##maf version=1 scoring=roast.v3.3 a score=1365.000000 s hg38.chr19_GL949753v2_alt 0 1 + 796479 T s panTro4.chr19 58936492 1 + 63644993 T i panTro4.chr19 N 0 C 0 s rheMac3.chr19 59858196 1 + 64156825 T i rheMac3.chr19 N 0 C 0 s macFas5.chr19 54875173 1 + 59248254 T i macFas5.chr19 N 0 C 0 s papAnu2.chr19 46998026 1 + 51301725 T i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 46710962 1 + 50890351 T i chlSab2.chr6 N 0 C 0 a score=37821.000000 s hg38.chr19_GL949753v2_alt 1 15 + 796479 GTCAGTTGCTTGGTG s panTro4.chr19 58936493 15 + 63644993 GTCAGTTGCTTGGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102564661 15 - 106955855 GTCAGTTGCTTGGTG i nomLeu3.chr10 N 0 C 0 s rheMac3.chr19 59858197 15 + 64156825 GTCAGTTGCTTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875174 15 + 59248254 GTCAGTTGCTTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998027 15 + 51301725 GTCAGTTGCTTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710963 15 + 50890351 GTCAGTTGCTTGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281161 15 + 49145316 GTCATTTGCTTGATG i calJac3.chr22 N 0 C 0 a score=207591.000000 s hg38.chr19_GL949753v2_alt 16 86 + 796479 TGGTGAAGC--AATGAGAG--TGTTTTTTTCG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT s panTro4.chr19 58936508 86 + 63644993 TGGTGAAGC--AATGAGAG--TGTTTTTTTGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATTAGCATAAGAAATGTACTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798183 66 + 60714840 TGGTGAAGC--AATGAGAG--TGTTTTTTTGA-------GGAGAGGAGGTGTCAGATAGATCAAGAATT--------------------TACTTCTT i ponAbe2.chr19 N 0 C 0 s nomLeu3.chr10 102564676 86 - 106955855 TGGTGAAGC--AATGAGAG--TGTTTTTTTGC-------GGGCAGGAGGTGTCGGATAGATCAAGAATTTATAATAAGCATAAGAAATGTACTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858212 87 + 64156825 TGGTGAAGC--AATGAGAGG-TTTTTTTTCGG-------GGGGAGGAGGTGTcagatagatcaagaatttataataagcatcagaaatgtacttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875189 87 + 59248254 TGGTGAAGC--AATGAGAGG-TTTTTTTTGGG-------GGGGAGGAGGTGTCAGATAGATCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998042 87 + 51301725 TGGTGAAGC--AATGAGAGG-ttttttttGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46710978 88 + 50890351 TGGTGAAGC--AATGAGAGGTTTTTTTTTGCG-------GGGGAGGAGGTGTCAGATAGTTCAAGAATTTATAATAAGCATCAGAAATGTACTTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281176 91 + 49145316 TGGTGAAGCCAAATGAGAG--TGATTTTTGGGGGGGGCTGGGGAGGAGGTGTCAGA----TCAGGAATTTAAAATAAACGTAAGAAATGTACTTCTT i calJac3.chr22 C 0 I 462 a score=5096.000000 s hg38.chr19_GL949753v2_alt 102 2 + 796479 AA s panTro4.chr19 58936594 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798249 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564762 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858299 2 + 64156825 aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875276 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998129 2 + 51301725 AA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711066 2 + 50890351 AA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45281267 462 + 49145316 I a score=2656698.000000 s hg38.chr19_GL949753v2_alt 104 990 + 796479 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-----------ttagcccagtgt-ggtggtgcacacctgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgtgtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATACTAAAA-----AAGGACACATATTAGCAATATGAAACAAGAACAATTTTCCATAAAGCAAGAGGCTTATGGAAATAAAAAGTATAAAAATACATGATGGTAAA---AAATATATAACATTATCCTCTAACAGAATAGGCAGTAGGGTgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctcttt-aaaaaaaaaaaaaaaaAAGGC---------------AGAATTGATACAGCTGAAG--AAAAATGAACAAGTAAGAAAATGTGGTGGAGGAACTTCTCCAGGAAGCTGATATAATTATATTAAGATCAGAAAAAAT---AAGAGAAAAGTCATCGTACGAT---------ATAAGGGACAGGTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagtgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccagcc s panTro4.chr19 58936596 986 + 63644993 CAAAGccagcctgggcaacatagtgagattcccatctct--acaaaa--aaaaaaaaaaaaaaa-------aaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaagaaaaaaaaagaaaCATAcaaaaa-----aaggacacatattagcaatgtgaaacaagaacaattatccataaagcaagaggcttatggaaataaaaagtataaaaatacatgatggtaaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtctctt---------aaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagat---------ataagggacagCTGTTTCTCAAAATCCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgccccggctggagtgcagtggtgcgatctcagctcactgcaaactccacctcccagattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgaatttttagtagagacggggtttccccatgttggtcaggctggtctcaaactcctgacctc--gtgattcgcccacctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55798251 1006 + 60714840 AAAAGccagcctgggcaacatagtgagattcccatctct--actaaa--aaaaaaaaaaaagaaaaagaaaaaaattagcccagtgt-ggttgtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagcctgggaggtcacggctgcagtgagctgtgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCATACTAAAAAAGATAAGGACACATGTtaacaatgtgaagcaagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatacatgatagtaaa---aaatatataacattatcctctaatacaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggatgatcacttgagaccaggagttcaagaccagtctgggcaacatgatgagaccgtgtctcttt-aaaaaaaaaaaaaaaaaaggc------------agtagaattgatacagctgaagaaaaaaatgaacaagtgagaagatgtagtggaggaacttctccaggaagctgatcta-----attaatatcagaaaaaataagaagagaaaagccatcgtaagat---------gtaaggaacagCTGCTTCTCAAAATCCAAAATCTTCTCTACTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccaaattcaagcgattctcctgcctcagcctccccagtagct-ggattacaggggctcgccaccacacccagctaatttttgaatttttagtaagagatgggtttcaccatgttggtcagg-tggtctc-aactcctgacctc--gtgaatcacccacctcagcctcccaaagtgctgggattacaggactgagccactgcacccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102564764 997 - 106955855 AAAAGccagcctgggcaacatagtgagattcccatctct--accaaa--aaaaaaaaa-----------------ttagcccagcgt-ggtggtgcacacctgtggccccagctactcgggaggctgaggcaggaggattgcttgagccagggaggtcaaggctgcagtgagctatgattgtgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-aaaaaaaagaaaCatactaaaaaagataaggacacatgctagcaatgtgaagcaagaacaattatccataaagcaaggggcttctggaactaaaaagtataaaaatacacgatggttaa---aaatatataacattatcctctaacagaataggcagtagggtgggtgccatggctcacgcctataatcccagcagtttgagaggctgaggtgggatgatcacttcagaccaggagttcgagaccagtctgggcaacatggtgagaccgtgtgtcttt-aaaaaaaaaaaaaaaaaaggc---------------agaattgatacagctgaag--aaaaatgaacaagtaagaaaatgtggtggaggaacttctccaggaagctgatataattatattaacatcagaaaaaat---aagagaaaagccatcgtaagatatatataagataagagACAGCTGTTTCTCAAAAACCAAAATCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctagagtgcagtggtgcaatctcagctcactgcaaactccacctcccagattcaagcgattcttctgcctcagcctccccagtagct-ggattacaggtgctcgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcaaattcctgacctg--gtgattcacccacctcagcctcccaaagtgctgggattacaggcctgagccaccacacccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59858301 984 + 64156825 aaaagccagcctgggcaacatggcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaaggggcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctcaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctcttt-aaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgctgagattactggcatgagccaccacgcctggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54875278 985 + 59248254 AAAAGccagcctgggcaacatagcgagattcccatttct--accaaa-----------aaaaaa-----------ttagcccagcgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggttgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaacaa-aacaattatccataaagcaagggtcttatggaaataaaaagtataaaaa-atatgatggtaaa---atatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgagaggctgaggtgggacgatcccttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaaggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgatataattatattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTGTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcacccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattcccctgcctcagcctcccaagtacctgggattataggcgctcgcaaccacacccaggtaatttttgaatttttagtacagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcttcccaatgtgcttagattactggcatgagccaccacgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46998131 1000 + 51301725 Aatagccagcctgggcaacatagcgagattcccatctct--accaaa--aaaaaccccaaaaaa-----------ttagcccaccgt-ggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgaggctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctgggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaacatactaaaaaaGATAAGGACAC--GTTAGCAATGTGAAATAAGAACAATTATCCATAAAGCAAGGGgcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtaTCCTCTGATAGAATAGGCAGTAGggtgggtgccgtggctcacgcctgtaatcccagcactttgagtggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctttaaaaaaaaaaaaaaaaaaagggggggga-----caGTAGAACTGATACagctgaag--aaaaatgaacaagtaaGAAGATGTGGTGGAGGAACTTCTCCAGGAAGctgataaaattatattaatatcagaaagaAT---AGGAGAAAAGCCATCGTAAGAT---------ATAAGGGACAGCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAatcctgattttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcgattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattggtcaggctggtctcaaactcctgacctt--gtgattcgcccacctcagcctcccaatgtgctgagattactggcatgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46711068 999 + 50890351 AAAAGccagcctgggcaacatagcgagattcccatctactaaccaaaaaaaaaaaaaaaaaaaa-----------agaacccaccgtgggtggtgcacacatgtggccccagctacttgggaggctgaggcaggaggattgcttgagcctgggaggttaaggctgcagtgagctatgattgcgccactgcactccagtctaggtgac-agtgcaagaccctgtctcaaaaaataaaaag-----aaaataaaCatactaaaaaagataaggacacatgttagcaatgtgaaataagaacaattatccataaagcaaggggcttatggaaataaaaagtataaaaatatatgatggtaaa---aaatatataacagtatcctctgatagaataggcagtagggtgggtgccgtggctcacgcctgtaatcccagcactttgaaaggctgaggtgggacgatcacttgagaccaggaatttgagaccagtctgggcaacatggtgagactgtgtctctt--aaaaaaaaaaaaaaggggggg-----------cagtagaattgatacagctgaag--aaaaatgaacaagtaagaagatgtggtggaggaacttttccaggaagctgataaaattctattaatatcagaaagaat---aggagaaaagccatcgtaagat---------ataagggacagCTGTTTCTGAAAATCCAAACTCTTCTCTGCTAAGAGAATCCTGAttttgtttttgtttttgtt---tcttgagatgcagtcttgctc-tgtcgcccaggctggagtgcagtggtacaatctcgactcatggcaaccttcacctcccagattcaagcaattctcctgcctcagcctcccaagtacctgggattataggcactcacaaccacacccaggtaatttttgaatttttagtagagacggggtttcaccatattgctcaggctggtctcaaactcctgacctt--gtgattcgcccaccttagcttcccaatgtgctgagattatcggcatgagccaccacgcctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45281729 943 + 49145316 cgagaccatcctggtcaacatggtgaaa-ccccgtctct--actaaa------aatacaaaaaa-----------ttagctgggcat-ggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcagaggttgcggtgagccgagattgcgccattgcactccagcctgggtaacaagagtgaaactccgtctcaaaaaaaaaaaaa-----aaaagaaTGA-----------GTAAGAACACATGTTAGC----------------------------------------------------AGTATAAAAATATATGATGGTAAACATATATATATAACATTATCCTCTAATGGAATAGGCAGGAGGGTgagtgcggtggctcacacctgtaagcctagcactttgagaggctgaggtgggaggatcacttgagaccaggagttcaagaccagtctgggcaacatggtgagaccttgtctcttt-aaaaaaaaaaaaaaaaGAAGAAGAAGACTAGGCAGTAGAATTGATACAGCTGAAG--AAAATTGAGCAAGCGAGAAAAC---GTGGAGGTGCTTTTCCAGGAAGCTGATATGTTAATATCAGAAAAAGGAAGAATAAGAAGAGACAAGCCATGGTAAAAT---------AGAAGGGACAGCTGCTTCTCAAAATCCAAAATCTTCTCTG---AGGATATCCTGAttttctttttgttttttttttcttttgaggtggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcaccgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctcccgagtagctgggattacaggcatgcgccaccgtgcccagctaa-ttttgcatttttagtagaggcagggtttcaccatgttggtcaggct-gtcttgaactcccaacctcaggtgatctgcccacctcggcctcccaaaatgctgagattacaggcgtgagccaccatacccggcc i calJac3.chr22 I 462 I 316 a score=1488255.000000 s hg38.chr19_GL949753v2_alt 1094 572 + 796479 GagaaccctgattttgttcaggtgtcagttggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccacc----ccagacctactgaatcag--tcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACTCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg s panTro4.chr19 58937582 574 + 63644993 GagaaccctgattttgttcaggtgtcaggtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttgtgaaagtgtggtccctgaaccagcagcgtcagcatcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacttactgaatcagagtcagaaactctgaaggcgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactgaagtttaaacaccTTTAGCCCAGTTAGGTAAACGCACGCCCACTGCTAGTGGTTATTTAAGGAAGGGGCTGGATGCAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTATGCCCTTCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttgta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799257 574 + 60714840 GagaaccctgattttgttcaggtatcaagtggccacccttgttccttggagacttggcccttttctagtttcaggcatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcttcagcatcacctgggagctcgtcataaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgaaggtgagcttttcctttctcctcctctccaacctatggtttgacaagtcctccaggtgattctgatgcacactaaagtttaaacactTTTAGCCCAGTTAGGTAAACTCATGCCCACTGCTAGTGCTTACTTAAGGAAGGGGCTGGATACAATTGTGTTTCTTGAGATGTGAGTGGAAATCTCGTGGGAGGCTTCCTCATGTTGGAGAGGGCCACGTTGGAAGGGCCTTTCTATGCCCTTTGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACttttta----tttatttatttgagacagagtcttgctcttgtcgcccaggctggagtgtagtggcgcgatctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102565761 557 - 106955855 Gagaaccctgattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccttttctagtt-----------tcttgattactctaagGCTTAGTAACGTGCtgatttggaaaatgtggtccctgaaccagcagcctcagcctcacctgggagctcgtcagaaaggcaaattcttgagccccact----ccagacctactgaatcagagtcagaaactctgacagttagcttttcctttctcctcctctccaacctgtggttggacaagtcctccaggtgattctgatgcacactaaagtttaaacacTTTCAGCCCAGTTAGGTAACCTCACGCCCACTGCTAGTGGTTACTTAAGGAAGGGGCTGGATGCAAT--TGTTTCTTGAGATGTGAGTGGGAATCTCGTGAGAGGCTTCCTCATGTTGGAGAGGGCCGCGTTGGAAGGGCCTTTCTACGCCCTTCGTCTGCTTTTTAGCTCATCCTTTCCAAAAAATTAACtt--------tttatttatttcagacagagtcttgctcttgtcgcccaggctggagtgcagtggcgcgatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59859285 566 + 64156825 GagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaagGCTTAGTGACGTGCtggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccGTTAGCCCAGTTAGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGTGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876263 566 + 59248254 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagctcatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaactctgaaggcgagcttttcctttttcctcctctccaacctatagtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacaccgttagcccagttaggtaacctgacacccagtgctagtgatcatttaaggaaggggctggatgcaagtgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGG-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgctgcccaggctagagtgcagtggcgcgatcttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999131 566 + 51301725 gagaaCCCTGATTTTGTTCAGGTGTCAACTGGCCACGCTTGTTCCTTGGAGACTTGGTCCTTTTCTAGTTTCAGGTATGAATCTTGATTAGTCTAAGGCTTAGTGATGTGCTGGTTCTGAAAGTGTGGTCCCTGAACCAGCAGCGTCAGCATTACCCGGGAGCTCATC----AGGCAAATTCTTGAGCCCCACCCACGCCAgccctactgaa------tcagaaactctgaaggcgagcttctcctttttcctcctctccacCCTATGGTTTGacaagtcctccaggtgattccgATGCACGCTAAAGTTTAAACACTGTTCGCCCAGTTCGGTAACCTCACACCCAGTGCTAGTGATCACTTAAGGAAGGGGCTGGATGCAAGCGTGTTTCTTGAGATGTGAGTGGAAATCTCATGGGAGGCTTCCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CCATGCCCGTCGTCTGCTTTTTATCTCATCCTTtccaaaaaattaactttttatgtctttatttttttgagatgaagtcttgtt-gtgttgcccaggctggagtgcaggggcgcgatcttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712067 566 + 50890351 Gagaaccctgattttgttcaggtgtcaactggccacccttgttccttggagacttggcccttttctagtttcaggtatgaatcttgattagtctaaggcttagtgacgtgctggttctgaaagtgtggtccctgaaccagcagcgtcagcattacccgggagcttatc----aggcaaattcttgagccccacccacgccagccctactgaa------tcagaaagtctgagggcgagcttttcctttttcctcctctccaccccatggtttgacaagtcctccaggtgattctgatgcacgctaaagtttaaacactgttcgcccagttaggtaacctcacacccagtgctagtgatcacttaaggaaggggctggatgcaaacgtgtttcttgagatgtgagtggaaatctcatgggaggcttcCTCATGTTAGAAAGGGACGCCTTGGAAAGA-----CTATGCCCATCGTCTGCTTTTTATCTCATCCTTTCCAAAAAATTAACtttttatgtatttatttttttgagatgaagtcttgct-gtgttgcccaggctggattgcagtggcgcgatcttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45282988 468 + 49145316 GGgaaaccggattttgttcaggtgtcaagtggccacccttgttccttggagacttggcccctttctagtctcaggcatgaatcctgatgcgtctaagGCTTAGCGACATGCtgattcagagagtgtagcccctgagcaagcagcatcagcgtgacccgggagcttgtcagaacggcaaatccttgagcccctct----ccagacctatggaa------tcag--actctgcgggtgagcttttcctttttcctcctctccaagctgtggtttcacaagttctccaggcaattctgacgcaccctgaagtttaaACACT-CGAGCCCAGTTAGGTAACCCCACACTTACTGCTAGTGATGAC-TAAGGAAGGGGCTGGACGCAGCTGTGTTTCGGGAGATTTAAGTGGAAACCt-----------------------------------------------------------------ttttt-----------------------------------tttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgtgatcttg i calJac3.chr22 I 316 C 0 a score=206234.000000 s hg38.chr19_GL949753v2_alt 1666 87 + 796479 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat s panTro4.chr19 58938156 87 + 63644993 gctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcacctgctactat i panTro4.chr19 C 0 I 314 s ponAbe2.chr19 55799831 87 + 60714840 gctcacggcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccaagtagctggggctacaggcacctgctactat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859851 87 + 64156825 gctcacttcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876829 87 + 59248254 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacgggcacctgctactat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999697 87 + 51301725 gctcactgcaacctccacctcctgggttccagcaattcttctgcctcaacctcccgagtagctgggactacaggcacctgctactat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712633 87 + 50890351 gctcactgccaccttcacctcctgggttccagcaattcttctgcctcaacctcccaagtagctgggactacaggcacctgctactat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283456 87 + 49145316 gctcacagcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcaggcgccaccgt i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=12894.000000 s hg38.chr19_GL949753v2_alt 1753 5 + 796479 gccca s panTro4.chr19 58938557 5 + 63644993 gccca i panTro4.chr19 I 314 C 0 s ponAbe2.chr19 55799918 5 + 60714840 gccca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859938 5 + 64156825 gccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54876916 5 + 59248254 gccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999784 5 + 51301725 gccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46712720 5 + 50890351 gcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45283543 5 + 49145316 gccca i calJac3.chr22 C 0 I 306 e nomLeu3.chr10 102566318 0 - 106955855 C a score=1009888.000000 s hg38.chr19_GL949753v2_alt 1758 450 + 796479 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagcgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaagtttttaaaaattagcatttgcctgtgcgtccagcttctcaggaagctgaggcgggaggatcacttgagcttaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCGTGAGACACCACTCCAGGTCTGGGttctct-----ttttttttttttt s panTro4.chr19 58938562 453 + 63644993 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggcattacaggagtgagccacctcacctggcTTAACTTTTTATTTTAAAATAGTCCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgtttaagaccagcctgggcaacatggcaaaaaatcccatctctacaaaaaattttttaaaaattagcatttgcctgtgtgtccagcttcttgggaagctgaggtgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACTCCAGGTCTGGGttctct----cttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55799923 455 + 60714840 gctaa-tttttgtattttccgtagagacagggcttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctgggattacaggaacgagccacctcacctggctTAACTTTTTATTTTAAAATAGTTCTGGAggccaggtgtggcagctcacgcctataatcccag--cactttgggagtctgaggcagaaggatctcttgagcccaggtgttcaagaccagcctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcatttgcctgtgcgtccagcttcttgggaagctgaggcgggaggatcacttgagcctaggaggtcaaggctgcagtgagACACCATACTGGGATTACAGGCATGAGACACCACACCAGGTCTGGGTTCCCttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59859943 449 + 64156825 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctggcattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaatttttaaaaaattagcattcgcctgtacatccagctactttggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----TTTTTTTTTTTTT i rheMac3.chr19 C 0 I 569 s macFas5.chr19 54876921 444 + 59248254 gctaa-tttttgtatttttagtagagacagggcttcaccatgttgcccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagctacctcacctggcTTAACTTTTTATTTTAAAACCATTCTGGAggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctgtacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGttct-----tttttttt----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 46999789 449 + 51301725 gctaa-tttttgtatttttagtagagacaggacttcaccatgttggccaggctggtctcaaacccctgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattacaggagcaagcTACTTCACCTggcttaactttttattttaaaaccgttctggaggccaggtgtggcggctcatgcctataatcccag--ctctttgggagtctgaggcagaaggatcac-tgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgCCTGTacatccagctacttgggaagctgaggcgggaggatcacttgagcctgggaggtcaaggctgcagtgagacaccatgctgggaatacaggcatgagacactacTCCAGGTCTgggggttct-----ctctctctctttt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46712725 452 + 50890351 gctaa-tttttgtatttttagtagagacagggcttcaccatgttggccaggctggtctcaaaccactgacctcaagtgatctgcccacctgtgcctcccaaagtgctgggattataggagcaaaccacctcacctggcTTACCTTTTTATTTTAAAACAGTTCTGGAggccaggtgtggcggctcatgcctataatcccagctctctttgggagtctgaggcagaaggatcacttgagcccaggtattcaagaccaacctgggcaacatggcaaaa--tcccatctctacaaaaaattttttaaaaattagcattcgcctatacatccagctacttgggaagctgaggtgggaggatcacttgagcctgggaggtcaaggctgcagtgagACACCATGCTGGGAATACAGGCATGAGACACCACTCCAGGTCTGGGGGTTCT-----CTCTTTTTtttgt i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45283854 444 + 49145316 gctaattttttgtatctttagttgagatggggtttcaccatgttggccaggctggtcttgaactcctgacctc--gtgatctgcctgcctcggcctcccagcatgctgggattacaggagcaagccgcctcacctggccTGACATTTTATTTTAAAATCGTTCTGGAgaccaggtgtggcaactcatgcctgtaattccag--cactttgggagtctgaggcagaagggtcacttgagcccaggtgttaaagaccagcctgggcaatttggcaaaa--ccccatctctacaaaaagtttttaaaaaattagtgttcacctgtacttccagctacttgggaggctgaagaaggaggatcacttgagcccaggaggtcaaggctgtcgtgaaccACCATGCTGGGATTACAGGCATGAGGCATCACTTGAAGTCTTGGGttctc-----tttttttt----- i calJac3.chr22 I 306 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C a score=287241.000000 s hg38.chr19_GL949753v2_alt 2208 173 + 796479 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggcaccatcttggctcacagcaacctccaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA s panTro4.chr19 58939015 173 + 63644993 tttttttgagacagagtctcactctttcgcccaggctgcaatgaagtggtgccatcttggctcacagcaacctgcaccccgcagattcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccaccaccaagcctggctaatttttatattttAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800378 172 + 60714840 tttttttgaaacagaatctcactctttcgcccaggctgcaatgaa-tggcaccatcttggctcacagcaacctccaccccgcaggttcaagcgattctcctgcctcagcctcctgagcagctgggattacaggcgcccgccaccaagcctggctaatttttatattttAGAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877365 171 + 59248254 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47000242 171 + 51301725 tttttttgagacag--tctccctctttcgcccaagctggagtgaagtggcgtgatcttggctcactgcaacctccaccccccagattcaagtgattctcctgcctcagcctcctgagcagctaggattataggcgcccgccaccaagcctggctaatttttatattttagaga i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46713195 171 + 50890351 tttttttgagacag--tctccctcttttgcccaagctggagtgaagtggcgtaatctcggctcactgcaacctccgccccacagattcaagtgattctcctgcctcagcctcctgggcagctaggattataggcacccgccaccaagcctggctaatttttatattttagaga i chlSab2.chr6 I 18 I 405 s calJac3.chr22 45284298 173 + 49145316 tttttttgaaatggagtctcactcttttgccaaggtgggagtgaagtggcacaatcttggctcactgcaacctctgcccccgaggttcaaggaattctcctgcttcagcctcccaagcagctgggattataggcacccaccaccaagcctggctaatttttgtattttagaga i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e rheMac3.chr19 59860392 569 + 64156825 I a score=180.000000 s hg38.chr19_GL949753v2_alt 2381 1 + 796479 T s panTro4.chr19 58939188 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800550 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45284471 1 + 49145316 c i calJac3.chr22 C 0 I 2412 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000413 0 + 51301725 C e macFas5.chr19 54877536 0 + 59248254 C e rheMac3.chr19 59860392 569 + 64156825 I a score=15155.000000 s hg38.chr19_GL949753v2_alt 2382 31 + 796479 gcccaggctggagtacagtggtgcgatctca s panTro4.chr19 58939189 31 + 63644993 gcccaggctggagtacagtggtgcgatctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800551 31 + 60714840 gcccaggctggagtacagtggtgcgatctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54877536 18 + 59248254 -------------cgcggttttgccacgttg i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47000413 18 + 51301725 -------------cgcggttttgccatgttg i papAnu2.chr19 C 0 I 5 s calJac3.chr22 45286884 31 + 49145316 gtccagactggagtgcaatggtacaatctca i calJac3.chr22 I 2412 C 0 e nomLeu3.chr10 102566318 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=130378.000000 s hg38.chr19_GL949753v2_alt 2413 112 + 796479 gctcaacacaacctccacctcccggattcaagtgattctcctgcctcagcctccccattagctgagattacaggcatgcaccaccacgcccggctaa--ttttgtatttttagt s panTro4.chr19 58939220 111 + 63644993 gctcaacacaacctccacctcccgggttcaagtgattctcctgcctcagcctccccgttagctgagattgcaggcatgcaccaccacgcccggcta---ttttgtatttttact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800582 112 + 60714840 gctcaacacaacctccacctcccgggttcaagtgattctcctacctcagcctccccattagctgagattacaggcatgtgccaccacgcccggctaa--ttttgtatttttagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566318 112 - 106955855 gctcaacataacctccacctcccaggttcaagcgattctcctgcctcagcctccccagtagctgagattacaggcatgcgccaccacacctggctca--ttttgtatttttagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877559 112 + 59248254 gctggcctcaaactcaaactcctgacctcaaatgatccgcccgcctctgcctctgaaagtgctgggattacaggcatgagccaccgtgcccCGACGG--TTCTGTTTTTGTAAT i macFas5.chr19 I 5 I 1 s papAnu2.chr19 47000436 112 + 51301725 gctggcctcaaactcaaactcctgacctcaagtgatctgcccgcctctgcctccaaaagtgctgggattacaggcgtgagccaccacgccccgacGG--TTCTGTTTTTGTAAT i papAnu2.chr19 I 5 I 978 s calJac3.chr22 45286915 113 + 49145316 gctcaccacaacc-ctgcctcctcgtttcaagcaattcgcctgcctcagcctcccaagtagctggggttacaggcgcccgccaccacgcttggctagattttgatatcgttagt i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e rheMac3.chr19 59860392 569 + 64156825 I a score=18620.000000 s hg38.chr19_GL949753v2_alt 2525 25 + 796479 agag-acagg---gtttctctgtgttggt s panTro4.chr19 58939331 25 + 63644993 agag-acagg---gtttctctgtgttggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800694 25 + 60714840 agag-acagg---gtttctttatgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566430 25 - 106955855 agag-acggg---gtttctccaggttggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877672 29 + 59248254 AGCGCACAGGTTCATTTTTCTGTGTAAGT i macFas5.chr19 I 1 I 202 s calJac3.chr22 45287028 25 + 49145316 agaa-atggg---gtttcaccatgttgac i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=294344.000000 s hg38.chr19_GL949753v2_alt 2550 387 + 796479 caggttggtctccaattcctgacctccggtgatctgcctgcctcggcctcccaaagtgctgggattacgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTGTGCACTTATTCATGAGCTTTTTTTTTTTTT-ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATACCCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAAGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT s panTro4.chr19 58939356 388 + 63644993 caggttggtctccaattcccgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattatgggtgtgagccactgtgcccggcTGATCTTACATTTTCTTATGCACTTATTCATGAGCTTTTTTTTTTTTTTATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTCATATGCAGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTATAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAAATGCTGAAAACCTAATTTCCCCACACGCTTGGCCTCTTGTCCACCTGAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55800719 377 + 60714840 caggttggtctccaactcccgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattctgggcgtcagccactgcgcccggctGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTA--ATGAAAATGAATTCCTACCATCCATTCTCCTTCCAAA-CTGCTC---------ATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTTAAAGTCGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGAGTACAGATGCCAGCGAGGTCAGATCTCACAGTAGGGCCATTTCTACGTGACTTCAGGAGAAGATGCTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566455 387 - 106955855 caggttggtctccaactcccgaccgcaggtgatctgcctgcctcggcctcccaaagtgctgggattacgggcgtgagccactgcgcccggcTGATCTTACATTTTCTCGTGCACTTATTCATGAGCTTTTTTTTTTTTA-ATGAAAATGAATTACTACCATCCATTCTCCTTCCAAA-CTGCTCATACGCGGTATTCCCAAGGTTTTTGCACATGTATATAACAGAATGTCAAAGTAGATTCATTGCAATCTCAGTTTCTGCTCAGGCCCAAAGATTACAGATGCCAGCAAGGTCAGATCTCACAGTAGGGCCATTTCTGCATGACTTCAGGAGAAGATACTGAAAACCTAATTTCCCCACACCCTTGGCCTCTTGTCCACCTGAAGGT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45287053 360 + 49145316 taggctggtctcaaactcatgacctcaggtgatccacccaactcgacctcccaaagtgctgggattacaggcatgagctaccatgccAGCCTGAGCTT----------------------------TTTTTTTTTTTTA-ATGAAAACGAATTCCTACCATCCATTCTCCTTCCAAAGCTGCTCATACACAGTATTCCCGTGGTTTTTGCACATTTATTTAACAGAATGTCAAAGTAGACTCATTGCGATCTCAGTTTCTGCTCAGGCCCAGAGATTACAGTTTCCAACGAAGTAGGATCTCACAGTAGGACCATTTCTGCATGACTTCAGGGGAAGATGCTGAAAAGCTAATTTCCCCACACCCTTTGTCTCTTGTCTGTCCGAAGCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=5955.000000 s hg38.chr19_GL949753v2_alt 2937 28 + 796479 AAGAAAGGAGTGTtggggggaaggggga s panTro4.chr19 58939744 28 + 63644993 AAGAAAGGAGTGTtggggggagggggga i panTro4.chr19 C 0 C 0 s calJac3.chr22 45287413 28 + 49145316 AGGAAAGGAGTGTTGAGATTAGGGGAGA i calJac3.chr22 C 0 I 1294 e ponAbe2.chr19 55801096 0 + 60714840 C e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=17229.000000 s hg38.chr19_GL949753v2_alt 2965 188 + 796479 gggatagcattaggagatatacctaatgctaaatgacgagttagtgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataataataaaataaaataaaaataaataaataaataaaaattaaaaaaagaaaaaaaa s panTro4.chr19 58939772 188 + 63644993 gggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcagcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaagttaaagtataataataataaaataaAATaaaaataaataaataaataaaaattaaaaaaagaaaaaaaa i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 55801096 0 + 60714840 C e calJac3.chr22 45287441 1294 + 49145316 I e nomLeu3.chr10 102566842 0 - 106955855 C e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e macFas5.chr19 54877701 202 + 59248254 I e rheMac3.chr19 59860392 569 + 64156825 I a score=814.000000 s hg38.chr19_GL949753v2_alt 3153 5 + 796479 aagaa s panTro4.chr19 58939960 3 + 63644993 aa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801096 5 + 60714840 AAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102566842 5 - 106955855 AAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54877903 5 + 59248254 AAGGT i macFas5.chr19 I 202 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e chlSab2.chr6 46713366 405 + 50890351 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=34363.000000 s hg38.chr19_GL949753v2_alt 3158 33 + 796479 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC s panTro4.chr19 58939963 33 + 63644993 aGGAGTGTTGAGATTAGAAGGTATTTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801101 33 + 60714840 AGGAGTGTTGAGATTAGAAGAttttttttttcc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102566847 33 - 106955855 AGGAGTGTTGAGATTAGAAGATAttttttttcc i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 54877908 31 + 59248254 AGGAGTGTTGCAATTAGAAGAtttttttttc-- i macFas5.chr19 C 0 I 7 s chlSab2.chr6 46713771 31 + 50890351 AGGAGTGTTGAAATTAGAAGAttttttttcc-- i chlSab2.chr6 I 405 I 6 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I e rheMac3.chr19 59860392 569 + 64156825 I a score=256941.000000 s hg38.chr19_GL949753v2_alt 3191 155 + 796479 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa s panTro4.chr19 58939996 156 + 63644993 TAttgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgtagccatcacccaagcagtatacactgcaccccatttatagtcttttatccctcgcccccctctcacctttccccaccaagtccccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801140 155 + 60714840 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagattgtggtgcagccatcacccaagcagtatacactgcaccctattcatagtcttttatccctcgcccccctctcacctttcccc-ccaagtccccaa i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102566886 155 - 106955855 tattgggatacaggtggtgtttggttgcatgagtaagttctttagtggtgctttgtgagatcgaggtgcagccatcacccaagccgtatacactgcaccctattcaaagtcttttatccctcgcccccctctcacctttcccc-ccaagtgcccaa i nomLeu3.chr10 I 6 C 0 s rheMac3.chr19 59860961 147 + 64156825 tattgagatacaggtggtgtttggttgcatgagtaagtttttttg--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i rheMac3.chr19 I 569 C 0 s macFas5.chr19 54877946 147 + 59248254 tattgagatacacgtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatccctcgccccccttccaccttttacc-ccaagtccccaa i macFas5.chr19 I 7 C 0 s chlSab2.chr6 46713808 147 + 50890351 tatcgagatacaggtggtgtttggttgcatgagtaagttctttag--------tgtgagattttggtgcacccatcacccaagcagtatacactgcaccttatttgtagtcttttatcccttgccccccttccaccttttacc-ccaagtccccaa i chlSab2.chr6 I 6 C 0 e calJac3.chr22 45287441 1294 + 49145316 I e papAnu2.chr19 47000548 978 + 51301725 I a score=236373.000000 s hg38.chr19_GL949753v2_alt 3346 104 + 796479 agtccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccattcctgagtt-acttcactt s panTro4.chr19 58940152 104 + 63644993 agtccattgtatcattcttatgcctttgcatcctcagagtttagctcccacatgtcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801295 105 + 60714840 agaccattgtatcattcttatgcctttgcatcctcatagtttagctcccacatatcagtgagaacatatgatgtttggttttccactcctgagttaacgtcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567041 104 - 106955855 agaccattgtatcattcttatgcctttgcatcttcatagtttagctcccacatatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861108 104 + 64156825 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878093 104 + 59248254 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacgatgtttggttttccattcctgagtt-acttcactt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46713955 104 + 50890351 agtccattgtatcattcttatgcctttgcgtcctcatagtttagctcccacttatcagtgagaacatacaatgtttggttttccattcctgagct-acttcactt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856875 100 - 49145316 agcccattgtgtcattcttatgtctttgtgtcctcataacttagctctcacttatgagtgagaacat---atgcttggtttt-tgttcctgagtt-acttcactt i calJac3.chr22 n 1294 C 0 e papAnu2.chr19 47000548 978 + 51301725 I a score=120754.000000 s hg38.chr19_GL949753v2_alt 3450 43 + 796479 agaataatagtctccaGAGATTAGAAGAGTttttgttttgttt----- s panTro4.chr19 58940256 41 + 63644993 agaataatagtctccaGAGATTAGAAG--TTTTTGTTTTGTTT----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801400 43 + 60714840 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102567145 43 - 106955855 agaataatagtctccaGAGATTAGAAGAGTTTTTGTTTTGTTT----- i nomLeu3.chr10 C 0 I 3415 s rheMac3.chr19 59861212 43 + 64156825 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878197 43 + 59248254 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001526 43 + 51301725 agaataatagtgtCCAGAGATtagaagagtttttgttttggtt----- i papAnu2.chr19 I 978 C 0 s chlSab2.chr6 46714059 43 + 50890351 agaataatagtctccaGAGATTAGAAGCGTTTTTGTTTTGGTT----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3856975 48 - 49145316 agaataatactttccaGAGATTAGAAGCGTTTTTGTTTGGTTCTGTTC i calJac3.chr22 C 0 C 0 a score=12075.000000 s hg38.chr19_GL949753v2_alt 3493 5 + 796479 tgttt s panTro4.chr19 58940297 5 + 63644993 TATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801443 5 + 60714840 TGTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59861255 5 + 64156825 TGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878240 5 + 59248254 TGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001569 5 + 51301725 tgttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714102 5 + 50890351 TGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857023 5 - 49145316 TGTTT i calJac3.chr22 C 0 C 0 e nomLeu3.chr10 102567188 3415 - 106955855 I a score=1110817.000000 s hg38.chr19_GL949753v2_alt 3498 366 + 796479 ctgtgtgtttgtttACGTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGTCCACCGTAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGTCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcgtttggcaagttcctcctttgcttgctcttctctctctcttgttgccttgtg s panTro4.chr19 58940302 366 + 63644993 CTGTGTGTTTGTTTACGTAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGATGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCTCatatggtttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattgaatcatggaggtggcttctaccttgttgttctcatgata--aagtgagttctcaggagatctgatggttttataagcatttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801448 368 + 60714840 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGTTGTGAGTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATGGGGTCtgatatggtttggctttatgtccccacccaaatctcatcttgaatgataatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcttctgccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570603 368 - 106955855 CTGTGTGTTTGTTTACATAAGCTGTTGGTGTGCTGTGACTCCCATCCTCTGTCCACCATAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACAATTCAGAGTAGTTATATGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttctgtccccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcacggaggtggcttctaccttgttgttctcgtgatagcaagtgagttctcaggagatctgatggttttataagtgtttggcaagttcctcctttgcttgctcttctctctctcctgttgccttgtg i nomLeu3.chr10 I 3415 C 0 s rheMac3.chr19 59861260 368 + 64156825 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGAAGGGTGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctctcctgttgccttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54878245 368 + 59248254 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATAGGGTCtgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggctagctcctcctttgcttgctcttctctctcttctgttgccttgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001574 368 + 51301725 ctgtgtgtttctttACCTAAGCTGTTGGTGTGCTGTGAGTCCCATCCTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTCCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAATagggtctgatatggtttggctttgtgtccccatccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgtccaccatgctgttctcatgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcgAGCTCCTCCTTTGCTTGCTCTTCTCTCGCTCCTgttgccttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714107 368 + 50890351 CTGTGTGtttctttacataagctgttggtgtgctgtgagtcccatccTCTGGCCACCACAGGTGTGTGATGGAGGATGACAGTCTCTTCAACTGGACGATTCAGAGTAGTTATGTGGGGTGAGGGGCGGGCCCAGAGAGGAACAGGGTCtgatatggtttggctttgtgttcccacccaaatctcatcttgaattgtaatccccaggtgttgggggaggaacctggtgggaggtgattggatcatggaggtggcgttcaccatgctgttcttgtgatagcaggtgagttctcaggagatctgatggttttataagtgtttggcaagctcctcctttgcttgctcttctctcgctcctgttgccttgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3857028 350 - 49145316 CTGTGTG----TTTACACAAGCTGTTAGTGTGCTGTGGGTCCTGTTTTCCATCCACCATAGGTGGGTGAT---GGATGACAGTCTCTTCAACTGGACAGTTCAGAGTAGTTACATGGGGCGAGGGGCGGGCCCACAGAGGAACAGGGTCtgatatactttggctttatgtccccacccaaatctcatcttgaattgtaatccccaggtgttggggcaggagcctggtaggaggtgattggatcgtggaggaggcttccaccatgctcctctcatgatagca-----------aggagacctgatggttttataagtgtttggcaaggtcctcttttgcttgctcctctctctctcctgctgccttgta i calJac3.chr22 C 0 n 0 a score=115692.000000 s hg38.chr19_GL949753v2_alt 3864 37 + 796479 aagaagatatttgcttctccttccccttctgccatga s panTro4.chr19 58940668 37 + 63644993 aagaagatatttgcttctccttccccttctgccatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801816 37 + 60714840 aagaagaaatttgcttctccttcgccttctgccatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102570971 37 - 106955855 aagaagatatttgcttctccttccccttctgtcatga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59861628 37 + 64156825 aagaagatatttgcttctccttccccttctgccatga i rheMac3.chr19 C 0 I 1040 s macFas5.chr19 54878613 37 + 59248254 aagaagatatttgcttctccttccccttctgccatga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47001942 37 + 51301725 aagaagatatttgcttctccttccccttctgccgtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46714475 37 + 50890351 aagaagatatttgcttctccttccccttctgccatga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45288735 37 + 49145316 aaaaagatacttgcttctctttcctcttttgccatga i calJac3.chr22 I 1294 C 0 a score=858063.000000 s hg38.chr19_GL949753v2_alt 3901 450 + 796479 ctgt-agtttcctgaggccaccctagccatgtggaattgtaagtcaattaaat-------ctctttct------ttt-----------------------------tttttt----------gagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagccggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccacacacggcctcggctatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCACTGgagagag-agggtgggaggagagagag--agggtgggaggggagagaggggaga-----------g s panTro4.chr19 58940705 470 + 63644993 ctgt-agtttcctgaggccaccctagccatgcggaattgtaagtcaattaaat-------ctcttttt------ttt-----------------------------ttttttt-ttttttttgagactgagccccc--ctgtcatccaggctggtgtgcagtggtgc-aatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcca----------------atagctggctaattttgtatttttagtagaggtggcg-ttcaccatgttgaccaggctagtctcgaactcctaacctcaagtgatccgcc--cacctcagcctcccaaagtgctaagattacaggtgt--gagccaccgcacacggcctcggatatttatagcagtgtgagaacgggctaacacaGGGTCTTTCCTCATTGGAgagag-agggtgggaggagagagag--agggtgggaggggggagaggggagaaatgggggagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55801853 461 + 60714840 ctgt-agtttcctgaggcctccccagtcacgcggaactgtaagccaattaaac-------ctcttttt------ttg-----------------------------tttgtttgtttgttttgagactgagcctca--ctgtcatcgaggctggggtgcagtggtgc-aatctcagctcgctgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgccc----------------ataccgggctaattttgtgtttttagtagtgatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgaaccgcc--cacctcagcctcccaaagtgctcagattacaggtgt--gagccaccacacacggcctcgggtatttatagcagtgtgagaacggactaacacaGGGTCTTTCCCCATTGgagagag-agggtaggaggagagagag--agggtgggaagggagagaggggaga-----------g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571008 458 - 106955855 ttgt-agtttcctgaggccaccccagccatgcggaactgtgagtcaatgaaaccatgaaacttttttt------ttt-----------------------------ttttttttttttttttgaaaatgaacctcc--ctgtcatccaggctggagtgcagtggtgcaaatctcaactcactgcaacctttgcctcccaggttcaagcgattctcctgcctcagcctaccgagtaactgggacaacaggcatgcgcta----------------ataccgggctaattttgtatttttagtagagatggcgtttcaccgtgttgaccaggctagtctcgaactcctgacctcaagtgatccgtccacacctcatcctcccaaagtgctaagattacaggcgc--gagccaccacacacagcctcgggtatttacagcagtgtgagaacagactaacacaGGGTCTCTACTCATTGGAGGGAG-AGGGTGGGAAgggaga---------------cggggagacggggag-----------a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54878650 457 + 59248254 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt-------------------------------------------ttttgttttttgagactgagcctca--ctgtcatgcaggctggagtgcagtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacactcggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagagaagggagaaaggggagagagagagggtgggagggaagagaggagaga-----------g i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47001979 469 + 51301725 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttt------ttt------------------tgtt-------ttttgttttgttttttgagactgagcctca--ctgtcatgcaggctggattgcagtggtgc-aatctcagttcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aAGCTACCACACTCGGCCTGGGATATTTATAGCAGTGCCAGAAGGGACTAACACAGGGTCTTTCCTCAttggggagagaagggagagaggggagagagagagggtgggagggaagagaggggaga-----------g i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46714512 474 + 50890351 ttgtaagtttcctgaggcctccccagccatgcagaactgtgagtcaattaaac-------ctcttttttttgttttt------------------tgtttt----gttttgttttgctttttgagactgagcctca--ctgtcatgcaagctggagtgcggtggtgc-aatctcagttcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctactgagtagctgggacaacaggcatgcgcca----------------acaccaggctaattttgtatttttagtagagatggagtttcaccatgttgaccaggctagtctcgaactcctgacctcaagagatccgcc--cacctcagcctcccaaagtgctcagattacaggcgc--aagctaccacacttggcctcggatatttatagcagtgcgagaagggactaacacaGGGTCTTTCCTCATTGgagagag-agggtgggaggggagagag---gggagagaagggagagaggggaga-----------g i chlSab2.chr6 C 0 I 264 s calJac3.chr22 45288772 452 + 49145316 gtgtaagtttcctgagggctctccagccatgcggaactgtgaatgcattaaac-------ctctttcc------ttcataaattacccagtctcaggtttttgtgtgtttgtttggtttttcgagactgagtctcactctgtcacccaggctgcagtgcagtggcac-gatctcagcttgctgcaacctctgcctcccatgttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgtaccaccatgcagggctaaccatgccaggctaattttctatttttaatagtgagggagtttcaccatgttgaccaggctggtctcaaactcctaacctcaagtggtccgtc--tacctcggcctcccaga-tgctgggattacaggtgcgagagccaccacacacagtcttgggtatttatggcagcgtgagaatggactagtacaGG-------------GGAGAGAG----------------------------------------------------------- i calJac3.chr22 C 0 C 0 e rheMac3.chr19 59861665 1040 + 64156825 I a score=3479.000000 s hg38.chr19_GL949753v2_alt 4351 9 + 796479 gggagaaat s panTro4.chr19 58941175 9 + 63644993 gggagaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802314 9 + 60714840 gggagaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571466 9 - 106955855 cggggagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879109 7 + 59248254 gggagag-- i macFas5.chr19 I 2 I 5 s papAnu2.chr19 47002450 7 + 51301725 ggaagag-- i papAnu2.chr19 I 2 I 454 s calJac3.chr22 45289224 9 + 49145316 AGCAGACCT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=12335.000000 s hg38.chr19_GL949753v2_alt 4360 27 + 796479 gggggag-ggggggagaggggggagaga s panTro4.chr19 58941184 28 + 63644993 gggggagcggggggagaggggggagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802323 28 + 60714840 gggggaaaggtgggagagcggggagaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571475 17 - 106955855 gggggag-----------agggaggtga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54879121 26 + 59248254 gggtggg-ag-ggaagagaggggagaga i macFas5.chr19 I 5 I 293 s papAnu2.chr19 47002911 27 + 51301725 gggagag-agagggagagaggggagagg i papAnu2.chr19 I 454 C 0 s calJac3.chr22 45289233 12 + 49145316 -------------GGGGTAGGGGAG--- i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3747.000000 s hg38.chr19_GL949753v2_alt 4387 10 + 796479 gaATGAATAT s panTro4.chr19 58941212 10 + 63644993 gAATGAATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802351 10 + 60714840 gAATGAATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571492 10 - 106955855 gaatgaatat i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47002938 5 + 51301725 ---tgacG-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45289245 5 + 49145316 -----AATAT i calJac3.chr22 C 0 C 0 e chlSab2.chr6 46714986 264 + 50890351 I e macFas5.chr19 54879147 293 + 59248254 I e rheMac3.chr19 59861665 1040 + 64156825 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 4397 1 + 796479 G s panTro4.chr19 58941222 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802361 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102571502 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862705 1 + 64156825 G i rheMac3.chr19 I 1040 C 0 s macFas5.chr19 54879440 1 + 59248254 g i macFas5.chr19 I 293 C 0 s papAnu2.chr19 47002943 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715250 1 + 50890351 G i chlSab2.chr6 I 264 C 0 s calJac3.chr22 45289250 1 + 49145316 G i calJac3.chr22 C 0 C 0 a score=422431.000000 s hg38.chr19_GL949753v2_alt 4398 132 + 796479 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccaagtggaggag--- s panTro4.chr19 58941223 132 + 63644993 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatccccaaggattcagtaa--------------tgtgaccgaggtgacgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55802362 133 + 60714840 AGAATGAATGTACCAGGAG----CTTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa-------------TTGTGACCAAGTGGAGGAG--- i ponAbe2.chr19 C 0 I 960 s nomLeu3.chr10 102571503 124 - 106955855 agaatgaATGTACCAGGAG----CGTTTAtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgacggatctccgagga----------------------tgtgaccaagtggaggag--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862706 136 + 64156825 AGAATGAATGTACCAGGAGCTGTCTTTTCtcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagccggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879441 136 + 59248254 agaATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47002944 136 + 51301725 AGAATGAATGTACTAGGAGCTGTCTTTTCTCCTTTGCAGGAGCGCCACCTGGAGGTAGGAGGTGAAGTCTGCAGAGAGAAGCTGGAAATGTACTGATGGATCCCCAAGGATTCAGTAA--------------TGTGACCAAGCAGAGGAG--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715251 136 + 50890351 AGAATGAATGTACCAggagctgtcttttctcctttgcaggagcgccacctggaggtaggaggtgaagtctgcagagagaagctggaaatgtactgatggatccccaaggattcagtaa--------------tgtgaccaagcagaggag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289251 132 + 49145316 GCAATGA----ACCAGGAGCTGTCTTTTATCCTTAGcaggagcgccacctggaggtaggaggtgaagtctgccgcgagaagctggaaatggactgacagatccccaagggttcagtaa--------------cgtgaccaaggagtggag--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19456713 143 - 122678785 AGAATGAATGAATCAGGT-----CTTTCTTGCTTTCCACCAGCGCCACCTGGAGGTGGAAGGTGAGCCCCGCAGAGAG--GCTGGAACTGTACAGATGGA-CCCCACAGACAGAGCAAGCCAACCTTCCAGCTGTG--CAGCTGGAGGAGGGA i canFam3.chr1 N 0 C 0 a score=506927.000000 s hg38.chr19_GL949753v2_alt 4530 194 + 796479 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagaggtctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGG--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCGAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt s panTro4.chr19 58941355 194 + 63644993 ctgcattt-------------------acaggca------------tcaaggg-aactgcaggtgagagatctgcagcCT------TGCAACAGAGTAG--GGGAAGCAGGAGAATCTCCACGTGG--GTAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaatcactgagctgacactgtatttttttcttgtatgtgacttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571627 195 - 106955855 ctgcattt-------------------acaggca------------tcgagggaaactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCAGGAGAAGCTCCACGTGA--GGAGATAAAGGAAAAGCTGACCACGCTTCCTCCACGTTGCAGGCAACCTGCCAAAAGGattttaattactgagctgacactgtatttttttcttgtatgtgacttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59862842 194 + 64156825 ctgcgttt-------------------acaggca------------tcagggg-aaccgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGGGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACACTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879577 194 + 59248254 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatctgcagcCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGT--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCATAAGGATTTTAATTACTGAGCTGACACTATATTTTTTTCTTGTATGTGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003080 194 + 51301725 CTGCGTTT-------------------ACAGGCA------------TCAGGGG-AACTGCAGGTGAGAGATCTGCAGCCT------TGCAAGAGAGTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCACGCTCCCTCCACGTTGCAGGCAACCTGCCAAAAGGATTTTAATTACTGAGCTGACACTATACTTTTTTCTTGTATGTGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715387 194 + 50890351 ctgcgttt-------------------acaggca------------tcagggg-aactgcaggtgagagatccgcagcct------tgcgagagagTGG--GGGAAGCGGGAGAAGCTCCACATGG--GGAGATAAAGGAAAAGCTGACCATGCTCCCTCCACCTTGCAGGCAACCTGCCAAAAAGATTTTAATTACTAAGCTGACACTGTATTTTTTTCTTGTATGTGACTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289383 200 + 49145316 ttgccttt-------------------gcaggca------------ccagagg-aactgcaggtgagacatctgcggcCTTATGAGTGTGAGAGGGTGG--GGGAAGCAGGAGGAGCTCCACGTGG--GGAGATAAAGAAAAAGCTGACCACGCTCCCTCTAAGTTGCAGGCAACCTGCCAAAAGCATTTTAATTACTGAGCTGACACTGTATTTTTTTCTTGTATGTAACttttt i calJac3.chr22 C 0 I 312 s canFam3.chr1 19456856 209 - 122678785 CTGCAGGTGAGAACTGTGGGGGAGGGGAGAGGGAGAAGGGTGGAGTCCAGGGG-GACTGCAGGTGAGAA--CTGTGGCCT-----------GGGGATGGCAGGGGAGGAGCAGAAGTTCCAAGTGGGAGGAAATAAAGAAAAAGCTGACCATGCTCACTGCA-GCTGCAGGCAACCTGCCAAAAGcatttcaattactgaac--------tatttttcccttgcatgtgact---- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=85137.000000 s hg38.chr19_GL949753v2_alt 4724 32 + 796479 taagaagcagctgg-aagtctttatgacctaag s panTro4.chr19 58941549 32 + 63644993 taagaagcagctgg-aagtctttatgacctaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571822 32 - 106955855 taagaagcagctgg-aagtctttatgacctaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863036 33 + 64156825 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879771 33 + 59248254 TAAGAAGCAGCTGGAAAGTCTTTATGACCTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003274 32 + 51301725 TAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715581 32 + 50890351 AAAGAAGCAGCTGG-AAGTCTTTATGACCTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289895 32 + 49145316 TAAGAAGCAGCTGA-AAGTCTTTATGACCTAAG i calJac3.chr22 I 312 C 0 s canFam3.chr1 19457065 24 - 122678785 --------aattgg-acacctttattacctaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55802495 960 + 60714840 I a score=530979.000000 s hg38.chr19_GL949753v2_alt 4756 225 + 796479 atgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga s panTro4.chr19 58941581 225 + 63644993 atgactataaaaattatgagaaggccgggcgcagtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcaagaccagcctggccaacatggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggtagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102571854 227 - 106955855 acgactataaaaattatgagaaggccgggcgcagtggctcacacctgtaatcctagcacttttgggaggccaaggtgggcggatcacttaaggtcaggattttcaagaccatcctgtctaactgggcgaaaccctgtctctactaaaaat-acaaaaattagctgggcgtggaagcacatgcttgtaatcccagctgctcgggaggctgaggcaggagaatcacttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863069 225 + 64156825 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatgacaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54879804 225 + 59248254 ATGACTATAAAAATTATGAGAAggccaggcgcagtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctgctaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003306 225 + 51301725 ATGACTATAAAAATTATGagaaagccaggcgcggtggctcacgcctataatcccagcac-tttgggaggccaaggtgggcggatcacttaaggtcagga-gttcgagaccagcctggccaacatggcaaaaccctgtctctactaaaaat-acaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggagactgaggcaggagaatcacttga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715613 226 + 50890351 ATGACTATAAAAATTATAAGAAggccgggcgcggtggctcacgcctgtaatcctagcac-tttgggaggccaaggtgggcagatcacttaaggtcagga-gttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaataacaaaaattagctgggtgtggtagcacatgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45289927 225 + 49145316 ATGACTATAAAAATTATGAGAAGTccaggcacgatggctgatgcctgtaaccccagcgc-tttgggaggccaaggtgtgtggatcatttgaggtcagga-gttcaagaccagcctggccaacgtggtaaatctccgtctctactaaaaac-acaaaacttagctgggcgtggtggctcatgcctataattccagatgctcgggagactgaggcaggagaattacttga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C e ponAbe2.chr19 55802495 960 + 60714840 I a score=53009.000000 s hg38.chr19_GL949753v2_alt 4981 28 + 796479 acctgggaggcagaggttgcagtgaacc s panTro4.chr19 58941806 28 + 63644993 acctgggaggcagaggttgcagtgaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803455 28 + 60714840 acctgggaggcagaggttgcagtgaatc i ponAbe2.chr19 I 960 C 0 s nomLeu3.chr10 102572081 28 - 106955855 atctgggtggcagaggttgcagtgaacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863294 21 + 64156825 acctgggaagcag-------agtgagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880029 21 + 59248254 acctgggaagcag-------agtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003531 20 + 51301725 acct-gcaagcag-------agtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715839 28 + 50890351 acctgggaggcagaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290152 28 + 49145316 aaccaggaggcagaggttgcagtgagct i calJac3.chr22 C 0 C 0 e canFam3.chr1 19457089 0 - 122678785 C a score=1230016.000000 s hg38.chr19_GL949753v2_alt 5009 407 + 796479 atgactgcaccatagcactccaggctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttacatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATACTATCTACAACAACCCT s panTro4.chr19 58941834 407 + 63644993 atgattgcaccatagcactccagcctgggcaacagagcaagactgtctc---------------------------------------aaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggt-tgatagggcaatgggaa------aaaagaaaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGTAAC-AGTTGGTCATGCTATCTACAACAACCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803483 419 + 60714840 atcattgcaccacagcactccagcctgggcaacggagcaagactgtctcaa------------------------------aaaaaaaaaaaaaaaaaaaaGTTATGAGACTTGCTTTAGATGTCACCCAAGGGCACAGGTAAAGAATTAGACCTAGGAGTTGGGTATGATAGGGCAATGGGGG------AAAAGAAAAAAATTGTTTACTG-AATCAAGGGAATAATCACACCTCCATCTTTACAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggtttgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACTGAAAGTCCCACATCCTAAG------ACACACACACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTACAACAACCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102572109 416 - 106955855 atgattgcaccacagcactccagcctgggcaacagagcaagactgtccc--------------------------------ccacaaaaaaaaaaaaaaaagttatgagacttgctttagatgtcacccaagggcacaggtaaagaattagacctaggagttgggtatgatagggcaatggggg------aaaag-aaaaaattgtttactg-aATCAAGGGAATAATCACACCTACATCTTTGCAACTCACGTGCTTACAACtag---ggcaaccaaatt-----gttccggttcgcccaggattttctctggtttagccctgaaatttctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG------ACACATAAACACACGCCCCTGCACACACCAATCCTGGTAAAACGGGAAC-AGTTGGTCATACTATCTacaacaaccct i nomLeu3.chr10 C 0 I 822 s rheMac3.chr19 59863315 447 + 64156825 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcgaaaaaaaacaaaaaacaaaaa-aaaaaaaaaaaaaGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcaTTTCTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880050 448 + 59248254 atgactgcaccactgcattgcagcctgggcgacagagcaagactgtctcaaaaaaaaaacaaaaacaaaaacagaaaaaaaaaAAGGAAAAGAAAAAAGAAAATTTGAGACTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggtttgcccaggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACCGAAAGTCCCACATCCTAAG--------ACACACACACACGCCCCTGCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003551 433 + 51301725 atgactgcaccactgcactgcagcctgggcgacagagcaagactgtctcaa---------------------aaaaaaccaaaaaaaaaaagaaaaaaaaatttatgagacTTGCTTTAGATGTCGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGGTGTGATAGGGcaatggggg------aaaagaaaaacattgtttaCTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTC--GTGCTTACAACTAG---GGCAACCAAATT-----GTTCTGGTTTGCCCAGGATTTTCTCTGGTTTAGCCCTGAAATGTCTGTGTCCTGGGAAATtcctcatttctattttaaaaccgAAAGTCCCACAtcctaagacacacacacacacacacacgccccagCACACACCAATCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCCACAACAACCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46715867 454 + 50890351 atgactgcaccactgcactgcagcctggacaacagagcaagactgtctcaaaaaaaaaaaaaaaagaaagaaagaaaagaaaagaaaagaaaaaaagaaaaTTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGATCTAGGAGTTGGATGTGATAGGGCAATGGGGG------AAAAGAAAAACATTGTTTACTGAAATCAAGGGAATAATCACACCTGCATCTTTACAACTCATGTGCTTACAACtag---ggcaaccaaatt-----gttctggttcgcccgggattttctctggtttagccctgaaatgtctgtgtcctgggaaattcctcatttcTATTTTAAAACTGAAAGTCCCACATCCTAAG--acacatacacacacacacgcccctgcacacaccacTCCTGGTAAAGCAGAGAC-AGTTGGTCATACTATCTACAACAACCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290180 406 + 49145316 gtgattgcgccacagcactctagcctgggcaacagagcaagactatctt----------------------------------------aaaaaaaaaaaaaTTATGAGACTTGCTTTAGATGTTGCCCAAGGGCACAGGTAAAGAATTAGACCTGGGAGGTGGGTATGATAGGGTAATGGGGG------AAAAGAAAAAAACTGTTTACTG-AATCTATGGAATAATCACACCT-CATCTTTATAACTCATGTGCTTACAACCag---ggcaaccaaact-----gttccggtttgcccaggattttctctggtttagtcctgaaatttctgtgtcctgggaaatccctcaTTTCTATTTTAAAACTCAAAGTCCCACATCCTAAG--------ACAAACACACACGCCCCTGCACACACCAGTCCTGGTAAAACGGAAAC-AGTTGGTCATACTATCTACAGCAACCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457089 297 - 122678785 -----------------------------------------------------------------------------------------atgactatgaagggcatgaggcttgcgttagatgttccccaggggcacaggtaaagaaTGAGACCTGTGAGGCAAGTGTGGGAGGGTAAGGGGGGGGGTGCGGGAGGAAAA-------------AGCCATCGTACTTATCACCCCC----CCTTACAGCTCCTACGCTTACAATGAAGATGACAAACAAACTCACTCATTCCTGTTTGCCCAAGGCTTTCTCAATTTTAGC-----------------------------------------------------TCCCACATGGAGGG--------GCA---GCCCCCGCCTCAG----TCCCAGTCCTGGGAAAATGGGGATGGGGGGGTCCTACTGCTGGCAACAACCCC i canFam3.chr1 C 0 C 0 a score=358160.000000 s hg38.chr19_GL949753v2_alt 5416 125 + 796479 ATTCGAGATCTGTGTCT-T--CACGATGAGGAAAGGCACAT-GCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGATGACTCTCCTCTTTC s panTro4.chr19 58942241 125 + 63644993 ATTCGAGATCTGTGTCT-T--CATGATGAGGAAAGGCACAT-GCAGTTCTGGAGATTTTAACACGTGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAGCA----CTGAAAGCAGGTGACTCTCCTCTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55803902 123 + 60714840 ATTCGAGATCTGTGTCT-C--CACGATGAGGAAAGG--TAT-GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACCACCTGCCCTTGTATCCAACA----CTGAAAGCAGAGGACTCTCCTCTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573347 123 - 106955855 ATTCGAGATCTGTGTCT-C--CACGATGAGGAAAGG--CAT-GGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCACACAACCTGCCCTTGTATCCAACA----CTGAAAGCAGATGACTCTCCTCTTTC i nomLeu3.chr10 I 822 C 0 s rheMac3.chr19 59863762 124 + 64156825 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTGTATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880498 124 + 59248254 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATACCACCTGCCCTTATATCCAAAA----CGGAAAGCAGACGACTCTCCTCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47003984 125 + 51301725 ATTCGAGATCTGTGTCTCC--CACCATGAGGAAAGG--CATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATATCACCTGCCCTTATATCTGACA----TGGAAAGCAGACGACTCTCCTCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716321 124 + 50890351 ATTCGAGATCTGTGTCT-C--CACCATGAGGAAAGG--TATGGGAGTTCTGGAGATTTTAACACATGTTCCCAAGG-TCATGCAACCTGCCCTTATATGCAACA----CGGAAAGCAGACGACTCTCCTCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45290586 121 + 49145316 ATTCGAGATC--TTTCT-C--CACCATGAGGAAGGG--CAT-GCAGTTCTGCAGATTTTAACACATGTTCCCAAGG-TCACGCAACCTGGCTCTGTATCCAACG----CTGAAAGCAGACAACGCTCCtttttt i calJac3.chr22 C 0 I 294 s canFam3.chr1 19457386 120 - 122678785 ATCAGATATCTGTCTCT-CTTTATGGTGATGA------CAC-GGAGTCCTGGCAATTTTAAGAAATCTTCCTTAGGTTCACGTAACCTGGACGTATTTCCAGTGCCATCTGAAAACAAAGGACACCCC------ i canFam3.chr1 C 0 C 0 a score=198311.000000 s hg38.chr19_GL949753v2_alt 5541 65 + 796479 CACGATTCTAAGCCTCTTCCCGTAGCATGTCCCATGTGGAGGAGAAAAGTTAAGAAAATGAAACT s panTro4.chr19 58942366 65 + 63644993 CACGATTCTAAGCCTCTTCCCGTAGCATGCCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804025 65 + 60714840 CACGATTCTAAGCCTCTTTCCCCAGCATGTCCCATGTGGAAGAGAAAAGTTAAGAAAATGAAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573470 60 - 106955855 CGCGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTG-----GAAATGTTAAGAAAATGCAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863886 65 + 64156825 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880622 65 + 59248254 CACGATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATGAAAGTTAAGAAAATGAAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004109 65 + 51301725 CACAATTctaagcctcttcccccagcaTGTCCCATGTGGAAGATgaaagttaagaaaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716445 65 + 50890351 CACAATTCTAAGCCTCTTCCCCCAGCATGTCCCATGTGGAAGATAAAAGTTAAGAAAATGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45291001 65 + 49145316 CACAGTTCTAGGTTTCTTCCCCCAGCATTTCCTGTGTGGAAAAGAAaagttaagaaaatgaaact i calJac3.chr22 I 294 I 1315 s canFam3.chr1 19457506 50 - 122678785 ---------------CTTTCCACAGCTTGCCCCACATGGAAGACATAAGTTAGGAAAACAGCCAT i canFam3.chr1 C 0 C 0 a score=111311.000000 s hg38.chr19_GL949753v2_alt 5606 40 + 796479 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA s panTro4.chr19 58942431 40 + 63644993 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804090 40 + 60714840 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573530 40 - 106955855 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59863951 40 + 64156825 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880687 40 + 59248254 GGCCAAAACTTGCTACTGCATTTGTGATTTTAGAAAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004174 40 + 51301725 ggCCAAAACTTGCTACTGCGTTTGTGATTTTAGAAAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716510 40 + 50890351 GGCCAAAACTTGATGCTGCATTTGTGATTTTAGAAAGTAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19457556 39 - 122678785 GGGAGACCCTCACTACTGCATTTG-GAAATTAGAAAATAA i canFam3.chr1 C 0 I 38 e calJac3.chr22 45291066 1315 + 49145316 I a score=1242277.000000 s hg38.chr19_GL949753v2_alt 5646 556 + 796479 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACAAGATCAAGTTAAACTCGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCATCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacggtggctcacacctgtaatcccagtgctttgggaagctgaggc s panTro4.chr19 58942471 554 + 63644993 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACGGAACGGATTGTTTACCTTAACAAGATCAAGTTAAACTTGTATAGGGCTTATATATAACGCCGCTTAAAAGCTCAAGTTTATGCGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATAGATCTGGCCG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCAACAGTTCTTAGCAGGAGAGACAGTG----------AGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTCGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGC--CAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATATAGTGTCAATTAGAGGTACATCCCTGAGGTCTTT----------------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagcgctttgggaagctgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804130 558 + 60714840 ATGATCAGACATTATTAAAATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTT---AAGATCAAGTTAAACTTGTATAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGGCGG-TGGAACTGGTAGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTG----------GGGAAAGCTGCAGGTTACTTGGAGACAGTCTTCCCAAATGCATTAGAGGAGCTGTAAAAATCTGCCACAGAAGGAACAATGATCCATAGTCAG-AAAAGTTACTGCAGCTTAAGCTGGAAACCCTTCTTGTTCAGGACTGTTGTAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAGTTAGATGTACATCCCTGAAGTCTTTAAAAC-----------AAAACAAA-ACAAACTCagccaggtgcggtggctcacacctgtaatcccagagctttgggaggctgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102573570 572 - 106955855 ATGATCAGACATTATTAAAATTATCAGTGCAAAAAGAAAGTGAGACTGAACGGATTGTTTATCTTAACAAGATCAAGTTAAACTTGTACAGGGCTTATATATAATGCCGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAGCTCAGGCAGTCCCTCTGGTGGTCGTTATGGATCTGACGG-TGGAACTGGTGGATATGAAAACAGAAGGTTCTAAAAACAGCAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTCAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAGGTGTAAAAATCTGCCACAGAAGGAACAATGATCCGTAGTCAGAAAAAGTTACTGCAGCTTAAGGAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTATTGATTAATGTGATGTAGTGTCAATTAGACGTACATCCCTGAGGTCTTTAAAAC-----------AAAACAAA-ACAAACTCAgccaggcacagtggctcacacctgtaatcccagtgctttgggaggcctaggc i nomLeu3.chr10 C 0 I 136 s rheMac3.chr19 59863991 551 + 64156825 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAAAAAACAAAAACAACAACAACAAAAAAAAACTCATccaggcacggtggctcacgcctgtaatcccggcgctttgggaggccgaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54880727 551 + 59248254 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAG-TGGAAGTAATGGATAC--------------------------------GGCTACAGTTCTTAGCAGGAGAGGCAGTGAGGAGTTGTGAGGAAAGTTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATTAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCGTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATCAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAGGTCTTAaaaaacaaaaacaacaacaacaacaaaaaACTCATccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004214 582 + 51301725 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACAGATTGTTTACCTTAACGTGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAAGTTTATGGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTAGGGATGTGGCAG-TGGAAGTGATGGATACAGTAACAGAAGGTTCTAAACACAACAGAAAAGGGCTACAGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTCGTCCCAAATGCATGAGAGGAACTGTAAAAATCTGCCACAGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTGCAGGACTGTCATAGCCACAGTTTGCAAAAAGTGCAGCTGTTGATTAATGTGATGTAGTGTCAATTAGATGTACATCCCTGAggtcttaaacaacaacaacaacaacaacaac-aaaaactcatccaggcacggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46716550 583 + 50890351 ATGATCAGACAGTATTAACATTATCAATGCAAAAAGAAAGTGAGACTGAACGGATTGTTTACCTTAACATGATCAAGTTAAACTTGTATAGGGCTTAAATATAATGCTGCTTAAAAGCTCAGGTTTATCGGGGGCAGTTTTGGTGGAAGAAACTCAGGCAGTCCCTCTGGTGGTCGTTACGGATGTGGCAGTTGGAAGTGATGGATATGGTAACAGAAGGTTCTAAAAACAACAGAAAAGGGCTACGGTTCTTAGCAGGAGAGACAGTGAGGAGTTGTGAGGAAAGCTGCAGGTTACTTGGAGACAGTAGTTCCAAATGCGTTAGAGGAACTGTAAAAATCTGCCACGGAAGGAACGATGATCCATAGTCAG-AAAAGTTACTGCCGCTGAAGCAGGAAACCCTTCTTGTTCAGGACTGTCATAGCCACAGTTTGCAAAAACTGCAGCTGTTGATTAATGTGATGTAATGTCAGTTAGATGTACATCCCTGAGGTCTTaaaaacaaaaaacaaaaaacaaaaa-aaaaCCTCATccaggcatggtggctcacgcctgtaatcccagcgctttgggaggccgaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=195419.000000 s hg38.chr19_GL949753v2_alt 6202 83 + 796479 aggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctacgaaaaatacaaaaatta s panTro4.chr19 58943025 83 + 63644993 gggcagatcacctgaggctgggagattgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaattg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804688 83 + 60714840 gagcagatcacctgaggctggaagttggagaccagcctggctaacatggtgaaatcctgatgctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 I 132 s nomLeu3.chr10 102574278 83 - 106955855 gggcagatcacctgaggctgggagtttgagaccagcctggctaacatggtgaaaccccgtctctactaaaaatataaaaatta i nomLeu3.chr10 I 136 C 0 s rheMac3.chr19 59864542 83 + 64156825 gggcagatcacctgaggctgggagttggagaccagcctctctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881278 83 + 59248254 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004796 83 + 51301725 gggcagatcacctgaggctgggagttggagaccagcctcgctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717133 83 + 50890351 gggcagatcacctgaggccaggagttggagaccaacctggctaacatggtgaaaccctgtctctactaaaaatacaaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=301035.000000 s hg38.chr19_GL949753v2_alt 6285 171 + 796479 gcccggcatggtggtgggcgcctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaataaataaat s panTro4.chr19 58943108 171 + 63644993 gccgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctaaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccaagattgtgccactgcactccagcctggatgctaagagtgaaatgccgtctcaaaaaataaattaaataaataaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102574361 171 - 106955855 gctgggcgtggtggcaggcacctgtaatccc----agctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagtcaagatcgtgccactgcactccagcctgggtgacaagagtgaaactccgtctcaaaaaataaattaaatagataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864625 175 + 64156825 gtcgggcgtggtggtgggcacctgaaatcccagccagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagacgagattgtgccactgcactctggcatggatgacaagagtgaaactccgtctcaaaaaataaattaaataaataaaG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881361 175 + 59248254 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggagactgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactctggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47004879 175 + 51301725 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccggcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaataaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717216 171 + 50890351 gtcgggcgtggtggcgggcacctgaaatcccagctagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagatcgtgccactgcactccagcatggatgacaagagtgaaactccatctcaaaaaataaattaaataaaT---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e ponAbe2.chr19 55804771 132 + 60714840 I e calJac3.chr22 45291066 1315 + 49145316 I a score=731941.000000 s hg38.chr19_GL949753v2_alt 6456 356 + 796479 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca--aaaacaaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG---TTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA s panTro4.chr19 58943279 353 + 63644993 aattagctggacgtggtggcaggcacctgtaatcccagc-tacttgggaggctgaggcaggagaatcacttgagcctgggaggtggaggtt----------------------------------------------gcagtgaccagagatcgtgccactgaacgccagcctgggcaacagagcaagattctgtctca-------aaaaacaaaaacaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCATGTGATTGATTGAACGATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTTCATAACAGAAAAAAAAATTAAATGTATAGCACTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55804903 353 + 60714840 aattagtcaggcctggtggcgggcacctgtaatcccagc-tactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggtt----------------------------------------------tcggtgagccgagatcatgccactgaactccagcctgggcaac--agcaagactctgtctcaaaaaaacaaaaacaaaagc-aaaaaaGGCTTAAGTTTATGAATGAACTGTTCATATTAGGTAATGGTCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTACTCATG----TGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGCAAAAAAAATTAAATATATAGCACTAGA i ponAbe2.chr19 I 132 C 0 s nomLeu3.chr10 102574532 346 - 106955855 aattagctggacgtggtggcaggcacctgtagtcccagc-tactcaggaggctgaggcaggagaatcacttgagcctgggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccaccgaacaccagcctgggcaacagagcaagattctgtctca-------aaaaaaaaaaac--aaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTGATGGTCTTTGAAAATAATGACTG-TTTTTTGTATCAACTATTGTGCTCATGTGATTGATTGAACAATGCTTCCAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAAAAG-----AAATGTATAGCACTAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59864800 358 + 64156825 ATttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagc----------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------cagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881536 358 + 59248254 aTttagccggccatggtggcaggcacctgtaatcccagc-tacccgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gaagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaCGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCGTTTTTTTGTACCAACTATTGTGCTCACGTGATTGGTTGAACGGTGCTTCCAAAGAATTTGAAACAATAAGTCAAAGAAACCTAATGTCCATAACAGAAAAAAACAATAGATGTATAGCACTAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005054 358 + 51301725 atttagccggccgtggtggcaggcacctgtaatcccagcttacttgggaagctgaagcaggagaatcacttgagcccaggaggtggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaggctCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACCG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACGGTGCTTCCAAAGAATTTGAAACAGTAAGTCAAAGAAACCTAATGTccataacagaaaaaaacaatagatgtatagcactaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717387 357 + 50890351 ATttagccaggcgtggtggcaggcacctgtaatcccagc-tacttgggaagctgaagcaggagaatcacttgagcccaggaggcggaggtt----------------------------------------------gcagtgacctgagatcgtgccactgaactccagcctgggcaacagagcaagactctgtctcaaaaaaacaaaaacaaaagcaaaaaaaGGCTCAAGTTTATGAATGAACTGTTCATATCAGGTAC---TCTTTCAAAATAATGACTG-TTTTTTGTACCAACTATTGTGCTCACGTGATTGGATGAACAATGCTTCGAAAGAATTTGAAACAATAAGGCAAAGAAACCTAATGTCCATAACAGAAGAAAACAATAGATGTATAGCATTAGA i chlSab2.chr6 C 0 I 27 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=-7609.000000 s hg38.chr19_GL949753v2_alt 6812 9 + 796479 AAAATTGA--------t-- s panTro4.chr19 58943632 10 + 63644993 AAAATTGA-------tt-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805256 17 + 60714840 AAAATTGAttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102574878 12 - 106955855 AAAATTCA-----tttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865158 8 + 64156825 --AA---------tttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881894 17 + 59248254 --AAttttttttttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005412 7 + 51301725 --a----------tttttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46717744 27 + 50890351 I a score=730544.000000 s hg38.chr19_GL949753v2_alt 6821 308 + 796479 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacttgcctcagcctcccaaagtgctgggattacaggcatgaacc----acagagcctggcATGATACTAGAAAAA s panTro4.chr19 58943642 308 + 63644993 ttttttttttttgagacagggtctcgctctgtcacccaggctggagtgc----agtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccatgctcagctaatttttgtatttttagtatagacagggttttaccattttccccaggctggtctcgaactcctatgctcaagcaatcaacctgtctcagcctcccaaagtgctgggtttacaggcatgaacc----acagagcctggcATGATACTAGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805273 306 + 60714840 ttttttttttttgagacagggtctca--ctgtcacccaggctggagtgc----agtggtgcaatgctggctgactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccggactacaagcatgcaccaccacacccagctaatttttgtatttttagtagaaacagggttttgccattttccccaggctggtctcaaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctgggattacaggcatgaacc----actgagcctggcATGGTACTAGaaaaa i ponAbe2.chr19 C 0 I 304 s nomLeu3.chr10 102574890 312 - 106955855 ttttttttttttgagacagggtctcactctgtcacccaggctggagtgc----agtggtgcaatgatgactcactgcagcctccacctcctgggctccagcgatcttcctgcctcagcctctagagtagcctggactacaagcatgcaccaccatatccagctaatttttgtattttcagtagagacagggttttgccattttccccaggctgttctcgaactcctatgctcaagcaatccacctgcctcagcctcccaaagtgctggggttacaggcatgaaccaGTGAGTGAGCCTGGCATGGTACTAGAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865166 310 + 64156825 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccaccccctgggctccagcgatcctcctgcctcagcctctagagtagcacagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcactctacctgcctcagtcccccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54881911 310 + 59248254 tttttttttttggagacagggtcttactctgtcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcatgaacc----actgcgcctggTGTGGTACTAGAAA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005419 312 + 51301725 ttttttttttttgagacagggtcttactctatcacccaggctggagtgcagtgagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacaaggttttgccattttccccaggctggtctcgaactcctaggctcaagcaatctacctgcctcagtctcccaaagtgctgggattacaggcgtgaacc----actgcgcctggtgtGGTACtagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46717771 312 + 50890351 ttgttgttgttggagacagggtcttactctgtcacccaggctggagtgcagcaagtggtgcaatgatggctcactgcagcctccacctcctgggctccagcgatcctcctgcctcagcctctagagtagcccagactacaagcgtgcaccaccacgcccagctaatttttgtatttttagtagagacagggttttgccatttcccccacgctggtctcgaactcctaggctcaagcaatctacctgcctcagtctctcaaagtgctgggattacaggcgtgaacc----actgcgcctggTATGGTACTAGAAAAA i chlSab2.chr6 I 27 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=388837.000000 s hg38.chr19_GL949753v2_alt 7129 192 + 796479 T------TCtttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacgggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct s panTro4.chr19 58943950 191 + 63644993 T------TC-ttttttttttttgacatttaagttcaggggtacatgggcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagatta---------ttttttttctagtgtatttactacttcctgattatcagattattttatcacccagttattaagcctagtacccactagttatttttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55805883 198 + 60714840 t------tttttttttttttttaacttttaagttcaggggtacatggtcaggacgtgcaggtctgttacatgggtaaacgtgtgtcatgggggtttgttgtacAGATTATTTC---CTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttattttttgt i ponAbe2.chr19 I 304 C 0 s nomLeu3.chr10 102575202 151 - 106955855 ----------------TTCTTT--------------------------------------gtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc-ttcTTTTTGTTTCTAGTGTATTTACTACTTCCtgatatacagatt-ttttatcacccaggtattaagcccagtacccactagttatttttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865476 196 + 64156825 --------Ttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgttgtacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882221 197 + 59248254 -------Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaatgtgtgtcatgggggtttgttgtacagattatttc---TTTTTTTTTTCTAGTGTAGTTACTACTTCCtgatatacagattattttatcgcccaggtattaagcctagtacccactagttatttttcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47005731 207 + 51301725 tcctttttttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcagatttgttacacaggtaaacgtgtgtcatgggggtttgttgtatagattatttctttttttttttttctagtgtagTTACTACTTCCtgatatacagattattttatcacccaggtattaagcctagtacccactagttatttttttt i papAnu2.chr19 C 0 I 683 s chlSab2.chr6 46718083 200 + 50890351 TTCTT--Tttttttttttttttaacttttaagttcaggggtacatgtgcaggatgtgcaggtttgttacacaggtaaac--gtgtcatgggggtttgttgtacagattatttc---ttttttttttctagtgtagttactacttcctgatacacagattattttatcgcccaggtattaagcctagtactcactggttatttttcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I a score=4011.000000 s hg38.chr19_GL949753v2_alt 7321 2 + 796479 ga s panTro4.chr19 58944141 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806081 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575353 2 - 106955855 ga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865672 2 + 64156825 ga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54882418 2 + 59248254 ga i macFas5.chr19 C 0 M 20327 s chlSab2.chr6 46718283 2 + 50890351 ga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I a score=176162.000000 s hg38.chr19_GL949753v2_alt 7323 154 + 796479 tcctctctctgctaccaccctccaccctctgacaggccccagcatgtgtGAAAAATTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt s panTro4.chr19 58944143 158 + 63644993 tcctctctctcctaccaccctccaccctctgacaggccccagcgtgtgtGAAAAACTCTTATAGTCTTCTAGAAAATACAATAGGTAGCCTTTGGAACATAGGGTATCATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAAttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806083 141 + 60714840 tcctgtctctccta-------ccaccctctgacaggccccagtgtgtgtGAAAAATTCTTGTAGTCTTCTAGAAAATACCATAGGCAGCCTTTGGAACACAGGGTATTATAAAGAGAAGCTGTAGAAAATATATTTCTTTGAA----------TTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575355 144 - 106955855 tcctgtctctcctactaccctccaccctctgacgggccccagtgtgtgtGAAAAATTCTTACAGTCTTCTAGAAAATACAATAGTTAGCCTTTGGAACGTAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA--------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59865674 154 + 64156825 ccctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTTTTACAGTCTTCTAGAAAGTAAAATAGGTAGCCTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----TTTTTTTTTTT i rheMac3.chr19 C 0 I 333 s chlSab2.chr6 46718285 154 + 50890351 tcctctctctcctaccaccctccaccctctgacaggccccagtgtgtgtGAAAAATTCTTATAGTCTTCTAGAAAGTAAACTAGGTAACTTTTGGAACATAGGGTATTATATAGAGAAGCTGTAGAAAATATATTTCTTTGAA----ttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=2730.000000 s hg38.chr19_GL949753v2_alt 7477 3 + 796479 ttt s panTro4.chr19 58944301 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806224 3 + 60714840 TTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575499 3 - 106955855 TTT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46718439 3 + 50890351 ttt i chlSab2.chr6 C 0 I 443 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=7656.000000 s hg38.chr19_GL949753v2_alt 7480 15 + 796479 tttttttACAAATGA s panTro4.chr19 58944304 15 + 63644993 tttttttACAAATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806227 15 + 60714840 TTTTTTTACAAATGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575502 15 - 106955855 TTTTATTACAAATGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e chlSab2.chr6 46718442 443 + 50890351 I e papAnu2.chr19 47005938 683 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59865828 333 + 64156825 I a score=236370.000000 s hg38.chr19_GL949753v2_alt 7495 143 + 796479 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttatgggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc s panTro4.chr19 58944319 143 + 63644993 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaatgccccccactggggggcttataggacagaaatggattttct-caccgttctgcaggctggaaatccaagatggaggtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806242 143 + 60714840 TCACTATAATGTTTAAAATATGTTTACCACCTACAG-TTgtgtgctagggaagccataacaaaataccccccactgggggacttatgatatagaaatggattttct-caccgttctgcaggctggaaatccaagacggaggtgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102575517 145 - 106955855 TCACTATAATGTTTTAAATATGTTTACCACCTACAGtttgtgtgctagggaagccataacaaattaccccccactggggtgcttatggtaccgaaatggattttctccatagttctgcaggctggaaattcaagatggaagtgcc i nomLeu3.chr10 C 0 I 2352 s rheMac3.chr19 59866161 143 + 64156825 TCACTATTACGTTTAAAATATGTTTACCACCtgcag-tagtgtgctagggaagccataacaaaataccccccacggggaggcttatggtacaaaaatggattttct-cacagttctgcaggctggaaatccaagatggaggtgcc i rheMac3.chr19 I 333 C 0 s papAnu2.chr19 47006621 143 + 51301725 tcactattatgtttaaaatatgtttaccaCCTGCAG-TAGTGTGCTAGGgaagccataacaaaataccccCCACgggggggCTTATGGTACAAAAAtggattttct-cacagttctgcaggctggaaatccaagatgGAGGTGCC i papAnu2.chr19 I 683 C 0 s chlSab2.chr6 46718885 134 + 50890351 TCACTATTGTGTTTAAAATATGTTTACCATCtgcag-tagtgtgctagggaagcc--------ataccccctactggggggcttatggtacaaaaatggattttct--acagttctgcaggctggaaatccaaaatagaggtgcc i chlSab2.chr6 I 443 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1390201.000000 s hg38.chr19_GL949753v2_alt 7638 1126 + 796479 agtagggtcagtttctcccggggtctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttcttttttttttttttgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccacacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaacggcctcttgtctctaaatacagtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCATCAGACTGATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCttttcta-------------tttttttttctgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtctcgatctcttgaccccatgatcctcccactttgacctcccaaagtgttgggattacaggtgtgagctaccgcgcctggccACATATTAAATCttttttttttttttttttttt s panTro4.chr19 58944462 1138 + 63644993 agtagggtcagtttctcctggggtctctgtgctttgtatgcagatggccgccttcttgctgtgtctccatgtggtctttcctctggatgtACATATCCTGGTGTCCt-----tttc-tttttttttttctgagttggagtcttactctgttgccca-gctggagtgcaatgacacgatctcagctcactgcagcctctgcctcctggattcaagcgattcccctgcctcagcctatcgagtagctgggattacaggcgtgcaccaccgcgcccagctaatttttgtatttttagtagacatggggtttggccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgggcttcccaaagtgctgaaattacaggcgtgagcca-ccgcacGTAGCccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacggtcacattctgagttactgggagttaggattcagcacacgaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTGATGATCTGTGCTTTTTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTTATTTACAAAGCCACCTCCACATGTGTTGAGCCTTTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCGGTGCTTTCCACAGATTCATATGTTAGATCTtttctattttttttttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaaacaattctcctgcctcagcctcctgagtagcagggactacaggcgtgtgccactattcccagctaatttttgtatttttggtagaggcagggtttcaccatattggccaggatggtctcgatctcctgaccccatgatcctcccactttgacctctcaaagtgttgggattacaggtgtgagctactgcgcccggccACATATTAAATCttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55806385 1124 + 60714840 agtagggtcagtttctcctggggtctctctgctttgtatgcagatgggcgccttcttgctgtgtctccacatggtctttcctctggatgtacatatcctagtgtctt-----tttt-tttttttttttttgatatggagtcttactctgttaccca-gctggagtgcaatggcacgatctcagctcactgcagcctctgcctcctggattcaagcgattctcctgcctcagcctatcgagtagctgggattacaggcatgcaccactgcgcccggctaa-ttttgtatttttagtagagatggagtttgtccatgttggccaggctggtcttgaactcctgacctcaggcgatccgcccacctgagcttcccaaagtgctgagattataggtgtaagcca-ctgcacGTAGCccctagtgtcttttttatgtccaaatttccttttctcataagggcctcttgtctccaaatacagtcatactctgagttactgagagttaggattcagcacacaaattttgaggagatgtaattcagcccataaTTAAGCCCTATCCTCGTCAGACTCATGATCTGTGCTTTCTCTGAACTAAC-AGGATTTATATATTCCTTTTTAACAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGT------TGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCATTTACAAAGCCACCTCCACATGTGTTGAGCTTCTTCAGTTTAC-TTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTTCCACAGATTCACATGTTAGGTCttttctt-----tctttttttttttttttttgagacagagtttccctctgtcgcccaggctggagtgcaatggtgtgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagcagggactacaggtgtgtgccaccatgcccggctaatttttgtatttttagtagaggcagggtttcaccatattggccaggatggtcttgatctcttgacctcatgatcctcccacttcgacctcccaaagtgttgggattacaggtgtgagctactgcgcctggccACATATTAAATC--ttttttttttttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59866304 1124 + 64156825 agtagggtcagtttctcctgaggcctctctgctttgtatgcagatggccgccttcttgctgtgtctccacatggtctttcctctggatgtacacaacctagtgtgtc--ttttttt-tttttttttttttgagatggaatcttgctctgttgcccaggctagagtacaatggcatgatctcacctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggctcaccccagcacgccctgttcatttttgtatttttagtagagatggggcttgggcatgttggccaggctggtctcgaattcctgacctcaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggtgttaggattcagcacacgaatttt---gagatgtaattcagcccataaTTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTCGATAGCAAAGAACTCAGGTTCTCCATGG-CCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTGAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTTAGATCttttcta----------------ttttttttgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctggctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcccgaagtgttgggattacaggtgtgagccaccgcgcccggccACATGTTAAATCtttttcttttttctttttttt i rheMac3.chr19 C 0 I 2658 s papAnu2.chr19 47006764 1127 + 51301725 AGTAGGGTCAGTTTCTCCTGAGCCCTCTCTGCTTTGTATGCAgctggccaccttcttgctgtgtctccacGTGGTCTTTCCTCTGGATGTACACATCctagtgtctcttttttttt-tttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctctgcctcctgagttcaagcgattctcctgcctcagcctcttaagtagccaggattacaggtgcacaccaccacgcccagttaatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgaccttaggagatccgcccacctgggcttctcaaagtgctgagatcacaggcgtgagcca-ccgcacgtagCCCCTAGTGTCTTTTTtatgtccaaatttccttttttcacaaGGGCCtcttgtctccaaatacagtcacattctgagttaCTGGGCGTTAGGATTTAGCACACGAATTTT---GAGATGTAATTCAGCCCATAATTAAGCTCTATCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGatttatatattcctttttgATGGCAAAGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTGTGCTTCCCACAGATTCACATGTtagatcttttcta----------------ttttttttgagatggagttttgctctgtcgctcaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctgcctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcctgcttcaacctcccaaagtgttgggattacaggtgtgagccaccgcacgcagccacatgttaaatctttttttttttttttttcttt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46719019 1122 + 50890351 agtagggtcagtttctcctgagccctctctgctttgtatgcagatggccgccttcttgctgtgtctccacgtggtctttcctctggatgtacacatcctagtgtctc------tct-cttttttttttttgagatggaatcttgctccgttgcccaggctggagtgcaatggcatgatctcagctcactgcagcctccgcctcctgagttcaagcgattctcctgcctcagcctctcgagtagccaggattacaggcgcacaccaccacgcccggttgatttttgtatttttagtagagatggggcttggccatgttggccaggctggtctcgaattcctgacctcaggtgatccgcccacctgggcttctcaaagtgctgagattacaggcgtgagccacccgcacatagcccctagtgtcttttttatgtccaaatttccttttttcacaagggcctcttgtctccaaatacagtcacattctgagttactgggcgttaggattcagcacatgaatttt---gagatgtaattcagcccataaTTAAGCTCTGTCCTCGTCAGACTGATGATCTGTACTTTCTCTGAACTAACGGGGATTTATATATTCCTTTTTGATAGCAAGGAACTCAGGTTCTCCATGGCCCCTTTATGAAGTTGCTCCTGCTGGTACATGACCCTCAGTTAGTTTCCTGAAGTCACTTACAAAGCCACCTCCACATGTGTTGAGCCTCTTCAGTTTACTTTCAAATCCTGGGCCTGTGCTGCATGGCTCTGCTTCCCACAGATTCACATGTTAGAtcttttcta----------------ttttttctgagatggagttttgctctgtcgcccaggctggagtgcaatggcatgatcttggctcgctgcaacctccgcctcctgggttcaagcgattctcctacctcagtctcctgagtagctggaattacagatgagcgctaccacgcccagctaatttttgtatatttagtagagacagcttttcaccatattggccaggatggtctcgatctcttgacctcatgatcctcccgcttcaacctcctgaagtgttgggattacaggtgtgagccaccgcacccggccACATGTTAAATCttttttttttttttttttttt i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=177693.000000 s hg38.chr19_GL949753v2_alt 8764 219 + 796479 gagacagagtcttgctctgtcacccaggctggagtgcaatgatggatctcggctcactgcaagctccgcctcccaggttcatgccattttcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcgatctcctgacctcatgatccacccacc s panTro4.chr19 58945600 219 + 63644993 gagacagagtcttgctctgtcacccaggctggggtgcaatgagggatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccatcacgcctggctaattttttgtatttatagtagagata-----------tgttagcca-ggatggtctcaatctcctgacctcatgatccacccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55807509 220 + 60714840 gagacggagtcttgctgtgtcacccgggctagagtgcaatgagggatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgagactacaggcacccgccaccacacccggctaattttttgtatttgtagtagagaca-----------tgttagccagggatggtgtcaatctcctgacctcgtgatccacccgcc i ponAbe2.chr19 C 0 I 5201 s papAnu2.chr19 47007897 230 + 51301725 gagacagagtctccctctgtcaccctaactggagtgcaatgagggatctgggctcactgcaagctccgcctcccaggttcacgccattctcctggctcagcctcctgagtagctgggactacaggcgcccgccaccacgtccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggatggtctcgatcccttgacctcatgatccacctgcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46720145 230 + 50890351 gagacggagtctcgctctgtcaccctaactggagtgcaatgaggaatctgggctcactgcaagctccacctcccaggttcacgccattctcccggctcagcctcctaagtagctgggactacaggcgcctgccaccacgtctggctaattttttgtatttgtagtagagacagggtttcaccgtgttagcca-ggacggtcttgatcccctgacctcgtgatccacctgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=12021.000000 s hg38.chr19_GL949753v2_alt 8983 16 + 796479 tcggcctcccaaagtg s panTro4.chr19 58945819 16 + 63644993 tcggcctcccaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812930 16 + 60714840 tcggcctcccaaagtg i ponAbe2.chr19 I 5201 C 0 s papAnu2.chr19 47008127 15 + 51301725 ttggtct-ccaaagTG i papAnu2.chr19 C 0 I 1767 s chlSab2.chr6 46720375 16 + 50890351 ttggcctcccaaagtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=135279.000000 s hg38.chr19_GL949753v2_alt 8999 265 + 796479 ctgggattacaggcgtgagccaccgcgcccggccTCATGTTAAATCTTGACACCCAATGTGATCTGAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgacgccacctgccccagggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatccgagcctccct s panTro4.chr19 58945835 265 + 63644993 ctgggattacaggcatgagccaccatgcccggccACATGTTAAATCTTGACACCCAATATGATCATAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccgtgacgccacctgccccagggagtcccagcccgggctatacacgctatggagccgcagggagtcctgccccttccgagttggggtgggagctcccagggtgatgctacagctgtccaaaccccagctgtggatctgagcctccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55812946 265 + 60714840 ctgggattacaggcatgagccaccacgcctggccACATGTTAAATCTTGACACCCAATGTGATCGTAGAGGTTGGGCCTTTGGtgatggcagcagccactccagacggcttgctgctgccatgatgccacctgccacacggaggcccagcccgggctatacacgctatggagccgcagggagccctgccccttccgagttggggcgggagctcctagggtgatgctacagttgtccaaaccccagctgtggatccgagcctccct i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46720391 265 + 50890351 ctgggatgacaggaatgagccaccgcgcccggccacatgttaaatcttaacatccaatgtgatcgtagaggttgggcctttggtgatggcagcagccactccagatggcttgccgctgccatgacgccaactgccacagggaggcccagctgggactatacactcaatggagccgcagggagtcctgccccttctgagttggggcgggaggtcccagggtgctgcttcagctgtgcaaaccccagctgtggatccgagcctccct i chlSab2.chr6 C 0 I 1632 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=1515.000000 s hg38.chr19_GL949753v2_alt 9264 8 + 796479 CAGATCGT s panTro4.chr19 58946100 8 + 63644993 CAAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813211 8 + 60714840 CGGATCAT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e chlSab2.chr6 46720656 1632 + 50890351 I e papAnu2.chr19 47008142 1767 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59867428 2658 + 64156825 I a score=456334.000000 s hg38.chr19_GL949753v2_alt 9272 355 + 796479 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggcgtgaggcatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt s panTro4.chr19 58946108 355 + 63644993 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatatttgaagagatttattttgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccaaggtggtcggggggcagcttggttttatacattttagggaggtgtgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattgattgagtttgtctaaagacctgggattaatagagaggaaatattcaggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813219 355 + 60714840 ATCACATATCAAGACTTACTCTtgttgacaaaaagagtcaaactctataaaatattagaagagatttattctgagccaaatatgataa---------------tgaccatggcccctgacacagccctaaggaggtcctgagaccatgtacccgaggtggtcggggggcagcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaaggctggacaatttgaaggaggcagggccttccaggctttaggtaaattaaaacattttctggttgacaattggttgagtttgtctaaagacctgggattaacagagagggaatattcaggtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59870086 370 + 64156825 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaactctataaaatatttgaagagatttattctgagccaaatatgataatgaaccaaatatgagtgaccatgggccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagcctggacaatttgaaggaggcaggggcctccaggctttaggtaaattaaaacattgtctggttgacaattggttgagtttgtctaaagacctgggattaatagacaggaaatattcaaggt i rheMac3.chr19 I 2658 C 0 s papAnu2.chr19 47009909 355 + 51301725 atcacatATCAAGACTTACTCTTGTCGACAGGAAGAATCAAACTCtataaaacatttgaagagatttattctgagccaaatatgataA---------------TGACCGtggcccgtgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgagacatcaatcaaacacatttgagaaatacattggtttggtccagaaagccTGGACAATTTGAAGGAGGCAGGGGCTTCCAGGCTTTAGGTAAATTAAAACATtgtctggttgacaattggttgagtttgtctaaagacctgggattaaTAGACAGGAAATATTCAAGGT i papAnu2.chr19 I 1767 C 0 s chlSab2.chr6 46722288 351 + 50890351 ATCACATATCAAGACTTACTCTtgtcgacaagaagaatcaaattctataaaatattggaagagatttattctgagccaaatatgataa---------------tgaccgtggcccatgacacagccctcaggaggtcctgagaacatgtacccaaggtggtcggggggcatcttggttttatacattttagggaggcatgaaac----atcaaacacttttgagaaatacattggtttggtccggaaagcctggacaatttgaaggagacgggggcttccaggctttaggtaaattaaaacattgtctgattgacaattggttgagtttgtctaaagacctgggattagtagacaggaaatattcaaggt i chlSab2.chr6 I 1632 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e nomLeu3.chr10 102575662 2352 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=457507.000000 s hg38.chr19_GL949753v2_alt 9627 260 + 796479 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaagttgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt s panTro4.chr19 58946463 261 + 63644993 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgagaaatgtttcctactcagaccttcaaaagctgctagattctcagttaacctcctcaggattgggaggtttcctggaggaaaaagatctagcaatgttaacagagatcctttacatatgcaaatatt-ccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813574 260 + 60714840 aagataaaagattgtggagaccaaggttc-ttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcagttaacctcctcaggattgggagg--tcctggaggaaaaagatctacctatgttaacagagatcctgtacatatgcaaatattcccccccaccaaggacagctttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578014 261 - 106955855 aaaaaaaaagactgtggaaaccaaggttctttttgaagtcttatagtggctgcccttagagacaatagatgacaaatgtttcctactcagaccttcaaaaggtgctagattctcggttaatctcctcaggattgggggg--tcctggaggaaaaagatctagctatgttaacagagatcttttacatatgcaaatattcccccccaccaaggacagttttgcagggccatttaaaaatatggcaaagaaacatgttttggggt i nomLeu3.chr10 I 2352 C 0 s rheMac3.chr19 59870456 260 + 64156825 aagataaaagactgtggagaccaaggttc-tgttgaagtcttgtagcggctgcccttagagacaatagatgacaaatgtttcctactcagaccttccaaaggtgctagattctcagttaatctcctcaggattgggagg--tcctggaggaaaaagatctagctaggttaacagagatcctttacatatgcaaatgttctccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010264 260 + 51301725 AAGATAAAAGactgtggagaccaaggttc-tgtTGAAGTCTTATAgcggctgcccttagagacaatagatgacaacTGTTTCCTACTCAGACCTTCCAAAGGTGCTAGATTCTCAGTTAATCTCCTCAGGATTGGGAGG--TCCTGGAGGAAAAAGATCTAGCTAGGTTAACAGAGATCCTTTACATATGCAAATGTTCCCCCCAACAAAGGACAGCTTTGTagggtcatttaaaaatatggcaaagaaacatggtttggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722639 259 + 50890351 aagataaaagactgtggagaccaaggttc-tgttgaagtcttatagcggctgcccttagagataatagatggcagatgtttcctactcaggccttccaaaggtgctagattctcagttactctcctcaggattgggagg--tcctggaggaaaaagat-gagcgaggttaacagagatcctttacgtatgcaaatgttccccccaacaaaggacagctttgtagggtcatttaaaaatatggcaaagaaacatggtttggggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19457595 38 - 122678785 I e calJac3.chr22 45291066 1315 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=413592.000000 s hg38.chr19_GL949753v2_alt 9887 188 + 796479 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagaccccagaccccttagataagaatctgggcaagat---------aaaaaaaaaaaatcagagctgagtcctca s panTro4.chr19 58946724 194 + 63644993 aaaatatttttattttcttctttgttaggt--aacgttatgccagagtcagattggaaagtaagtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagcccccagaccccttagataagaatctgggcaagatt---aaaaaaaaaaaaaaaaatcagagctgagtcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55813834 190 + 60714840 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagtaagtcatga----tatatagggctaaataaaacccatctgatgagaatttatagtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat-------aaaaaaaaaaaaaatcagagctgagtcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578275 195 - 106955855 aaaatatttttattttcttctttgttaggtaaaatgttatgccggagtcagactggaaagtaagtcacga----tatatagggctaaatacgacacatctgatgagaatttgtggtttgtagggcatgagtccccagaccccttagataagaatctgggcaagat----gaaacaaaaaaaaaaaatcagagatgagttctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870716 197 + 64156825 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcacgtcgcga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcgagattaaaaaaaaaaaaaaaaaaaatcagagctgagtcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010524 192 + 51301725 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattggaaagcaCATCGCGA----TATATAGGGCTAAATAAaccccatctgatgagaatttatggtttgtagggcatgagtCCCCAGACCCCTTAGAGAAGAATCTGGgcgagatt-----aaaaaaaaaaaaaaatcagagctgagTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46722898 195 + 50890351 aaaatatttttattttcttctttgttaggt--aatgttatgccagagtcagattgtaaagtacgtcacga----tatatagggctaaataaaacccatctgatgagaatttatggtttgtagggcatgagtccccagaccccttagagaagaatctgggcaagatt--taaaaaaaaaaaaaaaatacagagctgagtcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292381 189 + 49145316 aaaatgtttttcttttcttctttgttatgt--cacgttatgtcagagtcaggttggaaagtaagtcacgatatttatttaggatcaaataaaacccatctgatgagaatttgtgctttgtggggcctgactccccagaccctttagatgggaatttgggcaagat------------aaaaacaaatcagagcttagttctca i calJac3.chr22 I 1315 C 0 e canFam3.chr1 19457595 38 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1201027.000000 s hg38.chr19_GL949753v2_alt 10075 478 + 796479 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCTATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGAGGGGGAGC s panTro4.chr19 58946918 477 + 63644993 CTATGGTAATTCAGTGAGTGTGACTACCAGCATGGATGTCCATAAAGGATATCCATTAGGGCCACCCATTTTAATAATGTTTGCCAGGACCCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAATTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTAAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCC-ACCTTGCTACTCCCCATGTGGCCTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814024 478 + 60714840 CTATGGTAATTCAGTGAGTGTGACTACCAGCATAGATGTCCATAAAGGCTATCCATTAGGGTCACCCATTTTAATAATGTTTGCCAGGACTCTTCAATCAAACCAAAATCCATTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CCAGAAGGATTGGGCAAGAAAACTGCATGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAAAGAGACACTCCTCCCCTACCTTGCTACTCCCGGTGTGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578470 478 - 106955855 CTATGGTAATTCAATGAGTGTGACTACCAGCATAGATGTCCATAAAGAATATCCATTAGGGTCACCCATTTTAATAATGTTCACCAGGACTCTTCAATCAAAACAACATCCACTCTCAGAATAGCTTAGAATCAAAGGAGGACTTTCTGGG-----------TTTT----------------------------------------------------------------------------------------TTT---------GGTT--CAAGAAGGATTGGGCAAGAAAACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCACTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGCCACCAAGAACTCCTAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACGCAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGCGGCTTCCACAC---TGCAACCTGGGACTGTGTA--GTGAGGGGA-GGGGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59870913 497 + 64156825 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGTTTTCTG-----TTTTGTT---TTT----------------------------------------------------------------TTT--------TTTTTTT---------GGTT--CAAGAATGATTGAGCAAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCTTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTATGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47010716 500 + 51301725 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGGTGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGgactttttggttttctgtttttttttttt---ttt----------------------------------------------------------------ttt--------ttttttt---------ggtt--caagaaTGATTGAGCAAGAACACTGCAGGGAGTGA-GGGAATGCTGAACTTTGGAAGCAATTAgaaccaagaaaacaaaagctgaaagccttGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGCGAGACAGATGGTCACCAAGAACTCCCaagctttaaaaagaatgacTCTCTGTGGCAAGAAAACAGAGAG--ACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCCACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723093 487 + 50890351 CTATGGTAATTCAATGAGTGTGACTCCCAGCATAGATGTCCATAAAGGATATCCATTAGGGTCACCCATTTTAATACTGTTTGCCAGGACTCTTCAATCAAAACAAAATCCATTCTCAGAATAGCTGAGAATCAAAGGAGGACTTTTTGGT-----------TTTTGGT---TTT----------------------------------------------------------------TTT--------TGGGGGG---------GGTT--CAAGAATGATTGAGCGAGAACACTGCAGGGAGTGA-AGGAATGCTGAGCTTTGGAAGCAATTAGAACCAAGAAAACAAAAGCTGAAAGCCCTGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAATCATCTTTGTGTTTCTCCATAAAGACTGGCTTCCTCCACATGGTGAGACAGATGGTCACCAAGAACTCCCAAGCTTTAAAAAGAATGA----CTGTGGCAAGAAAACAGAGAGACACTCCTCCCCCACCTTGCTACTCCCCATGTGGCTTCTACAC---GGCAACCTGGGGCTGTGTA--GTGAGGGGA-GGGGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45292570 553 + 49145316 CTGTGGTAATTAAA--AGTCAGACTCCCAGCAGAGATGTCCATAAGGGACCTCCATTAGGGTCATCAGTTTTTA---TGTTTGCCAGGACTCTTCGATCAAAACAAAATCCATTCTCAGCATAGCTTAGAATCAAAGGAGGACTTTTTGGG-----------TTTTTTT---TTTGGTTCA----AGAATGATTGAGCAGGAAAGCTGCAGGGAGCAGAGGGATGCTGCAAAGGAGGACTTT---CTGGGTTTTTTT---------GGTT--CAAGAATGATTGAGCAGGAAAGCTGCAGGGAGCAG-AGGGATGCTGAGCTTTGGAAGCAATTAAACCCGAGAAAACAAAAGCTGAGAGCACCGTTACTCACTCCCGCTTCCCGGATGCTCCCTGAGTCATCTCTGTGTTTCTGCATCAAGACTGGCTTCCTTCACATGGCGAGACAGATGGCCACCAAGAACTCCCAAGCTTTAAAAAGAATGACTCTCTGTGGCAAGAAAACAGAGAGACACTCCTCCCGCACCTTGCTACTCCCCATGTGGCTCCCACAC---CTCAACTTGGGGCTGTGTAGTGTGAGGGGA-GGGGAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19457633 516 - 122678785 CTGTAGTGATTT----AGGGTGAATACTGGAGTGGATGTCCATAAATGATATCTGTTAGGGCCGTTGATTTTAACAAGATTTGTCCAGACTCTGC--TCAACACAAAATCTTTTCTTAGACAAGCTCTGACTTAAA--AAACTTTTTTGGG-----------TGTCatttaatttaatttaatttaatttaatttaatttaa-------------------------------------tttaatttaatttTTTTTTCTCTCAGAGGTTTCCAAGAATGATTGAACAAGAAAGCTGCATGGAGAGAGGGGGATGCTGAGTTTTGGAAGCAGTCAGAAGCAAGAAAACAAAAGCTGCAGGCACTCCATCTC-------CTCCGCGGATGCT--CTGAGTCATCTTCTGGTTTCTTGTTAAAGACCTGCTTCCTCCACATGGTGAGACAGATGGCCACCAAGAGCTCCCAAGTTTTAAAGAGAATGA-TTTCCCCGACGAGGGAAC--AGAGGCACTGCTCCCCCATC-CGCTACTCC--------CTCCAGCACCTTGTCAGCCAGGGGGTGTGCA--GGGAGTGGAGGGGGTGC i canFam3.chr1 I 38 I 2044 e macFas5.chr19 54882420 20327 + 59248254 M a score=115955.000000 s hg38.chr19_GL949753v2_alt 10553 52 + 796479 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag s panTro4.chr19 58947395 52 + 63644993 GAAGAAGTTtgcgttagtccattttcacactgctgataaagacatacctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814502 52 + 60714840 GAAGAAGTTtgcgttagtccgttttcacgctgctgataaagacatacctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102578948 52 - 106955855 GAAGAAGTTtgcgttagtctgttttcacactgctgataaagacatacctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871410 52 + 64156825 AAAGAGGTTtgcattagtgcgttttcacaccgctgataaagacatacctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011216 52 + 51301725 AAAGAGGTTTGCATTAGTCCGTGTTCACaccgctgataaagacatacctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723580 52 + 50890351 AAAGAGGTTtgcattagtccgttttcacattgctgataaagacatacctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45293123 52 + 49145316 AAAGAGGTTtgcattcgtccatttccacactgctgatgaaaacacagctgag i calJac3.chr22 C 0 I 2087 e canFam3.chr1 19458149 2044 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8022.000000 s hg38.chr19_GL949753v2_alt 10605 4 + 796479 actg s panTro4.chr19 58947447 4 + 63644993 actg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814554 4 + 60714840 actg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579000 4 - 106955855 actg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871462 4 + 64156825 actg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011268 4 + 51301725 actg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723632 4 + 50890351 actg i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=11806.000000 s hg38.chr19_GL949753v2_alt 10609 10 + 796479 agtaatttat s panTro4.chr19 58947451 10 + 63644993 agtaatttat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814558 10 + 60714840 ggtaatttat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579004 10 - 106955855 ggtaatttat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871466 10 + 64156825 gataatttat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011272 10 + 51301725 gataatttat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3640.000000 s hg38.chr19_GL949753v2_alt 10619 4 + 796479 tttt s panTro4.chr19 58947461 4 + 63644993 tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814568 4 + 60714840 tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579014 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59871476 4 + 64156825 tttt i rheMac3.chr19 C 0 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=151125.000000 s hg38.chr19_GL949753v2_alt 10623 310 + 796479 atttttatttttatttatttattt-ttttgagacg------cactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccggggtcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcactgtgttatccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccagagt----gctgggattacaggcgtgagccactgcgcccagtcagttta-c s panTro4.chr19 58947465 317 + 63644993 gtttttatttttatttatttatttattttgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctgggcctcccagagt----gctgggattacaggtgtgagccactgcacccagtcagttta-c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814572 315 + 60714840 atttttatttttatt--tttattt-tttcgagacggagtctcactctgtcacccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccgggttcaggccattctcctacctcagcctcccgagtagctgggactacaggcgcccgccaccgcgtccagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccacctcagcctcccaaagt----gctgggattacaggcgtgagccactgcgcctggccagtttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579018 317 - 106955855 attttta--tttatttatttatt--ttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctccccggttcacgccattctcctgcctcagcctcccaagtagctgggactccaggtgcccacaaccacacccggctaattttttgtatttttagtagagacggggtttcatcgtgttagccaggatggtctcgatctcctgacctcgtgatctgcccgcctcagcctcccaaagtgctggctgggattacaggtgtgagccactgcacccggccagttta-t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e chlSab2.chr6 46723636 7 + 50890351 I e papAnu2.chr19 47011282 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=6633.000000 s hg38.chr19_GL949753v2_alt 10933 7 + 796479 tttttaa s panTro4.chr19 58947782 7 + 63644993 tttttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814887 7 + 60714840 tttttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579335 7 - 106955855 tttttaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47011282 7 + 51301725 tttttta i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46723643 5 + 50890351 --tttta i chlSab2.chr6 I 7 I 2 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59871480 2 + 64156825 I a score=196784.000000 s hg38.chr19_GL949753v2_alt 10940 120 + 796479 aaaagaggtataacggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa s panTro4.chr19 58947789 120 + 63644993 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcagaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55814894 120 + 60714840 aaaagaggtgtaatggactt-acagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaaatgagagagccaagcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102579342 117 - 106955855 aaaagaggtataatggacttaacagttccacacgggt-gggaggcctcacaatcacggcggaaggtgaaaggcacat----cttacatggtggcagacgacagagaa---aatgatacaagcaaa i nomLeu3.chr10 C 0 I 1816 s rheMac3.chr19 59871482 124 + 64156825 aaaaaaggtataatggactc-acagttccacatggctggggaggcctcacaatcatggtggaaggtaaaaggcacatcttacttacatggtggcagacgagagagaaacgagagagccacgcaaa i rheMac3.chr19 I 2 C 0 s papAnu2.chr19 47011290 118 + 51301725 aaaaagagtataatggact---cagttccacatggctggggaggcctcacaatcatggcggaaggtgaaaggcacat----cttacatggtggcagacgagAGAGAAACGAGAGAGCCacgcaaa i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46723650 120 + 50890351 aaaagaggtataatggactc-ccagttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacat----cttacatggtggcagatgagagagaaatgagagagccacgcaaa i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1212482.000000 s hg38.chr19_GL949753v2_alt 11060 1036 + 796479 aggggaaacccgttataaaaacctcagctctcctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaagagactgaaggcacaaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattactctttgctgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcgtgcatcagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagacggtgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacactccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaagaaatagtgaaagtcttaaagtctttgatctttcttataagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagagggaagggccccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgcgtcttgatggttgtggtcctccgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccata-----ggaccctgca s panTro4.chr19 58947909 1039 + 63644993 aggggaaacccgttataaaaacctcagctcttctgagacttgttcactaccatgagaacggcatgggggaatgtgtgggtggaggattagccaggtgctgaggcaaaagactgaaggcaccaactgttgcagtataataaagaaaa----tagaataagaatagtcataatacaaattagatgtagagatgatcatggacaattatcaatcattattataaacattattaatcattagcttttaatattattctttgttgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcccgcataagggccgcttgaggggtccttggtcaagcggtaacgccagtgtctgggaaggcacccgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaacactctgctccaccagcttcttgtggaaggctggatattatccaggcctgcc--cagtcatctggaggcctaaacccctccctgtggtgctgtgcttcagtgctcacgctccttgtccactttcatgctcctcccgtactcctggctcctctttgaagttcatagtagatagcggtagaaggaatagtgaaagtcttaaagtctttgatctttcttagaagtgcatggaagaaaacgctgacgtatgctgccttctccctctctctctgcttcggctacctaagaggaaagggtcccctctcctgtgatcacacgacttgcttcaccttgtcaatcacttcgaagattcaccctgcttaccctgcccccttatcttgtatgcaataagtatcagcgcgcccagccgttatgggccactaccggtctccgagtcttgatggttgtggtccccccggcccagctgttttctctttatctctttgtcttgtgtctttatttcctacaatctcttatctctgcacacggggagaacacctgcaaagccccatagggctggaccctgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55815014 1042 + 60714840 aggggaaacctgttataaaaacatcagctctcttgagacttgttcactaccatgagaacagcatgggggaatgtgtgggcgaaggattacctaggtgcccagccaagagactgaaggcacaaactgttgcggtataataaagaaaatagttagaataagaata-tcatgatacaaattagatatagagatgatcatggac-attatcaatcattattataaacattattaatcattagcttttaatattactcttcgttgcattactaatataacctaggaataaccggcaggtat-gggtcaggtgctgaagggacatggtgagaagtgacctagaaggcaagcggtgacctctctgtcacgcccgcataagggccacttgaaggctccttgctcaagcggtgacgccagtgtccgggaaggcacccgttacttagcagaccgcgaaagggagtctc-atttccttggaggagtcagggaacactctgctccaccagcttcttgtgggaggctggatgttatccaggcctgcccgcagtcatccggaggcctaaacccctccctgtggtgctgtgcttcaatgctcacgctccttgtccactttcatgctcctcccttactcctgcctcctctttgaagtttgtagtagatagcggtagcggaaatagtgaaagtcttaaaggctttgatctttcttataagtgcatagaagaaaacactgacatatgctgccttctctctctctctctgcttcccctacctaagagggaagggccccctgtcctgtgatcacgtgacttgcttcaccttatcgatcacttagaagattcaccctccttagcctgcccccttgtcttgtatgcaataaatatcagcgcgcccagccgtttggggccactaccggtctccgcgtcttgatggttgtggtcagctgggcccagctgttttctctttatctctttgtcttgtgtctttatttcttacaatctcttatctctgcacacggggagaacacctgcaaagccccgcagggctggaccctgca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59871606 979 + 64156825 aggggaaacccctt----agatgtcagctctcgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggtggagggtggcccaggtgcccaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagaatagtcataatacaaattagatatagaggtgatcgtggac-attatcaatcattattataaacattattaa--------------------------------------------------------ggcaggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccctctgtcacacctgcataagggccatttgaggtctccttggtgaagcagtaacgccagtgactgggaaggcacccgttacttagcagaccatgaaagggagtctctctttccttggaggagtcagagaacactctgctccaccagcttcttgtgggaggctggatattatccaggcctgcccgtagtcatccggaggcctaaacccctccgtgtggtgctgtgcttcagtggtcacgctccttgtccgctttcatgttcctcccgtactcctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgtatgctgcct------actgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttatcaatcacctggacaactcaccctccttaccctgcccccttgtcttgtatgcaataaatatcagcacgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccaggtgctttctctttatctctttgtcttgtgtctttatttcttacaatctctggtctccgcacatggggagaacgcctgcaaagccccgtagggctggaccctaca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47011408 1031 + 51301725 aggggaaaccccttagaGAGATGTCAGCTCtggtgagacttgttcactaccgcgagaatagcatgggggaatcTGGGGGCGGAGGGTGGCCCAGGTGCCcaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttagaataagagtagtcataatacaaattagatatagaggTGATCGTGGAC-ATTATCAATCATTATTATAagcattattaatcattagcttttaatattactctttgttgCGTTACTAATATAACCTAGGAATAACGGGTGGGTATagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagcccTCTGTCACACCTGCATAAGGGCCATTTGAGGGCTCCTTGGTGAAGTGGTAGCGCCAGTGTCTGGGAAGGCACCTGTTACTTAGCAGACCCCGAAagggagtctc-ctttccttggaggagtcagggaacgctctgctccaccagcttcttgtggaAGGCTGGATATTATTCAGGCCTGCCTGCAGTCATCCGGAGGCCTAAACCCCTCCGTgtggtgctgtgcttcagtggtcatgctccttgtccactttcatgCTCCTCCCgtactcctggttcctctttgaagttcgTAGTAGACAGCGGTAGA------AGTGAGagtcttaaagtctttgatctttcttataagtgcatagaagaaaatattgacgTATGCTGCCT------GCTCTCTCTGCTTCGGCTACCTGtaagggaagggccccctgtcccATGATCACGTGATTTGCTTCACCTTATCAATCACCTGGACAACtcaccctccttaccctgcccccttgtctTGTATGCGATAAACATCAGCACGTCCAGCCATTCGGGGCCACTACCAGTCTCCGcatcttggtggtagtggtccccacGGCCCAGcgtctctctctttatctctttgt-ttgtgtctttatttcttacaatCTCTGGTCTCCGCACATGGGGAGAACACCTGCAAAGCCCtgtagggctggaccctaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46723770 1037 + 50890351 aggggaaaccccttagagagacgtcagctcttgtgagacttgttcactaccgcgagaatagcatgggggaatctgtgggcggaggatggcccaggtgccgaggcaagagactgaaggcacaaactgtttcagtataataaagaaaatagttggaataagagtagtcgtaatacaaattagatatagaggtgattgtggac-attatcaatcattattataaacattattgatcattagcttttaatattactctttgttgcattgctaatataacctaggaataacgggtgggtatagggtcaggtgctgaagggacattgtgagaagtgacctagaaggcaagaggtgagccttctgtcacacccgcataagggctgcttgagggctccttggtgaagcggtagcgccagtgtctgggaaggcacctgttacttagcagaccgcgaaagggagtctc-ctttccttggaggagtcagggaatgctctgctccaccagcttcttgtggaaggctggatattatccaggcctgtccacaatcatccggaggcctaaa-ccctccctgtggtgctgtgcttcagtagtcacgctctttgtccactttcatgctcctcccatacccctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgagagtcttaaagtctttgacctttcttacaagtgcatagaagaaaatattgacgtatgctgcct------gctgtctctgcttcggctacctgtaagggaagggccccctgtcccatgatcacgtgatttgcttcaccttattaatcacctggacatgtcaccctccttaccccgcccccttgtcttgtatgcgataaatatcagcgcgtccagccgttcggggccactaccagtctccgcgtcttggtggtagtggtccccacggcccagctgctttctctttatctctttgtcttgtatctttatttcttacaatctctggtctccgcacatgaggagaacacctgcaaagccccttagggctgggccctaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45293175 2087 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1257558.000000 s hg38.chr19_GL949753v2_alt 12096 753 + 796479 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattattgaggcagacagtgagggtaagagagtcctcagtaaggtttcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacgtaataaaagattagggtgggatggccagcttctttgggggctatgcaaacgtcatacctggtccgactaatctctcaggccctatgtaaatcagacagcacctcctcaagcttgtctataaaagccccatgcatttcaccacaaaaccaggggtcccactcgggaacccctctcttctct-- s panTro4.chr19 58948948 734 + 63644993 ggaatccacccccgtgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGGTTGTTCCTTCAGATGCAGCAATCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACGGCTTCATGGGtattgtaaactcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaattatttaggcagacagtgagggtaagagagtcctcagtaaggtttcctgttaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaatcttgcat-------------cagctgtgccaatagaaaacggatgcctgggagccgggtatattcaacatggaggttccctcttcccttttctttgtccccacatgtgcagtaaaaaagcagacaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacgtcatacctggtccgactaatctctcaggccctgtgtaaatcagacaccacctcctcaagcttgtctacaaaagccccatgcatttcaccacaaaaccagggg-------------------tcttctct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816056 765 + 60714840 ggaatccacccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaattgaagatgagatttgggtggggacacagacacaagccatatATCAAGTTTGTTCCTTCAGATGCAGCATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-AGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacctaacccca--aggtgatggtattTGtaacacaggagctaaaaagaaattatttaggcagacagtgagggtaagagtgtcctcggtaagttctcctattaataaagagcagcccccaaataatttcttttctaacagaaagcagcctgaaacatcaagctgcaagcatagataaacaagctaaaagcttgcataggtaaatgccggcagctgtgccaatagaaaacggatgcctggaagccgggtatattcaacatggaggttccctcttcccttttctttgtccccatatgtgcagtagaaaagcaggcaacatggccccggccaggcagagaccctacctacataataaaagattagggtgggatggccagcttctttgtgggctatgcaaacatcacacctggtccgactaatctctcaggccctatgtaaatcagacaccacctcctcaagcttgtctataaaagccccatgcatttcaccacgaaatcaggggtcccactcgggcactcctctc-tctct-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59872585 762 + 64156825 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaaaacatgggaattatgggagctaccattaaagatgagatttgggtggggacgcagacacaagcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgctttaggcagacagtgagggtaagagagtcctccgtatggtttcctgtgaataaagagcagtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcagctgtgccaatagaaaagggatggctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaaacaggcaacgtggccccagccgagcagagaccccacctatgtaataaaacattagggtgggatagccagcttcttcgtgggttatgcaaacgtcacacctggtccggctaatctctcaggccctatgtaaatccgacaccacctgctcaagtttgcctattaaa-ccccatgcatttcaccatgaaaccaggcatcccactcgggagcccctctc-tatct-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47012439 762 + 51301725 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctaccattgaagatgagatttgggtggggacgcagacACAAGCC--TTATCAAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGCTTCATGGGTATTGTAAATTCAATGTTTGTGTCCCGACAAAATTCAGCTGTTGGAACTtaacccca--aggtgatggtatttgtAATACGGGAGCTAAAAAGAAATGCTTTAGGCAGACAGTGAGGGTAAGAGAGTCCTCCGTAAGGTTTCCTGTGAATAAAGAGCAgtccccaaatcatttcttttctaacagaaagCAGCCCGAAACATCAAGGTGCAGGCCTAGACAAGCAAGCTAAAAGCTTGCATAGGTaaatgctggcagctgtgccaatagaaaagggatGGCTGGAGGCCGGGTATATTCAACATGGAGGTTCCCTCTTCCCTTTTGTTTGTCCCCACATGTGCAGTaaaaaaaCAGGCACCGTGGCCCCAGCCAGGCAGAGACCCCACCTACGTAATAAAACATTAGGGTGGGATAGCCAGCTTCTTCGTGGGTTATGCAAACGTCACACCTGGTCCGGCTAATCTCTcaggccctatgtaaatcagacaccacctgcTCAAGCTTGCCTATTAAA-CCCCATGCATTTCACCACGAAACCAGGCATCCCACTCGGGAGCCCCTCTC-TATCT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46724807 761 + 50890351 ggaatccgcccccatgattgaattatctcccactgggtccatcccacaacacatgggaattataggagctaccattgaagatgagatgtgggtggggacgcggacacaggcc--ttatcaAAGTTGTTCCTTCAGATGCAATATTCCTGGGAGCTTCTGGTTAGGACAAGATACAAGC-GGAGACAGTTTCATGGGtattgtaaattcaatgtttgtgtcccgacaaaattcagctgttggaacttaacccca--aggtgatggtattTGtaatacgggagctaaaaagaaatgatttaggcagacagtgagggtaagagagccctcc-taaggtctcctgtgaataaagagccgtccccaaatcatttcttttctaacagaaagcagcccgaaacatcaaggtgcaggcctagacaagcaagctaaaagcttgcataggtaaatgctggcatctgtgccaatagaaaagggatgcctggaggccgggtatattcaacatggaggttccctcttcccttttgtttgtccccacatgtgcagtaaaaaagcaggcaatgtagtcccagccaggcagagaccccacctatgtaataaaagattagggtgggatagccagcttcttcgtgggctgtgcaaacgtcacacctggtccgattaatctctcaggccctatgtaaatcagacaccacctgctcaagcttgtctatcaaa-ccccatgcatttcaccacgaaaccaggggtcccactcgggagcccctctc-tatct-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45295262 765 + 49145316 ggaatctgcccccacgattgaattatctcccactgggtccatcccacaacacatgggaattatgggagctacaactgaagatgagatttgggtggggacacagacacaagcc--atatcaAGGTTGTTCCTTCTGTTGCAGCATTCCTGGGAGCCTCTGGTTAGGACAAGAGTCAAGCGGGGGACAGCTTCATGGGtattgtaaactcagtgtttgtgtcccgacaaaactcagatgctggaacctaaccccaacagctcacggtattagtaatacaggagctaaaacgaaattatttaggcagacagtgagggtaagacagtcctcagtaaggttttccattcctaaagagcagcccccaaatcgtttcttctctaaaagaaagcagcctgaaaaatcaaggtgcaagcatagataagcaagctaacagcttgcataggtaaatgccagcagctgtgcccgtagaaaagggataccctggagcagggtttattctacatggaggctcactctccctttttctttgtccccacatgtgcagtaaaagagcaggaaacatggccctggcgaggtagagaccccacctgc---atgaaagattggggtgggatggcctgcttcttcatgggctatgcagacgtcacagctggtccaaccaatctctcaggccctatgtaaatgagacactgcctcctcaagctcatctataaaactcctgtgcatttcaccacaagatcggaagtcccactcgggagcctctctc-tctctCT i calJac3.chr22 I 2087 I 2053 e canFam3.chr1 19458149 2044 - 122678785 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=36035.000000 s hg38.chr19_GL949753v2_alt 12849 33 + 796479 gtgcaaaagagaga--actattctcttttctcttt s panTro4.chr19 58949682 33 + 63644993 gtgcaaaagagaga--actattctcttttctcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816821 33 + 60714840 gtgcaagagagaga--actattctcttttctcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59873347 35 + 64156825 gtacgagagagagagtgctattctcttttctcttt i rheMac3.chr19 C 0 I 66 s papAnu2.chr19 47013201 33 + 51301725 GTACGAGAGAGAGa--gctattctcttttctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725568 31 + 50890351 gtacgagtgaga----gctattctcttttctcttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M a score=19704.000000 s hg38.chr19_GL949753v2_alt 12882 29 + 796479 cttttgcttattaagccttcactc-----ttttt s panTro4.chr19 58949715 31 + 63644993 cttttgcttattaagccttcactc---ttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816854 34 + 60714840 cttttgcttattaagccttcactccCtttttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013234 27 + 51301725 cttttgtttattaagccttcactt-----ttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725599 29 + 50890351 cttttgtttattaagccttcactt-----ttttt i chlSab2.chr6 C 0 I 76 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=19758.000000 s hg38.chr19_GL949753v2_alt 12911 47 + 796479 tttttttttttttttgagatggagtctggctctgtcattcaggctgg s panTro4.chr19 58949746 47 + 63644993 tttttttttttttttgagatggagtctggctctgtcattcaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816888 47 + 60714840 ttttgttttttttttgagatggagtctggctctgtcattcaggctgg i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47013261 43 + 51301725 ttaaattttatttttgagcaggagt----ctctgtcattcaggctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=5251.000000 s hg38.chr19_GL949753v2_alt 12958 20 + 796479 agtgcagtggcacgatttcg s panTro4.chr19 58949793 20 + 63644993 agtgcagtggcacgatttcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816935 20 + 60714840 ggtgcagtggcacaatttcg i ponAbe2.chr19 C 0 I 40 e canFam3.chr1 19458149 2044 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=4133.000000 s hg38.chr19_GL949753v2_alt 12978 45 + 796479 gctcacttcaacctccgcctcccaggtgcaagcaattctcctgcc s panTro4.chr19 58949813 45 + 63644993 gctcactgcaacctccgcctcccaggtgcaagcaattctcctgcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e nomLeu3.chr10 102579459 1816 - 106955855 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=26871.000000 s hg38.chr19_GL949753v2_alt 13023 105 + 796479 tcagcctcccaagtagctgggatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtttc s panTro4.chr19 58949858 105 + 63644993 tcagcctcccaagtagctgagatgacaggcacccaccactgcgcccagctaatttttatatttttagtagagatggggttt-caccgtgttggtcaggctggtctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581275 106 - 106955855 tcagcctcccaagtagctgggattacaggcacccaccactgttcccagctaatttttgtatttttagtagagacggggtttccaccatgttggtcaggctggtctc i nomLeu3.chr10 I 1816 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59873382 66 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 13128 1 + 796479 g s panTro4.chr19 58949963 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581381 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873448 1 + 64156825 g i rheMac3.chr19 I 66 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e papAnu2.chr19 47013304 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=22129.000000 s hg38.chr19_GL949753v2_alt 13129 36 + 796479 aactcctgatctcaggtgatccgc-cccccactcggt s panTro4.chr19 58949964 36 + 63644993 aactcctgatctcaggtgatccgc-cccctactcggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581382 37 - 106955855 aacttctgatctcaggtgatccgtgcccctactcggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873449 35 + 64156825 aactcctgacctcagttgatcct--ccccgcctcgac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013304 35 + 51301725 aactcctgacctcagttgatcct--ccccgcctcgac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e chlSab2.chr6 46725628 76 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=369809.000000 s hg38.chr19_GL949753v2_alt 13165 296 + 796479 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccatgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG s panTro4.chr19 58950000 296 + 63644993 ctcccaaagtcctgagattacaggcgtgagccactgcacccggccCAGTCTAtttcactatgtaaggacacagcaagaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaatctaccagtgctttggtcttggacttccagcctccagaaccgtgagaaataactatgtattgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCCCTCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581419 290 - 106955855 ctcccaaagtcctgagattacaggcgtgagccactgcgcccggccCAgtctctttcactatgtgaggacacagcaggaaggtgccagctatgaaccaggaaaaaagccctcagcagacactgaacctaccagtgctttggtcttggccttccagcctccagaacggtgagaaataactatgtgttgtctgtaagctgccaggtctttggtatgttgatagcagcctggatggactaagacaCTCTCTCCTTCC------TGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873484 292 + 64156825 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggatacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagtgcttgggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtagattgatagcagcctggatggactgagacGCTCCTTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013339 292 + 51301725 ctcccaaattgctgagattacaggcgtgagccactgcgccctgcccagTCTCTTTCActacgtgaggacacagcaagaaggtgccagcTATGAACCAGG-AAAAAGCCCTCAGCAG--ACTGAATCTACCAGCGCTTTGGTCTTGGACTTGAAGGCTTCAGAACGGTGAGAAATAACTATGTGTTGTCTGGAAGCTGCCTGGTCTTTGGTACGTTGATAGCAGCCTGGATGGACTAAGacgctccctcctccc-tctcatgCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725704 292 + 50890351 ctcccaaattgctgagattacaggcgtgagccactgcgccctgccCAgtctctttcactacgtgaggacacagcaagaaggtgccagctatgaaccagg-aaaaagccctcagcag--actgaatctaccagcgctttggtcttggacttgaagccttcagaacggtgagaaataactatgtgttgtctggaagctgcctggtctttggtacgttgatagcagcctggatggactaagacGCTCCCTCCTCCC-TCTCATGCCCTGGACCCTCATCAGGGCCAGAAGTGGTTGGGG i chlSab2.chr6 I 76 C 0 e canFam3.chr1 19458149 2044 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=136227.000000 s hg38.chr19_GL949753v2_alt 13461 91 + 796479 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACGCTAGA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT s panTro4.chr19 58950296 91 + 63644993 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAGGGTTGGCACACTGCA-GCCCACAGCTTGTTTTTGCAAATAAAATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581709 91 - 106955855 TGATGGCCCAAGCAGACTTTAAAAAGCACTGGCCTAGCACAAAGGTTGGCACACTATA-GCCTACAGCTTGTTTTTGCAAATAAAATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873776 91 + 64156825 TGATGGCCCAAGCAGACTTTTAAAAGCACTGACCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47013631 91 + 51301725 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGcttgtttttgaaaacaaaatgtttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46725996 91 + 50890351 TGATGGCCCAAGCAGACTTTTAAAAGCACTGGCCTCGCACAAGGGTTGGAACACTACA-GCCCACAGCTTGTTTTTGAAAACAAAATGTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19460193 88 - 122678785 TGGTGATTCATTCAGATTTCAAAAAGCATTGGTCTAGGACAGGTGTTGGCA----ACAggcccatcacttgtgtttgtaaataaagtttttt i canFam3.chr1 I 2044 I 3674 e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=264025.000000 s hg38.chr19_GL949753v2_alt 13552 218 + 796479 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat s panTro4.chr19 58950387 218 + 63644993 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcactatgggaagccgaggcaggcggatgacttgaggtcaggagctcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagcctggtgtgatggcagaagcttgtaatcccagctactcaggaggctgagacaggagaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102581800 218 - 106955855 GTTTTTAAAACAACTTTCTGggctgggcacggtggctcacgcctgtaatcccagcgcttggggaggccgaggcaggcggatcacctgaggtcaagcattcaagaccaacctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattggccgggtgtgatgagaaacccctgtaatcccaactactcgggaccctcatacaggagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59873867 218 + 64156825 GTTTTTAAAACAACTTTCTGggctgggcgcagtggctcacgcctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatac-aaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i rheMac3.chr19 C 0 I 14 s papAnu2.chr19 47013722 219 + 51301725 gtttttaaaacaactttctgggctgggcgcagtggctcacacctgtaatcccagctctttgggaggctgaggtgggtggatcacttgaggtcaggagctcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaaattagctgggcgtggtggcaggcgcctgtaatcccagctactcggaaggctgagacaggagaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726087 218 + 50890351 GTTTTTAAAATAACTTTCTGggctgggcacagtggctcccgcctgtaattccagctctttgggaggctgaggtgggtggatcacttgcagtcaggagcttgagaccagcctggccaacatggtgaaaccccatcactactaaaaatac-gaaaaaattagctgggcgtggtggcagacgcctgtaatcccagctactcggaaggctgagacaggagaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=62407.000000 s hg38.chr19_GL949753v2_alt 13770 85 + 796479 catttgaacctgcggggagaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccatc s panTro4.chr19 58950605 85 + 63644993 catttgaacctgcagggagaagttgcagcgagctgagatcacgccactgcactctggagcctgggcgacagagcaagactccatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582018 85 - 106955855 catttgatcctttttggtgtggtgactgcgagctgacatcgcaacactgcattccggtgccggggtgacagagcatgactccttc i nomLeu3.chr10 C 0 I 3 s papAnu2.chr19 47013941 85 + 51301725 cacttgaacctgccgggggaggttgcagcgagctgagatcacgccactgcactctggcgcctgggcgacagagcaagactccata i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 46726305 85 + 50890351 catttgaacctgccgggggaggttgcagcgagctgagatcacgccaccgcactctggcgcctgggcgacagagcaagactccatc i chlSab2.chr6 C 0 I 12 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874085 14 + 64156825 I a score=48488.000000 s hg38.chr19_GL949753v2_alt 13855 43 + 796479 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata s panTro4.chr19 58950690 40 + 63644993 ---aaaaaaaaaCCtttctatagatacataata-tttatgcata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102582106 44 - 106955855 aaaaaaataaaTCCTTTGTatggatacaaaatattttatgcata i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59874099 43 + 64156825 aaaaaaaaaaaatctttctatagatacataata-tttatgcata i rheMac3.chr19 I 14 C 0 s papAnu2.chr19 47014040 43 + 51301725 aaaaaaaaaaaaactttctatagatacataata-tttatgcata i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 46726402 43 + 50890351 aaaaaaaaaaaaaCtttctatagatacataata-tttatgcata i chlSab2.chr6 I 12 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e ponAbe2.chr19 55816955 40 + 60714840 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=155676.000000 s hg38.chr19_GL949753v2_alt 13898 100 + 796479 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt s panTro4.chr19 58950730 100 + 63644993 tttatgacatacatgtgatagtttg------------------------------------------atacatgcacagaatgtataatactcaaattagggtatttaggatattc-accacctcaaacatttatcttt-tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55816995 100 + 60714840 TTTATGACAtacatgtgatagtttg------------------------------------------atacatgcacagaatttataatactcaaatcagggtatttaggatattc-accacctcaaacatttatcttt-tttt i ponAbe2.chr19 I 40 C 0 s nomLeu3.chr10 102582150 96 - 106955855 tttatgacatacatgtgatag-ttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattc-acca-ctcaaacatttatcttt-tt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874142 144 + 64156825 tttatgacatacatgtgacagtttgatacatgtgacagtttgatacagtttgatacatgacagttttatacatgcacagaatgtataatactcaaatcaggatatttaggatattctgctacctcaaacatttatctttctttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014083 102 + 51301725 tttatgACATACATGTGACAGTTTG------------------------------------------ATACATGCACAGAATGTATAATactcaaatcagggtatttaggatattctgctacctcaaacatttatctttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726445 99 + 50890351 tttatgacatacatgtaacagtttg------------------------------------------atacatgcacagaatgtataatactcaaatcagggtatttaggatattctgctacctcaaacatttatct---tttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e calJac3.chr22 45296027 2053 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=92922.000000 s hg38.chr19_GL949753v2_alt 13998 55 + 796479 ttatcttttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt s panTro4.chr19 58950830 55 + 63644993 ttttcgtttcgagacagagtctctctct-gtcgcccaggctggagtacagtggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817095 54 + 60714840 tttt-ttttcgaaacaaagtctctctct-gtcgcccaggctggagtacaggggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582246 50 - 106955855 -----ctttcgagacagagtctctctct-gtcacccaggctggagtacagtggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874286 51 + 64156825 ttttcctttcgagacagag----tctct-gttgcccaggttggaatgcagtggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014185 51 + 51301725 ttttcctttcgagacagag----tctct-gttgcccaggttggagtgcagtggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46726544 51 + 50890351 ttttccttttgagacagag----tctct-gttgcacaggttggagtgcagtggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298080 56 + 49145316 ttgttgttctgagatggagtttcgctctcgtttcccaggctggagtgcagtggcac i calJac3.chr22 I 2053 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=702425.000000 s hg38.chr19_GL949753v2_alt 14053 415 + 796479 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcgccaccacacccagctaatttttgtatttttagtggagatggggtttcaccttgttggccaggctggtcttgaactcctgacctcaggtgatccacccatcttggcctctcaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact s panTro4.chr19 58950885 415 + 63644993 gatcttggctcactgcaacctctgcctcccgagttcaagcaattcttctgcctcagcctcccaagtggctgggattacaggtgtgcaccaccacacccagctaatttttgtatttttagtggagatggggtttcaccatgttggccaggctgctcttgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcgtttgtgttgggaatgtttcaaatcttctcttctagctattttgaaatatacaatatattgctgttaactatagtcacccttctgtgctattgaacacttgaacttattccttctatccaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817149 410 + 60714840 gatcttggctcactgcaacctccgcctcccaggttcaagcgattcttctgcctcagcctcccaagtggctgggattacaggcatgcacaaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccatcttggcctcccaaagtgtt-ggattacaggagtgagccactgcacctggcccatttatcgtttgtgtttggaacgtttcaaatcttctcttctagctattttgaaatatacaatatattgttgttaactatagttacccttctgtgctattgaacacttgaacttattccttttat----ctgtgtttgtgcccactaactatcccaccccttctagcctttgataact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582296 415 - 106955855 gatcttggctcactgtaacctccgcttcccgggttcaagcaattcttctgccccagcctcccaagtggctgggattacaggcgtgcaccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggccgggctggtcttgaacgcctgacctcaggtgatccacccatcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcgttgatcatttgtgttgggaatgtttcaaatcttctcttctagctgttttgaaatatacaatatattgttattaactatagtcacccttctgtgctattgaacatttgaacttattccttctatctaactgtgtttgtgcccattaactatcccaccccttctagcctttgataact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59874337 415 + 64156825 gattttggctcactgcaacctctacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcaccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttaaactcctgacctcaggtgatccacctgtcttggcctcccaaagtgttgggattacaggagtgagccactgcacctggctcatttatcatttgtgttgggaaagtttcaaatcttctcttctagctattttgaaatatacaatgtactgttgttaactatagtcacccttctgtgctgttgaacacttgaacttgttccttctgtttaactgtgtttgtgcccgttaactaaccCACCCCTTCTAGCCTGTGATAACT i rheMac3.chr19 C 0 I 334 s chlSab2.chr6 46726595 415 + 50890351 gattttggctcactgcaacctccacctcctgggttcaagtgattcttctgcctcagtctcccaagtagctgggattacaggcatgcgccaccacacccaattaatttttgtatttttagtagagacggggtttcaccatgttggccaggttggtcttaaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgttgagattacaggagtgagccactgcacccggctcatttatcatttgtgttgggaaagtttcaaatcatctcttctagctattttgaaatatacaatgtactgttgttaactatggtcacccttctgtgctgttgaacacttgaacttgttccttctgtttcactgtgtttgtgcccattaactaacccaccccttctagcctgtgataact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298136 408 + 49145316 catcttggctcacggcaacctccgcctcccaggatcaagcaattctcgtgcctcagcctcccgagtagctgggattacaggcgtgcgccaccacacccggctaa-ttttgtatttttagtagagatgaggtttctccatgttggccaggctggtctcaaaca-ctgacctcaggtgatccacccgcctcagcctcccaaagtgttgggagtacaggagtgagccactgcgcccggcTcgtttatcatctgtgttggggatgtttcaaatctcctcctctagctgttgtgaactgtacaatacattgttataaactgtagtcacccttctgtgctgcccaacactt-cacttattcttcctct----ccgcgtttgtgcccattaactaacccgccccttctagcctctgataact i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=471.000000 s hg38.chr19_GL949753v2_alt 14468 2 + 796479 ga s panTro4.chr19 58951300 2 + 63644993 ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817559 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45298544 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e nomLeu3.chr10 102582711 0 - 106955855 C e chlSab2.chr6 46727010 0 + 50890351 C e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59874752 334 + 64156825 I a score=499590.000000 s hg38.chr19_GL949753v2_alt 14470 321 + 796479 ctctctctttaccttcatgagatctacttttttagctcctac--atgagtgagaacatgAAGttgtaaataaagttttattctaacaccgccacaccta---cttgtttacatatcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCGttttttgtttttttttttttttttttttgagatggagtctcactccattgcccaggctggaattcaatggcgc s panTro4.chr19 58951302 317 + 63644993 ctctctctttaccttcatgagatctacttttttagctcctac--atgagcgagaacatgAGGttgtaaataaagttttattctaacactgccacaccta---cttgtttacatatcagcgatggttgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCAGCTCTGGGCgttt----tgttttgttttgttttgttttgagatggagtctcactccattgcccaggctggaattcaatggcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817561 315 + 60714840 --ctctctttacctccatgagagccatttttttagctcccac--gtgagtgagaacatgAGGttgtaaataaagttttattcgaacaccaccacaccta---cttatttacatatcagccatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacttgttactctctggccctttTGTTTTCTGCCCTCTGGTCTAGGAGTTTGCGGCTCTGGGCGttt----ttttttgtttttttttcttttgagatggagtctcactccgttgcccaggctggaatgcaatggcgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102582711 314 - 106955855 --ctctctttaccttcatgagatctacttttttagctcccac--atgagtgagaacatgaggttgtaaataaagttttattcgaacaccgccactccta---cttgtttacatgtcagcgatggctgctttcatggtacaacagcagagtggggtagtctcagcagagatcctacagcccacaaagctggacgtgttactctctggtcctttTGTTTTCTGCCCTCTGGTCCAGGAGTTTGCAGCTCTGGGCGttt----tttgtt-ttgtttttttttttgagatggagtctcactccgttgcccaggctggagtgcaatggcgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875086 304 + 64156825 CTCTctctttaccatcataagagccacttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaacgatggctgctttcatggtacaacagcagaatggggtagtctcagcagagatcctacagcccacaaagctgggaatgttactctctggtcctttTATTTTCTGTCCTCTGGTCTAGGAGTTTGCAGGTCTGGGCGTGt----------------ttgttttttgagatgga-tctcactctgttgcccaggttggagtgcaatggtgt i rheMac3.chr19 I 334 C 0 s chlSab2.chr6 46727010 304 + 50890351 ctctctctttaccttcataagagccagttttttagctcccac--atgaatgagaacatgAGGttgtaaataaagttttattcgaacaccgccacatcta---cttgtttacatatcaaagatggctgctttcatggtactacagcagaatggggtagtctcagcagagatcctacagcccagaaagctggaaatgttactctctagtcctttTGTTTTCTGCTCTCTGGTCTAGGAGTTTGCAGGTCTGGGGGTGt----------------ttgttttttgagatgaa-tctcactctgttgcccaggttggagtgcaatggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298546 315 + 49145316 ctctctctttaccttcacgaggtccacctttttagctcccacatatgagtgagaacatgAGGttgtaaataaagttttattcaaacaccaccacacctacttcttgtttacatatcagcaatggctgctttcatggtacaa---cagaatggggtaacctcagcagagatcctactacccacaaagctggaaatgttactctctgctcctttTGTTTTCTGTTCTCTGGTCTAGGAATTTGCAGGTCTGGGCTTtt--------tgtttgtttgtttgtttgaggtggaatctcaccctgttgaccaggctggggtgcaatggtgc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e papAnu2.chr19 47014236 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=941058.000000 s hg38.chr19_GL949753v2_alt 14791 417 + 796479 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagcggggattacaggcgcctgccaccacgtccaactaattttttatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAGTAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGACGAG s panTro4.chr19 58951619 417 + 63644993 catctcagctcactgcaatctctgcctcctgggttcaagcgattcttct-gcctcagtctcccaagtagctgggattacaggcacccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCGTTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55817876 417 + 60714840 catcccggcccactgcaatctctgcttcctaggttcaagcgattctctt-gcctcagtctctcaagtagctgggattacaggcgcccgccaccacgtccaactaattttgtatttttagtagagatgggatttcaccatgttggtcgggctggtcttgaactctgacatcagatgatccagccgcctcagcctcccaaagtgctgggatgacaggcgtgag----------------ccCGGCCATTTTCTTTTTTGCTTGTTGTGCTTCCTGGAGATGCTCAATAATTCTTACATTCTTTCCTGGATAGCTGGTCAATCATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATAGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583025 411 - 106955855 catctcggctcactgc-atctctgcctcctggg-tcaagcgattctcctggcttcagtctcccagtaagctgggattacaggcgcccaccaccacgtccaactaa-ttagta-ttttagtagagatgggatttcaccatgttggtcaggctggtcttgaactctgacctcagatgatccacccgccccggcctcccaaagtgctgggatgacaggtgtgag----------------ccCGGCCATTTTCTTTTTTGC---TTGTGCTTTCTGGAGATGTTCAATAATTCTTACATTTTTTCCTGGATAGCTGATCAATCATTATTTCTTATTTCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGATGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875390 417 + 64156825 catctcagctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccatcatgtcccgctaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------ccTGGCCATTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGTATGGTGGGGTCCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014236 413 + 51301725 catctcggctcactgcaacctctgcctcctgggttcaagcgattctctt-gcctcagcctcccaagtagctgggattacaggcgcccaccaccatgtcccactaattttgtatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcatgag----------------cctggccgTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATAATTCTTACATTCTTTGCTGGATAGCtgatcaataattatttattatttccttgaatTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTATGGTGGGGTTCTTGGGCATGAATAATCCATAAa----tcagatttctttttaagatgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727314 417 + 50890351 catctcagctcactgtaacctctgcctcctgggttcaagcaattctctt-gcctcagcctcccaagtagctgggattacgggcgcccaccaccatgtcccgctaattttatatttttagtagagatgggatttcaccatgttggtcaggctggtcatgaactctgacctcagatgatccacccgcctcggcctcccaaagtgccgggatgacaggcctgag----------------ccTGGCCGTTTTCTTTTTCGCTTGTTGTGCTTCCAGGAGATGCTCCATGATTCTTACATTCTTTGCTGGATAGCTGATCAATAATTATTTATTATTTCCTTGAATTGTTCTAGGAGGAAATGCGGGGTAGAAAGAGGATGGTGGGGTTCTTGGGCATGAATAATCCATAAATAAGTCAGATTTCTTTTTAAGATGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45298861 428 + 49145316 catctcggctcactgcaacctctgcctcctgggttcaagcgattttcct-gcctcaccctcccgagtaagtgggattgcaggcgcccatcaccacacccagctaattttgtatttttaatagagatgggatttcaccatgttggccaggctggtcttgaactctgacctcagccgagccacctgcctcagcctcctgaagtgct-ggattacaggcgtgcgccaccaagcccggccCCCTGGCCATTTTCTCTTTTGTTTGTTGTGCTTCCTGGAGAGGTTCAATAATACTTGCATTCTCTGCTGGATAGCTGATCAATAATAA----TTATTCCCTTGAATTGTTCTAGGAGGAAATGTGGGGTAGAAAGAGTGTGGTGGGGTTCTGGGGCATGAATACTCCGTAAATAAGCCAGATTTCTTTTTAAGATGAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19460281 3674 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=949861.000000 s hg38.chr19_GL949753v2_alt 15208 376 + 796479 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGAA-ACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaacccaggtcctcggtcacaccagatgcattt s panTro4.chr19 58952036 377 + 63644993 AAACTTAATTTTATTGATATGGACGAAGAGCAAGGGACACACAGT-ATCTGCATCTCCAGATTTCCGATAACCTTGGCCAGCACGACCCCC--------CCTCCTTTAGTGGCCAGGGCTGTCTTCTTGCTACACTTTCAGTGCCGCATATTCACGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaagttaattacaattaaatttaatttaaaatccaggtcctcagtcacaccagatgcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818293 380 + 60714840 AAACTTAATTTTATTGATACGGATGAAGAGCGAGGGACACAGAGTCATCTGCATCTCCACGTTTCCGATAACCTTGGCCAGCACAATCCCC--------CCTCCTTTAGTGGCCGGGACTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCACTGGTGCTTAGCTCAGCATAGGTCACTCCTTTGGGGG--TCTGCTGTCTTTGGAGAAAATAGATGAATA----------TTTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583436 378 - 106955855 AAACTTAATTTTATTGATACGGATGAAGAGCAAGGGACACAGAGTCATCTGCATCTCCATGTTTCCGATAGCCTTGGCCAGCACGATCCCC--------CATCCTTTAGTGGCCGGGGCTGTCTTCTTGCTACACTTTCAGTGCTGCATATTCATGAGATCCTGGGGGTTCCCGGGTGGTGT-CGGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCT-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-tgttcaatatggcagccactagccacacatggctattgacatttaaattaattacaattaaatttaatttaaaatccaggtcctcggtcacaccagatgcattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59875807 373 + 64156825 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagctacacgtggctattgacatttaaattaattac-----aattaaattcaaactccaggtcctcggtcacaccacatgcattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47014649 378 + 51301725 aAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCTGCATCTCCACGTTTCTGATAACCTTGGCCAGCATGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACTTTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAGCTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCCGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGtcaatatggcagccactagctacatgtggctattgacatttaaattaattacaattaaattaaattaaaaatccaggTCCTTGGTCACACcacatgcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46727731 378 + 50890351 AAACTTAATTTTATTGATACGGATGAGGAGCAAGGGACACAGAGTCATCCGCATCTCCACGTTTCTGATAACCTTGGCCAGCACGATCCCC--------CCTCCTTTAGTGGCCCGGGCTGTCTTCTTGCTACACATTCACTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CAGAAACTGCCTCAGACAGGGCATTGATGTTTAGCTCAGCATACGTCACTCC-TTGGGGG--TCTGCCGTCTTTGGAGAAAATAGATGAATA-----------TTAGAACTGAG-TGGTcaatatggcagccactagccacacgtggctattgacatttaaattaattacaattaaattaaattcaaaatccaggtccttggtcacaccacatacatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299289 382 + 49145316 AAACTTAATTTTATTGATACGAATGAGAAGCAAGGGACAC--GGTCATCCACATCTCCACATTTTCAATGACCTCAGCCGGCACAATACCC--------CCTCCTTCGGTGGCCTGTGTTGTCTTGTTGCTACACTTTCAGTGCCACATATTCGTGAGATCCTGGGGGCTCCAGGGTAGTGT-CAGCAGCTGCCTCAGACAGGGCGTGGGTGCTTAGCTCAGCAGAGGTCACTCC-TTGGGGG--TCTGCGGTCTTTGGGGAAAACACACGAACACAGACACGCATTGAACACTGAG-TGGTcagtatggcaaccactagccacccatggctcttgatgtttaaattaattac-----agttaaatttaaaatccaggtcctcggtcacgcgagatgcattt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19463955 381 - 122678785 aaacttaattttattactatggattATGAACTAAGGACAC--AGTGACCTG-GTTGCCATGTGTCCAGTCATCC---CCAGCATGTTAACCCATGTTCTCCTTCTCCAGGGGTCCG-GCTG--TTCTTCCTTCACCTGCCGCACTGCACATTCACAAGATCCTGGGGACTCCTCGGTGGGGCACAGAAGCTGCCTTAGGTGGTGCCTTGGGGTTTAGATCAGCATGGCTCACTCC-CTGGGGGGTCTTTCAGTCTTTGAGAAAGAGAGACAGGAT-----------TTAGAGCTTAgctgtccaatatggtacctacaacccacatatggctatttacatgtaagcaaattaaaattacatttaatttaaagctcaggtcctcagtcacagcaggtacagtt i canFam3.chr1 I 3674 I 1974 e macFas5.chr19 54882420 20327 + 59248254 M a score=937443.000000 s hg38.chr19_GL949753v2_alt 15584 478 + 796479 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGCCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAttttttttaaatttttatttatttatttattttgggacagagtctggctc-tgtcgcccaggctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccactaccacgcccagctaattttttgtatctttagtagagatggggtttcaccatgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--gcccggccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGCGTGATAAACAG--TATACATTTCT s panTro4.chr19 58952413 478 + 63644993 cTTTTTCTTTTCTGTTGTTATGACCCTTTATGCCTGTGACATCAATGGATCTGCATAAGCCTTTTTTCATTTTTTAAAAAtttttatttatttatttattttgagacagagtctggctc-tgtcgcccagcctggagtgcggtggcgtgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggcgcccaccaccacgcccagctaattttttgtatctttagtagagatggggtttcactgtgttaaccaggatggtctcgatctcctgacctc--atgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--gcccagccC-----------------------------------------ATGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACATGGGTGATAAACAG--TATACATTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55818673 479 + 60714840 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTGCGTAAGCCTTTTTTCAtttttt-aaaatttttatttatttgtttattttgagacagagtctcgctc-tgttgcccaggctagggtgcagtggcacgatctcagctcactgcaacctccgcctcccgggttcaagccattctcctggctcagcctcctgagtagctgggattacaggtgcccgccaccacgcccagctaattttttgtatctttagtagagacggggtttcacagtgttaaccaggatggtctcgatttcctgacctt--gtgatccgcccgccttggcctcccaaagtgctgggattacaggcatgagccaccgc--gcccagccC-----------------------------------------GTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCATTAGGGGAGTTTCATGACTTGTCTAAGACCACACAGGTGATAAACAAATAGAACATTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102583814 475 - 106955855 cTTTTTCTTTTCTGTTTTTATAACCCTTTATGTCTGTGACATCAATGGATCTCCGTAAGCCTTTTCTCAtttttt-taaatttttatttatgtatttattttgagacagagtctcactc-tgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccgggttcacaccattctcctggctcagcctcctgagtagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagacagggtttcactgtgttaaccaggatggtctcaatctcctgacctc--gtgatccgcccgcctcggcctcccaaagtgtggggattacaggcgtgagccaccgc--gcccagccC-----------------------------------------GTGCATACGCCTTTTAAATGGAGATTTTGGTTCTCATTAGGGGAGTTTCGTGACTTGTCTAAGACCACACGGGTGATAAAC----TATACATTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876180 464 + 64156825 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATTGGCGTAAGACTTTTATttttttatt----tttatttttattttttta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaat-ccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------GGTGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTATCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015027 469 + 51301725 ctttttcttttctgtttttatagccCTTTATGTGTGTGACATCAATGGATCGGcgtaagacttttatttttttatttttatttatttttatttattta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggtttaagtcaTTTTCCTGGCTCGGaatcccaagcagctgggattacaggcgcccgccaccacgcccagctaattttttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgc--acccagccc----------------------------------------cgtGCATATGCCTTTTAAATAGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACAGGTGATAAATAG--TAGACGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728109 469 + 50890351 cTTTTTCTTTTCTGTTTTTATAGCCCTTTATGTGTGTGACATCAATGGATCTGCGTAAGACTTTTAtttttttatttttatttttatttatttatcta-tttgagacagaatctcgctc-tgttgcccaggctggagtgcagtgccgtgatctcggctcactgtaacctccgcctcccgggttcaagtcattttcctggctcggaatcccaagtagctgggattacgggcgcccgccaccacgcccagctaattgtttgtatctttagtagagatgaggtttcactgtgttagccagggtggtctcgatctcctgacctt--gtgatctgcctgcctcggcctcccaaaatgctgggattacaggcgtgagccaccgc--acccggccC----------------------------------------TGTGCATATGCCTTTTAAATCGAGATTTTGGTTCCCCTTTGGGGAG---------TTGTCTAAGACCACACGGGTGATAAATAG--TAGACGTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45299671 463 + 49145316 cTTTTTCTTTTCTGTtttta-------------------------------------------ttatttatttat-----------tttatttatt---tttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacccgcctat---cccggctaatta-ctgtatttttagtagagacgaggcttcaccatgttggccaggctggtcttgaacacctgacctctggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgtgcccggccTCTTTCCTGTTTTTAAACCCTTTATTTGTGACATCAATGGATCTGCATAAGCCTTTTAAATGGAGATTTTGGTTCCCGTTATGAGAGTTTTGTGACTCGTCTACGATCACATGGGTGATAAACAG--TGGACATTTCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19464336 1974 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=191023.000000 s hg38.chr19_GL949753v2_alt 16062 83 + 796479 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC s panTro4.chr19 58952891 83 + 63644993 GTATGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GTAACTCCTAAGCGGTAGGACTCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55819152 87 + 60714840 GTACGGTCTTAACCAGGAGGCACACACGACCAATGGGCCGATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i ponAbe2.chr19 C 0 M 2486 s nomLeu3.chr10 102584289 83 - 106955855 GTACGGGCTTAACCAGGAGGCACACACGACCA----GCCCATTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------AGGACTCCTAAGCGGGAGGACTCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876644 83 + 64156825 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015496 83 + 51301725 GTATGGGCTTAACCAGGAGGCAGACACGACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGATTCCTAAGCGGGAGGACTCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728578 83 + 50890351 GTATGGGCTTAACCAGGAGGCAGACACAACCA----GCCCGTTGTGGTGAGGGAG---------------------------------------------------CTCTTGT--------GGGACTCCTAAGCGGGAGGACTCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300134 142 + 49145316 GTGTGGGCTTAACCAGCAGACAGACACTACCA----GCCCAGCGTGGTAAGGGAGGGACTCATAGgtagagacaggtttcaccacgttcgtcaggctggtctcgaactcctgtcatggtgaAGGACTCCCAAGCTGGAGGACTCAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466310 69 - 122678785 GTATGGGCTGAACTGGGAGGCAAACAAGGTCA----GCATATGGTGATAAGTGAC-----------------------------------------------------CTTGT--------G------------GGGAGAACTCAT i canFam3.chr1 I 1974 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=153677.000000 s hg38.chr19_GL949753v2_alt 16145 81 + 796479 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGA s panTro4.chr19 58952974 81 + 63644993 CGAGAGAGATACCC-TTTCCATATTGGATAAATCTGCCTCTGAGTGAGAAAG---GAAAAAAAAAAATCAGTTCTCAG-CTGCAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584372 85 - 106955855 CGAGAGAGATACCCTTTTCCATATTGGATAAATCTGCCTCTGAGTGAGaaagaaaaaaaaaaaaaaaTCAGTTCTCAG-CTGCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59876727 82 + 64156825 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015579 82 + 51301725 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTctgagtgagagag--aaaaaaaagaaaatcagttttcaG-CTGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728661 82 + 50890351 CGAGACAGATACCC-TTTCCATCCTGGATAAATCTGCCTCTGAGTGAGAGAG--AAAAAAAAGAAAATCAGTTTTCAG-CTGTAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45300276 81 + 49145316 CGAGACATATACCC-TTTCCATCTTGAATAAATCTGTATCTGAGTGAGAGAG---AGAGAAAAAAAATCAGGTCTCAG-CTGCAGA i calJac3.chr22 C 0 I 1135 s canFam3.chr1 19466379 76 - 122678785 -GAGACACGTATCC-TTTCCAGGTTGGATAAATCTGCATGTGAGTAAAAGGG--------GGAAAAATCAGCTCTCAGATTGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=175542.000000 s hg38.chr19_GL949753v2_alt 16226 92 + 796479 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG s panTro4.chr19 58953055 92 + 63644993 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CGTCCCCTGTCCCTTACCGGCAGCCTCCTGCTCCGGAAGTTTGGAATGGCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102584457 92 - 106955855 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTAAA----CTTCCCCGGTCCCTTACCGGCAGCCTCCTGCTCTGGAAGTTTGGAATGGCTGG i nomLeu3.chr10 C 0 M 550 s rheMac3.chr19 59876809 92 + 64156825 AGTCAGAACTT-AGTCTTTCTATCCGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCACCTGCTCCGAAAGTTTGGAATGGCTGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015661 93 + 51301725 AGTCAGAACTTAAGTCTTTCTATACGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728743 92 + 50890351 AGTCAGAACTT-AGTCTTTCTATCTGGTGATTCCCTTACA----TTTTCCCTGTCCCTTACCAGCAGCCTCCTGCTCCGAAAGTTTGGAATGGCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301492 86 + 49145316 agccAGAACTT-AGCCTTTCTGTCTGGTTATTCCCT----------TCCCCTATCCCTTACCAGCAGCCTCTCGTTCTGGAAGTTTGGAATGACTGG i calJac3.chr22 I 1135 C 0 s canFam3.chr1 19466455 95 - 122678785 AGTGAG-ACTT-ATTCTTTCTATCCCGTTGTTCCCCTGTGGTTTCTTCCCTTACCACTCACCTGCAGCCTCCTCCTTGGGAAATTTGGAATGTCTGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=342465.000000 s hg38.chr19_GL949753v2_alt 16318 294 + 796479 TTCTGAAAGAGAGAGACACACGTG--AAAGGATGGGATGTGAAGATTTCGGGGAGAGGGTGAGGGCAATGGAGGGGAGAGGAAGG--------------------GAGAAGAAGGGAGAGGAGGAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAA-TAAGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCCTCA---GATGATGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC s panTro4.chr19 58953147 315 + 63644993 TTCTGAAAGAGAGAGACACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcaatggaggggagaggaagggagaagaggggagaggaagagagaagaggggagaggaggAAGGTCACAGAATGGGCTGGGGTGGGGGCTCAGGGTGCCAATCCCGGATGTGCCAATGGGTTCCCTTGAGAATGACATGGGAACTACGTGGAGCATGAGCTATGCCAAG--CATCTACCTCTTGGTGGATTCTTCA---GATGATGAACCTACAAG------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACGGAG-AAAATCCTTCACTCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59876901 285 + 64156825 TTCTGAGAGAGAGAGAGACACATG--AAAGGATGGGATGTGAAGATTTCGGggagagggtgagggcagtggaggggagaggaggg------------------------------aagtggagggAGGTCACAGAATGGGCTGGGGTGGGAGCTCAGGGTACCAATCCCGAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGTGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47015754 287 + 51301725 ttctgagagagagagagacacgtGAAAAAGGATGGGATATGAAGATTTCggggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggtcacagaatgggctggggtgggggctcagggTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGACGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46728835 285 + 50890351 TTCTGAGAGAGAGAGAGACACGTG--AAAGGATGGGATATGAAGATTTCGGggagagggtgagggcaatggaggggagaggaggg------------------------------gagtggagggaggTCACAGAATGGGCTGGGGTCGGGGCTCAGAGTACCAATCCCAAATGTGCCAATGGGTTCCCTGGAGAATGACATGGGAATTAAGGGGAGCATGAGCTATGCCAAG--CATCTACCTTTTGGTGGATTCTTCA---GGCGAAGAACCTACAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATTTACCTACCGAG-AAAATCCTTCACTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301578 269 + 49145316 TTCT--AAGAGAGAGAAACACATG--AAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGT--------------------------------------------CACAGGCCGGGCAGGAGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGATTCCCTGGAGAATGACATGGGAATTGGGTGGAGCATACGCTATGCCCAG--CGTGTACCTCTTGGAGGATTCTTCA---GGCGAGGAACCTATAAA------------------------------------------------AAATGCA-----------------------------------------------------GGAGGAATGTACCTACTGAG-AAAACGCTTCGCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466550 329 - 122678785 TTCT--AAGAGACAGAAACACATT--AAAGCATGGGATCTAAAGACT--GGGGAGGATGGCAGGGCTTTGGAGACTAGAGGCATG------------------------------GG----------------------------------------------AATCATAGATGTGCAATCAGGGTCTCTGAGGAAGG-------------GAGAGGCACGAGATACATCAAGTATATCTACCTTTTGGTGGCTTCTTCATGTGATGATGAACCTACAAAACAAAACAAAAAGGGAGGAATTTATATTtaaaaaattttttttaatttaaattcaatttcctgacataaagtataatacccagtgctcatctcatcatgtgccctcAGGGAGAAATTTATCTAATAAGAAAAATCTTTCATTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e nomLeu3.chr10 102584549 550 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=36324.000000 s hg38.chr19_GL949753v2_alt 16612 17 + 796479 CCCTCTCTCCCTTTGCG s panTro4.chr19 58953462 17 + 63644993 CCCTCTCTCCCTTTGCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585099 17 - 106955855 CCCTCTCTCCCTTTGCG i nomLeu3.chr10 M 550 C 0 s rheMac3.chr19 59877186 17 + 64156825 CCCTCCCTCCCTTTGCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016041 17 + 51301725 ccctctctccctttgcG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729120 17 + 50890351 CCCTCTCTCCCTTTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301847 17 + 49145316 CCCTCTCTCCCTTTGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19466879 17 - 122678785 ATCCCCCTTCCCCAGCG i canFam3.chr1 C 0 I 181 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=754002.000000 s hg38.chr19_GL949753v2_alt 16629 367 + 796479 TTCTCTGAGCTCACTGTGCTGGCTGCATCTGTAGATgatgaagactgagaggaagaggagaaggatggagatgcagctgaagatggcgacaaagatggTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccacctcggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac s panTro4.chr19 58953479 367 + 63644993 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCATGTCAGGGAATCAGCCTGGCTCCTGAAATCCACTGATAGGGGCGAGCCGAAAA--GCTAAGAGAAGCCagacagatggcctggcttccaagcc--tggatctcccaccttggagctggaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585116 367 - 106955855 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGGAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAAATGGTTCTGGTGTCTGGAGAGGGAAGAGCAGGTCAGAGAATCAGCCTGGCTCCTGAAATCCACCGATGGgggtgagctgaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctggaatttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgaggatagcagcagtagctactttattggatgg-------------tgggtcagtacctatagaaagggctggaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877203 367 + 64156825 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGACTGAGAGGAAGAGAAGAAGGATGGAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGagcagaaaa--gctaagaggagccagacagacggcccggcttccaagcc--tggatctcccaccttggagctgaaacttcctattgctttggggaatttccttaatcttctccaagcttctgtttccccatctgtaaagtgagtgtagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47016058 366 + 51301725 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAGATGATGAAGactgagaggaagagaagaaggatggAGATGCAGCTGAAGATGGCGACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGTAGGTCAGGGAATCAGCCTGGCTCCTGAAATCCACCGATAGGGGTGAGCAGAAAA--GCTAAGAGGAGCCAGACAGACGGCCCGGCTTCCAAGCC--TGGATCTCCCACCTT-GAGCTGAAACTTCCTATTGCTTTGGGGAATTTCCTTAATCTTCTCCAAgcttctgtttccccatctgtaaagtgaggacaGCAGCAGTACCTATTTTGTTGGCTGG-------------TGGGTCAGTACCTATAGAGAGGGCTGGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729137 367 + 50890351 TTCTCTGAGCTCACCGTGCTGGCTGCATCTGTAgatgatgaagactgagaggaagagaagaaggatggagatgcagctgaagatgGCAACAAAGATGGTTCTGGTGTCTGGAGGGGGAAGAGCAGGTCAGGAAATCAGCCTGGCTCCTGAAATCCACCGATAGgggtaagtagaaaa--gctaagaggagccagacagacggcctggcttccaagcc--tggatctcccacctcggagctgaaacttcctattgctttggggaatttccttaatcttctctaagcttctgtttccccatcggtaaagtgaggacagcagcagtacctattttgttggctgg-------------tgggtcagtacctatagagagggctggaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301864 365 + 49145316 CTCTCTGAGCTCACCGTTCTGGCTGCATCTGTAGATGACGATGACTAAGAGGAAGAGGAGAAGGATGGAGACACAGCTGAAGATGCTGACAAAGATGGCTCTGGTGTCTAGAGA-GGAAGAGCAGGTCAGGGAATCAGCCTGGCTCCTGAAATGCGCTGA-GAGGGTGagcagaaaa--gctaagaggagccagccagacagcctggcttccaagcc--tggatctcccacctcggatctggaacttcctattgctttggggaattaccttaatcttctccaagcttctgtttcctcgtctgtaaagtgagggtagcagcagtagctactgtagtggatgg-------------tgggtcagtacccatagagaaggctggaac i calJac3.chr22 C 0 T 1028 s canFam3.chr1 19467077 365 - 122678785 TTCCCCAAACTCACCATGCTGGGTGCATATGTTGATGAAGAAGATGGAGAGGAAGAGGAGCAAAATGGAAAGGCAGGTGAACGTAGCAGCAAAGATGAATCTGGTGGCTAGTGGGAGAGGAACAGGTAGTAGAATCAGTTTGGTTCCTGAGACACCCTGATCAAGCTTAGCAGACAGGTGCCAAg-------aaccagataacctggtttccaaaactttgcagctgccacttctgagctgtaacttccaattactgc-gggaatttccttca-cctccctgaccttttgtttccctgtt--caaagtgaggacaaaaacagtagctgcTGGACTGGATGGAGCTGGGGTTAACTGGGTGGGTCCTGGCAGAGAGG-------- i canFam3.chr1 I 181 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M a score=108538.000000 s hg38.chr19_GL949753v2_alt 16996 84 + 796479 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag s panTro4.chr19 58953846 84 + 63644993 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGAtattgatcatttattgtgagccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585483 84 - 106955855 agtgcttggcgcataggaaattccaaaaatTCCCAGGGAATGTTTGGTGCATAGCAATGATATTGATCATTTATTGTGAGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59877570 75 + 64156825 actgcttggcgcatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i rheMac3.chr19 C 0 I 1256 s papAnu2.chr19 47016424 74 + 51301725 ACTGCTTGGCGCATAGG---------AAATTCCCAGGGAATGTTTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46729504 75 + 50890351 actgcttggcacatagg---------aaattcccagggaatgttTGGTGCATAGCAATGAAATTGATCATTTATTGTGAGCCAG i chlSab2.chr6 C 0 I 323 s canFam3.chr1 19467442 71 - 122678785 ---GCCTCACACAAGGG---------AAATCCCCAATAAGTGTTTTAGCCATAGTAATAATTCCTATTATttattgtgagctg- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=7377.000000 s hg38.chr19_GL949753v2_alt 17080 26 + 796479 ctctgttccaggtgctccatatatat s panTro4.chr19 58953930 26 + 63644993 ctctgttccaggtgctccatatatat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585567 21 - 106955855 CTCTGTTCCAGTTGCTCCata----- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016498 10 + 51301725 -----------GTGCTttaca----- i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19467513 26 - 122678785 ccctgtgctaggcgcttcacacatgt i canFam3.chr1 C 0 I 817 e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=83016.000000 s hg38.chr19_GL949753v2_alt 17106 238 + 796479 ATATACGTGTGTGTGTGTGtatatatatatataaatgtatatatatgtgtgtgtatatataaatgtgtatatatatatatatatatatatatatatatacatatatatatatatataCACACttttttt-tttttgagatggagtcgtgttctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcctgagta s panTro4.chr19 58953956 221 + 63644993 ata----tgtatgtgtgtatatatatatatataaatgtatatatatgtgcgaatatatataaatgtgtgtatatgtacatatatat--------------atatatatatatataCACACACtttttttctttttgagatggagtcgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccctggttcaaacaattctcctgactcagcctcccgagta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585588 226 - 106955855 -------tatatgtgtgtatatatatatacacatatataaataaatgtatgtatatatataaatgtatatatatatgtgcgtatatatataaat------gtgtgtatatatatataCACtttttttttttttttgagatggagctgtgctctgtcacccaggctggagtgtgatcctggctcactgcaacctccacctccttggttcaaacaattctcctgactcagcctcccgagta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016508 184 + 51301725 -------tacgtgtgtatgtgtgtatat----------------------------------gtgtgtgtgtgtgtgtgtgtgtat--------------atatatatatatatatatatattttttttttttttgagacggagcctcgctctgtcacccaggctggagtgtgatcttggctcactgcaacctccacctctctggttcaaccaattctccccactcagcctcctgagta i papAnu2.chr19 C 0 I 135 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=780.000000 s hg38.chr19_GL949753v2_alt 17344 2 + 796479 gt s panTro4.chr19 58954177 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585814 2 - 106955855 gt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47016827 2 + 51301725 gc i papAnu2.chr19 I 135 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e chlSab2.chr6 46729579 323 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59877645 1256 + 64156825 I a score=459091.000000 s hg38.chr19_GL949753v2_alt 17346 408 + 796479 tgggattacaggcgtgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCACTGAT-GGGGTGAGTAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTTGGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcataggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc s panTro4.chr19 58954179 409 + 63644993 tgggattacaggcatgagccaccacatctgtctGTGTAATCACTGTCTGAAATCCAATGATAGGGGTGAGCAGAAAAGCTAAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGCCTGGAT-CTCCCACCTTGGAGCTGGAACTTCCTCAGAGCTGGacatttcgaccaatagactttgagtaaagcagatgacccactgtcacaggggtgggcctcatccaatcagttgaagactttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatcccctgcctgcctgccctgcagatttcagacttgccagctccccacaatcacgtgaaccaatccattaaaatcaatctctctctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102585816 403 - 106955855 tgggattacaggcgtgagccaccacgtctgtctGTGTAATCAGTGTCTGAAATCCACTGATAGGGGTGAGCAGAAAAGCTTAGAGAAGCCAGACAGATGGCCTGGCTTCCAAGTCTGGAT-CTCCTGCCTCGGAA-TGGAACTTCCTTGGAGCTGGacgtttggaccaatagactttgagtaaagcagatgacctactgtcatacgggtgggcctcatcctatcagttgaaggctttaagactttaagagaaaagactgaggtcccccaaggtggaaggaattctgcctccagactcaagctgcaatatcaagtctcccctggatctcctgcccgcctgccctgcagatttcagacttgccagccccccacaatcacgtgaaccaatccctta-----aatctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59878901 380 + 64156825 tgggattacaggtgtgagccaccacgtctgtccGTGTAATCACTGTTTGAAATGCACTGATAGGGGTGAGCAGAACTGCTAAGAGGAGCCAGACAGACAGCCTGGCTTCCAAGCCTGGAT-CTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacacactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattcggcctccagactgaggctgcaatatcaagtctcccctggatctcct----gcctgccttgcaggtttcagacttaccagcccccgacaatcacatgaaccaatccattaaaataaatatctctctc i rheMac3.chr19 I 1256 I 436 s papAnu2.chr19 47016829 374 + 51301725 tgggattacaggtgtgagccaccacgtctgtcCGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCTTGGCTTCCAAGCCTGGAT-CTCCCACCTGGGAG-----------------CTGGACATTTCAACCaatagactttgagtaaagcagatgacccACTGTCatatgggtgggcctcatccaatcagttgaaggctt----------aGAGAAAAGACTGAGGTACCCCAAGGTGGAAGGAATTGGGCCTCCAGACTCAAGCTGCAGTATCAAGTCTCCCTTGGATCTCCT----GCCTGCCCTGCAGATTTCAGACTTACCAGCCCCCGACAATCACATGAACCAATccattaaaataaatctctctctc i papAnu2.chr19 C 0 I 66 s chlSab2.chr6 46729902 377 + 50890351 tgggattacaggtgtgagccaccacgtctgTCTGTGTAATCACTGTCTGAAATGCACTGATAGGGGTGAGCAGAAATGCTAAGAGGAGC----CAGACAGCCTGGCTTCCAAGCCTGGATCCTCCCGCCTTGGAG-----------------CTGGacatttcaaccaatagactttgagtaaagcagatgacccactgtcatatgggtgggcctcatccaatcagttgaaggctt--------taagagaaaagactgaggtaccccaaggtggaaggaattgggcctccagactcaagctgcaatatcaagtctcccttggatctcct----acctgccctgcagatttcagacttaccagcccctgacaatcacatgaaccaatccattaaaataaatctctctcta i chlSab2.chr6 I 323 I 4 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M a score=12058.000000 s hg38.chr19_GL949753v2_alt 17754 28 + 796479 catatatgtatatacatgtatat----gttc-----t s panTro4.chr19 58954588 33 + 63644993 catataTGTATATACATGTATAT----Gttctttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586219 27 - 106955855 catatatgtatctacatgtgtat----gttc------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017269 37 + 51301725 tatacacacacacacatgtgtatgtgggtttttttgt i papAnu2.chr19 I 66 C 0 s chlSab2.chr6 46730283 37 + 50890351 tatacacacacacacacgtgtatgtgggtttttttgt i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45302229 1028 + 49145316 T e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=113125.000000 s hg38.chr19_GL949753v2_alt 17782 97 + 796479 cttttttttttttgagacaaagtctcactcttatcgtccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa s panTro4.chr19 58954621 97 + 63644993 tttttttttttttgagacaaagtctcactcttgtcgtccaggctggagtgcgatagt-gcaatctcggctcactgcaagctccgcctcccgggttcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586246 97 - 106955855 tttttttttttttgagacaaagtctcactcttgtcatccaggctggagtgcaatagt-gcaatcttggctcactgcaagctccgcctcccgggttcaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017306 97 + 51301725 ttgtttgttttttgagacaaagtttcactcttgtcgtccaggctggagtgcaatagc-gcaatcttggctcgctgcaagctctgcctcctgggttcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730320 98 + 50890351 ttgtttgttttttgagacaaagtttcactcttgtcatccaggctggagtgcaatagctgcaatcttggctcgctgcaagctccgcctcctgggttcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301201 97 + 49145316 Ctttctttcttttgagatggagtttcactcttgctgcccaggctggagtgcaatggc-gcgatcccagctcactgcagcctctgcctcctgcgttcaa i calJac3.chr22 T 1028 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=105959.000000 s hg38.chr19_GL949753v2_alt 17879 135 + 796479 gcaattctcctgccttagcctcctgagtagctgggattacaggtgcccaccatcacgcccggctaatttttgtatttttagtagagacggggtttcgccatgttggccacgctggtcttgaactactgacctcag s nomLeu3.chr10 102586343 135 - 106955855 ggaattctcctgcctcagcttcctgagtaactgggattacaggcacccaccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtcttgaactactgacctcag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017403 135 + 51301725 gcaattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccacgcccgactgatttttgtatttttagtagagacggggtttcaccatgttgaccaggctggtcttgaactcctgacctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730418 135 + 50890351 gcaattctcctgcctcagcctcctgagtagctgagattacaggtgcccaccaccacgcccgactgatttttgtatttttcgtagagacggggtttcgccatgttgaccaggctggtgttgaactcctgacctcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301298 134 + 49145316 gtgattctcctgcctcagcctcccgagtagctgggatcacaagcacgcgccaccgtgcccagctaa-ttttgtattttcagtagagatggggtttctccatgttggccaggctggtcttgaactcccaaccccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I e panTro4.chr19 58954718 0 + 63644993 C a score=94146.000000 s hg38.chr19_GL949753v2_alt 18014 96 + 796479 gcaatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttctat-tggttctg-tttttc s panTro4.chr19 58954718 96 + 63644993 gcaatccgcctgccttggcctcccaaagtgctgggattacaggcatgagccaccacacccggcttatatctatatgttctat-tggttctg-tttttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586478 92 - 106955855 gcaatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacccagcttatatctatatgttcta-----ttctg-tttttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017538 97 + 51301725 gtaatccacccacatcggcctcccaaagtgctaggattacaggcgtgagccaccacacccagtttatatatatatgttctat-tggttctgttttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730553 97 + 50890351 gtaatccacccacgtcggcctcccaaagtgctaggattacaggtgtgaaccaccacacccagcttatatatatatgttctat-tggttctgttttttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45301432 97 + 49145316 gtgatccacccacctcagccccccaaagtgctggagttacagacgtgagccactgtacccagccAGAACTTAGCCTTTCTGTCTGGTTATT-CCCTTC i calJac3.chr22 C 0 I 53 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=42161.000000 s hg38.chr19_GL949753v2_alt 18110 55 + 796479 tggaaaaccctggctaacacaGACATGATCTCAGCTCTTAACTTCAAACATATTT s panTro4.chr19 58954814 55 + 63644993 tggaaaaccctggctaacacagacttgatCTCAGCTCTTAACTTCAAACATATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586570 55 - 106955855 tggaaaaccctggctaacacaCACATGATCTCAGCTCTTGACTTCAAACGTGTTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017635 50 + 51301725 tGGAAAACCCTGGCTAATAcagacacgatctcagctct-----tcaaacacattt i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46730650 55 + 50890351 tggaaaactctGGCTAACACAGACATGATCTCAGCTCTTAACCTCAAACACAttt i chlSab2.chr6 C 0 I 28 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=7367.000000 s hg38.chr19_GL949753v2_alt 18165 17 + 796479 CCTTTTTCTTTTTTTAA s panTro4.chr19 58954869 17 + 63644993 CCTTTTTCTTTTTTTAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586625 15 - 106955855 --TTTTTCTTTTTTTAA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017691 17 + 51301725 cttttttttttttttta i papAnu2.chr19 I 6 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301529 53 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=6371.000000 s hg38.chr19_GL949753v2_alt 18182 11 + 796479 AG---GAGAGAGAG s panTro4.chr19 58954886 11 + 63644993 AG---GAGAGAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586640 14 - 106955855 agagagagagagag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017708 11 + 51301725 aa---gagacagag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301582 11 + 49145316 AA---GAGAGAGAA i calJac3.chr22 I 53 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=50408.000000 s hg38.chr19_GL949753v2_alt 18193 125 + 796479 AGATGTGAAAGGACGGGATGTGAAGATTATGGGGAGAGGGTGAGGGCAATggaggggagaggaggggaga----------ggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt s panTro4.chr19 58954897 135 + 63644993 AGACGTGAAAGGATGGGATGTGAAGACTATGGggagagggtgagggcaatggaggggagaggaggggagaagaggggagaggagggAGGTCACA-----------GATGGGAGCTCAGGATGCCAATCCCAGATGTGCCAATgggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586654 136 - 106955855 agagGTGAAAGGATGGGATGTGAAGATTCTGGggagagggtgagggcaatggaggggagaagaggggaga----------ggagggaggtcacagaatgggctgggatgggagCTCAGGGTGCCAATCCCAGATGTGCCAATgggt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45301593 122 + 49145316 ACACATGAAAGGACGGGATGTGAAGACTGGGGGGAGAGGGTGAGGGCTATGGAGGGGAGAGGAGGTCACA-------------GGCCGGGCAGG-----------AGTAGGGGCTTAGGGCACCAGTCCTGGATGTGCCAGTGGAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e papAnu2.chr19 47017719 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=3386.000000 s hg38.chr19_GL949753v2_alt 18318 4 + 796479 tccc s panTro4.chr19 58955032 4 + 63644993 tccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586790 4 - 106955855 tccc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017719 4 + 51301725 tctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45301715 4 + 49145316 TCCC i calJac3.chr22 C 0 I 2530 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=613.000000 s hg38.chr19_GL949753v2_alt 18322 2 + 796479 at s panTro4.chr19 58955036 2 + 63644993 ac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586794 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017723 2 + 51301725 ac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730705 28 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879281 436 + 64156825 I a score=301761.000000 s hg38.chr19_GL949753v2_alt 18324 234 + 796479 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagccaacttCAAACACACTTCAATGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA s panTro4.chr19 58955038 234 + 63644993 tgttgcccaggctagagtgcagtggtgtgatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAATGAGCTCATTGATGCCAGGTAATGAACAGCAGTGACACGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTAGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102586796 234 - 106955855 tgttgcccaggctggagtgcagtggtgcgatcatactcgaattcctgagctcgagtggtcctcctcactcggcctcca-gggtagctgggagtacagaccaccacgcccagcCAACTTCAAACACACTTCAAAGAGCTCGTTGATGCCAGGTAATGAACAGCAGTGACAAGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGACATGATTCCCCAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59879717 234 + 64156825 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagtggtcctcctcactcggcctcca-gggtagctgggagtacagatcactgcgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTAGAGTGGGGAGGGGTGGGGCTCTCTGAAGGAGATATGATTCTCCGAGA i rheMac3.chr19 I 436 C 0 s papAnu2.chr19 47017725 223 + 51301725 tcttgcccaggctggagtgcagtggtgcaatcatactcgaattcctgggctcaagcggtcctcctcaCTCGGCCTCCAggggtagctgggagtacagatcaccacgcccagccaacttcAAACACACTCCAATGAGCTCGTTGACACCAGGTAACGAACAGCAGTGACATGGGCATGGAAGGCGTTTagagtggggaggggtggggttcTCTGAAGGAGACAC------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46730733 234 + 50890351 tgttgcccaggctggagtgcagtggtgcaatcatactcgaattcctggcctcaagcggtcctcctcactcggcctcca-gggtagctgggagtacagatcaccacgcccagcCAACTTCAAACACACTCCAATGAGCTCGTTGACGCCAGGTAACGAACAGCAGTGATGTGGGCATGGAAGGCGTTTAGAGTGGGGAAGGGTGGGGCTCTCTGAAGGAGACATGATTCTCCGAGA i chlSab2.chr6 I 28 I 41 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1746.000000 s hg38.chr19_GL949753v2_alt 18558 3 + 796479 CAC s panTro4.chr19 58955272 3 + 63644993 CAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587030 3 - 106955855 CAC i nomLeu3.chr10 C 0 I 4 s rheMac3.chr19 59879951 3 + 64156825 CAC i rheMac3.chr19 C 0 I 119 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017948 0 + 51301725 C e macFas5.chr19 54882420 20327 + 59248254 M a score=5373.000000 s hg38.chr19_GL949753v2_alt 18561 13 + 796479 AGAACAAGGGATC s panTro4.chr19 58955275 13 + 63644993 AGAACAAGGGTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587037 13 - 106955855 ACGACAAGGGATC i nomLeu3.chr10 I 4 C 0 s papAnu2.chr19 47017948 13 + 51301725 AGAACGAGGGATC i papAnu2.chr19 C 0 I 22 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=15005.000000 s hg38.chr19_GL949753v2_alt 18574 55 + 796479 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGAGCAGGGTAGA s panTro4.chr19 58955288 55 + 63644993 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGGGTTAGACCAGGGTAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102587050 55 - 106955855 AGCTGGGAGAATTCAGGGAGGATTCCTAATAAGAACAGAGTTAGACCAGGGTAGA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55819239 2486 + 60714840 M e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=7272.000000 s hg38.chr19_GL949753v2_alt 18629 14 + 796479 AAAGAATGACCAGT s panTro4.chr19 58955343 14 + 63644993 AAAGAATGACCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821738 14 + 60714840 AAAGAATGTCCAGT i ponAbe2.chr19 M 2486 C 0 s nomLeu3.chr10 102587105 14 - 106955855 AAAGAATGACCAGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e calJac3.chr22 45301719 2530 + 49145316 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=639731.000000 s hg38.chr19_GL949753v2_alt 18643 895 + 796479 ggccgggcac-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactgaaaatataaaaaataagctgggcatggtggcgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcactgcatcatacactcaactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaac-------------------aaaacaaaacaaaaaaaacTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtcttaacaacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAGCAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCCCGTTT--------------TTTGTTTTTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAAAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCATTGGCATTt s panTro4.chr19 58955357 893 + 63644993 ggccgggcgt-ggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggcgcatgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggagggggaggttgcagtgagccgagatcgcatcactgcatcatacactcgactgaccaagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAAaaaacaaaaac-------------------aaaacaaaacaaaacaaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcatagcgttttaaagtctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGTGTCCAAAGCTCACAGCGTTGAGGAAGAGAGAGCAACCTGTTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCC-GTTT--------------TTTGTTATTCTTGGCACTTTAGATTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGCAGCAGAAACGTGATTAAGGA-AAAAAGTTGAGCAACTATAGAAGTGAGGCCCCAGAGAGGGGCTTCACCAAGACCCCCGCTATCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCACATTACAGAGCCAAGTCTGAGATGCTTTACACACCTGGTCCTCTGCACCAACAGAGGGTCTCCCATCCAGACGCTTCCCCTACTTGGTTC----GCTATGTT-----TGCGTTGGCATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55821752 913 + 60714840 ggccgggcgcgggtggctcacgcctgtaatcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcaagagcagcctggccaacatggtaaaaccctgtctctactaaaaatataaaaaataagctgggcatggtggtgcacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcatcattgcatcatacactcgacagactgagactccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTAaaagacaaaaacaaaaaattaaacaaa----aaaacaaaacaaaa-aAactagttcttgagcaatactgccaggcaagtctacatcacagcattttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagaGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGGGTTGCGTCCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGTTACTAAAGCTAGGTGACAGAGTCCATGCAGTTTCCCCC-GTTT--------------TTTGTTTTTCTTGGCACTTCAGAGTCAAGAAACACAAGTCGTGAGACTTTAAGGAGTAAGTAGCAGAAACATGATTAAGGA-AAAAAGTGGAGCCACTAAAGAAGTGAAGCCCCTCTCTGGGGCTTCACCAAGACCCCCACTATCTTTATTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGCTCTGTAGTCACATTACAGAGCCAAGTCTGCGATGCTTCACACGCCTGGTCCTCTGCACCAACAGAAGGTCTCCCATCCAGACCCTTCCCCTACTTGGTTC----ACTGAGAGAGAAATGCGTCGGCATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102587119 855 - 106955855 ggccgggcgc-ggtggctcatgcctgtagtcctggcactttgggagagtgaagtaggtggatcacttgaggtctggagttcgagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatataaaaaataagctgggcatggtggcacacgcctgtagtcccagctactcaggaggctgagagaagagaattgcttgaacctgggaggcggaggttgcagtgagccgagattgcaccactgcatcatacactcgactgaccgagaccccaactcaaaaaaGCATCCCTCTCAGGAGATAAAATTTCTACCAATTaaaaaacaaaaacaaaaaatcaaacaaaaaacaaaacaaaacaaaa-aaaCTAGTTCTTGAGCAATATTGCCATGCAAGTCtacatcagagcgttttaaattctta-caacaaccctgcaaggtagtacaattatttccctcccactggtgaagGGCATGCATTCCCGTGTGACTCCTGGGATTACAACAAGCGTTGCGTGCAAAGCTCACAGCGTTGAGGAAGAGCGAGCAACCTGGTACTAAAGCTAGGCGACAGAGTCCATGCAGTTCCCCCA-GTTT--------------TTTGTTCTTCTTGGCACTTTAGAGTCAAGAAACACAAGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATT-------------------------------------------------------------CCGCTGTCTTTGTTAGTGTGCTTTGAGTCTGAGAATTTTTCCTAGGTGTGCAATGATCTGTGGTCGCATTACAGAGCCAAGTCTGAGATGCTTCACATGCCTGGTCCTCTGCACCAACAGAGGGTCTCCCGTCCAGACCCTTCACCTACTTGGTTCACTGACTATGTT-----TGCGTTGGCATTT i nomLeu3.chr10 C 0 I 318 s calJac3.chr22 45304249 872 + 49145316 ggctgggcgc-ggtggctcacacttgtaatcccagcactttgggaggccgaggcgggtggat--cctgaggtcaacagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgggcctgtaatcccagctactcgggaggctgaagcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcaccattgc----------------------actccagcctgggtaa----------caagagtgaaactgtgtctcaaaagcaaagc-aaaac-------------------aaaacaaaacaaaaaaaaCGAGTGCTTGAGCAATATCGCCATGTAAGTCTACGTCGtagcgtgttaaattctta-caacaaccctgcaaggtagcaccattattcccatcccactggtgaagGGCACACGTTCCCATGTAACTCCCGGGATTATGACAAGGGTTCCTTCCAAAGCTCACAGCGTTGAGGGAGAGTGAGCAGCCTGTTAGTAAGTCTGGGTGACGGAGTCCATGCAATTCCCCtg-tttttgtttttgtttttgtttttttttCTTGGCACGTGAGGTTCAGGAAACACACGTCATGAGACTTTAAGGAGTAAGTAGCAGAAACATGATCGAACACAAAAAGGTGAGCAACTTCGGAAGTGAAGCCCCAGAGCGGGGCCTCACCAAGACCCTCACTGTGTTTGTTAGTGTGCTTGGAGGCTGAGAATGCTTCCTGGGTGTGCGATGACCTGTGGCCACATCGCAGAGCCGCGTCTGAGATGC-TCACACGCCTGGTCCTCTGCACCAACAGA--GCTTCCCATCCA-ACCCTTC-CCTACTTGGTTCCCTCGCTGTGCT-----TGCGTCGGCATTT i calJac3.chr22 I 2530 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=156268.000000 s hg38.chr19_GL949753v2_alt 19538 259 + 796479 ctacatatctatatatagagaattacctatctaatttatctatctcgctaatctatctaccatctgtctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgatttatctatctacctacttgcctatcacctatccaatctatctatcctatcatatgtaattaactatctgtctgtcta---atttttctatcttgttaa s panTro4.chr19 58956250 259 + 63644993 CTACATATCTATATATAGAGAATTACctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtctctgtacctacttacctatcatctatccaatctatc-cgtcctatctaattatgacttatctatctacctacttgcctatcacctatccaatctatctatcCTATCATATGTAATTAACTATCTGTCTGTCTA---ATTTTTCTATCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55822665 258 + 60714840 CTACATGTCTATATAGAGTGAATTACCTATCTAATTTATCTATCTCGCTAATCTATCTACCAtctatctaggtatctattatctatctacctatcta----tatctgtttctctacttacttacctatcatctgtccaatctatc-cgtcctatctaattatcacttatctatctacctagttgcctatcacctatccgatctatctatcctatcatatgtaattaactatctatctgtctgtctaATTTTCTATCTTGTTAA i ponAbe2.chr19 C 0 I 359 s nomLeu3.chr10 102588292 242 - 106955855 CTACATGTCTATATATAGAGAATtacctatctaatttatctatctcgctaatctatctaccatctatctaggtatctattatctatctacctatctatctttatctgtttctctacctacttacctatcatctatccaatctatc-tgtcctatctaattatcacttatctatctacctacttgcctatcacctatccaatctatcc---------tatgtaattaa--------ctgtcta---atttttctatcttgttaa i nomLeu3.chr10 I 318 C 0 s calJac3.chr22 45305121 181 + 49145316 CTACAGACCTATGCAGGGAGAAGTACCTGCCTAATTTATCTGTCTCACTCAtctgtc----------------------catctgtctgcctagctatctttatctgtctctctacctacttacctatcatctatccaatctatcttgtcacatctaattatc---tatctatctttcta------------------------------------------------------tctgtgta---attttcctgtcttgctaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=24832.000000 s hg38.chr19_GL949753v2_alt 19797 58 + 796479 tctatcacttatctaggcatctatgtatctatctttatctgtctatccacctgcttac s panTro4.chr19 58956509 58 + 63644993 TCTATCACTTATCTAGGCAtctatgtatctatctttatctgtctatccacctgcttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588534 58 - 106955855 tctatcgcttatctaggcatctatgtatctatctttatctgtctattcacctacttac i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45305302 48 + 49145316 tctatcacctatctagacatcta----------tctatctgtctatccacctaattac i calJac3.chr22 C 0 I 1392 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=69663.000000 s hg38.chr19_GL949753v2_alt 19855 195 + 796479 ctgctgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagttaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatct----atcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctattct-- s panTro4.chr19 58956567 199 + 63644993 ctgttgtctatctaatctatccatcctatcatatctaattatc-----acttatctatc-------taccgacttacctatcatctagctaccaaatctatcatctatctaatgtatctatcaatcataaccagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactattatctatttaatctactct-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102588592 199 - 106955855 ctgtcgtctgtctaatctatccatcctatcatatctaattatc-----acttatctatc-------tactgacttacctatcatctagctaccaaatctatcagctatctaatgtatctgtcaatcataactagttatctatcatctctctatcatctatcatctgtatgtatctgtctattcacctactataatctatttaatctatcct-- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306742 193 + 49145316 ctatcatctatctaatgtatctatcc-attgtacctaattatccaattgatcatctatcttatctatatcaagttatctatcatctatct----aatctatcatctatctaatgtatctatcCATTGTACCTAATTATCCA--AGTG----ATCatctatc--ttatctatatcaagttat-------ctatcatctatctaatctatcatct i calJac3.chr22 I 1392 C 0 e canFam3.chr1 19467539 817 - 122678785 I e ponAbe2.chr19 55822923 359 + 60714840 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=124117.000000 s hg38.chr19_GL949753v2_alt 20050 220 + 796479 atctagt-tatctatctatctatccacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatctgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc s panTro4.chr19 58956766 220 + 63644993 atctagt-tatctatctatctatctacc----------------tacttatctaat---ttttctatcttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccgtgtatctgtatatctatctatctatctagctagctttatctagctacctagttacctatcatctatctatctaatctatcatctatctaatgtatctatcaatcatatctaattatctgtctatctaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823282 213 + 60714840 atctagt-tatctatctatgtatctacc--------------------tatctaat---ttttctatctTG-------CAA---CTCTTATCACctatctaggtatcta-----tgtatctatccatgtatctgtatatctagctagctagctagctagcttgattgagctacctagttacctatc----atctatctaatctatcatctatctaatgtatctaccaatcatatctaattatctgtctatctaatc i ponAbe2.chr19 I 359 C 0 s nomLeu3.chr10 102588791 227 - 106955855 atctagt-tatctatctatctatctatctatctatctatctatctacctatctaat---ttttctattttg-------caa---ctc-tatcacctatctaggtatcta-----tgtatctatccatgtatctgtatgt----ctatctatctagctagctttatctagctacctacttacctatc----atctatataatctatcatctatctaatgtatctatcaatcatatctaattttctatcta-atcatc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45306935 223 + 49145316 atctaatgtatctatcaat---tgtacc----------------taattatccaattgatcatctatcttatctatatcaagttatc-tatcatctatcta---atctatcatctgtatctaccta-----ctgaggat-catctatctaatctatcatctgtatctatctacctactcacctatcatctgtctacctaatctatcatctatctaatgtatctatccattgtacctaattatccaattg----atc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e chlSab2.chr6 46730967 41 + 50890351 I e papAnu2.chr19 47017961 22 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=169802.000000 s hg38.chr19_GL949753v2_alt 20270 146 + 796479 atctatcttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcgtctatttatctatctaatct---atcatatctagttatctatctacttact-------tatcta----acctgttg s panTro4.chr19 58956986 150 + 63644993 atctatcttatctattatatctagttacctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatctacttact-------tatctatctaacctgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823495 138 + 60714840 atctatcttttctattatctctagttatctatcatctagctag--------------------------------ctagctaatctatctg---------------gatctacctacttacctatcatctatttatctatctaatct---atcatatctagttatctatc----tatc-------tatcta----acctattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589018 146 - 106955855 atctaccttatctattatatctagttatctatcatctagctag--------------------------------ctagctaatctatctg-----------tatctatctacctacttacctatcatctatt----tatctaatct---atcatatccagttatctatctagttact-------tatctatctaacctattg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47017983 128 + 51301725 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctatctattg---------------------------- i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46731008 124 + 50890351 atctattttatctactatatctagttatctatcatctagctag--------------------------------ctagctaatc-atctg-----------tatctatctacctacttacctattatccatttatctatctaacct---atcatatctagttatctattg-------------------------------- i chlSab2.chr6 I 41 C 0 s calJac3.chr22 45307158 196 + 49145316 atctatcttatc---tatatcaagttatctatcatctatctaatctatcatctgtatctacctaCTGACGATCATCTGTCTAATCTATCTGCCAtatctagttatctgtctacctacttgcctattacctatt----tatctagtctgtcatcatatgtagttatgtatctacctaccgtctatgtctctatctaatctattg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59879954 119 + 64156825 I a score=627254.000000 s hg38.chr19_GL949753v2_alt 20416 336 + 796479 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatcg-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctgcctacttgcctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatatttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa s panTro4.chr19 58957136 336 + 63644993 tatctagttatctatctacctacttacctatcatctgtctatctatctaatctgtccatca-tatctagctacttatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatcttcctatttacctat----tatctatcacatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggggagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823633 332 + 60714840 tatctagttatctatctacctacttacctatca----tctatctatctaatctgtctatca-tatctagctactgatctacctatcatcta--tgtatctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatttaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGAGAgcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcccgactttgtaaatgttcccttccctttctggaatacgttattttttggttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589164 280 - 106955855 tatctagttatctatctacctgc-----------------------------------------------------ttaacctatcatc------tgtctatctaatctatcatatctagttatctatttatctacctacttacctat----tatctatcatatctaattatctatctat-cCCCCTCCCTGAAATAAGGTTCTTTCTGAGCTGATCATCAGggagcagcaaaaggagtggagagtttgaaacaagacatacttgagttctagtactgggtctcctacctcctgactttgtgaatgttcccttccctttctggaatacgttattttttggttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880073 332 + 64156825 tatctatttatctatctacctacttacctatcacctgtctc----tctaatccatctatca-tatctagctacctac----ctatcatcta--tgtatctatcttatctatcatgtctagttgtctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttat-cCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACAAACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCTGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i rheMac3.chr19 I 119 I 417 s papAnu2.chr19 47018111 340 + 51301725 tatctaattatctatctacctacttaactatcatctgtctctctatctaatccgtctatcattatctagctacctacctagctatcatcta---gtatctatcttatctatcatgtctagttatctatttatctacctacttacctatcatctgtctatcatatctaattatctatttat-ctCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGATCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTAGTAGGTCTCCCATCTCCCGACTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731132 324 + 50890351 tatctaat----tatctacctacttaactatcatctgtcta----tctaa----tctatca-tatctagctacctac----ctatcatcta---gtatctatcttatctatcatgtctagttatctatgtatctacctacttacctatcatctgtctatcatatctaattatctatttatcCCCCCTTCCTGAAATAAGGCTCTTTCTGAGCTGCTCATCAGGGAGCAGCAAAAGGAGTGGAGAGTTTGAAACAAGACATACTTGAGTTCTAGTACTAGGTCTCCCATCTCCCATCTTTGTAAATGTTCCCTTCCCTTTCTGGAATACATTATTTTTTGGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307354 305 + 49145316 tatcta---------ctacctgcttctct--------cctatttatctaa----tctatca-tatctagctatctac----ctaccatctatctacatctatctaATGTATCATATCGAGTTACCTA--------CCTACTCACCTGTCATCTGTCTATCATATCTAAGTATCTGT-----CTCCCTCCCTGAAATAAGGCTCTGTCTGAGCAGACCATCAGCcagcggcaaaaggagtggattctttgtaacaacgcacgcttgggttctagtactgagtctcccacctgccgactctgtaaatgttcccttccctttctggaatacgttattctttggttaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=10192.000000 s hg38.chr19_GL949753v2_alt 20752 4 + 796479 atat s panTro4.chr19 58957472 4 + 63644993 atat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823965 4 + 60714840 atat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589444 4 - 106955855 atat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880822 4 + 64156825 ATAT i rheMac3.chr19 I 417 C 0 s papAnu2.chr19 47018451 4 + 51301725 ATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731456 4 + 50890351 ATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307659 4 + 49145316 atat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19467539 817 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=1354260.000000 s hg38.chr19_GL949753v2_alt 20756 514 + 796479 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcgctcagtctagaaactgactcattgtGTCGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCTACACCCATCTCTCTCTGTAATAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAATGCCTTGGAATTTA--CATGCCCGGGACAAACTGCCAC--TGACGGCTGT--------------GGGGACCCCAGCTCC-CTAGCCTCT---------GGTCTTCGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATGGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTTGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT s panTro4.chr19 58957476 514 + 63644993 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGATATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAACTCCAAACGCCTTGGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------AGTCTTTGACCTTCTCTGTCTCCACTGC--TTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACACTCGTTTAATCTATTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55823969 515 + 60714840 aaaga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGTGCTCCAAATGCCTTTGAATTTA--CATGCCCGGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACAGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589448 514 - 106955855 aagga-gggggcagagagctaataatatctaacttgaagagttaggtaatgatgaaaaatcctggctttaaagcactcagtctagaaactgactcattgtGTAGGATAATGGGATTGTAGGTATAATGATGA-TTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCTATGTTCCCCAGATCCCTTTCCCACTTTTATGCATTCTAGATCGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGTATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGGGCAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-ATAGCCTCT---------GGTCTTTGACCTTCTGTGTCTCCACTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCCAGCCCTTCTTCCCC---ACT-CCCTAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59880826 511 + 64156825 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACGTCCA----TCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCGGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCT---------GGTGTTTGACCTTCCCTGTCTCCGCTGC-TTTTCTGCAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018455 516 + 51301725 AAGGAGGGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGtataatgatgattttttttcaccCAATATTCCACCCACGCCCATCTCTCTCTGTAACAGATTCTGTCAATGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTgtggcttctttccctttccaaAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCGGAACAAACTGCCAC--TGACTGCTGT--------------CAAAACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGC-TTTTCTGTAGGATTGAGCCAAAGATACCATCTGAGGGACACGGATATCCCACCCTTGTTTAATCTCTTTTCCTCCTGGCCCTTCTTCCCC---ACT-Ccctaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731460 516 + 50890351 AAGGA-GGGGGCAGAGAGCCAATAATACCTAACTTGAAGAGTTAGGTAATGATGAAAAATCCTGGCTTTAAAGCACTCAGTCTAGAAACTGACTCATTGTGTAGGATAATGGGATTGTAGGTATAATGATGATTTTTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTCCCATTTTTATGCATTCTAGATTGTGGCTTCTTTCCCTTTCCAAAGTGAACATTTGCATCTCTTCTTTGGGGGACTGCCTGGGAGAGCTCCAAATGCCTTGGAATTTA--CATGCCCAGAACAAACTGCCAC--TGACTGCTGT--------------GAAGACCCCAGCTCC-CTAGCCTCC---------GGTCTTTGACCTTCCCTGTCTCCACTGCTTTTTCTGCAGGATTGAGCCAAAGATACCATCTTGGGGACACGGATATCCCACTCTTGTTTAATCTCTTTTCCTCCCGGCCCTTCTTCCCC---ACT-CCCTAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45307663 516 + 49145316 aagga-ggaggcagagagctaataatatctaacttgaggagttaggtaatgatgaaaaatcctggctttcaagcactcagtctagaaactgactcactgtGTAGGATAATGGGATTGTAGGTATAATGATGA---TTTTTCACCCAATATTCCACCCACACCCATCTCTCTCTGTAACAGATTCTGTCAGTGTTCCTCAACCCATGTTCCCCAGATCCCTTTACCATTTTTATGCATTCTAGATCGAGGCTTCTTTCCCTTTCCAAAGTGAACACTTAGGTCTCTTCTTTGA------GCCAGGGAGGACTCAAAATGCCTTGGAATGTA--TATTCCCTG-CCAAACTGCCAC--TGCCTGCTGTTTGCAGGGAAATAGAAAGACCACAGCTCC-----CCTCC---------CGTCTTTGACCTTCTCTGTCTCCACTGC-TTTTCTGCAGAATTGGGCCAAATATACCATCTGAGGGACATGAATATCCCACCCGTGTTTAATTTCTTTTCCTCCCAGGCCTTCTTCCCC---ACTCCCCTAAAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19468356 518 - 122678785 AAGGA-CAGGG--GCGGGATGAGAATCCCTAACTTGAAGAGCTGGGTAATGATGGAAGGCACTGGCTTCAAAGCACAGAGCCT-GGATCTGACTCATGATGTAGGATAATGAGATTGCGGTGATAACGATTA--TTCTCTCTCCCGATATCCCACCCACACCTGTCTCCCTCTGTAACAGACGATGCCAGTGCTCCACACTGCTTG---CCCAGATCCCTTTGCCATTTTAATGCGCTCTGGATCATGGTTTATTTCACCTTCCAATGCGGACACTTGCTTCTCTT-TGTGGGGGACTGCCAGGAAGGACCCAAAATGCCTCGGGATCTATGTATTCCAGGGACATCTCTTTACCATGACTGCCATTTGTGGAAGCAT--GAATGCCCTAGTTCTGTTGGTCACCAGTTGCCAGGGTGTGTGACCTTCTATGTCTCCTCCAC-TTTCC--CAGCTCCATGCAAAAGATGCGGT-GGAGGGATG-------------ATTGCTCAGTC-CTTTACTTCTCAGCCCTCTTTCCCCTGTACC-CCCTACAAT i canFam3.chr1 I 817 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=19977.000000 s hg38.chr19_GL949753v2_alt 21270 10 + 796479 GTAATTTTCA s panTro4.chr19 58957990 10 + 63644993 GTAATTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824484 10 + 60714840 GTAATTTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589962 10 - 106955855 GTAATTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881337 10 + 64156825 GTCATTTTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018971 10 + 51301725 gtcattttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731976 10 + 50890351 GTCATTTTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19468874 10 - 122678785 GTTACATTCA i canFam3.chr1 C 0 I 49 e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=374368.000000 s hg38.chr19_GL949753v2_alt 21280 216 + 796479 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagagcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatagaatattagctgggtgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga s panTro4.chr19 58958000 216 + 63644993 Agccaggcgtggtggctcacacctgtaatcccagcactttgggaggtcgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaataaaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaatctcttgaacctggtaggcgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824494 216 + 60714840 agccaggcatggtggctcacgcctataatctcagcgctttgggaggtcgaggcgggcagatcacctgagctcaggagtttgagaccagcctgaccaacatgtagagactccacctctactaaaaatacaatattagctgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaaccccgtaggcaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102589972 216 - 106955855 Agccaggcacggtggctcacgcctgtaatcccagtactttggaaggtcgaggcgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaatattagccgggcgtggtggtgcatgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaacccggtaggcgga i nomLeu3.chr10 C 0 M 1381 s rheMac3.chr19 59881347 216 + 64156825 Cgccgggcgtggtggctcactcctgtaatctcagcactgtgggaggccaaggtgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacacagagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47018981 216 + 51301725 cgccgggcatggtggctcactcctataatctcagcactgtgggaggccaaggtgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtagtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46731986 216 + 50890351 Cgccgggcgcggtggctcacacctgtaatctcagcactgtgggaggccgaggtgggcggatcacctgagatcgggagttcgagaccagcctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e macFas5.chr19 54882420 20327 + 59248254 M a score=117536.000000 s hg38.chr19_GL949753v2_alt 21496 97 + 796479 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC s panTro4.chr19 58958216 97 + 63644993 ggttgc-agtgagccaagatcacgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaactaaataaataat-aaataaaataaaaC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824710 97 + 60714840 ggttgc-agtgagccgagatcatgccattgcactccagcctgagcaacaagagcaaaactctgtctcaaaactaaataaataat-aaatgaaataaaaC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59881563 98 + 64156825 ggttgc-agtgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019197 99 + 51301725 ggttgcaaatgagccaagatcatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaataaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732202 94 + 50890351 ggttgc-agtgagccaagaccatgccactgcactccagcctgggcaacaagagcgaaattctgtctcaaaaataaataaataataaaataaaaTA---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e calJac3.chr22 45308179 0 + 49145316 C e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=15472.000000 s hg38.chr19_GL949753v2_alt 21593 17 + 796479 GTCAC----------TTTCACACTAAT s panTro4.chr19 58958313 17 + 63644993 GTCAC----------TTTCACACTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824807 17 + 60714840 GTCACNNNNNNNNNNtt---------- i ponAbe2.chr19 C 0 I 4 s rheMac3.chr19 59881661 17 + 64156825 GTCAC----------TTTCACACTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019296 17 + 51301725 atcac----------tttcACACTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732296 16 + 50890351 -TCAC----------TTTTACACTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308179 17 + 49145316 GTCAC----------TTTTGCACGAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=69553.000000 s hg38.chr19_GL949753v2_alt 21610 58 + 796479 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA s panTro4.chr19 58958330 58 + 63644993 GCTGTCTAAGAGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAAAAGCAACAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59881678 58 + 64156825 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGGACCCCTCAAAAGCAACAA i rheMac3.chr19 C 0 I 8 s papAnu2.chr19 47019313 58 + 51301725 GCTTTTTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAACCCCTCAaaagcaacaa i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 46732312 58 + 50890351 GCTTTCTAAGGGCCTGCTTCTGGTGGAGCTGAATCAGAGAATCCCTCAAAAGCAACAA i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45308196 54 + 49145316 ----GCTAAGAGCCTGCTTTTGGTGGAGCTGGATCTGAGAACACCTCAAGGGCAACAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e ponAbe2.chr19 55824824 4 + 60714840 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=71081.000000 s hg38.chr19_GL949753v2_alt 21668 52 + 796479 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg s panTro4.chr19 58958388 49 + 63644993 -ttttttt---ttttttt---gagaca--atctc----tgtctcccaggctggagtgcagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824828 52 + 60714840 -ttttttt---tttttt----gagaca--gtctcactctgtctcccaggctggagtgcagtg i ponAbe2.chr19 I 4 C 0 s rheMac3.chr19 59881744 54 + 64156825 -ttttttt---tttttt----gagacagagtcttactctgtcaccctggctggagtgcagtg i rheMac3.chr19 I 8 C 0 s papAnu2.chr19 47019379 58 + 51301725 -ttttttt---tttttttttggagacagtgtcttactctgtcaccctggctggagtgcagtg i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 46732378 61 + 50890351 -tttttttttattttttttttgagatagagtctcactctgtcaccctggctggagtgtagtg i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45308250 58 + 49145316 ttcttttttaatttttt----gaaacagagtctcactctgtcgcccaggctggagtgcagtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e nomLeu3.chr10 102590188 1381 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=24930.000000 s hg38.chr19_GL949753v2_alt 21720 13 + 796479 gtacaatctcggc s panTro4.chr19 58958437 13 + 63644993 gtacaatctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824880 13 + 60714840 gtacaatctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591569 13 - 106955855 GTAcaatctcagg i nomLeu3.chr10 M 1381 C 0 s rheMac3.chr19 59881798 13 + 64156825 gctcaatcttggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47019437 13 + 51301725 gctcaatcttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732439 13 + 50890351 gctcaatcttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308308 13 + 49145316 gtgcaatctcggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=365110.000000 s hg38.chr19_GL949753v2_alt 21733 222 + 796479 --tttggaacctccccctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcacccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaactccagagctcaagtgttctgcccactttggcctcccaaagtgctgggatta----cataagccaccatgcctggc s panTro4.chr19 58958450 221 + 63644993 --tttggaacctccacctctggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcaccccgctaattttttatatttctagtagagatgaggtttcaccatgttggttaggctggtctcaaattccagagctcaagtgttctgccc-ctttggcctcccaaagtgctgggatta----cataagccaccatgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55824893 222 + 60714840 --tttgcaacctccgcctccggggttcaagcaattctcctgcctcagcctcccaaggagctgggattacaagcgcccgccacctcgccccgctatttttttatatttctagtagagatgaggtttcaccatgttggctaggctggtctcaaactccagagctcaagtgttctgcccaccttggcctcccaaagtgctgggatta----catgagccaccatgcacggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591582 222 - 106955855 --tttgcaacctccacgtccggggttcaagcaattctcctccctcagcctcccaaggagctgggattacaagcgcccgccacctcaccctgctaattttttatatttctagtagagatgaggtttcaccatgttgcctaggctggtctcaaactccagagctcaagtgttctgcccacctttgcctcccaaagtgctgggatta----catgagccaccatgcccggc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019450 225 + 51301725 --tttgcaatctccgcctccggggttcaggcaattctcctgcctcagcctcccaaggagctgggattacaggtgcccaccaccacgctctgctaattttttatatttctagtagagatgaggtttcaccatgttggccaggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732452 225 + 50890351 --tttgcaatctctgcctccagggttcaagcaattctcctgcctcagtctcccaaggagctgggattagaggtgcccgccaccatgccctgctaattttttatatttctagtagagatgaggtttcaccatgttggccgggctggtctcgaactcctgagctcaggtgatc-gcccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308321 228 + 49145316 tcactacaacctccacctcctgggttcaagagattctcctgcctcagcctcccaaggagctgggattacatgtacctgccagcacaccctgctgatttttcatatttttagtagagacaaggtttcaccatgttggccaggctggtctcaaactcttgggctcaagtgatctgcccaccttggcctcccaaagtgctaggattacaggcacgagccactgcgcccagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19468884 49 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=818858.000000 s hg38.chr19_GL949753v2_alt 21955 429 + 796479 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACGGTATCTTTCACACAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCATCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATGTTGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCGTGAGCAACAAGATACAGCCTGACACGGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGTCAAGTCTTGTGTGATAAAATTCATCTTCATTC s panTro4.chr19 58958671 429 + 63644993 cATAAGCAAGAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACACAGCAATTCACTAGAAGTGAGAAGTACATTATTGCAAAA--TTCTCATCTTCGTATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACAGATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATCATAACTTGCTACGC-------TACTAAAGTCAGCATGAGCAACAAGATACAGCCTGACACAGGGCATAAATGGAGGCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825115 429 + 60714840 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCACATGGAAGCAGAGAAACAGCAGCCTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAAGTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTCGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGAAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGCCTGAGCAACAAGATACATCCTGACACGGGGCATAAATGCGGCCACAGGCACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102591804 428 - 106955855 cATAAGCAACAATTCTATCAGTGCATCTCCAAGGACTTATGAAAACAGGGCAGGAACAGCTGCTCCTGGACTC-TCAGTTTCCCCAGATGGAAGCAGAGGAACAGCAGCGTTGCCTTGTCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTTGTCTTCATATGA-CCCCATAATCAGCTGAACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCGCATCAGTATTTGCAAATTGCCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAACATACAGCCTGACAC-GGGCATAAATGGAGCCACAGACACCAGAAAGAAAGCCAAGTCTTGTGTGATAAAATTCATCTTCATTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47019675 432 + 51301725 cataagcAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACAGGTCAGGAACAGCTGCTCCTGGACTCTTCTGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCATGCAGCAATTCACTAGAAATGAGAAGTACATTATTGCAAAA--TTCTGGTCTTCACATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCCAAAATTTCACATCAGTATTTACAAATTGTCAGAATAAATTATAAGTTGCTATGC-------TACTAGAATCAGACCGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGAAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46732677 431 + 50890351 cATAAGCAACAATTCTATCAGTGCATTTCCAAGGACTGATGAAAACCGGGCAGGAACGGCTGCTCCTGGACTCTTCCGTTTCCCCAGATGGAAGCAGAGAAACAGCAGCCTTGCCTCATCCTTTCTGTTCTCCCCTTTTCCAGCCTACAGTATCTTTCACGCAGCAATTCACTAGAAATGAGAAGTACGTTATTGCAAAA--TTCTCATCTTCCCATGACCCCCATAATCAGCTGGACTGGGTTCACCCTGAGATGTCCACATATCCTGGCC-AAATTTCACATCAGTATTTACAAATTGCCAGAATAAATTGTAAGTTGCTATGC-------TACTAGAATCAGACTGAGCAACAAGATACAGCCTGACACGGGGCACAAATGGAGCCACAGGCACCAGAAAGGAAGTCGAGTCTTGTGTGATAAAATTCATCTTCATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45308549 407 + 49145316 AAAAAGAAACAATTCTATCAGTGCATCTCCAAGGACTTATGAATCCAGGGCAGGCACAGCTGCTCCTGGATCC-TTGGGTTCCCCAGATGGAAGCAGAGAAGCAGCAGCCTTGCCTTGTCCCTTCAGTTC---------------------ATTTTTCAAGCAACACTTTGCTCGAAATGAGAAGTACATTATTGTAAAA--TTCTCGTCTTCATATGA-CCCCATAACCAGCTGAATTGGGTTCCCCCCAAGATGTCCACATATCCCGGCC-AAATTTCACATCACTATTTACAAATTGCCAGAATACATTATAAATTACTATAT-------TGCTGGAATCAGACTGAACAACGGGATACAGCCTGAC-TGGGACATAAATGAAGCCACAGGCACCAGAAAGAAAGCCGGGTCTTGTGTGATAAAATTCATCTTCATTC i calJac3.chr22 C 0 I 327 s canFam3.chr1 19468933 385 - 122678785 CAAAAGCAGCAA-ACTCTCTGCACATCTCCAGGGACATAAGGAAACAGGATGGAAGCAGCTGTTCCCAGACTA-GTAGGACCCTCAATGGGAAGCAGAGAAACATCAGCC------------------TCTGGCTTCTTCC-----ACAGTGACTC----------ACTCACTAGAAATGAGAAGTAGACTATTACAAGACTTTTCCGCTTTCATACGG-CCCCATAACCTGCTGATCTGAGTTCACCCTGAGATGTCCACATTTCCTGGCC-AAATTTCATATCACTCCTTACAAACTGCCAGAGTAAATTACAAAGTCTCAGGTGTTGATGTAAAGGAATCAGGCTGAGCAGTGGGACACAGCTTGACACGGGGTGTAAATGAAGTCACCGTCACCAGAGAGGAGGCCTGGCCTTGTGTG------------------- i canFam3.chr1 I 49 C 0 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=158849.000000 s hg38.chr19_GL949753v2_alt 22384 110 + 796479 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattttattta s panTro4.chr19 58959100 105 + 63644993 TCTACATTGCGATTGAACATAGAGTCGTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATCATACCTGTGCTTACAGATAtt-ttacttttattt-----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825544 110 + 60714840 TCTACATAGCGATTGAACATAGGGTCCTTTTCTAGTGTGTTTTAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592232 110 - 106955855 TCTACCTAGCGATTGAACATAGGGTCCTTTTCTGGTGTGTTTGAGGCATATACATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttacttttattttatttc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020107 106 + 51301725 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTCAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTtaaagatatt-ttacttttattt----ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733108 106 + 50890351 TCTACAGAGCAATTGAATATAGGGTCCTTTTCTGGTGTGTTTAAGGCATATAAATACAGGCTGGGGACATTATACCTGTGCTTAAAGATAtt-ttactgttattt----ta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309283 91 + 49145316 TCTACATAGCAGTTGAATATAGGGTCCTTTTCTTGTGTGTTTGAGGTATATAAATACAGGATGGGGACGTTATACCTGTGCTTAAAGATAt-------------------- i calJac3.chr22 I 327 C 0 s canFam3.chr1 19469318 64 - 122678785 -----------------CATGG---------------------AGACATCCGGATATGGGCCTGGGACATCATATCTGGGCTGAAAGACTTTATTCCGTTCA--------- i canFam3.chr1 C 0 I 25 e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=230459.000000 s hg38.chr19_GL949753v2_alt 22494 133 + 796479 tttactgaaacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacagttcactg-aagcctcaacctcctgggcgcaaacgatctttctgcctgagcctcccaagtagctgggactacaggt s panTro4.chr19 58959205 133 + 63644993 tttactgagatagggtctcgctttgtcacccaggctggagtgctgtggtgcaatcacagttcactg-aagcctcaacctcctgggtgcaaacggtcttcctgcctgagcctcccaagtagctgggactacaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825654 133 + 60714840 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcgcaatcacggttcactg-aagcctcaacctcctgggctcaaatgatcttcctgcctgagcctcccaagtagctgggactacaggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592342 133 - 106955855 tttactgagacagggtctcgctctgtcacccaggctggagtgctgtggcacaatcacagtttactg-aagcctcaacctcctgggctcaaacgatcttcctgcctgagcctcccaagcagctgggactgcaggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47020213 133 + 51301725 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtgacacaatcacagttcactg-aagcctcaacctcctgggctcaaatggtcttcctgcctgagcctcccaagcagctgggactaaaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733214 133 + 50890351 tttattgagacagggtctcgctctgtcactcaggctggagtgctgtggcacaatcacagttcactg-aagcctcaacctcgtgggctcaaacgatcttcctgcctaagcctcccaagtagctgggactaaaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309374 129 + 49145316 -----tgaaacaaggtctcaccctgtcacccaggctggagtgcagtggtgcaatcacagctcactgaaagcctcaaactcctgggctcaaatgatcttcctgcctcagcctcccaagcagctgggactacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59881811 0 + 64156825 C a score=478268.000000 s hg38.chr19_GL949753v2_alt 22627 200 + 796479 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatcttaccaagttgtccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC s panTro4.chr19 58959338 198 + 63644993 gcacaccaccacgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgtccaggctagtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctggtatta--gacgtgagccactgcgccgggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825787 200 + 60714840 gcacactaccatgcctggctaatttttgtattttttgtagagatgggatctcaccaggttgcccaggctggtcttgaacccctgggcacaagtgatcctcctgcctcatcttcccaaagtcctgggattacagatgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAAtagtgatgatacaaatttgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592475 200 - 106955855 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcacccagttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccaaagtcctgggattacagacgtgagccactgcgcccggcAAAGATATTTTATTCTGTTTAGAATTGTGATGATACAAATTTGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59881811 200 + 64156825 gcacaccaccatgcctggctaatttttgtattttttgtagagatgggatctcactaggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacccggcAAAGATATTTTATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020346 200 + 51301725 gcacaccaccatgcctggctaattttggtattttttgtagagatggggtctcaccaggttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgcctcatcttcccgaagtcctgggattacagacgtgagccactgcacccggcaaagatattttattctgtttggaaTTGTGATGATACAAATTtgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733347 200 + 50890351 gcacaccaccatgcctggctaatttttgtattttttatagagatgggatctcactgggttgccctggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcctgaagtcctgggattacagacgtgagccactgcacctggcAAAGAAATTTCATTCTGTTTAGAATTGTGGTGATACAAATTTGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309503 200 + 49145316 ccacaccagcatgcctggccaatttttgtgttttttgtagagatgggatcttaccaggttgcccaggctggtcttgaacccctgggctcaagtgatcctcctgcctcatcttcccacagtcctgggattacagacatgagccattgtgcccagccGAGATATTTTATTCTGTTTAGGATTGTGATGATACAAATTTGAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19469382 25 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=920567.000000 s hg38.chr19_GL949753v2_alt 22827 323 + 796479 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatactcaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcgctttagccaagaggtgcagacaacacaaatgt s panTro4.chr19 58959536 323 + 63644993 TCAAAAAGTACATTTTAAGAAATTATATA-atacccactggaatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattgtaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcgcggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55825987 323 + 60714840 tcaaaaaatacattttaagaaattatata-atacccactgggatggctataattt-aaaaaaggaaaagtaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaa----tataacatgatacagccacaatgg-aaaatgatttggcagctcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcacggagacaaacagatactcctaccacagtgttcc-agcaccattactcactttagctaagaggtacagacaacacaaatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592675 323 - 106955855 TCAAAAAATACATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacgtatattactggaaggaa----gataacatgatacagccacaatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagtggggaggcaaacagatactcctaccactgtgttcc-agcaccattattcactttagccaagaggtgcagacaacacaaatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882011 323 + 64156825 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgagacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcctaccacaatgttca-agcaccattactcactttagccaagaggtgcagacaacacaaatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020546 323 + 51301725 tcaaaaaataaattttaagaaattatata-atACCCACTGggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatatTGGAACCCACATAGATTACTGGAAGGAA----TATAACATGATACAGCCATAATGG-AAAAtgatttggcagttcctcaaaaagttgaaCATAATAGTCACCATATGTCCTAGCAAATCCACTTCTAGGTACATACCCAAGATAATTTACAGCAGGGAGGCAAACAGATACTCCTACCACAGTGTTCA-AGCACCATTACTCACTTTAGCCAAGAGGTGCagacaacacaaatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733547 323 + 50890351 TCAAAAAATAAATTTTAAGAAATTATATA-atacccactgggatggctataattt-aaaaaaagaaaagtaagtgttgacaaggatgtggagatattggaacccacatagattactggaaggaa----tataacatgatacagccataatgg-aaaatgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaaatccacttctaggtacatacccaagataatttacagcagggaggcaaacagatactcccaccacagtgttca-agcaccattactcactttagccaagaggtacagacaacacaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45309703 326 + 49145316 TCAaaaactacatttaaagaaattatgta-atacccactgggatggctatcatttaaaaaaaagaaaaggaagtgttgacaaggatgtggagatattggaacccacatatattactggaaggaatgactataacatgatacagccacaatgg-aagacgatttggcagttcctcaaaaagttgaacataatagtcaccatatgtcctagcaattccacttctaggtacatacccaagataatttaaagcggggaggcaaacagatactcctgcca--gtgttca-agcaccattactcactgtagccaagaggtacagagaacacaaatgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469407 325 - 122678785 TCAGAAAGTACATCTTCAGAAATTATATAcacacccactaggatgtctataataa-aataaaagggaaataagtgttggcaaggacgtggagatattggaaccctcatgtattactggtgggaa----tgtaaaatgttggggccacattggaaaaacaatttggcagtttctcaaaaagttaaacatag-agttaccatatgtctcagcaattctacttctaggtagatatccaagaaaactggaagcagggactcaaacaggtacttgcacactgatgctcagagcactattacttgccctacctgaaaggtatgaacactctagatgt i canFam3.chr1 I 25 I 12 e macFas5.chr19 54882420 20327 + 59248254 M a score=878187.000000 s hg38.chr19_GL949753v2_alt 23150 438 + 796479 ccatcaaaagaagaacggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggttaaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaacaa-----aaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacagacaaactttgaaaacattatg s panTro4.chr19 58959859 443 + 63644993 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcgcctgtaggtccagctactcaggaggctgaggcaaaagaatcacttaaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactctgtctcaaaaaaaaaacaaaaaaacaaaaacaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacaatgcttttcaccatgacaagaaattaaacattgatgcatgctacagtacggacaaactttgaaaacattatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826310 449 + 60714840 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttcaagaccagcctagccaacatggtgaaaccccctctctactaaaaatacacaaattagctaggcatggtgacgggcacctgtagttccagctactcaggaggctgagacagaagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaacaaaagaaaaaaacaaagaaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacattgatgcatgctacagtacggataaactttgaaaacattatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102592998 430 - 106955855 ccatcaaaggaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaactccctctctactaaaaatacacaaattagctgggcatggtgacgggtgcctgtagttccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgcagtgagttgagattgtgccactgcactccagcctgggcaacagagcaagactccatctcaaaaaaaaaa-------------aaaaaaa------aaagaatggataagcaa------aatgtggtctatccatacaatacgatgcttttcaccatgacaagaaatgaaacactgatgcatgctacagtacggataaacttcgaaaacattatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882334 425 + 64156825 ccatcaaaagaagaatgaggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccaaggcaagtggatcacttgaggtcaggagtttgagaccagtctgaccaacatggtgaaaccccttctctact-aaaatacaaaaattagttgggcatggtggcgggcgcctgtagttccagctactcaggaggatgaggcagaagaatcatttgaacctaggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagcaagactccatctcaaagaaaaaa----------------aaaa------ag-gaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtatggataaactttgaaaacatcacg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47020869 328 + 51301725 ccatcaaaagaagaatggggccaggcacagtagctcaagtctgtaatcccagcactttgggaagctgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaattagttgggcatggtggcgggcgcctgtagtcccagctactcaagaggatgaggcagaagaatcccttgaacctgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaa----------------aaaa------aa---------------------------------------------------------------------------------------------------------gaaaacatcatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46733870 427 + 50890351 ccatcaaaagaagaatggggccaggcgcagtagctcaagtctgtaatcccagcactttgggaagccgaggcaagtggatcacttgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccttctctactaaaaatacaaaaatgagttgggcatggtggcgggcgcctgtagttccaactactcaggaggatgaggcagaagaatcacttgaacccgggaggcggaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagcaagactccatctcaaagaaaaaa----------------aaaa------aaagaatggataagcaa------aatgtggtctgtccatacagtatgatgcttttcaccatgacaagaaatgaaacattgatacatgctatagtacggataaactttgaaaacatcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310029 431 + 49145316 ccatcaaaaaaagaatggggccaggtgcggtag--cacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgcggtcaagagttcaagaccagcctggccaacatggggaaaccccgtctctactaa--------aaattagccaggcatggtggcgcatgcctgtacttccagctactcaggaggctgaggcaggagaacagcctgaatctgggaggaagaggttgcagtgggccgagatcgtgccactgcactgcagcctgagccacagagcaagacttcatctcaaaaaagaaa--------aaaaaaaaaaaa------aaggaatgaataagcaaatgtggaatgtggtctatccatacaatgagatgcttttcaccatgacaggaaatgaaacattgatacatgctacagtacagataaactttgaaagcattatg i calJac3.chr22 C 0 I 288 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=280190.000000 s hg38.chr19_GL949753v2_alt 23588 130 + 796479 ctaaagagaaagga----------gct--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg s panTro4.chr19 58960302 130 + 63644993 ctaaagagaaagga----------gct--agtcacaaaggatcgcatagtgtatgaatccacttacacaaaatgttcagaatagacaaaatcatagacacagagaagcatatgaatggttggaagggcctggtgggaaagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826759 142 + 60714840 ctaaagagaaatgctaaacattatgctaaagtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacaaaattatagacacaaagaagcctatgaatggttggaagggcctgatgggaaagtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593428 130 - 106955855 ctaaagagaaagga----------act--agtcacaaaggatcacatagtgtatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaggcatatgaatggttggaagggcctggtgggaaagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59882759 130 + 64156825 ctaaagtgaaagga----------ggt--agtcacaaaggaccacatagtatatgaatccatttacacaaaatgtccagaatagacgaaatcatagacacaaagaagcatatgaatggttggcagggcctggtgggagagtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021197 129 + 51301725 cTAAAGTGAAAGGA----------GCT--AGTCACAAAGGACCACATAGTATATTAATCCA-CGacacaaaatgtccagaatagacaaaatcATAGACACAAAGAAGCATATGAATGGttggcagggcctggtgggagagtG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734297 125 + 50890351 ctaaagtgaaagga----------gct--agtcacaaaggaccac-----atatgaatccacttacacaaaatgtccagaatagacgaaatcatagacacaaagaagtatatgaatggttggcagggcctggtgggagagtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310748 130 + 49145316 ctaaagcaaaaaga----------gct--agtcagaaagaatcatgtagtgaatgaatccacttacacaaaatgtccagaatagatgaaaccatagacacaaagaagcatattaatggttggcagggtctggcgggagagtg i calJac3.chr22 I 288 C 0 e canFam3.chr1 19469732 12 - 122678785 I e macFas5.chr19 54882420 20327 + 59248254 M a score=809384.000000 s hg38.chr19_GL949753v2_alt 23718 307 + 796479 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaagatacaaaatgccagtgaattggacac---tttacaagggtgaatttttggactgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCGTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT s panTro4.chr19 58960432 307 + 63644993 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcattaacatacaaaatgccagtgaattggacac---tttacgagggtgaatttttggactgtgaattatacatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTTGTTTTTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55826901 306 + 60714840 ggaaatgaggagtgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatgattatactacct-atgaatatacgaaatgccagtgaattgtatac---tttacaagggtgaatttttggaacgtgaattatatatcaataaaAAAAGAAAGAAAATAAATGATACAAGAGCTCAAAATAGAAAAGCTTCTCTTCCTCCTCCC--CTTCAAACC-TCACTAGATCTCCCACCTTGTTTCTGATACTTCTATGCTCCTCTCTCC-CGTTAGA-TTTCATATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593558 310 - 106955855 ggaaatgaggaatgactgctt---aatgggtacaagattttcttttagggtgatgagaatgttctggaattatgtagtggtgatggttatactacctcatgaatatacaaaatgccagtgaattgtatac---tttacaagggtgaatttttggagtgtgaatAATATATTaatagaaaaagaaagaaaataaatgatacaagagctcagaatagaaaagCTTCTCTTCCTCCTCCT--CCTAACACCTTCACTAGATCTCCCACCTTGTTTCTGACACTTCTGTGTTCCTCTCTCCTTGTTAGATTTTCCTATCTTT i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 59882889 307 + 64156825 ggaaatgaggagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgcacac---tttacaagggtgaatttttggaatgtgaattatatatcaataaaAAAAGAAGGAAAATAAATGACACAAGAGCTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTGTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021326 307 + 51301725 GGAAATGaagagtgactgctt---aatgggtacaagATTTTCTTTCAGGGTGATGAGAATGGTCTGGAATTAtgtagtggtgatggttatactACCTTGTGAATATACAAAATGCCAGTGAATTGCACAC---TTCACAAGGGTGAATTTTTGGAatgtgaattatatatcaataaaaaaagaaggaaaataaatgacacaAGAGCTCAAAATAGAAaagtttctcttcctcctccc--cctcacaCC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTATTCCTCTCTCC-CGTTAGA-TTTCACATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734422 300 + 50890351 ggaaat---gagtgactgctt---aatgggtacaagattttctttcagggtgatgagaatggtctggaattatgtagtggtgatggttatactaccttgtgaatatacaaaatgccagtgaattgtacac---tttacaagggtgaatttttggaatgcgaattatatatcaataaaAAAA----GAAAATAAATGACACAAGAACTCAAAATAGAAAAGTTTCTCTTCCTCCTCCC--CCTCACACC-TCACTAGATCTCCCACCTCCTTTCTGATACTTCTGTGTTCCTCTCTCC-CATTAGA-TTTCATATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45310878 309 + 49145316 ggaaatggggagtgactgcttctcagtgggtacaagatttcattttagggtgatgaggatgttctggaattatgtggtggtgatggttatactacctcgtgaatatccg-aatgctagtgaattgtacac---tttacaagggtgaatttttggaatgtgaattatatatccataaaAAAAGAAAGAAAACAAAAGATACAAGAGCTCAAAATAGAAAAACTTCTCTTTCTCCTCCC--TCTTACACC-TCACTAGATCTCCCTCCTTATTTCTGATAATTCCATGTTTCTCTCTTC-TGTTAGA-CTTCGTGTCTTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19469744 310 - 122678785 gggaatggggagaaactactt---acagggtaggagatttcatttgggggtgataaaagtgttctggaattacatagtggtgacagttgcataaacttgtt-atatactaaatgccactgaattgtacacttatttaaaagggtaaatttatggaatgtgaattatgagtcaata-aaAAAGAAAGAAAATAAATAATGCAAGAGCTAAAAACATGAATGCACTTCTTCCTCTTCCCTGTCTCACACA-GCACTAGACTTCCTGCCTTATTTCAGATACGTCCATGCTCCTTGACTC-TGTCAGA-TTTCAGGTCTCT i canFam3.chr1 I 12 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=426973.000000 s hg38.chr19_GL949753v2_alt 24025 212 + 796479 CTCAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTGAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT s panTro4.chr19 58960739 212 + 63644993 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCGTAGTGCTAGGGTAGCAGACATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827207 212 + 60714840 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCATAGTGCTGGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAG-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTTAAAAACCGGTTATACCAGCACAGACTGCTAGCAACAACCTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59883196 211 + 64156825 CTTAGAAAACATTCCTGACGTG-ATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTAGTATCATGGAATAAAAACATTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAAGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021633 212 + 51301725 CTTAGAAAACGTTCCTGACGTGAATTGTGTTCACAGTCCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCAtggaataaaaacatttcaaa-------tagttATCTTGCAAGAACACTTCGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAACTTTGGCTCTTTGGAGTAGGTTGCAGGAAGATTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734722 212 + 50890351 CTTAGAAAACGTTCCTGATGTGAATTGTGTTCACAGTGCTAGGGTAGCAGTCATTTCCCAAGCCTACTATCATGGAATAAAAACGTTTCAAA-------TAGTTATCTTGCAAGAACACTTTGGAGGATACCTTTTCAAAAACCGATTATACCAGCACAGACTGCTAGCAACAACTTTCAGCAAATTTGGCTCTTCGGAGTAGGTTGCAGGAAGATTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311187 194 + 49145316 CTTAGAAAATGTTCCTGGCATGAATTGTGTTCATAGTGCTA-GGTAGTAGTCACTTTCCAAACCTACTATCATGGAATAAAAACGTTTCAAG-------TAG-----------------TTTGGAGGATACCTTTTTAAAACCCAATTATACCAGCACAGACTGCTAACAGCAACCTTCAGCAACTTCGGCTCTTTGGAGTAGGTTGTAGGAACATTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470054 201 - 122678785 CCAAGAAAACATTCCTGGTGTGAATTATGTTCATAAAGGTGAAGTAGAAATCATTTCCCAAGTCTGCTAATACTGAATAAAAACATTTTCAAAGGCTATTACTTATTTTGCAAGGACATTTTGGGAGATACCTTTGAAAAAA------------------ACTGGTTATGACAGCCTTGAACAATTTTGGCTCTTTGGAGTGGATTACAGGGAGGTTAT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102593868 100 - 106955855 M e macFas5.chr19 54882420 20327 + 59248254 M a score=331149.000000 s hg38.chr19_GL949753v2_alt 24237 114 + 796479 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGTTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC s panTro4.chr19 58960951 114 + 63644993 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827419 114 + 60714840 GACCTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102593972 112 - 106955855 GACTTGCTGAAAGGAAGGATGA-TAAGCATCTAGATGCCAATTTATATTCTGCATTTGG-CCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCAAATGCTGCCAAAAGCTCTAAC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 59883407 114 + 64156825 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAGCTCTAAC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47021845 114 + 51301725 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCCGAATGCTGCCAAAAgctctaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46734934 114 + 50890351 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGCCAATTTATATTCTGAATTTGGCCCTTAAAGTCTGGATGAGCTTCTGTTTCAGCTGAATGCTGCCAAAAGCTCTAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45311381 114 + 49145316 GACTTGCTGAAAGGAAGGATGATTAAGCATCTAGATGGCAATTTATATTCTGCATTTGGCCCTTAAAGTCTGGATGAGCTCCTGTTTCAGCCGAATACTGCCGAAATCCTTAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470255 114 - 122678785 GAGTTGCAGAAATTAAGGATGAGTAAGCAACTAGATGCCAACTTATGTTATATATTTGGCCATTAAAATCTGGATGAGCTCCCATTTTCATCCAAAGATGCCAAAAGCTCTAAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54882420 20327 + 59248254 M a score=37319.000000 s hg38.chr19_GL949753v2_alt 24351 31 + 796479 -tttttaatttttttttttttttttttttttt s panTro4.chr19 58961065 26 + 63644993 -ttttt-----ttatttatttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827533 26 + 60714840 -ttttt-----ttaatttttttttttcttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594084 26 - 106955855 -ttttt-----ttaatttttttttttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883521 27 + 64156825 tttttt-----ttaattttttttttttttttt i rheMac3.chr19 C 0 I 132 s papAnu2.chr19 47021959 27 + 51301725 tttttt-----ttaattttttttttttttttt i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46735048 22 + 50890351 -----T-----TTAAttttttttttttttttt i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45311495 23 + 49145316 -TTAAA-----AAAAtttttttttttttt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=193738.000000 s hg38.chr19_GL949753v2_alt 24382 151 + 796479 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcccagcaaat s panTro4.chr19 58961091 151 + 63644993 g-----gagacagagtctcactctgttgcccaggctggagggcagtggtgtaatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccataatgcccagcaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827559 151 + 60714840 g-----gagacagagtctcactctgttgcccaggctggagtgcagtggtataatctcgactcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcgcccaccacaatgcctggcaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594110 151 - 106955855 g-----gagacagagtctcactctgttgcccagactggagtgcagtggtgtaatctcagctcactgaaacctctgcctcccaggttcaagcaattctcctgcctcagtcacttgagtagctgggaatacaggcacccaccacaatgcccggcaaag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47021993 121 + 51301725 -tttttgagacagagtctca----------------------------------ctcggctcactgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctgggagtacaggcgcccaccacaatgcctggcaaat i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 46735076 116 + 50890351 ------gagacagagtctta----------------------------------ctcggctggctgcaacctctacctcccaggttcaagcaattctcctgcttcagtcacttgagtagctaggaatacaggcgcccaccacaatgcctggcaaat i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45311518 132 + 49145316 -------agagacaatctcactctgttgcccaggctggagggcagtggtgccatctcagctcactgcaacctccacctcccagattca---aattctcctgcctcagcctcctgagtagctgggattacag----------taatggct---aaa- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59883548 132 + 64156825 I a score=276355.000000 s hg38.chr19_GL949753v2_alt 24533 127 + 796479 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacagatgtgagccacctcgcc s panTro4.chr19 58961242 127 + 63644993 ttttgtatttttagtagagacagggtttcaccatgttgcccaggctggtttcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccacctcgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827710 127 + 60714840 ttttgtatttttagtagagacagggtttcaccatcttgcccaggctggtctcgaactcctgacctcaggtgatccacccacctcagccgcccaaagtgctgggattacaggcgtgagccacctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594261 98 - 106955855 ttttgtatttttagtagagac-----------------------------tcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggaatacaggtgtgagccacctcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883680 127 + 64156825 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccaccgcacc i rheMac3.chr19 I 132 C 0 s papAnu2.chr19 47022114 127 + 51301725 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggttatctgcccacctcggcctcccaaagtgctgggattataggcgtgagccacctcacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735192 127 + 50890351 ttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccacctcgcc i chlSab2.chr6 C 0 I 352 s calJac3.chr22 45311650 127 + 49145316 ttttgaatgtttagtagagatggggtttcaccatgttgaccaggctcgtctcaaactcctgacctcaagtgatccgcccgccttggcctccaaaagtgctgggattacacgcgtgagccactgcgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e macFas5.chr19 54882420 20327 + 59248254 M a score=23961.000000 s hg38.chr19_GL949753v2_alt 24660 18 + 796479 tggccCAAAAGCTCTAAT s panTro4.chr19 58961369 18 + 63644993 tggccCAAAAGCTCTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827837 18 + 60714840 tggccCCAAAGCTCTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594359 18 - 106955855 tggccCAAAAGCTCTAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883807 14 + 64156825 ----TCGGGAGCTCTAAT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022241 14 + 51301725 ----tcgGGAGCTCTAAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311777 18 + 49145316 cggccCAAAAGCTCTAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470369 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90187.000000 s hg38.chr19_GL949753v2_alt 24678 40 + 796479 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT s panTro4.chr19 58961387 40 + 63644993 TTTTATGAGAAACTCTGAGGACAGAATCTTAGTCAATTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827855 40 + 60714840 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594377 40 - 106955855 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883821 40 + 64156825 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022255 40 + 51301725 TTTTATGAGAACCTCTGAGGACAGAATCTTAGTCAATTGT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45311795 40 + 49145316 TTTTATGACAACCTCTGAGGACAGAGTCTTAGTCAAttgt i calJac3.chr22 C 0 I 299 s canFam3.chr1 19470369 40 - 122678785 TTTTACAAGCATCTCCCAGGATAGAATCTTAGTCAATTCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=77243.000000 s hg38.chr19_GL949753v2_alt 24718 43 + 796479 TAATGAATAAGCAACATTA-GAAAAA-AAATTCAATATTCACCTA s panTro4.chr19 58961427 43 + 63644993 TAATGAATAAGCAACATTA-GAAAAA-AAACTCAATTTTCACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827895 44 + 60714840 TAATGAATAATCAACATTAGGAAAAA-AAATTCAATATTCACCTA i ponAbe2.chr19 C 0 I 35 s nomLeu3.chr10 102594417 44 - 106955855 TAATGAATAAGCAACATTAGGGGAAA-AAATTCAATATTCACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883861 44 + 64156825 TAATGAATAAGCAACATTAGGGGGAA-AAATTCAATATTCACCTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022295 44 + 51301725 TAATGAATAAGCAATATTAGGGGAAA-AAATTCAATATTCACCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312134 45 + 49145316 TAATGAATAAGCAACATCAGGAAAAATGCATTCAATATTCACCCT i calJac3.chr22 I 299 I 1 s canFam3.chr1 19470409 44 - 122678785 TCATTGAAAAGCAACACCAGAGAAAA-TAACTTAATATTCACCAG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18731.000000 s hg38.chr19_GL949753v2_alt 24761 13 + 796479 TTTTTGAGAATTT s panTro4.chr19 58961470 13 + 63644993 TTTTTGAGAATTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594461 13 - 106955855 TGTTTGAGAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883905 13 + 64156825 TGGTTGAGAATTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022339 13 + 51301725 TGGTTGAGAATTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312180 13 + 49145316 TTTTTGAGAATTT i calJac3.chr22 I 1 I 422 s canFam3.chr1 19470453 13 - 122678785 TTTTTTAGAACTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=12195.000000 s hg38.chr19_GL949753v2_alt 24774 10 + 796479 TAGAGTTATA s panTro4.chr19 58961483 10 + 63644993 TAGAGTTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594474 10 - 106955855 TAGAGTTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883918 10 + 64156825 TAGAGTTATA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022352 10 + 51301725 TAGAGTTATA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470466 10 - 122678785 TAAAGTTTTA i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=910.000000 s hg38.chr19_GL949753v2_alt 24784 1 + 796479 A s panTro4.chr19 58961493 1 + 63644993 A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594484 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883928 1 + 64156825 A i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022362 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470476 1 - 122678785 I e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=196807.000000 s hg38.chr19_GL949753v2_alt 24785 193 + 796479 CAAACTCTTGATTATATATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT s panTro4.chr19 58961494 193 + 63644993 CAAACTCTTGATTATATATATTCCCGAAGTACCTACTCTGCATAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACTGAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCATGTCATATGGCAAACAACGCACTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCGGAAGCACTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594485 194 - 106955855 CAAACTCTTGATTATACATATTCCCAAAGTAGCTACTCTGCGTAGGTCCCC------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAATTTTTCATCATGTCATATGGCAAACAACGCCCTCTGTGCTGTTTTACACACCAGCTTCTTCAGAACCCAGAAGCACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59883929 191 + 64156825 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACAACGCACTC--TGCTGTTTTACACACCAACTTCTTCAGAAACTGGAAGCACTTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022363 193 + 51301725 CAAACTCTTGATTATACATATTCCTGAAGTACCTACTCTGCGTAGGT-CCT------GGTCCTACTCCCCAAATGGGTCACCCAAAAATTCACCCCCATTATTCCCCAAATCCCACCCTAGTTTTTCATCACGTAATATGGCAAACGATGCACTCTGTGCTGTTTTACACGCCAACTTCTTCAGAAACCGGAAGCACTTG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19470477 194 - 122678785 CACATTCTTGATCAGACACATTCCCAAAGCACCTGGGCTCCATGGCT-CCTCCATGGGGT----CTGCCCAAACCAGACAAC-ACAATCTCATCCCCATTCTTCACAAAACTCCACCATCGTTTTTCATTATGTAAAATGATAAATGACGCATCTGTAGCTGTTTTACTCATCAGCTTTTCCTGAACCCAGGAGGAGCTT i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e calJac3.chr22 45312193 422 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=26254.000000 s hg38.chr19_GL949753v2_alt 24978 28 + 796479 AGAGGTTATCTCCCCTCATCCTCCACCC s panTro4.chr19 58961687 28 + 63644993 AGAGGTTATCTCCCCTCATCCTCCACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102594679 28 - 106955855 AGAGGTTATCTCCCCTCATCCCCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884120 28 + 64156825 AGAGGTTATCTCCCCTCATGCCCCACCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022556 28 + 51301725 AGAGGTTATCTCCCCTCATGCCCTACCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312615 20 + 49145316 agaaGTTACCTCCC--------CAACCC i calJac3.chr22 I 422 C 0 s canFam3.chr1 19470671 12 - 122678785 AGCGGTCATCTG---------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55827939 35 + 60714840 I e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=90076.000000 s hg38.chr19_GL949753v2_alt 25006 46 + 796479 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT s panTro4.chr19 58961715 46 + 63644993 CGCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55827974 46 + 60714840 CCCAAAACCCAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i ponAbe2.chr19 I 35 C 0 s nomLeu3.chr10 102594707 45 - 106955855 -TCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGGCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884148 46 + 64156825 CCGAAAACACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47022584 44 + 51301725 CCGAAA--ACAGCAGTTTCCCCAATAACATTGAGAAAATGGCCATT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45312635 46 + 49145316 CCCAAAACACAGCAGTTTCCCCAATAACATTGAGAAAGTGGGCATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470683 46 - 122678785 CCAGAAAGGCAGTCATTCTCCCAATCACATTGAAAAAACAGGCATC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=241347.000000 s hg38.chr19_GL949753v2_alt 25052 137 + 796479 AAAG---TTCTTCTAggccgggtgcggtggctcatgcctgtaatcccaacactttgagaggccgaggcgggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa s panTro4.chr19 58961761 137 + 63644993 AAAG---TTCTTCTAggccgggtgcggtggctcacgcctgtaatcccaacactttgagaggccgaggcggggaaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828020 137 + 60714840 AAAG---TTTTTTTAggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgaggagggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594752 140 - 106955855 AAAGTTCTTCTTCTAggccgggtgtggtggctcacgcctgtaatcccaacactttgagaggccgaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaaccccatctctactaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884194 140 + 64156825 AAAGTTCTTCTTGTAggccgggtgcggtggctcacacctgtaatcccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctactaaaaa i rheMac3.chr19 C 0 M 85 s papAnu2.chr19 47022628 140 + 51301725 AAAGTTCTTcttgtaggccgggtgcggtggctcacacctgtaaccccaacattttgagaggccaaggcaggggaattgcttgaggtcaggagtttgataccagcctggccaacatggtgaaactccatctctacttaaaa i papAnu2.chr19 C 0 I 4 s calJac3.chr22 45312681 140 + 49145316 AAAGTTCTTCTTGTGggccgggtgcagtggcttgcgcccataatcccaacgcttttagaggctgaggtgggggaattggttgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctttactaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M a score=-1219.000000 s hg38.chr19_GL949753v2_alt 25189 13 + 796479 caaaaaac------------------------------------------------------------aaaaa- s panTro4.chr19 58961898 13 + 63644993 caaaaaac------------------------------------------------------------aaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828157 13 + 60714840 caaaaaac------------------------------------------------------------aaaaa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594892 12 - 106955855 caaaaaa-------------------------------------------------------------aaaaa- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022772 73 + 51301725 aaaaaaatgagctgggtttagtggtgggttcctgtaatcccagttattcaggaggaatatctctactaaaaat- i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45312821 13 + 49145316 -aaaaaaa------------------------------------------------------------aAAAAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=135799.000000 s hg38.chr19_GL949753v2_alt 25202 175 + 796479 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT s panTro4.chr19 58961911 175 + 63644993 acaaaactgagctggatatggtggtggatgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccaccctgggggacagaacaagactctttctcaaaa-aaataaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828170 175 + 60714840 acgaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccaaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgcgccacttcatgccagcctgggggacagaacaagagtctgtctcaaaa-aaataaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102594904 173 - 106955855 acaaaactgagctggatatggtggtgggtgcctgtaatcccagctattcgggaggccgaggcaggagaattgcttgaacccagaacccaggaagtggaggttgcagtgagctgagattgtgccacttcacgccagcctgggggacagaacgaga--ctgtctcaaaa-aaataaaT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47022845 169 + 51301725 acaaaaattagctgggcatggtggtgtgtgcctgtagtcccagctactcgggaggctaaggcaggagaatcgcct-------gaacccgggaggcaaaggttgcagtgagcaaaggtcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45312834 0 + 49145316 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=1365.000000 s hg38.chr19_GL949753v2_alt 25377 1 + 796479 A s panTro4.chr19 58962086 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828345 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595077 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47023014 1 + 51301725 a i papAnu2.chr19 C 0 I 502 s calJac3.chr22 45312834 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=165198.000000 s hg38.chr19_GL949753v2_alt 25378 229 + 796479 ggccgtgtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggtgcgtgcctgtagtcccagctattcgggaggctgaggcaggaaaattgcttgaatc-------cgggaggcgaaggttgcagtgagct s panTro4.chr19 58962087 229 + 63644993 ggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--aaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctaccaaaaatacaaaaattagctgggtgtggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaaggttgcagtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828346 229 + 60714840 ggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtcccacatgcctgtagtcccagctactccggaggctgaggcaggagaattgcttgaatc-------cgggaggcgaagtttgcagtgagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595078 229 - 106955855 ggccgggtgcagtggctcacacctgtattcccagcactttgggaggctgaggtgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcacacacctgtagtcccagctacttgggaggctgagtcaggagaattgcttgaacc-------tgggaggcgaaggttgcagtgagct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45312835 228 + 49145316 ATccaggtatagtggctcatgcctgtaattccagc-cttcaagaggattc-----ccaaatcaccagaggttggga-ttcaagaccaccctgagcaacatggagaaaccccatctctattaaaaatac-aaaattaaccaggcagggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaacacagaaggcggaggttgtagtgag-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M e rheMac3.chr19 59884334 85 + 64156825 M a score=51799.000000 s hg38.chr19_GL949753v2_alt 25607 46 + 796479 gagattgcgccactgtactccagccttggtgacaaagcgagactct s panTro4.chr19 58962316 46 + 63644993 gagattgcgccactgtactccagccttggtgacaaagtgagactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828575 46 + 60714840 gagattgtgccactgtactccagcctgggtgacaaagcgagaccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595307 46 - 106955855 gagattgcaccactgcactccagcctgggtgacaaagcgagactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884420 46 + 64156825 gagactgcaccactgcactccagcctgggtgacagagcgagtctcc i rheMac3.chr19 M 85 C 0 s calJac3.chr22 45313063 43 + 49145316 ---atcatgccacttcactccagcctgggtgacagagcgagactcn i calJac3.chr22 C 0 I 10 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=18590.000000 s hg38.chr19_GL949753v2_alt 25653 28 + 796479 atctcaaaaaacaaacaaacaaacaaac s panTro4.chr19 58962362 28 + 63644993 atctcaaaaaacaaacaaataaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828621 28 + 60714840 atctcgaaaaataaacaaacaaacaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595353 28 - 106955855 atctcaaaaaacaaacaaacaaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884466 24 + 64156825 atctcaaaaaataaataaataaat---- i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19470729 0 - 122678785 C e calJac3.chr22 45313106 10 + 49145316 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=6156.000000 s hg38.chr19_GL949753v2_alt 25681 12 + 796479 aaacaaa-TAAA------T s panTro4.chr19 58962390 14 + 63644993 aaataaa-taaa----aat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828649 18 + 60714840 aaataaa-TAAATAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595381 14 - 106955855 aaataaa-TAAA----AAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884490 9 + 64156825 -----aa-taaa----aat i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313116 15 + 49145316 aaTTAAATTCAA----AAT i calJac3.chr22 I 10 C 0 e canFam3.chr1 19470729 0 - 122678785 C e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=404591.000000 s hg38.chr19_GL949753v2_alt 25693 305 + 796479 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACATCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT s panTro4.chr19 58962404 305 + 63644993 aaaGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAAAACATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTGTTCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828667 301 + 60714840 AAAGTTCTCCTTGTGCACTTT-AAGCAAA-GGTGA---------TCATGAAGCAGATCTCATTGGGAAACACAT---CTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACACTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595395 313 - 106955855 AAATTTCTCCTTGTGCACTTT-AAGCAAA-GGTGATCCCCCATCTCATGAAGCAGATCTAATTGGGAAAAACATCTCCTTCCTAATTCTCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTACGCTAATCATACAG-GAACCTTGGGGACAGGAGTCCTCACGTCCTACTTATAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884499 311 + 64156825 aaAGTACTCC-TGTGCACTTT-AAGCAAA-GGTGATCCAGCGTCTTATGAAGCAGATCTAATTGGAAAAAA-ATCTCCTTTCTAATTATCTTA-CCTGTTTTCATTGAGGGAGCTT-CAAGTTCATCGTGTTTATCTAGAAAATAGGAGGGAAGAAAAGG-AATTATGCTAATCACATAG-GAACCTTGGGGGCAGGAGTCCTCTCGTCCTACTTACAGACTTCCTG-TCTTCTTTGGGAAGCAGAAAAGAGAATGGCTTCTCCATTCCCTAGGTGCTTCCTGAGTCCTCAGAGCATGGACAGAGCCTCAGATT-ACTCTT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313131 313 + 49145316 AAAGTCGTCGTGTCCCACCTTAAAGTAAATGGCGATCCTTGTACTTATGCAGCAGATCTAATCGGGAAATACAACTCCTTTCTAATCATCTTACCCTGTTTTCATCGAGGGAGCTTCCAATTTCATCGTGTTTATCTGGAAAACGGAAGGGAAGACAAGG-AATGAGGCTAATCATATGG-GACCATTGTGGGCAGGCGTCCTCACGTCCTCCTTACTGACTTCCTG-CCCTGTTTGGGAAGCAGAAAAGA-----GTTTCTCCATTCCCTAGATGCTCCCTGGGTCCTCAGACCGGGGACAGAGCCTCAGATTAACTCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19470729 307 - 122678785 AAGATTCCTTCTGTGCCTTTT-AATCACA-GGGGACTGCCTGCTGCATGAGGTAAATATAATTTGGAAAAACAT---CACTCAAATTATCTTA-CATTTTTTTGCTGCAGGAGCTC-CACGTCCATCATCGTTATCTAGGAAACAGGATGCAAGAAAAAATAATCACAATGATTGAGTGGAGAACCTTGGGCACTTAGGTCCTCATGTTCTTCTTATGGACTTTAGC-CCCTCTTTGGGAACT-----GGAGAATGTCTTTTCTACTCTTGGGATGTTCACTGGGTCCCCAAATCAGGGCCAGAATATTAGATA-GCTTTT i canFam3.chr1 C 0 I 2753 e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=25114.000000 s hg38.chr19_GL949753v2_alt 25998 20 + 796479 CTTAATAGTCCTGGAGTTTG s panTro4.chr19 58962709 20 + 63644993 CTTAATACTCCTGGAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828968 20 + 60714840 CTTAATACTCCTGGAGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595708 20 - 106955855 CCTAATACTCCTGGAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59884810 20 + 64156825 CCTAATACTCATGGAGTTTG i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45313444 20 + 49145316 CCTAATACTCCTGGAGTTTG i calJac3.chr22 C 0 I 604 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=293891.000000 s hg38.chr19_GL949753v2_alt 26018 266 + 796479 ATAGTATTTTTAATAACAAAAATATTTATGAATGACCCTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaagctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggactacaggcgcccgccaccac s panTro4.chr19 58962729 266 + 63644993 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttctttct-------------tttattttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctccc-aggttcaagagattctcctgcctcagccttccaagtagctgggataacaggtgcctgccaccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55828988 270 + 60714840 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--CCCCCTCCAGTTTGATTTCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CCCCATTCACCCAAAttctttctttct-------------ttttttttttttttttcagtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctccc-gggttcaagagattctcctgcctcagccttccaagtagctgggattacaggtgcctgccaccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102595728 262 - 106955855 ATAGTATTTTTAATAACAAAAATATTTATGAATGACACTGCTAACG--ACCCCTCCAGTTTGATTCCTTGCCAGTCTTCTCTATCTTGACAAAGAA---CACCATTCACCCAAAttctttcttttt-----------------ttttttttg----agtcttgcactgttacccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcct-gggttcaagagattctcctacctcagccttcaaagtagctgggattacaggtacctgccaccac i nomLeu3.chr10 C 0 I 1525 s rheMac3.chr19 59884830 259 + 64156825 CTAG------------------TATTTATGAATGACACTGCTAACG--CCCCCTCCAGTATGATTCCTTGCCAGTCGTCTTTATCTTGACAAAGAA---CGCCATTCACCCAAATTCTTTCtttctttc--tttcttttttttttttttttg----agtcttgcattgtcacccaggctggagtacagtgacatgatctcagcccacagcaacctccgcctcct-gggtttaagagattctcctgcctcagccttccaagtagctgggattacaggcacctgccaccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314068 289 + 49145316 ATAGTATTTTTAATAACAAAAATATTTATGTATGACCCTGCTAATGCCCCCCCTCCAGTTTGATTGCCTATTAGTCTTCTCTGTCTTGACAAAGAATACCACCATTCACCCAAATTCTTAtttttttttaatatcttttttgtttttttttaggacagtctcacactgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacttccaacttctggggttcaagcagttctcctaattcagcctcccaagtagctgggattacaggtaagtgccaccag i calJac3.chr22 I 604 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=3910.000000 s hg38.chr19_GL949753v2_alt 26284 4 + 796479 accc s panTro4.chr19 58962995 4 + 63644993 accc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829258 4 + 60714840 accc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885089 4 + 64156825 accc i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314357 4 + 49145316 accc i calJac3.chr22 C 0 I 308 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=108669.000000 s hg38.chr19_GL949753v2_alt 26288 128 + 796479 tgctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac s panTro4.chr19 58962999 128 + 63644993 tgctaatttttgtatttttggtagagacagggtttcaccatgttggccaggctggtctcaaactcctggccttaagtgatcaacctgccttggccactcagaatactgggattccaggcatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55829262 128 + 60714840 tgctaatttttgtatttttagtagagacggggtttcaccatgttggccagcctggtctcaaactcctggcctcaagtgatcaatctgccttggccactcagaatgctgggattccaggcatgagccac i ponAbe2.chr19 C 0 M 656 s rheMac3.chr19 59885093 128 + 64156825 tgctaatttttgtaattttagtagagacagagtttcaccatggtggccaggctggtctcaaactcctggcctcaagtgatcaacctgccttggccactcaaaatgctgggattccaggcatgagccac i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314669 128 + 49145316 tgctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttaaacttcaggcctcaagtgatcaacctgccttggtttcccaaagtgctgggattacaggcatgagccaa i calJac3.chr22 I 308 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=32277.000000 s hg38.chr19_GL949753v2_alt 26416 66 + 796479 tgcacctggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT s panTro4.chr19 58963127 66 + 63644993 tgcgcccggccTATATTTCTATCTCCACAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885221 66 + 64156825 tgcactcggccTATATTTCTATCTCCCCAGTGGCACCATTTAGTCTAAGTTAAAATATCACCTACT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45314797 66 + 49145316 tgcacctggccTGTATTTCTGTCTCACCAGTGGCACCACTTGGTCTGATTTAAAATATCACCTACT i calJac3.chr22 C 0 I 3697 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=37115.000000 s hg38.chr19_GL949753v2_alt 26482 156 + 796479 Tggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaagttagccgagcgtggtggcgggcc s panTro4.chr19 58963193 156 + 63644993 Tggccgggcgtggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaagttagccaagcgtggtggcgggcg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59885287 155 + 64156825 CAgccaggtacggtggctcaggcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtaaagagattgagaccatcctggataacatggtaaaaccctgtctctactaaaaatacaaaaa-ttagccaggcatggtggtgggcg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55829390 656 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=151114.000000 s hg38.chr19_GL949753v2_alt 26638 320 + 796479 cctgtagtcccagctactcgggaggctgaggcaggag-aatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgagggacagagccagactccgtctcaaaaaaaaaataaaaataaaaataaaa----atGAAATGAAatatcacctactcaccagtccctggcaaccaccagt--------tgcttctgtgagtttggcttttttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta s panTro4.chr19 58963349 332 + 63644993 cctgtagtcccagctactcgggaggctgaggcaggag-aatggtgtgaacccgggaggcagagcttgcagtgagctgagatcgcaccactgcactccagcctgagtgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaaTGAAATAAAATAAAatatcacctactcaccagtccctggtaaccaccagtatactctctgcttctgtgagtttggcttttttagactacgcatatgagtgagatcctgcagaatttgtctttctgagtccggcttattttgtttagcatgatatatgcggagatgttgatgaaagggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830049 329 + 60714840 cctgtagtcccag-tactctggaggctgaggcaggagaaatgcaatgaacttgtgagacagagcttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaataaataaataaaaataaaataaaat---ataaaatatcacctactcaccagtccctggcaaccaccagtatactctctgcttctgtgagtttgggtttcttagactacacatatgagtgagatcctgcagaatttgtctttctgagtctggcttattttgtttagcacgatatatggggacatgttgatgaaagggta i ponAbe2.chr19 M 656 C 0 s rheMac3.chr19 59885442 320 + 64156825 cctgtagtcccagctacttgggaggctgaggcaggag-aatggcgtgaacctgggaggccgagcttgcagtgagctgagatcgcaccactacactccagcctgggcgacagagcgagactccgtctcaaaataaataaataaataaaaataa-----------ataaaGTAtcacctactcaccagtccctggcaaccaccagtagactctctgcttctgtgagtttggctttttcaggccacacatgtgagtgagatcatgcagaatttgtctttctgagtctggcttattttgtttaacataatgtatggggagatGTTGATGAAA-GGTA i rheMac3.chr19 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I e chlSab2.chr6 46735319 352 + 50890351 I e papAnu2.chr19 47023015 502 + 51301725 I e macFas5.chr19 54882420 20327 + 59248254 M a score=8823.000000 s hg38.chr19_GL949753v2_alt 26958 5 + 796479 taagt s panTro4.chr19 58963681 5 + 63644993 taaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830378 5 + 60714840 taaat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59885762 5 + 64156825 TAAAT i rheMac3.chr19 C 0 I 311 s macFas5.chr19 54903304 5 + 59248254 TAAAT i macFas5.chr19 M 20327 C 0 s papAnu2.chr19 47023517 5 + 51301725 taaat i papAnu2.chr19 I 502 C 0 s chlSab2.chr6 46735671 5 + 50890351 TAAAT i chlSab2.chr6 I 352 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1854538.000000 s hg38.chr19_GL949753v2_alt 26963 1074 + 796479 ttccagttctaagatgaagaagttcaggtgctcagcatggtggcaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCGTATTGCCTGAAACGCACCAACTCTTACTACATCTAGTCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagatgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgattgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaa----gcagccagtgacccttccagcatataaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcattctagcatgaatcctacagctataaagaaccagatattgctatcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagcccttgttgacaccttgattgcatcctt s panTro4.chr19 58963686 1077 + 63644993 ttccagttctaagatgaagaagttcaggggctcagcatggtggcaatggatgtgctaattaatttgaccgtgataatcattacacaatgtacaggtggaacaaatcatcagattgtataccttgaatatatacaatcttcatttgtcaatttgatatttttaaatttaaaaaGTCATATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTACTTTCCAAAAGCAGCCAGAGgccgggcatgatggcctgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaaccgagtgggaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaagcagccagtgaccgttcaagcatataaatcaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tatgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgagactttgcttttgctgctctctc-ccctggagggctgttctccagatattggtgtggttgggtcattctcatccttcaTGCTtgtggcagatagaccctaagggggcactcaggagactcaggggccctgcttactggtgttcatgcctttgtctaatcccctcaccttgagtgtggagatctgtgactttcttctcaccaatagctatggcaaaggtgatgggatgttatgctcttgattatgttacattacataaaactctgtttgctagggcatttgctctctctttcttct--ctctctctcaatctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcctccagatgagccagatgagaacacagccctggttgacaccttgattgcatcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55830383 1060 + 60714840 ttccagttctaagatgaagaagttcaggtgcccagcatggtgacaatggatgtgctaattaatttgactgtgataatcattacacaatgtacaggtggatcaaatcatcagattgtataccttgaatatatacaatcttcttttgtcaatttgatatttttaaatttaaaaaGTTGTATTGCCTGAAATGCACCAACTCTTACTACATCTAATCCCTTATTTTCCAAAAGCTGCCAGAGgccgggcatgatggcatgtgcctgtaatctcagctgcttggggggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcaca-------------------------------------------ccactgcactccagcctgggcaacggagtgagaccctgtctcaaaaaaaaaaaaaaaaaaa-------gtagccagtgacccttcaagcatgtaaataaaatcatgccatcctccagctcaacttcatcagtgggttcctgttctttcaaagcagactctaggaccagttcaaacacccacaagatcctagatgctctaggccctgcct---------------------------------tctgtcctcctttctgtgtctcaatcattccaggaacactcacacttgtgagactttgattttgctgctctctctccctggagggctgttctccagatatcggtgtggttgggtgattctcatccttcatgtctgtggcagatagaccctaagggggcactcaggagactcaggagccctgcttcctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagctatggcaaaggtgatgggatattatgctcttgattatgttacattacataaaa--ctgtttgctagggcatttgctctctctttcttct--ctctctctcagtctctcttcttgcaagtgctgcagaatcagtctagcatgaatcctacagctgtaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccagtcaagcct---------ccagatgagaacacagccctggttgacaccttgattgcatcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59886078 1081 + 64156825 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtatagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncc-----------------gaaa-------------------aaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgtcttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcaTGCCtgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatctcctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatgttgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i rheMac3.chr19 I 311 C 0 s macFas5.chr19 54903309 1092 + 59248254 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcattacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTGATCCCTTATTTTCCAAAAGCAGCCAGAGgccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgattgca-------------------------------------------ccattgcactccagcctgggcaacagagtgag---ctgtctcgaaaaaaaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccagttcaacttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctatccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctctccctgaagggctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgacagatagaccttaagggggcactcaggagactcaggagccctgctttctggtgttcatgcccttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaatagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctc----ctctctcaatctctcttcttgcaagtgctgcagaatcagtctaacatgaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggatgacaacttgattgcatcctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47023522 1094 + 51301725 TTCCAGTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTGGCAATGGATGTGCTAATTAATCTGCCTGTGATCATCATTACATAATGTACAGATGGATCAAATCATCAGATTGTAtatcttgaatatatacaatCTTCATTTGtcaatttgatatttttaaatttaaaaagtcatattgcCTGAAATGTACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGccagaggccaggcatgatggcatgtgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaatgctgcagtgagctgtgatcgca-------------------------------------------ccattgcactccagcctgggcaacagagtgagaccctgtctcggaaaaaaaaaaaaaaaaaaa-----gcagccagtgACCCTTCaagcatataaataaaatcatgccattctccagttCAACTTCATCAGTGGGTTCCTGTTTTTTCAAAGCAGACTCTAGGACCAGTTCAAACACCCACAAGACCCTAGATGCTCTAGGCCCTGCCTTCTATCCACACCTTTTATTCTGCTGTTCTTTTCTCTGTCCTCCTTTCTGTGTCTCAATCATTCCAGGAACACTCACACTTCTGGGACTTTGCTTTTGCTGCTGTCTCTCCCTGAAGGGCTCTTCTCCAGATATTGATGTGGTTGGGTCATTCTCATATTTCATGCCTGTGACAGATAGACCTTAAGGGGGCACTCAGGAGACTCAGGAGCCCTGCTTTCTGGTGTTCATACCCTTGTCTAATCCCCTCACCTTGAGTGTGGAGACCTGTGACTTTCTTCTCACCAATagatatggcaaaggtgatgggatgtTATGCTCTTGATTATGCTACATTACATAAAACTCTGTTTGCTAGGGCatttactctctctctcctct----ctctctcaatctctcttctTGCAAGTGCTGCAGAATCAGTCTAACATGAATCCTAAAGCTGCAAAGAACCAGATATTGCTAGCAACCACAGGAGTGGAGAAATGGACCCTTCCCCAATCAAGCC----------CCAGATGAGAACCCAGCCCTGGTTGACAACTTGATTGCATCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46735676 1088 + 50890351 TTCCACTTCTAAGATGAAGAAGTTCAGGTGCACAGCATGGTggcaatggatgtgctaattaatctgactgtgatcatcgttacataatgtacagatggatcaaatcatcagattgtatatcttgaatatatacaatcttcatttgtcaattTGATATTTTTAAATTTAAAAAGTCATATTGCCTGAAATGCACCAACTCTTACCACATCTAATCCCTTATTTTCCAAAAGCAGCCAGAGgccgggcatgatggcatatgcctgtaatctcagctgcttgggaggctgaggtg------------------------------ggaggattacctgggcctgggaggtcaaggctgcagtgagctgtgatcgca-------------------------------------------ccactgcactccagcctgggcaacagagtgagaccctgtctcg-----aaaaaaaaaaaaaaa-----gcagccagtgacccttcaagcatataaataaaatcatgccattctccag------ttcatcagtgggttcctgttttttcaaagcagactctaggaccagttcaaacacccacaagaccctagatgctctaggccctgccttctgtccacaccttttattctgctgttcttttctctgtcctcctttctgtgtctcaatcattccaggaacactcacacttctgggactttgcttttgctgctctctgtccctgaagagctcttctccagatatcgatgtggttgggtcattctcatatttcatgcctgtgACAGATAGACCTTAAGGGGGCACTCGGGAGACTCAGgagccctgctttctggtgttcatgcctttgtctaatcccctcaccttgagtgtggagacctgtgactttcttctcaccaacagatatggcaaaggtgatgggatgttatgctcttgattatgctacattacataaaactctgtttgctagggcatttgctctctctctctctcctctctctctcaatctctctTCTTGCAAGTGCTTCAGAATCAGTCTAacattaatcctacagctgcaaagaaccagatattgctagcaaccacaggagtggagaaatggacccttccccaatcaagcct---------ccagatgagaacccagccctggttgacaccttgattgcatcctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102595990 1525 - 106955855 I a score=1413945.000000 s hg38.chr19_GL949753v2_alt 28037 608 + 796479 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagctgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTT--GTAATGGAAGCATTTATATGCCCATTTTgtaataagtaaaaagtagtataataaaaaagtaaaaagtaGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT s panTro4.chr19 58964763 610 + 63644993 atgagacccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccgtagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatagcttgctcttatttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTTTTTTGCAATGGAAGCATTTATATGCCCATTTTGTAATAAGTAAAAAGTAGTATAATAAAAAAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATGTGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATATGCCAGAGAACATAATTGGGAAATGGCAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55831443 584 + 60714840 atgagacccaaagcagaggattcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatagatcactaatacaATGCCTCTCAcacttattctccatctataatgtgttttttaattactctgatagcttgctcttatttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCACTAATTGTTTTT---GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCGAAGCAGCAAAAAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGTGATAGAGGTGAAGAAATCGGGAAACAGTAGATGATATTCCAGAGAACATAATTGGGAAATGGCAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102597515 583 - 106955855 AtgtgacccaaagcagaggactcagctaagctgtgcctagactcctgacccacatcaactgtgagataataaataggtgtttcagtctgctaaattagtggtaatttgttttgcagccatagatcactaatacaATGCCTCTCACAGTTATTTTCCATCTATAATGTGTTTTTTAATTACTCCAATAGCTTGCTCttatttatttatttctttcaaagaagaatgtgagctcctgttggccagagacctggtccatctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGGTGAACGGACAGCTATTTTTGTGCCAGGTATTTTGCATTAATTTTTTT----GTAATGGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATAAAGTGATTTGCAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTGGAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTACAGCTGCGATAGAGGTGAAGAAATCAGGAAACAGTAGATGATATGCCAGAGAACATAACTGGAAAATGGCAAAT i nomLeu3.chr10 I 1525 I 717 s rheMac3.chr19 59887159 581 + 64156825 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaATGCCTCTCAcagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTAAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904401 581 + 59248254 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgaggtaataaataggtgtttcaggcggctaaattagtggtaattagttatgcagccatagatcactaatacaatgcctctcacagttattctccatctataatgtgttttttaattactctgatatctttctg----ttatttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATTTTGCATTAAATTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATATAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGAACATAATTGGGAAATGGCAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47024616 585 + 51301725 ATGAGAACCAAAGCAGAGGACTCAGCTAAGCTGTGcctggactcctgacccacaTCAACTGTGAGGTAATAAATAGGTGTTTCAGGCTGCTAAAttagtggtaatttgttatgcagccatAGATCACTAATACAATGCCTCTCACAGTTATTCTCCATctataatgtgttttttaattacTCTGATATCTTTctgctatttatttctttcttccaaagAAGAATGTGAGCTCCTGTTGGCCAGAGACCTGGTCTGTCTCAGTTCCTACAATATGCTCAGGATCTACCAAAGTATCTGAATTTGTAGGCTGAATGGGCAGCTATTTTTGTGCCAGGTATtttgcattaaatttttttt--gtaatagaaGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGTAAAGCAGCAAACAGATTGTATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAATTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGCGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGAGCACATAATTGGGAAATGGCAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46736764 584 + 50890351 atgagaaccaaagcagaggactcagctaagctgtgcctggactcctgacccacatcaactgtgagataataaataggtgtttcaggctgctaaattagtggtaatttgttatgcagccatatatcactaatacaATGCccctcacagttattctccatctataatgtgttttttaattactctgatatctttctgttctttctttctttcttccaaagaagaatgtgagctcctgttggccagagacctggtctgtctcagttcctacaatatgctcaggatctaccaaagtatctgAATTTGTAGACTAAATAGGCAGCTATTTTTGTGCCAGGTATTTTGCATT-ATTTTTTTTT--GTAATAGAAGCATTTATATGCCCATTTTGTAAT-----------------------AAGTAAAAAGTAGTATAATCAAGTGATTTGCAAAGCAGCAAACAGATTATATATGGAAGGCTGACCTGGAAAATCAACCACTTTAAACTGATACTATAGCCTGTCTTGTGATGTAATGGTATAGCTGTGATAGAGGTGAAGAAATCAGGAAATAGTAGATGATCTGCCAGGGAACATAATTGGGAAATGGCAAAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I a score=77884.000000 s hg38.chr19_GL949753v2_alt 28645 44 + 796479 AATCGCGAGGCTTTTAGGGCTAAAGTGTGGGTGCAGAAATTCTT s panTro4.chr19 58965373 44 + 63644993 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTGCAAAAATTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832027 44 + 60714840 AATCACCAGGCTTTTAGGGCTAAAGTGTGGGTGCGAAAATTCTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59887740 44 + 64156825 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54904982 44 + 59248254 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGAATGAAAATTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025201 44 + 51301725 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGgaatgaaaattctt i papAnu2.chr19 C 0 I 15035 s chlSab2.chr6 46737348 44 + 50890351 AATCGCCAGGCTTTTAGGGCTAAAGTGTGGGTACGAAAATTCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=310628.000000 s hg38.chr19_GL949753v2_alt 28689 239 + 796479 AAGACTACAAGAACGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACGGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG s panTro4.chr19 58965417 239 + 63644993 AAGACTACAAGAATGAGTTATGGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACTTTGTTGGAGTATCATTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTATTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCACAGCTACTTCTACACTACACTGATGACTGTAAAGTCTCTCCAGGGATTTCCCATGATATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832071 234 + 60714840 AAGACTACAAGAAAGAGTTATTGGGAATACAATTTGAAATCAATATCAAAGTGATGAGCACCTTGTTGGAGCATCATTGATCAACAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTT-----CTACACTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i ponAbe2.chr19 C 0 M 630 s rheMac3.chr19 59887784 238 + 64156825 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905026 238 + 59248254 AAGACTACAAGAAAAAGTTATTGGGAATACAA-TTGAAATCAACATCAAAGTGATGAGAACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAGCCCAGGCTAAGTCATTGGTGTGGACCCATGGCTACTTCTGCACTACATTGATGACTGTAAGGTCTCTCCAGGGATTTCCCATGATATGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46737392 239 + 50890351 AAGACTACAAGAAAAAGTTATTGGGAATACAATTTGAAATCAACATCAAAGTGATGAGCACCTTGTTGGAGCATCACTGATCAAGAGCCTCAGAAAGAGGGTAAATCAGAGGTGAAACATTAAGTACTCAGTTACTCATCATGCCCCAAACCCAGGCTAAGTCATTGGTGTGGACCCTTGGCTACTTCTGCACTATACTGATGACTATAAGGTCTCTCCAGGGATTTCCCATGATATGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=238356.000000 s hg38.chr19_GL949753v2_alt 28928 287 + 796479 CAGGACTGACCTACTGGAAGCAACTGTGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggatggatggatagatggatAggtgggt-gggggtgagtgaatgggtgaaagggtggatgagtggatgaatgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtaggtagatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga s panTro4.chr19 58965656 279 + 63644993 CAGGACTGACCTACTGGAAGCAACTGCGGTCAGTTGAGAGGTATTGTTTAGTGACTAATAaatgaatggatga----------------atggatggatggatggatggat--------atatggatAGGTCGGT-GGGGGTGAGtgaatgggtgaaagggtggatgagtggatgaaagggtggaaggatggacaaatgagtggctgggtaaatagatggGTAGGTAGGTAgatagatggatgaaggggtgggtggacagatgaatggaagggttggtggttggatggattaatggatagatga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888022 296 + 64156825 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAatgaatagatggatggatggatggatgaatggatggatggatggatggat--------atatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgAAGGGGTGGGTAGACGAATGAATGGAAGGGTTGGTGGTtggatggattaatggatagatga i rheMac3.chr19 C 0 I 236 s macFas5.chr19 54905264 280 + 59248254 CCAGATTGACCTACTGGAAGCAACTGTAGTCAATTGAGAGATATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagagtggatgagtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtaggtgggtagatagatggatgaaggggtgggtagacgaatgaatggaagggttggtggttggatggattaatggatagatga i macFas5.chr19 C 0 I 192 s chlSab2.chr6 46737631 280 + 50890351 CCAGATTGACCTACTGGAAGCAACTGTAGTCAGTTGAGAGGTATTGTTGAGTGACTAATAAATGAATAgatgg----------------atggatggatggatggatggat--------ATatggataggtgggtggggggtgaatgaatgggtgaaagggtggatgggtggatgagtgggtggaaggatggacaaatgagtggctgggtaaatagatgggtacgtgggtagatagatggatgaaggggtgagtggacgaatgaatggaagggttggtggttagatggattaatggatagatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=9460.000000 s hg38.chr19_GL949753v2_alt 29215 10 + 796479 atggatggat s panTro4.chr19 58965935 10 + 63644993 atggatggat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888554 10 + 64156825 atggatggat i rheMac3.chr19 I 236 C 0 s macFas5.chr19 54905736 10 + 59248254 atggatggat i macFas5.chr19 I 192 C 0 s chlSab2.chr6 46737911 10 + 50890351 atggatggat i chlSab2.chr6 C 0 I 176 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=277224.000000 s hg38.chr19_GL949753v2_alt 29225 329 + 796479 ggatggatggatggatggatggatgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtaggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------gggtagattgatagatggatgggtgagtAGATAAATGGGTAGATGAAAGTGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATGTATGTTACAATCCTCCCACGTGCATCTTCTCACTGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCGTGCCTCCCATACTTTTCCACACAATGGGA s panTro4.chr19 58965945 385 + 63644993 ggatggatggatggatggatggatgagttgatggatagatggatggatggatggatgagttgatggatagatggataagtgagtggatggatggGTGAATGAGTGGGTAGGAGAGtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggtaggtagattgatagacggatgggtgggtagattgatagatggatgggtgggtagataaatggGTAAATGAAAGCGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCATTTATGTTACAATCCTCCCACGTGCATCTTCTCACCGTGGTCCTCATCATTTTTT--TTTCAGTTACCTGCACCATGCCTGCCACACTTTTCCACACAATGGGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59888564 331 + 64156825 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtAGATAAACGGGTAGATGAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54905746 331 + 59248254 ggatggatggatggatggatgggtgagttgatggatagatggat--------------------------------aagtgagtggatggatgggtgaatgagtgggtgggagggtagatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagatggatgggtgggtagataaacgggtagatgAAAATGATGCAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTTAATTTCAGTTGCCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738097 327 + 50890351 ggatggatggatggatggatgggtgagtt----gatagatggat--------------------------------aagtgagtagatggatgggtgaatgagtgggtgggagggtggatgggttggtaggtgggtagatgggtgggtgggttgatagatgggt------------------------aggtggatggatagacagattggtgggtagataaatgggtagatgaaagtgatgTAAAATTATTCTTTATCCCTCTTCCTTGGGATCTCAAGTCACTTATGTTACAATCCTCCCATGTGCATCCTCTCACTGTGGTCCTCATCATTTTTAAATTTCAGTTACCTGCACCATGCCTGCCATATTTTCCCACACAATGGGA i chlSab2.chr6 I 176 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e ponAbe2.chr19 55832305 630 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=385562.000000 s hg38.chr19_GL949753v2_alt 29554 302 + 796479 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATgtctgaatagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT s panTro4.chr19 58966330 301 + 63644993 TCTCTTAGCCCCACAATCCATTATTTGCCATTCCTACATCCCTCATGGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAATGAAATATAAA-TTTTCATTTATGTCTGAATAG-AACTGTGAAGCTCATTGTTTTtgtgaaaccggggaggtcacctaatctctatgagcaaaaagaagttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55832935 301 + 60714840 TCTCTTAGCCCCATAATCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTCCTTCTCTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaacagcaactgtgaagctcattgtttttgtgacaccggggaggtcacctaatctccataagcaaaaagaagttagtaacacaaccaccctcataggaaatgaagactgaatgtgttagtggaggcaagttacctgtc-tagagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i ponAbe2.chr19 M 630 C 0 s rheMac3.chr19 59888895 297 + 64156825 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAGATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906077 297 + 59248254 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAA-TTTTCATTTATgtctgaactgcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcacaggaagtgaagactgaatgagttagtggaggcaagttacctgtcgtggagagaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738424 298 + 50890351 TCTCTTAGCCCCATCCTCCATTATTTGCCATTCCTACATCCCTCATAGAGCACTGGACACTCTTTCTGGCTTTTCTTCTGTGGCATAAAGAAATATAAATTTTTCATTTATgtctgaacagcaactgtgaagctcattgtctttgtgacatcggggaggtcacctagtctctataagcaaaa-----ttagtaacacaaccaccctcataggaagtgaagactgaatgagttagtggaagcaagttacctgtcgtggagacaggaacatagaaaatgctggatacatgtCAAATGCCAGTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19471036 2753 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=12555.000000 s hg38.chr19_GL949753v2_alt 29856 8 + 796479 ATCACTCT s panTro4.chr19 58966631 8 + 63644993 ATCACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833236 8 + 60714840 ATCACTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889192 8 + 64156825 ATCACTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906374 8 + 59248254 ATCACTCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738722 8 + 50890351 ATCACTCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184196 8 + 122678785 ATCATGCA i canFam3.chr1 n 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47025245 15035 + 51301725 I a score=226918.000000 s hg38.chr19_GL949753v2_alt 29864 133 + 796479 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC s panTro4.chr19 58966639 133 + 63644993 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCAGAGCATG-----------------------------------AAATCAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833244 133 + 60714840 ATCCTCACCTGTCACCCAGATCTCCAGCTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTTGCTCAGGTAATACACACAGCTGTAGTTTCCACTGTCATTACTTGTCACGTTCCACAGCATG-----------------------------------AAATCAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889200 133 + 64156825 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906382 133 + 59248254 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCATTGCCATTACTTGTCACATTCCAGAGCATG-----------------------------------AAATCTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040280 133 + 51301725 ATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAGCGTTGCCGGCTGTCACGTCCTCCAGGGTG-----------------------------------AAGTCCGTC i papAnu2.chr19 I 15035 C 0 s chlSab2.chr6 46738730 168 + 50890351 ATGCTCACCTGTCACCCAGATCTCCAACTTGTTGCTGGGGAAGGAGGCCAAGTGTGATGAGTCACTCAGGTAATACACACAGCTGTAGTTTCCACTGCCATTACTTGTCACATTCCAGAGCATTCACATCTGTCTGTTTTTTTCTTACTTGTCACATTCACATCTGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103184204 133 + 122678785 AAACCTACCTCTCACCTGGATCTCCAGAAAATTGCTAGGCTGTGAGGTCAAAAAAGGGGCCCCTATCTGGAAGTACACGCAGCTGTAGTTCCCGGCATCACTGACTGTCACACTCCTGAGGGAG-----------------------------------AAGTCTGTC i canFam3.chr1 C 0 T 1206 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 29997 1 + 796479 T s panTro4.chr19 58966772 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833377 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889333 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906515 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040413 1 + 51301725 T i papAnu2.chr19 C 0 T 14866 s chlSab2.chr6 46738898 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19473789 1 - 122678785 t i canFam3.chr1 I 2753 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=348393.000000 s hg38.chr19_GL949753v2_alt 29998 205 + 796479 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAACAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC s panTro4.chr19 58966773 205 + 63644993 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCGGTTCCATTGTATGGAGTGAGACATCGAAGTGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833378 205 + 60714840 GGTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCGAAGTGTT---CTGGGACCTGGAGTCATCCCA-----------GGGTCTACACTGACTGAGAGCAAAGGTTCTGGGAGTGATCCTGAAGAGGACAAGGCAATGGAGGTAAAGAGAAGGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889334 205 + 64156825 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54906516 205 + 59248254 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTTAGACATCAAAATGTC---CTGAGACCTGGAGTCATCCCA-----------GGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTGAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46738899 216 + 50890351 GTTTTTTTCTTACTTGCCTGACTTGTAATGGTTCTGGGATCCCCATTTTCAGCAGAGCAATTACAATACATTCAGTTCCATTGTATGGAGTGAGACATCAAAGTGTC---CTGAGACCTGGAGTCATCCCAGGGTCATCCCTGGGTCTACATTGACTGAGAGCAAAGGTTCTGGGAGTGACCCTAAAGAGAACAAGGCAATGGAGGTAAAGAGAAGGGC i chlSab2.chr6 C 0 I 457 s canFam3.chr1 19473790 208 - 122678785 GGATTTTTCTTATTTTCTCAAATTGTAGTGGTTCTGGAATCCCTGTTTTCAGCAGAGCAAGAGCAATACATTTGTGTCTATTGTATGGAATCAGACATCAGAGTCTCATACTGTGACCTGGAGTCATCTCG-----------GGGTCTATATTGAGTAAGAGGGAAGGTTTTAGGAGGGATTCTGAAGAGGACAAAGCAACAGGGGTGAAGAGAAGTAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=4153.000000 s hg38.chr19_GL949753v2_alt 30203 4 + 796479 CAGG s panTro4.chr19 58966978 4 + 63644993 CAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833583 4 + 60714840 CAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889539 4 + 64156825 TAGG i rheMac3.chr19 C 0 I 345 s macFas5.chr19 54906721 4 + 59248254 TAGG i macFas5.chr19 C 0 I 354 s canFam3.chr1 19473998 4 - 122678785 CAAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46739115 457 + 50890351 I e papAnu2.chr19 47040414 14866 + 51301725 T a score=344342.000000 s hg38.chr19_GL949753v2_alt 30207 174 + 796479 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcatcttctgcatttgatgctttaacatcttggggccttgctgcccttggtgggacctcccctcgcagggttagttaatttctagagccagtaaacaacttgtcctcaag s panTro4.chr19 58966982 170 + 63644993 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtatta---accatgtctttcatcttccgcatttgatgctttaacgtcttggggccttgctgcccttggtgggacctcccctcgcagggtta----atttctagagccagtaaacaacttgtcctcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833587 174 + 60714840 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCCgtatta---accatgtctttcattttctgcatttgatgctttaatgtcttagggccttgctgcccttggtggtacctcccctcccagggttagttaatttctagagccagtaaacaacttgtcctcaag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59889888 176 + 64156825 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i rheMac3.chr19 I 345 C 0 s macFas5.chr19 54907079 176 + 59248254 gcttttccattttctACTGCACTTGGGGACTATCTCATCCATCTCTCtgtattaaccaccatgtctttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagtcagtaaaccacttgtcctcaa- i macFas5.chr19 I 354 C 0 s papAnu2.chr19 47025548 176 + 51301725 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCGTCCACCTCTCTGTATTAACCACCATGTCTTTCATTTTCTGCATttgatgctttgacatcttgggGCCTTGCTGCCCTTGGTGGGACCACCCCTCCCAGGGTTAGTTAATTTCTAGAGCCAGTAAACCACTTGTCCTCAA- i papAnu2.chr19 T 14866 C 0 s chlSab2.chr6 46739572 161 + 50890351 GCTTTTCCATTTTCTACTGCACTTGGGGACTATCTCATCCATCTCTCTGTA---------------ttcattttctgcatttgatgctttgacatcttggggccttgctgcccttggtgggaccacccctcccagggttagttaatttctagagccagtaaaccacttgtcctcaa- i chlSab2.chr6 I 457 C 0 s canFam3.chr1 19474002 168 - 122678785 GCATCCACA-TTTCCAATGCACCTGGGGTCATTCTTACCCATCTCt--atatta---accacatcttttattttctgtattcaacactttgatatcttgggaccttgctgacccta--gagatatcccctctcaagg-tatccacttcctagagaaaggagacaactttccctcaag i canFam3.chr1 C 0 I 137 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=362884.000000 s hg38.chr19_GL949753v2_alt 30381 175 + 796479 --------gatgtccctcaaatgcaagccaatagatccagagcccatactctcaaccaccttaattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttgtttttcttt s panTro4.chr19 58967152 175 + 63644993 --------gatgtccctcaaatgcaagccaatagatccagagcccacactctcaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagcctctacaccccaaagccaattctttttttctttttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833761 175 + 60714840 --------tatgcccctcaaatgcaagccaatagatccagatcccacactccaaaccaccttcattatggggctctcacactcaaggtcaatgttgtcctctcctaatcaccccaggtccaagaaatagacaaccagggacagcctctataccccaaagccaattctttttttctttttcttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890064 175 + 64156825 --------tatgtccctcaaatgcaagccaatagatccagagccctcattcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907255 175 + 59248254 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaatcaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattctttttttttttcttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025724 175 + 51301725 --------TATGTCCCTCAAATGCAAGCCAATAGATCCAGAGCCCTCACTCCCAACCACCTTCATGATGAGGCTCTCACACTCAAGGTGAAAGTTGTCCTCTCCTAATCACCCCAGGTCCAAGAACTAGACAACCAGGGACAGTCTCTATACCCCAaagcccattcttttttttttttctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739733 172 + 50890351 --------tatgtccctcaaatgcaagccaatagatccagagccctcactcccaaccaccttcattatgaggctctcacactcaaggtgaaagttgtcctctcctaattaccccaggtccaagaactagacaaccagggacagtctctataccccaaagccaattcttttttcttttttt--- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474307 181 - 122678785 gatgCAAgcacccttcttaagtgcaaaacaaccaatccagagctcatacttccaaccacctcctctat--ggctctcacactctgggccagggttcccctgccctaatcacttcagggccagataccagacagtcagggacagcatctataccccatagttaatcctaagcctgttccttctt i canFam3.chr1 I 137 I 1 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=576564.000000 s hg38.chr19_GL949753v2_alt 30556 351 + 796479 tctttct--------ttcttttcttttctttt-cttttttttt---ttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacgatcttggctcaccgcagcctctgcctctggggttcaagcaattctcgtgcctcagcctcccgagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccaccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc s panTro4.chr19 58967327 355 + 63644993 tctttct--------ttcttttcttttctttttcttttcttttcttttttttttttttttttgagacaggttctcattctatcacccaggcttgagcacagtggcatgatcttggctcacggcagcctctgcctccggggttcaagcaattctcgtgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggtaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctaggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55833936 363 + 60714840 tctttcttttctttcttcttttcttttctttttcttttttttttttttttttttttttttttgagacaggttctcattctatcacccaggcttgagtgcagtggcacaatcttggcttactgcagcctctgcctcctgggttcaagcaattctcatgcctcagcctcccaagtagctgaaagcacaggtgcacaccaccacacccaggcaattattgtatttttgtagagatggggtttcgccatgttacccaggctgatgtcaaactcctgacctcaggtgatccgccctcctcggcctcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59890239 313 + 64156825 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcctgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907430 313 + 59248254 t--------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacgatcttggctcaccgcagcctctgcctcccaggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattatatttttgtagagatggagtttcgccttgttacccaggctgatgtcacactcctgacctcaggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47025899 348 + 51301725 ttctttc--------tttctttcttttttctttcttttc-------ttttctttttttttttgagacaggttctcattctatcacccaggcttgaatgcagtggcacaatcttggctcactgcagcctctgcctcccgggttcaagcagttctcgtgcctcagtctcccaagtagctggaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggaatttcgccatgttacccaggctgatgtcaaactcctgacctcaggcgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctAATCTTGTTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46739905 312 + 50890351 ---------------------------------------------------tttttttttttgagacaggttctcattctatcacccaggcttgaatgtagtagcacgatcttggctcaccgcagcctctgcctcccgggttcaagcaattctcgtgcctcagtctcccaagtagctgaaagcacaagtgcacaccaccacacccaggtaattattgtatttttgtagagatggagtttcaccatattacccaggctgatgtcaaactcctgacctcgggtgatccgccctcctcggcttcccaaagtgctaggattacaggcatgaaccaccacacctggccaactctaatcttgttctccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474488 1 - 122678785 I e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=274550.000000 s hg38.chr19_GL949753v2_alt 30907 144 + 796479 cacaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctcattgaccctggtgcttccccacatactcc-----ccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa s panTro4.chr19 58967682 146 + 63644993 cacaaaatacagtcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggtgcttccccccatacccc---acccccagtatagccttcctcctcctcttgggaactg-taacagacca---tcttttccatggcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55834299 146 + 60714840 cgcaaaatacaatcaaagctctggtccacagttcttcctcctccctctgc-ccctgattgaccctggggcttccccccatacccc----cccatagtatagggttcctcctcctcttgggaactgttaacagacca---tcttttccatggcaA i ponAbe2.chr19 C 0 M 1306 s rheMac3.chr19 59890552 145 + 64156825 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907743 145 + 59248254 cacaaaatacaatcaaagctctggcccacag---ttcctccttcctctgc-ccctgattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacca---tcttttccatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026247 148 + 51301725 CACAAAATACAATCAAAGCTCTGGCCCACagttcttcctccttcctctgc-ccctgATTGACCCTGGTGCTTcccc-catacccccacccccATAGTATAGCCTTCCCCCTCCTCTTGGGAACTG-TAACAGACCA---TCTTTTCCATGGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740217 146 + 50890351 cacaaaatacagtcaaagctctggcccacagttcttcctccttcctctgc-cc--gattgaccctggtgcttcccc-catacccccacccccatagtatagccttccccctcctcttgggaactg-taacagacct---tcttttccatggcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474489 145 - 122678785 cagaaaccacagtaaaggctcttgccta---gtcttatccctccctctgcttcctcactgaccctgatacttctctatatggccc----tgtatggcatggcatacc-cctcttcttgggaagtc-taacaaactatgtttttttcaatgacag i canFam3.chr1 I 1 C 0 e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=25604.000000 s hg38.chr19_GL949753v2_alt 31051 24 + 796479 tcatcacttg------------------------------gtctgtcagtctta-- s panTro4.chr19 58967828 24 + 63644993 tcatcacttg------------------------------gtctgtcagtctta-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890697 24 + 64156825 tcatcgcttg------------------------------gtttgtcagtctta-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907888 24 + 59248254 tcatcgcttg------------------------------gtttgtcagtctta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026395 24 + 51301725 TTATCGCTTG------------------------------GTTTGTCAGTCTTA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740363 24 + 50890351 tcatcgcttg------------------------------gtttgtcagtctta-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474634 56 - 122678785 tcatctcttaaaaaaaaaaaaaaaaaaaaaaaaGACAGTCATCTCTTCATCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45314863 3697 + 49145316 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=254051.000000 s hg38.chr19_GL949753v2_alt 31075 134 + 796479 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAA------TCTCTGATGAGAATCTTGCTCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC s panTro4.chr19 58967852 134 + 63644993 -----ccatacccc-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAAAA------TCCCTGATAAGAATCTTGCCCCACATTC-GGTTCCCATTTC----------CACATTGAAGGTGTTGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890721 141 + 64156825 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54907912 141 + 59248254 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACCCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026419 137 + 51301725 -----CCGTACCCT-AATTTTCTATTA----ACCATATTCTACACCACTCTCCCACATCCACATCATTAGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740387 141 + 50890351 -----ccgtaccct-aatTTTCTATTAACTGACCATATTCTACACCACTCTCCCACATCCACATCATTGGGACCCTCTCAGAATCCCTGTCCCTGATGAGAATCTTGCCCCACGTTCGGGTTCCCATTTC----------CACACTGAAGGTATTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318560 130 + 49145316 -----CTGTACCCC-CATTTTCTATTG----ACCGTATTCTACACCACTCTGCAGCATCCACATCATTGGGACCCTCTCACAA------TCCCTGATGGGAATCTTGCCCCACATTC-CGTTCCCATTTC----------CACATTTAAGATGTCGC i calJac3.chr22 I 3697 C 0 s canFam3.chr1 19474690 149 - 122678785 CCATACTGTACCTCAAATTTTCTATTGGCA-TCTATATTCTAAAACACTCTCCCACATCCACCTCATTGATACATACTCATAA------TCTTTGATGAGAGCCTGTCCCCACACTC-ACTTCCCATTTCTCCCATACTTTACACCCAAGTGGTCAC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=516.000000 s hg38.chr19_GL949753v2_alt 31209 2 + 796479 AT- s panTro4.chr19 58967986 2 + 63644993 AT- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890862 2 + 64156825 AT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908053 2 + 59248254 AT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026556 2 + 51301725 At- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740528 2 + 50890351 AT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474839 2 - 122678785 -TC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=327264.000000 s hg38.chr19_GL949753v2_alt 31211 321 + 796479 CTATCCttcttcttctt--------ttttttttttagacggagtcttgctctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagagattctcttcctgcctcagcctccctagtagctgggattacaggcgcctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccgacctcaagtgat------------------------------ctgcccacctctgcctcccaaagtgctgggattacaggcatgagccaccgcgccGTGCCTGGCCTGCAT s panTro4.chr19 58967988 329 + 63644993 CTATCCttcttcttcttcttcttttttttttttttagacagagtcttgttctttcatccaggctgcagtgcagtggcacaatctcagctcattacaacctctgccttctgggctcaagggattctcctcctgcctcagcctccctagtagctgggattacaggcacctgccaccacgcccagctaatttttgtattttaa------------------------------------------------------------gtagaggtgaggtttcaccatgttggccaggctggtctcgaactcccaacctcaagtgat------------------------------ctgcccacgtctgcctcccaaagtgctgggattacaggcatgagccactgcgccGTGCCTGGCCTGCAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59890864 315 + 64156825 CTATCC----ttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgccc--------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908055 318 + 59248254 CTATCC---tttttttt--------tttttttttgagacagagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------ccgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcgccGTGCCCGGCCTGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026558 312 + 51301725 ctatcc---------ct--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtgacacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcctcagcctccctagtagctgggattacaggtgcccaccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccatgttggccagactggtctcgaactcctgacctcaagtgat------------------------------tcgcccacctctgcctcccaaagtgctgggattacaggcgtgagccaccgcaccgtgcccagcctgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740530 320 + 50890351 CTATCCtt-tttttttt--------tttttttttgagacggagtcttgctctttcatccaggctggagtgcagtggcacaatctcggctcattacaacctctgcctactgggttcaagtgattctcctcctgcttcagcctccctagtagctgggattacaggtgcccgccaccacacccagctaatttttgtattttta------------------------------------------------------------gtagagttgaggtttcaccattttggccagactggtctcaaactcctgacctcaagtgat------------------------------ccacccacctctgcctcccaaagtgctccgattacaggcgtgagccaccgcaccgtgcccggccTGCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19474841 0 - 122678785 C e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949753v2_alt 31532 2 + 796479 CT s panTro4.chr19 58968317 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891179 2 + 64156825 CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908373 2 + 59248254 CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026870 2 + 51301725 cT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740850 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19474841 2 - 122678785 CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55834445 1306 + 60714840 M e calJac3.chr22 45318690 0 + 49145316 C e nomLeu3.chr10 102598098 717 - 106955855 I a score=145492.000000 s hg38.chr19_GL949753v2_alt 31534 71 + 796479 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG s panTro4.chr19 58968319 71 + 63644993 ATCTTTTTGTCTCCTAGATTCCTTCTTCCCCAGCCATGTCCCACGACAG---GAAAAGAAATACGTGCATCAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891181 71 + 64156825 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54908375 71 + 59248254 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---GAAAAGAAATACGTGCATCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026872 71 + 51301725 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCATGTCCCacaacag---gaaaagaaatacGTGCATCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740852 71 + 50890351 ATCTTTTTGTCTCCTGGGTTCCTTCTTCCCCAGCCACGTCCCACAACAG---TAAAAGAAATACGTGCATCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318690 74 + 49145316 ATGTTTTTGTCTCCTGGGTTCCTTCCTTCCCAGTCACATCCCCCAACAGAAAAAAAAAAAAAACTCACATCAgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474843 71 - 122678785 GTCTTTTTGTTTCCTGGATTCTTCTTTCACCAACCAGGCTCCATCACAA---GAAAAGGACTATATGCCTCAAG i canFam3.chr1 C 0 I 8 e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=4011.000000 s hg38.chr19_GL949753v2_alt 31605 2 + 796479 CA s panTro4.chr19 58968390 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891252 2 + 64156825 CA i rheMac3.chr19 C 0 I 397 s macFas5.chr19 54908446 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026943 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740923 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318764 2 + 49145316 ca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I a score=146770.000000 s hg38.chr19_GL949753v2_alt 31607 110 + 796479 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa s panTro4.chr19 58968392 110 + 63644993 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908448 110 + 59248254 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagactagcctgggcaacat----agatcctgtctcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47026945 110 + 51301725 GGCtttggtgactcacgcctgtaatcccagcactttgggaggccaaggcaggaggatcacctgagctcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46740925 110 + 50890351 GGCTTTggtgactcacgcctgtaatcccagcactttgggaggccaaggaaggaggatcacctgaactcaggagttcaagaccagcctgggcaacat----agatcctgtctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45318766 114 + 49145316 ggcctcggtgactcaagtctgtaatcccagcactttgagaggccaaagcagaaggataacctgagctcaggagttcaagaccagcctgggcaatatagagagatcctgtctcaa i calJac3.chr22 C 0 I 926 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=426628.000000 s hg38.chr19_GL949753v2_alt 31717 458 + 796479 caagtaatttaaaaattagccaggcatggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaatcgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagcgagattctgt--caaaaaaaaaaaaa---------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccaggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcagtgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc s panTro4.chr19 58968502 456 + 63644993 caagtaatttaaaaattagccaggcacggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggtgacagagagagattctgt--caaaaaaaaaaa-----------GCA-----gccgagcgcagtggctcactcctgtaatctcagcactttgggaggctgaggtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctggccaacatggtaaaaccctgtctctactaaaatacaaaaattagccgggtgtggtggcgcacccctgtagttccagctactcgggaggctgaggcaggtgaattgcatgaacccaggaggcgggggttgcaatgagctgagatcatgccactgtactccagcctgggcaacagagcaagactccctctc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54908558 460 + 59248254 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgtgcatgccactgcactcctgcctgggcgacagagcgagattctgt--caaaaaaaaaaaaaaaaacaaaaacaaaaCCGCCAAGCGCAGTGGC------------tcccagcactttgggaggctgagatgggcagatcacttgaggtcagcagttcgagat-------------------------------cagtctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtgcacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcagtgagctgagatcatgccactgcactctagcctaggcgacagagcaagactgcctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027055 467 + 51301725 caaatactttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctgcttgggaggctgatgtgggaaaattgcttgagcctgggaggttgaggctgcagtgaattgtgttcatgccactgtactcctgcctgggcgacagaacgagattctgt--caaaaaaaaaaaaa-----aaaaacaaagcagccaagcgcagtggcttactcccgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtcagcagtttgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggcggagattgcaatgagctgagatcacgccactgcactccagcctaggcgacagagcaagactgcctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741035 464 + 50890351 caaataatttaaaaattagccaggcgtggtggtgcttgcctgtactcccagctacttgggaggctgatgtgggaaaattgcttgagcctgggaggtcgaggctgcagtgaattgtgttcatgccactgcactcctgcctgggcgacagagcaagattctgtaccaaaaaaaaaaaaa-----aaaGACA-----gccaagcgcggtggcttactcccgtaatcccagcactttgggaggctgatgtgggcagatcacttgaggtcagcagttcgagat-------------------------------cagcctgaccaacatggtaaaaccctgtctctactaaaatacaaaaattagcccggtgtggtggtccacccctgtagtttcagctactcgggaggctgaggcaggtgaattacatgaacccaggaggtggagattgcaatgagctgagatcatgccactgcactccagcctaggcgacagagcaagactgcctctc i chlSab2.chr6 C 0 I 2703 s calJac3.chr22 45319806 421 + 49145316 caaaaAAAC--AAAAGCAgccaggcacagtggctcactcctgtaattcccgcaatttgggaggctgaggcaggcaaatcatgtgaggtcaggagttcaaaa-------------------------------tcagcctcactaacatggtgaaaccctac--taaaatacaaaaat----------ta-----gctgggtgtggtggcacagccctgtagtcccagctactcgggaggctgaggtag---aagtgcttgaactcaggaggtggaggtttcagtaagctgagattgtgtcactgcactccagcttgggagacagagcaagacaaccactcaaaaaaaaaaaaaaaaaTGGTTTGGAGAggtggctcacacgtgttaatcccgccctttgggagcctgtggtgagtggatcacctgaggtcaggagtttgagat-------------------------------cagcctcaccagtatggtgaaacctcatctc i calJac3.chr22 I 926 I 5 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e rheMac3.chr19 59891254 397 + 64156825 I a score=8898.000000 s hg38.chr19_GL949753v2_alt 32175 27 + 796479 aaaaaaaaaaaaaag-------------gctgggtgtgga s panTro4.chr19 58968958 32 + 63644993 aaaaaaaaaaaaaaaaaa--------aagctgggtgtgga i panTro4.chr19 C 0 C 0 s macFas5.chr19 54909018 29 + 59248254 aaaaaaaaaaaaaaa-----------aTgccgagcacggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027522 40 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaaacacgccgggcactgt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320232 27 + 49145316 --aaaaacaaaaatt-----------gggccaggcgaggt i calJac3.chr22 I 5 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I e rheMac3.chr19 59891254 397 + 64156825 I a score=100170.000000 s hg38.chr19_GL949753v2_alt 32202 87 + 796479 ggttcacgtttataatcccagccctttgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatat s panTro4.chr19 58968990 87 + 63644993 ggttcacgtttataatcccagccctctgggaggccgaggcagatggatcacttgaggtcaggagtttgagatcaacctcaccaatac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59891651 87 + 64156825 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i rheMac3.chr19 I 397 C 0 s macFas5.chr19 54909047 87 + 59248254 ggttcacgtttgtaatcccagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaccagtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027562 87 + 51301725 ggttcacgtttgtaatcctagccctttgggaggccaaggcagatggatcacctgagatcaggagtttgagatcaacctcaCCAGTAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320259 84 + 49145316 ggctcacacctgtaatcc-agcactttgggaggccaaggcggatggatcac--aaggtcaagagatcgagaccatcctagtcaacat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e ponAbe2.chr19 55834445 1306 + 60714840 M e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=183878.000000 s hg38.chr19_GL949753v2_alt 32289 124 + 796479 ggtacaacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcggaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc s panTro4.chr19 58969077 124 + 63644993 ggtataacctcatctttattaaaaatacaaaaatta-ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--aaggtcaggagatggaga-------------------------------ccatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835751 125 + 60714840 GGTATAACCTCGTCTTTATTAAAAATACAAAAATTACCgctgggcgcggaggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggaccac--gaggtcaggagatggaga-------------------------------ccatcc i ponAbe2.chr19 M 1306 C 0 s rheMac3.chr19 59891738 124 + 64156825 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909134 124 + 59248254 ggtacaaccacgtctttattaaaaatacaaaaatta-ggccaggctcggtggctcacacctataatcccagcactttgggaggccgaggtgggcggatcac--gaggttaggagatggaga-------------------------------ccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027649 124 + 51301725 GGTACAACcacgtctttattaaaaatacaaaaatta-ggccaggcgcggtggctcacacctgtaatcccagcactttggaaggccaaggcaggcggatcac--gaggtcaggagatggaga-------------------------------ccatcc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45320343 156 + 49145316 ggtgaaaccctgtctgtagtaaaaatacaaaaatta--gctgggcatggtggcgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I e chlSab2.chr6 46741499 2703 + 50890351 I a score=471255.000000 s hg38.chr19_GL949753v2_alt 32413 226 + 796479 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggagggagaattgcttgaacccaggaggcagaagttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagactctgtctta----aaaaaaaaaaa----------------gcaaaGCCAAACCAAAGAAAT s panTro4.chr19 58969201 240 + 63644993 tggctaacatg-gcgaaaccccatctctacta--------------aaaacacaaacaattagccgggcgtggtggcgggcgcctgtagtcccaactactcgggaggctgaggagggagaattgcttgaacccaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggagacacagcaagact--gtctta----aaaaaaaaaaaaaaaaaaaaaaaaaaaGCAAAGCCAAACCAAAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55835876 226 + 60714840 tggctaacatg-gtgaaaccccatctctacta--------------aaaacacaaacaattagccaggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcgggaggattgcttgaacccaggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggtgacacagcaagactctgtcttt----aaaaaaaaaaa----------------gcaaagcaaaaccaaagaaaT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59891862 237 + 64156825 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg--aaaaaaaaaaaaa------ggaaaaaaaaacaaaGCAAAACCGAAGAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909258 235 + 59248254 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcgtggtggcgggagcctgtagtcccagctactcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcccaggcgacagagcaagactctgtcttg----aaaaaaaaaaa------ggaaaaaaaagcaaaGCAAAACCGAAGAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47027773 235 + 51301725 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aagtagccgggcatggtggcgggagcctgtagtcccagctactcgggaggctgcggaggaagaactgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcgacagagcaagactctgtcttg----aaacaaaaaaa------ggaaaaaaaagcaaagcaaaaccgAAGAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744202 238 + 50890351 tggctaacacg-gtgaaaccccatctctacta--------------aaaacacaaa-aaatagccgggcgtggtggcaggagcctgtagtcccagc-actcgggaggctggggaggaagaattgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggtggcagaacaagactctgtcttgaaaaaaaaaaaaaaa------gaaaaaaaaaGCAAAGCAAAACCGAAGAAAT i chlSab2.chr6 I 2703 C 0 s calJac3.chr22 45320499 231 + 49145316 tgggtaacaagagcgaaactccatctcaaaaaaaagaaaagaaaagaaaatacaaa-aactagccgggtgtggtg---ggcacttgaaatcccggctactcaggaggctgaggtaggagaatggcttgaatgcaggaggcagaggttgcagtgggcca----------actgcactccagcctgggcgacagagcgagactctatctca----aaaaaaaaaaa----------aaaaaagcaaaGCCAAACCAAAGAC-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I e nomLeu3.chr10 102598098 717 - 106955855 I a score=42582.000000 s hg38.chr19_GL949753v2_alt 32639 15 + 796479 GTGTGCATCAAAGAG s panTro4.chr19 58969441 15 + 63644993 GTGTGCATCAAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836102 15 + 60714840 GTGTGCATCAAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598815 15 - 106955855 GTGTGCATCAAAGAG i nomLeu3.chr10 I 717 C 0 s rheMac3.chr19 59892099 15 + 64156825 GTGTGCATCAAGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909493 15 + 59248254 GTGTGCATCAAGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028008 15 + 51301725 GTGTGCATCAAGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744440 15 + 50890351 GTGTGCATCAAGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320730 14 + 49145316 GTGTGTATCAA-GAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19474914 8 - 122678785 I a score=1852457.000000 s hg38.chr19_GL949753v2_alt 32654 571 + 796479 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAA---AGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCTTTATAGGTCTGAGatatatatatatatata--------atgt---------------------------------------------------------------------------------atatatgtatt s panTro4.chr19 58969456 586 + 63644993 TACAT------CTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTCCTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCGGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------ATATAATTTCAGACGATTAAAGGAAAAAGGTCATGAGGAGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACAAGCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAACGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatatatatatgtgttatgt---------------------------------------------------------------------------------atatatgtatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836117 580 + 60714840 CACATCTGAAGCTGCCCTTCTTACCTGTGACCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCCGTGAAGGGGAATTCAGCTTGGTTTTCTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTTGTTCACCTTGCACAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCCCGGCTTCAACCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCCTTGAGTACAAATCCAGCAGAGAATGTATGACTAGCTCGTTATAGGTCTGAGatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102598830 572 - 106955855 TACATCTGAGGCTGCCCTTCTCACCTGTGACCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTAGGCTTCAGGTCTGTGAAGGGGAATTCGGCTTCATTTTGTGCCGAGCTCTGTTCCTGCTTGTACCCAGAGTCGTTCACCTTGCGCAGCACAAATGTCACATTCTGGGAATGAGCCTGACACTTCAGGGTCACATTGCTCTCGGCTTCAACCACCG-AGCTGGGCCAGGCATGGAGGGAGGGCTTGGGCGGTTTCTCTGG-AAACAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGCGTGGGATGCAGGAATAAATAAAGTTTAAGTAGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GCCCTGGAAGAGAAATCTCAATGAGAGAAGAATTATGTGCTTGTCCCTGAGTACAAATCCAGCAGAGAACATATGACTAGCTCGTTATAGGTCTGAGatatagatatatgtatt-------------------------------------------------------------------------------------------------atgtatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892114 576 + 64156825 CACATCTGAGGCTA-CTTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCTGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCAAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54909508 576 + 59248254 CACATCTGAGGCTA-CCTTCTCACCTGTGATCACCAGCTCCAAGTGTTCACTGCTTTCCGACCCCTCACGGGAGGCTGTTGTCTTATAGGCACAAAAGTAGCTCCCAGCATCCTCAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCATTCACCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACCG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028023 658 + 51301725 CACATCTGAGGCTACCCTTCTCACCTGTGGTCACCAGCTGCAAGTGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTCTTCTGTCGAGAACCGTTCCTGCTTGTACCCAGAATCATTCACCTTGCGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCTTCAACCACTG-AGCTAGGCCGGGCGTGGAGGGAGGGCTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGATAATTTGAGT----------------------------CTAGAATT-CAGACGATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAggaataaataaagtttaaatgggagaaaactcaccattctttttctcatcttcgTAGCCCAGACACA-GTCCTGGAAGAGAAATCTcaatgagagaaaaattatgtgctTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAggtct--aatatatatatatgtatt--------atgtatatatgtattatgtatatatgtattatgtatatatgtgtacatatagttacacatatgtatatatgtattatatatatgtatatatgtatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46744455 577 + 50890351 CACATCTGAGGCTACCCTTCTCACCTGTGATCACCAGCTGCAAGCGTTCACTGCTTTCTGACCACTCATGGGAGGCTGTTGTCTTGTAGGCACAAAAGTAGCTCCCAGCATCCTTAAGCTTCAGGTCCGTGAAGTGGAATTCAGCTTCGTTTTCTGTCGAGAACTGTTCCTGCTTGTACCCAGAGTCGTTCTCCTTGAGCAGAATGAATGTCACATTCTTGGAAGGAGCCTGACACTTCAGGGTCACGTTGCTCCGGGCCTCAACCACCG-AGCTAGGCCAGGCGTGGAGGGAGGGTTTGGGCAGTTTCTCTGG-AAAGAATTCAGAGTTCATTTGAGT----------------------------CTAGAATT-CAGACAATTAAAGGAAAA-GGTCATGAAGTGTGGGATGCAGGAATAAATAAAGTTTAAGTGGGAGAAAACTCACCATTCTTTTTCTCATCTTCGTAGCCCAGACACA-GTCCTGGAAGAGAAATCTCAATGAGAGAAAAATTATGTGCTTGTCTTTGAGTACAAATCCAGCAGAGAACA-ATGACTAGCTCATTATAGGTCT--Aatatatatatatgtatt--------atgt---------------------------------------------------------------------------------atatatgtatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320744 584 + 49145316 CGCCTCTGAGACGGCCCTTCTCACCTGTGACCACCAGCTGCACGTGCTCACTGCTTTCTGACCACTGGTGGGAGACTGCTGTCTTGTAGGCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTGTTCGCGCTGGAATGCAGAGTCGTTCACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCG-AGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGG-AAAGAATTCAGAGTTAATTCGAGTCTGCATGTGGATG-------------GCCTGGAATT-CAGAGGATTCAAGAAAAA-GGTCATGAAATGTGGGGTGCAGGAATAA----AGTGTAAGTGGGAGAAAACTCACCGTTCTCTTTGTCATCCTCATAGCCCAGACACA-GCCCTGGAAGAGAAATGTCAAT--GAGAAGAATTACGCACTTGTCTTCGAGTACAAATCCAGCAGAGAAATCATGACCAGCTCGTTACAGGTCT--GATATGTATATA---ATA--------ATGC---------------------------------------------------------------------------------ATGTATTTtat i calJac3.chr22 C 0 C 0 s canFam3.chr1 19474922 598 - 122678785 ------TGAAGCTGCCTTTCTCACCTTTGACCTGCAGCCACAGGTGTTCACTCTCTTCTGACCACTCCTGGGAGACCATTGTCTTGTAGGCACAAAAGTACATCCCAGCATCCTTCGGCTCCAGGTGAGTGAGGAGGAATTCAGCCTCATGTCCTGTGGATCTCTGCTCCTGCCTGTACCCAGAGTCCTGCAGCTTCCCCAGCATGAATGTCACATTCTGGAAGTGAGACTGGCACCTGAGGCTCACGTTGCCTCTGTGTTCAACCATGT-TGCTGGGCAAGGCACTGAGCGTGGGTTTGGGAAGCATTTCTGGCAAAGAATTCAGAGTTAGTCTGACTCTTCATCATGACATCCACCAATGCCCTCCTAGAATT-CAGAGGATTAAAGAGAAA----------ATATAGGATGCAGGAACAGATAGAGTTTA--TGCGAGAAAACTCACCATTCTTTTTCTCGTCTTCAAAGCCCAGGGAAA-GCCCTGGAAGAGAAACCCTTATGAGACATAAATTACATACTCGTGTTTGAGTATATATCAGGCAGAGAGTGCATGACTAATTTGTTAAAGATCC--ATCTTATTTCTTTtttcttttaaagatttt---------------------------------------------------------------------------------atttatttatt i canFam3.chr1 I 8 I 134 a score=111275.000000 s hg38.chr19_GL949753v2_alt 33225 74 + 796479 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatatatatattaa---- s panTro4.chr19 58970042 70 + 63644993 atatata-ataaat--------------------------gtattaagtata----cacatattacatata---atacatatataaatataatacatatattaa---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836697 74 + 60714840 atatata-ataaat--------------------------gtattaagtatatgtacacatattacatata---atacatatataaatataatacatatattaa---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599402 74 - 106955855 atatata-ataaat--------------------------atattaaatgtatgtacacatattatacata---atacatatataaatataatacatatattaa---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892690 67 + 64156825 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910084 67 + 59248254 atacata-atacat--------------------------atattaac--tatgtacacatattacatata---atacatatataaatat-----atctattaa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028681 95 + 51301725 atacata-atacatatgtatatatgtataatacataatacatataaactatatgtacacatattacatata---atacatatataaatat-----atctattaa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745032 57 + 50890351 atacata-at------------------------------atattaactctatgtacat---------------gtacatatataaatat-----atctattaaatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321328 71 + 49145316 aaatgtacatacat--------------------------ata-------tatgcagatataatatagatatacataaatgcatatatgtgaattatatattat---- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475520 134 - 122678785 I a score=279390.000000 s hg38.chr19_GL949753v2_alt 33299 123 + 796479 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---ttcttc- s panTro4.chr19 58970112 125 + 63644993 atatatgtattacatatatgtatatatTTTTGGCAGATATCTCCCCAGACTTA---------CCTCTTACTTTTGGTTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCCCAGCAAC---ttcttc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836771 123 + 60714840 atatatgtattacatatatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTACGTGTATGGAGAAAATTCC-AGCAAC---TTCttc- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599476 122 - 106955855 acatatgtattacatatatgtatatatTTTTGGCAAATATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTAGGTGTATGGAGAAAATTCC-AGCAAC---ttctt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892757 121 + 64156825 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA----tttt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910151 122 + 59248254 atgtatgtattacatgtatgtatatatTTTTGGCAGCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTTTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAA---ttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028776 125 + 51301725 atgtatgtattacatgtatgtatatatttttggcagCTATCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCCATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATtcc-agcaactttttttt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745089 122 + 50890351 atgtatgtattacctgtatgtatatatTTTTGGCAGATGTCTCCCCAGACTTA---------CCTCTTACTTTTG-TTCTATTGTTTGTCATTCAGAAGCTATGTGTATATAGAAAATTCC-AGCAAC---ttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321399 64 + 49145316 atatttatattatgta-----atatatt------aaatgt------agacata-----------------tttta-------------------------cacatatatatat---atttt----------ttatt-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19475654 129 - 122678785 acgtaggtgttccATCCATCT---TATTTCTTGAAGGCACTTCTTTGGGTTGATTTTTTTAACCTGTTACTTATG-TCCCATTGTTTCTCATTTTGTATATTCATTTATATACAAAATTCC-AGCAAC---CTTTT-C i canFam3.chr1 I 134 C 0 a score=58119.000000 s hg38.chr19_GL949753v2_alt 33422 34 + 796479 tttcttttttttttttttttttt---gaaatgtagtc s panTro4.chr19 58970237 30 + 63644993 tttcttttttttttttttttttt----aaatgt---c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836894 37 + 60714840 tttctttcttttttttttttttttttgaaatgtagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599598 26 - 106955855 --------tcttttttttttttt---gagatgtagtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892878 26 + 64156825 --------tttttttttcttttt---gagatgtagtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910273 26 + 59248254 --------tttttttttcttttt---gagatgtagtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028901 26 + 51301725 --------tttttttttcttttt---gagatgtagtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46745211 26 + 50890351 --------tttttctttcttttt---gagatgtagtc i chlSab2.chr6 C 0 T 3728 s calJac3.chr22 45321463 26 + 49145316 --------ttttttttatttttt---gaaacggagtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=118469.000000 s hg38.chr19_GL949753v2_alt 33456 40 + 796479 ttgctc-tgttgcacaggctggagtgcaatgacatgatctc s panTro4.chr19 58970267 40 + 63644993 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836931 40 + 60714840 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599624 40 - 106955855 ttgctc-tgttgcccaggctggagtgcaatgacatgatctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59892904 40 + 64156825 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i rheMac3.chr19 C 0 I 222 s macFas5.chr19 54910299 40 + 59248254 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028927 40 + 51301725 ttactc-tgttgcccaggctggagtgcaatggcacgatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741509 40 + 50890351 ttgctc-tgtcgcctaggctggagtgcagtggcatgatctc i chlSab2.chr6 T 3728 C 0 s calJac3.chr22 45321489 41 + 49145316 tcgctcttgttacccaggctggagtgcaatggcgagatctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C a score=496418.000000 s hg38.chr19_GL949753v2_alt 33496 233 + 796479 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcccgagtagctgggactacag--gcacccgccaccacacctggctaatttttgcatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA s panTro4.chr19 58970307 233 + 63644993 agttcactgcaacctccgcctcccaggttcaagcaattttcctgcctcagcctcctgagtagctgggattacag--gcacccgccaccacgcctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcccccggc-cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55836971 233 + 60714840 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggactatag--gcacctgccaccacacctggctaatttttgtatttttagtagagac-agggtctcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgcgaggattacaggcgtgagccaccgctcccggc-cCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599664 233 - 106955855 agttcactgcaacctccgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagctgggactacag--gcacccgccaccacgcctggctaatttttatatttttagtagagag-agggtctcaccatgttggccaggctggtcttgaactcctgacctcagttgatccacacgcctcagcctcccaaagtgctgggattatagacgtgagccaccgtgcccggc-cCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54910339 231 + 59248254 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctccccagtagctgggactacag--gcgcccaccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgcctcggactcccaaagttctgggattacaggtacgagctaccgcacctggc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47028967 231 + 51301725 agttcactgcaacctccgcctcccaggtttaagtgattctcctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgaactcctggcctcaggtgatccgcctgccttggcctctcgaagttctgggattacaggtacgagctaccgcacctggc---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741549 232 + 50890351 agctcattgcaatctccacctcctgggttcatgtaattcacctgccttagcctcccgagtagctgggactacag--gcgcccgccaccatgcctggctaatttttgtatttttagtagagacaagagtctcaccatattggccaggctgatcttgagctcctggcctcaggtgatccgcctgcctcggcctcccaaagttctgggattacaggtacgagctaccgcacctggcc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45321530 233 + 49145316 agctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctccgcctcccaagtagctgagattacaggcgcgcacgccaccatgcccagctaatttttgtatttttagtagagac-ggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcagcctcccaaagtgctgggattacaggcttgagccactgcgcccagc-cTa i calJac3.chr22 C 0 I 1387 e canFam3.chr1 19475783 0 - 122678785 C e rheMac3.chr19 59892944 222 + 64156825 I a score=5001.000000 s hg38.chr19_GL949753v2_alt 33729 10 + 796479 GCAACCTTTT s panTro4.chr19 58970540 10 + 63644993 GCAACGTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837204 10 + 60714840 GCAACCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599897 10 - 106955855 GCAACCTTTT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C e papAnu2.chr19 47029198 0 + 51301725 C e macFas5.chr19 54910570 0 + 59248254 C e rheMac3.chr19 59892944 222 + 64156825 I a score=2100.000000 s hg38.chr19_GL949753v2_alt 33739 1 + 796479 C s panTro4.chr19 58970550 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837214 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599907 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893166 1 + 64156825 c i rheMac3.chr19 I 222 C 0 s macFas5.chr19 54910570 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029198 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475783 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46741781 0 + 50890351 C a score=264207.000000 s hg38.chr19_GL949753v2_alt 33740 98 + 796479 TGATGTATTGAATTGCTTTCATGAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG s panTro4.chr19 58970551 98 + 63644993 TGATGTATTGAATTGCTTTCACAAGTAATC---CTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG---------TG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837215 106 + 60714840 TGATGTATTGAATTGCTTTCATGAGTAATCCATCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTGGTATTTTCTGTGATTGCAG----ttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102599908 101 - 106955855 TGATGTATTGAATTGCTTTCACGAGTAATCCTTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAG---------TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59893167 110 + 64156825 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910571 110 + 59248254 TGATGTATTGAATTGCTTTCACAAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029199 110 + 51301725 tgatgtATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTatgcttttttcttgtattttctgtgattgcagtattttgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741781 110 + 50890351 TGATGTATTGAATTGCTTTCACGAGTAATCATTCTTTCACCATCTAGAAATTGTTCAACATTCACCTATGCTTTTTTCTTGTATTTTCTGTGATTGCAGTAttttgtttg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19475783 97 - 122678785 TGATCTATCATGTTGCTTTCACG----ATCAGTCTTTCACCATCTAAATATCATCACATATTTACTTGTATTTTCCTCTCCTGCTTTCTATGACTGAACTC--------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I a score=444076.000000 s hg38.chr19_GL949753v2_alt 33838 195 + 796479 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcagtctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt------------------------tgtagagatgggg s panTro4.chr19 58970649 192 + 63644993 ttttgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtggtactcgtacctcaggctccagagtagctgggactacaggtgtgtgccatcgtgcccagctaatttttgttgttgttgt---------------------------agagatgggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837321 219 + 60714840 tttcgttttgttttgagacagagtctcgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccccctgggttcaagtgatactcgtacctcagggtccagagtagctgggactaccggtgtgcgccatcacgcccagctaatttttgttgttgttgttgttgttgttgttgttgttgttgttgtagagatgggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102600009 198 - 106955855 ttttgttttgttttgagacagagtctcactgtgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcctccaccctctgggttcaagtgatacccgtacctcaggctccagagtagctgggactacaggtgtgtgccatcatgcccagctaatttttgttgttgttgt---------------------tgttgtagagatgggg i nomLeu3.chr10 C 0 M 1769 s rheMac3.chr19 59893277 195 + 64156825 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattcttgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------tgttgagatgggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910681 192 + 59248254 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgtggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---ttgttgttgttgt------------------------tgttgagatgggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029309 195 + 51301725 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcgtacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaattgttgttgttgttgt------------------------ttttgagatgggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46741891 186 + 50890351 ctttgtttcgttttgagacagagtctcgctgtgtcacccaggctggagtgcggtggtgcaatctcagctcactgcaacctcctacaccccctgggttcaagtgattctcatacctcagtctccagagtagctgggactacaggtgtgcaccacgatgcccaactaa---------ttgttgt------------------------tgttgagatgggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I a score=211757.000000 s hg38.chr19_GL949753v2_alt 34033 117 + 796479 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccaccgtgcccggccTGATTGCAGT s panTro4.chr19 58970841 117 + 63644993 tttcaccatgttgcccaggctggtctcaaactcctgagctcaagtgatccacccgcctcagcctcccaaagcgctgggattacaggcatgagccactgcacacggccTGATTGCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837540 117 + 60714840 tttcgccatgttgcccaggctggtctcaaactcctgagctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagaaaccgcgcccagccTGATTGCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893472 117 + 64156825 tttcaccatattgcccaggctggtctcaaactcctgacctcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54910873 117 + 59248254 tttcgccatattgcccaggctggtctcaaactcctgaccgcaagtgatccgtctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgaccTGATTGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029504 117 + 51301725 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgagattacaggcatgagccaccgtgcccgacctgaTTGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742077 117 + 50890351 tttcgccatattgcccaggctggtctcaaactcctgacctcaagtgatccatctgcctcagcctcccaaagtgctgggattacaggcatgagtcaccgtgcccgaccTGATTGCAGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19475880 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=75688.000000 s hg38.chr19_GL949753v2_alt 34150 45 + 796479 TTT-ACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA s panTro4.chr19 58970958 46 + 63644993 TTTTACCGTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837657 46 + 60714840 TTTTACCCTTGCCACTTAAATAATGCAAAGG----TTATTTTATCGTG----GT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59893589 46 + 64156825 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTGGA---- i rheMac3.chr19 C 0 I 4 s macFas5.chr19 54910990 44 + 59248254 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCGTG------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029621 44 + 51301725 TTTTACCCTTGCCACTTAAATAATGCAAACG----TTATTTTCCCATG------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742194 46 + 50890351 TTTTACCCTTGCCACTTAAATAATGCAAACA----TTATTTTCCCGTG--GA-- i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19475880 49 - 122678785 -TTCACCTTTGTCACTTAGATAACGCAATGGTTATTTATTTTACTGTG----GA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=2166.000000 s hg38.chr19_GL949753v2_alt 34195 3 + 796479 GTG s panTro4.chr19 58971004 3 + 63644993 GTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837703 3 + 60714840 GTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911034 1 + 59248254 --G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029665 1 + 51301725 --G i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475929 3 - 122678785 GTG i canFam3.chr1 C 0 I 1 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 34198 1 + 796479 A s panTro4.chr19 58971007 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837706 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54911035 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029666 1 + 51301725 A i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=33669.000000 s hg38.chr19_GL949753v2_alt 34199 155 + 796479 GAGTGGTGGGttttttttttt-----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaagctctgcctcccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta s panTro4.chr19 58971008 156 + 63644993 GAGTGGTGGGttttatttttta----------------------------------------tttttatttttcgagatggagtctcgctctgtcacccaggctagagtgcagtggcacgatctcggctcaccgcaagctctgccttccgggttcacgccattctcctgcctcggcctcccgagtagctgggacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55837707 195 + 60714840 GAGAGGTAGGTtttattttttgtatttatttatttatttatttatttatttatttatttatttatttattttttgagacggggtctcgctctgtcacccaggctggagtgaaatggctcgatctcggctcattgcaagctctgcctcccgggttcacaccattctcctgcatcaacctcacgagtag-tgggacta i ponAbe2.chr19 C 0 I 1515 e canFam3.chr1 19475932 1 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=14920.000000 s hg38.chr19_GL949753v2_alt 34354 164 + 796479 caggcacccgccaccaagcccagctaattaatttttttgtatttttagtagagacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc s panTro4.chr19 58971164 164 + 63644993 caggcacccgccaccacgcccaggtaattaatttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctcggactcccaaagtgctgggattacaggcatcagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19475932 1 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e papAnu2.chr19 47029667 0 + 51301725 C e macFas5.chr19 54911036 0 + 59248254 C e rheMac3.chr19 59893635 4 + 64156825 I a score=1704.000000 s hg38.chr19_GL949753v2_alt 34518 4 + 796479 GAGA s panTro4.chr19 58971328 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54911036 4 + 59248254 AAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029667 4 + 51301725 AAGG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19475933 4 - 122678785 GAGC i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M e chlSab2.chr6 46742240 4 + 50890351 I e rheMac3.chr19 59893635 4 + 64156825 I a score=141927.000000 s hg38.chr19_GL949753v2_alt 34522 92 + 796479 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG s panTro4.chr19 58971332 92 + 63644993 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTCCCAAATACTCTCCTCACTTTAGCTTTGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59893639 92 + 64156825 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i rheMac3.chr19 I 4 C 0 s macFas5.chr19 54911040 92 + 59248254 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029671 92 + 51301725 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATctgctcccccttccccatgtCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742244 92 + 50890351 GGAGGGTTTTCTTGCTCAATTCCAATAGAGAGAATCTGCTCCCCCTTCCCCGTGTCTTC--------------------------TGGTTCCAAGTACTCCCCTCACTTTAGCTTTGG i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19475937 116 - 122678785 AGAGGGTTTCCTCTCT-GATTCAAATGGGGAGAAACCACTCTCTCTGCCCAGGTTCTTCTTTTCATGAAGAATTTGAGACATTCATGGTCCTAAATGCCCTTTCCA-TGTGGCTTTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102600207 1769 - 106955855 M a score=690955.000000 s hg38.chr19_GL949753v2_alt 34614 360 + 796479 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCTGGGAAGGTAGCGTCTTAAACTTGGGTGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCCCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCAGCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCCAGGACTCAGGCTCTGTTTT s panTro4.chr19 58971424 360 + 63644993 TTTCCACTTACATTATCCCCTCCCTCTTCTATATTCTGTTCTCTACATTCCCTGCTGGGAAGGGAGCGTCTTAAACTTGGATGGAAA-ATGGGATGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTACGTAGAATTTAGGTAGAAATTCTCTAGG-GCCACGACAGTGTCTCAGGACATTGGTTCCTTGTT--GACACAGGTGCCGATACAG-AACGTGACCCCTCACCAAGCTTCACCACAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAAGCTGCGTTGGCACCGAGATTAGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGGTGGGCAGGGCATCCTAGGACTTAGGCTCTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602001 360 - 106955855 TTTCCACTTACATTATCCCCTCCCTCTTCTGTGTTCTGTTCTCTACATTCCCCGCCGGGAACGGAGCGTCGTAAACTTGGGTGGAAA-ACGGGATGTCAGTCATGGGGCTTGTTTCA-GGTGAAGTTACCTAGAATTTAGGTAGAAATTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTTCTTGTT--GACACAGGTGCCGATGCAGAAACGTGACCCCCCACCAAGCTTCACCGCAGAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGTGTTGGCAGCGAGATTCGCTGGGATTGGCAGGTAGGAAACAGCCTCTGCGTGGGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i nomLeu3.chr10 M 1769 C 0 s rheMac3.chr19 59893731 351 + 64156825 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTGAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911132 351 + 59248254 TTTCCACTTACATCATCCCCTTTCTCTTCTATGTTCTGTTCTCTATATTCCCTGCGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA-------GTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGACTGGGATTGGCAGGTAGGAAACAGCCTCTGAAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47029763 358 + 51301725 TTTCCACTTACATCATCCCCTCCCTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGGGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCACGAGAGTGTCTCAGGACATTGGTTCCTTGTT--GACGCAGGTACCGACGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGA-GCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAAATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742336 357 + 50890351 TTTCCACTTACCTCATCCCCTCCTTCTTCTATGTTCTGTTCTCTATATTCCCTGTGGAGAAGGGAGCGTCATAAACTTGCGTGGAAA-ATGGGACGTCAGTCATGGGGCTTGTTTCAGGGTGAAGTTAGGTAGAATTTAGGTAGAATTTCTCTAGA-GCCA--CGAGTGTCTCAGGACGTTGGTTCCTTGTT--GACACAGGTACCGAGGCAG-AACGTGACCCCACACCAAGCTTCACCGCAAAGGAATGAGGTGGAGGCCTCACGATGGACCGAGGCTGCGTTGGCAGCGAGATTGGCTGGGATTGGCAGGTAGGAAACAGCCTCTGGAT-GGCAGGGCATCCCAGGACTCAGGCTCTCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476053 342 - 122678785 TCTATATAAATGTTAGACCCTACTTCTCCTGTGTTCTGTTCTATGCATTTCATTCTGGAATAGAAAGGTCAT-TTCATGAATGGAAATATGGGAAACTAGTCTTGGGGTATGTCAAGAGGTGATGT---------------TAGAATTTCTCTAGATGCCA---GAGTGTCTCAGGATATCTGGCCTTTCTTTAAACTCAGGAGTCAACTCAC-AACATGGACCC---TCAAACTTCACCAAGAAGGAAGGAGATGGTGGCCTGATGATGCACTGAGTCTGAGTTTGCAGTAATAATGGTGGGAATTTGTAGTAGGAAAGCATCCTCTGGGTGGTCAGGGGGTCGTAGGTCTCATGGTCCCTTtt i canFam3.chr1 C 0 I 380 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=8022.000000 s hg38.chr19_GL949753v2_alt 34974 4 + 796479 GAGA s panTro4.chr19 58971784 4 + 63644993 GAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602361 4 - 106955855 GAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894082 4 + 64156825 GAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911483 4 + 59248254 GAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030121 4 + 51301725 GAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742693 4 + 50890351 GAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476395 380 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=178310.000000 s hg38.chr19_GL949753v2_alt 34978 82 + 796479 CCCTCCCCA-AATCCCGCTTTTAGATTCATGTCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA s panTro4.chr19 58971788 82 + 63644993 CCCTCCCCA-AATCCCGCTTTTAGACTCATGTCATCTCATCTCTGCTATCCACCCATCATCTGTTCAAACAGTGATTCCTATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602365 82 - 106955855 CCCTCCCCA-AATCCCGCTTTTAGACTTATATCATCTCATCTCTGCTATCCACCCATCGTCTGTTCAAACAGTGATTCCTATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894086 82 + 64156825 CCCTCCCCA-AATCCCTCTTTTAGACTCATGTCATCTCATCTCTGCTATCCATCCATCGTCTGTTCAAACAGTGATTCCTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911487 82 + 59248254 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030125 82 + 51301725 CCCTCCCCA-AATCCCGCTTTGAGACTCATGTCATCTCATCTCTgctatccatccatcatctgtTCAAACAGTGATtcctata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742697 82 + 50890351 CCCTCCCCA-AATCCCGCTTTTAGActcatgtcatctcatctctgctatccatccatcGTCTGTTCAAACAGTGATTCCTATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19476775 79 - 122678785 CTTTCCTCACAAACCTGCTTTTAGACTCATGTTGCCTCAGCTCTGGTATTAGCCAATATTCTGC----ACAGTGATTCCCTTA i canFam3.chr1 I 380 I 3401 e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=274299.000000 s hg38.chr19_GL949753v2_alt 35060 153 + 796479 ttcttttttctttttgagacagggtctcactctgtggcccaggctggagtgccagggtgcagtcacagctcactgcagcctcaacctcctgggctcaagtgatccatccatctcagcctcccaaataactgggactacaggcatgcaccacca s panTro4.chr19 58971870 152 + 63644993 ttcttttt-ctttttgagacagtgtctcactctgtggcccaggctggagtgccagggtgcagtcatagctcactgcagcctcaacctcctgggctcaagtgatccgcccatctcagcctcccaaataactgggactacagacatgcaccacca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602447 152 - 106955855 ttcttttt-ctttttgagtcagggtctcactctgtggcccaggctggagtgccgggctgcggtcacagctcactgcagcctcaacctcctcggctcaagtgatctgcccgtgtcagcctcccaaataactgggactacaggcacgcaccacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894168 152 + 64156825 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54911569 152 + 59248254 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47030207 152 + 51301725 ttcttttt-ctttttgagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46742779 152 + 50890351 ttcttttt-ctttttaagataggatctcactctgtggcccaggctggagtgctggagtgcagtcacagctcgctgcagcctcgacctcctgggctcaagtgatctgcctgtctcagcctcccaaataactgggactacaggcatgtgccacca i chlSab2.chr6 C 0 I 21 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=17655.000000 s hg38.chr19_GL949753v2_alt 35213 17 + 796479 cgct-ggctgattttaaa s panTro4.chr19 58972022 18 + 63644993 cgcccggctgatttttaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602599 18 - 106955855 cgcccggctgatttttaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894320 18 + 64156825 ggcccggctaatttttaa i rheMac3.chr19 C 0 I 7 s macFas5.chr19 54911721 18 + 59248254 ggcccggctaatttttaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47030359 18 + 51301725 ggcctggctaatttttaa i papAnu2.chr19 C 0 I 14 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e chlSab2.chr6 46742931 21 + 50890351 I a score=720109.000000 s hg38.chr19_GL949753v2_alt 35230 468 + 796479 atttttttgtagagatgaggactcacgatg------------------ttgcccaggctggtctcgaacacctgagttcaagtgattctcccaccttggcctcccaacatgctgggattacaggtgtgagctacctgcacccagccCAATTCCCATATTCtttttcttttctttttttttttt-tttttttgacatggagtctccctctgtcacccaggctggagggcagcggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccagtctggtctcaaactcctgacctcaagagatctgcccgcctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt s panTro4.chr19 58972040 455 + 63644993 atttttttgtagagatgaggactcagtatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattctcccaccttggcctcccaacatgctgggattacagatgtgagctacctgcacccagccCAATTCCCACAttctttttctttt--------------tttttttgacatggagtctccctctgtcacccaggctggagggcagtggtgctatcttagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtccttgccaccatgcccagctaa-tttttgtatttttattagagacggggtttcaccatgttggccagtctggtctcaaactcttgacctcaagagatctgcccacctgggcctcccaaagtcctgagattacaggcgtgagccaccacacctggctgatttgtgtttctt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102602617 460 - 106955855 atttttttgtagaggtgaggactcactatg------------------ttgcccaggctggtctcgaacacctgagttcaagcgattcttccaccttggcctcccagcgtgctgggattacaggtgtgagctacctgcacccagccCAATCCCCATAttctttttctttc--------ttttc-tttttttgatacggagtctccctctgttactcaggctggagtgcagtggtgctatctcagctcactgcaacctctgcctcccaggttcaa-gcgattttcctgcctcagcctcccgagtagctgggattacaggtgctcgcaatcatgcccagctaa-tttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagagatctgcccacctgggcctctcgaagtcctgagattacaggcatgagccaccacacccggctgatttgtgtttctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59894345 446 + 64156825 ttttttaagtagagatgggatttcaccatgnnnnnnnnnnnnnnnnnn------------------------tgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagctgatttgcgtttctt i rheMac3.chr19 I 7 C 0 s macFas5.chr19 54911750 452 + 59248254 ttttttttgtagagatgaggactcactgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcaaactcctgacctcgagagatctgcccacctgggcctcccaaagtcctgagattacaagtgtgagccaccacacccagcTGATTTGCGTTTCTT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47030391 467 + 51301725 ttttttttgtagagatgaggactcactgtg------------------ttgctcaggctggtctggaacacctgagctcaagcgattctcccacctcggcctcccaacatgctgggattacaggcatgagctacctgcAACCAGCCCAATTcccatattctttttctttttttttttttttttttttttttgagacggagtctcgctctgtca-ccaggctggagtgcaatggccggatcttcgctcactgcaagctccgcctcccgggttttacgccattct-ctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcccctttttctttttt i papAnu2.chr19 I 14 I 824 s chlSab2.chr6 46742952 451 + 50890351 ttttttttgtagagatgaggactcaccgtg------------------ttgcccaggctggtctggaacacctgagctcaagcgattctcccacctcggccttccaacatgctgggattacaggcatgagctacctgcaaccagccCAATTCCCATAttctttttc------------------tttttttgacatggaatctccctctgtcacccatgctggagtgctgtggtgttctctcagctcactgtaacctctgcctctcaggttcca-gcgattttcctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctgattttttgtatttttagtagagatggggtttcgccacg-tggccaggctgatctcaaactcctgacctcgagagatcttcccacctgggcctcccaaagtcctgagattacaggtgtgagccaccacacccagcTGATTTGCGTTTCTT i chlSab2.chr6 I 21 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I a score=104483.000000 s hg38.chr19_GL949753v2_alt 35698 83 + 796479 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgaccttatttgaaaatagcattgtctgatctttgcagatg s panTro4.chr19 58972495 83 + 63644993 gaaaagagaagttcaagttgtgactcccaggacctgcgaatgtgaccttatttgaaaatagcattatctgatctttgcagatg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102603077 82 - 106955855 gaaaagagaagttcaagttgtaactcccaggacctgcgaatgtgacctcatttgaaaataa-attatctgatctttgcagatg i nomLeu3.chr10 C 0 M 2026 s rheMac3.chr19 59894791 83 + 64156825 gaaaagagaagctcaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912202 83 + 59248254 GAAAAGAGAAGCTCaagttgtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743403 83 + 50890351 GAAAAGAGAAGCTCACGTTGtaactcccaggacctctgaatgtgaccttatttggaaataccattatctgatctttgcagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e papAnu2.chr19 47030858 824 + 51301725 I a score=135032.000000 s hg38.chr19_GL949753v2_alt 35781 170 + 796479 taattaattaaactaagatgaggtcatactagagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagacagagacacacagaaggaagacggccatgcgaagacagaggcagagaggccaggctgcaatcatagtgctttgggatgccaagata s panTro4.chr19 58972578 164 + 63644993 taattaattaaactaagatgcggtcataccggagtaggctgggtatctaatccaatataacttacaagaagagaaaaagagagaca------cgcagaaggaagacggccatgcgaagacagaggcagagaGGCCAGGctgcaatcgtagtgctttgggatgccaagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59894874 168 + 64156825 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gacacgcagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912285 166 + 59248254 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttacgagaagagaaagagagagaga--gaca--cagaaagaaggtggccatgcaaagacagaggcagagaGGCCAAGctgcaatcacagtgctttgggaggccgagata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46743486 168 + 50890351 taattagttaagctaagatgaggtcatactggagtaggcggggcatctagtccaatataacttatgagaagagaaaaagagagaga--gacacacagaaagaaggtggccatgcaaagacagaggcagagaGGCCAGGctgcaatcacagtgctttgggaggccgagata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e ponAbe2.chr19 55837902 1515 + 60714840 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e papAnu2.chr19 47030858 824 + 51301725 I a score=29359.000000 s hg38.chr19_GL949753v2_alt 35951 16 + 796479 ggagaattgcttgagc s panTro4.chr19 58972742 16 + 63644993 ggagaattgcttgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839417 16 + 60714840 ggaggattgcttgagc i ponAbe2.chr19 I 1515 C 0 s rheMac3.chr19 59895042 16 + 64156825 ggagaattgcttgagc i rheMac3.chr19 C 0 I 282 s macFas5.chr19 54912451 16 + 59248254 ggagaattgcttgagc i macFas5.chr19 C 0 I 281 s papAnu2.chr19 47031682 16 + 51301725 ggaggattgctcgagt i papAnu2.chr19 I 824 C 0 s chlSab2.chr6 46743654 16 + 50890351 ggagaattgcttgagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=231838.000000 s hg38.chr19_GL949753v2_alt 35967 140 + 796479 ccaggagttggagactagcctgggcaatatagcaagatcccatctct-----------aaaacagaaattattttaattagtccaacatggtg--gtgtgcacctgtagtcctagctgctcagaaggct-gcggggagg--------------actgcttgagctcag s panTro4.chr19 58972758 154 + 63644993 ccaggagttggagactagcctgggcaatatagcaagaccccatctct-----------aaaagagaaattattttaattagtccaacatggtg--gcgtgcacctgtagccctagctgctcagaaggct-gcggggggggggcgggggggggtactgcttgagctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839433 142 + 60714840 ccaggagttggagactagcctaggcaatatagcaagaccccatctct-----------aaaacagaaattattttaattagaccaacatggtggtgtgtgcacctgtagttctagctgctcagaaggct-gcggggagg--------------attgtttgagctcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895340 140 + 64156825 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i rheMac3.chr19 I 282 C 0 s macFas5.chr19 54912748 140 + 59248254 ccaggaattggagactagcctgggcaatctagcaagaccccatctct-----------aaaacagaaattactttaattagtccaacatggtg--gtgtgcacctgtagttctagcagctcagaaggct-gtggggagg--------------attgcttgagctcag i macFas5.chr19 I 281 C 0 s papAnu2.chr19 47031698 140 + 51301725 ccaggaattggagactagcctgggcaatctagcaagactccatctct-----------aaaacagaAATTACTTTAATTAGTCcaacatggtg--gtgtgcacctgtagttctagcggCTCAGAAGGCt-gcggggagg--------------attgcttgagctcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46743670 152 + 50890351 tcacgacttggagactagccttggcaatatagaaagaccccatcgctgcaaaaaaaaaaaaaaaaaaattattttaattagcccaatgtggtg--gtgtgcacctgtagttgtagctgctcagaaggctaatggggagg--------------attgcttgagcccag i chlSab2.chr6 C 0 I 2373 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M a score=503600.000000 s hg38.chr19_GL949753v2_alt 36107 421 + 796479 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aa-gaaaaaaaaaaacagagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgaggccagcctggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggtccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgattgaacccaggaggtggaggttgcagtgaga-aagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa s panTro4.chr19 58972912 420 + 63644993 gaggttgaggctgcagtgagctatggtagtaccactgcactccggcccgggcaactgagtgagaccctgtctaaagaa-------aa---aaagaaaaaaCAGagccaacgattggagtgatgcatctacaagttaaagaatgccgggagcgc--------tggctcacgcctgtaatctcaacagtttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacgtggtgaaatcctgtctctactaaaaatacaaaaattagccaggcatggtggcccatgcttgtaatcccagctacttgggaggctaaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagagcaagactccgcctc----aagaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839575 423 + 60714840 gaggttgaggctgcagtgagctatggtggtaccactgcactccggcctgggcaactgagtgagaccctgtctaaagaa-------aaaaaaaaaaaaaaaCACagccaacgattggagtgatgcatctacaagttaaagaatgccaggagcgc--------tggctcacgcctgtaatcccagcactttgggaggctgag----gcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcccatgcttgtaatcccagctacttgggaggctaagacaggagaattgcttgaacccaggaggtggaggttgcagtgaaccaagatcatgccactgcactctagcctgggtgacagagcaagactctgcctc----aaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895480 436 + 64156825 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaag----aaaaaaaaaaaaaaaaaaGACagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggtcaggagtttgagaccagcctggccaaaagggtgaaaccccgtctctactaaaaatacagaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagtattgcttgaacctgggaggtggcggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc-----aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54912888 441 + 59248254 gaggttgaggctgtagtgagctatggtggtaccactgcactccagcctg-gtgactgagtgagaccctgtctaaaaagaaaaaaaaaaaaaaaaaaaaaagacagccagcaatttgagtgatgcatctacaagttaaagaatgccaagagggcaggcacggtggctcaagcctgtaatctcaacactttgggaggctggggggagggggtggatcacctgaggttgggagttcgagaccagcctggccaacagggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccactgcactctagcctgggtgacagacagagactctgcctc----aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47031838 435 + 51301725 gaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgcgtgactgagtgagaccctgtcttaaaaa-----------aaaaaaaaagacagagccAGCAATTTGAGTGATGGATCTACAAGTTAAAGAATGCCAagagggcaggcatggtggctcaagcctgtaatctcaacactttaggaggctgcggggagggggtggatcacctgaggtcaggagttcgagaccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagctaggcgaggtggcccatgcctgtaatccaggctactcgggaggctaaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccactgcactctagcctgggtgacagacagagactctgcctcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19476854 3401 - 122678785 I e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=387013.000000 s hg38.chr19_GL949753v2_alt 36528 273 + 796479 aaaaaaa--------atgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagttctcagaaggaatcaacattgcaaacaccttggtttcagacttctcatctccccaacttaaagca-----attctaattcctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAACCCGATAGTCATCTCTAAGGC s panTro4.chr19 58973332 272 + 63644993 aaaaaaa---------tgccaagaattgtcagccatcactaga----agaggggcataaaacagacgctc--------cttcatagtcctcagaaggaatcaacattgcaaaccccttggtttcagacttctcatctccccaacttaaagca-----attctaattgctttaagccaccaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCCGATAGTCATCTCTAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55839998 280 + 60714840 aaaaaaaaaaaaaaaatgccaagaattgtcagccatcactaga----agaggggcataaaacagattct---------cttcatagccctcagaaggaatcaacattgccaacatcttggtttcagacttttcatctccccaacttaaagca-----attttaattgctttaagccactaggcttgtagtactttggtatggcagccATTGG-------------GGGATGAGGTCAGTCTCCTGGTTGCCCAGCTTACAGTGCTCAGCAGCTGGAGGCTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59895916 284 + 64156825 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgca-tttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTGT----------GAGCCCGATGGTCATCTCTAAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913329 285 + 59248254 aaaaaaa-aaacagaatgctaagaattgtcagccaccactaga----agaggggcataaaacagattctc--------cctcatagccctcagaaggaatcaacattgccaacactttggtttcagacttctcatctccccaactgcgagagagtgcattttagttgctttaagccatcaggcttgtagtactttggtatggcagccACTGG-------------GGGATGAGGTCAGCCTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCCGATGGTCATCTCTAAGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032273 285 + 51301725 aaaaaaa-aaaaagaatgccaagaATTGTCAGCCACCACTAGA----AGAGGGGCAtaaaacagattctc--------cctcataGCCCTCAGAAGGAATCAACATTGCCAACACTTTAGTTTCAGACTTCTCATCTCCCCAACTGCGAGAGAGTGCATTTTAGTTGCTTTAAGCCATCAGGCTTGTAGTACTTTGGTATGGCAGCCACTGG-------------GGGATTAGGTCAGCTTCCTGGTTGCCCAGCTTACTGTGCTCAGCAGCTGGAGGTTTGGGTAT----------GAGCCTGATGGTCATCTCTAAGGC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19480255 313 - 122678785 --------aaacaaggaacccagccctgccagctgtccccagaagcgaggggagcttggaatgaattctcccttggagcctcagagcattcaagaggaatttactcagctagcaccttgatcttggatctctggcctccagaactgtgggagagtagatttatgttgtgttaagccacttggtttgtggcactttgtcacagcagccctggaaatgaatacGGGCAGAGTGAGGTCAGTCTCTCGACTGCCCAGCTTATTCTGCTCTGTAGCTGGAGAGCTGGAGGTTTGGTGCATAGTGACTGACAGCCACCCCTAAAGC i canFam3.chr1 I 3401 C 0 e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=36527.000000 s hg38.chr19_GL949753v2_alt 36801 28 + 796479 ACAAATAgccgggtgcagtggctcacac s panTro4.chr19 58973604 28 + 63644993 ACAAATAgccgggtgcagtggatcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840278 28 + 60714840 ACAAATagctgggtgcagtggctcacgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896200 28 + 64156825 ACAAATAgccgggtgtagtggctcacgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913614 28 + 59248254 ACAAATAgccgggtgtagtggctcacgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032558 28 + 51301725 ACAaatagccgggtgtagtggctcacgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e calJac3.chr22 45321763 1387 + 49145316 I e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=252151.000000 s hg38.chr19_GL949753v2_alt 36829 166 + 796479 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaa--aaaattagccaggcgtggtggcgtgtgcctataatcccagcttctcgggaggcggagg s panTro4.chr19 58973632 166 + 63644993 ctgtaatcccagcactttaggaggttgaagtgggtagatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaa--aaaattagccaggcgtggtggcgtgtgcctgtaatcccagcttctcgggaggcggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840306 166 + 60714840 ctgtaatcccagcactttaggaggttgaagtgggtagatcacccgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctttactaaaaatacaa--aaaattagccaggcgtggtggtgcgtgcctgtaatcccagcttctcaggaggctgagg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59896228 166 + 64156825 ctgtaatctcaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913642 166 + 59248254 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcgtggtggtgcgcacctgtaatcccagcttctcgggaggctgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032586 166 + 51301725 ctgtaatcccaacactttaggaggttgaagtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaa--aaaattagccaggcatggtggtgcgcacctgtaatcccagcttcttgggaggctgagg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323150 166 + 49145316 CTGCGATCACTGGGTtttgggaggctgagacagaagaactgtttgagcccatgagtcagagactagcctgggcaatacagcaagaccccatctctaaaaaagaaattattttaattagcccagcatggtggtgtgcac--gtagttctagctgcccagaaggtttggg i calJac3.chr22 I 1387 C 0 e canFam3.chr1 19480568 0 - 122678785 C e nomLeu3.chr10 102603159 2026 - 106955855 M e chlSab2.chr6 46743822 2373 + 50890351 I a score=213147.000000 s hg38.chr19_GL949753v2_alt 36995 95 + 796479 caggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa s panTro4.chr19 58973798 95 + 63644993 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840472 95 + 60714840 caggagaatcgcttcaacccaggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605185 95 - 106955855 caggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctgggagacaaagcaagactctgtc------------aa i nomLeu3.chr10 M 2026 C 0 s rheMac3.chr19 59896394 107 + 64156825 tgggagaatcgcttgaacccaggaggtggcggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913808 107 + 59248254 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032752 107 + 51301725 tgggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacaccattgcactccagcctgggagacaaagcaagactctgtctcaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45323316 93 + 49145316 --ggaggattgcttgagcccaggaggttgaggctgcagtgagctatggtggtaccactgcactccagcctgggtgacagagtgagacccggtctc------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C e chlSab2.chr6 46743822 2373 + 50890351 I a score=54563.000000 s hg38.chr19_GL949753v2_alt 37090 27 + 796479 aaa-------aaaaaaaaa-------------aTGCTCATCTAAGGT s panTro4.chr19 58973893 26 + 63644993 aaa-------aaaaaaaaa--------------TGCTCATCTAAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840567 40 + 60714840 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605280 40 - 106955855 aaa-------aaaaaaaaaaaaaaaaaaaaaaaaGCTCATCTAAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896501 27 + 64156825 aag-------caaaaaaaa-------------aaGCTCATCTAAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913915 34 + 59248254 aaaaaaaagcaaaaaaaaa-------------aAGCTCATCTAAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032859 30 + 51301725 aagcaa----aaaaaaaaa-------------aagctcatctaAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746195 27 + 50890351 AAA-------AAAAAAAAA-------------CGGCTCATCTAAGGT i chlSab2.chr6 I 2373 C 0 s calJac3.chr22 45323409 26 + 49145316 aaa-------aaaaaaaaa-------------aaGCTAATCTAA-GT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480568 0 - 122678785 C a score=803292.000000 s hg38.chr19_GL949753v2_alt 37117 264 + 796479 GCAAATGTGTGTAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGACGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtaaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgAATACATCAGGTTCAATTGGAGGATGGTTAAAA s panTro4.chr19 58973919 264 + 63644993 GCAAATGTGTATAGGAGACGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAAGCAGATGAAGCACGTCGATGTC----------CACCGCACCCC-CCGTGCACCAGGgaggaactggggccttagggaggtggagctctgctgggtca-agcctagagtttctatgtagtgaagccgagattataa-cccaggtcatccgtttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840607 245 + 60714840 GCAAATGTGTGTAGGAGATGAGCATTACCCCACAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCATGTCAATGTC----------CACCACCCGCC-CCGTGCAcc-------------------agggaggtggagctctgctgggtca-agcctagagctcctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATGGTTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605320 263 - 106955855 GCAAATGTG-GTAGGAGACGAGCATTACCCCAAAAGGAAGGGCTGCACCCAGAAAAGGAGGAAGGAACTGAGGCAGATGAAGCTTGTCGATGTC----------CACCACACCCC-CTGTGCACCAGGgaggaactgaggccttaggcaggtggagctctgctgggtca-agcctagagcttctatgtagtgaagctgagattataa-cccaggtcttccttttcacagtgtgagctctgtctgaatacatcaggttCAATTGGAGGATCGTTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896528 263 + 64156825 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54913949 263 + 59248254 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCACATTGATGAC----------CACCACACCcc-ccatgcacca-ggaggaactggggccttagggaggtggagctctgctgggtca-agcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGGTTGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47032889 264 + 51301725 GCAAATGTGTGTGCGAGAGGAGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGAC----------CACCACACCCC-CCATGCACCAGGGAGGAACTGGGGCCTTAGGGAGGTGGAGCTCTGCTGGGTCA-AGCCTAGAGTTCCTAGGTAGTGAAGCCCACATTGTAA-CCCAGGTCTTCCTTTTCACAGTGTGAGCTCTGTCTGAATACATCAGGTTCAATTTGAGGATGGTTAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746222 263 + 50890351 GCAAATGGGTGTGCAAGAGGGGCATTACCCCACAGGGAAGGGCTGCACCCAGAAAAGGGGGAAGGAACTGAGGCAAATGAAGCGCATTGATGTC----------CACCACACCcc-ccatgcaccagggaggaactggggccttagggaggtgcagctctgctgggtca-ggcctagagctcctaggtagtgaagcccacactgtaa-cccaggtcttccttttcacagtctgagctctgtctgaatacatcaGGTTCAATTTGAGGATGG-TAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323435 250 + 49145316 GCAAATGTGTGTAGGAGAGTAGCATTACCCTGCAGGGAAGGGCTGCACCCAGAAAAGG-GGAAGGAACTGAGGCAG-TGAAGCATGTTGATGTC----------TACCACACCCCTCCATGCATCC-------------GCcttagggaggtggaactctgctgggtca-agcctagagctcctatgtagtgaagccaagactataa-cccagatcttccttctgacagtctgagctctgtctgattacatcaGGTTCAATCTGAGGATGGTTTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19480568 269 - 122678785 TCAAATGTGTGTGTGGGAGGAGCATTACCCCA-AAAGAAGGGCTGTA-TTGCAGAAGGAGGAAGGAACTACGGCAAATGACAAGTCCTGATAGCCTTTACACAACCCCTCACCCC-CAACTCACGAAAGAAGAACCAGAGTCTT-GGTCAGTGGAG--CTGCTGGTTCGTAGTCTAGGGCTCCTATGAGATCAAGCCAAGGTCATAATCCCAGGTCTTCATTT--ACAGGCTGAGGTCCCTTTGATTGCATCATGTTCAAGTTAAGAACAGTTAAAA i canFam3.chr1 C 0 I 176 a score=701660.000000 s hg38.chr19_GL949753v2_alt 37381 240 + 796479 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacttaaaatacaaaagtca-gccgggtgtggtggcctgcacctgtagtcccacctactcgggaggctgaggcaggagaatcgc s panTro4.chr19 58974183 240 + 63644993 TCAGCCTAAGAATCGAGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggggctcgagaccagcctgaccaacatggtgaaaccccgtctctacctaaaatacaaaagtca-gccgggtgtggtggcctgcacccgtagtcccacctacttgggaggctgaggcaggagaatcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55840852 240 + 60714840 TCAGCCTAAGAATCGAGCTGGTCACAAAATTGTCTTCTTGGggccaggtgtggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggttcaagacaagcctgaccaacatggtgaaaccccgtctctgcttaaaatacaaaagtca-gctgggtgtggtggcctgcacgtgtagtcccagctacccgggaggctgaggcaggagaattgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102605583 240 - 106955855 TCAGCGTAAGAATCGGGCTGGTCAGAAAATTGTCTTCTTGGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggggcttgagaccagcctgaccaacatggtggaaccccgtctctacttcaaatacaaaagtta-gccgggtgtggtggcgtgcacctgtagtcccacctactcgggaggctgaggcaggagaatcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59896791 240 + 64156825 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914212 240 + 59248254 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTTCTCTTGGggccaggcgtggtggcttatgcctgtaatcccagcacgttgggaggctgaagcaggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033153 240 + 51301725 TCAGCCTAAGAATCGGACTGGTCAGAAAATTGTCTtcttggggccaggcgtggtggtttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggCTTGAGagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggaggatcgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746485 240 + 50890351 TCAGCCTAAGAATCGGACAGGTCAGAAAATTGTTCTCTTGGggccaggtgtggtggcttatgcctgtaatcccagcactttgggaggctgaagcgggcggatcacctgagttcaggggcttgagagcagcatgaccaacatggtgaaaccctgtctctacttaaaatagaaaagtta-gccgggtgtggtggcatgtacctgtagtcccagctactcaggaggctgaggcaggagaatcgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45323685 241 + 49145316 TCAGCCTAAGTACAGAGCTGGTCAGAAAATTGTCCTCTTGGggccgggtgtggtggctcatgcctgtaatcccaccactttgggaggcagaggcaggcggatcacctgagatcaggggttcgagaccagcctgaccaacatggtgaaaccctgtctctacttaaaatacaaaaattaggccgggcacagtggctcacgcctgtaatcccaacactttgggatgccaagacaggcagatcac i calJac3.chr22 C 0 I 366 e canFam3.chr1 19480837 176 - 122678785 I a score=109663.000000 s hg38.chr19_GL949753v2_alt 37621 37 + 796479 ttgaacctgggagacggaggttgcagtgagcccagat s panTro4.chr19 58974423 37 + 63644993 ttgaacctgggagacggaggttgcagtgagcccagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841092 37 + 60714840 ttgaacccgggaggcggagattgcaatgagcccagat i ponAbe2.chr19 C 0 I 257 s nomLeu3.chr10 102605823 37 - 106955855 ttgaacctgggaggcggaggttgcagtgagcccagat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897031 37 + 64156825 ttgaacctgggaggtggaggttgcagtgagctgagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914452 37 + 59248254 ttgaacctgggaggtggaggttgcagtgagctgagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033393 37 + 51301725 ttgaacctgggaggtggaggttgcagtgagccgagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746725 37 + 50890351 ttgaacccgggaggtggaggttgcagtgagctgagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324292 37 + 49145316 ttgagcctgggaggcagaggttgcagtgagccaaggt i calJac3.chr22 I 366 C 0 e canFam3.chr1 19480837 176 - 122678785 I a score=88540.000000 s hg38.chr19_GL949753v2_alt 37658 37 + 796479 cacgccattgcactccagcctgggctacagagtgaga s panTro4.chr19 58974460 37 + 63644993 catgccattgcactccagcctgggctacagagtgaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605860 37 - 106955855 cacgccattgcactccagcctgggctacagagtgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897068 37 + 64156825 cacgccattgcactccagcctgggccatagagtgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54914489 37 + 59248254 cacgccattgcactccagcctgggccatagagtgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033430 37 + 51301725 cacaccattgcactccagcctgggccatagagtgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746762 37 + 50890351 cacaccattgcactccagcctgggccatagagtgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324329 37 + 49145316 cacaccattgcactacagcctggatgacagagtgaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 19480837 176 - 122678785 I e ponAbe2.chr19 55841129 257 + 60714840 I a score=47356.000000 s hg38.chr19_GL949753v2_alt 37695 19 + 796479 ctctgtctcataaataaaT s panTro4.chr19 58974497 19 + 63644993 ctctgtctcataaatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605897 19 - 106955855 ctgtgtctcataaataaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897105 19 + 64156825 ctctgtctcataaataaat i rheMac3.chr19 C 0 I 134 s macFas5.chr19 54914526 19 + 59248254 ctctgtctcataaataaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47033467 19 + 51301725 ctctgtctcataaataaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46746799 19 + 50890351 ctctgtctcataaataaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45324366 19 + 49145316 gcctgtctcgaaaaaaaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481013 19 - 122678785 ctatctctcatgaataaat i canFam3.chr1 I 176 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I a score=-7844.000000 s hg38.chr19_GL949753v2_alt 37714 16 + 796479 -GCatacatacataaat s panTro4.chr19 58974516 16 + 63644993 -acatacatacatacat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102605916 5 - 106955855 -aaata----------- i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 54914545 16 + 59248254 -aaaTACagagagagag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47033486 16 + 51301725 -agagagagagagagag i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 46746818 16 + 50890351 -aaaTACagagagagag i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45324385 1 + 49145316 --------------g-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481032 16 - 122678785 aaaatcttaaaaaaaa- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e rheMac3.chr19 59897124 134 + 64156825 I a score=-2337.000000 s hg38.chr19_GL949753v2_alt 37730 9 + 796479 -------aaataaata s panTro4.chr19 58974532 2 + 63644993 -------aa------- i panTro4.chr19 C 0 C 0 s macFas5.chr19 54914563 2 + 59248254 -------ag------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47033621 2 + 51301725 -------aa------- i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 46746838 2 + 50890351 -------ag------- i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19481048 9 - 122678785 aagaAAGAA------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55841129 257 + 60714840 I e calJac3.chr22 45324386 0 + 49145316 C e nomLeu3.chr10 102605921 2 - 106955855 I e rheMac3.chr19 59897124 134 + 64156825 I a score=12570.000000 s hg38.chr19_GL949753v2_alt 37739 12 + 796479 ----------aGAGAGAGAGAG s panTro4.chr19 58974534 7 + 63644993 ---------------gagagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841386 12 + 60714840 ----------agagagagagag i ponAbe2.chr19 I 257 C 0 s nomLeu3.chr10 102605923 12 - 106955855 ----------AGAGAGACAGAG i nomLeu3.chr10 I 2 C 0 s macFas5.chr19 54914565 12 + 59248254 ----------agagggagagag i macFas5.chr19 C 0 I 35 s papAnu2.chr19 47033623 12 + 51301725 ----------agaaggaaagaa i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 46746840 12 + 50890351 ----------agagagagggaa i chlSab2.chr6 C 0 I 27 s calJac3.chr22 45324386 12 + 49145316 ----------agagagaaagag i calJac3.chr22 C 0 I 1 s canFam3.chr1 19481057 20 - 122678785 AAAACCAATCTGAGGATAAG-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59897124 134 + 64156825 I a score=561156.000000 s hg38.chr19_GL949753v2_alt 37751 211 + 796479 ------AAGAAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGCGGCTGCAGACTCGGAGACCCCACAGCAGCTCTGCCTTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCCTCGCTTGCATGTGGGCGGCAGAACTCA--------- s panTro4.chr19 58974541 211 + 63644993 ------aagaaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCCTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGAGG-ATGGCAGTACTGCAGTATTTAGAGGCTGCAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGTGGCCTCCTCGTCGCTTGCATGCGGGCGGCAGAACTCA--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841398 210 + 60714840 ------aAATAAAATGTCTTTTTGCTCA--------------------------CAGCCTTG----------CACCCTGTAAATTCTTAA-------GCCCAG-CCTTCTCTATTCCGACGGAGGATG-ATGGCAGTACTGCGGTATTTAGTGGATACAGACTCAGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCTGTGTCTCTGCAGCGCGGCCTCCTTGTCACTTGCATGTGGGCAGCAGAACTCA--------- i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 102605935 210 - 106955855 ------AAGAAAATTGTCCTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGTCCTCCT-TATTCCGACGGAGGATG-ATGGCAATACTGCGGTATTTAGTGCATACAGACTCGGAGACCCCACCGCAGCTCTGCATTTCCCAGCGGAGTCTG----------TCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTGGCTTGCATGTGGGCGGCAGAACTCA--------- i nomLeu3.chr10 C 0 I 6 s rheMac3.chr19 59897258 217 + 64156825 ------AAGGAAATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCT--GCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i rheMac3.chr19 I 134 I 11 s macFas5.chr19 54914612 219 + 59248254 ------aaggaaaTTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCCTGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGCGGAGTAAGCA-AG--GCCTCCCCGTGTCTCCGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACGCA--------- i macFas5.chr19 I 35 I 2 s papAnu2.chr19 47033642 200 + 51301725 ------aaggaaattgtCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCAACGGAGGATGCATGGCAATACTGCGGTATTTAGCGGGTGCAGACTCGGAGAC--------------------CCCAGCGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTGGTCGCTTGCATGTGGGCGGCAGAACTCA--------- i papAnu2.chr19 I 7 I 2 s chlSab2.chr6 46746879 220 + 50890351 ------aaggaaATTGTCTTTTTGCCCA--------------------------CAGCCTTG----------CACCCTGTAGATCCTTAA-------GCCCAGCCCTCCTCTATTCCGACGGAGGATGCATGGCAATACTGCGGTATTTAGCGAGTGCAGACTTGGAGACCCCACCGGAGTTCTGCATTTCCCAGGGGAGTAAGCAGAG--GCCTCCCCGTGTCTCTGCAGCGCGGCCTCCTCGTCACTTGCAAGTGGGCGGCCGAACTCA--------- i chlSab2.chr6 I 27 I 11 s calJac3.chr22 45324399 217 + 49145316 ------aagaaaACTGACTTTTTGCCCA--------------------------TAGCCTTG----------CACCCCGTAGATTCTGAA-------GCCCAGCCCTC---TATGCCAAGGGAGGATGCATGACTGTGCTGCGGCATTCAGCAGAGACAGGCTGGGAGGTCCCACCGGAGCTCGGCACTGCCCAGCGGAGTAAGCAAGG--CTGCCCCTGTGTCTCTGCAGCATGGCCTCCTTGTGGCTTCCATGTGGGCAGCAGAACTCA--------- i calJac3.chr22 I 1 I 6 s canFam3.chr1 19481077 275 - 122678785 GCTGGTCAGAAAATTTTCTTTTCATTCATTGTCCCCAGACATAGCCCTTTTCTGTAGTCTTGGTCTGTACCCAAACCTACAGCTCCACACCCTATGTGCCCTGCCCTCCTATATGCCAACAAACATTC-ATGGCAAGACTG--ATATTTGGACAAATAAAGTTTGGAGAACTCATGGGAGCTCTGCATTTCTCAGCTGAGTAAACGAGGGTGTCACCCCACGTCTCTGAACCTCA--CTTCCCATCTCCTGTGTGCGAGCACCAGAACAGAGGCATGTCA i canFam3.chr1 C 0 C 0 a score=-565.000000 s hg38.chr19_GL949753v2_alt 37962 5 + 796479 CAGAA s panTro4.chr19 58974752 5 + 63644993 CAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841614 5 + 60714840 CGACG i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 102606151 5 - 106955855 CGACG i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 54914833 5 + 59248254 CAGGG i macFas5.chr19 I 2 I 4 s papAnu2.chr19 47033844 5 + 51301725 CAGGG i papAnu2.chr19 I 2 I 4 s calJac3.chr22 45324622 5 + 49145316 CGGTG i calJac3.chr22 I 6 C 0 s canFam3.chr1 19481352 2 - 122678785 TA--- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46747099 11 + 50890351 I e rheMac3.chr19 59897475 11 + 64156825 I a score=1488230.000000 s hg38.chr19_GL949753v2_alt 37967 477 + 796479 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACACCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA s panTro4.chr19 58974757 477 + 63644993 CCCACAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCCTGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTGCCACCCCCACACGAGTTTTTCTCATCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGCGGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAGAGG-CGGAGCGGGACTGGGCCGGCCGCAGCTCTCCGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATAGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGATAACTTCTTCCCCATGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCGAGCTGTGCCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55841619 477 + 60714840 CCCACAGCCCAGA-----CCCACCCACCACAGGTGTGCAACGCCTGGAAGTTGTTACTTCCACACACCGCATTTCCACCTGAACTTCCACTCCCACATGAGTTTTTCTCACCAGCCCAAGCCCATTCGTTCCAGTCCCGGA-GACTCACCGAGGCAAAGCAGGGAAAGTAATTCTGTAGTCATAGCGTCCCTTCTGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGAGGGACTGGGGCAGCCGCAGCTCTCTGGATGCCCGGTTCGTCCCCAGGATGTGCAGGTGGAGGAGGTTTTGCTCTGACACTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCATGAATCCGGTGTGTGTAGCCCCA-------CCCGCCCGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606156 478 - 106955855 CCCACAGCCCAGA-----CCCACCTACCGCAGGTGTGCAACGCATGGAAGTCATTACTTCCACACACCGCATTTCCACCTGGACTTCCACTCCCACATGAGTTTTCCTCACCAGCCCAAGCCCATTCGTCCCAGCCCTGGAGGACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTCTCCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACC-CTTCAAAGG-CGGAGCGGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCGTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCTCAGACACTGTGGTTCTCTGCC-CCACTCTTGCAGTTCCCTTCTCACAACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCCCCTGAATCCGGTGTGTGTGGCCCCA-------CCCGCCCAAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA-GTTTTCTGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897486 473 + 64156825 CCCCCAGCCCAGA-----CCCACCCACTGCAGGTGTGCAACGCGTGGAAGTCATTACTTCGACACACCGCATTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTGGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCACA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54914842 473 + 59248254 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCCGGACTGGGGCGGCCGCAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTGCCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGCGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTATCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47033853 467 + 51301725 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCATTACTTCCACACACCGCGTCTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCGGTCCTGGA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCACCTTCGGTTTT-ACCACTTCAAAGG-CGGAGCGGGACTGGG------GCAGCTCTCTGGCTGCCCGATTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACCGACTCAGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGcaaa i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46747110 472 + 50890351 CCCCCAGCCCAGA-----CCCACCCACCGCAGGTGTGCAACGCGTGGAAGTCGTTACTTCCACACACCGCGTTTCCACCCGGACTTCCACTCCCCCATGAGTTTTTCGCACCAGCCCAAGCCCATTCGTCCCAGTCCTGCA-GACTCACCGAGGCAAAGCAGGGAGAGGAATTCTGTGGTCATAGCGTCCCTTGGGCCAGAACCAAGGCCCCGCCTTCGGTTTTAACCACTTCAAAGG-CGGAGCGGGACTGGGGCGGC--CAGCTCTCTGGCTGCCCGGTTCCTCCCCAGGATGTGCAGATGGAGGAGGTTTTACCCTGACGCTCTGGTTCTCTGCC-CCACTCTTGCAGTTTCCTTCTCA-AACGGACTCGGGAAACAAGAAGCCGTCGATGACAACTTCTTCCTCATGAATCC--TGTGTGTGGCCCCA-------CCCGCCTGAGCTCTGTCCTACCTTCTCTGAAGTTCTG-CCAAGA---CTTCTGCAAA i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45324627 443 + 49145316 CTCGCAGCCCAGC-----CTCACCCACCACAGG---------CGTGGAAGTCATTCCTTCCAAACACGGCCTTTCCACCTGGACTTCC-------CCTGAG-------CCCCTGTCCAAGCCCACATGTCCCAGTCTTGGA-GACTCACCGAGGCAAAGCACGGAGAGGAATTCTGTGGTCATAGTGACCCTTCTGCCAGAACCAATACCCCACGCTTGGCTTT-ACC-CTTTGGAGG-TGGAGCGGGACTGGGGTGGCCGTGGCTCCCTGGCTA-CCGCTTCGTCCCCAGGCTGTGCAGGTGGA-GAGGCTTCGCCCTGACGCTCTGGTTCTCTACC----------CAGTTTCCTTCTCACAGCCGACTTAGGAAACAAGAAACCGTTGATGACAACATCTTCCCCATGAGTCTGGTGTGTGTGGCCCCA-------CCCGCCTGAGCCGAGTCCTGCCTTATCTGAAGTTCTG-CCAAGA-CTTTTCTGTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19481354 462 - 122678785 -CCACAGCCCACAAAACTCTGACAGGTAGCATGTGTCCAGTACACAGAAGACATCATTT----------------CACATCAACCCCCGCTTCACCGTGAA-TTTTCTCACCCACCCAAACCCATCTGTCCCAGTCCTGGA-GACTCACCAAGGCAAAGCAGGGACAGGAATTCTGTGAGCATAGTGTCCCTTCCACCCAGAACAAAATCCCGTCTTCAGTTTT-ATA-GTTCAAAGGAAGAAGGGGGACTGGGCCATC-GAGGCTCCCT-CCTGCCCACCTTGTCTCCAAGATGTGTGGGTA---AAGGTTTTACCCTGACACT-TGGTTCTCCACTGCCTGGTGTACAGTTTCCTTTTCACAATCAAGTCAGGAAA-------CCATCAGTGACAACATCTCCCTCATAAATCCGGTGTGTATGGCTCCAGCTCCACCCACCCTGAGACCTGTCCTATCTCATTTGAAGTCTTGACCAAGACATTTTCTTTAAA i canFam3.chr1 C 0 I 47883 a score=80697.000000 s hg38.chr19_GL949753v2_alt 38444 30 + 796479 TGTAATTTTTTATTTTAAAACACTAATACC s panTro4.chr19 58975234 30 + 63644993 TGTAATTTTTTATTTTAAAACACTAATACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842096 30 + 60714840 TGTAATTTTTTATTTTAAAACATTAATACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606634 30 - 106955855 TGTAATTTTTAATTTTaaaatattaatact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59897959 30 + 64156825 TGTAATGTTTTATTTTAAAGCGTTAATACC i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54915315 30 + 59248254 TGTAATGTTTTATTTTAAAGCATTAATACC i macFas5.chr19 C 0 I 367 s papAnu2.chr19 47034320 30 + 51301725 tgtaatgttttattttaaagcattaataCC i papAnu2.chr19 C 0 I 363 s chlSab2.chr6 46747582 30 + 50890351 TGTAATGTTTTATTTTAAAGCATTAATACC i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45325070 29 + 49145316 TGTAGT-TTTTATTTTACAACATTAATACC i calJac3.chr22 C 0 I 2055 e canFam3.chr1 19481816 47883 - 122678785 I a score=22893.000000 s hg38.chr19_GL949753v2_alt 38474 44 + 796479 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga s panTro4.chr19 58975264 44 + 63644993 ggccggacgcggtggctcacgcctgtaatcccagcaccttgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842126 44 + 60714840 ggccaggcgcggtggctcacacctgtaatcccagcactttgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102606664 44 - 106955855 ggccaggcgcggtggctcgtgcctgtaatcccagcactttgaga i nomLeu3.chr10 C 0 I 2757 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=38645.000000 s hg38.chr19_GL949753v2_alt 38518 154 + 796479 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtctctactaaaaatacaaaattagccaggcatggtggcgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg s panTro4.chr19 58975308 154 + 63644993 ggctgaggcgggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggagaaacccccgtgtctactaaaaatacaaaattagccaggcatggtggtgcatgcctgtaatcccagctactccggaggctgagacaggagaatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55842170 152 + 60714840 ggctgaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaccaaaatggataaa-ccccgtctcaattaaaaatacaaaattagctagccat-atggcgcacgcctgtaatcccagctactccagaggctgagacaggagaatGG i ponAbe2.chr19 C 0 I 4912 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=11238.000000 s hg38.chr19_GL949753v2_alt 38672 130 + 796479 cttgaacccaggaggcggaggttgctgtgagccaagattgtgccactgcactccagcctggacaacaacggtgaaactgtctcaaacaagcaaacaaacaaaCATTAATACCTATAGCTTTATAGCTTCC- s panTro4.chr19 58975462 131 + 63644993 cttgaacccaggaggcggaggttgctgtgagccaagattgcgccactgcactccagcctgggcatcaacggcgaaactgtctcaaacaagcaaacaaacaaaTATTAATACCTATAGCTTTATAGCTTCCT i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747612 11 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59897989 11 + 64156825 I a score=18125.000000 s hg38.chr19_GL949753v2_alt 38802 33 + 796479 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA s panTro4.chr19 58975593 33 + 63644993 GTGTACCCACTAGCCAGCTCCCCACAATGTTAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59898000 33 + 64156825 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i rheMac3.chr19 I 11 I 329 s chlSab2.chr6 46747623 33 + 50890351 GTGTACCCACTAGCCAGCTCCCCACAAGGTTAA i chlSab2.chr6 I 11 I 215 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I a score=79743.000000 s hg38.chr19_GL949753v2_alt 38835 906 + 796479 CCTTTTTTT------------GGGGGGCGGG--GGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcatgggtttaaggattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagagatgggatttcaccatgtgggccaggctggtcttgaactcctggtctctagtgacccgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataattacagtactttttttttttttttttttttttgagacagaatctctgtcagccaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccgagttgccgggatgacaggtgtccgccaccactcttggctaattttttttgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcgaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgagccaccacgcccggcgtatggcacattttcaaaaccagagactttgcactggcatcacacgtttaaccaggttccagaggtcactcagatctcaccagtttgtgcataattcgtttctctttttctcttccTCTTCCttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccCTTTTCTTTGCCTATGGGTATAGTTCTGTAACATTTTATTGCCTGTatgtatggctttatagaaccaccgccacaatcaagac s panTro4.chr19 58975626 919 + 63644993 CCTTTTTTTTGGCGGGGGGGGGGGGGGTGGGGCGGGgacagagtcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcatgggtttaatgattctcctgcctcagactcccaagtagctgggattacaagcatgcaccaccacacccagctaattttttgtagggatgggatttcaccatgtgggccaggctggtcttgaactcctggtctcaagtgactcgcccacctcagcctcccaaagtgctgggattacaggcataagccactgtgcccggccaatggtaatctcttataactacagtac-tttattttttatttttttttttgagacagaatctctgttgcccaagctggagtgcagtggttcaatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcccaagttgctgggatgacaggcgcccgccaccgctcttggctaatttttttcgttctttttagtagaaacgaggttttgccatgttgcccaggctggtctcaaacttctgacctcaggcgatccgcctgcctcggcctcccaaactgctgggattacaggcgtgaaccaccgcgcccggcgtatggtacattttcaaaaccagagactttgcactggcaccacacttttaaccaggttccagaggtcactcagatctcaccagtttcggcataattcgtttctctttttctcttccTCTtccttctatttctatttccttttctccttttccttcttttctcctgctcttcctcctcttccaccttcttttcctcctccGTTTTCtgtgcctatgggtatagttctgtaacattttattgcctgtatgtatggctttatagagccaccgccacaatcaagac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 39741 505 + 796479 acagaactgtcccaccaccacgtaggaactccctcatgctgcccctttataatcgctctcccaccctagcacctgctaatctgttctacgtctctatcactttgtcactttgagactcttgtataaatggaatcgtccatcgcctcaccttctgagggtgacctttttcactcagcacaatgcctgtgagattcattcaaatggttgtgtgtTATGATGATGGATACattagccgggcgtggtggcacacgcccatagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcacgccactgcactccagcctgggtcacagagcaagactccatcaaaaaaaaagaattatctaatggatacaatgtgtgtcactgggttagtggatacctgaaagccctaacttcatcattttggaatctatccatgcaataaagttacacttgtaccccataaaCGTAtacaa e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102606708 2757 - 106955855 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=9528.000000 s hg38.chr19_GL949753v2_alt 40246 361 + 796479 ataaaaaataatcgtctgggcatgatgacttaccgctgtaatcccagcactttgggaggctgaggcggga---------------------------ttacaggtgtgagcc---accatgcc---------cggccT-------------ATACTTTCTATCTTAATAACTACAAAAATAATAACTTGCTGGATGGGTCCCTGTGCCCA-CCCCGTCCT--GTCCTAAGTGAGGAGGATGGGAAGAA---AGCCATCGTCCTGTCCTGGTGCGGCTCTCAA-ACAGCTGGAAATGCTGGCTGCACAGGAAACT-CTAAGGATCGGCAGCTCTAGCGCATGCTACCCTTGGCAGCTGTGTGGTCTGTGGATAGAGAAGGACCAACCTGTGGTTAGTGG---AGGAAGAGGAGGAATATTGCTTT s nomLeu3.chr10 102609465 405 - 106955855 acaaaaattaa----ctgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcag---tgagccgagatcttgccattgcactgcagcctgggtgacagagtgagact--ccgtctcaaaaa--aaaaaagtatta--------ggtggctcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCAATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCAACCCATCATTCCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTT i nomLeu3.chr10 I 2757 T 1379 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 40607 578 + 796479 GATAAGCACATCCTCAGAGTTATAACAGAGGAGACAATAGTTATAAAATAAGAATGATATTTACGAAAAATAATAAGACTATTAACAAGAAACAGCAACAAATCTTGAAAACAAAATGTAACAACAAAACATAAATGTTGACtttttttttttttttttttttgagacggagtctcgctctgtcgcccaggctgcagtgcagtggtgagatctcggctcactgcaacctctgcctcccgggttccagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatattggccaggatggtctcgatctcttgaccttgtgatccgcccacctcggcctcccagagtgctgggattataggcatgagccacagcacctggcAACTGTTGACATTTTACATCTGCACCAGTAAGACTGGCTACCAATTACAAGCAAATGGATGCCATGGATAGAATGGAATTCCTGCCAAACTGGGTAAAATGTTGGAAACATATAAAATAAAATGTAAAAGAAATGT e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102609870 1379 - 106955855 T e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=74650.000000 s hg38.chr19_GL949753v2_alt 41185 850 + 796479 ATTATAAATACAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaagccaaggtgggcagatcacttgaggtcaggagttcgagaccagcctcgccaacatggtgaaaccccgtctctactaacacacaaaaattagccaggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagagtcacttgaacctgagagggaggttgcagtgagctgaaattacgccactgcactccagcctgggtgacagagtgagactccctctccaaaaaaaaa------gaaagaaagaaTGTATTATAAATACATATgaccaagcacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcacttgagtccaagagttcgagaccaagttgggccatatggtggaacccggcttctacaaaaaatacaaaatttagtccggcatgatggcacacacctgtggtcccagctactcagaaggctgagatgggaggattactttagcctgggaggtcgaggctgcagtgagccgtgatctagccactacactccagcctgggcgacagagtgagaccctgtctcaaaataaataaatataataaataaataaataTGTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAACGGAGAGGAAGTATTAATAAATATTACACAGGAAGCAATGTTTTTCCCTTCGTGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaaatgtattaagggctg s nomLeu3.chr10 102608491 852 - 106955855 ATTATAAATACAggctgggcatggtggctcatgcctgtaatcccagcactttgggaagctgaggtgggcagatcacttgatgtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaacacataaaaattagccgggcatggtggtgggcgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgagagggaggttgcagtgagctgaaattacaccactgcactccagcctgggtgaaagagcgagactccctctccaaaaaaaaaaaaaaagaaagaaagaaTGTATTATAAATACATATgaccaaacacagtggctaacgcctgtagtcctggcactttgggaggccaagatgagaggatcactcgagtccaagagttcgagaccaggttgggcaatatggtggaaccccgcttctacaaaaaatacaaaatttagccaggcgtgatggcacacacctgtggtcccagctactcagaaggatgagataggaggattgctttagcctgggaggtcgaggctgcagtgagccgtgatctagccactgcactccagcctgggtgacagagtgagaccctgtctcagaataaataaatataataaataaaTAG----GTATATCCCAATATTGGACTAAATGCTGGTCCAGAAGCACAAAATAGAAAGAATGGAGAGGAAGCGTTAATAAATATTATACAGGAAGCAATGTTTCTCCCTTCATGTGGAGGAAGAGTTCCCCGCAGGTGAGAGTCACCTACTACTCAATCTGACTCTGAAGTTTTAAGTATTGATTCAAGTTATCAAaagtgtattaagggctg i nomLeu3.chr10 T 1379 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e ponAbe2.chr19 55842322 4912 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=78705.000000 s hg38.chr19_GL949753v2_alt 42035 307 + 796479 ggcacggtgactcaagcctgcaatcccagcactttgggaggccgaggtgggctgatcacttgagctcaggtgttcaagaccagcctggccaacatgggtgaaaccccatctctactaaaagtacaaaaattagctgggcatggtggcaggcgcctgtaatcccagcgacttgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaagaaaaaaaaaaaaa------gtattacgtggc s ponAbe2.chr19 55847234 313 + 60714840 ggcacggtggctcaagcctgcaatcccagcactttgggaggccgaggtgggtggatcacttgagctcaggagttcaagaccagcctggccaacatgggtgaaaccctgtctctactaaaagtacaaaaattagctgggcgtggtggcaggcgcctgtaatcccagcgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgaaatcttgccattgcactgcagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaGTATTAGGTGGC i ponAbe2.chr19 I 4912 C 0 s nomLeu3.chr10 102609343 301 - 106955855 ggcatggtggctcaagcctgcaatcccagcactttgggaggcagaggtggggtgatcacttgagctcaggagttcaagaccagcttggccaacaccggtgaaaccccatctctactaaaagtacaaaaattaactgggcgtggtggcaggtgcctgtaatcccagcgactcgggaggctaaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagccgagatcttgccattgcactgcagcctgggtgacagagtgagactccgtctcaaaaaaaaaaa------------gtattaggtggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19481816 47883 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=32813.000000 s hg38.chr19_GL949753v2_alt 42342 83 + 796479 tcattgtgcccaattctgtcctctgtccccagtgaaaagtacaggaagaaGAAAGCCACCATCCTGCCCTACAGCAGATCCCA s ponAbe2.chr19 55847547 83 + 60714840 TCATTGTGCCCAGTTCTGTCCTCTGTCCCCAGTGAAAAGTACAGGAAGAAGAAAGCCACCATCCTGCCCTAGAGCAGATCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609644 83 - 106955855 tcattgtgcccagttctgtcctccgtccccagtgagaagtacaggaagaaGAAAGCCACCATCCTTCCCTAGAGCAGATCCCA i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529699 81 - 122678785 TCTTTATGCCCAGGTCTGTCCTCTGCCCCAGCTGAGGAGTACCG--AAGAGGAAACCATCATCTTGTCCTCAAGTACCTCTCA i canFam3.chr1 I 47883 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I e panTro4.chr19 58976545 0 + 63644993 C a score=146613.000000 s hg38.chr19_GL949753v2_alt 42425 232 + 796479 ACAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGAACAGAGCTGAGCTTAGAGGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG s panTro4.chr19 58976545 231 + 63644993 acagagcTGAGAGTGCAGGTTCCACAGCAGGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTATGGCTAGAGAAGGACAGAGCTGAGCTTAGAAGGGAAGGAAGAGGAGGAAGATTGTTTTCTCCCGGCATCTAAACACAGCTTTTCAACC-GGGGGAGCACCACCCTCACTTCCCATTGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847630 228 + 60714840 ATAGAGCTGAGAGTGCAGGTTCCACAGAAAGCGGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCTGGGCAGCTGTGGGATCTA-GGATAG---AGGACAGAGCTGAGCTTAGAGGGGAAGGAAGCGGAGGAAGATTGTTTTCTCCCGGCATCCAAACACAGCTTTTCAACCAGGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609727 232 - 106955855 ATAGAGCTTAGAGTGCAGGTTCCACAGAAAGCAGTTAAGGCTCAGCTGGTCCA-----------ACCCATCATT-CCCCGGGCAGCTGTGGGATCTATGGATAGAGAAGGACAGAGCTGAGCTTAGAGGGGAAGGAAGGGGATGAAGACTGTTTTCTCCTGGCATCCAAACACAGCTTTTCAACCACGGGGAGCACCACCCTCACTTCCCATCGCCC-CATCCAGGGATATTTGA-AAGGTATGAG i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19529780 234 - 122678785 ACAGGGGTGAGAATGAATGTTCCACTGGAAGCTGTTCAAGGTCAGTGGGTTTAACTGGATCAACACCCATCATTCCCCTGGGCAGCTAAGGAGCCTATAAGTACAGAAGGACAGAGAGAGGTC---AGGGGAGGGAGGAAGAGAAAGATTA-TTTCTCCTGGCCTCCAAACACAGGTTATCCACC------AGAAATACCCT-GCTCCGCATCATCTATATCTAGGGATGTCTGAGAAAGTAAAC- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e papAnu2.chr19 47034350 363 + 51301725 I e macFas5.chr19 54915345 367 + 59248254 I e rheMac3.chr19 59898033 329 + 64156825 I a score=15648.000000 s hg38.chr19_GL949753v2_alt 42657 22 + 796479 AGTAGTGGCTTTTTTGTTGTTG s panTro4.chr19 58976776 22 + 63644993 AGTAGTGGCTTTTTTGTTGTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847858 17 + 60714840 AGTAGCGGCTTTTTTGT----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609959 21 - 106955855 AGTAGTGGCTGTTTTGTTTGT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54915712 18 + 59248254 AGTAGTGGCTTTTTTTTC---- i macFas5.chr19 I 367 C 0 s papAnu2.chr19 47034713 17 + 51301725 AGTAGtggctttttttc----- i papAnu2.chr19 I 363 C 0 s canFam3.chr1 19530014 22 - 122678785 AGTACTTGTTTGTTTTTTTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46747656 215 + 50890351 I e rheMac3.chr19 59898033 329 + 64156825 I a score=346230.000000 s hg38.chr19_GL949753v2_alt 42679 132 + 796479 TTGTTTCACA-ATAATTAGGTCTCCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT s panTro4.chr19 58976798 132 + 63644993 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGACTATTGCACTTTAAACACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55847875 132 + 60714840 TTGTTTCACA-ATAATTAGGTCGTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGTAATGTTGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGGATTATTGCACTTTAAACCCCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102609980 132 - 106955855 TTGTTTCACA-ATAATTAGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTACGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59898362 132 + 64156825 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i rheMac3.chr19 I 329 C 0 s macFas5.chr19 54915730 132 + 59248254 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034730 132 + 51301725 ttgtgtcacA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTATTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46747871 132 + 50890351 TTGTTTCACA-ATAATTGGGTCTTCAACAGGTGTTCAATGGGAAAGGAAGTCTTAGCAATGTCGAGTTATGTGTTCCTATAATGGACAAGACAGTCTCACATGGTGAAGAACTATTGCACTTTAAACACGATT i chlSab2.chr6 I 215 C 0 s canFam3.chr1 19530036 123 - 122678785 -CCTTCCACCTTTAATGTCGGTTTTAGTTGGTGTTTTACAGGGAGGGAA--AATAG-------ATGCTAAGTGTTTCTATAACCAATGGGACAATCAAACATGGTAAAGAAATAATCTCACCTAAAGGCCATT i canFam3.chr1 C 0 I 103 e calJac3.chr22 45325099 2055 + 49145316 I a score=1132441.000000 s hg38.chr19_GL949753v2_alt 42811 504 + 796479 TGTggccatgcccggtggtgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccccgtctctcct---------------------------aaaaatac-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagccacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagccgagatcgcaccactgcactctggcctgggcgacaaagcgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaaaATACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT s panTro4.chr19 58976930 503 + 63644993 TGTggccatgcccggtggcgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctgaccaatgtggcgaaaccctgtctctcct---------------------------aaaaatac-----aaaaaaattagccggatggtggcaggtgcctgtagttgcagctactcgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaacgagccgagatcgcaccactgcactctggcctgggcgacagagcaagactctgtctcaaaacaaacaaacaaacaaaaaa-caaaAAATACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTATAGTCTGATGTTTAAAGAACCCCA-CATGgattgaatgcacagc-agggccgctacagttcacaaggctgcactgggtaattataatttgctaagaaggtggaccttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848007 531 + 60714840 TGTGGCCCCCCCcggtggcgcccccctttaatcccaccactttgggggggtgaggcagggggatcacttgaggccaggagtttgagaccagcctggccaatggggggaaaccctgttttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaaaaataagctggatggtggcaggtgcctgtagttgcagctacttgggaggctgaggcaggagaatcacttgaacctggcaggcggaggttgcaatgagctgagatcgcaccactgcactctggcctgggcgacagagtgagactctgtctcaaaacaaacaaacaaacaaaaaaacaaaAAATACCATTTGTGCCCATGTGGAGAAACATGTGAAGTCTCCATGGTAGAGTGTAATGTTTAAAGAACCCCG-TATGgattgaatgcacagc-agggcggctacagttcacaaggctgcaccgggtaattgcaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610112 500 - 106955855 TGTggccacgcctggtggcgcacacctgtaatcccagcattttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctggccaatgtagcgaaaccccgtctctact---------------------------aaaaatag-----aaaaaaattagccagatggtggcaggtgcctgtagttgcagctacttaggaggctgaggcaggagaatcacttgaacctggcaggcagaggttgcaatgagccgagattgcaccattgcactctggcctgggtggcagagtgagactctgtctcaaaacaaacaaacaaaaaaacaa-----aaaTACCTTTTGTGCCCATGTGGAGAAACATGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCATTATGgattgaatgcacagc-agggcggctacagttcacaaggctgcactgggtaattagaatttgctaagaaggtggatcttaaACAGAAAGGTCCATAAGCTAGATTGAGATAACCATT i nomLeu3.chr10 C 0 I 111 s rheMac3.chr19 59898494 495 + 64156825 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------caaaatac-----aaaaaaat-ggctgaatggtggcaggtgcccgtagttgcagccactcaggaggctgaggcaggagaatcacttgaccccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctca----aaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAATGTGTGAAGTCCCCATGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54915862 499 + 59248254 TGTggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattacaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47034862 491 + 51301725 tgtggtcaggcgcagtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaactccgtctctact---------------------------aaaaatac-----aaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagtgagagtctgtctca--------aaacaaacaaacaa----aaaataccatttGTGCCCATGTGGAGAAACGTGTGAAGTCCCCATGGCAGAGTCTGATGTTTAAAGAACCCCA-TATGGATTGAATGCACAGCAAGGGCAGATACAGATCACAAGGCTGCACTGGGTAATTGCAATTTGCTAAGAAGGTGGATCCTAAACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748003 504 + 50890351 TGTggtcaggcgcagtggcatatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggccaggaggtcgagaccagcctggccaatgcggcgaaattccgtctctact---------------------------aaaaatacaaaaaaaaaaaat-ggctgaatggtggcaggtgcctgtagttgcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagccgagatcgtgccactgcactctggcctgggcgacagagcgagagtctgtctcaaaacaaacaaacaaacaaacaa----aaaaTACCATTTGTGCCCATGTGGAGAAACGTGGGAAGTCCCCACGGTAGAGTCTGATGTTTAAAGAACCCCA-TATGgattgaatgcacagcaagggcggatacagttcacaaggctgcactgggtaattgcaatttgctaagaaggtggatcctaaACAGAAAGGTCCATAAGCTAGATTGAGATAATCAC- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=99728.000000 s hg38.chr19_GL949753v2_alt 43315 43 + 796479 GTCACAATGAGTGAAATTTCTTCCTCGGCACACAATTAATTAC s panTro4.chr19 58977433 43 + 63644993 GTCACAATGAGTGAAATTTCTTCCTCGGTACACAATTAATTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848538 43 + 60714840 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610723 43 - 106955855 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTAC i nomLeu3.chr10 I 111 T 111 s rheMac3.chr19 59898989 43 + 64156825 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916361 43 + 59248254 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035353 43 + 51301725 GTTACAATTAGTGAAATTTCTTCCTTGGTACACAATTCATTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748507 43 + 50890351 ATTACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=4108.000000 s hg38.chr19_GL949753v2_alt 43358 4 + 796479 TTAG s panTro4.chr19 58977476 4 + 63644993 TTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848581 4 + 60714840 TTAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59899032 4 + 64156825 TTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916404 4 + 59248254 TTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035396 4 + 51301725 TTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748550 4 + 50890351 TTCG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e nomLeu3.chr10 102610766 111 - 106955855 T a score=167865.000000 s hg38.chr19_GL949753v2_alt 43362 68 + 796479 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT s panTro4.chr19 58977480 68 + 63644993 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848585 68 + 60714840 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGATAATCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102610655 68 - 106955855 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCTACATTGTGACAATCAT i nomLeu3.chr10 T 111 T 111 s rheMac3.chr19 59899036 67 + 64156825 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916408 67 + 59248254 TTAGTAGGAAAGTTCCCAG-AGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATAATCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035400 68 + 51301725 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTCCATTAGCTACATTGTGATCATCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748554 68 + 50890351 TTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCATTAGCTACATTGTGATAATCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442165.000000 s hg38.chr19_GL949753v2_alt 43430 195 + 796479 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACCCGTAGGCTTATGGGGGTATA s panTro4.chr19 58977548 195 + 63644993 GTCACAATTAGTGAAATTTCTTCTTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGGTGGATCTTAAACAGAAAGGTTCGTTAGCT-ACATTGTGATACTCATGTCACAATCAATGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAAGTTTCCCCACCCGTAGGCTTATGGGGGTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848653 195 + 60714840 GTCACAATTAGTGAAATTTCTTCCTTGGTACACAATTAATTATTTAGTAGGGAGGTTCCCAGAAGATGGATCTTAAACAGAAAGATTCATTAGCT-ACATTGTGATAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGTAGGAGGGTTCCCCACTCGCAGGTTTATGGGGGTATA i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 102610612 195 - 106955855 GTCACAATTAGTGAACTTTCTTCCTTAGTACACAATTAATTACTTAGTAGGAAAGTTCCCAGAAGGTGGATCTTAAACAGAAAAGTCCATTAGCT-ACATTGTGACAATCATGTCACAATTAGTGAAATTTCTTCCTTGGTACACAATAAATTACTTAGCAGGAGGGTTCCCCACTCGTAGGTTTATGGGGGTATA i nomLeu3.chr10 T 111 C 0 s rheMac3.chr19 59899103 194 + 64156825 GTCA-AATTAGTGAAATTTCTTCGTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916475 195 + 59248254 GTCACAATTAGTGAAATTTCTTCCTTGGTGCAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTGAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035468 195 + 51301725 GTCACAATTAGTGAAATTTCTTCCTTggtgcaaaataaattatttagtagGAAAGGTCCCAGAAGGTGGATCTTAAAGAGAAAAGTCCATTAGTT-ACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGCAGGAGGGTTCCCCACTTGTAGGTTTATGGGGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748622 191 + 50890351 GTCACAATTAGTGAAATTTCTTCCTTGGTACAAAATAAATTATTTAGTAGGAAAGGTCCCAGAAGGTGGATCTTA-----AAAAGTCCATTAGTTAACATTGTGATAATCACATCACAATTAGTGAAATTTCTTCCTTGGCACACAATAAATTACTTAGTAGGAGGATTCCCCACTTGTAGGTTTATGGGGGTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=110265.000000 s hg38.chr19_GL949753v2_alt 43625 63 + 796479 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt s panTro4.chr19 58977743 63 + 63644993 ATTGATAAATCAAAATGGAAtatatcaaaacatcacgttgtacacaaatataactccattttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102610807 60 - 106955855 ACTGACAAATCGAAATGGAAtatatcaaaacatcatgttgtacacaaatataactccatt--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899297 63 + 64156825 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54916670 63 + 59248254 ATTGACAAATCAAAATGGAAtatataaaaacatcacgttgtacacaaatataattccattttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47035663 63 + 51301725 ATTGACAAATCAAAATggaatatatcaaaacatcacgttgtacacaaatataattccattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748813 63 + 50890351 ATTGACAAATCAAAATGGAAtatatcaacacatcacgttgtacacaaatataattccattttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e ponAbe2.chr19 55848848 9 + 60714840 I e calJac3.chr22 45325099 2055 + 49145316 I a score=493674.000000 s hg38.chr19_GL949753v2_alt 43688 207 + 796479 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGAAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt s panTro4.chr19 58977806 207 + 63644993 atttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCATATCTCTACAGCAGCCCATGGAAGAGAGAGGGGATCCGTGTTTTAACTTGGATCtgttactggaaagaggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggtgagtacacagagtaaagtgaaggcaagtttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55848857 207 + 60714840 GTTTGTTGATTAGATCTCAATAAATCTGGAGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCTGTGTTTTAACTTGGATCtgttactggaaaggggtcccagtccagaccccaagagagggttctcggatctcacacaagtaagaactcagggcgagtacacagagtaaagcgaaagcaagtttatt i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 102610867 205 - 106955855 -tttgtcgattagatctcaataaatctggaGCAGAAGAGAATTCCGTATCTCTACAGCAGCCCAGGAAAGAGAGAGGGGCTCCATTTTTTAACGTGGATCtgttactggaaagggttcccagtccagaccccaagagagggttcttggatctcacacaagaaagaactcagggcgagtccacggagttta-tggaagcaagtttatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899360 207 + 64156825 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i rheMac3.chr19 C 0 I 317 s macFas5.chr19 54916733 207 + 59248254 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcgagtccacggagtgaaatgaaagcaagtttatt i macFas5.chr19 C 0 I 407 s papAnu2.chr19 47035726 207 + 51301725 atttgtcgaTTAGATCTCAATACATCTAGAGCAGAAGAGAATTCCCTATCTCTACAGCAGCCCATGAAAGTGAGAGGGGCTCCGTGTTTGAACTTGGATCTGTTATTGGAAAGGGGTCCcagtccagaccccaagagagggttctcgGATCTCAGACAAGAAAGAACTCAGGGCGAGTCCAcggagtaaagtgaaagcaagtttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46748876 207 + 50890351 atttgtcgattagatctcaatacatctagaGCAGAAGAGAATTCCCTATCCCTACAGCAGCCCATGAAAGAGAGAGGGGCTCCGTGTTTTAACTTGGATCtgttattggaaaggggtcccagtccagaccccaagagagggttctcggatctcagacaagaaagaactcagggcaagtccacggagtgaagtgaaagcaagtttatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=830533.000000 s hg38.chr19_GL949753v2_alt 43895 341 + 796479 aagaaagtcaaggaatatggctgctccataggcagagcagtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc s panTro4.chr19 58978013 341 + 63644993 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcagtcggctatttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagtccctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtggcggtaggagtgtcttttagcatgcaaatgcattataattagcaaataatgcgcagtgaggacgaccagaagtcacttttgttgccatcttggatttggcaggttttggctggcttctttgttgcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849064 341 + 60714840 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctatttttatggttatttcttgatcatatgctgaacaaggggtggactgttcatgagttttccaggaaaggggaggggattttcctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagttgtcttggtgccagtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacgaccagaagtcacttctgttgccatcttggatttggcaggttttggctggcttctttattgcatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611072 341 - 106955855 aagaaagtcaaggaatatggctgctccataggcagagcggtccagagggctgtcggtcggctgtttttgtggttatttcttgatcgtatgctaaacaaggggtggactgttcatgaattttccaggaaaggggaggggatttccctggaactgagagttcctccc-tcgtttagcttctggaagttgccatggcatctgtaagctgtcttggtgctggagggagtgtcttttagcatgcaaatgcatcataattagcaaataatgtgcagtgaggatgaccagaagtcacttttgttgccatcttggatttggcaggttttggctgacttctttattgcatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59899884 342 + 64156825 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcagctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i rheMac3.chr19 I 317 C 0 s macFas5.chr19 54917347 342 + 59248254 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggtcggctatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaagggcaggggatttccctggaactgagagttcctccctttttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaaggcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i macFas5.chr19 I 407 C 0 s papAnu2.chr19 47035933 341 + 51301725 aagaaagtcaaAGACGATGgctgctccataggcagagcagtccAGAGGGCTGTCGGTCGgctatttttgtggttatttctcGATCATATGCTAAGCAAGGGGTGGACtgttcatgagttttccaggaaaggggaggggatTTCCCTGGAACTGAGAGTTCCTCCC-CCTATTAGCTTCTGGaagttgccatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcaaatgcattataattagcaaataatgtgcagtgaggacaaccagaagtcactattgttgccatcttggttttggcaggttttggctggcttctttattgcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749083 341 + 50890351 aagaaagtcaaggactatggctgctccacaggcagagcagtccagagggctgtcggccggcgatttttgtggttatttctcgatcatatgctaaacaaggggtggactgttcatgagttttccaggaaaggggaggggatttccctggaactgagagttcctcct-ccttttagcttctagaagttgctatggcatctgtaagccgccttggtggtggtgggagtgtcttttagcatgcagatgcgttataattagcaaataatgtgcagtgaggacaaccagaagtcacttttgttgccatcgtggttttggcaggttttggctggcttctttattgcatc i chlSab2.chr6 C 0 I 26 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=7736.000000 s hg38.chr19_GL949753v2_alt 44236 11 + 796479 tttg--tgtcttt s panTro4.chr19 58978354 11 + 63644993 tttg--tgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849405 11 + 60714840 tttg--tgtcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611413 11 - 106955855 tttg--tgtcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900226 13 + 64156825 tctcttttttttt i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54917689 12 + 59248254 tctc-tctttttt i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47036274 11 + 51301725 tctc--ttttttt i papAnu2.chr19 C 0 I 11 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I e chlSab2.chr6 46749424 26 + 50890351 I a score=366991.000000 s hg38.chr19_GL949753v2_alt 44247 144 + 796479 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagcctcaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- s panTro4.chr19 58978365 144 + 63644993 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctct---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849416 148 + 60714840 gggtctttgtgacctgtgtgttgtgacccgtctcatcgtgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccggccccggttcaagatggagtcactctggtttgaaggcctctgaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611424 148 - 106955855 gggtctttgtgacctgtatgttgtgacctgtctcatcctgtgacttagaaagccttaaccccctgggaatgcagtccagcaggttgcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctccgaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900250 148 + 64156825 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54917712 148 + 59248254 gggtctttgtgatctgtatgttgtaacctgtctcatcctgtgacttagaaagtcttaaccccctgggaatgcagtccagcaggtagcagcctcagtttacccagccccggttcaagatggagtcactctggtttgaaggcctctgaca i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47036296 148 + 51301725 ggGTCTTTGTGATCTGTATGTTGTgacctgtctcatcctgtgacttagaaagTCTTAACCCCCTGGGAATGCAGTCCAGCAGGTtgcagcctcagtttacccagcCCCggttcaagatggagtcactctggtttgaaGGTCTCTGACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46749450 148 + 50890351 gggtctttgtgatctgtatgttgtgacctgtctcatcctgtgacttagaaagtcttaaccccctgggaacacagtccagcaggttgcagcctcagtttacccagccccagttcaagatggagtcactctggtttgaaggtctctgaca i chlSab2.chr6 I 26 C 0 e canFam3.chr1 19530159 103 - 122678785 I e calJac3.chr22 45325099 2055 + 49145316 I a score=442040.000000 s hg38.chr19_GL949753v2_alt 44391 157 + 796479 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTACGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA s panTro4.chr19 58978509 157 + 63644993 gaTTCACCTGGAGACACATTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTACGAAGTTACCCAGGGAGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849564 157 + 60714840 GATCCACCTGGAGACACCTTCCGGCTGTACCAGGCCTCCACCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTCGATGTGGTATCTGGGGGAACTGAAAGAGAGAAGGGTCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611572 157 - 106955855 GATCCACCTGGAGACAACTTCCGGCTGTACCAGGCCTCCATCAGGAAAGCTCCCATGATAACCACAATTATGGCAGCCAGACCCAGTTGTATGAAGTTACTCAGGGTGTAGTTGCTCGATGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900398 157 + 64156825 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54917860 157 + 59248254 GATCCACCCGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036444 157 + 51301725 GATCCACCTGGAGACACCTTTCTGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAACCAAAATCATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGAGAGAAGGGGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749598 157 + 50890351 GATCCACCTGGAGACACCTTTCGGCTGTGCCAGGCCTCCACCAGGAAAGCTCCCATGATAATCAAAATTATGGCAGCCAGACCCAGTCGTATGAAGTTACCCAGGGTGTAGTTGCTTGACGTGGTACCTGGGGGAACTGAAAGTGAGAAGGGGCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19530262 157 - 122678785 GATCCTTGTGGAGAATCCTCCTGGCTATACCAGGCTTCAGCCAGCAAAATCCCAGTGATAATCAGAAACATGGTAATGAGACACAGCGGGATGAGGTTAACCTTGGTGTAATCCCCCAATGTGGCACCTGGGAAAACTGAAAGAGAGAATGAGATCA i canFam3.chr1 I 103 C 0 e calJac3.chr22 45325099 2055 + 49145316 I a score=256651.000000 s hg38.chr19_GL949753v2_alt 44548 78 + 796479 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC s panTro4.chr19 58978666 78 + 63644993 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTGTCAT-CACCCACTTAATGTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849721 78 + 60714840 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCACCAAATCTGACTATCAT-CACCCACTTAATGTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611729 77 - 106955855 GCACTGACCCTCAGA-GGTATCCCTCCTTCTCAAATGGCCCCGCCAAATCTGACTCTCAT-CACCCACTTAATGTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900555 78 + 64156825 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918017 78 + 59248254 GCACTGACCCTCAGAGTGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036601 78 + 51301725 GCATTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCActtaatgttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749755 78 + 50890351 GCACTGACCCTCAGAGGGTATCCCTCCTTCTCAAATGGCCCCGTCAAATCTGACTGTCAT-CACCCACTTAATGTTTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327154 78 + 49145316 gCACTGACCCTCAGAGCGTATCCCTCCTTCTCAAACAGTCCCGCCAAATCTCTCTCGCAT-CAGCCACTTCATGTCTTC i calJac3.chr22 I 2055 C 0 s canFam3.chr1 19530419 67 - 122678785 TCACTG-----------GTATCCCTTCTTCTCAAATAGGTCTACCGAATGTGACTCTCACACACCCACTT-GTGTTTCC i canFam3.chr1 C 0 I 1673 a score=849774.000000 s hg38.chr19_GL949753v2_alt 44626 300 + 796479 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccaggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcc s panTro4.chr19 58978744 300 + 63644993 -------------------------GG----ttttttggtttttttttttgagacggagttttactcttgttgaccaggctggagtgcagtggtgtaatctcagctcaccacaacctctgcctcccgggttcaagc---ctccctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccagctaa--ttttatatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55849799 306 + 60714840 -------------------------GGGGttttttttgtgttttttttttgagacggagttttgctcttgttgaccaggctggagtgcagtggtgtaatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggcgtgtgccaccatgcccggctaa--ttttatatttttagtagagacggggtttcgccatgttggtcaggctggtcttgaactcccgacctcaggtgacccgcccacctcagcctcccaaagtgctgggattaca-gtgtaagccacagcgcctcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102611806 303 - 106955855 -------------------------GG----Gtttttttgttttgtttttgagatggagttttgctcttgttgcccaggctggagtgcagtggtgcaatctcggctcaccacaacctctgcctccccggttcaagcaattctcctgcctcggcctcccaagtagctgggattatgggcatgtgccaccatgcccggctaa--ttttttatttttagtagagatggggttttgccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgggagccactgctccttgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900633 299 + 64156825 -------------------------gg----ttttgggg----tttttttgagacagaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcaggctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918095 299 + 59248254 -------------------------GG----TTTTGGGG----tttttttgagacggaattttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcccgggttcaagcaattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagcccagctaa--ttttatatttttagtagagacggggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036679 299 + 51301725 -------------------------gg----ttttgggg----tttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtacaatctcagctcactgcaacctctgcctcccgggttcaagcaattttcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccaagtccagctaa--ttttatatttttagtagagacagggttttgccatgttggtcaggctggtctcaaactcccaacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatacccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46749833 300 + 50890351 -------------------------GG----TTTTGGGG---ttttttttgagacggagttttgctcttgttgcccaggctggagtgcaatggtgcaatctcagctcaccgcaacctctgcctcccggattcaagcaattctcctgcttcagcctcccaagtagctgggattataggcatgtgccaccaagcccagttaa--ttttatatttttagtagagacggggttttgccatgttggtcagactggtctcaaactcccaacctcagttgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgaaccaccacacctggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327232 328 + 49145316 TAGCCAGCAGTCCACTGTACTTTAAAG----TGtttttttttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcacgtgccaccatgcccagctaagtttttgtatttttagtagagatggggtttcaccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcggcctcccaaagtgctgggattattggcgtgagccaccgcgcccggcc i calJac3.chr22 C 0 T 345 e canFam3.chr1 19530486 1673 - 122678785 I a score=96224.000000 s hg38.chr19_GL949753v2_alt 44926 33 + 796479 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT s panTro4.chr19 58979044 33 + 63644993 ACCCACTTAATGTTTTCTAGCCAGTAGTCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850105 33 + 60714840 ACCTACTTAATGTTTTCTAGCCGGTAGTCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612109 33 - 106955855 ACCCACTTAATGTGTTCTAGCCGATAGTCCACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59900932 33 + 64156825 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918394 33 + 59248254 ACCCACTTAATGTTTTCTAGCCAGTCGTCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47036978 33 + 51301725 accCACTTAATGTTTTCTAGCCAGTCGTCCACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750133 33 + 50890351 ACCCACTTAATGTTTTCTAGCCACTCGTCCACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327215 33 + 49145316 AGCCACTTCATGTCTTCTAGCCAGCAGTCCACT i calJac3.chr22 T 345 I 312 e canFam3.chr1 19530486 1673 - 122678785 I a score=1562945.000000 s hg38.chr19_GL949753v2_alt 44959 595 + 796479 GTACTTTAAAGTTTTAATT-----------------GAACttttt-------ttttttcttgagatcaagttttgctcttgttgcccagactggagtgtaatggcacaatctcagctcactacaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacgcagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcgaactcctgg s panTro4.chr19 58979077 594 + 63644993 GTACTTTAAAGTTTTAATT-----------------CAACttttt-------ttttt-cttgagatcaagttttgctcttgttgcccagattggagtgtaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgtctcagcctcccaagcagctgagattatgagcatgtgccaccacacccggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccacccgccttggcctcccaaagtgttgggattataggcataaaccaccatgcctggccATAAT-TGAGCTCTTTA-AAGTTTTAATCCCTGAAAACAAAAGATGGAATCt---ttgttgttgtt--tttgagacgacgtctcactctgttgctcaggctggagtgcagcgacacagtctcggttcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctaggattacaggcacctaccaccacacccggctaattttt-----------------gtatttttaatagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850138 594 + 60714840 GTGCTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttcagatagagtttcgcttttgttgcccaggctggagtgcaatggcacaatctcggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagcagctaagattacgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-tggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtaatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccATAAT-TGAACTCTTTA-AAGTTATAATCCCTGAAAACAACAGATGGAATCt---ttgttgttgtt--tttgagacaaagtctcgctctgtcgctcaggctggagtgcagagacaaaatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgccaccacacccggctaattttt-----------------gtatttttagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102612142 591 - 106955855 GTACTTTTATGTTTTAATT-----------------GAACttttt-------ttttt-cttgagatggagttttgcttttgttgcccagactggagtgcaatggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcctgagcagctaagattatgagcatgcgccaccacacctggctaattt-tgtatttttagtagaga-cggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccATAAT-TGAACTCTTTA-AAGTTTTAATCCCTGAAAACAACAGATGGAATCt------ttgttgtt--tttgagatggagtctcgctctgtcacccaggctggagtgcagcgacacaatctcggctcactgcaccctccacctcctgggttcgagtgattctcctgcctcagcctcccgaatagctgggactacaggcacctgccatcacacccggctaattttt-----------------gtattttcagtagagatgggttttcgccatgttggccaaactggtttcaaactcctgG i nomLeu3.chr10 C 0 M 1602 s rheMac3.chr19 59900965 580 + 64156825 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagacta------ggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttattgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54918427 586 + 59248254 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcaacctcccgagtagctgggattacaggcataagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccatgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacctgtcaccacgcctggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037011 586 + 51301725 GTACTTTAAAGTTTTAAtt-----------------gaactttgt-------ttttt-gttgagatggagttttgctcttgttgcctagactagagtgtggtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgattatcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccgactaatttctgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgaggcaccatgcccagccataat-tgaactcttta-aaattttaatccctGAAAACAAAAGATGgaatctttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctctcgaatagctgggattacaggcatctgtcaccatgtccggctaattttg-----------------gtatttttagtagagatgggttttcttcatgttggccaaactgatttcgaactcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750166 582 + 50890351 GTACTTTAAAGTTTTAATT-----------------GAACtttgt-------ttttt-cttgagatggagttttgctcttgttgcccagactagagtgcagtggcacaatctcagctcactgcaacctctggctcccgggttcaagcaattctcctgcctcaacctcccgagtagctgggattacaggcatgagccaccatgcccggctaattt-tgtatttttagtagagaggggggtttctccatgttggttgggctggtcttgaactcctgacctcaggtgatctgcccaccctggcctcccaaagt-------------gcatgagccaccgtgcccagccATAAT-TGAACTCTTTA-AAATTTTAATCCCTGAAAACAAAAGATGGAATCtttgttgttgttgtt--tttgagaccaagtctcgctctgttgctcaggctggagtgcagtggcacaatcttggcttactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgaatagctgggattacaggcacctgtcaccacgcccggctaattttg-----------------atatttttagtagagatgggttttcttcatgttggccaaactgatttcgaa---ctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45327560 626 + 49145316 GAACTTTAAAGTTTTAATCCCTGAAAACAAGAGACGGAATCttttgttgttgttgtt-gttgagatggagtctccctc-tgttgcccaggctggagtgcagtggcacaatcctggctcactgcaacctccacctcccaggttcaagcaatgctcctgcctcagcctcctaagtggctgagattacaaatgcccgccagcatgcctggctgatttttgtacttttagtagaga-tgacttttcaccatgttggccacactaatctcgaacttctggcctcaggtgacccagcagcctcggcctcccaaagtgctgtgattacgggcatgagccaccgcacctggccAAAATATGGAATCTTAATGAGTTGTAGT----------------GGGAGTTCCttttctttttatttgtctgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagttcactgcaacctctgcctcccaggttcaagtgattcccctgcctcagcttcccgagtagctggaactacaggtacacaccaccacgcctggctagttttgtgtgtgtgtgtgtgtgtgtatttttagtagaggcggggttttaccatattggccaggctggtcttgaactcctga i calJac3.chr22 I 312 C 0 e canFam3.chr1 19530486 1673 - 122678785 I a score=98551.000000 s hg38.chr19_GL949753v2_alt 45554 43 + 796479 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat s panTro4.chr19 58979671 43 + 63644993 cctcaagtgattcgcctgcctcggcctcccaaggtgctgggat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55850732 43 + 60714840 cctcaagtgattcgcctgcctcggcctcccaaagtgctgggat i ponAbe2.chr19 C 0 I 5965 s rheMac3.chr19 59901545 43 + 64156825 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919013 43 + 59248254 ccttaagtgattcgccggccttggcctcccaaagtgctgggat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037597 43 + 51301725 cctcaagtgattcgtctgcctcggcctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750748 43 + 50890351 cctcaaatgattcacctgcctcagcctcccaaagtgctgggat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328186 41 + 49145316 cctca--tgatctgcccgcctcggcctcccaaagtgctgggat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=57794.000000 s hg38.chr19_GL949753v2_alt 45597 45 + 796479 tacaggcctgagccaccgcgcccggccAAGATATGCAATCCTAAT s panTro4.chr19 58979714 45 + 63644993 gacaggcatgagccaccgcgcccagccAAGATATGCAATCCTACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901588 45 + 64156825 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919056 45 + 59248254 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037640 45 + 51301725 gacaggcatgagctaccgcacctggccaaaacatGGAATCCTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750791 45 + 50890351 gacaggcatgagccaccgcacctggccAAAACATGGAATCCTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328227 27 + 49145316 tataggtgtgagccactgtgcctggcT------------------ i calJac3.chr22 C 0 C 0 e canFam3.chr1 19530486 1673 - 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=588117.000000 s hg38.chr19_GL949753v2_alt 45642 295 + 796479 GAGTTGTAATGGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGCACATGAGACGGAAGGAGCTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCCCACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacgcctgtaatcccagc s panTro4.chr19 58979759 295 + 63644993 GAGTTGTAATCGGAG-TTCCTTTATCTTCCTTCCTTGATATTCACTCCACCTTAGCTCTCTTCCTTCATTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTCCCGCATCCTTATGTTAAGGAATAGTCTT-GGGGCAGTACATGAGACGGAAGGAGTTCTACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTCGCAGCACACACTGCTGTGCA-GCAGTGCACCTGAGAAAGTTTGAGTT--GAggccgggcacagtagc--tcacacctgtaatcccagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901633 297 + 64156825 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919101 297 + 59248254 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037685 297 + 51301725 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACattgcc-ttttctccttccccatcCTTATATTAAGGAATAGTCTTGGGGGCAGCACATGAGACAGAAGGAGCTCCACAGAGCCCCGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTgagtt--gaggccaggcacagtggc--tcacacctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46750836 297 + 50890351 GAGTTGTAGTGGGAG-TTCCTTTATCTTCCTTCCTTGACATTCACTCCACCTTAGCTCTCTTCCTTCGTTTATTTGCTCTTTATCCCATTTCCACCTTCCCACATTGCC-TTTTCTCCTTCCCCATCCTTATATTAAGGAATAGTCTTAGGGGCATCACGTGAGACGGAAGGAGCTCCACAGAGCCCTGAA----TTCCGTGGCTGGATCAG-------CATCCTTGCAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGTT--GAggccgggcacagtggc--tcacacctgtaatgccagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328254 289 + 49145316 ---------TGGGAG-TTCCTGTATCTTCCTTCCTTGATATTCTCTCCACCTTAGCTGTCTTCCTTCATTTATTTGCTCTTTGTCCTATTCGCACCTTCCCACACTCCCTTTTTTTCCTTCCCCATCCTTATATCAATGAATAGTCTCAGGAGCAGCACATGAGAGGGAAAGAGCTCCACAGGGCCCCGAA----TTCCGTGGCTGGGTCAG-------CATCCTCACAGCACACACTGCTGTGCAGGCAGAGCACTTGAGAAAGTTTGAGGT--GAggccgggcacagtggc--ccgcgcccgtaaccccagc i calJac3.chr22 C 0 C 0 s canFam3.chr1 103183131 308 + 122678785 GAGTTGTAGTGGGGTCTTCCTTTGCCTTCTTCCCTCTGTGTTCTCTCTGCTTTATCTCTCTTCTTGTGTTTCTTTGCTCTTCATCTCATTTCCACCCTCCCACACTGCC-ATTTCCCCTTCTCCCTCCTTGTGGTAGGAATCAGGCTTAGGAGGAACCCCTACAACCCAAGTTGCTGCACAGAGCGCTGAAGTACCTCAGTGGCTGCGTCTGCTCCCCTCCTCCTGCCAAGACTTACTGCCG-----CCAGGGAGCTCAAGAAGACTCAAGCTTAGAGGCTGAGCATCAGGACCACCATGCATTTCATTTCAGC i canFam3.chr1 T 1206 I 1686 e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=358693.000000 s hg38.chr19_GL949753v2_alt 45937 210 + 796479 actgtgggaggctaaggtaggaggattgcttgaggccaggagtttgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc s panTro4.chr19 58980054 210 + 63644993 actgtgggaggctaaggtgggagaattgcttgaggccaggagttcgagagcagcctgggcaacatggcgaaaccccatgtctactaaaaatacaa------------aaaaattagccgggtgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaattacttgacctgggcctggggttg-gggggtggaggctgcagtgagctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59901930 210 + 64156825 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcccgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacggagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919398 210 + 59248254 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggtaacatagcaaaaccccatgtctactaaaaatacaa------------aatacgtagccaggtgtggtggcgggtgcctgtaatcccagctactccggaggctgaggcaggagaatcacttgacccgggcctggggttg-ggagttggaggctgcagtgagccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47037982 210 + 51301725 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcaagagcagcctgggcaacatagcaaaaccccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctataatcccagctactccggaggctgaggcaggagaatcgcttgacctgggcctggggttg-gggggtggaggctgcagtgagccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751133 210 + 50890351 actgtgggaggctgaagtgggaggattgcttgaggccaggagttcgagagcagcctgggcaacatagcaaaagcccatgtctactaaaaatacaa------------aaaaagtagccgggtgtggtggcgggtgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgacccgggcctggggttg-gggggtggaggctgcagtgagccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328543 223 + 49145316 actgtgagaggccgaggcgggaggattgcttgaggctgggagctcgagaccagcctgggcaacatggtgaaaacccatctctactaaaagtacaaaaaaaaaaaaacaaaaattaactgggagtagtggagggtgcgtgtaatcccagctacttgggaggctgagacaggagaatcgcttgacccaggcctggggggatgggggcaggggctgcagtgagccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M a score=136595.000000 s hg38.chr19_GL949753v2_alt 46147 119 + 796479 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaagaaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata s panTro4.chr19 58980264 119 + 63644993 agattgtgccactacactccagcttgggcgacagagtgagactccatctcaaataaaacaaacaaacaaacaaaaccctagcctccagattttcagggaggctgatttgagtaataata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902140 112 + 64156825 agattgtgccactacactccagctcatgtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaCCCTAGCCTGCAGattttcagggaggctgatttgagtaataata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919608 112 + 59248254 agattgtgccactacactccagctcaggtgatagaatgagactccatctcaaagaa-------aaacaaacaaaaccctagcctgcagattttcagggaggctgatttgagtaataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038192 116 + 51301725 agattgtgccactacactccagctcaggtgatagagtgagactccatctcaaagaa---aaacaaacaaacaaaaccctagcCTGCAGATTttcagggaggctgatttgagtaataata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45328766 112 + 49145316 ggatcgtgccactgcactccagcttgggcatcacagtgagactccatctcaaagaa-------aagcaaacaaaaccctaacctccagattttcagggaggctggttggagtaataatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=20907.000000 s hg38.chr19_GL949753v2_alt 46266 24 + 796479 aaactctgattggccaggtgcagt s panTro4.chr19 58980383 24 + 63644993 aaactctgattggccaggtgcagt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59902252 24 + 64156825 aaactctgatgggccaggtgcggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919720 24 + 59248254 aaactctgattggccaggtgcggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038308 24 + 51301725 aaactctgattggccaggcgcggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e nomLeu3.chr10 102612733 1602 - 106955855 M e chlSab2.chr6 46751343 0 + 50890351 C a score=30516.000000 s hg38.chr19_GL949753v2_alt 46290 23 + 796479 ggctcatgcctgtaatcccagca s panTro4.chr19 58980407 23 + 63644993 ggctcatgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102614335 23 - 106955855 ggctcacgcctgtaatcccagca i nomLeu3.chr10 M 1602 C 0 s rheMac3.chr19 59902276 23 + 64156825 ggctcacacctgtaatcccagca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919744 23 + 59248254 ggctcacacctgtaatcccagca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038332 23 + 51301725 ggctcacgcctgtaatctcagca i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55850775 5965 + 60714840 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=322364.000000 s hg38.chr19_GL949753v2_alt 46313 192 + 796479 ctttgggaggcccaagcgggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acacatatagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg s panTro4.chr19 58980430 192 + 63644993 ctttgggaggcccaagcaggcagatcacgaggtcaggagttcgagaccagcctggccaatatggtaaaaccccatctctactaaaaatac-----aaaaattagccaggcagggtggc--acgcacgtagtcccagctactcgggaggctgaggcagaagaatcgtttgaacctgggaggcagaggtttcattgagccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856740 192 + 60714840 ctttgggaggccgaggtgggcagatcacaaggtcaggagtttgagaccagcctggccaatatggtaaaaccccatctctactgaaaatac-----aaaaattagccaggcatggtggc--acgcacgtagtcccagctactcaggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagcca i ponAbe2.chr19 I 5965 C 0 s nomLeu3.chr10 102614358 199 - 106955855 ctttgggaggccgaggcgggcggatcacaaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaaaaaattagcctggcgtggtggcgggtgcctgtagtctcagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgccatgagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902299 192 + 64156825 ctttgggaggccgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatgggaaaaccccagctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtgtcagtgagccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919767 192 + 59248254 ctttgggaggctgaggagggcagatcacgaggtcaggagtcggagaccagcctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggtttcagtgagccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038355 192 + 51301725 ctttgggaggccgaggcgggcagatcacgaggtcaggagtcggagaccagtctggccaatatggtaaaaccccatctctactaaaaacat-----aaaaattagctgggcatggtggc--gcgcatgtagtcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagtggtttcagtgagccg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C e chlSab2.chr6 46751343 0 + 50890351 C a score=144535.000000 s hg38.chr19_GL949753v2_alt 46505 70 + 796479 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a s panTro4.chr19 58980622 70 + 63644993 agatcgcgccactgcactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55856932 72 + 60714840 agatcacgccactgtactccagcctgggcgacagagcaagactccgtctc----aaacaaaca-aacaaacaaaATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102614557 71 - 106955855 agatcataccactgcactccagcctgggcgacagagcgagactctgtctt----aaaaaaaaacaaaaaacaaa--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902491 76 + 64156825 agatcacgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaa-aaaaaacaaaaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54919959 73 + 59248254 agatcacgccactgcactccagcctgggcgacagagtgagactccatctc---aaaaaaaaaa-aaaaaacaaaaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038547 69 + 51301725 agatcacgccactgcactccagcctgggcgacagagtaagactccatctc-------aaaaaa-aagaaacaaaaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751343 72 + 50890351 agatcacgccactgcactccagcctgggcgacagagtaagacttcatctc----aaaaaaaaa-aaaaaacaaaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45328878 0 + 49145316 C a score=3038111.000000 s hg38.chr19_GL949753v2_alt 46575 1085 + 796479 aaactctggtctcccacttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagaGCTGTAATGTAACTCATTACAGCAGTTACAATAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACATGGGTAGACTTCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAtttttttttttaatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacatgactgAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccatgcacagtggttcacacctgcaatcccagccctttgggaggccgaggtgagtggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggtgggcacatgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGGATGTAGTATAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacacggtgaaaccttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgcaggcctgtaatcct s panTro4.chr19 58980692 1083 + 63644993 aaactctggtctcccgcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccaggcacccggcaagAGCTGTAATGTAACTCATTACAGCAGTTACAACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAA---TAAAAGACACGGGTAGACATCGCATCCACGGCATAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttttt--aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaattctccagcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacATAACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACGTCATgcacagtggttcacacctgcaatcccagcactttgggaggccgaggtgagcggatcacctgaggccaggggttcaagaccagcctggtcaacatggtcagaaccccatctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatcccagctactcaagtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccaccctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaaacaaaacaaaaaaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTTTCCAAGAATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacacctgtaatcccagcacttcgggaggcctaggcaggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggtgaaaccttcatcgctact-aaaaatag-aaaaataagccggatg-ggtggtgcaggcctgtaatcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55857004 1066 + 60714840 AAActctggtct---gcttacctggctcaatgtgtattaaactcttttttgcaattcctctgtcttgatgaatgggcttcatccgggcacccagcaaga--------ggaactcattacagcagttacaACAG-ATGAAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACATCG-ATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAttattttttttt-taatttgaaactgggtctcactatgttg-cccaggctggtttcaaa-ctcctgggctcaagcaattctccagcctcagcctcccgaagtgctgggattacaggcctgagtcaccgcgcATGACTGAGAAAGA---ATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACATgccaggcacagtggttcacacctgcaatcccagcactttgggaggccgaggtcagtggatcacatgaggccaggggttcgagaccagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaacattagccacgcgtggtggcaggcacctgtaatcccagctactcaggtggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaacaaaatgaaacaaaacaaaa--------caaaaTGCTAAGCAATGCAAAGAATGGTGGAAGGAATCTGGTGCTGCTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAAC-AAAAGGCAAAGGAGggccaggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagttcaagaccagcccttgtcaacatggcaaaaccttcatcactactaaaaaatagaaaaaattaaccggatg-ggtggtgcaggcctgttatcct i ponAbe2.chr19 C 0 T 6164 s nomLeu3.chr10 102614628 1069 - 106955855 aaactctggtctcccgcttacctggctcaatgtgtattaaactcctttctgcaattc--ctgtcttgatgaatgggcttcatccgggcagcaggcaaga--------ggaactcattACAGCAGTTTCAACAG-ATGCAAAATAATTTACAGAGCTGAGGAAGCAGAGTGCTAGCACCCAGTAA-----------GGCAGGAAACAAGATACTTTC---AGAATTCTAGCAGTCAGTGCTAAAAGACATGGGTAGACACCGAATCCATGGCACAGAAGCAGGAGGCTGTGCCAACACCATGTTCTGAGGATGAGATAAttctttttt--aatttgaaactgggtctcactatgttgccccaggctggtctcaaagctcctgggctcaagcaattctccatcctcagcctcccaaagtgctgggattacaggcctgagccactgcacATGACTGAGAAAGAATTATTGAGAGTGAAATCACTAACACCAA------------GAAAAACCAAAACACgccaggcacggtggttcacacctgcaatcccagcactttgggaagccaaggtgagcgcatcacctgaggccaggggttcgagaccagcctggtcaacatggtgacaaccccgtctctact-aaaaatacaaaaattagccaggcgtggtggcgggcacctgtactcccagcttctcaggtggctgaggcagaagaattgcttaaacttgggaggcagag------gtgagctgagatcgtaccactgcactccagcctgggcgacagagcaagagtccgtctcaaaaacaaaacgaaacaaaacaaaataaaaaaCAAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcgcagtggctcacgcctgtaatcccagcactttgggacgccgaggcgggcagatcacctgaggtcaggagttcaagaccag-cctggtcaacatggcgaaaacttcatcgctact-aaaaatag-aaaaattagccggatg-ggtggtgctggcctgtaatcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59902567 1077 + 64156825 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGAAAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacgcATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACGAAGGAAAAAAAAAGAAAAAAGAAAAACACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctgggcaacgtggtgagaaccacatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccgctgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54920032 1077 + 59248254 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatgggcttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaATAG-ATGAAAAATAATTT--AGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCGGTGTTAAAAGACATGGGTAGACCTCGCATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-ccaaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgggattacaggcctgagccaccacacATGACTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaaaaaaaagaaaaaagaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctact-aaaaatacaaaaattagctgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccgggcacggtggctcacgcctgtaatcccagcactttgtgaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtcgtgcaggcctgtaatcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47038616 1075 + 51301725 acactcTGGTCTCCCGCTTACCTGACTCAATGTGTGTTGAACTCCTTCTTGCAATTCCTCTGTCCTGATGAATGGGCTTCATCCAGGCAGCCAGCAAGA--------GGAACTCGTTACAACAGTTACaacag-atgaaaaataatttacagagTTGAGGAAGTGGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATGGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGgatgagataatttttta----aatttgaaactgggtctcactatgttg-cccgggatggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccacagtgctgggattacaggcctgagccaccacgcatgACTGAGAAAGAATTATTGAGAGTGAAATCATTAacaccaaggaaaaa-----aaaaaacaaaaacacgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcgaatcacctgaggccaggggttcgagaccagcctggtcaacgtggtgagaaccccatctctactaaaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaacctcgggaggcagaggttgcagtgagctgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaccaaaacgCTAAGAGATGCAAAGAATGGTAGAAGGAACCTGGTGCTGGTGGattcataattttcaaaaacagcCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAaggagggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatgtcaggagttcaagaccag-cctggtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataatccagatg-ggtggtgcaggcctgtaatcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46751415 1072 + 50890351 aaactctggtctcccgcttaccggactcaatgtgtgttgaactccttcttgcaattcctctgtcctgatgaatggacttcatccaggcagccagcaaga--------ggaactcgttacaacagttacaACAG-ATGAAAAATAATTTACAGAGTTGAGGAAGCAGAGTGCTAGCACCCAGTAAGGCAGAACTCTGGCAGGAAACAAGATACTTTCAGAAGAATTCTAGCAGTCAGTGTTAAAAGACATGGGTAGACCTCACATCCATAGCACAGAAGCAGGAGGCTGTGCAAACACCATGTTCTGAGGATGAGATAAttttttt----aatttgaaactgggtctcactatgttg-cccaggctggtctcaaa-ctcctgggctcaagcaatcctccagcctcagccttccaaagtgctgagattacaggcctgagccaccacgcATGTCTGAGAAAGAATTACTGAGAGTGAAATCATTAACACCaagaaaa-------aaaaaaaaaaaaCACgccaggcacagtggttcacacctgcaatcccagcactttgggaggccaaggtgagcggatcacctgaggccaggggttcgagaccagcctggtcaacgtgatgagaaccctatctctact-aaaaatacaaaaattagccgggcatg-------------gtaatcccagctactcaggaggctgaggcaggagaattgcttaaactcgggaggtagaggttgcagtgagctgaggtcgcaccactgcactccagcctgggcaacagagtgagattctgtctcaaaaacaaaatgaaacaaagcaaaa-----aaCCAAAACGCTAAGAGATGCAAAGAATGGTAGAAGGAATCTGGTGCTGGTAGATTCATAATTTTCAAAAACAGCCTAGAAATTATCCAAGGATGTAGTACAACAAAAAGGCAAAGGAGggccaggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtagatca--tgatatcaggagttcaagacaag-cctagtcaacatggcaaaacattcatctctact-aaaaatag-aaaaataagccagatg-ggtggtgcaggcctgtaatcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45328878 1071 + 49145316 aaactctggtctcccacctacctggctcagtgtgtattaaactctttcttgcaatttctttgtcttgatgaatgggcttcatctgggcagccaccaaga--------ggaacccgttatgacagttacaTCAGCATGAAAAATAATTTATAGAGCTGAGGAAGCAGAGTGCTAGCATCCAGTAAGGCAGAACTCTTGCAGGAAACAAGATACTGTCGGAAGAATTATAGCAGTCAGTGCTGAAAGATGTGAGTAGACATCACATCCGTGGCACAGAAGCAGGAGGCTGTGCAAACGCCATGTTCTGAGGATGAGAGAAttgtttttta-aatttgaaactgggtctcactgtgttg-cccaggctggtctcaaa-ctcctgggctcaagcgatcctccagcctcagcctcccaaactgctgggattacaggcctgagccaccgtgcctgacTGGGAAAGAATTATTGAGAGTGAAATCACTAACTCCAA------------GAAAAAACAAAACCCAccaggttcggcggttcacatgtacaatgccagcactttgggaggctgaggtgggcagatcacttgaggccaggggttcgagatcagcctggtcaacatggtgagaaccccgtctctact-aaaaatacaaaaattagccaggcgtg---gtgggcgcctgtagtcccagctaatcaggtggctgcggcagg-gaatccctcgaactcaggaggcagaggttgcagtgagccgagattgcaccactgcattccagccagggtgacagagagagactccatctcacaaa-------aaacaaaGCTAAT-----AACCAAAACGCTAAGAGATGCAAAGACTGGTAGAAGGAATCTGGTGCTGGTGGATTCATAATTTTTAAGAACAGCCTAGAAATTATCCAAGTATCTAGTACAACAAAAAGGTAAAGGAGggcaggacgcagtggctcacgcctgtaaccccagcacttt--gaggccaaggcaggttgatca--taagatcaggagttcgaaaccag-cctgaccaacatggtgaaac-tccatctctact-aaaattac-aaaaattagccaggtgtggtggcgtgtgcctgtagtccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I a score=260751.000000 s hg38.chr19_GL949753v2_alt 47660 125 + 796479 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagcgaagatcgcgccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa s panTro4.chr19 58981775 125 + 63644993 agctacttgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacagagtgagactccatttcaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615697 125 - 106955855 agctactcgggaagctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagatcgcaccattgcactccatcct-ggcaacacagtgagactccatttcaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903644 124 + 64156825 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54921109 124 + 59248254 agctactcgggaggttgaggtaagagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagatcgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i macFas5.chr19 C 0 I 905 s papAnu2.chr19 47039691 124 + 51301725 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtgagtcgagaccgcaccattgcactccatcct-ggcaacagagtgagacgccatttcaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752487 113 + 50890351 agctactcgggaggttgaggtaggagaatcacttgaaccagg-aggtggaggtggcagtaagccaagattgtgccactgcactccatcct-ggcaacagagtgagacgccatt-----------aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45329949 126 + 49145316 agctacttgggaggctgaggcaggagaatcacctgaatccaggaggcagaggttgcagtgagccaagatcttgccattgcactccagcctgggtgacagagtgagactctgtctaaaaaaaaaaTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T a score=19653.000000 s hg38.chr19_GL949753v2_alt 47785 54 + 796479 aaaaa-aaaaaaGGCAAAGGAGTGGAAATTGT------GAAAGGGAGgtttttttgttgtt s panTro4.chr19 58981900 48 + 63644993 aaaTA-------GGCAAAGGAGTGGAAATTGT------GAAAGGGAGGTTtttttgttgtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615822 56 - 106955855 aaaaaaaaaaaaGGCAAAGGAGTGGAAATTGTTAAGGGGAAAGGGAAGCttttt-----tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903768 34 + 64156825 --------aaaaGGCAAAGGAGTAGAAACTTT------AAAAGGGGAA------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039815 36 + 51301725 --------aaaaggcaaagcagtAGAAATTGT------AAAagggaag-----------tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752600 45 + 50890351 aaaaa-aaaaaaGGCAAAGGAGTAGAAATTGT------AAAAGGGAAC---------AGtt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330075 39 + 49145316 ----------AATTTAAATAAGACAAAATTTC------------TAATTTTTTTTGTTGTT i calJac3.chr22 C 0 T 9303 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e macFas5.chr19 54921233 905 + 59248254 I a score=10060.000000 s hg38.chr19_GL949753v2_alt 47839 32 + 796479 ttgttgtttttgtttttgttttttgtttttt--g s panTro4.chr19 58981948 32 + 63644993 tttttgtttttgtttttgttttttgtttttt--g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615878 32 - 106955855 tgttagtttttgtttgtttgtttgtttgttt--g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903802 17 + 64156825 ----------------tttgttttgtttttttt- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47039851 24 + 51301725 tttttgttt-------tttgttttgtttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752645 30 + 50890351 tttttgttttt-tttgttttttttgtttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T e macFas5.chr19 54921233 905 + 59248254 I a score=265915.000000 s hg38.chr19_GL949753v2_alt 47871 151 + 796479 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccatcatacctggc s panTro4.chr19 58981980 151 + 63644993 tttttgagacagagtctcactctattgcccaggctggagtgcagtggcaagatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcacaagtagctgggtctacaggtgcatgccatcatacctggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102615910 151 - 106955855 tttttcagacggagtctcactctatcgcccaggctggagtgcagtggcaagatcttggctcactgcaacttccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaagtagctgggtctacaggtgcatgccaccatatctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903819 149 + 64156825 --tttgagacagagcgtcactttatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922138 151 + 59248254 tttttgagacagagcgtcactctatcacccaggttggagtgcagtggcacgatcttggctcactgcaacctccgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i macFas5.chr19 I 905 C 0 s papAnu2.chr19 47039875 150 + 51301725 -tttggagacagagcgtcactctatcacccaggttggagtgcaatggcgcgatcttggctcactgcaaccttcgcctcccatgttcaagcaa-ttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752675 151 + 50890351 -ttttgagacagagcgtcactctatcacccaggttggagtgcagtggcgcgatcttggctcactgcaacctccgcctcccatgttcaagcaatttctcctgcctcagcctcccaaggagctgggcctacaggttcatcccgccatacctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e ponAbe2.chr19 55858070 6164 + 60714840 T e calJac3.chr22 45330114 9303 + 49145316 T a score=379650.000000 s hg38.chr19_GL949753v2_alt 48022 164 + 796479 taattttttatttttagtagagacggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG s panTro4.chr19 58982131 164 + 63644993 taattttttatttttagtagagatggggtttcactatgttggccaggctggtctcaaatccttgacctcagatgatccatccacctcggcctcccaaagtgctgggatgacaggcatgagccaccacgccaggccAGAAAGGGAAGA-TTTTGTTAAGAGCGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55851906 164 + 60714840 taattttttatttttagtagagacggagtttcaccatggtggccaggctggtctcgaatccttgacctcagatgatctgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgcgcctggccGGAAAGGGAAGA-TTTTTTTAAGAGCGATG i ponAbe2.chr19 T 6164 C 0 s nomLeu3.chr10 102616061 164 - 106955855 taattttttatttttggtagagacggggtttcaccatgttggccaggctagtctcgaatccttgacctcagatgatccgcccacctcggcctcccaaagtgctgggatgacaggcatgagccactgtgcccggccAGAAAGGGAAGA-TTTTTTTATGAGCGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59903968 164 + 64156825 tgattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TATTTTTAAGAGCGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922289 164 + 59248254 taattttttatttttagtagagacggggtttcaccatgttggccaggctggtctcgaattcttgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgccgggccAGAAAGGGAAGA-TTTTTTTAAGAGCGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040025 165 + 51301725 taattttttacttttagtagagacggggtttcaccatgttggccaggctggtctcgaattctcgacctcaggtgatccgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccgcgcccggccacaaagggaagattttttttaagagcGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752826 164 + 50890351 taattttttatttttagtagagacagggtttcaccatgttggccaggctggtctggaattcttgacctcaggtgatctgcctgcctcggcctcccaaagcaccgggattacaggcgtgagccaccacgctcggccAGAAAGGGAAGA-TTTTTTAAAGAGCGATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103183439 1686 + 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=559368.000000 s hg38.chr19_GL949753v2_alt 48186 208 + 796479 ATATTGTAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCACC s panTro4.chr19 58982295 208 + 63644993 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAACCATACACGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCCGTCACGTCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852070 208 + 60714840 ATATTGCAAGTAATGAAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAATATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCAGCTGTCACGTCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616225 208 - 106955855 ATATTGCGAGTCATGCAGAAATGAGATTCACAGAAGAACAAAACAATCTCTGATTAAAAACAACACACACA-GTTCCTCAAAATCATACATGCCCTTACCTGTCACCAACATCTCAAGCTGATCACTGGGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CATCGCCGGCTGTCACGTCCTCC i nomLeu3.chr10 C 0 I 315 s rheMac3.chr19 59904132 208 + 64156825 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922453 208 + 59248254 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGCCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040190 208 + 51301725 ATATTGCGAGTAATGAGGAAATAAGATTCACAGAAGAACAAAACAACCTCTgattaaaaacaacacacacc-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGCGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACACGCAGCTGTAGTTCCCAG-------------CGTTGCCGGCTGTCACGTCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46752990 208 + 50890351 ATATTGCGAGTAATGAGGAAATGAGATTCACAGAAGAACAAAACAACCTCTGATTAAAAACAACACACACA-GTTCTTCAAAATCATACACATCCTTACCTGTCACCAATATCTCAAGCCAATCACTGTGTTCTGAGGCCCAGAAGGGAGACTTTGTCTGGTAGTACATGCAGCTGTAGTTCCCAG-------------CGTCGCCGGCTGTCACGTCCTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532159 212 - 122678785 atAATGGACATGATGGAGAAATGAGAATCAGAGACTAGCAGAACACTCTCTGAT--------ATATATACATTTTTTTCCTTATCATGCAAAACCTTACCTGTTACCAAGATTTCGGG-TGGTTATTGGGTG-GGAGGTCAAGAAAGGAGCCTTTATCTGGTGGTAGACAACTCTGCAGTTTCCAGAAACGATTTCCAAAATCGTTGACTGTCACATTTTGA i canFam3.chr1 I 1673 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=5348.000000 s hg38.chr19_GL949753v2_alt 48394 2 + 796479 AG s panTro4.chr19 58982503 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852278 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59904340 2 + 64156825 AG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922661 2 + 59248254 AG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040398 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753198 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532371 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45330114 9303 + 49145316 T e nomLeu3.chr10 102616433 315 - 106955855 I a score=1007578.000000 s hg38.chr19_GL949753v2_alt 48396 415 + 796479 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGTGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGTTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTGTAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg s panTro4.chr19 58982505 415 + 63644993 AGAGAAGTCTATCTCCTTCCCCGCTGGACTCTGCAGCTGGATGGGAGATGGCGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACAAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTCGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCGTGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggcctggcatggtggctcacacctgtaatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852280 415 + 60714840 AGAGAAGTCTATCTCGTTCCCCGCTGGACTCCGCCGCTGGATGGGTGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCACAAACAATTGGTCTTGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCCACTCACCCCTGTTCTCCTGGCTGGAGGCTCTCACGGAGTGTGGGAAATGAGAGATTCCTGATATCTCCTACCTTCCTCCACTTCCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102616748 415 - 106955855 AGAGAAGTCTATCTCCTTCCCTTCTGGACTCCGCAGCTGGATGGGCGATGACGTCCCTGCCTTCAGTAGAGCGAACATGATAGGCACGAACAATTGGTCTCGCTTCTGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACTGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGACTCTGAGGTCCTGGGGAGAAGTCTGGAATCTCCCACTCACCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATGAGAGATTCCTGATCTCTTCTACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTACAAGACCTGTATAAggccgggcatggtggctcacacctataatcccagcactttgggagg i nomLeu3.chr10 I 315 C 0 s rheMac3.chr19 59904342 405 + 64156825 GGAGAAGTCCGTCTCCTCCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54922663 405 + 59248254 GGAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGACGTACCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTCTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCCGGAGGCTCTCATGGAGTGTGGGAAATCAGAGACTTCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccgggcgtggtggctcacacctgtaatcccagca---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040400 405 + 51301725 GGTGAAGTCCGTCTCCTTCCCCGCTGGACTCCTCAGCTGGATGGCAGATGACGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGTTGGTTTGGCTGCCGGCACTGCAGAGTCACCCTTCCACCTGCGGTCACCGTACCCCTTTGGTGGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCACCCCTGTTCTCCTGGCCAGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGATCTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACGGAGATTCTCCCTCCTGCAAGACCTGtataaggccgggcgtggtggctcacacctgtaatcccagca---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753200 405 + 50890351 GAAGAAGTCCGTCTCCTTCCCCGCTGGACTCCGCAGCTGGATGGCAGATGATGTCCCTGCCTTCAGTAGAGCAAACATGATAGGCAGAAACAGCTGGTCCGGCTGCCAGCACTGCAGAGTCACCCTTCCACCTACGGTCACCGTACCCCTTTGGTAGGTTTGGAGGAAAGGTTTAGATAAATGTCCTGTAAGAGAAG-TCAGGCTCTGAGGTCCTGGGGAGAAGTCTGGAATCCCCTACTCGCCCCTGTTCTCCTGGCTGGAGGCTCTCATGGAGTGTGGGAAATCAGAGATTCCTGAACTCTTCCACCTTCCTCCACTTTCTACTCCGACCCCAGGACAGAGATTCTCCCTCCTGCAAGACCTGTATAAggccggccgtagtggctcacacctgtaatcccagca---------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19532373 308 - 122678785 AGAAAAGTCTGCCCGTTTTCCTTCAGGTCTATGGTGCTGTACATGCTTTCTAGTACTTGTCTTCAGGAGAACCAACATCACATGTTCAAGCA--TATTCTGGCCTGTGGCACTACAGAGTCACATTTCTTCCCTGGGTCACCTTA-----------GGCTTGGAGAGAAGGTTTGGGCAAACTTCCTGTAAGAGAAGATCACTTCCTG----CAAGGGAAG----------------ATTAATTCCTGT---------------------------------AAGGGAAGATT-----------------------ACTTCCTG---------TAAGGTAAGGTCACTACCTGTAACAA------TGTCAGAGGTAGCCTGGTTTCTCTCCTTC----CCTTGGCCTTCTGGGAGG i canFam3.chr1 C 0 I 3169 e calJac3.chr22 45330114 9303 + 49145316 T a score=405849.000000 s hg38.chr19_GL949753v2_alt 48811 189 + 796479 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga s panTro4.chr19 58982920 189 + 63644993 ccaaggcgggtggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcaaaaccctgtctctactaaaaatacaaaaattagccgggcgtggtggcaggcgcctgtaatcccagctgctaaggaggctggagcaggagaatcacttgagcccaggaggcggaagtggcagtgagccgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852695 189 + 60714840 ccgaggtgggcagatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaagaggcggaagttgcagtgagccgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617163 189 - 106955855 ccgaggtgggcggatcacctgaggtcaggagtttgacatcagcctgcccaacatggcaaaacgctgtctctactaaaaatacaaaaattagccgggcacgttggcaggcacctgtaatcccagctgctcaggaggctggagcaggagaatcacttgagcccaggaggcggaagttgcagtgagccgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904747 171 + 64156825 ------------------ctgaggacgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggtggcagtgagtcaaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923068 171 + 59248254 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040805 171 + 51301725 ------------------ctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagccgggcatggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcagttgagcccaggaggcggaggttgcagtgagtcaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753605 171 + 50890351 ------------------ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaagaattagccgggtgtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggaaaatcagttgagcccaggaggcagaggttgcagtgagtcaaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19532681 3169 - 122678785 I e calJac3.chr22 45330114 9303 + 49145316 T a score=585205.000000 s hg38.chr19_GL949753v2_alt 49000 231 + 796479 tggcaccactgcactctggcctgggcgacaaa----gTATAAAACCAACATATGCAATTTCGTTCCTG-TCTCTCTCCCTCTCCCATCACCCCCAACTACTCTGAAGGTGGGACCCCTTTTCTCCCTCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT s panTro4.chr19 58983109 231 + 63644993 tggcaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTTGTTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCTCTGTTCCTTCACTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGTACCTGTCACCAACAGTAGAAGGACGTCACTGCGCTGTGAAAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55852884 232 + 60714840 tggcaccactgcactctggccagggcgacaga----gTATAAAACCAAGATATGCAATTTCGTTCCTGTTCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTAGAGGTGGGACCCCTTTTCTTCCTCTGTTCCTCCTCTTCCTCCCTTATCCCCTGTCCCCCGTATGTCATTGGCAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGACGTCACTGTGCTGTGAAAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617352 231 - 106955855 tgacaccactgcactctggcctgggcgacaga----gTATAAAACCAAGATATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCGCCACCCCCAACTACTCTGGAGGTGGGACCCCTTTTCTCCCCCTGTTCCTCCACTTCCTCCCTCATCCCCTGTCCCCCATATGTCATTGGTAGGCACCCTGTCTGCACCTGTCACCAACAGTAGAAGGGCGTCACTGTGCTGTGAAAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59904918 230 + 64156825 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCCACCCTGGAGGTGGGACCCCTTTTCTCCCTCTG-CCCTCTGCTTCCTCCCTCATCCCCTGCCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923239 230 + 59248254 tggcaccactgcactccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACCCCTTTtctccctctg-ccctctgcttcctccctcatcccctgcccCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47040976 230 + 51301725 tggcaccactgcactccggcctgggtgacaga----gtataaAACCAAGGTATGCAATTTCattcctg-tctctctccctctcccaccacccccagctaccctggaggtgggactccttttctccctctg-tccTCTGCTTCCTCCCTCATCCCCTGCCCCCCGCATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGCGAAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46753776 230 + 50890351 cggcaccactgctctccggcctgggtgacaga----gTATAAAACCAAGGTATGCAATTTCATTCCTG-TCTCTCTCCCTCTCCCACCACCCCCAGCTACCCTGGAGGTGGGACTCCTTTTCTCCCTCTG-TCCTCTGCTTCCTCCCTCATCCCCTGTCCCCCGTATGTCATCGGCAGGCACCCTATCCACACCTGTCACCAACAGCAGAAGGACGTCACTGCGCTGTGAAGGGAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19535850 201 - 122678785 TGGTCTCACCCTCTTCTGACTCTGACTACAAGCCCTGGGTGAAGCCCAGCCAAGTCGTTCTGCTGCTG-TGTTTCTCCATCTCCCCTTGCCCCC--------------------------CCTCCCCGCCTCCCTGGGGTTCCTCCCCCA-CACCTGTCCC-----TGTTACTCCGAAGCACCC--TCCTCACCTGTCACCAGCAGGAGGAGGATGTCACTGGGCTGTGAACTTAT i canFam3.chr1 I 3169 C 0 e calJac3.chr22 45330114 9303 + 49145316 T a score=828846.000000 s hg38.chr19_GL949753v2_alt 49231 258 + 796479 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA s panTro4.chr19 58983340 258 + 63644993 GTGGGGGGATGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCACCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACATCGAAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853116 258 + 60714840 GTGGGGGGACGCTTTTCTGTAGTATTCACAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTCGGCCGCGCCCTGTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCGACATTGCAGTGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617583 258 - 106955855 GTGGGGGGATGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGACTTTTAGATTATTGAGGTGAAATTTGGCCGCGCCCTCTGTAGAATCAAGGGGCTTCG---GGGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACACCTCTGGCAGGAGTCCAACAACGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905148 258 + 64156825 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTTGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923469 258 + 59248254 GTGGGGGAACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTCGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTTGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041206 258 + 51301725 GTGGGGGGACGCTTTTCTGTGGTATTCGCAGGTGTACTCGCCAGCATTTCTGATTTTTAGATTCTTGAGGTGAAATTCGGCCGGGCCCTCTGTTGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754006 258 + 50890351 GTGGGGGGACGCTTTTCTGTAGTATTCGCAGGTGTACTCTCCAGCATTTCTGATTTTTAGATTATTGAGGTGAAATTCGGCCGGGCCCTCTGTCGAATCAAGGGGCTTCG---GAGACTCCAGAATAATTCCTCCCTTCCTGAGAACAAAGCTCACGCCTCTGGTAGGCGTCCAGCATCGCAGCGTCACATTGCTGTCGGCAGGGACCACCGAGCTGGGCCAGGCACTGAGGGACGGCTTGGGCAGTGACCCTGGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45320811 252 + 49145316 GTGGGAGACTGCTGTCTTGTAG---GCACAAAAGTACCTCCCAGCATCCTTGGGCTTCAAGTGCATGAAGGGGAATTCCGCTTCGCTTCCTGCCGAGCTCTG----TTCGCGCTGGAATGCAGAGTCGTTC--ACCTTGCGCAGCGTGAATGTCACATTCTGGGAAGGAGCCCGACACTTCAGGGTCACGTTGCTCTTGGCTTCAGCCACCGAGCTGGGCCAGGCGTGGAGGGAGGGCTTGGACAGTTTCTCTGGAAAGAA i calJac3.chr22 T 9303 I 9366 s canFam3.chr1 19536051 258 - 122678785 TTGTGGGAGCTCTCGTCTATAGTATTCGCAGGTGTATGGTCCAGCGTTACGGGTTTTTAGGTCATTGAGGTGAAATTCAGCCACGCCCTCTGTGGAAGCCAGTGATTGCA---AGGACTCTAAGATACTTCTTCCCTTTCTGAGAACAAAGTTGACGTTCTTGGTGGAAGTCTGGCATTGCAGTGTCACATTGCTCTTGGAAAGCATCATCCAGCTGGGCCAGGCACTGAGGGAGGGCTTGGGAAGGGTCTCTGGAAGGAA i canFam3.chr1 C 0 C 0 a score=130141.000000 s hg38.chr19_GL949753v2_alt 49489 53 + 796479 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT s panTro4.chr19 58983598 53 + 63644993 GCAGAGCCTGATGCTGGACCCGATGC---CCTCCCCTGCTCTCAGGAAGCCCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853374 56 + 60714840 GCAGAGCCCGGTGCTGGACCCAACGCCCTCCTCCCCTGCTCTCAGGAAGCCCTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617841 52 - 106955855 ACAGAGCCTGGTGCTGGACCCAATGC---CCTCCCCTGCTCTCAGG-AGCCCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905406 53 + 64156825 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923727 53 + 59248254 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041464 53 + 51301725 GCAGAGCCCAGTGCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAaagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754264 53 + 50890351 GCAGAGCCCAGTCCTGGGCCTGACGC---CCTTCCCTGCTCTCAGAAAGCCCTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19536309 53 - 122678785 GCAGATTTGGGGATGGGATTTGGTGC---CCTGAGCTGCTCTCAAGAAGTCTCTTT i canFam3.chr1 C 0 I 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=33584.000000 s hg38.chr19_GL949753v2_alt 49542 20 + 796479 TAAAAt-----------------------ttattattattatt s panTro4.chr19 58983651 26 + 63644993 TAAAAT-----------------ttattattattattattatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853430 17 + 60714840 TAAAAt--------------------------ttattattatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617893 43 - 106955855 TAAAATttattattatattattattattattattattattatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905459 20 + 64156825 TAAACT-----------------------ttattattattatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923780 20 + 59248254 TAAACT-----------------------ttattattattatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041517 20 + 51301725 taaaat-----------------------ttattattattatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754317 20 + 50890351 TAAAAT-----------------------ttattattattatt i chlSab2.chr6 C 0 I 32 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=627.000000 s hg38.chr19_GL949753v2_alt 49562 1 + 796479 a s panTro4.chr19 58983677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853447 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617936 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905479 1 + 64156825 a i rheMac3.chr19 C 0 I 19 s macFas5.chr19 54923800 1 + 59248254 a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47041537 1 + 51301725 t i papAnu2.chr19 C 0 I 4 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I a score=6825.000000 s hg38.chr19_GL949753v2_alt 49563 5 + 796479 ttatt s panTro4.chr19 58983678 5 + 63644993 ttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853448 5 + 60714840 ttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617937 5 - 106955855 ttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54923802 5 + 59248254 ttatt i macFas5.chr19 I 1 I 13 s papAnu2.chr19 47041542 5 + 51301725 ttatt i papAnu2.chr19 I 4 I 10 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e rheMac3.chr19 59905480 19 + 64156825 I a score=6780.000000 s hg38.chr19_GL949753v2_alt 49568 13 + 796479 ttgagatggagtc s panTro4.chr19 58983683 13 + 63644993 atgagatggagtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853453 13 + 60714840 ttgagatggagtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102617942 13 - 106955855 TTGAGATGGAGTC i nomLeu3.chr10 C 0 M 1546 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=65497.000000 s hg38.chr19_GL949753v2_alt 49581 253 + 796479 tccctctgttgcccaggctagagtgcagtggtgcaatctcagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcgtga s panTro4.chr19 58983696 253 + 63644993 tccctctgttgcccaggctagagtgcagtggcgcaatcttagttcactgcaacctccgtctcctgggttaaagcaattctcctgcctcagcctcccaagtaggtgggattacaggcacgcaccaccacacccagctaattttgtattttagtagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgagattacaggcatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55853466 253 + 60714840 tccctctgttgcccaggctagagtgcagggatgcaatctcagctcactgcaacctctgtctcccgggttaaagtgattctcctgccttagcctcccgagcagctgggattacaggcacgcaccaccacacctggctaattttgtattttcgtagagacaaatttccaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccactttggcctcccaaagtcctgggattataggcgtga i ponAbe2.chr19 C 0 I 5654 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=291.000000 s hg38.chr19_GL949753v2_alt 49834 3 + 796479 acc s panTro4.chr19 58983949 3 + 63644993 acc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I e papAnu2.chr19 47041547 10 + 51301725 I e macFas5.chr19 54923807 13 + 59248254 I e rheMac3.chr19 59905480 19 + 64156825 I a score=9642.000000 s hg38.chr19_GL949753v2_alt 49837 12 + 796479 cctgagcccAAT s panTro4.chr19 58983952 12 + 63644993 cctgagcccAAT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905499 12 + 64156825 CCTGCGCCCAAC i rheMac3.chr19 I 19 C 0 s macFas5.chr19 54923820 12 + 59248254 CCTGCGCCCAAC i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47041557 12 + 51301725 cctgcGCCCAAC i papAnu2.chr19 I 10 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M e chlSab2.chr6 46754337 32 + 50890351 I a score=54171.000000 s hg38.chr19_GL949753v2_alt 49849 44 + 796479 CAGGAATCCCATTTTAAGAAGGGAAGCGggctgggtgcggtggc s panTro4.chr19 58983964 44 + 63644993 CAGGAATCCCATTTTAAGAAGGGAAGGGggctgggtgcggtggc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59905511 44 + 64156825 CAGGAAGCCTATTTTAAGAAGGGAAACGggccaggcgcggtggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923832 44 + 59248254 CAGGAAGCCTATTTTAAgaagggaaacgggccaggcgcggtggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041569 44 + 51301725 CAGGAAGCCTATTTTACGAAGGGAaacgggccaggcgcggtggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754369 44 + 50890351 CAGGAAGCCTATTTTAAGAAGGGAAATGggccaggcgcggtggc i chlSab2.chr6 I 32 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102617955 1546 - 106955855 M a score=112748.000000 s hg38.chr19_GL949753v2_alt 49893 65 + 796479 tcacgcctgtaatcccagcaccttgggaggccaaggcaggcagatcacgaggtcatgagatcgag s panTro4.chr19 58984008 65 + 63644993 tcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtcatgagatcgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102619501 65 - 106955855 tcaccccggtaatcccagcactttgggaggccgaggcgggcaaatcatgaggtcatgagattgag i nomLeu3.chr10 M 1546 C 0 s rheMac3.chr19 59905555 65 + 64156825 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcggaagatcgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923876 65 + 59248254 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041613 65 + 51301725 tcacgcctgtcatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754413 65 + 50890351 tcacgcctgtaatcccaacactttgggaggccgaggcgggaagatcacgaggtcgtaagatcaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e ponAbe2.chr19 55853719 5654 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=478785.000000 s hg38.chr19_GL949753v2_alt 49958 219 + 796479 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgagcccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc--------------aaaaaaaaaagagaaaaaGAGGG s panTro4.chr19 58984073 218 + 63644993 accatcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcatggtggtaagcacccgtagtcccagctacttgggaggctgagacaggagaatcacttgaacccaggaggcggaggttgctgtaagccgagattgcaccaccgcactccagcctggcgaaagagtgagactccgtc---------------aaaaaaaaagggaaaaaGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859373 233 + 60714840 accatcctggccaacatggtgaaactccgtctctaccaaaaatacaaaaattagctgggcattgtggcaagcacctgtagtcccagctactcgggaggctgagacaggagaatcacttgaacccaggaggcggagtttgctgtaagccgagattgcaccactgcactccagcctggtgaaagagtgagactctgtcaaaaagaaaaaaaaaaaaaagaaaaagaaaaaGAAGG i ponAbe2.chr19 I 5654 C 0 s nomLeu3.chr10 102619566 219 - 106955855 accattttggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcaagcacctgtcgtcccagctacttgggaggctgagacaggagaatcacctgaacccaggaggcggaggttgctataagccgagattgcaccaccgcactccagcctggcgaaagagtgagactctgtc--------------aaaaaaaaaaaaaaaatagaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905620 211 + 64156825 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54923941 213 + 59248254 accatcctggccaacatggtgaaactctgtatctactacaaatacaaaaactagccgggcgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccgtc-------------------aaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041678 214 + 51301725 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcgtgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggcgaaagagtgagactccatc-------------------aaaaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754478 217 + 50890351 accatcctggccaacatggtgaaactccgtatctactacaaatacaaaaattagccgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgctgtaagctgagatcgcaccaccacactccagcctggtgaaagagtgagactccatc----------------aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19536362 1046 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=929069.000000 s hg38.chr19_GL949753v2_alt 50177 374 + 796479 GGAAGGGGAAGAGAACAGCAGGGGATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAGCCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCTGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGCGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA s panTro4.chr19 58984291 374 + 63644993 GGAAGGGGAAGAGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCCGTGAGCCAGAAACCCCTACCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAACAGACTCTTAGAGGTCATACGCTCAGGAGTTCTCATTCTCCCCACACTGGACTGTGGCTTCCGCTCGACTTCCAGCTCCTCCATCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTGTCACCTCCCCCTGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859606 374 + 60714840 GGAAGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCTTTGGGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTATGAACCAGAAGCCCCTGCCTGGAGCCACGTCACCCCCTGCCCTGACCCCTGGAGATC-GTCCCAGAGTCTCCTGCTGAGAATAGACCCTTAGAGGTCATACTCTCAGGAGTTCTCATTCTCCCCACACTGGACTGCGGCTTCCGCTCGACTTCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCCTTGACCATCCTGTGTGGCTCTCACCTCCCCCCGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102619785 354 - 106955855 agaaGGGGAAGGGAACAGCAGGGAATTTGGGATGACAGGCCAAGGAGGGTGTAGTTGAGGAAACACTCACCATCTCCCCCTGTGTCTCCTTGGCCCACGCACAGTCCTGCAAGACAATCCTCTGTGAGCCAGAAGCCCCTGCCTGGAGCCACATCGTCCCCTGCGCTGACCCCTGGAGACC-GTCCCAGAGTCTCCTGCTGAGAACAGACCCTTGGAGGTCATGCGCTCAGGAGTT--------------------CTGTGGCTTCCGCTCGACTCCCAGCTCCTCCGTCCTTTCCCAGAGATTCTCTTTGACCGTCCTGTGTGGCTCTCACCTCCCCCGGCTCCAGGCCT-TTC----------------CCACAAATCCTTCCATTCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59905831 389 + 64156825 agaaGGGGAAGGGAACGGGAGGCAATTTGGGACGACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTTCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGAGTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924154 389 + 59248254 agaaggggaagggaacgggagggaaTTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAATCCTGAAAGGCAATCCTCTGTGAGACAGAAGCCCCTGCCTGGAGCCACATCA-CCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47041892 390 + 51301725 agaaggggaagggaacGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGGCCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGCGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGCGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATG-ATCCACATATCCTTCTATTCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46754695 390 + 50890351 agaaGAGGAAGGGAACGGGAGGGAATTTGGGACAACGGGCCAAGGAGGGTGTGATTGAAGAAACACTCACCATCTCCCCTTGTGTCTCCTTGGCCCATGCACAGTCCTGAAAGACAATCCTCCGTGAGACAGAAGCCCCTGCCTGGAGCCACATCACCCCCTACCCTGACCCCTGGAGACAGGTCCCAGAGTCTCCTGCTGAGTGCAGACCCTTGGAGGTCATGTGCTCAGGAGTTTTCATTCTCCCCACACTGGACTGTGGCTTCCGCTTGACTTCCAGCTCCCCCGTCGTTTCCCAGAGATTCTCCTTGACTGTCCTGTGTGGCTCTCACCTCCCCCTGTTCCAGGCCT-TTCCTGGTTCCACATA-ATCCACACATCCTTCTATTCTCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103185125 361 + 122678785 GGAAAGAGAAGGGACATG--GGGAGTTTGGAGTGA-AGGAGAGAGAGGGTCTAAATGAAGGA--ACTCACCATCAGTCATCCAGCTACTTTGGCCAACACACAGCCCTGTGAGAGAACTGTCCATGAGACACGAGCACCCGGCTGGAGGCCCGT-----CCCGAGGGGTCTCCTGGG---------CGGGGGCTGCTGCTGAGAACGGACCC-TGGAGATCATGCAACT--GGGTTCTCACT-TCCCCTCACTGGACTGTGGCTGCAGCTGTGCTCTCAGCTCCTGCCCCATTTCTCCAGGAAGGTC--------TCCTGTGTGGCTCTCACCTCACGTGGCCCCAGGACTGGTCCTGGTTCCACAGATGTTCACAAACCCTGTAATTCTTA i canFam3.chr1 I 1686 n 1046 e calJac3.chr22 45321063 9366 + 49145316 I a score=86147.000000 s hg38.chr19_GL949753v2_alt 50551 36 + 796479 TCTTCTGTTTGAAAACAGCACTCATTCTTACCAttt s panTro4.chr19 58984665 36 + 63644993 TCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55859980 36 + 60714840 CCTTCTGTTTCAAAACAGCACTCATTCTTACCAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620139 36 - 106955855 TCTTCTGTTTCAAAACGGCACTCATTCTTACCAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59906220 36 + 64156825 TCTTCTGTTTCAATACGGCACTCATTCTTACCAttt i rheMac3.chr19 C 0 I 18 s macFas5.chr19 54924543 36 + 59248254 TCTTCTGTTTCAATACGGCACTCATTCTTACCATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042282 36 + 51301725 TCTTCTGTTTCAGTACGGCACTCATTCTTACCATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755085 36 + 50890351 TCTTCTGTTTCAATACAGCACTCATTCTTACCAttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=20721.000000 s hg38.chr19_GL949753v2_alt 50587 16 + 796479 ctttctttctttcttt s panTro4.chr19 58984701 16 + 63644993 ccttctttctttcttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55860016 14 + 60714840 ctttctttctttct-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620175 16 - 106955855 ctttctttcttttttt i nomLeu3.chr10 C 0 I 608 s macFas5.chr19 54924579 16 + 59248254 CTTACTTACtttcttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042318 16 + 51301725 cttacttactttcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755121 16 + 50890351 cttactttcttttttt i chlSab2.chr6 C 0 I 8 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59906256 18 + 64156825 I a score=4460.000000 s hg38.chr19_GL949753v2_alt 50603 8 + 796479 ttctttcc s panTro4.chr19 58984719 8 + 63644993 ttctttcc i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55860030 8 + 60714840 tccttcct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924595 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042334 8 + 51301725 ttttttcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=906.000000 s hg38.chr19_GL949753v2_alt 50611 3 + 796479 ttt s panTro4.chr19 58984727 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860038 3 + 60714840 tct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924603 3 + 59248254 ttc i macFas5.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e rheMac3.chr19 59906256 18 + 64156825 I a score=2402.000000 s hg38.chr19_GL949753v2_alt 50614 143 + 796479 ctttctttct-tttttctttctttcattcattctttctttcattcattccagagacagagtctcgctctttctttctttttctttctttctttctttcattcattctttctttctttcattcattctttctttctttcattcat s panTro4.chr19 58984730 51 + 63644993 ctttctttctctctctctttctttcattcattctttctttcattcatt---------------------------------------------------------------------------------------------cat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860041 83 + 60714840 ttctctctctctctccctttctttc-------------ttccttcctt------------------------------------------------ccttcctttctttctctctctctttctttcttcctttctttcttttat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e papAnu2.chr19 47042342 0 + 51301725 C e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=180.000000 s hg38.chr19_GL949753v2_alt 50757 1 + 796479 t s panTro4.chr19 58984781 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860124 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47042342 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e macFas5.chr19 54924606 0 + 59248254 C e rheMac3.chr19 59906256 18 + 64156825 I a score=1531.000000 s hg38.chr19_GL949753v2_alt 50758 3 + 796479 cca s panTro4.chr19 58984782 3 + 63644993 cCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860125 3 + 60714840 cca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54924606 3 + 59248254 ccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042343 3 + 51301725 cct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e chlSab2.chr6 46755137 8 + 50890351 I e rheMac3.chr19 59906256 18 + 64156825 I a score=269629.000000 s hg38.chr19_GL949753v2_alt 50761 150 + 796479 gagacagagttgcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggatcacaggcatgcgccaggacgcccggctgag s panTro4.chr19 58984785 150 + 63644993 gagacagactctcgctctgtcgcccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagccttgcaaatagctgggattacaggcatgcgccaggacgcccggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55860128 150 + 60714840 gagacagagtctcgctctgtcgcccaggctggagtagagtgatgcaatctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggattacgggcatgcaccaggatgcccggctgag i ponAbe2.chr19 C 0 T 5767 s rheMac3.chr19 59906274 150 + 64156825 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcagctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i rheMac3.chr19 I 18 C 0 s macFas5.chr19 54924609 150 + 59248254 gagatagagtctcactctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcttcccaaacagctgggatcacaggcatgtgtcaccacacccggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042346 150 + 51301725 gaggtagagtctcgctctgtcgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccggttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgtgtcaccacgcccggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755145 150 + 50890351 gagatagagtctcgctctgttgtccaggctggagtagagtgacgcaatctcggctcactgcaacctccgcctctccagttcaagtgattctcctgcctcagcctcccaaacagctgggatcacaggcatgcgtcaccacacccggctgag i chlSab2.chr6 I 8 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=665006.000000 s hg38.chr19_GL949753v2_alt 50911 361 + 796479 ttttgtattattagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcccagagacagagtctccctatgttgcccaggct s panTro4.chr19 58984935 361 + 63644993 ttttgtatttttagtagagacagggtttcaccatattgg-ccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgccgggattacaggcatgagctttgtgcccag---c----------TTCTTTTTAttttttaatttttcattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcccaggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaattttttagtctttcgcagagacagagtctccctatgttgcccaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55854511 364 + 60714840 ttttgtattattagtagagacagggtttcaccatgttgg-ccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgccgggattacaggcatgagctttgcgcctggccTC----------TTCTTTTTAttttttattttttaattttattattgtgttttgagacagggtctctctcttttgcccaggttggagtgcagtggctccatcatggctcaatgtagcctcccgggctcaagtgatcctcccacctcagcctcccgagtagctgggatcacaggtgtgcaccaccacacccggctaatattttagtcttttgcagagacagagtctccctatgttgcccaggct i ponAbe2.chr19 T 5767 C 0 s rheMac3.chr19 59906424 365 + 64156825 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54924759 365 + 59248254 ttttgtgttattagtagagatggggtttcaccatgttagcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggactacaggcatgagccttgcacctggccTC----------TTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtacagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042496 365 + 51301725 ttttgtgttattagtagagacagggtttcaccatgttggcccagactggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacctggcctc----------ttctttttattttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcctcctgggctcaagtgatcctcccacctcagcctcccgagtagctggaatcacaggtgtgcaccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755295 374 + 50890351 ttttgtgttattagtagagatggggtttcaccatgttgg-ccagactggtctcaaactcctgacctcaggtgatccacccacctcagcctcccaaagtgccgggactacaggcatgagccttgcacccggccTCTTCTTTTTATTTCTTTTTAttttttaattttttattttattattgtgttttgagacagggtctctctctgttgcccaggttggagtgcagtggctccatcatggctcactgtagcttcccaggctcaagtgatcctcccacctcagcctcctgagtagctggaatcacaggtgtgcgccaccacacctggctgattttttagtcttttgcagagacagagtctccctatgttgcccaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103185486 1046 + 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=86062.000000 s hg38.chr19_GL949753v2_alt 51272 38 + 796479 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA s panTro4.chr19 58985296 38 + 63644993 CATGATCTCTTTTAATCCCTTCATGACTCCAAACAGGA i panTro4.chr19 C 0 I 25 s ponAbe2.chr19 55854875 38 + 60714840 CATGATCTCTTTTAATCCCTTAATGACTCCAAACAGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906789 38 + 64156825 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925124 38 + 59248254 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042861 38 + 51301725 catgaTCTCTTTTCATCCCTTCATGACTCCAAACAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755669 38 + 50890351 CATGATCTCTTTTCATCCCTTCATGACTCCAAACAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537408 36 - 122678785 CATGATCTCTTTTCATCCCTGGAT-ACTCC-AACAGGA i canFam3.chr1 I 1046 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I a score=169506.000000 s hg38.chr19_GL949753v2_alt 51310 108 + 796479 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCATTCCAGAAAGGGGAAAGCATA-CGTTCCTCCCTGTTTCACACATGGCTGCATTTGC s ponAbe2.chr19 55854913 108 + 60714840 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCCTCAAAACATCCAAATGGTCTTTCCAGAAAGGGGAAAGCATA-CATTCCTCCCTGTTCCACACACAGCTGCATTTGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906827 108 + 64156825 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925162 108 + 59248254 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATG-CATTCATCCCTGTTCCACACACAGCTGCCTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47042899 108 + 51301725 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGAGGAGAAAGCATA-CGTTCATCCCTGTTCCACACACAGCTGCGtttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46755707 108 + 50890351 CAAAATTTATTGTTTGGTGTCCTGTAACAAGCTTCAAAACATCCAAATGGTCATTCCAGAGGGAAGAAAGCATA-CATTCATCCCTGTTCCACACACAGCTGCGtttat i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537444 109 - 122678785 CAGAGTTTACCACTTGGTCCTCTGAAACAAGCCTCAAAGAATCCACATGGATATTCCAGAAAGGAGAAAACATACCATCCTTCCTTGCCCCCCTCACAGGTGCATCTGT i canFam3.chr1 C 0 I 344 e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=104656.000000 s hg38.chr19_GL949753v2_alt 51418 84 + 796479 TCTTCCTCCTTTTTAA------TTTTTTTTG--ATAGAGACAGGGCTGGGCTGGTTAAGAACTCTTGACCATgccgggcgcggtggctcccg s ponAbe2.chr19 55855021 87 + 60714840 TCTTCTTCCTTTTTAA---TTTTTTTTTTTG--ATAGAAACAGGGCCGGGTTGGTTAAGAACTCTTGACCATgctgggcgtggtggctcacg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59906935 88 + 64156825 TCTTCTTCCTTTGTAA--TTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925270 90 + 59248254 TCTTCTTCCTTTGTAATTTTTTTTTTTTTTT--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcggtggctcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47043007 92 + 51301725 tcttcttcctttttaattttttttttttttttaatagagacagggccaGGCTGGTTAAGAACTCTTGAccatgccaggcgcggtggctcacg i papAnu2.chr19 C 0 I 1439 s chlSab2.chr6 46755815 90 + 50890351 tcttcttcctttttaattttttttttttttt--ATAGAGACAGGGCCAGGCTGGTTAAGAACTCTTGACCATgccaggcgcagtggctcacg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=5865.000000 s hg38.chr19_GL949753v2_alt 51502 4 + 796479 cctg s ponAbe2.chr19 55855108 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907023 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54925360 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044538 4 + 51301725 cctg i papAnu2.chr19 I 1439 C 0 s chlSab2.chr6 46755905 4 + 50890351 cctg i chlSab2.chr6 C 0 I 841 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=19920.000000 s hg38.chr19_GL949753v2_alt 51506 14 + 796479 taatcccagcactt s ponAbe2.chr19 55855112 14 + 60714840 taatcccagcactt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59907027 14 + 64156825 taatcccagcactt i rheMac3.chr19 C 0 I 1595 s macFas5.chr19 54925364 14 + 59248254 taatcccagcactt i macFas5.chr19 C 0 I 2559 s papAnu2.chr19 47044542 14 + 51301725 taatcccagcactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756750 14 + 50890351 taatcccagcactt i chlSab2.chr6 I 841 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=88532.000000 s hg38.chr19_GL949753v2_alt 51520 68 + 796479 tgggaggccgaggcaggtggatcacgaggtcaggagttgaagaccagcctggccaacatggtgaaacc s ponAbe2.chr19 55855126 68 + 60714840 tcggaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaacc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59908636 68 + 64156825 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i rheMac3.chr19 I 1595 C 0 s macFas5.chr19 54927937 68 + 59248254 tgggaggccgaggcaggtggatcacaaggtcaggaattcaagacaagcctggccaacagggtgaaacc i macFas5.chr19 I 2559 C 0 s papAnu2.chr19 47044556 68 + 51301725 tgggaggccgaggcaggtggatcacgagatcaggagctcaagaccagcctggccaacatggtgaaacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756764 68 + 50890351 tgggaggccgaggcaggtggatcacgaggtcaggagttcaagacaagcctggccaacatggtgaaacc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102620191 608 - 106955855 I e panTro4.chr19 58985334 25 + 63644993 I a score=30937.000000 s hg38.chr19_GL949753v2_alt 51588 17 + 796479 ccgtctatactaaaaat s ponAbe2.chr19 55855194 17 + 60714840 ctgtctctactaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620799 17 - 106955855 ccgtctctactaaaaat i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 59908704 17 + 64156825 ctgtctctactaaaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928005 17 + 59248254 ctgtctctactaaaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044624 17 + 51301725 ctgtctctactaaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756832 17 + 50890351 ctgtctctactaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e panTro4.chr19 58985334 25 + 63644993 I a score=351569.000000 s hg38.chr19_GL949753v2_alt 51605 174 + 796479 acaaaaattagcca-ggtgtggtgatgggcgcctgtgatcccagctactcaggaggctgaggcagagaatcgcttgaacccaggaggcagagtttgcaatgagctgagatcgcaccactgcactccagcctggccacagcgcgagactcagtttcaggaaagaaaaaaaaa----agag s panTro4.chr19 58985359 173 + 63644993 acaaaaattagcca-ggcgtggtgatggccgcctgtgatcccagctactgaggaggctgaggcagagaatcacttgaacccaggaggcagaggttgcaatgagctgagatcgcgccactgcactccagcctggccacagtgcgagactcagtttcaggaaagaaaaaaaaa-----gag i panTro4.chr19 I 25 C 0 s ponAbe2.chr19 55855211 176 + 60714840 acaaaaattagcca-ggcgtggtgatgggcgcctgtaatcccagctactcaggagcctgaggcagagaatcgcttgaacccaggaggcagaggttgcaatgagctgagatagcaccactgcactccatcctggcgacagcacgagactcagtctcaggaaagaaaaaaaaa-aa-agag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620816 178 - 106955855 acaaatattagccagggagtggtgatgagcgcctgtaatcccagctactcgggaggctgaggcagagaatcgcttgaacccaggaggcggaggttgcaatgagctgagatcgcgccactgcactccagcctggcgacagcacaagactcggtctcaggaaagaataaaaaa-aagagag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908721 169 + 64156825 acgaaaattggcca-ggcgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctgtcaacacagcgagactcattctcagaaag-aaaaaaaaa-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928022 170 + 59248254 acgaaaattagcca-ggtgtggtgccgggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacacagcgagactcagtctcagaaagaaaaaaaaaa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044641 170 + 51301725 acgaaaattagcca-ggtgtggtgacgggcgcctgtcattccagctactcgggaggctaaagcagagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacaaagcgagactcagtctcagaaagaaaaaaaaag-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46756849 178 + 50890351 acgaaaattagcca-ggtgtggtgactggcgcctgtagttccagctactcgggaggctgaagcagagaatcacttgaacccgagaggcagaggttgcagtgagccaagatcatgccagtgcactctagcctggcaacagagcgagactcagtctcagaaagaaaaaaaaaaaaagaaag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19537553 344 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=644422.000000 s hg38.chr19_GL949753v2_alt 51779 243 + 796479 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----GAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGAGAAGTTACCAGGCGTTTGTGCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac s panTro4.chr19 58985532 243 + 63644993 aaagaaaagaaAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTATCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTGT-----AAACAGTTTTAGGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTCCTACTATTACATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855387 239 + 60714840 aaagaaaaGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGAGATTGATCTAACTCAAAGAAAGTTAGC----CCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGCAG-GAAAAA-GGGGAAGTTACCAGGCGTTTGTGCTAGTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102620994 243 - 106955855 aaagaaaAGAAAAAACATAATATCAAGCCTGTTTATGAACATTATCATAATAGTGAGATTGATCTAACCCAAAGAAAGTTAGTTAGGCCAGTGTGTCTGACAGA----TTGCCTCTTTTCCC------CCTGTAT-----GAACAGTTTTATGTGTCAGCAG-GAAAAA-AGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATCCATAAACTGACACTTCAAGTTTTGCAAAAGGAAATTGTGaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59908890 244 + 64156825 aaagaagagaaaaaaCATAATATCAAGCCTGTTTATGGACATTATCATAATAATGGCATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAAGGGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54928192 243 + 59248254 aaagaagagaaaaaACATAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGCTCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAT-----GAACAGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATGAGCCAATGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47044811 243 + 51301725 aaagaagagaaaaaacataatATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAgaga----tttcctctttttcc------cctGTAT-----GAACAGTTTTATGTTTCAGTAG-GAAGGA-GGGGAAGTTACCAGGCATTTGTGCTACTATTGCATCCACGAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAACTGTGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757027 243 + 50890351 aaagaagagaaaaaacatAATATCAAGCCTGTTTATGAACATTATCATAATAATGACATTGATCTAACTCAAAGAAAGTTAGTTAGGCCTGTGTCTCTGAGAGA----TTTCCTCTTTTTCC------CCTGTAG-----GAACCGTTTTATGTCTCAGTAG-GAAGAA-GGGGAAGTTACCAGGCGTTTGTGCTACTATTGCATCCATAAGCCAGTGCATAAACTGACATTTCAAGTTTTGCAAAAGGAAATTGTGaac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19537897 254 - 122678785 TAAGATCTCTTTAAAAATAACATCAAGCCTGCTTACAGAATTTATTGGAAGAGAGAGATTGTTCTAACTCAGCAGATACTGGTTGGACCTGTGTTTCTAAGAGATTTGTTTACTCTTTTTCCTTTTTGCCTATGTTAATGGAACAGTTTTGTGTCTTAGTAGTGAAGAG-GGAAAAGTTACCAGGCCTTTGTGCTAAAAT----TCCATGGG-CACTCCAAAATATTACGTTGCACGGTTTGCAAAAGGCAAGTGATAac i canFam3.chr1 I 344 I 2530 e calJac3.chr22 45321063 9366 + 49145316 I a score=152889.000000 s hg38.chr19_GL949753v2_alt 52022 73 + 796479 acccaaaatgttcaaacaacgtaagtgtccatccatggaagaatggataaacacagtgtgctctatatattca s panTro4.chr19 58985775 73 + 63644993 acccaaaatgttcaaacaacgtaagtgtccatccgtggaagaatggataaacacagtgtgctctatatattca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855626 73 + 60714840 acccgaaaggttcaaacaacgtaagtgtccatccatggaagaatgcataaacacagtgtgctctatacattca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621237 73 - 106955855 acccgaaaggttcaaacaacataagtgtccatccatggaaaaatggataagcacagtgtgctctatacattca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59909134 70 + 64156825 GCTCAAAAGGTTCAAACA---TAAGTGTCCATCCATGGCATGATGGACAAACACAGTGTGCTCCATATATTCA i rheMac3.chr19 C 0 I 3434 s macFas5.chr19 54928435 70 + 59248254 actcaaaaggttcaaaca---taagtgtccatccatggcatgatggataaacatagtgtgctccatatattca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045054 70 + 51301725 ACCCAAAAGGTTCAAACA---TAAGTGTCCATccatggaagaatggataaacataGTGTGCTCCATATAttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757270 70 + 50890351 acccaaaaggttcaaaca---taagtgtccatctatggcagaatggataaacatagtgtactccatatattca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=30061.000000 s hg38.chr19_GL949753v2_alt 52095 22 + 796479 atgggattttTCTTCtttttct s panTro4.chr19 58985848 22 + 63644993 atgggattttTCTTCtttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855699 22 + 60714840 atgggatttttttTCtttttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102621310 22 - 106955855 atgggatttttttTCTTTTTCT i nomLeu3.chr10 C 0 I 47 s macFas5.chr19 54928505 15 + 59248254 acgggattttttctt------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045124 22 + 51301725 atgagatttttttttcttttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757340 22 + 50890351 atgggattttttttctttttct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=45251.000000 s hg38.chr19_GL949753v2_alt 52117 46 + 796479 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg s panTro4.chr19 58985870 46 + 63644993 tc-gttt-tttttttttttttttttgagacatagtttcattcttgttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855721 47 + 60714840 tcggttt-tgttttcttttttttttgagacatagtttcattcttgttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54928520 40 + 59248254 --------ttcttttttttttttctgagacagagtttcgctcttgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045146 44 + 51301725 ---tttc-tttttttttttttttctgagacagagtttcgctcttgttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757362 45 + 50890351 ---tttcttttttttttttttttctgagacagagtttcgctcttgttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621332 47 - 106955855 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=186645.000000 s hg38.chr19_GL949753v2_alt 52163 103 + 796479 cccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag s panTro4.chr19 58985916 103 + 63644993 cccaggctggagtgcaatggcgcgatctcggctcactgcaatctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55855768 103 + 60714840 cccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcatggattcaagtgattcttgtgcctcagcctcccaagtagctgggattacag i ponAbe2.chr19 C 0 I 7657 s nomLeu3.chr10 102621379 103 - 106955855 cccaggctggagtgcagtggcgcggtcttagctcaccacaacctctgcctcacgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacag i nomLeu3.chr10 I 47 I 89 s macFas5.chr19 54928560 103 + 59248254 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47045190 103 + 51301725 tccaggctggagggcaatggcgcgatcttggctcactgcaacctccgcctcgcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46757407 103 + 50890351 tccaggctggagtgcaatggcgcgatcttggctcactgcaacctccacctcgcgggttcaagtgattctcctgcctcagcctcctaagtagctgggattacag i chlSab2.chr6 C 0 I 3292 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2980.000000 s hg38.chr19_GL949753v2_alt 52266 18 + 796479 ctcac-tgcaacctccgcc s panTro4.chr19 58986019 18 + 63644993 ctcac-tgcaacctctgcc i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928663 18 + 59248254 -gcatgcgccaacacagcc i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47045293 18 + 51301725 -gcatgtgccaacacagcc i papAnu2.chr19 C 0 I 83 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2969.000000 s hg38.chr19_GL949753v2_alt 52284 37 + 796479 ttgcaggttcaagtgattctcct---------------------------gcctcagcctcccA s panTro4.chr19 58986037 37 + 63644993 tcgcaggttcaagtgattctcct---------------------------gcctcagcctcccA i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928689 64 + 59248254 ttgtgggtttttttgttttttttgtttttttgttttttttttgagacagagtcttgctctctca i macFas5.chr19 I 8 I 15 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045311 83 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=14017.000000 s hg38.chr19_GL949753v2_alt 52321 43 + 796479 agtagctgggattacagctcactgcaa---cctccgccttgtgggt s panTro4.chr19 58986074 43 + 63644993 agtagctgggattacagctcactgcaa---cctccgccttgtgggt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54928768 45 + 59248254 agtggc-atgatctccactcactgcaaactccaccgccttctgggt i macFas5.chr19 I 15 C 0 s papAnu2.chr19 47045394 45 + 51301725 agtggc-gtgatctccactcactgcaaactccaccgcctcccgggt i papAnu2.chr19 I 83 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102621482 89 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=71112.000000 s hg38.chr19_GL949753v2_alt 52364 170 + 796479 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccatcttagcct-ccaaaat---------------------------------gct s panTro4.chr19 58986117 170 + 63644993 tcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccagctaattttgt----attttttagtagagacagggtttcaccatgttggtcaggctgg------------------------------tcttgaactcccc-acctcaggtgatccgcccaccttagccc-ccaaagt---------------------------------gct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621571 221 - 106955855 tcaggtgatccgcccacctcagcctcccaaagtgct-------------TTTTTCTTTTTCTTTTCTTCCtttttt----tttttttttttgagacagggtctcactctgctgcccaggctggagtgcaatgatgtgatcctagttcactccagcatcaacgccccgggctcaagtgatcctcccacctctgcct-cccgagtagctggcactacaggtgcacaccaccatgcccagcT i nomLeu3.chr10 I 89 C 0 s macFas5.chr19 54928813 173 + 59248254 tcacaccattctcctgccccagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttttgtgtgtttttagtagacacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccacccgccttggcctcccaaagt---------------------------------gct i macFas5.chr19 C 0 I 31 s papAnu2.chr19 47045439 173 + 51301725 tcacgccattctcctgcctcagcctccctagaaactgggactacaggcgcccaccaccacacctggctaatttttgtgggtgtttttagtagagacggggtttcaccgtttttgccaggatgg------------------------------tctcgatctcctg-acctc--gtgatccgcccaccttggcctcccgaagt---------------------------------gct i papAnu2.chr19 C 0 I 31 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=2512.000000 s hg38.chr19_GL949753v2_alt 52534 26 + 796479 tttttctttttcttttctttctttct s panTro4.chr19 58986287 25 + 63644993 TTTTTCTTTTTCTTTTCtttctttc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621792 25 - 106955855 CATTGTTTTTTGTTGTTGttgtttt- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045612 31 + 51301725 I e macFas5.chr19 54928986 31 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=25587.000000 s hg38.chr19_GL949753v2_alt 52560 53 + 796479 tttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg s panTro4.chr19 58986312 52 + 63644993 -ttttttttttttttttttttgaggcagggtctcgctc-tgctgcccaggctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621817 54 - 106955855 taatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54929017 53 + 59248254 ctaattttgtattttttagtagagacagggtttcacca-tgttggtcaggctgg i macFas5.chr19 I 31 I 5 s papAnu2.chr19 47045643 53 + 51301725 ctaattttatattttttagtagagacagggtttcacca-tgttggtcaggctgg i papAnu2.chr19 I 31 I 5 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=5943.000000 s hg38.chr19_GL949753v2_alt 52613 35 + 796479 agtgcaatgatgtgatcctagttcattccagcatc s panTro4.chr19 58986364 35 + 63644993 agtgcaatgatgtgatcctagttcactccagcatc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621871 35 - 106955855 agtgcaatggcacaatctccgctcactgcaacccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47045696 5 + 51301725 I e macFas5.chr19 54929070 5 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=68009.000000 s hg38.chr19_GL949753v2_alt 52648 158 + 796479 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggactacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg s panTro4.chr19 58986399 158 + 63644993 aactccctgggctcaggtgatcctcccacctctgcctcccgagtagctgggattacagctgcacaccaccatgcccagctcatttttgttgttgttgttgtttttaatatttatttatttattttgagatggagtttcgctcttgttgcccagactgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102621906 131 - 106955855 tgcctcccgggttcaagcgattctcctgcctcagcctcccaagtacctgggattacaggcacctgccaccacgcctggctaattttta----------tatttttaata----------------gaaatggggtttcac-cctattggccaaactgg i nomLeu3.chr10 C 0 I 1486 s macFas5.chr19 54929075 148 + 59248254 aactcccc-acctcaggtgatcagcccacctcggcctcccaaagtgctgggattacagctgtgagccaccgcgcctggccTTTTCTT-------tttttcttttctttctttcttttta-tttttgagacagggtttcac-tctgctgcccaggctgg i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47045701 149 + 51301725 aactcccc-acctcaggtgatcagcccacctcagcctcccaaagtgctgggattacagctgtaagccaccgcacccggccttttttc-------tttttcttttctttctttctttttattttttgagacagggtctcac-tctgctgcccaggctgg i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=63814.000000 s hg38.chr19_GL949753v2_alt 52806 164 + 796479 agtgcaatggcatgatctcggctcactgcaacctctgactcctgggttcaagcgattctcttgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagaaatggggtttcac-cctattggccaggct s panTro4.chr19 58986557 164 + 63644993 agtgcaatggcatgatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccaccacgcatggctaatttt--------tatatttttag------------tagagatggggtttcac-cctattggccaggct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929223 185 + 59248254 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcggcctcctgattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i macFas5.chr19 C 0 I 82 s papAnu2.chr19 47045850 185 + 51301725 agtgcaatgatgtgatcctagttcactccagcctcaactccctgggctcaagtgatccttccacctcagcctcccaattagctgggacgacaggtgcacaccaccatgcccagctcatttttttgtttgtttgtttttaatatttatttatttagagatggagtttcgctcttgttgcccaggct i papAnu2.chr19 C 0 I 82 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=3693.000000 s hg38.chr19_GL949753v2_alt 52970 39 + 796479 gttctcgaactccttacgtcaggtcattgcaaaaaaagt s panTro4.chr19 58986721 39 + 63644993 gttctcgaactccttacgtcaggtcattgcaaaaaaagt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046035 82 + 51301725 I e macFas5.chr19 54929408 82 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=55411.000000 s hg38.chr19_GL949753v2_alt 53009 172 + 796479 gctgggattacaggcgtgagccaccatgcccagcctcatttttgta-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacactgtgctcggcct s panTro4.chr19 58986760 172 + 63644993 ggtgggattacaggcgtgagccaccatgcccagcctcattttttaa-ttttttgtagagacagggtttcaccatgttgcccaggctagtctcgaactcctgggctcaagcgatctgcctgcctcagactctcaaagtgctgggattacaggtgtgagacattgtgctcggGCt i panTro4.chr19 C 0 C 0 s macFas5.chr19 54929490 152 + 59248254 gctgggattacaggcgcccgccaccacgcctgg-ctaatttttgta-tttttagtagagatggggtttcacccta-----caggctggtctcaaactccttacatcaggtcat-----tgc---------aaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i macFas5.chr19 I 82 I 1977 s papAnu2.chr19 47046117 154 + 51301725 gctgggattacaggcacccgcctccacgcctgg-ctaatttttgtattttttagtagagatggggtttcacccta-----cagactggtctcaaactccttacatCAGGTCAT-----Tgc--------aaaaaagtgctgggattacaggcgtgagtcaccgtgcccagtct i papAnu2.chr19 I 82 I 2062 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56751.000000 s hg38.chr19_GL949753v2_alt 53181 632 + 796479 acagtgggattttagccataaaaaggaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcaaaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatagagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggtcaacatggtgaaaccttgtctctactaaaaaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccgaaaaaaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatacagagttattggttagagggtgtagcgttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctgggatatctggttaaac s panTro4.chr19 58986932 624 + 63644993 acagtgggattttagccataaaaaagaaaggaaatctgacatatcctacaatatagatgtagctcgaggatattatgctgagtaaactaagtcaggcacaaaagaacaagtgttatgattccactcatacatcctagaataagcaaattcatacagataaaaattagaatgggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacaaagtcaggagatcgagaccagcctggccaacatggtgaaaccttgtctctact---aaaaaaaaaaaaaaaaacttagccaggcatggtggtgagcgccagtgatcccagctactcgggagggagaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagattaggccactgtactccagcctgggtgacgaagcaagactccatctccg----aaaaaaaaaaaaaaagaaattagaatggaggttaccaggggctgggaggaccgcggcaaatagagagttattggttagagggtgtagagttcatattgggaattgtgattgttaatttgatttatcagctagaccaggccacaggatgctggg-tatctggttaaac i panTro4.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102622037 1486 - 106955855 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=37464.000000 s hg38.chr19_GL949753v2_alt 53813 145 + 796479 attatttctgggcgtgtctgtgagggtgtttttagaaagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca s panTro4.chr19 58987556 145 + 63644993 attatttctgggcgtgtctgtgagggcgtttttagagagatcagcatttgaatctaatgctgagtcgggcaggttgg-ccttcctaatggaggtgggtattctgctgagggccaggatgggagaaaaaggtggCAGAGCCACcaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102623523 145 - 106955855 attatttctgggtgtgtctgtg-gggtgtttttagagagatcagcgtttgaatccaatgctgagtcgggcaggttggcccttcctaatggaggtgggcattctgctgaaggccaggatgggagaaaaaggtggaagaGCCACcaca i nomLeu3.chr10 I 1486 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e ponAbe2.chr19 55855871 7657 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=56020.000000 s hg38.chr19_GL949753v2_alt 53958 100 + 796479 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc s panTro4.chr19 58987701 100 + 63644993 gtggctcacgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagtttgagaccagcctgagtaacatagtgagatccc i panTro4.chr19 C 0 I 136 s ponAbe2.chr19 55863528 100 + 60714840 gtggctcacgcctgtaatctcagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i ponAbe2.chr19 I 7657 C 0 s nomLeu3.chr10 102623668 100 - 106955855 gtggcttatgcctgtaatcccagcactttgggaggccaaggcagaagggctgcttgaggccaggagttcgagaccagcctgagtaacatagtgagatccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=210134.000000 s hg38.chr19_GL949753v2_alt 54058 547 + 796479 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggtgggcacctgtaatctcagctacccaggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaaggagggaaggaaggaaggaagtaaggaaggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagaaagagaaagaaagaaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagcaagcaagcaagcaagcaggcaagcaagcgggggctcacg s panTro4.chr19 58987937 464 + 63644993 gtctctacaaaaaatttaaaaaTTACACGgggcactgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctactaaaaagtacaaaaaatcagccgggtgtgtggcgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcccaggaggtggaggctgcagtgagctgtggtcataccactgcactccagcctgggtacagagtgagactttgtctcaaaaaaaggaaaGgga------------------------aggaaggaaggaagggaaagagagagaggaaggaaggaatgaaggagagagag------------gaaggaaggaat-----------------------------------------------gaaagaaaggaaggaaggaaggaaggaaggaaggaagcaggcaagcaagcgggggctcacg i panTro4.chr19 I 136 C 0 s ponAbe2.chr19 55863628 458 + 60714840 atctctacaaaaaatttaaaaattacacgggGCAGTgtggctcacgcctgtaatcccagcactttgggaggctgaggctgaggcgggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctttactaaaaagtacaaaaaatcagccaggtgtgtggggggcacctgtaatcccaactacccgggaggctgaggcaggagaattgcttgagcccgggaggtggaggctgcagtgagctgtggtcatatcactgcactccagcctgggtacagagtgagaccttgtctcaaaaaaaGGAgagggaaggaaggaagga------------aggaaagaaggaagggaaagagagacaggaaggaaggaatgaaggagaaaga-------------gaaagaaggaaa-----------------------------------------------aagaaaaagaaagaaagaaagggaa-----------------aagcaagcaggggctcacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102623768 439 - 106955855 gtctctacaaaaaatttaaaaattaCACGgggcactgtggctcatgcctgtaatcccagcactttgggaggctgaggctgaggcaggcagatcacctgaggtgatcacctgagggagctcaagaccagcctggccaacatgatgaaaccccgtctctaataaaaagtacaaaaaatcagcagggtgtgtggtgggcacctgtaatcccagctacccgggaggctgaggcaggagaattgcttgagcctgggaggtggaggctgcagtgagctgtggtcataccactgtactccagcctgggtacagagttagaccttgtctcaaaaaaaggaaagggaaggaaggaagga------------aggaaggaaggaagg------aaggaaggaaggaagg---gagggagggaggg------------aagggaaggaaa-----------------------------------------------gagagagaggaaggaaggaatgaag-----------------gaGAAAGA----------- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e macFas5.chr19 54929642 1977 + 59248254 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=195365.000000 s hg38.chr19_GL949753v2_alt 54605 357 + 796479 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagcagagatcgcacc-actgcactccagcctgggcgacagagcgagactccatctcaaaaaaa------------aaaaaaagaaagaaagagagagagag---------gaaggaagggaggaaggaaggaaggaaggaaggaaggaagg--------------------------------------------------aagggaaggagaaaaagaaagaaaggaaggaaggaag-----------------------------------gaag s panTro4.chr19 58988401 336 + 63644993 cctgtaatcccagcactttgggaggccgaggcgggcagatcaa--gaagtcaggagatggagaccatcctggctaacacagtgaaac-------ctacgaaaaa---------------agccgggcatggtggcgggcgcctgtagtcccagctactcgggagg--ctgaggcaggagaatggcgtgaacccgggag-gcggagcttgcagtgagccgagatcgcacc-actgcactccagcctgggcgacagagtgagactccgtctcaaaaaaa------------aaaaaaa-aaagaaataaagaaagag---------------agagag----------aggaaggaaggaaggaagg--------------------------------------------------aaggaaaggagaaaaagaaagaaaggaaggaaggaag--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864086 394 + 60714840 cctgtaataccagcactttgggaggccaaggcgga-ggatcac--gaggtcaggagattgagaccatcctggctaacacggtgaaac-------ctacgaaaaa-----tacaaaagttagccgggcatggtggcaggcgcctgtagtcccagctacttgggagg--ctgaggcaggagaatggcatgaagctgggag-gcggagcttgcagtgagctgagatcgtgccaactgcactcccacctgggggacagagcgagactccataaaaaaaaaa------------aaaaaaagaaataaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg----------------agggaaggaaaaaagaaggaaaga---------aaaggaaagaaggaaagaaaagaaagaaaagaaagaaa-----------------------------------gaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624207 443 - 106955855 -----AAAAccagcactttgggaggccaaggcgggcgaatcac--gaggtcaggagatcgagaccatcctggctaacacagtgaaac-------ctatgaaaaa-----tacaaaagttagccaggcatggtggcaggcgcctgtagtcctagctacttgggagg--ctgaggcaggagaatggcgtgaacctgggag-gcggaacttgcagtgagctgagatcgtgccaatggcactccagcctgggggacagagcgagaatctat-----aaaaa------------aaagaaagaaagaaagaaagagagag-------aggaaggaaggaaggaaggaaggaaggaaggaaggagaaaaga-gagatagagat-gaaagaaagaaagaaaagaaagaaagaaaaagaaagaaagaaaaaaagaaaaagaaagaaaagaaagaaagaaaaagaaagaaaaaaagaaaaagaaagaaagaaaaagaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54931619 449 + 59248254 cctgtaatcccagcactttgagaggcagaggcaggtggatcacttaagcccaggagtttgagtctagcctgggcaacatagcaagaccctgtctctacaaagaaaaaaataccaaacttagccaggcatggtagcatgtgcttataaccccacctacttagcagggactgaggca-gaggattgcctgagcccgggggagtgaaggctgcagtgagctgtggtcatgcc-actgcattccagcctgggtgacagagtgagaccttgtctcaagaaaaggaaagggaaggaagaaaGgaaggaaggagagagagagagagaaaagaaagaaagagaaaaagagaaagagagagagaggaaggaaggagaaagagagagagagagagaaagaaaaagaaaagaaagaaagaaaaagaaagaaagagagaaagaaagagaaagaaagaaaaaga---------------------------------------- i macFas5.chr19 I 1977 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46757510 3292 + 50890351 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=6413.000000 s hg38.chr19_GL949753v2_alt 54962 10 + 796479 aaagaaag--------------ag s panTro4.chr19 58988737 10 + 63644993 AAAGAAAG--------------AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864480 10 + 60714840 gaaaggag--------------ag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624650 24 - 106955855 aaagaaagaaaaaaagaaagGAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54932068 10 + 59248254 aaagaaaa--------------ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760802 10 + 50890351 aaagaaaa--------------ag i chlSab2.chr6 I 3292 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I e rheMac3.chr19 59909204 3434 + 64156825 I a score=148730.000000 s hg38.chr19_GL949753v2_alt 54972 82 + 796479 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT s panTro4.chr19 58988747 82 + 63644993 GCTTTAGTGTAGATAGTGGGGATGGTTACACAACGGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864490 82 + 60714840 gttttagtatagatagtGGTGATGGTTACAAAACAGCCTCAATTTACTTTATAGTTATCTATTTGACACTAAATTTTTATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102624674 82 - 106955855 GTTTTAGTGTAGATAGTGGTGATGGTTACACAGCAGCCTCAATTTACTTCATAGTTATCTATTTGACACTAAAttttttttt i nomLeu3.chr10 C 0 I 358 s rheMac3.chr19 59912638 82 + 64156825 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i rheMac3.chr19 I 3434 C 0 s macFas5.chr19 54932078 82 + 59248254 gttttagtatagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760812 82 + 50890351 gttttagtgtagatagtggtgatggttacacaacaacctcaatttactttatAGTTATCTATTTGGCACTAAATTTTTATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=26342.000000 s hg38.chr19_GL949753v2_alt 55054 20 + 796479 ATGGTATTAAGGTTTCTGgg s panTro4.chr19 58988829 20 + 63644993 ATGGTATTAAGGTTTCTGgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864572 20 + 60714840 ATGGTATTAAGGTTTCTGgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912720 20 + 64156825 ATGGTGTTAGGGTTTCTGgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932160 20 + 59248254 ATGGTGTTAGGGTTTCTGgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46760894 20 + 50890351 ATGGTGTTAAGGTTTCTGgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I e papAnu2.chr19 47046271 2062 + 51301725 I a score=339079.000000 s hg38.chr19_GL949753v2_alt 55074 187 + 796479 ccaggcacagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-cactgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag s panTro4.chr19 58988849 187 + 63644993 ccaggcgcagtggctcacatctgtaatcccagcactttgagagactgaggtgggcagatcacctgaggtcgggagttcgagaccagcctggccaacatggtgaaa-ccccgtctctactaaaaatacaaaaattaactaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864592 187 + 60714840 ccaggcgcagtggctcaggtctgtaatcccagcactttgagaggctgaggtgggaagatcacctgaagtcgggagttcgagaccagcctggccaacatggtgaaa-ctctgtctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctgtaatccagttactcaggaggctgaagcag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59912740 187 + 64156825 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggtgcacccctttaatccagttactcaggaggctgaagcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932180 187 + 59248254 ccaggcacagtggctcacgcctgtaatcccaatactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccaggcgtggtggcgcacccctttaatccagttactcaggaggctgaagcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048333 187 + 51301725 ccaggcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatacaaaaattaaccagacatggtggcacacccctttaatccagttactcaggaggctgaagcag i papAnu2.chr19 I 2062 C 0 s chlSab2.chr6 46760914 188 + 50890351 ccacgcacagtggctcacgcctgtaatcccagtactttgggaggctgaggctggcagatcacctgaggtcaggagttcgagaccagactggccaacatggtgaaacccccatctctactaaaaatacaaaaattaaccaggcatggtggcgcacccctttaatccagttactcaggaggctgaagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e nomLeu3.chr10 102624756 358 - 106955855 I a score=198623.000000 s hg38.chr19_GL949753v2_alt 55261 100 + 796479 gagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcatgccattgcactacagcctgggcaacaagagcaaaactctgtctcaaa--aa--aa s panTro4.chr19 58989036 100 + 63644993 gagaatcgcttgaacccaggaggcagaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaaa--aa--aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864779 102 + 60714840 gaggatcgcttgaacccaggagccggaggttgtggtgagccgagatcacgccattgcactccagcctgggcaacaagagcaaaaccgtgtctcaaaataa--aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625114 96 - 106955855 gagaatcgcttgaacccgggaggcggaggttgtggtgagccgagatcatgccattgcactccagcctgggcaacaagagcaaaaccctgtctcaat-------- i nomLeu3.chr10 I 358 C 0 s rheMac3.chr19 59912927 96 + 64156825 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctc--a--aa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932367 98 + 59248254 gagaatctcttgaacccaggaggcaggggttgcagtgagttgagatcacgccactgcactccaacctgggcaagaagagtgaaaccctgcctcaaa--aa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048520 97 + 51301725 gagaatctcttgaacccgggaggcgggggttgcagtgagtcgagatcacgccattgcactccagcctgggcaagaagagtgaaaccctgcctc-aa--aa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761102 100 + 50890351 gagaatctcttgaacccgggaggcgggggttgcagtgagttgagatcacgccattgcattccagcctgggcaagaagagtgaaaccctgcctcaaa--aaaa-- i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=34925.000000 s hg38.chr19_GL949753v2_alt 55361 25 + 796479 taaaataaaataaaataaaataaGG s panTro4.chr19 58989136 25 + 63644993 taaaataaaataaaataaaataaGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864881 25 + 60714840 taaaataaaataaaataaaataaGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625210 24 - 106955855 -aaaataaaataaaataaaataaGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913023 25 + 64156825 aaaaaaaaaaaaaaaaaagataaGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932465 25 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47048617 25 + 51301725 aaaaaaaaaaaaaaaaaaaaaaagg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19538151 2530 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=1385178.000000 s hg38.chr19_GL949753v2_alt 55386 670 + 796479 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCGTTTCC---AGGGAATGTCTGCACTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTTA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACtc s panTro4.chr19 58989161 669 + 63644993 TTTCTATTCTGAATACTTTTACTTACACACAAAAAG-CAGAGTTGATCCTGAGAAAAGG----GATAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACTACAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCTAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCTACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTTTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTGCACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGTGTTCGTATTGAAGAGATGAAAGCACTTCAttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55864906 670 + 60714840 TTTCTATTCTGAATATTTTTACTTACATACAAAAAGTCAGAGTTGATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACAAAGTTGAAACTAGAGGAGTTGAAGTTTGCAGAGCACTCATTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TA-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCCTGATTTTCTGCAGTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GCCCTCCCAGAGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCAGAGTGTGGGCAGTAACAGCCTT-TCCTAG-CCTTTCAGTTTCCCCTCCCATACCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTTCTTACACACACCAGTGTTCGAGCACTTGACTCACAGGAAATGCTCCTCTGTATCAGGCAGATTTCAGGTATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 102625234 671 - 106955855 tttctattctgaatacttttacttacagacaaaaagtcagagttgatcctgagaaaagg----ggtaagccaatgaagc-caggtggtggaggcattcagcaaaactcacgaagttgaaactagaggagttgaagtttgcagagcactCGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCATGTGC-------------TCAGTAAGCCAAAGTTGATGTTAT------TATTTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATTCTCCGCAGTCCCAGTGGTTAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGGGATCATGATGGCTCCTCA------GGTCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTTGAGTCGTCACTGTCTCTCTCCCACCCAAGAGTGTGGGCAGTAACAGCTTT-TCCTAG-ACTTTCAGTTCCCCCTCCCATATCCACATTCAGGAAACA-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCATATTGAAGAGATGAAAGCACTTCACtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913048 670 + 64156825 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAACAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGATGTTGCTGATTGCAACATGCTCCTTACACACACCAGCGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54932490 670 + 59248254 TTTCTATTCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCGCTTGTTTCC---AGGGAGTGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGTTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCATGATATTCTGCATTCCCAGTGGATAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGACTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCGCAGATGGGAGAAGAGCTGGAGTCGTCCCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGGCGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGTATTTGACTCACAGGAAATGCTCCTCTGTCTCAGGCAGATTTCAGGCATCAAACAGGTAA--------CCCCGAAAATGCTTCAGACTTGGCCCTGAAGGGTTCGTATTGAAGAGATGAAAGCACTTCACTC i macFas5.chr19 C 0 I 12 s papAnu2.chr19 47048642 670 + 51301725 tttctattCTGAATACTTTTACTTACACACAAAAAGTCAGAGTTTATCCTGAGAAAAGG----GGTAAGCCAATGAAGC-CAGGTGGTGGAGGCATTCAGCAAAACTCACGAAGTTGAAACCAGAGGAGTTGAAGCTTGCAGAGCACTTGTTTCC---AGGGAATGTCTGCAGTGCACTCAGCAGGACGTCTCACTCCTCCCGTGTTC-------------TCAGTAAGCCAAAGCTGATGTTAT------TT-TTTCCATCCCCAGCCCAA----------CTA---------------------------------------TCCCACCAGTTCCGTGATATTCTGCAGTCCCAGTGGACAGCCCTGTGAGACTTACTGAAACAGAGGAGGGAAAGCAGCTTAGAGATCATGATGGCTTCTCA------GCCCTCCCAGGGTCCGTCTTGGGTTCTGCAGTCCACAGATGGGAGAAGAGCTGGAGTCGTCGCTGCCTCTCTCCCACCCCGGAGTGGAAGCAGTAACAGCCTTGTCCTAG-CCTTTCAGTT-CCCCTCCCATATCCACATTCAGGAAACG-TGTTGACGTTGCTGATTGCAACATGCTCCTTACACACACCAGTGTTTGAGCACTTGGCTCACAGGAAATGCTCCTCTGTCTCAGGTAGATTTCAGGCATCAAATAGGTAA--------CCCTGAAAATGCTTCAGACTTGGCCTTGAAGGATTCGTATTGAAGAGATGAAAGCACtccgctc i papAnu2.chr19 C 0 I 311 s canFam3.chr1 19540681 751 - 122678785 tttctattgtaagcacttttctttaaggaaaaaaggtt-gagtctatattaaaaacaaaacacattaagccaataaagtacaggtagcaaaggcattcagcagaaaccctgaacttggaacaagactaatcgaaatttgtaaagcaccgGCTTACATTATGTAGCATATGCATTGCACTCAGCGAGATTTCTTTTTTTTTTTTTTTTTAAGATTTCTGCAGCCGATAAACCAAAGCTGATGTTTTATTTTCTC-TTTCCATCCCCAGTCCAAATCTCTtaccctacttgatcttagccaagagacagagaagcaatACCAAACCTCTTACCAATTCTATCGTTTTCTGTGGTCCCAATGTGT-GCCCTGTGACACTTACTGAGACAGAGGAGTGGGAGTAGTTGGGAAATCATGGCAGCACGTCACTTTCTGCCTGTCCAACGCCTACTTTCAGTTCTGCAGTCCACGGGTGGGCGAGGAGCTGGGGTGGCCATGGCCTTGCCCTGAATCCACAGTGTCGA-AGTAATGATTTT-TCTCAGACTTTTCAGTTCCTCCTTCCATG-CCGCTTTCTGAAAATGTTGTTGGTGCTGCCGATTGCAACATACTCTTTG--CACACTTGGCTTCAAAGACTTGGCTCACAGAAAGTCCTCATCTGTC----ACAGATTTCAGGCATCAAATGTGTGACGCCCCCTCCCCCCAGATGCCCAAGGCTTGAGCCTGAAGAGTTCCTA-AGAGGAGATAAAGGTACCTCACTG i canFam3.chr1 I 2530 C 0 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=3008.000000 s hg38.chr19_GL949753v2_alt 56056 2 + 796479 tt s panTro4.chr19 58989830 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865580 2 + 60714840 tt i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 102625905 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913718 1 + 64156825 -t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933172 1 + 59248254 -t i macFas5.chr19 I 12 C 0 s papAnu2.chr19 47049623 1 + 51301725 -t i papAnu2.chr19 I 311 C 0 s canFam3.chr1 19541432 2 - 122678785 TT i canFam3.chr1 C 0 I 22356 e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=456377.000000 s hg38.chr19_GL949753v2_alt 56058 274 + 796479 tttttttttttt-gagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcgcatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca s panTro4.chr19 58989832 275 + 63644993 tttttttttttttgagatggtgtctggttctgttacctgggctggagtccagtggcacgatctcaggtcattgcaacttcagcctcctgggttcaagcaattctccggcctcagcctcccaagtagctgggattataggcacatgccaccatgcccggctaatgtttgtatttttagttaagatgaggtttca-caagttagctgggctagtcttgaactcctcgcctcaagtgatccacctgcctcggcctcccaaactgctgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865582 275 + 60714840 tttttttttttttgagatggtgtctggttctgttacccaggctggagtccagtggcacgatctcagctcattgcaacttcagcttcctgggttcaagcaattctccagcctcagcctcccaagtagctgggattataggtgcatgccaccatgcccagctaatgtttgtatttttagttaagatgaggtttca-caagttagccaggctagtcttgaactcctggcctcaagtgatccacctgcctcagcctcccaaactgctgggattacagtca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102625907 273 - 106955855 ttttttttttt--gagatggtgtctggttctgtcacccaggctatagtccagtggcacgatctcagctcattgcaactttagcctcctgggttcaagtgattctcctgcctcagcct-ccaagtagctgggattacaggcgcatgccaccatgcccaactaatgtttgtatttttagttaagacgaggtttcaccaagttggctgagctggtctcaaactcctggcctcaagtgatccacctgcctcagcctcccagactgctgggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913719 273 + 64156825 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggctcattgcaacttcagcctcctgtgttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933173 273 + 59248254 tttttttttttttgagatggaatctgattctgtcacctggactggagtccagtggcgcaatctcggttcattgcaacttcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggctcatgccactacacccggc---tgtttgtatttttagttaagatgaggtttcaccaagttggccaggctggtctctaactcctggcctcaagtgatccacttgcctcggcctccccaactgctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049624 273 + 51301725 tttttttttttttgagatggaatctggtcctgtcacctggactggagtccagtggtgcaatctcggctcattgcaacctcagcctcctgggttcaagtgattctcctgcctcagcctcccaaggagctgggattacaggtgcatgccaccacacctggc---tgtttgtatttttagttaagatgaggtttcaccaagttggtcgggctggtctcgaactcctggcctcaagtgatccacctgcctcggcctccccaactgctgggattacaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I e chlSab2.chr6 46761202 14 + 50890351 I a score=764138.000000 s hg38.chr19_GL949753v2_alt 56332 343 + 796479 tgagccactgtgccagg---------ccTTCATCACCAt-----tttttttttttcttttgagacagagttccactctttcgcccaggctggagtgaagtggcaaaatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgatctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T s panTro4.chr19 58990107 341 + 63644993 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt--cttttgagacagagttccactctttcgcccaggctggagtgaagtggcataatctcatctcattgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAG-CTCA--T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55865857 338 + 60714840 tgagccactgtgccagg---------ccTTCATCACCAt-----ttttttttt------tgagatagacttccactcttttgcccaggctggagtgaagtggcataatctcatctcactgcaacctccaccccccaggttcaagcggttctcctgcctcagcctcccaagtagctgggattacaggagcccttcaacacgcccagtta------------------------------------------atttttgta----ttttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagccAGTCATGAGCCTCA--T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626180 351 - 106955855 tgagccaccacgccaggACTTCATCACCTTCATCACCtt-----ttttttttttttttttgagatggagttccactctttcgcccaggctggagtgaagtggtgtaatctcagctcactgcaacctccatcccccaggttcaagtgattctcctgcctcagccgcccgagtagctgggattacaggagccctccaacatgcccagtta------------------------------------------atttttgta-----tttttagtagagacgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA--T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59913992 387 + 64156825 tgagccaccgcaccagg---------ccGTCATCACCCC----tttttttttttttttttgagattgagttccactcttttgcccaggctggagtgaagtggcataatctcagctcactgcaacctctcccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccaggtcatttttgta-tttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933446 384 + 59248254 tgagccaccgcaccagg---------ccTTCATCACCAC--------tttttttttttttgagatggagttccactcttttgcccaggctggagtgaagtggcataatctcagctcgctgcaacctctacccaccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagttaatttattatc---attattattattatactttaagccagttcatttttgtattttttttttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCA-TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47049897 349 + 51301725 tgagccaccgcgccagg---------ccttcatcaccactttttttttttttttttttttgagatggagttctactctttcgcccaggctggagtgaagtggcgtaagctcagctcactgcaacctccaccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcccagtta------------------------------------------atttttgta----ttttttagtagagacgaggtttcaccatgttggccagggtagtctcgaactcctgacctcaagtgatccacccacctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccagtcatgag-ttca-tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761216 395 + 50890351 TGAGCCACCGCACCAGG---------CCTTCATCACCACttcttttttttttttttttttgagatggggttccactctttcgcccaggctggagtgaagtggcataatctcagctccctgcatcctccacccaccagtttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggtgccctccaacatgcctagttaatttattatcattattattattattatactttaagccagttaatttttgta-tttttgtttagtagagacgaggtttcaccatgttggccagggtggtctcgaactcctgacctcacgtgatccacccgcctcagcctcccaaagtgttgcgattacaggcgtgagccactgtgcccagccAGTCATGAG-CTCATTT i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19541434 22356 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=144425.000000 s hg38.chr19_GL949753v2_alt 56675 50 + 796479 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa s panTro4.chr19 58990448 50 + 63644993 TTTTTAAGTTCAGaatatttcagtacatatctatctttatcaaataagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866195 50 + 60714840 TTTTTAAGTTCAGACTATTTCAATACATATCTATCTTTATAAAATCAGAA i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102626531 50 - 106955855 TTTTTAAGTTCAGaatatttcagtacgtatctatctttatcaaataagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914379 50 + 64156825 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933830 50 + 59248254 TTTTTAAGTTCAGaatatttcagtacatatatatctttatcaaataagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050246 50 + 51301725 tttttaagttcagaatatttcagtatatatatatctttatcaaataagaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761611 50 + 50890351 TTTTTAAGTTCAGaatatttcagtacatatatatcttcatcaaataagaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563790 50 - 122678785 tttttaatcccaaaatattttagtacatagctatctttatcagatgagaa i canFam3.chr1 I 22356 C 0 e calJac3.chr22 45321063 9366 + 49145316 I a score=246775.000000 s hg38.chr19_GL949753v2_alt 56725 143 + 796479 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa s panTro4.chr19 58990498 143 + 63644993 -ccattttaaaa---ataatataagcaccacagcactgtcacatcaagaaagttaagagtacctccttgataccagctaat-acccattcagtactcaaatttccctgattgtctcaaaaatgtcatttctatcaggtttttaaagaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626581 101 - 106955855 -ccattttaaaa---ataatataagcaccatagcactgtcacatcaggaaagttaaGAGTG-------------------------------------------cttgattgtctcaaaaatgtcatttctatcaggtttttaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914429 143 + 64156825 -ccattttaaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccttgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54933880 143 + 59248254 -ccatttttaaa---ataatataaacaccatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaat-acccattcagtattcaaatttccctgattgtctcaaaaatgtcatttctatcaggcttttaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050296 143 + 51301725 -ccattttaaaa---ataatataaacaccaTAGCACTGTCACATCAGGAAAGTTAAGAGTACTTCCTTGATACTAGCTAAT-ACCCATTCAGTATTCAAATTTCCCTGATTGTCTCAAAAATGTCATTTCtatcaggcttttaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761661 143 + 50890351 -ccattttaaaa---ataatataaacactatagcactgtcacatcaggaaaatgaagggtacttccttgataccagctaac-acccattcagtattcaaatttccctgattgtctcaaaaatgtcgtttctatcaggcttttaaaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19563840 133 - 122678785 tctgttttaaaaaatatataataaccaccaaagcaatatcatagtagta--------------tctttgctaccatcgcataatccagtcagtatccatatttcctcaataatatcaaatatatt-cttcggtcagtttttttaaaaa i canFam3.chr1 C 0 I 226 e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=98561.000000 s hg38.chr19_GL949753v2_alt 56868 55 + 796479 taaatcaggatccaataaaagtctacagattgcatttgataattatgtTAATTTA s panTro4.chr19 58990641 55 + 63644993 taaatcaggatccaataaaagtctgcagattgcatttgataattatgtTAATTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102626682 55 - 106955855 taaatcaggatccaattaaagtctgcagattgcatttaataattatgtTAATTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914572 55 + 64156825 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934023 55 + 59248254 taaatcagaatccaattaaagtctgcagattgaatttgataattatgttaattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050439 55 + 51301725 taaagcagaatccAATTAAAGTCTGCAGATTGAATTTGATAATTATGTTAATtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761804 55 + 50890351 taaatcagaatccaattaaagtctgcagattgaatttgataattatgtTAATTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e ponAbe2.chr19 55866245 25 + 60714840 I e calJac3.chr22 45321063 9366 + 49145316 I a score=10948.000000 s hg38.chr19_GL949753v2_alt 56923 4 + 796479 gcct s panTro4.chr19 58990696 4 + 63644993 gcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866270 4 + 60714840 gcct i ponAbe2.chr19 I 25 C 0 s nomLeu3.chr10 102626737 4 - 106955855 gcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914627 4 + 64156825 gcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934078 4 + 59248254 gcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050494 4 + 51301725 gcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761859 4 + 50890351 gcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19563973 226 - 122678785 I e calJac3.chr22 45321063 9366 + 49145316 I a score=830598.000000 s hg38.chr19_GL949753v2_alt 56927 292 + 796479 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccggggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa s panTro4.chr19 58990700 292 + 63644993 ggcgcagtggctcacacctgtaatcccaacactttgggagaccagggcaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaagctcatctttactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaat-agagtgagactcagtct--caaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866274 291 + 60714840 ggcacagtggctcacgcctgcaatcccaacactttgggagaccgaggtaggtagataacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacctcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaactgcttgaacctggcaggcaaa-gttgcagcgagccgagatcgcaccattgcactccagcctgggcaac-agagtgagactcagtct--caaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102626741 292 - 106955855 ggcacagtggctcattcctgtaatcccaacactttgggagaccgaggcaggtagatcacctgaggtcaggagttcgagaccagcctggccaaccatggtgaaacatcatctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcaaaggttgcagtgagctgagatcgcatcattgcactccagcctgggcaac-agagcgagactctgtat--caaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59914631 286 + 64156825 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactagaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagtctc-------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934082 293 + 59248254 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcagctaaggtcaggagttcaagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgagggtgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatggcaccattgcactccagcctaggcaac-agagagagactctgtctcaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050498 291 + 51301725 ggcgcagtggctcatgcctgtaatcccaacactttgggagaccaaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcatggtggtgcacacctgtaatcccagctagtcatgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgggctgagatcgcaccattgcaccccagcctgggcaac-agagagagactccgtct--caaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46761863 291 + 50890351 ggcacagtggctcatgcctgtaatcccaacactttgggagaccgaagcaggtagatcacctaaggtcaggagttcgagaccagcctggccaa-catggtgaaacctcgtctctactaaaaatacaaaaattagctgggcgtggtggtgcacacctgtaatcccagctagtcgtgaggctgaggcagaagaactgcttgaacctgggaggcgaaggttgcagtgagctgagatcgcaccattgcactccagcctaggcaac-agagagagactctgtct--caaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330429 289 + 49145316 ggtgcggtggctcatgcctgtaatcccagcactttgagaggtggacgcagatggatcacctgaggtcgggagttcgagaccagcctgacgaa-cat--caaacccccgtctctactaaaaaca-gaaaattagctggacgtggtggcgcgtgcctgtagtcccagctactctggaggctgaagcaggagaatctcttgaacccaggaggcggaggttgcggtgaaccgagatcgcgccattgcactccagcctgggcaacaagggcaaaactccgtct--caaaagcaaaaaaag i calJac3.chr22 I 9366 C 0 e canFam3.chr1 19563973 226 - 122678785 I a score=-507.000000 s hg38.chr19_GL949753v2_alt 57219 2 + 796479 -aa s panTro4.chr19 58990992 1 + 63644993 -a- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55866565 2 + 60714840 -aa i ponAbe2.chr19 C 0 I 742 s nomLeu3.chr10 102627033 2 - 106955855 -aa i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 59914917 2 + 64156825 -aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54934375 2 + 59248254 -aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47050789 2 + 51301725 -aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762154 2 + 50890351 -aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330718 2 + 49145316 -aa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564199 2 - 122678785 ga- i canFam3.chr1 I 226 C 0 a score=-1309.000000 s hg38.chr19_GL949753v2_alt 57221 1 + 796479 -a s nomLeu3.chr10 102627044 1 - 106955855 -A i nomLeu3.chr10 I 9 C 0 s rheMac3.chr19 59914919 1 + 64156825 -a i rheMac3.chr19 C 0 I 11 s macFas5.chr19 54934377 1 + 59248254 -a i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47050791 1 + 51301725 -a i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 46762156 1 + 50890351 -a i chlSab2.chr6 C 0 I 11 s calJac3.chr22 45330720 1 + 49145316 -a i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564201 1 - 122678785 t- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55866567 742 + 60714840 I e panTro4.chr19 58990993 0 + 63644993 C a score=104318.000000 s hg38.chr19_GL949753v2_alt 57222 44 + 796479 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT s panTro4.chr19 58990993 44 + 63644993 TGTTAATTTGAATCAGACaaaattttttatttttttgttaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867309 44 + 60714840 TGTTAATTTGAATCAGACAAAATTTTTTACTTTTTTGTTAAAAT i ponAbe2.chr19 I 742 C 0 s nomLeu3.chr10 102627045 44 - 106955855 TGTTAATTTGAATCAGACAAAATTTTTTATTTTTTTGTTAAAAT i nomLeu3.chr10 C 0 I 299 s rheMac3.chr19 59914931 44 + 64156825 TGTTAATTTAAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i rheMac3.chr19 I 11 C 0 s macFas5.chr19 54934389 44 + 59248254 tgttaatttaAATCAGACAAAATTTTTGATTCGTTTGTTAAAAT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47050803 44 + 51301725 tgttaatTTAAATCAGACAaaatttttgatttgtttgttaaaat i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 46762168 44 + 50890351 CGTTAATTTAAATCAGACAAAATTTTTGATTTGTTTGTTAAAAT i chlSab2.chr6 I 11 C 0 s calJac3.chr22 45330721 5 + 49145316 -----------------aaaga---------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564202 44 - 122678785 cgataGGCCAATTCAGACAAAATTCCCAATGTCTTTGTTAAAAT i canFam3.chr1 C 0 C 0 a score=425756.000000 s hg38.chr19_GL949753v2_alt 57266 140 + 796479 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCGAAGTCTCGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT s panTro4.chr19 58991037 140 + 63644993 aaGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCTTGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTCGTTTTTGTTTTCAGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867353 140 + 60714840 AAGAAATCAAGCAAGTT---AGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGTCTTGTTTTTGTTTTCGGA-TTTTTTGTCTTGATAGCACTTACTCTTCTTACTGTTTTGGAACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627388 141 - 106955855 aagaaaTCAAGCAAGTT---AGTTTTTATCCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGCCCCCAAGGCTTGTTTTTGTTTGCGGATTTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAC i nomLeu3.chr10 I 299 C 0 s rheMac3.chr19 59914975 139 + 64156825 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i rheMac3.chr19 C 0 I 322 s macFas5.chr19 54934433 139 + 59248254 AAGAAATCAAGCAAGTT---GGTTTTTAACCATG-TTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i macFas5.chr19 C 0 I 325 s papAnu2.chr19 47050847 139 + 51301725 aagaaatcaagCAAGTT---GGTTTTTAACCATG-tttttttCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGCTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTACTGTTTTGGAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762212 140 + 50890351 AAGAAATCAAGCAAGTT---GGTTTTTAACCATGTTTTTTTTCATCATGCATTTGGAAGAAGAGCAAAATGACCCCAAGGTTTGTTTTGGTTTTCGGA-TTTTTTGTCTTGATAGCACCTACTCTTCTTCCTGTTTTGGAACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330726 131 + 49145316 gaaaGATCAAGTC--TT---GGGTTTTAACTATG-TTTTCTCCATCACGCATTTGGGAGAAGAGCAAGATG-CCCCAAAGCTTGTTTTTGTTTTCGGA-TCTTCTGTCTCGGTAGT-----CTCTTCTTACTGCTTTGGAACAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564246 120 - 122678785 AAGAAGCCAAGCACATCATAGGTTTTT----ATGATTTTTTCCACCATTAATTTGGAAGAAAAGCAACATGCCCCTGAG--------------------ACTATTGTCTTGACAGAGCTTACTTATCTTTCTGTTCAGTAATAT i canFam3.chr1 C 0 C 0 a score=368490.000000 s hg38.chr19_GL949753v2_alt 57406 105 + 796479 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC s panTro4.chr19 58991177 105 + 63644993 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867493 105 + 60714840 AGAAACGTCAACAAGGCAACAAATTA-TAAGGAGTAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATAATTTTTAAAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627529 105 - 106955855 AGAAAAGTCAACGAGGCAACAATCTG-TAAGGAGTAAAACCAACTATAATTACAGGTATTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915436 105 + 64156825 agaaaAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i rheMac3.chr19 I 322 C 0 s macFas5.chr19 54934897 105 + 59248254 aGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i macFas5.chr19 I 325 C 0 s papAnu2.chr19 47050986 105 + 51301725 AGAAAAGCCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGGTGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762352 105 + 50890351 AGAAAAGTCAACAAGGCAACAAATTA-TAAGGAATAAAACCAACTATAATTACAGATGTTTCTTTGAAAGTTATTTTCACAAGATGTGGCAATGATTTTTAAAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330857 105 + 49145316 AGAAGAGTCAACGAGACGACCAGTTC-TGACGGAGTAAAGCAATTACAATCTCAGGTGCTTCTTTGAGAGTGATTTTCACAGGATGTGGCCATGATTTTTCAAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564366 106 - 122678785 AGAAAAATCAACAAGGCAACGAATTATTGGGGAGAGAAACCAATTATAATCACAGGAGTTTCTTTGAGGGTGATCTCCAAAAGATATGGCAATGATTTTTAAAGTC i canFam3.chr1 C 0 I 210 a score=601735.000000 s hg38.chr19_GL949753v2_alt 57511 175 + 796479 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAATGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT s panTro4.chr19 58991282 175 + 63644993 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACGTTTGTGAA-TATTCATTTAGTTCTCCATATTGTACCAGAAAACAAGACTGATATTCTTGTGAATCTTCTCAATTCAACTCTTTATCAAATCAGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867598 175 + 60714840 TTAGGACTCTTACAAGACCCTTTTGTTCAAATAATGGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTGTGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTTAATTCAACATTTTATCAAATCAGATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627634 175 - 106955855 TTGGGATTCTTATAAGATTCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATAAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915541 175 + 64156825 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935002 175 + 59248254 TTGGGACTCTTAGAAGACCCTTTTGTTCAAATAACATTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051091 175 + 51301725 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATgaa-tattcatttaattctccATATTGTACCAGAAAACAAGATTGATATCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762457 175 + 50890351 TTGGGACTCTTACAAGACCCTTTTGTTCAAATAACAGTTT--TGTGTATGAATTTATTTCAAC-----AGAGAACAATTTAGTAACAGTTATGAA-TATTCATTTAATTCTCCATATTGTACCAGAAAACAAGATTGATACCCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCAGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45330962 181 + 49145316 TTGGGACTCTTACAAGACCCTTTTGTTC-AATGACAGTTTTCTATGCATGAATTTATTTCAACAGAGAAGAGAACAATTTAGCAACCGTCATGAA-TATTCATGTAATTCTCCATATTGTACCAGAAAACAAGATTGATATTCTTGGGAATCTTCTCAATTCAACACTTTATCAAATCTGATT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19564682 172 - 122678785 TTGAGATTCTTATGAGACCCTTTTGTTTAAATAACACTTC--TCTGTGTAGATTTATTTCAACAGAGTAGAGAACAATATAGTAAA----ATGAATTATTTATGTGATTCTCCTAATTGCACC-GGAAACAACACTGATACTTTTGGCAAAGCTTTCACCTCAACACTTT----AATCAgatt i canFam3.chr1 I 210 I 888 a score=1545861.000000 s hg38.chr19_GL949753v2_alt 57686 539 + 796479 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATCTCTGTTGCTAACAAGGAATATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggtggcagtgagctgagatcgcaccattgtaccc---cagcctgggcaacaagagtgaaactccatctcaaaa---aataataa s panTro4.chr19 58991457 542 + 63644993 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGGAAAAGAGGACATCTCCTATATTTCTTCTTAACATGTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAATTCCATTCCACTTGGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACGAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggaaggcttgatcccaggagttcaacaccagcctgggcaacatggcctaatcccatctctacaaaaaatac-aaaaattagccaggcttggtggtatatacctgtaatcccagcttctcaggaggctgaggtgggagaatcacttgaacctgggagggggaggttgcagtgagctgagatcgcaccattgcaccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55867773 542 + 60714840 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTGGTAAAGTTCCATTCTGCTTAGAAATGAAGAAAAGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcaaggtggatcacacctgtaatcctaagattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacatcagcctggacaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaagtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggtggaagaatcgcttgaacctgggagggggaggttgcagtgagctgagattgcaccattgcactc---cagcctgggcaacaagagtgaaactccatctctaataataataataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102627809 544 - 106955855 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAACGAAGATGCCTATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAGGCCTAGTAAAGTTCCATTCCACTTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAAACAAAAC----------------------------------------------------------------------AAAGAATAAAGAATAGCTTAGggccaggcagggtggatcatacctgtaatcctaagatttcgggagg-tgaggtaggtggatggcttgatcccaggagttcaacaccagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccgggtttggtggtgcatacctttaatcccagcttctcaggaggctgaggtgggagaatcgcttgaacctgggagggggagattgcagtgagctgagatcacaccattgcgccc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59915716 540 + 64156825 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54935177 540 + 59248254 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTGAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaattgcttgaacctgggatgtgaaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataatagt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051266 542 + 51301725 CCTTAAATTAGTGTTGTGactcagaaaaaaatctttctccTTATGCAGTATCAGGAAAAAGAGGATATCTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGaagatgcatattttaaaactaggCTCTGGAATTTTATCAGTCAACAGGAAAAATCTGGTAAAGTTCTATTTCAcctagaaatgaagaaagga--------gaccctgattcaaaaaacaaa--aaaag----------------------------------------------------------------------aaagaataatgaatAGCTTAGGGCCAGGTaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatggcttgatcccaggagttcaacactagcctgggcaacatggcctaaccccatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcaccgttgcactc---cagcctgggcaacaagagtgaaactccatctcaaaaaataataata- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46762632 543 + 50890351 CCTTAAATTAGTGTTGTGACTCAG-AAAAAATCTTTCTCCTTATGCAGTATCAGGAAAAAGAGGATATTTCCTATATCTCTTCTTAACATCTCTTTTGCTAACAATGAAGATGCATATTTTAAAACTAGGCTCTGGAATTTTATCAGTCAACAGGAAATATCTGGTAAAGTTCTATTTCACCTAGAAATGAAGAAAGGA--------GACCCTGATTCAAAAAACAAA--AAAAG----------------------------------------------------------------------AAAGAATAACGAATAGCTTAGggccaggtaaagtggatcacacctgtaatcctaacattttgggagg-tgaggtaggtggatgacttgatcccaggagttcaacactagcctgggcaacatggcctaaccctatctctacaaaaaatac-aaaaattagccaggcatggtggtgcaaacctgtaatcccagctactcaggaggctgaggtgggagaatcgcttgaacctgggatgtggaggttgcagtgagccgagattgcactgttgcactcttgttgcctgggcaacaagagtgaaactccatctcaaaaaataataat-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45331143 615 + 49145316 CCTTAAATTAGGGTTGTGACTCAG-AAAAAATCTTCCTCCTTATGCAGTATCAGGAAAAAGAGGACATCTCCTGTATCTCTATTTAACATCTCTTTTGCTAACGGTGAAGATGTATATTTTAAAACTAGGCACTGGAATTTTATCAGTCAACAGAAACGCCCTGGTAAAGTTCCATTCCAGTTAGAAATGAAGGAAGGACTGAGCTGgactccgtctcaaaaaaaaaa--aaaaaaaaagaaagaaaaaagaaaTGAAGGAATAAATAGGAtttttttttttttttttttttGAGACCCTGATTCAAAAAATAAAGAATAGCT--Gggtcgggcgcggtggctcaggcctataatcccagcactttgggaggccgaggcgggtggatcacgaggt--caagagatcgagaccatcctggtcaacaaggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgccgtgagccgagatcgcgccattgcactc---cagtctgggtaacgagagtgaaactctgtctcaaaaaaaaaaaa--- i calJac3.chr22 C 0 I 716 e canFam3.chr1 19564854 888 - 122678785 I a score=117675.000000 s hg38.chr19_GL949753v2_alt 58225 57 + 796479 taa-------------aataa-ataaataaaTAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT s panTro4.chr19 58991999 57 + 63644993 taa-------------aataa-ataaaTAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868315 71 + 60714840 taataataataataataataataTAAATAAATAATCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628353 56 - 106955855 t---------------aataaaataaataaATAATCATTCACTTTGTTAAGTGTTTATCACACCTAACCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916256 50 + 64156825 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i rheMac3.chr19 C 0 I 239 s macFas5.chr19 54935717 50 + 59248254 --------------------a-ataaataaaTAGTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051808 54 + 51301725 ----------------aataa-ataaataaatagtcattCACTTTGTTAGGTGTTTATCACACCTAACCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763175 54 + 50890351 ----------------aataa-ataaataaataaTCATTCACTTTGTTAGGTGTTTATCACACCTAACCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 58282 1 + 796479 A s panTro4.chr19 58992056 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868386 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628409 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916545 1 + 64156825 a i rheMac3.chr19 I 239 C 0 s macFas5.chr19 54935767 1 + 59248254 A i macFas5.chr19 C 0 I 238 s papAnu2.chr19 47051862 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763229 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=15504.000000 s hg38.chr19_GL949753v2_alt 58283 8 + 796479 AGAATATG s panTro4.chr19 58992057 8 + 63644993 AGACTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868387 8 + 60714840 AGAATATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628410 8 - 106955855 AGAATATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916546 8 + 64156825 agaaTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936006 8 + 59248254 agaaTATC i macFas5.chr19 I 238 C 0 s papAnu2.chr19 47051863 8 + 51301725 AGAATATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46763230 8 + 50890351 AGAATATC i chlSab2.chr6 C 0 I 234 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=17599.000000 s hg38.chr19_GL949753v2_alt 58291 8 + 796479 TTACCAAA s panTro4.chr19 58992065 8 + 63644993 TTACCAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868395 8 + 60714840 TTACCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628418 8 - 106955855 CTACCAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916554 8 + 64156825 TTACCAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936014 8 + 59248254 TTACCAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47051871 8 + 51301725 Ttactaga i papAnu2.chr19 C 0 I 1727 s chlSab2.chr6 46763472 8 + 50890351 TTACTAAA i chlSab2.chr6 I 234 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=2181526.000000 s hg38.chr19_GL949753v2_alt 58299 1306 + 796479 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccaggagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactggtattctagcgtcatcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcactgtgccagccttggactgctcccttcagatttattctacataagggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttg-----tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggcacttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcggctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccgtctctactaaaaacaaaat-----------------------------------------taaa---aaaaattagccgg-------------------------------------------------------gtgtgtttgtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc s panTro4.chr19 58992073 1309 + 63644993 ATAAAAAGTCttatagatgaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattggcacccaggtaaaaaa-ct--attcttcagtgtcacttacaggtagatgtagccgtaagtcttcatctaggacgatgataaataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcgtcttgaaccatgaagatgagatgaggttcaagatggtggagggtgagccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcacatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaggttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagtaacaatcttgttttttttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggttcaatgtgatgttttcctgggcttcagtcatcagggtggctcaactgagctggaatctccaagatggtgcttgcaaatggctggctgttgatgctggatgttggttgaaagctcggctaggactgttgaatgatatacctgcacatagcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagaaaaggcggctgggcatggtggctcacatctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagttcaacatcagcctggccaacatggtaaaaccccatctctactaaaaataaaat-----------------------------------------taaa---gaaaattagcggg-------------------------------------------------------gcgtgttggtgcacacctgtaatcccagctactcaggaggccaaggcaggagaattgcttgaacctgggagg-cggaagttgcagtgagccgagatcacaccact--------gcactccagcctgggcaacagaatgagactctgtc-tcaa----ataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtttctcttcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55868403 1308 + 60714840 ATAAAAAGTCTTACAGATGAAATCATACTATATCTGAGGTTTACTTTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGTGAGGGGACTTATCTATAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgaattttagctgggcccattgccacccaggtaaaaaa-ctacattcttcaacgtcacttacaggtagatgtagccgtaagtcttcatctaggacaatgacatataagcataaatattgcagacagcttccaaaagattctttaatgaaatacgctttctttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttgaaccatgaagatgagatgacgttcaagatggcggagggtgaaccagaagtaacttaggtccataatgctttttggagtcattgtgccagccttggactgctcccttcagatttattctacataggggagaaatcaattggtattagttttaagtcatcattatttagttctctTTTGGgtttaagttatcaattactgtgttaacaaaccaccccaaaactgagtaacttagagcaacaatcttgtgttttttttttttttttttaatcattcctgatctggtgagatgactaggctcagttgagcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcaaggtggctcaactgagctggaatctccaagatggcgcttgcaaatggctggctgttgatgctggatgttgattgagagcttggctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggaggatagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggtggctgggcacggtggctcacgcctctaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatggtaaaaccctgtctctactaaaaataaaat-----------------------------------------ttaa---aaaaattagctga-------------------------------------------------------gcatgttggtgcgcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggagg-cagaagttgcagtgagccgagatcacaccact--------gcactccagcctgggtgacagaatgagactctgtc-tcaa------aaataaataaataaat-aaataaataaggcaaaagttgtttgtctctttaaagactaagcctgtaattgacacagtgtctcttcttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102628426 1289 - 106955855 ATAAAAAGGCttatagattaaatcatattatatctgaggtttactttaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTATCTGTAGTTATCTGCACATAATCTACATGATTATCTCAAAGCCATCCTTTTGCTGTTGagaattctgacttttagctgggcccattggcacccaggtaaaaaa-ctacattcttcaatgttacttacaggtagatgtaaccgtaagtcttcatctaggacaatgatatataag----aatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcatttaactgcctaaaatgtggatgtgatgactgatactctagcgtcatcttggaccatgaagatgag-----gttcaagatggtggggggtgagccagaagtaacttaggtccataatgctttttagagtcattgtaccagccctggactgctcccttcagatttattctacataggggagaaatcagttggtgttagttttaagtcatcattatttagttctctCTTGGAtttaggttatcaattactgtg-taacaaaccaccccaaaactgagtgacttagagtaacaatctt------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagctg-gcggttcttcagctcaatgtgatgtcttcctgggcttcagtcatcagggtggctcaactgagctggattctccaagatggcacttgcaaatggctggctattgatgctggatgttggttgagagttcggctaggactgttgaatgatgtatctgcacatggcctttccatttgattcaaacttcttggaggatagcttctgggtttcaagaggggatgtcataagaaagctttctaaaatagagaaggcagctgggcatggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggtggattacttgaggtcaggagttcaacattagcctggccaacatggtgaaaccctgtctctactaaaaata-----------------------------------------------------aaaattagccgg-------------------------------------------------------gtgtgttggtgcacacctgtaatcccagctactcaggaggccgaggcaggagaattgcttgaacctgggagg-cggaggttgcagtgagctgagatcacaccact--------gcactccagcctgggcgacagaatgagactctgtc-tcaaataaataaataaataaataaataaaataaagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59916562 1309 + 64156825 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGagaattctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaagattctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattacccattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc---------ttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcagctgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa------------------------------------------------taaaattagccagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn----------------------tcccagctactcaggaggctgaggcaggagaatcacttgaacctggggggacagaggctgcaatgtgctgagattaagccactgcactccagcactccagcctgagtgacagagcaaga---tgtcttgaa------aaaaaaaaaaaaaagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54936022 1313 + 59248254 ATAAAAAGTCTTGTAGATGAAAGCATATTATATCTGAGGTTTACTCTAAAATACTCCAGCAGAAAATTTAAAATAGACTTGGGGGAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaa---tgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgtggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccgct------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTATAgattaccaattactgtg-taacaaaccaccccaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcagttcttcggctcaatgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcagctaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggatgtcacaagagagctttctaaaatagagaaggcagccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaa-----aaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagccag-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccagt--------gcactccagcctgggcaacagaaagagactctgtc-tgga------aaaaaaaaaaaagagagagagagagaaggcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46763480 1320 + 50890351 ATAAAAAGTCttgtagatgaaatcatattatatctgaggtttactctaaaatactccagcagaaaatttaaaatagacttgggggAGGGGACTTACCTGTAGTTATCTGCACATAATCTACATGATTACCTCAAAGCCATCCTTTTGCTGTTGAGAATTctgatttttagctgggcccattgctacccaggtaaaaaagctactttcttcaatgtcacttacagatagatgtagctgtaagtcttcatctaggacaatgatatataagcataaatattgtagacagcttccaaaaggttctttaatgaagtacactttccttccttcacttaactgcctaaaatgcggatgtgatgactgatactctagcatgatcttggaccatgaagatgag-----gttcaagatggtggagggtgagccacaagtaacttaggtccataatgctttttagagtcattgtgccagccctggaccact------agatttattctacataggggagaaatcaattggtattggttttaagtcatcattatttAATTCTCTCTTGGGTACAgattatcaattactgtg-taacaaaccaccctaaaactgagtgacttagggtaacaatc--------tttttttttttttttaatcattcctgatctggtgagatgactgggctcagttgagcggttcttcggctcaacgtgatatcttcctgggcttcagtcatcagtggggctcaactgagctggaatctccaag-------------atggctggctgttgatgctggatgttggttgagagctcaactaggactgttgaatgatgtacctgcacatggcctctccatttgattcagacttcttggagggtagcatctgggtttcaagaggggaagtcacaagagagctttctaaaatagagaaggcggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaacatcagcctggccaacatgaggaaacatcatctctactaaaaaaaaaaaaaaaaaaaattagccaggcggaaccctgtctctactaaaattaaaaataaaaattagctgg-------------------------------------------------------gcatgttggtgcacacctgtaatcccagctactcgggaggccgaggcaggagtattgcttaaacctgggagg-cagaggttgcagtgagccgagataacaccatt--------gcactccagcctgggcaacagaaagagactctgtc-tgaa------aaaaaaaaaaaaaaaaaag-gagagagagcaaaagttgtttgtccctttaaagactaagcctggaactgacacagtgtctcttcttc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e papAnu2.chr19 47051879 1727 + 51301725 I a score=46193.000000 s hg38.chr19_GL949753v2_alt 59605 18 + 796479 tacagtcttaaggaaagg s panTro4.chr19 58993382 18 + 63644993 tacagtcttaaggaaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869711 18 + 60714840 tacagtctTAAGGCAAGG i ponAbe2.chr19 C 0 M 200 s nomLeu3.chr10 102629715 18 - 106955855 tacagtcttaaggaaagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917871 18 + 64156825 tacagtcttaaggaaagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54937335 18 + 59248254 tacagtcttaaggaaagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053606 18 + 51301725 TACAGTCTTAAGGAAAgg i papAnu2.chr19 I 1727 C 0 s chlSab2.chr6 46764800 18 + 50890351 tacagtcttaaggaaagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=258494.000000 s hg38.chr19_GL949753v2_alt 59623 135 + 796479 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc s panTro4.chr19 58993400 135 + 63644993 ccagattcaaggggagggaaaataaactctatctttctatagggacagtgacaaagaattggaggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629733 135 - 106955855 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgtcaTGTGTTATGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59917889 135 + 64156825 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i rheMac3.chr19 C 0 I 283 s macFas5.chr19 54937353 135 + 59248254 ccagattcaaggggagggaaaataaactctacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATGTATATTtactgagtgcctgagtc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47053624 135 + 51301725 ccagattcaaggggagggaaaATAAACTCTACCTCTCTATAGGGACAGTGACAAAGAATTGGGGGCCATCTTTAGTCTGCCATGTGTTACGGTCAATGgaaatagatatatgtatatttactgagtgcctgagTC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46764818 135 + 50890351 ccagattcaaggggagggaaaataaattatacctctctatagggacagtgacaaagaattgggggccatctttagtctgccaTGTGTTACGGTCAATGGAAATAGATATATATATATTtactgagtgcctgagtc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I a score=14659.000000 s hg38.chr19_GL949753v2_alt 59758 23 + 796479 ccaccgagagattttaattattt s panTro4.chr19 58993535 23 + 63644993 ccaccgagagattttaattattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102629868 23 - 106955855 ccacccagagattttcatttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937489 23 + 59248254 acccccagagattttaaattttt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47053760 20 + 51301725 ACCCCcagagatttaaaatt--- i papAnu2.chr19 I 1 I 1 s chlSab2.chr6 46764954 20 + 50890351 acccccagagattttaaatt--- i chlSab2.chr6 I 1 I 1 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55869729 200 + 60714840 M e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4658.000000 s hg38.chr19_GL949753v2_alt 59781 7 + 796479 ttttatt s panTro4.chr19 58993558 7 + 63644993 ttttatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869929 7 + 60714840 ttttatt i ponAbe2.chr19 M 200 C 0 s nomLeu3.chr10 102629891 7 - 106955855 atttatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937512 7 + 59248254 ttttttt i macFas5.chr19 C 0 I 278 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e chlSab2.chr6 46764974 1 + 50890351 I e papAnu2.chr19 47053780 1 + 51301725 I e rheMac3.chr19 59918024 283 + 64156825 I a score=-411.000000 s hg38.chr19_GL949753v2_alt 59788 4 + 796479 tttg s panTro4.chr19 58993565 4 + 63644993 tttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869936 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629898 3 - 106955855 tat- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54937797 3 + 59248254 ttt- i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47053781 3 + 51301725 ttt- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46764975 3 + 50890351 ttt- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I e rheMac3.chr19 59918024 283 + 64156825 I a score=4745433.000000 s hg38.chr19_GL949753v2_alt 59792 2010 + 796479 tttttttaagatggaattttgctcttgttgcccaggctgaagtgcaatggcatgatctcagctcactgcaacc-tctgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagatgggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcttttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATCGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAA---TTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaaTAGGTAAATAAgctgagtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaaTaaacttatggtgaaactgaatccctaatgtggccgtattgataggtcgggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctccattaactacaggaaataaattccttttctttataagttatctggcttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA s panTro4.chr19 58993569 2012 + 63644993 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccgggttcaagcaattctcctgcctcagcctcccaagtagctcggattacaggcaagtgccaccacacccagttaattttgtattttttagtagagataggatttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcgagattttaatttttacaatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggaaattctaatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcagaccctgaaacatcctgaaaactcctgtatctggagtttttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTTCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAAGTCTAGCAGAATCTCAGGCTTTAAATTTTTTTTTTTTCTGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgattgcaccactgcactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataaGCTCAgtgtggtggctcacacctgtaatctcagcactttaggaagccaaggtgggcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat---------aataaataaataaacttatggtgaaactgaatccctaatgtggccatatggataggtggggcatttaagaggtgatcgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttaagtagcacgctcagctcttttgccctgtgatgccctgtgccacctcggaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatgcagcccctccaccttggactttccaacctcca-taactacaggaaataaattccttttctttataagttatctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCAGACACCAATGCATAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTCCTAACGTCTTCGGACTCCTACAAGATTATTTTGTGCAAATTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55869940 2013 + 60714840 tttttttaagatggaattttgctcctgttgcccaggctgaagtgcaatggcatgatctcagctcaccgcaacc-tctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctcggattataagcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcttgacctcaggtgatctgcccacattggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagtcAagattttaatttttataatgggtataggatgaggcctgggtgtctcatcgtgtgttttaaatgttcctgggagattctaaggtgcagtcaactttgagaaccactCGGTTGgaacacacaacctccttcccatctcaggcccggaaacatcctgaaaactcctgtatctggagttgttcccccatttttgcttggctaactttgactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCAAGTTCTTTAAAAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCCTATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACAATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGTTAAAGTAAGAGGTCTAGCAGAGTCTCAGGCTTTAATTTTTTTTTTTTTCCGATCATAAATGTGGGAGAAAGATCATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatagggagaccctgtctctacaaa----ttaaaaattagccaggtgaggtggcacacgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatacagtgaaccgtgattgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaaTAagctgagtgtggtggctcacacctgtaatctcagcactttgggaggccaaggtgagcagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccccgtctctactaaaaatacaaaaattacctgggcatggtggcatgtgcttgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttataatgagctgagatcaagccactgctgtccagcctgggtgacatagcaagacATTGTCtaaaaaaataaataaacaaataaataaataaataaataaataaacttatggtgaaattgaatccctaatgtggccgtattgataggtggggcatttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggaatgagactggtggctttatcagaagaggaagaga----caagtagcacgctcagctcctttgctctgtgatgccctgtgccacctcagaaccctccagagagt--------------ccccaacagcaagaaggtcctcaccagatacagcccctccaccttggactttccaacctcca-taactacaggaaataagttccttttctttataagttttctggtttcaactgttctgttctaagcaacagaacacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGAAACAAAATATTAAGTAAGACCACCAAACGGCACCAAGATTTCTCCTTCAAAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102629901 1988 - 106955855 tgtttttaagatggagttttgctcttgttgcccaggctgaagtgcaatggcatgatcttagctcacggaaaccttccaccttccaggttcaagcgatcctcctgcctcagcctcccgagtagcttggattacaggcatgtgccaccacacccggttaattttgtattttttagtagagatggggtttctccatgttggtcaggcaggtcttgaactcttgacctcaggtgatacgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccaaccgagattttaatttttataatgggtataggatgaggcctgggtgtctcattctgtgttttaaatgttcctgggatattctcatgtgcagtcaagtttgagaaccactgGGTTGgaacacataacctccttcccatctcaggc----------cctgaaaactcctgtatctggagtttttcccccagttttgcttggctaactttgactcttccatcagaaaccagcttcagaatcctttctttagcaaagacttcgctgCAAGTTCTTTAACAGCACTTATCTCAGCTGTGACAAAATCATCAATGGTGTAATTGTGTCTTTTTAATGTCTTTCCCCC-ATTCTTCATAATAGTCAAAGTAAAGGATAGCTCTTCTCTCAGTCAGAACTATTAATAGATGCTGTAATGGAAATGAAACAAGACTCTCAGACTC-TTGATAAAGTAAGAAGTCTAGCAGAGTCTCAGGCTTTAAA--TTTTTTTTTTCCAATCATAAATGTGGGAGAAAGATAATTTAATCTGCTGCTAAGGTCTG-ATATTTGTTCCCTTGAAAACTCACGTTGAaccagcctgggcaacatagggagaccctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgaggatgcagtgaaccgtgactgcaccactgcactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgtggtggctcacacttgtaatctcagcactttgggaggccgaggtggacagatcacatgaggtcaggagtttgagactagctggccaacatgatgaaaccctgtctctactgaaaatacaaaaattacccgggcatggtggcatgtgcctgtaataccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctgtccagcctgggtgacatagcaagacattgtctcaaaaaatacataaataaat--------------------aaacttatggtgaaattgaatccctaatgtggctgtattgataggtggggcacttaagaggtgaatgtgtcatgaggactcttttattatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagaattaagtagcacgctcagctccttttccctgtgatgccctgtgccagctcggaaccctccagagagt--------------ccccaacagcaagaagttcctcaccagatgcagtccctccaccatggactttccaacctcca-taactacaggaaataaattccttttctttataagttttctggtttcaagtgttctgttctaagcaacagaatacagactaagacaCACACACCAATGCACAGCTTCTGATTTAACAGAATTGTTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAATCATAAGATTGTTACCAGGGCAACAAAATATTAAGTAAGATCACCAAACGGCACCAAGGTTTCTCCTTCAAAATAACGATTGCAATACTGGCAATAATTTCTAATGTCTTTGGACTCCTACAAGATTATTTTGTGCAAATTACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59918307 2001 + 64156825 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagcT--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAAACTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatctcagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaatataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactacgcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i rheMac3.chr19 I 283 C 0 s macFas5.chr19 54937800 2001 + 59248254 ttttttttagatggagttttgctcttgttgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccacctcccaggttcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcgcccggctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagct--gattttaatttttataatgggtacaggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcatgtgccgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcagtccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggctaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAATTTTTTTTTTTTCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctataaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagctgacaatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcagttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaa----------------------aacttatggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattcatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccttgtgccacctcaggaccctccagagagtcccgagtcttcttgccccaacagcaagaaggccctcgccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacaCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47053784 2002 + 51301725 ttttttttagatggagttttgctcttgttgcccaggttggagtgcaatggcataatctcagctcaccacaaca-tccacctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcgtgcgccaccgcacccagctaatgttgtattttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggct--gattttaatttttataatgggTACAGGATGAGGCCTAGGTGTCTCATTCTGTGTTTTAAATGTTCCTGGGAGATTCTTATGTGCCgtcaaatttgagaaccactcgGTTGGAACACATAACCTCCTTCCCATCTCAGGCCCTGAAACAA--TGCTATTTCCTGTATCTGGagtttttcccccatttttgCTTGGCTAACTTGGACTCTTCCCTCAGAAACCAGCTTCAGAATCCTTTCTTTAGCAAAGACTTCCCTGCATGTTCTTTAAGAGCACTTATCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACgtcttttccccctttcttcaTAATAGTCAAAGTAAAGGATGGCTCTTATCTCAGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTCATTCTTAAAGTAAGAAGTCTAGCAGAGTCTTgggctttaaa--ttttttttttccgatCATAAATGTGGGATAAAGATAATTTAACCTGCTGCTAAGGTTTAAATATTTGTTCCCTTGAAAACTCATgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctactcaggaggctgaagtgggaggatcacctgagcccagaaagcTGAcgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacacagtgagaccctgtctcaaaaaataaatagataaataagctgagtgcggtggctcacacctgtaatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaaccggccaacatgatggaaccccatctctactaaaactacaaaaattacctgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctgggtgacatagcaagacgttgtctcaaaaaatacataaataaat--------------------gaacttaTGGTGAAATtgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggacTCTTTTCTCATGAATGaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccCTGGGAGTGAGACTGGTGGCTTtatcagaagaggaagagagacttgAGTAGCACGCTCAGCTCCTTTGCCCTGTGATGCCCTGTGCCACCTCGGGACCCTCCAGAGAGTCCCGAGTCTTCTTGCCCcaacagcaagaaggccctcaccagatgcagcccctccagcttggacttcccaacctcca-caACTAcaggaaataaattccttttctttacaa-------CGTTTCAAGTATTCTGTTCTAAGCAACGGAATACGGACTAAGACACACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTCTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46764978 1993 + 50890351 -tttttttagatagagttttgctcttattgcccaggctggagtgcaatggcataatctcggctcaccacaaca-tccgcctcccaggctcaagcgattttcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccgcacctggctaatgttgtattttttagtagagatagggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtgatccgcctgtgttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcctggct--gattttaatttttataatgggtataggatgaggcctaggtgtctcattctgtgttttaaatgttcctgggagattctcacgtgctgtcaaatttgagaaccactCGGTTGgaacacataacctccttcccatctcaggccctgaaacaa--tgctatttcctgtatctggagtttttcccccatttttgcttggcaaacttggactcttccctcagaaaccagcttcagaatcctttctttagcaaagacttccctgCATGTTCTTTAACAGCACTTGTCTCAGCTACAACAAAATCATCAGTTGTGTAATTGTGTCTTTTTAACGTCTTTTCCCCCTTTCTTCATAATAGTCAAAGTGAAGAATGGCTCTT-----AGTCAGAACTATTAATAGATATTGTAATGGAAATGAAACAAGACCTTCAGACTC-TTCTTAAAGTAAGAAGTCTAGCAGAGTCTCGGGCTTTAAA--TTTTTTTTTCCCGATCATAAATGTGGGATAAAGATAATTTAACCTGCtgctaaggtttgaatatttgttcccttgaaaactcatgttgaaccagcctgggcaacatcaggaga-cctgtctctacaaataatttaaaaattagccaggtgaggtggcacatgcctgtgatcccagctacttaggaggctgaagtgggaggatcacctgaacccagaaagctgacgatgcagtgagccgtgactgcaccactgaactccagcctgtgcaacagagtgagaccctgtctcaaaaaataaaTAGATACATAAgctgagtgcggtggctcacgcctgtgatctcagcactttgggaggccaaggtgggcagatcacatgaggtcaggagtttgagaccaactggccaacatgatggaaccccgtctctactaaaaatacaaaaattacccgggcatggtggcacgtgcctgtaatacgaactactcaggaggctgaggcaggaaaatcacttgaacctgggaggtggaggttacagtgagctgagatcatgccactgctctccagcctggctgacatagcaagatgttgtctcaaaaaatacataaataaaT--------------------Gaacttacggtgaaattgaatccccaatgtggcagtattgagaggtggggactttaagaggtgattgggtcatgaggactcttttctcatgaatgaactaatccattcatggattaatggattagtgagttaatggattaatgggttaccctgggagtgagactggtggctttatcagaagaggaagagagacttgagtagcacgctcagctcctttgccctgtgatgccctgtgccacctcgggaccctcc--agagtcccgagtcttcttgccccaacagcaagaaggccctcaccagatgcagcccctccaccttggacttcccaacctcca-caactacaggaaataaattccttttctttacaa-------cgtttcaagtattctgttctaagcaacggaatacggactaagacGCACACACCAATGCACAGCTTCTCATTTAACAGAATCGGTTTTACAAGCATTTATTCTGCTTGGAAATTCAGATGTCAGTCATAAGATTGTTACTAGGGCAACAAAATATTAAGTAAGACCACCAAATGGCACCAAGGTTTGTCCTTCATAATAATGATTGCAATACTGGCAATAATTTCTAATGTCTTCGGACTCCTACAAGGTTATTTTGTGCAAATTACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45331758 716 + 49145316 I a score=426404.000000 s hg38.chr19_GL949753v2_alt 61802 162 + 796479 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACATAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCATTTTTT----TGTTTGTTT------ s panTro4.chr19 58995581 156 + 63644993 CTTCAAAGCACAGATTTATGGAACCACAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTTCATACTACGCAAGACTATAAAACGCATTTAGAGCCTTTTTAATATTCTCAGTTTATTAACTTATCAATCCACATTCCGGTTTTT----------TTT------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55871953 159 + 60714840 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCAATCCACATTCTGTTTTTT-----GTt--ttt------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102631889 164 - 106955855 CTTCAAAGGACAGATTTATGGAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACACATTTAGAGCCTTTTTAATATTCTCAGTTTATTACCTTATCCATCCACATTttgttgttgttgttgtt--gtt------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920308 150 + 64156825 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939801 150 + 59248254 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTGTTACCTTATCAAACCACAttctg----------------ttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055786 150 + 51301725 CTTCAAAGGACAGATTTATGCAACCAGAGAATGGAACACtggctgctgtaataaatatcCATAGATCTCCATACTACACAAGACTATAAAACAGATTTAGAGCCTTTTGAATATTCTCAGTTTATTACCTTATCAAACcacattctg----------------ttt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46766971 150 + 50890351 CTGCAAAGGACAGACTTATGCAACCAGAGAATGGAACACTGGCTGCTGTAATAAATATCCATAGATCTCCATACTACACAAGACTATAAAACAGATTTGGAGCCTTTTGAATATTCTCAGTTTATTGCCTTATCAAACCACAttctg----------------ttt------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332474 161 + 49145316 ccCCAAAGGACAGATTTATGGAACCAGAGAATGGAACGCTGGTCGCTGTAATAAATATCCATAGATCTCCATACTACAGAAGA-TATAAAACACATTTAGAGTCTTTTGAATATTCTCAGTTTATGACCTTATCAAACCACAttctgtttttg----------tttttgttt i calJac3.chr22 I 716 I 245 e canFam3.chr1 19564854 888 - 122678785 I a score=328804.000000 s hg38.chr19_GL949753v2_alt 61964 159 + 796479 GttttgttttgtttttttactttaagttctagggtacatgtgcataatgtacaggtttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t s panTro4.chr19 58995737 159 + 63644993 GttttgttttgtttttttactttaagttctagggtacatgtgcacaatgtacagatttgatacatgtgccatgttggtttgctccacccatcaagttatcatttacattaggtatttctcctaatgctatccctcccccagccccccaccccacTCTG-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872112 155 + 60714840 gt----ttttttttttttactttaagttctagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccacccATCTCtg-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632053 156 - 106955855 gttttgttt--tttttttactttaagttccagggtacatgtgcacaatgtgcaggtttgatacatgtgccatgttggtttgctgcacccatcaacttatcatttacattaggtatttctcctaatgctgtccct-ccccagccccccacccccctctg-t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920458 148 + 64156825 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggta-ttctcctaatgctatcccttccccagccccccgccccCCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54939951 149 + 59248254 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatcccttccccagccccccgccccCCACtg-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47055936 149 + 51301725 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctgcatccatcaacttatcatttacattaggtatttctcctaatgctatccctcccccagccccccgccccccactg-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767121 150 + 50890351 gt---------ttgttttactttaagttctagtgtacatgtgtacaacgtgcaggtttgatatatgtgccatgctggtttgctacatccatcaacttatcatttacattagttatttctcctaatgctatccctcccccagccccccgccccCCACtgt- i chlSab2.chr6 C 0 I 52 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=9314.000000 s hg38.chr19_GL949753v2_alt 62123 34 + 796479 tttt------------------tttttttttgttt---------ttttttttttaagacag s panTro4.chr19 58995896 24 + 63644993 tttt----------------------------tgt---------ttttttttttaagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872267 52 + 60714840 tttttgtttgtttgtttgtttgtttgttgttgttc---------ttttgtttttaagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632209 26 - 106955855 tttt------------------tt--------ttt---------ttttttttttAAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59920606 32 + 64156825 ------------------TGTGTGTGTGTGTGTGt---------ttttttttttaagac-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940100 31 + 59248254 ------------------tgtgtgtgtgtgtgtg----------ttttttttttaagac-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056085 41 + 51301725 ------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttttaagac-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767271 52 + 50890351 I a score=15777.000000 s hg38.chr19_GL949753v2_alt 62157 7 + 796479 ggtctca s panTro4.chr19 58995920 7 + 63644993 ggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872319 7 + 60714840 ggtctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632235 7 - 106955855 GGTCTTA i nomLeu3.chr10 C 0 I 340 s rheMac3.chr19 59920638 7 + 64156825 gatctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940131 7 + 59248254 gatctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056126 7 + 51301725 gatctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767323 7 + 50890351 gatctca i chlSab2.chr6 I 52 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=58123.000000 s hg38.chr19_GL949753v2_alt 62164 32 + 796479 ctgtgtcacccaggttggagtgcagtggtgtg s panTro4.chr19 58995927 32 + 63644993 ctgtgtcacccaggttggagtgcagtggtttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872326 32 + 60714840 ctgtgtcacccaggctggagtgcagtggtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59920645 32 + 64156825 ctctgtcacccaggctggagtgcagtggtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940138 32 + 59248254 ctctgtcacccaggctggagtgcagtggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056133 30 + 51301725 --ctgtcacccaggctggagtgcagtggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46767330 32 + 50890351 ctctgtcacccaggctggagtgcagtggtgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e nomLeu3.chr10 102632242 340 - 106955855 I a score=1340866.000000 s hg38.chr19_GL949753v2_alt 62196 589 + 796479 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtacaaggaattacagggttgtgccaccacgccgggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATAtctttttctcctctctcaatgccctctctctctctagctccctctcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccactacgcccggctac-----------ttttttttttttttgtatttttagtagagacggggtt s panTro4.chr19 58995959 600 + 63644993 atctcgactcactgcaacctctgcctctcgggttcaagtgattctcttgccccagc-cctcccaagtaccaggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagtgttttgccatgttggccagggctggtctcgaacttctgggcccaagtgatccgcctgcctcgacctcccaaagttctgggattacaggtgtgaaccaccatgccTCACCTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATGCCCTCTCTCTCTCTAGCTCCCTCTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATCAATTATAAAGAA------------ttttt--ttttttagat-ggagtctcactctgtcacccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaagcatgtgccactacgcccggctactttttttttttttttttttttttttgtatttttagtagagacggggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872358 594 + 60714840 atctccactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagc-ccccccacgtacgtggaattacagggttgtgccaccacgcctggctaatttttgtacttttagtagagacagcatttcgccatgttgggca-ggctggtctcgaacttctgggcccaagtgatccacctgcctcgacctccgaaagttctgggattataggtgtgaaccaccatgcctcgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCC-CTCTCAATCCCCTCTCTCTCTCTAGCTCCCTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTATAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttt--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggagtgtgccaccacgcccggctaa-----ttttttttttttttttttttgtatttttagtagagatggggtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102632582 592 - 106955855 atcttgactctctgcaacctctgcctcttgggttcaagtgattctcctgccccagctccccccaagtacctggaattagagggttgtgcaaccatgcctggctgatttttgtacttttagtagagacagcgttttgccatgttggcca-ggctggtctcgcacttctgggcccaagtgatcccaaacaatcgacctcccaaagttctgggattacaggtgtgaaccaccatgccttgccTAAACTACATTCTTGAATTAGTTTTATGGCACAGAATATCTTTTTCTCCTCTCTCAATCCCCTCTCTCTCCCTAGCTCCCCTTCCTCCCCTACAGCTGCAAAGAAGAAATCTTCTTAATCCATTTCTAAAACTTCTTTTGATTAATTATAAAGAA-----------tttttg--ttttttagat-ggagtcttgctctgtcgcccaggatggagtgcaatggcacaatctcagctcacctcaacctccgcctcctgggttcaagtggttttcccacctcagcctccccagtagctgggactacaggtgcgtgccactacgctcgactac---------ttttttttttttttttgtatttttagtagagacggggtt i nomLeu3.chr10 I 340 C 0 s rheMac3.chr19 59920677 597 + 64156825 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagatcaagtgatccacactcctcagcctcccaaatttctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATATCTTTTTCTCCTCTCTCAATCCTCTCTCTCTCTCTAGCGCCCTTTCTTCCCTTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA------ttttttttttt--ttttttagataagagtctccctctgtcacccaggctggagtgcaacggcagaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 54940170 602 + 59248254 atctcaactcactgcaacctctgtctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctgaaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccacccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggccTAAACTACATTCTTGAATTAGTTTTACGGCATGGAATAtctttttctcctctctcaatcctctctctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAAttttttttttttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacacctggcttt---------ttttgtttgtttctttgtattttcagtagcaatggggtt i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47056163 604 + 51301725 atctcaactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacagggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgccgggcctaaACTACATTCTTGAATTAGTTTtatggcatggaatatctttttctcctctctcaatcctctctctctctctagctcccTTTCCTCCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATtaattataaagaattttttttttttttttttattttttagat-agagtctccctctgtcacccaggctggagggcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46767362 593 + 50890351 atctcgactcactgcaacctctgcctcctgggttcaagtgattctcctgccccagc-cccctcaagtacctggaattacggggttgtgccaccatgcctggttaatttttgtatttttagtagagacaacatttcaccatgttggcca-ggctggtcgcaaacttctgagctcaagtgatccgcccacctcagcctcccaaaattctgggattacaggtgtgaaccaccatgcctggcTTAAACTACATTCTTGAATTAGTTTTACGGCACGGAATAtctttttctcctctctcaatcctctgtctctctctagctccctttcctcCCCTACAGCTGCAAAGAAGAGATCTTCTTAATCCATTTCTTAAACTTCTTTTGATTAATTATAAAGAA---------tttttttt--ttttttagat-ggagtctccctctgtcacccaggctggagtgcaacggcaaaatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacagatgtgtgccactacccctggcttt---------ttttgtttgtttctttgtattttcagtagcgatggggtt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=88561.000000 s hg38.chr19_GL949753v2_alt 62785 47 + 796479 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg s panTro4.chr19 58996559 47 + 63644993 tcaccatgttagccaggatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872952 47 + 60714840 tcaccatgttagccaggatggtctcgatctcctgacttcgtgatccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633174 47 - 106955855 tcaccatgttagccaggatggtctcgatctcctgaccttgtgatccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921276 47 + 64156825 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 54940774 47 + 59248254 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47056769 47 + 51301725 tcaccatgttagccaggatggtcttgatctcctgacctcatgatctg i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I a score=21831.000000 s hg38.chr19_GL949753v2_alt 62832 39 + 796479 cccacctcagccttccaaagtgctgggactacaggcgtg s panTro4.chr19 58996606 39 + 63644993 cccacctcagccttccaaagtgctgggactacaggcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55872999 39 + 60714840 cccacctcagcctcccaaagtgctgggattacaggcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633221 39 - 106955855 cccacctcagccttccaaagtgctgggactacaggcgtg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=10660.000000 s hg38.chr19_GL949753v2_alt 62871 60 + 796479 tgccactacacccggcTACTTTTGTGTGTGTGTGTGtgtgtgtttagtagagacggagtt s panTro4.chr19 58996645 59 + 63644993 tgccactacacccggcTAC-TTTGTGTGTGTGTGTGtgtgtttttagtagagacggagtt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633260 57 - 106955855 tgccactacgccgggcTACCTTT---TTTTTttttttgtatttttagtagagacggggtt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46767955 2 + 50890351 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=22801.000000 s hg38.chr19_GL949753v2_alt 62931 47 + 796479 tcaccatgttagccaagatggtctcgatctccggaccttgtgatcca s panTro4.chr19 58996704 47 + 63644993 tcaccgtgttagccaagatggtctcgatctcctgacctcatgatccg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633317 47 - 106955855 tcaccatgttagccaaggtggtctcgatctcctgacctcgtgatccg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46767957 47 + 50890351 tcaccatgttagccagaatggtcttgatctcctgacctcatgatctg i chlSab2.chr6 I 2 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I e papAnu2.chr19 47056816 0 + 51301725 C e macFas5.chr19 54940821 0 + 59248254 C e rheMac3.chr19 59921323 0 + 64156825 C a score=69566.000000 s hg38.chr19_GL949753v2_alt 62978 39 + 796479 cccgcctcagcctcccaaagtgctgggattacaggtgta s panTro4.chr19 58996751 39 + 63644993 cccacctcagcctcccaaagtgccgggattacaggtgta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102633364 39 - 106955855 cccgcctcagcctcccaaagtgatgggattacaggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921323 39 + 64156825 cctgcctcagcctcccaaagtgctggtattacaggcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940821 39 + 59248254 cctgcctcagcctcccaaagtgctggtattacaggcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47056816 39 + 51301725 cctgcctcagcctcccaaagtgctggtattacaggcgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768004 39 + 50890351 cctgcctcagcctcccaaagtgctggtattacaggcgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873038 0 + 60714840 C e calJac3.chr22 45332635 245 + 49145316 I a score=776036.000000 s hg38.chr19_GL949753v2_alt 63017 321 + 796479 agccactgtgcccggccAATTATAAATATTTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCGCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcttgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct s panTro4.chr19 58996790 321 + 63644993 agccactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAGGTTCAATTTTACTGGCAGAAAGCAAGAAATGGATGAATAGGATGTTTGCTGACAACCATGCCATtgaaacctcctttgcaaaaattacgagagtgagcaaacgatggcagcaaaggagatcggatctggccagcccctaccttgcctttggccctcaaactgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagaca-tttattttattttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873038 321 + 60714840 agacactgtgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACCGGTAGAAAGCAAGAAATGGATGAATAGGATGTTCTCTGACAACCATGCAATtgaaacctcctttgcaaaaattacgagagtgagcaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttggccctcaaacttcctgtagttattcctgggtttaggctaatttgacttgtctctttgggagaca-tttgttttattttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633403 319 - 106955855 agccactgcgcccggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAACAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATAGATGAATAGGATGTTCGCTGACAACCATACAATtgaaacctcctttgcaaaaattac--gagtgagcaaacaatggccgtgaaggagattggatctggccagcccctacgttgcctttggccctcaaagtgcctgtggttattcctgggtttaggctaatctgagttgtctctttgggagaca-tttattttattttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921362 322 + 64156825 agccactgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttGTCTCTTTGGGAGAtattttattttattttat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54940860 322 + 59248254 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCCTATAAAGTTCAATTTTACTGGTAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgcaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctggccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i macFas5.chr19 C 0 I 130 s papAnu2.chr19 47056855 322 + 51301725 agccaccgcacctggctaattataaataatttttaaggctaAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGGCctataaaattcaattttactGGTAGAAAGCAAGAAATGGACGAATAGGATGTTAGCTGACAACCATGCAATTGCAACCTCCTTTGCAAAAACTATGAGAGTAAGAAAACAATGGCAGTGAAGGAGATCGGATCTGGCCAGCCCCTACCTTGCCTTTGACCCTCAAGCTGCCTGTAGTTATTCCTGGGTTTAGGCTAATCTGACTTGTCTCTTtgggagatattttattttattttat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768043 322 + 50890351 agccaccgcacctggccAATTATAAATAATTTTTAAGGCTAAACTCTGGAATTTTGCTAGTTAGCCTTAAAAGCACAAAGCAGACCTATAAAGTTCAATTTTACTGATAGAAAGCAAGAAATGGATGAATAGGATGTTAGCTGACAACCATGCAATtgaaacctcctttgtaaaaactatgagagtgagaaaacaatggcagtgaaggagatcggatctagccagcccctaccttgcctttgaccctcaagctgcctgtagttattcctgggtttaggctaatctgacttgtctctttgggagatattttattttattttat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=6209.000000 s hg38.chr19_GL949753v2_alt 63338 3 + 796479 ttt s panTro4.chr19 58997111 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873359 3 + 60714840 tgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633722 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921684 3 + 64156825 ttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941312 3 + 59248254 ttt i macFas5.chr19 I 130 C 0 s papAnu2.chr19 47057177 3 + 51301725 ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768365 3 + 50890351 ttt i chlSab2.chr6 C 0 I 249 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=5096.000000 s hg38.chr19_GL949753v2_alt 63341 2 + 796479 at s panTro4.chr19 58997114 2 + 63644993 at i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873362 2 + 60714840 at i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633725 2 - 106955855 at i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59921687 2 + 64156825 at i rheMac3.chr19 C 0 I 305 s macFas5.chr19 54941315 2 + 59248254 at i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47057180 2 + 51301725 at i papAnu2.chr19 C 0 I 246 s chlSab2.chr6 46768617 2 + 50890351 at i chlSab2.chr6 I 249 I 1 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=-310.000000 s hg38.chr19_GL949753v2_alt 63343 1 + 796479 a s panTro4.chr19 58997116 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873364 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633727 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e chlSab2.chr6 46768619 1 + 50890351 I e papAnu2.chr19 47057182 246 + 51301725 I e macFas5.chr19 54941317 1 + 59248254 I e rheMac3.chr19 59921689 305 + 64156825 I a score=343570.000000 s hg38.chr19_GL949753v2_alt 63344 192 + 796479 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagggattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccatgcccgattaatttttgtatttttagtagagacgaggtttcaccatgt s panTro4.chr19 58997117 192 + 63644993 tttccttgagacggagtctcgctctgtagcccgggctggagtgcagtggtgagatctcggttcaccgcaacctctgcatcctagttcaagcgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873365 192 + 60714840 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtaactggaattacaggtgcctgccaccaagcccaactaatttttgtatttttagtagagatgaggtttcaccatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102633728 192 - 106955855 tttccttgagacggagtctcactctgtagcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcttcctagttcaagtgattctcctgcctcagcctccagagtagctggaattacaggtgcctgccaccaagcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54941318 192 + 59248254 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcagttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47057428 192 + 51301725 tttccttgagatggagcctcactctgtagcccaggctggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcctccagagtagctggaactacaggtgcctgccaccatgcccgactaatttttgtatttttagtagagacgaggtttcaccatgt i papAnu2.chr19 I 246 C 0 s chlSab2.chr6 46768620 170 + 50890351 tttccttgagatggagcctcactctgtagcccagactggagtgcagtggtgcaatctcggttcaccgcaacctctgcctcctagttcaagcgattctcctgcctcagcc----------------------gtgcctgccaccatgcccgactaatttttgtatttttagtagagacaaggtttcaccatgt i chlSab2.chr6 I 1 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I e rheMac3.chr19 59921689 305 + 64156825 I a score=287599.000000 s hg38.chr19_GL949753v2_alt 63536 122 + 796479 tggccaggctggtctgaaactcctgacctcaagagatccgcccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagaaaggaaaagagaggagaggagagg----- s panTro4.chr19 58997309 122 + 63644993 tggccaggctggtctgaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagagaggaaaagagaggagaggagagg----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55873557 123 + 60714840 tggccaggctggtctgaaactcctaatctcaagtgatccgcccgccttggcctcccaaagtgctgggattagaggAAAGaaggaaaggaaaagaaaggaaaggaaaggaaaggaaaggaaagg----- i ponAbe2.chr19 C 0 I 341 s nomLeu3.chr10 102633920 122 - 106955855 tggccaggctggtctgaaactcctgacctcaagtgatccgctcaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aaggaaaagtaaggaaaagagaggagaggagagg----- i nomLeu3.chr10 C 0 I 5 s rheMac3.chr19 59921994 127 + 64156825 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAGaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i rheMac3.chr19 I 305 C 0 s macFas5.chr19 54941510 127 + 59248254 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggaaagaaggaaagg-aaggtaagaaaaggaaaagaaaggaaaggaaagggaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057620 127 + 51301725 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggaaagaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768790 127 + 50890351 tggccagactggtctgaaactcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattagaggAAAgaaggaaagg-aagggaagaaaaggaaaagaaaggaaaggaaagggaggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=127964.000000 s hg38.chr19_GL949753v2_alt 63658 172 + 796479 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaag--------------------------------------------------------------------------------------------------agagaaagaaagaagaaaagagagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------a---aaaat---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggagggaggcaaggaaggaaggaagca s panTro4.chr19 58997431 180 + 63644993 ggaggggagggg------------aagGgagagaaaggaaaggg--------------------------aagagagaaagaaagaagaaaag--------------------------------------------------------------------------------------------------agagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagt---------------------------------------aaagaaagaagaa---aaaagaaaa-gagaaaaggaagg-----------------------agggagggactgaggcaaggaaggaaggaagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102634047 246 - 106955855 ggaggggagggg------------aagggagagaaaggaaagggtgagaaagggaagagagaaagaagaaaagagagaaagaaagaaggaaagggtgagaaagggaagagataaagagagaaagaagaa-------------------------------------------------------------aagagaaagaaagaaggaaagaaagaaagaaggaaagaaagaaagaaag-------------------------------------------------------------------------------------agagaaaaa---------------------------------------gaggaaggaaggaaggaagagaaaa-gaaaaaagaaagg-----------------------agggagggagggagggaaggaaggaaagaagga i nomLeu3.chr10 I 5 I 8 s rheMac3.chr19 59922121 207 + 64156825 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGT----------------------------------------------------------------------------------------------GAGAGAAAGAAGAAAAGAGAG------------------------AGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggaa----------------------------------------------------------------------------ggaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941637 188 + 59248254 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagt----------------------------------------------------------------------------------------------gagagaaagaagaaaagagagaaagaaagagaaagaaagaaagaaagag-------------------------------------------------------------------------------------aaagaaag------agaaagagag------------------------aaagagagagaga---gaaagagag-gaaggaaggaaag-----------------------gaaaggaaaggaaaggaaaggaggaaggaagga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47057747 320 + 51301725 ggaggggagggggaggggaggggaaggggagagaaaggaaagga--------------------------aagggagaga-----aagggaatagtgagagaaagaaga---aaagagagaaagaatgagagaaagaagaaaaagagagaaagaaagagagaaagaaggaaagaaagaaagaaagagagagagagagagaaagaaagaaagaaagaaagagaaagaaaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaag------------------------aaagaaagaaaaa---gaaagaaaa-gaaagaaagaaagagaaagagaaagagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46768917 272 + 50890351 ggaggggagggg------------aagggagagaaaggaaagga--------------------------aagggagaga-----aagggaaTAGTGAGagaaagaaga---aaagagagaaagaaaaa-------------------------------------------------------------gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------------------------------------------------------------------------------------aaagaaagaaagaaagaaagaaagaaaggaagaaagaaagaaaaaagaaaagagagagaga---gaaagaaagagaaagaaagaaagagagagagaaaaagaggaaggaaggaaggaaaggaaaggaaaggaggaaggaagga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e ponAbe2.chr19 55873680 341 + 60714840 I e calJac3.chr22 45332635 245 + 49145316 I a score=75688.000000 s hg38.chr19_GL949753v2_alt 63830 35 + 796479 agaaagagagaaagagagaaaAGAGGCTCCTTATA s panTro4.chr19 58997611 35 + 63644993 agaaagagagaaagagagaaaAGAGGCTCCTTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874021 35 + 60714840 agaaagaaagaaagggaGAAAAGAGACTCCTTATA i ponAbe2.chr19 I 341 C 0 s nomLeu3.chr10 102634301 35 - 106955855 agaaagaaagaaagggagaaaAcaggctacttata i nomLeu3.chr10 I 8 C 0 s rheMac3.chr19 59922328 35 + 64156825 aggagggaaggaagggagaaaagaGGTTCCTTATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941825 35 + 59248254 aggagggaaggaagggagaaaagaGGTTCCTTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058067 35 + 51301725 aggagggaaggaagggagaaaagaggttccttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769189 35 + 50890351 aggagggaaggaagggagaaAAGAGGTTCCTTATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19564854 888 - 122678785 I e calJac3.chr22 45332635 245 + 49145316 I a score=402849.000000 s hg38.chr19_GL949753v2_alt 63865 127 + 796479 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagtacatatttcttactatatcacggtatcacggg s panTro4.chr19 58997646 127 + 63644993 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaagcacatatttcttactatatcacgatatcacggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874056 127 + 60714840 AAAAACAAAAGACACTCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccaaagctgaagaccaaatacgtatttcttactatatcacGATATCACggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634336 127 - 106955855 aataacaaaagacacccttctcaccaaggatttttggaaattccagagtgacggggtgagaagggtgtctttggaaccaaagctgaagaccaaatacatatttcttactatatcacgatatcacggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922363 127 + 64156825 AATAacaaaagacacccttctcaccaagggtttttggaaattccagagtgatggggtgagaagggtgtctttggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941860 127 + 59248254 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagaccaaatacatatttcttactatatcacgatatcacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058102 127 + 51301725 aataacaaaagacacCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTGGAACCAGAGCTGaagaccaaatacatatttcttactATATCACGATATCACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769224 127 + 50890351 AATAACAAAAGACACCCTTCTCACCAAGGGTTTTTGGAAATTCCAGAGTGATGGGGTGAGAAGGGTGTCTTTggaaccagagctgaagatcaaatacatatttcttactatatcacgatatcacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45332880 126 + 49145316 aataACAAAAGACACCCTTCTCA-CGAGGATTTTTGGAATTTCCAGAGTGACGGGGTGAGAAGGGGGTCTTTggaaccagagctgaagaccaaacacgtatttctcactatatcacaatatcgcagg i calJac3.chr22 I 245 C 0 e canFam3.chr1 19564854 888 - 122678785 I a score=763349.000000 s hg38.chr19_GL949753v2_alt 63992 238 + 796479 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT s panTro4.chr19 58997773 238 + 63644993 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgcgtgga----taag-----------------taccaggtttccagagt-----------------------gccagggcggggctg-cc----cctTGCGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874183 255 + 60714840 aggtaaaacggaggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccgagactcagcttagctgtggttcaagcctctgattgggtggA----TAAAGCACGCAATCCTTTCCTTTCCAGGTTTCCAGAGT-----------------------GCCAGGGCAGGGCTG-CC----CCTTGGGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATGGGTCCTG-------------TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634463 238 - 106955855 aggtaaaacgg-ggtggccttgaagcagctcctccccagcccccaatcctcttgtgtgcctggaggatcagaagaggtcctgccgagactcagcttagctgtggttcaatcctctgattgcacaga----taag-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACATGATCTTCAGATGGGTCCTG-------------TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922490 252 + 64156825 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54941987 252 + 59248254 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagcttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47058229 252 + 51301725 AGGCAAAAGGGAGGTGCCCTTGAAGcagctcctccccagcccccaatCCTCTTGTGTGCCCGGATGATCAGAAGAGGTCCCGCCAAGACTCAGCTTAGCTGTGGTTCAAGCCTCTGATTGCGTGGA----TAAA-----------------TACCAGGTTTCCAGAGT-----------------------GCCAGGGCAGAGCTGCCC----CCTTGAGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769351 252 + 50890351 aggtaaaagggaggtgcccttgaagcagctcctccccagcccccaatcctcttgtgtgcccggaggatcagaagaggtcccgccaagactcagtttagctgtggttcaagcctctgattgcgtgga----taaa-----------------taccaggtttccagagt-----------------------gccagggcagggctgccc----ccttgcGGTGGCATTAACTTTCCATGGCTATTT-AAAATCAGCAGAGGACACACGATCTTCAGATAGGTCCTGTTTCAACTGAACATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333006 249 + 49145316 aggtgaaagggagatggcctcgaagcagctcctccacaccccctaatcct---------------gatcggaaga-gtcctgccaagactcagcctagctgtggttcaagcctctgattgcggggatggttaag-----------------taccagatttccagagTCTTTTGAATATTCTCAGTTTATGACCAGCGCAGCGCTGCCC----CCTTGTGGTGGCACTAACTTTGCACAGCTATTT-AAAATAAGCAGTGGACACACCATCTTCAGA-------------GACTGAACAT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19565742 244 - 122678785 aggtgagtgggagatgggctcacagcagctcctcacaaacctcccatccttgcgtgttccagtgggatcataaggcattgtgcccggactcagattagctgcagttcaagcctctgactgtgtagc----catg-----------------tgaagggtttccaggat-----------------------gccatagcagagccCCCCACCACCTTCCCGTGGCATGAACTTTCCATAGTTCTTTAAAAATAAGCAatgggtacaagatctccagaaggatgttg-------------tt i canFam3.chr1 I 888 I 1177 a score=136054.000000 s hg38.chr19_GL949753v2_alt 64230 43 + 796479 TTACTTCCATATTTTCTCCTAGAGAGAAGAAAAATCATTAAAC s panTro4.chr19 58998011 43 + 63644993 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874438 43 + 60714840 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634701 43 - 106955855 TTACTTCCATATTTTCCCCTAGAGAGAAGAAAAATCATTAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922742 43 + 64156825 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54942239 43 + 59248254 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47058481 43 + 51301725 TTACTTCCATATTTTCCCctggagagaagaaaaatcattaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769603 43 + 50890351 TTACTTCCATATTTTCCCCTGGAGAGAAGAAAAATCATTAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333255 40 + 49145316 ---CCTCCATATTTTCCCCAAGAGAGAAGAAAAATCATTAAAC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I a score=574939.000000 s hg38.chr19_GL949753v2_alt 64273 344 + 796479 ttttttttgtttgttttttgtttttttgttttattcgttgttttt-tttttttttttttttttttgagacggagtctcgctc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggcctactgtat-tttttttttttttttt- s panTro4.chr19 58998054 337 + 63644993 TTTTTTTTGT---TTTTTTGTTTTATTGGT------Gttatttttatttatttatttatttttttgagacggagtctcactc-tgtggcccaggctggagtgcaatggcgtg-tatcagctcactgcaacctccacctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacag-------------------------ctttgtatttttagtagagtcggggtttcactatattggccagggtggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtatatatatatatatttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874481 326 + 60714840 TTTTTTCTGTTTGttttttgtttttttgt-----------------tttattggtttttttttttgagacggagtctcgctc-tgtcacccaggctggaatgcaatggcatg-tatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattactg-------------------------ctttgtatttttagtagagtcggggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctccgaaactgctgggattacaagtatgaaccaccgcacctggccTACTGt---tttttttttttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102634744 342 - 106955855 tttttttcgtttgttttttgtttttttgttttattgttttttttgtttttgtttttgttttttttgagacagagtctcgctc-tgtcgcccaggctggagggcaatggcgtgatatcggctcactgcaacctctgcctccagggttcaagtgattctcctgcctcagcctcctgagtagctgggattacag-------------------------ctttctatttttagtagagtcgggatttcactatattggcctggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgaaccaccgcacctggccTACTGtat-----tttttgtttttt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59922785 319 + 64156825 ----------------------------------------------Gtttctttttgggtttttttagacagagtctcactc-tgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctccggccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcacatttttgcatttttagtagagtcagggattcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttagcctcccaaagtgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058524 319 + 51301725 ----------------------------------------------gtttctttttgggtttttttagacagagtctcactc-tgtcgcccagcctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcactatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattataggcatgagccaccgggcctggccta-------tttttgtttttgtttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769646 319 + 50890351 ----------------------------------------------Gtttctttttgggttttttaagacagagtctcactc-tgtcgcccaggctggagagcaatggtgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactactatgcccagcaaatttttgtatttttagtagagtcggggtttcattatattggccaggctggtctccaactcctgagctcaggtgatctgcctgccttggcctcccaaattgctgggattataggcatgagccaccgggcctggccTA-------TTTTTGTTTTTGTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45333295 316 + 49145316 ------------------------------------------------------tttttttttttgagatggaggtttgctcttgtaacccaggctggagcccagagctgcgatctcggctcactgcaacgtccgcctcccaggttcaagtgattctcctgcctcagtctcccgagtagctgggattacaggcatgcaccaccacaccaagcgaattttttcattcttagtagagatgggatttcactatatcggccaggctggtctcaaactcctgacctt--gtgatccacccaccttggcatcccaaagtgctgagatcacaggcgtgagccacagtgcccggcATCACACA--TTTTTATTCGTTTTTCT i calJac3.chr22 C 0 I 1953 e canFam3.chr1 19565986 1177 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=251456.000000 s hg38.chr19_GL949753v2_alt 64617 135 + 796479 GAATAGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagtttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct s panTro4.chr19 58998391 135 + 63644993 aaataGAGAAGGGAgtctcaaactcttggcctcaagccatcctcctgcctcagcttcccaaaatgctgggattat---gagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874807 137 + 60714840 aaataaaGAAGGGAgtctcaaactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102635086 137 - 106955855 taatagagaagggagtctcagactcctggcctcaagccatcctcctgcctcagcctcccaaaatgctgggattat-aagagcaagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i nomLeu3.chr10 C 0 M 1542 s rheMac3.chr19 59923104 138 + 64156825 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctccctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCACCCTCATTTTTAGAAGGGCACAGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47058843 138 + 51301725 taatagagaagggagtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcacctatcccaccccctcccaccctcattTTTAGAAGGGCACAGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46769965 138 + 50890351 TAATAGAGAAGGGAgtctcaaactcctggcctcaagctatcctcctgcctcagcctcccaaagtgctgggattgttaagagtgagccactgcaccTATCCCACCCCCTCCCaccctcatttttagaagggcacaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=20340.000000 s hg38.chr19_GL949753v2_alt 64752 17 + 796479 agagaccatatttccat s panTro4.chr19 58998526 17 + 63644993 agagaccatatttccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874944 17 + 60714840 agagaccatatttcctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59923242 17 + 64156825 AGAGACCATATTTCCAT i rheMac3.chr19 C 0 I 2242 s papAnu2.chr19 47058981 16 + 51301725 AGAGACCATATTTCCA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46770103 17 + 50890351 agagaccatatttccat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=32868.000000 s hg38.chr19_GL949753v2_alt 64769 48 + 796479 cagtcacttttgcggctagacctgtccatgagactaagttctagccaa s panTro4.chr19 58998543 48 + 63644993 cagtcacttttgcggctagacctggccatgagactaagttctagccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55874961 48 + 60714840 cagccacttttacggctagacctggccatgagactaagttctagccaa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47058997 39 + 51301725 ---------TAGTGGCTAGGCCTGGCCATGAGACTAAGTTccaccaca i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46770120 48 + 50890351 cagtcacttttgtggctagacctggccatgagactaagttcCACCACA i chlSab2.chr6 C 0 I 51 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 64817 1 + 796479 t s panTro4.chr19 58998591 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875009 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059037 1 + 51301725 t i papAnu2.chr19 I 1 I 25 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=9221.000000 s hg38.chr19_GL949753v2_alt 64818 36 + 796479 gggatgcgataggaagatacatgctcaaattctagg s panTro4.chr19 58998592 36 + 63644993 gggatgcggtaggaagatatatgctcaaattctagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875010 36 + 60714840 gggatgcaataagaagatatatgctcaaattctagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e papAnu2.chr19 47059038 25 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=5469.000000 s hg38.chr19_GL949753v2_alt 64854 21 + 796479 tcctgctcttaaaAAATAATT- s panTro4.chr19 58998628 21 + 63644993 tcctgctcttaaaaaATAATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875046 21 + 60714840 tcctgctctaaaaaAATAATT- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059063 22 + 51301725 TCCTAATCTTTATATAAGATCT i papAnu2.chr19 I 25 I 2 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770168 51 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=201974.000000 s hg38.chr19_GL949753v2_alt 64875 267 + 796479 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaatttagccgggtgtggtggtggacgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggc s panTro4.chr19 58998649 266 + 63644993 GTGTGggccgggcgcagtggctcacgcctgtaatcccagtactttgggaggctgaggcaggcggatcac--gaggtcaggaaatcgagaccatcctggataacacggtgaaaccccgtctcgactaaaaatacaaaaaaa-ttagccaggcgtggtggtggacgcctatagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcattgagtcgagatcacgccactgcactccagcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875067 267 + 60714840 GTGTGggccaggcgcggtggttcacacctgtaatcccagtaccttggaaggctgaggggggcggatcac--gaggtcaggagatcgagaccatcctggataacacggtgaaaccccgtctctactgaaaatacaaaaaaaattagccgggcgtggtggtggacgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagtcgagatcacgccactgcactccagcctgggt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059087 265 + 51301725 gttagggccgggcacagtggcttacgcctgtaatcctagcactttgggaggccgaggcaggtggatcacctgaggtcgggagttcgagaccagcctgatcaacatggagaaaccccgtctctactacaaatacgaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccgggaggcagaggttgtggtgagccgagatcgtgccatggcactccagcctgggc i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46770219 265 + 50890351 GTGAGggccgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcaagaccagcctgatcaacatggagaaaccctgtctgtactacaaatacaaaa----ttagctgggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaattgcttgaacccgggaggcagaggttgcggtgagccgagatcgtgccattgcactccagcctgggc i chlSab2.chr6 I 51 I 1179 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=11464.000000 s hg38.chr19_GL949753v2_alt 65142 36 + 796479 -gacagagcaagactccaactcggaaaaaaaaaaaaa s panTro4.chr19 58998915 35 + 63644993 -gacagagcaagactccaactcgg-aaaaaaaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875334 34 + 60714840 -gacagagcgagactccatctcag--aaaaaaaataa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47059352 37 + 51301725 aatgagagcaaaactctgtctcaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 I 1323 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=273.000000 s hg38.chr19_GL949753v2_alt 65178 1 + 796479 t s panTro4.chr19 58998950 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875368 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19565986 1177 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=58931.000000 s hg38.chr19_GL949753v2_alt 65179 177 + 796479 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCTCTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT s panTro4.chr19 58998951 173 + 63644993 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAAAAATTAAAACTACATGTTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGT----TGAGAGAGAGGTACATTTATATCTAGTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875369 177 + 60714840 aataaTTGTGTGAGCCCTTTTCTCTCTGTCCTCTCCACTTTCTT--------GGGGCTCAGAACCAGAAATTAAAGCTACATATTGATAAAAGCAAAACCATCCCACCTTAACAAGTAAATCGT-TGAGATTG-CCCAGTGATTTACTGTTAAGTGAGAGAGAGGTACATTTATATCTAGTTTTTTT i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567163 172 - 122678785 aatgattgttt----ctctctgtctctgtctttctctcttcctcctttcatgctgcctCAGAACCACACCGGAAAACTGCATGTTGACAAGAGCAAAGCTGTT-----------GGTAAACAGTCCCAGACTGTTTCAACTATATACTGTGAAGTGAAAGAGACATAAAATCATAATAGGTTTTTTT i canFam3.chr1 I 1177 I 8 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=86474.000000 s hg38.chr19_GL949753v2_alt 65356 335 + 796479 CCGGTGGTGAAGGAGATtctttttttctctctctctctcttttttatgagatggagcttggctcttgttgcccaggctggagtgcaatggcacgacctcggctcagtgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacagggtttcaccatgttaatcaggctgctctcgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA s panTro4.chr19 58999124 334 + 63644993 CCGGTGGTGAAGGAGAttc-ttttttctctctctctctcttttttattagatggaggttggctcttgttgcccaggctggagtgcaatggcacgaccttggctcactgaaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggggtttcaccatgttaatcaggctgctctcgaactcctaacctcaggtgatccacctgccttggcctcccaaagtgctaggattacaggtgtgcgccactgcacctggccGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875546 327 + 60714840 CCGGTGGTAAGGGAGAttc-tttttt-------tctctcttctttatgagatggagcttggctcttgttgcccaggctggagtgcaatggtatgacctccactcactgaaacctccgcctcccaggttcaagtgattctcctgcctcagccccctgagtagctgggattacaggcatgcaccaccacaccaggctaattttttgtatttagtagagacggagtttcaccatgttagtcaggctgctctcgaactcctgacctcaggtgatccacccgtcttggcctcccaaagtgctaggattacaggtgtgtgccactgcacctggccGGGAGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567335 8 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102014.000000 s hg38.chr19_GL949753v2_alt 65691 286 + 796479 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagtgcagggtttatgtctgctattgctccccactggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcacagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg s panTro4.chr19 58999458 286 + 63644993 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCAATACACTATGCAGTGATTTGGTTAATACTTt-----gtgagttccatgagcgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacggtagacattgaatacatgagtgatacgaggatgaat-CAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggaaggaggatggcttgaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55875873 286 + 60714840 TTCTTTTTTACAACAGCTTAAAGTGCTCTGTAACCGATACACTATGCGGTGATTTGGTTAATACTTt-----gtgagttccgtgagtgcagggtttacgtctgctattgctccccattggaccgccggactctagcacaatg---ccatgcacagtagacattgaatacatgagtgatacgtggatgaat-GAGACTAGGGGAAATC---------------AGTGGAAGCCCTAggcctggcgcagtgactcactcctggaatcccagcactttgggaggccaaggagggaggatggcttgaggccagg i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19567343 289 - 122678785 TCTTTTTTTACATCAGCTCAAAGTGCTCCCTCATCAATACAGTGAGTAGCAATTTGGTTAATGCTTTTCTCAGCGagcatcatgagattagggtttatgcctgctgtcattccccgcttgtccccagcac-ccagcacagtgcccccccacatggagggcattgaaaaaatgtgtgccaagtggatgaatGGGGACCTGGGGGAAGCAAGATTGGGGACCGAAGTGTAAGTCCTAAG--------GGTGAA-CATACCTGGGTT--------TGTGGGAA---AAGGAAAGAGGTCTCATTGAAGCTAAG i canFam3.chr1 I 8 I 2288 e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=56804.000000 s hg38.chr19_GL949753v2_alt 65977 214 + 796479 cattcaagaccagcctggacaacatggtgagatcccatagctataaaaagtaaacaattagccgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggggggtggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcatggtggtggcaca s panTro4.chr19 58999744 212 + 63644993 cattcaagaacagcctggacaacatggtgagaccccatagctataaaaaataaacaattagctgggcgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtgttggtgg--ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876159 212 + 60714840 cattcaagaccagcttggacaacatggtgagaccccatagctataaaaaataaacaattagccgggtgcggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcggatcacgaggtcaatagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagctgggcgtggtggtgg--ca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e nomLeu3.chr10 102635223 1542 - 106955855 M e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=744930.000000 s hg38.chr19_GL949753v2_alt 66191 1475 + 796479 cgcctgtaatcccagcgactcgggagggcgaggcaggagaatcacttgaacccaagaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctc-aa----------------aaaaaaaataataataatagtaataataaattggccaggcgtggtgatggcagtgttgtcattgctttaagaggcaggaacagggggaAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTT------GATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAATGAAATAAGCATTGTGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCAgctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATTGgatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaagcaaaggaaaaagagatgctcaatagaaatgaataaggatgagaatcaatgctagacatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTTCTCTGCTTTGGGTGGAAATACATTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtggtgagccgagatggcgccattgcactccagcctgggcaacaagagcgaaagtccacctcaaaaaaaata-----aaataa----aataaaataaaataaaaaaagagggaaaaagg--aaaaaaaaagaCtccctgatgtgccactgacttcctgtacatgtttagg s panTro4.chr19 58999956 1488 + 63644993 cgcctgtaatcccagcgactcgggaggccgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcgcgtcattgcactacagcctggcaacagagcgagactccatctcaaa----------------aaaaaaaataataataatagtaataataaATTGGCCAGGCGTGGTGATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACAAGTCCCAAGTTAGGCACTTCTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTATGAAAAGATGTTCAGTGGTAGAAAGTGAAATAAGCATTATGACTACATCTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcggtggctcacgcttgtaatcccagctctttaaagggagaccaaggtgggcagatggatcactttaggtcaagcgttcgagaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagccgggcatggtggcaggtgcctgtaatcccagctacttggcagcctgaggcaggagaatcgtttgaacccgggaggtggagattgtagtgagctgagatcacaacactgcactccaacctgggaaacagagcaagactccatctcaaaaagaaaaaaaaTCTCAAGCTTATtggatagataaatgcacaggtagatagatggatattgaatgaataaatagttcagtggattaaaa----actggttaatgaagaaatggatggg-taaatggatggaaatatgaatgaatgcatgatggataaggacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGAAATGAATAAGGATGAGAATCAATGCTAGACatgaatgagtgaatggtgaatgaaggagtgattgaatggatgaatACATGGAGTTAAGTTGAAGTACAAACTCGGCCAAGACTTCTTTTCCTCTGCTTTCGGTGGAAATACGTTTTTAAAAAAAGAGggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgagtttgggagttcgaggccagcctgaccaacacagagaaaccctgtttctactcaaaatacaaaattagccaggtgtggtggctcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcggtgagcggagatggcgccattgcactccagcctgggcaacaagagcgaaagtccgcctcaaaaaaaaaaaaaataaataa----aataaaataaaataaaaaaagagggaaaaagg-aaaaaaaaaagaCtccctgatgtgccactgacttcctgtacacgtttagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55876371 1477 + 60714840 cgcctgtaatcccagtgactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctggcaacagagtgagactccatctc-----------------------aaaataataataataataataataaattggccaggcgtggtgATGGCAGTGTTGTCATTGTTTTAAGAGGCAGGAACAGGGGGAAAAGACCCAGCAGTCTAAGCACACAGACAAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATGACCTATGTGGATCACCCAGCAAGATGACCAGTATGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCagctgggtgcggtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggattacttgagttcaggggttcgaaaacagcctggccaacatggtgaaaccccatctctactaaaaacacaaaattagctgggcatggtggcgggtgactgtaatcccagctacttgggaggctgaggcaggagaatcgtttgaacctgggaggtggagattgtagtgagccgagatcacaacactgcactccaacctgggaaacagagcgagactccatctcaaaaag-aaaaaaaTCTCAAGGTTATtggatagataaatgcataggtagattgacggatattgaatgaataaatagttgagtggattaaaaactgactggttaatgaagagatggatgggttaaatggatggaaatatgaatgaatgaatgatggataaagacaaatga---aatagacaaatgtacaaatgaaAGCAAAGGAAAAAGAGATGCTCAATAGA----AATAAGGATGAGAATCAACGCTAGACatgaatgagtgaacggtgaatgaaggagtgattgactggatgaatACACAGAGTCAAGTTGAAGTACAAACTCGGCCAAGACTCCTTTTTCTTCGCTTTGGGTGGAAATAAGTTTTTAAAAAAAGAGggctgggcacggtggctcacgcctgtaatcccagccctttgggaggccgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcgcacgcctgtaatcccagctactcaggaggctgagccaggagaatcacttgaacctgggaggcagaggtcgcggtgagccgagatcgcgccattgcactccagcctgggcaacaagagcgaaactccgcctc-aaaaaaata-----taataatattaataaaataaaataaaaaAAGAGAGAAAAAGA-AAAAAAAAAAGACT-CCTGATGTG-CACTGACTTCCTGTACACATTTAGG i ponAbe2.chr19 C 0 I 762 s nomLeu3.chr10 102636777 1497 - 106955855 cgcctgttatcccagcgactcaggaggatgaggcaggagaattgcttgaactcaggaggcagaggttgcagtgagacgagttcgcgccattgcactacagcctggcaacagagcgagactccatctcaaataataataataataataataataataataataataataataataaATTTGCCAGGCGTGGTGGTGGCAGTGTTGTCATTGTTTTAAGAGGCACGAACAGGGGGAAAAGACCCAGCAGTCTAACCACACAGACGAGTCCCAAGTTAGGCACTTGTGTGTGTCTTGGGGGCTGTTGATAAAGATCAGAAATAACCTATGTGGATCACCCAGCAAAATGACCAGTGTGAAAAGGTGTTCAGTGGTAGAAAGTGAAATTAGCATTATGACTACAACTCACTCAATAAGCATTCATTGAACACTGGTCACTGGTAAACTGCTATGAAGAAATCTCggctgggtgcagtggctcacgcttgtaatcccagcactttaaagggagaccaaggtgggcagatggatcacttgaggtcaggggttcgagaacagcctggccaacatggtgaaaccccatctctgctaaaaacacaaaattagccaggcatggtggcgggtgcctgtaatcccagctacttgggaggctgaggcaggagaattgtttgaacccaggaggtggagattgtagtgagccgagatcacagcactgcactccaacctgggaaacagagcgagactccacctcaaaaag-aaaaaaaTCTCAAGGTTATTGGATAGATAAATGCATAGGTAGATTGACGGACATTGAATGAATAAATAGTTGAGTGGATTAAAAACTGACTGGTTAATGAAGAGATGGATGGG-TAAATGGATAGAAATATGAATGAATGAATGATGGATAAGGACAAGTGAAATAATAGACAAATGTACAAATGAAAGCAAAGGAAAAAGAGATGCTCAATAGAAATAAATAAGGATGAGAATCAACGCTAGACATGAATGAGTGAATGGTGAATGAAGGAGTGATTGAATGGAGGAATACATGGAGTCAAGTTGAAGTACAAACTCGGCCAACACTACTTTTTCTTTGCTTTGGGTGGAAATAAGTTTAAAAAAAAAGAGggccgggcacggtgactcacgcctgtaatcccagcagtttgggagactgaggcgggtggatcacctgagtttgggagttcgaggccagcctgaccaacatggagaaaccccgtttctactcaaaatacaaaattagccaggagtggtggcacacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaagcagaggtcatggtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaattccgtctcaaaaataata-------ataa-----------taaaataaaaaaagaGGGAAAAAGGAAAAAAAAAAAGACtccctgatgtgccactgacttcctctacacatttagg i nomLeu3.chr10 M 1542 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=104626.000000 s hg38.chr19_GL949753v2_alt 67666 415 + 796479 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGTCTCTTCtttattctttttttttttttttttttttttgagacggagttttgctctgtcacccaggctggagtgtgcagtgatgcaatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccacctgcctcggcctcccaaagtgctaggatcacaggtgtgag s panTro4.chr19 59001444 407 + 63644993 taaacttaatatcacctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaggtctgGTGCCTTCCTTATAACCTGCGtctcttctttattc--------tttttttttttttttgagacggagtttcgctctgtcacccagactggagtgtgcagtgacgcgatctcggctcactacaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttgtccaggctggtctcgaacttctgacttcgtgatccgcctgcctcggcctcccaaagtgctaggatcacaggtgtgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102638274 410 - 106955855 gaaacttaatatcgcctctctttccaccattttcccatttataaagtgggaagactggatttgatgacatcacagcctcatccaagtctgGTTCCTTCCTTATAACCTGGGTCTCTTCtttattc-tttttgtttttgtttttgttttgagacggagtttcg--ctgtcacccaggctgga--gtgcagtggtgcgatctcggctcactgcaatgtctgcctcctgggttcaagcaattatcctgcctcagcctcccgagtagctaggattacaggcacccgccaccacgcccggctaatttttgtatttttagtagacacggggtttcaccatgttggccaggctggtctcgaacttctgacttcgtgacccgcctgcctctgcctcccaaagtgctaggatcacaggtgtgag i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e ponAbe2.chr19 55877848 762 + 60714840 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=19940.000000 s hg38.chr19_GL949753v2_alt 68081 39 + 796479 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT s panTro4.chr19 59001851 39 + 63644993 ccagcacccccggcTTATTCCTTTTTTAAAATTGTTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878610 39 + 60714840 CCAGCACCCCCGGCCTATTCCTTTTTTAGAATTATTATT i ponAbe2.chr19 I 762 C 0 s nomLeu3.chr10 102638684 39 - 106955855 ccagcacccccagtcTATTCCTTTTTTAAAATTATTATT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19567632 2288 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=102233.000000 s hg38.chr19_GL949753v2_alt 68120 163 + 796479 ATTTCCCACAGCCACATA----TGCCGGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT s panTro4.chr19 59001890 163 + 63644993 ATTTCCCACAGCCACATA----TGCCAGGGAGGTTGTCCCACATATGTTCTACCAAGGCCC--CTCTGGCACTGAGATCAAACCCCGGAAGACCCGCTC---AGTCTCTCCTCCCGTCTTTTCAAC--ACGTTAGCGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878649 165 + 60714840 ATTTCCCACAGCCACAAA----TGACAGGGAGGTTGTCCTGGATATGTTCTACCAAGGCCCGACGTTGGTACTGAGATCAAAGCCCAGAAGACCCGCTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTTAGTGCCCCCAGGTGGCTAATTAGACTTCAAAA-TTCAGTTgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638723 165 - 106955855 ATTTCCCACAGCCACTTA----TGCCAGGGAGGTTGTCCCGGATATATTCTACCAAGGCCCCACGCTGCTACTGAGGACAAACCCCGGAAGACCCGTTC---AGTCTCTCCTCCCATCTTTTCAAC--ACGTCAGCGCCCCCACGTGGCTAATTAGACTTCAAAA-TTCAGTTCT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19569920 174 - 122678785 ACTTCCGATATCCACACACAGTTCACAGAGAGATTGCCCAGGACATGCTCCACAGGAGTCCC-CACTGGTACTAAGTGCAAACCCAGAAAGTCCTGCTTGGAAGTCCCTCCTCTTGTCTCTTCAGCAAAAGTCAATGAACCCAGGTGGCTACTTTGATTCCAAAATTTCAGTGCT i canFam3.chr1 I 2288 I 1432 e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 68283 1 + 796479 T s panTro4.chr19 59002053 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878814 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638888 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e papAnu2.chr19 47059389 1323 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=80258.000000 s hg38.chr19_GL949753v2_alt 68284 108 + 796479 gaggcgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggtgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca s panTro4.chr19 59002054 108 + 63644993 gaggtgggcggatcacttgaggtcaggagttcaagaccagtctggtcaacatggcgaaaccccgtctctactaaaaatac---aaacattagccggacatggtggtacgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878815 108 + 60714840 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacatggcgaaaccccctctctactaaaaatac---aaacattagccagacatggtgttacgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638889 108 - 106955855 gaggcgggcggatcacctgaggtcaggagttcaagaccagtctggccaacgtggcgaaaccccgtctctactaaaaatac---aaacattagccagacatggtggcatgca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060712 108 + 51301725 gagacgggcggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaatacaaaaaactagccgggcgaggtggcg-gcg i papAnu2.chr19 I 1323 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e chlSab2.chr6 46770484 1179 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=101500.000000 s hg38.chr19_GL949753v2_alt 68392 100 + 796479 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------cca-cctggccaatttggcaaaactccatctctactaa s panTro4.chr19 59002162 101 + 63644993 cctgtaatcccagctattcgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55878923 101 + 60714840 cctgtaatcccagctattcggaaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102638997 101 - 106955855 cctgtaatcccagctatttgggaggccgaggcaggtggatcacttgaggtcaggag----------------ttcgaga---------------ccaccctggccaatttggcaaaactccatctctactaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47060820 132 + 51301725 cctgtagtcccagctacccgggaggctgaggcaggagaatggcgtaaacccgggaggcggagcttgcagtgagctgagatccggccactgcattccagcctgggcgacagagcgagactccgtctcaaaaaa i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 46771663 101 + 50890351 cctgtaatcccagcactttgggaggctgaggccgatggatcacttgaggtcaggag----------------tttgaga---------------ccaccctggccaatatggctaaactccatctctattaa i chlSab2.chr6 I 1179 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59923259 2242 + 64156825 I a score=195938.000000 s hg38.chr19_GL949753v2_alt 68492 108 + 796479 aaatacaaaaattagctgggcgtgat-agcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac s panTro4.chr19 59002263 108 + 63644993 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcggatgttgcagtgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879024 108 + 60714840 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggagactgaggcacgagaatcacttgaacccgggaggcagaggttgcagtgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639098 108 - 106955855 aaatacaaaaattagctgggcgtgat-ggcgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcatttgaacccaggaggcggagattgcagtgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925501 108 + 64156825 aaatacaaaacttagctgggcgtggt-ggtgtacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i rheMac3.chr19 I 2242 C 0 s papAnu2.chr19 47060969 108 + 51301725 aaatacaaaacttagctgggcgtggt-ggtgcacacccgtaatcccagctactcaggaggctgaggcacgagaatcacttgtacccgggatgtggaggttgcagtgaac i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 46771764 109 + 50890351 aaatacaaaacttagctgggcgtggtgggtgcacacctgtaatcccagctactcaggaggctgaggcacgagaatcacttgaacccaggaggcggaggttgcagtgaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45333611 1953 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=660226.000000 s hg38.chr19_GL949753v2_alt 68600 325 + 796479 cgagatcacgccactgcactccagcctgggtg---gagtgagatcttctctc-aaaaaaaaaaaagaaagaaag------------aaagaaaaagtcgtgcttgatTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagAGTTGGGGAAGGGCGCTTTCTGAATGCT s panTro4.chr19 59002371 332 + 63644993 cgagaccacgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaagaaagaaagaa------agaaaaAGAAAAAGTCGTGCTTGATTATGCTTGA-TGGCAAAAAGGTGAGACCTTCCTTTCGGCACTGTGTCTGGTAGAAATCGGTGTTACAGGGtagctaatatttattgaacacttactacgggccagttactgctttaaatgttttatgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtccgggcaagagagagctggggaaggGCGCTTTCCGAATGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879132 335 + 60714840 cgagatcgtgccactgcactccagcctgggtg---gagtgagatcttctctcaaaaaaaaaaaaaaaagaaaagaaaa---gaaaGAAAGAAAAAGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGGCACTGAGTCTGGTAGAAATCGGTGTTACAGGGtagctaacatttattgagcacttactacgggccagttactgttttaaatgttttgtgtgtattacccactgaatcctacaacaatcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaagagagagttggggaagGGCGCTTTCTGAATGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639206 327 - 106955855 cgaaatggcgccactgcactccagcctgagtg---gagtgaaatcttctctcaaaaaaaaaaaaaaaaggaaag--------aaagaaaaAAAAAGTTGTGCTTGATCATGCTTGA-TGGAAAAAAGGTGAGACCTTCCTTTCGACACTGAGTCTGGTAGAAATCGGTGTTACAGGGtaactaacgtttattgagcact---tacgagccagtcactgttttaaatattttatgtgtattacccactggatcctacaacagtcctatgaagtgggttttatcagtgcatccattttaccgtcaaggcaaGACAGAGTTGGGGAAGGgtgctttctgaatgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59925609 314 + 64156825 cgagatcgtgccactgccctccagcctgggtgatagagtgagatcttctctc--------------------------caaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcattgagcacttactacgggccagttactgttttaaatgttttatatgtattacccactgaatcctacaacaatcctatgaaatggcttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061077 311 + 51301725 cgagatcgtaccactgcactccagcctgggtgatggagtgagatcttctctc-----------------------------aaaaaaaaaaaaaagttgtgcttGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCGGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGTAGCTcacattcattgagcacttactacGGGCCAGttactgttttaaatgttttatatgtattaccCACTGAATCCtacaacaatcctatgaaatGGGTTTTATCAGTGCATCCATTTCACCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46771873 340 + 50890351 cgagattgcgccactgcactccagcctgggtgatggagtgagatcttctctcaaaaaaaacaaaacaacaacaaaaaaaaaaaaaaaaaaaaaaaGTTGTGCTTGATTATGCTTGA-TGGAAAAAAGGTGAGACCTTCTTTTCAGCAATGAGTCTGGTAGAAATCGGTGTAATAGGGtagctcacattcgttgagcacttactacgggccagttactgttttaaatgttttatgtgtgttatgcactgaatcctacaacaatcctatgaaatgggttttatcagtgcatccatttcacCGTCCAGGCGAGAGAGAGTT-GGGAAGGGCGCTTTCTCAATGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335564 302 + 49145316 caagattgaaccactgcactccagcctgggcgacagagtgagactttc-------------------------------------aaaaaaaaaaaTTGTGTTTGATTATGCTTAATTTAAAAAAAGGTGAGACCTTCCTTTCG---CTGAGTCTGGTAGAAATCGGTGTTATAGGatagctaacattcactgagaatttactgcaagccagttactgttttaagtgttggatgtgtgttacccactgaatcctacaacaattctatgaagtaggttttatcagtgcgtccatattaccgtcaaggcaagagagagttggggaagggcactttccgaatgct i calJac3.chr22 I 1953 I 5 e canFam3.chr1 19570094 1432 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=427330.000000 s hg38.chr19_GL949753v2_alt 68925 310 + 796479 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagagttagcagcagcaagatttattgtgtagagcaagagaacaaagctcccacagcgtggaagcagactctggtggggtgccgc-gctcgccagcttttattccctta-ttgtccccgcccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgctgattggtccattttaca s panTro4.chr19 59002703 334 + 63644993 GCTACcgtgtccagagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtggtgagtgttacagcgcttaaagatggcacggacctaaagggttagcagcagcaagatttattgtgtagagcaagagaacacagctcccacagcgtggaagcggactctggtggggtgccgc-gctggccagcgtttattccctta-ttgtccccgcctatgtcctgctgattggtccattttacagagcactgattggtccatcttacagagtgctgattggtccattttacagagtgctgattggtccattttaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879467 305 + 60714840 GCTACtgtgtgcggagttggttccttcctgtgggtttgtggtctcgctgactttaagaatggagccagggaccttcgtg----gtgttacagcacttaaagatggcacggacctaaagagtttgcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagcgtggaagggaactctggtgcggtgccgc-gctggctagcttttatt-cctta-ttctccccatccatgtcctgctgattggtccattttacagagc------------------------gctgattggtccatcttacagagtgcagattggtccattttaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102639533 310 - 106955855 gctactgtatctggagttggttccttcctgtgggtttgaggtctcgctgactttaagaatggagccacggaccttcgtggtgagtgttacagcacttaaagatagcacacacctaaagagttggcagcagcaagatttattgtgtagagcaagagaacaaagcttccacagtgtggaagaggactctagcagggtgccgc-gccggctagcttttattccctta-ttgtccccgcccatatcctgctgattggtccattttacagagc------------------------gctgattggcccatcttacagagtactgattggtccattttaca i nomLeu3.chr10 C 0 I 1535 s rheMac3.chr19 59925923 263 + 64156825 GCCACcgcgtccggagttggttccttccagtgggtttgtggtctagctgacttcaagaatgcagccccagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagcctggaaggggacccgagcagggtgccaatgctggctagcttttattcccttatttgtccccgcccatgtcct------------------------------------------------gctgattggtccattttaca------------------------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061388 287 + 51301725 GCCACCGCCTCgggagttggttccttccagtgggtttgtggtctggctgacttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggaccc-aagagtgagcagcagcaaaatttattgtgaagagcaagaGAACACAGCTTCCACAGcctggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgattggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772213 287 + 50890351 GCCACcgcgtccggagttggtt-cttccagtgggtttgtggtccggctgccttcaagaatgcagccgcagaccttcgcggtgagtgtcacagctcttaaagatggcatggacccaaagagtgagcagcagcaaaatttattgtgaagagcaagagaacacagcttccacagactggaaggggacccaagcaggttgccgctgctggctagtttttattcccttatttgtccccgcccatgtcctgctgactggtccactttacagagc------------------------gctgattggtccattttaca------------------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=158443.000000 s hg38.chr19_GL949753v2_alt 69235 92 + 796479 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG s panTro4.chr19 59003037 92 + 63644993 atcctcttgtaagacagaaaagttctccaggtccccattcaacccaggaagtccagctggcttcacgtctcaCTACTACCTTTCTGTAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879772 92 + 60714840 atcctcttgtaagacagaaaagttctccaagtccccattcaacccagaaagtccagctggcttgacgtctcaCTACTACCTTTCTGTAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641378 88 - 106955855 atcctcttgta----agaaaagttctccaagtccccattcaacccaggaagtccagctggcttcacctctcaCTACTACCTTTCTGTAGCTG i nomLeu3.chr10 I 1535 C 0 s rheMac3.chr19 59926186 92 + 64156825 atcctcttgtaagacagaaaagttctccaagcctccactcgatccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061675 92 + 51301725 atcctcttgtaagacagaaaagttctccaagctTCCACTCGACCCAGGAGGTCCAGCTGGCTTCCCCTCTCACTGCTACCTCTCTGTAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772500 92 + 50890351 atcctcttgtaagacagaaaagttctccaagcctccactcgacccaggaggtccagctggcttcccctctcaCTGCTACCTCTCTGTAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19570094 1432 - 122678785 I e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=21685.000000 s hg38.chr19_GL949753v2_alt 69327 13 + 796479 CTACTACT---acagt s panTro4.chr19 59003129 13 + 63644993 CTACTACT---acagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879864 13 + 60714840 CTACTATT---acagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641466 13 - 106955855 CTACTACT---acagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926278 16 + 64156825 CTACTACTACcacagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061767 16 + 51301725 CTACTACTACCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772592 16 + 50890351 CTACTACTACcacagt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571526 13 - 122678785 ctaatatc---ccagc i canFam3.chr1 I 1432 C 0 e calJac3.chr22 45335866 5 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=300960.000000 s hg38.chr19_GL949753v2_alt 69340 123 + 796479 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactaATCGCGTCTTCCTTTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC s panTro4.chr19 59003142 123 + 63644993 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCTCTCAGCTACTCCTTGGGAAAGGCCTGGAAAGAAGCTACAGCACAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55879877 123 + 60714840 gagtggacggcagtgctgggattcgaaccctctgtcttctggcttggacgtcttaaccactGATCGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCTGCAAAGAAGCTACAGCACAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641479 123 - 106955855 gagtagacggcagtgctgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCACGTCTTCCACTTGGCTACTCCCTGGGAAACGCCTGGAAAGAAGCTACAGCACAGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926294 123 + 64156825 gagtagacggcagcactgggattcgaaccctctgtcttctggcttggaagtcttaaccactGATCGCGTCTTCCACTCAGCTACTCGTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061783 123 + 51301725 GAGTAGACGGCAGCGCTGGGATTCAAACCCTCTGTCTTCTGGCTTGGAAGTCTTAACCGCTGATTGCGTCTTCCACTCAGCTACTCCTTGGGAAAGACCCGGAAAGAAGCCACAGCACAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772608 123 + 50890351 gagtagacggcagcgctgggattcgaaccctctgtcttctggcttggaaatcttaaccactGATGGCGTCTTCCACTCAGCTACTCCTTGGGAAAGGCCCGGAAAGAAGCCACAGCACAGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45335871 105 + 49145316 gagtagatggcag-gctgggattcgaaccc-cagtctcctggctcggaagccttaaccac----------------tcagctGCTCCTTGGGAAAGGCCCAGAGAGAAGCCACAGTGCAGGGC i calJac3.chr22 I 5 I 348 s canFam3.chr1 19571539 120 - 122678785 gagtgagcagcagcactgggactcaaaccc-aggcCTCGTGACTAGGAAGACACAACCATAGATAGAGCCTTCCACTGATCTACTAG--AGGAATGACCCAGAAGGGAGCTAGAGAACACAGT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=47980.000000 s hg38.chr19_GL949753v2_alt 69463 33 + 796479 ACAGCGGGGTCTA--AGGACCGTTCCGCGGAGCTC s panTro4.chr19 59003265 33 + 63644993 ACAGGGGGTTCTA--AGGACCGTTCTGCGGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880000 33 + 60714840 ACAGGGGGGTCTA--AGGACCGTTCCGCGGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641602 33 - 106955855 ACAGGGGGGTCTA--AGGACCGTTCCACGGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926417 33 + 64156825 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061906 33 + 51301725 ACAGGGGTGTCAA--AGGGCAGTTCCTCGGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772731 33 + 50890351 ACAGGGGTGTCGA--AGGGCAGTTCCTCGGGGCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19571659 32 - 122678785 ---AGGAAGTTTATTGTGACTCAGAAGCTGAGCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=44443.000000 s hg38.chr19_GL949753v2_alt 69496 19 + 796479 AGCCAGCAGGACTGTGGGG s panTro4.chr19 59003298 19 + 63644993 AGCCAGCAGGACTGCGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880033 19 + 60714840 AGCCATCAGGACTGCGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641635 19 - 106955855 GGCCAGCAGGACTGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926450 19 + 64156825 AGCCAGCAGGGCTGCGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061939 19 + 51301725 AGCCAGCAGGGCTGTCGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772764 19 + 50890351 AGCCAGCAGGGCTGCGGGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3610685 19 + 145441459 AGTCTGGAGGCCTAGAGTG i mm10.chr7 N 0 C 0 s canFam3.chr1 19571691 19 - 122678785 AGCCAGGAGGACTGAGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45335976 348 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=1002574.000000 s hg38.chr19_GL949753v2_alt 69515 355 + 796479 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCATCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCTACAGTCTCAAAGTtgagggggagtcgatg s panTro4.chr19 59003317 355 + 63644993 CTGTGGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGC---------------TGCAGTACTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCGGTTCTGACTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGCCCGGCCAGCCCCAGGCGGACTAGGTTCCCCCGGGTGTAGTCGGAGGAGCCAGAGTCTGCGGGCGGAGCCGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGCCTCAAAGTtgagggggagtcgatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880052 355 + 60714840 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCGCTACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGCTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCGCCGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTTCCCCGGGTGTAGTCGGAGGAGCCAGGGTCTGCGGGCGGAGCTGGGAGAGAGGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTGGACTTAGGGACCTGACTCCACAGTCTCAAAGTtgagagggagtcgatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102641654 355 - 106955855 CTGCAGAAAAGGACAGTCCA-GCCCAGGGTCTCAGCTTCTCCGCCACTCAGGTTGGAAG---TCTCGGGT---------------TGCAGTGTTCCTGGGGCTCAGGGGCGGATACCAGCAGGAGCACGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGCGCACCCAGGGACATGAGAACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCTGGGTGTAGTCGGAGGAGCCAGAGTCTGTGGGCGGAGCCGGAAGAGAGAGGCCATCAGCTCCCGGACCTCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAGCCCCTGGGGTggacttagggacctgactccacagtctcaaagttgagggggagtcgatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926469 357 + 64156825 CTGCAGGAAAGGACAATCCA-GCCCAGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCACGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGGGCCGGGAGAGACGGGTCGTCAGCTCCCGGATTCCGAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47061958 356 + 51301725 CTGCAGGAAAGGAC-GTCCA-GCCCGGGGTCCCAGCCTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGCTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGGTTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCGGAGCCGGGAGAGACGGGCCGTCAGCTCCCGGACCCCAAAGTCTGGGCCCTGAACTCCAGGTTTCCAG-CCCTGGGGTGGACTTGGGGACCTGACTCCTCAGTCTCAAAGTTGAGGGGGAGTCGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46772783 357 + 50890351 CTGCAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCCATCACTCAGGTTGGAAGTCTTCTCGCGT---------------TGCAGTGCCCCTGGGGCTCAAGGGCGGACACCAGCAGGAGCGCGGTTCTGGCTGCGCCAGTCAAAAGTGACCAGTGCGCCCAGGGAGATGAGGACCAGACCGGCCAGCCCCAGGCGGACAAGATTCCCCCGAGTGTAGTCGGAGGAGCTAGAGTCTGCGGGCAGAGCCGGGAGAGGCGGGCCGTCAGCTCCCGGACCCCGAAGTCTGGGACCTGAACTCCAGGTTTCCAG-CCCTGGGGTggacttggggacctgactcctcagtctcaaagttgagggggagtcgatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336324 356 + 49145316 CCACAGGAAAGGACAGTCCA-GCCCAGGGTCCCAGCTTCTCTGCCACTCAGGTTGGAAGTCTTCTGGGGT---------------TGCAGCGCCCCTGGGGCTCAGGGGCGGACGCCAGCAGGAGCGTGGTTCTGGCTGCGACAGTCAAAAGCGACCAGCGCGCCCAGGGAGATGAGGACCAGACTGGCCAGTCCCAGGCGGACCAGGTTCTCCCTGGTGTAGTCGGAGGAGCTGGAGTCTGCGGGCCGAGCCGGGAGAGAGGGGCTGTCATCGCTTGGACCCAGAAGTCTAGGCCCTGAACTCCAGGTCTCCTGTCCCTggggtggacttaggggcctgactccccagtctgaaagttgaggggagtt--atg i calJac3.chr22 I 348 C 0 s mm10.chr7 3610704 318 + 145441459 -TTTCAGAGGGGCTGGTC---ACCAAGGATCCCAGCTTCTCTGTCCATC-TCCAGGCAG---TCTC-------------------TTCAGTTTTGCTGGGGC-------AGGAGACCATCAAAGGCAGAGCTCCTGCTGTGCCAATCACAAGTAACTATGATGCCCAAGCAGATGAGGACCATTCCTGCCAGCCCCAAACGGATGAGGTTTCCCTGGGTATAGTCCAAGGAGCCAGAACCTGCGAGCCAAAACGAGGGAGACAGGGTGTTGGTTC-TGTATCCCAGAGTCTTGTTGCTT--TTCTGTGTTTCTGA-CACACAGATGGAGTT-----------------GTCTCTAAGTTTA-ATGGAGTTGATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19571710 364 - 122678785 CTCTTGAAAGGGCCTGTCCACCCCCAGGAAACCTATTTCTTCTCCCCATCTCTGGGAAGTCTTCTCACACTTGGAGGCATCTGTATCCAGT-CCTCTGGGGCTCAGGGCCTGACGCT-GCCTGGGTGCGACTCTGGCTGTGCCAGTCAAAAACAACCAGTGTGCCCAGGGAGATGAGGACCAGGCCAGCCAACCCCAGGCGGACGAGGTTGCTCTGAGTGTAGTCCAAGGAGCCTGAGCCTGTGGG----ACAGCAAGAGAGAGGCCTTCAGCTC-CAGAACCCAGAGTCTGGG-CCTGCCATCTGGGTCTTGAACCTACAGGGTGATACTGGGGACACAGCTCC-CAGTCTCAAAGTTGAGATGG-GTCAGTG i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=53918.000000 s hg38.chr19_GL949753v2_alt 69870 21 + 796479 -------gaggcttcaactcctgggtcc s panTro4.chr19 59003672 21 + 63644993 -------gaggcttcaactcctgggtcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880407 21 + 60714840 -------gaggcttcaactcctgggtcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642009 21 - 106955855 -------gaggcttcaactcctgggtcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926826 21 + 64156825 -------gaggtttcaactcctgggtct i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47062314 21 + 51301725 -------GAGGTTTCAACTCCTGGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773140 21 + 50890351 -------gaggtttcaactcctgggacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45336680 21 + 49145316 -------gaggcttcacttcgtgggtct i calJac3.chr22 C 0 I 293 s canFam3.chr1 19572074 28 - 122678785 GGAGCAGGGGTCCTGGACTCCTGGGTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=77170.000000 s hg38.chr19_GL949753v2_alt 69891 31 + 796479 aggaagaaggggct-ggggcctggactgctgg s panTro4.chr19 59003693 31 + 63644993 aggaagaaggggct-ggggcctggactcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880428 31 + 60714840 aggaagaaggggct-ggggcctggactcctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642030 31 - 106955855 aggaagaaggggct-ggggcctgcactcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59926848 31 + 64156825 agggaggagggtct-ggggcctggactcccgg i rheMac3.chr19 I 1 I 2 s papAnu2.chr19 47062335 32 + 51301725 AGGAAGGAGggactgggggcctggactcctgg i papAnu2.chr19 C 0 M 1323 s chlSab2.chr6 46773161 32 + 50890351 aggaaggagggactgggggcctggattcctgg i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45336994 31 + 49145316 agggaggagggact-ggggcctggactcctgg i calJac3.chr22 I 293 I 2 s canFam3.chr1 19572102 30 - 122678785 -GGGAGAAGGGGGT-AGAGTCATGACCCCTAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=5254.000000 s hg38.chr19_GL949753v2_alt 69922 9 + 796479 atcaggaag s panTro4.chr19 59003724 2 + 63644993 at------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880459 9 + 60714840 atcaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102642061 9 - 106955855 atcaggaag i nomLeu3.chr10 C 0 M 1589 s rheMac3.chr19 59926881 9 + 64156825 ctgagggag i rheMac3.chr19 I 2 C 0 s chlSab2.chr6 46773195 9 + 50890351 ctgagggag i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45337027 9 + 49145316 ccgagggag i calJac3.chr22 I 2 C 0 s canFam3.chr1 19572132 9 - 122678785 ACTGGGGAG i canFam3.chr1 C 0 I 4 e mm10.chr7 3611022 0 + 145441459 C e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=29011.000000 s hg38.chr19_GL949753v2_alt 69931 29 + 796479 gaggggctgggggcctggagtcctgggtc s ponAbe2.chr19 55880468 29 + 60714840 gaggggctgggggcatggagtcctgggtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59926890 29 + 64156825 gaggggctgggggtctggactcccgggtc i rheMac3.chr19 C 0 M 1236 s chlSab2.chr6 46773204 29 + 50890351 gaggggccgggggcctggactcctgggtc i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337036 28 + 49145316 gagggact-ggggcctggactcctgggtc i calJac3.chr22 C 0 I 1 s canFam3.chr1 19572145 29 - 122678785 GAGGAATCAGGGGCCTGGATCCTTGGGCT i canFam3.chr1 I 4 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e panTro4.chr19 59003726 0 + 63644993 C a score=49811.000000 s hg38.chr19_GL949753v2_alt 69960 65 + 796479 ---caggaaggaggggctgggggcctggagtcctgggtctgaggg--aggaggtactggggcccgggaat s panTro4.chr19 59003726 65 + 63644993 ---caggaaggaggggctgggggcctggagtcctgcgtctgaggg--aggaggggctgggtcccaggaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880497 65 + 60714840 ---caggaaggagggactggcggcctggagtcctgggtctgaggg--aggaggtattggggcccgggaat i ponAbe2.chr19 C 0 I 221 s chlSab2.chr6 46773234 65 + 50890351 ---gagggaggagggaccgggggcctggactcctgggtctgaggg--aggaggggccgggggcctggact i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337065 63 + 49145316 ---gagggaggaggg--ctggggcctggactcctgggtccgaggg--aggagggactggggtcctggact i calJac3.chr22 I 1 C 0 s canFam3.chr1 19572174 68 - 122678785 GGGGAGCAGGGAGAGGCTGGGAACCCAGACACCTGGGATAGGGAGCAGGGAGGAACCAGGTCTCAGAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=24438.000000 s hg38.chr19_GL949753v2_alt 70025 64 + 796479 -cctgggtct------------------------------------------------gagggaggaggagctggaggactagactcctggatctga-ggg---------aggaggggctggg- s panTro4.chr19 59003791 48 + 63644993 -cctgggtct------------------------------------------------gagggaggaggggctgcaggactagacccctgggtctga--------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880783 64 + 60714840 -cctgggtct------------------------------------------------gagggaggaggggctggaggactagacccctgggtctga-ggg---------aggaggggctgga- i ponAbe2.chr19 I 221 C 0 s chlSab2.chr6 46773299 113 + 50890351 -cctgggtctgagggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgggtcgtggagggaggaggggccgggggtctgggctcctgggtctggaggg---------aggaggggccggg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337128 60 + 49145316 -gctgggtct------------------------------------------------gagggaggagg-gctgg-ggcctggactgctgggtccga-ggg---------aggagga--ctgg- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572242 77 - 122678785 CCCAGGGTTGGG----------------------------------------------GAGCAGGGAGGAACCCGAGGCCTGGATCCCCTGGCTGGG-GAGTAGGGGCCAAGGTGGGGGCTGGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611022 0 + 145441459 C e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=13869.000000 s hg38.chr19_GL949753v2_alt 70089 72 + 796479 tcccaggaatcctgggtctgaggg-aggaggggctgcagga----ctagacccctgggtctgaaggaggagaggctg s panTro4.chr19 59003839 14 + 63644993 ---------------------------------------------------------------aggaggagaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880847 72 + 60714840 ggactagacccctgggtctgaggg-aggaggggctgcggga----ctagacccctgagtctgaaggaggagaggctg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46773412 73 + 50890351 ggcctggactcctgggtctggggg-aggaggggctggggggc---ctgggctcctgggtctgggggaggaggggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45337188 69 + 49145316 ggcctggactgctgggtccgaggg-aggagggct---gaggc---ctggactcctgggtctgagggaggag-ggctg i calJac3.chr22 C 0 C 0 s mm10.chr7 3611022 32 + 145441459 -----------------------------------------TCCCCTGGTCGCCTGGGTCTGAAGGAGGAGAG---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572319 55 - 122678785 --------TCCCTGGGCTGGGGAGTAGGGAGGAACAGGGGGC---CCGGACTCCTG-----------GCAGGGGCTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e papAnu2.chr19 47062367 1323 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=37676.000000 s hg38.chr19_GL949753v2_alt 70161 36 + 796479 ggggcctgggctcctgggtctgagggcggaggtcct-- s panTro4.chr19 59003853 36 + 63644993 ggggcctgggctcctgggtctgagggcggaggtcct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880919 36 + 60714840 ggggcctgggctcctgggtctgagggaggagggcct-- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47063702 35 + 51301725 GGGACCTGGGCTCCT-GGTCTgagagaggaggggct-- i papAnu2.chr19 M 1323 C 0 s chlSab2.chr6 46773486 36 + 50890351 ggggcctgggctcctgggtctgggggaggaggggct-- i chlSab2.chr6 I 1 I 1 s calJac3.chr22 45337257 34 + 49145316 -gggcctggactcctgggtccgagggaggaggact--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611054 11 + 145441459 ----CCAGAGCTTCT----------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19572374 38 - 122678785 GGGGCCCGGACCCCTAGATTGGGGAGCAGGGAGGCACC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102642070 1589 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=53795.000000 s hg38.chr19_GL949753v2_alt 70197 40 + 796479 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT s panTro4.chr19 59003889 40 + 63644993 ggggcctgcattcct-------ggggc----ggaggaggcgggCCGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880955 40 + 60714840 ggggcctgcattcct-------ggggc----ggaggaggcgggccgggCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643660 40 - 106955855 GGGGCCTGCATTCCT-------GGGGC----GGAGGAGGCGGGCCGGGCCT i nomLeu3.chr10 M 1589 C 0 s papAnu2.chr19 47063737 39 + 51301725 gggaccTGTATTCCT-------GGGGC----TGGGGAGACGGGCCGGCGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773523 39 + 50890351 ggggcctgcgttcct-------ggggc----tggggagacgggccggcgg- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45337291 39 + 49145316 ggggcctggactcct-------gggtccgagggaggcggCGGGCCG----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19572412 46 - 122678785 GGAGGCCGGACTCCCCCGCCAGGGAGC----AGGGGCTGCGGCCGGGCGC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611065 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59926919 1236 + 64156825 M a score=1080960.000000 s hg38.chr19_GL949753v2_alt 70237 350 + 796479 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCGGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGCGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGACCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---GTCTTCC---Gctcgctcgctc s panTro4.chr19 59003929 346 + 63644993 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCTGGGGCGCGGGCGCCCAGCAGCGTGAAGTCGGCCCAGGGCTGTGCGGAGTGGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCGCGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCGGGGCCGCGTGAGC---Gtcttc-------cgctcgctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55880995 350 + 60714840 CAGGGCCCTCACCTTCCCGGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGGGCGCCGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCACGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGAGCCACCAGCGACGGCCGCGGCAGCTCCTCTGC--AGAGACGGGGTGAGAGTCCCGGGCCGCGTGAGC---GTCTTTC---GCTCGCTCGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102643700 345 - 106955855 TAGGGCCCTCA-CTTCCCAGCTGATGACCAGCACCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGATAGTAGCAGCTGTAGGTGCCCGGGGCGCGGGCGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCCGCGCAGCGCAGGCTCAAGTTGGCGCCAGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTTCTCTGC--GGAGACGGGGTGAGGGTCCGGGGCCGCGTGAGC---GTCTTC-------CGctcgctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59928179 316 + 64156825 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCG----------------------------------GCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCC---GCTGGctcgctc i rheMac3.chr19 M 1236 I 2447 s papAnu2.chr19 47063776 350 + 51301725 CAGGACCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCTCCGGGAGCCACCACCGGCCCGGGCAGCGCCACCAGCGACGGCCGCGGCAGCTGCTCTGC--GGAGACCGGGTGAGAGTCGGGGGCCGCGTGAGC---GCCTTCA---GCTcactcgctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773562 350 + 50890351 CAGGGCCCTCACCTTCCCAGCTGATGACCAGCGCCTCGCTGCGCTGCGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGAGCGCGGGCGCCCAGCAGCGGGAAGTCAGCCCAGGGCTGCGCGGAGTCGCGGTACTGCAGCGGGGCCGCCACGCCCTCGCGGTACAGCACGAAGCTCATGTTCCGCAGGCGGCCGGCGCAGCGCAGGCTTACGTTGGCGCCGGGAGCCACCACCGGCCCAGGCAGCGCCACCAGTGAGGGCCGCGGCAGCTGCTCTGC--GGAGACGGGGTGAGAGTGGGGGGCCGCGTGAGC---GCCTTCC---GCTCTCTCGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337330 344 + 49145316 CAGGG-CCTCACCTTCGGAGCGGACGGCCAGCACCGGGCTGCGCGGGGACAGCACGTAGGGCGCGGAGGGCGTGTGGTAGTAGCAGCTGTAGGTGCCGGGGGCGCGGACGCCCAGCAGCGGGAAGTCGGCCCAGGGCTGCGCGGAGTCGCGATACTGCAGCGGGGCCGCCACGCCCACGCGGTACAGCACGAAGCTCATGTTCCGCAGGCCGCCCGCGCAGCGCAGGGTCACACGGCCGCCGGGGGCCACCACCGACCCGGGCAGCGCCACCAGCGACGGGCGCGGCAGCTCCTCTGC--GGGCGGGAGGCGGGAGGC--GGACCGCGTGGGC---GCCTTTCCAGGAGCGC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3611065 339 + 145441459 ---------TACCTTCGAAACTGATGACCAGTGGCTGGCTGCGCTGTGATAGCACATAGGGGGCAGAAGGCGTGTGGTAATAGCAACAGTAGGTGCCAGGTGTGTGTGTGCCGATCAAAAGGAAGTCAGCCCAGGGCTGCACAGAGTCAATATACTGCAGAGGGGTTGCCACGCCTACGCGGTACAGTGCAAAACTCATGCCCGGTATGCGGCCTGCACAGCGCAGGCTTACGTTGGCTCCCGGGGCCACCACAGGCCCAGGCAGTGCCACCAGTGATGGTCTGGGGAGCTGATCTGT--GGAACACAGGCAAG-GTCTTAGATAGGCTATCT---GTCCTG----AATGGtcctctc i mm10.chr7 C 0 C 0 s canFam3.chr1 19572458 343 - 122678785 -CGGGCCCTTACCGTCAGCGCTGATGACCAGCGGCTCGCTGCGCAGCGACAGCACGTACGGGGAGGACGGCGTGTGGTAGTAGCAGCTGTAGGTGCCCGGCGCGCGGGCTCCGGGCAGCGGGAAGTCGGCCCAGGGCTCCGCCGAGTCGCGGTACTGCAGCGGCGCCGCCACCCCCACGCGGTACAGCGCGAAGCTCATGCCCCGCAGGCGGCCGGCGCAGCGCAGGCTCACGTTGGCATCGGGCGCCACCACCGGCCCGGGCAGCGCCACGAGCGACGGGCGCGGCAGCTGGTCTGCGAGGGGCACGGGCGGGGGCGAGCGCTGGCGCGGGCCTGGCccccc---g----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=57000.000000 s hg38.chr19_GL949753v2_alt 70587 104 + 796479 gctctgtttctccttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctctctct s panTro4.chr19 59004275 104 + 63644993 gctctgtttctctttct-cctctgtctctcgc------------------------------------------------------------tttctctgtgcc-tctctctctctttctgc----ctctctt---------------tctctctgcctg--tctctctctctgtctgcctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881345 111 + 60714840 Gctctctttctctttctgcctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctctctgcctctctctctt---------------tctctctgcctgcctctctctctctctctgcctctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644045 97 - 106955855 gctgtctt----------tctctgtctctcgc------------------------------------------------------------tttctctctgcc-tctctctctctttctgt--ctctctctc---------------tctgtctgcctg--tctctctctctgtctgcctgtctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064126 161 + 51301725 ------tctctctttctgcctctgtctctctctctctctgtctttctcttcctctctgcctgtctctctctttctctctgcctgtctctctctttctttctgcc-tctctctttctttctgc--ctgtctctt---------------tctctctgcctg--tctctctttctctctgcctgtctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773912 71 + 50890351 ----TCTTTCTCTTTCTGCCTCTGTCTCTCTC-----------------------------------------------------------------------------------------------TCTCTT---------------TCTCTCTGCCTG--TCTCTCTCTCTCTCTGCCTGTCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337674 95 + 49145316 ------------Gctctgcctgtgtctctctt-----------------------------------------------------------ctctctttcctctgtctctctctcgttctgcctctgtctctt---------------tctcgctccc----tctgtctctgtctctgtctctct-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3611404 101 + 145441459 ------------------cctcctcctccctt------------------------------------------------------------ctcttctgcctc-ccttcccatcccccaaactctctcccctcAGTAAGTTCAGGAATTTCTCAGTGTA--CCTCCCTATC-----GCCTCTCTCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572801 46 - 122678785 ----------------------------------------------------------------------------------------------gccctgcgcc-cctc-----------------ctcccgc---------------tccccgaccctg--tgcccc-------cggcctg----- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2692.000000 s hg38.chr19_GL949753v2_alt 70691 2 + 796479 ct s ponAbe2.chr19 55881456 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644142 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47064287 2 + 51301725 ct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773983 2 + 50890351 CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337769 2 + 49145316 ct i calJac3.chr22 C 0 C 0 s mm10.chr7 3611505 2 + 145441459 TT i mm10.chr7 C 0 I 1 e canFam3.chr1 19572847 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4280.000000 s hg38.chr19_GL949753v2_alt 70693 19 + 796479 gcctccctctctctctgcc s ponAbe2.chr19 55881458 19 + 60714840 ttctctctgcctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064289 17 + 51301725 --ctttctctctgcctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46773985 15 + 50890351 --C--TCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45337771 19 + 49145316 ttctcttttttttttagcc i calJac3.chr22 C 0 I 893 s mm10.chr7 3611508 15 + 145441459 TGTTCCTTTTCTACC---- i mm10.chr7 I 1 I 1 s canFam3.chr1 19572847 19 - 122678785 gcccccttctcccgctgcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=4446.000000 s hg38.chr19_GL949753v2_alt 70712 15 + 796479 ----tccctctct--ctgcct s ponAbe2.chr19 55881477 15 + 60714840 ----tctctctct--ctgcct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47064306 17 + 51301725 ----tctctctctgcctgtct i papAnu2.chr19 C 0 I 2765 s chlSab2.chr6 46774000 15 + 50890351 ----TCTCTCTCT--CTGCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611524 14 + 145441459 ----TCTCCTACC--CTCCT- i mm10.chr7 I 1 C 0 s canFam3.chr1 19572866 15 - 122678785 tccgcctcctgct--ct---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=10439.000000 s hg38.chr19_GL949753v2_alt 70727 35 + 796479 ccctc----tctctctgcc----tccctctctctctgcctccc s ponAbe2.chr19 55881492 41 + 60714840 ctctctctttctctctgcctg--tctctctctctctgcctctc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067088 39 + 51301725 ctctt----tctctctgcctgtctctctctctctctgcctgtc i papAnu2.chr19 I 2765 C 0 s chlSab2.chr6 46774015 35 + 50890351 GTCTC----TCTCTCTGCCTG----TCTCTCTCTCTGCCTGTC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3611538 36 + 145441459 ------TCACCTCACT-CCTGTGCCCTTCTCCCATTTCTTCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19572881 35 - 122678785 cgttc----cctctccgcc----gctcaccgacgcccctgccc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=33036.000000 s hg38.chr19_GL949753v2_alt 70762 117 + 796479 tc----tctctctgc--------ctccctctctctctgcctccctc----tctctctgcctgcctctctctttgcctgcctctctctctgcctccctct-------------ctctgcctccctctctctctgcctccctctctct s ponAbe2.chr19 55881533 129 + 60714840 tctctttctctctgcctgcct--ctctctctctctctgcctctctctctttctctctgcctgtctctctctct--ctgcctctctctctttctctctgc-------------ctgcctctctctctctctctgcctctctctcttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47067127 129 + 51301725 tctc--tctttctctctgcct--gtctctctctttctgcctgtctctctttctctctgcctgtctctctctctctctgcttgtctctctctctctctct-------------gcctgtctctctctctctctgcctgtctctctct i papAnu2.chr19 C 0 I 892 s chlSab2.chr6 46774050 89 + 50890351 ------------------------TCTCTCTCTCTCTGCCTGTCTCTCTTTCTCTCTGCCTGTCTCTCTCTCTCTCTGCCTGTCTCTCTCTTTCTCTCT-------------GCCTGTCTCTCTCT-------------------- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19572916 126 - 122678785 ----------------TGCCTCACTCTGCATTTCTCTCCCTCCCTCCCAACATCTCTG--TGTCTCTCGTTATTTCTGCTTTTGTGTCCTTTGCATCCTAGTCGGTGGCGCCCCCTGTATCTTCATCCCCGAGCACACCTTTCT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=684.000000 s hg38.chr19_GL949753v2_alt 70879 8 + 796479 ctgcctcc s ponAbe2.chr19 55881662 8 + 60714840 ctctctgc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068148 8 + 51301725 ctgtctct i papAnu2.chr19 I 892 C 0 s canFam3.chr1 19573042 8 - 122678785 CTTGCAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e chlSab2.chr6 46774139 0 + 50890351 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I e panTro4.chr19 59004379 0 + 63644993 C a score=6253.000000 s hg38.chr19_GL949753v2_alt 70887 10 + 796479 ctctctctct s panTro4.chr19 59004379 10 + 63644993 ctttctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881670 10 + 60714840 ctgtctctct i ponAbe2.chr19 C 0 I 226 s papAnu2.chr19 47068156 10 + 51301725 ctctttctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774139 2 + 50890351 --------CT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19573050 10 - 122678785 CTCTGCCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=1205.000000 s hg38.chr19_GL949753v2_alt 70897 2 + 796479 gc s panTro4.chr19 59004389 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47068166 2 + 51301725 gc i papAnu2.chr19 C 0 I 22 s chlSab2.chr6 46774141 2 + 50890351 GC i chlSab2.chr6 C 0 I 4 s canFam3.chr1 19573060 2 - 122678785 GT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e ponAbe2.chr19 55881680 226 + 60714840 I e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=34435.000000 s hg38.chr19_GL949753v2_alt 70899 58 + 796479 ctccctctctctctgcctccctc------tctctctgcctgcctctctctctgcctgcctctct s panTro4.chr19 59004391 58 + 63644993 ctgcctctctctctgcctccctc------tctctctgcctccctctctctctgcctccctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881906 62 + 60714840 ctctctctctctctgcctctctc--tctttctctctgcctgtctctctctctgtctgcctgtct i ponAbe2.chr19 I 226 C 0 s papAnu2.chr19 47068190 56 + 51301725 ctctctctctctctgcctgtctctctctttctctctgcctgtctctctct--------tactct i papAnu2.chr19 I 22 C 0 s chlSab2.chr6 46774147 56 + 50890351 CTCTCTTTCTCTCTGCCTGTCTCTCTCTTTCTCTCTGCCTGTCTCTCTCT--------TCCTCT i chlSab2.chr6 I 4 C 0 s canFam3.chr1 19573062 50 - 122678785 --------GTCCCCGGATGTCCC--CTTGTCTGTCTGCCTGTGGTTCACTGAAA----TTCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e calJac3.chr22 45337790 893 + 49145316 I e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=36988.000000 s hg38.chr19_GL949753v2_alt 70957 42 + 796479 ctctgcctcc-------ctctctttctgcctccctctctctctgcctcc s panTro4.chr19 59004449 42 + 63644993 ctctgcctcc-------ctctctctctgcctccctctctctctgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55881968 36 + 60714840 ctct-------------ttctctctctgcctccctttctctctgcctcc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47068246 42 + 51301725 ctctgcctct-------gtctctttctctttgtctctctctctgcctcg i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 46774203 42 + 50890351 CTCTGCCTCT-------GTCTCTTTCTCTTTGTCTCTCTCTCTGCCTCG i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45338683 49 + 49145316 ctcagcctcccgagtagctTtctctctctctctctttctctctgcttct i calJac3.chr22 I 893 C 0 s canFam3.chr1 19573112 42 - 122678785 TTGTACGTCC-------CTGTTTTAATCTCCCCCGCGCTGTGTGTTTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e nomLeu3.chr10 102644144 0 - 106955855 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=50583.000000 s hg38.chr19_GL949753v2_alt 70999 45 + 796479 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc s panTro4.chr19 59004491 45 + 63644993 -----ctctctctc--------tgcctccc------tttctccttctgcctctttctc--tctctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882004 45 + 60714840 -----ctttctctc--------tgcct--c------tttcttcttctgcctctttctctGTCTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644144 41 - 106955855 -----ctctctctc--------tgcctccc------tttctccttctgcctctt------tctctc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068294 45 + 51301725 -----ctttctgtc--------tgcctctc------tttctccttctgcctctgtctc--tttctc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 46774251 45 + 50890351 -----CTTTCTCTC--------TGCCTCTC------TTTCTCCTTCTGCCTCTGTCTC--TTTCTC i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45338732 33 + 49145316 -----ctctctttc--------c-cccctc------tctctccc-----------ctc--catctc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573154 64 - 122678785 CTACCCTGGATCTCCGAGGCAGTGTCTGCCGTATGGTTTCTTCTGGTGCTTCTGGGTT--TCTCCc i canFam3.chr1 C 0 I 198 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=41042.000000 s hg38.chr19_GL949753v2_alt 71044 30 + 796479 tccccccgcactgtacctctctc----tctctct s panTro4.chr19 59004536 30 + 63644993 tccccccgcactgtacctctctc----tctctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882049 34 + 60714840 TCCCCCCGCACTGTACctctctctctttctctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644185 34 - 106955855 tccccccgcactgtacctctctctctttctctct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068339 30 + 51301725 tctcccctcactctacctctctc----tctcttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774296 30 + 50890351 TCTCCCCTCACTCTACCTCTCTC----TCTCTTT i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45338765 29 + 49145316 cccccccac-ccgtccctccctc----cctctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=2552.000000 s hg38.chr19_GL949753v2_alt 71074 37 + 796479 gctcccctgtctctctctctctgctcccctgtctctc---- s panTro4.chr19 59004566 21 + 63644993 gctcccctgtctctctctctc-------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882083 21 + 60714840 gctcccctgtctctctctctc-------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644219 15 - 106955855 gctccc------gtctcgctc-------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068369 15 + 51301725 ------ctgtctgccccaccc-------------------- i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45338794 25 + 49145316 gtccccgcgactccccccgcc----------------ccac i calJac3.chr22 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e chlSab2.chr6 46774326 17 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=619.000000 s hg38.chr19_GL949753v2_alt 71111 7 + 796479 tctctcc s panTro4.chr19 59004587 1 + 63644993 ------c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882104 1 + 60714840 ------c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644234 1 - 106955855 ------c i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068386 6 + 51301725 tctct-c i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46774343 6 + 50890351 TCTCT-C i chlSab2.chr6 I 17 C 0 e mm10.chr7 3611574 0 + 145441459 C e canFam3.chr1 19573218 198 - 122678785 I e calJac3.chr22 45338819 0 + 49145316 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=20660.000000 s hg38.chr19_GL949753v2_alt 71118 24 + 796479 ccctagtg--------------tctctgtatctgtctt s panTro4.chr19 59004588 24 + 63644993 ccctAGtg--------------tctctgtatctgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882105 24 + 60714840 ccctAGTG--------------TCTCTGTATCTGTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644235 21 - 106955855 ccctagta--------------tctctgtatct---ct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47068392 24 + 51301725 ccccagta--------------tctctgtgtctttctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774349 24 + 50890351 CCCCAGTA--------------TCTCTGTGTCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338819 11 + 49145316 ------------------------actgtatcttt--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573416 37 - 122678785 ccctagtaaagaatcaTCCATTTCTCTGGTTCTCTTT- i canFam3.chr1 I 198 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59928495 2447 + 64156825 I a score=235227.000000 s hg38.chr19_GL949753v2_alt 71142 110 + 796479 ttcttgtgt-----------ctgtgaatct----gtttgcccgcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA s panTro4.chr19 59004612 112 + 63644993 ttcttgtgt-----------ctgtgaatctatcagtttgcccgcctcgctctgtctct-------ttccctatatctctctgtccctCC-CCCAACTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882129 98 + 60714840 TTCTTGTGT-----------CTGTGAATCTATCAGTTTGCCCGCCTCGCTCTGTCTCT---------------------CTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644256 114 - 106955855 gtcttgtgc-----------ctgcgaatctatcagtttgccagcctcgctctgtctctct-----ttccctatatctctctgtccctcC-CCCACCTCCCTTGTTCCACC-----------CACTTCTCCTC----CCCGACCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59930942 110 + 64156825 TTCTTGTGT-----------CTGTGAATCTGTCAGTTTGCCTGCCTCGCTCTCTCTTT---------ACCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i rheMac3.chr19 I 2447 C 0 s papAnu2.chr19 47068416 108 + 51301725 --cttgtgt-----------ctgtgaatcTGTCAGTTTGCCCGCCTCGCTCTCTCTTT---------ACCTGTatctctctgtccctcc-cccacctcccttgTTCCACC-----------CGCTTCTCCTC----CCTGACCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774373 108 + 50890351 --CTTGTGT-----------CTGTGAATCTATCAGTTTGCCTGCCTTGCTCTCTCTTT---------CCCTGTATCTCTCTGTCCCTCC-CCCACCTCCCTTGTTCCACC-----------TGCTTCTCCTC----CCTGACCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338830 114 + 49145316 ctctcGTGT-----------CTGTGAAACTATCAGTTTGCTCGCGTCACTCTGTCTCTCT-----TTCCCTGTATCTCTCTGTCCTTCC-CCCGCCTCCCTTGCTCCACC-----------CGCTTCTCCTG----CACAACCCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19573453 146 - 122678785 CCCTCATGTAGTAATTTTTGCTCTGGGTCATTGTACAAGCCTGTCTCTGTATGTCTTTTTCCGTATCTCCTGTATCTCTCAGTCCCTCCTTCTCCCTCCCTCATCACACCCCAAAGTCCCTCCTTTCCCCTCAGCGCCCCACCTCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3611574 0 + 145441459 C e macFas5.chr19 54942282 1 + 59248254 I a score=1606428.000000 s hg38.chr19_GL949753v2_alt 71252 481 + 796479 GGACCTCACCTGTCACCAGCAGCTCCAGGACATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAAATTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGCCTTGTTAA s panTro4.chr19 59004724 481 + 63644993 GGACCTCACCTGTCACCAGCAGCTCTAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCATCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCTAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTTCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacaactactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882227 481 + 60714840 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTTGGTAGAAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCACCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATTCCGGAAGAGAAGGGGAGCCATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCTGGCTGAGCTCCCAGCCATGGCTTAGGGTGGTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAAAATCaccttggacgattactgcccctttcttagcctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCAAGGCTTGTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644370 481 - 106955855 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCCTTCGGTAGCAGCAGCGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAAGGGGAGCGATCTCTCCAGGCTTGAAAAGTCCAAATCTCCAAGCAGGTTGGGGTGCCCGGCACCTCAAGGTCACGTTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTAGGGTAGTATGAAGCTGGGGGGACTGAATAAACAGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGAAAGGGAAGTTGGGGAAGGAGGAGAATCaccttggacgattactgccccttacttagcctcagtttcgtgtttgt-aaaatcggggagagactggactaCAATCAAGGCTTGTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931052 478 + 64156825 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgt-aaaatcagggagagactggactaCAATCACGGCTTGTTAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47068524 478 + 51301725 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTAGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCAATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCTGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCACCTTGAACGATTACTGCCTCTTTCTCAGTCTCAGTTTCCTGTTTGT-AAAATCAGGGAGAGACTGGACTACAATCACGGTTTGTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774481 479 + 50890351 GGACCTCACCTGTCACCAGCAGCTCCAGGGGATCGCTGGGCTGGGACCAGACACCCGGCCTCCAGTCTGGCCTCCGGTAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGAAAGAATTCTGCCAGCTCGGAGGACACATCCCGGAAGAGAGGGGGACCGATCTCTCCAAGCTTGAAAAGTCCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCAGGGGTCACAACTGTAGCCGGCTGAGCTCCCAGCCATGGCTTGGG---GTATAAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGGCCT------CCTGGGAGCCCCAGAAGATGACAGGGAAGTTGGGGAAGGAGGAAAATCaccttgaacgattactgcctctttctcagtctcagtttcctgtttgtaaaaatcagggagagactggactaCAATCACGGCTTGTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45338944 478 + 49145316 GGACCTCACCTGTCACCAGCAGCTCCAGGGCATCGCTGGGCTGGGACCAGACACCCGGCCCCCAGTCTGGCTTCCCATAGCAGCAGTGGTAACTTCCCCCTTGGGCTGGAGTCACCTCCTCCAGGAAGAACTCCGCCAGCTCCGAGGACACGTCTCGGAGGAGAAGGGGATCGGTCTCTCCAGACTTGAAAAGTGCAAATCTCCAGGCGGGTTGGGGTGCCCGGCACCTCAAGGTCACATTGACCCCGGGGGTCACAACCGAAGCTGGCCGAGCTCCCAGCCATGGCCTGGG---GTATGAAGCTGGGGGGACTGAATAAACGGGGCTGCCTGGGTCCTCGGACCT------CCTGGGAGCCCCAGAAGATGGAAGGGAAGTTGGGGAAAGAGGAAAATCaccctggacggttactacccctttctcagcctcagttccctgttggt-gaaatcagggggagactggacaacagtcaaggCTTGTTAA i calJac3.chr22 C 0 I 569 s mm10.chr7 3611574 443 + 145441459 AGACCTCACCCGTTACCAGCAGTTCCAGAACATTACTGGGCTGAGACCAGACACCTGGCCCCCAGTCTGTCTTGCGGTAGCGGCAGTGATAACTGCCCCCTTGGGCCGGAGTCACTTCTTCCAGGAAGAACTCAGCCAGCTCAACGGACACATCCCGGAGGAGCAGAGGGGTGACAAGGCCACTTTTGAAGAGTGCAAACCGCCAGGCAGATTGAGGTGCGCGGCAAGTCAAGGTCACGTTGATCCCAGGAGTCACAACTGCAGCAGGATGAGCTCCCAGCCATGGCTGGGG---GTATGAGGCTAGGGGCGCTTAATAAAAAAGACTGCTTGGGTCCTTAGGACCCTCCAACCCAGAAGGCCCAGGAGCTTAAGCAGAAGTCGGA-------------CACCATGAA---------CCTCTCTCT-------------------AT-AAAGAAGGGGAGGGCCTGGAATACAATCACAGCCGGCCTA i mm10.chr7 C 0 C 0 s canFam3.chr1 19573599 457 - 122678785 GGACCTCACCTGTCACCAGCAGTTCCAGTGTATCACTGGGGTGGGACCAGATACCCAGGTCCCAGCCAAGACTCCGGTAGCAGCAGTGGTAACTGCCCCCCTGGGCTGGGGTCACCTCCTCCAGGAAGAACTCTGCCAGCTCCATGGACACATCCCGGTACAGCACAGGAGTGATTTCTCCAGACTTGAAGAGTGCAAACCTCCAGGCAAGTTGAGGTGCCTGGCACCTCAAGGTCACGTTGACCCCAGGGGTTACAATTGCAGCAGGCTGAGCCTCCAGCCATGGCTTGGG---GTATAAGGCTGGGGAGACTGAATAAACAGAATT-CCTGGGTCCCTGGGCTT------CCTGG--------------------GCAGGTGGGGTGGGAAGAGAATCacctggggcagtccctgcctctttctcatcctcagttccctgcttat-aaaatagggaaggtgctggacCCCAGTCAAGGATTGTCAA i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=159370.000000 s hg38.chr19_GL949753v2_alt 71733 56 + 796479 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT s panTro4.chr19 59005205 56 + 63644993 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882708 56 + 60714840 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644851 56 - 106955855 AACCAGGTGCAAATCAGTGGGGCAGGAGAGAAACTTCTGAGCTTT----ACTCCACAGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931530 56 + 64156825 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069002 56 + 51301725 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46774960 56 + 50890351 AACCAGGTGCAAATCAGAGGGGCAGGACAGAAACTTCTGAGCTTT----ACTCCACAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45339991 54 + 49145316 aaCCAGGTGCACATC--TGGGGCAGGACAGAAACTTCACAGCTTC----ACTCCACAGTT i calJac3.chr22 I 569 C 0 s mm10.chr7 3612017 56 + 145441459 AACAAGCTGACAATCACTGGAATAGTACTCTTAACTTTGAGCTTT----TCCCCATAGTT i mm10.chr7 C 0 I 3275 s canFam3.chr1 19574056 57 - 122678785 GACTAGCCGCAAATTAGAATAGCAGG---GTCACTCCTGAGCTTTATTGACTCCGTGTTT i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=111562.000000 s hg38.chr19_GL949753v2_alt 71789 65 + 796479 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta s panTro4.chr19 59005261 65 + 63644993 TGTAAACACAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTATTattattattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882764 65 + 60714840 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-tt-----ttattattattattattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644907 65 - 106955855 TGTAAACATAGTTTCAAAAGGTCAGGTCCCAGAACTCTGTAA-TT-----TTATTAttattattattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931586 59 + 64156825 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAATTT-----TTTTtttttttttttttttta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069058 56 + 51301725 TGTAAACACAGT-------AGTCAGGTCCCAGaactctgtaa--------tttttttttttttttttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775016 55 + 50890351 TGTAAACACAGT-------AGTCAGGTCCCAGAACTCTGTAA---------TTTTAttttattttttttta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340045 57 + 49145316 TGTAAACATAGTTTCAAAGTGTCAGGTCTCAGAAGTCTGTCA-TT-----TTATTCCTATTA--------A i calJac3.chr22 C 0 C 0 s canFam3.chr1 19574113 70 - 122678785 TTTAAACATAATGTCAAGGGATTGGGTCCCTGAAATCTGCAA-TTTTAAATTGTTCTTCAGACTATTTGTA i canFam3.chr1 C 0 I 1653 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=119402.000000 s hg38.chr19_GL949753v2_alt 71854 65 + 796479 agtaatgagatgggagggggcggtctccctat----gttgagcaggttggtcttaaactactggcctca s panTro4.chr19 59005326 61 + 63644993 agtaatgagatgggggggg----tctccctat----gttgagcaggttggtcttaaactactggcctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882829 61 + 60714840 agtaatgagatgggggggg----tctccctat----gttgaccaggttggtcttgaactactggcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102644972 61 - 106955855 agtaatgagatgggggggg----tctccctat----gttgactaggttggtcttgaactactggcctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931645 60 + 64156825 agtaatgagatggggatg-----tctccctat----gttgcccaggctggtcttaaactgccagcctca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069114 60 + 51301725 agtaatgagATGGgggtg-----tctccctat----gttgcccaggctggtcttaaactaccagcctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775071 60 + 50890351 agtaatcagatgggggtg-----tctccctat----gtcggccaggctggtcttaaactaccagcctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340102 63 + 49145316 AGTAATGAGATGGgggg------cctatctatattggttggccaggttggtcttcaactactggcctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=192351.000000 s hg38.chr19_GL949753v2_alt 71919 251 + 796479 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacacccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctgtgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcttgggctcaaacagtcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta s panTro4.chr19 59005387 254 + 63644993 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA-------------Ctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacactcctccacctcagcctcctgagtacctgggaccacaggcacatgccgctacaccaggctaattttttttttattttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55882890 265 + 60714840 agcaatcctcccacctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagACttttttttctttctttttttttttt---------tttttttttttttgaggcagggtcttgctctgttgctcaaggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaacaatcctccacctcagcctcctgagtacctgggaccacaggcacatgccactacaccaggctaatttttttttt---tta i ponAbe2.chr19 C 0 I 324 s nomLeu3.chr10 102645033 245 - 106955855 agcaatcctcccagctcggcctcccaaagtgctaagtttacaagcttgtgccaccacgcccagA------------------Cttttctt---------tttttttttttttgaggcagggtcttgctctg-tgctc-aggcaggagtgcagtggcatgttctcaactcactgcagcctcaatctcctgggctcaaatgatcctccacctcagcctcctgagtacctgggaccacaggcacatgtcactacaccaggctaattttttttat---ttt i nomLeu3.chr10 C 0 I 333 s calJac3.chr22 45340165 260 + 49145316 agcagtcctcccaccttggcttctcagagtgctaagattacaacctggtgccgctgcgcccggA-------------CTATTGtttttttaatttattattattatttttttgagacagggtgttgctctgttgctc-aggcaggagtgcagtggtgtgttctcagctcactgcagcctcaacctcctgagttcaaacaatcctctgcctcagcctcctgagttcctgggaccacaggcgcacggtgctacaccaggctgttttttttgtt---act i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=46982.000000 s hg38.chr19_GL949753v2_alt 72170 61 + 796479 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctcg s panTro4.chr19 59005641 61 + 63644993 atttttagtagagacgagcattcgctatattgcccaggctactcttgaactcttgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883479 61 + 60714840 atttttagtagagacgagcattcactatgttgcccaggctactgtcaaactcttgggctca i ponAbe2.chr19 I 324 C 0 s nomLeu3.chr10 102645611 61 - 106955855 atttttagtagagatgagcattcgctatgttgcccaggctactctcgaactcttgggctca i nomLeu3.chr10 I 333 C 0 s calJac3.chr22 45340425 61 + 49145316 atcagtagtagggacaagcatttgctatgttgcccggactagtctcgaacccctgggctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46775131 0 + 50890351 C e papAnu2.chr19 47069174 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59931705 0 + 64156825 C a score=291544.000000 s hg38.chr19_GL949753v2_alt 72231 120 + 796479 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG s panTro4.chr19 59005702 120 + 63644993 agcaatcctcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883540 120 + 60714840 agcaatcctcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATGTTTGCAATATAGTATTTCAAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102645672 120 - 106955855 agcagtcctccccccttggcctcccaaagtgctaggattacaggtgtgagtcaccacgcccagccAGAACTCTAATTTTAAATAGCTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931705 120 + 64156825 agcaatcctctcaccttggcctcccaaagttctgggattacgggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAATTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069174 120 + 51301725 agcaatcctcccaccttggcctcccaaagttctgggattatgggtgtgagccaccacacccagccaaaactctaattttaaataactttccaGAATATTTGCAATATAGTATTTCAAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775131 120 + 50890351 agcaatcctcccaccttggcctcccaaagttctgggattacaggtgtgagccaccacacccagccAGAACTCTAATTTTAAATAACTTTCCAGAATATTTGCAATATAGTATTTCAAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340486 120 + 49145316 agcgatcctcccaccttggcctcccaaagtgctgagcttacagatgtgagccaccacacccagccAGAACTCCAATTTTAAATAGCTTTCCAGAATATATGCTATATAATATTTCAAGAG i calJac3.chr22 C 0 I 300 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467744.000000 s hg38.chr19_GL949753v2_alt 72351 212 + 796479 TTGCCAAAACTTG----ctatttggaa--aagaaaaa--tgttggatccctacctcataccatttcccaaaacaacttccagattaattaaagac---cctgtgtttctttttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttgtatggaagattaattaattt s panTro4.chr19 59005822 213 + 63644993 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcattttttttaaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttctatggaagattaattaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55883660 213 + 60714840 TTGCCAAAACTTG----ctatttggag--aaaaaaaaaatgttggatccctacctcacaccatttcccaaaacaatttccagattaattaaagac---cctgtgtttcatttttttt-aactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaagtcttcttaaaatataaaataaaaagttctatggaagattaattaattt i ponAbe2.chr19 C 0 I 163 s nomLeu3.chr10 102645792 213 - 106955855 TTGCCAAAACTTG----ctatttggaa--aaaaaaaa-aagttggagccctacctcacaccatttcccaaaacaacttccagattaattaaagac---cctgtgtttcatttttttttaactataaaagtattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataaaaagttttatggaagattaattaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59931825 215 + 64156825 TTGCCAAAACTTA----ctatttggaag-aaaaaaaa-atgttggatccctacctcacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaataagaagttctatggaagattaattaattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069294 216 + 51301725 TTGCCAAAACTTa----ctatttggaagaaaaaaaaa-atgttggatcCCTACCTCACATCATTTCCCAAAACAACTTTCAGATTAATTAAAGACCTAcctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttGGGGTAAGGAAggcttcttaaaatataaaataagaagttCTATGGAAGATTAATTAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775251 213 + 50890351 TTGCCAAAACTTA----CTATTTGGAAgaaaaaaaaa-atgttggatccctaccccacaccatttcccaaaacaactttcagattaattaaagacctacctgtgtttcattttttt--aactataaaattattcaaaaaactataggaaaatatatttgtcttggggtaaggaaggcttcttaaaatataaaat---aagttctatggaagattaattaattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45340906 214 + 49145316 TTGCCAAAACTTGTTATCTATTAGGGA--ggaaaaaa-atgttggttccctacctcacaccattcccctaaacaacttccagattaattaaagacctacctgtgtttcattttttt--aattatcagagtattcaaaaaactataggaaaatttctttgtcttggggtagggagggcttcgtaaaatataaaataaaaagttctaTGGAGGATTAATTT---- i calJac3.chr22 I 300 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=1250223.000000 s hg38.chr19_GL949753v2_alt 72563 576 + 796479 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTGTTgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggaattcaaagctgcagtgagctatgatagagccaccgtactccagcccgggtgacacaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt s panTro4.chr19 59006035 576 + 63644993 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGATAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTATAGGAAGGCTGTTgggtccggtggcccacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcttgtagttccagctgtttgggatgctgagtaggagaattacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattgtctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagctcgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcggg-tgagggggctcatgtttgtaatcccaacacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884036 577 + 60714840 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGAGAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCTgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagactagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggtgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcggaggctgcagttagctgagatcatgccactgcactcccgcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgaggctggaggattctctgagcccaggagttcaaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccgtctctaa----aaatgaataaaaataaGggtcgggttgagggggctcatgtttgtaatcccaacacttt i ponAbe2.chr19 I 163 C 0 s nomLeu3.chr10 102646005 576 - 106955855 gaccacttcaaatttcttaagttgtgtatgctgaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGATATCACTTATTCACAAATCACACAAATTAAGAGTACAGGAAGGCCgctgggtccggtggctcacagctgtaatcccagcactttgggaggccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgaccaacatggtaaaatcccatctctactaaaaacagaaaaattagccaggcgtggtagtgctagcctgtagttccagctgtttgggaggctgagtaggagaatcacttgaaccctagagtcagaggctgcagttagctgagatcatgccactgcactccagcctgggcaacagagtgagaactc----------------------------------catGGTGGCATG---------------CACTttgggaggctgacgctggaggattgtctgagcctaggagtttgaagctgcagtgagctatgatagagccactgtactccagcccgggtgacagaatgagaccccatctctaa----aaatgaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccaacacttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932040 567 + 64156825 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtagcttatggctgta-----agcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaactc----------------------------------catGATGACGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgaactatgatagagccacttcacgccagccttggtgacagaattaag---cgtctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47069510 572 + 51301725 GACCACTTCAAATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTGGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAggctgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgagGTGGTGctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccttagaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgagcagcagagtgagaaCTC----------------------------------CATGATGacgtg---------------cactttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaatgagctatgatagagccactgcactccagcctgggtgacagaatgaag---catctttaaaaataaataaataaaaataagggtcAGG-TGAGggggctcatgtttgtaatcccagcacttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46775464 572 + 50890351 gaccacttcaaatttcttaagttgtgtatgctaaaagacaAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATTCACAAATCACAC-----AAGAGTATAGGAAGGCTgccaggtgtggtggcttatggctgtaatcccagcgctttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccagcatggtgaaatcctgtctcaactaaaaacacaaaaattagtcgggtgtggtggtgctagcttgtagtcccagctgtttgggaggctgagcaggagaattgcttgaaccctggaggcggaggttgcagttagccaagatcatgccactgcactgcagcctgggcaacagagtgagaactc----------------------------------catGATGATGTG---------------CACTttgggaggctgaggctggaggattgcctgagcccaggagttcgaagctgcaataagctatgatagagccactgcactccaggctgggtgacagaatgaag---catctttaaaaataaataaataaaaataaGggtcagg-tgagggggctcatgtttgtaatcccagcacttt i chlSab2.chr6 C 0 I 8 s calJac3.chr22 45341120 613 + 49145316 GACCGCTTCAGATTTCTTAAGTTGTGTATGCTAAAAGACAAAACTAGAGGACAAATGACAGTACTGGCAGACATCACTTATCCACAAATCACACAAATTAAGAGTGTAGGAAGGCTGCGGCGCTCAGT-gctcacacctgcaatcccagcactttgggaggccgagatgggtggatcacctgaggtcaggagttcgagaccaccctggccgacatggtgaaatcctatctctaccaaaaatgcaaaacttcgccagttgtggtggtgctagcctgtagtcccacctggttcagaagctgagcaggagaactgcttgaacccaggaggcggaggtt--------tcgtgagcacaccactgctctccaacctgggcaac--agtgagactccacccaccgaaaaaaaaaaaaaaaCCTTAgctaggcatggtggcatgcacctgtaattccaacactttgggagactgagg-tggaggattgtctgagctcaggagtttgaagctgcagtgagctatgatcgtgccactgcattccagcctgggtgacagaatgagaccctgtctctaa----aaaataaaaataataaGAgtcagg-catggtggctcatgcctgtaatcccagcacttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=65577.000000 s hg38.chr19_GL949753v2_alt 73139 36 + 796479 gggaggctgaggcagagggatcacctgaggtcagga s panTro4.chr19 59006611 36 + 63644993 gggaggctgaggcagagggatcacctgaggtcagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884613 36 + 60714840 gggaggctgaggcagagggatcacctgaggtcagga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646581 36 - 106955855 gggaggctgaggcagagggatcacctgaggtccgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932607 36 + 64156825 gggaggccaaggcagagggatcacctgaggtcagga i rheMac3.chr19 C 0 M 82 s papAnu2.chr19 47070082 36 + 51301725 gggaggccaaggcagagggatcacctgaggtcagga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341733 36 + 49145316 gggaggtcaaggcagatggatcacctgaggtcaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=177720.000000 s hg38.chr19_GL949753v2_alt 73175 140 + 796479 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- s panTro4.chr19 59006647 140 + 63644993 gttccagaccagcctgaccaacatggggaaaccctgtctctactaaaaatacaaaaattatccgggcattgtggtgtgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884649 140 + 60714840 gctccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccgggcattgtggtgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgg--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646617 140 - 106955855 gttccagaccagcctgaccaacatggtgaaaccctgtctctactaaaaataaaaaaattatccaggcattgtggtgtgtacctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaactcaggaggtgg--- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47070118 140 + 51301725 gttccagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattatctgggcactgtggtgcatgcctgtagtcccagctactcgggaggctgaggcaggagaatcccttgaacccaggaggtgt--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45341769 143 + 49145316 gtttcagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaactagctagacattgtggtgcgtgcctgtagtcccagctacgcgggaggctgaggcaggagaatcccttgaaccaaggaggcagagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59932643 82 + 64156825 M a score=110055.000000 s hg38.chr19_GL949753v2_alt 73315 91 + 796479 ttgcagtgagccgagattgcaccactgcactccggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaa-------at-aaa s panTro4.chr19 59006787 95 + 63644993 ttgcagtgagccgagattgcaccactgcactctggcctgggcgacagagagaaactggtctcaaaataaataaataaataaataaata---aaat-aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884789 99 + 60714840 ttgcagtgagccgagactgcaccactgcactccggcctgagcgacagagagagactggtctcaaaataaataaataaataaataaataaataaataaaA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646757 79 - 106955855 ttgcagtgagccaagattgcaccactgcactctggcctgggcgacagag----actggtctctaaataagtaaataaata----------------aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932726 89 + 64156825 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----ACTCATCTCaaaataaataaataaaataaaata-----aaat-aaa i rheMac3.chr19 M 82 I 10 s papAnu2.chr19 47070258 89 + 51301725 ttgcagtgagctgagatcgtaccactgcactccaacctgggcgacagag----actcatctcaaaataaataaataaaataaaata-----aaat-aaa i papAnu2.chr19 C 0 I 56 s calJac3.chr22 45341912 91 + 49145316 ttgcagtgagccaagactgtgccattgcactccagcctggacgacagagggagatctgtttcaaaaaaaaaaaaaaaaaaaaaaaa------aGT-AG- i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=92477.000000 s hg38.chr19_GL949753v2_alt 73406 115 + 796479 taGGTAGAGATAGCTATA-GCGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgtttgtttttgaagtggagtcttgcac-tgtcacccaggctggagtgcagt s panTro4.chr19 59006882 111 + 63644993 taGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAAAGAGTTtttgtttgtttgtttgtttgttt----ttgaggtagagtcttgcac-tgtcacccaggctggagtgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55884888 115 + 60714840 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGTTtttgtttgtttgtttgtttgtttgtttttgaggtggagtcttgcac-tgtcacccaggctggagtgcagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646836 107 - 106955855 TAGGTAGAGATAGCTATA-GTGACACTGAAATATCTCCAAGAGAGtttttgtttgtttgtttgttt--------ctgaggtggagtcttgcac-tgtcacccaggctgcagtgcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932825 106 + 64156825 aAGGTAGAAATAGCTATA-GTGACATTGAAATATCTCCAAGAG-Gtttttgtttgtttttttgttt--------ttgagacggagtctcgccc-tgtcgcccaggctggagtgcagt i rheMac3.chr19 I 10 C 0 s calJac3.chr22 45342003 91 + 49145316 TATGTAAATACAGATATGTGTGTGGTTG----------CATGGAATTTTTTTTTTTTT----------------TTGATAAGGAGTTTTACTCTTATTTCCCAGGCTTGAGTGTAAT i calJac3.chr22 C 0 I 1511 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=19761.000000 s hg38.chr19_GL949753v2_alt 73521 30 + 796479 ggcgcgatctcagcttactgcaa---------------------------cctctgc s panTro4.chr19 59006993 30 + 63644993 ggcgcgatctcagcttactgcaa---------------------------cctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885003 30 + 60714840 ggcgtgatctcagcttactgcaa---------------------------cctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102646943 57 - 106955855 ggcacaatctcagcttactgcagggctgggattacctgttttacctcagctctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932931 30 + 64156825 ggcacgatctcggctcactgcaa---------------------------cctccgc i rheMac3.chr19 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e calJac3.chr22 45342094 1511 + 49145316 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=9083.000000 s hg38.chr19_GL949753v2_alt 73551 9 + 796479 ctcctgggt s panTro4.chr19 59007023 9 + 63644993 ctcctgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885033 9 + 60714840 ctcctgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647000 9 - 106955855 ctcctgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932961 9 + 64156825 ctcccaggt i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45343605 9 + 49145316 ctcccgacc i calJac3.chr22 I 1511 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e papAnu2.chr19 47070347 56 + 51301725 I e macFas5.chr19 54942282 1 + 59248254 I a score=280323.000000 s hg38.chr19_GL949753v2_alt 73560 205 + 796479 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg s panTro4.chr19 59007032 205 + 63644993 tcaagcgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacccggctaatttttttttttttttttttttttttttagtagagacggggtttcaccacattagccaggatgatctcgatc---tgaccttgtg--atccgcccgcctctgcctcccaaagtgctgggattacag--acgttggccattgcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885042 204 + 60714840 tcaagtgattctcttgcctcagcctcctgagtagctgggattacaggtgcgtcccaccacacctggctaa-tttttttttttttttttgtaatttttagtagagatggggtttcaccacattagccaggatggtctcgatc---tgaccttgtg--atccgcccacctctgcctcccaaagtgctgggattacag--acgttggccattgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647009 191 - 106955855 tcaagcgattctcttgcttcagcctcctgagtagctgggattacaggtgtgtcccaccacacctggctaatatatttt--------------tttttagtagagacggggtttcaccacgtt--ccaggatggtctccatc---tgacctcgtg--atctgcccgcctctgcctcccaaagtgctgggattacagacacgttggccattgcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59932970 203 + 64156825 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatatccggctaa-ttttttttttttttttttgt-tttttagtagagatggggtttcaccgtgttagccgggatggtcgcgatc---tgacttcatg--atccgcccgcctcggcctcccaaagtgctgggattacag--acatgagctactgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070403 205 + 51301725 tcaagcgattctcctgcctcagcctcctgagtaactgggattacagacgcgtcccaccatgtccggctaatttttttttttttttttttgtatttttagtagagatggggtttcaccgtgttagccgggatggtctcgatc---tgacttcatg--atctgcccacctcggcctcccaaagtgctgggattacag--acatgagctactgtg i papAnu2.chr19 I 56 C 0 s calJac3.chr22 45343614 194 + 49145316 tcaggtgatctgcccgccttggcctccaaagt-gctcggattacaggcgtgagccaccacgcctggccA---------------TGTGtgtagtttcagtagagatggggtttcaccatgttgcccaggctggtctcagactcttgagctcaagccatccacccaccttgtcttcccaaagggctgggattacag--acgtgagccactatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e canFam3.chr1 19574183 1653 - 122678785 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=310651.000000 s hg38.chr19_GL949753v2_alt 73765 193 + 796479 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtgacttgttctaggtcatatggtcacatataaatgaatacgatggtgaaactgaggtcctagcttaggc-- s panTro4.chr19 59007237 193 + 63644993 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgagat-ctcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatatggtcacatataaatgaatacgatagtgaaactgaggtcctagcttaggc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885246 191 + 60714840 cccagccCAaga-tcctatttcttaagccct-gtactgtgtcaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttgccgagaaggaaatggagtcttagcaagctgtggcttgttcaaggtcatgtggt--catataaatgaatacgatggtgaaactgaggtcctagcttaggt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647200 191 - 106955855 cccagccCAaga-tcctatttcttaagccct-gtactgtgccaggctcagggttttgcacatgtgatttgatgaaat-ctcacagcggcccattttacagagaaggaaatgaagtcttagcaagctgtggcttgttcaaggtcatatggt--catatcaatgaatacgatggtaaaactgaggtcctagcttaggc-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933173 171 + 64156825 cccggtcCAaga-tcctatttcttaagccct-gcactgtgccaggctcagggttttgcacatatgatttgataaaat-ttcacagcggcccattttacagagaaggaaatggagtcttagcaagctgtggcttgttcaaagt----------cgtataaatgaatacgatggtgaaactgaggc-------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070608 171 + 51301725 cccggtcCAAGA-TCCTATTTCTTAAGCCCT-GCACTGTGCCAGGCTCAGGGTTTTGCACATGTGATTTGATGAAAT-TTCACAgcggcccattttacagagaaggaaatggagtCTTAGCAAGCTGTGGCTTGTTCAAAGT----------CGTATAAATGAATACGATGGTGAAACTGAGGC-------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45343808 149 + 49145316 -ccggccCAAGA-TCCTGTTTCTTAAGCCCTGGCACAGTGCCAGGCTCAGGGTTTTGTACATGTGATTTTATGAAAT-TTCTCAGTGGCCCATTTTACAGAGAAGGAAATGGAGTCTTGGCACACTGTGGCTTATT--------------------------AATACGATAGTGAAGC-------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19575836 180 - 122678785 ccaagatcaagagtcccatgctctatggact-gagcta-gccaggcTCCTGG-TAtacatgggtgattttattaaatcctcacaatagcctatttcacagagaaggaaactgag---tagcaagtgatgctttgttcaaagt------------tgcaagtgaataatatggtgaaagtggggttctagcttagagat i canFam3.chr1 I 1653 C 0 e mm10.chr7 3612073 3275 + 145441459 I e chlSab2.chr6 46776036 8 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=163610.000000 s hg38.chr19_GL949753v2_alt 73958 58 + 796479 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT s panTro4.chr19 59007430 58 + 63644993 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885437 58 + 60714840 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647391 58 - 106955855 ctctgcctcagaagttcctggtcttcagtactcacctataatgGCCACTAAGGGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933344 58 + 64156825 ctctgcctcagaagttcctgctcttcagtactcACCTATAATGACCACTAAGgggaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070779 58 + 51301725 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTaaggggaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776044 58 + 50890351 CTCTGCCTCAGAAGTTCCTGCTCTTCAGTACTCACCTATAATGACCACTAAGGGGGGT i chlSab2.chr6 I 8 C 0 s calJac3.chr22 45343957 58 + 49145316 CTCTGCCTCTGAAGCGCCTGGCCTTCACTCCTCACCTATAATGGCCACTAAAGGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576016 58 - 122678785 ctttagttccaaagttcatggtctttactactcacctatcctgGTCACTAAagggagt i canFam3.chr1 C 0 C 0 e mm10.chr7 3612073 3275 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=526563.000000 s hg38.chr19_GL949753v2_alt 74016 185 + 796479 --------GAGAAAA----GAAGGA--------------------AGGAATGGA-------------------------GGGAGGGAGGAAAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG s panTro4.chr19 59007488 185 + 63644993 --------Gagaaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaaataagaaTATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAAT----TGGAAAAGGGGTGTCAGCAACA-AAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGGAGGTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885495 190 + 60714840 --------Gagaaaagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACGTAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGATGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647449 190 - 106955855 --------GAgaagagaaggaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGATATCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCAACATAAAGGAGAGTGGATGGGGTGG-CTACTCACCAGACGGAGTGATGTCTGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933402 190 + 64156825 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggaCTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47070837 190 + 51301725 --------gagaaaagaaggaagga--------------------atggaggga-------------------------gggagggaggaaaataaggacttctgggatgggaTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776102 210 + 50890351 --------GagaaaagaaggaaggaaggaaggaaggaaTggagggagggaggga-------------------------gggagggaggAAAATAAGGACTTCTGGGATGGGATTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAAAGGGGTGTCAGCGACATAAAGGAGAGTGGATGGGGCAG-CTACTCACCAGATGGAGTAATGTCCGTGTGACACAGAGGCCCTGTAGAAGGTTGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344015 190 + 49145316 --------Gaggaaa----gaagga--------------------aggaatgga-------------------------gggagggaggaaAATAAGGACATCGGGGATGGGATTGGGCACCACAATAAAATCTGAGTCGTTTTATGGAAAAGCAGTGTCAGCGACATGAAGGAGAGCGGAAGGGGTGG-CTACTCACCAGGTGGAGTGCTGTCCGTGTGACACAGAGGCCCTGTAGAAGGGGGAGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3615348 185 + 145441459 --------gaggaag----ggatgg--------------------aaggagaga-------------------------ggaagagaggggaatgagggaATCTGGGGTGAAGCTAGGCACAAAGATAAAA--TGAGTTGT----TGGAGGCGAGGTGTGAGCAGCATAGCATAGAGCAGGTGGAGTCTCCCACTCACCTGTTGGTGTGAAGTCAGCACGGCATGCAGGCCCTGCAGAAGGTGAAGAG i mm10.chr7 I 3275 I 4 s canFam3.chr1 19576074 186 - 122678785 aagatgagaaggaaagaaagggggg--------------------agaaagggaagaaaagatgtaagaagagaggagcgggagggagggaAATCTGGAAATCTGGGGTGAGCTTGGGCACCAAAATAAAATCTGAGTAGT----TGGAAATGGGCTGTCAGTGGCTTACAGCTGAATGGCTGGGGGATATTACTCACCAGTTGGAGTGA-------------------------------------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 54942282 1 + 59248254 I a score=52770.000000 s hg38.chr19_GL949753v2_alt 74201 36 + 796479 ACTAGtttc--------tttttcctttttttttttt-tgtctgag s panTro4.chr19 59007673 35 + 63644993 ACTAGtttc--------tttttcctttttttttttt--gtctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885685 27 + 60714840 ACTAGtttc----------------ttttttttttt--gtctaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647639 37 - 106955855 ACTAGttcc--------tttttttttttttttttttttgtctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933592 34 + 64156825 ACTAGTTCC---------tttttttttttttttttt--gtctgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071027 39 + 51301725 actagttcc----ttttttttttttttttttttttt--gtctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776312 32 + 50890351 ACTAGTTCC-----------tttttttttttttttt--gtctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344205 43 + 49145316 GCTAGTTCCTTCCttttttttttttttttttttttt--gtctgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576260 8 - 122678785 -----------------------------------T--GTCTGAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=355346.000000 s hg38.chr19_GL949753v2_alt 74237 158 + 796479 gcagactctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt s panTro4.chr19 59007708 158 + 63644993 gcagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctccgtagtagctgggactacaagtgcccgccaccacaccaggctaatctttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885712 158 + 60714840 acagagtctcactctgtcgcccaggctggagtgtagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattcccctgcctcagcctccgtagtagctgtgactacaagtgcccaccaccacaccaggctaatctttgtatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647676 158 - 106955855 acagagtctcactctgtcgcccaggctggcgtgtagtggtgtgatctcagctcaatgcaacctctgcctcccaggttcaagtgattctcttgccttagcctccatcatagctgggattacaagtgcccgccaccacaccgggctaattttggtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59933626 158 + 64156825 acagagtcttgctctgttgctcaggctggagtgtagtggtgcgatctcagctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071066 158 + 51301725 acagagtcttgctctgttgcccaggctggagtgtagtggtgtgatctcagctcattgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccaggactacaggtgcccgccaccacactaggctaatttttgtatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776344 158 + 50890351 acagagtcttgctctgccgcccaggctggagtatagtggtgtgatcccagctcactgcaacttctgcctcccaggttcaagcgattcttctgcctcagcctccctagtagccgggactacagatgcccgccaccacaccagactaatttttgtatttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344248 158 + 49145316 aaggagtctcattctgtctcccaggctagaatgcaatggctcgatcttggctcactgcaacctctgcctcctgggttcaagtgattttcctgcctcaaccccccaagtagctgggactacaggtgcctgccaccacacccagctaatttttgtatttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576268 0 - 122678785 C e macFas5.chr19 54942282 1 + 59248254 I a score=220726.000000 s hg38.chr19_GL949753v2_alt 74395 113 + 796479 tagtagaga-ggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccacccgcc-tcgg-cctcccaaagtgctgggcctcggctcccacaggcatgag s panTro4.chr19 59007866 105 + 63644993 tagtagaga-ggggttttgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgacccgcccgcc-tcgg-cctcccaaagtgctgggatt--------acaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885870 106 + 60714840 tagtagagatggggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatccgcctgcc-tctg-cctcccaaagtgctgggatt--------acaggcatgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102647834 106 - 106955855 tagtagagatggggtttcgccatgttggtcaggctgatcttgaaatcctgacc-tcaggtgatccgcccgcc-tcgg-cctcccaaagtgccgggatt--------acaggcgtgag i nomLeu3.chr10 C 0 M 2603 s rheMac3.chr19 59933784 106 + 64156825 tagtagagacagagttttgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtaatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggtgtgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071224 106 + 51301725 tagtagagacagggtttcgccatgttggtcaggctgttcttgaactcctgtcc-tcaggtgatccgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776502 106 + 50890351 tagtagagacagggtttcgccatgttggtcaggctggtcttgaactcctgtcc-tcaggtgatctgcccgcc-tcag-cctcccaaagtgctgggatt--------acaggcgtgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344406 108 + 49145316 tagtagagccagggtttcgccatattggtcaggctggtcttgaactcctggcctttgggtgatccaccccccttcag-cctcccaaagtgcagggatt--------acaggcgtgag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19576268 58 - 122678785 ----TGACACAGAG----GCCCTGTAGATCA---------------------C-GGAGGGG----------C-TAAGTCTTTTCAAAGTTCTAGGCTT--------C---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e macFas5.chr19 54942282 1 + 59248254 I a score=30122.000000 s hg38.chr19_GL949753v2_alt 74508 21 + 796479 ccgctgcgcccAACAGCGAGT s panTro4.chr19 59007971 21 + 63644993 ccactgtgcccgacAGCGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885976 21 + 60714840 ccactgtgcccgacAGCGAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933890 21 + 64156825 ccactgtgcctgacAGCGAGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071330 21 + 51301725 ccactgtgcccgacagCGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776608 21 + 50890351 ccactgtgcccAACAGCGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344514 20 + 49145316 ccaccCAGCC-GGCAACTAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3615533 4 + 145441459 I e canFam3.chr1 19576326 0 - 122678785 C e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=1172918.000000 s hg38.chr19_GL949753v2_alt 74529 623 + 796479 TCTTTTCAAAACCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCCCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCAACCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATGAT------CGTAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATAAGAATCTGGGAGTCCTCCCTGTCTCCTGACCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGCCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGT-- s panTro4.chr19 59007992 623 + 63644993 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAACCCAGGAATCTGAGTTCTCAGCTCCTATCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTTGGACATCCATTGCCCACCTACCGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CGGAGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGGGAATCTGGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAACCAGAGATACCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTGTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAACC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGC--CTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAAAAGAAAGGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55885997 631 + 60714840 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCATT--GGTAGCCCAGGAATCTGAGTCCCCAGCTCCTATCTCCCCTGGGAAATGAAAATCTTATCCCTCCCTCCTCCTGTCTCAGTAGGCAGAAATTCAGACATCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAAGCCCTTGAACTCCACC-TTTCCAGGGAACAATAAT------CG-AGAGTTTCTCCTCTCACGAGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCTCAGGGAATCAGGAGTCCTGGCTTCCATCCCCTTCCCACATGACAATCTAGGAGTCCTCCCTGTCTCCTGCCCTCTTCCTGCCTCAAGAGCTAGAGAGACCTGTCCCCACCTCCTTCCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCTCTTGCTTTAGGACCCAGGGGTCTAGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAATC---------TGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTGCCTCTCTCTCTCTGCCCCCAACCCCAGCCAGGAACCCAGGGAGAAGAAAGGGGC-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59933911 623 + 64156825 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCCTGTCTCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCC--TTCCCAGGGAATCAGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGCGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGAGAC-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTAGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCACCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071351 625 + 51301725 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCCCAGCTCCTCTCTCCTCTGGGAAATGAGAATcttatccctccctcctcctgtctCCGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCGGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCtcctctcctgggttcaggaaTCTGGGTCCCCATTTCCGTCTTCTCTCAGGAGCTAAGAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCAAGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCTTCAAGATCCAGAGATACCTGTCCCCG-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGGCCCTAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGggtctccattctctctctctttctgccccccaccccatcccggaacccagggagaaggaaggggc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46776629 625 + 50890351 TCCTTTCAAAGCCCTTTGTGGCCAGCCCCATCTCACT--GGTAGCCCCAGAATCTGAGTCCTCAGCTTCTCTCTCCTCTGGGAAATGAGAATCTTATCCCTCCCTCCTCTTGTCTCAGTAGACAGAAATTCGGACTTCCATTGCCCACCTACTGAA-------GAAGTCTGAACGCAGACCCCTCTGGCCTGGGCACCCAAGAGTTCAGGCCCTTGAACTCCACC-TTTCCAGGGGGC---------------AGAGCTTCTCCTCTCCTGGGTTCAGGAATCTGGGTCCCCATTTCCCTCTTCTTTCAGGAGCTAAAAGCCCTGTTCCCAGCCCCCTTTTCCCAGGGAATCGGGAGTCCTGGCTTCCATCCCCCTCCCATATGAGAATCTAGGAGTCCTCCCTGTCCCCTATCCTCTTCCTGCCTCAAGATCCAGAGATATCTGTCCCCA-------CCTCCTTCCTCTTTCGGGAA-------------TCTGTGTTCCCTTGCTTTAGGACCCAGGGGTCTGGACCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCCCAAAGCTCCAGCTAGTGCTGCCTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATTCTCTCTCTCTTTCTGCCCCCCATCCCATCCAGGAACCCAGGGAGAAGGAAGGGGC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45344534 627 + 49145316 TCCTTTCAAAGCCTTTTCTGGCCAGCCCCATCTCATT--GGTATCCCAGGAATCTGAGTCCCCCACTCCTCTCTCCTATGGGAAACAAGAATCTTATACCTCCCTCGTTCTGTCTC---AGGCAGAAATGCAAACTCCCATTACCCAGCAACTGAA-------AACGTCTGAACCCAGACCCCTCTGGCCTGGGAACCCAAGAGTTCAGGCCCTTGAACTCCCCC-TTTTCAGGAGACAGTGAT------CGAAGAGTTTCTCCTCTCCTG-GTTCAGGAATCTGAGTCTCCATTTCCCTGTTCTCTCAGGAGCTACGAGCTCTGTTCCCAGCCCCCTTTCACCAGGGAATTAGGAGTCCTGGCTTCCATCCCCATCCCGTGTGAGATTCTAGAAGTCCTCCCTGTCCGCTACCCTCTTCCTGCCTCAGGATCCAGAGAGACCTGTCCCCA-------TCTCCTTCCTCTTACGGGAA-------------TCTGTCTTCTCTTACTTTAGGACCCAGGGGTCTGGGCCCCAGTCCTG-TTCTTTATTTGAACCTAGAATCTCAAGCCCCCAGCTCGTGCTG-CTGG-------------------------------------------------TCCCCCTG--CAGGGTGTCTGGGTCTCCATCGC--CTCTCTCTCTGCCCCCCACCCCAGCCAGGAACTCAGGGAGGAGGAAGGGGC-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3615537 496 + 145441459 TTTTTACAAAGCCCTTTGTGGACTACCGTCTCCCCTCTAAGGAGCCCTAGACTCTGATT-------------------------ACATGAAGCCTGCCACCGTCTTTTTTAGGATC---AAGCAAAACTCTGTACTTCCATTCCCCA--TACTTAA-------GAAG---------------CTGCTGTCTG---ACCCAAGAGGACAGGCCTCTGTTCCCCACC-TTTCCTAAGAACAATACTTTGCTCCTTGGGGTTTCTCTGCCTTGGGGTTTGAAGGTTTAGATGCCC--------CCTCCCTCCAGCAC-AGTAGACTTG---------CCCATTTACCATGAGAACTGAAT---------------------------ACATTCTTTGACCCCTAGATATCCCTTACTCTCCT-CTGCCTGGAGATCCAGAGAAACCTATGCTCA-------CCCCCGACC-----CAGCAA-------------TCTGTCTTCCCCCG-TTTAGGACTCAGGTATCTGGGTACCAGTCCTGATTCCTTTTTCTAAATTGGA-------------------TGTTGAAT---------------------------------------------------TCCATATG--AACAG--------------------------ATATAGCCCTCAGCCCAGCCAAGGATCCACACACAGGGGAGGGAC-- i mm10.chr7 I 4 C 0 s canFam3.chr1 19576326 597 - 122678785 TC-------------------CCAGCTTCACCTCACT--GCAAACCCAGGAATCTAAATC------------TTCCTCTGGGAAACAGGAATCTTACCCATATGTCCTCTT---TCAGTAGCCAGAACTGCAGGCTCTTAATCCCTGCCTACTTCATTAGTCTGAAGTCTGGCCCCAGCCCCCTCTTGCCTCTACACCC-AGTGTCCAGACCCCTGGACTCCACCTTTTCCAGGAGACAGTAATCTGAGCCC-ACAGTGTCTCCTCTCTGGGGTCCAGGAGTCTGGGTCCCCAGCTCCCTTCT------------------------------------TTCCCAGAGACCCAGGTCTTCTGGCTTCC-TCTTCTTCCCACATCAGAGTCTAGGATTC------------TACATTTGTCAT---------TCCCAAGAGTTCAGTCCTTA-----------------------GGAAGGAATTCAAGACCTCTGTGTTCTCCTGTGTTAGGACCCAAGGATCTGGGTCCT-GTCCCC-TTAT---TCTGGGTCTAGAATTCTGAACCCTCAGCTAGTGCTGTCTGACCATCCCGCACCTACCCTCAGAGGGACTCAGTAGCCCTCTTCCGTTCCCTCTCCCTGCTCAGAGTGTCCAGGTCCCCAGAGC--CTGTCTCTCTGCACCCAAG-CCAGCCTGGGACCCAGGGAGAAGGGGGAGGGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102647940 2603 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=807362.000000 s hg38.chr19_GL949753v2_alt 75152 271 + 796479 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCATTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCACTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTTATTTAACTCTAGAAACAAA s panTro4.chr19 59008615 258 + 63644993 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGACACCCGCTAG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAACCAGACCCAGATC-----CTCGTTTACGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCA-------------CTGTGGAAAAA-TTAGCAGGGGGTTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886628 277 + 60714840 GACTCACAGAGGGTCAGCAGCTGGAGGATCAGTACCAGGGCCATGGTGGGCAAATGTTCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTCCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGACCAGATACTCGTTTAGGGAAGAGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGTCCTGTGGCACTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650544 272 - 106955855 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCATCAAGGCCATGGTGGGCAGCTATCCGCTGG------AGCTGGAGCCAGGGCTTGGTCGCACCCTCTTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGATA-----CTCGTTTAGGGAAGTGAGTATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATGGCCCTGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTCATTTAACTCTAGAAACAAA i nomLeu3.chr10 M 2603 C 0 s rheMac3.chr19 59934534 272 + 64156825 AGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTCGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47071976 272 + 51301725 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAGTCAGGGCTTGGTTgcatcctctcccctcccaggaaatgaggaaacatcagaaagCCAGACCCAGATG-----GTCGTTTAGGGAAGAGGGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGCGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777254 272 + 50890351 GGCTCACAGAGGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTAGGCAGATATCTGCTGG------AGCTGGAATCAGGGCTTGGTTGCATCCTCTCCCCTCCCAGGAAATGAGGAAACATCAGAAAGCCAGACCCAGATC-----GTTGTTTAGGGAAGAGAGGATCGAGGTGGGGGCCTGTGGGTGACTGTGTCATAGCCCTATAGTGCTGTGGAAAAGGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAACTCTAGAAACAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345161 262 + 49145316 AGCTCACAGACGGTCAGCAGCTGGAGGATCAGCACCAGGGCCATGGTGGGCAGATATCC-CTGC------AGCTGCTGCCAGAGCTTGGCTG-------TTCCCTCCCAGGAAATGAGGCAACATCAGAAAGCCAGACCCAGAGC-----CCAGTTTAGGAAAGAGA--AGCGAGGTGGGGGCCTATGGGTCACTGTGTCATAGCCCCATGGCACCGTGGAAAAAGTTAGCAGGGGGGTCAGTCATAACCTGTGGTGTTCATTAATTTAGCTCTAGAAACAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3616033 255 + 145441459 AGCTCACAGAGAGTCGACAGCTGGAGTATCAGCGACAGGACCATGGTGGGCA-CTCTCCG-TGG------AGCTGAGGAAAAGG-TTGACCCTGCCTTTTTCACTCTGAGGAAATGAAGCAACACCAGAAAGCCATG-TGAGAGT-----CCTGTTTAGGGAACAGAGGAGTCAGGTGGAGGCTCCTGGGTAACTGTGTCATAGTTTCATTG--TCTTGGAAAAAGTTGCAAGATGGAACAGTCATAGCCTCTGGTGTTCTTTAATTTAACT----------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19576923 269 - 122678785 GGCTCACAGAGGATCAGCAGCTCAAGGATCAGCGCCAGAGCCATGGTGGTCAGATCTTGGCTGGAGCAGAAGCAGGAGCCAGGGCTCAGCCGTGCCCTCTCACTTCTCAGGAAAT---GCAATACCAGAAAGCCAGA------GC-----TCTGTTTAAGGAAGGGAGGAGGGAAGTGGGGGCCTCTGGGTGACTGTGTCACAGCCCCATGGTGCTGTGGAAAAGCCTGGGAGATGGGGCAGTCATAACCAGTTGTGTTCACTAATTAAACTTAAAAAAAAAA i canFam3.chr1 C 0 I 167 e macFas5.chr19 54942282 1 + 59248254 I a score=142386.000000 s hg38.chr19_GL949753v2_alt 75423 75 + 796479 TActagtcaggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacagagcgaga s panTro4.chr19 59008873 75 + 63644993 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886905 75 + 60714840 TActagtcggaaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaaaagcagcctgggcaacacagcgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650816 75 - 106955855 TACTAGtcgggaggtggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcctgggcaacacagcaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934806 67 + 64156825 TActagtcgggaggcggaggcaggagta-----tcgcttgagcccaagagt-----tcaagagcaggttgg--------gcggga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072248 67 + 51301725 TACTagtcaggaggcggaggcaggagga-----tcgcttgagcccaagagt-----tcaagagcagcttgg--------gcgaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777526 67 + 50890351 TActagtcgggaggcggaggcaggagga-----tcgcttgagccccagagt-----tcaagagcagcttgg--------gcgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345423 60 + 49145316 TACTCAttgggaggtggagatgggagga-----tcgcttgagtccaggagt-----tcaa---------------catggcgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3616288 82 + 145441459 TAAAAGTTGG--GGAGGAGGGCTGAGGACGTTGTCGC-TAAGTAGAAGACCACTTGCCCAGAGTAGCCTCAGCACTGaggagaga i mm10.chr7 C 0 I 915 e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=23730.000000 s hg38.chr19_GL949753v2_alt 75498 10 + 796479 ccctgtct-aa s panTro4.chr19 59008948 10 + 63644993 ccctgtct-aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886980 10 + 60714840 ccctgtct-aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650891 11 - 106955855 ccctgtctaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934873 10 + 64156825 ccctgtct-aa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072315 10 + 51301725 ccctgtct-aa i papAnu2.chr19 C 0 M 348 s chlSab2.chr6 46777593 10 + 50890351 ccctgtct-aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345483 10 + 49145316 ccctgtct-aa i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=151803.000000 s hg38.chr19_GL949753v2_alt 75508 101 + 796479 aaaataaataaat----tgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----atagatagacagatagaaagataTCTGTC-----TGTTTTAA s panTro4.chr19 59008958 105 + 63644993 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGACAGAAAGATATC-----TGTTTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55886990 110 + 60714840 aaaataaataaataaattgtgccactgcactccagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGATAGAAAGATATCTGTCTTGTTTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102650902 106 - 106955855 aaaataaataaataaattgtgccactgcactctagcctgggtgatagagtgagaccatgtctttaaaT----ATAGATAGACAGACAGAAAGATATCTGTC----TTGTTTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59934883 99 + 64156825 aaaataaataaat----tttgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaaT----ACAGACAGACAGACAGAAAGATATCTGTT-------TTTTAA i rheMac3.chr19 C 0 I 31 s chlSab2.chr6 46777603 103 + 50890351 aaaataaataaat----tgtgccaccacactccagcctgggtgatagagtgagaccatgtcttcaaatacagacagacagacagacagaaagaTATCTGTT-------TTTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345493 99 + 49145316 --aaaaaaaaaaT----TGTGCAACATCGCTCCAGCCTGAGTGATAGAGTGAGACCATGTCTTTAAAT----ATAGACAGACAGACAGAAAGATATCTGTC-----TGTTTTAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e papAnu2.chr19 47072325 348 + 51301725 M e macFas5.chr19 54942282 1 + 59248254 I a score=189487.000000 s hg38.chr19_GL949753v2_alt 75609 101 + 796479 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTCATTGATTGACAGATAGataaaaa-------tttgcacctattatgtgccaggcccttgctgTGATTGAAaga s panTro4.chr19 59009063 101 + 63644993 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGtcattgattgacagatagataaaaa-------ttcgcacctattatgtgccaggcccttgctgTGATTGAAaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887100 101 + 60714840 AAATAAGAACCTATTATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTGATTGAAaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651008 101 - 106955855 AAATAAGAACCGAATATGTGCCAGACTCTTGCTGTGATTGATTGACAGATAGataaaaa-------ttagcacctattatgtgccaggcccttgctgTgatagataga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935013 97 + 64156825 AAAAAAGAACCTATTATGTGCCAGACTCTTGCTG----TGATTGATTGATAGAAAAAAA-------TTAGCACCTATTATGTGCCAGACCCTTGCTGTGATTGAAAGA i rheMac3.chr19 I 31 I 249 s papAnu2.chr19 47072673 97 + 51301725 aaattagcatctattatgtgccaggcctttgcta----tgatagatagatagataaaaa-------ttaGCACCTGTTAAGTGCCAGGCCCTTGCtgtgattgattga i papAnu2.chr19 M 348 C 0 s chlSab2.chr6 46777706 99 + 50890351 -----AAAACCTATTATGTGCCAGACCCTTGCTG----TGATTGAAAGAAAAAAAGAaaaaaaaatttagcatctattatgtgccaggcccttgctgTgataaataga i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45345592 93 + 49145316 AAATAAGAACCTATAATATGCCAGACTATTGCTG----TGattgattgat----aaaaa-------ttagcacctatcatgtgccaggcccttgctgTgattgataga i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=-595.000000 s hg38.chr19_GL949753v2_alt 75710 34 + 796479 tagatagatggatg--------------------------------gatggatagatagatagata s panTro4.chr19 59009164 34 + 63644993 tagatagatggata--------------------------------gatagatagatagatagata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887201 18 + 60714840 ta------------------------------------------------gatagatagatagata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651109 22 - 106955855 tagata--------------------------------------------gataggtagatagata i nomLeu3.chr10 C 0 I 36 s papAnu2.chr19 47072770 6 + 51301725 ------------------------------------------------------------tagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777812 66 + 50890351 tagatagataAAAATTagcatctattatgtgccaggcccttgctgTGATAGATAGACAGATAGATA i chlSab2.chr6 I 7 I 36 s calJac3.chr22 45345685 5 + 49145316 ------------------------------------------------------------tagat- i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935110 249 + 64156825 I a score=346188.000000 s hg38.chr19_GL949753v2_alt 75744 245 + 796479 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA-TTATGTGCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTAGCACCTATTATGTGCCAGGCTCTTGGTGTGATACTGTG----------------Ttagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT s panTro4.chr19 59009198 237 + 63644993 gatagatagatagataAAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGATGGAT------------A--------------------------------------------GATTAAAATTAACACCAA-TTATGTTCCAGGCCCTTGCTGtgattaattgatcgattgatagattggttgaCAG--AGAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTg------------------------atagatagatagatagatagatagatagatagat-aAAAATTAGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887219 250 + 60714840 gatagatagatagataAAAATTagcacctattaagtgccaggcccttgctgTGATTGATTGATGGAT------------A--------------------------------------------GATAAAAATTAACACCAA------------GCCCTTGCTGTGATTAATTGATCAATTGATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgtgatactgTgattgattgatagatagatagatagatagatagatagatagatagatagatagatagat-aAAAATTAGCACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102651167 265 - 106955855 GATAGATAGATAGATAAAAATTAGCACCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGATAGAT------------AAGAATTAGCACCTATTAAGTGTCAGACCCTTGCTGTGATTGATGGATAGATAAAAACACCAA-TTATGTGCCAGTCCCTTGCTGTAattaattgatcgattgatagattggttgaCAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGATTGATTGAT-AAAAAGTAGCACCT i nomLeu3.chr10 I 36 C 0 s rheMac3.chr19 59935359 212 + 64156825 GATAGATAGATAGATAAAAATTAGCACCTGTTAAGTGCCAGGCCCTTG-TGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ataaaaattagcacctattatgtgccaggctcttgctgTGATACTGtg----------------------------------------attgattgattgattgat-tAAAATTAGCACCT i rheMac3.chr19 I 249 C 0 s papAnu2.chr19 47072776 144 + 51301725 -----------------aaATTAACACCAATTACGTGCCAGGCCCTTGCTGTGATTAATTGATCGATAGATTGGTTGACA--------------------------------------------GATAAAAAttagcaccta-ttatgtgccaggctcttGCTGTGATActgtgatt------------------------------------------------------------------------------------------------------------------gattgattgattgat-taaaaTTAGCACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46777914 213 + 50890351 GATAGATAGATAGATACAAATTAGCACCTGTTAAGTGCCAGGCCCTTGCTGTGATTGATTGAT----------------A--------------------------------------------GATAAAAATTAACACCAA-TTACGTGCCAGGCCCTTGCTGTGATTAATTGATC----GATAGATTGGTTGACAG--ATAAAAATTagcacctattatgtgccaggctcttgctgTGATACTGTG----------------------------------------ATTGATTGattgattgat-taaaattagcacct i chlSab2.chr6 I 36 C 0 s calJac3.chr22 45345690 231 + 49145316 gatagataaatagataAAAATTAGTGCCTATTAAGTGCCAGGCCCTTGCTGTGATTGATTGAC----------------A--------------------------------------------GATAAAAATGAGCACCAATTTATGTGGCAGGC-CTTGTTGTGATTGATTGATCGATTGATAAAATGATTGACAGGCATAAAAATTAGCACCTATTATGTACCAGGCCCTTGCTGTGATACTGTG----------------------------ATAGATAGATGGAT-GATTGATTGATAGATAAAAAATTCGCACCT i calJac3.chr22 C 0 I 71 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e macFas5.chr19 54942282 1 + 59248254 I a score=467916.000000 s hg38.chr19_GL949753v2_alt 75989 279 + 796479 CTAggccgggcgcggttgttcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgagatcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaa-agaaaaattagccggctgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcgacagagctagact s panTro4.chr19 59009435 280 + 63644993 CTAggccgggcgcggttgctcacgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaacccccgtctctcctaaaaacagaaaaattagtcgggtgtggaggcgcgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaactcgggagtcagaggttgctgtgagccgagatcgcgccattgcacttcagcctgggcgacagagctagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887469 279 + 60714840 ATAggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttccagaccagcctgaccaacgtggagaaa-ccccgtctctactaaacatagaaaaattagccgggtgtggaggcgcgcacctgtaatcccagcgattcaggaggctgaggcaggagaatcgcttgaacccgggagttggaggttgctgtaagccgagataacaccattgcactccagcctgggggacagagctagact i ponAbe2.chr19 C 0 I 25 s nomLeu3.chr10 102651432 279 - 106955855 ATAggccgggcacggtggctcacgcctgtaatcctagcactttgggaggccgaggggggcggatcacctgaggtcgggaagttcgagaccagcctgaccaacatggagaaa-ccccatctctactaaaaatagaaaaattagctgggtgtggaggcacgcgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcaacagagctagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935571 269 + 64156825 ATAggccgggctcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgagggcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtgtaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgtgccagtgcactccagcctgggggact---------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47072920 267 + 51301725 ATAGgccggg--cggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggaagttggagaccagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgctgtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778127 269 + 50890351 ataggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggattacctgaggtagggaagttggagactagcctgaccaacatggagaaa-ccccgtctttactaaaaatagaaaaattagcctggtgtggaggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggaggcggaggttgcagtgagccgagatcgcgccagtgcactccagcctgggcgact---------- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=25798.000000 s hg38.chr19_GL949753v2_alt 76268 21 + 796479 caatctcagaagaaaaaaaaa s panTro4.chr19 59009715 21 + 63644993 caatctcagaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102651711 21 - 106955855 cagtctcaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 M 520 s rheMac3.chr19 59935840 21 + 64156825 cagtctcaggaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073187 21 + 51301725 cagtctcagaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778396 21 + 50890351 cagtctcagaaagaaaaaaaa i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=93320.000000 s hg38.chr19_GL949753v2_alt 76289 112 + 796479 aa-----aaTTAGAACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga s panTro4.chr19 59009736 117 + 63644993 aagaaaaaaTTAGCACCTATTACGTGCCAGACCCTCGCtgtgccatgttggcaggcacagagggaactcagactccgttactgctctcaagcagcagctaccagtccgactgaaaga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59935861 112 + 64156825 -----aaGATTagcacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggcactcagactccattactgctctcaagcagctgctaccagtccgactgacaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073208 111 + 51301725 -----aagattagcaccTATTACGTGGCAGACCCTCGCTGTGCGATGTTGGCAGGCACAGAGGGAACTCAGACT-CGTTACTGCTCTCAAGCAGCTGCTACCAGTCCGACTGACAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778417 112 + 50890351 -----aagattaggacctattacgtggcagaccctcgctgtgcgatgttggcaggcacagagggaactcagactccgttactgctctcaagcagctgctaccagtccgactgacaga i chlSab2.chr6 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e macFas5.chr19 54942282 1 + 59248254 I a score=4927.000000 s hg38.chr19_GL949753v2_alt 76401 57 + 796479 ccaagaccaggtcagtttcctttttttttgagacggagtctcgctctgtcgcccagg s panTro4.chr19 59009853 56 + 63644993 ccaagaccaggtcagtttc-tttttttttgagacggagtctcgctctgtcgcccagg i panTro4.chr19 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e nomLeu3.chr10 102651732 520 - 106955855 M e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=68100.000000 s hg38.chr19_GL949753v2_alt 76458 252 + 796479 ctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc s panTro4.chr19 59009909 252 + 63644993 ctggagtgcagtggtgtgatctctgctcactgcaagctccgcctccggggttcacgccattctcctgccttagcctccccagtagctgggactacgggcgcccaccaccacgcccggctaatttgtgttgtatttttaagtagagacagggtttcaccatgttagccaggatggtctagatctcctgatctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652253 252 - 106955855 ctggagtgcagtggtgtgatctctgctcactgcaagctccgccttccgggttcacgccattctcctgcctcagcctccccagtagctgggactacagtcgcccaccaccactcccggctaatttgtgttgtatttgtaagtacagacagggtttcaccatgttagccaggatggtctagatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacggctccc i nomLeu3.chr10 M 520 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45345921 71 + 49145316 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=807.000000 s hg38.chr19_GL949753v2_alt 76710 2 + 796479 gg s panTro4.chr19 59010161 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652505 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45345992 2 + 49145316 ga i calJac3.chr22 I 71 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e chlSab2.chr6 46778529 0 + 50890351 C e papAnu2.chr19 47073319 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59935973 0 + 64156825 C a score=57113.000000 s hg38.chr19_GL949753v2_alt 76712 31 + 796479 cccagaccaggtcagtttcttaagtgatctg s panTro4.chr19 59010163 31 + 63644993 cccagaccagatcagtttcttaagtgatctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652507 31 - 106955855 ccCAGACCAGGTCAGTTTCttaagtgatctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59935973 31 + 64156825 cccagaccaggtcagtttcttcagtgatctg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073319 31 + 51301725 CCCAGACCAGGTCAGTTTCTTAAGTGATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778529 31 + 50890351 cccagaccaggtcagtttcttaagtgatctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45345994 31 + 49145316 ctcagaccaggtcagtttgttcagtgatctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e canFam3.chr1 19577192 167 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=563141.000000 s hg38.chr19_GL949753v2_alt 76743 265 + 796479 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA s panTro4.chr19 59010194 265 + 63644993 agctataatggcggtaaca--gagcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagccgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccgggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGGGGACTATTTTGTTCCGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652538 261 - 106955855 agctataatggcggtaaca--gggcact----tagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggacaggttagtcattcaccttctcccaggctcagtttcttcgtctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGACTATTTTGTTCTGCCTTAGGTGGGTCGCAGCAGGAGGACTAG-----TCACTCCGGAGCGACTTCTAGGCTGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936004 264 + 64156825 agctacactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcgaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATACATAAACTATAAAATGAGGATTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073350 264 + 51301725 AGCTATAATGGCGGTAACA--GGGCACTGTGAGAGCCCGCAGAAAGCTCCTAACCCATCTGGGATGAGACCTAGCGCTTCCAGGACGAGCTGATGTTGAGCTGAGA--CCTCGAAGGAAAGGTTAGTCATTCACCTTCTCCcgggctcagtttcttcatctgtaaaatgggctttcATACATAAACTATAAAATGAGGACTATTTTGTTCCGCCTTAGGT-GGTCTCAGTAGGAGGACTAG-----TCACCCCGGAGCGACTTCTAGGCAGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778560 264 + 50890351 agctatactggcggtaaca--gggcactgtgagagcccgcagaaagctcctaacccatctgggatgagacctagcgcttccaggacgagctgatgttgagctgaga--cctcaaaggaAAggttagtcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTTATACATAAACTATAAAATGAGGACTATTTTGTTCCTCCTTAGGT-GGTCTCAGTAGGAGGTCTAG-----TCACCGCAGAACGACTTCTAGGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346025 264 + 49145316 agccatactggcggttaca--gggcactgtgagagcccacagaaggctcctaagccatctgcgatgagacctagcgcttccaggatgagctgatcttgagctgagaggcctcaaagggcaggttaatcattcaccttctcccgggctcagtttcttcatctgtaaaatgggCTTTCATGCATAAACTATAAAATGGGAACTATTTTGTTCTGCCTTAAGTGGATCGCAGCAGGA---CCAG-----TCACTCCGGACCGACTTCAAGGCTGAGA i calJac3.chr22 C 0 I 386 s canFam3.chr1 19577359 271 - 122678785 agctaca-tggaggtcacatgtggcactgagagagtccacagaaggcccctaaccctcctgggatgagacttaaagcttccaggatgaactgattttgagctgaga--cctcaaaggatagctaagttatctgtcctctcccagcctccgcttcttcatctgtgaaatgggCTTTCATGAGTCAACTCTAAAATGAGGACTATTGCATTCCGCCTTGGATGAGTCGCAGCTGCAGGACTGGGAGTACTCCTCAGGCACGACTCCTAGGCGGAGA i canFam3.chr1 I 167 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=750.000000 s hg38.chr19_GL949753v2_alt 77008 1 + 796479 C s panTro4.chr19 59010459 1 + 63644993 C i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652799 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936268 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073614 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778824 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19577630 1 - 122678785 C i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45346289 386 + 49145316 I e macFas5.chr19 54942282 1 + 59248254 I a score=222584.000000 s hg38.chr19_GL949753v2_alt 77009 135 + 796479 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCACAGAG s panTro4.chr19 59010460 135 + 63644993 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGACACCACTTCC-TTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCGAGTGCGCACGCGCAGGCTCCGAAAGCGGGCCGTCGCCCAGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652800 136 - 106955855 TAAGGAGGTTC-CACGCAGGTCCGCAAAGTCAGGCTTACGCTTGCTCCTGACACTACTTCCTTTTACCTCCACGGCTCC--ATCTTTGTTCTGCGCAAGTGCGCACGCGCAGGCTCCGAAAGCGGAACCTCGCACAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936269 133 + 64156825 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCTTGGCACTACTTCC-TTTACCTCTGCTGCTCG--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGAAAGCGGTACCTTGCACGG-- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073615 135 + 51301725 TAAGGAGATTC-CACGCAGGTCCGCAAAGTCAGGCTTGCGCTTGCTCCTGGCACTACTTCC-TTTACCTCCGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGAAGCCGAAAGCGGTACCTTGCACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778825 135 + 50890351 TAAGGAGATTC-CACGCAGGTCCGCAAAGCCAGGCTTGCGCTTGCTCTTGGTACTACTTCG-TTTACCTCGGCGGCTCC--ATCTTTGTTCTGCGCTAGTGCGCACGCGCAGACTCCGACAGCGGTACCTTGCACAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346675 133 + 49145316 TAAGGAGATCC-CACGCAGGTGCGCAAA--CAGGATTGCGCTTGCTCCCGGGACCACGTCC-TTTACCACCGCTGCCTC--ATCTTGGTTCTGCGCTAGTGCGCACGCGCAGACTCTGACAGCAGCGCCTCGCGCAGAG i calJac3.chr22 I 386 C 0 s canFam3.chr1 19577631 110 - 122678785 -----AGATTTGCACTTAAATTCGCAGTGC--------CGCCTGCT------------TTC-TTTGCC---GCGGATTCTGACAGTTGTCCTGCTCCAGTGCGCGCGTGCGGACTCAGGCTGCGGGGGCTCGAGCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3616370 915 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=1139465.000000 s hg38.chr19_GL949753v2_alt 77144 537 + 796479 GGACCACAACTCCCAGAGTGCTCCGCGTCCTTGCTTTCGCCTC------TACTTGTGCTCCAGGGCGCACGCGCAGCCCTGGGAGCGGGTTCTCGCGC----ATAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCGGAGACAAAGATGGCTGCGAGTAAGTGCAGGTTCCGGTGGCGCACGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGAACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTTCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC s panTro4.chr19 59010595 537 + 63644993 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------TACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGGTTCTCGCGC----ACAGGGACCACAACTCCCAGGGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTCTGGGAACCTCTGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTTG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CCAGGCGCAAACTTGCATCGTCCA-----CAC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102652936 537 - 106955855 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTTTCCTC------CACTTCTGCTCCAGGGCGCACGCGCAGCCCGGGGAGCGGTTTCTCGCGC----ATAAGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGCTGTCGCCGCCGCCGAGACCAAGATGGCTGCGAGTAAGTGCAGGTGCCGGTGGCGCGCGGGGCTCGGGTAGTTTCGGGAACCTCCGGGCGGTCCGGGGACTGAGGTGCGTCAGGGCAGGGGTGGAAGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACCGGGGGCAGCTACTTGCAGGGGTGACGCTCCTCG-CCACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGGCCTCGGTGCGTGAGTGCT--CTAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCTCCCTCCATCCCTCCATCTTGTACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59936402 433 + 64156825 --------------------------------------------------------------------------------------------------------AGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACTCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTTGTCATCGGGGGCCTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47073750 527 + 51301725 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCTTGTC------CACTTCTGCTCCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----GTAGGGACCACAACTCCCAGAGTGCTCCGCGTCCT------CGCAGGTGTCGCCGCC---GAGACCAAGATGGCTGCGAGTAA------GTGCCGGTGGCGCGCGGGGCTC-GGTGGTACCGGGAACCTCCGGGCGGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCATGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGGTTAGAGGTCACGGGGGGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTTAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCGTCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46778960 533 + 50890351 GGACCACAACTCCCAGAGTGCTCCGCGTCCTGGCTTTCGCCTC------CACTTCTGCTTCAGGGCGCACGCGCAACCCGGGGAGGGGTTTCTCGCGC----ATAGGGACCACAACTCCCAGAGTGCCCCGCGTCCT------CGCCGGTGTCGCCGCC---GAGACCAAGATGGCTGCCAGTAAGTGCAGGTGCCGGTGGCGCGGGGGGCTC-GGTGGTACCGGGAACCTCCGGGCAGTCCTGGGACTGAGGTGCGGCAGGGCAGTGGTGGAGGCGATGGGGTCCGTGCTGGAG-GGGGACGCAGAAGTCACGAGGGGGCTCCTCCAGGGCAGGGGTGGCACGAGAGGATTAGAGGTCACGGGGCGCAGCCACTTGCAGGGGTGACCCTCCTCG-CCACCCCTTCAGGACTCGGCGCCTTCCTCAAGAATGTCTGGGACAAGGAGCCAGTGCTGGTCGCGTCCTTCGTCATCGGGGGCATCGGTGCGTGAGTGCT--TCAGGCGCAAACTTGCATCGTCCA-----CCC-----------CCGTCCCCCTACATCCCTCCATCTTGTACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45346808 518 + 49145316 GGACCACAACTCCCAGGGTGCTCCGCGTCCTGGCTTTCGCCTC------CACCTCTGCTCCAGGACGCGCGCGCGACCAGGGGAG-----TCTCGCGC------AGAGACCACAACTTCCAGAGTGCTTCGCGTGCT------CTCCGGTGTCGCCGCCGCCGAGACCAAGATGGCCGCAAGTAAGTGCAGGTGTCGGTGGCGCGCGGGGCTC----------GGGAATCTCCAGGCGGTCCTGGGACTAAGGTGTAGTGGGAAAGTGGTGGAGGCGATGTGGTCCGTGCTGGAG-GGGGAGGCAGAAGCTACGAGGGGGCTCCTCCAGGGCA-GGGTGGCACGAGAGGGTTAGAGGTCACTGGGGGCAGCCCCTTGCAGGGGTGACCCTCCTCG-CCACTCCTGCAGGACTCGGCGCCTTCCTCAAGAATGCTTGGGCCAAGGAGCCAGTACTGGTCGTGTCCTTCTTCATCGGGACCCTCGGTGCGTGAGT-CT--CCAGGCGCAAACTTGCATCATCCA-----CCC-----------CTGTCCCTCCACATCGCTCCATCTTGTACCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3617285 491 + 145441459 GAACTACAACTCCCGAAAGGGTCCACGTCCTCG-------------------------------------------CCCAAGGGGCGGGGCCTCACGCAAGGAGAAGGACCACAACTCCCAGAGAGCTCCGC-TCCT------------TGTCGCCGCC---AAGAACAAGATGGCCGGGAGTAAGTACAGGTTT--GGAGCTCGCGGGGATCAAGTAGTTCCAGGAAACTGTGGGCTGATCCGTGGCTGAGTCTCAGTGGAGCCTTGGGGACCG----GTAATCCGTCCCAGAATAGGGGCGCGGCAGTCACGAGGGTG------CAGAGCAGGGGTGATACGAGAGTGTTAGAGGTCACC----GCAGTAGTCCCCAAGGGTGACTGTCTTC--TCACCTCTCTAGGAATCTCTGCCTTCCTCAAGAATGCCTGGGCGAAGGAGCCGGTGCTGGTGGTGTCCTTCTCTGTCTGGGGCCTCGGTGAGTGCCCCCTTCCCCGGCGCGAAAGTGCATCCTCCA-----CCCGGAAGTCATCAGCATTCCACGGCACAGTTTCATCTCGCATCCC i mm10.chr7 I 915 I 1422 s canFam3.chr1 19577741 541 - 122678785 GGACCACAACTCCCAGAGTGCTTCGCGTCCTCGCCACAGCCCCGGGCCGCAGTTCTGTGCCAGTGCGCATGCGCA-CTCAGATTGCGGAGCCTCGGGC----GCGGGAACCACAATTCCCAGAGTGCTCCGGCCGCTTgctgccgccgccgccgccgccgccgAGACCAAGATGGCCGGGAGTAAGTGAGGGCGCCCGCGGCGCGCTGGGTCC-GCTGGTTCCCGGAGCCCC--GGTGGTGCCGGTGCTGGGGCACGGCGGAGCCTCCGTGCAGGCGGTGGGGGCAGGGCCACAG-GGGGGCGCCGAGATCACGAGAGGGCTCCTCCGGGGCGGGGGTGGCGCGAGAGGGTTAGAGGTCACCGGAGGC-GTCCCCTGCAGGAATGACCCTCCTCGCCCTCCCCTCCAGGACTCGCCGCCTTCCTCAAGGATGCCTGGGCCAAAGAGCCGGTGCTGGTCGCGTCCTTCACCATCGGGGGCCTCGGTGCGTGAGCGTG--C--AGCGC-------CCTCACCCAAGGTCCCG-----------TCGCTCCCCACTAGCGCTCTGCCCTGTACCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=74006.000000 s hg38.chr19_GL949753v2_alt 77681 48 + 796479 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC s panTro4.chr19 59011132 48 + 63644993 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102653473 48 - 106955855 TAAAGCCCTATCGCCGCCCTCGGGTCCCCTCTAGTGTGTCTGCACCCC i nomLeu3.chr10 C 0 I 1335 s rheMac3.chr19 59936835 48 + 64156825 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074277 48 + 51301725 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779493 48 + 50890351 TAAAGCCCTGTCGCCTCCCTCGGCTCCCCTCCAGTGTGTCTGCACCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347326 23 + 49145316 -AAAGCCCTATCGCCGTCCTCGAG------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578282 35 - 122678785 -----------CAACGTTCTAGGGCCCCCTC--GTGTGTCTGCACCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e macFas5.chr19 54942282 1 + 59248254 I a score=411484.000000 s hg38.chr19_GL949753v2_alt 77729 356 + 796479 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaatctctgCCCTCTGCCCTGGAACTGCCCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--CAGGGATGGG s panTro4.chr19 59011180 349 + 63644993 CACGGCATCCCCTTATCTATCCCCATACCCATTATAACCTCTCCACCATCGCCCCCCGCGT------TCC----TCTCCACCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcctt---aacacctgagcaccaaaaa-aaagtccagatcctcc---tcctccttttcatctttcctctc------ccccattctgaatt--gagttggcttgggtggaggtgggactggggaatctgtgtcttgtg-aaaatccccgtatgatcccaatgt---gccttgctgattgaaaat-------ctctgCCCTGGAACTGCGCTACTCACACTTTAATTAGCACCGGAGTTCC-TG--TAGGGATGGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59936883 360 + 64156825 CGCGACATCCCCTTGTCTATCCCCATACCCATTATAACGCCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaatcctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---ttctccctttcatctcccctctc------ccacattctgaatt--gagttggtttggttggtggtggggctgggaaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTGCCCTGGAACTGTGCTGCTTACACCTTAATTAGCACCGCAGTCCC-TG--CACGGATGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074325 349 + 51301725 CACGAC------------ATCCCCATACCCATTATAACGTCCCCACCGc--ccccccGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAATCCCTCTAAATGAGACGTTCTCAACCCTGCTTATGCGTTAGCAACACCTGAGCACCAAAAATAAAGTCCagatcctcc---tcctccctttcatCTCCCCTCTC------CCACATTCTGAATT--GAGTTGGTTTGGTTGGTGGTGGGGCTGGGGAATCTGTGTCTTGAG-AAAATCCCCCTATGATCCTAATGTGTCGTCTTGCTGATTGAAAACCTCAGCCCTCTGCCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGatggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779541 360 + 50890351 CACGACATCCCCTTGTCTATCCCCATACCCATTATAACGTCTCCACCG---CCCCCCGCAT------TCC----TCTCCCCCTACCCAATACGCTCTTAACCCCTCTAAATGAGACgttctcaaccctgcttatgcattagcaacacctgagcaccaaaaataaagtccagatcctcc---tcctccctttcatctcccctctc------ccacattctgaatt--tagttggcttggttggaggtggggctggggaatctgtgtcttgtg-aaaatccccctatgatcctaatgtgtcgtcttgctgattgaaaaccTCAGCCCTCTACCCTGGAACTGTGCTACTCACACCTTAATTAGCACCGCAGTTCC-TG--CAGGGATGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45347349 344 + 49145316 -------TCCCCTTGTCTATCCCCATACCCTTTGTAACCTCTCCACCATC-GCCCCCGCGT------TCC----TCTCCATCTACCCAACACGCTCTTAACCCCCCTAAATGAGACGTTCTCAACCCTACTTATGCATC---AACACCTGAGCACCAAAAATAAAGTCCAGATCCTCCTCTTCCTCCCTTTCAGCTCCCCTCTC------C--Tattctgaatt--gaattggcttggctggaggttgggctggggaatctgcgtcttgtgaaaaatccccctattatcctaacgt---gccttccaga-tgaaaac-------ctttgTTGTGGAACTCTGCTGTTCACATTTTAATTAGCACCGGAGTTCCTTG--TAGGGGTGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578317 320 - 122678785 -------------------GCCCCACCCCCACTATTAGGACCACCCTGTACACACCTACCTGGGAGGTCCATGACCCTCCCCCACCCCACCCACCC-----CACCCTCAGGGCGAggttctcagccctggctgtgcatt-----------------aaaaacacGGTCAGAATCCTACCACTCCTCACCCTTgcccccccccccgccccgccccACACTAAGCTTGGAGTGGGGTGGGGTGGAGGTGGGGCTGGGGAATCTCCG----GTG-AAAAGCCTCTTCCGCGCT---------GCCTT---GACTGACAGC-------TTCTGTTCTAGAGCAGGGCTGCTCAGACTTTAAC--GTGCGGGAGGTCT-TGTTCAAGGGCAGG i canFam3.chr1 C 0 I 307 e mm10.chr7 3617776 1422 + 145441459 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=149268.000000 s hg38.chr19_GL949753v2_alt 78085 164 + 796479 GGCGGGGGATTGTTAAAATGTAGC------------------ttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA s panTro4.chr19 59011529 182 + 63644993 GGCGGGGGATTGTTAAAATGTAGCGCttttttttttttttttttttttttttgcgatggagtctca--ctctcacccaggctgaagtgcagtggcgcgatcccggctcactgcaacctcggcctcctgggttcaagggattctcctgcctcagcctcccgagtagctgggattacaggcgcCCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59937243 160 + 64156825 GCC------------------------tttttgtttgtttggtttttttttggagacagagtctcgccctgtcacccaggctgatgtgcagtgaggcgatcccagctcactgcaaactcagcctcccgggttcaagggattcccctgcctcagcctctcgagtagctggggctacaggcgccca i rheMac3.chr19 C 0 I 158 s papAnu2.chr19 47074674 148 + 51301725 gcc------------------------ttttt----------ttttttcttggagatggagtctca--ctgtcacccgggctgatgtgcagtgacgcgatcccggctcactgcaaactcagcctcccgggttcgagggattcccctgcctcagcctctcgagtagctgggagtacaggcgccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46779901 155 + 50890351 GCC------------------------tttttttttttt---tctttttttggagatggagtctca--ctgtcacccaggctgatgtgcagtgacgcgatcccagctcactgcaaactcagcctcccgggatcaagggattcccctgcctcagcttctggaatagctgggactacaggcgccca i chlSab2.chr6 C 0 I 160 s calJac3.chr22 45347693 176 + 49145316 GGCGGGGGATTGTTAAAATGTAGtttgtttttggtttttcttttttcttttggaaacatagtctta--ctgtcactcaggctga-----aatgacgccat-ctggctcactgcaacctccgcttcctgggttcaagggatttttctgcctcagcctcctgagtagctgggatgacagacacCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=56234.000000 s hg38.chr19_GL949753v2_alt 78249 289 + 796479 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcagtgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctaacctc--gtgatcctcccaactcggtctcccaaagtgctgggattacaggcgtgag s panTro4.chr19 59011711 289 + 63644993 GCTAAttttttgtttttgtttt--------------tgagactgagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgcaagccccgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgcccccatgcccggctaattttttgtatgttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatcctcccaactcggcctcccaaagtgctgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s calJac3.chr22 45347869 292 + 49145316 TCTAATTttttctttctttctttttttttattttcctgctatgcagtttccctctgtcttccaggctggagtgcagtggcatgatctcggctcactgcaacctctgcctttggggttcaagtgattctcctatctcagccttttgagtaagtgagattacaggcactca---ccacgtctggctaatttttt-tatttttagtagagacaggatttcgccatgttggccaggctggtctggaactcctgacctcaagtgatccac---------tttcccaaagtgctgagattataggcatgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e papAnu2.chr19 47074822 0 + 51301725 C e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=5755.000000 s hg38.chr19_GL949753v2_alt 78538 17 + 796479 ccaccgcgcccggccAG s panTro4.chr19 59012000 17 + 63644993 tcaccatgcccggccAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074822 17 + 51301725 ccaccacgcctggctaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45348161 17 + 49145316 ccactgggccaagccag i calJac3.chr22 C 0 I 1353 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4450.000000 s hg38.chr19_GL949753v2_alt 78555 42 + 796479 Cttttttttttttttttttttgagatggcgtctcgctctgtc s panTro4.chr19 59012017 37 + 63644993 C-----tttttttttttttttgagatggcatctcgctctgtc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47074839 40 + 51301725 t--ttttttgtatttttagtagagacagggtttcgccgtgtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e ponAbe2.chr19 55887748 25 + 60714840 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=27544.000000 s hg38.chr19_GL949753v2_alt 78597 103 + 796479 ttccaggctacagtgcaatggtttgatcatggctcactgcaacctccgcctctagggttcaagtgattctcctgcctccgcctcccaagta---------------------gctgggattaca s panTro4.chr19 59012054 103 + 63644993 ttccaggctagagtgcaatggtttgatcatggctcactgcaacctccgcctccagggttcaagtgattctcctgcctccgccacccaagca---------------------gctgggattata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887773 103 + 60714840 ttccaggctagagtgcaatggtttgatcatggctcactgtaacctccgcttacagggttcaagtgattttcctccctcagcctcccaagta---------------------gctgggattaca i ponAbe2.chr19 I 25 C 0 s papAnu2.chr19 47074879 91 + 51301725 -----agccaggatg----gtcttgatc--------tcctgacctc----------------gtgatccgccctcctctgcctcccaagtgctgggtgGGCCACTGCTCacccctgggattaca i papAnu2.chr19 C 0 I 5 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I e rheMac3.chr19 59937403 158 + 64156825 I a score=4123.000000 s hg38.chr19_GL949753v2_alt 78700 7 + 796479 ggcgagc s panTro4.chr19 59012157 7 + 63644993 ggcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887876 7 + 60714840 ggcgggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937561 7 + 64156825 ggcaagt i rheMac3.chr19 I 158 C 0 s papAnu2.chr19 47074975 7 + 51301725 ggcacgt i papAnu2.chr19 I 5 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e chlSab2.chr6 46780056 160 + 50890351 I e macFas5.chr19 54942282 1 + 59248254 I a score=924732.000000 s hg38.chr19_GL949753v2_alt 78707 752 + 796479 accaccacgcccggctaatttttgtatttttagtagagacaaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccagccacaactggccactgagcatttgaagtggtgctggtatgaattgaggtggtataagac--actggatttcaaaaacttagtataacagagtgtgtaaactaccaataatcttttgttgattacatggcgaagtgatgttttggatgtactatggttttttttgttt---gtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacctggct--gtttttgtattttcagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaggtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca s panTro4.chr19 59012164 755 + 63644993 accaccacgcccggctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtcttg-aactcctg-accgcaagtgatctgccttcccaaagtgct-gggattacaggggtg-agccactgcgcccggccaaactgtaggttct-gattctgtaggtctgagg-tggggcatgggattctgcatttttgaagagttcccaggtcttgtcagtactgctggtccaccagccaGGCACTAGGTTAAGGTTCTGAACACTtattcagtatggcagccaccaaccacacctggccactgagcatttgaagtggtgctggtatgaattgaggtggtgtaagac--actggatttcaaaaacttagtataacagagtgtataaactaccaataatcttttgttgattacatgtcgaagtgatgttttggatgtactatggtTttttttttttttggtttgtttttgtttttttgagacggagtttcgcttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggct--gtttttgtatttttagtagagacggggtttcatcatattggtcaggctggtctcgaactcctgacctcaagtgatccacccgtctcagcctcctaaagtcctgggattataggcatgagccacctcgcccatcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55887883 759 + 60714840 accaccacgcccggctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggctggtcttgaaactcctgaaccgcaagtgatctgccttcccaaagtgctggggattacaggggtgaagccactgcgcctggccaaactgtaggttct-gattctgtaggtctggggatggggcatgggattctgcattttttaagagttcccaggtcttgtcagtactgctggcccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcagtatggcagccaccagccacatgtggccactgagcacttgaagtggggctggtatgaattaaggtggtataagac--actggatttcaaaaactcagtataacagagtgtgtaaactaccaataatcttttgttgattacatgttgaagtgatgttttggatgtaccatgttttttttttttt--ggtttggttttgtttttttgagacggaatttcacttttgtccaggctagagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgtctcagcctccttagtagctgggattacaggcgcatgccactacacccggctaagtttttgtatttttagtagagatggggtttcatcatattggtcaggctggtctcgaactcctgacttcaggtgatccacccgtctcggcctcctaaagtcctgggattataggcatgagctacctcgcccatcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59937568 751 + 64156825 accaccacgcctggctaatttttgtgtttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattactggagtg-agccactgcgcccggccaaactgtgggttctcgattctgtaggtctggga-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccgccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaaatgaggctggtatgcattgaggtggtataagacatactggatttcaaacacttagtataactaagtatgtaaactaccaatcgtcttttgttgattacatgttgaagtgatg-tttggatataccatggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccggggtcaagcgattctcctgtctcagcctcctgggtagctgggattacaggtgcacgccactacacc-agctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgatctcaggtgatccacccgcctcagcctcctaaaatcctgggattacaggcgttagccacctcacccagcca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47074982 750 + 51301725 gccaccacgcctggctaatttttgtatttttagtagagatgaagtttcaccatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-ggggttaccggagtg-agccactgcgcccggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatGGGATTCTGCATTTTTGAAGAGTTGCCAGGTCTTGTAAGTACTGTTGGTCCACCAGCCAGGCACTAGG-TAAGGTTCTGAACGCTTGTTCAATCTGGCAGCCACCAGCCATACCTGGCCACTGAGCACTTGAAGTGAGGCTGGTATGAATTGAGGTGGTATAAGACACACTGGATTTCAAACACTTAGTATAACTAAGTGTGTAAACTACCAGTCGTCTTttgttgattacatgttgaagtGATG-TTTGGATATACCATggtttttttt------ggtctgtttttgtttttttgagacggagttttactttcgtctaggctggagtgcaatggcctgatctcaactcactgcaacctctgcctcccgggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcacgccactacact-ggctaatcttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780216 751 + 50890351 accaccacgcctggctaatttttgtatttttagtagagatgaagtttcactatgttgttcaggctggtcttg-aactcctg-accgcaagtgatccgctttcccaaagtact-gggattaccggagtg-agccactgcgcctggccaaactgtgggttct-gattctgtaggtctgggg-tggggcatgggattctgcatttttgaagagttgccaggtcttgtcagtactgttggtccaccagccaGGCACTAGG-TAAGGTTCTGAACACTtgttcgatctggcagccaccagccacacctggccactgagcacttgaagtgaggctggtatgaattgaggtggtataagacacactggatttcaaacacctagtataactaagtgtgtaaactaccaatcgtcttttgttgattacatgttgaagtcatg-tttggatataccatgggttttttt------ggtctgtttttgtttttttgagacggagttttgctttcgtctaggctggagtgcgatgacctgatctcaactcactgcaacctctgcctcccaggttcaagcgattctcctgtctcagcctcctgggtagctgggattacaggcgcatgccaccacacctggctaattttttgtatttttagtagagacagggtttcatcacattggtcaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcctaaaatcttgggattacaggcgttagccacctcacccagcca i chlSab2.chr6 I 160 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e calJac3.chr22 45348178 1353 + 49145316 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=13755.000000 s hg38.chr19_GL949753v2_alt 79459 7 + 796479 agtatgt s panTro4.chr19 59012919 7 + 63644993 agtatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888642 7 + 60714840 agtatgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938319 7 + 64156825 agtatgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075732 7 + 51301725 agtatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780967 7 + 50890351 agtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349531 7 + 49145316 agtatgt i calJac3.chr22 I 1353 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19578637 307 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=372991.000000 s hg38.chr19_GL949753v2_alt 79466 206 + 796479 ttcttaaaatttgtttcatctgtatctcttatttttactgtagctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC s panTro4.chr19 59012926 202 + 63644993 ttcttaaaatttgtttcatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcTTAC-CATCTGT----CAGCACTGGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGACTCCTGGCTCCCACC-------------------------------------------------CTAAATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888649 206 + 60714840 ttcttaaaatttgttttatctgtatcttttatttttactgtggctactagaagatataaaattatatacctggctcttac-catctgtcagacagcactgGCCTAGAACATTCCTTTTATGAACTG----TACCCCATCCCCCAGGATTCCTGGCTCCCACT-------------------------------------------------CTAGATGGACTGTG----GTCAGTGACTGTTGTTTGTGCAACCCTTTCTCCTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938326 208 + 64156825 ttcttaaaatttgtttcatctatatc--tcatttttactgtggctactaaaagatataaaattatatacctgggtcttac-catctgtcagacagtgctgGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACTTGTCAGTGACTGTTGTTTGTCCAAACCTTTCTTCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075739 208 + 51301725 ttcttaaaatttgtttcatCTATATC--TTATTTTTACTGTGGCTACtagaagatataaaattatatacctGGCTCTTAC-CATCTGTCAGATAGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCTGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGATGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46780974 204 + 50890351 ttcttaaaatttgttttatctgtatc--ttatttttactgtgcctactagaagatataaaattatatacctggctcTTAC-CATCTGTC----AGTGCTGGCCTAGAACATTCTTCTTATGCACTG----TACCCCATCCCCCGGGACTCCTGGCTCCCACC-------------------------------------------------CTAGGTGGACTGTGACCTGTCAGTGACTGTTGTTTGTGCAAACCTTTCTCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349538 250 + 49145316 ttcttaaaatttgtttcatctgtatcttttatttt---------tactagaagatacaaaattatatacctggctcTTAC-CATCTGTCAGACCTTTCGGGCCTAGAACAATCCTTTTATGTACTG----TGCCCCGTCCCCCAGGACTCTTGGCTCCCACTGAGTGGACTGTGACTCCTTAGTGGCTGTTCTTTGGACTCTTGGCTCCCACTGAGTGGACTGTGACCCCTTAGTGGCTGTTGTTTGTACAACCCTTTCTCCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19578944 196 - 122678785 tttttaaaa----actcatttgtatcttttattttta-tgtgcctgttagaaggtgtgaaactaaatatgtggctcttatgtttctgctggacagtgctgGCCTAGAACATTCTTTTTACCCCCCACCCCTGCCCTACTCCCTGAGACTCCTGGTGCCCACC-------------------------------------------------CTAGGTGGACTGTGATTTCTGAG--------------ACAACCCTTCCTTTCC i canFam3.chr1 I 307 I 4 e mm10.chr7 3617776 1422 + 145441459 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=22779.000000 s hg38.chr19_GL949753v2_alt 79672 16 + 796479 CAGTTTGTAAGGCttt s panTro4.chr19 59013128 16 + 63644993 CAGTTTGTAAGtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55888855 16 + 60714840 CAGTTTGTAAGtcttt i ponAbe2.chr19 C 0 I 686 s rheMac3.chr19 59938534 16 + 64156825 CAGTTTGTAACAGTTT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075947 16 + 51301725 CAGTTTGTAACAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781178 16 + 50890351 CAGTTTGTAACAGttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45349788 16 + 49145316 CAGTTTGTAACAGtct i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=1179.000000 s hg38.chr19_GL949753v2_alt 79688 1 + 796479 t s panTro4.chr19 59013144 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889557 1 + 60714840 t i ponAbe2.chr19 I 686 C 0 s rheMac3.chr19 59938550 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47075963 1 + 51301725 T i papAnu2.chr19 C 0 I 21 s chlSab2.chr6 46781194 1 + 50890351 t i chlSab2.chr6 C 0 I 5 s calJac3.chr22 45349804 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e macFas5.chr19 54942282 1 + 59248254 I a score=21417.000000 s hg38.chr19_GL949753v2_alt 79689 13 + 796479 tttttttttt---ttt s panTro4.chr19 59013145 13 + 63644993 tttttttttt---ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889558 13 + 60714840 tttttttttt---ttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59938551 12 + 64156825 -TTTTTTTTT---TTT i rheMac3.chr19 C 0 I 661 s macFas5.chr19 54942283 15 + 59248254 -tttctttttgggttt i macFas5.chr19 I 1 I 1 s papAnu2.chr19 47075985 12 + 51301725 -ttttttttt---ttt i papAnu2.chr19 I 21 C 0 s chlSab2.chr6 46781200 9 + 50890351 -ttttttttt------ i chlSab2.chr6 I 5 I 3 s calJac3.chr22 45349805 13 + 49145316 tttttttttt---ttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I a score=438068.000000 s hg38.chr19_GL949753v2_alt 79702 286 + 796479 tttggtgatggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcctgagtagctgggattacaggctcctgccaccacgcccggctaattttcgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcttgagccactgtgcccggcc s panTro4.chr19 59013158 282 + 63644993 ----gtgatggagtctctctctgttgcccgggctggagtgcaatggcacaatctgggctcactgcaacctctgcctcccaggctcaagggattcttctgcctcagcctcccgagtagctgggattacagcctcctgccaccacgcccggctaatttttgtatctttagtagagatggggtttcat----catgttgtccaggctggtcgcgaactcctgacctcaggtgatccgcccacattggccgcccaaagtgctgggattacaggcgtgagccactgtgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889571 286 + 60714840 tttggggacggagtctctctctgttgcccaggctggagtgcaatggcacaatctgggcttactgcaacctctgcctcccaggttcaagggattcttctgcctcagcctcctgagtagctgggattacaggcttctgccaccacacccggctaatttttgtgcctttagtagagatggggtttcat----cacgttgtccaggttggttgtgaactcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccacggtgcccagcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54942299 284 + 59248254 --tttagacagagtctcactctgtcgcccaggctggagtgcaatggcgcaatatcagctcactgcaacctctgcctcctgggttcaagtgattctcctgccttagcctcccgagtagctgggattacaggcgcccactaccatgcccagcaaatttttgcatttttagtagagtcagggtttcac----tatattggccaggctggtctccaactcctgacctcaggtgatctgcctgccttatcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47075997 282 + 51301725 ttttgcgacagagt----ctctgttgcccaggccagagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgccaggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781212 282 + 50890351 gtttgcgacagagt----ctctgttgcccaggctggagtgcagtggcacaatgtgggctcactgcaacctctgcctcccaggctcaagggattctcctgcctcagcctgctgaggagctgagattacaggctcctgccgccatgcccggctaatttttgtatctttagtagagatggggattcat----catgttgtccaggctggtcgtgaactcctgacctcaggtgatctgcccacctttgcctcccaaagtgctgggattacaggcatgagccactgtgcctggcc i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45349818 280 + 49145316 ---tgagatggaat----ctgtgtcacccaggctggagtgcagtggcacgatctgggctcactgcagcctcaacctcccaggctcaaggg--tctcctgcctcagcctcctgaatagctgggattataggcgcc-accaccacatgcagctaattttttagtttttagtagagatggggtttcattcaccatgttggtcaggcaggtctcgaactcctgacctcaggtgatctgcccaccttgggctctcaaagcactgggattacaggcgtgagccaccgcgtccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e nomLeu3.chr10 102653521 1335 - 106955855 I e rheMac3.chr19 59938563 661 + 64156825 I a score=5096.000000 s hg38.chr19_GL949753v2_alt 79988 3 + 796479 AAA s panTro4.chr19 59013440 3 + 63644993 AAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889857 3 + 60714840 AAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654856 3 - 106955855 AAA i nomLeu3.chr10 I 1335 C 0 s macFas5.chr19 54942583 3 + 59248254 AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076279 3 + 51301725 aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781494 3 + 50890351 AAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350098 1 + 49145316 --G i calJac3.chr22 C 0 C 0 e mm10.chr7 3617776 1422 + 145441459 I e canFam3.chr1 19579140 4 - 122678785 I e rheMac3.chr19 59938563 661 + 64156825 I a score=205892.000000 s hg38.chr19_GL949753v2_alt 79991 113 + 796479 TTTGTAACAG-TCTTGATTTCTCCAGAACAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- s panTro4.chr19 59013443 113 + 63644993 TTTGTAACAG-TCTTGATTTCTCCAGAATAGTCCCATGACACTA-CCCCCA---------GGATGCTCCATGATGA-CCCTACACTCAA-ACGTGCTCATTCCATGACCAACCCCACTGCTGCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889860 112 + 60714840 TTTGTAACAG-TCTTGATTTCTCCAGAATA-CCCCATGACACTACCCCCCA---------GGATGCTCCATGATGACCCCTACACTCAA-AC-TGCCCATT-CACAAACAACCCCACCGCTGCCTC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102654859 114 - 106955855 TTTGTAACAG-TCTTGATTTCTCCGGAATAGTCCCATGACACTA-CTGCCA---------GGATGCTCCATGATGACCCCTACACTTAT-ACGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942586 115 + 59248254 TGTGTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076282 115 + 51301725 tgtgTAACAG-TCTTAATTTCTCCAGAATAGTCCCATGACACTA-CCCACA---------GGATGCTCCATGATGACCCCTACACTCAAAACGTACTCATTCCACGACCAACCCCAGTGCTTCCTC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781497 80 + 50890351 TGTGTAACAG-TCTTAATTT---------------------------------------------CTCCATGATGACCCCTGCACTCAATATGTACTCATTCCACAACCAACCCCAGTGCTTCCTC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350099 107 + 49145316 TTTGTAACAA-TCTTGATTTCTAAGGAACAGTCCCATGACACCA-CCCCCA---------GGATGCTCCGTGATGAACGCTA--------ATGCACTCATTCCATGACCAACCCCACTGCTCCCTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19579144 123 - 122678785 TTTGTAACAGTTCATGATTCCACTGGAAGATCCCCAAACCATTC-CTCTCACCCACTACCTTGTGCTCCCTGACCACCTCTACACTC---ATGCCCTCATTCTGTGACCACCCCCATGTCTTCCCTC i canFam3.chr1 I 4 C 0 e mm10.chr7 3617776 1422 + 145441459 I e rheMac3.chr19 59938563 661 + 64156825 I a score=98133.000000 s hg38.chr19_GL949753v2_alt 80104 47 + 796479 ---------CTCCAGGCCCCACGTATCTGTGAGTGTTAGGCTCCAACCCCTA------CCTC s panTro4.chr19 59013556 47 + 63644993 ---------CTCTAGGCCCCACGTATCTGTGAGTGTTAGCCTCCCACCCCTA------CCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55889972 45 + 60714840 ---------CTCTA-GCCCCATGTATCTGTGAACGTGAGGCTCC-ACCCCTA------CCTC i ponAbe2.chr19 C 0 I 51 s nomLeu3.chr10 102654973 46 - 106955855 ---------CTCTAGGCCCCAT-TATCTGTGAGTGTTAGGCTCCCACCCCTA------CCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942701 47 + 59248254 ---------CTCTAGGCCCCATGTATCTGTGAGTGTTAGACTCCTACCCCTA------CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076397 47 + 51301725 ---------CTCTAGGCCCCCTGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781577 47 + 50890351 ---------CTCTAGGCCGCATGTATCTGTGAGTGTTAGACTCCCACCCCTA------CCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350206 43 + 49145316 ---------TTCTAGGCCCCATGTATCTGT----GTTGGGCTCCCACCCCTA------ACTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619198 53 + 145441459 ---------CTTTGGACCTCATGTGTTCCTGAGTGCTTGTCTCCAACCTCTATGCTATTCTC i mm10.chr7 I 1422 C 0 s canFam3.chr1 19579267 34 - 122678785 CTCTGTGCCCTCTAGGTCCCAT-------------------TCCCGCTCCGT------C--- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=13733.000000 s hg38.chr19_GL949753v2_alt 80151 6 + 796479 CACTTA s panTro4.chr19 59013603 6 + 63644993 CACTTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655019 6 - 106955855 CACTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942748 6 + 59248254 CACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076444 6 + 51301725 CACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781624 6 + 50890351 CACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350249 6 + 49145316 CACTTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619251 4 + 145441459 CACT-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579301 6 - 122678785 CACTGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890017 51 + 60714840 I e rheMac3.chr19 59938563 661 + 64156825 I a score=147495.000000 s hg38.chr19_GL949753v2_alt 80157 71 + 796479 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG s panTro4.chr19 59013609 71 + 63644993 ACCCCCCAAAAAAGAGTTTTAAACCCTCCT-GTCTATAAGTAGGGATCCCAAGGTACCAAG-GATCCTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55890068 72 + 60714840 ACCCCACAAAAAAGAGTTTTAAATCCTCCTAGTCTATAAGTAGGGATCCC-AGGTACCAAGCGATCCTCCTGG i ponAbe2.chr19 I 51 M 933 s nomLeu3.chr10 102655025 71 - 106955855 ACCCCCCAAAGAAGAGTTTTAAACCCTCCT-GTCTGTAAGTAGGAATCCCGAGGTACCAAG-GATCCTCCTGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942754 69 + 59248254 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCTCAGGGTACCAAG-GATCCTCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076450 69 + 51301725 ACCCCCCGA--AAGAGTTTTAAGCCCTCCT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781630 69 + 50890351 ACCCCCGAA--AAGAGTTTTAAGTCCTCTT-GTCTATAAGTAGGGATCCCAGGGTACCAAG-GATCCTCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350255 70 + 49145316 ACCCCCCAAAAAAGAGTTTTAAACTCTCCT-ATCTAGAA-TAGGGATCCCAAGGTACCAAG-GATCTTCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3619255 60 + 145441459 ----CTCAG------GATTTACACTGACCC-AGGT-TAAGTGGGGATGGTTGAGTGCTGAG-GACCCACCAAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19579307 36 - 122678785 ------------------------------------TAAGTGGGGATCTCAGAATGCCATG-GGGTTTCCTGG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59938563 661 + 64156825 I a score=47600.000000 s hg38.chr19_GL949753v2_alt 80228 47 + 796479 ACGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTGCGCACTTTATCTTCC s panTro4.chr19 59013680 47 + 63644993 ACGTGCTGGCCCTCTCTACTGCCCT-CCCGCTTCGCACTTTATCTTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655096 47 - 106955855 AGGTGCTGGCCCTCCCTGCTGCCCT-CCCCCTTCGCACTTTATCTTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54942823 39 + 59248254 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076519 39 + 51301725 ------AGGCCCTCCCCGCTGCCCT-CCCGCTTTGCAGTTTATCTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781699 39 + 50890351 ------AGGCCCTCCCCGCAGCCCT-CCCGCTTTGCAGTTTATCTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350325 35 + 49145316 AGGTGCTGGCCCTCCCC-------------CTTTGCACTTTATCTTCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619315 36 + 145441459 ------GGGCCCTACTGGTTGTGCTGGCCTTTTCTCGCTCCC------ i mm10.chr7 C 0 C 0 s canFam3.chr1 19579343 47 - 122678785 AGGGGCAGGACCTCCCCGCTCCCCT-CCTCCTAAGTACCTGACTCCTA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59938563 661 + 64156825 I a score=771947.000000 s hg38.chr19_GL949753v2_alt 80275 293 + 796479 CTTTGCCAAGGCTCACCTTCT---CTTCCCCTCTCTTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGCGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCCGGACCCCCC---GTTCCATTTTTT s panTro4.chr19 59013727 294 + 63644993 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCCCCGGAATAGGCCCAGCCTCCCTGTGCTGGGGTAA---------GGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC--TGTTCCATTTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655143 293 - 106955855 CTTTGCCAAGGCTCAGCTTCT---CTTCCCCTCTCCTC---AGAGCCACCTTCCCCTGGGCCTCACCCCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGCCATGATCAACAGGGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAG--------------GCAGGGATCGCTGGCATAGGCCCAGCCTCCCTGGGCTGGGGTAA---------CGGCAGTTATGGGCAGGTCTTTCCTAAGCAGTTATCAGAGATTCTGCAGTGGTGCCTGGACCCCCC---ATTCCATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939224 295 + 64156825 CTTTGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CCGTTCCATTTTTT i rheMac3.chr19 I 661 C 0 s macFas5.chr19 54942862 292 + 59248254 ---TGCCAAGGCTCAGATTCT---CTTTCCCTCTCCTC---AGAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCCG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTTTTT i macFas5.chr19 C 0 I 319 s papAnu2.chr19 47076558 290 + 51301725 ---TGCCAAGGCTCagattct---ctttccctctcctc---agaGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATACTTATGCCCACATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACGAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCGCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTTCCC---GTTCCATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46781738 292 + 50890351 ---TGCCAAGGCTCAGATTCC---CTTCCCCTCTCCTC---AAAGCCACCTTCCCCTGGGGCTCACCCCTGTGTCTCTCCACAGCTATAATTATGCCCGCATTCAGCCCCTACGTCAAGTACTCCATCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTGAGTAGGGGCCAG--------------GCAGGGATCCCTGGGATGGGCCCAGCCTCCCTGTGCTGGGGTAG---------GGGCAGTTACGGGCAGCTGTTTCCTGAGCAGGCATCAGAGATTCAGCAGTGGTGCCTGGATTCCCC-CTGTTCCATTATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350360 288 + 49145316 CTTTGCCAAGGCTCAGCCTCT---CTTCCCCTCTCCTC-AGAGAGCTGCCTTCCCCTGGGCCTCACACCTGTGTCTCTCCACAGCTGTAATTCTGCCCCCAATCAGCCCCTACTTCAAGTACTCTGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGGTAAGTGGGGGCCCT--------------GCAGGGAT-----------------GCACCCTGTGCTGGGGCGGGGTGGGGCCGGGCTGGTATGGGTGGGTCTTTCCTAAGCAGGGGTCAGACAT--AGCAGTGCTGCCTGTACTCCCCCCTGCTCAACTTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3619351 212 + 145441459 TTTTGCCAGGGCTTTTTCTAC---CCTTTCCCCACCCCTGGAGAGCTACTTCATCCTGGGGT---CTTTTGTCTTTCTCCACAGCTATAATTATGCCCATGATTAGCCCCTACACCAAGTATGCTAGCATGATCAACAAGGCCACACCCTACAACTACCCAGGTGAGCAGGGA-----------------------------------------------CCTGTGTTGGGGGGA---------GGGC------------------------CAGACATCTG------TGTAGGAGAGTCCTTA--------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579390 299 - 122678785 GTTTGCTGAGGTTCAGCTTCTGCCCCTCCCCTGTCCTG---AAAGCCACCTTCCCCTGGGCCTCACCC----GTCTCTCCACAGCTGTGATTCTGCCCATCTTCAGTCCCTTCACCAAATATGCCACCATGATCAACCAGGCCACACCCTACAACTATCCAGGTGAGTGGGAGCTGGAGGGCTGGCCCAAAGCAGGGGT-GGAGGGTGAGGAGGGACCTTCCTGCGCTGGGGGAG---------GAATAATCATGGGTAGGTTCTTCCTCAGCAAGGATCTGAGAACCTGCTGTATGGACTGGACTTTCT---------TTTTTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=60685.000000 s hg38.chr19_GL949753v2_alt 80568 25 + 796479 AAGAATTGAGATATAATTCGTATAC s panTro4.chr19 59014021 25 + 63644993 AAGAATTGAGATATAATTCGTATAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655436 25 - 106955855 AAGAATTGAGATATAATTCGTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939519 25 + 64156825 AAGAATTGAGATATAATTCGTATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943473 25 + 59248254 aagaaTTGAGATATAATTCGTATCC i macFas5.chr19 I 319 C 0 s papAnu2.chr19 47076848 25 + 51301725 AAGAATTGAGATATAATTAGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782030 25 + 50890351 AAGAATTGAGCTATAATTCGTATAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350648 25 + 49145316 AGGAATTGAGCTCCAATTCCTATAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3619563 25 + 145441459 ATGCATTGAAATGTTCTTTGTCCAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579689 19 - 122678785 ------TGAGATCTGATCCATGTGC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=19457.000000 s hg38.chr19_GL949753v2_alt 80593 11 + 796479 TATTCTGTGTT s panTro4.chr19 59014046 11 + 63644993 TAGTCTGTGTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655461 11 - 106955855 TATTCTGTGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939544 11 + 64156825 TATTCTGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943498 11 + 59248254 TATTCTGTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076873 11 + 51301725 TATTCTGTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782055 11 + 50890351 TATTCTGTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350673 9 + 49145316 TGCTCTGTT-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619588 11 + 145441459 GCTTttttttt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M a score=1207.000000 s hg38.chr19_GL949753v2_alt 80604 9 + 796479 ---TGTGCT-----TCG s panTro4.chr19 59014057 9 + 63644993 ---TGTGCT-----TCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655472 14 - 106955855 ---TGTGCTTTCAGTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939555 9 + 64156825 ---TGTGCT-----TCG i rheMac3.chr19 C 0 I 15 s mm10.chr7 3619599 9 + 145441459 tcctttcct-------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C a score=27502.000000 s hg38.chr19_GL949753v2_alt 80613 132 + 796479 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga s panTro4.chr19 59014066 132 + 63644993 ---t-ttttgtttttttgg----gtttttttgagacagagtctcgctctgtcgccaaggctggagtgcagtggcgcgatctcagctcactgcaagctc--------------------------------agcctcccgagtagctgggactacaggtgcccgccaccacga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655486 169 - 106955855 ---TGttttgttttttttgttttttttttttgagacagaattttgctctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctccgcctcctgggttcacaccattctcctgccttagcctcccaagtagctgggactacaggcacccgccaccacga i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619608 71 + 145441459 tttc-ttttcttttcttttttcttttcttttgagatagggtttctctgtgtagccctggctg----------------------------------tc----------------------------------------------ctgtaact-------------------- i mm10.chr7 C 0 C 0 e canFam3.chr1 19579708 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=4172.000000 s hg38.chr19_GL949753v2_alt 80745 45 + 796479 cacgcaaactttttcgtatttttttagtagaggcggggtttcacc s panTro4.chr19 59014198 43 + 63644993 catgcaaattttttcgta--tttttagtagaggcggggtttcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655655 43 - 106955855 ccagctaatttttttgta--tttttagtagagacggagtttcacc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619679 11 + 145441459 --------------------cacttagtaga-------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19579708 32 - 122678785 CATAAAAATCATTTCCTGTCTGTTT-------------TTGCACT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=34764.000000 s hg38.chr19_GL949753v2_alt 80790 98 + 796479 gtgttagccaggattgtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggtgtgagccaccg-cgcctggcc s panTro4.chr19 59014241 98 + 63644993 gtgttagccaggatggtctcgatctcctgaccttgtgatccactcacctcggcctcccaaagtgctgggattacaggcgtgagccactg-cgcctggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655698 98 - 106955855 atattagccaggatgctctcgatctcctgaccttgtgatccactcgcctcggcctcccaaagtgctgggattacaggcgtgagccaccg-cgcctggcc i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3619690 84 + 145441459 -------ccaggctggccttgaactca-------gaaatccacctgcctctgcctccc-aagtgctgggattgaaggggtgcaccaccaccgcccagtt i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e calJac3.chr22 45350682 0 + 49145316 C e chlSab2.chr6 46782066 0 + 50890351 C e papAnu2.chr19 47076884 0 + 51301725 C e macFas5.chr19 54943509 0 + 59248254 C e rheMac3.chr19 59939564 15 + 64156825 I a score=6636.000000 s hg38.chr19_GL949753v2_alt 80888 5 + 796479 TGTGC----- s panTro4.chr19 59014339 5 + 63644993 TGTGC----- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655796 5 - 106955855 TGTGC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943509 5 + 59248254 TGTGC----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076884 5 + 51301725 TGGGC----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782066 5 + 50890351 TGTGC----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350682 5 + 49145316 TGTGC----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3619774 10 + 145441459 TGTCCACACT i mm10.chr7 C 0 C 0 e canFam3.chr1 19579740 0 - 122678785 C e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=65229.000000 s hg38.chr19_GL949753v2_alt 80893 37 + 796479 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCTCTC s panTro4.chr19 59014344 37 + 63644993 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTATCTCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655801 37 - 106955855 TTCGAGTTTCTATTAC-----CTTTCCAGATTTCTGTCCCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54943514 21 + 59248254 TTCGAGTTTCTATTAC-----CTTTC---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076889 37 + 51301725 TTCGAGTTGCTATTAC-----CTTTCCACATTTGTGTCCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782071 37 + 50890351 TTCGAGTTTCTATTAC-----CTTTCCACATTTCTGTCCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350687 36 + 49145316 TTCCAGTTTCCATTTC-----C-TTCCAGgtttctgtccctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3619784 42 + 145441459 TTTAAGTTACCCTAACATGCTCTCTCCAGATTTCTGTTCATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19579740 37 - 122678785 TTTGAGTTTCTGTTGT-----CATTCCAGATTTGTATTCCTT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M e rheMac3.chr19 59939564 15 + 64156825 I a score=618503.000000 s hg38.chr19_GL949753v2_alt 80930 297 + 796479 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCTC-TAGTGCGCGGGAtctct------------------------ccctcg----ctatctctctggttttccgtgtctctcagtctctgtatttcccgcctctttctGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA s panTro4.chr19 59014381 295 + 63644993 TCTGGGTTCCCATCTGTGGTGGTTTCTCGGTCTCCATCTTCTCAGGTTTCTGTCCTGTTTCCCCATCTC--TTGACCCTAGCTCTC-TAGTGCGCGGGATCTCT------------------------CCCTCA----CTATCTCTCTGGTTTTCCGTGTCTCTCAGTCTCTGTATTTCCCGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGCCCCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102655838 290 - 106955855 TCTGGGTTCCCATCTGTGGTGGTTTCTTGGTCTCCATCTTCTCAGGTTT------------CCCATCTCTTTCGACCCTCGCTCTCTTCGTGCGTCGGAtctct------------------------cgctcgctgtctatctctctggttttccatgtctctcagtctctGTATTTCCAGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCC---TCTCACCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCAACAGACCAGCTCTTCTCTCCAGGGCCCTGGAGACGTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939579 286 + 64156825 TCTGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGctcgc-tctcg------------------------------------ctctct----ctctctctctggttttccatgtctctcagtctctgtatttcctgcctctttctgcatcactgattctctgacccttcccctcatctcagccctcgg--gccccccttctctctctGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i rheMac3.chr19 I 15 C 0 s macFas5.chr19 54943535 280 + 59248254 --TGGGTTCCCATCTGTGTTGTTTTCT--GTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCctagctcgc-t----------------------------------------cgctcg----ctctctctctGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAAAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47076926 302 + 51301725 TCTGGGTTCCCACCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCTGTCCTGTTTCCCCATCTCTTTCGACCCTAGCTCGC-TCTCGCGCAGGCTctca----------------------cttgctct----ctctctctctggtcttCCATGTCTCTCAGTCTTTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGacccttcccctcctctcagcCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTGTGGAGACATGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782108 302 + 50890351 TCTGGGTTCCCATCTGTGTTGTTTTCTCGGTCTCCATCTTTTCAGGTTTCGGTCCTGTTTCCCCATCTCTTTTGACCCTAGCTCGC-TCTCGCGCAGGCTCTCA----------------------CTTGCTCT----CTATCTGTCTGGTTTTCCATGTCTCTCAGTCTCTGTATTTCCTGCCTCTTTCTGCATCACTGATTCTCTGACCCTTCCCCTCCTCTCAGCCCTGGG--GTCCCCCTTCCCTCTCTGAACATAGAGCGACAGACCAGCTCTTCTCTCCAGGACTCTGGAGACTTGCTGGTCTCAGTGGCCCA-CCTCCTGTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45350723 323 + 49145316 tctgggttgctgtctgtggagttctctcggtctccatctttacgggtttctgtcctgtttccccatctgttttgggggtctgtctc-tgtctcaccggttttccatgtctccagttttccatgtctctcggtct----ccatctctctggttttccatgtctctcggtctctgtctctCCCTGACTCTTCTGCATCACCGATTCTCCGATCCTTACCCTCCTCTCACCCCCTGGCATCTCCCTTTCCCTCTGTGAATATAAAGCGACCAA-CAGCTCTTCTCTCCAGG-CCCTGGAGACGTGCTGGTCTCAGCGGCCC--CCTCCTGTCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619826 171 + 145441459 -----------------------------------------------------------TCCCAGTTCCTTT---------CTCTC-TGTTG---GAGAGATCT------------------------CCCTCA----C-------------TTCCCTGTGTCTTTGCGTCTGT------------------------TGAATCTCTGGCCCTCACTTTCCTTTT-TCCCTGGA-----------------------ATACAGACACAAACCAGCTGTTTTCTCCAGGACTCTGGAGAGCTGCTGCTCTCAGTGGCGCATCCTTCTGTTTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19579777 208 - 122678785 ------------------------TCTGGACTTTTGTCATTCTAGGTGTCTGTCCTGTT----------------------------T--------------------------------------------------CTGTCTCTCTGCTTTTCCGTACCTCCAGGTCTCTAT-CTCCCTGCTTCTCTCTGCATC-------------CCCTCTCTCACCTCTC--CTCTGGG--GTCCCATTTCTCTCTTTGAGTCCAAACTGACAGACTAGC----CTTTATGGGCCTCCCAAGACCTGTTGGTCTCAATGGCCCACCCTCCTGCCCCA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55890140 933 + 60714840 M a score=653025.000000 s hg38.chr19_GL949753v2_alt 81227 154 + 796479 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA s panTro4.chr19 59014676 154 + 63644993 CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891110 154 + 60714840 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACATGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i ponAbe2.chr19 M 933 C 0 s nomLeu3.chr10 102656128 154 - 106955855 CAGTGCCCGTCCGCGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTCCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAAAACCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59939865 154 + 64156825 CAGTGCCCGCCCGTGATGATGGGAACATGCCGGACGCTCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCCGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCACCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943815 154 + 59248254 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTTAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077228 154 + 51301725 CAGTGCCGGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAAGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GAGGCGGCCCCTCCCACG--GCTC-CCAATAAAAATGTGAACACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782410 154 + 50890351 CAGTGCCCGTCCGTGATGATGGGAACATGCCGGACGTGCCCAGCCACCCCCAGGACCCTCAGGGCCCCAGCCTGGAGTGGCTGAAGAAACTGTGAGCACCTTCACTGACA--GTGGCGGCCCCTCCCATG--GCTC-CCAATAAAAATGTGAAAAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351046 150 + 49145316 CAGTGCCTGTCCGCGATGATGGGAACATGCCCGACATACCCAGCCACCCCCAGGACCCCCAGGGACCCAGCCTGGAGTGGCTGAAGAACCTGTGAGCACCTCCACTGACC--AAGGCG----CACCCTCA--GCTC-CCAATAAAAATGTGAAAACCAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3619997 157 + 145441459 CAGTGCCTGTGAGAGATGACGGGAACATGCCTGATGTGCCCAGCCACCCTCAGGATCCTCTGGGTCCAAGCTTGGACTGGCTGAAGAACCTGTGAATGCCTCTGCTGATG--GAAGAGGCCCCTTCCCTGTTGCTCTCCAATAAAAATGTGAAAACTAA i mm10.chr7 C 0 I 105 s canFam3.chr1 19579985 154 - 122678785 CAGTGCCCCTCCGAGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGTCTGGAGTGGCTGAAGAAATTGTGAGCACCTCTGGTGACATGGAGGTGGCCCCTTCC-CT--GTAG-TCAAT-AAAATGCATAGAGTGA i canFam3.chr1 C 0 C 0 a score=720995.000000 s hg38.chr19_GL949753v2_alt 81381 177 + 796479 CCCCCGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTATTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG s panTro4.chr19 59014830 177 + 63644993 CCCAAGAACGTG-AGCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GCGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891264 177 + 60714840 CCCCAGAACGTG-AGCATGCGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656282 175 - 106955855 CCCCAGAACGTG-AGC--GTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCGGGGTGAGTGT------G-GGGTCGGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGGGTCAGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940019 176 + 64156825 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54943969 176 + 59248254 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTATTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077382 176 + 51301725 CCCCAGAGCGTG--GCATGTGTGTGATCAGAGGTGGGAACAAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTGGCCAGAGTTGGGTAGGGCAGCAGTTTATCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCCTCATCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782564 176 + 50890351 CCCCAGAGCGTG--GCATGTGTGTGATCAGCGGTGGGAACCAGTAGACGGTGGCCAGGGTGAGTGT------G-GGCTCAGTTTACTGGGCAT----GGGTCAGTCAGAGGCTGGGCTAGCCAGAGTTGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAGCTGGAATCCAGGGCTTCATCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351196 176 + 49145316 CCCCAGAATGTG-AGCATGTGTGTGATCAGAGGCGGGAACAGG-AGACGGTGGCCAGGGTGAGTGT------G-GGGTCAGTTTACTGGGCGT----GGGTCAATCAGAGGGTGGGCTGGCTAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGACACCCAACTGGAATCCAGGGCCTCGTCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3620259 184 + 145441459 cctccaacccTGGAACCTGGATATGATCAGAGGTGGGAGCAA-TAAACGGTGACCTAGACAAGTGTACATAGG-GAATCTGTTTATTGGGGAG---AGGGTTAGTCAAAGGGTGGGCTGGCCAGGGTAGGGTAGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTG i mm10.chr7 I 105 C 0 s canFam3.chr1 19580139 174 - 122678785 CCCCAGCATCTG-AGCTTGAGTGTGATCAGAGGTGGAAACA--------GTGGCCAAGGCGAGTCT------GCCGGTGAGTTTATTGGGGGTGGGGGGGTCAGTCAAATGGGGGACTGGCTAGGGTGGGGTAGGGCAGCAGTTTGTCTGGCCCCCGAGAAACCCAACTGGAGTCCAGGGCCTCATCTG i canFam3.chr1 C 0 C 0 a score=269691.000000 s hg38.chr19_GL949753v2_alt 81558 80 + 796479 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA s panTro4.chr19 59015007 80 + 63644993 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891441 80 + 60714840 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAAGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656457 80 - 106955855 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTGCAGGAGATAAGGAACAAGGTGTTAACAGGCCTGGGAATCTAGAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940195 80 + 64156825 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944145 80 + 59248254 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077558 80 + 51301725 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAGAAGGAACAAGGTGTTAATAGGCCTGAGAATCCAGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782740 78 + 50890351 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAG--GAGAAGGAACAAGATGTTAATAGGCCTGAGAATCCAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351372 75 + 49145316 CTTCAAAGCCAAAGTCTTCCTCGACCTTAATCTGCAGGAGAT----AACAAAGTGTTAGTCAG-CTGGGAATCTAGAAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3620443 78 + 145441459 CTTCAAAGCCAAAGTCTTCCTCAACCTTAATCTG-AAAAGATACGGAACAAGATGCGAG-GGATATGGAGACCCAGGAGA i mm10.chr7 C 0 I 207 e canFam3.chr1 19580313 0 - 122678785 C a score=301312.000000 s hg38.chr19_GL949753v2_alt 81638 118 + 796479 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc s panTro4.chr19 59015087 126 + 63644993 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagactctttaaagagactccactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891521 116 + 60714840 TCCCATCAGCTTCACCAtttttgttttcattttgttttgattttt--agagac-------agggtct-cactctgttgcccaggctggagtgcagtggtgccatcatagttcactgcagcctctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656537 118 - 106955855 TCCCATCAGCTTCACCAtttttgttttcattttgttttgctttttaaagagac-------agggtct-cactctgttgccccggctggagtgcagtggtgccatcatagttcactgcagcctctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59940275 100 + 64156825 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944225 100 + 59248254 TCCCATCAGCTTCACCAtttttgtttttgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077638 100 + 51301725 TCCCATCAGCTTCAccatttttgttttcgttttgttttgatttttaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782818 100 + 50890351 TCCCATCAGTTTCACCAtttttgttttcattttgttttgattttcaaagagac-------agggtct-------------------ggagtgcagtggtgccatcacagttcactgcagcctctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351447 118 + 49145316 TCCGATCAGCTTCACTGttttcgttttcattttgtttcgatttttaaagagac-------aggccct-cactctgttgcccaggctggagtgcagtggtgccatcatagtttactgcaggctctgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I e canFam3.chr1 19580313 0 - 122678785 C a score=1224062.000000 s hg38.chr19_GL949753v2_alt 81756 444 + 796479 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcctcaagtgatcctcccacctaggcctcccaaagtgccgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTGCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCTTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA s panTro4.chr19 59015213 440 + 63644993 ctcccaggctcaagtgatcctcccacctcagcttcccaagtagctgggactacaggcacttgccaaccaagcctaacatg-ttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcagactcctggcatcaaatgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCACAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCACACTGGGccttcccttccactccgtcttctc------------tga----tccttctcctctactcccagccttctcta-------gctatttttccttctccaggtcttcctctttccctttcCAACTTTGCC-TCCTTTTC-ACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55891637 452 + 60714840 ctcccaggctcaagtgatcctcccatctcagcttcccaagtagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcctcccaaagtgctgggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCTTTACACCTCAGAGGCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCATCTTCTC------------TGATCCTTCCTTCCCCTCTACTCCCAGCCTTCTATAGCTATCTGCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGTC-TCCTTTTT-ACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102656655 433 - 106955855 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaaccaagcctaacatgtttttttctttt--------------tggtagagatggg-gtctcagtatgttgctcaggcaggtctcaaactcctggcatcaagtgatcctcccacctaggcc------------gggattacaggcatgagccactgcacctggccAGCCTCGCAGTTCTTGTCTTCCCAGGCCAGTCACCTTCCTCCTTACACCTCAGAGGCAACCCCAGTGTTCCTGGGTCCAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACTCCGTCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCCAGCCTTCTATA-------GCTATTTTTCCTTCTCCAAGTCTTCCTCCTTCCCTTTCCAACTTTGCC-TCCTTTTT-ACCCA i nomLeu3.chr10 C 0 I 284 s rheMac3.chr19 59940375 455 + 64156825 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtggtcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944325 455 + 59248254 ctcccaggctcaagtgaccctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccAGCCTCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTCCGGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTCTGATCCTTCCTTTGATCCTTCCTTCTTCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCC--TCCTTTC-ACCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47077738 454 + 51301725 ctcccaggctcaagtgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcATGCctaacatgtttttttctttt--------------tggtagagatgggagtcacagtatgttgctcaggctagtctcaaactcctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacagacatgggccactgcacccggccagcctCACCGTTCTTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTT-CTGGGCACAGATGTTCTTCCAGCTTTCCTCCCCGCACTGGGccttcccttccaccccatcttctctgatccttcctttgatccttccttcttctctactcctAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAggtcttcctccttccctttccaacTTTGCC--TCCTTTC-ACCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46782918 445 + 50890351 ctcccaggctcaaatgatcctcccacctcagcttcccaagcagctgggactacaggcacatgccaatcatgcctaacatgtttttttcttgt--------------tggtagagatgggagtcacggtatgtcgctcaggctggtctcaaactgctggcatcaagtgatcc-cccatgtaggcctcccaaagtgctgggattacggacatgggccactgcacccagccAGCCTCACCGTTCGTGTCTTCCTAGGCCAGTCACCTTCCTCCTCACACCTCAGA-GCAATCCCAGTGTTCCTGGGTCCAGATGTTCTTTCAGCTTTCCTCCCCGCACTGGGCCTTCCCTTCCACCCCATCTTCTC------------TGATCCTTCCTTCTCCTCTACTCCTAGCCTTGTCTA-------GCTATTTTTCCTTCTCCAGGTCTTCCTCCTTCCCTTTCCAACTTTGCCCTCCTTTTC-ACCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45351565 453 + 49145316 ctcccaggctcaagtgatcctcccacctcaccctcccaagtagctgggactacaggcacgggccaaccaagccgacccttttttttttttttttttttttctttcctggtagagatgag-gtctcagtatgttgctcagggagatctcaagctcttggcctcaagtgaacctccctcctgggcctcccagagtgctgggattacaggcctgagccactgcacctggccATCCTCACTGTTCTAGTCCTGCCAGGCCGGTCGGCTTCCTCCTTATACCTCAGAGGTAATCCCAGTGTTCCTGGGTCCAGATGCTCTTCCGACTTTCCTCCCCTAACT-GGccttctcttccgccctctctt---------------tgacccctccctctcctctcctcccagccttctcca-------gtta-ctttccttctccaggtctt-ctccttccctttcCAACTTTGCC-TCCTTTTCTACCC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580313 235 - 122678785 CTTCGAAGCCAAAGTCTTCCTC-------------------------GAC---------------------CTTAATCTG--------------------------GGGGAGAGAAGGA-GCCA---------GCGTAAGCAGGCCTAGAAT--------------------CTCGAGAAGGCC-------------------CAG---------------------CAGCTTCACCATTC--AACCTCC--------TCAACTTCCTCTGTGCACCTGGGA-GAAATCCCAATGGTCCC--------------------------------------ACCTTCCCTTCCAC-CCATGTTCTC------------TGA-CCCTCCTGCTA-------CCCACCCACCCCCA-------GCT--------TCCTCCAGATCGCTCTCCTTCCTTTTCCATCCA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=512570.000000 s hg38.chr19_GL949753v2_alt 82200 197 + 796479 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG s panTro4.chr19 59015653 197 + 63644993 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---TCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTAACTCAGCCCCAGCCCT------GGCCCCTCCCCTTGAGTCCCCC-CTCC---TTACCTGCACTGGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892089 204 + 60714840 AGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACATGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAGCTCTGAACTTGActcagccccagccctggccccggcccctccccttgagtcccccgctcc---ttacctgcactagcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657372 204 - 106955855 aGCCTTTACCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACGTCCTGGTTCACCTCCCTTCTCCAACTTTCCCCAGCCCTGGGCCCCTCGGGGTGCAGAACCAAAACCCAAGAgccctgaacctgactcagccccagccctggccccggcccCTCCCCTTGAGTCTCCCCCTCC---TCACCTGCACTGGCG i nomLeu3.chr10 I 284 C 0 s rheMac3.chr19 59940830 202 + 64156825 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944780 202 + 59248254 AGCCTTTGCCCCACTTTTTCCAAATA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGACCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCAG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTGCACCGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078192 208 + 51301725 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGGCCTCCTCCAGCACATCCTGGTT-ACCTCCTTTCTTCAACTTCCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTCGG-CCCAGCCCTGGCCCTAGCCCCTCCCCTTGAGTccccccccccccGTCACCTGCACCGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783363 203 + 50890351 AGCCTTTGCCCCACTTTTTCCAACTA------CTTCCCTGCCTGATCCTAGG---CCTCCAACACATCCTGGTT-ACCTCCTTTCTTCAACTTTCCCCAGCCCTGGGCCCCTCAGGGTGCAGAACCAAAACCCAAGAGCCCTGAACCTGACTTGGCCCCAGCCCTGGCCTCAGCCCCTCCCCTTGAGTCCCCCCCTCC---TCACCTCCACCGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352018 123 + 49145316 AGCCTTTGCCCCACTTTTTCCAGCTA------CCTCCCTGCCTGATCCTAGG---CTTCCAACACTTCCTGTTTCACCACCTTTCTCCAACTTG-CCCAGCC----------------------------CCCAAGAGCCCTGAACTTGATTCCG-CCCAGC------------------------------------------------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19580548 158 - 122678785 AGCCCTCACCTGGCTTCTTCCAGCTCTTTATTCTTCCCTGCCCA-----------CCCCCACCTCTCCCAGCCCCACCTCCTTTCTCCAGTTGTCCCTtgccctgagctt---------------------------gtcctgagcct------------gccctgagcctgAATGCTCTAC--AAGGCCCAGCTCCC---ACAACACTGCTG--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3620521 207 + 145441459 I a score=2615560.000000 s hg38.chr19_GL949753v2_alt 82397 761 + 796479 CCGGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCACCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGTCTCTTTCTCTGGAGGCTCATTCTCCGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGCAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCc--------tggagccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcaaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttataa-t s panTro4.chr19 59015850 761 + 63644993 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCGC-CTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGTGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCGGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAATGTCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCCGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AACGGAATAACTT-ATCTCCTAGCGGCTGGGGAAAAGGGCCACAGGATAGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCTGTCC--------tggagccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcaagcaagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagcggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcaTATGTGAGTTATAA-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55892293 819 + 60714840 ccagctctggagctccagtccctccccttgagtccctgcctcctcacctgcactggcaccagctctggagtcccagtcccTCCCCTTGAGTTCCCAC-CTTC----CTCACCTGCACTGGGGTCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCCCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGGGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTGACCCTGCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGAATAACTT-ACGTCCTATCAGCTGGGGAAAAGGGCCACAGAATCGAGCTCAGCTCCCACTCCACTCAACGCCAAAGCCGTCC--------tggacccagacggtcctgagctctggcattggaggcctgggagccatgcc-cttgaccagccttgagacctcgagccagacaaggcgaccattctgaggctgagtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcaatggtgacactgaagtagtgacaccagacgatttct----gta-----cttaatgtga-tgtcagc---acttagtaaacattcatatgtgagttgtaa-a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102657576 760 - 106955855 CCAGCTCTGGAGC----------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTCCCAC-TTTC----CTCACCTGCACCGGGGCCAGCTCTGGAGTCAGCGCATTTCCTGCTCGGCGTCCATCTCGTGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGGGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGGGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGGGGGAGGTAGGTGATGGGTGGGTCCTGA--------------GCTCCCAGT--TCCTTACCCTCCTGGAGGCCCAACACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGCAGAAGCCACC---AATGGAATAACTT-ATCTCCTAGCAGCTGGGGAACAGGGCCACAGGATAGAGCTCAGCTCCCACTCCGCTCAGCGCCAAAGCTGGCC--------tggacccagacggtcctgagctctggcactggaggcctgggagccatgcc-cttgaccagccttgagacctcgagcaagacaaggcgaccattctgaggct--gtttcctgctctgc--aaacgaca--tgacaccctc-----ggctggatgttgcagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttaacatga-tgtcagc---acttagtaaacattcatatgtgagttataatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941032 765 + 64156825 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------TGGACGCAGACGGTCCTGAGCTCTGGCATTGGAGGCCTGGGAGCCACGCC-CTTGACCCGCCTTGAGACCTCAAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54944982 765 + 59248254 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCCCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGTGCAGTTCCCACTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCCGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAGGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGACCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACCCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTCAGTT-ACCTCCTAGCAGCT-GGGAAAAGGGCCACAAGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCc--------tggacccagacggtcctgagctctggcattggaggcctgggagccacgcc-cttgacccgccttgagacctcaagcaagacaagacgaccattctgaggctgagtttcctgctctgc---aaCGACG--TGAAACCCTCACCTGGGCTGGATGTTGCAGTGGTGACACCGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTGCTGTGA-TATCGGC---ACTCAGTAAACATTGATATGTGAGTTATCA-T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47078400 766 + 51301725 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCGCTCCCCTTGAGTCCCCTCACTTC----CTCACCTGCACTGAAGCCAGCTCTGGAGTCAGCGCAGTCCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGCGGGGAAGAGGGGGAGGTAGGTGATGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCCCCTGGAGGCCCAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGGGGAGAAGCCACC---AATGGACTAAGTT-ACCTCCTAGCAGCTGGGGAAAAGGGCCCCAGGATAGAGCTCAGCTCTCACCCTACTCAACACCAAAGCTGTCC--------TGGACCCAGACGGTCCTGAGCTCTGGCACTGGAGGCCTGGGAGCCACGCC-CTTGACCAGCCTTGAGACCTCCAGCAAGACAAGACGACCATTCTGAGGCTGAGTTTCCTGCTCTGC---AACGACA--TGAAACCCTCAACTGGGCTGGATGTCGCAGTGGTGACACTGAAGTAGTGACACCAGACGATTTCT----GTA-----CTTACTGTGA-TGTCGGC---ACTCAGTAAACGTTGATATGTGAGTTGTCA-T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46783566 758 + 50890351 CCAGCTCTGGGGC----------------------------------------------------------CCCGGTCCCTCCCCTTGAGTCCCCCGACTTC----CTCACCTGCACCGAAGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGGCGTCCATCCCGCGGCACTCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCGGGCGCTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTGGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTGCCTGGGGTGGGAGCATCCGTGCCCTGGCTGCCCTCATCCTGGTGGGGAGGAGGGGGAGGTAGGTGAAGGCTGCGTCCTGG--------------GCTCCCAGT--TCCTGACCCTCCTGGAGGCCGAACACTCACCTCTAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCATAGGAGTCCAGCACTCTCATGAGGAACCTGCTC-GGGGGAGAAGCCACC---AATGGAGTAAGTT-ACCTCCTAGCAGCT-GGGGAAAGGGCCACAGGATAGAGCTCAGCTCTCACCCCACTCAACACCAAAGCTGTCC--------tggacccagacggtcctgagctc------tggaggcctgggagccacgcc-cttgaccagccttgagacctcaagcaagacaagacgaccattctgaggctgagtttccagctctgc---aaagaca--tgaaaccctcaactgggctggatgttgtagtggtgacactgaagtagtgacaccagacgatttct----gta-----cttattgtga-tgtcggt---acttagtaaacattcatatgtgagttatca-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45352141 709 + 49145316 -----------------------------------------------------------------------CCCAGTCCCTCCCCTTGAGTTTCCCC-CTTC----CTCACCTGCACTGGTGCCAGCTCTGGAGTCAGCGCAGTTCCTGCTCGACGTCCATCCCGTGGTACTCGCCTCCTCTTCCGCCCACTGGGCCCCTCGACGGGGACTGGGCTGCCAGGTTCTGGGGGTGCAGGAGTCCTTCTCGGCGGGGACAGTGCCTCTTTCTCTGGAGGCTCATTCTCAGCATTACCTGGGGTGGGAGCATCTGTGCCCTGGCTGCCCTCATCCTGGCAGGGAGGAGCAGGAGGTGGGTGATGG-TGTATCCTGG--------------GCTTCCAGT--GCCTGACCCTCCTGGAGACCCAGCACTCACCTCCAGCACAATGGTGAACTGGCTGGCCCGGTAGTCATCCCCGTAGGAGTCCAGCACTCTCATGAGGAACCTGCTCAGGG--AGAAGCCACC---GATGGAATGAGTTAATCTCCTAGCAGTTGGGGAA---------------GAGCTCAGTTCCCGCTCCACTCGAAGCGAAAGCTGTCC--------TGGACCCGGGAGGTCCTGAGCTctggctttggaggcctgg---------------------------------agcgagacaaggcaaccattctgaggctgagtttcctgctctgc--agacgggc--tgacagccttgactgcactgggtgctgcagtggggacactgacgcagtgacaccagcggatttct----gtaaagtgcttcatgtgg-tatcggc---acttaggaaacgttcatatgggagttcGAt-t i calJac3.chr22 C 0 I 307 s mm10.chr7 3620728 682 + 145441459 CCAGCCCAGGATT----------------------------------------------------------CTCA---CCACGCCTTG-GCCCCAGC-CCTCGGCTCCCACCTGCACTGGGGCCAGTTCTGGAGTCAATGAAGCCCCCA------------CCCGTGGCGCCCGCCGCCTCTTCCGCCCACTGGGCCCCTCGCCAGGGGCTGGGCTGGTGGGGTCTAAGGTTGCAGTTGTCCTTTGGGATGGGGAAAGCCCCTCTTTCTCTGGAGGTTCATTCTCAGCATTGCCTGGGGTAGGGACATCTGTGCCTTGGCTGCCATCATCCTGGTAAGATGTAACATGGTGGCGGTTAAAGAC---TCCTGG--------------ATTCCCCATCCTCCCAACCTGCTTGGAGACC-AGAGCTCACCTCCAACACAATGGTGAACTGGCTATCTCGGTAGTCATCCCCGTAGGAGTCCAGCACCCTCATGAGGAACCTGTGTGGATGGAGATGCAGGC---ACTGAAA-ATCTT-ATCTTCTGA------GGGAGTACG--TAAAAGATA-AGTCCAGGTCTC------TTCAAT-CTAAAGTTCGCT--------TGAACTAGAAAGGTTTAGACCTCT-------GTAGCCTGAGCTC------------CCAGCCTGGGAACC------------AGTTGACC---------CCAAGTCTCCTACAC------AATGATAGGTGACATCCTTTACTGGGTTAGGTGCTGTGAAGGT-ATACTACA----------TAGACTATTCTCTAAAGTA-----CACAGTGTGATTGTTAGC---ATCTAGTAAACGTTCA------AATTGTAA-T i mm10.chr7 I 207 I 2 s canFam3.chr1 19580706 733 - 122678785 CAAAACCCAAGGC----------------------------------------------------------CCTGGT-----------------------------CCCACCTGTACCGGGGCTAGTTCTGGAGTGAGCACAGCTCCCGCTCGGCGTCCGTCCCGGGGTGCTCGCCGCCTCTTGCGTCCACTGGGCCCCTCCCCGGGGGTTGGGCTGCTGGGTTCTGGAGGTGCGGGTGTCCTTCGGGGTGGTGACAGCCCCTCTTTCTCTGGGGGCTCATTCTCAGCATTGCCGGGAGTGGGAGCATCTGTGCCCTGGCTGCCCTCGTCCTGGTGGGGAGAAG-GGGTGGCAGGTGAAGGCTGTGTCCTGGTGCCCTGTCCCCCCACACCCACC--CCCCTGCCTGCCAGGAGGCC--ATGCTCACCTCCAGGACTATGGTGAGCTGGCTGGCACGGTAGTCATCGCCATAAGCATCCAGCACTCTCATGAGGAACCTGCGTCCGGAGAGAGGCCATTGGGGAGGCACAACCTC-AGTATCTGGTGGTTGGAGAAAGGGGCGCCCG---ACAGCCCAGCCCCAGCTCA----GAAGCCAAGGCTGTCCCAGACCCATAAACCCAGAAGATTCAGAGCTGCCAAATCTGAGACCTGGTTGCCAAGTAGTTTGAGCAGCA-GGGGACATTGGGCCAGACCAGGGGACCTCTCTGCACCT--GTTTCCCGCTCTGTTGACAGGACA--CGACAGCCCTGAGTGGGTGGGCCACCTGAG-GGTGACACTGCA-------------------TCT----GGA---------GAGTGG-CATCTGCTGTGCTCAGCCCACGTTCTGGTGTCAGCTAT---- i canFam3.chr1 C 0 C 0 a score=38216.000000 s hg38.chr19_GL949753v2_alt 83158 17 + 796479 tTTTATTGATAACTGAA s panTro4.chr19 59016611 17 + 63644993 TTTTATTGATAACTGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893112 17 + 60714840 ttttattGATAGCTGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658336 17 - 106955855 ttttattGATAACTGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941797 15 + 64156825 TTTTATTGATCACTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945747 15 + 59248254 TTTTATTGATCACTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079166 15 + 51301725 TTTTATTGATCACTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784324 12 + 50890351 ttttattGATAA----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353157 17 + 49145316 TTTTTTTGATAACTGAA i calJac3.chr22 I 307 I 6 s mm10.chr7 3621412 17 + 145441459 TGGTAATGAAGACTGAA i mm10.chr7 I 2 I 2960 s canFam3.chr1 19581439 16 - 122678785 CTTTATTAGTAACTGA- i canFam3.chr1 C 0 C 0 a score=253793.000000 s hg38.chr19_GL949753v2_alt 83175 91 + 796479 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTTTTTCCCCAGCCCCTGCCTC-CAGAGTTCC s panTro4.chr19 59016628 91 + 63644993 GAGAGGGGAGTACAGAACGTTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTTTTCTTTCCCCAGCCCCTGCCTC-CACAGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893129 91 + 60714840 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCTCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658353 91 - 106955855 GAGAGGGGAGTACAGAACGCTCCTCCTAATGACCTCACCTCTTATAAACACCCCCTTCTCTTCTTTCCGCAGCCCCTGCCTC-CAGAGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941812 88 + 64156825 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54945762 88 + 59248254 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCACCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i macFas5.chr19 C 0 I 326 s papAnu2.chr19 47079181 88 + 51301725 AAGAGGGGAGTGCAGAACG---CTCCTAATGACCTCGCCTCTTATCAACAcccccttctcttctttccccagcccctgcctc-cagaagcct i papAnu2.chr19 C 0 I 327 s chlSab2.chr6 46784336 88 + 50890351 GAGAGGGGAGTGCAGAACG---CTCTTAATGACCTCGCCTCTTATCAACACCCCCTTCTCTTCTTTCCCCAGCCCCTGCCTC-CAGAGATCC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45353180 85 + 49145316 CAGAGGGGAGTGCAT-ACA---CTTCTGATGACCTTGCCTTTTATCAACACTGGCTTCTGTTTTT--CCCAGTCCCTGCCTC-CAGAGTTCC i calJac3.chr22 I 6 I 6 s canFam3.chr1 19581455 71 - 122678785 ---AGGGCAAGACAAAGAG---C--------------CCTCCTGCTGACATGACCTTCTCTGCTT-CCCTGGTCCCTGCTTCTCAGAGCTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I a score=79888.000000 s hg38.chr19_GL949753v2_alt 83266 48 + 796479 TTAAGGTTC-AATTGATGGA--ATGCCTCCTCTGCACCAGCACCTGGGC-AG s panTro4.chr19 59016719 48 + 63644993 TTAAGGTTC-AATTGATGGA--ATGCCTGCTCTGCACCAGCACCTGGGC-AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893220 49 + 60714840 TTAAAGTTCTAATTGATGGA--ACGCCTCCTCTGCACCAGCACCTGGAC-AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658444 51 - 106955855 TTAAAGTCCTAGTTGATGGAATATGCCTCCTGTGCACCAGCACCTGGGC-AG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941900 20 + 64156825 TTAGttttttttttt--------tgttt------------------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946176 49 + 59248254 TTAAAGCTCTAATTGATGGG--ATGCTTCCCCCGCACCAGCGCCTGGGC-AG i macFas5.chr19 I 326 C 0 s papAnu2.chr19 47079596 49 + 51301725 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCCGCACCAGCGCCTGGGC-AG i papAnu2.chr19 I 327 C 0 s chlSab2.chr6 46784430 49 + 50890351 TTAAAGCTCTAATTGATGGG--ATGCTTCCTCTGCGCCAGCGCCTGGGC-AG i chlSab2.chr6 I 6 C 0 s calJac3.chr22 45353271 50 + 49145316 TTAAAATTCTAATTGATGGA--ATGCTTCCTCTGCACCAGCGCCTGGACAAA i calJac3.chr22 I 6 C 0 s canFam3.chr1 19581526 31 - 122678785 ------------------GA--ATGCTATCTGGGGGCAAGCACCTGGGT-GG i canFam3.chr1 C 0 I 2773 e mm10.chr7 3621429 2960 + 145441459 I a score=602823.000000 s hg38.chr19_GL949753v2_alt 83314 241 + 796479 Gtttgttgttgttgttttgcgacggaatctcactctgtcacccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccactacacccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat s panTro4.chr19 59016767 241 + 63644993 Gtttgttgttgttgttttgagacggaatctcactctgtcgcccaggctggagtgcagtggcgtgaatttggctcaccacaacctccacctccctggtaccagcgattttcctgcctcggcctcccgagtagctgggactacaggcgcccgccactacgcccggctaatttttttgta---tttttggtagagacggagtttcaccgtgttagccaggatggtcccgatctcctgacctc--gtgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893269 241 + 60714840 Gtttgttgttgttgttttgagacagaatctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccactacgcccggctaatttttttgta---tttttagtagagacggagtttcaccgtgttagccagaatggtctcgatctcctgacctc--gtgat i ponAbe2.chr19 C 0 I 287 s nomLeu3.chr10 102658495 238 - 106955855 GT---TTGTTGTGGttttgagacggaatctcactctgttgcccaggctggagtgcagtggcgtgatctcggctcaccacaacctccacctccctggttccagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccactacgcttggctaatttttttgta---tttttagtagagacagagtttcaccatgttagccaggatggtctggatctcctgacctc--atgat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59941920 236 + 64156825 -t------ttgtttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccacctcacccggctag-ttttttgtattttttttagtagagacggggtttcactgtgttagccaggatgctctcgatctcctgacctc--gtgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54946225 235 + 59248254 Gt------ttgttgttttgaggtggaatctcattctgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcgtcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079645 235 + 51301725 Gt------ttgttgttttgaggtggaatctcattttgttgcccaggctggagtgcagtggtgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggaatacaagcacctgcaaccacccccagctaa--tttttgta---tttttagtagagacagggtttccccgtgttggccaggctggtcttgaactcctgacctcaggtgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784479 238 + 50890351 Gt---ttgttgttgttttgaggtggagtctcattctgttgcccagactggagggcagtggcgtgatctcggctcaccacaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaagcacctgcaaccatgcccagctaa--tttttgta---tttttagtagagacagggtttcaccgtgttggccaggctggtcttgaactcctgacctcaggtgat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353321 231 + 49145316 Gttttttgtcgt--ttttgagacgaagtctcgctttgtctcccaggctggagtgcaatggcgcaatcttggctcacccccacctctgcctcctgggttgaagcgattctcctgcctcagcctcccaagtagctgggatgacaggtgcctg--------cctagctaa--tgtttgtg---tttttagtagagacgggttttccccatgttggccaggctgctattgaactcctgacctcaggtgag i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=173191.000000 s hg38.chr19_GL949753v2_alt 83555 61 + 796479 ccgcctgcctcggcctcccaaagtgctgggattacaggcatgatgagccactgcgcccggc s panTro4.chr19 59017008 61 + 63644993 ccgcctgcctcggcctcccaaagtgctgggattacaggcgtgatgagccactgcgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893797 58 + 60714840 ccgcctgcctcggcctcccaaagtgctaggattacaggcg---gaagccaccgtgcccagc i ponAbe2.chr19 I 287 C 0 s nomLeu3.chr10 102658733 58 - 106955855 cctcctgcctcggcctcccaaagtgctgggattacaagcg---tgagccactgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59942156 58 + 64156825 ccgcctgtctcggcctcccaaagtgctgggattacaggct---tgagccaccgcgcccggc i rheMac3.chr19 C 0 I 2123 s macFas5.chr19 54946460 58 + 59248254 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47079880 58 + 51301725 ccgcccgcctcggcctcccaacgtgctgggattacaggtg---tgagccaccgcgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46784717 58 + 50890351 ccgcctgcctcggcctcccaaagtgctgggattacaggca---tgagccaccgcgcccggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45353552 58 + 49145316 ccacctgcctcggcctcccaaagtgctcagattacaggcg---tgagccaccgtgcccggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=2800.000000 s hg38.chr19_GL949753v2_alt 83616 1 + 796479 c s panTro4.chr19 59017069 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55893855 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102658791 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54946518 1 + 59248254 c i macFas5.chr19 C 0 I 1781 s papAnu2.chr19 47079938 1 + 51301725 c i papAnu2.chr19 C 0 I 2426 s chlSab2.chr6 46784775 1 + 50890351 c i chlSab2.chr6 C 0 I 1495 s calJac3.chr22 45353610 1 + 49145316 c i calJac3.chr22 C 0 I 1458 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e rheMac3.chr19 59942214 2123 + 64156825 I a score=964957.000000 s hg38.chr19_GL949753v2_alt 83617 597 + 796479 TATTtcaacttaagtgaaaatctcacctgtggccagcggctaccgtgctggacagcacagGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggttgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgtgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAACTTGCTCCAGTTTTGCTGGTACAGGGACACTGCGAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc--------aaaaaaaaaagaaaatacttgcagtcaggtctgtgctcgtgtgccttccatcctgctgttccctcccttcagGGGGAGGAGG s panTro4.chr19 59017070 601 + 63644993 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTACGGACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcagccaagaaggaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcgccgagcctgagccaaggactgagatgagaactgtggttgactcagcaacgtggagccattCCTACAAAGCTTGCTCCAGTTTTGCTGGTACAGGGACACTGTGAGTGGCAGGGGCAGCAGCCACCTGGGCAGCTTCTGTGGAGACGCACAgtgggaagctctgagctcagctcaccacctgcaagctctgac--aaccctgccgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacagc----aaaaaaaaaaaaaaaaaaaaaattgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i panTro4.chr19 C 0 I 115 s ponAbe2.chr19 55893856 594 + 60714840 TATTTCAACTTAAGTGAAAATCTCACCTGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGC-GACAGAGgaaccctgggagccgcaggtttcagcttt-----ggggagggaggatgaactagcaaaggcggccaagaaggaacagccggaaaggcaggagaccccaggatgctgggtgcccaggatggcaagaatgggctccagggaagagcacatagccctgggccactgcaccgagcctgagccaaggactgagatgagaactgtggttgatgcaacaacgtggagccattCCTACAAAGCTTGCTCCAATGTTGATGGGACAGGGACACTGTGAGTGGCAGGGGCAGCACCCACCTGGGCAGGTTCTGTGGAGACACACAgtgggaagctctgagctcagctcaccacctgcaagctccggcttaaccccgctgcagcctcatgatattggtgctgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcataccgc------------aaaaaaaaaaaaacttgcagccaggtctgTGCTTGTGTGCCTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102658792 591 - 106955855 TATTTCAACTTAAGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACACAGgaaccctgggagccgcaggtttcagctttgcggaggggagggaggatgaactagcaaaggcggccaagaaagaacagccggaaaggcaggagaccccaggctgctgggtgcccaggatggcaagaatgggctccagggaagagcacgtagccctgggccactgcgccg-----------aggaccgagatgagaactgtggttga--cagcaatgtggagccattCCTACAAAGCTTGCTCCAAGTTTGCTGGGACAGGGACACT--GAGTGGCAGGGGCAGCAGCCACCTGGGCAGGTTCTGTGGAGACGCACAGTGGGAAGCTCTGAGCTCAGCTCACCACCTGCAAGCTTCGGCTTAACCCCGCCGCAGCCTCATGATATTGGTGCTGCCCTTAGTTGATAGGAAACAGCTCAGAGAA-GGACACTGCTTGCTT--AGTCACACCGC---aaaaaaaaaaaaacacaaaaaaCTTGCAGCCAGGTCTGTGCTCATGTGCTTTCCATCCTGCTGTTCCCTCCCTTCAGGGGGAGGAGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59944337 568 + 64156825 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGGCACCGGGGCAGGTTTTGTGGAGATGCACAGTGGGAAGCTCTGGCCT---------------------------AAccccgccacaacctcatgatactggcactgcccttagttgataggaaacagctcagagaagggacactgcttgcttagagtcacacCACaaaaaaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i rheMac3.chr19 I 2123 I 1 s macFas5.chr19 54948300 564 + 59248254 tatttcaacttaagtgaaaatctcacccgtggccagcggctaccgtgctggacagcacagGTGCGGACAGAGgaaccctgggagccgcaggtttcagctttg----gggaaaggaggatgaactagcaaaggcggccaggaaggaacagcctgaaaggcaggagaccccaggctgccgggtgaccaggatggcaagaatgggctccagggaagagcacataaccctgggtcactgcgccgagcctgagccgaggaccgagatgagaaccgtggttgactcagcaaggtggagCCCTTCCTACCAAGCTTGCTCCCATTTTgctgggacagggacactgtgagtggcaggggcagcaggcaccggggcaggTTTTGTGGAGATGCACAGTGGGAAGCTCCGGCCT---------------------------AACCCCGCCACAACCTCATGATACTGGCACTGCCCTTAGTTGATAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCACACCAC----aaaaaaaaaaaaaaaaaaaaaCTTGCA-------------TTTTGTGCCTTCCATCGTGCTGTTCCCTCCCTTCAGGAGAAGCAGC i macFas5.chr19 I 1781 I 1 s papAnu2.chr19 47082365 562 + 51301725 TATTTCAACTTAGGTGAAAATCTCACCCGTGGCCGGCGGCTACCGTGCTGGACAGCACAGGTGCGGACAGAGGAACCCTGGGAGCCGCAGGTTTCAGCTTTG----GGGAAAGGAGGATGAACTAGCAAAGGCGGCCAAGAAGGAACAGCCTGAAAGGCAGGAGACCCCAGGCTGCTGGGTGACCAGGATGGCAAGAATGGGCTCCAGGGAAGAGCACGTAGCCCTGGGTCACTGCGCCGAGCCTGAGCCGAGGACCGAGATGAGAACCGTGGTTGACTCAGCAACGTGGAGCCCTTCCTACCAAGCTTGCTCCCATTTTGCTGGGACAGGGACACTGTGAGTGGCAGGGGCAGCAGTCACCGGGGCAGGTTTTGTGGAGATGCACCGTGGGAAGCTCCGGCTT---------------------------AACCCCGCTGCACCCTCATGATACTGGCACTGCCCTTAGTTGACAGGAAACAGCTCAGAGAAGGGACACTGCTTGCTTAGAGTCacaccgc---aaaaaaaaaaaaaaaaaaaaaaattgca-------------ttttgtgCCTTCCATCGTGCTGTTCCCTCCCTTCAGG---AGCAGC i papAnu2.chr19 I 2426 I 1 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I e chlSab2.chr6 46784776 1495 + 50890351 I a score=118512.000000 s hg38.chr19_GL949753v2_alt 84214 55 + 796479 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCTCTCCACCCGGCCCTC s panTro4.chr19 59017786 55 + 63644993 ccctccacccgcccctccctcagtcc---cagtgctcagccccttccacccgcccctc i panTro4.chr19 I 115 C 0 s ponAbe2.chr19 55894451 55 + 60714840 CCCTCCACCCGGCCCTCCCTCAGTCC---CAGTGCTCAGCCCCCTCCACCCGGCCCTC i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102659384 55 - 106955855 CCCTCCACCCCGCCCTCCCTCAGTCC---CAGCGCGCAGCCCCCTCCACCCCCCCCTC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59944906 55 + 64156825 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54948865 55 + 59248254 CCTTCCAGCCGGCCCTCCCTCAGTCC---CGGCGCGCAGCCCCCTGCACCCGGCCCTC i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47082928 58 + 51301725 CCCTCCAGCTGGCCCTCCCTCAGTCTCGGCGGCGCGCAGCCCCCTCCAGCCGGCCCTC i papAnu2.chr19 I 1 I 7 s chlSab2.chr6 46786271 55 + 50890351 CCCTCCAGCCGGCCCTCCCTCAGTCC---CGGGGCGCAGCCCCCTCCAGCCGGCCCTC i chlSab2.chr6 I 1495 I 7 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=54144.000000 s hg38.chr19_GL949753v2_alt 84269 31 + 796479 CCTCAGT-CCCAGCG--------------------------------------CACAGCCCCTTCCACCC s panTro4.chr19 59017841 31 + 63644993 cctcagt-cccagtg--------------------------------------ctcagccccttccaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894506 69 + 60714840 CCTCAGT-CCCAGTGCTCAGCCCTCTCCACCCGGCCGTCCCTCAGTCTGAGCACACAGCCCCCTCCACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659439 32 - 106955855 CCTCAGTCCCCAGCG--------------------------------------CGCAGCCCCCTCCACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59944961 31 + 64156825 CCTCAGT-CCCAGCA--------------------------------------CGCAGCCCCCTCCAGCC i rheMac3.chr19 C 0 I 25 s macFas5.chr19 54948920 31 + 59248254 CCTCAGT-CCCAGCG--------------------------------------CGCAGCCCCCTCCAGCC i macFas5.chr19 C 0 I 25 s papAnu2.chr19 47082993 31 + 51301725 CCTCAGT-GCTGGCG--------------------------------------CGCAGCCCCCTGCACCC i papAnu2.chr19 I 7 T 38 s chlSab2.chr6 46786333 31 + 50890351 CCTCAGT-CCCGGGG--------------------------------------CGCAGCCCCCTCCAGCC i chlSab2.chr6 I 7 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=27029.000000 s hg38.chr19_GL949753v2_alt 84300 11 + 796479 GGCCCTCCCTC s panTro4.chr19 59017872 11 + 63644993 ggccctccctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894575 11 + 60714840 AGCCCTCCTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659471 11 - 106955855 CGCCCTCCCTC i nomLeu3.chr10 C 0 T 39 s rheMac3.chr19 59945017 11 + 64156825 GGCCCTCCCTC i rheMac3.chr19 I 25 C 0 s macFas5.chr19 54948976 11 + 59248254 GGCCCTCCCTC i macFas5.chr19 I 25 C 0 s papAnu2.chr19 47082986 11 + 51301725 GGCCCTCCCTC i papAnu2.chr19 T 38 C 0 s chlSab2.chr6 46786364 11 + 50890351 GGCCCTCCCTC i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=14606.000000 s hg38.chr19_GL949753v2_alt 84311 12 + 796479 AGT-CCCAGTGCT s panTro4.chr19 59017883 12 + 63644993 agt-cccagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894586 12 + 60714840 AGT-CCGAGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659443 13 - 106955855 AGTCCCCAGCGCG i nomLeu3.chr10 T 39 C 0 s rheMac3.chr19 59945028 12 + 64156825 AGT-CCTGGCGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948987 12 + 59248254 AGT-CCTGGCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47082997 12 + 51301725 AGT-GCTGGCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786375 12 + 50890351 AGT-CCCGGGGCG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I e calJac3.chr22 45353611 1458 + 49145316 I a score=26184.000000 s hg38.chr19_GL949753v2_alt 84323 12 + 796479 CAGCCCTCTCCA s panTro4.chr19 59017895 12 + 63644993 cagccccttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894598 12 + 60714840 CAGTCCCCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659456 12 - 106955855 CAGCCCCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945040 12 + 64156825 CAGTCCCCTGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54948999 12 + 59248254 CAGTCCCCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083009 12 + 51301725 CAGCCCCCTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786387 12 + 50890351 CAGCCCCCTGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355069 12 + 49145316 CAACCCACTCTA i calJac3.chr22 I 1458 C 0 e mm10.chr7 3621429 2960 + 145441459 I e canFam3.chr1 19581557 2773 - 122678785 I a score=39653.000000 s hg38.chr19_GL949753v2_alt 84335 13 + 796479 CCCGGCCCTCCCT- s panTro4.chr19 59017907 13 + 63644993 cccggccctccct- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894610 13 + 60714840 CCCGGCCCTCCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659468 13 - 106955855 CCCCGCCCTCCCT- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59945052 13 + 64156825 CCCGGCCCTCCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949011 13 + 59248254 CCCGGCCCTCCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083021 13 + 51301725 CCCGGCCCTCCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786399 13 + 50890351 ACCGGCCGTCCCT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355081 13 + 49145316 CCTGGCCCTCCCT- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624389 14 + 145441459 CCTACCCCTCACCC i mm10.chr7 I 2960 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 84348 1 + 796479 C s panTro4.chr19 59017920 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894623 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59945065 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949024 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083034 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786412 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355094 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3624403 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I e nomLeu3.chr10 102659481 1 - 106955855 I a score=262629.000000 s hg38.chr19_GL949753v2_alt 84349 99 + 796479 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT s panTro4.chr19 59017921 99 + 63644993 AGTCCCAGTGCTCAGCCCTC--TCCTCCAACACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCTGGCCCTCATCTCCGG---CTTCTCCTTGTGGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894624 95 + 60714840 AGTCCCACTGCTCAGCCCTC--TGCTGCAAGACCAAATCCCACTCTT----CTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659482 99 - 106955855 AGTCCCAGCGCGCAGCCCTC--TCCTCCAAGACCGAATCCCACTCTTCCTCCTTGTTTGCCTCAGCCCCCGGCCCTCATCTCCAG---CTTCTCCTTGTGGCTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59945066 99 + 64156825 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949025 99 + 59248254 AGTCTTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGGCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083035 99 + 51301725 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CACACTCTTCCCCC--GTTTGCCTCAGGCCCTGGCCCTcatctcctgcctctcctccttGTGGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786413 99 + 50890351 AGTCCTAGTGCTCAGCTCTC--TCCTCCAAGACCGAA-CGCACTCTTCCTCC--GTTTGCCTCAGCCCCCGGCCCTCATCTCCTGCCTCTCCTCCTTGTGGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355095 100 + 49145316 AGTCCCAGTGCTCAGCGCTCCTCCCTCCAAGACCGAATTCCACTCTTCCT----GCTTGCCTCAGCCCCAGGCCCTCATCTCCAGGCTCTCTTCCTTGTGACTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3624404 93 + 145441459 AGGCCCAGGGC-CAGCTCTT--CATTCCATGACCCAGTGCTACTTCTCC-----ACTTCTCTCA-CTCTGGGCCCTTCTCCTCAG--TTTTGTCCCCGTGCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19581557 2773 - 122678785 I a score=658438.000000 s hg38.chr19_GL949753v2_alt 84448 184 + 796479 GTGAGGGTTGGGTGGATGTGGAAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACAGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- s panTro4.chr19 59018020 184 + 63644993 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC---AGAGGGGCTGGG---AGCATTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTATGGGGTGGGAAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894719 175 + 60714840 GT---------GTGGATGTGGGAGT-GGG----AGAGAC---AGAGCGGCTGGG---AGCACTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659581 179 - 106955855 GTGAGGGTTGGGTGGATGTGGGAGT-GGG----AGAGAC-------GGGCTGGT---TGCGTTTGGGAGC--TGAGGCTCACGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGTTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945165 185 + 64156825 GTGAGGGTTGGGTGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949124 185 + 59248254 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTCTGGGAGC--CGGGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083134 185 + 51301725 GTGAGGGTTGGGCGGacgtgggagtgggg----agagac--cAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGAGAAGGGGTTACCTCcgctcctgctgcagcctccgaGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786512 185 + 50890351 GTGAGGGTTGGGCGGACGTGGGAGTGGGG----AGAGAC--CAGAGGGACTGGG---GGTGTTTGGGAGC--CGAGGCTTAGGGGCCCAG---AGGGGACGGTGAAGGGGTTACCTCCGCTCCTGCTGCAGCCTCCGAGTTATCCTCTGCACCTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGG-AA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355195 186 + 49145316 GTGAGGGTTGGGTGGTCATGGGAGTGGGG----AGACAC--GATAGCGGGTGAG---AGTGTCTGGGAGC--TGAAGCTCACAGGCCCAG---TGGAGGCACAGAAGGGGTTACCTCCTCTCCTGCTGTAGCCTCCGAGTGATCCTCTGCACTTGATGGAGCCTGTTCAGGACCCGCTCGTTCACCTGTGGGGTGGGAAA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3624497 187 + 145441459 ATGAAGGCCAGGAAGACGGGAGATAATGGCACAAAGGGT--GAAAGGTGGTGGA---AATATGTGGGAGCAAAGGGGCT---GGGCCCAC---AGAGTATACAGAATGG--TACCTGCGCTCCTGCTGGAGTCTCCGAGTTATCCTTTGCACCTGATGGAGCCTGTTCAAGACTCGCTCATTCACCTGCAAGGAGGCAGA--- i mm10.chr7 C 0 I 2191 s canFam3.chr1 19584330 196 - 122678785 GTGAGGCCTGCACAGACACGAAGGAGGCA----AGAATCGCCAGAGGTGGTAGAAACAGCAGCTGGGAGC--AGAGGCCCG-GGGCCCAGGGAGGGGGGCGTGCAGGGGCTTACCTCCGCTCCTGCTGCAGTCTCCGTGTTATCCTTTGCACCTGATGAAGTCTGTTCAGGACCCGCTCATTCACCTGCAGGGAGCCAGAAGG i canFam3.chr1 I 2773 C 0 a score=908721.000000 s hg38.chr19_GL949753v2_alt 84632 307 + 796479 CGCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcgtgctgttcctctacctggaccctctccccagtcatccgcacaacttactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc s panTro4.chr19 59018204 307 + 63644993 CTCCCATCAGCTGGATCCCACGACTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCT----------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCAGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagtcatccgcacaactcactccccactc---caagtcttaggtcaactgttacctgctcagagag----cctgaacctcccattaagtcgaaacacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55894894 309 + 60714840 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAACGGATGTTTAATGGGGCACGCACTAAACTCTGG--------GGAGACTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCTACCGGCTCCCctctcaccatgccacagtcctgagtgccctccagt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccatccgcacaactcactctccactc---caagtcttaggtcaactgttacctgctcagagag----cccgaacgtcccattaagtcgaaacacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102659760 304 - 106955855 CTCCCATTAGCTGGATCCCACGGCTCCCGTTCATTTGTTTAAGGGATGTTTAATGGGGCACGCACTAACCTCTGG--------GGAGATTGGCCAAAGACCATCCCGTGGCCTGAGGTC-CTTCCACCTTCCCATCCCTCCGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCCCTCCAGT---GGgggcctt-ccgcatgctgttcctctccctggac---ctccccagccatcctcacaactcactccccactc---caagtc--aggtcaactgttacctgctcagagag----cccGAACCTCCCATTAAGTCGAAACACACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945350 309 + 64156825 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGtc-cttccaccttcccctccctccggctcccctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54949309 309 + 59248254 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGTATGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCctctcaccatgccacagtcctgagtgccctcccgt---gggggcctc-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083319 309 + 51301725 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTtccaccttcccctccctccGGCTCCCCTCTCACCATGCCACAGTCCTGAGTGCTCTCCTGT---GGGGGCCTT-CGGCATGCTGTTCCTCTACCTGGACCCTCTCCCCAGCCGTCCATACGGCTCACTCCCCACTC---CAAGTCTTAAGTCAACTGTTACCTGCTCAGAGGC----CCCAAACCTCCCATTAAGTCGAAACacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46786697 309 + 50890351 CTCCCATCAGCTGGATCCCACGGCTCCCGTTCATTTGTTCAACGGATGTTTAATGGGGCACGTACTAGGCTCCGG--------GGAGACTGGTCAAAGACCATCGTGTGGGCTGAGGTC-CTTCCACCTTCCCCTCCCTCCGGCTCCCCTGTCACcatgccacagtcctgagtgccctcccgt---gggggcctt-ccgcatgctgttcctctacctggaccctctccccagccgtccatacggctcactccccactc---caagtcttaagtcaactgttacctgctcagagac----cccgaacctcccattaagtcgaaacacacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45355381 311 + 49145316 CTCACATGAGCTGGCTCCCACTCCTCCCATTCATTTGTTCAACGGATGTGTAATGGAGCACTTGCTAAGCTTGGG--------GGAGACTGGACAAAGACCCTCCTGTGGCCTGAGGCCACGTCCACCTTCCCatccctcccactcccctctcaccacgctg-ggtcctgagtgccctcctgt----ggggcctt-ccacatgccattcttctacatggaccctcgacccagccattcacgcagctcactccccactccctcaagtcttagatcaactgttacctgctcagggag----cccaaacctcccaTTAAGTCGAAACATACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19584526 269 - 122678785 CACAGGTCACCTGGACTCTGC---------TCACTTATTCCATGTGGGATGAATGTAGCGCCAGCGGGGGCCCAGAGGCCTCAGGGAGCCGGCCACA---CTCCCCATGGCCTCTGGGG-CTGCTGCGCCCACTCCTTtcctgcatctgcgcctcccta-------gctggctgc-ctcctgtcctgggggccttcccacatgc--------------------------------cagaggagctccctccct-------caagcctgacctcagaggttacctcctcagggagtccacccagacctcccaccacacagcaatacccc i canFam3.chr1 C 0 I 354 e mm10.chr7 3624684 2191 + 145441459 I a score=325164.000000 s hg38.chr19_GL949753v2_alt 84939 134 + 796479 aggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtaggtcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a s panTro4.chr19 59018511 134 + 63644993 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtctggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895203 134 + 60714840 aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaa--a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660064 131 - 106955855 Aggccaggcgcggtaat---cgcctgtaatcccagcactttgggaggccgaggcgagtagatcccctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaagtacaaga--a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59945659 119 + 64156825 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaaa-- i rheMac3.chr19 C 0 I 382 s macFas5.chr19 54949618 118 + 59248254 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattactcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctttactaaagatacaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083628 118 + 51301725 aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctttactaaagatacaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46787006 119 + 50890351 Aggccaggcgcggtggctaatgcc---------------ttgggaggccgaggcggacagattattcaaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctttactaaagatacaaaa-a- i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45355692 134 + 49145316 Aggccaggcacagtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcgaaagcagcctggccaacatggcgaaaccccgtctccactaaaaatacaaaa--a i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I a score=27993.000000 s hg38.chr19_GL949753v2_alt 85073 20 + 796479 attagctgggcgtggtggca s panTro4.chr19 59018645 20 + 63644993 attagctgggcatggtggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895337 20 + 60714840 gttagccgggcatggtggca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660195 20 - 106955855 attagctgggcgtggtggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949736 20 + 59248254 attacccggatgttgtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47083746 20 + 51301725 attacccggatgttgtggcg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355826 20 + 49145316 attagccaggcgtggtggca i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e rheMac3.chr19 59945778 382 + 64156825 I a score=8221.000000 s hg38.chr19_GL949753v2_alt 85093 8 + 796479 ggtgcctg s panTro4.chr19 59018665 8 + 63644993 ggtgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895357 8 + 60714840 ggcgcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660215 8 - 106955855 ggcgcctg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083766 8 + 51301725 catgcctg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45355846 8 + 49145316 tgtgcctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=56098.000000 s hg38.chr19_GL949753v2_alt 85101 100 + 796479 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccagcctgggcaacagagcgaggttctgt-----ttcaaaa s panTro4.chr19 59018673 100 + 63644993 caggatagtcgcacgaacctgggaggtggaggggtgaagtgagttgagatcaccccactgcactccaggctgggcaacagagcgagattctgt-----ttcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895365 100 + 60714840 caggatagttgcacgaacccgggaggtggaggggtgaagtgaggtgagatcaccccactgcactccagcctgggcaacagagcgagattctgt-----ttcaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660223 100 - 106955855 caggatagtcgcatgaacccgggaggtggaggggtgaagtgagttgagatcaccccactgcattccagcctgggtgacagagtgagactctgt-----ctcaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47083774 82 + 51301725 -----taatttcagctactcgagaggctgaggtcaggagt------------------tccagaccagcccagtcaacatgatgaaaccctgtctttactcaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=3343.000000 s hg38.chr19_GL949753v2_alt 85201 7 + 796479 aaaaaaa s panTro4.chr19 59018773 7 + 63644993 aaaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895465 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47083856 7 + 51301725 aaaaaaa i papAnu2.chr19 C 0 I 393 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=88736.000000 s hg38.chr19_GL949753v2_alt 85208 342 + 796479 ttgcaacacacccgaccccccttcccatgccagaaccccacccggccattcactcctggctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcaacttgtttctacatcccgtgccttaaccagagcctggcacgtagtacatcctccatgaacatttgcagaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG s panTro4.chr19 59018780 342 + 63644993 ttgcaacacacccgcccccccttcccatgccagaaccccaccaggccattcactcttagctttatttcctcctagtgctcatctgaggaggcaggacgcagcctctccgcctctttgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaacgacagcgacttgttcctacatcccgtgccttcaccagagcctggcacgtagtacctcctccatgaacgtttgcggaattgatgaCTTTGAAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895472 334 + 60714840 ttgcaacacacccacccccccttcccatgccagaaccccacctggccattcactcttagctttatttcctcctagtgttcatctgatgaggcaggacgcagcctctc--------tgcttattctgctgactgaccgcctctccagccagagcatgagctgaaaaatgacagcgacttgttcctacatcccgtgccttaaccagaccctggcatgtagtacatcctccatgaacatttatggaatcaatgaCTTTGCAAAGTGAGAAGTGCTTGGTGAATACCAAAGAGTCAGACATGCTGGAGGTTAGGGCAGGAGGTGCGACTTTAGTTACGACCTGCAG i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3624684 2191 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=74622.000000 s hg38.chr19_GL949753v2_alt 85550 209 + 796479 AGAAGGCCCGTGGGCCCAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCAAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCCGggc s panTro4.chr19 59019122 209 + 63644993 AGAAGGCCCGTGGGCCGAGACTTGAATAA---GGAGGAGACAAAGGGG-----TGACAGGAGGAAAGTATGCCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAGGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGACCCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55895806 206 + 60714840 AGAAGGCCCGTGGGCCCAGACTTGAATA------AGGAAACAAAGGGG-----TGACAGGAGGAAAGTACACCAGGCTGAGGGGACAGCCCTGCACGCAGCTTCTGAAGACTCCAGCCTAGACATGG--AGGGAGAGATGTGACTCAGCCAAACAGGGAACCGAAGACAGTGGCTGAAGCAGGTGCTGCTCCTGGGTCAGAAAGACCTGAG--TTCAGggc i ponAbe2.chr19 C 0 C 0 s mm10.chr7 3626875 209 + 145441459 AGAAGATCTTTAAGCCAACACCTGAATGACAGGCAGGAGACAAATAAGAAGCAAGTCAGGAGGAGAACATTCCAGAATCAGGGAACAGCCCT---TGAACTTTTTGAAGGCCCCAGCCTAGATATGGAAAGGAAAGGACAAGACTCAGTCAAACAGTG--CCTAGGACACAGGCTAAAG-------TTctttctgatcagaaagacctgcactttccaggc i mm10.chr7 I 2191 I 1545 e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=84692.000000 s hg38.chr19_GL949753v2_alt 85759 321 + 796479 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcgggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagagtttgaggtcgggagttccagaccagcccggccaacatgatgagacctcatctctactaaaaaaaaaaaaaaaaaaa----gaaaaatacaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg s panTro4.chr19 59019331 322 + 63644993 ggggcacagtggctcacgcctgtaatcccagcactttgggaggccggggcaggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaagatacaaaaattggccggatgttgtggcacatgcctgtaatctcagctactcaagaggctgaggtcaggagttccagaccagcccagccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaa---agaaaaatgcaaaaattagctgggtatggtggcgcatgcctgtaatcccagtttctcaggaggctgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896012 325 + 60714840 ggggcacagtggctcacgtctgtaatcccagcactttgggaggccggggcgggcagatcccttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaattggccggatgttgtagcgcatgcctgtaatcccagctactcaggaggcagaggtcaggcgttccagaccagcctggccaacatgatgaaacctcatctctactaaaaaaaaaaaaaaaaaaaaaaagaaaaatacaaaaattagctgggtgtggtggcgcatgcctgtaatgccagtttctcgggaggctgagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e calJac3.chr22 45355854 0 + 49145316 C e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=41293.000000 s hg38.chr19_GL949753v2_alt 86080 108 + 796479 caggagaatcgcttgaacccaggagctggaggttgcagtgagccgagatcacaccactgccctccagcctgggtgacagagtaagactctgtctcaaaagaaaaaaaa s panTro4.chr19 59019653 104 + 63644993 caggagaatcgcttgaacccgggagctggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtaagact--gtctcaaaa--aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896337 102 + 60714840 caggagaatcgcttgaacccgggaggtggaggttgcagggagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctc------aaaaaaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45355854 98 + 49145316 caggagaatcacttgaa-ctgggaggcagaggctgcagtgagctgagatcatgtcactgcaatccagcctggatgacagagtaacaccctgttt-------aaaaa-- i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e nomLeu3.chr10 102660323 0 - 106955855 C e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=19887.000000 s hg38.chr19_GL949753v2_alt 86188 26 + 796479 aaaaaaaaGTgccaggcacggtggct s panTro4.chr19 59019757 26 + 63644993 aaaaaaaaGTgccaggcacggtggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896439 26 + 60714840 ataaaaaaGTgccaggcacggtggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660323 26 - 106955855 aaaaaaaaGTgctaggcacggtggct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45355952 26 + 49145316 aaaaaaaaCAgctgggtacggtgact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54949756 0 + 59248254 C e rheMac3.chr19 59945778 382 + 64156825 I a score=99426.000000 s hg38.chr19_GL949753v2_alt 86214 99 + 796479 cacgcttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacgtggtgaaaccctgtctctact s panTro4.chr19 59019783 99 + 63644993 cacacttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccagc----ctaacatggtgaaaccctgtctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896465 103 + 60714840 cacatttgtaatcccagcactttcagaggccaaggcgagcagatcacctgaggtcaggagtttgagaccagcctgactaacatggtgaaaccctgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660349 103 - 106955855 cacccttgtaatcccagcactttcagaggccaaggcgagcggatcacctgaggtcaggagtttgagaccaggctgactaacatggtgaaaccctctcttcact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949756 85 + 59248254 catgcctgtaatctcagctactcgagagg------------------ctgaggtcaggagttccagaccagcccagtcaacatgatgaaaccccatctctact i macFas5.chr19 C 0 I 17 s calJac3.chr22 45355978 103 + 49145316 cacgcctgtaatcccagcactttgggatgcctaggtgggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccttgtatctact i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e chlSab2.chr6 46787125 119 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=402033.000000 s hg38.chr19_GL949753v2_alt 86313 240 + 796479 aaaaatacaaaattagccaggtgtagtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaaat-ccatctaaaaaaaaa------------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg s panTro4.chr19 59019882 243 + 63644993 aaaaatacaaaattagccaggtgtagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagactcgcttgaacccaggaggcggaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaa-a--aa------------gaGTTCAAGTTTTGGCTCTggcttggcacagtggctcatgcctataatcccagcactttga------------------------gaggccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896568 268 + 60714840 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa------------gaGTTCAAGTTTTggctctagcttggcacagtggctcatgcctataatcctagcactttgagaggccaaggcaggaggatcactcgaggccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660452 275 - 106955855 aaaaatacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagcaggcagaggttgcagt-gagctgagattgcagcattgcactccagcctggacaacaagagcgaaact-ccatctaaaaaaaaaaa--aa-----aagaCCTGAGTTCAAGTTTCCGCTCTggcttggcacagtggctcatgcctataatcccagcactttgagaggacaaggcaggaggatcactcaaggccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54949858 259 + 59248254 aaaactacaaaattagccaggtgtggtggcgcatgcctgtaatcccagctactcgggaggctgaggcagaagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaaagaaagaaaaagaCCGGAgttcaagtctcagctctggcctggcacagtggctcatgcctataatcccagcactttga------------------------gaggccaag i macFas5.chr19 I 17 I 16 s chlSab2.chr6 46787244 254 + 50890351 aaaactacaaaattagctaggtgtggt---gtatgcctgcaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccagaaggtggaggttgcggt-gagccgagatcacaccattgcactccagcctgggcaacaagagcgaaactcccatctgaaaaaaaaaa--aaagaaaaagaCCGGAGTTCaagtctcagctctggcctggcacagtggctcatgcctagaatcccagcactttga------------------------gaggccaag i chlSab2.chr6 I 119 I 16 s calJac3.chr22 45356081 280 + 49145316 aaaaatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcgggatgctgaggcaggagaatcgcttgaacccaggaggtggaggttgcggtggagctgagatcgcatcattgctctccagcctaggcagcaagaatgaaacc-ccatctcaaaaagaaaa--aa-gaaaaagacctgagttcaaatcttggctctggcttggcatggtggctcatgcctataatcccagcactttgagaggccaaggcaggaggatcacttgaggccagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59945778 382 + 64156825 I a score=382868.000000 s hg38.chr19_GL949753v2_alt 86553 180 + 796479 agttcgacaccagcctgggcaacagagtgagacccc-aacact-caaaaactaaccaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga s panTro4.chr19 59020125 181 + 63644993 agttcgacaccagcctgggcaacagagtgagacccccaacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctccttcggaggctg---------------agattgctagagtccaggatgttggggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55896836 180 + 60714840 agttcgacaccagcctgggcaacagagtgagacccc-gacact-caaaaactaacaaaa----aaaattagctgggcttggtggctgtagtcccagctcctttggaggctg---------------agattgctagagcccaggatgttggggctgcagtgaaccacagtcatgccactgcactccagcctgggcaacaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660727 175 - 106955855 agttcaacaccagcctgggcaacacagtgagacccc-aacact-caaaaactaac--------aaaattagctgggcttggtggccgtcgtcccagctccgtcggaggctg---------------agattg-tagagcccaggatgttggagctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946160 176 + 64156825 agtttgacaccagcctgggcaacagagtgagaccgc-aacactacaaaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i rheMac3.chr19 I 382 C 0 s macFas5.chr19 54950133 175 + 59248254 agtttgacaccagcctgggcaacagagtgagacccc-aacactac-aaaaaaaa---------aaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagcccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaga i macFas5.chr19 I 16 C 0 s chlSab2.chr6 46787514 185 + 50890351 agttcgacaccagcctgggcaatagagtgagacccc-aacactacaaaaaaaaaacaaaaaacaaaatcatctggccttggtggctgtagtcccagttcctttggaggttg---------------agattgctagagtccaggatgttgaggctgcagtgagccacagtcatgccactgcactccagcctgggcaacaca i chlSab2.chr6 I 16 C 0 s calJac3.chr22 45356361 193 + 49145316 agtttgacaccagcctgggcaacagagtgagacccc-atgactacaaaaaagaa---aa----aaaagtagctgggcatggtggctgtagtcccagcttcttgggaggctggaggctaagacaggaagattgctagagcccaggaggtggaggctgcagtgagccacaatcataccactgcactccagcctgggcaacaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19584795 354 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=460249.000000 s hg38.chr19_GL949753v2_alt 86733 206 + 796479 gaaagaccctgtctcaaaaaaaaaaaa--aaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagtagta--------atCTATTCCT-GGGGG-TGGATTAATGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT s panTro4.chr19 59020306 203 + 63644993 gaaagaccctgtctcaaaaaaaaaaaa-----tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCT-GGGGG-TGGATTAACGGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGGTGTCTGTCTGTTAAACAGGGTTTGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897016 200 + 60714840 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaataggagta--------atCTATTCCTGGGGGG-TGGATTAACAGCAGAGGCTCCAG------------------------TTGAGTCCGTTTGGG-CTTGGTGTCTGTCTGTTAAACAGAGTTTGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102660902 204 - 106955855 gcaagaccctgtctcaaaaaaaaaaaaaaaaatctcagatctgccactgctgagctctgag--cttgggtgcattacttaacctctctgagccttgattttctatacttgta--aaatagaagta--------atCTATTCTT-GGGGG-TGGATTAACAGAAGAGGCTCCAG------------------------TTGAGTCCGTTTGGGCCTTGG----TGTCTGTTAAACAGGGTTTGGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946336 200 + 64156825 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atCTATTCCT-GGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950308 200 + 59248254 gcaagaccctgtctcaaaaaaaaa--------tctcagatctgccactgctgaactctgag--cttgggtgcattacttaacctctctgagcctttattttctacgctagta--aaataggaata--------atctattcct-gGGGG-TGGATTAAGAGCAGAGGCTCCAA------------------------TTGAGTCCATTTGGGCCTTGGTGTCCATCTGTTAAGCAGGGTTTGGAAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787699 199 + 50890351 gcaagaccctgtctcaaaaaaaca--------tctcagatctgccactgctgagctctgag--cgtgggtgcattacttaacctctctgagcctttattttctatgctagta--aaacagaaata--------atctattcct-gGGGA-TGGA-TAAGAGCAGAGGCTCCAA------------------------TTGAGTCCGTTTGGGCCTTGGTGTCCATCTGTTAAACAGGGTTTGGAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356554 207 + 49145316 gcgagaccccatctcacaaaaag---------tttcaggtctgccactgctgagctctgtg--cttcggtgtgttacttaacctctctgagccttaattttctatacttgt---aaatagacgtaataacaggatctattcct-gggggctgGATTAAGAGCAGAGGCTCCAG------------------------TTGAGTCCCTTTGGGCCTGGGTGTCCATATGTTAAACAGAGTTTGGAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19585149 219 - 122678785 gaaagacctgggttcaaa--------------tcccag-cctgccact-ctcagctgtgtgaccttgggcaagttacctaacctatcttagtcttgcatttcaccacctgtcttgaata-acgcc--------acctgttctaatggga-cagattaagagcagaaaatcaaatgccagatacatttgagcaaatgcttGAGTCCCTCTGGACCT-GGTATTTGTGTGCTAAACAGGGCTTGGGGT i canFam3.chr1 I 354 I 632 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=10696.000000 s hg38.chr19_GL949753v2_alt 86939 4 + 796479 ATGC s panTro4.chr19 59020509 4 + 63644993 ATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897216 4 + 60714840 ATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661106 4 - 106955855 ATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946536 4 + 64156825 ATGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950508 4 + 59248254 ATGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787898 4 + 50890351 ATGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356761 4 + 49145316 ATGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19585368 632 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=165698.000000 s hg38.chr19_GL949753v2_alt 86943 66 + 796479 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagatg s panTro4.chr19 59020513 66 + 63644993 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAATACTGTCATTAAGAATTGAggccagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897220 66 + 60714840 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATTAAGAATTGAggccagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661110 66 - 106955855 CCCTGGCCTCT-----AGCCTTCCTCCTTACAGAACTCCCCAACACTGTCATCAAGAATTGAggccagatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946540 66 + 64156825 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950512 66 + 59248254 CCCTGGCCTCT-----AGCCTCCCTCCTTACAGAACTTCCCAACACTGTCATCAAGAGTTGAggccaggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46787902 66 + 50890351 CCCTGGCCTCT-----AGCCTCCCTCCCTACGGAACTTCCCAACACTGGCATTAAGAGTTGAggccaggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45356765 58 + 49145316 CCC-------------AGCCTCCCTCCTTACAGAACTCCCTAGCGCCGTCATTAAGAGCTGAggccaggtg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586000 65 - 122678785 CCCAGGCCACTACACCAGCCTCCCTTCTTTCCCAGCTCCCCAACACCACCATTA------GGGGTCAGATG i canFam3.chr1 I 632 I 483 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=196402.000000 s hg38.chr19_GL949753v2_alt 87009 82 + 796479 tggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct s panTro4.chr19 59020579 82 + 63644993 tggtagttcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897286 82 + 60714840 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661176 82 - 106955855 cggtggctcatgcctgtaatcctagcattttgggaggtcaaggcgagtggatcacttgaggtcaggagttcaagaccagcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946606 82 + 64156825 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i rheMac3.chr19 C 0 I 281 s macFas5.chr19 54950578 82 + 59248254 tggtggctcatgcctgtaatcctagcattttgggaagccaaggtgagtggatcacttgaggtcaggagttcaagaccagcct i macFas5.chr19 C 0 I 278 s chlSab2.chr6 46787968 82 + 50890351 cggtggcttatgcctgtaatcctagcattttgggaggccaaggtgaggggatcacttgaggtcaggagttcaagaccagcct i chlSab2.chr6 C 0 I 286 s calJac3.chr22 45356823 82 + 49145316 caatggctcatgcctgtaatcctagtatttggggaagccaaggcgaggggttcccttgaggtaaggaactcaagaccagcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=365974.000000 s hg38.chr19_GL949753v2_alt 87091 466 + 796479 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgtgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagactgaggctgcaatgagctgagattgcgccactgcactccagctttggtgacaaagtgagaacctgtctcaagaaa---gagaaaaagaGTTGAAggccaggcgtggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatagaaaaattagctgggtgtggtggcgggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca s panTro4.chr19 59020661 452 + 63644993 gggcaacatggcaaaaccccgtctctacaaaaagtacaaatattagccaggtgtggtggtgtgcgcctgtagtcccagctattttgggggctgaggcaggaggactgcttgaacctgggagatggaggctgcaatgagctgagattgtgccattgcactccagc-------acaaagtgagaacctgtctca----------gaaaaagaGTTGAAggccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcactcgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897368 465 + 60714840 gggcaacatggcaaaacctcatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcgcctgtagtcccagtttttttgggggctgaggcaggaggactgcttgaacctgggagat-gaggctgcaatgagctgagactgtgccactgcactccagctttggtgacaaaatgagaccctgtctcaaaaaa---gagaaaaagaGTTGAAgaccaggcatggtggctcaagcctgtaatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcgcctgtaatcccagctactagggaggctgagtcaggagaatcacttgaaccccggaggtggaggttacagtgagctgagatggtgccattgcactcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661258 439 - 106955855 gggcaacatggcaaaaccccatctctacaaaaagtacaaaaattagccaggtgtggtggtgtgcacctgtagtcccagctatttcaggggctgaggtagaaggactgcttgaacctgagagatcgaggctgcagtgagctgagattgcgccactgcactccagctttggtgacaaagtaagaccctgtctcaaaaaa---gagaaaaagaGTTGAAggccaggtgtggtggctcaagcctgtaatcccagcaccttgggaggctgaagcggtcggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtttctactaaaaatacagaaattagctgggtgtggtggc---------------------------aggctgagtcaggagaatcgcttgaacccaggaggtggaggttacagtgagctgagatggtgccattgcactcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45356905 464 + 49145316 gggcaacatggcgaaaccccagctctacaaaaagtacaaacgttagccaggtgtg-----gtgtgcctgtagtccccgctgttttgggggctgaggcaggaggattgcttgaacctgggaggttgaggctgcagtgagctgagattgcaccactgcactccagctttggtgacaaagtgagacgctgcctcaacaaagaggaggaaaaaaGCTGAAggccaggcgtggtggctcacacctgtaatcccagcaccttgggaggctgaggtgggtggatcacctgagatcaggagtttgagaccagcctggccaacgtggtgaaacgccggctctactaaaaatacaaaaattcgttgggtgtggtggcacacacctgtagtcccagctactcgggagactgaggcaggagaatcacctgaacccaggaggtggaggttacagtgagcaaagatggcaccactgcactcca i calJac3.chr22 C 0 I 2105 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=326476.000000 s hg38.chr19_GL949753v2_alt 87557 633 + 796479 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaaaagttgaattatttcccccaaaagagggtgttgaggctttaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacagacacacacacaggg--agcagcaatgtgaagatgaaggcggagatcagggtgatgtttgtacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggatgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcagactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagccctgcctgctgtttaatcctcatTGATTGA s panTro4.chr19 59021113 632 + 63644993 gcctgggagacaagagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaga---gttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaggccagtgggtgggccctaatccagtatgactggagtccttataaaaagggtaaattgggacacacacacacacacagaggcagcagcaatgtgaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctgtcgacaccttgccttggacgtctagcctccagaactgtcagacaggaatttctgtgcttgagggaccctatttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgttcctcccccatttgaaacccttcagtggctccttcactctcaagg-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55897833 619 + 60714840 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------TttgaattatttcccccaaaagagggtgttgaggctctaacccccagtacctcaggatcgccttatatggaggcagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtaaagatgaaggcggagatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctcacaaccctatcgacaccttgccttggacgtctagccttcagaactgtcagacaagaatttctgtgcttgagggaccctgtttgtgataagttctgggagtccaagcaaactaatacaACTGTCTTCAGAGtttcaggcatccagacctgatgctgtccctcccctgtctgaaacccttcagtggctccttcactctcaaag-aaaaaaaaatatccagacttcttgtcctggtgttcctggcctgccaagatctgagcccTGCCTGCTGTTTAATCCTCattgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102661697 620 - 106955855 gcctgggagacaagagcgagactccatctcaaaaaaaaaga----------------GTGCaattatttcccccaaaagagcatgttgaggctctaacccccagtacctcaggatcaccttatatggagacagtgtcgttacaaaagtaatcaagttcaaatgaagccagtgggtgggccctaatccagtatgactggagtccttataaaaaggggaaattgggacacagacacacacacagagggagcagcaatgtgaagatgaaggcggtgatcagggtgatgtttctacgtgccaatgactgccagaaacctccagaagccaggggagaggcctggaagattctgataatcctgtcgacaccttgcctgggacgtctagcctccagaaccgtcagacaggagtttctgtgcctgagggaccctgtttgtgatacgttctgggagtccgagcaaacgaatacaACTGTCTTCAACGtttcaggcatccagacctgatgctgtccctcccccgtttgaaacccttcagtggctccttcactctcaaggaaaaaaaaaatatccagacttcttgtcctggtgttccttgcctgccaagatctgagcccTGCCTGCTGTTTCATCCTCACTGATTGA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e macFas5.chr19 54950660 278 + 59248254 I e rheMac3.chr19 59946688 281 + 64156825 I a score=2992.000000 s hg38.chr19_GL949753v2_alt 88190 8 + 796479 TTGATTGA s panTro4.chr19 59021745 8 + 63644993 ttgattga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898452 8 + 60714840 ttgattga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662317 6 - 106955855 TTGAtt-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54950938 8 + 59248254 ttgttttg i macFas5.chr19 I 278 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e chlSab2.chr6 46788050 286 + 50890351 I e papAnu2.chr19 47083863 393 + 51301725 I e rheMac3.chr19 59946688 281 + 64156825 I a score=12034.000000 s hg38.chr19_GL949753v2_alt 88198 11 + 796479 tt------------ttgagacgg s panTro4.chr19 59021753 19 + 63644993 tt----gattgattttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898460 23 + 60714840 ttgattgattgattttgagacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662323 9 - 106955855 --------------ttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946969 11 + 64156825 ------------ttttgagacgg i rheMac3.chr19 I 281 C 0 s macFas5.chr19 54950946 11 + 59248254 ------------ttttgagacgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788336 11 + 50890351 ------------ttttgagacgg i chlSab2.chr6 I 286 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e calJac3.chr22 45357369 2105 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=558783.000000 s hg38.chr19_GL949753v2_alt 88209 262 + 796479 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgccttccgggttcaagcaattctcatgcctcagcctccctagtagctgcgactacaggtgcgcaccaccacacctggctaattttttt-gta-ttttagtaga---gatggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca s panTro4.chr19 59021772 263 + 63644993 agtctcactctgtcacccaggctggagtacagcagcatgatcttggctcactgcaacctccgcctcccgggttcaagcaattctcatgcctcagccccccgagtagctgcgactacaggtgcgcaccgccacacctggctaattttttttgta-ttttagtaga---gatggggtttcaccgtgttggccaggctggtctcgaactcctaacctcagatgatccgcctgcctcagcctccca--gtgctaggattacaa--------------------------------gcgtgagcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898483 264 + 60714840 agtctcactctgtcacccaggctggagtatggcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccgagtagctgggactacaggcgcacaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccacggtgctgggattacag--------------------------------gcatgagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662332 264 - 106955855 agtctcactctgtcacccaggctagagtacagcagcatgatcttggctcactgcaacctccacctcccgggttcaagcaattctcatgcctcagcctcccaagtagctgggactacaggcgtgcaccaccacacctggctaattttttt-gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtctttaactcctaacctcaggtgatccgcctgcctaagcgtcccacagtgctgggattacag--------------------------------gcatgagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59946980 295 + 64156825 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacaggcatgagccaccgcgcctggccCACCCTCAAGGCATGAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54950957 263 + 59248254 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacatccggctaatttttt--gta-ttttagtaga---gacggggtttcaccatgttggccaggctggtcttgaactcctaaccttgggtgatctgcctgcctcagcctcccacagtgctggggttacag--------------------------------gcatgagcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788347 263 + 50890351 agtcttactctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgccttagcctcccaagtagctgggattacaggcacataccaccacgtccggctaatttttt--gta-ttttagtaga---gaaggggtttcaccatgttggccaggctggtctcgaactcctaaccttgggtgatctgcctgcctcagccttccacagtgctggggttatag--------------------------------gcatgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359474 266 + 49145316 agtcttactctgtcacccagggtggagtgctatggcatgatctcggctcactgcaacctccacctcctgcgttcagccagttcttacgcctcagcctcacaagtagctgggacgacaggtgcacaccaccacacctggttaactcttt--gtatttttagtggagatgatggggtttcatcatgttggccaggctggtctggaactcctgaccttaggtaattctcatgccttggcctcccaaag-gctgggattacag--------------------------------gcctgagcca i calJac3.chr22 I 2105 C 0 e mm10.chr7 3627084 1545 + 145441459 I e canFam3.chr1 19586065 483 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=613780.000000 s hg38.chr19_GL949753v2_alt 88471 273 + 796479 ccatgcccagccCAT---CCTTATTCTcagcaaggaggctattgcagtcattcagcccagac-agctggagtttgca-atggcagccatagggatggaggagaggagaagggtcCAGAGACACTCAAGAGGCGGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG s panTro4.chr19 59022035 273 + 63644993 ccatgcccagccCAT---CCTTATTCTCAGCAAGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGCTGGAGTTTGTA-GTGGCAGCCATAGGGATGGAGGAGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTCACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGATCCCATCTGCGTTGTCAGGGAAGCTCCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55898747 272 + 60714840 ccacgcccagccCAT---CCTCATTCTCAGCAGGGAGGCTATTGCAGTCATTCAGCCCAGAC-AGTTGGAGTTTGCA-GTGGCAGCCGT-GGGATGGAGGGGAGGAGAAGGGTCCAGAGACACTCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCTTGGGC-TTTAACCTGTGAGCGGTGCCACGCATTGAGAGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662596 273 - 106955855 ccacgcccagccCAT---CCTCATTCTcagcaaggaggctattgcagtcattcagcccagac-agttggagtttgca-gtggcagccgtagggatggaggggaggagaagggtccagagacattcaagaggcagaatgaaTGAGTCGAGAAGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCATGCATTGAGGGGCCCCCGGGAGACATCAGAGAACCCATCTGCGTTGTCAGGGAAGCTCCACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947275 275 + 64156825 CCGTGCCTGGCCCAC---CCTCGTTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGCTTTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951220 274 + 59248254 ccgtgcctggccCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCAGCCTAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAGGAGAAGGGTCCAGAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTTACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788610 274 + 50890351 ccgcgcATGGTCCAC---CCTCATTCTCAGCAAGGAGGCTGATGCAGTCATTCGGCCCAGAC-AGCTGGAGTTGGAGTTTGGCAGCCGTGGGGATGGAGGGAAAGAGAAGGGTCCAAAGACATGCAAGAGGCAGAATGAATGAGTCGAGAGGAGTGAATCCTGGCAGGGGTATGGGAGATGTGAAGAGCCTGGGC-TTTCACCTGTGAGCGGTGCCACACATTGAGAGGCCCCCAGGAGACATCGGAGGACCCATCTGGGTTGTCAGGGAAGCTCCACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359740 243 + 49145316 caatgcctggGCCAT--CCCTCATTCTCAGCAGGGAGGCTGGTGCAGTCATTCACCCTAGACAAACTGGAGTTTGCC-ATGGCAGCCGTGGGGATGGAGG-----------------------------GTCAGAATGAATGGGTCGAGAGGAGTGAACCCTGGCAGGGGCATGGGAGATGTGAAGAGCCTGGAC-TTTCACCTGT---CTCTACTACCTATTGAGAGACCCCTGGGAGACATCACAGCACCCATCTGGGTTGTCAGGGAAACTCCACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19586548 229 - 122678785 CCAGGCCAACCGCATGCTCCTCATTCTCACCGAGGA-GCTGATGCAGTGATGCAGCTGAG---AACCTGTGTCTGGG-GCAGAAGCCATGGGGATGG-GGGCAGGGGAAGGATTC-----------------------AACAGGACAGGAGGACCTGA---TGAGAAGGGTACAGGAGACTTGAAAAGTCTGATC-----AGCGGGGAACA-----------TGAGAGGCACCTA-CAAACATCAGTGAGCTGAGCTGGGTCACCAGGGATGCTCAGA- i canFam3.chr1 I 483 C 0 e mm10.chr7 3627084 1545 + 145441459 I e papAnu2.chr19 47083863 393 + 51301725 I a score=980645.000000 s hg38.chr19_GL949753v2_alt 88744 313 + 796479 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgaat----atataagctaaatgactgaatATATCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACCGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC s panTro4.chr19 59022308 308 + 63644993 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------AGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGGCCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899019 308 + 60714840 GGAGATGGCCCttccaggggcccggcacagggccagacacataatg---------catgctaaatgactgAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGTTCCCGGAGCCCTGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102662869 309 - 106955855 GGAGATGGCCCTTCCCGGGGCCCAGCGCAGGGCCAGAGACATAATG---------CATGCTAAATGACTGAAT----ATATAAGCGGAA-----GATTCCTTCAGCAAGCCAAAAAAGGCTGGGCATGTGGAAAGGCAGAGATTGC-------GGGGGGGCGGCAGTTTAGGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947550 312 + 64156825 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACGGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951494 312 + 59248254 GGAGATGGCCCTTCCAGGGCCTTGGCATAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATACATATAAGTGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCTGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAATGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46788884 312 + 50890351 GGAGATGGCCCTTCCAGGGCCTTGGCACAGGGCCAGACACATAATG---------CATGCTAAATGAGTGAATATGCATATAAGCGGAG-----GATTCCTTCAGCAAGCCAAGAAAGGCGGGGCGTGTGGAAAGGCAGAGATTGC--------GGGGGGCGGTAGTTTACGCCAGGGGACCCCAAAACAGGGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGATTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45359983 294 + 49145316 GGAGATGG-------AGCGGCCTGGCACAGGGCCAGACACATAGGG----------ATGCTAAATGAGTGAAT--------AAGCAAAA-----GATTCATTCAGCGAGCCAAGGAAGGCTGGGCATGTGGAGAGGCAGAGATGGC--------GGGGGGCAGTAGTTTAGGCCAGGGGACCCCAAAAC--GGGGATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTGCGGTTTAATTCCCGCTGGCGCCGCCGCCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGCCCTGAGCC i calJac3.chr22 C 0 M 682 s mm10.chr7 3628629 321 + 145441459 GGAAGAGACTACTTAGGGTGCCTGGCACAGACTTAGACCCACATGGATCTGTTCACTTGTTCAAGTACAAAaggaaagggaaaaagaag-----ga------catgaggaggaggaggaggcggtatgaggagggggtggTGTTGGCATCGGCAGCGAGGCGGCAGTTCTGGCGAGAGGACCCCCAAAT--GGGAATCCACACTTACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGTGCCTGGTACTTTCTACGATTTAGTTCCCGCTGGCGACGCCTTCGACCCCGGGCTGCCTCTTCCTCTTCATCTCGCTCCCGGAGTCCTGAATC i mm10.chr7 I 1545 C 0 s canFam3.chr1 19586777 282 - 122678785 GCACAGGGCTCTcccagtgcctt-gtatggtgcctgatacacaata---------ggtacAGAACCACTGAAC---------------------GATTCACTCAGCCAGGTAAGGAAGGC-AGGCATGTGGACA--------------------GAGAAGGGGTAATTTAGGCCAGGGGACCCCAGAACGGGGGAATCCGCACTCACCTACCTGCTCGATCTCCCGGCAGCGCCGACCTAGCACCTGGTACTTCCTACGATTTAGTTCCCGCTGGCGCCGCCGCTGGCCCCGGGCAGCCTCTTCCTCTTCATCTCGCTCCCGGAGACCTGAGCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=131739.000000 s hg38.chr19_GL949753v2_alt 89057 43 + 796479 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG s panTro4.chr19 59022616 43 + 63644993 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899327 43 + 60714840 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663178 43 - 106955855 GCCCAGACCACCTGACACAAACTCCACTTCCGTCTCCAGCTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947862 43 + 64156825 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951806 43 + 59248254 CCCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789196 43 + 50890351 ACCCAGACCCCCTGACACAAACTCCACTTCCGTCTCCAGCTCG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3628950 43 + 145441459 ACCCAGACCACCGGACACAAATTCCACTTCTGTCTCTAGCTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19587059 43 - 122678785 ACCCAGACCCCCGGACACGAACTCCACTTCCGTCTCCAGCTCA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45360277 682 + 49145316 M e papAnu2.chr19 47083863 393 + 51301725 I a score=575990.000000 s hg38.chr19_GL949753v2_alt 89100 174 + 796479 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc s panTro4.chr19 59022659 174 + 63644993 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGAGGCAGGGAAAGGCTCAGGggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899370 174 + 60714840 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggctctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663221 174 - 106955855 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGctcaggggccctggatcctggacccccagccccttctcccactgaaccaggagcccagacccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59947905 174 + 64156825 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54951849 174 + 59248254 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCCGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGGTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789239 174 + 50890351 CTCTCCAGGATGTGGCCCCCAAATAGGGGAGGCAGCGCCAACTCCGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCTGAGGGGCAGGGAAAGGCTCAGGggccctggatcctggactcccagtcccttctcccactgaaccaggagcccaaacccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45360959 174 + 49145316 CTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGTGGCGCTGAAAACTCCTCAAAGCCCACGGCTGCCATGGTCCTAAGGGGCAGGGAAACGCTCAGGGGCCCTGGATCCTGgattctcagcccctcttcccattgaaccagcagcccaaacccc i calJac3.chr22 M 682 I 513 s mm10.chr7 3628993 170 + 145441459 CTTTCTAGGATGTGGCCACCAAACAGGGGAGGCAGAGCCAGCTCTGAGCCTGGTGGCGCTGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAGGGCCAAGAA--GTTTTAGGAGCCTATATTCTGGCTCTCCAAGTCC--CTCCCAGGGGGACTTAGGTCCAGGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587102 135 - 122678785 CTCTCCAAAATGTGACCACCGAACAGCGGCGGCAGCGCCAGCTCCGAGCCTGGCGGCGCCGAGAACTCTTCAAAGCCCACGGCTGCCATGGTCCTGTAAGGTCAGTAG--GTTCAGGA-------ATCCTGAACCACCGGCCCC------------------------------ i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=-11311.000000 s hg38.chr19_GL949753v2_alt 89274 4 + 796479 aa-------------------------------------cc s panTro4.chr19 59022833 4 + 63644993 aa-------------------------------------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899544 41 + 60714840 aaccccttttccctcagacctgggagtccaggcccccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102663395 41 - 106955855 aaccccttttccctcagacctgggagtccaggcccccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948079 4 + 64156825 ag-------------------------------------cc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952023 4 + 59248254 ag-------------------------------------cc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789413 4 + 50890351 ag-------------------------------------cc i chlSab2.chr6 C 0 I 148 s calJac3.chr22 45361646 4 + 49145316 ag-------------------------------------cc i calJac3.chr22 I 513 C 0 s mm10.chr7 3629163 2 + 145441459 AG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19587237 4 - 122678785 AG-------------------------------------CC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=2904465.000000 s hg38.chr19_GL949753v2_alt 89278 1046 + 796479 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gctcccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctccta-gtctgtcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACTAACGCT-------------------AGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-CGGGGAGCGGGAGGC s panTro4.chr19 59022837 1065 + 63644993 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccagaagtccaagtccgcaacccacccttcgcagcacccacagggttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcggtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCGACCTCTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGGGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCTGCTTAGCAGGATCGGTCCACAGCGGGACGTGAGT---------CCCTTTCCTCCTCGCGGCTTACGGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAAGAACATCGCAA--GCGGGGACCAATCAGAGAGTAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACTAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACCA-GGGGGAGCGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55899585 1065 + 60714840 cctcctccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-cccttctctctcagacccaggagtccaagtgcgcaactcccccttcgcaacacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-caggcagtccaagccccaaccctcaaccagacgcaagagtcctggcttccagcctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTGCACTGTTTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAATCTGTTCAATCTGTAGGTTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGCAGCCGAGGACGGCGGGACGTGGCC-CTAGACCTTGTGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCGGCCCACCCCCACGTCCACCCCGAAT----CCCTGCATAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGT---------CCCTTGCCTCCTCGCGGCTTACCGCCTCTTTCCGCCTAGTGCCAGGTGTTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACTAATCAGAGA-TAGCTTTGCCTCTATAACGGCGCGAGAATGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGGGGGGAGCGGGAGGC i ponAbe2.chr19 C 0 M 672 s nomLeu3.chr10 102663436 1148 - 106955855 cctcttccc--------------------------------------------------------------------------tgagatcctagaatccaggcccccagcccctcctccctc---agaccgtagaatcca-gcccccag-ccctcctccctcagacccaggagtccaagtccgcaaccccgctttcgcagcacccacaaagttcaagccctgaccccc-tcctcccaggatgcaagagtccagacctccagactttgtctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctaaccttctcctccctcagGAT-----------GACCCCAGT----CCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAAGGTCCATGAAGCAGTTGCATCTAAGGTCCCAGTCCAGACCCCAGTCCATAAAAGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGCGTAAAAGCTCATAATGATTGCATAC-AATGCAGCTGCACTGTCTTCTGGGATTCGCACTTTTTCACAAGGGCTCAGCCACATACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCAGAGCTTCCAACCTCTTCAATCTGTAGGTTAAGCCCTTCGCAAAACTACTTGTCCCATCAGGGTCAGCAGCCGAGGACAGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTCCCTGTTTCCGGCTTCGCT-------TCGGCCTACCCCCACGTCCACCCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGCCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGTCCCGTCGTCCGGCCACAGCGATTCTCCGCTTAGCAGGATCGGTCCATAGCGGGCCGTGAGT---------CCCTTTCCTCCTCGCGGCTTACCGCCTCTCTACGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAATGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAAAGTAGCTTTGCCTCTATAACGGCGCGAGAGTGAGACGTCATCGGTGAGCGACGAACGCTCTGGGAAAGCTTATTTCCTAGAAATAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATCGAGACAAGAAGGGAGCGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59948083 1159 + 64156825 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagcagtc---caaacccctagccttctcctccctcaggatgcaccagtccagaccccAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGCGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCGGAGAGGAGAGGTGAGTGTGATGGAGACGAGCGGGGAGCGGGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54952027 1159 + 59248254 ccttttccctaagacctgggagtccaggcccccagctcctaatccctcagaccctagaatccaggcccccagcccctcctccctcagacccagggatccaggcccccagcccttcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgaccccc-tcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcaaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCAGTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGGTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCGGGCCTCTTAGCTTCCAACCTCTTAAATCTCTAGATTAAGCCGTTCACAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCAGGACGTGGCC-CTAGGCCTTGTGGGAGTTGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACGTCCAACCCGAAT----CCCTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGGCCAGGAACATCGCGA--GCGGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAGCGACAAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagacgagcggggagcgggaggC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46789565 1078 + 50890351 cctcctccc--------------------------------------------------------------------------tcagatccagggatccaggcccccagcccctcctccctc---agaccgtagaatccaggcccccag-ctctcctccctcagacccaggagaccaggtccccaacccctccttcgtagcacccacagggttcaagccctgacccccgtcctcccaggatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagccccaaccctcgaccagacgcaagagtcctggcttccaacctcctc-gtctctcagatccagCAGTC---CAAACCCCTAGCCTTCTCCTCCCTCAGGATGCACCAGTCCAGACCCCAGT----CCATAAA---------------------------------------------------------------------------------AGGGTTCAAAG--------GTTGCATGAACTACAACCCCCATCAGACCTCAGTGTAAAAGCTCAT-ATGGTTGCACAC-AATGCAGCTG--CTGTTTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCTTCTCTCTGCTCCAATTCCATCTC---CGCGACCTCCGGAAGCCCCAGGCCTCTTAGCTTCCAATCTCTCAAATCTCTAGATTAAGCCGTTCGCAAAACTACTTGTCCCATCAGGCTCAGGGGCCGAGGACGGCGGGACGTGGCC-CTAGGCCTTGTGGGAGTCGTAGTTTCCTGTTTCCGGCTTCGCT-------TTGGCCCACCCCGACATCCAACCCGAAT----CCTTGCTTAAAGGCCTTGCTTTCTTGTCTAACGTCGCAACCAGTCCTCTGAGTTGCCAACGTCTTTCTTCTTGTCTCGACGCCCCGTCATCTGGCCACAGCAATTCTCCGCTTAGCAGGATTGGTCCACAGCGGGCCGTGAGTTCGATTAGCCCCTTTCCTCCTCGCTGCTTACCGCCTCTCTCCGCCTAGTGCCAGGTGCTAATAAAGTTGTTGTTTCAAACGCGTCCAGGAACATCGCGA--GCAGGGACCAATCAGAGCGTAGCTTTACCTCTATAACGGCGCGAGCATGAGACGTCATCGGTGAACGACGAACGCTGTGGGAAAGCTTATTTCCTAGAAACAGTGGTGCGCggagaggagaggtgagtgtgatggagaccagcggggagcgggaggC i chlSab2.chr6 I 148 C 0 s calJac3.chr22 45361650 1083 + 49145316 cctcctcct--------------------------------------------------------------------------tcagaccctagaatcca-gcccccagcccctcctccctcagaagacccaggagtccaggtactcagcccctcctgccacagacccaggagtccaggtccccagcccctccttcccagcacccacagggttcaagccctgatcccc-t-ctcccaagatccaagagtccagacctccagactttttctctccaaggacc-cagggagtccaagtcccaaccctcacctagacgcaggagtccagggttccaacctcctc-gtc--tcagatccagcagta---caaacccctagccttctcctctctcgggatgcaccggtgcagacctcagc----ccATAAA---------------------------------------------------------------------------------AGGGTTCTAAGGTAAAGCTGCTGCAAGAACTACAACCCCCATCAGCCCTCAAAGTAAAAGGTCAT-ATGGTTGCACACAAATGTAGATGCAGTGTCTTCTGGGATTCGCAGTTTTTCACAAGGGCTCAGCCACTTACCCCTCTCTCTGCTCCAATTCCATCTC---CGCGAGCTCCGGGAGCCCCGCGCCTCACAACTTCCAACGTCTCAAATCTCTATGTTAAGCCGTTCCCAAAACTACTTGTCCCATCAGGCCCCGCGGCCGAGGACGGCGGGACGTGGCT-CTAGACCTTATGGGAGTTGTAGTTTCTTGTTTCCGGCTTCGCT-------TCCGCCAACCCCCACGTCCACCGCGAAT----CCCTACTTAAAGGCCTTGCGTTCTCATCTGAGGCCGCAACCAGTCCTCTGAGTTGCCACAGTCTTTCTTCTTGTCTCGATGCCCCGTCGTCCAGCCACAGCGATTCACCGCTTAGCAGGATCGGTCCACAGCGGGCCGTGAGTCTGATTAGCCCCT---CTCCTTGCTGCTTACCGCCTCTCTCCGCCTAGCGCCAGGTGCTAATAAAGTTGTTGTTCCAAACGCGGCCAGGAACGTCGCGA--ACGGGGACCAATCAGAGATCAGCTTTCCCTCGATAACGGCGCGAGTGTGAAACGTCATCGGTGAGCGACGAGCGCTCTGG--AAGCTTATTTCTTAGAAACCGTGGTGCGCAGGGAGGAGAGGTGAGTGTGGTAGAAACGAGGAGAGGGCGGGAGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3629165 926 + 145441459 -----------------------------------------------------------------------------------------CCTGGAGCCCAGATCCTAGCCCTCTCCTCCATC---ACACCCAGCAGCCCA-GACTCTAG-CCCTCCTCCCTCCTACCAAGAAGCCCAGACCCT--AGCCCTTCTTGGTCACTGCCA-GGGATCCAGGCCCCAGTCCTC-GTCCCTAACAAT---------------------------------GAGGAAT-CAG---ACCCTAGCCTCCTCCCTC----AGACTTTGGAGCCCACAC-TCCAATCTCCTT-G-CTCTCAGATCCATAAGAACAGCAAATTCCAAA------TCTCCCCTACGATGCTCCAGTACTGCCTCCGGTTCTCCCACAGA-----------------------------------------------------------------------------------GATTCGAAAAGAAAGCAACTGCACGAACT----TCCCCATCGTCCCTGAGAGCA-------CT-ACAGCCG------ATCGTTGCTG------TTTTTGGAGTCCCCG--TTTACACAA-AGCTCAGCTACTCACCCCTCTCTCTGTTCCAACTCCATTTC---TCTGGTCAAGAGACACCTCAAGCCTCAGAG---------------------AGGTGGAGTCTTGCGCAAAACTACCTCTCCCATCAGGCCTTGCGACACAGGAAAAC----------------------TGGGAATTAAAGTTTCCTA-CTCTGCCTTCGTT-------TGCACCCG-----------ACTCCAAAT----TGCGGCTTGAAGCCTTCGGTTTATCCTCTAGCGCCTGCACCGATCGTCCACGTTGTCACCTTCTTTACTCCTGTCTTGTCGCAGTGTCGACTAGCCAAAGCGAATCTCTGTTTAGCAGGCTCAATCCACGGCGACGTACGACTTCCCCTAGCCCTAGAACCCAGCACTCCCGGTCGCCGTCCCGCGA-----GGCGGCTGCTAATAAAGTTGTTG-TCCAAACGCTGCCGGAAATGTCGTAA--ACGG---CCAATCAAAACACAGATTTATCG----------GCGGCAAGTAAACGTCATCAAAGAGAGCCGAA-GCTCTGGGGAAGCAGATTTCTTGGAAACGATTGTGAGAGGATCGAAGCGGTGAGTGTGATGGAGAAGAAGGGATGGCCGGAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19587241 1015 - 122678785 TCTCCTCCC--------------------------------------------------------------------------TCAGCCCCGGGAGTCCAGATCCCCAGCCCCTCCTCCCTC---AGACCCGGGAGTCC-----------CACT-----------------------------------------------------AGAGTTCGAGCCCCGACCCC--TCCTCCCAGGATCCAGGTGTCCATACCCCCAGACTT--GCTCCCCGAGGATCGCAGGGACTTCAAGCCCCCACTC------AGACCCAGGAGCCGGGGCCTCCAACCTCGTCTGTCTCTCAGATTCAGAACTC---C-AACTCCTAGCTTTTTTCCCCCT--GGACGTCCAAGCGCAGACCCCGGT----CCTTAAG---------------------------------------------------------------------------------AGGGCTC--AGCGAAAGCAGCTGCATGAACTACAATCCCCATCCGCCCTCAA-ATAAAAGCGCAG-ATGGGTGTACGC-GATGCAGCCGCAATGCCTTTTGGGAGCGGTAGTTTCCTCCAA------AGCCACTCACCCCTCTCTCTGCTCCAATTCCATGTCTCTCTCCAGCTCCAGCCGCCGCGGGTCTCAGAACGCCCAGCCTCGCAAACCTCTAGGTTAAGTCCTTCGCAAAACTACCTGTCCCATCGGGCTTCACGGCCTCGGCATCCGGGTCATTGCCGCTGGGTTTTCTGGGAATTGTAGTTCCCTGCTTCCGGCTTCGCTCCTTACCCCCGTCCACCTTCACCTCCACCCGGAGTTCCGCCCTGCTTAAAGGCCTTGCTTTCTCATCTCACTCCTTCCTCGGTCGTCTTAGTTGTCCCCGTCTTTATTCTTGTCTGGGCACCTTCTCA-CTGGCTAGGGCGATGCTCCGCTTAGCAGGCTCAGTACTCGGCGGGCCGTCAGCCCGACAAGTCCCTT--CTCCT--CTGCTTACC-CCCCTCTCCGCTTCGCTGCAGGAACTAATAAAGTTGTTGTTCCAAAGGCGTCCGGGAATGACGCGAGGGCGGGAGCCAATCAGAGCGCGGGTTTGACGCGACGCCGTCGCGAGCCTGGGACGTCATCAGTGGGCGCCGACCACTGTTCGGAAGCGACGCTCCTAGAAACCGTCGTGCGAGGCGGGGAGAGGTGAGTGTAAGCGAGACGAGGGGAGTG-GGGAGGC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47083863 393 + 51301725 I a score=62517.000000 s hg38.chr19_GL949753v2_alt 90324 29 + 796479 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT s panTro4.chr19 59023902 29 + 63644993 TGGGCTCCTGGGTCTGGGAGAAGAAGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664584 29 - 106955855 CGGGCTCCTGGGTCTGGGAGAAGAAGCGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949242 29 + 64156825 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953186 29 + 59248254 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790643 29 + 50890351 CGGACTCCTGGGTCTGGGAGAAGAAGTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362733 25 + 49145316 CAGACTCCTGGGTCTGGGAGAAGA----C i calJac3.chr22 C 0 C 0 s mm10.chr7 3630091 23 + 145441459 CAAGCTA------CTGGAGGAGAAAGTGT i mm10.chr7 C 0 I 232 s canFam3.chr1 19588256 29 - 122678785 CGGGCTCTCGGGTCCGGGGGCGGGAGTGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=42275.000000 s hg38.chr19_GL949753v2_alt 90353 21 + 796479 GTGAGGAAAAAGGCGGGTCTT s panTro4.chr19 59023931 21 + 63644993 GTGAGGAAAAAGGCGGGTCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664613 21 - 106955855 GTGAGGAAAAAGGCAGGCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949271 21 + 64156825 GTGAGGAGGAAGGCGGGCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953215 21 + 59248254 GTGAGGAGGAAGGCGGGCCTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790672 21 + 50890351 GTGAGGAGGAAGGCGGGCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362758 21 + 49145316 GTGAGGAGAAAGGCGGACCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19588285 21 - 122678785 GCAGGGAGAGAGACACACCTT i canFam3.chr1 C 0 I 1428 e mm10.chr7 3630114 232 + 145441459 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=434896.000000 s hg38.chr19_GL949753v2_alt 90374 262 + 796479 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctgactaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc s panTro4.chr19 59023952 262 + 63644993 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcgttctgttgcccaggttggagagcagtggcgcgatctcggctcattgcaacctccgtctcccgggttcaaacgattcttctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccttgactaatttttgtatttttagtagagacggggtttccccatgttggtcaagctggtctcgaactcctgatctc--gtgatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102664634 262 - 106955855 TACAGCTTGGtttttgtttttttgttgtttgtttgttttgagacggagtctcggtctgttgcccaggttggagagcagtggcgcgatctcggctcactgcaacctccgtctcccgggttcaaacgattctcctgcctcagcctccagagtagctgggattacaggcgcccgccaccacccctggctaatttttgtatttttagtagatacgtggtttccccatgttggtcaggctggtctcgaactcctgatctc--gtgatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949292 262 + 64156825 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctagggtggagtgcagtggcgctatctcggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953236 262 + 59248254 TACAGCTTGGtttttttgttgttgttgtttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcactgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagaatggctgggattacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790693 258 + 50890351 TACAGCTGGGtttttttgttgttg----ttgtttgttttgagacggagtctcggtctgttgcctaggttggagtgcagtggcgcgatctcggctcattgcaacctccgtctccagggttcaaacgattctcctgcctcagcctccagagtagctgggatgacaggcgcgcgccaccacgcccggctaatttttgtatttttagtagggacgaggtttccccatgttggtcaggctggtctcgaactcctgatctc--ttgatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45362779 247 + 49145316 TACAGtttgtttgttttttt---------------tcttgagacggagtctcactctgttgccccggct-gagcgcagtggcgcgatctcggctcactgcaacctccgcctcccgggttcaagcagtt-tcctgcctcagcctcccgagtagctgggataacaggcgcacggcaccacgcgcagctaatttttgtatttttagtagagacggggtttccccatgttggtcaggctggtgtcgaactcctgaccccaggtgatcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e ponAbe2.chr19 55900650 672 + 60714840 M e papAnu2.chr19 47083863 393 + 51301725 I a score=127922.000000 s hg38.chr19_GL949753v2_alt 90636 57 + 796479 gcccgcctcggcctcccaaagtgctgtgattacaggcatga-tccaccgcgcctggcc s panTro4.chr19 59024214 57 + 63644993 gcccgcctcggcctcctaaagtgctgtgattacaggcatga-tccaccgcgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901323 58 + 60714840 gcccgcctcggcctcccaaagtgctgtgattacaggcgtgaccccaccgcgcctagcc i ponAbe2.chr19 M 672 C 0 s nomLeu3.chr10 102664896 57 - 106955855 gcccgcctcggcctcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949554 57 + 64156825 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtgc-cccaccgcgcctggcA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953498 57 + 59248254 gcccgcctcggcgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46790951 57 + 50890351 gcccccctcgacgtcccaaagtgctgtgattacaggcgtga-cccaccgcgcctggcA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45363026 57 + 49145316 tcccacctcggcctcccaaagtgctgggattacaggcgcga-gacaccgagcctggcc i calJac3.chr22 C 0 I 3219 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e papAnu2.chr19 47083863 393 + 51301725 I a score=1311539.000000 s hg38.chr19_GL949753v2_alt 90693 751 + 796479 AG---------ttgtttgtttgttttgtctgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacctccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacggggtttcactatgttggccaggctggtctccaactcctgacctcagatgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggccTTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc s panTro4.chr19 59024271 736 + 63644993 AA---------ttgtttgtttgttttgtctgagacgaagtttcgctcttgttgcccaggctggagtgcagtggcgcgatctcggttcactgcaacttccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctagttttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccaccgctcccggc-TTTTACAGCCTGtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttcgctaccctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagcggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccggacgccatggctcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccag--------------cctgagcaacacagtgagaccctgtctctacagaaaaatttaaaaattagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55901381 760 + 60714840 CAGttgtttgtttgtttgtttgctttgtctgagacgaagtttcgctcttgttgcccaggatggagtgcagtggcgcgatctcggttcactgcaacctcctcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcaccaccacacccagctaattttttgtatttttagtagagacagagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctgggcctcccaaagtgctgggattacaggcatgagccactgcccctggccTTTTACATCtcgtttacccaaaagtcttaatatgcgcctaccatggtgtggccctggggatgtggaaggagcaaaaattgttccctgctctcttagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcgtgcgggacacgttatcacaaagcaacctcctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaagagagccagacgccatggctcactcctgtaatcccagcactttgggtggcccaggcaaaaggatcacttgagcccagaagttggagaccagcctgagcaacacagtaagaccctgtctctacagaaaaatttaaaaattagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102664953 748 - 106955855 AG-----ttgtttgtttgtttgttttgtccgagacgaaatttcgctcttgttgcccaggatggagtgcagtggtgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcgcaccaccacacccagctaattttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaacccctgacctcaggtgatccacccgcctgggcctctcaaagtgctgggattacaggcatgagccaccgcgcctggccTTTTACAGCTTGTTTACCCAAAAGTCttaatatgcgcctaccatggtgtggccctgggaatgtggaaggagcaaaaattgttccctgccctcttagagcttcggttgatgcct----gaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgacgtgccttactgtagacaggcagagcgtgcaggacacg-tatcacaaagcaac--cctgtagtctagagtggggcgtgtgggtcagggaggtggaacgtgagagctgaaggctgaggagatgctgggctactaagaagtgaggagagccagacgccatggctcactcctgtaatcccagccttttgggtggcccacgcaaaaggatcgcttgagcccaggagtttgagaccaacctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59949611 754 + 64156825 Ag----tttgtttgtttgtttgttttgtttgagtcgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagccacccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctgcccggctgcgcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54953555 754 + 59248254 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttcaatggcgcgatctcggttcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacacccggctaattttttgtatttttagtagagacagggtttcaccatgttggccagactggtctcgaactcctcacctcaggtgatctacccggctgggcttcccaaagtgctggaattacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCTAAAAGTCttaatatgctcctaccatggtgtggccctggggatgtggcaggagcaaaaattgttccctgccctctaagagctttggttgatgcctggcagaca--------------------------------------------------------------ggctttatcaaataattacttcattaatcacaaatgtgtgaagtgccttactgtagacacgcagagcctgcgggacacg-tatcacaaagcaacctcctctagtctaaag-ggggcccgtgggtcagggaggtggaatgtgagcgctgaaagctgaagagatgctgggctgctaaggagtgaggagagccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccgtctctacagaaaaatttaaaaattagc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46791008 816 + 50890351 AG----tttgtttgtttgtttgttttgtttgagacgaagtttcactgttgttgcccagaatggagttaaatggcgcgatctcggttcactgcaacctccgcctcccgggttcaagcgattttcctgcctcagcttcctgagtagctgggactacaggcgcccaccaccacacctggctaattttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaacgcctcacctcaggtgatccacccggctgggcttcccaaagtgctggaatgacaggcatgagccaccgtgcccggccTTTTACAGCTTGTTTACCCAAAAGTcttaatatgggcctaccatagtgtggccctggggatgtggcaggagcaaagattgttccctgccctcttagagcttTGGTTGATGCCTGGCAGACAGGCTTTATCAAATAAtttttttttttttttttttttGACGGANNNNNNNNNNGCGCCCGGCCGGCTTTATCAAATAATTACTTCATTAATCACAAATGTGTGAAGTGCCTTACTGTAGACACGCAGAGCCTGCGGGACACG-TATCACAAAGCAACCTCCTCTAGTCTAAAG-GGGGCCCGTGGGTCAGGGAAGTGGAATGTGAGCGCTGAAAGCTGAAGAGATGCCGGGCTGCTAAGGAGTGAGGAGAgccagacgcggggggtcactcctgtaatcccagcactttgggtggcccaggcgaaaggatcgcttgagcccaggagtttgagaccagcctgagcaacacagtgagaccccatctctacagaaaaatttaaaaattagc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I e papAnu2.chr19 47083863 393 + 51301725 I a score=512817.000000 s hg38.chr19_GL949753v2_alt 91444 239 + 796479 cgggcgtgctggtgcgtgcctgtcatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtgatcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaa-----aacaaagtgaaggaaag---------ggccactttagttacaagggactcc-tgtacaaagacctggaggcgggaagagaccg s panTro4.chr19 59025007 244 + 63644993 cgggcgtgctggtgtgtgcctgccatctcagctatcgggaggctgaggcgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcgccactgcactgcagcctaggtgacagagcaagacatggtctcaaaaaaaagaaaaga-----------------aaagaaaagaaaaaacaaagtgaaggaaag---------ggtcactttagttacaagggactcc-tgtacaaagacctggaggtgggaagagaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902141 231 + 60714840 caggcgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaatctcttgagcccaggtggtcgaggctgcagtgagctatgatggcaccactgcactgcagcctaggtgacagagcaagacattgtctcaaaaa---------a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaagagagtccttgtacaaagacctggaggtgggaagagactg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665701 237 - 106955855 cgggcgtgctggtgtgtgcctgtcatctcagctatcgcgaggctgaggtgggagaatcgcttgagcccaggtggtcgaggctgccgtgagctatgatggcaccactgcactgcagcctaggtgacaaagcaagacattgtctcaaaaaaaagaa---a-----------------aaagaaaa-----aacaaagtgaaggaaag---------agccactttagttacaaaggactccttatacaaagacctggaggtgggaagaaattg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950365 248 + 64156825 cgggtgtactg--gtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaaaaaag------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954309 246 + 59248254 cgggtgtactggtgtgtgcctgtcatctcagctatcgggaggctgaggtgggagaaccgcttgagcccaggtggtcgaggctgcagggagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtctcaaaaaaaaaaaaaaga----------------aaagaaaagaaaaaacaaagcgaaggaaag---------agccaccgtagttacaagggactccttgtacaaagatctggaggtgggaagaaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084256 271 + 51301725 CGGGTGTGTTGGTGTgggcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgagcccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcaagacattgtttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaagaaaagaaaaaacaaagcgaaggaaaaaaCGACCTTAGTGACCTTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAAAAATTG i papAnu2.chr19 I 393 C 0 s chlSab2.chr6 46791824 229 + 50890351 cgggtgtgctggtgtgtgcctgtcatctcagctatcgggaggctgaggcgggagaaccgcttgaccccaggtggtcgaggctgcagtgagctatgatggcgccacagcactgcagcctaggtaacagagcatgacattgtctccaaaaaaaaaaaaa------------------aaagta---------------gaaggaaag---------aGCCACCGTAGTTACAAGGGACTCCTTGTACAAAGATCTGGAGGTGGGAAGAAATTG i chlSab2.chr6 C 0 I 313 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=1782035.000000 s hg38.chr19_GL949753v2_alt 91683 769 + 796479 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaggaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaggctggggagaggggcttaaaaaggggaactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacctggagcatgggctggtgtcaagtcaacaatggccacgttgtagattgatcgccttgaggtgatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgcgccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtatctagtgggaaaggagggaaacaaagaattt s panTro4.chr19 59025251 768 + 63644993 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtggggggtggtgaaagtaaagcagctttactgatcaaatgctcgcagatgagaaatggccaagctaatgtctttagaagaccatttcaagctttaagctggggagaggggcttaaaaaggggcactttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccgaaggctgtcttgagtcacgggccacccggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggcttacgcctgtaatcccaacagtttgggaggccaaggtgggtcactcacttgaggtcaagagttcaagaccagcctggcttacatagtgaaaccttgactctac----aaaaaaaaaaaa---------------aaaaa-ttagctgggcatggcggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgtttgaacccaggaggtggaggttgcaagtgagccaagactccaccactgcactccaacctgggtgtcagagccagactccatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55902372 766 + 60714840 ATAAtgtaaccaactc--gtttctgctattcagaggc------agaagaagttgggggtggtgaaagtaaagcagctttattgatcaaatgctcgcagatgagaaatggccaagctgatgtctttcaaagaccatttcaaactttaggctggggagaggggcttaaaaaggggaattttgaatgggaggcatacaggagtggtgctgggtacaaggtatgtgtgtcttgctccaaaggctgtcttgagtcacgggccacccagagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgtcttgaagtaacctctggagttttgcagctgtgtttccatacctagtttgtttcaagattagcccctgcggcgaggcgcggtggctcacgcctgtaatcccaacggtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgattctac----aaaaaaaaaaaa----------aatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgctcgaacccaggaggtggaggttgc-agtgagccaagactgtgccactacactccaacctgggtgtcagagccagactccatctttaaaa-aacaaat-----aagattagcccctggaacttctaagtaagcacatagataagccagcagtgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102665938 784 - 106955855 ATAAtgtaaccaactcaagtttctgctactcagaggc------agaagaagtgggaggtggtgaaagtaaagaagctttattgatcaaatgctcgcagttgagaaatggccaagctaatgtctttaaaagaccatttcaaactttaggctggggagaggggcttaaaaaagggaactttgaatgggaggcctacaggagtggtgctgggtatgaggtatgtgtctcttgctccgaaggctgtcttgagccatgggccacctggagcatgggctggtgtcatgtcaacaatggccaggttgtagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacctagtttgtttcaagattagcccccgcggcgaggcgctgtggttcatgcctgtaatcccaacagtttgggaggccaaggtgggtcgctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaaccttgactctac----aaaaaaaaaaaaaaaaaaaagaaatgcaaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcaagtgagccaagactgtgccactgcactccaacctgggtgtcagagccagactcaatctttaaaa-aataaataaataaagattagcccctggaacttctaagtaagcacatagagaagccagcagcgcaagacagtgtctagtgggaaaggagggaaacaaagaattt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59950613 762 + 64156825 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcaggaaacaaagaattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54954555 762 + 59248254 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattaatcaaatggtcgcaaatgagaaatggccaagctaatgtctttaaaagaccgtttcaaactgtaggctggggagaggggcttaaaaaggggaactctgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtctttctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatggccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacgtagtttgtttcgtgattagcccctgcggccaggcgcggtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactctac----------aaaaaa---------------aaaaaaatagctgggcgtggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47084527 760 + 51301725 ATAATGTAACCAACTCAAGTTTCTGCTACTCAGAGGCTAGAATAGGAGAAGTGAGGGATGGTGAAAGTAA---AGCTTTATTGATCAAATGGTCACAGATGAGAAATGGCCAAGCTAATGTATTTAAAAGACCGTTTCAAACTGTAGGCCGGGGAGAGGGGCTTAAAAGGGGGAACTCTGAATCGGAGGCATACAGGAATGGTGCTGGGTACAGGGTATGTGTGTCTTTCTCTGAAGGCTGTCTTGAGACA---GCCACCTGGAGCATGGGCTGGAATCATGTCAGTAATGACCAGGTTTTAGATTGATCACCTTGAGGTAATCTCTGGAGTTTTGCAGCTGGGTTTCCATACCTAGTTTGTTTCGAGATTAGCCCctgcggccaggcgcagtggctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaagagttcaagaccagcctggcttacatggtgaaactttgactttac---------aaaaaaa---------------aaaaaaatagctgggcgtagtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgt-attgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaa----aaataaacaaagattagCCCCTGGAACTTCTAAGTAAGCACATGGATAAGCCATCAGTGCAAGACAGTGTCTAGTGGGAAAGGCGGGAAACAAAGAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46792366 776 + 50890351 ATAAtgtaaccaactcaagtttctgctactcagaggctagaataggagaagtgaggggtggtgaaagtaa---agctttattgatcaaatggtcgcagatgagaaatggccaagctaatgtctttaaaagaccatttcaaactgtaggctggggagaggggcttaaaaaggggaactttgaatcggaggcatacaggaatggtgctgggtacagggtatgtgtgtcttgctctgaaggctgtcttgagtcatgggccacctggagcatgggctggaatcatgtcaataatagccaggttttagattgatcgccttgaggtaatctctggagttttgcagctgggtttccatacccagtttgtttcgagattagcccctgcggccaggcgcggtagctcacgcctgtaatcccaatggtttgggaggccaaggtgggtccctcacttgaggtcaggagttcaagaccaccctggcttacatggtgaaactttgactctacaaaaaaaaaaaaaaaa---------------aaaaaaatagctgggtgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgt-agtgagccaagattgtgccactgtgctccaacttgggtgacagagccagactccatctttaaaaaaataaataaataaagattagcccctggaacttctaagtaagcacatggataagccatcactgcaagacagtgtctagtgggaaaggcgggaaacaaagaattt i chlSab2.chr6 I 313 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I e calJac3.chr22 45363083 3219 + 49145316 I a score=279425.000000 s hg38.chr19_GL949753v2_alt 92452 95 + 796479 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA s panTro4.chr19 59026019 95 + 63644993 caaagtatgttttcaaggctaaaggcaagaaagg--aataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903138 94 + 60714840 caaagtatgttttcaaggctaaaggaaagaaagg---ataagaaagtttgcaaatgcatttggaatctacaccacttggttccaGTAAGTCTTAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666722 95 - 106955855 ctaagtgtgttttgaaggctaaaggaaagaaagg--aataagaaagtttgcaaatgcatttggaatctatgccacttggttccaGTAAGTCTTAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951375 95 + 64156825 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955317 95 + 59248254 cagagtatgttttcaaggctaaaggcaagaaagg--aaaaaaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085287 95 + 51301725 CAGAGTATGTTTTCAAGGCtaaaggcaagaaagg--aaaaaaaaagtttgcaaatgCATTTGGAATCTACACCACTTGGTTCCGGTAAGTCTTAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793142 95 + 50890351 caaagtatgttttcaaggctaaaggcaagaaagg--aaataaaaagtttgcaaatgcatttggaatctacaccacttggttCCGGTAAGTCTTAGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366302 97 + 49145316 caaagtatgttttcaaggctaaaagcaagaaaggaaaaaaaaaaagtttcaaaatgcatttggaatctaagccacttgatgacaGGAAGTCTTAGCA i calJac3.chr22 I 3219 C 0 e mm10.chr7 3630114 232 + 145441459 I e canFam3.chr1 19588306 1428 - 122678785 I a score=144139.000000 s hg38.chr19_GL949753v2_alt 92547 54 + 796479 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc s panTro4.chr19 59026114 54 + 63644993 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacaggtcggagctggagac-tc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903232 54 + 60714840 AGGTGGCGGTCATAGGGgtgtgctgcgtcttgcacatgtcagagctggagac-tc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102666817 54 - 106955855 AGGTGGTGGTCATAGGGgtgtgctgtgtcttgcacaggtcggagctggagac-tc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951470 54 + 64156825 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955412 54 + 59248254 AGGTGGCGGTCGTAGGGGTGTGCtgtgtcttacacaggtcggagctggagac-tc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085382 54 + 51301725 AGGTGGCGGTCGTAGGGGTGTGCTGTGTCTTGCACAGGTCGGAGCTGGAGAC-TC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793237 54 + 50890351 AGGTGGCGGTCGTAGGGgtgtgctgtgtcttacacaggtcacagctggagac-tc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366399 20 + 49145316 GGGTGGAGGTCGCAGGGATA----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3630346 55 + 145441459 AGGTGGTACCTGGAGGGATGTGCTGTGTTCTGTGTGGGTAGGAACAGGAGACAAC i mm10.chr7 I 232 C 0 e canFam3.chr1 19588306 1428 - 122678785 I a score=68613.000000 s hg38.chr19_GL949753v2_alt 92601 23 + 796479 gccagtgaacaaaacaaactaaa s panTro4.chr19 59026168 23 + 63644993 gccagtgaacaaaagaaactaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55903286 23 + 60714840 gccagtgaacaaaacaaactaaa i ponAbe2.chr19 C 0 I 724 s nomLeu3.chr10 102666871 23 - 106955855 gccagtgaacaaaacaaactaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59951524 23 + 64156825 gccagtgaacaaaacaaactaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955466 23 + 59248254 gccagtgaacaaaacaaactaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085436 23 + 51301725 gccagtgaacaaaacaaactaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793291 23 + 50890351 gccagtgaacaaaacaaactaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366419 4 + 49145316 -------------------TAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630401 20 + 145441459 CTCCGTGAACTAAGCAAGCT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19589734 23 - 122678785 gccaaagaacaaagcaaaagaaa i canFam3.chr1 I 1428 C 0 a score=946469.000000 s hg38.chr19_GL949753v2_alt 92624 247 + 796479 gcacctgttgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAACGCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg s panTro4.chr19 59026191 247 + 63644993 gcacctgtcgtcgtggagcctgcat---gctagtggggttgataaa-GAAGGACC---AGGGTCTTCTGGGAGAGAATCATCGCTCAGTAATAAGGAGGGAGTTTGTCGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaagaggagccagcgatcgagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904033 247 + 60714840 gcacctgtcgtcatggagcctgcat---gctagtggggttgagaaa-gaAGGACC---AGGGTCTTCTGGGGGAGAATCATCGCTCAGTAATAAGGAGGGACTTTATTGGGGCAAGTTTTTAGGGAACCCTGCTGTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i ponAbe2.chr19 I 724 C 0 s nomLeu3.chr10 102666894 247 - 106955855 gcacctgtcgtcgtggagcctgtgt---gcgggtggggttgataaa-GAAGGACC---AGGGTCTTCCGGGGGAGAATCATCGCTCAGTAATAAAGAGGGACTTTGTCGGGGCAAGTTTTTAGAGAACCCTGCTCTCCCTCCC---CAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCGAAGAGGCAGCAGAAGAGGAGGAAGGAGGAAGCTATGGGGAGGAAGAAGAGGAGCCAGCGATCGAGG i nomLeu3.chr10 C 0 M 1722 s rheMac3.chr19 59951547 248 + 64156825 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCAC-CAGTAATAAGGAGGGACTTTGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagCCAGCCATCGAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955489 248 + 59248254 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTGGTCAGGGCAAGTTTTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCCCTGGCAGACGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085459 248 + 51301725 gcaCCTGTCGTCGTGGAGCCTGCAC---GCTACTGGGGTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTTTTAGGGAaccctgctctccctccc-cacaggcCTCAGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793314 248 + 50890351 gcacctgtcgtcgtggagcctgcac---gctactggggTTCATAAA-GAAGGACC---AGGGTTTTCTGGGGGAGAATCATCGC-CAGTAATAAGGAGGGACTTTGTCGGGGCAAGTTGTTAGGGAACCCTGCTCTCCCTCCC-CACAGGCCTCGGGATGTCTCTGGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaagaggaggagccagccatcgagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366423 245 + 49145316 GCCGCTGTCAGTGTGGAGCCTGTGT---GCTGGTGGGATTGGGAAA-GAAGG-CC---AGGGCCTTCTGGGGGAGAAT--TTCCTCAGTGATAAGGAGGGACTT-GTTGGGGCAAGTGTTTAGGGAACCCTACTCTCCCTCTC-CACAGGCCTCGGGATGTCTCTAGCAGATGAGCTCTTAGCTGATCTCgaagaggcagcagaagaggaggaaggaggaagctatggggaggaggaagaggagccagcgatcgagg i calJac3.chr22 C 0 C 0 s mm10.chr7 3630421 244 + 145441459 ------------GTGGAGCCTGCGTGCGGCTACAGGAGCTGATGAA-GAAGAAACTTAAGGGGATCCGGGAGAAGGTGCTCCTTCTGGTGATATGAGTGGACAGGGTCAAGATGCAGTATTAGGGAACCCCATTCTCCCTTTCCCATAGGCCTTGGGATGTCTCTGGCTGATGAGCTCTTGGCTGACCTCGAGGAGGCAGCAGAAGAAGAGGAAGGAGGAAGCTATGGAGAAGAGGAGGAGGAGCCAGCAATTGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19589757 212 - 122678785 atacccgtgcttatggagcctgcat---gcttgtggggCTGACCCGTGAAGGACC---AGGCC------------AAGCCCCTCTCGTTAATGAG--------------------------AGGGGATGCTGCTTTCCCTTCC-CATAGGCCTCGGCATGTCTCTGGCAGATGAGCTTCTGGCCGACCTTgaggaggcggcagaggaggaagaaggaggaagctatggggaggaagaagaggagccagcaatcgagg i canFam3.chr1 C 0 C 0 a score=1265126.000000 s hg38.chr19_GL949753v2_alt 92871 429 + 796479 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGATAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCTTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCTT-CTCAGCCTTTTCCAGAGCCTTCTTTTTT-------TTTT--GTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA s panTro4.chr19 59026438 430 + 63644993 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCAGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGTGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGCGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTGTCCTCTCCTTTCCTA-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCCTCCCCATCTCCTGTCTCTCCTGCCGGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT--TCAGCCTTTACCAGAGCCTTCTTTTTT-------TTTTTTGTTTCACCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904280 430 + 60714840 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATTCCTAG-CAGGGGGCTTTAGACAGAATCTCCCAGAAGGGGGTGATACAGG--------CTTCTTTTTGAAGAGTGCTGGATTCTGACTCTCCTCTCCTTTTCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTGTGTACCCCTCCCCATCTCCTGTCTCTCCTGCCAGGCCCCCTGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGCCTTTTCTAGAGCCTTCTTTTTT-------TTGT-TGTTTCTCCCCAACCCGTTCCCTTTTCCACTAAATATATATTGCATTGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59951795 438 + 64156825 ATGTGCAGGAGGAGACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54955737 438 + 59248254 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCCCTCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTGTGCCCTTCCCTATCTGCTGTGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGCGGC---------TGGGT------GTATCTCCCC-CGCAGCCTTTTCCAGAGCCTTCTTTCTT-GTTTGTTTGTTTGTTTCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47085707 436 + 51301725 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAGCCAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACA-G--------CTTCTTTTGGAAGAGTCCTGGATTCtgactctcctctcctttcctg-caGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGGCTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-CTCAGCCTTTTCCagagccttctttttt--tttttttttttgtttctccccAACCCTTTCCCTTTTCCACTAAACATATACTGCATTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46793562 438 + 50890351 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCGTTCCTAG-CAGGGGGCTCTAGACAGAATCTCCCAGAAGGGGGTGACACAGG--------CTTCTTTTGGAAGAGTCCTGGATTCTGACTCTCCTCCCCTTTCCTG-CAGTTTGCTGAGATTATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCAGAAGGTGCTTCCTCCCACTCTCTGCCCTTCCCCATCTCCTATGTCTCCTGCCAGGCCCCTAGACTCCCTGGCTGCTTGTGGC---------TGGGT------ATATCTCCCC-TGCAGCCTTTTCCAGAGCCttctttttttttttttttttttgtttCTCCCCAACCCCTTCCCTTTTCCACTAAACATATACTGCATTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45366668 426 + 49145316 atgtgcaggaggagACACAGCTGGATCTTTCCGGGGATTCGGTCAAGACCATCGCCAAGCTATGGGACAGTAAGATGGTAAGAGGACAAGAGGCATGGATAG-CAGGGGGCTCTAAAC--AATCTCCCAGAAAGAGGCGATACAGG--------CTTCTTTTTGAAGAGTCCTGGATTCCGACTCTC--CTCCTTCCCTG-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGCTTCCGAAGGTACTTCCTCCCCCTTCGTGCCCCTCCCCATCTCCTGACTCTTCTGCCAGGCCCCTTGGCTCCTTTGCTGCTTGTGGC---------TGGGT------ATATCTCCCT-CTCAGAGTTTTCCAGAGCCTTCTCTTTT--------TTTTTATTCCTCCCCAACCCATTCCCTTTTCCAGTAAACATAAATTGCTTCGTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3630665 405 + 145441459 ATGTACAGGAGGAGACCCAGCTGGATCTTTCTGGAGATTCAGTCAAGAGCATTGCCAAGCTATGGGACAGCAAGATGGTGAGGTGGCA-----CCCTTTAAG-TCAGCGTTCCTAGGGAGGAGTGGCCGGAGAGCAG------------------TTCTTTCTG-AGAGGCCTAGTTTCTGACTGTGCTCTCCTTCCTCATCAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAACGTGTCGGAAGGTGCCTCCCACCCTCACTTTCCTCTGCCCAT---------------TCTGACTCCCCGACTCTCTTGCTCCTTATGGT---------TTTATCACCAAGTGTCTCCCTCCTCAGCTTTCCTCAGAGCATTCATTCTT-------CTTTTTTTTTTT---AAATCCAGTTACTGACCCTCTGAAAACATACTGCATTGTA i mm10.chr7 C 0 I 1141 s canFam3.chr1 19589969 417 - 122678785 atgtgcaggaggagACGCAGCTGGATCTTTCTGGGGATTCAGTCAAGAGTATCGCCAAGCTGTGGGACAGCAAGATGGT------------------------GAGTGGGCTGTAGAGAGAAGCTGCCGGGAGG-GCTGATGTGTGCAGTTGCTCTTCTTTCTG-AGAGTCCTGAGTTCTGTCTCTCTGTCCTCCCTGAA-CAGTTTGCTGAGATCATGATGAAGATTGAGGAGTATATCAGCAAGCAGGCCAAGGCCTCGGAAGGTACCTCTCCCCTCCTGCTCCCTCTCACCCACCCAGCTGTGTCCACCCAG-CCCCTGGGCTCCTTTGCTGCGTACAGCTTTGAAAGTTTGGT------CTGCCTGCCT-CTCAGCCTTTTTGAGAGCCCTCTTTTTC------------TTTTCCATCCCAACCCAGTCTCTTCTCCCCTGAGAACACATCACATCATA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102667141 1722 - 106955855 M a score=627517.000000 s hg38.chr19_GL949753v2_alt 93300 260 + 796479 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggtttttgccacatctataagccgcttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa s panTro4.chr19 59026868 257 + 63644993 AAGCTCATGCTTCTTAAGTCCTTCCTGTT-----TGCTGAGC--TTACTGATCATGATAGGACTCAGCTTGAGgtttcccagacttcactgattgacatgaccggttacagggtttttgccacatctgtaagccgcttatcctatt---tgcttaacatattctttgagtcta-ggactttttttcttaaattt-atctgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904710 260 + 60714840 AAGCTCATGCTTCTTAAGTCCTTCCTGTG-----TGCTGAGC--TTACTGATCATGATAGGACGCAGCTTGAGgtttcccagacttcactgattcacatgaccggttacagggttttcgccacatctataagccacttatcctattatttgcttaacatattctttgagtcta-ggactttttttcttaaattt-atccgagaaggaagcaaattgctaccatgaatggaaaactggtatcatttggcaaagacaaagtcactgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952233 256 + 64156825 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGTTGGGACTTAGCTTGAGGGttcccagacttcactgatgcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956175 256 + 59248254 AAGCTCATGCTTCTTACGTCCTTTCTGTG-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaagcaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086143 256 + 51301725 AAGCTCATGCTTCTTACGTCCTTTCTGTA-----TGCTGAGC-----CTGGTCATGCTGGGACTTAGCTTGAGGGTTCCCAGACTTCACTGATTCACATGACCGGTTACAGGGTTTTTGCCACATCTATAAGCCACTTGTCCTATTATTTGCTTAACATATTCTTTGAGTCTG-Ggactttttctcttaaattt-atcTAAGAAGGAAGCAAATTGCTACCATGAATGGAAAACTGGTATCATTT-GCAAAGACAAAGTCACcgtataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794000 261 + 50890351 AAGCTCATGCTTCTTACATCCTTCTTACGTCCCATGCTGAGC-----CTGGTCATACTGGGACTTAGCTTGAGGGttcccagacttcactgattcacatgaccagttacagggtttttgccacatctataagccacttgtcctattatttgcttaacatattctttgagtctg-ggactttttctcttaaattt-atctaagaaggaaggaaattgctaccatgaatggaaaactggtatcattt-gcaaagacaaagtcaccgtataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367094 257 + 49145316 CAGCGCAT-CTTCTTAAGTCCTCACTGTG-----TCCTGAGT--TTGCTAATCACGATGGGACTTAGCTTGAGTtttcccagactcc-cagattcacatgaccagttacagggttttggccacatctagaagccacttgtcct-ttaattgcttaacatattctttgagtcta-ggtcttttt-tcttaaatttgatctacaaaggaagcaaactgctgccatgaatgggaaactggcatcacttggtaaagacgaagtcaccatgtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590386 252 - 122678785 AAGCTGATGTTCCTTAAGTCCTTGCTCCG-----TGCTGAGCACTTACTAACTGCAGTAGGACTTGCCTCAAGATTCCTCCGGCTTC--------ATGTGACTGCTT--GAGGGtcttgccacatctgtgaa-cacttgttttgttttttacttaatttttttttcaaatcagtgtactcttttctttgaattt-acctaaaaaggaaagttattgctactgcgagtagaaaactggtatcacttggtaagtagagagtaattctaaaa i canFam3.chr1 C 0 I 87 e mm10.chr7 3631070 1141 + 145441459 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=35082.000000 s hg38.chr19_GL949753v2_alt 93560 19 + 796479 aaatagatataTAATTATT s panTro4.chr19 59027125 19 + 63644993 aaatagatataTAATTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904970 19 + 60714840 aaatagatataTAATTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952489 19 + 64156825 aaatagacataTAATTATT i rheMac3.chr19 C 0 I 8 s macFas5.chr19 54956431 19 + 59248254 aaatagatataTAATTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086399 13 + 51301725 aaatagatatatt------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794261 19 + 50890351 aaatagatataTAATTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367351 19 + 49145316 aaataaatacGTGATTATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=4103.000000 s hg38.chr19_GL949753v2_alt 93579 8 + 796479 TAGGAACC s panTro4.chr19 59027144 8 + 63644993 AAAGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904989 8 + 60714840 AAAGAACC i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46794280 8 + 50890351 AAAGAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367370 8 + 49145316 AGAGCATC i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=76938.000000 s hg38.chr19_GL949753v2_alt 93587 295 + 796479 ACCTAAggccgggcgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggtggatcatgagttcaggagatcgagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa s panTro4.chr19 59027152 295 + 63644993 ACCTAAggctgggcgcagtagctcacccctgtaatcccagcactttgggaggccgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgacaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcggg-----tgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55904997 300 + 60714840 ACCTAAggccgggtgcagtagctcaggcctgtaatcccagcactttgggaggctgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaagccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggtgccttgcctgtagtcccagctattcaggagggtgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagatcgtgccactgcactcctgcctgggagacagagcaagattccgtctcaaaaaaaa i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e papAnu2.chr19 47086412 0 + 51301725 C e macFas5.chr19 54956450 0 + 59248254 C e rheMac3.chr19 59952508 8 + 64156825 I a score=2554.000000 s hg38.chr19_GL949753v2_alt 93882 8 + 796479 aaaa----------aata s panTro4.chr19 59027447 8 + 63644993 aaaa----------aata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905297 18 + 60714840 aaaaaaaaaaaaagaaTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54956450 8 + 59248254 AAAG----------AATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086412 8 + 51301725 aaag----------AATC i papAnu2.chr19 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e calJac3.chr22 45367378 0 + 49145316 C e nomLeu3.chr10 102667141 1722 - 106955855 M e chlSab2.chr6 46794288 0 + 50890351 C e rheMac3.chr19 59952508 8 + 64156825 I a score=333780.000000 s hg38.chr19_GL949753v2_alt 93890 152 + 796479 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatagagtctccctctgtcgcccaggctggagt s panTro4.chr19 59027455 152 + 63644993 aCCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCACACTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905315 153 + 60714840 ACCTAAAACCTTTTCTCATGCCCAAATTGAGAGAACACTAGCTTATCTCATGAGTGCTCAGATTCACTCTTAAGAGGGCAGTCCTGTTACCATTCCTAttctattttttt------ttttccttgagatggagtctccctctgtcacccaggctggagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59952516 157 + 64156825 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttc--ttttttttttccattttccttgagacggagtctccctctgttgcccaggctggagt i rheMac3.chr19 I 8 C 0 s macFas5.chr19 54956458 158 + 59248254 ACCTAAAACCTTTTCTTACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086420 158 + 51301725 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCGTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACcattcctattct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794288 158 + 50890351 ACCTAAAACCTTTTCTCACTTCCAAATTGAGAGAATACTAGCTTATCTCCTGAGTGCTCAGACTCACTCTTAGGAGGGCAGTCCTGTTACCATTCCTAttct-ttttttttttccgttttccttgagacggagtctccctctgttgcccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367378 156 + 49145316 ATCTAAAAGCTTTTCTCACTTCCACATTTCGGGAACACTGGCTTATCTCTTGAGTAGTCAGACT--GTCTTA-GAGGGCAGTTCTGTTACCACTCCCAttctctctcttttttattttttcctttcgacagagtctcactctctcgcccaggctggagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I e nomLeu3.chr10 102667141 1722 - 106955855 M a score=734064.000000 s hg38.chr19_GL949753v2_alt 94042 248 + 796479 gcagtgatgtgttcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT s panTro4.chr19 59027607 248 + 63644993 gcagtgatgtgatcttggctcattgcaacctccacctcccgggttcaagcgattctcctccctcagccttatgtatagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagatagg--gttttaccatgttgaccaggctagtctcgaactcctgacttcaagtaatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905468 248 + 60714840 gcagtgatgtgatcttggctcattgcaacctctgcctcctgggttcaagcgattctcctccctcatccttatgtgtagctgggattacagttgtgcaacaccatgcctagctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102668863 247 - 106955855 gcagtgatatgatcttgg-tcattgcaacctctgcctcccgggttcaagcgattctcctccctcagcgttatgtgtagctgggattacaggtatgcaacaccatgcctggctattttgta--ttttttagtagagacggg--gtttcaccatgttgaccaggctagtctcgaactcctgacctcaagtaatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccactacgcccagccTT i nomLeu3.chr10 M 1722 C 0 s rheMac3.chr19 59952673 248 + 64156825 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956616 248 + 59248254 gcagtgatgtgatcttggctcactgcaacctctgcctcccgggttcaagtgagtctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctgctctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47086578 248 + 51301725 gcagtgatgtgatcttggctcactgcaacctctacctcccgggttcaagtgattctcctccctcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccagcctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794446 248 + 50890351 gcagtgatgtgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcctccttcagccacctgagtagctgagatgacaggtgtgcaccaccacgcctggctattttgta--ttttttagtagagacggg--gtttcatcatgttggctaggctggtcccgaactcctgacctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggccTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367534 252 + 49145316 gcagtggtatgatcttggctcattgcaacctccacctcccaggttcaagcgattctcctgcctccgcctcccgagtagctgggattacaggcatgcaacaccatgtctggctattttgtattttttttagtagagacggggtgtttcaccatgttggtcaggctggtcttgaacctctgacctcaagtgaccagcccacctcggcctcccaaagtgccaggattacaggcatgagccactgctcctggccTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19590638 87 - 122678785 I a score=1749891.000000 s hg38.chr19_GL949753v2_alt 94290 574 + 796479 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATAGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagg-aagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggcccggggcctcagatatccggagagaga---------------------------atcctgcagagttccagATGCCAGGCCAAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCGGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG s panTro4.chr19 59027855 561 + 63644993 CCCATTCTTCTT-----------------GAATGGAATTTGTTGATGACAGGAAGCCATGGGAGGTTTCTGGGGAAAGAAGTGTAGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACctg-ggtacccagttg--------------------------------aatcgcccaggtctttgctctcatagtactcaaggtctagtggaagaggcaggccaggttccagacagctatcagt-ggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccagatgtcagggaagaatcgatagctgaattggactatagagcatgaatgcatgtgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGCCTCAGATATCCAGAGAGA-----------------------------------------TCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCCAGTGTCTGGTTGAGGAGGCAGAGGTGAAACATCTCACAAGCT-GTGGCAGTCCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55905716 577 + 60714840 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACGACACAAAGTCATGGGAGGTTTCTGGGGAAAGAAGTGTCGTGAG-AGGGCAGAGTTTCGGG-AGACTCACTGCTTGCTTTCTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccagttctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctatcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaattggactgtagagcatgaatgcatgtgccaggtaaagaaagggagaagggggccca-----------------gggaaagatagctgcaggcctggggtctcagacatccagagagaga---------------------------atcctgcagagtTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTGGTGGCAGTCCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669110 573 - 106955855 CCCATTCTTCTT-----------------GACTGGAATTTGTAGACAACAGGAAGCCATGGGAGGTTTCTGGGCAAAGAAGTGTAGTGAG-AGGGCAGCGTTTCAGG-AGACTCACTGCTTG----CTT-----TAACGTTTACCTg-ggcacccagttg--------------------------------aatcgcccaggtctttgctctcaaagtgctcaaggtctagtggaagaggcaggccaggttccagacagctgtcggcgggtggtacc--------------aagctggggacaccggagccacaggagggactggctgaccctgccccaggtgtcagggaagaatcgatagctgaatgggactgtagagcatgaatccatgcgccaggcaaagaaagggagaagggggccca-----------------gggaaagacagcggcaggCCCGGGGTCTCAGACATCCGGAGAGAGA---------------------------ATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCCTCCAGAGGGTTATGGGACACAG--AAAGTGACATTTCCTGATGTTAGGCCAGGCTCAGGGATGGAGTCAGACCCCATCACACCCGGTGTCTGGTTGAGGAGGTAGACGTGAAACATCTCACAAGCTCGTGGCAGTCCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59952921 597 + 64156825 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTG-GGCACCCAGTTG--------------------------------AATTGCccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGCAAAAACACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54956864 593 + 59248254 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGGG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTACTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aattgcccgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccgggttccagacagctgtcggcgggtggtacc--------------aggctggggacgctggagtcacaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagcggC-GGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCACCAGATCCTGCAAAGTTCCAGAGGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAGGCAGGTGGCAGTCCCCG i macFas5.chr19 C 0 I 174 s papAnu2.chr19 47086826 591 + 51301725 cccaTTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAAGCCATGGGAGGTTTCTGGGGGAAGAAGTGTAGTGAG-AGGGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTCACCCA-GGCACCCAGTTG--------------------------------AATCGCCCGGGTCTTTGCGCTCAACATGCTCAAGGTCTAGTGGAAGAGGCAGGCCAGGTTCCAGACAGCTGTCGGCGGGTGGTACC--------------AGGCTGGGGACGCTGGAGTCACAGGAGGGACTGGCTGACCCTGCCCCAGGTGCCAGGGAAGAATCGATAGCTGAATTGGACTCTAGAGCGTGAATGCATGTGCCAGgcaaagaaagggagaa---ggcCC-----------------------AGACAGCGGCAGGCCCGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCAGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCTGTCATACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCAGTCCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46794694 594 + 50890351 CCCATTCTTCTT-----------------GAATGGAATTTGTTGACAACAGGAATCCATGGGAGGTTTTTGGGGGAAGAAGTGTAGTGAG-AGTGCAGAGTTTTGGG-AGACTCACTGCTTGCTTGCTT-----TAAGGTTTACCTg-ggcacccagttg--------------------------------aatcgcctgggtctttgcgctcaacgtgctcaaggtctagtggaagaggcaggccaggttccagacagctattggcgggtggtacc--------------aggctggggacactggagcctcaggagggactggctgaccctgccccaggtgccagggaagaatcgatagctgaattggactctagagcgtgaatgcatgtgccaggcaaagaaagggagaagggggccc-----------------------agacagtggCAGGCCTGGGGCCTCAGGCATCTGGAGAGAGAGGGCAGGCTCTGGAGC----GCGCCAGATCCTGCAGAGTTCCAGATGCCAGGCCGAGGAATTTCTCCATCCGGAGAGTTATGGGACACAG--AAAGTGACATTTCCTGATGTCAGGCCAGGCTCAGGGATGGAGTCAGACCCCGTCACACCTGGTGTCTGGTGGGGGAGGAAGACGTGAAACACCTCACAAGCAGGTGGCTATCCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45367786 614 + 49145316 CCCATTCATCTT-----------------GAATGAAATTTCCTGACAACAGGAAGCCATGGGAGGTTGCTGGGCAAAGACGTGT-GTGAG-AAAGCCGAGTTTCAGG-AGACCCACTGCCTGCTGTCTT-----TAATGTTTACctg-ggcacccagtgg--------------------------------aaacccccaggtctgtgctct-aatgtgctcaaggtctggtggaagaggcaggccaagttccagacagctgtcagtgggtgatacc--------------aagctggggccactggagccacaggagggactggctgaccctgccccaggggtcagggaagaattgatggctgaactggactctagagcatgaatgcatacgccaggggaagaaagggaggaaggggcctgggaaagaaaaGGGGGCCGGGAAAGAAAGCGGCACGCCCAGGGCCTCAGATACTAGGAGTGAGAGGGCGGGCTCAGGAAT----GTGCCAGATCCTGCAGGGTTCCAGATGCCAGGCCGGGGAACTTCTCCATCCAGAGAGTTATGGGACACAG--AAGGTGACATTTCCTGATGTCAGGCCAGGAGCAGGGAT-GAGTCAGATCCCGTCATACACGGTGTCTGGTTGGAGAGGTAGTCATGAAACATCTCACAAGCAGGTGGCAGTTCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19590725 634 - 122678785 CCCATTCTTCTTAACAGTTTGGAGTTCCGGAATGGAATTCATTGGCAG-AGGCAGCCATGGGAGGTTG-TCAGTGCAGCAGTGGTGTGGGCAGAGCAGAGTTGCAGGCAGACCTACTCTTTCCTTCCTTCCTTGTAAAGTTTTCATGAGGTGCCCTGTGGCAAGCCCGCATGGGCACTGGGTGCACTGGGGAACCCACCCAACTCTCTGCTCTCAGGATACTCGGTGTCTGGCAAAGCGGATAGGTCAGG-TCTGGGCAGTGGTT-GTGGGCGGTGCCTGCTGGGGTGGGGAGAGCTGGGGGCATTGGAGCCACCAGAGCGG--GGCTGACCCTGCCTCAGG--------------CCATACCTGAAATTGGCTTTGAAGCATGAATACACATACCAGGCCAAGAACAGCAGCTATATGCCCT-----------------GAGAAAGAGAACTGTGTGTGCAAAGCCTCACATGTCTGGAGTGGCAGAGGCAGCAGGAGAAA----GTGCCAGATCCTGCAGGATTTTGAGCACCAGG-----------------CCAGCGAGCTGTGGGGAGCGGTAGAAGGGACACTCCCTGATGTCGGGTCAGGCTCGGAGTTAG-GTCAGACCTGATCTCACCTGGTgtttggtggaggaggtgaacacagaacacctccaacctgggtggcggttatg- i canFam3.chr1 I 87 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=109212.000000 s hg38.chr19_GL949753v2_alt 94864 34 + 796479 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA s panTro4.chr19 59028416 34 + 63644993 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906293 34 + 60714840 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669683 34 - 106955855 TTTATTGGAGAT-GCACAAGTGCTGCGGGTACACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953518 34 + 64156825 TTTACTGGAGGT-GCACGAGTGCTGCGGGCACACA i rheMac3.chr19 C 0 I 232 s macFas5.chr19 54957631 34 + 59248254 TTTACTGGAGGT-GCACAAGTGCTGCGGGCACACG i macFas5.chr19 I 174 C 0 s papAnu2.chr19 47087417 34 + 51301725 TTTACTGGAGGT-GCACAAGTGCTGCGGGTACACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795288 34 + 50890351 TTTACTGGAGGT-GTGCAAGTGCTGCGGGTACACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368400 32 + 49145316 TTTATTGGAG---GCACAAGTGCTGCAGGTACCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591359 35 - 122678785 tctaacggatgtggcaggagttccgcaggagcaca i canFam3.chr1 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=522952.000000 s hg38.chr19_GL949753v2_alt 94898 169 + 796479 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggagtgcagactctgacgccgccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc s panTro4.chr19 59028450 169 + 63644993 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggtgtcagatctgagctctgccttctactgg--ctgtgacatcaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906327 169 + 60714840 GAGGAGGCGTCTGATCCTTCCAGAATGGGAGGGAAGGATTCTGGGTCGCTGCCTGAGTCTTAAGGGCTTAAAGAGCCGTTTGagc-atcagggttaggaacccagactctgaagccgccctgcctggggtcaggtctgagctctgccttctactgg--ctgtgGCATGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669717 168 - 106955855 GAAGAGGCGTCTGATCCTTCTGGAAAGGGAGGGAAGGATTCTGAGTCGCTGCCTGAGTCTTAAGGACTTAAAGAG-CATTTGagc-atcagggttaggaacacagactctgaagccaccctgcctggggtcagatctgagctctgccttctactgg--ctgtgacatcaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953784 167 + 64156825 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtaaggtctgagctctgctgtctactgg--cggtgacatcagac i rheMac3.chr19 I 232 C 0 s macFas5.chr19 54957665 167 + 59248254 GAGGAGGCGTCTGATCCTCCCAGACAGGGAGGGAAGGATTCTGAGTCACTGCTGGAGTCTTAAGGACTTAAAGAGCCTTTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--cggtgacatcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087451 167 + 51301725 GAGGAGGCATCTGATCCTCccagaaagggagggaaggattCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCTTTTGAGC-ATCAGGGTTAGGAACAC--ATTCTGAAGCCACCCTGCTTGGGGTCAGGTCTGAGCTCTGCTGTCTACTGG--CTGTGACATCAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795322 167 + 50890351 GAGGAGGCGTCTGATCCTTCCAGAAAGGGAGGGAAGGATTCTGAGTCACTGCCGGAGTCTTAAGGACTTAAAGAGCCATTTGagc-atcagggttaggaacac--attctgaagccaccctgcttggggtcaggtctgagctctgctgtctactgg--ctgtgACATCAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368432 155 + 49145316 GAGAAGGCATCTGATCCTTCCGGAAAGGGAGGGAACGGTTCTGAGTCGCTGCCTGAGTCTTAAGCACCACAAGAGCCATTTGagc-atcagggttaggagcacagactctgcagccaccctgcctggggtcagatttgagctct----------------gtgacATCAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591394 154 - 122678785 gaggagacatctgaccctcctgaagggggagggaaggatcctgaggtgctgtctgagTCTCAAGA---TGCAGAAACATTTGAGTGATCAGggttaagaatgcaggtgc---------------tggggctagatctcaggtctgccatctgctgggtccatggctttaggc i canFam3.chr1 C 0 I 259 e mm10.chr7 3631070 1141 + 145441459 I a score=456153.000000 s hg38.chr19_GL949753v2_alt 95067 159 + 796479 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tgtgggctcaggcgttcctgcctcagcctccca s panTro4.chr19 59028619 156 + 63644993 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct----------gggctcaggcgttcctgcctcagcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906496 159 + 60714840 AGTTAGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcgttcctgcctcagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102669885 159 - 106955855 agttaGTATTTGCATGACTTTTAAACACAACAtc-tttttgtttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcccagctcactgcagccttgacct-------tctgggctcaggcattcctgcctcagcctccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59953951 155 + 64156825 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcgcagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i rheMac3.chr19 C 0 M 136 s macFas5.chr19 54957832 155 + 59248254 agttaGTATTTGTATGACATTTAAACACAACAtc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccagaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcctgcctcagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087618 155 + 51301725 AGTTAGTATTTGTATGACATTTAAACAcaacatc-----tttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccatgacct-------tctgggctcaggtgttcctgcctcagcctccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795489 156 + 50890351 ----AGTATTTGTATGACATTTAAACACAACAtcttttttttttgtttgttttttgagacagggtctcactctgtcacccaggccggaatgcagtggcacgatcacagctcactgcagccttgacct-------tctgggctcaggtgttcccgcctcagcctccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368587 159 + 49145316 AGTGAG----TGTATGACATTTAAACACAGCATC---ACtttttgtttgttttttgagacagggtctcactctgaca-ctaggtgagaatgcagtggcatgaacgcagctcactgcagccctgaccttctgggttctgggttccggcgttcctgcctcagcctccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=327248.000000 s hg38.chr19_GL949753v2_alt 95226 145 + 796479 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt s panTro4.chr19 59028775 145 + 63644993 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906655 144 + 60714840 ggcagctgggaccacaggtgtacacc-ccatgcctggctaatt-ttttttctttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670044 140 - 106955855 ggcagctgggaccacaggtgtacaccaccatgcctggctaatt-tt-----tttaattatgtgtagagatggggtctccctatgtcgcccaggttgctctccaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54957987 146 + 59248254 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087773 146 + 51301725 ggcagttaggaccacaggcatacaccaccatgcctggctaatttttttttctttaattatttttagagatggggtctctctatgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795645 146 + 50890351 ggcagttaggaccacaggcatacaccaccatgcctggctaattattttttctttaattatttgtagagatggggtctccctgtgttgcccaggttgctcttgaactcctgggctcaagcagttctcctgcctcagcctcccaaagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368746 143 + 49145316 gatagctaggaccacaggcatacaccaccatgcctggctcatt-ttttttctttaattatctgtagagatgggatc-ccctgtgtcgcccagtttgctctgaaac-actgggctcaagcagttctccagcctgcgcctcccaaagt i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e rheMac3.chr19 59954106 136 + 64156825 M a score=95902.000000 s hg38.chr19_GL949753v2_alt 95371 30 + 796479 gctgggattacaggtatgagccactgtgcc s panTro4.chr19 59028920 30 + 63644993 gctgggattacacttatgagccactgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906799 30 + 60714840 gctgggattacaggtatgagccactgtgcc i ponAbe2.chr19 C 0 I 118 s nomLeu3.chr10 102670184 30 - 106955855 gctgggattacaggtatgagccactgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954243 30 + 64156825 gctaggattacaggcgtgagccactgtgcc i rheMac3.chr19 M 136 C 0 s macFas5.chr19 54958133 30 + 59248254 gctgggattacaggtgtgagccactgtgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087919 30 + 51301725 gctgggattacaggtgtgagccactgtgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795791 30 + 50890351 gctgggattacaggtgtgagccactgtgcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368889 30 + 49145316 gctgggattacaggtgtgagccactgtgcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=34557.000000 s hg38.chr19_GL949753v2_alt 95401 16 + 796479 -tgaccTCTTATTActa s panTro4.chr19 59028950 16 + 63644993 -tgaccTCTTATTActa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102670214 16 - 106955855 -tggccTCTTATTActa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954273 16 + 64156825 -tggccTCTTATTActa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958163 16 + 59248254 -tggccTCTTATTActa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087949 16 + 51301725 -tggcctcttattACTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795821 16 + 50890351 -tggccTCTTATTACta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368919 17 + 49145316 tggccCCCTTATAACCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I e ponAbe2.chr19 55906829 118 + 60714840 I a score=1010476.000000 s hg38.chr19_GL949753v2_alt 95417 391 + 796479 aagcacaaagaagcgttttccagaaacagacgtggggtaagggatgctctggggagagggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaacaaacaaaaaaaattagccgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa-aa s panTro4.chr19 59028966 388 + 63644993 aagcacaaagaagcgttttccagaaacagacgtggggtaagggacgctctggggagaaggagcagcacatgcagaggccaggaggggtctggcgcggtggctcacgcctgtcatcccagcactttgggtggtcaaggcagatggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaaaa-aaaaaaaattagctgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcatgccactatactctagcctgggcaaccagagcgaaattatgtctcaaaaaaaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55906947 378 + 60714840 AAGCACAAagtagcgtttcccagacacagaca-ggggt-agggacgctct-gggagagggaacaccacatgcaaagccca-gaggggtcgggcgt-gtagcttacgcctgtcatcccagcactttgggtggtcaaggcaggtggatcacctgaggttgggagttcgagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaa------aaaaaaaattagttgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactatactctagcctgggcaacaagagcgaaattatgtctcaaaaaaaaaa--- i ponAbe2.chr19 I 118 C 0 s nomLeu3.chr10 102670230 390 - 106955855 aagcacaaagaagcgttttccagaaacagacatggggtaagggacgctctggggagagggaacagcacatgcaaaggccaggaggggtctggcatggtggctcacgcctgtcatcccagcattttgggtggtcaaggcaggtggatcacctgaggtcgggagttcgagaccagcctgcccaacatggtgaaaccctgtctgtactaaaaatataaaaaa--aaaaaaaattagctgggcgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcatgccactatactctagcctgagcaacaagagcgaaattatgtctctaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954289 378 + 64156825 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaagtccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagtctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttcgcggggcgtggtggcgggcgcctgtaatcccaactacttggggggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgatactccatctc-aaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958179 379 + 59248254 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaagaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggccaaggctggtggatcacctgaggtcgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcagggcatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47087965 379 + 51301725 AAGCACAAAGAAGGGTTTTCCAGAAATAGACATGGGGTAAGGGACGCTCTGGGGagagggaacagcatatgcaaaggccaGGACGGGCcttgcatggtggctcatgcctgtcgtcccagcac--tGGGTggtcaaggctggtggatcacctgaggttgggagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcggggcatggtggcgggtgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgacactccatctcaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46795837 379 + 50890351 aagcacaaagaagggttttccagaaacagacatggggtaagggatgctctggggagagggaacagcatatgcaaaggccaggaggggccttgcatggtggctcatgcctgtcgtcccagcac--tgggtggtcaaggctggtggatcacctgaggtcgagagttcgagatcagcctgcccaacatggtgaaaccccatctctactaaaaatac--------aaaacaagttagcgggggatggtggcgggcgcctgtaatcccaactacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccactacactctagcctgggcaacaagagtgaaactccatctcaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45368936 353 + 49145316 AAGCACAA---AGGGTTTTCtggaaacagacgtg-----------------gggagacggaacagcatatgcagaggccaggaggggccagatgcagtgggtcacccctgtaaccccaccactgtggggggcccaggcgggcggatcacctgaggttgggagttcgagaccaacctggccaacatggtgaaaccccatctctactaaaaataccc------ccaaaaatttagctgggcatggtggcacatgcctgtaattccacctactgaggaggcccaggc---agaattgcttgaacctgggaggcggaagttgcagtgagccgagatggtgct------ctgtagcctgggcaacaagagcgaaactccg-agaaaaaaaaaaa--- i calJac3.chr22 C 0 C 0 e mm10.chr7 3631070 1141 + 145441459 I e canFam3.chr1 19591548 259 - 122678785 I a score=157140.000000 s hg38.chr19_GL949753v2_alt 95808 52 + 796479 aaaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct s panTro4.chr19 59029354 50 + 63644993 ---ggctaggaggagtgggtgt-----------ctgtgatcactgtgatcactcctttatggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907325 51 + 60714840 -aaggctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatggct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670620 52 - 106955855 aaagcctaggaggagtgggtgt-----------ctgggg-cactgtgatcactcctttatagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954667 49 + 64156825 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958558 49 + 59248254 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088344 49 + 51301725 ---ggccaggaggAGTGGGTAT-----------CTGGGG-CACTGTGACCAGTCCTTTATGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796216 49 + 50890351 ---ggccaggaggagtgggtgt-----------ctgggg-cactgtgaccagtcctttatggct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369289 49 + 49145316 ---ggccaggaggagtgggtgt-----------ccaggg-cactgcaatcagtcctttgtggct i calJac3.chr22 C 0 C 0 s canFam3.chr1 19591807 63 - 122678785 agaggcccagaggagaggaagcagccctgagtgctcggg-cactgcagtcagtccttcctggct i canFam3.chr1 I 259 C 0 e mm10.chr7 3631070 1141 + 145441459 I a score=5351595.000000 s hg38.chr19_GL949753v2_alt 95860 1748 + 796479 ggagtggaataaaatga-ggtgt---------ggtgagaggatggggcgggaagggcg-ggaggccag-actgCAGAGCTGCTGAGtcagcaaacaggaacgggggaactccctgtgtgccaggtgctgtcctgggtactc---ggctgtgggtacagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCCTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-AGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACTTCATCCTCCGCCTCCTCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCCGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTGACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-ctcggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaaggacggctgagaa----aggctgtatgct-ggtgcccgtgtgccaggccacaagccagggcttcagttactaaaggaagaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGCGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCAACCCC-------------------------AGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTTGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACACGGAGATTTGGGGCAGAGAGACGTC-TAAGTGCAGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCATGTCCAGGAAAGGATTAGGATG s panTro4.chr19 59029404 1713 + 63644993 ggagtggaataaaatgg-ggtgt---------ggtgagaggatggggcgggaagggca-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtacagccaacgcaggcacagcactggtccctgcagagcttctggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTCG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CTGTAGGAGGTTTCA----CACGGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAACCTCATCCTCCGCCTCCTTCAGCTGCGGGACCCGAGAGGGGGTAGGGAGTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCACCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAATGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCTGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTCACAGagtggctgaaataagaaggaagtgcgttct---ctcg--------------------------------------------cgtatgagtctgag-gagca-cttggggatggtgtggccgcttggctgcctgtagggccccggctctttccatcctgttggtcggccacctgcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--tc-ttttctttaagaaca-------------------tg------------------tcactg-----cagctcacgttttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaa----agcctttatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaggaag--gggacatgggtgttagggccaaccagcagagtctatcTTCCATCTCACCCGACAACCTCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GTGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTCGGACCCCCTCCCAGAGGCCTCAG-------------------GGTCTGGAGACGATGGAGAGGCGTGGATGAGGGCTCAGTGGT-CTGCTCTGCCCAGCGTGGGGGGGACGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC----------------------------------------------CGCTG-----GCCTGA----------------------------CCCACGCTGCTCCCGCTGTGGTCGGAGCCGGTGGCATT-GG--------------GGTTGACACAGGG-CAGGCACACGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------AGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCAGGTGTGCGTGAGGGCTGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55907376 1844 + 60714840 ggagtggaataaaatgg-gatgt---------ggtgagaggatggggtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacacaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACAGTCAGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGTCGTCAGCCTGTCGCCTGGTTTACTCT-----------------------------------------TCAGCCCCTCCGTCCTGACCCCTCCCAGCCTCATCCTCCGCC-----------------------------------------CCCTCCAGCTGCGGGACCCAGGAGGCAGACATCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCGTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTCTGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--CTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GCGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCT------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCG------CAA-----GCTCAGATCAAGGTTCACCTGCTGTCACAGAGTGGTTGAAATAAGAAGGAAGTGCGTTCT---CTCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCCGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTTGGCCACCTGcctcacggtgcaaggtgactgccccacctccagccatcacctttgcattcccaccagca----------------aggcgct--tc-t----tttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctaagaaatggaggctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaaggaagaag--gggacattggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCAGGCGGGGCTCA---------------------CTCTTGGACCCCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGGTGAGGGCTTAGTGGC-CCAGTCTGCCCAGCGTGGGAGGGACAGAGCCTGGACAGGACGT----------TCTCAGGGCTCCCCTCCTAACCC-------------------------GGTCTCCCGAGAGGGCGTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTCGGAGCGGGTAG-ATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGACGTC-TAAGTGCGGAGAGCTGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGATGG-GGAAGAGGTTGGATC--------ACGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCATGCGTGTCTAGGAAAGGATTAGGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102670672 1748 - 106955855 acagtggaataaaatgg-gatgt---------ggtaaggggatggagtgggaagggcg-ggaggccag-actgCAGAGTTGCTGAGtcagcagataggaactgggcaactccctgtgtgccaggtgctgtcctgggtactc---gggtgtgggtatagccaacgcaggcacagcactggtccctgcagagcttccggagttggggaggcCTTGAATGTCAGTCTGAGGA-CTTG---------GTCATTAGCCTTGGGGCTGTGGGGAG-CCGTAGGAGGTTTCA----CACGGTCGGTTCTGGGGT-GGATGGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGAAG----GCAGGAACACAAGTTCAGG-GATGTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCCTCCCAGCCTCATCCTCCATCTCCCCCAGCTGCGGGACCCGAGAGGGGGTAGGGATTTAGATACTCA--CACCCATGC--TTCCGTGTCCTCACAGTGATGGGACCAGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCTGGGGGGCAG--GTGGAGACAGCCCCGTGTGACGTCCCTCACGCCCCCTCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTAAGCC------CAA-----GCTCAGATCGAGGTTCCCCTGCTGTCACAGAGTGGCTGAAATAAGAAGGAAGTGTGTTCT---CCCG--------------------------------------------CGCATGAGTCTGAG-GAGCA-CTCGGGGATGGTGTGGCTGCTTGGCTGCCTGTAGGGCCCCGGCTCTTTCCATCCCGTTGGTCGGCCACTTGcctcacggtgcgaggtgactgccccacctccagccatcacctccgcattcccaccagca----------------aggcgct--cc-ttttctttaagaaca-------------------tg------------------tcactg-----ccgctcacagtttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccaggctacaagccagggcttcagttactaaa----gaag--gggacatgggtgttagggccaaccagcagagtctaccTTCCATCTCACCCGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCGCTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GCGGGGTG-----------------------------CTTCCG-------CTGGTGTGAAGGGGCTGGCGGGGCTCA---------------------CTCTCGGACCGCCTCCCAGAGGCCTCGG-------------------GGTCTGGAGACGATGGAGAGGAGTGGACGAGGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGATGGAGCCTGGACAGGACTT----------TCTCAGGGCTCCCCTCCTACCCC-------------------------CGTCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCATGCTGCTCCCACTGTGGTTGGAGCCCGTGGCATT-GGAGTTGACATCCGAAGGTTGACACAGGG-CAGGCACGTGGAGATTTGGGGGAGAGAGACATC-Taagtgcgaagagctgaa---------------------------------ga-gggaac-------------------------------------------------aagc---------------gaggaggaagTGAGGCGGGGAAGGAGGGGACGG-GGAAGAGGTCGGATC--------ATGTCCAG-CCTTTGGGTCTTAGGAGAAAGCCAAGGAAGGGTTTCGG---------AAGAGA--GGGGCGGGTGCGCGTGAGGGCGGGGA----GAGGAGGAGGTCCCCACGCGTGTCCAGGAAAGGATTAGGATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59954716 1879 + 64156825 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcccgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGAA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCTTCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCC----------------------------------------------------------------------------------TCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGTGTTCTCC-CTCACGTATGAGTCTGAGCGAGCACTCGGGGACGGCGTGGCTCCCTCGCGTATGAGTCTGAGCGAGCA-CTCGGGGACGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATCTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCCTCTGCATTCCCACCAGCA----------------AGGCACT--TC-TTTTTTTTAAGAaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGGGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGTCACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCGGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54958607 1835 + 59248254 gga-------------------------------tgagaggatggggtgggaagggtg-ggaggccag-accgcagagttgctgagtcagcagagaggaactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtgtgggtgtagataacgcaggcacagcactggtccctgcagagctTCTGGAGTTGGGCAggccttgaatgtcagtctaggga-cttg---------gtcattagccttggggctatggggag-ccataggaggtttcagacagaCGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtaagtaagaaggaagtgcgttctcc-ctca--------------------------------------------cgtatgagtctgagcgagca-ctcggggacggcgtggccgcttggctgcctgtaaggccccagccctttccatcttgttggtcggccacctgcctcgtggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgaaaaatggagcctgtatgct-ggtgcccgtatgccaggctacaagccagggcttcagttactaaaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCCGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGCGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGGTGAAGGAGAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGAGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGGCTCCCCTCGTACCCC-------------------------AATCTCCCGAGAGGGCTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCTCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTCGACACAGGG-CAGGCACGCGGAGATTTGGGGGAGAGAGATGTGTTAAGTATGGAGAGCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGC-GGAAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTTATGAGAAAGCCAGGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCAGGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAGAGGATCAGGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47088393 1917 + 51301725 GGA-------------------------------TGAGAGGATGGGGTGGGAAGGGTG-GGAGGCCAG-ACCGCAGAGTTGCTGAGTCAGCAGAGAGGAACTTGGCAGCTccctgtgtgccaggtgctgtccTGAGTACTC---GGGTGTGGGTATAGATAACGCAGGCACAGCACTGGTCCCTGCAGAGCTTCTGGAGTTGGGCAGGCCTTGAATgtcagtctaggga-cttg---------gtcaTTAGCCTTGGGGCTATGGGGAG-CCATAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGGTAGGGTCAAGTCTAGActggtgtggag-----------ggagagggatTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTCGCCTGCTTTACTCT----------------------------------------------------------------------------------TCAACCCCTCCTTCCTGACCCCCTCCAGCCTCGTCCTCCGCCTCCTCCAGCTGCAGGATCTGGGAGGCAGACGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCCGTCTCCCCCAGCTGTGGGACCCGAGACGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGTGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTAAGTGAGTGCT-GGGGGGAG--GCGGAGACTGCCCTCTGTGACGCCCCTCatgcccc--ctccc------------------------------------ttcccca---------------------cggGCCTTTCCCAGGGTCCTGCCGCTGAGCC------CAA-----GCTCAGATGGAGGTTCACCTGCTGTAACGGAGTGGTGTAAGTAAGAAGGAAGTGCGTTCTCC-CTCG--------------------------------------------CGTATGAGTCTGAGCGAGCA-CTCGGGGATGGCGTGGCCGCTTGGCTGCCTGTAAGGCCCCAGCCCTTTCCATTTTGTTGGTCGGCCACCTGCCTCGTGGTGCGAGGGGACTGCCCCACGTCCAGCCGTCGCctctgcattcccaccagca----------------aggcact--tctttttttttaagaaca-------------------tg------------------tCACTG-----CAGCTCACATTTTACAGAC-----CAGAACTAATTCCCCTGGTCACACCTAGCGGTAAGGGCGGCTGAGAAATGGAGCCTGTATGCT-GGTGCCCGTATGCCAGGCTACAAGCCAGGGCTTCAGTTACTAAAGGAAGAAG--GGGACGTGGGTGTTAGGGCCAACCAGCAGAGTCTGCCTCCCGTCTCACCTGACGCCCGCC------GTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGGAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGAGAGGAGCGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGCGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCGGGGCTCCCCTCCTACCCC-------------------------AGTCTCCCGAGAGGGCTTCTCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCGCTGTGGTCGGAGCCGGTGGCATT-GGAGTTGACATCCGAAGGTTGGCACAGGG-CAGGCACGCGGAGATTTGGGGGAGACAGATGTCTTAAGTATGGAGAGCCTGAGGGAGCAAGCGGGGAGGAAGCGAGGCGGGGAAGGA-GGGCACGCGGGAGAGGTCGGATCACACTGAGCCTTTGGGTCTCATGAGAAAGCCAAAGC---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGCACGC-GGGAGAGGTCGGATC--------ACACTGAG-CCTTTGGGTCTCATGAGAAAGCAAAGGAAGGGTTTCGG---------AAAAGA--GGGGCGGATGCACgtgagggcaggga----gaggaggcgGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46796265 1832 + 50890351 gga-------------------------------tgagaggatggggtgggaagggcg-ggaggccag-accgcagagTTGCTGAGTCGGCAGAGAGGAactgggcagctccctgtgtgccaggtgctgtcctgagtactc---gggtact----cagataacgcaggcgcagcactggtccctgcAGAGCTTCTGGAGTTGGGCAGGCCTTGAATGTCAGTCTAGGGA-CTTG---------GTCATTAGCCTTGGGGCTATGGGGAG-CTGTAGGAGGTTTCAGACGGACGGTCAGTTCCAGGGC-AGATAGGGTCAAGTCTAGACTGGTGTGGAG-----------GGAGAGGGATTGGAG----GCAGGAACACAAGTTCAGG-GATGTCTGCAGATGTCAGCCTGTTGCCTGCTTTACTCT-----------------------------------------TCAACCcctccttcctgaccccctccagcctcgtcctccgcc-----------------------------------------tcctccAGCTGTAGGATCTGGGAGGCAGATGTCAGCCTGT-CCCTGGTTTACTCTTCAG-CCCCTCCTTCCTGA-CCCTTCCCAGCCTCATCCTCTGTCTCCCCCAGCTGTGGGACCTGAGAAGGGGTAGGGATTTAGATCCTCA--CACCCATGCCACTCCGTGTCCTCACAGTGATGGGACCGGTGGAGGCAGCGCCTGAATACCGCGTCATCGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGCAG--GCGGAGACAGCCCCCTGTGACGCCCCTCATGCCCC--CTCCC------------------------------------TTCCCCA---------------------CGGGCCTTTCCCAGGGTCCTGCCACTGAGCC------CAA-----GCTCAGATCGAGGTTCACCTGCTGTAACGGagtggtgtgagtaagaaggaagtgtgttcttc-ctcg--------------------------------------------cgtatgagtctaagcgagca-ctcggggatggtgtggctgcttggctgcctgtaaggccccagctctttccatcttgttggtcagccacctgcctcacggtgcgaggggactgccccacgtccagccgtcgcctctgcattcccaccagca----------------aggcact--tc-ttttttttaagaaca-------------------tg------------------tcactg-----cagctcacattttacagac-----cagaactaattcccctggtcacacctagcggtaagggcggctgagaaatggagcctgtatgct-ggtgcccgtgtgccgggctacaagccagggcttcagttactagaggaagaag--gggacgtgggtgttagggccaaccagcagagtctgccTCCTGTCTCACCTGACACCCGCC-----TGTCCCGTTTACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGAGCAGAGAAG----------------GAGGGGTG-----------------------------CTTCTG-------CTGGTGTGAAGGTGCAGGCAGGGCTCA---------------------CTCTCGGACCCGCCCCCAGAGGCCTCGG-------------------GGTCTGGAGATGAAGGATAGGAGTGGACGGAGGCTCAGTGGC-CTGCTCTGCCCAGAGTGGGAGGGACGGAGCCTGGATGGGACTT----------TCTCAGGCCTCCCCTCGTACCCT-------------------------AGTCTCCTGAGAGGGTTTCCCCGCTG-----GCCTGA----------------------------CCCGCGCTGCTTCCCCTGTGGTCGGAGCCAATGGCATTGGGAGTTGACATCCGAAGGTTGACACAGGA-CAGGCACGTGGAGATTTGGGGGAGAGAGATGTCTTAAGTATGGAGAGTCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGT---------------GGGGAGGAAGTGAGGCGGGGAAGGAGGGGACGT-GGAAGAGGTGGGATC--------ACTCTGAG-CCTTTGGGTCTTATGAGAAAGCCAAGGAAGGGTTTTGG---------AAAAGA--GGGGCGGATACACGTGAGGGCAGGGA----GAGGAGGCGGTCCCCACGTGTGTCCGGGAAAGGATTAGGATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45369338 1679 + 49145316 ggagtggaatacaatgg-ggtat---------gatgagagggaggggtgggaagtgta--gaagctag-accgCAGAGTTGCTGAGtcagcagacaggaactggacagctccctgtatgccaggtgctcttctgggtactc---gggtgtgggtgtagaccatgcaggcacagcactggtccctgcagaacttccggtgttggggacaccatgactatcagtctgggaagcttggtcatgagtgtcatgagccttagggctgtgggaag-ccataggaggttcaa-------------ttccagggt-aga-ggggtcaagtctagactggtctggag-----------ggagagagatgggag----GCAGGGACACAAGATCAGG-GAC-TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACATCAGCCTGTCCCCCGGTTTACTCTTCAGCCCCCCCCTTCCTGACCCCCTCGAAACCTTGTCCTCCATCTCCCCCAGCTTTGGGACCCAGGATAGGGTAGGGATTTAGATCCTCA--CACT----CCGCTCTGTGTCCTCACAGTGATGGGGCCAGTGGAGGCAGCCCCTGAATACCGCGTCATTGTGGATGCCAACAACCTGACCGTGGAGATCGAAAACGAGCTGAGTGAGTGCT-GGGGGGAG--GCGGACGCAGCTCCGTGTGACA-CCCTCATGCCCA-TCTCCC------------------------------------TTCCCCA---------------------CTGGCCTTTCCCAGGGTCCTGCCCCTGAGCC------CAT-----GCTCAAATCCAGGTCCACCTGCTGtaac--agtggtttgaagaagaaggaagtttgttctcctctta--------------------------------------------tgtgtgagtctgagcgagca-cttgggggtggtgt--------------------ggccccagctctttccatcttgttgttcagccac-tggttcacggtgcaaggtggctgtcccacctccagccatcacctctgcatttccaccagca----------------agGCGCT--TC-TTATTCTTAAGAACG-------------------TG------------------TCACCACAGCTCAGCTCACATCTTACAGAG-----CAGAACAAATTCCCGTGGTCATAC-------------------------------------------------------------------------------GTAAAGGAAGAAG--GGGAAATGGGTGTTAGGG-CAACCAGCAGACTCTACCTCCTGTCTTACCCAAGA-CCGCC-----TGTCCTGTCCACCCTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCGAAGAGATTCCCTGAACTGGAGTCCTTGGTCCCCAATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCCAAGAAG----------------GCGGGGTGCTTGGGAAGAACTGTGGCTTCTTGCCCGACTTCTG-------CCGGTGTGAAGGGGCAGGTGGGGCTCA---------------------CTCTTGAACCTGCTCCCAGAGGCCTCGG-------------------GGTCTGGAGATGATGGA-AGGAGTGGACGGTGGCTTAGCGGC-CTGCTCTGCCCAGCGTGGGAGGGACAGAAGCTGGACGGGACTT----------CCTCAGGGCTCCCCTCCTGCCCC-------------------------GGTCTCCCAAGAGGGCTTCCCCTCTG-----GCCTGA----------------------------CCCGTGCTGCTCCCACTGTGGTTAgagccggcggcatt-ggagttgagatccaaaggttgacatggga-cgggcacgcggagatttgggggagagagacgtt-taagtgcagagagCCTGA---------------------------------GA-GGGAAC-------------------------------------------------AAGC---------------TGGGAGGGAGTGAGGTGGGGAAG--AGGGAAGT-GGAAGAGGTCGGATT--------GCGTTGGG-CCTCTGGGTCTTATGAGAGATCCAAGGAAGGGTTTAGG---------GAAAGA--GGGGCAGGTGCACGTGA-GGCAGGGA----GAGGAGGAGGTCCCCACACATGTCCAGGGAAAGATTAGGATG i calJac3.chr22 C 0 I 1201 s mm10.chr7 3632211 1622 + 145441459 GGAGTGAAATAGCCTTG-AGTGCCCGGTGGCGGCTGGGAGGATGGAGCAGAAAAGCAG-AAAGGATAATGCTGTAGAGCCAACGAGTCACCGGATCTCACTGAAGGGACTC---------------CTGTGCTGTGTGCACCAAGGTTGCAGGTGTGGGGAACGTGGAC---------------------CTCCATCTGTATGGGAGACCTTGAGTGCCAGTCTGAGGATCTTG---------CTCGCTAGCCTCAAGGCTTTGGGAAG-CTATAGGAAGGTTTA------------ATTTTGGAGCAAGATGAGGTCAAGACCAGATTGACCCAGAGGATAGACTGCAGGAGAAAGATGAGAA----GCAGGAGTAAGGCTCCTGGAGAGGAATATAAGCCTCAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTCTTCAGCCCTT-ATGTAGC---CCCCTCAG-CCCCTCCTTTCTGA-TTCCATCCAGCCTCCACCTCAGT---CCCCAGCTTCGTTCCT------------------------CCCC--CATCCATAT--CCCTTCTTCTTTGTAGTGATGGGACCAGTGGAGGCAGCTCCTGAGTACCGAGTCATTGTGGATGCCAACAACCTGACTGTGGAGATAGAAAATGAGCTGAGTGAGTGAT-GGGAAGGGCTATGGAGACACCAGTATCCTGTGCTCTTCACTCTTT--CGTTA------------------------------------TGACCCAAAGGGAAGAACAGGCATGAACCTGGACCTCTTTTGTTTGCCTTTCTTGGGCA------AAAATATTGCCCTGATT-AGGTTCATCTTCTATAACAGAGTAACTAACATA------AATTGTACTCTCCTCCAT--------------------------------------------CATAAAAGTCTGAATAAGCAGGGCAGGTCTCGAGTCATCCTTTGACCCCCT-TGAGCAGCCAGGCTTTGCCACCTCGT---------ACGTGCTCCAGGATG--------ATGCC--------------CACCTCTGCATCCCTACCAGCAAATGTGGAGGGAAGATAGGCCATAGTT-GTTTCCTTAAGGCCACGATCTGGAAGTTGAAAATTG------------------TCACTT----TCAGTTCATATTTTGTAGACTTTTGTAGAACAAACTCCCAC--CTGCACATAGCATTGGAGACAGCTAGGAAATTAGAATGATTTGGG-GTTG-------------------------------GTTACTAGA----GAGG--TGGAAGTAGGTATTGGGGATAG-CAGCAGAGTCTGCCTCCC-CCTCAGTAGACACCTGTCCTTGATGTCCCATT-----TAGACATTATCCACAAGTTCATCCGGGATAAATACTCAAAGAGATTCCCTGAGCTAGAATCCTTGGTGCCCAATGCTCTGGATTACATCCGCACAGTCAAGGTGAGTGGAGAGAAG----------------TCTGG--------------------------------CTT--------------------GGGAAGAACTGGGGCCA---------------------CT---AGACCAT------GAAACCTCA--------------------AGTCTAGAAATAATGGAGAGTCATGAATGG-GGCTCAGTGGT-------------------GAGGGACAGATACTGGAATGGATGTGTCATGCACATCTCTTGCTTCCTTCCTCCCCTT-------------------------GGTTTCATGGGAGGA--TAACCACTG-----ACCTGG----------------------------CCCTTAC--CTCTGGCTGCAGTTGGAGCAGGTGTCCTT-TGAGCTGGCA----GAGGCCACCGCTGAA-----------------------------------TAAGAGCTAAGACCCTGC---------------------------------GT-GGGAAC-------------------------------------------------AAGC---------------AAGGATGAAGTCAGAAGGGGCAGGGAGGGAAGCTTGGAGAGGTCAGAAA--------GGGCAGAGAACATTAGATGT---------------GGAAGGTGTTGGCTTCTCTACAAGGGATTGGAGCGAGTGGAAGTGA-------AA----GAGCAGGGG--TCCTGCCTCTGTCCAGGA---GATCAGGATG i mm10.chr7 I 1141 C 0 s canFam3.chr1 19591870 1835 - 122678785 ggtgtgtgataagatggtggtgt---------cttgaaaaagtggggcttggacggtgcaaaggccag-actgtggagTTGGAGAGtcagcaggtacctacagagcagtgccc-gtgcgccaggcactattgtgggcatct---gggcactgg------------gggtgcagAACTTGTCTTCATAGTGTTTC------------------------CCGTCTGGGGAGCTTG---------CACCTCGGCCTCAGTGGTGTGGGGATCCCCTAAGGGGTT--------------AGTTCCGGGGCGACACGCCGTGGTGTCTAGACTGGCCTGGAG-----------AGAGAGAAATGGGAGGTGTGCCAGCGTGGAAACCCTGG-AAAACCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAC---------C-TCCAGGTTTTCTTATTAG------CCTCCCAGC-TCCCTTCCAACTACACCTCCTGACTCCCCTGGCTGTGGGAGCC-----------------TAGACACTCACCCACCAAGGCTGCTTCTCATCTTCACAGTGATGGGACCTGTTGAGGCGGCCCCTGAATACCGAGTCATCGTGGATGCTAACAACCTGACCGTGGAGATCGAGAATGAGCTGAGTGAGTGGC--AGGAAGG--GCAGAGATGGCCCTGCCTGCTGTCCCTTCCACTCT-CCTCCCATCCACAAGGAGAGGACAGGCAGGACCCTGGTTACTTTCCCCA---------------------CTGGCCTTCCCCAAGATCCTGCCCCAGACTCCTCATACTA-----GCTGTAGTCCAGATTCAGCTGCCataac--agcagcttaaa-aaaaagaaagtgtgcttttctccga--------------------------------------------tgtgagaatctggatgaggagtccagccctggagt------------------------caggctctttctgtc---ttgacctgccacctgtgtcagggcacaaagtgactgtc-cacctccagtcatcacctccacatccccaccagcagaacagggaagaaaa-agagggc--ac-agttctttaaggggg-------------------tgacctggaaattgcatgcatcactt-----catatgatatcctgtagac-----cagaactaacttgcagggccacacctggcagcaggggagt-----------agcgtttttgctgggtacccacgaacccagcta-aattcaggggttcatttatttaa-aaagaagcagggagatgggtgttgcggacagccagtggagtctgccTGCCCCCTTATCAG----CTACC-----TGTTCTCCCTACCTTAGACATCATCCATAAGTTCATCCGGGATAAGTACTCAAAGCGCTTCCCTGAACTGGAGTCTCTGGTCCCTAATGCACTGGATTACATCCGCACGGTCAAGGTGAGTGGACAGAGGTGGGGACTCAGGAACAGTGGAGTT-----------------------------CTCTTGACTACCCCTCATGTGAAGGGG--AGCAGGGAGCAGGTGAATGACCTGGAATGTGGTTAGTGAGGCTGCTCC---AGGCCTCAGCTGCCTTTCTCGTTATTGAGGCCTGCAGATACTGGCAGGGGCCGAGTGGTGGCTCAGCTGCTCCAGGCTCCCCAGCAAGAAAGGGATGAAGCCTGGAAAGGATGT----------TCTCATGGCTCCTCTGCCACCCATCCAATCCTGCTGCTTCCTTGGATGGGTCTCCCAGGAAGGGCTGGGAGCTGCTTGAGGCTGAGGGAGTAAGGAGGGAGATGAGGGGGTCTCTCATGC--CACCAACAGTGGTtggagcaggtggcatt--gagtcgatatctaaaggttgatgcaggggcagccatgcagagatatgggggggaaagcCT---GGAGTACCAAGAACGGGA---------------------------------GATAATGAC-------------------------------------------------AAGCTGTGGTATGTTCAGAAGGGAGGAAGTGAG-----------GGCAAAGT-CAATGAGGTTGCATCCCCTGTGACCCCCAAG-GCTTTGGGCCTTCTGGAAAAGCC------------------------ATGAGA--GGGCCAGATACTAGTGAGAGTGGGGACACCGGTGAGGAGATTCCTGTGTGCTGTCAGGAGGAGGTGAGGATG i canFam3.chr1 C 0 C 0 a score=34799.000000 s hg38.chr19_GL949753v2_alt 97608 9 + 796479 GCGGTGGGG s panTro4.chr19 59031117 9 + 63644993 GCGGTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909220 9 + 60714840 GCGGTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672420 9 - 106955855 GCGGTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59956595 9 + 64156825 GTGGTGGGG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 54960442 9 + 59248254 GTGGTGGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47090310 9 + 51301725 GTGGTGGGG i papAnu2.chr19 C 0 I 309 s chlSab2.chr6 46798097 9 + 50890351 GTGGTGGGG i chlSab2.chr6 C 0 I 78 s calJac3.chr22 45372218 9 + 49145316 GTGGTGGGG i calJac3.chr22 I 1201 I 1 s mm10.chr7 3633833 9 + 145441459 GTGGCACAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593705 9 - 122678785 GTGCAGGGG i canFam3.chr1 C 0 C 0 a score=294018.000000 s hg38.chr19_GL949753v2_alt 97617 142 + 796479 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGACGCAGGCCAGAGGCTTGTGAGGCCACA-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCGTTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT s panTro4.chr19 59031126 142 + 63644993 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCA-CTCCGACTTGATGCGGGCCAGGGGCTTGTGAGGCCATG-GTCTTTC-CAGACGCCACTCTGCCCGGGCTCCATTTCCAGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909229 143 + 60714840 AAGCCCCTGCAGGGA--AGCGAGGCTG-AGGATTCACGCCTCCGACTTGATGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGATGCCGCTCTGCCCAGGCTCCGTTTCAGGGTCAGCGAAAGCAGGGCAGATGGTGTGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672429 142 - 106955855 AAGCCCCTGCAGGGA--AGCGAGGCCG-CGGATTTGCC-CTCCGACTTGACGCGGGCCAGAGGCTTGTGAGGCCGCG-GTCTTTC-CAGACGCCGCTCTGCCCGGGCTCCGTATCCGGGTCATTGAAAGCAGGGCAGACAGTGTGGAT i nomLeu3.chr10 C 0 I 297 s rheMac3.chr19 59956605 121 + 64156825 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTCGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i rheMac3.chr19 I 1 C 0 s macFas5.chr19 54960452 121 + 59248254 AAGCCCCCGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47090628 121 + 51301725 AAGACCCTGCAGGGA--AGCGAGGCCG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCA-GTCTTCC-CAGACGCTGCTCTGCCCAGGTTCCGCTTCC---------AAAGCAGAGCAG----------- i papAnu2.chr19 I 309 C 0 s chlSab2.chr6 46798184 121 + 50890351 AAACCCCTGCAGGGA--AGCGAGTCTG-CGGGTTTGTG-CTCCGACTTGACACAGG-CAGAGGCTTGTGAGGCCGCG-GTCTTCC-CAGATGCTGCTCTGCCCAGGTTCCGTTTCC---------AAAGCAGAGCAG----------- i chlSab2.chr6 I 78 C 0 s calJac3.chr22 45372228 132 + 49145316 AAGCCCCTGCAGGGA--AGTGAGGCCACCGGATCAGTG-CTCCCACTTGTCATGGGCCAGAGGCTTGTGAGGCCTCG-GTC-TCC-CAGATGCCACTGTGCCCAGGCTCCATTTCCAGGTCAGCCAAAGCAGAGCAGA---------- i calJac3.chr22 I 1 C 0 s mm10.chr7 3633842 120 + 145441459 -------------GA--ATTGTGTCTG-TGGAATAAAG-TGCGCTTTTGAC---GGCC-----TCTTTAGTGCAGCATGTCTTCCTTGGAGGCTGCTTTG-CCAGCTTGTACTTCTGCATCCGT-AGAGCAGAGCAGGCACACTGAT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19593714 109 - 122678785 GCATCCATGCAGGAAGCAGTGTGGTCA-AAG--TTGCA-TTTTGAGTTGCTGCAGA-CAGTGG---------------GTCTGCC-T-----------------GGTTCTGGTTCTAGACCAGC-AGTGCAGGAGCAACGGTACCGAT i canFam3.chr1 C 0 C 0 a score=1096583.000000 s hg38.chr19_GL949753v2_alt 97759 325 + 796479 GCTTGACGTGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCTAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------TCGAGGGAGGC-----GCCGGGCC----C-T s panTro4.chr19 59031268 325 + 63644993 GCTTGAGGCGGTGGAGGCAGGAATGGTGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCGAGCCTCCCCTATCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGGC-----GCCGGGCC----C-T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909372 329 + 60714840 GCTTGAGGCGGTGGAGGCAGGAACGGTGTGGATGCTTGAGGTGGTGGAGGCAGGAG-AGGTCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCGCCAAGAAGAGACCCGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCGAGCCTTCCT--GAGTTCCCAAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GTGAGGGAGGC-----GCCGGGCCCGGGC-T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102672868 328 - 106955855 GCGTGAGGCGGTGGAGGCAGGAACCGTGTGGACGCTTGGGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGCAGAG---------------ACCCTGACTGTCCCAGTGTCCCCAAGAAGAGACCTGAGGAGGTGCTG-AGCAAGAGAGGTTC-TCCAGCCTCCCT--GAGTCCCCGAGCCTCCCC-GTCTTCTCTGCTCACCCCTAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCACT--------------------------------------GCGAGGGAGGT-----GCCGGGCCCGGGC-T i nomLeu3.chr10 I 297 C 0 s rheMac3.chr19 59956726 304 + 64156825 ----------------------ACGATGTGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-GGCCAGAGAGGCTC-TGAAGCCTTCCT--GAGTTCCTGAGCCTCCC--GTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960573 306 + 59248254 ----------------------ACGGTGCGGATGCTTCAGGCGGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGCTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCTGGGCCCGGGC-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47090749 307 + 51301725 ----------------------ACGGTGTGGATGCTTCAGGcggtggaggcaggag-aggccCCCAGTGTGGAG---------------ACCCTGACTTTCCCAGTGTCCCCGAGAAGAGACCTGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCGCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT--------------------------------------GGGAGGGAGGC-----GCCGGGCCCAGGC-C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798305 306 + 50890351 ----------------------ACAGTGTGGTTGCTTCAGGCAGTGGAGGCAGGAG-AGGCCCCCAGTGTAGAG---------------ACCCTGACTTTCCCAGTGTCCCCAAGAAGAGACCCGAGTAGGTGCAG-AGCCAGAGAGGTTC-TCAAGCCTTCCT--GAGTTCCTGAGCCTCCCCTGTCTTCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGCGTCACCGCCTCCACCACCCAGGGGTATGTCCGCT---------------------------------------GGAGGGAGGC-----GCCGGGCCCGGGC-C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372360 314 + 49145316 -----------------------GAGTGTGGATGCTTCGGGTGGCAGAGGCAGGAG-AGGCCCCCAGTGCAGAGACCCTCAGTGTAGACACCCTGACTTTCCCAGTGTCCCCAAGACAAGACCTGAATAGGTGCTG-AGCA--AGAGGTTC-TCCAGCCCTCCT--GAG--CCCAAGCCTCCCT-GTC-TCTCTGCTCGCCCCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAATGAGAACCTGCAGCAGATCCTCACCAATGCCACCATCATGGTCGTCAGTGTCACTGCCTCCACCACTCAGGGGTATGTCCGCT--------------------------------------GCGAGGGAGG------ACTGGGCCCGGGC-T i calJac3.chr22 C 0 C 0 s mm10.chr7 3633962 348 + 145441459 ---------GCTTTAGGCAGGGAGGTTGTAAA-------AGTGTAAAAGGAAAGAG-AGGCCTCCAGTGTATGG---------------ACCTTAGCTTTCCCAGCTTCCTCAAGGGGAGACCTCTGTTGGTGTTGTAGCAAAAGAGGGTCTTTTGGGCTTACTACAAATTCTC---CCTCCCCTTCCTAC----------CCCAGGAGCTGGGCAACAGCCTGGATAAGTGCAAGAACAATGAGAACCTCCAGCAGATCCTGACCAATGCTACTATCATGGTTGTTAGTGTCACTGCCTCTACTACCCAGGGGTATGTATGCCAAACGGTAATGTGCCGCAAGCCTACCATAGGACAATTAACAGGAGAGACAGAATGGAGGGCATGGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19593823 289 - 122678785 ------------------------GTTCTGAGTGGTGAAGTCCTGGGAGCTGGGAGCAGGCAGCCTTCATCCAG---------------ACCCCAGATGTCCCC---------AGAAGAGACTTAACTAGGTGCAGGGGCAAGAGAGCTCC-TCAGGCCTTCCT--GAATCCCTGTGCCTCCCC-CTCTTGCCTTCTCACCTCCAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAATAACGAAAACCTACAGCAGATCCTAACCAACGCCACCATCATGGTCGTCAGCGTGACTGCCTCCACCACCCAGGGGTGCGTGCATA------------------------------------------GGGTGGG-----ACCATGCACT----- i canFam3.chr1 C 0 I 1393 a score=114000.000000 s hg38.chr19_GL949753v2_alt 98084 43 + 796479 AATGG----GATTGGGGATTA-GGCTGGAGCTACACACGCAGGTGTac s panTro4.chr19 59031593 43 + 63644993 AATGG----GACTGGGGATTA-GGCTGGAGCTacacacacaggtgtac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909701 43 + 60714840 AATGG----GACTGGGGATTA-GGCTGGAGCTACATATGCAGGTGTGc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673196 43 - 106955855 AATGG----GACTGGGAATTA-GGCTGGAGCTACACACGCAGGTGTGc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957030 43 + 64156825 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960879 43 + 59248254 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091056 43 + 51301725 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTgggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798611 43 + 50890351 AGTGG----GACTGGGGATTA-GGCTGAAGCTACCCACGCAGGTGGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372674 40 + 49145316 AGGGG----GACTGCGGATTA---TTGAAG-TACACATGCAGATGTGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3634310 41 + 145441459 AGTGGTGCTGACTGAGAATTATGGCC-------CCTAGACAGATGGAA i mm10.chr7 C 0 C 0 e canFam3.chr1 19594112 1393 - 122678785 I a score=91431.000000 s hg38.chr19_GL949753v2_alt 98127 67 + 796479 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------cacacaGAACCGAGAGGGC---TGGGGCT---GGGCACAC s panTro4.chr19 59031636 61 + 63644993 acac----gcacacaca------------------------------------catacaca------catgcaca----caca----------------GAACTGAGAGGGT---TGGGGCT---GGGCACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909744 77 + 60714840 acat----gcacgcaca------------------------------------cacacacg------cacacaca----cacacacacacacacacacaGAACTGAGAGGGT---TGGGGCT---GGGCACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673239 57 - 106955855 acac----gcacacaca------------------------------------catacaca----------cgca----caca----------------GAACTGAGAGGGT---GGGGGCT---GGGCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957073 69 + 64156825 atac----acacacacg------------------------------------cacacaca------cacacacatgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960922 75 + 59248254 ATac----acacacacgcgca------------------------------cacacacaca------cacacacacgcgcaca----------cacacaGAACTGAGAGGGT---GGGTGCT---GGGCAC-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091099 49 + 51301725 atat----gcacacaca--------------------------------------------------------------caca----------cacacagaactgagagggt---gggggct---gggcac-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798654 65 + 50890351 ATAT----Gcacacaca------------------------------------cacacgca------cacacaca----taca----------cacacaGAACTGAGAGGGT---GGGGACT---GGGCAC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45372714 108 + 49145316 ACAC----ACACACACACATATGAGAGGGCGGGACTGGGGATTACTGAAGCTacacacgcagatgtgcacacaca----caca----------cacacataACTGAGAGGGC----GGGACT---GGGGATAC i calJac3.chr22 C 0 I 1444 s mm10.chr7 3634351 72 + 145441459 TTTTTATGATAGTCCCA------------------------------------GAACTAAA------CAAACACA----CATA----------CATACACAGCTGAGACAGTAGATGGGGCT---GACCAC-- i mm10.chr7 C 0 I 41 s canFam3.chr1 19595505 58 - 122678785 ACGT----GCACATATG------------------------------------TGTACAGA------CGTGCACA----CACC------------------GCTAGGAGGAC---ACGGGCTCTCATGC---- i canFam3.chr1 I 1393 C 0 a score=456944.000000 s hg38.chr19_GL949753v2_alt 98194 149 + 796479 CAGGCAGGCG-----------------------------------------------------------------------GGAGATC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgcgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTATGTGGAGTCC s panTro4.chr19 59031697 149 + 63644993 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCATCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909821 115 + 60714840 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAAGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673296 149 - 106955855 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGCGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957142 149 + 64156825 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54960997 149 + 59248254 CAAGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091148 149 + 51301725 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCCGCCCC----TGCAGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGTGACATGGCGCTGGAGCTGAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798719 149 + 50890351 CAGGCAGGCG-----------------------------------------------------------------------GGAGACC------------CAGGAG---------------------------------------------------------------------------------GCTGGG---------------CCCACCTGCCCC----TGCAGGCAGCAGCTGTCggaggaggagctggagcggctggaggaggcctgtgacatggcgctggagctgAACGCCTCCAAGCACCGCATCTACGAGTACGTGGAGTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3634464 331 + 145441459 tgggtaggagcaccgactgctcttctaaaggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgtaaggagatctgatgccctcttctggagtgtctgaagacagctacagtgtatttacatataataaataaatacatcttttaaaaaaaagaaaGAAATGTACCTAGCAAAGCTGGAGTCT-GCCCACAACCCTCACGTGCTCCACAATGTAGGCAGCAGCTGTCGGATGAGGAGCTAGAGCGGCTAGAGGAGGCCTGTGACATGGCACTGGAGCTGAATGCCTCCAAACACCGCATCTATGAGTATGTGGAGTCC i mm10.chr7 I 41 C 0 s canFam3.chr1 19595563 166 - 122678785 TGGTCAAGTG-----------------------------------------------------------------------GGATCCC------------CAGGAGGG-------------------------------------------------------------------------------GCAGGGGTCCAACCCAGTCACATCATTAACCAC----TGCAGGCAACAGCTGTCAGAGGAGGAGCTAGAGCGGCTGGAGGAGGCCTGTGACATGGCACTAGAGTTGAACGCCTCTAAGCACCGCATCTACGAATATGTGGAGTCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45372822 1444 + 49145316 I a score=748965.000000 s hg38.chr19_GL949753v2_alt 98343 209 + 796479 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAAGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA s panTro4.chr19 59031846 209 + 63644993 CGGATGTCCTTCATCGCACCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGTCCCC-GGGCTGGGTCCCATGGAG---CG--------GGGG--TCTGCTGACACTGTGACCTTGGGAAGGCTACAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGACCTCAGCACCCCGTCTG-CCTGGACATCACAGAGGTCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55909936 208 + 60714840 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCAAGGAG---CG--------GGGC--TCTGCTGACACTGTGACCTTGGGGAAGCTGCAT-CCTTTTCTGTAGAATGGGGGCTT-TGGCACCTGGG-CTCGGCACCCCGTCTC-CCTGGACGTCACAGAGGTCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673445 207 - 106955855 CGGATGTCCTTCATCGCGCCCAACCTGTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGG---TCTGCTGA-ACTGTGACCCCGGGGAAGCTGCAT-CCTTTTCCGTAGAATGGGGGCTT-TGGCACCTGGGCCTCTGCACCTTGTCTC-CCTGGACATCACAGAGGTCAGCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957291 210 + 64156825 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------GGAC--TCTGCTGACACTGTGATCTTGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACGTGACAGAGGTCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961146 210 + 59248254 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCT-GGGCTGGGTCCCATGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATGACAGAGGTCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091297 210 + 51301725 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCGTCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---CG--------AGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCTTCCCTTTTCTATAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCATCTC-CCTGGACATCACAGAGGTcagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46798868 210 + 50890351 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATTATCGGGGCATCCACGGCCGCCAAGATCATGGGTGAGGCCCC-GGGCTGGGTCCCGTGGAG---TG--------GGGC--TCTGCTGACACTGTGATCTGGGGGAAGCTGCATCCCTTTTCTGTAGAATGGGGACTT-TGGCACCTGGGCCTCAGCACCCCGTCTC-CCTGGACATCACAGAGGTCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374266 219 + 49145316 CGAATCTCCTTCATATCGCCCAACCTGTCCATCATCATCGGGGCATCCAGGGCTGCCAAGATCATGGGTGAGGCCCCGGGGCTGGGTCCCATGGCG---GGGATGGGGAGGCG--TCTGCTGACACTGTGGCCTTGGGAAAGCTGCATCCCTTTTCTTTGGAGGGGGGGCTT-TGGCACCTAGGCCTCAGCACCTGGTCTC-CCTGGACATCACAGAGGTCAGCCA i calJac3.chr22 I 1444 C 0 s mm10.chr7 3634795 174 + 145441459 CGGATGTCCTTCATTGCACCCAACTTGTCCATCATCATTGGAGCATCCACAGCTGCCAAGATCATGGGTGAGGTCCC--AGCGGGGTCCCTTTGGC---AG--------AG----TCTGCTGATA----------GGTTAGGTTGCCT----------TGGAAAGTGGGGTT-TGGCCTATTG-----------TGTTGTC-CCCTGAAGT--CAGAGGTCAGCCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19595729 213 - 122678785 CGGATGTCCTTCATCGCGCCCAACCTCTCCATCATCATTGGGGCATCCACAGCCGCTAAGATCATGGGTGAGGCCCT-G----GGGTGCGGTAGAGATATG--------GGGCCATCCTCGGACAGTGTGACCTTGAGGAAGCCACGTCCCTCCTCTACGGGACAGGACCCTACTCCCCCTCACCCTCATCCTGTCATCCCTCCTAGAGATCACAGAAGTCACCCA i canFam3.chr1 C 0 I 1193 a score=48845.000000 s hg38.chr19_GL949753v2_alt 98552 10 + 796479 GCCTGGCACA s panTro4.chr19 59032055 10 + 63644993 GCCTGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910144 10 + 60714840 GCCTGGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673652 10 - 106955855 GCCTGGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957501 10 + 64156825 GCCTGGCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961356 10 + 59248254 GCCTGGCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091507 10 + 51301725 gcctggccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799078 10 + 50890351 GCCTGGCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374485 10 + 49145316 GCCTGGCACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3634969 10 + 145441459 GTTTGGCACA i mm10.chr7 C 0 I 1203 s canFam3.chr1 19597135 10 - 122678785 GCCTGGCACA i canFam3.chr1 I 1193 C 0 a score=1206783.000000 s hg38.chr19_GL949753v2_alt 98562 410 + 796479 CAGCAAAGCCTCGTCTGTGGGAAaaacactcacccacagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGCCATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTTGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTTACTCACCCCCACCT-CTCTGCTTTCTTCTGAccgcccc----cccttcct s panTro4.chr19 59032065 403 + 63644993 CAGTAAAGCCTCGTCTGTGGGAAAAACACTCCCCCACagctccttct-ccctcccctgtgc---------------cggaaacccagagatga-ccacacctaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAACGGCGTTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGG-GGCCTCCTCCCTG--CACCCCCAGGCC-------CTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCACGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCATCGAGGAATCCAACCAGAACTTCATGTAAAGGTGCCCGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccc----cccttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910154 413 + 60714840 CAGCCAAGCCTTGTCTGTGGG-AAAGCACTCACCCACAGCCCCTTCT-CCCTCCCCTGTGC---------------TGGAAACCCAGAGAGGA-CCACACCCGGGCCCTGTTGTCAGAGAGCGCCTGGTTTGATGAAAATGGTTCCAAAACACAGACATCCCTGGAACAGGGGTAGTGTGGCT----TAGCACAAATGTGGTGATCAGCTTCCTGTTGAG-GGCCTCCTCCCTG--CACCCCCAGGGCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGTGGAATGGGCCAGGTCG---CCCACCTGGCAGGG-CCACCGAGGAATCCAACCAGAACCTCATGTAAAGGTGCCTGGCACACGTCGAGCCCCCAGGCAGATTCACGCACccccacct-ccctgctttcttctgaccgcccctgctcccttcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102673662 414 - 106955855 CAGCGAAGCCTTGTCTGTGGGAAAAACACTCACCCACAGCTCCTCCT-CCCTCCCCTGTGC---------------CGGAAACCCAGAGATGA-CCACACGCAGGCGCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAACGCCATTCGTGTGGCT----TAGCACAAACGTGGTGGTCAGCTTCCTGTTGGA-GGCCTCCTCCCTG--CACCCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGAAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCCCAGCACACGTCGAGCCCCCAGGCAGATTCACGCACCCCCACCT-CCCTGCTTGCTTCTGAccgcccccgctcccttcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957511 401 + 64156825 CAGCAAAGCCTTGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGGACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961366 401 + 59248254 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccccagctcctcct-ccctcccctgtgc---------------cggaaagccagagatga-ccacacccaggccctgttgtcagggggctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCTG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTTTGCATCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCGCCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091517 401 + 51301725 cagcaaAGCCTCGTC--TGGGAGAAACACTCACCCACAGCTCGTCCT-CCCTCCCCTGTGC---------------CGGAAACCCGGAGATGA-CCACACCCAGGCCCTGTTGTCAGGGAGCTCCTGGTTTGGTGAAAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACAAACGTGGTGGTCAGTTGCCTGTTGGG-Ggcctcctccctg--ca-ccccagGCCAGCTGccctccctctctgagcctcctttGCGTCTGCCCCTCGCGGAATGGGCCAGGTCA---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCTAGAACCTCATGTAAAGGTGCTTGGCACATGTCGAGCCCCCAGGCAGATGTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799088 401 + 50890351 CAGCAAAGCCTCGTC--TGGGAGaaacactcacccacagctcctcct-ccctcccctgtgc---------------cagaaacccagagatga-ccacacccaggccctgttgtcagggagctcctggtttggtgaaAATGGTTCCAAAACACAGACATCCCTGGAATGGGGGTAGTGTGGCT----TAGCACACACGTGGTGGTCAGTTGCCTGTTGGG-GGCCTCCTCCCCG--CA-CCCCAGGCCAGCTGCCCTCCCTCTCTGAGCCTCCTCTGCGTCTGCCCCTCGCGGAATGGGCCAGGTCG---CCCGCCTGGCAGGG-CCACCGAGGAATCCAGCCAGAACCTCACGTAAAGGTGCTTGGCACGTGTCGAGCCCCCAGGCAGATTTGCGCACCCCCACCTCCCCCGCTTTCTTCTGACCGCCCC-----------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374495 394 + 49145316 TAGCAAAGCCCTGTCCGTGGGAAAAACACTCACCTACAGCTCCTCCT-GCAG-CCCTCTGC---------------CAGAAACCCAGAGCTGA-CCACACCCAGGCC--GTTGTCAGGGAGCTTCTGGTTTGGTGAATATGGTT------CACAGACATCTCTGGAATGG-GGCAGTGTGGCCTATGTAGCACAAATGAGGTGGTTGGCTTCCTGTCTAG-TGCCTCCTCCCTG--CA-CCCCAGACCAGCTGCCCTCCCTTTCCCAGCCTCCTTTGCATCTGTCCCTCGTGGAATGAGCCAGGTCC---CCCTCCTGACAGGG-CCACTGAGGGGTCCAACCAGAGCTTCATGTAAAGGCGCCCGGCACACGGTGATCCCCCC-GCAGATTCGCGCACGCCCACCT-CTCCGCTTTCTTCTGACTGCTCC------------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19597145 393 - 122678785 -AGCAGACCCCTGTCAGAGGTAGGCATTTTTACCTACAGCTCTTCCTCCCCTCCCCTGGGCCTGCAGATGCGCTCACGGGAACCCAGAGATGATTCACAT-TAGGCCCTGTCATCAGGGTGTCCCcagtatggtggtaactgttataaaaca------------gagcaggggctgtgtagct----ctg--cagacttgggggcaagtt-cctgttgggctgctgcctcactttccatcctcaggcaggtgatttcacctctctgagcctcctctgaatc--ctccttctgaaaggggacttatcaggccctcccaggcagagcccacccagaaattcaaccagaaactcacctaaaggcacaaagcattcggtgagcccccaaacaaatgT---------------CCTGTGTTCCTTCTGACCTGTTT------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3634979 1203 + 145441459 I a score=1118082.000000 s hg38.chr19_GL949753v2_alt 98972 295 + 796479 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTGAGC----------------C---CACTGCGTCATGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- s panTro4.chr19 59032468 295 + 63644993 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACGAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCACCGGTAAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA--CCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910567 296 + 60714840 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCAGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCCCCGGCCCCCCTGGAGCCTTCCGCTG---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACGGTAGCACTCAGGAGCTGGGA-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674076 294 - 106955855 ccctccctcccaccGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTATATCTACCACAGTGACATCGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACGGCCCCTCCGCTG--CCCCCCGGAGCCTTCCGCTA---------------TGCCCAGA---CAGCCTGAGC---AGCCA-CCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCTGGGA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59957912 296 + 64156825 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccgggg-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54961767 296 + 59248254 GTCCTCCTCCCACCGCAGGCGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACCGCGTCACAGCCCCTCCCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgacagtagcactcaggagccggga-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47091918 296 + 51301725 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCCCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGC----------------C---CACTGCGTCACGGCCCCTCCCCCGGCTCCCCTGGAGCCTTATGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCTG--GCCCAGCTGACAGTAGCACTCAGGAGCCGGGA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799489 311 + 50890351 GTCCTCCTCCCACCGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCCGCACACCGGCTACATCTACCACAGTGACATTGTGCAGTCCCTGCCCCCGGTGAGCCGCTGCGCCACGTGAGC---CACTGCGCCACGGCCCCT-CCCCGGCTCCCCTGGAGCCTTCCGCC----------------TGCCCAGA---CGGCCTGAGC---AGCCACCCCCACCATCtg--gcccagctgatggtagcactcaggagccggga-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45374889 286 + 49145316 CTCTTCCCTCCCCTGCAGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACACTGTCGGGCTTCTCATCCACCTCAGTGCTGCCCCATACCGGCTACATCTACCACAGCGACATCGTGCAGTCCCTACCCCCGGTGAGC----------------C---CACAGTGTCATTG-CCTGCCCCTGGCTCCCCTGGAACTTTCCACTG---------------TGCCCAGA---CAGCCT-AGA---AGCCACCCCTACCAT-----------CTGACAGTAGCACTCAGGGGATGGGA-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3636182 256 + 145441459 CCTCACCTCTTGTTGCAGGTGTGGCTGGAGGGCTCACCAACCTCTCTAAGATGCCTGCCTGCAACATCATGCTGCTGGGAGCCCAGCGCAAGACCCTGTCTGGCTTCTCTTCTACCTCAGTGTTGCCTCATACTGGTTATATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCAGTGAGT----------------CCTTCACCTTGTC----CCCTTCCCCCAGCCACC---AGGCCTT----------------------------------------------------------ATCTG--GCTTGGCTGGCAATATTCCTCAGGCTCCTGGA-- i mm10.chr7 I 1203 I 95 s canFam3.chr1 19597538 309 - 122678785 CCCTCCTTCCTGTTGCAGGGGTGGCTGGGGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTTGGGGCCCAGCGGAAGACGCTGTCCGGCTTCTCGTCCACGTCTGTGCTGCCCCACACTGGTTACATCTACCACAGTGACATTGTGCAGTCTCTGCCCCCGGTGAGT---------------GC---CACTGGCATGTGGCTC-----------CCCGCAGAGCCTTTTGCTGGGCCAGAAGCAGCCTTGTCCAGAGGGCAGTGTGAGCCCAAGCAAGTTGCCCCCTCTGCTCCTCAGTTCCCATTGAC---TAGGAGCTcagagg i canFam3.chr1 C 0 C 0 a score=1085808.000000 s hg38.chr19_GL949753v2_alt 99267 441 + 796479 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcaggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcacatgaagcacttacagttcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAACT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccatcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg s panTro4.chr19 59032763 441 + 63644993 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctcctcccctatcaaatgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggtcaggcctagctcacaacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccgaagaccaccctcaggtttgaccattcactagaaagactcacagaatccactgagggctgc------------------------------------acatcag----ccatgg--------ggagagacacactggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcgggacacatcaccctcccagcatcgacgcctgacagcacacaCACAGGCC-----CGCTAGCCTggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55910863 441 + 60714840 acagggtggcatgggacgtgagagccagggctctgcagcacaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcgtgaacgctctgtgcctcagtctcctctcctatcaaatggcag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttacaggccaggcctagctcacgacaagcAGCATCGGGTTAGTGTGCAACT------GCTccgaagaccaccctcaagtttgaccattcactagaaagactcacagaatccaCTGAGGGCTGC------------------------------------ACATCAG----CCATGG--------GGAGAGACACACAGGAGGGGCAGGAGAGGTCACCAACCTCGGAGCTTCCGGG-GTCCTCTCCCTGCAGTCGGGACACATCACCGTCCCAGCATCGACGCCTGACAGCACACACACAGGAC-----CGCCAGCCTGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674370 453 - 106955855 acagggtggcatgggacgtgagagccagggctctgcagcagaccagctccag--------------------cacccaccagtcgggtgactg-----------------tgggcaagaggcatgagcgccctgtgcctcagtctcctcccctatcaagtgggag-cacagcgcctgcttcat-gagttgggacgagggctcagtgcagatgaagcacttataggtccggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------GCTccaaagaccaccctcaggtttgaccattcactagaaagactcactgaatccactgagggctgc------------------------------------tgtgctggggactatagtttataacagatagagacacaggaggggcaggagaggtcaccaacctcggagcttcccgg-gtcctctccctgcagtcaggacacatcaccgtcccagcatcggtaactgacagcacacacacaggac-----cgccagccTggcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958208 426 + 64156825 gcagggtagcatgggatgtgagagccagggttctgcagca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA--CACGGAA-CCCCTGAGGGCTGC-TGTGCTGGGGACTG---------TATAacagattaacattag----ccacag--------ggagagacacacaggaggagcagaagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacag----cacacagggC-----CGCCAGCCTggcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54962063 435 + 59248254 acagggtagcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgactg-----------------tgggcaagaggtgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgcctgcttcac-gagtttgggcgagggctccatgcagacgaggccctcacaaggcaggcctagctcacgacaagcAGCGTCGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGa--cacggaa-cccctgagggctgc-tgtgctggggactatagtt----tataacaaactaacattag----ccacag--------ggagagacacacaggaggagcaggagaggtcaccaacctcggagggcgatgt-gtcctctccctgcagtcaggacacatcgccctcccggcatcgatgcctgacagcacacacacagggc-----cgccagccTggcg i macFas5.chr19 C 0 I 15700 s papAnu2.chr19 47092214 427 + 51301725 ACAGGGTAGCATGGGATGTGAGAGCCAGGGTTCTGCATCA------------------------------------CACCTGTCGGGTGACTG-----------------TGGGCAAGAGGCGTGAGCgccctgtgcctcagtctcctccccTCGCAAATGGGAG-CACAGCGCCCGCTTCAT-GAGTTGGGACGAGGGCTCAATGCAAATGAAGCCCTTACAAGGCAGGCCTAGCTTACGACAAGCAGCGCTGGGTTA----GCAGCT------GCTCCGAAGGCCACC--------------GTCACTGGAAAGA-----------ACCTGAGGGCTGC-TGTGCTGGGGACTATAGTT----TATAACAAATTAACATTAG----CCACAG--------GGAGAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGATACATCGCCCTCCCAGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCctggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46799800 436 + 50890351 acagggtggcatgggatgtgagagccagggttctgcatca------------------------------------cacctgtcgggtgaccg-----------------tgggcaagaggcgtgagtgccctgtgcctcagtctcctcccctcgcaaatgggag-cacagcgtgtgcttcat-gagttgggacgagggctcaatgcagacgaagccctcacaaggcaggcctagctcacgacaagcAGCGTTGGGTTA----GCAGCT------GCTCCGAAGGCCACT--------------GTCACTGGAAAGA--CACGGAAGCCCCTGAGGGCTGC-CGTGCTGGGGACTATAGTT----TATAACAAATCAACATTAG----CCACAG--------GGAAAGACACACAGGAGGAGCAGGAGAGGTCACCAACCTCGGAGGGCGATGT-GTCCTCTCCCTGCAGTCAGGACACATCGCCCTCCCGGCATCGATGCCTGACAGCACACACACAGGGC-----CGCCAGCCTggcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45375175 487 + 49145316 acagggtggcacggggcgtgagagccaggactctgcagtccaccagctctggtgcccaggctctggcagcgccacccaccaatca-gtgaccg-----------------tgggcaagaggcgtgagcgccctgtgcctcagtctc--cccccatcagacgggag-cacagcacctgcttcat-gagttaggacgagggctcaatgcagatgaagcccttccaagtcaggcctagctcacgacaagcAGCGTCGGGTTAGCGTGCAGCT------gctccaaagaccaccctcaggtctaaccgttcactagaaagactcatagaaccccctgaggactgc-tgtgctggggact-tagtt----tataacagtttaacatcag----ccatgg--------g----gacacacaggaggggcaggagaggtcagtgcccctggagcttcccag-gtcctct--cTGCCATCAGGGTACATCAGCCTCCCAGCTTTGATGCCTGGCAGCACATACACAGACCTAGAACACAAGCAGGAgg i calJac3.chr22 C 0 I 2 s canFam3.chr1 19597847 461 - 122678785 atagggtcacacggggcataggaacaaggaccccagagcaga------------------------------tgtacaggggtagggattctggagctctacttaacaactgggcaagaggcatgag----ctgtgcctcagtgt-------tgtaaaatgggggaaatagaacctgcttcctggggttgtgattaggactcc---tatatgaaacactt-----ccaggtcttgcacataacaagcgATGTC--ATTAGCTtgcaagttgtaggggtctccaagccatccttgggttcagtagcccactagaggggtgtacagactccaagttgacccacttgggctatggtttgtcgtcgtgaaaggacagact-atttcag----ccactg--------gaggaagcgtatgaggcaggagccagaagt-gccagcctcagcgctttcagtcatcctctcc-----atcaggacatgtcac--tcctggcctccacatgtgacagcgtgcagaaagaac-----cgcccccaggg-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=37311.000000 s hg38.chr19_GL949753v2_alt 99708 15 + 796479 gggcgcagtggctcg s panTro4.chr19 59033204 15 + 63644993 gggcgcagtggctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911304 15 + 60714840 gggcgcagtggcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674823 15 - 106955855 gggcacggtggctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59958634 15 + 64156825 gggcgcggtggctca i rheMac3.chr19 C 0 I 1923 s macFas5.chr19 54978198 15 + 59248254 gggcgcggtggctct i macFas5.chr19 I 15700 C 0 s papAnu2.chr19 47092641 15 + 51301725 gggcacggtggctca i papAnu2.chr19 C 0 I 1561 s chlSab2.chr6 46800236 15 + 50890351 gggcaccgtggctca i chlSab2.chr6 C 0 I 1788 s calJac3.chr22 45375664 15 + 49145316 aggcacggaggctca i calJac3.chr22 I 2 C 0 s canFam3.chr1 19598308 11 - 122678785 aggcccagctg---- i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=85762.000000 s hg38.chr19_GL949753v2_alt 99723 29 + 796479 tgcctgtcatcccagcactttgggaggcc s panTro4.chr19 59033219 29 + 63644993 cactggtcatcccagcactttgcgaggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911319 29 + 60714840 cgcctgtcatcccagcactttgggaggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674838 27 - 106955855 --cctgtcatcccagcactttgggaggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960572 29 + 64156825 cgcctgtcaccccagcactttgggaggcc i rheMac3.chr19 I 1923 C 0 s macFas5.chr19 54978213 29 + 59248254 cacctgtcaccccagcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094217 29 + 51301725 cgcctgtcaccccagcactttgggaggcc i papAnu2.chr19 I 1561 C 0 s chlSab2.chr6 46802039 29 + 50890351 tgcctgtcacgccagcactttgggaggcc i chlSab2.chr6 I 1788 C 0 s calJac3.chr22 45375679 29 + 49145316 tgcctgtaattccagcactttgggaggcc i calJac3.chr22 C 0 I 467 s canFam3.chr1 19598319 29 - 122678785 agccttgaagttcagtctttcctggggct i canFam3.chr1 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I a score=490022.000000 s hg38.chr19_GL949753v2_alt 99752 172 + 796479 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaa-ctagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg s panTro4.chr19 59033248 173 + 63644993 gaggcgggcagat-cacctg---aggtcaagtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatagtggcacacacttataatcccagctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911348 173 + 60714840 gaggtgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctaccaaaaatacaaaaaaactagct-gggtatggtggcccacacttataatcccatctacttgggagg--ctgaggcaggagaatcacttgaacccaggaggtggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102674865 173 - 106955855 gaggcgggcagat-cacctg---aggtcaggtgttcgagaccagcctggccaacatggtgaaaccccatctccactaaaaatacaaaaaaactagcc-gggtatgtttgcacacacttataatcccaggtacttgggagg--ctgaggcaggagaatcgcttgaacccaggaggtggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960601 173 + 64156825 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978242 173 + 59248254 aaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaatcgcttgaacccaggagatggaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094246 173 + 51301725 gaggcgggcagat-catctg---aggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctaaggcaggagaatcgcttaaacccaggagatggaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802068 173 + 50890351 aaggcgggcagat-catctg---aggtcaggagttcgtgaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaacaatgagcc-aggtatggtggcgcacacttacaattccagctacttgggagg--ctgaggcaggagaattgcttgaacccaggagatggaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376175 172 + 49145316 gaggcaggtggat-gactgg---agatcaggagtttgagaccagcctggccaacatggtgaaacctcatctctact-aaaatattacaaaattagtc-aggtgtggtggcacatacttgtaatcccagctgcttggaaag--ctgaggcaggagaattgcttgaacccaggaggtggagg i calJac3.chr22 I 467 C 0 s canFam3.chr1 19598348 152 - 122678785 tagttgaatagatgtgactgggtagcccaggtggttga------tctgggctccaggttgagagcctgt----------aacccaaagacctcaccctaaata---------acacggttggtctctGCCTTGTCCGAGGCCCCCAGGCCAAAAGATCACT---GCCCAGGAGATGAGGG i canFam3.chr1 C 0 I 3047 e mm10.chr7 3636438 95 + 145441459 I a score=2712050.000000 s hg38.chr19_GL949753v2_alt 99924 960 + 796479 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa------------------caagaCAGGTTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCGACTGTGGCGAGTTACCTCAGGCTCACGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGCAGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----GTTTTTTTTGTG--------GTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCGCCACCGCCTCACAGCCCTGGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccgaggggcgtgcttagcatggggctggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCACAGTCACCACCGTCCTCGTTGTCAGCGTGCCTTACTGTCATCCTTACCTGA--TGGCCACTTATCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTAGGAGCTGAGAGCACACACCTCT s panTro4.chr19 59033421 965 + 63644993 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaaa------------acaaGCAAGacaggttctgggacaga------------caggcctgggtccagaccctgctctgtcCGACTGTGGCAAGTTACCTCAGGCTCACGGCCTTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCAAGGCTGGGTGGGCACTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTGTG----TGTGGTCTTTTCTGCGACCCTTTAGGTCAGGCACTGCTACTGGAATACA--CCCAGGGAGGCTGGCAGGTCACCCCATCCTGGGAGGAGAGAGAGTGGGCGATAGAACCCAGGACGGGTGGGCCTGGGGCTCGGGGCTCCAGCTGCCTCACTGCACCCCTGCCATCACCACCGCCTCACAGCCCTGGGCATATAGGTTAAACCTGCCCCAGG-AGCCTGATGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATCTGGCCATCTCACATCGGTCCAGGCACAGGCCGTAGACACCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATTGCTTcactgtggctgacagct-gggctctgtttgcagtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccgatatttgaatatttgatgagatgatccaaggggcgtgcttagcacggggttggcatccagGCCGAGTGCACTCCC-------CCCGGCGTCTCCA--GTCACCACCGTCCTCGTTGTCAGCGT--CTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCTGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGGAGGAGCTGAGAGCACACACCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55911521 968 + 60714840 ttgcagtgagctaagatcataccactgccctccagcctgggtgacagagtgaga---ctgtctcaaaaaaaaaaaacaa-----------------GCAAGacaggttctgggacaga------------caggcctgggtccggaccctgctctgtccgactgtggcgagtgacctcaggctcatggccctgtgccctgcttggcctcccccagggatggggagaacaataGCACTGATGGCCAAGGCCGGTTGGGCATTTCCTGGCCCCACCCCCCAGCCCTGTGTGGG----TTTTTTTTTTTT--TTTTTGGTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACTGGTGGGCCTAGGGCTCGGGACTCCAGCTGCCTCACTGCACCCCTGCCATCGCCGCCGCCTCACAGCCCTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGCCTCTGCCTCTTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCGGAAGGGAGGCCAGGGCTGGCCATCATCACTTcactgtggctgacagct-gggctctgtttgcggtttggattggaaccctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcccaatatttgaatatttgatgagatgatccaaggggcgtgcttagcacagggctggcatccagGCCGAGCACACTCCC-------CCCGGCGTCTCCACAGTCACCACTGTGCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102675038 970 - 106955855 ttgcagtgagctaagaccataccactgccctccagcctgggtgacagagtgagact-ctgtctcaaaaaaaaaaaaaaa--------------caaTCAAGACAGGCTCTGGGACAGA------------CAGGCCTGGGTCCAGACCCTGCTCTGTCCAACTGTGGCGAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCTGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGCCGAGGCCGGGTGGGCATTTCCTGGCCCCATGCCCCAGCCCTGTGTGGG----CttttttttttttttttttggtcttttCTGTGACCCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCCCCTTCCTGGAAGGAGGGAGAGTGGATGATAGAACCCCGGACTGGTGGGCCTGGGGCTCAGGGCTCCAGCTGCCTCCCTGCACCCCTGCCATCGCCGCCGCCTCACAGCCGTAGGCATATGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCAC-CCAGGTCTCTGCCTC--CATTTGCCCATCTCACATCGGTCCAGGCACAGGCCGTACACATCACAGGCCCGTAAGGGAGGCCAGGGCTGGC---CATCGCTTCACTgtggctgacagct-gggctctgtttgcagtttggattggaagcctggctccatcacctgctggctgtctccctggccacatgacttgaagccttggtttccacatctgaaaagggggtgcgatgatcgcaccagcctgatatttgagtgtttgatgagatgagccgaggggcgtgcttagcacgggcctggcatccagGCCGAGCGCACTCCG-------CCCGGCGTCTCCACAGTCGTCACTGTCCTCGTCGTCAGTGTGTCTTACTGTCATCCTTACCTGA--CGGCCACTTACCAGCCGGGACATGGCTGTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTGAGAGCACACACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59960774 1005 + 64156825 ttgcag-gggccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCAtaagcaagacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccggcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGGtttttttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacagggctggcatccaggctgagcgcACTCCCCCGCC--GCCAGTGTCTCCACAGTCACCACTGTCCTCCTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54978415 1001 + 59248254 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaagaaaaagaaaaaaacagaaaCATAAGCAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCGTGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCACCCCCCAGGCCTGTGTAGG----tttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCATCCTGGGAGGAGGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCCGCCTCACTGCACTCCTGCCATCGCCACCGCCTCACAGCCCTAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCATAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcacaccagcctgatatttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCCAC--TCCAGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47094419 999 + 51301725 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaaacaaaaaacagaaacataagcAAGACAGGCTCTGGGACAGACAGGCCTGGGTTCAGGCCTGGGTCCAGACCCTGCTGTGTCCGACTGTGGCAAGTGACCTCAGGCTCATGGCCCTGTGCCCTGCCCGGCCTCCCCCAGGGATGGGGAGAACAATAGCACTGATGGACAAGGCCAGGTGGTTGTTTCctggcccca-cccccaggcctgtgtagg-------ttttttttt-tgttttggttttttctgTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTCGCCCCatcctgggaggagggagagcggGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTCGGGGCTCCAGCcgcctcactgcactcctgccATCGCCACCGCCTCACAGCCCGAGGCATGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCTGTaagggaggccagggctggc---tATCGCTGCACTGCGGCTGACAGCT-GGGCTCTGTTTGCAGTCTGGATTGGAACTCTGGCTCCATCACCTGCTGGCTGTCTTTCCGGCCACATGACTTGAAGCCTTGGTTTCCACATCTGAAAAGGGGGTGCAGTGATCACACCAGCCTGATATTTGCATATTTGATGAGATGATCCAAGGGGCATACTTAGCACGGGGCTGGCATCCAGGCTGAGCGCACTcccccccccGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCGTGTCTTACTGTCATCCTtacctgactctgccacttaccagctgggACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACGCCTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46802241 1001 + 50890351 ttgcag-gagccaagatcacaccactgccctctagtctgggcgacagagtgagact-ctgtctcaaaaaaaaaaaaag-aaaaaacagaaaCACAAGCAAGacaggctctgggacagacaggcctgggttcaggcctgggtccagaccctgctgtgtccgactgtggcaagtgacctcaggctcatggccctgtgccctgcccagcctcccccagggatggggagaacaatagcacTGATGGACAAGGCCAGGTGGTTGTTTCCTGGCCCCA-CCCCCAGGCCTGTGTAGG----Gttttttttttt-ttttttggttttttCTGTGACTCTTTAGGTCAGGCACTGCTACTGGAACACA--CCCAGGGAGGCTGGCAGGTTGCTCCATCCTGGGAGGAAGGAGAGCGGGCGATAGAACCCAGGACT-GTGGGCCTGGGGCTTGGGGCTCCAGCCGCCTCACTGCACTCTTGCCATTGCCACCGCCTCACAGCCCTAGGCATGTAGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCA--CCAGGCCTCTGCCTCCTCATTTGCCCATCTCACATCAGTCCAGGCACAGGCCGTAGACATCACAGGCCCATAAGGGAGGGCAGGGCTGGC---CATCGCTgcactgcggctgacagct-gggctctgtttgcagtctggattggaaccctggctccatcacctgctggctgtcttcccggccacatgacttgaagccttggtttccacatctgaaaagggggtgcaatgatcgcaccagcctgatacttgcatatttgatgagatgatccgaggggcatacttagcacggggctggcatccaggctgagcgcACTCCCCCACCCGCCCGGTGTCTCCACAGTCACCACTGTCCTCGTCGTCAGCATGTCTTACTGTCATCCTTACCTGACTCTGCCACTTACCAGCTGGGACGTGGCTCTGTGCCCTGCCCTCATCCCCTCTTCCTGTGAAGTGGGAGCTAGGAGCACACACCTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45376347 897 + 49145316 ttgcagtgagccaagatcaca-cactgcattccagcctgagcgataaagtaagactcccatctcaaaaaaaaaacaaaa-------------aCAGGCaggacaggctctggggcaga------------caggcctgggtccagatcctgctctgtccggttgcagcaagtgacctcaggcTCATGGCCCTGTGCCCTGCCCGGCCTCCCTCGGGGTCGCAGAGAACAACAGCACCGATGGCCAA-------------------GGCCCCA--TTCCTGCCCTGTGTGGG----GTTGTTGTTTTG--------GTCTTTTCTGTGACCCTTTAGGTCAGGCACTGCTATTGGAACACACCCCCAGGGGTGCTGGTGGGTCACCCCATCCTGGGAGAAGGGAGAGTGGGCTTTAGAACCCAGGAGTGGTGGGCCTGAGGCTCGGGGCTCCAGCCACCTCATAA------GGCCATCACCACTGCCTCACAGCCCTAGGC-TGTGGGTTAAACCTGCCCCAGGGAGCCTGGTGTCTTGTCACACAGGGCCTCTGCCGCCTCATCTTCCCATCCCAGATCGGTCCAGGCACAGGATGTAGACATCACAGGCCTGTAAGGGAGGCCAGGGCTggc---catcgcgtcgctgtggctgagagctggggctctgtttgcagtctggatcggaaccctggctccatcacctcccggctgtgtcgctagcgatgtgacttggagccttggtgtccacacctgaaaagggggtgcagtgatcacagcagcccgatgtttgagtattcgatgagatggcccaaagggcacacttagcacggagctggtatccaggctgagtgcACTCCC----------------------------------------------------AGCTGGTGTGCTTACCTGACTCTGCCGCTCACCAGCCCAGACGTGGCTCTGCACCCTGCCCTCATCCCCTCTT-CTGTGAAGAGGGAGCTAAGAGCATACACCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3636438 95 + 145441459 I e canFam3.chr1 19598500 3047 - 122678785 I a score=239302.000000 s hg38.chr19_GL949753v2_alt 100884 94 + 796479 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCAGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT s panTro4.chr19 59034386 94 + 63644993 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCAGGACCCCGGGTAGAG-----CCAGAGGAGGAGCGCGCGCGGTTGCTTTGCTGTTACCTCTGTCTGTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912489 92 + 60714840 AGAGCCCAAGGGTGGAAAGCCC-CCTTCCGGGA-CCAGGGTAGAG-----CCAGAGGAGGAGCGTGCGCGGTC-CTTTGCTATTACCTCTGTCTGTCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676008 94 - 106955855 AGAGCCCACGGGTGGAAAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CCAGAGGAGGAGTGCGCGCGGTTGCTTTGCTATTACCTCTGTCTGTCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961779 94 + 64156825 AGAGCCCATGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979416 94 + 59248254 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095418 94 + 51301725 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCGGGGTAGAG-----CTGGAGGAGAAGTGCCCGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803242 94 + 50890351 AGAGCCCACGGGTGGACAGCCC-CCTTCCGGGACCCAGGGTAGAG-----CTGGAGGAGAAATGCCTGTGGTTGCTTTGCTATTACCTCTATCTGTCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377244 66 + 49145316 AGAGCCTGC-----------------------------AGTGGAG-----CCAGATGAGAAGCACCCACTGTTGGTGTGCAGTTATGTCTGTCTGTCTGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3636533 97 + 145441459 AGAGCCCACGGGTATGAGGCTTACCTCCCAGAGTCTGGGGTATGGCTGCCCTAGATGAGGAGTGACTATTGTAG--TGGCTGTTACCT-TCTCTAGAGGT i mm10.chr7 I 95 C 0 e canFam3.chr1 19598500 3047 - 122678785 I a score=548290.000000 s hg38.chr19_GL949753v2_alt 100978 133 + 796479 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG s panTro4.chr19 59034480 133 + 63644993 CTCACACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912581 133 + 60714840 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTGCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGA----------------------------GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676102 119 - 106955855 CTCATACAGATTCCACCCCCGTTTTCCGTTGCTCCAGGATCTTCGGCGGAAAGCGGCCCGGCTGGTGGCCGCCAAGTGCACACTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCAC------------------------------------------GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59961873 161 + 64156825 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgaggagaggaaggtgagggggggaaggtgagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979510 161 + 59248254 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACGGAGGGGAAGGTGAGGAGGGGAAGGTGAGGGGGGGAAGGTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095512 161 + 51301725 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCAGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgagcgggggaaggtgaaggggggaaggtgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803336 134 + 50890351 CTCACACAGATTCCACCCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCCAAGTGCACGTTGGCAGCCCGTGTGGACAGTTTCCACGAGAGCACggaggggaaggtgag---------------------------gg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377310 133 + 49145316 CTCACACAGATTCCATTCCCGTTTTCCATTGCTCCAGGATCTCCGGCGGAAAGCGGCCCGGCTGGTGGCTGCTAAGTGCACGCTGGCAGCCCGCGTAGACAGTTTCCATGAGAGCACGGAGGGGAAGGTGA----------------------------GG i calJac3.chr22 C 0 C 0 s mm10.chr7 3636630 113 + 145441459 T-----CAGTTTCCTTTCTC-CTTGCCATTGCTCCAGGATCTCCGGCGGAAGGCGGCCCGCCTAGTGGCTGCCAAGTGTACACTGGCAGCTCGTGTGGACAGCTTCCATGAGAGCAC------------------------------------------AG i mm10.chr7 C 0 C 0 s canFam3.chr1 19601547 131 - 122678785 CTCCCATTGACTCTGCCCCC--TTTCTGCTGCCTCAGGATCTCCGGCGGAAAGCGGCTCGGCTGGTGGCTGCCAAGTGCACACTGGCAGCCCGTGTGGACAGCTTCCACGAGAGCACAGAAGGGAAGGTGA----------------------------GG i canFam3.chr1 I 3047 I 930 a score=1194434.000000 s hg38.chr19_GL949753v2_alt 101111 411 + 796479 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGCAGGGAGA-CCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgaacctactggcttcaaacagtgcaggtgtggccgggtgcagtagctcacgcctgtaatcccagcactttgggaggccagggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt s panTro4.chr19 59034613 407 + 63644993 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTC-----CTCTGGGCCTGGGGTGTCTCTGCAGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGAGCACTGTCCTACCAAGGCGGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctaggtctgctgttggaaggtagcatgcacctactggcttaaaacagtgcaggtgtggccgggtgcagtagctcacacctgtaatcccagcactttgggaggccaaggtgggcgggtcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcacgcacctgtaatcccagttactcaggaggctgaggcaggagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55912714 411 + 60714840 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCT-GGTCTGGGGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAG----------------CCCGCCCCAGCGAGCACTGTCCTACCAAGGCCGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGGTCAGGCACCCCCTTCCCCAGTGGG---gtttcctagggctgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcactttgggaggccaaggtgcgtgggttacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccgggtgtggtggcatgcgcctgtaatcccagttactcaggaggctgaggcaggagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676221 411 - 106955855 AGGGAAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTGT-GGCCTGGGGTGTCTCTGCCAGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCGGGCACCGTCCTACCAAGGCGGAGGCAGTGTTTCTGCCC---ACCCTCCCTGGGGTCAGGAACCCCCTTCCCCAGTGGG---gtttcctaggactgctgttggaaggtagcatgaacctactggcttaaaacagtgcaggtgtggccgggtgcggtagctcacgcctgtaatcccagcacttcgggaggccacggtgggcagatcacaaggtcagg-----------------agtttgagaccagcctggtcaacatggtgaaaccctatctc---------t----accaaaattagcccggtgtggtggcacacacctgtaatcccagttactcaggaggctgaggcaggagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962034 422 + 64156825 aggggaaggtgagggggggaaaagggcggCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGTAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagttttggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54979671 412 + 59248254 GGGGGAAGGTGAG----------GGGCGGCCGGGCGTCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGTCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTTCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcataaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47095673 428 + 51301725 aggggaaggtgag----------gggCGGCCGGGCATCTTTTCCTCTGGGCCTGGAGTGTCTCTGCGGGGAGAGCCCTCAGCAGGGAGCCCACCCCAGCAAGCACCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGTG-CCCTTTCCCCAGTGGGTTcattttctagggctgctgtTGGAAAGTAGCACAAACCTACTGGCGTAAAACAGTGcaggtttggccgggcgcggtggctctcgcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacgtacctgtaatcccagttactcaggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803470 412 + 50890351 gggggaaggtgag----------gggcggCCAGGCGTCTTTTCCTCTGGGCCTGGGGTGTCTCTGTGGGGAGAGCCCTCAGCAGGGAG----------------CCCACCCCAGCAAGCACTGTCC-ACCAAGGCAGAGGCAGTGCTTCTGCCC---ACCCTCCCTGGGG-CAGGCG-CCCTTTCCCCAGTGGGttcgtttcctagggctgctgttggaaagtagcacaaacctactggcgtaaaacagtgcaggtttggccgggcgcagtggctctcgcctgtaatcccagcactttggaaggccaaggcaggtggatcacaaggtcagg-----------------agtttgagaccagcctggccaacatggtgaaaccccatctc---------t----accaaaattagccagatgtggtggcacatacctgtaatcccagttactcaggaggctgaggcaggagaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377443 418 + 49145316 AGGGGAAGGAG-G----------GGGCGGCCGGGCGTCCTTTCCTCTGGGCCTGGGGTGTCTGTGCGGGGAGAGCCC-CAGCAGGGAG----------------CTCACCCCAACAAGCACTGTCCTACCAGGGCAGAGGCAGTGTTTCTGCTG---ACCCTCCCTGGGGTCAGGCG-CCCCTTCCCCAGtgtgttcattccctagggctgctataggaaggtagcacaaacctactggcttaaaacagcacaggtttggctgggcaagttggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtcagg-----------------agttcgagaccagcctggccaacatggtgaaaccacgtctctattatagat----acaaaaattagtcaggcatgg-ggtgcgcacctgtaatcccagttactctggaaac--aggcaggagaatc i calJac3.chr22 C 0 C 0 s mm10.chr7 3636743 384 + 145441459 AAGGGAAGGTGAG----------GAGAGGACAGGCATCTGTCCCTG-GTGCTTGGGGTCTTTTCATGGGAAGATGCTACTTCAGAGA-----------------CCTCTTCTGACTAGCA------------GACAGA-----TGTGTCTGTCTGCAACCCCTACTGAGGCCA-----TCACATTCTCAG----------CTCTGTATCAGTTATGACAACTCACTATAGATGGAGTAGCTTCATATA----AAAGTTGGCTAGG------------CCTctttaacatcaatactt-gagagacagaggtgggaagatcattagtttgaggcagtctgggttatataagtttcaggccagactgggctgcatagtgaaatcctgtgtt---------tgaaaagaaaaaaAGCCCAgggctggagatgcggctccatcacttcagttcct--gcatgc--aagcatgagaact i mm10.chr7 C 0 I 1444 e canFam3.chr1 19601678 930 - 122678785 I a score=2579485.000000 s hg38.chr19_GL949753v2_alt 101522 902 + 796479 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagcgagactccatctaa-------aaacaaaaacaaaaa------------acagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcatcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccggcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa s panTro4.chr19 59035020 908 + 63644993 gcttgaacctgggagacggaggttgcagtgaactgagattgcatcattgcactccagcttgggtgacatagggagactccatctaa-------aaacaaaaacaaaaa------caaaaaacagtacaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagtgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcaccctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttt-gttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacgtcccttttgccctgt---------------gattctgggaattagaacatgggcctctttgggCATGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGtaattattcagttaccttctgtcttccttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacccagcctggcacagcgttcaggtgttccgtGTCCC---CTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtgggggctgcagctgtgagtagcacagacaggacccctgccccgtggcgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55913125 917 + 60714840 gcttgaacctgggagacagaggttgcagtgaactgagattgcatcattgcactccagcctgggtgacagagcgagactccatctaa-------aaataaaaacaaaaacaaaaacaaaaaacagcgcaggtttattatctgtggtcctgtaggtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttctagcttctaggggtcactggcaccccttagctcgtggccctccctctgtctgcggagccagccacatagcactctcagacctctctctgactctgcttctgtcttcatatctcggcctctgtttttgttcccctcttctattttaagggcccctgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaaaatccttcttaacctcttcacatcccttttgccctgt---------------gattctgggaattagaacatgggcctccttgggCATGTGTGTGTTGGTGGGGGTGTAATTTGCCTTCCACACCAGGATCTGTCCCCGCTGCAACAGGGGatgttattcaagtaattattcagttatcttctgtctt-cttggtagatgtactcgggagaggag--acgttttctgtcttgtgaactgtcgtttgccaagcacctagcctggcacagcgttcaggtgttcCGTGTCCCCTTCTTCTTCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctggcccgtggcgtggacattcttgtgggggccgggtcaaagagacagtcaacaggtgaaccttgtcctgtgtctagcagtgctaagtcaacaccaagaagaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102676632 924 - 106955855 gcttgaacccgggagacagaggttgcagtgaactgagattgcatcattgcactgcagcctgggtgacagagcaagacaccatctaa-------aaaacaaaacaaaac---------aaaacagtgcaggtttattatctgtggtcctgtaagtcagaagtccaaaatgagtttcactgggctgaagtcagggtgtcagcctggagcgttccttctgggggattcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtctgtggagccagccacatagcaccctcagccctctctctgaccctgcttctgtcttcatatctcggcctctgtttt-tctcccctcctctattttaagggcccttgtggctatactgagcctacccagatggtcccggatggtcttcccagctcacagtccttaaaatccttcttaacctcgtcacatccctgttgccctgtgaagtgacattcacagattctgggaattggaacatggacctccttgggCGTGTGTGTGTTGGTGGGGGCGTAATTTGCCTTCCACACCAGGACCTGCCCCCGCTCCAACAGAGGAtgttactcaagtcattattccgttaccttctgtcttccttggtagaggtactcgggagaggagacacgttttctgtcttgtgaactgtcgtttgcctagcacccagcctggcacagcattcaggtgttctgtGTCCCCTTCTTCTCCTTTCCCTCTCCCCACCTCACCCctggtctgggtgtggggg-tgcagctgtgagtagcacagacgggagtcctgccccgtggtgtggacattcttgttggggccgggtcaaagagacagtcaacaggtgaactctgtcctgcgtctagcagtgctaagtcaacaccaagaagagaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59962456 935 + 64156825 gcttgaaccagcgagccagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttacttcctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgt-gggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54980083 936 + 59248254 acttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaagaaa-aaaacaaaacaaaacaaaat-aaaaaaacagtgcaggtttattatctgtggtcctgtaggtcaggagtctaaaataagtttcactaagttgaagtcagggtgtcagcccggagggttccttctaggggagtcaagggataatccattcccttgtc-tttccagcttctaggggtcactggcaccccttagctcatggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcagatggtccaggatagtcttcccagctcacaatccttaatatccttcttaatctcttcacgtcccttttgccctgtgaggtgacattcagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgtcttccgcaccaggatctgtccccgctgcaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcgtttgccaagcacccagcctggcatggcgttcaaGTGTTCCGTGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCCctggtctgggtgtggggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggtcgaggagacagtcagcaggtgaaatctgtcctgcgtctagcggtgctaagtcaacactaagaagaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47096101 937 + 51301725 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccatctaaaaaaaacaaaacaaaacaaaacaaaat-aaaaaaacagtgcAGGTTTATTATCTGTGGTCCggtaggtcagaagtctaaaatgagTTTCACTGAGTTGAAGTCAGGGTGTCAGCCCGGAGGGTTCCTTCTGGGGGAGTGAAGGGATAATCCATTCCCTTGTC-TTTCCAGCTTCTAGGGGTCACTGGCACCCCTTAGCTCGTGGCCCTCCCTCTGTGTGCGGAGCCAGCTGCATAGCACCCTCAGACCTCTCTCTGACCCTGCTTCTGTC-TCATATCT-GGCCTCTGTTTTTGTTCCCC-CCTCTATTTTAAGGGCCCTTGTGGCTATACTGAGCCTACTCAGATGGTCCAGGATAGTCTTCCCAGCTCACAATCCTTAATATCCTTCTTAATCTCTTCACGTCCCTTTTGCCCTGTGAGGTGATATTCAGAGGTTCTGGGAATTAGAACATGGACCTCCTTGGgcatgtgtgtgttggtgggggtATAATTTGTCTTCCGCACCAGGATCTGTCCCCGCTGCAACAGGGGATGTTATTCAAGTAATTGTTCAGTTACTTTCTGTCTTCCTTGGTAGACGTACTCGGGAGAGGAGACACATTTTCTGTCTTGTGAACTGTCGTTTGCCAAGCACCCAGCCTGGCATGGCGTTCAGGTGTTCCCTGTCCccctcttctcctttccctctccccatctcacCCCTGGTCTGGGTGTGGGGGGTGCAGCTGTGAGTAGCACAGACAGGAGCCCTGCCCCGTGGCAGCGACATTCTTCTTGGGGCCGGGTCGAGGAGACAGTCAACAGGTGAAATCTGTCCTGCGTCTAGCGGTGCTAAGTCAAcaccaagaagaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46803882 928 + 50890351 gcttgaaccagcgaggcagaggttacagtgaactgagattgcaccactgcactccagtctgggtgacagagcgagactccgtctaa-------aaaacaaaacaaaacaaaataaaaaaaacagtgcaggtttattatctgtggtcctgtagatcagaagtccaaaatgagtttcactgagttgaagtcagggtgtcagcccggagggttccttctgggggagtcaagggataatccattcccttgtcttttccagcttctaggggtcactggcaccccttagctcgtggccctccctctgtgtgcggagccagctgcatagcaccctcagagctctctctgaccctgcttctgtc-tcatatct-ggcctctgtttttgttcccc-cctctatgttaagggcccttgtggctatactgagcctactcaggtggtccaggatagtcttcccagctcacaatccttaatatc---cttaatctcttcatgtcccttttgccctgtgaggtgacattgagaggttctgggaattagaacatggacctccttgggCATGTGTGTGTTGGTGGGGGTATAAtttgccttccgcaccaggatctgtccccgctccaacaggggatgttattcaagtaattattcagttactttctgtcttccttggtagacgtactcgggagaggagacacattttctgtcttgtgaactgtcatttgccaagcacccagcctggcatggcgttcaggtgttctgtGTCCCCCTCTTCTCCTTTCCCTCTCCCCATCTCACCcc-ggtctgggtgttgggggtgcagctgtgagtagcacagacaggagccctgccccgtggcagggacattcttgttggggccgggttgaggagacagtcaacaggtgaaatctgtcctgcgtctagcggtgctaagtcaacaccaagaagaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45377861 870 + 49145316 gcttagacccaggaggcagaggttgcagtgagctgagattccactattgcactccagcctaggtgacagagtgagactccatctaa-------a--------------------aaaaaaccagcacaggtttaccatct--------gtaggtcggaagtccaaaatgggtttcattgggctgaagtcagggtgtcagcccagaggcttccttctgggggact-----------------ccttgccttttccagctgctaggggtcgccggcatcccttagctcgtggcccttcttcc-tttgc-gagccagctgcgcggcaccctcagacctatctc--accctgcttctgtcttcagatcttggcctctgtctt----tccc-catctattttaagggcccttgtggctatactgagcctgctcacatggtccaggatagtcttccgagctcacactccttaaactc---cttaacctcttcacgtcccttttgccctg--aggtgacattcacaggttctgggagttagaacacggacctcctggggCATGTGTGTGTTGGTGGGGGCATAGtttgccttccgcaccaggatctgtcccc-ctccaacaggggatactattcaagtaattattcagttcacttctgtc-tccttggtagatgtactcgggagaggagacatgttttctgtcttgtgaactgttgcttgccaagcaccCCGCCTGGCTCGGCAATCAGGTGTTCCATCTCCCC--CTCCTCCTTTCCCTCTCTCCGTCTCACCCCCGGCctgggtgtagggaatgcagctgtgagtagcgcagaca-gagccctgtcccatggcgtggatactctcactggggccgggttg-ggagacagtccacaggggcaatctgtcctgtgcctagtaggactaggtaaacatcaagaagaaaaa i calJac3.chr22 C 0 I 955 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=14287.000000 s hg38.chr19_GL949753v2_alt 102424 7 + 796479 gaaaggg s panTro4.chr19 59035928 5 + 63644993 gaa--gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914042 7 + 60714840 gaaaggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677556 7 - 106955855 gaaaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963391 7 + 64156825 gaaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54981019 7 + 59248254 gaaaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097038 7 + 51301725 gaaaggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46804810 7 + 50890351 gaaaggg i chlSab2.chr6 C 0 I 1004 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I a score=50743.000000 s hg38.chr19_GL949753v2_alt 102431 33 + 796479 ggtggcggt--gaggcagcattaggtgctgattta s panTro4.chr19 59035933 33 + 63644993 ggtggcggt--gaggcagcattaggtgctgattta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914049 33 + 60714840 ggtTGCGGT--GAGGCAACATTAGGTGCTGATTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677563 33 - 106955855 ggttggggt--ggggcgacatcaggtgctgattta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59963398 34 + 64156825 ggttggggt-gggggcgacattaggtgctgattta i rheMac3.chr19 C 0 I 1088 s macFas5.chr19 54981026 34 + 59248254 ggttggggt-gggggcgacattaggtgctgattta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47097045 35 + 51301725 ggttggggtggggggcgACATTAGGTGCTGATTTA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I a score=4687.000000 s hg38.chr19_GL949753v2_alt 102464 6 + 796479 actaag s panTro4.chr19 59035966 6 + 63644993 actaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914082 6 + 60714840 ACTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102677596 6 - 106955855 actggg i nomLeu3.chr10 C 0 I 1118 s macFas5.chr19 54981060 6 + 59248254 cctggg i macFas5.chr19 C 0 I 1349 s papAnu2.chr19 47097080 6 + 51301725 CCTGGG i papAnu2.chr19 C 0 I 1246 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e chlSab2.chr6 46804817 1004 + 50890351 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=6650.000000 s hg38.chr19_GL949753v2_alt 102470 26 + 796479 gCACGTGGATACTCGGGGGGTCCGCT s panTro4.chr19 59035972 26 + 63644993 gCACGTGGATACTCGGGGGGCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914088 26 + 60714840 TCACGTGGATACTCGGGGGGCCCACT i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I e calJac3.chr22 45378731 955 + 49145316 I e nomLeu3.chr10 102677602 1118 - 106955855 I e chlSab2.chr6 46804817 1004 + 50890351 I e papAnu2.chr19 47097086 1246 + 51301725 I e macFas5.chr19 54981066 1349 + 59248254 I e rheMac3.chr19 59963432 1088 + 64156825 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 102496 1 + 796479 C s panTro4.chr19 59035998 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914114 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678720 1 - 106955855 C i nomLeu3.chr10 I 1118 C 0 s rheMac3.chr19 59964520 1 + 64156825 C i rheMac3.chr19 I 1088 C 0 s macFas5.chr19 54982415 1 + 59248254 c i macFas5.chr19 I 1349 C 0 s papAnu2.chr19 47098332 1 + 51301725 C i papAnu2.chr19 I 1246 C 0 s chlSab2.chr6 46805821 1 + 50890351 C i chlSab2.chr6 I 1004 C 0 s calJac3.chr22 45379686 1 + 49145316 C i calJac3.chr22 I 955 C 0 e mm10.chr7 3637127 1444 + 145441459 I e canFam3.chr1 19601678 930 - 122678785 I a score=141690.000000 s hg38.chr19_GL949753v2_alt 102497 46 + 796479 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC s panTro4.chr19 59035999 46 + 63644993 AGAGGAGGCCTGGGTGGGCAGCCCACGCGAGCAGCTGCAGGACCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914115 46 + 60714840 AGAGGAGGCCTGGGTGGGCAGCCCATGTGAGCAGCTGCAGGACCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678721 46 - 106955855 AGAGGAGGCCTGTGTGGGCAGTCCACGTGAGCAGCTGCAGGACCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59964521 46 + 64156825 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982416 46 + 59248254 agaggaGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098333 46 + 51301725 AGAGGAGGTCTGGGTGGGCGGCGCACGTGAGCAGCTGCAGGACCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805822 46 + 50890351 AGAGGAGGCCTGGGTGGGCGGTGCACCTGAGCAGCTGCAGGACCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379687 46 + 49145316 ACAGGAGGCCTGGGTGGGCAGCCCACGTGAGCAGCAGCAGGACCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3638571 43 + 145441459 AGATGTTGGCTGAGGGGACAGTTTACATGGCTGGCCACCG---CTT i mm10.chr7 I 1444 C 0 e canFam3.chr1 19601678 930 - 122678785 I a score=1616979.000000 s hg38.chr19_GL949753v2_alt 102543 416 + 796479 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCCGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----cctc--------ctcaaccccacagccagccagccgccaccgccctctgcctcctgccaccgccCCTCCTCTC-GTCCTGTGGCC s panTro4.chr19 59036045 422 + 63644993 CCCCTCCCCCTTGCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAGAAGCTGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCGCCGCCCACCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCCTTGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914161 416 + 60714840 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCACGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CTCAGAGCGC-----CCTC--------CTCAACCCCACAGGCAGCCAGCCGCCACTGCCCTCTGCCTCCTGTCACCGTCCCTCCTCTC-GTCCTGTGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102678767 416 - 106955855 CCCCTC------GCCCTCCCTAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCATGGGGGTCATGGAGGGGAAAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGGCAGCCGCCACTGCCCTCTGCCTCCTGCCGCCGTCCCTCCTCTC-GTCCTGTGGCC i nomLeu3.chr10 C 0 M 163 s rheMac3.chr19 59964567 415 + 64156825 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTTGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982462 415 + 59248254 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCCCCCCCCGTGAAGCAGGTGAAGCCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGAGGCCC-GGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCAGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCAT-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTCGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACCGCCCTCTGCCTCCTGCCACCGTCCCTCCTCTC-GTCCTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098379 417 + 51301725 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAACGCAAATTTGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCAGTAGGCGTGGGGGTCATGGAGGGGAGAGGCCGGCGTCCTCCTCCCAGCTGACTC-------CCTGGCACCGCCCGCCCACACCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------CTCACCCCCACAGGCAGCCAGCCGCCACcgccctctgcctcctgccaccgtCCCTCCTCTC-GTCCTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46805868 413 + 50890351 CCCCTC------GCCCTCCCCAGGTGGGCTACGAACTGAAGGATGAGATCGAGCGCAAATTCGACAAGTGGCAGGAGCCGCCCCCCGTGAAGCAGGTGAAGCCGCTGCCTGCGCCCCTGGACGGGCAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATAGAGGGGAGAGGCCGGCG---TCCTCCCAGCTGACTC-------CTTGGCACCGCCTGCCCAC-CCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACAGAGATCCGGAAGCAGGCCAACCGGATGAGTTTTGGAGAGGTCAGACT---CCCCCAGCGC-----CCTC--------TTTACCCCCACAGGCAGCCAGCCGCCACCACCCTCTGCCTCCTGCCACTGTCCCTCCTCTC-GTCCTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45379733 423 + 49145316 CCCCTTGCTCTCACCCTCCCTAGGTGGGCTACGAACTCAAGGACGAGATCGAGCGCAAGTTTGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAACCACTGCCTGCGCCCCTGGATGGGCAGCGGAAGAAGCGAGGTGGCCGCAGGTGAGAGCCCCTGGGGGTCCAGTAGGCATGGGGGTCGTGGAGTGGAGGAGCCGGTG---TCCCCCCAGCTGACTC-------CCTGGTACCGCCTGCCCAC-------CCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACCGAGATCCGGAAACAGGCTAACCGCATGAGCTTCGGAGAGGTTAGATG---CCCCTAGCGCTGAAGCCATGAGGAGAACTCACGGCCACAGG----CAGCCGCCGCCGCCCCCTGCCTCCCACCGCCTTCCCTCCTCTCTGCCCTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3638614 405 + 145441459 CTCAAC-------TCCCCCCTAGGTGGGCTACGAACTAAAGGATGAGATTGAGCGCAAATTTGATAAGTGGCAGGAGCCACCACCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTTGATGGGCAGCGGAAGAAGCGAGGGGGCCGAAGGTAAGGAGTTCTGATGGGGCTAGACGTTTGGAAGTGGGGAAGGGAAACAACT-------TCTTCCCAGCCAGCTCCCTATATCCTGTTAACACCCACTTGC------CCTAGGTACCGCAAGATGAAGGAACGGCTAGGACTGACGGAGATCCGGAAGCAGGCCAACCGCATGAGCTTTGGAGAGGTCAGGCTTGATCCACAGTAC-----CAGT--------GGGACCATATTAGG---------GTCTTCTCTCTGCACATCCTGCTGCCATCCCTCCTCCCCACCCTGTAATC i mm10.chr7 C 0 C 0 s canFam3.chr1 19602608 349 - 122678785 CCCCCT------GCCCTCCCCAGGTGGGATATGAGCTGAAGGATGAAATCGAGCGCAAGTTTGACAAATGGCAGGAGCCGCCGCCCGTGAAGCAGGTGAAGCCCCTGCCTGCACCCCTGGACGGGCAGCGCAAGAAGCGAGGTGGCCGCAGGT---AGGCCCTGAGGG-CCAGTGGGGGTGAAG---AGGAGGGGAAGGGGCTTGTGAC-----CCCAGCTGAC-C-------CCTGGCGC------------CCCTCCCCAGGTACCGCAAGATGAAGGAGCGGCTAGGGCTGACCGAGATCCGGAAGCAGGCCAACCGCATGAGCTTCGGAGAGGTCAAA-----GCCTTAGTCT-----GGAT--------GTCCCCACCACA----------------------------------------TTTCTTCTC-GG-CTGAGGCA i canFam3.chr1 I 930 C 0 a score=237876.000000 s hg38.chr19_GL949753v2_alt 102959 126 + 796479 CTGGCTCATGTCTAGGGCGCTGCCCCAGCCTCCTCCC-----CCCCGGCCTCTATTCTCGTTTCCATCCATTCAGCCCCAAAGCGACCCTCGCGGCCCTTGGAGCCTGTGTCTCCGCTGCTTAGAGCCCCC s panTro4.chr19 59036467 131 + 63644993 CTGGCTCATGTCTAGGGCGCTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTCTATTCTCATTTCAATCCATTCAGCCCCAAAGTGACCCTTGCAACCCTCGGAGCCTGTGTCTCCGGTGCTTAGAACCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914577 129 + 60714840 CTGGCTCATGTCTAGGACACTGTCCCAGCCTCCTCCCTCATCCCCCGGCCTC--TTCTCGTGTCCATCCATTCAGCCCCAGAGTGACCCTTGTAACCTGCGGAGCCTGTGTCTCCGGCGCTTAGAGCCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59964982 130 + 64156825 CTGGCTCATGTCTAGGGTGCTGTACCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAG-CCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54982877 131 + 59248254 CTGGCTCATGTCTAGGGTGCTGTACCAGcctcttccctcatcccccagcctctactctcatttccatccattcagcccCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCCGCGCTTAGAGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098796 131 + 51301725 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCATCCCCCAGCCTCTACTCTCATTTCCATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806281 130 + 50890351 CTGGCTCATGTCTAGGGTGCTGTCCCAGCCTCTTCCCTCAT-CCCCAGCCTCTACTCTCATTTCTATCCATTCAGCCCCAAAGTGACCCTTGTAACCCTGGGAGCCTGTGTCTCCTGCGCTTAGAGCCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380156 89 + 49145316 CTGGCTCATGTCTAGGGCACGA--------------------TCCTGGCCTCTACTCTGGTTTCTATCCATTCAGCCCCAAAGTGACCCTTGTCACC----------------------CTCAGAGTCCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3639019 109 + 145441459 TGAGAGCAGATCTGGGG--CTACCCAACCCTCCTCCCTCTT-GTCTAGCCTCTCCTCTTA-----AACCA-CCTTCTCCATGGTGATCTTTGCAGCTCTCAGCTGGCTGGCTTCCCAC------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19602957 86 - 122678785 ----------------------------GCACCTCAC-----CTCCAGCCTC--CCCCCACATCCATGTA-----CCCTGAAGGGACCTATGCAGCATTCAG----TGTTGGCCCTGTCCCCCGACCCCC- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102679183 163 - 106955855 M a score=89498.000000 s hg38.chr19_GL949753v2_alt 103085 27 + 796479 GCGGCTTCCCATCGCCCCGGGCTCCTT s panTro4.chr19 59036598 27 + 63644993 GCAGCTTCCCATCGCCCCAGACTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914706 27 + 60714840 GCAGCTTCCCATTGCCCCAGGCTCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679346 27 - 106955855 GCAGCTTCCCATCGCCCCAGGCTCCTT i nomLeu3.chr10 M 163 C 0 s rheMac3.chr19 59965112 27 + 64156825 GCAGCTTCCCATCGCCCCGGGCTCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983008 27 + 59248254 GCAGCTTCCCATCGCCCCGGGCTCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098927 27 + 51301725 GCAGCTTCCCATCGCCCCAGGCTCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806411 27 + 50890351 GCAGCTTCCCATTGCCCCAGGCTCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380245 27 + 49145316 GCTGCTTCCCATCACCCCAGGCTCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3639128 19 + 145441459 GCAGCT--------CTCCAGGCTGCTT i mm10.chr7 C 0 I 241 s canFam3.chr1 19603043 22 - 122678785 -----ACCCTTTTGTACACACCTCCCT i canFam3.chr1 C 0 C 0 a score=487033.000000 s hg38.chr19_GL949753v2_alt 103112 174 + 796479 GGCCGGTTCCTCCCTGCCCAGAGGCTCCTTAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCCTTGGTCCTGCAGGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGACATCCCCCGACC s panTro4.chr19 59036625 174 + 63644993 GGCCGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCCGCCAGTCTCCTCTGTTACCCCAGCGTCAT-CCCCTTGGTCCTGCAAGACCGAACTCAGAGGCCACCTCATCCTATTAAACCTGTTCTGGTTCCTGGCATCCCCCGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914733 174 + 60714840 GGCCTGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACGGCCGCCCCGTCCCTGGGCCCTGCCAGTCTCCTCTGTTATCCCAGCGTCAT-CCCTTTGGTCCTGCAAGACCGAACTCAGAGGCCACTTCATCCTATTAAACCTCTTCTGGTTCCTGACATCCCCCAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679373 168 - 106955855 TGCCGGT--CTCCCTG-CCAGAGGCTCCGCGGTGACCTGCTGCACTGCCG-CCCGTCCCTGGG-CCTGCCAGTCTCCTCTGTTATCCCAGCATCAT-CCCCTTGGT-CTGCAAGACCCAATTCAGAGGCCATCTCATCCTATGAAACCTATTCTGGTTCCTGACACCCCCCAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965139 173 + 64156825 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCG-CCCGTTCCCGGGCCCCGCCAGTCtcccctgttatcccaacgtcat-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983035 174 + 59248254 GGCTGGTTCCTCCCTGCCCAGAGGCTCCGCAGTGCCCTGCTGCACCGCCGCCCCGTTCCCGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAt-ccccttggtcctgcaagacccaactcagaggccacctcatcctatgaaacctgttctggttccTGACACCCCCCAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47098954 175 + 51301725 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACATCATCCCCCTTGGTCCCGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTGACACCCCCCAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46806438 174 + 50890351 GGCCGGTTCCTCCCTGCCCAGAGGCTCTGCAGTGCCCTGCTGCATGGCCGCCCCGTTCCTGGGCCCCGCCAGTCTCCTCTGTTATCCCAACGTCAT-CCCCTTGGTCCTGCAAGACCCAACTCAGAGGCCACCTCATCCTATGAAACCTGTTCTGGTTCCTCACACCCCCCAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380272 150 + 49145316 GGCCAGTTTCTCC-------------------TGCCCT-CTGCACGGCCCCTCCCTCCGTGAGCCCC----GTCTCCTCCGTTATCCCAGTGTCAT-CCCCTTGGTCCTGCAAGACCCAGCTCAGAGGCCACCTCATCCTGTGGAACCTGTTCTGGTTCCAGACACCCCCCAACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19603065 145 - 122678785 -GTCGGGTTGGATCTGCCCAGGG-------AGGGTCCTTCCTCA-GGCTTCACC----------TCTGCCAGACTC----ATTACCCAAGCATCAT-CCTCATGGTCCTGCAAGAACCAGCTCAAACACCCTCTAGTCA-GCAAGCCCAGTTTTGGTTGTTGACACTGCA----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3639147 241 + 145441459 I a score=4046664.000000 s hg38.chr19_GL949753v2_alt 103286 1248 + 796479 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGAGCAGTGCTGGGACCGGGCCCCTCTCAGGCTCCCCGGCATCCCCCGCGTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACACAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtccccagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggatgagtctcctcatggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGCCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTTAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTA--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAACGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCACGGAG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttctgtcagtgttcccggctctggggatgaagcaacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcgcagacagctcagtaagatgtccagtgtagg s panTro4.chr19 59036799 1248 + 63644993 CACACGAGTAAGGAAGGAATGGCCTCCCAACTCTGAGCTCACAGGGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGTGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCGGAGCAGGTGCCCGTGGGACCGGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCTCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTCGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGccggctctgtcctcagccct-----gagaccttggcaaggccccttgccctctgcccctgtgaagaaggccaggataagtctcctcagggggctgttgtggagggtgtggtg-----acgaggtat-gcggagga-cgtaga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGCACTG-CTTCAGAACCAGGCCCACAGCTGTGTTCAGGGCACCCAGTTCCTCTGTC--GGGCTGTGAGCGGGTT--ACACTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCGAGAAGGTTCCCGGCTAGGCGGGCTTGGATGTCAAGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCGTGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCATCTGCCcagtcagcgggtgtctacgcagcacctgctgagttccatcggtgtccccggctctggggatgaagcgacga--atgag--agacaagtcttaccttcttggagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55914907 1250 + 60714840 CACACAAGTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAGTGCTAGGACCGGGCCCCTCTCAGGCTCTCCAGCATACCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCTGAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGGTGGAGGGGATGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCCTCCCCTTCTCCCTAGATCGAGGAGGATGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGTGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGAACCAGGTGGGGCTGGGGACCAA--GGGACACAAGGTTGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGctggctctgtccctggcccc-----gagaccttggcaaggccccttgccctctgcccctgtgaagcaggccaggatgagtcccctcacggggctgttgtggagggtgtggtg-----acgaggtat-gcagagga-cgtagg-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGCGCTGAGCAGTC--CTCGTGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGTGCCCATTTCCTCTCTCTGGGGCCTTGAGCGGGTT--ACAGTGCTCAGCCTCCAGGCCCTCCAGTTCAAAATGGCCAGGACGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCTGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCGGTGCCTCGGTT----CACCATCCACAGAGCAGGGCCAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-CAGCTCatttgctgagtcagcgggtgtctatgcagcacctactgagttctatcggtgttgccggctctggggatgaagcgatga--atgag--agacaagtcttaccttcatgcagccagt-gggtggccgggcacagacagctcagtaagatgtccagtgtagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102679541 1250 - 106955855 CACACGACTAAGGAAGGAATGGCCTCTCAACTCTGAGCTCACAGAGCAATGCTCGGACCGGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCCCAGGCCTCAGCCGGGCCGAGTGGGTACCTGAGCAGGTGCCCATGGGACCAGCCGGCTGGTGACCGCTGGGCTTCCGGCTGCTGGAGGGGGTGCCTCGGTGG-CTGGAGGGCAGGGCCTGGTCGCTGAACTGCAGGGCGCTTCCCCTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTAAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGGGACCGA--GGGACACAAGGTGGGGGGAGTCCAGATC--------GCAGCCT---CCTTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA-----------------------CTCCCCTGGGCCGGCTCTGTCCCCAACCC------GAGACCTCCGCAAGGCCCCTTGCCCTCTGCCC--GTGAAGCAGGCCAGGATGAGTCCCCTCACGGGACTGTTGGGGAGGGTGTGGTG-----ACGAGGTAC-GCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTTGGCAGAGACgaggggccagcgctgagcagtc--cccatgagcacggacca-ctttagaaccaggcccacagctgtgttcagggcacccagctcctctctgtggggccatgagcgggttacacactgctcagcctccaggccctccagttcaaaatggCCAGGGCGGTTAAGGTAACCTCAGGACCCCATTCGAGAAAGTTCCCGGCTAAGTGGGCGTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGCAGCGTGGAGCATGGCAGTCACCGCATC-GTCAGTGCCTCAGTT----TACCATCCACAGAGCAGGGCGAGCCTGCACCATGGGG--GCGAG-ACAGCAGC-GAGCTCatttcctcagtcaacgggtgtctgtgcagcacctactgagttccatcggtgttctcggctctggggatgaggcgatga--atgagacagccaagtcttagcttcatggagccagt-gggtggccgggcatagacagctcagtaagatgtccagtgtagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59965312 1246 + 64156825 CACACGAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCC-GCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTTGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CCAAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctggggatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54983209 1247 + 59248254 CACACAAGGAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCCAGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCGAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGGCCTGGTCACTGAATTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTTGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGCCCTGGGCCGGCTCTGTCCCCAGCCCC-----AACACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACGGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAAGTTAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCATGAGCACGGACCG-CTTTAGAACCAGGCCCACAGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCTGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTGAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCGAGAAAGTTCCCGGCTAGGTGAGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--CTGAG-ACAGCAGC-GAGCTCatttgctcagtccgcggatgtctgtggagcacctactgagttccatcggtgttcccagctctgggaatgaagcgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtctaatgtagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47099129 1244 + 51301725 CACacgaggaaggaaggaatggccTCTTGACTC--AGCTCACAGAGCAGTGCTAGGACCCGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTGAGCAGGTGCCCGTGGGACCAGCCGGCTGGTGACTGCTGGGCTTCCAGCTGGCCGAGGGGGTGCCTCAGTGG-GTGGAGGGCAGGGCGTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACGCTGCAGGTATGGG-CAGacctgggtggggctggggaccGA----GACACAGGGTGGGGGGAGCCCAGATC--------GCAGCCT---CCCTGTCCTCCCCACAGCGGACCCTGCAGAAGCAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTGTCCTGGGCCGG--CTGTCCCCAGCCCC-----AAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCCGGCCAGGATGAGTCCCCTCACAGGGCTGTCGTGGAGGGCGTGGTG-----ACGAGGTAT-TCAGAGGA-CGTAGA-CAGCTCCTGGCACACAGGAA------GAGGTCAGCAGAGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACGCACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTCTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCAGTTCAAAATGGCCAGGGCGGTTAAGGTAACCTCAGGACCCCACTCAAGAAAGTTCCCGGCTAGGTGGGCTTGGATGTCACGTGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATC-GTCGGAGCCTCGGTT----TACCATCCACAGAGCAGGGCGAGCCTGCA-CATGGGG--GCGAG-ACAGCAGC-GAGCTCATTTGCTCAGTCCGTGGATGTCTGTGGAGCACCTACTGAGTTCCATCGGTGTTCCCAGCTCTGGGGATGAAGCGATGA--ATGAGAGAGACAAGTCTTACCTTCAGGGAGCCAGT-GGGTGGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGT i papAnu2.chr19 C 0 T 39 s chlSab2.chr6 46806612 1238 + 50890351 CACACAAGTAAGGAAGGAATGGCCTCTCGACTC--AGCTCACAGAGCAGTGCTAGGACCTGGCCCCTCTCAGGCTCCCCAGCATCCCCCGCTTGTGGGGGCCCTCAGGCCTCAGCCGGGCCAAGTGGGTACCTAAGCAGGTACCCGTGGGACCAGCCGGCTGGTGACTGCTAGGCTTCCAGCTGGTCAAGGGGGTGCCTCAGTGG-CTGGAGGGCAGGACCTGGTCACTGAACTGCAGGGTGCCTCCCCTTCCTCCTAGATTGAGGAGGACGCCTACCAGGAGGATCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACGCAGGTCAACGAGGCCACCAAGGCGAGGATCTCCAAGACACTGCAGGTATGGGCCAGACCTGGGTGGGGCTGGGGACCGA----GACACAGGGTGGGGGAAGCCCAGATC--------GCAGCCT---CTCTGTCCTCCCCACAGCGGACCCTGCAGAAACAGAGCGTCGTGTACGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACGGCCTCCAGCGTGGCCTTCACCCCACTCCAGGTA----------------------CCTCCCCTGGGCCGGCTCTGTCCCCAGCCCC-----GAGACCTTGGCAAGGCCCCTTGCCCTCTGCCCCTGTGAAGCAGGCCAGGATGAGTCCcctcacggggctgttgtggagggcgtggtg-----acgaggtat-tcagagga-cataga-cagctcctggcacacaggaa------gaggttagcagaGACGAGAGGCCAGTGCTGAGCAGTC--CTCGTGAGCACAGACCG-CTTTAGAACCAGGCCCACGGCTGTGTCCAGGGCATCCAGTTCCTGTCTGTGGGGCCGTGAGCTGGTT--ACACTGCTCAGCCTCCAGGCCTTCCCGTTCAGAATGGCCAGGGCGGTTAAGGTAACCTCAGG-------------AAGTTCCCGGCTAGGTGGGCTTGGATGTCACATGTGGGTCCAGGCCCCAG-CCAGTCAGCAGTGAGTGGCGTGGAGCATGGCAGTCACCGCATT-GTCGGAGCCTCAGTTTACCTACCATCCACAGAGCAGGGCGAGCCTGCA-CGTGGGG--GCGAG-ACAGCAGC-GAGCTCATGTGCtcagtccgcggatgtctgtggagcacctactgacttccatcggtgttcccagctctggggatgaagtgatga--atgagagagacaagtcttaccttcagggagccagt-gggtggccgggcacagacagctcagtaggatgtccaatgtagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45380422 1201 + 49145316 CACATGCATAAGGAA-----GGCCTCTCAACTCTGAGCTCACAGAGCAGCGCCGGGACCCAGCCCCTTTCAGGCTCCCCAGCATCCCCGGCTTGTAGGGGCCCCCAGGCCTCAGCTGGGCCGAGTGGGTACCCGAGCAGGTGCCCATGGGGCCAGCCAGCTGGTGACCGCGGGGCTTCTAGCTGGTGGAGGGGGTGCCTGAGTGG-CTGGAGGGCGGGGTCTGGTCCCTG-ACGGCAGGG-GCTTCCCTTTCCCCCTAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCACCTGGGCAAGTCGGGCAGTGGGCGCGTGCGGCAGACACAGGTCAACGAGGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGTGCC-GACCTGGGTGGGGCCAGGGACCGA--GGGACGCAAGGTAGGGTGAGCCCAGATA--------ACAGCCT---CCCTGTCCTTCCCACAGCGGACCCTGCAGAAGCAGAGCGTGGTATATGGCGGGAAGTCCACCATCCGCGACCGCTCGTCGGGCACGGCCTCCAGCGTGGCTTTCACCCCACTCCAGGTA----------------------CTTGCCCTGGGCCAGCTCTGTCCCCAGCCCC-----AAGATGCTGGCAAGGCCCCTTGCCCTCTGCCCctgtgaa-caggccacaatgagtccccttacagggctgtcacggggggtgtggtg-----a--agacat-gccaaagg-catcgg-cagcccctggcacacagcaagtgctcgaGGTTAGCAGAGACGAGAGGC----GCACAACAGTC--CTCATGAGCGGGGACCG------------------GGGCTACATCCCAGGGACCCTGTTTTTCTCTGTGGGGCCATGAACGGGTT--ACATTGCTCAGCCTCTAGGACCT-CAGTTTGAAATGGCTAGAGTGGTTAAGGTAACCTCAGGACCCCACTCGAAACAGTTCCCAGCTAGGTGGGCTTGGGTGTCACGTGTGGGTCTGGCCCCCAGCCCAGTCAGCAGTGAGTGGCTTGGAGCACGGCAGTCACCGCACC-ATCGGCACCGCGGTT----TGCCATCCACAGAGCAGGGCGAGCCTGCACCGTGGCT--GTGGG-ACAGTGGG-GAGCTCATCTGCTCAGACAGCGG-------------------------CTGTCGGtgctctcggctctgggggtgaagcggtga--atgagagagacaagtcttgccttcctggagcctgt-gggtggctgggcacagacagatcagtaagatgcccagtgtggt i calJac3.chr22 C 0 C 0 s mm10.chr7 3639388 999 + 145441459 CATACTGCTAAGGATG--ATGGACTCT--------GGCCAATAGGGTAG------------GCTCTTATTAGGTCACTTAAT-----------------GCTGCCAGTCC----CCTGGCTGA---------TGAGGTGGTGTCCATGAGACTGGCTGATTG----------GGTTCTCAGGTGAC--------TGCCTCAGGGGACTGGCTGGATGTACCCAGCTTCTTAACCGCAGGTTGCT--CTCGTCTCACCAGATTGAGGAGGATGCCTATCAGGAAGACCTGGGCTTTAGCCTGGGCCACTTGGGCAAGTCAGGCAGTGGGCGTGTGCGGCAGACCCAGGTGAATGAGGCCACCAAGGCCAGGATCTCCAAGACACTGCAGGTATGGATTGGGCCCA--TGAGAATGGGAGGCAGGTGGGATATGGAGGTCAGTGAGCCTGGATC--------CCAGCCT---CCCCTT--TCCCTACAGCGGACCTTACAGAAACAGAGCGTGGTGTATGGTGGGAAGTCAACAATTCGTGACCGCTCCTCAGGGACTGCCTCCAGTGTGGCCTTCACTCCACTCCAGGTA----------------------CC----------------------------------------------ATACCCTTT----TCTACC---------------------AGGCATATGATAAGGCTGCTGTGGAGATC----TG-----TTGAGATATAGCACATGAGCTTAGG-CATCCACAACCACACAGTAA------GTGCCTAACAG------TTGGCCA-----TGACAGTT--GTGACAAACTCAGACCAACTTTGGAACCAGGACTAGGATGCTGCCCACGTGATCCAGATACTCTCT---------------------GAACTTCCTAGTCTT---------TGTTTAAAAATAGTCCCG-TAGTCAGGATGCCATCAGG---------------------------GTGGGCTTGAGTATCACAG--------------CAG-CCCAGCGGCACTGAGCAGTGTGGAGCAGAATGG------------------CCTCAGGT----TACTTACCACAGAGATAGGCAAGTACGCCCCATAATGTCTCAAG-GAACCAAA-GAGCTCCCTAGCTTG--CCacaagtgcctactgagcacctgc------ccacca-tgttccaggctttgggcatagag--------acaaaagagacaagctttgcttttgtgggg--aga-aggttggggagcacagatgattgagtctagtacacaatgtatt i mm10.chr7 I 241 C 0 s canFam3.chr1 19603210 1094 - 122678785 TACATGAACACTCACAGCTT---CCCTCAACTGTCAGCTCAGGGAGCCGTAATAGGACTGGACTCCTCACTGGGCCCC--------------------------------------------AGCAGGCACCTGAATCGG------------------GTCAGTGCCTG--GGGCATCCGGCTGATGAAAG----------ATGG-CT----------------------AACTCTTGGTTACCTTCCCCTCCCACCAGATCGAGGAAGACGCCTACCAAGAGGACCTGGGCTTCAGCCTGGGCCATCTGGGCAAATCAGGCAGCGGGCGGGTACGGCAGACACAGGTGAACGAGGCCACCAAAGCCAGGATCTCTAAGACACTGCAGGTACAGGCGGGGCCTGAGTGGGCCTGGGAGTCTG--GGAGCTCCAG--CAGGAGAGCCCAAGCCAAGCCCAAACATCCTGTCCCCTCCCCTCCACACAGCGGACCCTGCAGAAGCAGAGTGTCGTGTATGGCGGGAAGTCCACCATCCGTGACCGCTCCTCGGGGACTGCTTCCAGTGTGGCTTTCACCCCTTTGCAGGTACTGTGCACCTgagtcaggaggcccagttctgggcaggctctactcccagctttctgagtggacctgggcaagcccctt-----------------------------------cctctcgcagggcTGTTGTGGACAGCCTTGTGTATCAGTGAAGCCC-CTGAAAGG-TACAGCTCAGTTCCTGGTGCTCAGGCT------AGTGGGAGCAGAAGGGAAAAG-------------GTCTGCCTGCAAGTGCAGGCTGGCTTTAGGATCGGGC------TGGGACTAGGGGTGACTACTGATTCCCCA--TGACCTCAAGTGGGCT----------CAGCTCCT---CCCTGAGGTGCTAAGTGGCTGGGAC---------AACCTCAGGGCTCCACGGAAGAAAACTCAAAGGTAG------CTGGCTGGGAAGCAGAGGTCCCAGCC-CAG-CCACTCA----TGCACAGGACAGAGC--------CTCTGCATCTGTCCATTTCTCAGCC----TAC---CCACAGA-TAGCGCCAGCACGCCCCATAGCA--TCGAGTAGAATAACTGAGTTCATTGGCAACAtcagcaagggtgtactgagcaccta--agtttcaggtgctgttgcaggcactggggatagagccacaagcacaagacag-caagccttgccctcagggagcttgtggggtggcaggggtcaga--------taagatatggagcctggt i canFam3.chr1 C 0 C 0 a score=6561.000000 s hg38.chr19_GL949753v2_alt 104534 9 + 796479 agaaggcag s panTro4.chr19 59038047 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916157 9 + 60714840 aaaaggcgc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45381623 9 + 49145316 aaaaggcag i calJac3.chr22 C 0 C 0 s mm10.chr7 3640387 9 + 145441459 agaagacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19604304 9 - 122678785 ggaaagtgg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=2755.000000 s hg38.chr19_GL949753v2_alt 104543 8 + 796479 -aaatgcca s panTro4.chr19 59038056 8 + 63644993 -aaatgcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45381632 8 + 49145316 -aaatacca i calJac3.chr22 C 0 C 0 s mm10.chr7 3640396 8 + 145441459 -aggtgcca i mm10.chr7 C 0 C 0 s canFam3.chr1 19604313 8 - 122678785 aaagtgca- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100373 39 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=3000.000000 s hg38.chr19_GL949753v2_alt 104551 2 + 796479 GG s panTro4.chr19 59038064 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 2 + 51301725 GG i papAnu2.chr19 T 39 C 0 s calJac3.chr22 45381640 2 + 49145316 gg i calJac3.chr22 C 0 I 489 s mm10.chr7 3640404 2 + 145441459 gg i mm10.chr7 C 0 I 5 s canFam3.chr1 19604321 2 - 122678785 gg i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=5928.000000 s hg38.chr19_GL949753v2_alt 104553 14 + 796479 CCGGGCGCAGACAG s panTro4.chr19 59038066 14 + 63644993 CCGGGCGCAGACAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 14 + 51301725 CCGGGCACAGACAG i papAnu2.chr19 C 0 C 0 s mm10.chr7 3640411 14 + 145441459 gcaggcgtggacgg i mm10.chr7 I 5 I 50 s canFam3.chr1 19604323 8 - 122678785 ------gaagaaag i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9882.000000 s hg38.chr19_GL949753v2_alt 104567 42 + 796479 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG s panTro4.chr19 59038080 42 + 63644993 CTCAGTAAGATGTCCAGTGTAGGAGAAGGCA-GAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100350 42 + 51301725 CTCAGTAGGATGTCCAATGTAGTAGAAGGCG-GAAATgtcagg i papAnu2.chr19 C 0 T 56 s canFam3.chr1 19604331 23 - 122678785 --------------------gggagagggagtgaggcatcggg i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14949.000000 s hg38.chr19_GL949753v2_alt 104609 54 + 796479 ------CTGGGCGCAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA s panTro4.chr19 59038122 54 + 63644993 ------CCGGGCACAGACAGCTCAGTAAGATGTCCAG-------TGTAGGAGAAGGCAGAAA---TGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 54 + 51301725 ------CCGGGCACAGACAGCTCAGTAGGATGTCCAA-------TGTAGTAGAAGGCGGAAA---Tgtca i papAnu2.chr19 T 56 T 56 s canFam3.chr1 19604354 70 - 122678785 ttggacccgcccagggaggcctcagcaagaaggtcagaattacctgtggaagatactgggaatggtgcca i canFam3.chr1 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=9107.000000 s hg38.chr19_GL949753v2_alt 104663 30 + 796479 GGCCGGGCGCAGACAGCTCAGTAAGATGTC s panTro4.chr19 59038176 30 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGCC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 30 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTC i papAnu2.chr19 T 56 C 0 s canFam3.chr1 19604424 30 - 122678785 gCCAGTGTGGAGCCCCCACAGCTGGACGCC i canFam3.chr1 C 0 I 288 e mm10.chr7 3640425 50 + 145441459 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=6244.000000 s hg38.chr19_GL949753v2_alt 104693 26 + 796479 CAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038206 26 + 63644993 CAGTGTAGTAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100364 26 + 51301725 CAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 C 0 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=14450.000000 s hg38.chr19_GL949753v2_alt 104719 56 + 796479 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA s panTro4.chr19 59038232 56 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCA i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 56 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtca i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=15050.000000 s hg38.chr19_GL949753v2_alt 104775 58 + 796479 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG s panTro4.chr19 59038288 58 + 63644993 GGCCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100334 58 + 51301725 GGCCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 56 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=13935.000000 s hg38.chr19_GL949753v2_alt 104833 56 + 796479 CTGGGCGCAGACAGCTCAGTAAGATGCCCAGTGTAGTAGAAGGCAGAAATGCCAgg s panTro4.chr19 59038346 56 + 63644993 CCGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAgg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47100336 56 + 51301725 CCGGGCACAGACAGCTCAGTAGGATGTCCAATGTAGTAGAAGGCGGAAATgtcagg i papAnu2.chr19 T 56 T 19 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=26492.000000 s hg38.chr19_GL949753v2_alt 104889 292 + 796479 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagccagactctgtctcaaaaaaaaaaaaa s panTro4.chr19 59038402 292 + 63644993 ccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaacttagccgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgtggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacagggccagactccatctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I e nomLeu3.chr10 102680791 0 - 106955855 C e chlSab2.chr6 46807850 0 + 50890351 C e papAnu2.chr19 47100392 19 + 51301725 T e macFas5.chr19 54984456 0 + 59248254 C e rheMac3.chr19 59966558 0 + 64156825 C a score=17014.000000 s hg38.chr19_GL949753v2_alt 105181 9 + 796479 agaaggcag s panTro4.chr19 59038694 9 + 63644993 agaaggcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102680791 9 - 106955855 agaaggcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966558 9 + 64156825 agaaggcgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984456 9 + 59248254 agaaggcgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100373 9 + 51301725 AGAAGGCGG i papAnu2.chr19 T 19 C 0 s chlSab2.chr6 46807850 9 + 50890351 agaaggcgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e ponAbe2.chr19 55916166 0 + 60714840 C e calJac3.chr22 45381642 489 + 49145316 I a score=516860.000000 s hg38.chr19_GL949753v2_alt 105190 211 + 796479 aaaTGCCagggaggggaggaggtggaaggtaggaggtgggaCAGGGGAGGCTCTCGTTTCGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCaggactgaaaagaacgcacaggaagcacttggcactgggctcaccattagagcccaatgactgggt s panTro4.chr19 59038703 211 + 63644993 aaaTGCCAGGGAGGGGAGGAGGTGGAAGGTAGGAGGTGGGACAGGGGAGGCTCTTGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAAAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAACGCACAGGAAGCACTTGGCACTGGGCTCACCATTAGAGCCCAATGACTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916166 211 + 60714840 aaatgccagggaggggaggaggtggaaggtagggggtgggacaggggagactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTATGCCTTTCCAAGCCTCCCCTCCTCCATCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTTACCATTAGAGCCCGATGACTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102680800 210 - 106955855 aaatgccagggagggga-gaggtggaaggtaggaggtgggacaggggaggctctcgttttggagcagccagggagggcctctttgagaagatgaGGCCGGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCCACCATGAGGTGCTCAGGACTGAAAAGAATGCGCAGGAAGCACTTCGCACTGGGCTCACCATCAGAGCCCGATGACTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966567 209 + 64156825 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcgttttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCCCCCCTCCTCCGCCATGAGGTGCTCGGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTAGGCTCACCACTGGAGCCCGATGACTGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984465 209 + 59248254 aaatgccagggaggggaggaggtgggaggtaggaggtgggac--gggggactctcattttggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCCGTGCCTTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCAATGACTGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100382 209 + 51301725 AAATgtcagggaggggaggaggtgggaggtaggaggtgggac--ggggagCTCTCGTTTTGGAGCAGCCAGGGAGGGCCTCTTTGAGAAGATGAGGCCAGTGGCTGTGCCTTTCCAAGCCTCCCCTCCTCTGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46807859 209 + 50890351 aaatgccagggaggggaggaggtgggaggcaggaggtgggac--ggggggctctcgttctggagcagccagggagggcctctttgagaagatgaGGCCAGTGGCTGTGCCCTTCCAAGCCTCCCCTCCTCCGCCATGAGGTGCTCAGGACTGAAAAGAATGCACAGGAAGCACTTGGCACTGGGCTCACCACTGGAGCCCGATGACTGGGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I e calJac3.chr22 45381642 489 + 49145316 I a score=241281.000000 s hg38.chr19_GL949753v2_alt 105401 85 + 796479 cctgttatt--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC s panTro4.chr19 59038914 85 + 63644993 CCTGTTACT--------ATTTTTAGAGACGGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916377 85 + 60714840 CCTGTTATT--------ATTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCGGCCAGGTGTTGGCTCCCATTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681010 83 - 106955855 CCTGTTAGT--------ATTTTTAGAGAC--GGGCTCACTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966776 87 + 64156825 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984674 87 + 59248254 CCTGTTATT------TTTTTTTTAGAGACAGGGGCTCGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCGCCCATCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100591 93 + 51301725 cctgttatttatttattttttttagagacaggggcttgctctgtt------gccttgAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808068 89 + 50890351 CCTGTTATT----TTTTTTTTTTAGAGACAGGGGCTTGCTCTGTT------GCCTTGAAAATATTTAGGAAGTGCCAGCCAGGTGTTGGCTCCCATCGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382131 94 + 49145316 ccTGttatt-----attttctttagagacagagtctcgctctgttgcccaggcCTTGAAAATATTTAGGAAGTTCCAGCCAGGTGCCGGCGTCTATCGC i calJac3.chr22 I 489 C 0 e mm10.chr7 3640425 50 + 145441459 I e canFam3.chr1 19604454 288 - 122678785 I a score=302873.000000 s hg38.chr19_GL949753v2_alt 105486 92 + 796479 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGtgctaggacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa s panTro4.chr19 59038999 92 + 63644993 TG-CCACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttccttatgcagaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916462 91 + 60714840 TG--CACTATGATCGTCAGTGGTGTTGGTGTGATTTGTGCTAGgacctcgggccagccatgtcccccagggactcagtttcctcatgcagaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681093 93 - 106955855 TGGCCACTGTGATCGTCAGTGGTGTTGGTGTGATCTGCGCTGGGACCTCCGGCCAGCCATGTCCCCCAGGGACTCAGTTTCTGCATGCAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966863 93 + 64156825 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984761 93 + 59248254 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGtgctgggacctcgggccagccacatcccccagggactcagtttcctcatgcagaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100684 93 + 51301725 TGGCCACTGTGATCGTCGGTGGTGTTGGTGTGATTTGTGCTGGGACCTCGGGCCAGCCACGTCCCCcagggactcagtttcctcatgcaGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808157 93 + 50890351 TGGCCACTGTGATTGTCGGTGGTGGTGGTGTGATTTGTGCtgggacctcgggccagccacgtcccccagggactcagtttcctcatgcagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382225 93 + 49145316 TGGACACTGTGATCATCAGTAGTGTTGGTGTGATTTGTGCtgggacctccagccagccacatcccccagagactcagtttcctcatccagaaa i calJac3.chr22 C 0 C 0 s mm10.chr7 3640475 87 + 145441459 tg-ccagcattgtcatcactgtcatgggtgggattt--gcaggaaaCT--GGCTGGCCATATCCCTCTGGGATTCAGTTTCCTTATCCAG-AA i mm10.chr7 I 50 C 0 e canFam3.chr1 19604454 288 - 122678785 I a score=3417376.000000 s hg38.chr19_GL949753v2_alt 105578 1025 + 796479 ctgggcaggattggctgtcctcaagcattggttgtttttagca-cccctgaggaacttcgtacaaatccaggcgccctggttcctccccaccct---ctccctctagacccactgagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-AGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGA---TTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAGCCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCGCAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcacagaaagcactta s panTro4.chr19 59039091 1028 + 63644993 cggggcaggattggctgtcctcaagcattgg-tgtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCA-CCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTTATGTCTACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCC-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGTCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTT-----TTTTAACTGAGAAAGGAGATACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTGTCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCCGGGGCAACTAGAAGAATCAGAGCTGTGGAGCTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCGCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCA-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCCTACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgcgcagaaagcactta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55916553 1035 + 60714840 cggcgcaggattggctgtcctcaagcattggtggtttttagcaccccctgaggaacttcatacaaatctaggcgccctggttcctccccaccct---ctccctccagacccactgagtcagaatctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTGCCATGGGGAAGGGCCTGGGGCGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATCC-----------TCTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCAGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATTG--------GGTTCTGGCAGGGAGAA----------CCTACCCTGCCACCGGCCCCAGTGCTGAGACTGCCTAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGATCACCG---CCCGGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGAAACTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTGTGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGTGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAAGCCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCACAGATCTCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCAGGTG----CCCAGGAC--TGgaaagaatgtgcagaaagcactta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102681186 1027 - 106955855 CTGGGCAGGATTGGCTgtcctcaagcattggttgtttttagcaccccctgaagaacttcatacaaatctaggcaccctggttcctccctacc-----ttccctccagacccatggagtcagaatctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCACGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTTTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCTAACCCATCATC-------------CTCTCCCTCACCTGCCCAGGGCTTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCATGCGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGTCT-AGTCCTTCTGAAG-GGCT-GGGATCG--------GGTTCTGGCAGTGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGGACTGCCCAGGGAGGAGGCCTTGGAAG-AGATGGGCCCAGCCTCCCCCAGGACCGAGATCACTG---CCCAGTAT---GGGCTAGAGCAGGTCTTCATCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTG--AAGAGTACAATTAAAAGG-ACATTATCAAGGTCTGTCCTTGGAGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTTGGCCCTCGGGTCCAAGCGGTGTCTAGGCCCACTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAGACCC------TCTCC--------AACCCCCTGGAGAACCTCAGTCACTTTGATAGCA--AA-------------TTATGTGGCTGCCG-ACGGCCGCAGA--TCAGCGCAGGCCGACCGGGATTGCTGT-CCACCTCAGGCCAGCCTCCTCACCTTTCCAAGCCTCCACACCTA------CGCCCACGTG----CCCAGGAC--TGCAAAGAACGCACAGAAAGCACTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59966956 1040 + 64156825 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggcgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGAGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCCTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCGCACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54984854 1040 + 59248254 ctgggcaggattggctgttctcaagcgtcggttgtttttagca-cccctgaggaacttcatacaaatctaggtgccctggttcctccccagcct---cttccccgagacccactgagtcagaacctcccaagac--------agggcAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATTGGGGCTGGCGGTTCTGGCAGGGAGAA----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGCTCCAGGCGGTGTCTAGGCGCGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGTCGTGGACAACCTCAGTCACTTCGATAGCA--AA-------------CGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAGCCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCCAGGGG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47100777 1037 + 51301725 CTGGGCAGGATTGGCTGTTCTCAAGCGTCGGTTGTTTTTAGCA-CCCCCGAGGAACTTCGTACAAATCTAGGCGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCATGCCCACCCAAGGCCTGAGTACCACGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAACCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCGCAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCTAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAGGGACACAGAGGCCC-AGTCCTTCTGAAG-GGCT-GGGATGGGGGCTGGGGGTTCTGACAGGGAGAG----------CCTGCCCTGCCACCGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCGGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATgccttgtctgttttattttaactgaGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATGTGTTCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGTGGTGTCTAGGCGTGCTCCCTTCCCCGTTACTTTCTCGTCATGGGATCCCAGAAGGAAAAA-CCC------TCTCC--------AGTGCCCTGGACAACCT--GTCACTTCGATAG-A--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGCGCAGGCCAAGCGGGATTGCTCTGGCACCTCAGGCCAGCCACCTCGCCTTTCCAAGCCTCCACACCTA------CGCCTAGGAG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46808250 1041 + 50890351 ctgggcaggattggctgttctcaagcgtcGGTTGTTTTTAGCA-CCCCTGAGCAACTTCGTACAAATCTAGGTGCCCTGGTTCCTCCCCAGCCT---CTCCCCCGAGACCCACTGAGTCAGAACCTCCCAAGAC--------AGGGCAACTCCAGGGACAGGCAAACTGTCTCACGCCCACCCAAGGCCTGAGTACCATGGGGAAGGGCCTGGGGGGCTCTGATGGGTCACAGTT---------------GGGGCCT---TCTCCTCACCCAGCCCACCATCC-----------TGTCTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAGGCGGCAGAGAAGAAGGTGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCCACCTGAATGACTGCGTGTGTCCGAGGTGGCTTCCCACTGAAGGGACACAGAGGCCCAAGTCCTTCTGAAG-GACT-GGGATCGGGGCTGGGGGTTCTGGCAGGGAGAA----------CCTGTCCTACCACTGGCCCCAGTGCTGGG-CTCCCCAGGGAGGAGGCCTTGGAAG-AGCCCAGCCTGGCCTCCCCCAGGACCGAGGTCACTG---CCTGGTGT---GGGCTAGAGCCGGTCTTCATCATGCCTTGTCTGTTTTATTTTAACTGAGAAAGGAGATGCTTTTTTGAAAAGAGTACAATTAAAAGG-ACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAAGAGTCAGAGCTATGGAGTTTT--GAGAAAAGAGCTT-TCCCTCGGGTCCAAGCGGTGTCTAGGCGCACTCCCTTCCCCGTTACTTTCTCGTCGTGGGATCCCAGAAGGAAAAA-GCC------TCTCC--------AGTGCCCTGGACAACCTCAGTCACTTTGATAGCA--AA-------------TGATGTGGCTGCCG-ACAGCCGCAGAGCTCAGTGCAGGCCAGCCGGGATTGCTGCGGCACCTCAGGCCAGCCACCTCGCCTTTGCAAGTCTCCACACCTA------CGCCTAGGTG----CCCAGGAC--TGGAAAAAATGCACAGAAAGCACTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45382318 991 + 49145316 ctgagcaggattggCTGTCCTCAGGCACTGG-TGTTTttagcagcccctggggaacttgttaaaaacctaggtgccctggtttctccccaccct---ctccccccagacccactgaggcagaatcttccaaggc--------agggcGACTCCAGGGACTGGCAAACTGTCCCATGCCCACCCAAGGCCTGAGTACCACGGGGAAAGGCCTGGGGGGCTCTGGCGTGT--CAGTT---------------GGGGCCT---TCTCCTTGCCCAACACATCATCC-----------TCTCTCCCTCACCTGCCTAGGGCCTGGAGATTGTGAACCCACAGGCCGCGGAGAAGAAGGTGGCTGAGGCCAATCAGAAGTATTTCTCCAGCATGGCAGAGTTCCTCAAGGTCAAGGGCGAGAAGAGTGGCCTCATGTCTACCTGAATGATAGCGTGTGCCCAACGTGGCTTCCCACTGAAGGGACGTTGAAGTCC-AGGCCTTCTGAAG-GGCT-GGGATGGGGGTTAGGGGTTGTGGCAGGGAGAG----------CCTTCCCTGCCGCCCA-CCCGGTGCTCGA-CTGCCCAGGGAGG-GGCCTCGGAAGAAGCCTGGCCCGGCCTCCTCCAGGACGGAGCTCACCG---CCCTGGAT---GGGTTAGAGCAGGTCT---TCATGCCTTGTCTTTTTTATTTTAACTGAGAAAGGAGATACTTTTTTGAAGAGAGTGCAATTAAAAAGCACATTATCAAGATCTGTCCTTGGGGAGTGATCATTTTTCAAACAGCTGGGGCAACTAGAATAGTCAGAGCTTCGGAGTTTG--GGGAAAAGAGCTTCGCCTCCGG----------------GGCTCACTCCCTCCCCTGTTCCTTTCTCA------------------------------------CC--------AACCCCCTGGAGAACCTCAGTCGCTTTGATAGCA--GA-------------CGGTGTGGCAGCCG-ACACCTGAAGATCTCAGCGCAGGCTGACCAAGGTTGCGCTGGCACCTCAGGCCGGTTGCCTCGCCTTTCCGAGCCTCCACAGCTA------CGCCCAGGCG----CCCAGGGC--TGgaaagaacgcgcagaaagcactta i calJac3.chr22 C 0 C 0 s mm10.chr7 3640562 964 + 145441459 CCAGGCAGGAGTGG------------------TGATTTTAACATCACCTGAGGAGATTAACA-----------GTCCTGACATCT----AAGAC---CTACCCCAACACCCACTGTGTCAAAAATCTCCCAAAC------TGAGGGAGACTTCAGGGACT-GTAAATGGTTCCATGTCCA--CAAG------------------AGTGTCTGGGAGACTCTGACATGTC-TGGTTCTCAT-CTAG--AGGGAGGCCTGAGCTTCCCAACTTCACCTGTCACC-------------CTCTTCCTTTCCAACCCAGGGTCTAGAGATTGTGAACCCACAAGCAGCCGAGAAGAAGGTGGCAGAGGCCAACCAGAAGTATTTCTCTAGCATGGCCGAGTTCCTCAAGGTCAAGGGTGAGAAAAGTGGCACCATGTCTACCTGAAGGA--GCCCGCACTCCAGGTGACCATCCACTGAAAGGACATAAAGGACT-GGAGCTTCTGAAGTGACA-GATATCCAGCCAGGAAGTTGTGGTGTGGTGGAGGCAGCCTTCCATGCTTTGCCTTTGGCCCAAGGCCATAG-CATCCAAGAAAAAGGAT----GAAG-AACCTTAGCCTGCCTCCCCCAGCATCCATGCTGCTGCTTCCCTAAAC---GGGCAGAA--AGGTCTTCCTCACA-CTCAGCTTTTTTACTTACAGGGGGAAAGGCAGTGCTTTTATAGAACGAGTACAATTAAATGT-GTAGTGTCGGGCTCTGAACAGAGGGTGTGAGTGATTATGAAA---------GAACCAAAGGACTCAGAGCTGTGGGGCTTCCAGTGTGAGCAGCAT-------GGACCCA----------------GCTCTCTTCTGC-------TCTTATCCTGGAATCT----AAGAAAAA-CCCTGTCTATCTCT--------AACACCATCACCTGCCCCA-------TGAGAACATCAG-------------CATCATGGCCACCACAAAACTCCAGGACCCAACAAGACCCA--CAGGGTTGTTGT---CCCTCAGGCTAGACACCTTGGTCCAAGAAACATCCACACAAAATGAAGCACGTAAAAG----CC-----T--TGGAAAGTGTGTACAGAAAGCACCCA i mm10.chr7 C 0 I 2427 s canFam3.chr1 19604742 1028 - 122678785 ctgagccacctgggctgccc---AACATTGA-TGCTTttaaaattgcttagagaacttgataaaaattcagatgcccaggt-cctccccaCTCTTCCCTCTTCCCAGAGCCAC--AGTTAGAATCTCCCCAGGTTTGGGGTGGGGGCAA-TTTGGTAATTGGAAAACTGTTCTAT---CACCTGGAGCCCG-GAACCATTGAAAAGGGCCT------CCCCGACATGTCACAATTCTCTTACTGGGTAAGGGGGCCT---TGTCAGGGGCCAGCCCATCTCCCCACCCCATCATTACCTCATTCACCTGCCCAGGGCCTAGAGATTGTGAACCCACAAGCAGCTGAGAAGAAGGTGGCTGAAGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGGGCGAGAAAAGCGGCATCATGTCCACCTGAGGGGC----TGTACCCTGGGTGGCTGCCC-CTGAAGCTACAC--AGGCCC-TGCCCTTCTGAAG-GGATCAGGATCA--------GGATAGGGCTGGGAGGT----------TCTGTCCT-----CAG-CCCAGTGCCAGGACTGTCCAGGAA---GACTCAGGAGG-AGACC-------CAGTCCCCACGCACGAGATCGCTC---CCTATTGCAGGGGGGCAGAGCCAGTCTTCATCATGCCTCACCTT-----TTTTAACTAGGAAGGAAGATACTTT--TGGAAAAAGTACGATTAAAAAGCACATTATCAAGTTCCGTTCCTGGGGAGTGATCATTTGTCAAACACATGCG-TGACTGGAGGAGTCAGAGCTGTGCGGGTTTGGGGGCACAGAGCTT-------------------------GGGCCCTTCCCTGGCCTTTCACTTCCCTGTGATGGACCCCAGGAAGAGAAAAGCCT------TCTCTATGTCCAAACCTCCTTGGAGAACGTAAGT---TCTGACACTC--AAGTTCTGACACTTCTGATGTGGCTACTG-AAAGCCCTGGCTTTGAAAACTTGCCAACCTGGGTGGCTGT--GATGTCAGGGGAGTGGCCATGCCTTTCCAGGCCTCCACCCTGA------ACACTACGGGGTCACCCATGACCATGTGAGACATGCTCGGGAGGTGCTTA i canFam3.chr1 I 288 C 0 a score=58637.000000 s hg38.chr19_GL949753v2_alt 106603 28 + 796479 gcatgggacttgccatcagcgccctata s panTro4.chr19 59040119 28 + 63644993 gcatgggacttgccatcagcgccctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917588 28 + 60714840 gcatgggacttgccatcagcgctttata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682213 28 - 106955855 GCATGGGACTcgccatcagcgcccaata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59967996 22 + 64156825 GCATG------GCCATCAGCGCCCAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985894 22 + 59248254 GCATG------GCCATCAGCGCCCAATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101814 22 + 51301725 GCATG------GCCATCAGCGCCCAATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809291 22 + 50890351 GCATG------GCCATCAGCGCCCAATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383309 27 + 49145316 gcacagggctcg-cgtcagcacccaata i calJac3.chr22 C 0 C 0 s canFam3.chr1 19605770 28 - 122678785 GTGTTGGGCTCCCCGACAGGGTCCAGTA i canFam3.chr1 C 0 I 94 e mm10.chr7 3641526 2427 + 145441459 I a score=444647.000000 s hg38.chr19_GL949753v2_alt 106631 184 + 796479 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactaaagcctcaaactcctgg------gctgggattacaggcatgaaccagcacagctggcctcctggttaatttaaa----------tttttt-ttttttttctgaggtggagtctcgct s panTro4.chr19 59040147 185 + 63644993 accaggtcctgttatGATTGGG--ttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatga-agctcactacagcctcaaactcctgg------gctgggattacaggcgtgaaccagcacagctggcctcctggttaatttaca---t------tttttt-ttttttttctgaggtggagtctcgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917616 190 + 60714840 accaggtcctgttattACTGGGttttttttagagacagggtctctgttgcccaggttggagtacagtgatgcgatca-agctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccactgcaactggcctcctggttaatttaaatttt------tttttt-ttttttttctgaggtggagtctcact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682241 186 - 106955855 accaggtcttgttagtgttgggttttttttagagacggggtctctgttgcccaggttggagtacagtgatgcgatcatagctcgctacagcctcaaactcctgg------gctaggattacaggcatgaaccggcacacctggcctcctggttaatttaa-----------tttttt-tttttttcctgaggtggagtctggct i nomLeu3.chr10 C 0 I 3 s rheMac3.chr19 59968018 193 + 64156825 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctGGGATTACAGGCACGAAGCTCCACAGCTGGCCTCCTGGTTAATGTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54985916 193 + 59248254 ACCAGGTCCTGTTGTTACTGGt-tttttccagagacggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaa---ctgg------gctgggattacaggcatgaagcaccacagctggccTCCTGGTTAATTTAACAttttttgtgtgtttg-gtttttttctgaggtggagtctcgct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47101836 196 + 51301725 ACCAGGTCCTGTTGTTACTGGT-TTTTTCCAGAGAcggggtctctgttgcccaggttggagtacggtgatgcagtcatagctcactacagcctcaaactcctgg------gctgggattataggcatgaaccaccgcagcTGGCCTCCTGGTGAATTtaacattttgtgtgtgtttg-ttttttttctgaggtggagtctcgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809313 197 + 50890351 ACCAGGTCCTGttgttactgtt-tttttccagagacggggtctccgttgcccaggttggagtacggtgatgcaatcatagctcactacagcctcaaactcctgg------gctgggattacaggcatgaaccaccgcacctggcctcctggttaatttaacattttttgtgtgtttgtttttttttctgaggtggagtctcgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383336 174 + 49145316 actgggtcctgtt---actGGT-Gttttttagagatgaggcctctgtcgcccaggctggagtacagtgatgtaatcatagctcactacggcctcaaactcctggtttcaagctgggattacagacgcatgccacag--------ttcctggttaat-----------------tttg-aaactttttatagatggggtcgcact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=2800.000000 s hg38.chr19_GL949753v2_alt 106815 1 + 796479 c s panTro4.chr19 59040332 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917806 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968211 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986109 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102032 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809510 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383510 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=306169.000000 s hg38.chr19_GL949753v2_alt 106816 169 + 796479 tgttgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgtcccgctaatttttatagtttttagtagagacagggtttcgccatg s panTro4.chr19 59040333 169 + 63644993 tgtcgcccaggctagagtacagtggtgcaatcttggctcactgcaacctctacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacatcccactaatttttatagtttttagtagagacagggtttcgccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917807 169 + 60714840 tgtcacccagactagagtacagtggtgcaatcttggctcactgcaacctctacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccacgccccactaatttttatagtttttagtagagacagggtttcgccatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968212 169 + 64156825 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986110 169 + 59248254 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagaaacggggtttcaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102033 169 + 51301725 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809511 169 + 50890351 tgtcgcccaggctagagtgcagtggtacaatcttggctcactgcaacctccacctcccaggttcaagcgattctcttgcctcagtctcccaagttgctgggattacaggcatgcgccaccacacctggctaatttttatagtttttagtagagacggggtttcaccatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45383511 0 + 49145316 C e nomLeu3.chr10 102682427 3 - 106955855 I a score=28994.000000 s hg38.chr19_GL949753v2_alt 106985 12 + 796479 ttggtcaggctg s panTro4.chr19 59040502 12 + 63644993 ttggtcaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917976 12 + 60714840 ttggtcaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968381 12 + 64156825 ttggtcaggctg i rheMac3.chr19 C 0 I 367 s macFas5.chr19 54986279 12 + 59248254 ttggtcaggctg i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47102202 12 + 51301725 ttggtcaggctg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46809680 12 + 50890351 ttggtcaggctg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45383511 12 + 49145316 ttacccaggctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=-265.000000 s hg38.chr19_GL949753v2_alt 106997 1 + 796479 t s panTro4.chr19 59040514 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917988 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45383523 1 + 49145316 g i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I e chlSab2.chr6 46809692 1 + 50890351 I e papAnu2.chr19 47102214 1 + 51301725 I e macFas5.chr19 54986291 1 + 59248254 I e rheMac3.chr19 59968393 367 + 64156825 I a score=26094.000000 s hg38.chr19_GL949753v2_alt 106998 13 + 796479 tctcgaactcctg s panTro4.chr19 59040515 13 + 63644993 tctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55917989 13 + 60714840 tctcgaactcctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968760 13 + 64156825 Tcttgaactcctc i rheMac3.chr19 I 367 C 0 s macFas5.chr19 54986292 13 + 59248254 tcttgaactcctg i macFas5.chr19 I 1 I 483 s papAnu2.chr19 47102215 13 + 51301725 tctcgaactcctc i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46809693 13 + 50890351 tcttgaactcctc i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45383524 13 + 49145316 gcttgaacttctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=748703.000000 s hg38.chr19_GL949753v2_alt 107011 419 + 796479 acctca--tgatatgcccacctcagcctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgagctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattatttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctggctcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggttttgtttgtttg---tttgtttgtttgttt-gtttttcagacggagtcttgctctg s panTro4.chr19 59040528 407 + 63644993 acctca--tgatatgcccacctcagtctcccaaagtgccaggattacaggtgtgagccaccac-cccagcc-----ccatttttaaattgtttat-------agacagggtcgtgctctgttacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttgagattacaggcttgagccgc-------tgtg-------tctggcctcttattatt-----------attattttttttttttttgagacagaatctcactc-tgttgcccaggctggagtgcagtgggatgatcctgactcatggcaacctccacctcccgggtccaggtgattctcctgcctcagtctcctgagtagctgggattacaggcgcccatgggt---------------tttgtttgtttgttt-gtttttcagacggagtcttgctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918002 397 + 60714840 acctca--tgatatgcccacctcagcctctcaaagtgccaggattacaggcgtgagccaccac-cccagcc-----ccatttttaaatcgtttat-------agacagggtcgtgctctattacccaggctggg-------------------------cttgaactcctgtgctcaagtgacctttccacctcagcctccctaagtgttaaggttacaggcttgagccac-------tgtg-------tctggccTCTTACTAtt------------ttttgtttattctttttgagacagagtctcactc-tgtt--ccaggctggagtgcagtggcataatcctggctcatggaaa---ccacctcccgggtccaggtgattctcctgccttagtctcctgagtagctgggattacaggcgcccatgggt-------------------tttgtttgttt-gtttttcagacggagtcttgctctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59968773 412 + 64156825 acctca--tgatctgcccacctcattctcccaaagtgccgagatgacaggtgtgcgccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatctcagctgacagcaacctctacct-ccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54986788 413 + 59248254 acctca--tgatcttcccacctcagcctcccaaagtgctgagatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agacagggttgggctgtattgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtgttgacattacaggcttgagcctc-------tgtg-------tctggcctcttattatt----------ttttattcatttattttttgagacagagtcttactc-tgttgcccaggctggagtgcagtggtgtgatcccagctgacagcaacctctacctcccgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcgcccaccacc-------aaacc---tttgggtttttcttc-ttttttgagacggagtcttgctccg i macFas5.chr19 I 483 C 0 s papAnu2.chr19 47102228 414 + 51301725 acctca--tgatctgcccacctcagcctcccaaagtgccgggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgtttat-------agaCAGGGTtgtgctgtattgcccaggctggg-------------------------cttgaactcctgcgcCCAAGTGacccttctacctcagcctccctaagtgttgacattacaggcttgagcttc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttgtgagacagagtcttactc-tgttgcccaggctggagtgcagtggtatgatcccagctgacagcaacctccacctcctgggtccagttgattgtcctgcctcagtctcctgaatagctgggattacaagcacccaccacc-------aaact---tttgggtttttcttctttttttgagacggagtcttgctccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46809706 413 + 50890351 acctca--tgatctgcccacctcagcctcccaaagtgccaggatgataggtgtgagccaccac-cctggcc-----ccatttttaaattgcttat-------agacagggttgtgctgtatcgcccaggctggg-------------------------cttgaactcctgcgcccaagtgacccttccacctcagcctccctaagtattgacattacaggcttgagccgc-------tgtg-------tctggcctcttattatt----------ttttatttatttattttttgagacagagttttactc-tgttgcccagactggagtgcagtggtgtgatcccagctgacagcaacctccacctcccgggtccagttgattctcctgcctcagtctcctgaatagctgggattacaagcgcccaccact-------aaact---tttgggtttttcttc-ttttttgagacggagtcttgctccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45383537 479 + 49145316 tgctcaagtgatccttccacctcagcctccctaagtgttgagattacaggcttcagccactgcgtctagccTCTTACTATAttttatttattcatgtttttgagatggagtctcactctgtcgcccaggctggagtgtgtgatttcagttcactgtgacctccacctcccaggtccaagtgattctcttgcctcagcctcttgggtagctgggat--caggcacctaccaccaAATTTTGTGGGGGTTTTTTGGTTGTTTGTTTTTTGAGACAGAGTCTCAttctttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggctcaatctcggctcactgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccacc-------atgcccagctaatttttgtattt-ttagtagagacggtgtttcaccttg i calJac3.chr22 C 0 I 108 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=347375.000000 s hg38.chr19_GL949753v2_alt 107430 161 + 796479 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacggggtttcac s panTro4.chr19 59040935 161 + 63644993 ttacccaggctggagtgcaatgacgtggtctcggctcactgcaaactccgcctcccaggttgaagtgattctcctgcctcagcctcccgaatagctgggattacaggcgcccgccaccacgcctggctaatttt-gta-tttttagcagagacgggatttcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918399 161 + 60714840 tcacccaggctggagtgcaatgacatggtcttggctcactgcaaactccgcctcccgggttgaagtgattctcctgcctcagcctccagaatagctgggattacaggcacccaccaccacgcctggctaatttt-gta-tttttaacaaagacggggtttcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59969185 162 + 64156825 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gtattttttatcagagacggggttttac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987201 161 + 59248254 tcacccaggctggagtgcagtggcgtggtcttggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcctgccaccacgcatggctaatttt-gta-tttttatcagagacggggttttac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102642 161 + 51301725 tcacccaggctggagtgcagtggcgtggtctcggctcactgcaagctccgcctcctgggttcacgccgttctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagacggagttttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810119 161 + 50890351 tcgcccaggctggagtgcagtggcgtggtctcggctcaccgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaaatagctgggactgcaggcgcccgccaccacgcatggctaatttt-gta-tttttatcagagatggggttttac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384124 161 + 49145316 ttgcccaggttacagtgcagtggcgagatctcagctcactgcaacctgtacctcccaggttcaagccattctgctgcctcagcctccccagtagct-ggactagaggtgcctgccagcatgcctggctaattttggta-tttttagtagaggtggagttttac i calJac3.chr22 I 108 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e nomLeu3.chr10 102682427 3 - 106955855 I a score=258690.000000 s hg38.chr19_GL949753v2_alt 107591 96 + 796479 catttgggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgacccaccgcgcccg s panTro4.chr19 59041096 96 + 63644993 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgacccaccgcgccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918560 96 + 60714840 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgcgacccaccgcgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102682430 96 - 106955855 catgttggccaggctggtcttgaattgctgacctt--gtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctg i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 59969347 96 + 64156825 catgttgccccggctgctctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987362 96 + 59248254 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102803 96 + 51301725 catgttgcccaggctgatctccaactgctgacttc--atgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagctacggTGCCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810280 96 + 50890351 catgttgcccaggctgatctccaactgctgacttc--atgatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccacagtgcccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45384285 98 + 49145316 catattggccgggctggtcttgaacttctgacctcaaatgatctgtgtgcctcggtctcccaaagtgctagggttgctggtgttagccaccgcacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I a score=222472.000000 s hg38.chr19_GL949753v2_alt 107687 92 + 796479 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgtctcccaaagtgctgggatt s panTro4.chr19 59041192 96 + 63644993 gccgagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataatctgtctgcctgccttgcctcccaaagtgctgggatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55918656 92 + 60714840 gccaagatggggttttaccatgttggccaggctggtctcgaactcctgacctcaaataa----tccgcctgcctcgcctcccaaagtgctgggatt i ponAbe2.chr19 C 0 M 1526 s nomLeu3.chr10 102682526 92 - 106955855 gccgagatggggttttaccacgttggccaggctggtctcgaactcctgacctcaaataa----tccacctgcctcgcctcccaaagtgctgggatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969443 92 + 64156825 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctcgcaaagtgctgggatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987458 92 + 59248254 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaagaa----tctgcctgcttcgcctggcaaagtgctgggatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102899 92 + 51301725 Gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810376 92 + 50890351 gccgagatggggttttaccatgttggccaggctggtctccaactcctgacctcaaataa----tctgcctgcttcgcctcgcaaagtgctgggatt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e calJac3.chr22 45384383 0 + 49145316 C a score=22645.000000 s hg38.chr19_GL949753v2_alt 107779 13 + 796479 acCCTGTGCCTGG s panTro4.chr19 59041288 13 + 63644993 acCCTGTGCCTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682618 13 - 106955855 acCCTGTGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969535 13 + 64156825 acGCTGTGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987550 13 + 59248254 acGCTGTGCCCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47102991 13 + 51301725 acactgtgcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810468 13 + 50890351 acaCTGTGCCTGG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45384383 0 + 49145316 C a score=1060010.000000 s hg38.chr19_GL949753v2_alt 107792 504 + 796479 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTCGGGAACCGGGGCTCGGCCAGGAGCGCCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTATGTGCTCCGGAGCTGGGCTACACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTCCTCTCTCTCTCCCTCCTT--CTCTCCA s panTro4.chr19 59041301 504 + 63644993 CCCAGCCTCTTATTTATAACCAGTGTTGAGGGACTGTGTGGAG-CCGGGCACAGGCGAAGCAGGCAGGCTTCCTGCCCTGGTAGGACCTGGTTGCTATAAAAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAGTCACTGAGTCTTGGGAACCGGGGCTCGGCCAGGAGCACCTTTACTTGGACTGAGGGGAATGTGGCCTGCAGACAGTCAGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTATCCTAGCAGGTGGCATGAAACC---GTCTCCCTGGAGAGGTTAAGGAAGAGCAACTCCAGGGGTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGTACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------AGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCTCCAGGTCTCTACCTcctctctctctccctcctt--ctctcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102682631 502 - 106955855 CCCAGCCTCTTATTTATAACCAGCTTTGGGGGGCTGTGTGGAG-CCGGGCACAGGTGAAGCAGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTATGACAG-TCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCTC---CCCTGACCTCCAATCACTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTTCTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAG--TTTCC-----AGGGGACAGCAGGGGCTGTCCTAGCGGGTGGCATGAAACC---GTCTCCCTGGAGAGGTCATGGAAGAGCAACTCCAGGGCTTCCATTTACTCTGTGCTCCAGAGCTGGGCTTCACGGTGGCACTAAGGAGGCAGCGCTAGTCACCTGACCTACAAGGTC-------GGGCTTCTGTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGCCCCCAGGTCTCCACCTC--ccctctctccctccct--ctctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59969548 505 + 64156825 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCGTTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCAGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGACATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTccctccctctccctccctccctctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54987563 505 + 59248254 CCCAGTCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACGTCCCCTC---CCCTGACCTCCAGTCATTGAATCTTGGGAACTGGGGCTTGGCCAGGGGCACCTTTACTTGGGTTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGTGAGGGGACGGCAGGGGCTGTCCTATCGGGCAGCATGAAACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACGGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTAAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGACGATGCCTCCT--TCTCCACCTTCCCTCCCTCTCCCTCCCTCCCTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103004 494 + 51301725 cccggtCTCTTATTTATAACCAGTTTTGAGGGGCTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTccccccccGCCCCGACCTCCAGTCACTGAATCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAACGTGGCCTGCAGATAGTCGGGAGAA--TTTCCAGGCGAGGGGACAGCAGGGGCTGTCCTATCGGGTGGCATGATACC---GTCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTATGAGGTC--------GGCTTC-GTTAGTTACCTATGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGA--ACGatgcctccc--tct------------ctccaccttccctccctctcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46810481 504 + 50890351 CCCGGTCTCTTATTTATAACCAGTTTTGAGGGACTGCGTGGAGTCCGGGCACGGGTGAAGCAGGCAGGCTGCCTGCTCTGATAGGACCTGGTTGCTCTGAAAGTTCCTGCCAGGTGAGCAGAAGGAGCACACTTCCCCCTC--CCCCGACCTCCAGTCATTGAGTCTTGGGAACCGGGGCTTGGCCAGGGGCACCTTTACTTGGGCTGAGGGGAATGTGGCCTGCAGACAGTCGGGAGAA--TTTCCAGGCGAGGGGACGGCAGGGGCTGTCCTATCGGGTGGCATGAAACC---ATCTCCCTGGAGAGGTT----AAGAGCAACTCCAGGGGTTCCATTTACTCCGTGCTCCGGAGCTGGGCTTCACAGTGGTACTGAGGAGGCAGCGCTAGTCACCTGACCTACGAGGTC--------GGCTTC-GTTAGTTACCTGAGAGATGTTACCAGGACAAGCAGCAG-CCTGGTGGGAAGATGATGcctccc--tctccacctcccctctctctccctccct--cTTTCCA i chlSab2.chr6 C 0 I 129 s calJac3.chr22 45384383 499 + 49145316 cccAGCCTC--ATTTATAACCAGTGTGAAGCGGCTGTGTGCAGCCCTGGCAAAGGGAAAGCGGGCAGGCTCCCTGCCCTGGTAGGACCTGGTTGCTGTGAAAGCTGCTGCCAGGTGAGCAGCAGGAGCAC-------------ACCCGCCCTCCAGTCATGGAGTCTTGGTAACCGGGGCTCGGCCAGGGACACCTTTACTTGAGCTGAGGGGACTGTGGCCTGCAGACAGTCGGGAAAGGCTTTCCAGGAGAGGAGACAGCAGGGGCTGTCCTAGTGGGTGGCAGGAAACCGTGGTCTCCCTGGAAAGGTTAAGGAAGAGCAGCTCAAGGGGTTCCACTTACTCTGTGCTCCGGAGCTGGGCTTCACAGTGGTACTAAGGAGGCC---CTCGTCACCTGAGCTATGAGGTCCAGGTCGGGGCGTCTGTTAGTTACCTAAGGCATGTTACCAGGGCAGGCAGCAGCCCTGGTGGCAAGATGATGCCTCCACGTCTCCACCT----------TCCCTCTCT--CTCTCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=134224.000000 s hg38.chr19_GL949753v2_alt 108296 131 + 796479 CCT------CCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCTCT----CTTCCTCCCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CTCCCTCCCTCTCTCCACCTCCCCTCTCTCTC s panTro4.chr19 59041805 155 + 63644993 cct------cccctctctccccctccctctctccacctcccctctctct----cttcctccctctccacctcccctctctctcttcttccctctccacctcccctctctctccctccctctctccacctccccctccctccctctctccacctcccctctctccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683133 112 - 106955855 ccttcctcccctctctccctcccttcttctctccacctcccctct-----------------------------ctctccctccctccctctctccacctcccctctct------------------------ctccctcactctctccacctaccctctctccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59970053 123 + 64156825 cct------cccctctccctcc------ctctccacctcccctctgtca----ccctccatctctccacctcccccctctctccctcc--ctctccacctcccctctgt------------------------caccctccatctctccacctcccctctctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988068 131 + 59248254 CCT------CCCCTCTCTCACCCTCCATCTCTCCACCTCCCCTCTCTCC----ACCTCCATCTCTCCACCTCCCCTCTCTCTCCCTCCCTCTCTCCACCTCCCCTCTCT------------------------CACCCTCCATCTCTCCACCTCCCCTCTCTCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103498 125 + 51301725 cct------cccctctctctccctccctctctccacctcccctctctcaccctccctccctctctccacctcccctctctcaccctccctctctccatctt----------------------------------ccctccctctctccacctcccctctctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384882 112 + 49145316 --------CCTTTCCACAATTTCTCCCTCTTTCCATTTTCcctctctct----------------------accttccctctcccttcctctctacaccttccctctcc-----------------------ccaccacccctctccccaccttccctctccCTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e chlSab2.chr6 46810985 129 + 50890351 I a score=629.000000 s hg38.chr19_GL949753v2_alt 108427 6 + 796479 -TCCCTC s panTro4.chr19 59041960 6 + 63644993 -tccctc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59970176 4 + 64156825 ---tccc i rheMac3.chr19 C 0 M 2760 s macFas5.chr19 54988199 4 + 59248254 ---CCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103623 4 + 51301725 ---cctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45384994 7 + 49145316 TCTACTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I a score=3964.000000 s hg38.chr19_GL949753v2_alt 108433 5 + 796479 CCTCT s panTro4.chr19 59041966 5 + 63644993 cctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988203 5 + 59248254 CATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103627 5 + 51301725 cctct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45385001 5 + 49145316 CCTCT i calJac3.chr22 C 0 M 968 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=36823.000000 s hg38.chr19_GL949753v2_alt 108438 125 + 796479 CTCCACCTCCCCT----------GTCTCCACCTCCCCTCC-----CTCTGTCCCTCCCTCTCTCCACCT-CCCCTCCCTCTGTCC-----------CTCCCTCTCTCCACCTCCCCTCTCT--CTCCCTCCCTCTCTCCACCTCCCCTCTCTCT s panTro4.chr19 59041971 153 + 63644993 ctccacctaccctccctccctccgtctccaccttccctcctctctctccctccctccctctctcccacc-tccctccctctctccatctcccctctctccctctctccagctcccctctctccctccctccctctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988208 104 + 59248254 CTCCACCTCCCCTCTCT--------------------------------CACCCTCCATCTCTCCACCT-CCCCTCTCTCCCT---------------CCCTCTCTCCACCTCCCCTCTCT--CACCCTCCATCTCTCCACCTCCCCTCTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103632 137 + 51301725 ctccaccttccctccctctctcgg--tccaccttcc---------ctcgctccctccctctccccacctgcccctccctccctct----ccccacctcccctttccccacttcccctctct--caccctccctcgctccacctcccctctctct i papAnu2.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605798 94 - 122678785 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7770.000000 s hg38.chr19_GL949753v2_alt 108563 18 + 796479 CTTCCTCCCTCTCCACCT s panTro4.chr19 59042124 14 + 63644993 ----cgctctctccacct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988312 18 + 59248254 CCCTCCCTCTCTCCACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103769 18 + 51301725 gcctccctctctccacct i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19605892 18 - 122678785 CCTCCTACCTCTGCCCAT i canFam3.chr1 I 94 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=10926.000000 s hg38.chr19_GL949753v2_alt 108581 38 + 796479 CCCCTCTCTCTCTTCCTCCCTCTCCACCTCCC--CTCTCT s panTro4.chr19 59042138 32 + 63644993 cccctctccct--------ctctccacctcccctctctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 54988330 38 + 59248254 CCCCTCTCTCACCCTCCATCTCTCCACCTCCC--CTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47103787 36 + 51301725 ctcctctct--ccctctctctctccagctccc--ctctct i papAnu2.chr19 C 0 I 2 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=15564.000000 s hg38.chr19_GL949753v2_alt 108619 98 + 796479 CCCTCCCTCTCTCCACCTCCCCTG----------TCTCCACCTCCCCTCCCTCTGTCCCTCCCTCTCTCCACCTCCCCTCTCTCTGTCCCTCCCTCTCTCCACCTCCC s panTro4.chr19 59042170 102 + 63644993 ccctctctctctccacctcccctctcttcctccttctccacctcccctctctc--tccctccctctctccacctcccctctc----tccctccctctctccacctccc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47103825 76 + 51301725 ccctccctctctccagctcccctc----------tct------------------cacctccctctccccacctcccctctc----tccttccctctcctcacaTCCC i papAnu2.chr19 I 2 I 143 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=-93.000000 s hg38.chr19_GL949753v2_alt 108717 9 + 796479 C-------TCTCTCTG s panTro4.chr19 59042272 16 + 63644993 ccccaccttccctctc i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683245 0 - 106955855 C e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=8774.000000 s hg38.chr19_GL949753v2_alt 108726 36 + 796479 TCCCTCCCTCTCTCCACCTCCCCTCTCTCTCCCTCC s panTro4.chr19 59042288 36 + 63644993 tctctccctccctctacctcccctctccctccctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683245 36 - 106955855 tccctccctctctccACCTTCCCTCTCTCTCCCTCA i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988368 0 + 59248254 C e rheMac3.chr19 59970180 2760 + 64156825 M a score=5304.000000 s hg38.chr19_GL949753v2_alt 108762 16 + 796479 CTCTCTCCACCTCCCC s panTro4.chr19 59042324 15 + 63644993 ctctctccacctacc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683281 16 - 106955855 CTCTCTCCACCTCCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 54988368 16 + 59248254 CACCCTCCATCTCTCC i macFas5.chr19 C 0 I 4 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=7000.000000 s hg38.chr19_GL949753v2_alt 108778 32 + 796479 TCTCTCTCCCTCCCTCTCTCCAC-----CTCCCCTCT s panTro4.chr19 59042339 36 + 63644993 -ctccctccctccctctctccaccttcactcccctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683297 32 - 106955855 TCTCTCTCCCTCTCTCTCTCCAC-----CTACCCTCT i nomLeu3.chr10 C 0 M 619 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=4684.000000 s hg38.chr19_GL949753v2_alt 108810 64 + 796479 CTCTGTCCCTCCCTCTCTCCACCTCCCCTCT------CTCTCTCCCTCCCTC--TCCACCTCCCCTCTCTCC s panTro4.chr19 59042375 72 + 63644993 ctccctccctccctctctccaccttccctctccccacctctctccctccctctgtccacctcccctctctcc i panTro4.chr19 C 0 I 483 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=6999.000000 s hg38.chr19_GL949753v2_alt 108874 96 + 796479 ACCTCCCCTCACTCCACCTTCCCTCTCTCTCCCTC--TCTCTCCTCCCCTCTCCCTCCCTCC----ACCTCCCCTCCCTCTCTCCACCTCCCCTCCCTCTCT s panTro4.chr19 59042930 101 + 63644993 ccctccc-tctctccacctcccctctccctccctccctctctcctcccctctccctccctccctccacctcccctccctctctccacctcccctccttctct i panTro4.chr19 I 483 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e chlSab2.chr6 46810985 129 + 50890351 I e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=16285.000000 s hg38.chr19_GL949753v2_alt 108970 100 + 796479 CCCTCCCTCCCTCCCTCTCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCT----CCCTCCCTCCACCTTCCCTCTCCCTCCCTC--TCCACCTTCCCTCTCT s panTro4.chr19 59043031 75 + 63644993 ccctccctccctctctc-----------------------------caccttccctct----ccctccctccaccttccctctccctccctc--tccaccttccctctct i panTro4.chr19 C 0 C 0 s chlSab2.chr6 46811114 110 + 50890351 CCCTCTCTCCCTCCCTCTCTTCACCTTCCCTCTCTCCCTCTCTCTCCACCTTCCCTCTCTCCCTCTCTCTCCAGCTCCCCTCTCCCTCTTTCTGTCCACCTTCCCTCTCT i chlSab2.chr6 I 129 I 11 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I e rheMac3.chr19 59970180 2760 + 64156825 M a score=9422.000000 s hg38.chr19_GL949753v2_alt 109070 27 + 796479 CCTCCCCTCTCCCTCCCTCTCTCCACC s panTro4.chr19 59043106 17 + 63644993 cc----------ctccctctctccacc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973000 27 + 64156825 cctcccctcaccctccctctctccacc i rheMac3.chr19 M 2760 I 5 s chlSab2.chr6 46811235 27 + 50890351 TCCCCTCTCTCCCTCCCTCTCTCCACC i chlSab2.chr6 I 11 I 5 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47103901 143 + 51301725 I e macFas5.chr19 54988384 4 + 59248254 I a score=3760.000000 s hg38.chr19_GL949753v2_alt 109097 6 + 796479 TCCCCT s panTro4.chr19 59043123 6 + 63644993 tcccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973032 6 + 64156825 tctccc i rheMac3.chr19 I 5 C 0 s papAnu2.chr19 47104044 6 + 51301725 tcttct i papAnu2.chr19 I 143 C 0 s chlSab2.chr6 46811267 6 + 50890351 TCTCCC i chlSab2.chr6 I 5 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e calJac3.chr22 45385006 968 + 49145316 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=27227.000000 s hg38.chr19_GL949753v2_alt 109103 42 + 796479 CTCTCCCTCCCTCCC----TCCCTC----TCTCCACCTTCCCTCTCTCCC s panTro4.chr19 59043129 45 + 63644993 ctctccctccctccc----tccctccctctctccacctatcctctctcc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973038 42 + 64156825 cacctcccctcaccc----tccctc----tctccacctcccctctctctc i rheMac3.chr19 C 0 I 17 s papAnu2.chr19 47104050 41 + 51301725 ttctttctctctccc----tccctg----tctccaccttccctctctcc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811273 46 + 50890351 CACCTCCCCTCTCTCACCGTCCCTC----TCTCCACCTCCCTTCTCTCTC i chlSab2.chr6 C 0 I 17 s calJac3.chr22 45385976 36 + 49145316 ctcaccttcccttcc----tatctc----tctctaccttttctc------ i calJac3.chr22 M 968 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e macFas5.chr19 54988384 4 + 59248254 I a score=6780.000000 s hg38.chr19_GL949753v2_alt 109145 9 + 796479 TCCCTCTCT s rheMac3.chr19 59973097 9 + 64156825 tccctctct i rheMac3.chr19 I 17 C 0 s macFas5.chr19 54988388 9 + 59248254 TCCCTCTCT i macFas5.chr19 I 4 C 0 s chlSab2.chr6 46811336 9 + 50890351 TCCCTCTCT i chlSab2.chr6 I 17 C 0 s calJac3.chr22 45386012 7 + 49145316 --catctct i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M e nomLeu3.chr10 102683329 619 - 106955855 M e papAnu2.chr19 47104091 0 + 51301725 C e panTro4.chr19 59043174 0 + 63644993 C a score=31992.000000 s hg38.chr19_GL949753v2_alt 109154 23 + 796479 CCACCTTCCCTCTCTCTCTCTCC s panTro4.chr19 59043174 12 + 63644993 ------tccc-----ctctctcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683948 21 - 106955855 ccaccttccc--tctctctctcc i nomLeu3.chr10 M 619 C 0 s rheMac3.chr19 59973106 21 + 64156825 ccacctcccc--tcactctctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988397 21 + 59248254 CCACCTCCCC--TCACTCTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104091 19 + 51301725 --acctcccc--tctctctctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811345 21 + 50890351 CCACCTCCCC--TCTCTCTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386019 20 + 49145316 ccgccttccc--tctctctccc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19605910 0 - 122678785 C e ponAbe2.chr19 55918748 1526 + 60714840 M a score=311701.000000 s hg38.chr19_GL949753v2_alt 109177 126 + 796479 CTCCCTCTCTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTGTGTATCTCTGGATCCCTG-- s panTro4.chr19 59043186 126 + 63644993 ctccctctctccAGCTCATGCTATCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGTATCTCTGGATCCCTG-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102683969 126 - 106955855 ctccctctctccAGCTCATGCTTTCTGGGTCTCCCTCTGACTTTCTAGGTCCTGTCTGAGATTTTGCT--CTTTCTGTTCCCCGTTCTGGGCCTCCCCGTCACCACTCTGTGTGTCTCTGGATCCCTG-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973127 126 + 64156825 ctccctctTTCCAGCTTATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTGCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988418 126 + 59248254 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCACTCTATCTCTGGATCCCTG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104110 126 + 51301725 ctccctctttccagcTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGagattttgct--ctttttgttcccctctctgggcctccctgTCACCACTCTCTGTATCTCTGGATCCCTG-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811366 126 + 50890351 CTCCCTCTTTCCAGCTCATGCTATCTGGGTCTCCCTCTGACTTTTTAGGTCCTGTCTGAGATTTTGCT--CTTTTTGTTCCCCTCTCTGGGCCTCCCCGTCACCACTCTCTGTATCTCTGGATCCCTG-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386039 116 + 49145316 ---------tccgcctcatgctatctgggtctccctctGA-TTTCTAGGTCCTGTTTGAGATTTTGCT--GTTTCTATTCCCCTCTCTGGGCCTCCCTGTCACCACTCTGTGCATCTCTGGATCCCTG-- i calJac3.chr22 C 0 I 4 s canFam3.chr1 19605910 118 - 122678785 CTCCTGCCCTGCAGTTCACACTTTCT--------CTCTGGGGCTCTGG---CTGTCCGAGATCTATCTCCCTCTCTTTTCCTCTTTCTGGGCTGCCCT-CCACCCCCCACTGTCATACTTGCTCTGAGTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e ponAbe2.chr19 55918748 1526 + 60714840 M a score=1716115.000000 s hg38.chr19_GL949753v2_alt 109303 559 + 796479 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACTCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGTATAACTCAAGTCTGTTTTCTCAA--TGTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTCAATCTCAGGAAAGGAATCTTGAGTCGCCTGGGCCTGCAGCCCT----CGTACTTTCAGAAcagaggttctcagaatttaatgcgcttcagaattacactgag-gacttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA s panTro4.chr19 59043312 559 + 63644993 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TAAATCTCTCTCCTTCCTAAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCCTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TGTTATCCGTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAAGTTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAACCCTGTTCAGAATCCCCCATCTCCCTTGGCCGAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTCGAGTCGCCTGGGTCTGCAGCCCT----AGTACTTTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtatgtgcctgacccaaggccacatttcagaagcactgCTCTAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920282 560 + 60714840 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAGTTGGCAATCTC-TAAATCTCTCTCCTTCCTCAAGTCAAAAAGTCGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCTCAA--TTTTATCCCTGACCCTGTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCATGGTCCACAATCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCCGGCATCTACCAATGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTAGTCTCAGAAcagaggttctcaaaatttaatacgcttcagaattacactgag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcctttcaaacaagttcccaggtgatgggtacgcgcctgacccaaggccacatttcagaagcactgCTGTAGCAAA i ponAbe2.chr19 M 1526 C 0 s nomLeu3.chr10 102684095 555 - 106955855 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGGCAATCTC-TGAA--TCTCTCCTTCCTCAAGTCAAAAAGTTGACA-CACCCAGGAGGTTCCTTTGAGTGGCTGAACTACCCCAGGTTGCATAACTCAAGTCTGTTTTCCCAA--TTTTATCCCTGACCCTCTGGGTCAACCCTGTTTGAAAATGACAACCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCCGTGGTCCACAGCCCTGTTCAGAATCCCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCATGAGGGCGTGAATCTCAGGAAAGGAATCTTGAGTCACCTGGGCCTGCAGCCCT----AGTGCTCTAAGAAcagaggttctcaaaatttaatacgcttcagaattacaccaag-ggcttgttaaaa-catagttgctaggcccagagtttctgattc----agtctagggtggg-gctcaaaaatctgcctttcaaacaagttcccaggtgatgggtatgcgcctgacccaaggccacattgcagaagcactgCTCTAGAA-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973253 550 + 64156825 TCCTTCATCCCAGAGCTCTGTCCCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCACAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGTTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcattggagaagccctgCTCTAGAA-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54988544 552 + 59248254 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTT----TGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTGTGTTCAGAATCTCTCATCTCCCTCGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAGTCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccgag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcatttcaaacaagttcccaggtgataggtatgcgcctgatccaaggccgcatcggagaagccctgCTCTAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47104236 555 + 51301725 TCCTTCATCCCAAAGCTCTGTCTCAGGACCTCAG-TGGCAATCTCTTgagtctctctcttccctcaagTCAAAAAGTCGACA-CCCCTGGGAGCTTCCTTTGAGTGGGCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCCCCCGTCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGAGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----GGTAC--TCAGAACAGAGGTTCTCCAAATTTAATACGCTTCAGAATCACAccgag-ggcttgttaaaa-cacagttGCTGggcccagagtttctgattc----agtctaGGGTGGG-GCTCAAAGATGTGCATTTcaaacaagttcccaggtgataggTATGCGCCTGATCCAAGGCCGCACTGGAGAAGCCCTGCTCTAGAA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46811492 555 + 50890351 TCCTTCATCCCAGAGCTCTGTCTCAGGACCTCAG-TGGCAATCTC-TGAATCTCTCTCCTCCCGCAAGTCAAAAAGTCGACA-CACCTGGGAGCTTCCTATGAGTGGCCAAACTACCCCAGGTTGCCTAAGTCAAGTCTCTTTCCTCCA--TTTCATCCCTGACCCTTTGGGTCAACCCTGTTTGAAAATGACAGCCTTTGCTGATCTCTACATACTGGTCTGCCAGGGAAGGACCTGTGGTCCCCAGCTCTGTTCAGAATCTCCCATCTCCCTTGGCCAAAATATCTGGCATCTACCAATGGGGCTGTGGCACGGGGGTGTGAATCTCAGGAAAGGAATCT-GAGTCACCTGGGCCTGCAGCCCT----AGTAC--TCAGAAcagaggttctccaaatttaatacgcttcagaatcacaccaag-ggcttgttaaaa-cacagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaagatgtgcattt-aaacaagttcccaggccataggtctgcgcctgatccaaggcctcatttgcgaagccctgCTCTAGAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386159 539 + 49145316 TCCTTCAACCCAGAGCTCTGTCTCTGGACCTCAG-TGACAATCTC-TGAATTTCTCTCCTCCCTCAAGTCAAAAAGTCATCA-TACCTGGGAGGCTCCTCTGAGTGGCCGAACTACCCCAGGATGCATAACTGAAGTCTGTTTCCTCAA--TTGTATCCCTGACCCTCTGAGTCAACCCCGTTTGGAAATGACAGC-------------------CTGGTCTGCCAGGGAAGGACTGGTGGTCCACAACACTGTTCAGAATCCCCCATCTCCCTCGGCCAAAATATCTGGCATCTACCAGTGGGGCTGTGGCATGAGGGTGTGAATCTCAGGAGAGGAATCT-GAGTCACGTGGCCCTGCGGCCCT----AGTGTGCTCAGAAcagaggttctcaaaatttaatacgcttcagaattctacagag-ggcttgttaaaa-catagttgctgggcccagagtttctgattc----agtctagggtggg-gctcaaaaatgtgcatttcaaacaagtttccaggtgatgggtatgtggctgatacaaggccacatttgagaaGCTTTGCTCTAGAAAA i calJac3.chr22 I 4 C 0 s canFam3.chr1 19606028 494 - 122678785 TGTCTCAGTTCAGGGCTCACTCTGGGGACCTCAG-CAGC--TCTT-TGAACCTCTCCCCTCACATTAG------AGTCTCCATCACCTGGGAGATTCCTTCTAATGGCCAAATTACCCCAGGTCACGTCACT------TGGTTTCTCCAACTTTTATCCCTGAGCCTTTAGATCAGCCCTGTTGGAAAGTTAAAAACTTGGCTGATTGCTG---ATGAGTCTGCT--GGAAGGGTGCTCTGCCCGCTACTC--TTCACAACCTTCA--CCCACTTGTCCGGAG--------------------------------------------TCAAGAAAGG-ATCT-GACTCCTCTGGTGCTGCAGTCCTGCGAAGTCT--------Tagagattctcaaagcttaatatacttcag-attacccagggtggcttgttaaaaccaaggttgcagagtccagagtttctgcttccattggtctagggtgggaactcaaaagtgtggatttctagtaagttcccaggtgatgtttaggctgctgat-tgagacctcactggagaaccactgCCCTAGAAAA i canFam3.chr1 C 0 I 136 e mm10.chr7 3641526 2427 + 145441459 I a score=1500.000000 s hg38.chr19_GL949753v2_alt 109862 1 + 796479 G s panTro4.chr19 59043871 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920842 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 54989096 1 + 59248254 G i macFas5.chr19 C 0 M 10062 s chlSab2.chr6 46812047 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386698 1 + 49145316 G i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e nomLeu3.chr10 102684650 0 - 106955855 C e papAnu2.chr19 47104791 0 + 51301725 C e rheMac3.chr19 59973803 0 + 64156825 C a score=172945.000000 s hg38.chr19_GL949753v2_alt 109863 94 + 796479 AAGACTCTGTAAGCGGCTCTTACgctgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggtgggagaatggcttgaacct s panTro4.chr19 59043872 94 + 63644993 AAGACTCTGTAAGTGGCTCTTATgctgggcgtg-----gtggctcacgcctgtaatcccagctacttggtaggctgaggcgggagaatggcttgaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920843 94 + 60714840 AAGACTCTGTAAGTGGCTCTTACAccgggcgcg-----gtggctcacgcctgtaatcccagctacttgggaggctgaggcgggagaatcacttgaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102684650 98 - 106955855 AAGACTCTGTAAGTGGCTC-TACGCCGGGCGCGTAAGTGTCTCTcacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973803 93 + 64156825 AAGGCTCTGTAAGTGGCTCTCACGCT-GTcgcg-----gtggctcacgcatgtagtcccagctccttggcaggctgaggtaggagaatctcttgaatct i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104791 93 + 51301725 AAGTCTCTGTAAGTGGCTCTCacgct-ggcgcg-----gtggctcacgcatgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812048 90 + 50890351 ---TCTCTGTAAGTGGCTCTCACGCT-ggcgcg-----gtggctcatgcacgtagtcccagctccttgggaggctgaggtaggagaatcacttgaatct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386699 86 + 49145316 -------TATAAGTGGCCCTTAggccaggtgca-----gtggcgcatgcctgtaatcctagctactcaggaggctgagacaggagaatcgcttgaacc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e macFas5.chr19 54989097 10062 + 59248254 M a score=80451.000000 s hg38.chr19_GL949753v2_alt 109957 53 + 796479 gggaggcagaggttgcagtgagccgagatggcgcccctgcactccagcctggg s panTro4.chr19 59043966 53 + 63644993 gggaggcagaggttgcagtgagccgagatggccccactgcactccagcatggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684748 53 - 106955855 gggaggcagaggttgcagtgagccgagatggcgccattgcactccagcctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973896 44 + 64156825 gggag--------tgcagtgagccgagat-gcgccactgctctctagcctggg i rheMac3.chr19 C 0 I 47 s papAnu2.chr19 47104884 53 + 51301725 gggaggtggaggttgcagtgagccgagatggcaccactgctctccagcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812138 53 + 50890351 gggaggcagaggttgcagtgagccgagatggcgccgctgctctccagcctggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45386785 53 + 49145316 ggaaggcagaggtggcagtgaaccaagattgcgccactgcactccagcctgga i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=528.000000 s hg38.chr19_GL949753v2_alt 110010 11 + 796479 t-----gagagagACA s panTro4.chr19 59044019 11 + 63644993 t-----gagagagACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684801 15 - 106955855 tg-acagagagagact i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47104937 9 + 51301725 -------agacagaca i papAnu2.chr19 C 0 I 38 s chlSab2.chr6 46812191 9 + 50890351 -------agacaCACA i chlSab2.chr6 C 0 I 20 s calJac3.chr22 45386838 15 + 49145316 -ccacagagtgagact i calJac3.chr22 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59973940 47 + 64156825 I a score=9341.000000 s hg38.chr19_GL949753v2_alt 110021 6 + 796479 CTGGCT s panTro4.chr19 59044030 6 + 63644993 CTGGCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684816 6 - 106955855 ccgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59973987 6 + 64156825 CTGGCT i rheMac3.chr19 I 47 C 0 s papAnu2.chr19 47104984 6 + 51301725 CTGGCT i papAnu2.chr19 I 38 C 0 s chlSab2.chr6 46812220 6 + 50890351 ctggct i chlSab2.chr6 I 20 C 0 s calJac3.chr22 45386853 6 + 49145316 ctgtct i calJac3.chr22 C 0 I 1589 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e macFas5.chr19 54989097 10062 + 59248254 M a score=3000.000000 s hg38.chr19_GL949753v2_alt 110027 2 + 796479 CC s panTro4.chr19 59044036 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102684822 2 - 106955855 cc i nomLeu3.chr10 C 0 M 1644 s rheMac3.chr19 59973993 2 + 64156825 CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47104990 2 + 51301725 CC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812226 2 + 50890351 cc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e macFas5.chr19 54989097 10062 + 59248254 M a score=48332.000000 s hg38.chr19_GL949753v2_alt 110029 68 + 796479 CACCTCAAGATCGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt s panTro4.chr19 59044038 68 + 63644993 CACCTCGAGATTGTTTTAGTTGGTCCAGTGTAAGCCTGGGTATCTGGACttttttattttttattttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59973995 68 + 64156825 CACCTTGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTGGACTTCTTTTTTTTTTTTTTTT i rheMac3.chr19 C 0 I 558 s papAnu2.chr19 47104992 64 + 51301725 TACCTCGAGATTGTTTTAGTTGGTCTAGTGCAAGCCTGGCTATCTggacttcactttttttttt---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812228 65 + 50890351 cacctcgagattgttttagttggtctagtgcaagcctggctatctggacttCAtttttttttttt--- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M a score=121488.000000 s hg38.chr19_GL949753v2_alt 110097 270 + 796479 attttttgagacggcgtcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaacctctgcctcccaggttcaagtgattctcccgcctcagcctcccgagtagctgggattacaggcacatgccaccatgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccctacctcaggtgatccgcccacctcggcctctgagagtgctgggattacaggtg s panTro4.chr19 59044106 270 + 63644993 tatttttgagacggcatcttgctctgtcacccaggctggagtgcaatggcgcaatctcgggtcactgcaatctctgcctcccgggttcaagtgattctcccgcctcagccctccgagtagctgggattacaggcgcctgccaccatgcccagctaattttcgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatcctcccacctcggcctctgagagtgctgggattacaggtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105056 270 + 51301725 tttttttgagacgtagtcttgctctgtcacccaggctggggtgcagtggcacgatctcggctcactgcaacctccacctctcgagttcaagcaattcttgtgcctcaggttcccgagtagctgggattataagcgtgcgccatcacgcccggctaatttttgtaattttagtagacatggggtttcaccatgttggccaggctggtctcgaactcctggcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812293 266 + 50890351 --ttttgggtacgtagtcttg--ctgtcacccaggctggagtgcagtggcacgatctcggctcacggcaacctccacctctcgagttcaagcgattctcatgcctcaggttcccgagcagctgggattacaagcgtgcgccatcacgcccggctaatttttgtacttttagtagacacggggtttcaccctgttggccaggctggtctcgaactcctggcctcaggtgatccgcccgcctcggcctcccaaagtgctgggattgcaggcg i chlSab2.chr6 C 0 I 70 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=340.000000 s hg38.chr19_GL949753v2_alt 110367 3 + 796479 caa s panTro4.chr19 59044376 3 + 63644993 caa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47105326 3 + 51301725 tga i papAnu2.chr19 C 0 I 73 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=9366.000000 s hg38.chr19_GL949753v2_alt 110370 117 + 796479 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcccggcccggcctGGCCTCTAATTTAAAAAAAATTTTTTTTTTTTAAA-GTTCCTCAGGTAggcca s panTro4.chr19 59044379 118 + 63644993 tggcgcaatctaggctcactgcagcctctgcctcccgggttcaagtgattctcctggcccggccCAGCGTCtaattaaaaaaaaaagttttttttttaaaaGTTCCTCAGGTAggccg i panTro4.chr19 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e macFas5.chr19 54989097 10062 + 59248254 M e rheMac3.chr19 59974063 558 + 64156825 I a score=2234.000000 s hg38.chr19_GL949753v2_alt 110487 10 + 796479 ggcgcagtcg s panTro4.chr19 59044497 10 + 63644993 ggcgcagtgg i panTro4.chr19 C 0 I 1 s macFas5.chr19 54999164 10 + 59248254 ggcacagtgg i macFas5.chr19 M 10062 I 1 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e chlSab2.chr6 46812559 70 + 50890351 I e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=37810.000000 s hg38.chr19_GL949753v2_alt 110497 72 + 796479 tcacgcctgtaatcccagcactttgggagactgaggcgagcggatcacctgaggtcaggagttcgacaccag s panTro4.chr19 59044508 72 + 63644993 tcacgcctgtaatcccagcactttgggagactgaggcgggcggatcacctgaggtcaggagttcgagaccag i panTro4.chr19 I 1 C 0 s macFas5.chr19 54999175 72 + 59248254 tcacacctgtaatcccagcactttgggaggccgaggtaggcggatcacctgaggccaggagttcgagaccag i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46812629 72 + 50890351 tcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggccaggagttcgagaccag i chlSab2.chr6 I 70 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I e rheMac3.chr19 59974063 558 + 64156825 I a score=21244.000000 s hg38.chr19_GL949753v2_alt 110569 27 + 796479 cctggccaacatggtgaaaccccgtct s panTro4.chr19 59044580 27 + 63644993 cctggccaacatggtgaaaccccgtct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 59974621 27 + 64156825 cctggtcaatatggtgaaacccccact i rheMac3.chr19 I 558 C 0 s macFas5.chr19 54999247 27 + 59248254 cctggtcaatatggtgaaacccccact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812701 27 + 50890351 cttggtcaacatggtgaaacccccact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e nomLeu3.chr10 102684824 1644 - 106955855 M e papAnu2.chr19 47105329 73 + 51301725 I a score=118453.000000 s hg38.chr19_GL949753v2_alt 110596 93 + 796479 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaacccc s panTro4.chr19 59044607 92 + 63644993 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcacctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102686488 92 - 106955855 ctactaaaaatacaaaaattagtcgggtgtggtggcaggcgcctgtaatcccagctactcgggaggct-------gaggcgggagaatcacttgaaccc- i nomLeu3.chr10 M 1644 C 0 s rheMac3.chr19 59974648 99 + 64156825 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999274 99 + 59248254 ctactaaaaatacaaaaattagtcgggcgtggtggcaggcgcctgtaatcccagctactcgggaggcgggaggctgaggcaggagaataacttgaaccc- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46812728 92 + 50890351 ctactaaaaatacaaaaattagtcgggcgtggtggcgggcgcctgtaatcccagctactcgggaggca-------gaggcgggagaataacttgaaccc- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e ponAbe2.chr19 55920937 0 + 60714840 C e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=132028.000000 s hg38.chr19_GL949753v2_alt 110689 75 + 796479 gggaggcagaggctgcagtgagcctagattgtgccactgctctccagcctgggggacaagagcaagtcttcgtct s panTro4.chr19 59044699 75 + 63644993 gggaggcagaggctgcagtgagcctagattgtgccactgcactccagcctgggggacaagagcaagacttcgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55920937 75 + 60714840 gggaggcagaggctgcagtgagcctagattgtgccacagcactccagcctgcgggacaagagcaagacttcgtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686580 75 - 106955855 gggaggcaaaggctgcagtgagcctagattgcaccactgcactccagcctgggggacaagagcgagatatcgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974747 75 + 64156825 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i rheMac3.chr19 C 0 I 9 s macFas5.chr19 54999373 75 + 59248254 gggaggcggagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcgtct i macFas5.chr19 C 0 I 9 s chlSab2.chr6 46812820 75 + 50890351 gggaggcagagcttgcagtgagcctagattgtgtcattgcactccagcctgggggacaagagcaagacttcatct i chlSab2.chr6 C 0 I 12 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I e papAnu2.chr19 47105329 73 + 51301725 I a score=24414.000000 s hg38.chr19_GL949753v2_alt 110764 21 + 796479 ---caacaacaacaacaataacaa s panTro4.chr19 59044774 12 + 63644993 ---caacaacaacaa--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921012 18 + 60714840 ---caacaacaacaa---caacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686655 15 - 106955855 ---caacaacaacaa------caa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974831 21 + 64156825 CACCAACAACAACAA---TAACAa i rheMac3.chr19 I 9 C 0 s macFas5.chr19 54999457 21 + 59248254 CACCAACAACAACAA---TAACAa i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47105402 21 + 51301725 caccaccaacaataa---caacaa i papAnu2.chr19 I 73 C 0 s chlSab2.chr6 46812907 21 + 50890351 caccagtaccaccaa---caacaa i chlSab2.chr6 I 12 C 0 e mm10.chr7 3641526 2427 + 145441459 I e canFam3.chr1 19606522 136 - 122678785 I e calJac3.chr22 45386859 1589 + 49145316 I a score=264536.000000 s hg38.chr19_GL949753v2_alt 110785 108 + 796479 caagttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCGCGGTGTGCAAAGTG--AACTGCGGACCGTG-----GACTGCGGCACTTGTTAGAAAAG s panTro4.chr19 59044786 112 + 63644993 ---gttcctcaggtgactctg---atgtgcagccaagttgg-aaagtcatcg--CTAGATCCgcggtgtgcaaagtgtgaactgcggaccgtgtccgtcactggggcacttgttagaaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921030 114 + 60714840 aaagttcctcaggtgactctg---atgtgcagccaagtttg-aaagtcaTCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacgtcactg-ggcacttgttagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686670 116 - 106955855 aaagttcctcaggtgactctg---atgtgcagccaagtttgaaaaGTCATCA--CTAGATccttggtgtgcaaagtgtgaactgtggaccgtgtacatcactggggcacttgttagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974852 117 + 64156825 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999478 117 + 59248254 aaagttcctcaggtgactgtg---atgtgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccatgtgcatcactggggcacttgttagaaaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105423 117 + 51301725 aaagttcCTCAGGTGACTGTG---ATGTGCAGCCAAGTTTG-AAAGTCATCACTCTGGATCATTGGTGGGCAAAGTGTGAACTGTGGACCCTGTGCATCACTGGGGCACTTGTTAGAAAag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46812928 117 + 50890351 aaagttcctcaggtgactgtg---atatgcagccaagtttg-aaagtcaTCACTCTGGATCATTGGTGGGcaaagtgtgaactgtggaccgtgtgcatcactggggcacttgttagaaaag i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19606658 116 - 122678785 caagccacccagggtattgtagccacgtgcaaccaaatttg-agaaccactgCTCTGTATccttgctactcaaagtgccaactgtggagcatcagcatcacctggcaactcctgaat---- i canFam3.chr1 I 136 C 0 e mm10.chr7 3641526 2427 + 145441459 I e calJac3.chr22 45386859 1589 + 49145316 I a score=302552.000000 s hg38.chr19_GL949753v2_alt 110893 99 + 796479 Cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaagcgatactttgTCCAGGGGCCACAGTTTGAATAG---CAGAGCTCTAGAAC s panTro4.chr19 59044898 80 + 63644993 cagaatttgcattttaacacattcctaggtgattccggagatgtct--gagaaacaatactttgTCCAGGTGCCACA----------------------AGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921144 99 + 60714840 cagaatttGCATTTTAACACATTGCTAGGTGATTCCGGAGATGTCT--GAGAAGCAATACTTTGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686786 99 - 106955855 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGATGTCT--GAGCAGCAATACTTCGTCCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59974969 99 + 64156825 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999595 99 + 59248254 cagaatttgcattttaacacattcctaggtgattccggaggagtct--gagaagcactACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105540 99 + 51301725 cagaatttgcattttaacacatTTCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i papAnu2.chr19 C 0 I 335 s chlSab2.chr6 46813045 99 + 50890351 cagaatttGCATTTTAACACATTCCTAGGTGATTCCGGAGGAGTCT--GAGAAGCAATACTTTGTGCAGGGGCCACAATTTGAATAG---CAAAGCTCTAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388448 96 + 49145316 caaaatttgcatcttaacaagttccc---tgattccagggaagtct--gagaagcactACTTTGTCCAGGAACCACACTTTGAATAG---CAAAGCTCTAGAAc i calJac3.chr22 I 1589 C 0 s canFam3.chr1 19606774 103 - 122678785 cagaatatgcattttaacaaatctccagttggttcCC-AGATGTCTGAGAGAGGCATTGCTCCATCCAGGGACCACACGTTGAAGAGTGTTGTGGCTCTAGATC i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=84130.000000 s hg38.chr19_GL949753v2_alt 110992 37 + 796479 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGTGTGTGG s panTro4.chr19 59044978 37 + 63644993 AATAACT--------------------------------------------------------GTAGGCTTCATTCCCGTTGTCTGTGTGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921243 37 + 60714840 AATAACT--------------------------------------------------------CCAGGCTTCATTCCCGTTGTCTGTGTGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686885 37 - 106955855 AGTAACT--------------------------------------------------------CTAGGCTTCATTCCCGTCGTCTGTGTGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975068 37 + 64156825 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 54999694 37 + 59248254 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47105974 37 + 51301725 aataact--------------------------------------------------------ctagGCTTCATTCCCGTTGTCTGCATGTGA i papAnu2.chr19 I 335 C 0 s chlSab2.chr6 46813144 37 + 50890351 AATAACT--------------------------------------------------------CTAGGCTTCATTCCCGTTGTCTGCATGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388544 91 + 49145316 agtaactcccaaacggtaatgcacacggggatcacc--gggaagtctgtgaagatgcagatccccaggcttcattcccgttgtctgtgtgtgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19606877 91 - 122678785 AATGGCCATCCAACTccagtgagcatggggatcacccagggaagtgtgtaaaagtgcagacgtctaggcttcgctatctccatcggtgtag-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3641526 2427 + 145441459 I a score=6001717.000000 s hg38.chr19_GL949753v2_alt 111029 1648 + 796479 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCCTCCTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGTCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcagggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcattagggagccaccc------------------gtCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGACGCAGAGGAGAATGACTGTCCTACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAACGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTTTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCAGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA s panTro4.chr19 59045015 1648 + 63644993 GCCTACGAATA-TGCATTTTCGCAAGCATTCCTCCTCCCCCTCGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATCGTTTTTCACGTTCACCTCTCCCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGAATCTGGCTTCCCATCTCGGTTGTGTGTGTGACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATCCatctattcctttgacaaatggttact----acttcctgcgtgctaagtgctggagatgcaaaATCCAGACAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggcgcgcaggagcgctccgcccgggagggaggtcacggaagttttctctccaagaagacaacagagctgagacctgaaacgagcaggcgttagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGAGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGACATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAG----AGGGAAGCTGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAACGATAACTGTTAGGGCC-AACGAAGAAAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCTGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCATAGCTCCTCCCCCAGACCAATTGTTTTAAGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCACGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAAAGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACTGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55921280 1642 + 60714840 GCCTACGAATA-TGCATTTTTGCAAGCATTCCTCCTCCCCCTTGCCTCAGACCATTCTGATGCGGGTGGTGCTGAACGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGATTTATCTGACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTGAATCTCAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtgctaagtgctggagatgcaaaATCCAGAC--GGAAAC-CGAATAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAagcgcgcaggagcgctccgcct----gggaggtcagggaagttttctctccaggaagacaacagagctgagacctgaaaccagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGCGGAGATGCA---GAGAATGACTGTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCTTCAC-GCTTCCCAACCAATTCTGCCATGCACGG---TGCCAGTGACTTA-AAGCAGTGTCTCTGGTCCCTTTCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTTGCGACCAAGTCCCACTTCTGCCAGCTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACTGTTAGGACCAAACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTAAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCGTAGCTCCTCCCCCAGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCC-ATCGAACGCCGCG-CTTGGAGCTACCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTTCCAGAAACCAATAGAACGCCTCCAAGGATCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102686922 1648 - 106955855 GCCTACGAATA-TGCATTTTAGCAAGCATTCCTCTTCCCCCTTGCCTCAGACCATTCTGATGC-GGTGGTGCTGAAGGGCTCCATACTTGTTCACGTTCACCTCTCCCTGGGGTTTATCTTATTTTCCACTACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGGAAGCCTCAGTGTCTAATAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacagatggttactgactacttcctgcgtgctaagtgctggaaatgcaaaATCCAGACAGGGAAAC-CGAGTAATTACGAAAATGACGGTAGACGTACAAAAATAAATCCTAACGAACAAggctcgcaggagcgctccgccc----gggaggtcagggaagttttctctccaagaagacgacagagctgagacctgaaacgagcaggcattagGGAGCCACCT------------------GTCTCCTCTGTACCTTCTGCAGCGTCCTCAACACACTAAGGAAGAGGAGATGCAGAGGAGAATGACTGTGTCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCTATGCCTCAC-GCTTCCCAACCAATTCTGCTATGCACGG---TGCCAGTGACTTA-CAGCAGTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAATAATGAATTTCAGAGATGTGCCAACATAGAGGCACTTGGAGAAAGACGAGGCAGCTGAGAGACAGGGAAGCAGCTTACCTGGCCGGGACGCAAGGGTCGCGCCCAAGTCCCACTTCTGCCAGCTACATACACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCAAGCTATTGGTCAAACCAGCAGGAATGATAACTGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCACTTGGCCCAGTGGCTGTTTTGATTGGCAGATGATTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGTCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCCAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCCCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCAGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-Gggaggaggaggaggagcgggga-gAAA-ACCTGGGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCGATCACCCAATCCGCGAAAGGGGGCAGGGCGCATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCTTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59975105 1641 + 64156825 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGAGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttgacaaatggttaccgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacgatagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgacagagctgagacctgaaacgagcaggaattagggagccaccc------------------gtCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCACCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GGGAGGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCAGAGACGAGACGAGAAGAGAGGAGGCCAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGACCCCC-------GTCGTC-AGAACAA i rheMac3.chr19 C 0 M 434 s macFas5.chr19 54999731 1636 + 59248254 GCCTAAGAATA-TGGATTTTTGCAAGCGTTCCTCC-CTCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCATCTATTCCTTTGACAAATGGttactgactacttcctgcgtgctaagtgctggagatgcaaaatccagacagggaaac-cgaataattacgaaaatgacggtagacgtgcaaaaataaattctaacgaacaaggcgcacaggagcgctccgccc----gggaggtcagggaagttttctccccaagaagatgagagagctgagacctgaaacgagcaggaattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCGGCGGCGTCCTCAACACGCTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGTCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACGGAGGCACTTGGGGAAAGAAGAGGCAGCTGAGAGACAGGGAAGGAGCCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTTCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGAGTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGATCCCCGAGCCCC-------GTCGTC-AGAACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47106011 1633 + 51301725 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACTCCGTACTTACTCACCTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGCGTG----ACCCTGGGCAAATGCCTCCCGGTTCGTGGAAGCCTCAGTGTCTAGTAAGTTTTCAATCACAAGTCATTCCTc--------------acattcattcatctgttcctTTGACAAATGGTTACTGACTACTTCCTGCGTGCTAAGTGCTGGAGATGCAAAATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACgtgcaaaaataaattctaacGAACAAGGCGCACAGGAGCGCTCCGCCC----GGGAGGTCAGGGAAGCTTTCTCCCCAAGAAGACAACAGAGCTGAGACCTGAAACGAGCAGGCATTAGGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCAC-GCTTCCCAACCAGTTCTGCTATGCACGG---TGCCAGTGACTTA-AAGCACTGTCTCTGGtcccttccttctttcactc-------agcaaat----aATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGA---AAGAGGCAGCTGAGAGACAGGGAAGCAGCCTACCTGGCCGGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCTAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTgaggc-gggaggaggaggaggagcggggaggaAA-ACCTGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGAcgagaagagaggaggggaggcctCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGccccgaccccc-------gtcgtc-agaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46813181 1637 + 50890351 GCCTAAGAATA-TGCATTTTTGCAAGCGTTCCTCC-CCCTCTTGCCTCAGGCCATTCTGAT-------GTGCTGACCGACCCCGTACTTGTTCACGTTCACTTCTCTCTGGGATTTATCTTACTTTCCACCACCTAGACAGGAAGGGGCGGATCTGGCTTCCCATCTCGGTTGTGTG----ACCCTGGGCAAATGCCTCCGGGTTCGTGGAAGCCTCAGTGTCTAGTAGGTTTTCAATCACAAGTCATCCCTC--------------ACATTCATTCatctattcctttgacaaatggttactgactacttcctgcgtactaagtgctggagatgcaaaATCCACATAGGGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATTCTAACGAACAAGGCGCACAGAAGCGctccgccc----gggaggtcagggaagttttctccccaagaagacaacagagctgagacctgaaacgagcaggcattagGGAGCCACCC------------------GTCTCCTCTGTACCTTCTGCGGCGTCCTCAACACACTAAGGAAGCGGAGATGCAGAGGAGAATGACTCTCCCACCATCTGGTCGCCTAACCAGGCAGGGGCAGGACAAAAACTCCACGCCTCACGGTTTCCCAACCAATTCTGCTATGCACGG---TGCTAGTGACTTA-AAGCACTGCCTCTGGTCCCTTCCTTCTTTCACTC-------AGCAAAT----AATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGAAGAGGCAGCTGAGAGACAGGAAAGCAGTCTACCTGGCCAGGACGCAAGGGTTGCGCCCAAGTCCCACTTCTGCCAGTTACAT--ACACCCTCTTTCACACGCTCTACGAGCAGCTACCGCCCACTCGCCACGCTATTGGTCAAACTAGCATGAATGATAACCGTTAGGGCC-AACGAAGAGAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATGACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCATTAGGTACGCGGCCTCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATTACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACTGTCCTAGCTCCTCCCCGCGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGTTCGGGTCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GggaggaggaggaggagcggggaggaAA-ACCCGAGCCAATCCTAGCAGGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGCAATCACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTGCCAGGAACCAATAGAACGCCTCCAAGGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTCGGGACTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGTCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45388635 1638 + 49145316 gcctaagaaaa-tgcatttttgcaagCACGCCTCC-CTCTCTTGCCTCAAGCCATTCTGATGCGGGTAGTGCTGAACGGCTCCACACTAGTTCACGTTCACTTCTGCCCTGGATTTCTCTTACCTCCCACCACCTAGAGAGGAAGGGGCGGATCTGGCTTCCCATCTCGACTGTGTG----ACCCTGGGCAAATGCCTCCCAGTTCGTGCAAGCCTCAGTGTCTAGAACGTTTTCAATCACAAGTCATTCCTC--------------ACATTCATTCatctattcctttggcaagtggttactggctacttcctgagtgcgaaatgctggagatacaaaATCCAGACAGTGAAAC-CGAATAATTACGAAAATGACGGTAGACGTGCAAAAATAAATCCTAAccagcaaggcgcacatgagcgctcaacac----gggaggtcagagaagttttctccctaagaagacaacggagctgagacctgaaacgaggaggcattagGGAGCCACCC------------------GACTCCGCTGTACCTTCTGCACCGTCCTCAACacagtaaggaaactgaggagca---gagaatgactgtcc--ccatctggtcacgtaacgaggcagaggcaggacaaaaactccatacctcgc-gcttcccaAGCAACTCTACTATGCACAA---TGCCAGTGGCTTAGAAGCACTATGTCTGGTCCCTTCCTTCTTTCACTC-------AGCAGATAATGAATTTCAGAGATGTGCCAACACAGAGGCACTTGGAGAAAGACGGGGCAACTGAGAGAGAGGG-AGCAGCCCTCCTGGCCGGGACGCAAGGGATGCGCCCAAGTCCCACGTCTGCCGACT------ACACCCTCTTTCACACGCTCTATGAGCAGCCACCGCCCACTCGCCACACTATTGGCCAAACTGGCCTGAATGATAACCCTCGGGGCC-AACGAAGATAAAGGGGTGGACTTTCTTGCCCAGCTCCTCCCCCTTGGCCCAGTGGCTGTTTTGATTGGCAGATAACTTCGGCT--CGGCCCCCGCTTTGAAGGCACCTGTCTGTCTCCCAGTAGGTACACGGCCCCTAACGCCCACACTCCATGCCTTCCTCCGCTTTCC-CCACCCACTTCCAGGACCAACCAATGACTTCAAGGCAGAATATGCCCCCGCAACCAATTAAAAAGAGCTCTAAACTTGACGGACGACTTCCCGCCCCTGGACCGTCCTAGCTCCTCCCCCGGACCAATTGTTTTAGGAGAGGGGGGCGGATACATCCAATCAGCACGACACAGGTCTCTTGATTGACGCTCGGGTCCTCGCGCTGGCGTGTTGTGCCCCGAGGC-GGGAGGAGGAGGAGGAGCCGGCAGGAAA-ACCTGAGCCAATCCTAGCAAGCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGTGATTACCCAATCCGCGAAAGGGGGCAGGGCACATCCCTACCAGGAACCAATAGAACGCCCCCAAAGGTCAGGAGCGACGTTCAGCGGGAGCAATGACAGGCCTATATTTGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCGTCCCTTGAGCCCCGACCCCC-------GTCGTC-AGAACAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3643953 1433 + 145441459 gccGAAGAATA-TGCCTTTTTATAAGCCATTTTTT-CTCTCTTGCTTCATGCCATTCTGAT-------GCGGTGAA-------ATGCACGTGCACGTTCTCTTCAAGTGTGGATTTATCTTCTTTTCCTCCACATAG-TAGGCAGAGATAGATCGAGTTTC-------------------------------------CCCAATTCATGAAAAC----GTGGTGCTCACGTTTGCAACCT--AGTCA-------------------------------------------GCAAAGGGCTATGGAGTGCTTCATGGGTACTAAAC------AACGAGAAATCCAGAGAGTGAGACTCAAGTATGTGTAAAAACGGCAGGAATCAAACAAAATTAAACC--------AGAGGCTCACCTAAGCACTCGGCAA----GGGTGGTCGGAGAAGTTTACTCCTTAAGAAG----CATAGC--AGAACTCTAGTGAGTAGTCATTACAGATGTAACCGAGGTAGGGCAAAGCGCAGTTTCCTCTACAGCT-----GGAGTCCTTGCAACTCCAGGGAAG-----------------------GTCCCA--GTCTGCTAACTTAACCAGAGA-------AACGTCAGTCCCACGCCTTGT-GTTTCTCAGTCGCTTCTGC--------------------------AA----TGTTCCTGATTCCTTCTTTCTTTCTTTCATCCTTTAGAAAGCACTGAGTTTTAGAGATATACCAA-GCAAACGCGCTTGGGGAATAACTACGAGGATCAGAT-------AACAGCCTA---GACAGGCAAAGGAAGGATGC--------------TCCGACAACCACAC---------------------CTGTCGGCAGGT------TAATAGCTACCCTATTGGCTAA--------------------------CC-GAGGGAAGGGGCGGGGTG------TTTGTCTAGCTCCTCCCCTTAGGGCTGGCGGCTCTTTTGATTGGTAGATGACTTGGGTTTACTATCCCCAACCCTCTGGCACCTCTCCGTCTCCCACTAGATAAGCTTCCTTTAACACTCACACGCTATGCTTTTTGTCGTTTTCCTCTACCCACATTCATAGCTAACCAATGAGTTCAGGGTAGAATACA-CCTCGCAACCAATTACAGCTGCCTTTAAACTTGACGAGTAACTTCCCGCCCCT----CACCCTGACTCCTCCCCGCTGCCAATTGATTTAGGGTAAGGGGGCGGACACATCCAATCAGCACGACACAGGCTTCCTGATTGACACCCAGGTCCTCGCGCTGGCGTGTTGTGCTCCGAGGAGGGGAGGAGGAGGAGGAGCTGGGAAGAAATACCCGAGCCAATCCAAGCAAGCTGAGCGGGAGGCCAATCGAACGCCGCGCCTTGCCGAGATCAGCCAATCATAATGAAGAGGTTGGCCTCATTCTCGCTAGGAACCAATGGGGCGCGCCTAACGGCGCAGAGCGACGTACTGCGGGAGCAATGACGGACCTATATTCGGGGCTCGGGGGCGGGCCGGCGCCA-----GAGAGGAGAAGAGAGGAGGGGAGG---CCTCCGCCGCCGCCATCTTGGACCGGGCCCGTTCAGCTTCCGTGGAGCCGTCGGCAGCCGCTGCCGGGCCTTTCCTTGATCCCTGAATCCCCTACTCGGTCGTCTAGAACAA i mm10.chr7 I 2427 C 0 s canFam3.chr1 19606968 1304 - 122678785 acctgggaacactgcgttttcacaaac---ccttc-ccctactttgccaggcgattccgat--------------gcaGCCC---------TCACTTGCAC--CCTCCTTGGATTTGTCCT--TCCCCAC---------------------------CTTCCCATCTAGACCGTCTG----ACCCTGGGCAAATGCCTCAGGGTTCGTGAAAGCACCAGTGCCTCCCGAGTCGTCGACCACAAGTCTTCCCTCGCATGCATGCACATGCATTCATTCATTCCTTCCCTGAGCCAACAGTTACTG---TGTTCCTGCG--------------GATGCCAGCTCCAGG-AGGGCAGC-C----------------------------------------------------GGGGCGCCGGAGGGCACAGGGC----G----------------------------------------------------------------------------------------------ATCTCCTGCGTATCCTCTGCATTGTCCTCACGACGCGGAGGAAGCGGACGTGCAG------------------------------------AGGCAG----------------------CTCCT-GTTCCCCCGCC------GCGGAGCGCGGATCTGCCGGT-------GACCACTGCCTC----------CCTCCTCCGATC-------TACAACC-CTGAGTCCGAAACATG---------AGAATCCC---------AAACAGGCAGCG-------AGAGGAGCA--CTACGCGCCCGGGAGCCAAG--------------------CCCGCCTGCT------ACGCCCGGTTTCACACGCCGCGAAGGCCGGTGCCGCCCCCTCGCTGCGCCCCTGGACTGGCCGCGGTGAGCGACAGCTGTCCTGGCC-AACGAGCGGAGAGGGGCGGGCCCGCCGGCCCAGCTCCGCCC-CGTGGCCCAGC-GCAGCTTTAATTGGCAGGCGACTTCGGCA----------------------CCTGTCCTCCTCCCATTAGGTGTAAGGCCTTTCACGCCCACGCTCCACGCCTGCCTCCGCTTTCC-CCACCCACTTCCGGAGCCAACCAATGGCCTCGGGGCAGAAGATCCCCTCACAACCAATTACAAACGGCCCTAAACTCGACGCCCGACTTCCCGCCCCT-GATCAGCCTGGCTCCTCCCCGCGGCCAATTGGTTTAGGAGAGGGGGGCGGGTGTATCCAATCAGCACGACAGTGGCGTCTTGATGGACGCGCGGGCCCTCGCGCTGGCGTGTTGTGCCCTGAGGC-GG--GGAGGAGGAGGAGCGGGGAGGAAA-ACCTGAGCCAATCCTAGTAGCCTGCGCGGGAGGCCAATCGAACGCCGCGCCTTGGAGGGATTGCCCAATCGGCGAGAGGGGGCCGGCTGCGTCCTGGCCAAAGACCAATAGGGTGCGACCGAAGGGCAAGAGCGACGTGCCGCCGGAGCAATCACAGGCCTGTGCACGGGGCTCGGGGGCGGGTCGGCGCCA-----GAGACGAGAAGAGAGGAGGGGAGGCCTCCTCCGCCGCCGCCATCTTGGACCGGGCCCGGTCAGCTTCCGCGGAGCCATCGGCAGACGCCGC---GGCCTCCCCTGAGCCCCGA-CCCC-------GTCGTC-AGAACAA i canFam3.chr1 C 0 C 0 a score=136755.000000 s hg38.chr19_GL949753v2_alt 112677 38 + 796479 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG s panTro4.chr19 59046663 38 + 63644993 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922922 38 + 60714840 CCCC-GGGCCCACT--CC------------CCTAACCCCAC-TTCCG--CTTCGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102688570 40 - 106955855 CCCCGGGGCCCACT--CC------------CCCAACCCCACTTTCCG--CTTCGCG i nomLeu3.chr10 C 0 M 635 s macFas5.chr19 55001367 38 + 59248254 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107644 38 + 51301725 cccc-gggcccact--cc------------cccaaccccac-ttCCG--CTTCGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814818 38 + 50890351 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390273 38 + 49145316 CCCC-GGGCCCACT--CC------------CCCAACCCCAC-TTCCG--CTTCGCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645386 52 + 145441459 TCCC-GGGCCCACT--TCCTCTATCAACAACCCAACCCTAC-TTCCGGCTTTCGCG i mm10.chr7 C 0 I 2 s canFam3.chr1 19608272 40 - 122678785 CCCC-GGGCCCACTTCCC------------CCCCACCCCAC-TTCCG--CTTCGCG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 59976746 434 + 64156825 M a score=1206097.000000 s hg38.chr19_GL949753v2_alt 112715 490 + 796479 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCGCCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG s panTro4.chr19 59046701 490 + 63644993 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCTTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCTCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGTTCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55922960 490 + 60714840 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTCCCCGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTGCGCCTCTTTCACGCCCCTCAGCGCCTCCCGGGGGTCCTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55001405 490 + 59248254 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTTTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47107682 490 + 51301725 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGgaccccttcccctcctccc-cccggcgccatcggccgcccttcccgcagcctcccgccctGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGCTCCCGGCGGGGGGCGGCTCCCTCCCTCTCGCCCTCCCGTTCCTCCGCCTCTTTCAcgcccctcagcgccgcccgggggtccttccgcgacccggaccccgggccccgcccgccgccacctccccgcgtggcatcgcgtcgg-gccccccggTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46814856 490 + 50890351 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CCCGGCGCCATCGGCCGCCCTTCCCGCAGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGCCTC--CCCT---CGCCTGCCCCCTGCCGCCGCCTCTG---CAGCGCCGGGCTCCCGGCGGGGGGCGGctccctccctctcgccctcccgttcctccGCCTCTTTCACGCCCCTCAGCGCCGCCCGGGGGTCCTTCCGCGACCCGGACCCCGGGCCCCGCCCGCCGCCACCTCCCCGCGTGGCATCGCGTCGG-GCCCCCCGGTAGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390311 491 + 49145316 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGCGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCCTCCCGGCACCATCGGCCACCCTCCTTGCCGCCTCCCGCCCTGGCGACACCGCCGTCTGTCGCGACATGGTCTC--TCCT---CGCCCGCCCCCTGCCGCCGCCTCTG---CAGCGCGGGGTTCCCCGCGGGGGGCGGctccctccctctcgccctcccgctcctccgcctccttcacgcccctcaccgccgcccGGGGGTCTTTCCGCGACCCGGAccccgggccccgcccgccgccgcctccccgcgTGGCATCGCGTCGG-GCCCCCCGGTGGGGGTGTGAGGGTGCGAAGCCTCCCGGGCGCGAGGTGCCCGCCCCTCTCCGCGTCGGTATTGGCTCCTGGCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645440 406 + 145441459 CTCTTATCGCGATAGCGCCCGGGCTCGGGGCGCGAGGAAAGAGGAAAAAAAAAAAAAAAAAAGGCGGCGGGCGGGCGCTCGCCTCTCTCTCCCCCCTCCTCGCCTGTCGCGATACGCTCCGCAGCGGCGGCGCCAGCTCCTGCGGT--GAGCGTCAGGTTCGACTGGGCCGGACCCCTTTCCCTCTTCC--CTCAGCTCCATCGGCCG-----------ACTTCTTGCTCC-GCGACCCTGCTGCCTGTCGCGACACGGCCTCAGCTCC---CGCCGGGCCCAAGCCGCGCGCTCGGGCCCAGCTTCGG--CTCGGGCGGGCGGGGACCCTCTCC----------------------TCTCTCT------------------------GTCCTCCCGCG-TCCGGAC------------------------TCCCGCGTGGCAGAGCGCCGG---------------------------------CCCCGGGTGCGAGGTGCCCGTCCTCCTCCGCGTCTGGCTGGGCTTG------ i mm10.chr7 I 2 C 0 s canFam3.chr1 19608312 375 - 122678785 CCGCTATCGCGATAGCGCCCGGGCCCGGGGCGCGAG---------------------AAAAAGGC----GGCGGGTGCTCGCCTC------------CCCCGCCTGTCGCGATACGCTCCTCAGCGGCGGCGCCAGCTCCTGTGGTGAGAGCGTCAGGCTCGACTGGGCCGGACCCCTTCCCCTCCTCCC-CC--------------------------------------GGCGCCACCACCGCCTGTCGCGACATggccgc--ccccgcacccccggcccccgcgggcggACCTC---C-------GGCTCCCGGCAGG-GGCGgcccc-------------------------------------------ggcgcccgcc----gccctgcc----cccgccccccgtgcccccctcgtccgcgccccgcggcg-------gcgccggaggtcccccgcgggggtccggtggtg----------cgggcgcgcgggg-ccgccccTTTCCGCGTCGGGGGCGGC----GGCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59976746 434 + 64156825 M a score=286512.000000 s hg38.chr19_GL949753v2_alt 113205 122 + 796479 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG s panTro4.chr19 59047191 122 + 63644993 CAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGTGGGGCAGCCTCCGCGCCGGGGCT-----TCTCCCTCGACGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923450 122 + 60714840 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGATCCTTCGCGTTGTGGGGCAGCCTCCGCGCAGGGGCT-----TCTCCCTCGACGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977180 122 + 64156825 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i rheMac3.chr19 M 434 C 0 s macFas5.chr19 55001895 122 + 59248254 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108172 122 + 51301725 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTgcctgcccccctcggcctcggTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-----TCTCTCTCGACgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815346 120 + 50890351 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTCGGGGCTCAGGTGCCTGCCCCCCTCGGCCTCGGTCCTTCGCGTTGGGGGGCAGCCTCCGCGCCGGGGCT-------TCTCTCGACGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390802 124 + 49145316 GAAGGATGGAGGCGC--CCCTGGTCCCAGGTGCCCGCCCTCTC-GGGCTCAGGTGCCTGCCCCCCTCGCCTTCGGTCCCTCGCGTTG-GGGGCAGCCT-CGCGCTGGGGCTTCTCTTCTCCCTCGACGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3645846 38 + 145441459 GAGCGGTGGG----------------------------------------------------------------------CGCGCTGCGGG-------CCGCGGAGGGGTC-----TTTC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19608687 90 - 122678785 -GGGGAGGGGGTCTCCACCCCGGGGCCAGGTCCC---------------------CCTGCAccgcccgccgccggccccc----------ggcAGCCTCCGC--CAAAGTT-----TGCCCCGCAGCGG i canFam3.chr1 C 0 I 263 e nomLeu3.chr10 102688610 635 - 106955855 M a score=24866.000000 s hg38.chr19_GL949753v2_alt 113327 15 + 796479 TGGCGGGGAGG--GGGG s panTro4.chr19 59047313 15 + 63644993 TGGCGGGGAGG--GGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923572 17 + 60714840 TGGCGGGGCGGGTGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977302 15 + 64156825 TGGCGGGGTGG--GGGG i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55002017 15 + 59248254 TGGCGGGGTGG--GGGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47108294 15 + 51301725 tggcggggtgg--gggg i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46815466 15 + 50890351 TGGCGGGGTGG--GGGG i chlSab2.chr6 C 0 I 12 s calJac3.chr22 45390926 11 + 49145316 TAGCGTGGAGG------ i calJac3.chr22 C 0 C 0 e mm10.chr7 3645884 0 + 145441459 C e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2822.000000 s hg38.chr19_GL949753v2_alt 113342 7 + 796479 GTGGTGG s panTro4.chr19 59047328 7 + 63644993 GTGGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923589 7 + 60714840 GTGGTGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002033 7 + 59248254 GTGCCAA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47108310 7 + 51301725 gTGCCAA i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45390937 7 + 49145316 GTGCCAG i calJac3.chr22 C 0 I 4 s mm10.chr7 3645884 3 + 145441459 -TGC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e chlSab2.chr6 46815481 12 + 50890351 I e rheMac3.chr19 59977317 13 + 64156825 I a score=650.000000 s hg38.chr19_GL949753v2_alt 113349 1 + 796479 T s panTro4.chr19 59047335 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923596 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55002040 1 + 59248254 C i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47108317 1 + 51301725 C i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46815493 1 + 50890351 C i chlSab2.chr6 I 12 C 0 s calJac3.chr22 45390948 1 + 49145316 C i calJac3.chr22 I 4 C 0 s mm10.chr7 3645887 1 + 145441459 T i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M e rheMac3.chr19 59977317 13 + 64156825 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 113350 1 + 796479 C s panTro4.chr19 59047336 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923597 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59977330 1 + 64156825 C i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55002045 1 + 59248254 C i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47108322 1 + 51301725 C i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 46815494 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390949 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3645888 1 + 145441459 C i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I e nomLeu3.chr10 102688610 635 - 106955855 M a score=2493823.000000 s hg38.chr19_GL949753v2_alt 113351 889 + 796479 GGGACGAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCCAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTTTGGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGTCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCGTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGATCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCGCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGTCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCCCTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATCTTCACACCAGTCTCCTCCTTTAGGGTGTCAGCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG s panTro4.chr19 59047337 886 + 63644993 GGGACAAGGA-CCCCAGCTGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCT---GTCTCTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTC--ATAGCGAGTAGCGCCCTGGGTGGCTCAAGCCTCGCCATCCCGCTGCACTGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCGTGACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGTTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAAGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCACCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCATTTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAAGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGACTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55923598 885 + 60714840 GGGACGAGGA-CCCCAGGTGGGTGGGGA-AGTCACCCTT--CCAGGACCGAGG-CCGCCCTCCGCATCCCTCCTCACTG--CTCCCGGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCTGTATCGGAT-GGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTTC--CTCTCCTAGCGAGTAGCGTCCTGGGTGGCTGAAGCCTCGCCATCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTAACTCTCCGACCTTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-ACCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCGGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCTACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTCGCTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGTGGCTTCTTCCGCCTTCATATCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACAC--TGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCCGCAGTT--GGAGAACAAGGATTTTGCCTTCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102689255 913 - 106955855 GGAACGAGGA-CCCAAGCTGGGTGGGGGAAGTCACCCTTCCCCAGGGCCGAGGCCCGCCCTCCGCATCCCTCCTCACTGGCTCCCCGGGAGCGGCAGCCTCCCCTGGATCTCAGGGTTCCCAGCTGCCCG--GTCTGTATTGGATGGGGAGCCTCTTGGGAGAAGA--------GTGGAGGAGAAACTCCCC-------------------------ATTAGTTTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCT--CTCTCATAGCGAGTAGCGCCCTGGGTGGCTCAAGCATCGCCATCCCGCTGCACCTGGCGCCTGCCTTTT-GGGGGAGTTTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTTGATCCTGGCGTCT-----GCTCCTGGCTTTGCAGCCTCAAACTCCCCTGCATCCTGACTCTCCGACCCTCTGGGTGTGGGCCTCTCCCAGTGATATCAGG-GCCACTGTGGTCTTGGTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCCTGGTGAAGGCTTCGTGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCAATGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCCTTCACCCCTGCCTGAGTATGAGGCTTCTTCCGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCTCCCTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTTA-----CGCTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCCTTCCCG i nomLeu3.chr10 M 635 C 0 s rheMac3.chr19 59977331 875 + 64156825 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCCGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGCGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAGCCCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002046 874 + 59248254 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCAGTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCATGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCGCTCAGTGCAGGG-CGGGCACCCCCCC-ACCCCAGGTGAGCTCTCCTGCCCTTTTGGTGAGGGATTTTGATGTCTCCC---------TTCACCCCTGCCTG----TGAGGCTTCTTCTGCCTTCACACCAGTCTCCTCCTTTAGGATGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCACACTGTGGGTTTGTTATCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47108323 871 + 51301725 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCT-TCCCGCTGCCCCGGGCGCCTGCCTTTT-gggggggTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTGAGCTCTCACACTTCTTGGATAGTGCTGTCT-----GCCCCTGGctttgcagccttgaactcccctGCATCCTGACTCTCCGAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAGGTGCC--------------TGGT-GAAGGACACTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTCCCACTGCGGGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----GCCGGGGTGAGCTCTTCTGCCCTTTTGGTGAGGGGTTTTGAAGTCTCCC---------TTCACCCCTGCCTG----TGAAGCCGCTTCTGCCTTCACACCAGTCTCCTCCTCTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATACTTGCATCAGATCCCACACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCGGCAGTT--GGAGAACAAGGGTTTCGCTTTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46815495 875 + 50890351 GGGACGAGGA-CCTCAGCGGGGTGGGGG-AGTCACCCTT-CCCAGGACCGAGG-CCACCCTCCGCATCCCTCCTCACTG--CTCCCCGGAGC-GCAGCCTCCCCTGGATCTCAGG--TTCCAGCTGCCC---GTCCGTATCGGAT-GGGAGCCTCTTGGGAGAGGA--------GTGGAGGAGAAACTCCTC-------------------------GTTAG-TTGGAGCCTTTGCCGAAGTTTCCACCTCTGTAGTCTGCAGCTCTTCC--CTCTCGTAGCGAGAAGCGCCCTGGGTGGCTCAAGCCTCGCA-TCTCGCTGCACCGGGCGCCTGCCTTTT-GGGGGGGTCTGG------------------------------------------------------------CTTTCCCCCACCTGGGGTACAGGACCGTCCTCAGTGTGGCCCACGT-CTGGCCTCAGCTCTCACACTTCTTGGATCGTGGTGTCT-----GCCCCTGGCTTTGCAGCCTTGAACTCCCCTGCATTCTGACTCT--GAC---CTGGGTGTGGGCCTCTCCCGGTGATGTCAGG-GCCACTGTGGTCTTGCTGCTGGGGGCTGCTGGGCTCCCCTGGCGCTCAAGTGCC--------------TGGT-GAAGGACGCTAAG-CCCCCACGCTGTCCA-TGTT-AGTGAGCTTCCACTGCAAGCAGCGCCAGCCCCTCTTTCTGAGCAGTCCCTGCCTCTCAGTGCAGGG-CGGCCACCCAC----CCCGGGGTGAGCTCTCCTGCCCTTTTGGTGAGGGGTTTTGATGTCTCCCCTCACTCCTTTCACCCCTGCCTG----TGAGG---CTTCTGCCTTCACACCAGTCTCCTCCTTTAGGGTGTCATCTCTCCAGGGACCAAGAAGCCCACTGCCCTTGATATTTGCATCAGATCCCGCACTGTGGGTTTGTTGTCTTCCCATCTACCCTCA-----CACTGGGTGTCAGCAGTT--GGAGAACAAGGGTTTCGCTTTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45390950 847 + 49145316 GGGACGAGGACCCCCCCCTGGGTGCGGG-AGTCCCCCTT-CCCGGGGCCGAGG-CGGCCCCCTGCATCCGTCCGCACTG--CTCCCCGGAGC-GCAGCTTCCCCTGGACCTCGGG--TTGCAGCCGCCC---CTCCGTATCGGAC-----------------AGGA--------GTGGAGGAGAAACTCCGC-------------------------GCTAG-TTGGAGCCTCAGCCGAAGTTTCCAGCTCTGTAGTCTG-AGCAGTTCC--CTCTCTTAGCGAGAAGTGCCCTGGGCGGCTCAAGCCTCAGCATCCCG-------------CAGCCTTTC-CAGGGAGTCTGG------------------------------------------------------------CTTTCCTGGCACTGGGTTCCAGGACCGTCCTCGGTGTGGCCCCCGG-CTGGCCTCGGCTCTCACTCTT----GATTGTGGTGTCC-----GCCCCTGGCTTTGCAGAGGCGAACTCTCCTGCATCCTGACTCT--GACCTTCTGGGTGCGGGCCTCTCCCTGTGATGTCAGC-GCCACTGTGGTCCTGGCGCTGGGGGCTGCTGGGCTCCCCCAGCCCTCAGGTGCC--------------TGGT-GAAGGACACGAAG-CCCCCACACTTTCCA-CGTTAAGTCGGCTCC---------CAGCGCTAGCGCTTCTTTCTAGGCAGCCCCTGCTTCTCAGTGCAGCG-TGGTCACCCTCCCTCCCCGGGGTGAGCTCTCTTGGACTTTTGGTGAGGGGTGTTGGTGTCTTCC-TCACTCCCTTTGCCTCTGCCTGGGTATGAGGCTTCTTTCCCCTTCACACAAGTCTCCTCCTTTGGGGTGTCATCACTCCAGGGGCCAAGAGGCCCACTGCCCTTGCTGTTCGCATCAGATTCCCCACTGTGGGTTTGCTGACTT-CCGTCTACCCTCA-----CACTGGATGTCAGCAGTT--GGAGAACAAGGGTTGCGCCTCCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3645889 842 + 145441459 ------------------TGGGCGCGGG-GCCCACTCCT-----GCAGTCATG-CCTTCCCCGGGAGCTC-----------CATTCGGGAGC-GTTGCCTCAGTGCACCCGAAAG--CTCCAGCTTGTTGGTGTCTTGATAGGG--GGAAGCCTCTTTGGAAGAGATGGATCTTGTGGAGGAAAAAGTCCCCAAGACCCGAGGGTGCAGTTAACGTTGTGAG-TTGGAGCCTAAGCCAAAGTTTCCACCT-----------AGTCCTTACAGCTCTAGCAGTGA--AGTCTCCTAGAGG---------------TCCCTTTCCACCA---ATCTTCTTTTT-AAGGAAGCATGGGGTTtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTTTGTTTTAACACTCCCTCCCCAAACCTTGGATTCAGGACTGTACC--GTATTGCTCACTTCCTGGCTTCACATCTTTTGCATCTTTGA-GGTGGGGTATCAGTGGACTCTAGCTTTGGGGATGCAGGCTCCACTAC-----GATGCACGGTCTGCCTCGGTGGGTGAAGCTTCCTAAGTGGTTAGGTATTGCTGTG-----TGTGGTGAGGACCGCTTAGCTTTTCT----TTCTAGATCT--------------GGGTCGGTGGAATGCGAG-CTCCCATGCTTTCAGTTGTT-GGTGCTCTTCTGTTG-GGACAGTTGAAGCAC----TTCTAAACAG---CTGTATCTCGGTTCCGGGACTGTCATCCCT----CTTAGGATTAGCT-TTCTGTTCTTTTGGCTAGGGGCTT-----CCTCAC--------CGTCTCCCTTCCCCG-------------------------------GTCATCACCTGGACTGCCATCTCTCTG--------------------TATTTCCATTCTCATCTGCCCAGCCTATGTGGATATGTGATCTT-----TTATAATTGAAATCCACTGGGTGAAAGCGTTTCAGAGGTAGAATGGT----CCATCTCA i mm10.chr7 C 0 C 0 e canFam3.chr1 19608777 263 - 122678785 I a score=1828067.000000 s hg38.chr19_GL949753v2_alt 114240 562 + 796479 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTTTTCTGGATTTGAGGTGTCCACGCCTCTGCATGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTCATGCTTCCAAAACCCCCTCTTGATTTGTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGATTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA s panTro4.chr19 59048223 562 + 63644993 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCACCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCACTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTAGACCCTGTCCCTTGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAGGTGGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTTCTTCTGGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CTGGGTTAAGGATCACCCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55924483 562 + 60714840 CCCCGCTGCTGGTACCCCGTGAGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGATTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCATCGTAAGGCTGAGGACCCCTCTCGGATGCAGGTTCCCCCGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTTCCTG-GCTGTGTGGATGTAAGATACCTAAGTCTCAAGCAGGAGACTC-CACTGTAGACCCCGTCCCTGGGAC-CAGAGATTTCTCTGGTGTAGAC-TTTCCAAGGTAGGAGTTTCCAGCCCCCCACCCTTGGCATGGGGCATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCTCTAACGCGTCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGACCACATCAGCAGCCAC----CCGGGTTTAGGATCACCCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690168 559 - 106955855 CCCCGCTGCTGGTACCCCATGAGAGTAGGAAGCTTCCTAGACTCG------GGTCCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTCGCCTCCCCCAGGGATAAGGTTCTTGCTATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCATAAGGCTGAGGACCCCTCTCGGATGCAGGTGCCCCTGGCTAATGCTTCCAAAACCCCCTCTTGATTTTTCACTGTATGGGGTAAGGCATGATTTCCTG-GCTGCGTGGATGTAAGATACCTGAG--TCAAGCGGGAGACTC-CCCTGTAGACCCGGTCCCTGGGAC-CAGAGATTTCTCTGGTGCAGAC-TTTCCAAGGTAGGAGTATCCAGCCCCCTACCCTTGGCATGGGG-ATCTC-AGT--------------GGAGATGACTACCTCTACCCCAGGCCCTAACGCATCCTCCTTCCAGAGTCTCAGAGCCTCTGTGTGGCCACGTCAGCAGCCAC----CCGGGTTAAGGATCACCCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978206 561 + 64156825 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAGGGACCCTTTCTTGGTGTTGCCTACCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCCCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55002920 561 + 59248254 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTACGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTACGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCGGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109194 561 + 51301725 CCGCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCCAGACCCG------GGTTCCTGTACT-GCG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATCG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGCGTGTGTCCCCACCGTAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAACGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCCTG-GCTGTGTGGATGTAAGATACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CGGAGACTTCTCTGGTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-GGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACGCATCCTCCTTCTAAAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CCAGGTTAAGGATCACCCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816370 561 + 50890351 CCCCGCTGCTGGTACTCCATGGGAGTAGGAAGCTTCCTAGACCCG------GGTTCCTGTACT-GTG-AGGT-GGGGGCTCTTCCCTCTGGGGCTGTGCCTTCT-CTCCAGGGTAAGGACCCTTTCTTGGTGTTGCCTCCCCCAGGGATAAGGTTCTTGCCATCCTTGGTATTGGTATGG-CTGCTCTTCTGGATTTGAGGTGTCCACGCCTCTGTGTATGTCCCCACCATAAGGCTGAGGATCCCTCTCGGATGCAGGTGCCCCCGGCTAATGCTTCCAAAACCCCGTCTTGATTTTTCACTGTATGGGGTAAGGCATAGTTGCATG-GCTGTGTGGATGTAAGGTACCTGAGTCTCAAGCGGGAGACTC-CACTGTGGACCCCGTCCCTGGGAC-CAGAGACTTCTCTGCTGTAGAC-TTTCCAAAGTAGGAGTTTCCAGCCCCCAACCCTTGGCA-AGGGCATCTC-AGT--------------GGAGATGACTACCTCCACCCCAGGCCCTAACACATCCTCCTTCTAGAGTCTCAGAGCCTCTGTGTGGCCATGTCAGCAGCCAC----CGGGCTTAAGGATCACCCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45391797 556 + 49145316 CCCCCGTGCTGGTACCCCATGGGAGTAGGAAGCTTCCTCCACCCGGGTTCTGGTTCTTATACT-GCG-AGGTGGGGGGCGCTTCCCTCTAGGGCTGTACCTTCT-CTCCAGGGTGAGAACCCTTTCTTGCTGTTGCCTGCCCCAGGAAGAAGGTTCTTGCTATCCTTGGTATTGGTACAG-CTGCTCTCTTGGATTTGAAATGTCCACGCCTGTGTGTGTGTCCCCACCATAAGGCTGAGGACTCCTCTTGGATGCAGGTGCCCCCAGCTAATGCTTCT--AACCCCCTCTTGATTTCTCACTGTATGGGGTGAGGTAGAGGTTCCTG-GCTGTGT-GATGTCAG-TGCCTGAGCCTCAGTTGGGAGACTC-CACTATAGTCCCCGTCCCTGGGAC-C--AGACTCCTC----GTGTAC-CTTTCAAGGTGGGGGTTTCCAGCTCCCCACTCTTGGCA-TGTGCATCTC-AGT--------------GGAGATGACAGCCTCCACCCCAGGACCTAACATATCCTCCTTCCAGAGTCTCAGGGCCTC--TGTGGCCACATCAGCAGCCAC----CCGGGTTAAGGATCACCCTTCA i calJac3.chr22 C 0 I 723 s mm10.chr7 3646731 505 + 145441459 CCCA---ACTGGCACCCTGTAGGACTGCTAGCTCTCCTCA--CCG------GAGTCTTCTGCT-GTGTAAGG-GGTAGCCTTTCTCCCTGCAGTTGTGTTGTCT-TTGTCGGGTAGG----------TGTTGTCACCTGCC----AGGTAAAGTCCCTGCCTTCTTTGCTATTGGCATCATCCCCTTTCTTGCGTTTGAGATGGCCACACC---ACCTATGTACCCAGTGTGAGGCT-AGGAT-ACTCTTGGGTGTGGGTGCCCCTGGCTAGTGTGACT---CCTCCTTTGTGGTTTTTCTGTG--------AAGTTATGGTTTCTTGTTCTGTGT-------------CTGAGACCTGGGTGAGAGA--C-CACTGTGGTCACTTTGCTTGGGAC-TAAAGA--GCATAAGGGGTGAC-TTTTCAAGGTGTCAGTTT----CTCCTTACCTTGGTTTTTGGGCCTCTCTAGG--------------GGAAACAGTTACTTCTA-AGCAGGGTCTACTTTATTTACC--------TCAGAGAATCTTCCTGTGGCAGTGCCAGCATCCTCTCCACTAGGTTCAAGTTCCACTTTGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19609040 484 - 122678785 CCCAGGTACCGGGGACCCCTGGGAGCCTGAGGCCTCCTAGGGCTGA-----GGCTCCCCTACCAATG-AGAC-ATGTGCACTTTGCT-GGGGGGTGTGCTTTCTCCTCCAGGGCAAGGAAACTTTCTCGGTGTTGCTTCCCCCAGGCAGCGGGTTCCTGCCCCGGTGGGCCCTGGCCCGT-GT-------TAGGTGT-AGGTGCACAGGGCAGCGCTTCTGCCCCTTCCTGCATGCT----------CTCAGGTGTGGCT--------CTAAGGCTTCCA-----CCCTCTCAG--------------------------------CG-GCTG------------------------------GGAGACCCTCGCCGTTG--TCAGTCTGCGAAGCACGGAGTTTCCTCTGCTGTAGTCTTTTCCCCGGGTGGGGTTCCCAGGCCCCCATCCTTGGTG-TCAGCCTCCC-TGTGTGTGTGTGTGTGGGGGGGTGACTACCTGCACCCTAGGCTCTA-CATGTCCCTCCTCCAGGGTCTCAGGAGCATTGTGTGGCTCCGTCAGCAGCCTC----CTGGGCTAAGGATTGCTCTCCA i canFam3.chr1 I 263 C 0 a score=7625.000000 s hg38.chr19_GL949753v2_alt 114802 3 + 796479 ACA s panTro4.chr19 59048785 3 + 63644993 ACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925045 3 + 60714840 ACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690727 3 - 106955855 ACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978767 3 + 64156825 ACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003481 3 + 59248254 ACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109755 3 + 51301725 ACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816931 3 + 50890351 ACA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3647236 3 + 145441459 GTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19609524 3 - 122678785 GCG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45392353 723 + 49145316 I a score=2016699.000000 s hg38.chr19_GL949753v2_alt 114805 688 + 796479 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCGCCCC-GCCACCCGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAAGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC s panTro4.chr19 59048788 690 + 63644993 TCACTTCTCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTGCCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGA-CCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCTTGAGATGAAGTCTGGGGGGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CACCTCCCCCCCCCCCCGCCACCCGCCTTGTGGGTCCCTTCCCCTGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTCGAGACTCAGGCTCCAGCTTCCTTTCTCTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GGGGAAGGTGTTGTCTCTACTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925048 677 + 60714840 TCACTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGTG---TATGA-CAAAGACCACTCTGTGGGCACATGACGGCCCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATTATCTTCCCTGAGATGAAGTTTGGAGAGCTCTTCTTTACTG--GTTTTGGCTCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACGCCCC-------CGCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGTCTCCTCCTGGGCTGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGAGA------------GTGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAGATGGGGCTCTTTCTTCTCTGGCGGCGTCTCTGCTTTGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTTCTTTGCT----GGGGGGACCAGAG--GTACAGATAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GC-GAGGAAGGTGTTCTCTCTGCTGTGGC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102690730 677 - 106955855 TCACTTCCCAGAGCTCCTTGCTGCCGAGGCGGAAGCTCTCCCAGATCAAAGGCGTCTCATGA-CAAAGACCACTCTGTGGGCACATGACGGCGCC------CAAGGTTAAGGACCACCCGGTGTTAGTTTCCCAGGGCTGAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGATGGAGTGTGGGGGGCTCTTCCTTACTG--GTTTTGGCCCT-GATTTTAGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCCC--------GCCTTGTGGGTCCCTTCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAAT---CTCCTGGGCCGAGGTTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGTTGCTGGAGCACAGGTTCTTC-ACA--------------CCTGAGA------------GTGGACCTGTGATCACCACC-TTCCTTGGAAGATCT-----------TGGTGGATGCCCCCCTGACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCGTCTCTGCTTCGAGACTCAAGCTCCAGTTTCCCTTCTGTCTGGTCCTTTGCT----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGG---------ATTTTCTTA-----GCGGGGGAAGGTGTTGTCTCTGCTGTGGC----------TAAGGCCCTAGCCTCTCTAGGGGAGAAGTACCCTGGGCCTCTGGCACTTGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59978770 674 + 64156825 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCT-CCAGACTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGCAGCGCAGGTTCTTC-ACG--------------CCTGGGA------------GCGGACCTGCGATCACCGCC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55003484 675 + 59248254 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGTG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCT-----CA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTCG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCCGCGGACTGCAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCAGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----AGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTT------GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTATAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47109758 676 + 51301725 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCGCCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAagcctcctgc-----ccctccctcctcgAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATGTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCtgct-----ca---ccccaccccac--------cccttgtGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGCTCCCAGATTCCTCAGTGCTCTTG-----------GAGAGCCTTTGCTGCTGGAGCACAGGTTCTTC-ACG--------------CCTGGGA------------GTGGACCTGCGATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGATGCCCCGCGGACTACAGCAAATGGGGCTCTTTCTTCTCTGGCAGTGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTTTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46816934 692 + 50890351 TCAGTTCCCAGAGCTCCTTGCTGCAGAGGCGGAAGCTCTCCCAGATCAAAGGCTTCTCATGA-CAAAGACCACTGTGTGGGCACATGACAGCCCC------CAAGGTTAAGGACCGCCCAGTGTTAGTTCCCCAGGACTAAGCCTCCTGC-----CCCTCCCTCCTCGAGT------------CTTTGTGTGGTGGTATCATCTTCCCTGAGGTGAAGTTTGGGGGGTTCTTCTTTACTG--GTTTTGGCCCT-CATTTAGGCG--TGTTGGCTCCTGTGAGGCTGGTGTCCTGCTCACCCCA---CCCCACCCCAC--------CCCTTGTGGGTCCCTGCCC-TGTGGGGATGTGTGTTCCTCTTGGGTAAGT---CTCCTGGGCCAAGGGTCCCAGATTCCTCAGTGCTCTTGAGAGAGCCTCAGAGAGCCTTTGCTGCCGGAGCACAGGTTCTTC-ACA--------------CCTGGGA------------GTGGACCTGCAATCACCACC-TTCCTTGGAGGATCT-----------TGGTGGACGCCCTGCTGACCACAGCAAATGGGGCTCTTTCTTCTCTGGCAGCGTCTCTGCTTCGAGACTCAAGCTCCAGCTTCCCTTCTCTCTGGTCCTTTGCC----GGGGGGACCAGAG--GTACAGACAC-----CCTCATGATATAGGA---------ATTTTCTTA-----GG-GGGGAAGGTGTTGTCTCCGCTGTGAC----------TAAGGCTCCAGCCTCTCTAGGGGACAAGTACCCTGGGCCTCTGGCACTTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393076 672 + 49145316 TCACTTCCCGGAGCTCCTTGCTGCCGAGGCGGAAGCTCTTCCAGATCAAAGGCGCCTCATGA-C--AGACCACTCTGTGGGCACAGGAT-GTCTC------CAAGATTAAGGACCGTCCGGTGTTAGCTCCCCAGGACAGAGCCTCCTGCCCCCTCCCTCCTTCCTCAATT------------GTTTGTGTGGTGGTATCATCTTCCCTAAAGTGAAGTTTGGGGG-----TCTTTACTG--GTTTTGACCCC-CGTTTTAGCA--TGTTGGCTCCTGTGGGGCTGGTGTCCTCCT-----CA---CCCCACCCCTT-------AGCC---TGGGTCCCTGCCC-TGTGGGAATGAGTGTTCCTCTTGGGTAAGTGTCCTCCTGGGCCAGGGTTTGCAGACTCCTCAGTGCTACTG-----------GAGAGCCCTTGCCGCCAGAGCACAAGCTCCTCTGTG--------------CCCAAGA------------GTGGACCCACAATTGTTAGC-TTCCTTGGAGGATCT-----------TGGTGGATGCCGCCC-GACTACAGCAAATGGGGCTCTTTCTTCTCTGGTGGCATCTCCGCTTCGAGACTGAAGCTCCAGCTCCCCTTCTCTCTGGTCCTTTTTA----GGGGGAACCTGAG--GTACAGACAT-----TCTCAGGCTACAGAG---------ATTTTCTTA-----GT-GGGGAAGGTGTTGTCTCCAC--TGGC----------TAAGGCTCCAGCCTGTCTAGGGGACAAGTACTCTGGGCCTTGGGCACTTGCTC i calJac3.chr22 I 723 C 0 s mm10.chr7 3647239 586 + 145441459 CTGCTTGCCACCATCCCTGGCTTCA---GTGTGAGCCCTCTTAGCCC-----TGTGCTATGCTCCAAGATGCTTCTGTGGTCACTTAGCAGTACCAGGCTTCAAAATTAAGG--------------------------------TTGTAC-----CCCT---TCATCAGGT------------CTCTGAATGATGGC-TTGGCACCTGTGGTGAGAAGTTCTATAGATTGTTCTGT------------------------------TGTTGGCTCC-----------TATTTTGAG-----TA-----------CTT--------GATTTGAGGATTTGCTACA-GCTGTGGACAGATGATCCTAATGATTTTGC---TTCCACAGACG-----CCCAGCTTCCTCCATGCTGTTT-----------GAGACCCTTCACCATCTATACATGTATTCTGT-GTGAAGGTGTTTGCTTACCTCACA------------AGGGCCCTGTAGTGATGGCC-TCCTCGAGCAGGACC-----------TGGGAAGTG----------------GGATGGG---CAGTCTTCTGTGGTGGCACCTCTACTTTGAGGCTCTAGCACTTG-----------------CCTCTGTT----TGCAGAACTTGTGCAGTCTATGCACCTTCTCCTTGTGAAGTGGGGCTTGGTTTTGTTTTGTTGTATGTGG-AGAGAAGGTATTGCCTCCACTCTGGC----------TGTGGCTCCAGCCTC--TAAAACACAAA-GTCCTGGCTCTGTGGGCCTTGTTC i mm10.chr7 C 0 I 756 s canFam3.chr1 19609527 637 - 122678785 TCACTTCCCAGTGT--------------GCCAAAGCT--------------------------CCTGGTCCACTGTG----------ACAGCCCC------CGGGGTTAGGGA------------------------CTAGGCTTTCTGC-----CCT--CCTCCCCGGGTCCCCGGCAAGGCCTCTCTGTGACTGTGCCCTTTCCCCGGAGCTGAGGTTTTGGGGGTTGTCCATGATTGTCATTTTGGTCCTGCATTGAAATGGCTGTTGCCTCCCATGGGTCTGGCGCACTACT-----TA---CCCCAACCCCA-----------GAATGGGCTCCTG----GGGAGGGATGAG------ACTTGGTGAAGC---CTCTTGGGCCAGGGCTTCTTGTTTCCTCAGTTATGTTT-----------GAGACACTTTGCTATGAGCGTGGGAGCTCTTTGGTG--------------CCTGAGATCCCCTGTCTCGGTGGGCCTACTGTGGTTACCTTTTCCTTGAGGATCCCCCAGGAGCCATGGGGGTTCCCAGCTCTATTA----GAATGGGGCTTTTCCGTT----GTGGCACCTCCACTTCAAGGCCCAGGCTCCAGTTCTCTTTATCTCTGGTCCCTTGTTTCAGGGTGGGGGAGGGA--GAGCATCTTT-----CTTCAAAGGCAGGGG---------CTGTTGCTCCC---AC-AGCAAAGGC-TCCTGTCCACTGTAGCACCCAGCCCAGAAGGTGCAAGTACCCAGAAGGTGCAAGTACCCTGGGCC-CTGGTGCCTCCCA i canFam3.chr1 C 0 C 0 a score=257185.000000 s hg38.chr19_GL949753v2_alt 115493 92 + 796479 CTTCTCTGTGGAGGAGCTGCCTCCTCACTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT s panTro4.chr19 59049478 92 + 63644993 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCAACTTCGATGTCA----CACTGTTCTGTCTGAAACATCACCTCCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925725 92 + 60714840 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGTCAACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691407 96 - 106955855 CTTCTCTGTGGAGGAGCTGCCTCCTCTCTGGGTCTCAGCTGTAGTCGACTTCGATGTCACGCTCGCTGTTCTGTCTGAAACATCACCTCCCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979444 92 + 64156825 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004159 92 + 59248254 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110434 92 + 51301725 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCTGACTTCGATGTCA----CGCTGTTCTGTCTGAAACATCACCTCCCTGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817626 92 + 50890351 CTTCTCTGTGGAGGAGCTGCCTCCTCGCTGGGTCTCAGCTGTAGCCGACTTCGATGTCA----TGCTCTTCTGTCTGAAACATCACCTCCCTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393748 71 + 49145316 CTTCTCTGTGGAGGAGCTGCCTCCCC-------------------TGACTTTGATGTCA----CATTGTTCTGTCTGAAGCATCGCCT--CTGGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610164 47 - 122678785 -----CAGATCCAGGGTTGTCTTCCC--TGGGCC-----------------------CA----AGATGTCCTCTC---------------CTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3647825 756 + 145441459 I a score=2171598.000000 s hg38.chr19_GL949753v2_alt 115585 726 + 796479 TAGCGCTCTTGTTCCCCTC---------CTTCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGTG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAACTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCTGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGGCTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt s panTro4.chr19 59049570 726 + 63644993 TAGGGCTCTTGTTCCCCTC---------CTCCTGGCTTGTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGCG-G----GTATTCTTCCTCTGCACTAGGATACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCGTCACCTGCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGGCCTCTTCTCTCTCG-GGGCTGGGGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTGAGCTCTGGTGTCCAGGCCCT---TGCCTTGTGTGAGCTCCCTGGGTCAAAGGGGCTTTCCCCTCCTCAGCCCGAATCCCCACTGTGGCACCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTAGAGA-----------------TTCCCCA-GGTAGGGCGTGATAGCTGA-------CCTGGGCGGGGACTGCTGC-------GGCTTTCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAATTCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTATCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAGAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCATATcc----------gtcc-ca---tatggttgctgctagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55925817 726 + 60714840 TAGGGCTCTTGTTCCCCTC---------CACCTGGCTTCTGACCCCTCCAGGACTTCGTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTATTCTTCCTCTGCACTGGGATACCAGTCCTTTCCATGTGGAGACACAGGGAGGGCGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGCGCTGGTGTCCAGTCCCT---TGCCTTGTGTGAGTTCCCTGGGTCAAAGGGGCTTGCCCCTCCTCAGCCTGAATCCCCATCGTGGCGCCTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGG-----------------TTCCCCA-GGTAGGGCGTGTTAGCTGA-------CCTGGGCGGGGGCTGCTGC-------CGCTTTCTTTAGGTTGGGGCTTTTACCGAGGAGACTTAAGTTCTCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCTGCGG----TGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTGCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102691503 727 - 106955855 TAGGGCTCTTGTTCCCCTC---------CACCTGCCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGCACTAGGGTACCAGTCCTTTCCGTGTGGAGACACAGGGAGGGCATCACCTCCCTAAGGTGTTGATTGCCTTGTTGAGGGGTGTAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCGTGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGTG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTCAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACGTCAGCGTTGGTGTCCAGGCCCT---TGCCTTGTATACGCTCCCTGGGTCAAAGGGACTTGCCCCTCCTCAGTCTGAATCCCCTCCATGGCACTTTCTCCTGGGTCCTTTTGTTGGTTGCTTTGCCTTCTTGGAGA-----------------TTCCCCA-GGTACGGCATGTTAGCTGA------CCCTGGGCGGGGGCTGCTGC-------CGTTTTCTTTAGGTTGGGCTTTTTACTGAGGAGACTGAAGTTCCCACAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCCCCGG----GGTTGG-----GAAAATTCTCCCTGG---GGGTAAGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ca---tatggttgctgctagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59979536 731 + 64156825 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004251 731 + 59248254 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-G----GTGTTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCCGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTCGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TACGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCTCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCTTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47110526 731 + 51301725 TAGGGCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACAGT--GTGG---------TCTCCTCTCTGGG-A----GTATTCTTCCTCTGTGCTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCAGGACCCTCTGTTGGGTTCTTGGGATGGAAAGAGGGAGCG---TAAGCTCTCGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTGTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGTGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCGACAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTAGGGGACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACCC----------GTCC-TA---TATGGTTGCTGCTAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46817718 730 + 50890351 TAGGGCTCTTGTTCCCCTC---------CAGCTGACTGCTGACCCCTCCAGGACTTCCTTCTCTTGCTGCCACCGT--GTGG---------TCTCCTCTCTGGG------GTATTCTTCCTCTGTACTAGGGCACCAGTCCTTTCTGTGTGGAGACGCAGGGAGGGTGTCACCTCCCTAAGGTGTTGATTGCCTTGTTTAGGGGTGAAGACCATGAGACCTCTTCTCTCTCT-GGGCTGGAGCACCTGCCCATGACCCTCTGTTGGGTTCCTGGGATGGAAAGTGGGAGCG---TAAGCTCTTGTTTCACATTCTTGTTCCCCCTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGGTGTTGGACTTTGGTGAGGATCCCTGCACACCTCAGGGTTGGTGTCCAGGCCCT---TGCCTTGTATAAGCTCCCTGGATCAAAGGGACTTGCCCCTCCTCAGTCAGAATCCCCACTGCGGCACTTTCTCCTGGGTCCTTTTGTT-GTTGCTTTGCCTTCCTGGAGA-----------------TTCCCCA-GGTGTGGCATGTTAGCTGACTCTGACTCTGAGCGGGGG-TGCTGC-------CTTTTGCTTTAGGTTGGGCCTTTTACTGAGGAGATTTAAGTCCCCTCAAGTGTAAG--GTAGCA-------CCCCTACCTATTACCACCCAGAATGGGTCCCAGCAG----TGTTGG-----GAAAGTTCTCTCTGG---GGTTGGGGTACCAGCCCTGT---CCTTT----ATGGGCTTCTTGTTCTAAAGCACACcc----------gtcc-ta---tatggttgctgctagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45393819 727 + 49145316 TAGGCCTCTTGTTCCCCTC---------CAGCTGGCTGCTGACCTGT-CAAGACTTCCTTCTCCTGCTGCCACGGC--ATGGGGGTTGTTCTGCCCTCTCTGGGGG----GTATTCTTTCTCTCCACTAGGGTACCAGTCTTTTCCATGGGGACACGCAGGGAGGGTGTCACCTCCCTAAGATGTTGATAGCCTTGTTTGGGGGTGTAGCCCATGAGACCTCTTCTTTCTCGAGGGTGGGAGCGCCTGCCCATGCCCCTCTGTTGAGTTCTTGGGATGGAAAGAGGGGGTG---TAAGCTCTGGTTCCACATTCTTGTT-CCCTTA-TGCAGTAAGAGGCTTTTCTGTGTTG--GGCTGTTGGACTTTGGTGAGGATCCTGGCAAACCTCAGGGTTGGTGTCCAGGCCCT---GGCCTCAT---AGCTCCCTGGATCACAGGGACTTGCCCCTCCTCAGTCTGAGTCCCCTCTGGGGCACTTTCTCCTGGGTCTTTCTGTTGGTTGCGTTGCCTT------AG-----------------CTTCCCT-TGTATGTTATGTTGGCTGA------CTCTAGGCGGGCGGTGCTGC-------TGTTTTCTTTAGGTGGGGCCTTTTACTGAGGAGATTTAAGTTCCCTGAAGTTTAAG--TTAGCA-------CTCCTACCTGCTACCA-CCAGAATAGGTCCCTGCGG----CGTTGG-----AGAACCCTCAGCAGGGCTGGTTACGGTGCCAGGCCTGT---CCTTT----ATGGGTCTCTT-TTCTAAAGCACCCTT----------GTCC--A---TAGGGTTGCTGCTAGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3648581 711 + 145441459 -tggcccTTTGTTGCCCCTGTTTTTGGGTGCCTTGCTTCTGGTCCCTTTAGAACTTCTGTCATttgttgttgttgttgttgt---------tgttgttgctgtG-GCTTATTGCTCTTGCTGCAAGCCTGTGTCACCGCTTCCTCTGTGT---------------------------TGCAGTCCCAGCCACTTTGT---GGAGCGTGG---ATAAGGCCTCACCTTACTTA-AGGTGGCAGTGCCTGCCCAGAACCCTCCTACAGGCTCTTGGGACAAAGTGA-GCAGTGTAATAAGCTCTTGTTTAACATTCTTTCCTTCCCTGCTATAAAAAGAGGCTTCTCTGTGCTGATGGATATTAGA-----GCCAAGACTC----------------TAGAGTCAAGATCCTGAATACCTCCTGCAGGGTCCCTAGATCAGGGGTACTTAGTCTACTTCAG------TCTCCTCTATGGGGCTCTTTGCTGAGTTCTTTTGATGGTTGCTTCATCTTCCTGGAAA-----------------TTGCCTGCTGTATGGTGTGTCAGCTAA------TCCTCTGTTGAGAGTGCTGTGTGCGTGCTCTCTCTTTTTGATAGATC-----CTAAAGATATTTAAGTCCCCAC-AGTTTGAG--GTGCCA-------CCCATAGCTACCTCCCCACAAAGTGGGACCCTACAG----AGTTAATTTTTTAAATCCCTTTTCAG---AG--AAGGCACTAGCCCCAT---CCACTGTAGGTAGGCCTCTTTTTCTGAATCTGCTCCCTAATGCAGTATCC-CATGCTATGATTAGTATAAGT i mm10.chr7 I 756 I 329 s canFam3.chr1 19610211 522 - 122678785 GAGGTCTCTTGTTCCCCTG--------GCACCATGCTTCTCACTCCTTCAGGACT------------TGCCACAGT--CTGC---------TCCCCTCTT--GG-G----GTAT----------------------------------------------------CACCTCCCCCCTGAGCTGTGG------------------------CATG---CATCCTCTCCCTCC-GGGCTG---------------------------------------------------------------------------------CCCCTG-GGCAGTAAGAGGCATTCCTGTGTTG--GG-------------------------------------------GTCCTGGCCCT---CTCC-----CAAGCTCCC-AGGCCAAAGGCTCTT---CCATTTCAGTTTGG-TCCTCTCTGTGCAACTGTCTGCTAGGTGCTTCTCTG-GCTGCCT--CCTTTTTGGAGGGATCTTGTGTGGGGATCTGGCCCC-ACTGTGGTGTGTCGGCTGG------CCTGGGGCCGAGGGTGGAGC-------CATCATC--TGGGTTGGCTCTTAT-----GGAGATGTATGCTCCCTCAAGTCTGAGCTGTGACATCCCTCTCCCCCGCTCTTCAGTGTCCAGAATGGGCTCTCGCGGAGGATGCTGG-----TGCAGACAGCCTTGG---GGCCTTGGTCCTTCTCCAGCATACTCTC----AT--GCCCTGTGCTTT----CATACGT----------GTTCTCA---TACGCTAGCCGTTAGC i canFam3.chr1 C 0 C 0 a score=462741.000000 s hg38.chr19_GL949753v2_alt 116311 157 + 796479 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC s panTro4.chr19 59050296 157 + 63644993 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagtttctccattacacttgccacatttcagatgttcagtggccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926543 157 + 60714840 cacatgtg-gtgattagtaactagttaaaaatgaaaaattcagttcctccattacacttgccacatttcagatgttcagtggccagcagata-tgtgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692230 157 - 106955855 caaatgtg-gtgattagtaactagctaaaaatgaaaaattcagttccttcattacacttgccacatttcagatgttcagtgtccaacagata-tgcgcaaatagagtgtttccagcattgc--aaagttctgttggatagcactgTTTGCCAGATGTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980267 157 + 64156825 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55004982 157 + 59248254 cacatgtg-gtgattaataactagttaaaaatgaaaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataaatagagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111257 157 + 51301725 CACATGTG-GTGATTAATAActagttaaaaatgaaaaattcggTTCCTCCATTACACTTGCCATATTTCAGATGTTCAGTGGCCAACAGATA-AGCATAAATAGAGTGTTTCCAGCATTGC--AAAGTTCTGTTGGAGAGCACTGTTTGCCAGATGTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818448 154 + 50890351 cacatgtg-gtgattaataactagttaaaaatg-aaaattcggttcctccattacacttgccatatttcagatgttcagtggccaacagata-agcataa--agagtgtttccagcattgc--aaagttctgttggagagcactgTTTGCCAGATGTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394546 155 + 49145316 CACATGCG-GTGATTAGTAACTGGTCAAAGATGAAAGATT---GTTCTCCGTTACACTTGCCACATTTCAGATGCTCAGGGGCTGACAGATAGTGCACATGGACAGTGTTTCCTGCGTTGC--AGAGTGGTGTTGCACAGCGCGGTTGGCCAGATGCTCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19610733 134 - 122678785 ----TGTGTGTAATTGAAA------TAAAAATGCAAAGTTCTAGTTTTTCATAGT---------------GGTATTTAGAGAC--ATAGGTAGCATTTATAGGGAGCATTTCTGTCATCGTAGAAAGTGTTGTTGGATAGGGCTGTTGGTGAGGCAGTCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3649292 329 + 145441459 I a score=3495331.000000 s hg38.chr19_GL949753v2_alt 116468 1105 + 796479 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACACGTAGAGTGGGAGCGGCCCGTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTGAAGTTTTGGGTTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AAGCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATGTCTTGGTGGTTTGAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGCATGAGCGGGTTCAGCTCTTCACAGCTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTacacacacacac-acacacacacacacacacacacacacGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGC--CCAGCCCCTCTGAGTAGGAAGTGTGATTTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA s panTro4.chr19 59050453 1086 + 63644993 TTCTT---TGTGGGTGAGGACTCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGTTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TTCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCGTGGATCCCAGTGAACTGTGCTTTTCATTGTAGGCCCC-TCCCTGGAGGGGAAGA----GGGCAGTCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCCTAAGCCTCTCTTCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGGTATGTCTTCCCTTG------GACT-AAAGCTCCTTGGAGCTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTAAAGTTTTGGATTCCTGCCCTGAT-GGTCTATGTCTCCCTGACTCTAAATTACCAATCCACTTGCTATG-GGATTCCTCCATGAGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTATCTTCTCCCAGGTCTCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATTAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGGTCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGGGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTGGTTTTCCCCCACCCCCAATCTTTCTTCTCCTACCTACAGCTTACACACACACAC-ACACAC--------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGGCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTATTCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55926700 1100 + 60714840 TTCCT---TCTGGGTGAGAACCCTTTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTGGTCCTCAGTATGGGGCTGTTTCTGTCTTTAAAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----CGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTTTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGATTACTGCCCTGAT-GGTACATGTTTCCCTGACTCTAAGTTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGCGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCGAGGTCTCTCTTGGATACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGCTTCTTTGAGTTAGGAGTGTTATTTCCTTTGGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTT---CTACCTACAGCTTacgcacacacac-acacac----acacacacacacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCACCTCTGTGCCCAGCCCCTCTGAGTAGAAAGTATGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAACATGAC--TGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTTCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102692387 1075 - 106955855 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTACTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCAGGG----------TGCCC-TGCCCTGCACAAGAAGAGTGGGAGCAGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTGTAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCGCTGGTATCTCAGAAGTCTTCTTCTGAGGCATAAGCCTCTCTCCCCAGGGCTC---------GCCTGGTCTCGCTGTCAGGCCCTAAGGTGTGTCTTCCCCTG------GACT-AAAGCTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCAGGTAACTTCCTTTAAAATAAAGACGCTCCTCT----AAGTTTTGGATTCCTGCCCTGAT-GTTATATGTTTCCCTGACTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATCGGCTCCCTCACAGCTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGG--TCTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTATCAGCTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATGCA--CCCAT-CTGTATGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCGTTTTCCCCCACCCCCAATCTTTCTTCTCCTGCTTACAGCTTACACACACACAC---------------------------ACCCTTCTCTGTGAGCTGCCAGTTTCATTTGTCTCCTGACTTGTCTGAGGGATGACCTCTC------------CTAGCCATCTCTGTGCCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTCCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAACCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTCTAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59980424 1094 + 64156825 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55005139 1094 + 59248254 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTACAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAATAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCC-GGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGATGCTTCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATTACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCCTCTTATCTCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acacacaTGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47111414 1093 + 51301725 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGG----------TGCCC-TGCCCTGCACAAGTAGAGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTGTTCATTATAGGCCCCCTCCCTGGAGGGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAACCTCTCTCCCCAGGGCTC---------CCCTGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGTTCCTTGGAACTCCCTTTTGACCTCAGTCTTCTCTAGGTTCCatgtaatttcctttaaaataaagatgCTCCTCTTTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCCTGTTTCCCTGAGTCTAAATCACCAATCCACTTGATATG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAACTGTGGTACCTTTGCACCCTCTTA--TCTTAGTAAGATTTCTGTCTTCTCCCAGTTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTATTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGTTCAGCTCTTCATAGTTTTCGGCATCTCTGCTTGCCGTcattttcccccacccccaatcttTCTTCTCTCACCTAcagcttacacacacacacaacacac------------acgcacacgcccTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGGATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTAATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46818602 1096 + 50890351 TTCCT---TGTGGGTGAGGACCCTCTTGGTGTGACTTCCCTCTGTATTGAGGCTCTTAGTCCTCAGTATGGGGCTGTTTCTGTCTTTACAGTAAGTGACTACTCCCGGGTGCCCTGCCCTGCCC-TGCCCTGCACAAGTAGTGTGGGAGCGGCCCCTGGATCCCAGGGAACTGTGCTTTTCATTATAGG-CCCCTCCCTGGA-GGGAAGA----GGGCAATCTCCACTGGTATCTCAGAAGTCTTCT----GAGCATAAGCCTCTCTCCCCAGGGCTC---------CCCGGGTCTCGCTGTCAGGCCCTAAGATGTGTCTTCCCTTG------GACT-CAAGCTCCTTGGAACTCCCTTTTGACCTCGGTCTTCTCTGGGTTCCATGTAATTTCCTTTAAAATAAAGACGCTCCTCTCTTTAAGTTTTGGGTTCCTGCCCTGAT-GGTGCATGTTTCCCTGAGTCTAAATGACCAATCCACTTGATACG-GGATTCCTTCGTGTGTGCAGATTGGCTCCC-CACAGCTGTGGTACCTTTGCACCC-------TCTTAGTAAGATTTCTGTCTTCTCCCAGGTCTCTCTTGGGTGCTGCCTTCTGCCCCCAAATCTCT--AACCCTTCTTGGTGTCAGTTTCTTTGGGTTAGGAGTGTTATTTCCTTTTGGTTTAAGGATCCTGCTCTGGAATAAATTTCTTGGTGGTTTAAGTCC--CTTCTACTTGGCATTCAGCCCTGT-CTGTCTGAGTGGGCTCAGCTCTTCATAGTTTTCGGCATCTCTGCTCGCCGTCATTTTCCCCCACCCCCAATCTTTCTTCTCTCACCTACAGCTTacacacacacacaacacac------------acgcacacGCCCTTCTCTGTGAGCTGCCAGTTTCGCTTGTCTGCTGGCTTGTCTGAGGCATGACCTCTT------------CTAGCCACCTCTGTACCCAGCCCCTCTGAGTAGGAAGTGTGATCTGCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCAGCATGACTTTGTCCTGCTCTGAAAAATCTTTTTGAGTGTGATCTGGGGAGAAGGTACTCCATGCTACAGGAATTTTCCACTTCCTGAGTC-AGAGGCACACAAAAAAGTATGTAACTTTTCTTGTTTCAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45394701 1049 + 49145316 TTCC----GGTGGGTGAGGACCCTCTTGGTGTGACTTTTCTCTGTATTGAGGCTCTTATTCCTCAGTATGGGGCTGTTTCTGCCTTTACGTTAATTGACTACT-CAGGG----------TGCCCTTGCCCTGCACTAGTAGAATGGGCACAGCCCCTGGATCTCAGGGAACTATGCTTTTCATGATAGGCCCCCTCCCTGG--GGGAAGA----GAGGAACCTCCGCTGGTGGCTCAGATGTCCTCT----TAGCATAAGCCTCTCTCTCCAGGGC------------------------------CCCTAAGGTGTGTCTTCCCCTA------GACTAAAAGCTCCTTGTGACTCCCTTTTGACCTCAGTCTCCTCTGGGTTCTATGGAACTTCCTTTAGAATAAAGATGCTCCTCTCTTTAAGTTTTGGGCTCCTGCCGTGAT-GGTGTATGTTTTCCTGGGTCTCTATCACCAATCCACTTGATACG-GGATTACTTCGTGTGTGCAGACCGGCTCCCTCACAGCTGCGGTACTTTTTCAGCCTC--A--TCTTGGTCAGATTTCTCTCTTCTCTCAGGTCTGTCTTGGGTACTGCCTTCTGCCCCCAAATCTCT-----CATCCTTGGTATCAGCCTCTTTGGGTTAGGAGTGTTATTACCTTTTGGCTTAAGGATTCTGTTCTGGAATACATTTCTTGGTAGTTTAAGTCA--CTTCTACTTGGCATTCAGCGCTGT-CTGTATCAGTGGGTTCAGGTCTTCAGAGTTTTAGGCACCTCTGGTCTTCACTG-TTTCCCCCACCCCCAGCCTTCCTTCCCTCACCTACAGCTTACAGACACACAC---------------------------GCCCTTCTCTGTGAGCTGCCAGTTTCATTTGCCTCCTGACTTGTCTGAGGGGTGGCCTCTC------------CTGGCCACCTCTGTCCCCAGCCCCTCTGAGTAGGACGTGTGATCTCCAGGGCTAATGCCTTCAT-CCCAGTCATC-AGCTGTGTGCTGCGTGACTTCGCTCTGCTCTG-AAAACCCTTTTGAGTGTAGTCTGGGGAGAAGGTGCTCCATGCTCTAGGAATTTTCCGCTTCCTGGGTC-AGAGGCACACAACGAAGTGTGTATCTTTTCTTGTTTCAACA i calJac3.chr22 C 0 C 0 s mm10.chr7 3649621 914 + 145441459 TCCCT---TGATGTTAAGGACCCTC--AATCTGGCTACCCTCCAGGTTGAAACCCTTGGTTCTGGTAGTGGAG------CTGCCTTTATAGTTAGGAGCTATATTGGGG----------CACTCTTGCCTTGTATCAG----------------CCTAGTTCT--GAGAGCCTTGCTTGATATTGCA-------CCCATGGGGGAGAAGGTTACATACAACTTGTGCTAGGAACTCATAAACCCTCT----TAG----GGTCTTCCTCTCCAGGATGC---------CCT--GTTTCGGGGTCAACTTTTGTAGTGTGGATTTCCCTGCCAACCGACC-TCCTCTCCTCAG-----TCCTTTGTCCTCAGGCCCTTCTGAATTAAACTCTGCTTCCTTCAGAATAAAAATAGGTGTCT---------TTGA----CCTCCCTGATGGGTTCATGTTT--CTGAGTCTAAATTGCCAGTCTATCTGATGTG-GAACTCCTCCATGTGTGCAGATCTGTTCACTCATAGCTAAGGTTCTT------CTCTTTA--TCTTTTTGAGATTTCTATCTTCTCATCGCCCTC-CTTGAGTGCTGCTTCCTGCTTCCAAGTTTCTATAGCCATTTTTAGTGTC---------------------------------------GGGCTTCTGCTGTGGAATAAATTTCTCGAAAGTGTAAGACC--CTCTTGTTTGATATCCTGCCTTGTCCTGTATGAATGGGCCTTGATCTTCATA-------------------------------------------TCTCTCTTCC----CCTTCAGCTCACAC-CTCTTAG------------------------------CCTTTCCAGGAGCTGCCAGCCTCATGTATTCTGTGACTTACCT--AGAGTGGCCTCTC------------TCAGTCACCTCTGCTCTCAGCCCCTCAGTTTAGAAAGTACCATTTCTAGGGCTAATGCTTCCAT-CCCAGCAGTCTACCTGTGTGCTGCTTG---------TGCTCT--------------AGTGTCATCTAGAGTGCAGATATTCTGTATTTTAGAAAATTTCTACTTCCTAAGTCAAGAGGCCCACCAATAAG-ATATACTGTTCTTTGTTTCAACA i mm10.chr7 I 329 I 117 s canFam3.chr1 19610867 844 - 122678785 -TCCTGGCTGTGGGTAAGGCCGCTCTTGGGCTTCCTGCCCT-----------------------------------------------------------------GGG----------CTCCC-TGCCCTGGGCCTG----------------------TCTCAGCCA------CACTTCAGGAGAGACCCCCTCTCTGGG------------GAGTGACCTC---------------------------TGGCATAACACTC---CTGCAAGGCTCGTGGATCCTCCCTGATCCTGGTGTC-GACCCTAAGTTGTGGCTT-CCTTG------GGCC-AGAGCTCCTGGTGGCTCCCCTTTGACCTCAGCGTCCTTTGGGTTGCATAGA----CTGTTAGGGTGAAGATGCCCCTCTCTCCTGGTCCTGG----CTG------T-GTTACCTGT--------------GTTACCACCACATCTGATACGTTAACTCCTTCGAGTGCACAGAT-GGCTCTCTCATAGCTGTGGTCCCCTTCCACCTTCCTG------------------------------GCCCTCCGGGGGTGATGCTTTCTACTCCCATGTGTCT--AAA---TCTTGGTATCGGTGTCTTTGGGTTGGG-----CCGTCTCTTGTGTTTTAAGGATTCTGTTCTGGAATGAA---CTTGGTGGTGTAAGGCCCTCTTCTGTTTGGGACCCAGTCCTGT-CACGACGGGTGGGTTTAGCTGTTCCTGATTCCAGGTATTTC---------CCATCTCCCGCTGCTCCCCCTCCTTCC-------CCTGCAGTTCTCACA---GCAT-CTGAAC---------------------TTTCTCCCTGAAAACTGTC--------------TCTGACCTGTCTGAGGGCTAACCTCCCCGAGTTAGGAGTCTAGACACCTGTGTGCCCTGCCCCTCTGTG-------------------------GGCCTTCATCCCCAGCACTC-AGCCATGGGCTGCTTGACT---TCTTGCTCTAAAATGTC--------TGTCATCTGGTGAGAAAGTATCCCGTGCTCTGGGTACTTCCCACTTCCTGGGTC-GGAGGTACACGAA-AAGTACATTTGTTTCCTTGTTTCAGCA i canFam3.chr1 C 0 C 0 a score=206362.000000 s hg38.chr19_GL949753v2_alt 117573 64 + 796479 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT s panTro4.chr19 59051539 64 + 63644993 AACTTATGGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927800 64 + 60714840 AACTTATAGGGTCCCCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGCGAGCCTCAGGAGAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693462 64 - 106955855 AACTTACAGGGTCCCCTGTTGGCCAGACAC-CATGCTGGGCAGTCAAGCGAGCATCAGGAGAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981518 64 + 64156825 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGTAGAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006233 64 + 59248254 AACTTATGGGATCCTCTGTTGGCCAGACAC-TGTGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112507 64 + 51301725 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819698 64 + 50890351 AACTTATGGGATCCTCTGTTGGCCAGACAC-TATGCTGGGCAGTCAAGTGAGCATCAGGAGAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395750 65 + 49145316 AACTTCTAGGGTCTCTTGTTGGCCAGACACTTATGCTGGGCAGTCACACGAGCATCAGGAGAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19611711 57 - 122678785 AACTTCCAGAG--------TGTTCAGACCCCTGCAGTGGGCTGTCAGGGCAGCATAAGTAGAACT i canFam3.chr1 C 0 C 0 e mm10.chr7 3650535 117 + 145441459 I a score=10173211.000000 s hg38.chr19_GL949753v2_alt 117637 2801 + 796479 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCACCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGGTCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAAATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCGGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAAGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--ATGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCACGC---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACCGTGGGGCCTTTGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGCCTAGTGATGACAGAT---ATCACAATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC s panTro4.chr19 59051603 2800 + 63644993 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCTCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCAGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCAGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCACATGCTCCCTCTTCTGAGAACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGC--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGAGTAGGGGTTGGGGGGG-TCCTCGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAACGCAAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagtttccgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGAAGGTCACCGGATTCTTGAGATCCCAAG-GGGCGGAGGCAGAGCGGCCAGACCCCAGAG-GTCCTCAAGAGAAGTAAGGTTTCTGCACCTAAGGGAAGTGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGC-GGAACCCTAGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAACAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTGGCAGCTGCACGC---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGACTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGGCCACAGAGTAAAAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGACAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACAGACTTGCTGAAACCAGAAAGACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGGGTCGGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGAG----ATTTGGAACCAAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTAGGAATCTGGGCTCTCTCAGGGATAAATGGGTAGGGTT--GGGGGTCTAGTGATGACAGAT---ATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GATTATCATTGTTACTGCTGGAGCAGGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-CGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTTAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGATGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55927864 2787 + 60714840 GGGGCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCTTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCGT-ATCTCTGGGTTTTTACCAGCCAGGGAATATGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGTGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGA-TGACTTCCTGCTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGGAGAGCACAGGAAGGTGGCTCAGGACCTCTGGGTGTTGACCAGC--AGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGGGTTCCTCCAGTCCCTAGC---ATAAGGAA--GAGTCACTGGA--------------GTGGGTGCTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCATCCCTCAGCTCCACAATGCAGCCAATGCGAACCAGAAAGAAAAGTATGAGGCTGACCTGAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGggg---------------cctgagggtagagggaactcggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcctgggtcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTGGGGAGGTCACCAGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAATGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTTTCTGTACCTAAGGGAAGGGAAGAGACAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAACAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACCTTTGGGATGGGGATGGGCATGGGAATGGGCTGGCCAGCCGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAAGAGCCGGGATTAGGGATTTGAGAG--AGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGAAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCATGAAGAGGAGCGATTTGGGGGAAGGTGAGTGCAGGTTGAGCTTGGACCACAGAGTAACAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTCGAAACCAGAAAGACAGGGAGGGGAGAGACGGGTCCTCAGGGAAGCTGTGGGTGGGAGAGTGTCAGGAAGTGGAAGATGACAGGGTCAGGTGTCAGACCCTGAGGGGTTTGCGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGAAGCGAGGCTTATGAATCTGGGCTCCCTCAGGGATAAATGGGTACGGTTG-GGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACGAATGGG------GGTTATCATTGTTACTGCTGGAGCAAGTCGG---AGGGGATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGGCT----------GTCAGGTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGG-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCAT-CTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102693526 2803 - 106955855 GGGTCTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTCCCCTTACCAGTCCCACCTACCTCACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGGGAATACGTGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCCTCTGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTGTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATA--ATCTGGGTCTTCAGAGAGCAGGGCACAGGAAGGCGGCTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATA-TGCAGATGCTGAGGACCTAAGAGAATCAGCTCTAAGATGGATTGGGGGTAGGGGTTGGGGGG--TCCTTGAGTCCCTAGC---ATAAGGAA--GAATCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTCAATTCTCTCCAT-CCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGCCTTTGTCCTGAGGGTAGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------CCCCAGTTCCCGGGTCCTGAGG---TCTGACTTTCTTGTTTTT-CCCATCTGCAGCGGCTAAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGAGCCTGAGTCCCAGAGAGGTAGGGAGGTCACCAGATTTTTGAGATCCCAAG-GGGTGGAGGCAGAGCGGCCAGACCCCAGAG-TTCCTCAAGAGAAGTAAGGTCTCTGCACCTAAGGGAAGGGAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCACGAGGCTCGGGTCCGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTTGAGAGCCCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTAGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGGCTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCGA-CACTTTtgggatggggatgggcgtgggaatgggctggccaGCAGGAG--GCCAGTCGTTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGAGCAGGGAGGGGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGAGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAAGGTGAATGCAGGTTGAGTTTGGGCCACAGAGTAAGAGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGG--CCCTGGTCCTAGGGAGAGCACAGTGGGTAGAGACAAGGCAGAACATGGAGAAGGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGTTGGGGTCCCAGGTTCTAAA-A-TCCAGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTACGGACTTGTTGAAACCAGAAAGACAGGGAGGAGAGAACTGGGTCCACAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGAAGATGACAGAGTCAGGTGTCAGACTCTGAGGGGTTTGGGAACCAGGGGCTT-TCGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACCGAGGCTAAGATGTTAAATCCTAAAGGGGCCTTGA-----GGGGAGGGCAGGAGCGAGGCTTATGAATCTGGGCTTCCTCAGGGATAAATGGGTAGGGTTGAAGGGGCCTAGTGATGACAAATATCATCACGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTGATCATTATTACTGCTGGAGCAAGTCGG---AGGGTATCTGTATGCCAGAGGCAGTCACAG-TGGTGGGCAGGCT-CAGCTGAGAAATCTGGGCT----------GTCA-GTGAGGTGCAGATGGAGGCCAAGTCGTGGGATGGCACAAGGACCTCT-GGGTCTTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAAGGTGTGGGGAGAGGAGA-----GAGCAGTGGGATCCCAAGATGTC--AAGGCTAAGATTGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCC-GAAGGGGCTGGCGTGGAGG---TT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59981582 2801 + 64156825 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcccagttcccggatcctgagg---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGCGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55006297 2801 + 59248254 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTGCTGCACCTGTAGCCATGTGCTCCCTCTTCGGAGGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTAACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATAGGCTCTAAGACTCATTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCAGTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGggggctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGACAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTTGGGA------------TGGGGATGGGCTGGCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCAGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACGGGATTGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCAGGGAGGAGGTCAGACAGAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCACCCAGAGGA--CGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGCTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGTTAC---------------AAACTGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTCTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTCGCTCCCGCTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATACCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTATGCCAGAGGCAGT--CAG-TGGTGGGCAGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTACAGAT-GAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCTACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCTACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47112571 2794 + 51301725 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATGCGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTTTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTTCCTACTGCACCTGTAGCCACGTGCTCCCTCTTCTGAGGACTGCTCTTTAGATGCCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGGGGCTGAGACCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGAAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTACATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTgggggtaggggttgggggg--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTACTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGACTGGGGGCCTGGACGCCTGTGTCCTGAGGGTTGAGGGAACTGGGAGAGTGGACTGCTGGGTCCCAGGGAGAAGGAGCTGTGGG------------TCCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCCCAGAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGGCCCTTAGTCACCTCCTTTCCCGCCTTTGAGAG-CCACCTGCCAACTA-CACTCTCTGCAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGgagggcctgggcctggcccagaagGTAGATCCTGcccagaaggagaaggaagaggttgGCCAGTGGCTCACGGTGAGTTGGGGTGGAGAAGAGGAGGTAAACTCTGAGGATCCTGAGCCCTGGGTGTAGGTGGGAACCCTGGCTGATggctttcctcttc-ctctccctcccctagaaTACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTTtgggatggggatgggc-tggggatgggctggCCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCTGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGcctgg---gtggggcagggaggaggtcAGACAAAATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGTGATTTGGGGGAATGGGAATGCAGGTTGAGCTTGAGCCACAGAGTAAGCGTGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAAGA--CACTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTAGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-AGGGTATGAGTTCAAAGGGATAC---------------AAACTGTATGGACTTGTTAAAACCAGaaacacagggaggggagagcTGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAACCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCCAAAGGGGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCTGCTGGGATAaatgggtggggttg-ggggaccTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGG------GGTTATCATTATTACTGCTGGAGCAACCTGG---AGGGTGTCCGTATGCCAGAGGCAGT--CAG-TGGTGGGC--------------------GGGCTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGtgtgggaagaggaaggagcagaGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCtccacaggggtcagggactgaGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46819762 2810 + 50890351 GGGACTGGTCTCTTGTCAGAT------------AGCAAATGCTTCTTTCCTTTACCAGTCCCACCTACCTAACTATGCTGACTAGGTCCAT-GTCTCTGGGTTTTTACCAGCCGGAGAATACGTGTTAATTCCTCTCCAATCTCTCCCAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTAGACTGACTT-CTACTGCACCTGTAGCCACGTGTGCCCTCTTCTGAAGACTGCTCTTTAGATACCTGCCGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTAC-GGGGCTGAGACCCTAATCTTATCTGGGTCTTCAGAGAGGAGGGCACAGGAAGGAGGTTCAGGACCTCTGGGTGTTGACCAGG--GGGAGGGGCTGCATATTGCAGATGCTGAGGACCTAAGAGAATCGGCTCTAAGACTCACTGGGGGTAGGGGTTGGGGGG--TCCTCGAGTCCCTAGC---ATAAGGAA--GACTCACTGGA--------------GTGGGTATTGGGACATCCCCTCCCACACTGACTTCTGAATTCCCTCCGTCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTgagggg-ctgggggcctggacgcctgtgtcctgagggttgagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------tcCCAGTTCCCGGATCCTGAGG---TCTGACTTTCTTGCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCGTCCAACGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCTAGAGCCTGAGTCCTAGAGAGGTGGGAAGGTCACCAGATTCTTGAGATCTCAAG-GGGCGGAGGCAGCACGGCCAGACCC--GAG-TTTTTCAAGAGAAGTAGGGTTTCTGGAGCTAAGGGAAG-GAAGAGGCAGCGGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGTCTGAGTGTCTGCTGTCCCTTAGTCAGCTCCTTTCCCGCCTTTGAGAG-CCCCCTGCCAACTA-CACTCTCTACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCTTACAGTAAGGAGGGCCTGGGCCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAAGAAGAGGTTGGCCAGTGGCTCACGGTGAGTTGGGGT-GAGAAGAGGAGGTGAACTCTGAGGATCCTGAGCCCTGGGTGTAGGCGGGAACCCTGGCTGATGGCTTTCCTCTTC-CTCTCCCTCCCCTAGAATACCATCGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAGGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCCCA-CACCTCtgggatggggatgggcatggggatgggctggTCAGCAGGAG--GCCAGTCATTT--AGGCTCCTGGGAGTTGGGGCCCGGATTCCTCAGGCGGACA-GGGCCAGCAGCCGGGATTAGGGATTTGAGAGACAGGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGGGGCCGGGAGGAGGTCAGACAGCATCTCAGGGTCCCCTGGGTGTCTGGGTAGACAGTGGGGCCTTCGTGAAGAGGAGCGATTTGGGGGAATGTGAATGCAGGTTGAGCTTGAGCCATAGGGTAAGCATGAGACCTGAAGGAC-ACCCATGGCAA---------------GAGGCCTCCTGGCATCCAGAGGA--TGCTGGTCCTAGGGAGAGCACAGTGGGTAGAGAC-AGGCAGAACATGGAGAAGGCAGAGAACTGGGC-CTGAAGGAAGAGAGGA----ATCTGGGACGAAGCTGGATATTGGGGTCCCAGGTTCTGAA-A-TCTGGGATTGT-GGGGTATGAGTTCAAAGGGATAC---------------AGATCGTATGGACTTGTTGAAACCAGAAACACAGGGAGGGGAGAGCCGGGTCCTCAGGGAAGCTGTGGGTGGGAAAGGGTCAGGAAGTGGACGATGACAGGGTTGGGTGTCAGATTCTGAGGGGTTTGGGAATCAGGGGCTT-TTGGGGAGATGATGGGTCCTTGAACAGAGCAGGG----ATTTGGAACTGAGACTAAGATGTTAAATGCTAAAGGAGCCTTGA-----GAGGAGGGCAGGAGCGAGGCTTATGGATCTTTGCTCCCACTGGGATAAATGGGTGGGGTTG-GGGGACCTAGTGATGACAAATATCATCATGATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATTATTACTGCTGGAGCAAGCTGG---AGGGTATCCGTGTGCCAGAGGCAGT--CAG-TGGTGGGCGGGCT-CAGTTGAGAAATCTGGACTCAGTTGAGAAATCAGGTGAGGTGCAGATGGAGGCCAAGTCATGGGATGGCACAAGGACCTCTGGGGTTGTTTAGAGGTTTCCAAGGACTCCTGGAGCCAGAAACGTGTGGGAAGAGGAGGGAGCAGAGCAGTGGGATCCCAAGATGTC--AAGCCCTG---TGGTCCCCACAGGGCTCAGAGGGTGGGTGGACCCCATACTGCCCCACCCCAGAAGGGGCTGGCGTGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAG-GAGGGGCC-AAGCAGGTGGTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45395815 2768 + 49145316 GGGGCTGGTCTCTTGTC----------------AGCGGAGGTTTCTTCTCTTTACCATTCCCACCCACCTCACTATGCTGACTAGGTCCCT-GGCTCTGGGTTTGAACCAGCCAGGGAATACATGTTAATTCCTCTCCAATCTCTCCTAGCAGCGTCCGTCTCCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGACAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTA-----ACTTCCCGCTGCACCTGTAGCCACGTGCTCTCGCTTCTGAGGACTGCTCTTTAAAT-CCTGCTGCCTGGGCAGGATTCTCACAGCCTTCTTCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAGCAGTTTGAAGATATTTGGCAGAAGGTACAGCGGCTGAGGCCCTAATC--ATCTGGGTCTTCAGAGAGGAGGGCACAGGAAACAGGCTCAGGATCTCTGGGTGTTGACCAGGGAGAGAGGGGCTACATA-TGCAGGTGCTGAGGACCTAAGAGAATCAGTTCTAAGATAGACTGGGGATAGAGGTGCGGGGG--TCCTCGAGTCCCTAGC---AT-AGGAA--GAATCACTGGA--------------GTGGGTACTGGGGCATCCCCTCCCACACTGACTTCTGAATTCTCTCCATCCCTCAGCTCCATAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGGCCTGGACGcctgtgtcctgagggtagagggaactgggagagtggactgctgggtcccagggagaaggagctgtggg------------ccccagttcccaggtactgagg---TCTGACTTTCTTTCTTTT-CCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAATGAGATCAAGGACAAGAGGCAGCTTATAGACAACCGCAAGCTCATTGAGACGGTAGGAGCCCAGATCCTGAGTCCCAGAGCGG--GGGAGGTCACCTGATTCTTGAGATCCCAAG-GGGTGGAGGCAGAGTGGCCAGACCCCAGAG-GTCCCCAAGAGAAGCAAGGTTCCTGCACCTAAGGGAAGGGAAGAGGCAGCAGACTCAGAGCTCAGAAAGTAGGGTCATGAGGCTCAGGGCTGAGTGTCTGCTGGCCCTTAGTCAGCTCCTTTCCCACCTTCGAGAG-CCCCCTGCCAACTG-CACTCTCTACAGCAAATGGAGCGGTTCAAAGTTGTGGAGCGAGAGACCAAAACCAAAGCTTACAGCAAGGAGGGCCTGGGCCTGGCCCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACGGTGAGTTGGGGCAGAGAAGAGGAGGTGAACTCTGGGGATCCTGAGCCCCGGGCATACCTGGGAACCCTGGCTGATGGCCTTCCTCT----TCTTCCTCTCCTAGAATACCATTGACACGCTCAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCAGTGCAGACACGCAAGAAGAAGGGCGACAAGGATGTGAGTGAGGGAGACCTGG-CGCCTTTGGGAAGGGGGTGGGGATGGGGACGGGCTGGCCAGCAGGAGGTGCCAGTCATTT--AGGCTCCTGGGAGTTGAATCCTGGATTCCTAAGGTGGACAGGGGCCAGCAGCTGGGATTAGGGATTTGAGAGACACGATCGGGAGGGCTTAGCAGCTGCCTGG---GTGAGGCAGG-AGGAGACCAGACCGAATTTCAGGGTCCCCTGGGTGTCTAGGTAGGCAGCAGGGCCTTGGTGAAGAGGAGCGGTTTGGGGGGAGGTGAATGCAGGTTGAGCTTGGGCCCCAG---AAGTGTGAGACCTGTAGGAC-ACCCATGGCAG---------------GAAGCTTCATGGCACCCAGAGGG--CCCTGGTCCTGGGGAGAGCACAGT---TAGAGACAAGGCAGAATCTGGAGAAAGCAGAGAACCAGGC-CTGAAGGAAGAGAGGA----GTCTGGGACAAAGCTGGATGCTGGGATCCCAGGTTCTAGA-A-TCCAGGATTGT-GGGGTGTGAGTTCAGGGGGATACTTGTTGAAATCGGGGAAACTATAGATACTTGTTGAAACCAGAAAGACAAGGAGGGGAGAGCCAGGTCCTCAGGGAAGCTGTGGGTGGGAGAGGGTCAGGAAGTGGATGATGTCAGGGTTGGGTGTCAGACTCTGAGGGGTTTGGGAACCATGGGCTTGGAGAGGAGTTGTTGGGTCCTTGGACAGAGCAGGG----ATTTGGAACCGAGGCTAAGTTGTTAAATCGTAGAGAGTCCTTGA-----GGGGAGGGCAGGATCGAGGCTTATGAGTCTGGGCTCCCTTGGGGATAAATGGATAGGGTTG-GGAGGCCTAGTGCTGACAGA-ATCATCATTATTCTAAACAGCAAGCTCCTCACAAATGGC------GGTTATCATCATCACTGCTGGGGCAAGCCGG---GGGTGGG--GCATGCCAGAGGTAGTCACAGCCGGTGG------------------------------------------GTGAGGTGCAGGTGGAGGCCAAACCGTAGGATGGCACAGGGACCTCT-GGGTCGTTTAGAGGTTTCCAAGAA---CTGGAGCCAGAAAGGTCTGGGGAGAGGAAG-----GAGCAGTGGGATCCCAAGATGTCAGAAGTCTGAGA-TTGCTCTCACAGGGGACAGAGGGTGGGTGGACCCCATACTGGCCCACCCCAGAAGGGGCTGGAATGGAGG---CT-TTGGGTCTCCACAGGGGTCAGGGACTGAGGACAGGTTCTGTGGGGGCAGAGAGGGGCC-AAGCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i calJac3.chr22 C 0 M 1562 s mm10.chr7 3650652 2539 + 145441459 AGGCCTAAGCTC-TGTCAGGTGAGGGAAGAGCAAGTTAGTGTCTCTTCCTTCTACT--CTCCTACTACCCCTGATTCCTATCCACATTCAT-GACT-TGAGTTTGCACCAGCCCAGGAATGGATGTTAAGTCTATCCCAATTGTTCCCAGCAGCGGCCATTTTCAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTA----ATCGACTGTCTACTGTTCATGTGGCTACATGCCCTTCCTTCCGGGAA---TTCTCTGGATATTTGCAATCTTGGCAAGATCCTAACAGTCTTA---CTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAAGGGGTGGAGCAGTTTGAAGATATTTGGCAAAAGGTA-AGGACCTAGGAACCTTA-A--ATTTTGTTGTCTGTAGGGCAAAGAATCAAGAAGAGGTTCAGGGCCTTGGGGTCTTGACCAGG----------------------------------------GAAGCATCTCTAAGATCGATTGTGGGGA-------GGGGG--TCCTAGATTTCCCAGCCGAGGAAGAAA--GAG--ACTGGACCTTTACAGCTATGGCGAGTTCTGGG-CAGCCACTTTCACATTGACTGCTGAATT--CTTCATCCCTCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAGGCTGACCTAAAGAAGGAGATTAAGAAGCTACAAGTGAGGGGGCTGGGGA--TGGACTCTTGTGTCCTATGGGAGGAGGG-ATGGAGACAGTGGACTGCTGGGTCCCAGGGAGAAAAGGTCATTGAGGACCCCCCTCCCCCCAGTTTCCAGGT-CTACAA---CCTAATTATCTTGCTTTT-TCTCCCTTCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCAAATGAGATCAAGGACAAAAGGCAGCTTATTGAAAACCGCAAGCTCATTGAGACGGTTAGAAACCAGAGCCTGGGGTTCTTTGGGGTGGGAATATGGTCAGGCTCCTGGGACCCAAAGAAGGTGGAGGTGGAGCAGTCA----CTAGAGAGTCCTCGGGAGGAGTATTGTTTCCACAACTAAGGGAAGGGCAGA--------AATGAGGGCTCAGG------------------CTGTTTCTAGCAT-TGCTGGCTCTTA--TAGCTCCTTTTCCATCTTTGAGCA--CCTCTGCCAACTATTACTCTTCACAGCAAATGGAACGGTTCAAAGTTGTGGAACGAGAGACCAAAACCAAAGCGTATAGCAAGGAGGGTCTGGGTCTGGCTCAGAAGGTGGATCCTGCCCAGAAGGAGAAGGAAGAAGTTGGCCAGTGGCTCACGGTGAGTTGGGACGGAGAAGA--AAGTAAGCACTTGGGCCC---AGACTTAAATATATACCAGGGCCTTGA-GGACAAACCT-CTCTTC-CCTTCTCTTCCCCAGAACACCATTGACACCTTAAATATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCGGTACAGACACGCAAGAAGAAAGGCGACAAGGATGTGAGTGGTGGGGGCACCATCACCCACAGGGTAAGGG------TGGAGGTGGCCT-GTGAACAGAGG--G-----CATCTGGAGGCTCATAGGAGTCTGGTCCTGGAT-----------ACA-----------CCTGGGGCAGAGATTGAAAAGGCAGAACAAGGCAGCTT----AGCTGGCTGAGTTGTGGTATAGGGAGGAAGTGAGAGAGGATATTG---------GGATATTTGGGTAGACAGTGTAGCCATTGT---TAGGGGCAGTTTGGGTGAAGATGGACTTAGGTTCAGCTGGCACCACATA------GTGAGACCTGAAGAAAGGACCAAATTGG---------------GAAGATACACAGCACTCCAAAAATTCCCAGGATCTCAGGAGGG---GGTTGGTATGTCT--------------------CTAAGAACCAGTTGCTGTTGGAAACCTGGAAATGGTTTGGGCCAAAGTCATATGATAGGGTCCCGAATCTTACACC-TTTAGGATTGTAAGGGTGTGAGTTCAAAGGGATGT---------------CGACTCTGTCTCGTTAATGGTGTCA-----CCAGGGAAGGAAGTTCTGA----------------TGGGATGGAAAG--------AAAGAAAGATGTCA-----------------CTGG-----------------------GAGGGAAAAGAGTAGATCCTTGATAAAAGGAGGA----ATTTGGAGCTGGCACTAAGGCATTACGTTGTGAAGGGAATTGGAACCTCGAGAAGAGCAGGAGC------------TCTCTGTGGCTGCCCTGATAAACGG-----------------------------------------------ACAGCCAGTTTCCTTCCCATGGACTCTACCTTTATCACTATCATTACCGTTGC--GCTGAGATAGGATGTCTAT-TTCCGGCAGAGGTCAGAA-TGGTGGG-AGGCC-TGGGTAAGACTT----GCT----------GACAGGTAAG--CCAGGCAGAGGCCAAGTTGTAGGGTAGCGCAGGTA-------------TTACAGGTTTCTAGGGATCTTTAGAGCCAAAAGGGTTTGAGGAGA----------GAGAAATGGATCCTTGAGATGTCAGAAACCTCAGATTTGTCCTCACTGGG-ACAGAGGATGGGCAAACTTCTCACTGGCCCATGTT-AGGAGGGCTGGAGCAGAGGCACCC-TTGGGGTGCCCTAGTGATGGGGGACTGAGGACAGGTTCTGTGGGGGCAG-GA-GGGCT-GGCCAGGTGCTCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i mm10.chr7 I 117 C 0 s canFam3.chr1 19611768 2368 - 122678785 TGGCCTCATCTCTCATCAGAG------------AGTGAACGCATCTTCGCTTTACCA-TCCCATGTATTC--CTGTTC---CCAGCCCCGTCATGTTTGTGTTTGGAACAGACAGGGAATAAACAT--GTCCCCCTTCCTTGTCTCTCAGCAGCGTCCGTCTCTAAGAGAGTATGAAGAGAGTGCGTCTGTAGGGCAGGGAAGATGGCGGACAAGCGCAAACTCCAAGGTACTGGTCTCCCTGCCCACTGCCTGTGTGGCCTCGTGCCCACTATCCTCAGAACTCCCCACTGGGTGCCTGCTGCCTGGGCAAGGTGCTAATAGCCTC--TCCTCCCTGGCCAGGTGAGATTGATCGCTGCCTCAAGAAGGTGTCCGAGGGCGTGGAACAGTTTGAGGATATTTGGCAGAAGGTACAGAGCCTGGGGCCTTAACA--GTCTGGGTCTTAGAGGAGAAGAGCATGGGAA-AAGGCTCAGGGTCTCTGGGTGTAGGCCAGG--GAGAGGGGCTGTGGG--TCTGGTGCTGAGGAC--GGAAGGAGCAGCTCTGAGACAGATGGGGG--------TGGGGGC--ATCCATACTCCTCAGA---GGCTGGAGCTTCACCACTAGA--------------ATGGGCACTAGGATGGCAAGCCCCACACTGACACCTGGGCTCCCTTCATCCCGCAGCTCCACAATGCAGCCAACGCGAACCAGAAAGAAAAGTATGAAGCTGATCTAAAGAAGGAGATTAAGAAGCTTCAAGTGAGGGGCCTAGGGGCCCGGCTTCCTGCATCCTGAGGGCAGAGGGAACAGGGAG-----------------------GAGGGGGCTGGCAG------------CCTTGGTGCCCAGGTCCTGAGGCAATGTGAC--TCTTGCTTTTCCCCATCTGCAGCGGCTGAGGGACCAGATCAAGACATGGGTAGCATCCAACGAGATCAAGGACAAGAGGCAGCTCATAGACAACCGCAAACTCATTGAGACGGTAGGAGCTCAGAGCCTG-GTACCTGAGAGGTGGG-AGGTGGCCGGACTCCCTGGG-CCCAAG----------------------------AAG---TCTCTGGAAGAGGATGGTTTCTCCAGCAAGGTTAAGGGGAGAGGTGATGGGCTGGGA------------------------------------------------------------------------------TCTCCTGCCAACTG-CGCTCTCCACAGCAAATGGAACGGTTCAAAGTTGTGGAGCGAGAGACCAAGACTAAAGCCTACAGCAAGGAGGGCCTGGGCCTGGCGCAGAAGGTGGACCCTGCCCAGAAGGAGAAGGAGGAGGTCGGCCAGTGGCTCACAGTGAGTCAGGAAAGAGAGGAGGAGGTGACCTTTGGGG-CCCTAACCTCCAGGCATCCACGGAGACCT--GCTGACCAGCTGCCTTTCCACTCCCTCTCCCCCAGAACACCATTGACACCCTGAACATGCAGGTGGACCAGTTTGAGAGTGAAGTGGAGTCACTGTCTGTGCAGACGCGCAAGAAGAAAGGTGACAAGGATGTGAGTAGGGGGGACACTG-CACCCAGGGGA------------CAGAGATGAGCTGGCGAGTGGGAG--G-----CATGT--GGCCCGTTGGG------------------------------GG----------------------------------------------TAGCACCTGTCT-----GTGAGCCAG------------------TGTCAGGGCTCCA-----GCCTTGGTCAGCAGTGGCACCATGGAAAGGGGGAGTGGTTTGGGGGAACATGC---TGGGTTCTGCTGGGGTTGCAGACTAG--GTGAGAGCAGATAGCC-ATACAGGGTGGAGAAGTCTGAGAGCTGAAGCCTCCTGGCTCCGAGAAGG--CTCAGGTCCTGAGG------CAGTAAGGAGAGGC-AAGCCTCATTTGG-----GCTGAGAA--GAGC-C-------------------ATCTAGGGCAGAGCCAGCT-CTAGGTTCCCAGATTCCAGA-ACTCCAGGGCTGA-AGGGTGTGGATTCAGGGGGATGC---------------AAACGACATGTACTTGATGG---------CAGAGGCAGCGGAGAGCTGGGTCCAGGGGCAGG--GGGCATGGGAGAGG----------------TGCCCAATCTGGGTGTCAGACTCCGAGGAGTTTGGGAAGCTGGAGCCA----------CAACAGGTCCTTGTGGAAAGGATGGGGATATTTAGAACTGAAG-----------------GAGGGGCAGGTGG-----CTGGAGAGCCCGAGCCAAGCTACTGAATCTGGACCCCT----------AGGGGTGGGGATT----------GTGAGGACAAAGATGACGGTGGTCATAAACAGCAAGCTTGCTGCAAACAGG------CATCATCAT--TTGCCGTTAGAGCAAGATGG---GG-------------------------CGG-GGTGGGGTAGGCTGCAGTTGTGAGATCTGGGCT----------GTC--GGGAGCTGCAGG-GAGGGCCACAGTGTAGGA-GGCATGGGGCTTTCT-GGTCTGTTGGGAGGTTTCCAGGGATGTCTGG------------GTGG---------------GAGCTGAGGGTCCTTGAGGGGTC--------------------------------GGGGCGGGCAGACTCCACACTGCCCGTGCCA-GGAGGGGCTGGAGTGGAGC---CTCCTGCATCTCTGCAGGGGTCGGGGACTGAGGACGGGTTCTGCGGGGGCAG-GAGGGGCCTGGGCAGGTGCCCTGCAGCCCCTGAGCCTGGCCCTGGGCTC i canFam3.chr1 C 0 C 0 a score=789135.000000 s hg38.chr19_GL949753v2_alt 120438 193 + 796479 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA s panTro4.chr19 59054403 193 + 63644993 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGACGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930651 193 + 60714840 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTATCACGTGCGCATGTTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCCATCCGCAAGATCAAGGACGACGGTGAGTACTATGTTGACTCATCCCAGGACCCTGACTTCGAGGAGAACGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102696329 193 - 106955855 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTCGTTGATGCTATCCGCAAGATCAAGGACGACGTCGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984383 193 + 64156825 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009098 193 + 59248254 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115365 193 + 51301725 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822572 193 + 50890351 GCCAGCAGAAGCAGGACCGGATCGAGGGCTTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTAGAGACCATCCTGCGCATGCTGGACAATGACTCCATCCTTGTTGATGCCATCCGCAAGATCAAGGACGACGTTGAGTACTATGTCGACTCATCCCAGGACCCCGACTTCGAGGAGAACGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3653191 193 + 145441459 GCCAGCAGAAGCAGGACCGGATTGAGGGCTTGAAGCGGCATATCGAGAAGCACCGCTACCATGTTCGTATGCTGGAGACCATCCTGCGAATGCTGGACAATGACTCCATCCTGGTTGATGCCATCCGCAAGATCAAGGATGATGTGGAGTACTACGTTGACTCATCCCAGGACCCCGACTTTGAAGAGAACGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19614136 193 - 122678785 GCCAGCAGAAGCAGGACCGGATTGAGGGCCTGAAGCGGCACATCGAGAAGCACCGCTACCACGTGCGCATGCTGGAGACCATCCTGCGCATGCTGGACAACGACTCTATCCTTGTTGATGCCATTCGCAAGATCAAGGATGACGTTGAGTACTATGTCGACTCGTCCCAGGACCCTGACTTCGAGGAGAACGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45398583 1562 + 49145316 M a score=3643538.000000 s hg38.chr19_GL949753v2_alt 120631 1023 + 796479 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAATGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCTCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcaaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAAGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCGCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGGCATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCACGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag s panTro4.chr19 59054596 1023 + 63644993 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCGGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCAACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGACACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTATGGGAGCGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACATGCTAAGGTCCTATATCTGGGTCCCTAAAGGACATAAAGAGCAATAGGGTGCATCCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAAGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAAGACTGGAGAGCCTGAATTGAGATGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGCTCTGGGGCCTCAATGGCAGTCAATTGGGCCCAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGACCGGGTGGGCATGCCATTCACTCCTCTGTTGCTTCCCAAAGGCATCTTGAGGCCTGAGCGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGCTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55930844 1021 + 60714840 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGACCCACGGGGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCCAGGGGAGAGTAATTGAGGAA--ACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACATCTGGGTCCCTAAAGGACACAAAGAGTAATAGGGTGCATTCCGCGCCAGTTTAGGTCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAGAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--ATTTGACCAGTTCTGGGGCCACAATGACAGTCAATTGGGCCCAGTT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTA-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGATCGCTGGCCACTGTGCTGGGCTGGTGGACTTTTTTGGGTCAGAAATCAGTGCTGCCCTGAGggcaggtgggcag i ponAbe2.chr19 C 0 I 502 s nomLeu3.chr10 102696522 1023 - 106955855 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC--TGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCGCCGAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacgcccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGTGCACTAGTACCTTGTGTTTCCAGCAGGGCAGGACTCGAGGAGACAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGGTCCTACACCTGGGTCCCTAAAGGACATAAAGAGTAATAGGGTGCATCCCGTGCCAGTTGAGGCCCTGGAT-CTGGGAGGTGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTGGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGCTTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAACACAAGAACATTGGAGAGCCTGAGTTTGGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAATGGCAGTCAATGGGGCCTAGGT-----------------------CCCCGGGACATTCAGAGATTGGCGGTTCTCCATCAGAGCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGGTGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATATTGAGGCCTGAGTGCCGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59984576 1010 + 64156825 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGGTGGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55009291 1010 + 59248254 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGTCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTATATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCT--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47115558 1010 + 51301725 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTccccccccAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGGCACGAGTACCTTGTGTTTCCAGCAGGGCTGGACTCGGGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTAGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAAATCCTACATCTGGGTCCCTAACGAACATAAAGAGTAATAGAGTGTATCCTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTGGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGtcagctgggcccaggg------------------------cccgGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGAGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGCATGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAGGGCAGATGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46822765 1009 + 50890351 GTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA---TCGTGGCACAGGA-AGTGAGGGCCCAGAGTGGGC----TGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAAccagtccagcagcacacccacctcgaccacctccagctctcccatcccgcccagcccagccAACTGTACCACGGTGAGGCCCCACGGGGCACGA-TACCTTGTGTTTCCAGCAGGGCTGGACTCGAGGAGGCAAATCTGGGTCACTCCAAAGTGGCTAGGGGAGAGTAATTGAGGAAACACAGATCTTGGTATCCAGGGTCTAGGCTCTT-GGAGCACACCCTAAGATCCTACATCTGGGTCCCTAAAGAACATAAAGAGTAATAGGGTGTATCTTGGGCCAGTTTAGGTCCTGGAT-CTGGGAGATGGGAGGGGCCGGTGCCTGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTTGGATTCCCTGTTGAGAGCAGGTTCCCAGATCCTTAAGAGGCTGGTGGGTCAGTGCTGGCTCCCAGAAAACAAGAACATTGGAGAGCCTGAATTTAGGTGGTTTCTCCAGGCAGATTAAGGACAGCC--GTTTGACCAGCTCTGGGGCTGCAGTGGCAGTCAGTTGGGCCCAGGG------------------------CCCGGGACATTCAGAGATTGGCGGTTCTCTGTCAGACCCCCAGCGGTCACACAG-GTTTCTG-TTCTGCCTCCCCTACCTCAGGAAAACTCTGAAGATGATAAGAAGAGGGGACGTTCCACAGACAGTGAAGTCAGCCAGGTGGGTGTGAGTCTGGAATGGATGGGTGTGTTGGGCAATA----------TCCCAAAGGCACATTGAGACCTGAGTGCTGGCCACTGTGCTGGGCTGGTGGACACAGGTGGGTCAGAAATCAGTGCTGCCCTGAgggcaggtgggcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45400145 1019 + 49145316 GTTTCTCTATGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGTGGTGA---TGGTGGCACAGGA-AGTGAGGGCCCAGAGCAGGC--TGTGTGAGCCAGCTAAGCATGCCCTCCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCTCCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCAGAGCGCACTAGTACCTCGTGTTTCTAGCAGGGCAGGACTTGAGGAG--AAATCTGGGTTTCTCCAAAGTGACCAGGGGAGAGTAGTTGAGGAAACACAGATCAAGGTAGCCAGGGTCTAGGCTCTT-GGAGCACACGCCAGGGTCCTACATCTGGGTCCCTCAAGGACACAAAGAATAATAGGGTCCATCCTGGGCCAGTTTAAGCCCTGGAT-GTGGGAGGCGGCAGGGGCCAGTGCCGGGGCTGCCTGAGGAGGCTGGGTAGCTGG-----CCACCTTGGGCAGGGATCCAAGGGTGGGATTCCCTGTGGACAGCAGGTTCCCAGATCCTTAGGAGGCTGGTGGCTCAGTGCTGGCTCCCAGAAAAC---AACATTGGAGAGCCTGAATT-GGGTGGTTTCTCCAGGCAGATTAAGGACAGCCATGTTTGCCCAGCTCTTGGGCTGCAGTGGCAGTCACCTGGGCCGAGGT-----------------------CCCCGGGACATTGAGAGATGAGTATTTCTCTGTCAGACCCCCAGATGTCATGCAG-GTTTCTA-TTCCACCTTCCCTCCCTCAGGAAAACTCTGAAGATGACAAGAAGAGGGGGCGTTCCACAGATAGTGAAGTCAGCCAGGTGGGTGTGAGCCTGGAATGGACGGGCATGCCATTCACTTATTTATTGGTTCCCAAAGGCATACTGAGGCCCGAGTGCTGGCCCCTGGGCTGGGCTCGTGGACACAGGTGGGCCAGAAAGCAGTGCTGCCCCAAGGGCAGGTGGGCAG i calJac3.chr22 M 1562 C 0 s mm10.chr7 3653384 951 + 145441459 ATTCCTCTATGACGACCTGGACCTCGAGGACATTCGTGAGGCCCTGG-GCTGACCTTCATGGCACAGAG-GGTGAGGGC----AGGAGGC-ATGGCTGTACCAGCTAAGCATGCTGCTCCCCTACCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGACGAGATCTTCAACCAGTCTAGCAGTACACCCACCTCAACAACCTCCAGCTCTCCCATCCCACCCAGCCCAGCAAACTGCACTACGGTAAGTGTCCAAGGT--------------TATTAATAAGAGGGTGGTCATGGAGGAGTCAAA---AGCCTAGTCT----TGCCTTAGAGAGGGCAGCTCAGGAAGTG-AGCTCTAGGCTT------TTTGTGCTCTGAGGAACGGATATAAAAA------ACCTGGGTTTC---------CACTCAGTTTTAGGGTGCACA-----------TGGGTCTTTGGTGGTGGTAGTCAGGAGGAGTTGGGGTGTGGAAAG-CTGAGGA-GCTGAGCAGCTGGGTGTCTCCCTTCTGACAGGGATCC-GGGGCCAAAGTCTATAAGGAAAGAAG--TCCTGGGTATGTCTCAGGATGG-GAGTGAGTGCTGACTCTCAGATT-----------------------TTTAGGTG--TTAACCAA--AACTTCAGGCTGAGT--ATTGGAGCAGCTCTGGAGC-ACAGGGCTACTCAGATGGGTCTATGAGAGACTGAGAGTAGTAAGGGCCCTCCTGTGTCCTTAAAGGATTGCC--CTCTGTTTTGGGACCCTGGAGGTCACAGAGTTTTTTTA-CTTCACTTCCCCTGCCTCAGGAAAACTCTGAAGATGATAAGAAGAGAGGCCGATCTACAGATAGTGAAGTCAGCCAGGTGGGTCCAAGTCTAAATCTGATGGTT-TGTAACTTGTTTATTGCGTGGTCTCCAAAGTTAC--TGAAGCTGGAGGGTTGGCCACGATGCTGGGCTCTTGGG-ACAGGTGTGCCAGAAA-CAGTGCTACTCTGAGGGTAGG------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19614329 738 - 122678785 GTTCCTCTATGACGATCTGGACCTCGAGGACATTCGTGAGGCCC-GGGGTTGGCC-TACGGGCATGGGGCAGTGAGGGC-CAGGTGGGACGGTGCCCGAGCCTGTTCAGCATGCCCCTCCCTGCTCCCAACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGTCATATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACACCCACCTCGACCACCTCCAGCTCTCCCATCCCACCCAGCCCGGCCAACTGCACCACGGT-------------------------------------------------GAGGAGGCA--------------------GCCCAGGGGAGGGGAACCAAGGAAGTG-GGGTCTTGGTGTCACGGG---------TT-GGAGC-------------------------------------------------------------------------------AT--------GCGGCAGAGGCCAGGCAGTGGG---------------GGGTGGCTCA-------------GGCAGGGATCC-AGGACTGGATTCCCTGAGGAGAGCAGGCTGCCAGGCCTGTGAGACGCTGGCAGG-GGGTGCTGGCTCCCAGGAGACAAGGACCCTGGG-------------------TCCCCCGATGAGGTTAAGGGCATAG--GTC---------------CCGCAGCAGC------------------------------------------CCTGGGAGCTTCAGAGATTGGAG--TCTCTGTTGGGGCCCTAGGGGTCACACAG-GTTTCCGACTGCTCCTCTCTCACTTCAGGAAAACTCTGAAGATGACAAGAAGAGAGGACGCTCAACAGATAGCGAAGTCAGCCAGGTAGGTGTGA------------CGGGCACATCAGTCTGCCATTGG-----CTCCCAGGGCTCACAAAGGCCTGAGTGCACCCCA---------------------AGGAAGGCCAGTA------GCCTTACTTAGGGCAGGTGTGGAG i canFam3.chr1 C 0 C 0 a score=613169.000000 s hg38.chr19_GL949753v2_alt 121654 227 + 796479 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAGCACACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGTTT-----------------------------------------------------------------------------------------------GGAAGTGAGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCA-GGGCCCAAC------ s panTro4.chr19 59055619 226 + 63644993 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTTGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932367 226 + 60714840 -GGCAGGTGGGCAGGGGACTGGTGCTGTGGTCAAGGGGGTAG--CGCAGGTCACTCTCGGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTCACAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGGGGAGAGATGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i ponAbe2.chr19 I 502 C 0 s nomLeu3.chr10 102697545 226 - 106955855 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTAG--CACAGGTCACCCTCGGCCTGGCC-----AGGCAGTCAGGAGAGGCTGCTGTGGAG-------TGCCCTGGGCCTCAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGTGGCAGCCAGTAACATGGGCAAGTTGTGACAGAAAGCTT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGGTGAGTCTGGCCAGGTCTGCAGGGCCAGGGGCCCAAC------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985586 224 + 64156825 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCTGGTGTGCAGGGCCAGGGCTCCAAC------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010301 224 + 59248254 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGCGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGCTCCAAC------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116568 224 + 51301725 -GGCAAGTGGACAGGTGACTGGTGCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTGCTGTGGAG-------TGCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCTTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------GGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823774 224 + 50890351 -ggcaagtggacaggtgactggtgCTGTGGTCAAGGGGGTGG--CACAGGTCACCCCCAGCCTGGCC-----AGGCAGTCAGGAGATGCTACTGTGGAG-------TCCCCTGGGCTTGAGAGTCAGGTGA--GTTTGCCTGGCAGGGAGAGGCGGCAGCCAGTAACAAGGGGAAGTTGTGACAGAAAGCCT-----------------------------------------------------------------------------------------------AGAAGTGTGGAGAGATGG--CTGGCCAGGTGTGCAGGGCCAGGGGTCCAAC------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401164 309 + 49145316 --GCAAGTGGACAGGTGACTGGTGCTGT-------GGAGTAG--CACAGGGCACCTCCAGCCCGGCC-----AGGCAGTCAGGAGATGCTGCTGCAGAG-------GGCCCTGGTTTTCAGAGTCAGGT----GTTTGCCTGGCAGGGAGAGGCAGAAG-CAGTAACACAGGCAGGTTG-GACAGAAAGCTCAGGAGTGTGGAGAGATGAGGGAGTGCGGGGAGACGCAGAGGAGCGCGGGGAGACGGGGGGGCGGCGGGGGGAGACGAGGTAGTGTGGAGAGAGGAGGAAGTGTGGAGAGATGAGGTGGGTCAGGTCTGTGGGGCCAGGGGCCCAAC------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3654335 120 + 145441459 ------GT-----GATGACTGGTGGTGTGGTT---GAGGTGG-----------CCTGTTGTCTGGCTTATAGAGGAAGAC--TAGGTGGTACTGTGG-------------------------------------------------------------GCAGGTCACACAGGGAA-CTGTGGCAAGAAGTTA-----------------------------------------------------------------------------------------------GGAAGTAT-GAGAGGTGG--------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19615067 215 - 122678785 GGCCAGGCAAGCAGGTGGCTGGTGCTGTGGTTGAGTGTGTGG--CATGGAGTA---GTGGCCTGGCCT----GGGTGGTCAGGAGACATTGCTCCAGAGAGACCCCTGCCCGTGACGTGGGGGGAAGACTATGGTTTACCAGGTGGGGAGAAGGGGGCG---------------------GGCAGACAGGTG-----------------------------------------------------------------------------------------------GGTGGTGTCCAAAGATGA--CCCACCTGGCT--CAGGCCGAGGGTCCCGCCCCCCAC i canFam3.chr1 C 0 I 99 a score=285356.000000 s hg38.chr19_GL949753v2_alt 121881 91 + 796479 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCCAATAAGCCTAGGAAGCGAT s panTro4.chr19 59055845 91 + 63644993 TGTGAGCGCAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932593 91 + 60714840 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697771 91 - 106955855 TCTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGTCAAATAAGCCTAGGAAGTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985810 91 + 64156825 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010525 91 + 59248254 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGAGCCAAACAAGCCTAGGAAGTGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116792 91 + 51301725 TGTGAGCACAGGGACTGGGACTGTCAGGCTGAGCGGCTCAGGCTTTGTGGACCTGAGTGGCCTCCAGATCCAAACAAGCCTAGGAAGTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46823998 90 + 50890351 TGTGAGCACAGGGACTGGGACTGTGAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCGGCCTCCAGAGCCAAACAAG-CTAGGAAGTGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401473 91 + 49145316 TATGAGCACAGGGACTGGAATTATCAGGCTGAGGGGCTCAGGCTTTGTGGACCTGAGCAGCTTCTACTGCCAAACAAGCTTGGGAAGTGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3654455 57 + 145441459 -------------------GCTGTTGGACTGAG-------GACTCTTTGGTC--------TCTTGAGGACCCAAATAGCCTGAGAAGTGAT i mm10.chr7 C 0 C 0 e canFam3.chr1 19615282 99 - 122678785 I a score=1903203.000000 s hg38.chr19_GL949753v2_alt 121972 636 + 796479 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCAGGTAGTAGTGAGGGCGGGCAACAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCGGAG-TGCTGTCCACAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC s panTro4.chr19 59055936 636 + 63644993 GGG-----------GCCTTTGCTGTGCTGATAATACACACTGCAAATTTCTGAGAGGAGACGGTGGCGGGCAGTGCTTCT----------------------------TCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAACAATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCGCGGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGTAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATGCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGTGGTTAGGCTCAGCAGCCCGAG-TGCTGTCCGCAGATTGCCTGCGGTAGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGCTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55932684 633 + 60714840 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGG-GACGGTGGCGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCTCCCGGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAGCATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGATGGTTCCAAG-GGGACACCCTGAGTGGGCATTGAGGAGGCTGTTGTGGAGACTGAGGGAACTCGCAGGTAGTAGTGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAG--GACACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAGTGGGTAGTCAGTCCTGTTGGGCTCTTAGTAAGCGCAAGGTGCCTGTGGGGTGGCTGGAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCGTGA------GCACATTTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTCCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102697862 632 - 106955855 GGG-----------GCCTTTGCTGTGCTGATAACACACACTGCAAGTTTCTGAGAGGAGACGGTCGCGGGCAGTGTTTCT----------------------------CCAACTCCTTTAACATCTCCCAGGACAGGAGCACGCTTTCGGAAACGCTGCTACAGAAG-ATGTTAGGCAGGAGCAG---CATGGGCCTGAGGCCCCTCTGTAGGCTAATGGGATGGACAGTTCCAAG-GGGACATCCTGAGTGGGCATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCCACAGGTAGTAGAGAGGGCGGGCAGCAGGGCCAGGAGGTGATGA---GAGACACTGAGGCAGGTACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCCCCC--ACTGCCAAGCAGCGATCCCCAGGAGAGAAATGGGTAGTCAGTCCTGTTGGGCACTTGGTAAGCGCAAGGTGCCTGTGGGGTGGCTGCAAAGAAGCCCAGGAGGCGGTTAGGCTCGGCAGCCCGAG-TGCTGTCGGCAGGCTGCCTGCGGTGGGGATACCATGA------GCACATGTACCCTCCCACCGCTTTCTGGAGTGCTG--GTAACTTGCAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACA-TTCAGAATTA-CTATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59985901 633 + 64156825 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGTCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55010616 633 + 59248254 GGG-----------G-CTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGATGGTTTCGAG-GGGACACCCTGAGTGGGCACTTAGGGGGCTGGCGTGGAGACTAAGACGACCCGCGGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGCGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGTGGCTGGAAAGAGGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGACG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47116883 634 + 51301725 GGG-----------GCCTTTGCTGTGCTGATAACACACACTTCAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCTTCT----------------------------CCAACTCCTGTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAACGCTGCCACAGAAGAATGTTAGGCAGGAGCAG---CGTGGGCCTGAGGCCCCTCTGTGGGCTAACGGGATGGACGGTTTCGAG-GGGACACCCTGAGTGGGCACTgggggggCTGGCGTGGAGACTAAGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAAGAGGTGATGAGGAGAGACACTGAGGCAGATACTccaggggccaggctgggctctgccACCTTCCCAGCCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGCGCAGGGAGCCTGTGGGGCGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCGGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGCCCTGTGAGTAGTTTCTGTGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824088 634 + 50890351 GGG-----------GCCTTGGCTGTGCTGATAACACACACTTGAAGTTTCTGAGAGGAGACGGTGGTGGGCAGTGCGTCT----------------------------CCAACTCCTTTAACATCGCCCAGGACAGGAGCCTGCTTTCGGAAATGCTGCTACAGAAGAGTGTTAGGCAGGAGCAA---CGTGGGCCTGAGGCCCCTCTGTGGGCTAATGGGATGGACGGTTTCAAG-GGGACACCCTGAGTGGGCACTGAGGGGGCTGGCGTGGAGACCAGGACGACCCGCAGGTAGTAGGGAGGGCGGGCAGCAGGGCCAGGAGGTGATGAGGAGAGACACTGAGGCAGATACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGCTCCC--ACTGCCAAGCAGCGAT-CCCAGGAGAGAAGTGGTTAGTCAGTCCTGTTGGGCGCTTGGTAAGTGCAGGGAGCCTGTGGGGTGGCTGGAAAGAAGTGCAGGAGGTGGTTAGGCTCAGCAGCCTGAG-TGCTGTCGGCAG-CTGCCTGCAGTGGGGATACCATGA------GCACATTTACCCTCCCACCACTTTCTGGAGTGCTG--GTAACTTACAGTCCTGTGAGTAGTTTCTATGACCCTTCAGGTGATG-TTCAGAATTA-CTATCCAATTTCTAGCTG-------------------------------TTTTTCCTTCTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45401564 635 + 49145316 GGG-----------GCCTTGGTGGTGCGAGTAACACACACTGCGTGTTTATGAGAGAAGACGGTGGTGTGCAGTGCTTCT----------------------------CTACCTCCCCTAACATCTCCCAGGACAGCAGCA-GCTTCAGAAAACGCTGCTACAGAAGAATGTTAGGCAGGAGCAG---CCGGGGCCTGAGGCCCCTCTGTGGGCTGATGGGATGCATGGTTCCAAG-GGGACACCCTGAGTGGACATTGAGGAGGCTGGTGTGGAGACTAAGGGGACCTGCAGGTAGTGGGGAAGGTAGGCAGCAGGGCCAGGTGGTGATGAAAAGAGACGCCAAGGTAGGGACTCCAGGGGCCAGGCTGGGCTCTGCCACCTTCCCAGGTCCCC--ACCGCCAAGCAGCGAT-CCTAGGAGAGAAGTGGGTAGTCAGTCCTGCTGGGCGCCTGGTAAGCGCAGGGTACCCGTGGGGTGGGTGGAAAGAAGC-CAGGAGGCGGTTAGGTTCAGCAGCCTGAGCTGCTGTTGGCAGCATGCCTGTGGCGGAGATGCCAGGA------GCACGTTTACCCTCCCACCACTTTCGGGAGCGCTG--GTAATTTACGACCCTGTGAGTAGTTTCTCTGACCCTTCCGGTGGCATTTCAGAAGTG-CCATCCAATTTCCAGCTG-------------------------------TTTTTCCTTCTAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3654512 633 + 145441459 CAGAAAGTCAGACTGCCTGTGCTGCACTGACTGCAGGAAGCAC---TTCCTGAGAGAGGAAGGCAGTATGCGGCACTTCTGAATTCCTTTAGATCCTAATGAATAAACTCAGCTCTGTCAATTTCTCCTACAATAAGAACATATCTTAGGAGAC----------AAGAATGTT--GTTGAAGAAG---C-----CCAGAATTCCTT---TAGGCTAATAGAAAGGACAGTCTCCAGTGGGAGGACCTAAGTGCACACTAATGAAGCTAATTTGGGGACCAGG----------------------GTTTAGGAGCA--GCCAG--AGTAATGGAGTGAGGAGGTGGGGCAAGGAATCATGGGGGTGGGCTTAGTTCTGCCACCTTATCAGGCCCCTTGACTGTCAAGCAGAAGT-CCCAGGAAAAATGTGAATGGCCAGTTTTCTTTGTGATTT----------------TTGTGTGGTGGTC----AGAAGGCTAGGAGGCAGTTTGGCATGGCAGCCTGGT-TGTTGG----AGCGTAGTTTAAGTAGGGATGCCCTGGAGCACTGCATTTTTACAGTTTCATGATTAGCTGACATTCGGAAGGAATTGATTGTCCTAG-------TTCCCTTACGCTTAA----ACA-TTTAGGCTGATCCAACTAATTGCAAATTGAGGTTGGGATTTTTGTTTTTGTTTGTGTTGtttgtttcttttac i mm10.chr7 C 0 I 53 s canFam3.chr1 19615381 383 - 122678785 TGG-----------GTCTTGGCTGTGCTAGTGATGGACATCATGGACTTCCGAGAGGGGA-----------GGCACTTCT-----------------------------CAGGCCGTCTGTGTTCCCCCA------------------GTGAACCCTGT-------GGATCTGGGACGGGAGCTGGTCCTCGAACCAGGGTCC-----------------------TAGTTAGGGA-GGAGCCTGGTGGGAGGGCACCGGTAGGGCTGCTGTAGGCCCTGGG-----------------GGGGGGG---------GGGCCAGGAACCAGTTGG--------------------------------------------------TCTCATAATCCC---TTGACATGTGGCATG---------------------------------------------------------TGTGAGGTG--------------TGGGGAGCAGTTAGCTGC------------CACTGT------------------------GCCCTGG------GCGTG-------TCACTCTGCTCTCTAG-GTAGTG--GTCATCAGCAGCCCTTCAAGTAGCTTTTGTGACCCTTGAAGTGACA-TTCAGGACTG-CTGTCCAATTT--AGATT-------------------------------TTTTTTCTTC--- i canFam3.chr1 I 99 C 0 a score=69762.000000 s hg38.chr19_GL949753v2_alt 122608 22 + 796479 TCTTGGACATTAGGCGGCTCCA s panTro4.chr19 59056572 22 + 63644993 TCTTGGACATTAGGCGGCTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933317 22 + 60714840 TCTTGGACATTAGGCGGCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698494 22 - 106955855 TCTTGGACATTAGGCAGCTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986534 22 + 64156825 TCTTGGACATTAAGCTGCTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011249 22 + 59248254 TCTTGGACATTAAGCTGCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117517 22 + 51301725 TCTTGGACATTAAGCTGCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824722 22 + 50890351 TCTTGGACATTAAGCTGCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402199 22 + 49145316 TCTTAGACGTTAGGCTGCTCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19615764 20 - 122678785 TCTTGGAC--TCAGCTGGTTGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3655145 53 + 145441459 I a score=7231605.000000 s hg38.chr19_GL949753v2_alt 122630 2004 + 796479 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACA--AAGATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCCGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggcggcggcagcggaggtggaggGAGCAGCAGCAGTAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGAGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCCTCGGGTGTT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAATTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAGG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCAGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T s panTro4.chr19 59056594 2093 + 63644993 GCTAATCTCATATT----GAGAA--------------CACTTAAGTGTT--------------------TCCCACTAGTCCTCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCAT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGCGAGTGTTTTAAGCATGAAGGTG---ATTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------CCCCAAGAGGGCAGGAGCAGGTGCG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGGCTGAG------GTGGGGGTGATGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggaggaggcggcagcggaggcggagggagcagcagcagtagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCGTGGGCGGGGCTGGGCAGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTTGAAACAGAGAGGCGCAGGCGCCTCACCCCCGCATCGGTGGGTTCTGAA-CCCCCCGCCCTTGCTGCTGGGAATGGC---CAAGCGCTA------TCCTCCATCTCCATCGGGTATT-ACACCCCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTAAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCTGAGGC-CAACTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATTGTCCCGAAGTCCTTATTCCTCTGCAGCCACTCCTTCAAATCTTAGCTCAGACCATTCCCCTGGGTCTGCCTGTTTCCCGAAGAATGCCCTAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCT------GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAATGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGACAGTCCTCACC-CCCACCCCCACAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATGGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTGCCCTCACCTGCCCCTCTCAGATCCCATCTGATATGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--CCCCCGAGCCTCTGTGTCCTGACTCTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCCCTGCCCCCACCCTCTTTCTGGATCTCTTTCTCTGGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55933339 1995 + 60714840 GCTAATCTCAGATT----GAGGA--------------CACTTAGGTGTG--------------------TCCCATTAGTCCCCTGGCTTCCAACAGATG-GGTCTTCTCTGGCTGAC-------AACCTAAGTTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGCG---ATTGAAGCCATGAGGGTG----AGGTCACCCAGGT------CCCCAAGAGGGCAGGGGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGATGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTAgcggaggcggtggaggcggcggcggaggcggagggagcggcagcAATAGTAACAGCACAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGTGGGGTGGGGGGCATGGACGGGGCTGGGCCGCAGGCAGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCTGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGGTGGCAGCCTTTCGAAACAGAGAGGCACTGGTGCCTCACCCCTGCATCGATGGGTTCTGAA-CCACCCGCCCTTGCTGCTGGGAATGGC---CGAGCGCTA------CCCTCCACCTCCGTCGGGTGTT-ACACCTCCACTTCTTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACTTGCCTGAGGC-CACTTGACTGCCACCGGAGGGTCACTGTTTCACTTTTCAAAGTGAATT--------GTCCTCATTCCTCTGCAGCCACGCCTCCAAATCTTAGCTCAGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------TAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCTAGCTCCAGCTAGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACC-CCCACCCCCACAGCTCTCCTCTGCTGATGAGAAACCATTCCAAAGATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCCCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGA-CCC---TCCTCTCAACTCC-CTCTTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCAGCAGCCCCAACGGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGCGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTAGGACGT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102698516 1994 - 106955855 GCTAATCTCATATT----GAGGA--------------CACTTAGGTGTT--------------------TCCCTCTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGG-TGAC-------AACCtaagttgtgtgtcagatccctgtgggggtgtccat-ggggcggtgtccagacaggacttggga-agctgg---gcaggctggaaatcagtgtgagtgttttaagcatgaaggtg---attgaagccatgagggtgagtaaggtcacccaggT------CCCCAAGAGGGCAGGAGCAGTTGGG--GGCAGCGAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGG-TGGTGA--GGGAGACCTGCTGGCCCACTGAGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAATGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGCGCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCTCCCTATGCCCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGTCTAGCggaggcggtggaggcggcggcggaggcggaggGAGCGGCAGCAATAGTAACAG--CAGTGCCAGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGTGGGGGGCATGGGCGGGGCTGGGCAGCAGGCGGCAGCCC-TTTCCA-TTTACTCTT--TGTTCCCAGGTTACAGCTCCGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCGGCAGGGTTGGGATGGCAGCCTTTCGAAACAGAGAGGCGCTGGTGCCTCACCCCCACATCGATGGGTTCTGAG-CCCCCCGCCCCTGCTGCTGGGAATGGC---CGAGCGCTA------TCCTCCACCTCCGTTGGGTGTT-ACACCCCCACTTCCTTCCAGCAAGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATACATTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCT-CCCGTTTCTGTTACCTGCCTGAGGC-CACTCGACTGCCACCGGAGGGTCACTGTTTCAC-TTTCAAAGTGAATTGTCCTGAGGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTT-----AGACCATTCCACTGGGTCTGCCTGTTTCCTGAAGAATGCCCTAAGAAAGAT---------CAATGTGCACAAAGGAAAGGCCTGCTTCCCG-----GCCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGGGG------GAGTGGGCCC--TGTGAACACCTGCCCAAG----------GCAAGGGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGATAATCCTCACC-CCCACCCCGACAGCTCTGCTCTGCTGATGGGAAACCATTCCAAAGATGGGGCTCTGCC--TGTTTGCCCAGAGAACCACTTCTTTCTCCCATCTGTCTACCCTCAGCTGCCCCTCTCAGATCCCATCTGATCTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCACCCCACCCTCAGGGA-CCC---TCCTCTCAACCCC-CTCTTCCATGCTGTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCTAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTGCTCAATGGGCCTCCACAGTTCAGCACTGCCCCGGAAATCAAGGTGGGCTCCTCGGACAT--TCCCCGAGCC-----------------------------------------------------------------------------------------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59986556 1989 + 64156825 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-TCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTACCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55011271 1989 + 59248254 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGCC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCTCCGCCCCAGCAGCACCCCCAAGTGCCCTGGGTCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggt------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCACGGAAAC----TACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAATATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAACCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGG-TACTTGATTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCGTTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCCCTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGCGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCGAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTGCTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCCTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47117539 1989 + 51301725 GCTAATCTCATATT----GAGGA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTATCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAGGCTGGAAATCAGTGTGAGTGTTTTAAGCATGAAGGTG---ACTGAAGCCATGAGGGTGAGTAAGGTCACCCAGGT------TCACAGGAGGGCGGGAGCAGCTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGTACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCTGCCCCAGCAGCACCCCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGCCCAGCCTggcggaggc------ggcggcggcggaggtgGAGGGAGCGGCAGCAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGTCC-Ttcccattttattctt--tgttcccAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCATCAGCAGGGTTGGGATGGCGGCCTTTCAGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---TGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACACCCCCACTTCTTTCCAGCATGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACGTGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACTTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGTAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGAAAGGCCTGCTTCCTG-----GTCCCCTCACCCCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGACCTGGT---------------------GGAGCACCCGATAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCCTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGtctcccctctctccagccaggcctctctgcccatcccaccctcagggg-ccc---tcctctcaacccctctctTCCATG----CTCTCCAGGAAAGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46824744 1984 + 50890351 GCTAATCTCATATT----GA-GA--------------CATTTAGGTGTT--------------------TCCCACTAGTCCCCTGGCTTCCAACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGTTGTG-GTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCTGG---GCAggctggaaatcagtgtgagtgttttaagcatgaaggtg---actgaagccatgagggtgagtaaggtcacccaggT------TCCCAGGAGGGCGGGAGCAGTTGGG--GGCAGCAAGGCCAGAGAGGAGGCTGCTGGGACG--AAAATGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCACTGGGTCCTGATCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCCGGCCCCCCGCCTGCTGCCTCTGCCTTGAGCACCACTCCTGGCAACAACGGGGTCCCCGCCCCAGCAGCACCGCCAAGTGCCCTGGGCCCCAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCATCGGCTACCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCAGCGTCCAGCCTggcggaggc------ggcggcggcggaggtggagggagcggcagcAATAGTAACAG--CAGTGCCGGTGGAGGGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAGGCAGCGGGGT---GGGCATGGGCGGGGCTGGGCAGCCGCCGGCAGCCC-TTCCCATTTTATTCTT--TGTTCCCAGGTTACAGCTCAGTTGTGGCAGACAGCCCGGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAGCAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTCGGCCACCAGCAGGGTTGGGATGGCGGCCTTTCGGCACAGAGAGGCGCTGGTGCCTCACCCCTGCATCAGTGGGTTCTGGG-CCCCCCGCCCTTGCTGCTGGGAATGTC---CGAGCACTG------TCCTCCACCTCTGTCGGGTGTTAACA-CCCCACTTCTTTCCAGCACGGAAAC----GACATCAGCCTCCCTGCTTTGCCCTTCAGAACATTCTAAAACATGTTCTCATCTAAGTGGAAGTTTTCTCAAGAGCCCCATACCCTTTCCTCCCCATTTCTGTTACCTGCCCAAGGC-TACCTGACTGCCACTGGAGGGTCACTGTTCCACTTTTCAAAGTGAATTGTCTCGAAGTCCTCATTCCTCTGCAGCCACTCCTCCAAATCTTAGCTCAGACCATTCCACTGTGTCCGCCTGTTTCCCGAAGACTGCCCCAAGAAAGAT---------CAGTGTGCACAAAGGGAAGGCCTGCTTCCCG-----G-CCCCTCA--CCAGCTCCAGCTGGCCTGCCCAAGAGG------GAATGGGCCC--TGTGTCCACCTGCCCAAG----------GCAGCTGGTTTTG-------------ATCAGCCTGTGGCCTGGT---------------------GGAGCACCCAAGAATCCTCACT-CCCACCCCCGCAGCTCTGCTCTACTGATGAGAAACCATTCCAAAGATTGGGTTCTGCCTTTGTTTGCCCAGAG-----CCACTTTCTCCCATCTGTCTACCGTCAGCCGCCCCTCTCAGATCCCATCTGATGTGTGCAGTCTCCCCTCTCTCCAGCCAGGCCTCTCTGCCCATCCCACCTTCAGGGG-CCC---TCCTCTCAACCCCTCTCTTCCATG----CTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCAGGGGGACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCCGGTGCCCTACTCAATGGGCCTCCACAGTTCAGCACCGCCCCGGAAATCAAGGTGGGCTCCTTGGACAT--CCCCCGAGCC-----------------------------------------------------------------------------------------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45402221 1991 + 49145316 GCTAATCACATATT----GAGGA--------------CACTTAGGTGTT--------------------TCTCGGTAGTCCCCTGGCTTCCGACAGATG-GATCTTCTCTGGCTGAC-------AACCTAAGCTGTGTGTCAGATCCCTGTGGGGGTGTCCGT-GGGGCGGTGTCCAGGCAGGACTTGGGA-AGCCAG---GCAGGCTGGAAATT------AGTGTTTTAAGCGTGAAGGTG---ATGCAAGCCATGAGGGTGAGTAAAGTCACCCAGGT------TCCCAGGAGGGCGGCAGCAGCTG-G--GGCAGCAAGGCCAGAGAGGAGGCTGCTAGGACA--AAAGTGGAGCCTGAG------GTGGGGGTGGTGA--GGGAGACCAGCTGGCCCCCTGGGTCCTGACCCTCTGCTCTCTC-------CCACCCGCAGTCTCCAGCCAAAAACGGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCTGTGCCACCCACCTATTCCTCTGGCCCCCCACCCACTGCCTCTGCCTTGAGTGCCACCCCTGGCAACAATGGGgcccctgccccagcagcacccccaagtgccctgggccccaaggccagtccagctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccaccagctcccagtgggcccagcaccacccagccccggccccCCAGCGTCCAGCCTAgtggaggcggtggaggtggcggcggaggcggagggagcagcagcaatagtaacag--cagtgccggtggaggGGCTGGCAAGCAGAATGGCGCCACCAGTGAGTGGGGAATCATCGGGGTGGGGAGCGCGGGCGGGGCTGGGCAGCAGCCGGCAGCCC-TTTCCA-TTGGCTCTT--TGTTCCCAGGTTACAGCTCAGTTGTAGCAGACAGCCCAGCAGAGGTGGCTTTGAGCAGCAGTGGGGGCAACAATGCCAACAGCCAGGCCCTGGGCCCCCCTTCCGGCCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCTTGGCTGTTGACAGGGTTGGGGTGGCAGCCTTTTGGCACAGAGAGGCACTGGTGCCTCACCCCCACCTTGATGGGTTCTGGGCCCCCCCACCCTTGCTCCTGGGAACGTCCAGCAAGTGCTG------TCCTCCACCTCCATCAGGTGTT-GTGCCCCCACT---TTCCAGAAAGGACAC----TACATCAGCCTCTCTGCTTTGCCCTTCATAACGTTCTAAAATACATTCTCATCT-AGTGGAAGTTGTCTCAAGAGCCCCGCACCCTTTCTTCCCCATTTCTGTTACCCGCCCGAGCC-TACTTGACTGCCACAGGA-GGTCAGTGTTCCACTTTTCACATTGAATTGTCCCGAAGTCCTCATTCCTCTGCAGCTACTCCTCCAGATCTTAGCTCAGACGGTTCCACTGGATCT--CCGTTTCCCGAAGAATGCCCCAAGAAAGAGCTTAATTAACAATGTGCACAAAGGAAAGGC---CTTCCTG-----GCCCCCTCGCCCCAACTCCAGCTGGCCTGCCCAAG-GG------GCATGGGCCCTGTGTGTCCACCTGCCCAAG----------GCAGCCTG-------------------------TGTGGCCTGGT---------------------GGAGCCCCCAAGAATCCTCAC--CCCATCCCTGAAGTTCTGCTCTACTGATAAGAAACTGTTCTAAAAATTGGGCTCTGCCTTTGTTTGCCCAGAGAACCACTTCTTTCTCTCATCTGTCTGCCCTCAGCCACCCCTCTCAGATCCCTTCTGATTTGTGCGGGCTCCCCTCTCTCTAGCCAGACCTCTCTGCCCATCCCACCCTCAGGGGACCC---TCCTCTGAGCCCCTCTCCTCCATGCTCTCTCTCCAGGAAGGAACCCAGTGCGGCAGCCCCAACAGGGGCTGGGGGCGTGGCCCCAGGCTCAGGGAACAACTCGGGGGGACCCAGTCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCCAACGCCCAGCTTCAGTGATGCCAAGGCAGCTGGTGCCCTGCTCAATGGGCCTCCGCAGTTCAGCACCACCCCGGAAATCAAGGTGGGCTCCTCAGATAT--CCCCTGAGCC-----------------------------------------------------------------------------------------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3655198 1817 + 145441459 gctaatctcagactcatagagggctgcctgtctctgcctctcaagtgctaggatcaaaggcatgtgtcaccacTTTAGGTCTCAAGTTCAGGGTATTTGAGAGTTTCCCTTGGTCTCTTGTCTTAACCTAAACCCT--GTCAGATTCATGTGGG-----CTATAGGGACAATGTCCGGGGAGGACTTGGGACAGCTGG---GTGGGCTGGAAGTAAATAG----GTCTTAAACCTGAAGGTG---ATTGAA------------------GTCTCCTAGGT------GCCTCAGAGAATGTGGACAGTTAAT--AGC----AGGTCAGAGGCAAGGC----------------AGGAGGACAAG------AAGAGGGTGGTGGATAGGGGACAGGCTGGTCTAGTA---CCTGACCCTTTGTTTTTTCTTTCTTTCTTCCTGCAGTCTCCAGCCAAAAATGGCTCCAAGCCTGTCCACAGCAACCAGCACCCCCAGTCCCCAGCTGTGCCGCCCACCTACCCCTCTGGCCCCCCACCTACCACTTCTGCCTTGAGCTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTGCCCTGGGCCCTAAGGCCAGTCCAGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCCCAGGCTGTGGCCCCACCTAATGCCAGCGGGCCCAGCAATGCCCAGCCACGGCCCCCCAGTGCCCAGCCAAGCGGGGGA------AGTGGTGGTGGCAGCGGAGGGAGCAGCAGCAATAGTAACAG--TGGCACAGGCGGAGGGGCTGGCAAGCAGAACGGTGCCACAAGTAAGTGGAG----ACCAGTTTGGGGAACA-GGGCAAGG-TGGACAGTAGCTGACAGCCTGTTTACA-CTTGTCCTT-CTTTCCCCAGGCTATAGTTCGGTTGTGGCAGACAGCCCTGCAGAGGTGACCCTGAGTAGCAGTGGGGGCAGCAGTGCCAGCAGCCAAGCCCTTGGGCCCACTTCGGGCCCTCACAACCCAGCTCCCAGCACCTCGTGAGT------------------AGTGGGGTGGCAGTGTGTGGGCAC----AAGCTCTTATGC----CACTTGTTTTA--GGGTTCCAAG---TTCTACCCTTCCTG--GGTAGTACC---TACCCAGTGTGTCCTTTCTTCACCTCAG-CAAGTGTTCTTTTCCCTGCTTCTTACCAAGTGGG------------------------------------------------ACATGTTTTACTCTCGG-------TTTCACAC--------TACACTGTCTT-CCCATTTCTGTTCTTTGCTCTGAGG-CAGCTGACTCCCATGAGTGTGGGGGCTTTTCCCTTTTCCAAGTAAAATATC-----------------------CTAGTCCTCCATTTCTT----------------------CAGCTTG-----------------------ACAT---------CAGATT--ACTAATGAAAGATCTGCTGCCTT-----G----------TCAGCCTCG--TTACCAGTCCTACTGG------GATTGCACCA--TGTG--CATCTGTGCAATCATTTACTCCAAAACTGTTTCAGTGACAATTCTAGAACTACCCTGTCCCCTGTCCTTTAACTTCATAAGCTGTTGGGGGGACCCTAAAATCCTGGTTGCACACCTCAGTACCTCTGCTGTACTGAAGAGGAG----TCCAGAGGTTGGATTC-ACTTCTGCATGCTC---------CAGCTGTCTT---GCTTTCAGCCCCCACCC-CCCTTTTTGGATCCCATAT----------------------------------TCTGTGCCTGT-----CTTCAAGGA-TCT---TAATTTGATT----CTCCTCCATTCT--TTACCCAGAAAGGAATCCAGTACGGCAGCCCCATCAGGGGCTGGGAATGTGGCTTCAGGCTCAGGGAATAACTCGGGGGGACCCAGCCTCTTGGTGCCACTGCCTGTAAATCCCCCCAGTTCTCCAACGCCCAGCTTCAGTGAAGCCAAGGCAGCTGGTACCCTGCTTAATGGTCCTCCACAGTTCAGCACCACCCCAGAAATCAAGGTGAGTTTCTCGGGTGTGAGCCCTGAGCC-----------------------------------------------------------------------------------------T i mm10.chr7 I 53 I 917 s canFam3.chr1 19615784 1640 - 122678785 ACTAATTACATACT----GAGGA--------------CATTTAGTTACC--------------------TCCC--------------TGCCCTCAGATG-GGT-GTCTGTGACCGAC-------ACCCT-GGTTGTGTGTCAAACCCCCACCGG-ATGT-TGT-GGGGAGGCGTCCATGTAGGACATGGGG-AGCTGGGGTGGGGGCTGGGATGCA-TGTGAGTGTCTTAGGTGTGAAGGTGGTTATTGAAGCCTTGAGGCTG----AGGTCAGCAGGGGGAGGAAGCTCAGGCAGCCAGGCCCAGTGAGGACGGCAGCCCAGCTTGGAGGAGGGGTGCCGGGGCGGCGGGGGGGAGGGCGGGCAGCATGTGCGGGAGGCTC--AGCAGACCTGCTGGTCAATTGGATCCTGATCCTCT--TCTCTC-------CCACCTGCAGTCTCCAGCCAAAAATGGCTCTAAGCCTGTCCACAGCAACCAGCATCCTCAGTCTCCGGCCGTGCCGCCCAGCTACCCACCTGGCCCCCCACCTGCCACCTCTGCCCTTAGCACCACTCCTGGCAACAATGGGGCCTCCACCCCAGCAGCGCCCACAAGTGCCCTGGgccccaaggccagcccagctcccagccacagttccggcacccctgccccctacgcccaggccgtggccccaccagcccccagcgggtccagcaccacccagccccggcctcccagtgtccagcccggtgggggagggggaagtggtggaggcggcagtggcggcagtggcagtagtaacag--cagtggaggtggaggtgctggCAAACAGAACGGCGCCACCAGTAAGTGGGAGGACTGCAG------GGGGTTGGGGGGGTCTGGG-ATTGGCTGGC--CTC-TTTTCA-TTCTCTCTTCCCACCCCCAGGTTATAGCTCAGTGGTGGCCGACAGCCCGGCAGAGGTGGCTCTCAGCAGCAGTGGGGGCAGTGGTGCCAGCAGCCAGGCTCTGGGCCCCCCATCAGGTCCCCACAACCCACCTCCCAGCACCTCGTGAGTGTCT-------------------------GGCCTTC------------------------------------------------A-GCCCCTGTCCTTGCC-------AGGAC------------------TTCTCCCACTGGGTTGGGTGTC-GTG-TCCAACTTCTTTCCAGCCAGAACATCGTATACGCCAGTCCCCTAGCTTTGCCCTTTTGACTGTTTTAAAACGT-TCCTTGGTTGATTGGGAGTGCTCACA-GAGTTCCATATG------TCCCCTTTCTGGTGACCTGCCTCAGGCTCACCTGACTCCCCTCAGAG-----------------------------------------------------AGCTGCCGCTCCATACCTCAGGTCAGACCTTTC------------------TCAGAAGATGGCCCCAAGAAAGGG---------AGGAGTG---------AAGAGCTGCTCCCTGGGTCTGCCTCCTTAC-CAGGCTCTGGGTGGGCTGCCCCAAGGGATGGACGCACTTGCCC--TGTGTCCATGCACCTAAG-----------------------------------------------------T---------------------GGAACA-----------------TCCACCTC----------------------------------------------------------------------CCACATGCTCC-----------------CCACCCC------------------ATGTGCCGTCGC--------------------CGCGGCCTGACTCGTCCCTGGAGC-ACCGAGCCCTCTC-------TCCTTCTCTG----CTGCCCAGGAAGGAACCCAGTGCAGCAGCCCCTGCAGGGGCTGGGGGTGTGGCCCCAGGCTCAGGGAACAATACAGGAGGACCCAGCCTCCTGGTGCCGCTTCCCGTGAACCCTCCCAGCTCCCCAACACCTAGCTTCAGTGAGGCCAAGGCAGCTGGCGCCCTGCTCAACGGACCTCCACAGTTCAGCACCGCCCCAGAGATCAAGGTGGGCCCC--AGCTG------------------------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=907990.000000 s hg38.chr19_GL949753v2_alt 124634 319 + 796479 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGCACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT s panTro4.chr19 59058687 319 + 63644993 CTGTGTCCTGACT-------------------CTGTTGTTTCTTTCCTCCAGGTCTCTAGCTGCACCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCTCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTATTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCGGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935334 319 + 60714840 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTTTGTCCCCTTCTGAC-ACTTGCTTTTTCTCCAGGTCTTTCTGTGCCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCATAAGGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700510 319 - 106955855 CTGTGTCCTGACT-------------------CTGCTGTTTCTTTCCTCCAGGTCTCTAGCTGTGCCCC--------------CTGCCCCCACCCTCTTTCTGGA--TCTCTTTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTGTTTCTCCAGGTCTTTCTGTACCACCCTCCCCGTGACCTTGATCTCTGGGGGCTCTCATGCCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTGTACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCTCCCCCGCAGGCCCTCAGTTTCTGTCC-------CCGTTTGTCCTCACAAGACAT i nomLeu3.chr10 C 0 I 118 s rheMac3.chr19 59988545 320 + 64156825 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013260 319 + 59248254 CTGTGTCCTGACT-------------------CTGCTGCTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCAACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCT-GGGGCTCTCATACCTCCCCACTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47119528 320 + 51301725 CTGTGTCCTGACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCgcccc--------------ttgcccccaccccctttctggatctctctctctctagctttCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGCTCTCATACCTCCCCTCTTGTTCCCTCTAAAGCTCTGTTTCTCTgggtctcttttcctttctcttggttATACTTGTTGCTTGCTCTCTCTGGGTCTCCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46826728 320 + 50890351 CTGTGTCCTAACT-------------------CTGCTGTTCCTTTCCTCCAGGTCTCTAGCTGCGCCCC--------------TTGCCCCCACCCCCTTTCTGGATCTCTCTCTCTCTAGCTTTCTGTCCCCTTCTCAC-ACTTGCTCGTTCTCCAGGTCTTTCTGTACCACCCTTCCCGTGACCTTGATCTCTGGGGGTTCTTATACCTCCCCTCTTGTTCCCTCCAAAGCTCTGTTTCTCTGGGTCTCTTTTCCTTTCTCTTGGTTATACTTGTTGCTTGCTCTCTCTGCATCACCATCTTCATCCCCACC-CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCCTCACAAGGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404212 296 + 49145316 CTGTATCCTGACTGCTCTCTGCACTCCAGACATTTCTCACCCTTTCCTCCAGGTCTCTAGCTGTGCACC--------------CTCCCCGC-----CTTTCTGGA--TCTTGCTCTCTGGCTTTCTGTCCCCTTCTCAC-ACTTGCTCTTTCTCCGGGTCTTTCTGCACCACGCTCTCC-TGACCATGATCTCTGGGAGCTCTCATA-CTCCCCTCTTG-TCCCTCTGAAG--CTGTTTCTCTGGG--TCTGTTCCTCTCTCTTGGTT----------------------------TCATCCTCATCTCCCC--CAGGCCCTCAGTTTCTGTCC-------CCATTTGTCTTTACAAAGGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617424 303 - 122678785 CTGTGTCCTTGTC-------------------CTGCCG------TCCTCCTGTACATTTGCTGTCCCCCAACCTGCAGGTCTGCCACCCTCAACTCCTCTGGGGG--------GCTCTGG-----TGTGCTCTCCACACTGCCTGCGCTCTCTCCTGGTCTCTGAGCTCC------TCCACCATCCTGCCCTCTGGGA---CACTTTCCTGTGCTCCTGTTGGGACCTGCCCTCTTGCACTCTGGG-----TTCCCATCATCTCTGTCCCCATTTCTGCTTACTCCTTCAGACAC-CCATCATCCAGCTCACC----ACCATCCTTTTCCCTTCCGAGGGACCGCCTAAATTGAGAAAAC-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 124953 1 + 796479 A s panTro4.chr19 59059006 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935653 1 + 60714840 A i ponAbe2.chr19 C 0 I 116 s rheMac3.chr19 59988865 1 + 64156825 A i rheMac3.chr19 C 0 I 116 s macFas5.chr19 55013579 1 + 59248254 A i macFas5.chr19 C 0 I 117 s papAnu2.chr19 47119848 1 + 51301725 A i papAnu2.chr19 C 0 I 117 s chlSab2.chr6 46827048 1 + 50890351 A i chlSab2.chr6 C 0 I 116 s calJac3.chr22 45404508 1 + 49145316 A i calJac3.chr22 C 0 I 114 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617727 0 - 122678785 C e nomLeu3.chr10 102700829 118 - 106955855 I a score=2255.000000 s hg38.chr19_GL949753v2_alt 124954 34 + 796479 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- s panTro4.chr19 59059007 34 + 63644993 GACTGGTGTACTTTCTGCACAAGTAGAAAGACTG--- i panTro4.chr19 C 0 C 0 s canFam3.chr1 19617727 29 - 122678785 -ACTGATGCCCACTCTG-------GGATGCATTTCAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e ponAbe2.chr19 55935654 116 + 60714840 I e calJac3.chr22 45404509 114 + 49145316 I e nomLeu3.chr10 102700829 118 - 106955855 I e chlSab2.chr6 46827049 116 + 50890351 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I e rheMac3.chr19 59988866 116 + 64156825 I a score=2100.000000 s hg38.chr19_GL949753v2_alt 124988 1 + 796479 G s panTro4.chr19 59059041 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935770 1 + 60714840 G i ponAbe2.chr19 I 116 C 0 s rheMac3.chr19 59988982 1 + 64156825 g i rheMac3.chr19 I 116 C 0 s chlSab2.chr6 46827165 1 + 50890351 G i chlSab2.chr6 I 116 C 0 s calJac3.chr22 45404623 1 + 49145316 G i calJac3.chr22 I 114 C 0 s canFam3.chr1 19617756 1 - 122678785 G i canFam3.chr1 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e nomLeu3.chr10 102700829 118 - 106955855 I e papAnu2.chr19 47119849 117 + 51301725 I e macFas5.chr19 55013580 117 + 59248254 I a score=475045.000000 s hg38.chr19_GL949753v2_alt 124989 151 + 796479 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg--tctgagagggggtgatgtttaagctgaga s panTro4.chr19 59059042 152 + 63644993 TTGGGTGAATGCAGCCTGGTTCCACCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgcggtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935771 152 + 60714840 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102700947 152 - 106955855 TTGGGTGAATGCAGCCTGGTTCCTCCCTGT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccaccgaggggcatctgacctgacctgggagacaggcccaggaagg-ctctgagagggggtgatgtttaagctgaga i nomLeu3.chr10 I 118 C 0 s rheMac3.chr19 59988983 152 + 64156825 ttgggtgAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013697 152 + 59248254 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCagctgcagggaag--gttgctgtgggcccactgaggggcatctgagctgacctgggagacaggcccaggaggg-ctctgagaggtggtgatgtttaagctgaga i macFas5.chr19 I 117 C 0 s papAnu2.chr19 47119966 152 + 51301725 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCAGCTGCCGGGAAG--GTTGCTGTGGGCCCACTGAGGGGCATCTGAGCTGACCTGGGAGACAGGCCCAGGAAGG-CTCTGAGAGGTGGTGATGTTTAAGCTGAGA i papAnu2.chr19 I 117 C 0 s chlSab2.chr6 46827166 146 + 50890351 TTGGGTGAATGCAGCCTGGTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGCACTTgcagggaag--gttgctgtgggcccgctgaggggcatctgagctgacctgggagacaggcccaggaagg-ctctgagagg------tgtttaagctgaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404624 147 + 49145316 TTGGGT-AATGCAGCCTGCTTCCTCCCTTT----AGGAAGCTTC-----CCTGCTGGGGTGTCAgcaggagag--gttgctatgggtcccctgaaggatatgtgacctaacctgggagacagg-ccaggaagg-ctctgtgaggggg---tgtttcagctgaaa i calJac3.chr22 C 0 C 0 s canFam3.chr1 19617757 156 - 122678785 CTGGGTGAATACACCCAGGTCCCGCCTTCTGTACGGGAAGCTGCGTGTGACTGCACGGG-----GCAGGGCAGCACGTGCTGTGGAGCCATAGAAATGTCTTATACTGAACCTGGGGAGGTGGCCCAGCAAGGTCTCTAAGGAGAGA---CCTCTGAGCCGGGA i canFam3.chr1 C 0 I 429 e mm10.chr7 3657015 917 + 145441459 I a score=708773.000000 s hg38.chr19_GL949753v2_alt 125140 330 + 796479 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG s panTro4.chr19 59059194 330 + 63644993 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgtgtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGACAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGATAGGACGGTGGGGTCCTGATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATACTGTAGCGCAGCTTCCATGGGGGGACCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAGTGTGCGCGCCCAGGCTGTCCAGGAGGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55935923 306 + 60714840 cctggaccaggcagaggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatctgcctgggtgcttcggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGCGTCCTGATCATCAAGGGTCAGGAGCTGGGGCTTGGCTCGTGAGCCAGTATACTGTATACTGTAGCGCAGCTTCCACGGGG-------------------------------GGCAGTGTGTATGCCCAGGCTGTCCAGGAGGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701099 316 - 106955855 cctggaccaggcaggggggctaacagctgca------------ggaggggcttc------------aggaggagcctgcatctgcctgggtgcttaggaagctgggcaggatgcagcAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGGTGGGGTCCTCATCATCGAGGGTCAGGAGCTGGGGCTTGGCTTGTGAGCTA-------GTGTACTGTAGCGTAGCTTCCACGGGGGG--CAGTGTGTATGCCCAGGCTGTCCAGGAGGCACTGTGTGCGCCCAGGCTGTCCAGGAGGCAG i nomLeu3.chr10 C 0 I 319 s rheMac3.chr19 59989135 260 + 64156825 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGTGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55013849 260 + 59248254 cctggaccaggcaggggggctaacagctgca------------ggaagggcttcaggaggtgctttaggaggagcatgcatct----------ttaggaggctgggcaggaTGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCTTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120118 253 + 51301725 CCTGG-------AGGGGGGCTAACAGCTGCA------------GGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCGTGCATCT----------TTAGGAGGCTGGGCAGGATgcagcagagaggagagaggtgTCCACTCTGCAGCAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGGTCCTGATCATCCAGGCTCAGGAGCTGGGGCTTGGCCTGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827312 271 + 50890351 cctggaCCAGGCA-GGGGGCTCACAGCTGCAGGAAGGGCTGCCGGAAGGGCTTCAGGAGGTGCTTTAGGAGGAGCATGCATCT----------TTAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGAGAGGTGTCCACTCTGCAGGAGGCAGTGCCACCAGCTGCAGGGCTGAGATAGTGGGTGTAGCAGGACAGGACGG-GGGTTCCTGATCATCCAGGCTCAGGAGCTGGGGTTTGGCTCGTGAGCCA-------GTATCCTGTAGCGCAGCTTCCACGGGG-----------------------------------------------------------AAGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45404771 262 + 49145316 cctggagCAGCCA-GGGGTCTAACAGCTGCA------------GGAGGGGCTTC------------AGGAGGAGTCCGCATCTGCCTGAGTGCTCAGGAGGCTGGGCAGGATGCAGCAGAGAGGAGC-AGGTATCCACTCTGCAGGAGGCAGTGCTGCCGGCTGGAGGGCTGA--------GTGTGGCAGGACAGGAGTGGGGGTTCCTGATCATGGAGGGTCAGGAGCTGGCACTTGGCTCGTGAGCCA-------GGAT-CTGCAGCGTAGCTTCCACAGGG------------------------------AGGTAGTGTGCCCC---------------AGCCTG i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=501838.000000 s hg38.chr19_GL949753v2_alt 125470 188 + 796479 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt s panTro4.chr19 59059524 188 + 63644993 TGTGCGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtg-----ccttcatctgggaaacggcagtagtcacgattatacctactatgtagggttatttggaagactaagtcatcctcataaagctcttggaacagtttctggcccaacagaagcattaattttttt-------------tttttttctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936229 189 + 60714840 TGTGTGTGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtcctttctgtgcctt-ccttcatctgggaaacggcaatagtcacgattatacctactatgtagggttatttggaagactaaatcatcctcgtaaagctcttggaacagtttctggcccaacagaagcattaa---tttt-------------tttttttctttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701734 191 - 106955855 TGTGTGCGCCCAGGCTGTCCAGGTCCAAGTCTTGGCAttgtccttgctgtgcatt-ccttcatctgggaaacggcaatagtcacgattatacccaccgtgtagggttatttggaagactaaatcatcctcataaagctgttggaacagtttctggcccaagagaagcattaa-tttttt-------------tttttttctttttt i nomLeu3.chr10 I 319 C 0 s rheMac3.chr19 59989395 190 + 64156825 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattAA---tttt-------------tttttttctttttt i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55014109 190 + 59248254 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatatgggaaatggcaataatcacaattatacctaccatataggtttatttggaagactaaatcattcttacgaagctattggaacagtttctgacccaacagaagcattaa---tttt-------------tttttttctttttt i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47120371 190 + 51301725 CATGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCATTGTCTTTTCTGTACCTTCCCTTCATCTGGGAAATGGCAATAATCACGATTATACCTACCATATAGGTTTGTTTGGAAGACTAAATCATTCTTACGAAGCTATTGGAACAGTTTCTGACCCAACagaagcattaa---tttt-------------tttttttttttttt i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46827583 203 + 50890351 CGTGTGCGCCCAGGCTGTCCGGGTCCAAGTCTTGGCAttgtcctttctgtgccttcccttcatctgggaaatggcagtaatcacgattatacctaccatataggtttatttggaagactaaatcattcttatgaagctattggaacagtttctgacccaacagaagcattaa---ttttatttttatttttatttttttttttttt i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45405033 172 + 49145316 ------------------CCAGGTCCAAGTTTTGGCAttgtcttttctgtgcttg-ccttcatctgggaaatggcagtgat-atgatgataactaccatacagggttatttggaagagcaacttactatggcagagctcttggaacagtttctggcccaacagaggcattcg-attttt-------------tttttttttttttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=439776.000000 s hg38.chr19_GL949753v2_alt 125658 210 + 796479 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcaatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcaggtcttgaactccg s panTro4.chr19 59059712 210 + 63644993 gagacagagtcttgctctgtcacccaggctggagtgcagtggtgcgatctcagctgaatgcaacatccgcctcctgggttcaagcgattctcctgccgcagcctactgagtagctgggattacaggcacctgccaccacgccaggctaatttttgtatttttaatagagatggggttttgccatgttggtcaggcgagtcttgaactcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936418 209 + 60714840 gagacagagtcttgctctgtcacccaggctggagtgcagtagtgcgatct-ggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctactgagtggctggtattacaggcgcctgccaccacgccaggctaatttttatatttttaatagagatggggttttgccatgttggtcaggcgggtctcaaacccct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102701925 209 - 106955855 gagacagagtcttgctctgtcacccaggctggtgtgtagtagtgcgatct-ggctcgctgcaacctccacctcccgggttcaagcgattctcctgcctcaccctactgagtagctgggatcacaggcgcctgccaccacgccaggctaatttttgtgattttcatagagatggggttttgccatgttggtcaggcgggtctcgaactcct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55014309 209 + 59248254 gagatggagtcttgctctgtcaccgaggctggagtgcagtggtgccatct-ggctcactgcaagctctgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47120562 209 + 51301725 gagatggagtcttgctctgtcactgaggctggagtgcagtggtgccatct-ggctcactgcaagctccacctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctagtttttgtatttttagtagagatggggtttcaccatgttggtcaggtgggtctggaactcct i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46827787 209 + 50890351 gagatggagtcttgctctgtcaccaaggctggagtgcagtggtgccatct-ggctcaccgcaagctccgcctcccaggttcaagtgattctcctgcctcagcctactgagtagctgggactacagatgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggcgggtctcgaactcct i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45405205 203 + 49145316 ----gagagtcttg--ctgttacccaggctggagtgcagtcgttcagtctcagttcactgcagtctccacctcccgggttcaagtgagtctcctgcctcagcctcccaagtagctgggattacaggtgccaaccacc-cacctggttgatttttgtatttttagaagagatggggtttcaccatgtgggtcaggcagggcttgaactcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e rheMac3.chr19 59989585 347 + 64156825 I a score=1174031.000000 s hg38.chr19_GL949753v2_alt 125868 399 + 796479 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCAACAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC s panTro4.chr19 59059922 399 + 63644993 aacctcaggtgatccacccacctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAGTGCGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAGAA-GGGGTCCATATCTTTTAACACCACCACCAACAAAAATGAATCACTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCTTGGGCTGTGTGGGACATGGTGGCACGACAGGGAAGGGAGCCATCCAGTGGGGTTTAGAAGCAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55936627 399 + 60714840 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGATGGGATATTTATAGTGCGTGCATCTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATATCTGTTAACACCACCACCAACAAAAATGAATCGCTGGGGTGGGTGGTCGGGAGCCATGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACAGGCCTGGGCTGTGTGGGGCATGGTGGCGTGACAGGGAAGGGAGCCATCCAGTGGGGGTTACAAGCAGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702134 400 - 106955855 aacctcaggtgatccacccgcctcgacctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccCAAATTTTAGAAGTA-GGTGGACAGGATATTTATAATGTGTGCATTTTTCTGGAAAAA-GGGAAACAGCAGCTTTGAGGTTTTCAAAATGGGTTCCATATCTTTTAACACCACCACCAACAAAAATGAATTGCTGGGGTGGGTGGTCGGGAACCATGGCAAGGTTTGGAGTAGAGAAGGAACAACGTGACTTAATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGCAGGAGAGGACGGGCCTGGGCTGTGTGGGGCATGGTGGCATGACAGGGAAGGGAGCCATCCAAGGGGGGTTAGAAGCACGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59989932 401 + 64156825 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55014518 401 + 59248254 aacctcaggtgatctgcccgccttggcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGACAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47120771 401 + 51301725 aacctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctggcccaaattttAGAAGTATGGTGGACAAGATATTTATAGTGCAtgcatttttctggaaaaagggGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAAGGTTTGGAGTAGAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCTGGGGCTGGTGAGGACAGGATAGAGAGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGcgtggggcgtggtggcgtgaCAGGGAAAGGAGCCATCCAAGGTGGCTTAGAAGCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46827996 396 + 50890351 aacctcaggtgatctgcccgcctcagcctcccgaagtgctgggattacaggtgtgagccaccgtgcctggccCAAATTTTAGAAGTATGGTGGACAAGATATTTATAGTGCATGCATTTTTCTGGAAAAAGGGGAAACAGCAGCTTTGAGATTTTCAAAA-GGGGTCCATACCTTTTAACATCACCACCAACAAAAAGGAATTGCTGGGGTGGGTGGTCGGGAACCGTGGCAGGGTTTG-----GAGAAGGAACAACATGACTTCATTGGAAAGGTCCCCCGGGGCTGGTGAGGACAGGATAGAGGGAGGGTGGTCTGGGTAGGAGAGGACAGGCTTGGGCTGCGTGGGGCATGGTGGCGTGCCAGGGAAAGGAGCCATCCAAGGTGGGTTAGAAGCAGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405408 370 + 49145316 gacctcaggtgatccacccacctcagcctcccaaagtactgggattacaggcttgagccaccgcacccagccCAAA-TTTAGAAGTACTGTGGACAGGAAA--CATACTGTGTGCATTTTTGTGGAGAAA-GGGAAACA--AGCTTTGAGATTTTCAAGA-GGGGTTCATACCTTTTGACACCACCACCAGCAAAAATGAATCACTGGGGTGGGCGGTCAGGAACTATGGCAAGGTTTGAAGTAGAGAAGGAACAACCTGACGTCATTAGAAAGGTCCCCTGGGGC---TGAGGACAGGATAGAGGGTGGGTGGTCTGGGCAGGAGAGGACAGGCCCGGGCTGTGTGGGGCATGGTGGCATGACAGG----------------------TTAGAAGCAGGAC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=285119.000000 s hg38.chr19_GL949753v2_alt 126267 117 + 796479 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGAAT s panTro4.chr19 59060321 117 + 63644993 GGATAgctgggcgtggtggctcacacctgtaatcccagctcttagggaggcagaggcgggaggatagcttgagcccaggagtttgagacctgcctgggcgatatagcgagacAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937026 117 + 60714840 GGATAgccgggcacggcggctcacatctgtaatcccagctcttagggaggcacaggcgggaggatagcttgagcccaggagtttgagacctgcttgggcgatatagcgagacAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702534 117 - 106955855 AGATAgccgggtgcggtggctcacgcctgtaatcccaactcttagggaggcagaggcgggagggtagcttgagcccaagagtttgagacctgcttgggcgatatagcaagacAGGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59990333 117 + 64156825 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55014919 117 + 59248254 GGATAgccgggcgcggtggctcacacctgtgatcctagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgatacagcaaaacAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121172 117 + 51301725 ggatagccgggcgcggtggctcacacctgcgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcctgggcgaTACAGCAAAACAGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828392 117 + 50890351 GGATAgccgggcgcggtggctcacacctgtgatcccagctcttagggaggcagaggcaggaggataacttgagcccaggagtttgagacctgcccgggcgatacagcaaaacAGGAT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e calJac3.chr22 45405778 0 + 49145316 C a score=593260.000000 s hg38.chr19_GL949753v2_alt 126384 227 + 796479 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTTGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTGCGGGGCTGGAGACCCAACCTACCTGTTTCCAGCAAGGAGACTGAAGCCTAGCCGGGCTGGGCCCACCCCG s panTro4.chr19 59060438 227 + 63644993 GGATAAGCCTTGGCGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCGTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGTAACGAGGCTGTGGCTGCAGGGCTGGAGACCCAACCTACCTGTTGCCAGCAAGGAGACTGAAGCCTAGCCGAGCTGGGCCCACTCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937143 227 + 60714840 GGATAAGCCTTGGCGACTGACTTGTTGTGGAGAGTCCAGCACAGAGTTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGACGCTGTGGCTGCAGGGCTGGAGACCCCACCTACCTGTTGTCAGCAAGGAGACTGAAGCCTAGCCGGACTGGGCCCACCCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102702651 177 - 106955855 GGATAAGCCTTGGTGACTGACTCGTTGTGGAGAGTCCAGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCTGGAGGAGATGGGAGGAACCAGCCCTGACTTTGGGAAACAGATGCCTGCCGTAACCTTTGTAATAGGAAACGAGGCTGT--------------------------------------------------GCCTAGCCGGGCTGGGCCCACCCCG i nomLeu3.chr10 C 0 M 981 s rheMac3.chr19 59990450 224 + 64156825 GGATAAGCCTTGGCAACTGATGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015036 224 + 59248254 GGATAAGCCTTGGCAACTGATGCTTTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACACGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGTCTAGCAGGGCTGGGCTCACCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121289 224 + 51301725 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGGTGCACGTGGCCAGAGGAGAT-GGAGGAACCAGCCCTGACTTTGGGGAACACAAGCCTGCTGTAACCTTTGTAATAGGAAACAAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828509 224 + 50890351 GGATAAGCCTTGGCGACTGACGCATTGTG--GAGTCCCGCACAGGGCTGGGGTTAGGGACAGCTGCACGTGGCCGGAGGAGAT-GGAGGAACCAGTCCTGACTTTGGGGAACAGAAGCCTGCTGTAACCTTTGTAATAGGAAACGAGGCTGTGGCTACAGGTCTGGAGACCCAGCCTACCTGTCGCCAGCAAGGAGACTGAAGCCTAGCAGGGCTGGGCTCACCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405778 210 + 49145316 GGATAAGCCTTGGTGACTAAAGCATTGTGGAGAGGACAGCACAGGGCT-GGGTTAGGGACAGCTGCCCATGGCCAGAGGAGAT-GGAGGAACCAGGTCTGACTTTGGAGAACAGAAGCCTGCTGTAGCCTTTGTAATAGGAAAGGAGGCTGTGGTGGTAGGGCTGGAGGC---------------TCAGCAAGGAGACTGAATCCTAGCAGGGCTGGGCCCATCCCA i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I a score=906292.000000 s hg38.chr19_GL949753v2_alt 126611 405 + 796479 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGGGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC s panTro4.chr19 59060665 405 + 63644993 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCGGCGTAGTATTCCATGCTGCAGAGTCCCACTCACGAGACGTTCCTCTGCTGATGAATGCGTC-GTGGTCTCCGATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATTGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAAACAGGGCAGGTGAGAGCATCTGGGGCCTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937370 406 + 60714840 ATTCCAGTCACCCCATGCCAGTCACAGGCAGACAGCTGAGCATGTAGACCTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAACGTGTAGGTGTCCCTAGTGAAGGAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCACACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTATTTTGAAAATCTCTGCGTAGTATTCCATGCTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTGGTTTCCAATTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCGTGAGGAGTGGGTCGTTGGCCCTCCACGGCCCCCAGACAAGGCAGGTGAGAGCATCTGGGGCCTGTGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59990674 406 + 64156825 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015260 406 + 59248254 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGAGAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACATAATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGTGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121513 405 + 51301725 ATCCCAGTCACCCCATGCCAGTCAGAGGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCGTGCAGTATTCCACGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCGTTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATAAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCAAGCGCATCTGGGACCTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46828733 405 + 50890351 ATCCCAGTCACCCCATGCCAGTCAGAAGCAGACAGCTGAGCATGTAGA-CTCCTGCCTCCTTCAAGACAGGCGGGAGCTCTCCCAGCATGTAGGTGTCCCTAGTGAAGCAGCGTGTACTATTGGCACATCCTTTGACAAAAATGGTAGCGCACTGTACAT-ATTCTGCAGGTTGGCGTTTACTTCTGTAGTATGTCACGAACTTGTGTTTTGAAAATCTCCATGCAGTATTCCATGGTGCAGAGTCCCACTTACTAGACGTTCCTCTGCTGATGAATGCGTCAGTCATTTCCAGTTGTTTCCCTACAGTTTGATGCTTTTACCTGTCATGGGTAGATCATGAGGAGTGGCTCATTGGCCCTCCACAGCCCCCAAGCAGGGCAGGCGAGCGCATCTGGGACCTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45405988 365 + 49145316 ---CCCGTCACTCCATGCCAGTCAGAGGCAGACGGCCGAGCATGTAGTCCTCCTGCCTCCTTCAAGACAGGCGGGGGCTCTCCC-------------------------AGAGTGTACTGTTGGCTCATCCTCTGACAAACA--GTAGCGCACTGTAGGT-GTTCTGCAGGTTGGCATTTTCCTCTGTAGTAGGCCACAAACTTGTGTTTTGAAAATCTCTGCGCCGTATTCCATGGTGTAGAGTCCCACTTATTAGACGTTCATCTGCTGATGAGTGCGTCAGTGGTTTC---------CCCCTCAGGTTGATGCTTTTACCTTTCATGGGTAGATCACGAGTAGTGGGTCACTGGCCCTCCATAGTCTCCCAACA--GCAGGCGACAGCATGTGGGGCCTGCGTC i calJac3.chr22 C 0 C 0 e mm10.chr7 3657015 917 + 145441459 I e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=112262.000000 s hg38.chr19_GL949753v2_alt 127016 45 + 796479 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT s panTro4.chr19 59061070 45 + 63644993 AGGCTGCACTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937776 52 + 60714840 AGGCTGCACTTGCTCCTGCAGCCCCAG---TGCTCAGGCC---AGGCCTCGCTTCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991080 45 + 64156825 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015666 45 + 59248254 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121918 45 + 51301725 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829138 45 + 50890351 AGGCTGCACTTGCTGCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406353 45 + 49145316 AGGATAAGCTTGCTCCTGCAGCCCAAG---TGCTCAGGCC---AGGCCT-------TT i calJac3.chr22 C 0 C 0 s mm10.chr7 3657932 54 + 145441459 AGGCTGAACATTTTTATGCAGCTCAGTCTCTGCTCAGGTCCTGAGACTTAAC----CC i mm10.chr7 I 917 C 0 e canFam3.chr1 19617913 429 - 122678785 I e nomLeu3.chr10 102702828 981 - 106955855 M a score=869051.000000 s hg38.chr19_GL949753v2_alt 127061 265 + 796479 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCA--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC s panTro4.chr19 59061115 265 + 63644993 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACCGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGCGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCT--CCCTCCCCACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55937828 266 + 60714840 TGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATCGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCT-GCCCCTGACCCATCCTCACCACTGAGGGGGCCGGA----------CCCCCAC-CCCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCCCAGCCGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59991125 266 + 64156825 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015711 266 + 59248254 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47121963 265 + 51301725 CATTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCTATCCTCACCACTGA-GGGGCCGGA-----------CCCCAC-CTCTCCCCACAGACATCATCCTGAGCAGCACATCAGcacctccagcctcagctcagcCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829183 267 + 50890351 CGTTTCCTCCC--CAGGCCCCTGAGC---CTCTGAGCTCCTTGAAGTCCATGGCGGAACGGGCAGCCATCAGCTCTGGCATTGAGGACCCTGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGAACCCAGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGGCTGGCCCCTGACCCATCCTCACCACTGA-GGGGCCGGA----------CCCCCCCGCTCTCCCCACAGACATCATCCTGAGCAGCACATCAGCACCTCCGGCCTCAGCTCAGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406398 265 + 49145316 GGTTTCCTCCC--CAGGCCCCAGAGCAAACTTTGAGCTCCTTGAAGTCCATGGCAGAACGGGCAGCCATCAGCTCTGGCATTGAGGATCCCGTGCCAACGCTGCACCTGACTGAGCGAGGTGAGGGTCCCGGGATGGTGGGGAAGCAGTGGGCCAAAGAGGAGGGACTGGCCC--GACCCATCCTCACCACTGAGGGGGCCA-------------CCCCCC-CTTTCCCCACAGACATCATCCTCAGTAGCACATCAGCACCTCCGGCCTCAGCCCAGCCACC i calJac3.chr22 C 0 C 0 s mm10.chr7 3657986 255 + 145441459 CTTTCTCTTCC--CAGGCCCCTGAAC---CACTCAGCTCTCTGAAATCCATGGCAGAACGGGCAGCTATCAGCTCTGGTATTGAGGACCCTGTGCCAACGTTACACCTAACTGATCGAGGTGACAGTTATGGGATTGTGGGGAGGGCAAAGGCCAAAAAGGAG---CTGACCC------CATCCTCATCATTGA-AGTGCTTAA----------TGGCC---TCTCCCCTGCAGACATCATCCTGAGCAGCACATCAGCACCACCCACCTCATCCCAGCCACC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618342 273 - 122678785 TGTCTTCTCCCCACAGGCCCCGGAAC---CTCTGAGCTCTCTCAAGTCCATGGCAGAGCGGGCAGCCATCAGCTCCGGCATCGAGGATCCTGTGCCAACGCTGCACCTAACCGAGCGAGGTGAGGGTCTGGGTGAGGCGGGGGCGGGGGCGGCCAGGCAGGTGTAACG-GCAC--ACTCCAGCCTCACCG--GA-GGGCCTGGCCCTGCCACACCCCCCAC-ACCGCCCTGCAGACATCATCCTGAGCAGCACGTCCGCCCCACCAGCCTCAGCTCAGCCGCC i canFam3.chr1 I 429 C 0 e nomLeu3.chr10 102702828 981 - 106955855 M a score=6174823.000000 s hg38.chr19_GL949753v2_alt 127326 1637 + 796479 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATTCGGTGAGGGGCCACAGGGAAGGGGGATGGTC-TGGGACT--TGAGTCTTACGGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCACGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCTCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAATTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCGCCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCC--CAGTCTAGGCCGACCCCACTCTGCTCATCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGATCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTTGCCTCCACCTTTCAGCTGGCGCAGTCCCTCAGCCTGACCAAGTACT-CCTCCCTCTGgctgtctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc s panTro4.chr19 59061380 1639 + 63644993 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTCTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTGCCCCAAATCCACCTGTCCCCGTCCCCCGCTTCCAGCCCAGAGATGTTAGAACTGCTTGGGTTGACAGCGAGGC--TGGTCCACTGAGGCACACCTCAGCCCCGCTTCCAGTTGCCCACTGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAGCTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGGCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATTCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcagcctgaccaagtact-cctccctctggctggctgctcagcctggaacaccgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55938094 1635 + 60714840 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCTGAA-CCTGTGAGGCTGTGGGT--AGAGCACCAGGCCCCTGACTTGGGCTCTCCA----CTGAAGGTCAGCACCACCCCGGGTCTTTCTGTACCACCTCCCCCCG-CAGGG-ATGCATGTCTGAGCACCCTTTTGATCAGGACAGGAC----------------------CAGTAGGCAG------CTGGCGC-----TGA--CCTACCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCCACCTGTCCCTGTCCCC-CCTTCCAGCCCAGAGGTGTTAGATCTGCTTGGGTTGGCAGCGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGTTCACCGGCTCACCC--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCTGACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAAGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGGTGGcctctgctccctcgcctccacctttcagctggcgcagtccctcaacttgaccaagttct-cgtccctctggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtaggtctcagcccaaatgtc------ccttcctcaaagaagccttcctggagccacccagcccagtgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102703809 1635 - 106955855 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTATCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGGCCACAGGGAAGGGGGATGGGC-TGGGACT--CGAGTCTTAGCGAGGAGGCAGTG---GCCGAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACCTGGGCTCTCCA----CTGAAGGTCAGCACCGCCCCGGGTCTTTCTGTACTACCTTCCCCCG-CAGGG-ATGCATTTCTGAGGACCCTTTTGATCAGGACAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCACTCCTGGG--------CCCCTCCCCCAAATCAACCTGTCCCTTTCCCCCCTGTCCAGCCCAGAGGTGTTAGAACTGCTTGGGTTGACAGTGAGGC--TGGTCCACTGTGGCACACCTCAGCCCCGCTTCCAGTTGCTCACTGGCTCACCT--GCGGCCCCTCCCCAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCAACCCCACTCTGCTCGTCGGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGCCCCCTCTCAACCCCAGTGAGTCATGAGTGATCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTT---CTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCAA-AGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTTAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCCCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTCGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCTGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCTCCCTCGCCTTCACCTTTCAGCCGGCGCAGTCCCTCAGCCGGACCAAGTTCT-CCTCCCTCTGgctgtctgctcagcctggaccaccaccctctcatcctccacttggccagctcctaggcctcctgtaggtcttagcccaaatgtc------ccttcctcaaagaaaccttcctggagccacccagcccagtgcctc i nomLeu3.chr10 M 981 C 0 s rheMac3.chr19 59991391 1630 + 64156825 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTG--------CCCCCTACC-CCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTACTCCCAGTCCTGGG----CCCCCCCCCCCGCCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGCACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTCATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55015977 1642 + 59248254 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGTCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGGTCAGGGCAAGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTAGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG-CCCCCCCCCCCCCCACCAATTCAACCTGTCCCTGTCCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTTCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTCCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCGCTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCGTCCCCCTGGCTCCCCACCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGCGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCcggcgcagtccctcagcctgaccacgttct-cctccctcgggctgtctgctcagcctggaacactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttcctc--agacaccttcctggcgccacccagcccggtccctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47122228 1643 + 51301725 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCGCTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAGGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTAGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCTTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGCAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAgggcccccggggcagcctcgggccccccggcttcgccgccaccgccgccgtcccccctcgggcTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCTGGG--ccccccccGCCCCGCCAATTCAACCTGTCCCTGTCCCC-ACTTCCAGTCCAAAGGTGTTAGAACTGCTCAGATTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCTAGCCCTGCTTCCAATAGCTTACTGGCTAACCCATGGGGTCCCCCCACAGCCCTGCTGCAGCAGCCCCTCAGTCTAGGCCGACCCCACTCCACTCGTCGGC------CATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCCAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACAttagtttttcttccttctcaaagCTTCTCTGAAAGCAATTTTCACCTCctgtctcattttccttctcctgaCCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGccctgatgtcctgccccgtccccctggctccccacccagtttgggggccccctgatccccctctccactgttcctcccccaGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCGCCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCGCCCTCGCCTCCACCTTTCAGCCGGTGCAGTCCCTCAGCCTGACCACGTTCT-CCTCCCTCGGGCTGTCTGCTCAGCCTGGAACACTGCCCTCTCATCCTCTACTTGGCCAGCTCCTAGGCCTTCTGTGGGTCTTAGCCCAAATGTC------CCTTCCTCAAAGACACCTTCCTGGCGCCACCCAGCCCAGTGCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46829450 1629 + 50890351 CCTGCAGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCTGAGCGTATCCGGTGAGGGCCC-CAGGGAAGGGGGGTGGGC-TGGGGCT--CGAGTCTTAGCAAGGAGGCAGTG---GCTAAA-CCTGTGAGGCTGTGGGT--AGAGCGCCAGGCCCCTGACTCGGGCTCTCCA----CTGAAGGTCAGCACCGCCCTGGGTCCTTCTGTACCACCT-CCCCTG-TGGGG-ATGCAGTTCTGAGCACCCTTTTGATCAGGGCAGGAC----------------------TAGTAGGCAG------CTGGCAC-----TGA--CCTTCCTGTTGCTCCCACAGGCAGTACCTCCCCCGGAACCCCTGTCCGACGCCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCAGGGCAGCCTCGGGCCCCCCAGCTTCACCGCCACCGCCACCGTCCCTCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCTCAGT--------------CCCCACCGCCAATTCAACTTGTCCCTGTTCCC-GCTTCCAGCCCAAAGGTGTTAGAACTGCTCGGGTTGAGAGCGAGGC--CAGTCCACTGTGGCTCACCCCAGCCCTGCTTCCAATAGCTTACTGTCTAGCCCATGGGGCACCCCCAGATCCCTGCTCCAGCAGCTCCTCAGTCTAGGCCAACCCCACTCCACTCGTCAGC-----ACATTCTCAGGCCTCCCTGGAGGCCACTGGGGAACTGTCCAACCTCCTCCCAACCCTAGTGAGTCATGAGTGACCTCCACCCTCATCCCCACTTGGGAAATTTTCTAAATTGCCTCCTCTCTCAGCTCTCATCACACATTAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAAGCAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATT-GGTATGTTCTGTGCCCCCAGCCCCATCTCCACGAGGATTGTCCAGCCCAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAGCCCTGATGTCCTGCCCCATCCCCCTGGCTCCCCAGCCAGTTTGGGGGCCCCCTGATCCCCCTCTCCACTGTTCCTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGTTTGAGCAGGTGAGGGCCCCACCCCCT-CTCTTCCCGCTGCTAGGGTTGGGGTAGAGTCCCCAGGCTC--CAGGCAGCCCCTGCTGGCCTCTGCACCCTCGCCTCCACCTTTCAACCGGCGCACTGCCTCAGCCTGACCACGTT----CTCCCTCGGgctgtctgctcagcctggagcactgccctctcatcctccacttggccagctcctaggcctcctgtgggtcttagcccaaatgtc------ccttccacaaagacaccttcctggcgccacccagcccggtgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45406663 1584 + 49145316 CTTGCAGCTGTCAGAGGTCAACATACCGCTGTCGCTGGGTGTCTGTCCACTGGGCCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCTCATCCCTCTGATTCTGAGCGTATCCGGTGAGGGGCCGCAGGAAAGGGGGTTGGGC-TGGGACT--CGAGTCTTAGTGAGGAGGCAGGG---GACAGA-CCTGTGAGGCTGTGGGTCAAGGGGGCCAGGCCCCTGACCTGGGCTCCCCA----CTGAAGGTCAGCACTGCCCCAGGTCTTTCTGTACCAACCGCCCCCGCCGGGG-ATGCGTTTCTGAGCACTC--TTGATGAGGGCAGGAC----------------------TGGCAAGCAG------CTCACAC-----TGA--CCTTCCTGATGCTCCCACAGGCAGTACCTTCCCCGGAACCCCTGTCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCGACTGAGACACTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACTGGGACCGCACCCCCTCCCTATTCCCAGTCCCGGGCCCCCCAGCCCCCTATCTAAATCAGCCTGTGCCTGTTCCC-GCTTCCAGCCCGGAGGTGTTAGAACTGCCTGGGTT------GAGGC--CAGTCGGCCGCAGCATGCCCCAGCCCCGCTTCCAGTGGCTCACTGGCTCACCT--GCAGCCCCTCCCCAGCCCTGATCCAGCAGCCC--CAGTCTAGGCTGACCCCACTCTGCTCATCAGC-----ACATTCTCAGGCCTCCCTGGAGACCACTGGGGAACTGTCCAGC---------------------------------CCACCCTC--CCCCCCTTGGGAAATCTTCTGAATCGCCTCCTCTCCCAGCTCTCATCACACAGCAGTTTTTCTTCCTTCTCAAAGCTTCTCTGAAATTAATTTTCACCTCCTGTCTCATTTTCCTTCTCCTGACCAGCATTGGGTATGTTCTGTGCCCC-----------------AGATTGTCCAGCTGAACTGTGGTCTGTGGCGGGGGCCGGGGTTCAG-CCTGATGT-CTGCCCTGTCCCCCTGGCTCCCCACCAAGTTTGGAGGGCCCCTGATCCCCTTCTCCACCTTTACTCCCCCAGGGCACTAAGGCACAGTACCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGATTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGATGAGTTTGAGCAGGTGAGGGCCCCGCCTCCT-CTCTTCCTACTGCTAGGGTTGGGGTGGAGTCCCCAGGCTC--CAGGCAGTCCTTGCCAGcctctgctcccttgcttccacctttcaggtggtgcagtccctcggcctgaccaagctctgcttcactcaggctgtttgctcagccaggagaactg-cctttcctcctccagttggctggctcctaggcctcctgtaggccttagcccaaatggc------ccttcctc--agagaccttcccagagccacctggcccagtgtctc i calJac3.chr22 C 0 C 0 s mm10.chr7 3658241 1507 + 145441459 CCTGCAGCTGTCAGAGGTGAACATACCATTGTCACTGGGTGTCTGTCCACTGGGGCCAGTTTCCCTCACCAAGGAGCAGCTATACCAACAGGCCATGGAAGAGGCCGCCTGGCACCACATGCCCCACCCCTCTGACTCCGAGCGCATTCGGTGAGGGGCT-GGAGAAAGGGCTGGGGAC-CGGGACTCCCCAGTCTGAGGGAGGAGCTGGTT---CCTGGGTCCTGAGAGAC--TAGGT--AGAGTACTCG---------------TCTCAAAGTGCTGAGGAC-----TTGACTTGGGGCTCCCTAAAGCAG--------G-TTGAA-GTGTGCTTCTGAACACTCTCCTG---AAGGCAGGGC----------------------TGGAGCTCAGAGCCTCCTGGCAC-----TAAATCCTCACTGGT----CCACAGGCAGTACCTCCCCCGGAACCCTTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACTGTGGAGTTCTACCAGCGCCTGTCAACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCAGCTCCGCCGCCACCGCTGCCATCCCCCCTCGGGCTGGAGGGGCGAGGTGGGTGTCCCACTGCGGCCACTGGGACCGCA-CCCCTCCCTA-TCCCAGTCTTGGG----------CCCCCTCAAATTAAACCTGACCCAGTCCCA--------------AAACATTCTAATTGCTAAGATTCAGGGAGAGGCTGCAGGCC-CTAGGCCATGTACAGTTTCCACTGCCAAGAGCT------CTCAGCT------------------CCTG----GGAAACCCTTTAGTTTAGGATAG-------TTGCTGAAGTGCAGTAGACACTCCCAAG---ACCTAGAGACCTCTGCAGAACTGTCTGAC---CTCTTAACTGCAGTGGGTCAG--------CCCCTCCCCATCTCCTCCTGAG---TTTTCTACTTCGTCTCCTTT--CAGCTTTCATTATGCATTAGTTTCTCTTCTTTCTCAAAGCTTTTCTGAAAGCAATTCTCACCTCCTGTCTCATTTTCTT----CTGACCA----T-GGTATGTTTTGTGCTCCCAGCACTGTCTCCAAGTGGACTCTCCA---CAGC--TGGTCTGTGGTGGGGGTCTGGGTCCAGCCCTGATGCCCTGCCCTTGTCCCCCTGCTAGCTACTCAATTTGGATACCTTCTGATCTTTC-CTCTGCATTTTCTTTCCCAGGGAACCAAGGCACAGTACTTGGCAGCCAAGGCCCTAAAGAAGCAGTCCTGGCGATTCCACACCAAGTATATGATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGGCCCGTCCAAC-CTGGGCCCACTG---GGGTATGGCTAGTGTACCCAATCCCAACCCTCAATCCTTGCTGGCCTTT-CTCCTTTG----------------GGCACAGTCCTGTAGACTGACCAAGCT---GGTTCCCTAAGTGGTTCACCTAGCCTGGGATACTGTC----CATCTCCCATTTGTCCATTTCTTAG---TGCTTTAGTTTTGAGT-----TGTCGTTACTGCTTCCAAAGAGAAGCCTTCTTGGAACT-----GCTAACTGCCTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19618615 1384 - 122678785 CCTGCAGCTGTCAGAAGTGAACATCCCGCTCTCGCTGGGCGTGTGTCCCCTGGGGCCTGTGCCCCTCACCAAGGAGCAGCTCTACCAGCAGGCCATGGAAGAGGCCGCCTGGCACCATATGCCCCACCCCTCAGACTCCGAGCGGATCCGGTGAGGGACC------AAGACCCCTGAGCGTGGGGAG--GCAGCCCTGATGGGGGGGTATGGTTCCCCAGT-CCTGAGACACTGTGTGA--AG-----------CTTGCTGCTGGTCCTCCA--TGCTG-GGGTGA---------TGGGTACCTGGAAGCTCCCTTGATCCG-TGGGGTGGGCGGCTGTGGTCAC-------ATCAGGTCTAGATTTCTACCCCCACCTCGAGACCGTGGGAATCAT------CAGGCACTAGAATAA--GCCTCCTCTCGT--CCACAGGCAGTACCTCCCCCGGAACCCCTGCCCGACACCCCCCTACCACCACCAGATGCCACCCCCACACTCGGACACCGTGGAGTTCTACCAGCGCCTGTCGACTGAGACGCTCTTCTTCATCTTCTACTATCTGGAGGTACAGCAGGGCCCCCGGGGCAGCCTCGGGCCCCCCGGCTTCGCCGCCACCGCCGCCGTCCCCCCTCGGGCTGGAGGGGTGAGGTGGGTGCCCCACTGCGGCCACAGGGACCGCACCCCCTCCCTGTCCCCAGTCCTGCC---CTCCCCTCACCCCCCAGGCAAACCTGTCCCCATCCCC-ACTTCA--------------------GCTCAGGCT-------AGGT--TTGTCCACTGTGG------------------------------GGGCTTG-----GGAGCCCCCGCCC-------CTCCGGCCTCC------TGTGGGTGTGCCCCGGTATCCGTCACAGT-----GCAGTCACGG---CCTCTGGAGGCCACTAGAGAACTGTCC--CCTCTGCATGACCCCAGGGAGTTA-GAACCAGCCCCACTCTCATCCTGCCCTGGGAAGCTTCCTGAACTGCCT---------GCTCTCAACACGCAGTAGTTTCTTTTCCTTCTCAAAGCTTCTCTGAAAGCTATT----------------------TCTTCCTGACCAGCAGT-GGTATGTTCTGTGTCCCCA--CCCATCTCCACCTGGACTGTCCAGCCCACCCTCGGTCTACGGCGGGGCCCGGG--TCAGCCCTGATGCCCTG-----TGCCCCTTGCCCCC--ACCAGTTTGGGGGCCCCCTGATCCTTGGCTCCTCCCTTCCTCCCCCAGGGCACAAAGGCGCAGTATCTGGCAGCCAAGGCCCTAAAGAAGCAGTCGTGGCGGTTCCACACCAAGTACATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACAGATGAGTTTGAGCAGGTGAGGGCCCCTCGCTGTGCCCTGCCCAC--------------------CCCCAGGCCC--GTGGTCGTC--------------------------------------------------------------GTCCT-CTTCCTCCGGCCCCATTGCT---------------------GGTCCTCCCCTGGGGCATCACCATGG-----------------------TGTC------CCGTCCTC-----------CGGGGAGGCACCTGGCCTATCGTCTC i canFam3.chr1 C 0 C 0 a score=345932.000000 s hg38.chr19_GL949753v2_alt 128963 123 + 796479 ccctttgcagtgctgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgccgagggaccttgat-ggcccccacttcacctccaggtccca s panTro4.chr19 59063019 123 + 63644993 ccctttgcagtactgggcacactcgcttggggtgtgggattttcccagtatgtgtccctgcaccaggctgtgggctttgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55939729 118 + 60714840 cccctcgcagtgctgggcacactcgcttggggtgtggga-tttcccagtatgtgtccctgcgccaggctgtgggctctgctgcccagggaccttgat-g---cccacttca-ctccaggtccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705444 123 - 106955855 ccccttgcagtgctgggcacactcgcttggggtgtaggattttcccagtatgtgtccctgcaccaggctgtgggctctgctgcccagggaccttgat-ggcccccacttcacctccaggtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993021 123 + 64156825 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55017619 123 + 59248254 ccccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgatgggcccccctttcacctccaggtccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47123871 122 + 51301725 CCCCTTGCAGTGCTGGGTACACTCGCTT-GGGTGTGGGATTTTCCCGGTATGTCTCCCTGTACCAGGCTGtgggctctgctgcccagggacCTTGAT-GGCCCCCCTTTCACCTCCAGGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831079 122 + 50890351 ctccttgcagtgctgggcacactcgctt-gggtgtgggattttcccggtatgtctccctgtaccaggctgtgggctctgctgcccagggaccttgat-ggtccccctttcacctccaggtccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45408247 117 + 49145316 ccctgtgccgtgctgggt--actcactt-gggtgtgggattttcccagtgagtctccctgca-caggctgtgggttctgctgcccagggaccttgat-ggccctc--tccaccgccaggtccca i calJac3.chr22 C 0 C 0 s mm10.chr7 3659748 98 + 145441459 CACCATGCAGTCCTGGGTACTTTAGTTGGAAGCATGGGATTTTCTAGTTGGCATTTCCCAAACTTGAC----------------------CTCCAAT-GGCCCC---TTCTCCTTGATTTCCTG i mm10.chr7 C 0 C 0 e canFam3.chr1 19619999 0 - 122678785 C a score=1015057.000000 s hg38.chr19_GL949753v2_alt 129086 293 + 796479 gcactcagcagggcaggggctc-------------agtgccgaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- s panTro4.chr19 59063142 293 + 63644993 gcactcagcagggcaggggctc-------------agtgcggaaacta-ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggaaccaacctac-ctgggtttcagcccag-tccagctgggcgactctaggcaagtcactcgaacctctgtgtctcaattaacttatctgtaaaaatggggggaagaccacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55939847 293 + 60714840 gcactcagcagggcaggggctc-------------agtggggaaacta-gtttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCTGCTTGCA-AACactctggagccaacctac-ctgggtttgagcccag-tctagctgggtgactctaggcaagtcactcgaaactctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705567 292 - 106955855 gcactcagcagggcaggggctc-------------agtggggaaact--ttttttttgaatgGGCTTCTCAAGTTCTAA--------TACTGGGAAATTCCTGCCTCTTGCA-AACactctggagccagccttc-ctgggtttgagcccag-tctagctgggtgactcgaggcaagtcactcgaacctctgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacatgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 59993144 292 + 64156825 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55017742 292 + 59248254 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA--TTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctgtgtgtctcaatttccttatctgtaaaaatggggggaagaagacctacctaatgcagttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgTCATGGA- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47123993 293 + 51301725 GCACCCAGCAGGGCAGGGGCTC-------------AGTGgggaagcta-tttttttttaatgggcttCTCAAGTGTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACACTCTGGAGCCAGCCTAC-CTGGGTTTGAGCCCAG-TCTAGCtgggtgactctgggcaagtcactCGAACCTCTGtgtttcaatttccttatctgtaaaaatggggGGAAGAAGACCTACCTAATGcagttgttatgaagattaaatgagttaataacgTGTAAGTACTTAATGGTGAC----TGCTACATAGTCAGtgtcatgga- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 46831201 293 + 50890351 gcacccagcagggcaggggctC-------------AGTGGGGAAGCTA-TTTTTTTTTAATGGGCTTCTCAAGTTTTAA--------TACTGGGAAATTCCTGCTTCTTGCA-AACactctggagccagcctac-ctgggtttgagcccag-tctagctgggtgactctgggcaagtcactcgaacctctgtgtctcaaattccttatctgtaaaaatggggggaagaagacctacctaatgcggttgttatgaagattaaatgagttaataacgtgtaagtacttaatggtgac----tgctacatagtcagtgtcatgga- i chlSab2.chr6 C 0 I 132 s calJac3.chr22 45408364 286 + 49145316 acaccca-----gcacaCACTC-------------AGTGGGGAAGCTTTTTTTTTTTTAATGGTCTTTCCAAGTTCTAA--------CAATTGGCAATTTATGCTTCTTGCA-AATactctggagccagcctac-cagggtttgagcccagctctagctgggtgacttcgggcaagtcacttggacc--tgtgtcttaatttccttatctgtaaaaatggggggaagaggccct-cctaatgcagctgttaggaagatttaatgagttagtaacaggtaagtacttgatggtgac----tgctgcatagtaagtgtcagga-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3659846 273 + 145441459 GCAAACAGCAGAGCAGGGG----------------------GAA-----GTCTGTTTAGTCAGCCTTCTTGAGTCTCAACCATTAGTTGATTGGAAACTCC-ACTCTCCCTA-AATATCCTGAAGCCAGCTGAt-c----------------acccgttgggtgatcttgggcaagtcaatcaagcctcttccttt--gtccccctatctgtaaaaatgggagtaacagaacccacctcatgcagttgttacaaggattaaatgagttaataacatgtaagta-ttgatggtgcctgcttgctatacagtgagcgtcatgaa- i mm10.chr7 C 0 C 0 s canFam3.chr1 19619999 299 - 122678785 ACACCCAGCAGATCAGGGGCTCCTCGGCAAACACAAACAGGGAAGCTG--TATTCTTTAATGACCTTCCCACATGGTGA--------AAATCAGAACTTCCTACTTGTTgcacaacactctgtggccaggctgtgttgggtttgaattcagctccagctgggtgaccttgggcaagtcgcttggacc----tgcctccatgcccttatgtataaacacgagctgacaa--accccatgtgtgcagttgttacaaggattagatgagttaatgacatgtgagtactctgtggtgcc----cgctctgtagt----aCCATGGGG i canFam3.chr1 C 0 C 0 a score=309739.000000 s hg38.chr19_GL949753v2_alt 129379 128 + 796479 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA s panTro4.chr19 59063437 128 + 63644993 TTTTTTTTTTCAAATTACTTTCAGCTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTAGTACAAGGTCCTTGTCCTCAGAGAACTCA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55940140 128 + 60714840 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTTCCACCAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705860 128 - 106955855 TTTTTTTTTTCAAATTACTTTCAGTTGGTGTGTTCT-ACAGTGATG------------TTTTTTCCCACGAAATAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTCAACCAGGAGAACTCA i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 59993439 126 + 64156825 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55018037 126 + 59248254 TTTTTTTTTCCAAATTACTTTCA----GTGTGTTCT-ACAGTGACGT----------TTTTTTTCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47124290 125 + 51301725 tttttttttccaaattacttTCA----GTGTGTTCT-ACAGTGACG-----------tttttttCCCACCAAATAC--TTCCCTG-----AAGCCGAGCCCCTTCATGGGGATGAAGTATTACAAGGTCCTTGTCCTCAGAGAACTCA i papAnu2.chr19 I 4 C 0 s calJac3.chr22 45408650 127 + 49145316 atttttTTTTCAAATTACTTACAGTTGGTGTGTTCT-ACAGTGATT-----------TTTTTTCCCCACCAAAGAC--TTCCCTG-----ATGCCGAGCCCCTTCATGGGGATGAA-TATTGCAAGGTCC-TGTCCTCAGAGAACTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3660119 120 + 145441459 ----ttttt----attGCTTTCAGTTGGTGTGTTTTAACAGTGGCTTTCCCCATGCACATTTTCCTTACCATACACATTTTCCAGGTACCAAGCTGGGCCTCATCA--------------------ATCCCCATTCTCACAGAAATCT i mm10.chr7 C 0 C 0 s canFam3.chr1 19620298 108 - 122678785 GTGTTGGCTTCTGATAACTTCTAATTGTTGTGTTCC-ACAATG---------------GTTTTTTCTACCCAATAT--TTGCCTG-----ATGCCAAGTTC-----------TGAA------CAAGGCCTCTATCCTCAGAGAACTCG i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46831494 132 + 50890351 I a score=5135684.000000 s hg38.chr19_GL949753v2_alt 129507 1312 + 796479 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCATTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGATGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACT--CACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgaggatgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAGTGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCCGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGACCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGTGGGGAGAGGAGTGAGGTCAGAAAG s panTro4.chr19 59063565 1316 + 63644993 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCACTTAAGACATTCGTTT----AGAACCTAGGTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGGCCCGAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagactgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGTTCTGGCAGCTGGCTTCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCGTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55940268 1316 + 60714840 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACCACAGACTTCCTGTCCTTTCCTGGTTTGACCCGAAACCATCCTCCAACTTAGTACATTTCAGGGCATCCAGTCATTCAGAAATTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActgtgagactgttccattctctagaacaagggtgacagtacccgctgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGGCTCCGGTGGaacctctctgcggccccctccgtttcctcctcgctgaagt-ggcgtgataa-catttcctacccaagaagaacctcgtgagggtgga---tgagagtgtgcgcgtgcagggcagctggcccggtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAAGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGTAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCGTCTTCTTCCGGCTGACCCTCCTGTAGTGTCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCGGCTGCTTCCCTCTGCAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102705988 1311 - 106955855 GTCCCCTCTCCT--G-GTTCTCCCAGGTTGCCATCTTTG-AAGCATTTAAGACATTCATTT----AGAACCTAGCTCCTCTCCCATTG--TGTCCTCAGACGTTAACTACAGACTTCCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGGCATCCAGTCATTCAGAAGTTCCCACACCACTTCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGAtt-----tttgagactgttccattctctagaacaagggtgacagtacccgctgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGGAAA--CGAAGGCTGTGCACTCACAC------CTGGGGCTGGGGCCCCGCTCTGGCAGCTGACTTCGGTGGaatctctctgcggccccctccgtttcctccttgctgaagt-ggcatgataa-catttcctacccaagaagaaccttgtgagggtgga---tgagagtgtgtgcgtgcagggcagttggcccagtgcctgacacatccacagccctaagaattgtCCCC-TTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTA-CCCCCTCAGGAG---TCAATGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAATTGGGAGTTGTACCGCCGCCGCCGGTCATCTGTCTCTTCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCCGCCCGAGCCCTCTCACCTGCTTCCCTCCGCAGCCGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59993565 1307 + 64156825 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggc---ataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcatgcagggcagttggcccggcgcctgacacacCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGCT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCAGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55018163 1309 + 59248254 GTTCCCTCTCCT--A-GTTTTCCCAGGTTGCCATCTTTG-ATGCATTTAAAACATTCATTC----AGGACCTAGCTCCTCTCCCACTG--TGTTCTCAGACATTAACTACAGACTTCCTGTCCTTTCCTGGTTTGCCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCGCACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgaccgtacccactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggctatgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCATGCCTGGTGCTGGTGCTGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcatgataa-catttcctacccaagaagaaccctgtgagggtgca----gtgagtgtgcgcgtgcagggcagctggcccggcgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGGCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGCGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCA-GGGGCA-CCCCCTCTCCCAGGAAGCAGGGA-GGGGCCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTG-CCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAG----CTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCTGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47124415 1316 + 51301725 GTCCCCTCTCCT--A-GTTCTCCCAGGTTGCCATCTTTG-ATGCATTTAAGACATTCATTC----AGAATCTAGCTCCTCTCCCACTG--TGTCCTCAGACATTAACTACAGACTTcctgtcctttcctggtttggcCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGTCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGACTCTGAGCCTGTTCCATTCTCTAGAACAAGGGTGACAGTACCCACTGCCTCGAGGtctttgtgaagattaaatg---ctA-----------------GGCTGTGCATCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCGCAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCctggtgctggggctggggccccGCTCTGGCAGCTGGCTTCGGTGGAAC--CTCTGCGGCCCCCTCCGTTTCCTCCTCGCTGAAGT-GGCATGATAA-CATTTCCTACCCAAGAAGAACCTTGTGAGGGTGCA----GTGAGTGTGGGCGTGCAGGGCAGTTGGCCCGGTGCCTGACACACCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCACCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGcccctccctctacc------caccccctt----ccccccgcatgctgatccccctgcccaggtgagggccctgccctgGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCccaggaagcaggga-ggggcCGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGgctg-cccctcctcccctccccagtgAGGGACATTTTTTGGTAAAcctattttcattttggaaaatatttatgaataaatagtTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGAGCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46831626 1316 + 50890351 GTCCCCCCCCCT--G-GTCCTCCCGGGTGGCCACCTTGG-AAGCA-TTAAGGAAATCATTC----CGGACCCAGGTTCCTTCCCCATG--GGGCCTCAGGCCATAAATTAAGGCTTTCTGTCCTTTCCTGGTTTGGCCCAAAACCATCCTCCAAGTTAGTACATTTCAGGCCATCCAGCCATTCAGAAATTCCCACACCACTGCCGTCACCAATAAA--A----TGTCCCTGCAGAGTGCTTGGATTTAGActctgagcctgttccattctctagaacaagggtgacagtacccactgcctcaaggtctttgtgaagattaaatg---cta-----------------ggctgtgcatCCTGTACTCACACGTGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAAAA--CGAAGGCTGTGCACTCACGCCTGGTGCTGGGGCGGGGGCCCCGCTCTGGCAGCTGGCTTCGGTGGaac--ctctgcggccccctccgtttcctcctcgctgaagt-ggcataataa-catttcctacccaagaagaaccttgtgagggtgga----gtgagtgtgcgcgtgcagggcagttggcccggtgcctgacacaCCTACAGCCCTAAGAACTGTCCCC-TTTGTCTGTCGGTCCGGCCCAGATCCCAGACCACCTCCTCGTCCACTCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGCGACCTCCAGTGACACCGGCCCCTCCCTCTACC------CACCCCCTT-----CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGGAGGGAGGCCCCAGGCCACGGGGCATCCCTCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGGTT-----TTCCTCTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCACCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTACATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAATGAGCAAAGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCTCCGGTCATCTGTC---TCTTCTTCCGGCTGACCCTCCTGTAGTGCCCGGCCTTGGACCCGGGCCAGCAGGGCCTCTGCCCGAGCCCTCTCAGCTGCTTCCCTCCGAAGACGTCCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCGGGGAGAGGAGTGAGGTCAGAAAG i chlSab2.chr6 I 132 C 0 s calJac3.chr22 45408777 1296 + 49145316 GTCCTCTCTCCT--A-GTTCTCCCAGGCTGCCATTCTTGAAAGCATTTCAGACGTTCATTCATTGAGAAGCTAGCTCCTCTCCCATCG--TGCCCTCAGACATTAACTACTAACCTTCTATCC-TTCTTGGTTTGGCCCAGAACCATCCTCCAAGTTAGCACATTTCAGGGCATCCAGTCACTC--AAATTCCCACACCTCTACCACCGCC-ATAAA--A----TGTCCCTGCAGAATGCTTAGATTTAGGc--tgagcctctcccattctttagaacaagggtgacagtactcactgcctcgaggtctttgtgaagattaaatg---cta-----------------ggccgtgcatCCTGTACTTGCACGAGAGAGGTGCTCAAAAGCCACAGCCCTCGAGAATA--CGAAGGCCTTGTACTCACAC------CTGGAGCTGGGCCC-------------------CGGTGGaacctctctgcagttccctccgtttcctccttgatgaagcgggcatgataa-tgtttccaacccaagaagaaccttgtgagggtgga----atgagtgcgcgtgtgcagggcagctggcccagtgcctggcacatccgcagccctaagaactgtCCCCTTTTGTCTGTTGGTCCGGCCCAGATCCCAGACCACCTCTTCGTCCACTCACTGACCGCCTTCTCCCCTGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCTCCTTCTACC------TACCCCCT------CCCCCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGCAGGGAGGCCCCAGGCCACGGGGCATCCCCCTCTCCCAGGAAGCAGGGAGGGGGCTGGGAGG-T-----TTCCTTTCAGCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCAGCGGCCTCTCCTGTACCCCCCTCAGGAG---TCAGTGAGCAAGGTGAGGGTCCTGCTGGCGGGGGCGCCGGGCCAGCTGGGGGTTGAACTGGGAGTTGTACCGCCGCCGGCGGTCATCTGTCTCTTCCTCTTCTGTCTTACCCTCCTTTGGTGCCCGGCCTTGGACCTGGGCCAGCAAGGCCTCCGCTCGAGCCCTCTCAGCCGCCTCCCTCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGAGGCCTGCAGGGAGAGGACTGAGGTCAGAAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3660239 1149 + 145441459 GTTCTGTCCTCT--ATATTCTTCCAGACCAC----TTTG-AAGCATTTCAGACAT----------TTGACCTAGCTGCTTTCTTGGTGTATGCGCTCCAACCTTGACATCAGTCTTCCTATCCTGCCCTGCTTTGGTCCTTGACA------------CGAATATCTTAAGGCATTGAGTCCCTCAGAA--TCTCA----------GTTA-CAGTGAAGTG----TGTATCTCCAGAGTGCT-------AGATGGTACATATGTTGCAT--TGTAGGCCACCTGT--TGGTCCCTACT-CCTCAGTGTC---------ACTTAATAACCTTA-----------------GGCCTTACGT-TTGTAC------------------------CTGCAGCCCATG-----------------------------------TGGGGCAAAGGCCAGGCT------------------------------TGGCCCCC------TTCTTCACTCTTAAGA------------------TCACCAAGGGA----------AGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTT-------CCATGCCCCTGACAACTA--CCT-CTTGTCCATCTGCCTGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCC--CCCTCTACC------CTCTCCCT------CCCTCGCATGCTGATCCCCCTGCCCAGGTGAGGGCCCTGCCCTGGAAGACTGG-GGGAGGCCCAAGGCCATGGGACA-CCCTCCCCCCCAGGAAGCAGGGAAGGGATAGGGAGGTTTTCTCTTCCTCTCTGCCCTACCCTGGGGGCCTGGGGGCAAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGAGGCCTCTCCTA---TCCCCACAAGAGAGTTCAGTGGGCAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTGGCCTTGCTGGGATACCTGGCCTTGTACCCGGGCCAGCAGGGCCTCTGCTCGAGCTCTCTCGGCTGCTTCCCGCTGAAGACGCTCAGCACGGAGCTTTTCTAGGGAAGGTGGCCTGCAGGGAGGAAAGCAAGAACAGAAAG i mm10.chr7 C 0 I 12 s canFam3.chr1 19620406 1260 - 122678785 GTCCCCTCCCCTCAG-TTCTTTTCAGGT-----TCTTTG-CAGCATCTCAGATACTGATGC----AGACCC--GGCCCTTTCCCCGTG--TCCTCTCTGACATTAA--GCAGACTCCCCTCTCTATCCTGGCTTGGGCCAAAGTAATCCTCCAAGTC----CACGGCAAGGCCTCCC-TCCTTCAGAAACACCCACGCCACCACTGTCACCAATAAA--ACATCTATCCCAACAGCGTGCCTGGACTTAGACTC--AGCCTATTCCATTCTCTAGGATG-GGGTAACAG---------CCTCGGGGT-TGTGTGAAGGTC-AATG---CTAGCAGCACACAGCTCGAGGGCTGAGCACCAGCTCCT------------GTGCTCAAGCGCCGCAGCCCTCGGGAGAAGTCAGATGCTGTGTAAATGTGC------GGGGGACTGAGGCCCCAT-------GCTGGCCTTGGTG------CGCCTCTGCCTCCCCGGTTCCTT------TAAAGGGGGCAGGAGAATCTTTTCCTGACCAAAAAGAGCCTGGTGAGGGTGGAAGGAGCTGGCACGTGCATGCAGGCCGCTGGGCCTGGTACCTGGCACGTCCCTGGCCCAGAGATCCGTTTCC-TCTGTCTGTCGGTCCGGCCCAGATTCCTGGCCACCTGCTCGTCCACTCACTGACCACCTTCTCCCCTGGGCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGGCCCTCCCTCTAcccccgcgcgcccccccgcccccccccgcATGCTGACCCCCCTGCCCAGGCTAGGGCCCGGCCCTGGAAGACTGG-GGGAGGCCCCAGGCCTTGGGGCAGCCCTCACCCCCAGGAAGCA---------------------------------GCCCCACCCTGGGGGCCCGGGGGCGAGGGCTGCCCCCTCCTCCCCTCCCCAGTGAGGGACATTTTTTGGTAAACCTATTTTCATTTTGGAAAATATTTATGAATAAATAGTTTTATATGACGGCTGGCAGCTGCGGCCTCTCCTC---TCCCCCCAGGAG---TCAGTGAGC---GCTGGGGTCTTGCTGGTGGGG-CGCCGGGCCCACTGGGGATTGAACTGGGAGTTGTACCGCCTCCGCCGTTCATCTGTC---TCCTCCTCAGGCTGCTCCTCCTGGGGGGTTGTGCTCCGGACTCGTGCCAGCAGGGCCTCTGCCCGAGCCCGTTCTGTTGCTTCCCGCCGAAGACGTTCAGCTCGAAGCTGGTCCAGGGATGGGGGTCTGGGGGGAGAACACTCAGGTCAGAAAG i canFam3.chr1 C 0 C 0 a score=243658.000000 s hg38.chr19_GL949753v2_alt 130819 83 + 796479 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC s panTro4.chr19 59064881 83 + 63644993 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCATCCAGCACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941584 83 + 60714840 CTGGTAGCCCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCCGCTGCGTCCAGCACGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707299 81 - 106955855 CTGGTAGCCCCTAGGAGGCCATT-GCCCAGCCTCTCCCACAGAGGGAGCTG--CCACCT-GAAGCCCCCCTGCATCCAGCATGCC i nomLeu3.chr10 C 0 M 197 s rheMac3.chr19 59994872 83 + 64156825 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019472 83 + 59248254 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCGTCCAGTACGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125731 83 + 51301725 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46832942 83 + 50890351 CTGGTAGCTCCTAGGAGGCCATTCCCCCAACCTCTCCCATAGAGGGAGCTG--CCGCCTGGAAGCCCTGCTGCATCCAGTACGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410073 60 + 49145316 CTGGTAGCCCCTAGGAGGCCGTTCCCCCAACCTCTCCC--AGAGGGAGCTG--CCACCAGGAAC--------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621666 76 - 122678785 CTTATAGCCCCTAGAGG-------TCCCACTTTCCCCCA-AGAAGGAGCTGCCCCACCTGGAACCCCGTCCACCTCTA-CCTGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I a score=178724.000000 s hg38.chr19_GL949753v2_alt 130902 92 + 796479 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGCAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT s panTro4.chr19 59064964 91 + 63644993 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCATGTCTCTGGCCTTCCCTTCTGT-GGCTTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941667 92 + 60714840 CCAGCCTCAGCTCCTTAGGCCTGCTGG-AAGAAGCC-ACTTGGTGCTGGGACGCCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGGCTTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59994955 91 + 64156825 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCTTTCCCTTCTGTGGACTTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019555 91 + 59248254 CCAGCCTCAGCT-CTCAGGTCTTCTAC-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125814 91 + 51301725 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833025 91 + 50890351 CCAGCCTCAGCT-CTCAGGCCTTCTGG-AAGAAGCC-GCTTGGTGCTGGGACACCATGGGCACGTCTCTGGCCTTCCCTTCTGTGGACTTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410133 80 + 49145316 CCAGTCTTGGCTCTTAGGGCCTGCTGG-AAGAAGCC-GCCGGGGGCTGGGACGCCATGGGCG------------TCCCTCCTGTGGGCTTCAGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19621742 71 - 122678785 CTGGTCTGAG------AGGTTTGTGGGTAGGAAGCTGGCCTCATGCTGTG----CAAGGACCCAGGACT-GCCATCACTGCC------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3661388 12 + 145441459 I e nomLeu3.chr10 102707380 197 - 106955855 M a score=146355.000000 s hg38.chr19_GL949753v2_alt 130994 56 + 796479 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTTAGCAG s panTro4.chr19 59065055 56 + 63644993 CCTCCCCAGTCTTTA----------AAATCTGATGTTTCTCCAGGTCAAGAA--AGCACACTTAGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941759 56 + 60714840 CCTCCCCAGTCTTTA----------AAATCTGATGCTTCTCCAGGTCAAGAA--AGCACACTGAGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 59995046 56 + 64156825 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55019646 56 + 59248254 CCTCCCCAGTCTTTA----------AGATCTGATGCTCCTCCAGGTCAAGAA--AGCACAAtaagcag i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47125905 56 + 51301725 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGGTCAAGAA--AGCACAATGAGCAG i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 46833116 56 + 50890351 CCTCCCCAGTCTTTA----------AAATCTGATGCTCCTCCAGATCAAGAA--AGCACAAtgagcag i chlSab2.chr6 C 0 I 10 s calJac3.chr22 45410213 56 + 49145316 CCTCCCCAGTCTTTA----------AAATCTGATGGTCCTCCAGACCAAGAA--AGCACATGGGGCAG i calJac3.chr22 C 0 I 9 s mm10.chr7 3661400 66 + 145441459 CCTACCTGGTCCTTGGACTCACTGCAAGGCCTATGTCCCTTCAGGTCAAGAA--TGCCCACTGAGCAG i mm10.chr7 I 12 I 1 s canFam3.chr1 19621813 39 - 122678785 ----------------------------CCTGATGCCCCTCCAAATCATGAGCTATGATGATGAGCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102707380 197 - 106955855 M a score=96993.000000 s hg38.chr19_GL949753v2_alt 131050 27 + 796479 CCCCCTGGCCCTCAGTTTCCCTTTCTA s panTro4.chr19 59065111 27 + 63644993 CCCCCTGGCCCTCAGTTTCCCTTTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941815 27 + 60714840 CCCCCTGGCCCTCAGTTTTCCTTTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707578 27 - 106955855 CTCTCTGGGCCTCACTTTCCCTTTCTA i nomLeu3.chr10 M 197 C 0 s rheMac3.chr19 59995112 27 + 64156825 ctctctgggcctcagtttccctttcta i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55019712 27 + 59248254 ctctctgggcctcagtttccctttcta i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47125971 27 + 51301725 ctctctgggcctcagtttccctttcta i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 46833182 27 + 50890351 ctctctgggcctcagtttccctttcta i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45410278 27 + 49145316 CTCCCTGGGCCTCAGCTTCCCGTTCTG i calJac3.chr22 I 9 C 0 s mm10.chr7 3661467 27 + 145441459 ATCCTGGGCCCCCTGTATCATTTTCTA i mm10.chr7 I 1 I 1266 s canFam3.chr1 19621852 27 - 122678785 CAGCCAGGACCTCAGTTTCTCCTTCTG i canFam3.chr1 C 0 C 0 a score=396349.000000 s hg38.chr19_GL949753v2_alt 131077 169 + 796479 GAGGA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGCCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggaccccaagagcttttgtttaaatgggt s panTro4.chr19 59065138 169 + 63644993 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGACAGAAGGCTGC-TTTTACTCTC-TAACCcagcagctctcaaactctttggtctcaggacccc----tttatactcttcaaaaccaaggaccccaagagcttttgtttaaatgggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55941842 169 + 60714840 GAAAA-AAGAAGACTACAGGC-AGTATACCCCCTCTAGACCAGGGGTGCAGCATCCTGGAGATATAAGCCTGC-TTTTACTCTC-TAACCcagcacctctcaaactctttggtctcaggacccc----tttatactcttaaaaaccaaggacctcaagagcttttgtttaaatgggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707605 169 - 106955855 GAGAA-AAGAAGACTACAGGC-AGTGTACCCCCTCTAGACCAGGGATACAGCATCCTGGAGATAGAAGCCTGC-TTTTACTGTC-TAACCcagcggctctcaaactctttggtctcaggacccc----tttatactcttaaaatccaaggaccccaagagcttttgtttcaatgggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995139 157 + 64156825 gagaa----aagagTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019739 157 + 59248254 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTA--------TGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47125998 160 + 51301725 gAG------AAGAGTACAGGC-AGTGTACCCCCTCTAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGCTTTTTACTGTCTTAACCCAGCAGCTCTCAAAC----TGGTCTCAGGATGCC----TTTATACTCTTTAAAACTGAGGACCCTAAGAGCTTTTGTTTAAATAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833209 165 + 50890351 gagaa----aagagtacaggc-agtgtaccccctctAGACCAGGGGTACAGCATCCTGGAGAC--AAGCCTGC-TTTTACTGTCTTAACCcagcagctctcaaactgtttggtctcaggacccc----tttatactctttaaaactgaggaccctaagagcttttgtttaaatagat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45410305 153 + 49145316 GAGAAAAAAAAGATTACAGGC-GGC-------------------GGGACAGTATCCTGGGGATAGAAGCCTGC-TCTTACTCTC-TAACCcagtggttctcaaactctttggtcccaggacacacgcgtttatactcttaaaaa--gggggtcccaagagcgtttgtttcaatgggt i calJac3.chr22 C 0 M 842 s canFam3.chr1 19621879 107 - 122678785 --------------TAGGAGCTAGGAGACCTGCTC--------AGGTTTGTCCTCCTTGGGACACAAACCTGC-TCTGAC-----TGACCCCGTGGTTCTCAAAC-----------------------T-------------------AGACCCCAGAAAGCTTTGTGTCAGTGGGT i canFam3.chr1 C 0 I 4 e mm10.chr7 3661494 1266 + 145441459 I a score=814687.000000 s hg38.chr19_GL949753v2_alt 131246 357 + 796479 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattggccatcagagtgagggtgtctccccatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaagtccaccag----tg-tcaggaaaataggcttgacaccacagcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGAGTCCCTGGCTGTCCTGACCAGAGACGCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG s panTro4.chr19 59065307 361 + 63644993 t----ctcttaatatgctgcaaatcattagtgaaaactaagaaagtttGGacacaagcatc--tgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggaaacctgcactacatgcctgagaacacgagtggaaaaggccaaaagtgtttg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctagggctccctggaccacatgctgagaaccactTCTCCACCTAGCCAGCCCTTCACGGCGTCCCTGGCTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAGGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942011 357 + 60714840 t----ctgttaatatgctgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatc--taccattagccatcagagtgagggtgtcttctcatcacacagcctc--tggaaacctgcactacgtgcctgagaacgcgagtggaaaaggccaacag----tg-ttaggaaaataggcttgacaccacggcaccccgggaaaggg-tgtcaggacccctaggcctccctggaccacatgctgagaaccactTCTCCACCCAGCCAGCCCTTCACGGAGTCCCTGGCTGGCCTGACCAGAGACCCTGCAGTGTCCATGCTGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCCGAGGTGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102707774 348 - 106955855 t----ctgttaatatgttgcaaatcag-agtgaaaactgagaaagtttGGacacaagcgtctgtgccattagccatcagagcgagggtgtcttctcatcacacagcctc--tggacacctgcactgcgtgcctgagaacacgcgtggaaaaggccaacag----tg-ttaggaaaataggcttgacacctcggcaccccgggaaaaggctgtcaggacccctagggctccctggaccacatgctgaga-----------accCAGCCAGCCCTTCAGGGAGTCCCTGGCCGTCCTGACCAGAGACCCTGCAGTGCCCATGCCGGGCTGCTGCCAAGCCCTGAAGGTCTGGGCCCTGGTCTGCTGAGGCGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995296 359 + 64156825 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccgtcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55019896 359 + 59248254 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaatgcgagtgaaaaaggccaacag----tg-tcaggaaaataggcttgataccacggcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAGCCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126158 359 + 51301725 TCTACCTGTTAATATACTGCAAATCAGAAGTGAAAACTAAGAAAGTTTGGACACAAGCATCTGTGCCATCAGCCATCAGAACGAGGGTGTCTTCTCATCACACAGCCTC--TGGAAACCTGCACTATGTGCCTGAGAATGCGAGTGAAAAAGGCCAACAG----TG-TTAGGAAAATAGGCTTGATGCCACAGCACCCCGGGAAAGGG-TGGCAGGACCCCTGGGGCTTCCTGGACCACATGTTGAGAACCACTTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGCCCATGCTGGGCTGCTGCCAAACCCTGAAAGTCTGGGCCCTGGTCTGCCGAGG-AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833374 359 + 50890351 tctacctgttaatatactgcaaatcagaagtgaaaactaagaaagtttGGacacaagcatctgtgccatcagccatcagaacgagggtgtcttctcatcacacagcctc--tggaaacctgcactatgtgcctgagaacgcgagtgaaaaaggccaacag----tg-ttaggaaaataggcttgataccacagcaccccgggaaaggg-tggcaggacccctggggcttcctggaccacatgttgagaaccactTC---ACCCAGCCAGCCCTTCACCGAGTCCCTGGTTGTCCTGACCAGAGACCCTGCAGTGGCCATGCTAGGCTACTGCCAAGCCCTGAAAGTCTGGACCCTGGTCTGCCGAGG-AGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19621990 257 - 122678785 ----TCTATTGCTATTTTGCA---TAGAAGCG-------AGAAAACCTTGAAACAAGGTTA--CGTCCCCAGTCACCACA------GTGTCTCTTCA-CGCCCTGTCTCTTTAGAAGC---CACTGGACAATCAAGGCT--GAGTG--AAGGGTCACAGG----GGCTCAGGAAAACCAGCTTGCCTCTGCAG-ACCCCCTGCTAGGG-CGTTGGAGCCCCAAAG----------CCACACGTGGCGAGCCGCCTCCCCAGGCCCCCAGCCCCTCAC---------------CCTGA------------CAGCACCAATGCA-----GCTGCCCA------------------------------------ i canFam3.chr1 I 4 C 0 e mm10.chr7 3661494 1266 + 145441459 I e calJac3.chr22 45410458 842 + 49145316 M a score=999202.000000 s hg38.chr19_GL949753v2_alt 131603 286 + 796479 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGACTGCCTTCATCACCGCCGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG s panTro4.chr19 59065668 286 + 63644993 GT----CTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCTGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCTGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCACTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942368 290 + 60714840 GTCTTCCTTCTTACTTCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCAATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGAGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAGGATGCCCAGAGCCTTCTCTTGTCTCTCCTGAGGGGGCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708122 290 - 106955855 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTC---CTTTTCCTTTCTGCTGCGATTGCCTTCATCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGCAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCGGGCGGGGGGC---CCCCTCGCCCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTATGTCAAGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995655 290 + 64156825 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAACTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020255 290 + 59248254 GTCTTCCTTCTTACTCCTTGGGTCGCAGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGAGGGGGCC---CCCCTCGCTCTGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126517 287 + 51301725 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGacccctc---cttttcctttctgctgcaATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCCGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46833733 290 + 50890351 GTCTTCCTTCTTACTCCTTGGGTCGCTGCTTCTCAGACCCCTCCTTCTTTTCCTTTCTGCTGCAATTGCCT---TCACCGCTGTGCCGTCTCTTCTTCCCCAGATGCTTCTGCATCTCCCGAAGAGGGTCCAGACGGCTCTTGATCTTCTCATCTGGGGCTGGGCCAGGCGGGGGGC---CCCCTCGCTCCGGGGGTAGCTGGTACCAAGGGGGTTGAGTCTGTGCCTCTGCTGCACTCTGGCCCAGGTACGTCAGGATGCCCAGAGCTTTCTCTTGCCTCTCCTGAGGGGGCCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3662760 277 + 145441459 GT----ATTCTTACTCTCGGGGTCGTTGTTTCTGAGG---------CCGTTCCTCTCTGGAAGGACGGCTT---TCACTGCTGTGC---CTTTTCTTTGCCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTGATCTTCTCATCTGGGCTTGGGCCTGGAGGGCAGCAGTCCTTTTGCCCTGGGGGGAGCTGGTACCAAGGAGGCTGAGTTTGGGCCTCTGCTGCACTCTGGCCCAAGTAAGTCAGGATACCTAGTGCTTTCTCTTGTCTCTCCTGCAGAGGCAAG i mm10.chr7 I 1266 C 0 s canFam3.chr1 19622247 285 - 122678785 -----CTTCCTTACACTTCAGGCCGCTGCTTCTCAGGCTTCTC---CTTCCCCTTCCTGCCATGGCCACCATTGTCCCCACTGTGCCGTCTCTTCCTCCTCAAGTGCTTCTGTATCTCCTGTAGAGGGTCCAGGCGGTTCTTGATCTTTTCATCTGGACCTGGGCTGAGCTGGGGGG---CCCCTTGCCGTGGGGGTAGCTGATACCAAGGCAGCTGAGTCTGGGCTTCTGCTGCACTCTGGCCCAGGTAGGTCAGGATGCCCAGAGCTTTCTCCTGCCTCTCCTGAGGGGGACAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45410458 842 + 49145316 M a score=142995.000000 s hg38.chr19_GL949753v2_alt 131889 46 + 796479 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC s panTro4.chr19 59065954 46 + 63644993 GAAATACAAGAGATGTGATGTAATCTTTCAAGGTGTC--AGGTGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942658 46 + 60714840 GAAATACAAGAGATGTGATATAATCTTTCAAGGTGTC--AGGTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708412 46 - 106955855 GAAATACAAGAGATGGGATATAATCTTTCAAGCTGTC--AGGTGTGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995945 46 + 64156825 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020545 46 + 59248254 GAAATACAAGAGATGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126804 46 + 51301725 GAAATACAAGAGATGGGATATAATCTTCCAAGGTGTT--AGGTGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834023 46 + 50890351 GAAATACAAGAGCTGGGATATAATCTTTCAAGGTGTC--AGGTGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411301 46 + 49145316 GAAATAAAAGAGATGGGATATAATCTTTCAGGGTGTC--AGGTTTATC i calJac3.chr22 M 842 C 0 s mm10.chr7 3663037 46 + 145441459 --AAAACAAAATAGTCTTTTCAGTCCCTCTGGGAGCCCTAGATGTGGC i mm10.chr7 C 0 I 98 s canFam3.chr1 19622532 30 - 122678785 --------AAAGAGGGAA--------CTGAGGATGTC--AGCGATGTC i canFam3.chr1 C 0 C 0 a score=305095.000000 s hg38.chr19_GL949753v2_alt 131935 124 + 796479 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCAAAGCTCC--CCCT-GGGGGGACAGTAGCAGGTACAG s panTro4.chr19 59066000 124 + 63644993 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATCTAAGGCTTGT----------------TATGAACCAGTTGGACCAGGTGCTGGGGATGGAAGACA--AACAGAGGCCAAGCTCC--CCCT-GGGGACACAGTAGCAGGTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942704 127 + 60714840 TCCCTGACACAGG------TATCTAAGCGaacag-gtatctaaggcttgt----------------tatgaaccagttgtaccaggtgctggggatggaagacaccaacagaggccaagctcc--ctCTGGGGGGGACAGTAGCAGGTACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708458 126 - 106955855 TCCCTGACACAGG------TATCTAAGCGAACAG-GTATGTAAGGCTTAT----------------TATGAACCAGTTGTACCAGGTGCTGGGGTTGGAAGACACCAACAGAGGCCAAGCTCC--CCCT-CCGGGGACAGTAGCAGGTACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59995991 121 + 64156825 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020591 121 + 59248254 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGAGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAG-----G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126850 126 + 51301725 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGCTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGACCGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834069 126 + 50890351 TCCCTGACATAGG------AATCTAAGCAAACAG-GTACCTAAGGTTTGT----------------CATGAACCAGTTGTACCAGGTGCTGGGGATGGAAGACACCAACAGAGGCCAAGTTCC--CCCT-GGGGGGACAGTGGCAGGTACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411347 112 + 49145316 TCCCTGAC----------------------ACAG-GTATCTAAGGCCTAT----------------GGTGAAGCAGCTGTGCCAGGTGCTGGGGAGGGAAGAGACCAGCAGAGGCCAAGCTCCTGCCCT-GGGGTGACGATAGCAGGGACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622562 131 - 122678785 TCC---ACTCAGGGAGCCCTACCTGTGACAACAGAATCCCCCAGGCTCCTGGACAGGTAGAAGCAGCATGAGTCAACTCAGCCATTTTT------CCAAGGACA--------GGTGGGCCTCC--TGCA-CTGGGCAGAGTGTCAATTCAA- i canFam3.chr1 C 0 C 0 e mm10.chr7 3663083 98 + 145441459 I a score=351898.000000 s hg38.chr19_GL949753v2_alt 132059 114 + 796479 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT s panTro4.chr19 59066124 114 + 63644993 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942831 114 + 60714840 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGGAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGAAGCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708584 111 - 106955855 TAAC----AGCA-GGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGC--AGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGGGAAGCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996112 114 + 64156825 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020712 114 + 59248254 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47126976 114 + 51301725 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTGAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834195 111 + 50890351 TAAC----AGCAGGGGAAGGAGGGGAC-AAGTGGAGCCACTTAAGT----GTTCAGAGGCAGGCATCTTTGCAGAGAGAC-TTGAAGAGAAGCCTGAAGGGAT-CAAGCAAAGC-AGAGGAGC--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411459 96 + 49145316 TCACAGAAAGCAGAGGAAGGAGGGGATGGGGTGGAGCTGCCTGAAT----GTTCAGAGGCAGGCATCTTTGC-------------------------AGGGAG-CAAGCAAAGCAAGAGGACCCGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3663181 114 + 145441459 TATC----TGCAGGAGGAGGAAGAAAG-AGAGGCTGCGGCCTGTGCAGTAGTGAAGATGGGAGAAGCTTTGGGAACAG-T-TTAAGGAAAAACCTGCAGAA----AAGCAAAGT-GGAGGAGTGAT i mm10.chr7 I 98 I 254 s canFam3.chr1 19622693 119 - 122678785 TAACAAAAAACACAAGGGGGAAGGACA-GGGTGCAGCTGCTTTAGG----GTTCAGAGGCA-GCATCTTTGGGGAGATACTTTAAAGATGAACCTGAAAGCCCGCCAGCAAGGC-AAAGGAGTGAG i canFam3.chr1 C 0 C 0 a score=105273.000000 s hg38.chr19_GL949753v2_alt 132173 32 + 796479 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT s panTro4.chr19 59066238 32 + 63644993 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942945 32 + 60714840 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708695 32 - 106955855 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996226 32 + 64156825 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020826 32 + 59248254 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127090 32 + 51301725 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834306 28 + 50890351 ----GGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411555 32 + 49145316 GGGTGGGGTCA--GCAAGTCCAGA-----------------GACAGCAGGT i calJac3.chr22 C 0 I 12 s canFam3.chr1 19622812 49 - 122678785 --GCGAGACAAAGGCAAGTTCAGAGTTTGGTGGGAACCCCTGAAAGTGGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=32452.000000 s hg38.chr19_GL949753v2_alt 132205 11 + 796479 AAATGACAAGA s panTro4.chr19 59066270 11 + 63644993 AAATGACAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942977 11 + 60714840 GAGTGACAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708727 11 - 106955855 GAGTGACAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996258 11 + 64156825 GAGTGACAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020858 11 + 59248254 GAGTGACAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127122 11 + 51301725 GAGTGACAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834334 11 + 50890351 GAGTGACAAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19622861 11 - 122678785 AAGTGACAGGA i canFam3.chr1 C 0 I 90 e mm10.chr7 3663295 254 + 145441459 I e calJac3.chr22 45411587 12 + 49145316 I a score=297474.000000 s hg38.chr19_GL949753v2_alt 132216 126 + 796479 GCTGATGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcaatcctcctacctcagcccc s panTro4.chr19 59066281 129 + 63644993 GCTGATGTACCtctttttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcctaggttcaagcaatcctcctgcctcagcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55942988 127 + 60714840 GCTGACGTACCGC--tttttttctgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcggctcactgcaacctctgcttcccaggttcaagcagacctcctgcctcagcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708738 126 - 106955855 GCTGAGGTACCtc---ttttttttgagatggagtctcgctctgttgcccagactcgagtgcagtggcacgatctcagctcactgcaacctctgcttcccaggttcaagcaatcctcctgcctcagcccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996269 127 + 64156825 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020869 127 + 59248254 GCTCATGTACCTG--tttttttttgagatgcagtctcgctctgttgcccaggctcgagtgtagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127133 126 + 51301725 GCTCATGTacctg---ttttttttgagatgcagtctcgctctgttgcccaggctctagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46834345 126 + 50890351 GCTCATGTACCTG---ttttttttgagatgcagtctctctctgttgcccaggcttgagtgcagtggcaccatctcggctcactgcaacctctgcctcccaggttcaagcaatcctcctgcctcagcccc i chlSab2.chr6 C 0 I 4359 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I a score=295792.000000 s hg38.chr19_GL949753v2_alt 132342 188 + 796479 ccgagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctcccaaagtgctgggattacaggcgtgagccaccatgcacagccACTGATGTAC s panTro4.chr19 59066410 188 + 63644993 cctagtagctgggattacaggcacacaccaccatgcccagctaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccacgttggcctccccaagtgctgggattacaggcgtgagccaccatgcacggccACTGATGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943115 186 + 60714840 cctagtagctgggtttacaggcacacaccactatgcccagctaatttttgta--tttagtagagacggggttttgccgtgtttggccaggctggtcttgaacttctgacctcaggtgatccacccatcttggcctcccaaagtgctgggattacaggcgtgagccaccatgcatggccACTGATGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102708864 188 - 106955855 cctagtagctgggattacaggcacacaccaccatgcacagctaatttttgtatttttagtagagagcgggttttgccatgtttggccaggctggtcttgaacttctgacctcaggtgatccacccaccttgacctcccaaagtgctgggattacaggcatgagccaccatgcacggccACTGATGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996396 147 + 64156825 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttatatttttagtacagacggggttttgccatgtttggccaggctggtcttg---------------------------------------aaTGTGCTGGAATTACAGGTGTGAGCCACCATGCATGACCA--GACATAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55020996 186 + 59248254 cctagtagctgggattacaggcacgcaccaccatgcccggctaatttttgtatttttagtacagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccatgtacgaccA--GACATAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127259 185 + 51301725 cc-agtagctgggattacaggcacgcaccaccatgcccggttaatttttgtatttttagtagagacggggttttgccatgtttggccaggctggtcttgaactcctgacctcaggtgatccatccaccttggcctcccaatgtgctgggattacaggtgtgagccaccgtgcacgacCA--GACATAc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e calJac3.chr22 45411587 12 + 49145316 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=561883.000000 s hg38.chr19_GL949753v2_alt 132530 265 + 796479 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcgcaatctcggcttactgcagcttccacctcctggg-tcaagcgattctcctgcttcagcttcc-------ctgggattacaggcgcgcaccaccatgcccggctaattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca s panTro4.chr19 59066598 271 + 63644993 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCAATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtgcagtggcacaatctcggcttactgcagcttccacctcctggg-tcaagtgattctcctgcttcagcctcccgagtagctgggattacaggcgcgcaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943301 272 + 60714840 CTTTTACACTTGATCTTAGCCAAAAAGCAAGAG------GCGATTGATTCACt------------t----tttgtttgattgttttgagatggggtctcgctc-tgtcacccaggctggagtacagtggcgcagtctcggcttactgcaacttccacctcctggg-tcaagcgattctcctgcttcagcctcctgagtagctgggattacaggcgcacaccaccacgcccggctaa-tttttttgtatttt---tagagataccatgttgaccaaggctggtcttgaactcctgacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709052 275 - 106955855 CTTTTACACTTGATCTTAGCCAAAAAGCAGGAG------GCGATTGATTCACt------------ttttgtttgtttgtttgttttgagatggggtctcgctc-tgtcatccaggctggagtgcagtggcgcaatctcggctcactgcaacttccacctcccagg-tcaagtgattctcctgcttcagcctcccaagtagctgggattacaggcacgcaccaccatgcccagctaa-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996543 279 + 64156825 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCC--ttttttttttt----ttctctttttttttttgagatggggtctcgctc-tgtcacctgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021182 282 + 59248254 TTTTTACACTTGATCTTAGCCAAAAGGCAAGAG------GCGAATGATTCGCCttttttttttttt----ttttctttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccagg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggcttattttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127444 278 + 51301725 tttttacacttgatcttagccaaaaggcaaGAGCAAAAAGCGAatgatttgcc---------tttt----ttttttttttttttttgagatggggtctcgctc-tgtcacccgggctggagtgcagtggcgcaatctcagctcactgcaacttccacctcccggg-tcaagcgattctcctgcttcagcctcc-aagtagct-ggattacaggcgtgcaccaccacacttggctta-tttttttgtatttt---tagagataccatgttgacc-aggctggtcttgaactcctgacctca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45411599 268 + 49145316 CTTTTACACTCGATCTTAGCCAAAAGGCAAGAA------GTGAT--GTTCACt----------ttt----tttttttttttttcctgagattgagtctcactcttgccacccaggctagagtgctgtggcacgatctcagctcactgcagcttccacctcctgggttcaagcgattctcctgcctcagcctct---------gggactaaaggtgcatgccaccatgctcagctaactttttttgtatttttagtagagataccatgttgacc-aggctggtcttgaactcctgaccgcg i calJac3.chr22 I 12 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I e chlSab2.chr6 46834471 4359 + 50890351 I a score=222547.000000 s hg38.chr19_GL949753v2_alt 132795 74 + 796479 ggtgatccacccgcctcagcctcccaaggtggtgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT s panTro4.chr19 59066869 74 + 63644993 ggtgatccacccgcctcagcctcccaaggtggtgggattccaggcgtgagccacagcC-GGCTGATTTAAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943573 74 + 60714840 ggtgatccaccggcctcagcctcccaaggtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709327 74 - 106955855 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccacagcC-GGCTGATTTAAATTTT i nomLeu3.chr10 C 0 I 270 s rheMac3.chr19 59996822 74 + 64156825 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021464 74 + 59248254 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127722 74 + 51301725 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccatagct-ggctgatttacatttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838830 74 + 50890351 ggtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcT-GGCTGATTTACATTTT i chlSab2.chr6 I 4359 C 0 s calJac3.chr22 45411867 75 + 49145316 ggtgatctgcccacctcagtttcccaaaatgctgggattacaggcatgagccaccacCAAGCTGATTTAGATTTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=218485.000000 s hg38.chr19_GL949753v2_alt 132869 73 + 796479 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA s panTro4.chr19 59066943 73 + 63644993 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943647 73 + 60714840 TAAAAGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCGGTTTGCCCAGCAGCTGGGGACCTCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709671 73 - 106955855 taaaaGCCCATC-AGGTTTGAGACTCCTCCAGTTTGGAGAACTGAGCTGTTTGCCCAGCAGCTGGGGACCTCTA i nomLeu3.chr10 I 270 C 0 s rheMac3.chr19 59996896 74 + 64156825 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021538 74 + 59248254 TAAAAGCCTATCAAGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127796 73 + 51301725 taaaagcccatC-AGGTTTCAGACCCCTCCAGTTTCGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838904 73 + 50890351 TAAAAGCCCATC-AGGTTTCAGACCCCTCCAGTTTTGAGAACTGAGCAGTTTGCCTAGCAGCTGGGGACCTCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45411942 73 + 49145316 TAAAAGCTCATC-AGGTTTGAGACCCCTCCAGTTTGGAGACCTGAGCAGTTCACCTAGCAGCTGGGGATCTCGA i calJac3.chr22 C 0 C 0 e mm10.chr7 3663295 254 + 145441459 I e canFam3.chr1 19622872 90 - 122678785 I a score=99369.000000 s hg38.chr19_GL949753v2_alt 132942 31 + 796479 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG s panTro4.chr19 59067016 31 + 63644993 GCATCTACCTCCAAC-CCCTGTGGGCGCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943720 31 + 60714840 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709744 31 - 106955855 GCATCTACCTCCAAG-CCCTGTGGGCGCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59996970 31 + 64156825 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021612 31 + 59248254 GCATCTACCTTCAAG-CCCTGTGGGTGCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127869 31 + 51301725 GCATCTACCTCCAAG-CCCCGTGGGTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46838977 31 + 50890351 GCATCTACCTCCAAG-CCCTGTGGGTGCCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412015 31 + 49145316 GCATCTACCTCCAAG-CCCTGAGGGCACCCAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19622962 29 - 122678785 GCACCCACTTCCAAGCCCCTGCAGGGAGG--- i canFam3.chr1 I 90 C 0 e mm10.chr7 3663295 254 + 145441459 I a score=8422861.000000 s hg38.chr19_GL949753v2_alt 132973 2501 + 796479 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACCTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATG-AGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTGACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGCGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACGGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGCcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGAAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAGTGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCGCCGCCCTGCCGGCTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCCGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGCGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTGTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg s panTro4.chr19 59067047 2493 + 63644993 ACGGCAATAGCCAACGCTTTTTGAGTGTCATGCCTTGGTATGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCAATGGCTAAAGTGCCCCCTCCCTCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-TGAAAGGGAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAACCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATCA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCTGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCTAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCTAAGGAAATGAAAGTTGGGTGTACACCAAACAGATTTAAAGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGCGCA-CGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCGCCTCTCCTTAAAATGTGTcttcccctcactgaagccatctcacttcgtgcaacagagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtcaggtgcacggcatgtagttagcatac----agtagatgctcaataaatagGATGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggaaaAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCGGGGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACATTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAccgcggcgcctgcgcgctgggccc-cggagcgccgcccggccggcTTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGCTG-CCCCCCTTCTTCTTGTCCCTACTTCGACCGCGGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAGCGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTG--------CTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGACAAGTCTCCTTGCGGAAGAGCGCTCTGCATCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATATATGGAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagatagcaaagctggaagggcttggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGACCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGAAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAACGTCTGGctccttcgaagccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55943751 2491 + 60714840 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGGTATGGCCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCGCAACCAATGGCTAAAGTGCCCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCGACAGGGCCAGAACCTGGGGCTCCTGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATCGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGat--gctggggttata-agaaagggagcactaggcgcctaaaagaggcacctgtcct---agctgggggtgagggtagg---------------cagatgaggcaacgc------ctgggttTCGTAAGCTCC--CTTTCAAATAGTAAACCACGGGACATCAAGGATGTATGGGAGGAGGTCCCAGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGCCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGCTTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACAGTGG---AGGATCAGACTAGCTAAGGAAGTGAAAGTTGGGTGTACACCAAAC--ATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCCCGATGGCGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggagatgacagtgtccctctaa----gaacagtgcttattggggattccgcaagtcaggtgctctgcatgtagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAATGATCCGAATTTCCGTGAACTGTCCAAGGGttcacggattcattaaatg---ttaagcttctcttttgtgctagacactgttctagccacgtgaaatacatcagtgggggaacaactaagacgaGGGCGAAATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGCGCTGGGCCC-CGGAGCTCCGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCGCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACACGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATGCCCCCCCTTCGTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGCCCTTTATCACAGCGAGTGCTAGGCGTTTGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGCCTCCTTGCGGAAGAGCGCTCTGCACCGACAAACATGCCCGTACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGGAAGATCACC-CGAGAGTCAAGGACGT-GGCG-----GCGAGGGGCCCTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCTAGTTCTCCTAG-TTTACAGATGTTGTG----------ACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GGGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAATCCTCTTCCC-CAACCCCTTTCCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATTAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCAAATATCTGGctccttcgaagccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102709775 2499 - 106955855 ATGGCAATAGCCAACGCTTTTTGAGTGTCATGCTTTGATAAGGTCCTAAA---TTCTGTGTGTTCACTCTTGTTTGACCTTGGTCACAACCGATGGCTAAAGTGCGCCCTCCCCCCA------ACTCGATTCATGGCCCCT--CTGATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCTTGTCGCTTTTCTTCCTCGTACTCTTTATTGCTTCTGATCACTCCTTTCCCTTCCTCCAGGAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGCTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGACATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGTAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGAAGCACTAGGCGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGATGATGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTCC--CTTTCAAATAGTAAGCCACGGGTCATCAAGGATGTATGGGAGGAGGTCCCTGGCCTAAACCAAAGAGGTTCCTAACCTCAAATGAGGCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTA----------TGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT-----------------------------------------------CTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACGGTGG---AGGATCAGACTAGCGAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTATGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCTTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCActtaagctatctcacttcgtgcaacggagatgacagtgcccctctaagaacgaacagtgcttattggggattccgcaagtccagtgctctgcatttagttagcatac----agtaggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGGGTTCACGGATTCATTAAATG---TTAAGCTTCTCTTTTGTGCTAGACACTCTTCCAGCCATGTGAAATACATCAGTGGGGGAAAAACTAAGACGAGGGCGAGATCAAGGGAGGTTTCGTGGAAGTGGGCACAAGGTTTGCAGAGCAACGTTCTCGAAAACGGG-------------ATCGGCGCCTGGTCCGGAATTTCACACGGGACACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCCTGCGTGCTGGGCCC-CGGAGCTCCGCCCGGCTGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGTACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGGCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCTTCTTGTTCCTACTTCGACCGCAGATTGGTTCCGAATTAATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACACCCTTCATCACAGCGAATGCTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTGTCACAGATCCGAACCAATCATAAGTTGGCCCGCCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GCCGACATGACCGTCAAGTCTCCTTGCGGAAGAGCGCTCCGCACTGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCTGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTTAGGGACGC-CGCGTCCCTGCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCGGTGGGCCTGGGGTCTG---ATAGTGGGACGT-----------GGGCTGCGGGGGTCACAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGTGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGAGACAGCCCTCTTCCC-CAAC------CCATGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAAGAACGGAAGCCACTCCTGACACGCTCTTCCATTATATCCACACGTCTGGctccttcgaagccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59997001 2477 + 64156825 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTAAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGACTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGGCAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAACCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55021643 2477 + 59248254 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------G-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGAAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCAGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCCCGTGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTTCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGGCTGGC-TGTCCCCCTCTCCTT-AAATGTGCCTTCCCCTCACTGAAGCCATCTCACTCCGTGCAACGGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTCCTGgggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatAAACTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagctgctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTCCTCTTGTCCCTACTTCGACCGCAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCACAGCGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCGCCCC--GATGCTACCATATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTCTG---AAAGTGGGGCGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTCGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTCTCCGTGTTCCCCG--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCCCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47127900 2452 + 51301725 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCGTTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCC--------------------GCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGAtcactcctttcccttcctccagcAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCA--AAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGggttcctaacctcaagtgagaCAATTAAAA-------------------------------CAGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC-----------------------------TCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA-----------------------GAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAAACAGATTTAAGGAGCCATACAGAAAGCccgtgtttgtgtgtatgt--------------------------------------------------------gtctagggGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGCC-TGTCCCCCTCTCCTT-AAATGTGCCTTTCCCTCACTGAAGCCAT----CTCCGTGCAACAGAGATGACAGTGCCCCTCTAAGAACGAACAGTGCCTATTGGGGATTCCGCAAGTCAGGCGCTCTGCATGCAGTTAGCatac----aataggtgctcaataaataggcTGCGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCTCATgtattcattaaatgtttttaa---gcttttttgtGCTAGACAGTGTTCCAGCCATGTGAAATACATCAGTGGGGGGA-GACTAAGACGAAGGCGAGATCAAGGGAGGTTTGGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGTCCCCAACCGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCAGCCCGGCCGGCCTCCGAGCTTACCTCTTGCTGAGCCAGCAGCGCTCTCCGCTCacgctccttctcctcctcccggGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCTCTTTGCACTTCCGATTGGCGAGAGGATG-CCCCCCTTTTTCTTGTCCCTACTTCGACCACAGATTGGTTCCGAATTAGTTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTGAGACGTCCTTT-TCATAGCGAATGTTAGGCGTTCGGCTCATGGTATCCCCTAGCAACCGCCTCTTATCACAGATCTGAACCAATCATAAGTTGGCCCACCCCT-GATGGTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGGGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCggtagccctgcccccaccttcaGGACGCAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCC-----GCGAGGGGCCTTGGAAATCTCCAGATACCAAAGCTGGAAGGGCGTGGAGTCTTCTCCAGTTCTCCTAG-TTTACAGATGTTGTGACCTAGGCTTACAATGGGCCTGGGGTCTG---AAAGTGGGACGT-----------GAGCCGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------CGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCTGACGTTTGAGCTCAGAGATGAGGCGTCCGTAGGAATTAGCCCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGAAAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46839008 2477 + 50890351 ATGG-------CAACACTTCTTAAGTGTCATGCTTTGGTATGGTTCTAAA---TTCTGTGTGTTCATTCTCGTTTGACCTTGATCACAAGCAGTGGCTAAAGTGCCCTCTCCCCCCA------ACTCGATTCATGGCTCCT--CTAATGAA-------GTGGGTGAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTACTCTTTATTGCCTCTGATCACTCCTTTCCCTTCCTCCAGCAGCTCCCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCGCCTCTGCTGCTTCAAGCTCAGGCAGTGAGTTCTGATGTCGGGCTTTCTTTCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTCATAGGCAGGGCATTCAGAACCTAGAGGT------A-ATTCAAGAAC-TGT-----------GAGTCTGGTG------CCCACCACAGAAAATGGCAGTC------------------------------CAGGGT--GCTGGGGTTATA-AGAAAGGGAGCACTAGACGCCTAAAAGAGGCACCTGTCCT---AGCTGGGGGTGAGGGTAGG---------------CAGATGAGGCAACGC------CTGGGTTTTGTAAACTGC--CTTTCAAATCGTAAACCACGGGTCATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CCGCCATA---------------------------------------------------------------------AAGGTAGACCAA--ACTGCATTA-GGCCAGACGATCTGAATTCTAGCCATGGCTCCAAGTCACTACCCCAAGT--------------------------------------------CGACTGCTGAAGCCCT-----------------------GTCCCCCGCC----------------------------TTCAGGACGCGGATTT----------------------------------------CAAACAGCGCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CACCCACTGTGG---AGGATCAGACTAGCTAAGGAACTGAAAGTTGGGTGTACACCAGACAGATTTAAGGAGCCATACAGAAAGCCCGCGTTTGTGTGTATGT--------------------------------------------------------GTCTAGGGGGC-------------------------------------------------------------------------------GGTGCA-GGAAAGGGCTCGCC------CGATGGCGTGGAGCCTGGC-TGTCCCCCTCTCCTT-AAATGTGCcttcccctcactgaagccatctcacttcgtgcaacggcgatgacagtgcccctctaagaaggaacagtgcctattggggattccgcaagtcaggcgctctgcatgtagttagcatac----aataggtgctcaataaatagGCTGTGCAGGCAAACTAAAAAGTGATCCGAATTTCCTTGAACTGTCCAAGCGCtcatgtattcattaaatgtttttaagcttctcttttgtgctagacactgttccagccatgtgaaatacatcagtgggggga-aactaagacgaaggCGAGATCAAGGGAGGTTTCGTGGAAGTGGCCACAAGGTTTGCAGAGCAACGTCCTCGAAAACGGG-------------ATCGGCGCCTGGTCCCGAATTTCACACGGGGCACACTGAGCCTGCGCAACGCCTCCGCTTCCGGCCCCCAAACGCGGCGCGTGCGCGCTGGGCTC-CGGCGGTCCGCCCGGCTGGCCTCTGAGCTTACCTCTTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCTGTCCAGGGACTGGCACGCCCGCCGCTTTGCACTTCCGATTGGCGAGGGGATG-CCCCCC-TCCTGTTGTCCCTACTTCGAccacagattggttccgaattagttggtacggccc--cctggcctgtaacgacaggtgattggctgagacgtccttt-tcacagcGAATGTTAGGCGTTCGGCTCGTGGTATCCCCTAGCAACCGCCTCTTATTACAGATCTGAACCAATCATAAGTTGGCCCGCCCCT-GATGCTACCAGATGCGGCCGTCGATTG-------------GTCGACATGACCGTCAAGTCTCCTTGCGGAAGTGCGCTCCGCACCGACAAACATGCCCATACATTTGATTGGCTCCTGCCCTGCGGTAGCCCTGCCCCCACCTTCAGGACACAGATTTCAA--AGCGCGCTCAGCAACCTCGGCTG-TATTTATTGATACAAGAAAGATCACC-CGAGAGTCAGGGACGT-GGCG-----GCGAGGGGCCCTGGAaatctccagataccaaagctggaagggcgtggagtcttctccagttctcctag-tttacagatgttgtgacctaggcttaCAATGGGCCTGGGGTATG---AAAGTGGGACGT-----------GAGCTGCGGGGGTCAAAGAGCCGGTTTGGTGGAGGTCAGCGCCACAGCGCGCCGTGCCAGGAAGACTTTATTCTGCGCCTCCTG------------GGGCAAAGAGAGGTGGAGGTGTGACAGCCCTCTTCCC-CAGCCCCTTTCCGTGTTCCCCA--GGGGCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctcagagatgaggcgtccgtaggagttagccCGAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACAGGAACGGAAGCCACTCCTGACACGCT---------------------------CTTCGAAGTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45412046 2430 + 49145316 ATGGCAACAGCCACCACTTC-TGAGTG---TGCTTTGGTATGGTTCTAAA---TTCTGAGTGTTCACTCTTGTTTAGCCTTAGTCACAACCAATGGCTAAAGTGTCC-CTCCCCCCA------GCTCCATTCATG---TCT--CTGATGAA-------GTAGATAAGGC---CAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCGTGCTCTTTATTGCCTCTGATCAGGCCTTTCCCCTCCTCCAGCAGCTCTCGAAACAGGTCCACAGGGCCAGAACTTGGGGCTCCCACCTCTGCTGCCTCAAGCTCAGGCAGTGAGTTCTGATGTCTGGCTTTCTTCCGTAGGAATTCTGTACGGGCCTGGGG---AGAAAGTTACAGGCAAGACATTAAAAACCTAAAGGT------A-ATTCAAGAACTTTT-----------AAGTCTGGTG------CGCACCACAGGAAACAGCAGTC------------------------------CAGGGT--GCTGGGTTTGTA-AGAAAGGG--------------------GGCACCTGTCCT---AGC-AGGGGTGAGGGTAGG---------------CAGATAAGGCAACAC------CTGGGTTTTGTAAACTGC--CTTTCAAATAGTAAACCACA---CATCAAGGATGGCTGGGAGGAGGTCCCTGGCCTAAACCAAAGGGGTTCCTAACCTCAAGTGAGACAATTAAAA-------------------------------CAGCTATA---------------------------------------------------------------------AAGGTAGAACAA--ACTGCATTA-GGTCAGATGATCTGGATTCCAGGCATGGCTCCAAGTCATTACCCCAAGT--------------------------------------------CCATTGATGAAGCCCT-----------------------GTCTCCCACC----------------------------TTCAGGAC---------------------------------------------------AAAGCTCTCAGCAGCCTA---------------------CTGAGATTCTAAAAACCCAGACTACCTCC---------------------------CTCCCAGTGTGG---AGGATCAGACTGGCTAAGGAACTGAAAGTTAGGTGTACACCAAACAGATTTAAGGAGCTATACATAAAGCCCATGTTTGTGTGTGTGT--------------------------------------------------------CT---GGGGGT-------------------------------------------------------------------------------GGTGCAGGGAAAGGGCTCGCC------CAAGGGGGTGGAGact---------tcccctccct--------------------tgacgccatctcacttcgtgccacggagatgacaatgcctctttaagaaagaacggtgcttaagggggattctggaagtcaggcgttctgcatgcagttagcatac----agtaactgctcaataaatagACTGTGCAAGCCAACTAGAAAGTGATCCGAATTTCCTCAAACTGTCCAAGGAATCCTGAATTCGGTAAACA--TTTATGCTTCTCTTTTGTGCTAGACACTGCTCTAGCCATGTGAAATACATCAGTGGGGGGA-AAC-AAGACGAGGGGGCGATCAAGGGAGATTTCATGCAAGTGGGCACAACGTTTGCCGAGCAACGTT-TCGGAAAAGAG-------------GTCCGCGCCGGGTCACGAATTACATACGGGGCACACGGCGCCTGCGCAACGCGTCCACTTCCGGCCCCCTACCATGGCGCCTGCGCGCTGGGCCC-CGGAGTTCCGCCCGGCCGGTTCCCAGGCTTACCTCCTGCTGAGCCAGCAGCACCCTCCGCTCACGCTCCTTCTCTTCCTCCCGGGCCTGGGCCTCGTCACGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCAGTCCACGGACTGGCACGCCCGCCTCTCTGCACTTCCGATTGGCGAGAGAATG--CCCCCTCCCTCTTGTCCCTACTTCGACCACAGATTGGTTCTTAACTCATTGGTACGGCCC--CCTGGCCTGTAACGACAGGTGATTGGCTAAGACGCCCTTTATCTCAGCGAATGCCAGGCTTTTGGCGCGTGGTATCCCCTAGCAACCG---CTTTTCACATATCCGAGCCAATCGCAAGTTGGCCCTCCCCT-AATG---CCAGATTCGGCCGCCTATTG-------------GCCAACACAACCATCAAGTCTCCTTGCGGAAGAGCACTTCGAACGGCCACACATTCCCATGCATTTGATTGGCTCCCGCCCTGATGTAGCCCTGCCCCCACCTTCAGGACGCAGATTTCAA--AGCGCGCTCAGTCACCTCGGCTG-TGTTTATTCATAGAAGAAAGATCACC-CGAGAGTCTGGGACGT-GGCG-----GCGAGGGTCTCTGGAAATCTCCAGATCCTAGAGCTGGAAGAGCGTGGGGTCTTCTCTAGTTCTCCTAGTTTTACAGA---TGTGACCTAGGCTTACAATTGGCCTGGAGTCTG---AAGGTGGGACAT-----------GGGCTGCAGGGGTCAAAAAGCCGGGTGGGTGGAGCTCAGCGCCACAGCGCGCCGTGCGAGGAAGACTTTGTTCTGCGCCTCCTG------------AGGCAAAGAGAGGTGGAGGTCAGACAGCCCTCTCCCC-CAATGCCTTTCAATGTCCCCCACGGGGTCCCTCT--CAGGG---ACCCGCCTGG-CTCACCGTCTCTCTCtgacgtttgagctgagagatgagacgaccgtaggagttagccagAGCCACAGTGTACGCCATCAGGATGCTGGAGGAGACACGAACAGAAGCCACTCCTGACACGCTCCTCCATTCTATACAAACGCCTGGCTCCTTCAAAGCCAG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3663549 2703 + 145441459 ACAGCAGTAACCAAC---TTACAGGTAATATCTCTCAGTCATATTCTAAAAATTTTAGAGTGCTTATCACCATATCCTAACAGTCACAGCCAGT-----------CCCCACCCCC-----------------ATGATTCCA--CCAAAAAA------------TGAGGC---CAACTTACCTTTTCCCGTCGCTTCTCTTCCTCATGCTCTTTATTGCCTCTGGGAACTCCTTTCCTTTCTTCCAGCAGCTCCCTAAACAGGTCCACAGGGCCAGAACTTGGAGCTCCTGGGTCTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTGCCTGGCTTTCTTCCGTAGGAATTCCGTACGGGCCTATGA---AG--GGTTATAGGGAAGACATTCAGAACCCAGAAGTGCTGAGG-ATACAAGAAT-GGTCCATGGGCAGGGAgggcagtggtagcacacacctttgaacctagcattcaggagacagaggcacatggatctctgaattcaaggccagcatggtctacagagtgagttagttccaggactacacagaaaaatcctgtcttgaaaagaGGGGGTGGGGGTGGGGCAAATATTGAGAGCAAGAAGAGATACCATTTCTAACTTGGAGTGGAGAATCGATGTTTTTAGACAGTAAAC--TGGGCTATCAGAGATAGTTCAGAGAAGATCCCTGACCTAAAACAGAAGGCTTCCCAGTCTCAAGTGATGCAAGGAAAACCCACTCAGGTATAGGTATAGGTGGCTTGTTCAGCCATAGAGCCCCTGCCTTGTGTGTAGTTCCAAATTCAGTCCCCAACACAAGTATGTATATACTCCCAAACTTGTAAGGTAATCAAA-TATTGCTTTCTGGACAAAGGATCTAAATCCAAGGTATGGCTCCAGGTCACCACTCCAAGTACAACCTGACCCCAGATAGGGATGGTCTCTGATTCACAATTCTCCCCTTTCTGCAGCCTTAGTATCTGGGATTAATTACAAGCGTCACCTttttgtttgtttgttttgttttgttttgttttttaagacagggtttttctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcagaaatccacctgcctctgcctcccaggtgctgggat--caaaggcgtgcgccaccgccactacccggctTTTTTTTTTTTTTTTAAGCCCACACTAATTCATGATCAGATTGGCCAAGGGACTTAA------GTGTAAACCAAACTAATCGAGTA------ACTTAGAGTCTgtg---atgtgtgtgtggtcttcaatactagcgttcaagtggaacaggcaagctgagttcaagaccagcctggtctacgtagccagttccataacagccacggctacacagaccctgttccaaataaaacCTCCAGATGCTCTTTTCTTGGCAAGCAATGAGGGAGGG-AGAAAAGACATGCC------CAACGAAGTGGACCCCGGCTTGTCCGCCCTTTGCC------------CTCCTTGCTGAAGCCGTTGTACTCAGAGCAA----GGTGACCGCACCCCTCCAAG------TTGTTCTAAGAGGGAATTTCTCAAAGCAAGCGCTCAGAAGGAAGGGAGCATACACAGAGTGGGTGATCAGTAATTAACTTGTGCGGGCAACCTATAAAGTAATCAGAAT-------ATTTGTCCAA------------------------------CTCTTCCAGTATGCTAGTCTCTGGTCCCTCA---------ACACCAGTGGGGAAA--------------------TCTAGGAAGGTTTCTTGGAAGTTAGCACAGGATTTTCAGAGAAACATCGTCGAA--------------------------------------------------CACACAGA--------------CCCGCTCCCGGCAC----------CGAGTGATAGCTAGGCCCGCCGCGCT---TCTGGGCGGTCCCCAGGCTTACCTCTTGCTGGGCGAGCAGCACCCTCCGCTCCCGCTCCTTCTCCTCCTCCCGGGCCTGGGCCTCGTCGCGCCGCACGCGGGCAACATTGTCCTTGTTCCGGACGTGCCAGCTCTTCTTCGGCAAGATATTCATGGCTCCAGTGCCGACCTCGGACTGTCAGGCCCACTCTTCAGCACTTCCGATTGGCTCGAGGATG--CTCCCGCCCCATGGTTCCACCCTTGCTCGTGCATTGGTTCTGGGCCAATTGTCACGTCCCATCCTAGCCT-TGTTTAGAGATTATTGGCTGAGA-GCCTTCCATCTCAGCCAATCCTAAGCATTT------------------GTAACC----------------------------TGAGTTGCTCCACCCCCGGACGCTGCTTGATGAGGCTGTTGCCTGTCTATTCCTTTAAGCAGACATAACC--TAGCTCTTC-------AGGCCGATTTGGACC------------------------TGGCCCCTCCCCA-----AACCCCGTCCGAGGCTTCAGAACG-GGGTTTCAA--AACGCA--AAGCGGCCTTGACTGTTGTTTATTAATAC-----GGTTCAAT-TGAGAGTGTAGCATTCGGGTG-----GCAGAGGGC--GGGGAATTT---GGTTCCAGAGATGAAAGAG------------------TCCCATCA-CTTG-ATATGAAGTCACTGAAGCTGA-----------GGGGCTG---AAGGT------T-----------CAGCCAGACTTATCAGGAAGTTCCATTCCTTGAGCTCAGAGCCACAGCTCGCTGGGCCAGGAAGACTTTATTCTGCACTTCCTG-----------CGGGCAAAAAGGAGCGAAAGTGAAGCACACCTTTT----CATTCTTCTTTCATAGTCTCAT--AGAGCCCTTT--CCGGGGAAATCAGCCTGG-CTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGATGAGGCGTCCGTAACAGTTAGCCAGGGCTACGGTATACATCATCAGGATGCTATGGAAGACAGGAATGAAAATCACTCTAGAAAAACA-----ATCATCTTCAT-CATATGGCTCCTTAGAAACCAgg i mm10.chr7 I 254 I 288 s canFam3.chr1 19622991 2203 - 122678785 GTGCCAATAACCCACACTG--GGAGTGCTGTGTTCCAGTA-----CTGAG---TTCTCTGTGTCAG--CTCATTTCATCCCCACCCTAC---------------CTCTCTGTTCCCATCAGTCACCCCAGACTTTACCCCTGACTGACAGGGACGGGTGTGGGGGGGGCGCGCAGCTTACTTTCTCCTGTCGCTTTTCTTCCTCATACTCTCTATTGCCTCTGGTCGCCCCTTTCCCTTCCTCCAGCAGCTCCCGAAATAGGTCCACAGGGCCAGAACTGGGGGCTCCCGCCTCTGCTGCTTGGAGCTCAGGTAGCGAGTGCTGGTGCCTGGCTTTCTTCCGTAGGAATTCTGTGCGGGCCTGGGGGAAAGAAAGTTACAGGCAGAGCATTCATTGCCTAGCCAT------GCCTCCAAGAAC-TGT-----------GAGACCGGTG------CCAAGCACAGAGAAT-------------------------------------CCCCGT--GCTGGTGCTGAG----------------GGCTCATCAGAGCATCACCCAGCCT-------GGGGGAGAGGATGGG---------------AGAATGAGGTGACAC------CTGGGTTT-GTACGCTGC--CTTT-----GGTGAACCA-------------------------------------------GAAGGGTTTCCCAACCTCAGCTGGCACAATAAAAA-------------------------------CAGCTAGG---------------------------------------------------------------------AAGGCAGCCCAAAATTTGC-----GAGCAGGCGACCAGAAATACAG-TAAGGCTCCAGATCACTGTCCC---T--------------------------------------------CGACCAC----GTGCA-----------------------ATCTGCTGAC------------------------------------------------------------------------------------CAAA--------------------------------------GTGAGCTT-TAAAAGCCCAGACCACCTCC---------------------------CGGCCAGCGGTG---AGGGCCAGATTCGTTAACAAACTTCAAACTCCGTGCACACTAGA-AGCT---AGAAGTTACTCCGAGAACCCCCG---------------------------------------------------------------------GGGTTGGGGGC-------------------------------------------------------------------------------CGCG-G-GGAGAGGGCTGGCC------CCACAGGGGGA----TGGG-TACGTCCCACTTCTC------------------------------------TGCACAGCGGAG--GGCAGTG-CCCTCTGGGCACGAACAGAGC----------------AGGTCCAGCGCTCTGCTCGGGGCGAGCATAC----AGCAGACGCTC--CAGAGGGGTCGGGCAGGAACACTAAACGTGGGTCTGCGTTTCTTTGAACTGCAC-AGGATTCATTTTTTCAGCA-----------GCCCCTACTCTAAGCCAGGCAC-ACCCCGGCCTCACGCAAAACG--AGTGGCGGAA--ACCAGGGCAAAGGGGAGGCCCAGGTGGG----------GAAGCCTCA----------GGTAGGGCCCGCGCAGGCGAGCCCCTGCGTTTCCAACCGCGCCCAGCTCCTCCAGCCTCACGGGAGGCACTGCGCGTGTGCGCCATC-CCGCTTCCGGCCCCTCCCCCACGCGCCTGCGCGCTCGGCCC-GGGAGTCGCGTCCGACCGCACTCGGGGCTTACCTCCTGCTGAGCGAGCAGCACCCTCCGCTCACGTTCTTTCTCCTCCTCTCGGGCCTGAGCCTCGTCACGCCGCACGCGGGCGACATTGTCCTTGTTCCGGACGTGCCAACTCTTCTTGGGCAAGATATTCATGGCGTCGTAGCCGTCCACCGACTG-CAGGCCCACCTCTGAGCACTTTCTATTGGCGAGAGGATG---CCGTTCCCTGTTGTTCCTGCCTCAGCTACGGATTGGCCCTGGGCTGGCTGCCACGCCCC-TCCAAGTCCGTAGCGAGCGCTGATTGGCTGAGATGCC---------------------GAATTCGGGT--TGGTGTAGCCTGGAGACCGCCTCTTCACCAGGTCCTGAGCCAATCAC---TTGTCCCCGCCCT-GAAGCTACGGGACGCGGCCGCTGATTG-------------GCTGGC-------------CTTCTCGAGG--------------CCGATA-------------ATCTGATTGGCC-------------GGC-------------TCAGGATGCAAGTTACAAACAAAGCGCTCTGCAGTCTCAGCGG-CGTTTATTGGTACGAGAAAGGTTAACGCGAGAGTGAGGG-----GGTG-----TC--AGGGCCCCGGAAATCT-------CCGCAGCCGG--GGACTTAGGGTCTTCTCAAGTTCTCT----TTTACAGATGAGGTG---CGGGCTTCCATAGGGTCCGGGGGCAGGATGAAGTGGGCCATGGTCCCGAGCAGGGCTAGGGAGGTCGAAGAGCCCCGGTGGCCGAGCTCAGTGCCACAGCGCGCTGTGCCAGGAAGACCTTATTCTGCGCCTCCTGGGTAGAGGTAAAGGGTAAAGAGAAGTGCAGGTGAGGCCGACCGCTCCCCACCATTTCTTTCAACATCC------AGGACCCCCTACCATGA---ACCCGCTTTGCCTCACCGTCTCTATCTGGCGTTTGAGCTCAGAGACCAGACGTCCATAGGAGTTAGCCAAGGCCAGGGTATATGCCATCAGGATGCTATAGG-GACGGAAATGGAAGCCATACCCAGGGGGCTCTTAGCATATCTTCAGTGTAAAGGCTCCTTAGAAACCGGG i canFam3.chr1 C 0 C 0 a score=84819.000000 s hg38.chr19_GL949753v2_alt 135474 36 + 796479 gatgtggacgcctaagcccctcctcgtctgggctca s panTro4.chr19 59069540 36 + 63644993 gatgtggacgcctaagcccctcctcgtctgggctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946242 36 + 60714840 gatgtggacccctaagcccctcctcgtctgggctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712274 36 - 106955855 gatgtggacccctaagcccctcctcgtctaggctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999478 36 + 64156825 GATGTGgacccctaagtccctcctcgtccaggctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55024120 36 + 59248254 GATGTGgacccctaagtccctcctcgtccaggctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130352 36 + 51301725 GATATGGACCCCCAAGCCCCTCCTCGTCCAGGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841485 36 + 50890351 GATGTGgacccctaagcccctcctcgtccaggctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414476 13 + 49145316 GATG-------------------TCATCTA----CA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625194 28 - 122678785 GATCTGGACTCCC-AGCCCCACCCCACCC------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3666252 288 + 145441459 I a score=2513756.000000 s hg38.chr19_GL949753v2_alt 135510 672 + 796479 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCGTCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAATTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACAAAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGgggagagagggaggga-------------gag-aggcgggagCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGCTCTGAAACA-CAAGAGTCTGTGCCT---CCAttttttttttttttt s panTro4.chr19 59069576 672 + 63644993 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctacgccccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGTGCCAGGAGTCTGAACACTGAATGGGGAGAGAGGGAGGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGCGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAAGGGATCTGAAACA-CAAGAGTCTGTGCCT---CCtttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946278 673 + 60714840 aggagttcagtctcc-cagcccctccgcct---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacgtt-------------gcctgctc--------------------ccacgcccaagcctct-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGCCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGGCTGTCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACATAGAGCCAGGAGTCTGAACACTGAATGCGGGGAGAGGGACGGA-------------GAG-AGGCGGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAACACCAAGAGTCTGTGCCT---CCtttttttttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712310 668 - 106955855 aggagttcagtctcc-cagcccctccgcct---tcagatccagcagtcataagtcccgcgcacctcctccttcggacccagcagtcc--aggagcctag--gcctcctctctcagactcagTATGTT-------------GCCTGCTC--------------------CCACGCCCAAGCCTCT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGGCCACCTCACCTGGAGATCAGCAGAAGGGGCACAGCAAAAGCCTGGGTCCCCAGGAAGAAAAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACAGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTAGGCTCACGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGGGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACACTGGAGATGGCCAGACCCAGGAGAAGGACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGGGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGG-AAGGCACGGAGAAAGGGGATCTGAAAAA-CAAGAGTCTGTGCC-------ttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 59999514 667 + 64156825 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagtacatt-------------gcctgctc--------------------ccacccccaagccttt-----------------------cctctcttggacgcaggTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCACATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------TTTTTTTTTTTTT-- i rheMac3.chr19 C 0 M 1177 s macFas5.chr19 55024156 663 + 59248254 aggagttcagtctcc-cagcacctccgcgt---tcagatccaggagtcctaagtcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGTTCAAGTAGAGCCAGGAGTCTGAACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAATCTGTGCC-------tcttttttt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47130388 666 + 51301725 AGGAGTTCAGTCTCC-CAGCACCTCCGCCT---TCAGATCCAGGAGTCC-AAGTCCCGCCCACCTCCTCCTTCGGACCCAGCAGTCC--AGGAGCCTag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTGGAGATCAGCAGAAGGGGCGCAGCAAAAGCCTGGGTccccaggaagaagaggaagttCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCAAGTAGAGCCAGGAGTCTGAACACTGAatggggggagagggaggga-------------gag-aggcaggaacCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACG-CAAGAGTCtgtgcc-------ttttttgtttgtt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46841521 665 + 50890351 aggagttcagtctcc-cagcacctccgcct---tcagatccaggagtcctaaatcccgcccacctcctccttcggacccagcagtcc--aggagcctag--gcctcctccctcagactcagTACATT-------------GCCTGCTC--------------------CCACCCCCAAGCCTTT-----------------------CCTCTCTTGGACGCAGGTG----GT---GGCCC----------------CCAGATCACACGCATTCAAACCCAGACCCAGAAGTCTGGCCCACCTCACCTTGAGATCAGCAGAAGGGGCGCAGCAAACGCCTGGGTCCCCAGGAAGAAGAGGAAGTTCTGGGTGGTCTCAGGGAGGCTGGAAATAGACTCGGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACACGGCTTAGAAGGCGGGATCCTG-AAGTCAAGACAGGCTGGGCTCACGTAGAGCCAGGAGTC--AACACTGAATGGGGGGAGAGGGAGGGA-------------GAG-AGGCGGGAACCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGGGGAACGCTGGAGATGGCCAGACCCAGGAGAAGAACCAAGGGGAAAAAGAAATTCGCCGTGGAGGCCCGGAAGGTGCGGGCAGCCGGAGAGCAGGTGGAGAAGAGGGTAAGCTGGTGGGGGTAAGGCACGGAGAAAGGGGATCTGAAACA-CAAGAGTCTGTGCC-------tttcttttttttt-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45414489 611 + 49145316 AGGACTTCAGTCTCC-CAGC-------------------CCAGGAGTCCTAAGTCCCACCCTCCTCCTCCTCC-----------TCCTTTGGACCCTAG--GCCTCCTCCCAC------------------------------------------------------------CCCGAGCCTCT-----------------------CCTCTCTCCGACGCAGGTG----GT---GGCCC----------------CCAGATCACGTGCATTCAAACCCAGACCCAGAAGTCTGGGCAAACTCACCTGGAAATCAGCAGAAGGGGTACAGCAAAAGCCTGAGTCCCCAGGAAGAAGAGGAAGTTCTGGGCGGTCTCAGGGAGGCTGGAAATAGACTCAGGGATCTGGGCCCAGATGGACGACTGCCCCCGGAATGGACCACATAGCTTAGAAGGTGGGATCCTG-AAGTCAAGATAGGCTGGGCTCACGTAGAGCCAGGAGTCTGAACGCTGAACGCAGGGAGAGGGAGGGA-------------AAG-AGGCAGGAGCCTCTCGCACTTACAGGAAGATGCTGTAAAGCAGAGGAACGCTGGAGATGGCCAGACCCAGGAGGAGGACCAGGGGGAAAAAGAAATTCGCTGTGGAGGCCCGGAACGTGCGGGCGGCCGGAGAGCAGGTGAAGAAGAGGGTGAGCTGGCAGGGG-AAGGCACAGAGGAAGGGGATCTGAAA---CAACGGTCTGTGCC-------TCCTGCtttttt--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3666540 708 + 145441459 AGAGGTTCAGGCTCCATACCTCCTCCCCCTTCATCAAATCGATAAATCCACACCCTAGCCCTCCT--TTCCTCAGA-CCAGGAATCC--A--AACCCAG--ATGTCTTTTCTTAGACCCTAAGCATTCACACTCCGACTCTCCTGCTCTTGATTTATAGGCATCCCGGCCAGCCCCACGTCTCTGTTGTATATAGGCACCCAGCCCACCTCTCTAGCACTCAGGTGCCCAGA---AACTCCTTTCTCTTTCAAACACTAAATTACACACATTCAAAGTCTGACT---------------GCTCACCTAGAGAGGATCAGAAGAGGTACAGTAAAAGCTTGGGTTCCCAGAAAGTAGAGAAAATTCTGGGCAGTCTGAGGGAGGCTCTCAATGGCCTCAGGGATCTGGGCCCAAATGGACAGCTTCCCGCGGAACGGGCCACACAGTTTCGAAGGTGGGATCCTGTAGGGGGAGACACACTGGATTCA------GTCA--AGTC-----------------GAGCTAGAGTGA-------------GAACAAACAGAAGTCTCTCGTACTTACAGGAAGATACTGTAAAGCACGGGAACTGCAGAGATCGCCAGACCCACAAGGAGAACCAGGGGGAAAAAGAAGTTTGCCGTGGATGCTCGGAAGGTGCGGGAAGCCGGTGAGTAGATGGAGAAGAGGGTTATCTGGTAGGGA-GAGGCGAGGA-AATGGAGGTGTAAGACT-CAAGAGTCAATCCTTT-GCTTTTCCCTGTTTCTT-- i mm10.chr7 I 288 I 1 s canFam3.chr1 19625222 638 - 122678785 ----------CCGCC-AGACCCCTCCTCCC---TCAGACCCGGGAGTCC-AGGCTCCTCCAACCT-------CAGACCCAAGAGTCC--AGGCCCCCAGCCCCCTCCCTCCTCAGACCCAGGA-----------------G-----TC--------------------CTGGCCCCCAACCCCT-----------------------CCTTTCTTAGAAACAGGCA----GTAGGGGCCC----------------CCAGGGAACA------CAAACTCAGACCCAGGATTCTGGGCTCCCTCACCTGGAGATTAAGAGAAGAGGCACAGCAAAAGCCTGGGTCCCCAGGAAAAAGAGAAAGTTCTGGACGGTCTGAGGGAGGTTGGAAATAGACTCAGGGATCTGGGCCCAGATAGACGACTGCCCTTGGAATGGACCACACAGCTTAGAAGGTGGGATCCTG-AAGAAGTCAGAGACAGTGTTCAAGGATGGCCAAGATTCAGAATCCTGGATGAGGGTGGAAGGAAGGAGGGAAGGAGAAGGGAG-AGGCAGGCCCCTGCCACACTTACAGGAAGATGCTGTAAAGCACGGGAACAGCGGAGATGGCCAGAGCCAGGAGAAGGACCAAGGGGAAAAAGAAGTTCGCTGTGGAAGCCCGAAAGGTGCGGGAGGCCGGGGAGCAGGTGGAGAAAAGGGTGAACTGGGGGGAG-AAGG-------------------AGACA-CAAGACCCTGAGCCCTGGCCTGTCCTTTTTCAT--- i canFam3.chr1 C 0 C 0 a score=-567.000000 s hg38.chr19_GL949753v2_alt 136182 9 + 796479 tttttgaga s panTro4.chr19 59070248 5 + 63644993 ttttt---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946951 5 + 60714840 ttttt---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712978 5 - 106955855 ttttt---- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45415100 9 + 49145316 tttttgaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3667249 9 + 145441459 TCTTGGAGC i mm10.chr7 I 1 I 29 s canFam3.chr1 19625860 9 - 122678785 CGTCCAAGA i canFam3.chr1 C 0 I 29 e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=1093.000000 s hg38.chr19_GL949753v2_alt 136191 14 + 796479 cagagtctcgctct s calJac3.chr22 45415109 14 + 49145316 cggagtttcgctct i calJac3.chr22 C 0 I 627 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M e panTro4.chr19 59070253 0 + 63644993 C a score=-415.000000 s hg38.chr19_GL949753v2_alt 136205 11 + 796479 gtcgcccaggc s panTro4.chr19 59070253 2 + 63644993 ---------tt i panTro4.chr19 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e ponAbe2.chr19 55946956 0 + 60714840 C e calJac3.chr22 45415123 627 + 49145316 I e nomLeu3.chr10 102712983 0 - 106955855 C e chlSab2.chr6 46842186 0 + 50890351 C e papAnu2.chr19 47131054 0 + 51301725 C e macFas5.chr19 55024819 0 + 59248254 C e rheMac3.chr19 60000181 1177 + 64156825 M a score=178978.000000 s hg38.chr19_GL949753v2_alt 136216 94 + 796479 ttttttttttgagac-agagtctcgctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattctcgt s panTro4.chr19 59070255 95 + 63644993 ttttttttttgagacaagagtctagctc-tgtcgcccaggctggagtgcagtggc---------tctcactgcagcctcc-cctcccgggttcaagctattttcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55946956 86 + 60714840 --------ttgagac-agagtctcgctc-tgtcgcccaggctggggtgcaatggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102712983 86 - 106955855 --------ctgagac-agagtctcgctc-tgtcgcccagactggagtgcggtggc---------gctcactgcagcctcc-cctctcgggttcaagctattctcgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55024819 87 + 59248254 -----tttttgagac---agtctcgctc-tgtggcccaggcgagagtgcagtggc---------gctcactgcagcctcc-cctcctgggttcaagctattctcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131054 87 + 51301725 -----tgtttgagac---agtctggctc-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattcttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842186 92 + 50890351 ttttttttttgagac---agtctcgctt-tgtcgcccaggcgggagtgcagtggc---------gctcactgcagcctcc-cctcccgggttcaagctattctcgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415750 103 + 49145316 ttttttttttaaggc---agttttgctcttgttgcccaggctggaatgtaatgccgtgatctcagctcactgcaacctccgcctcccgggttcaagctattctcct i calJac3.chr22 I 627 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I e rheMac3.chr19 60000181 1177 + 64156825 M a score=1132733.000000 s hg38.chr19_GL949753v2_alt 136310 402 + 796479 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC s panTro4.chr19 59070350 403 + 63644993 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatcttggctcacttcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcctgccactaagcccggctaa--tttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatccacccgccttagtctcccgaagtgctgggattacaggcgtgagcc-actgcacccggccTACCTGCCTCTCCTTTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947042 402 + 60714840 gtctcagcctcccgagtagctgggattacaggtgtgcaccaccactcctggctaatttGTTTTGCTGttgttgttatttgtttgttttctctttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcctgagtagctgggattacaggcgcccgccaccaagcccggctaa---ttttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggcgatccacccgccttagtctcccaaagtgctgggattacaggcgtgagcc-accgcacccggccTACCTGCCTCTCCTTTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713069 401 - 106955855 gtctcagcctccc-agtagctggggttacaggtgggcaccaccactcccggctaatttGTTTTGCTGttgttgttgtttgtttgttttctctttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctctcgagtagctgggattacaggcgcccgccaccaagcccggctaa---tttgttttgtatttttagtagagacggggttttgccatgttggccgggctggtctcaaactcctgacctcaggtaatccacccgcgtcagtctcccgaagtgctgagattacaggcgtgagcc-accgcgcccggccTACCTGCCTCTCCTTTTTAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001375 393 + 64156825 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttGTTTCGC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i rheMac3.chr19 M 1177 C 0 s macFas5.chr19 55024906 379 + 59248254 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcg------------------------ctgtttttgagacggagcctcgctctgtcgcccaggccggagtgtagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagtcaggctggtctcaaactcctgacctcaggtgatcaacccgcctgagtctcccaaagtactgggattacaggcgtgagcc-gccgcgcccggccTACCCGCCTCTCCTTTTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131141 396 + 51301725 gtctcagcctcccaagtagctgggattacaggtgtgcaccaccactcccggctaatttgtttcgctgttg-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccagagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcttcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctgatctcaaactcctgacctcaggtggtcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcgcccggcctacccgCCTCTCCTTTTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842278 393 + 50890351 gtctcagcctcccgagtagctgggattgcaggtgtgcaccaccactcccggctaatttGTTTCAC---TG-------ttgtttgttttctgtttttgagacggagcctcgctctgtcgcccaggccggagtgcagtggcgcgatctaggctcactgcgaccttcacctccctggttcaagcaattcccctgcctcagcctcccaagtagctgggattacaggcgctcgccaccaagcccggctaa--attttttttgtatttttagtagagacggggttttgccatgttagccaggctggtctcaaactcctgacctcaggtgatcaacccgcctcagtctcccaaagtactgggattacaggcgtgagcc-accgcacccggccTACCCGCCTCTCCTTTTTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45415853 382 + 49145316 gcctcagcctcccaagtggctgggactgcaaacatgcaccacctcacctggctaattt----------tg------------tgtttt-tgtttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggtatgatctcgggtcaccgcaacctccaccttccagtttcaagcagtt-ccctgcctcagcctccagagtagctgggattacaggcacaggccactacacctggtttttgtttgtttttttagttttagcagggacagggtttcaccattttggccagactggtcttgaactcctgacctcaggtgatgcacccgcctcagcctcccaaagtgcagggattgcaggcatgagttaacctcgcccggccTACCTGCCTCTCCTTTTTCCC i calJac3.chr22 C 0 C 0 e mm10.chr7 3667258 29 + 145441459 I e canFam3.chr1 19625869 29 - 122678785 I a score=289308.000000 s hg38.chr19_GL949753v2_alt 136712 94 + 796479 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACCCCTC---C s panTro4.chr19 59070753 90 + 63644993 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGCCCTAGACTc------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947444 94 + 60714840 GAACCAGGAGTCTGAGCCCCTTGCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATCCTC-AGACATATAAGTCAGAATGccctagacccctc---c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713470 97 - 106955855 AAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTGAGTCCCCAGATcctc-agacatgtaagtcagaatgccctagacccctccttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001768 97 + 64156825 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCccagagtctaagtccccggatcctc-agacatagaagtcagaatgccctagactccttcttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025285 97 + 59248254 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTccttcttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131537 97 + 51301725 GAACCAGGAGTCTGAGCCCCTTCCTTATCTAGGACCCCAGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGCCCTAGACTCCTCCTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842671 97 + 50890351 GAACCAGGAGTCTGAGCCCCTTCCTCATCTAGGACCCCGGAGTCTAAGTCCCCGGATCCTC-AGACATAGAAGTCAGAATGccctagactcctccttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416235 97 + 49145316 AAACCAGGAGTCTGAGCCCTTTCCTCATCTAGGACCCCAAATTCGGAATTCCCGGATCCTC-AGACATATAAGTCAGAATGCCTCAGACCCTTCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19625898 90 - 122678785 GAAACAGAATCCCTGGTTCTTTGCTGCCGTCAGATCTGGGAGGCCGGATCCCCTCTTCCCCTGGACGGAAAAG-----ACGCCCTAATCCCCTCC--- i canFam3.chr1 I 29 C 0 e mm10.chr7 3667258 29 + 145441459 I a score=1600437.000000 s hg38.chr19_GL949753v2_alt 136806 405 + 796479 TCTCAGATGCAGTAG---TCTGTcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGGAGTGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC s panTro4.chr19 59070843 404 + 63644993 -ctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatccaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccaatacctcctgcctcagacccaagggt-cccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAATTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCGGGGCCGGGCCGGAGTCAGGGCAGCGGCGGCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947538 405 + 60714840 tctcagatccagtag---tctgtcctccaaccccctcctc----tctcaggaccgagtaatcgaggcccccagga---tcttccttgcccttgacccaggagtgcgggccccagtacctcctgcctcagacccaagggt-cccccctgctccttaccttcttcagGTAGAAAAGCAGCACGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAC------GGGGCAGGGCCGGGCCCGAGTCAGGGGAGCAGCGCCCTGGAGTTTCCCCGCCTCCACCGCCCCGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713567 395 - 106955855 tctcagatccaggag---tctgtcctccaaccccctcctc----tctcaggacctagtaatccagcccccctgga---tattccttacccaggacccaggagtgcgggccccaatacctcccgcctcagacccaagGGT--CCCCCTACCCCTTACCTTCTTCAGGTAAAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTTCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggac------ggggcggggccgggcccgagtcaggggagcggcggcctggAGTTT---------CACCGCCCCGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60001865 412 + 64156825 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGGAcggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTATTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025382 412 + 59248254 tctcagatccaggag---tctgtcctccaaccccctcctc----tcttaagacctagtaatccaggaccccgtga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtccccccctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47131634 410 + 51301725 TCTCAGATCCAGGAG---TCTGTCCTCCAACCCCCTCCTC----TCTTAGGACCTAGCAATCCAGGACCCCGTGA---TCTTCCTTGCCCAGGACCCAGGAGTGCGGGCCCCAAtacctcctgcctcagacccaaGAGTcccccccTACCCCTTACCTTCTTCAGGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGgcacctggaactcctgggtccCCGCCAGACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAGgacggggcgggggcggggccgggcccgAGTCAGGGGCGCGGCTACTTG--GTTTCCCCGCCTCCACCGCCCTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46842768 411 + 50890351 tctcagatccaggag---tctgtcctccaa-cccctcctc----tcttaggacctagtaatccaggcctccagga---tcttccttgcccaggacccaggagtgcgggccccaatacctcctgcctcagacccaagagtcccctcctaccccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGGGGCAGCAAAGGGCAGAAAAAACTCCCCACCCAGACCACCGTCTGCGCGTAGATGAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCACACGACCCAGCGCCCCAGGACAGAGGCCACAGAGGAGCCTGAAggacggggcgggggcggggccgggcccgagtcaggggcgcggCTACTTGGAGTTTCCCCGCCTCCACCGCCCTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416332 407 + 49145316 TCTCACATCGAGGAG---TCTGTCCTAcagccccct--tc----tcttacgacctagcagtccaggcccccaaaa---tcttccttgcccgggacccaggagtccaggccccaatacctcctgcctcagacccaagggt-cccccccatcccttaccttcttcagGTAGAAAAGCAGCAGGAACTTGACCGTGTTAAGCAGAGGCAGTAAAGGGCAGAAAAAACTCCCCACCCAGACCACAGTCTGCGCGTAGATAAGCCCCAGCACCTCGTCGGGCACCTGGAACTCCTGGGTCCCCGCCAGACGACCAAGCGCCCCAGGACAGAGACCGCAGAGGAGCCTGAAGGATGGGGC-GGGGCGGGG-CGAGCCTAAGTCAGAGACGCCGTGGCCTGGAGCTCCCCCGCCTTTACCGCCCCACCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3667287 401 + 145441459 TCTCTGAGCCAATAGGACTCTGACTTCCAGCTCCCTCCTCCCATCCTCAGGGCATAGTAATCAGGGCCCTGATAACCGTCCTCCTTTCTCTAG-CCCAGGACTACAGCCTCCAACACCTGTCAGCTCAGACCCTAGGCT--ACTCCTCAGACTCACCTTCTTCAGGCAGAACAGTATGAGGAACTTAGCAGTGTTGATCAAAGGCAGTAAAGGGCAGAAGAAGCTTCCCACCCAGACCACGGTCTGCGCATAGATGAGCCCCAGCACCTCATCTGGCACCTGGAACTCCAGGGTTCCCGACAGACGACCCAGTGCCCCAGGACAGAGGCCACAGAGTATCCTGAAGGGC------AGAGTGGGAC--------AGTCATAG--GCTGCCTTTTG--GCTTTCCTAACTCTACCACCCAGCCC i mm10.chr7 I 29 I 1787 s canFam3.chr1 19625988 361 - 122678785 TCCCACATCCAGGAG---TCTGTCCTCCAG-ACCCTTCTC----TCTCAGGAGCTAGTAGCTGGGGACCCTCGCA---TCCTCCTTCCTCAGGACCCAGGAAT-------------------------------------CCACCACACTCCTCACCTTCTTGAAATAGAAAAGTAACAGGAACTTGGCCGTGTTGAGCAGAGGTAGTAGAGGGCAGAAAAAACTCCCTACCCAGACCACCGTCTGTGCGTAGATGAGCCCGAGCACCTCGTCGGGTACCTGGAACTCCTGGGTTCCTACCACGCGACCCAGGACCCCGGGACAGAGGCCACAGAGCAGCCTGAGGGGC------GGGGCGGGGCCAAGTCAGAGGCAAGCCCGCC-CGCCTTG------CCCCGCCCCTGCCGTCCTGCCC i canFam3.chr1 C 0 C 0 a score=525804.000000 s hg38.chr19_GL949753v2_alt 137211 214 + 796479 GCCAATAGGAAGCATGCGTATTGGTTGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG s panTro4.chr19 59071247 213 + 63644993 GCCAATAGGAAGCACGCGTACTGG-GGGGGGGGGGGGGGCGGGACTTTCAGGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGATGTCGCCGCGGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCCAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55947943 207 + 60714840 GCCAATAGGAAGCATGCGTATCTG-------AGGGGAGGCGGGACTTCCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGACTAGAAGGGAC----CCAGGTGTCGCCGCCGT-----CGGGGCCAGAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGCGGG-GAGATCTGCGGACCTAGCGCAAGCAAAGGGAGCAGGCAGAGGCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102713962 212 - 106955855 GCCAATAGGAAGCATGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCAGAGGGCGGGTCCTGAGGCCTAGACCGGAC----CCAGGTGTCGCCGCGGTAGGGGCGGGGCCCGAGGGAAGTAACCCACTAAAACAAAGGCGGGGAGTGGG-GAGATCAGCGGACCTAGGGCAAGCAAAGGGAGCAGGCAGAGGCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002277 200 + 64156825 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCCCAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGGGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025794 200 + 59248254 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGAACTAGACGGAGC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGGAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132044 199 + 51301725 GCCAATAGGAAGCAAGCGTATCTg--------gggggggCGGGACTTTCAAGACTCCAC------GTGGAGGGGGTGTGTCCA-------------GAGGACTAGACAGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGGAAGATCTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843179 199 + 50890351 GCCAATAGGAAGCAAGCGTATCTG-------AGGAGGGGCGGGACTTTCAAT-CTCCAC------GTGGAGAGGGTGTGTCCA-------------GAGGACTAGACGGGAC----CCAGGTGTCGCGGCGGTAGGGGCGGGGCCACAGGGAAGTAACCCACTAAAACAAGGGCGGGGAGTGGGTGAGAACTGCGGACCTAGGGCAAGCAAAGGGAGCCGGCAGAGGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416739 217 + 49145316 ACCAACAGGAAGCACGCGTAACTG-------ACGTGGGCCGGGACTTTCAAGACTCCACGTGGAGGTGGAGGAGGTGGGTCCAGAGGGCGGGTCCTGAGGACTAGACTAGACAGGACCCGGCGT-GCGGCGGTAGGGGCGGGGCCAGAGGGAAGG----CACTAAAACCAGGATGGGAAGCGAG-GCGACCTGCGGACCCAGGGCAAGCAAAGGGAGCCAGCAGAGGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19626349 104 - 122678785 GCCAATCAGAAGTGAATATATTTG-------AATAGGGGTGGAGTTTTCAGT------C------CTGGAGGGGGTGTGTCTA---------------------------------------------------------------GAGGGAAGTAACT-----------AGGTGAGAGGGGGC-GGGGCCTGCAGAC-------------------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3667688 1787 + 145441459 I a score=1106245.000000 s hg38.chr19_GL949753v2_alt 137425 308 + 796479 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCACGGCCT-C-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATATCAGAAAGAACTCGGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T s panTro4.chr19 59071460 309 + 63644993 GAATGGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-TGGTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAACGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGA------T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948150 308 + 60714840 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCAAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATATGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCACAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714174 306 - 106955855 GAATAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGA-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGACAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGG-CCCAGGCGTCCGAGTCTCCACATCTCAAGC---CTATGAGACC--GTCAGTACTTTCTCT-GGGGG------T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002477 309 + 64156825 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAAACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55025994 309 + 59248254 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGGGGGGGTGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132243 291 + 51301725 GAACAGTAAAAAGGT------GCGCGGTGAAAAGAACAGCGCGat-g-gggcagggcctgg-gtccTAGG--------------------GGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCactgaagaaggaagaaataggTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCGAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCT-GGGGG------T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843378 309 + 50890351 GAACAGTAAAAAGGT------GCACGGTGAAAAGAACAGCGCGAT-G-GGGCAGGGCCT-G-GTCCTAGT-GGGGCGGGGCCA-CAGCGAGGGGCGGGGCTCTCACTTTCTAGGAAACTGGATGAGCAGCGCGACTGCCAAGGCAGTCAGCAGATCAAAGAGCAGAAGTTTGTACATTTCCTGGCCCAGGACAGTCTCCCAGCACTGAAGAAGGAAGAAATAGGTCAGAAAGACCTCAGGACCCGAGCACCTGGAGG-CCCACGCGTCCAAGTCTCCACATCGCAAGC---CTATGAGACCCTGTCAATACTTTCTCTGGGGGG------T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45416956 293 + 49145316 GAATAGCAAAAAGGTGAAATAGCACGGTGAGAAGGACAGCACGAT-GTGGGCAGGGCCT-G-GTCCTGAA--------------------GGGGCGGGGCTCTCACTTTCGAGGAAACTGGATGAGCAGCGAGACTGCCAAGCCAGTCAGCAGATCAAAGAGTAGGAGCTTGTACATTTCCTGGCCCACGAGAGTCTCCCAGCACTGAAGAC-----AAATAGGTCAGAAAGACCTCAGGACCCGGGCACCTGGAGGCCCCACGCGTCGGAGTCTCCACATCCCAAAC---CTGTGAGACCCTATCAATACTTTCTCT-GGGGG------T i calJac3.chr22 C 0 C 0 s mm10.chr7 3669475 313 + 145441459 GAATAGAAGATAGGTGGA---GCACAAT-ATAGGAACAATCCCATCG-GGATGGGGCCT-G-CTCTAATA-GGGGCAGGGCTACCAGGAAGGGCAAGGACACTTACTTCCTAGGAAACTGGACCAACAGCGTGACCAACAGGCCCATCAGCAGATCAAAGAGTACAAGTTTGTACATCTCCTGGCCCAGCCGAGTCTCCCAGCACTGAAGAAGTAAGAAATTGGT-----AGATC---AGACTCTCCTGCCTGGAGA-CCCAAGCATCTGAGGCTCCGAATTGTCAGCAAACATCAGAACCCCACTCGTGAATTGTGT-GGGTGGGCGCTT i mm10.chr7 I 1787 C 0 s canFam3.chr1 19626453 245 - 122678785 -----------------------------AAAAGGTCAAAGAAAT-G-GGGTAGGGGTG-G----------GGG---------------------------CTCACTTCCGAGGAAACTGGATGAGCAGCATGACAGCCACGCCAGTCAGCAGATCAAAGAGCAGGAGTTTGTACATCTCCTGCCCCAGCCGGGTCTCCCAGCACTGAGGAAGGAAGGCATGGGTCAGAAAGACCTCCAGATCCAGGCACCTGGAGG-TCCAAGCATCCAAGTCTCCAAATCACAAGT---------GATCCTAACAAACCTTTTTTT-GGGGG------G i canFam3.chr1 C 0 I 12 a score=79960.000000 s hg38.chr19_GL949753v2_alt 137733 27 + 796479 CCTCGTTTTTCAAACTTTCATACCCTT s panTro4.chr19 59071769 27 + 63644993 CCTCGTTTTTCAAACATTCATACCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948458 27 + 60714840 CCTCGTTTTTCAAACATTCATACTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714480 27 - 106955855 CCTCGTTTTTCAAACATTCATACCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002786 27 + 64156825 CCTCGTTTTTCAAACATTCATACCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026303 27 + 59248254 CCTCGTTTTTCAAACATTCATACCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132534 27 + 51301725 CCTCGTTTTTCAAACATTCATACCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843687 27 + 50890351 CCTCGTTTTTCAAACATTCATACCCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417249 27 + 49145316 CCTCGTTTTTCAAACATCATTATCCTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3669788 23 + 145441459 CACTGTTTATC-AGTATTCATGCC--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19626698 12 - 122678785 I a score=1351824.000000 s hg38.chr19_GL949753v2_alt 137760 426 + 796479 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCACGCACA--CCCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCA---GAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTGGAACGCGCCCGC-ATTCAAC-------CCATCTCACA---GATGAAGCTGAGGCCC----AGTGACAGAATCAGGA----------------TTTCTTTCTttctttctttctt---tttttttt---tttttttttgagacagggtct s panTro4.chr19 59071796 433 + 63644993 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTCTCCTTCAGGGACCCAAGAGTCCCAGGCACA--CTCATGCCGTTCTCACCGGAAGTTGTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCGAGGCGAAGAAACACGGTCCTGAAGTGGAGGAGGCAGAGGAGAATGGGCCCTGACCAGGTACCCACCATGTGGCAGTTCCCTTCTCA---------GTAGAACGCGCCCGC-Attcaac-------ccttctcaga--tgaagaagctgaggccc----agtgaCAGAATCAGGA----------------TTTCtttcttttcttttttcttttcttttcttt---tttttttttaagacagggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948485 409 + 60714840 GGGAGAGTGTTCCAGCA-CCCAAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCCAGGCAGAT-CCCGTGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTTCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGGAGAAACACGGTCCTGAAGGGAAG---------GAGAATGGGCCCTGACCCGGTACCCACCATGTGGcagttcccttctcc---------gtggaacgcgcccgc-attcaac-------ccatctcacagatgaagaagctgaggccc----agtgacag--tcaggA----------------tttctttctttctttctttctt------------------tttttgagacagggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714507 417 - 106955855 GGGAGAGTGTTCCAGCA----------CCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAAGAGTCCTAGGCAGAT-CGCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGAGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGCACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGAAGGGGGGAAGGCAGAGGAGAATGGGCCCTGACCCGGTACCCACCATGTGGCAGTTCCCGTCTCA---------GTGGAACGCGCCCGC-ATTCAGc-------ccatctcacagatgaagaagctgaggccc----agtgaCAGAGTCAGGA----------------TTTCtttcttttttttcttttt---------tc---tttttttttgagacagggtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60002813 420 + 64156825 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-Attcaac-------ccatctcacagatgaagaagcagaggccc----agcgaCAGAGTCAG-----------------------ttcttttcttttctttt----cttttct---tttctttttgagacagggtct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026330 433 + 59248254 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTCTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTCAC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAGTCAGGA----------TCtttctttctttcttttcttttctttt----cttttct---tttctttttgagacagggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47132561 446 + 51301725 GGGAGAGTGTTCCAGCATCCCGAGCTCCCCTCTCCGCCCAAACC--GAGTCTGGACCCACCTAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAT-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTtccagagagagaagagcaggacCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTATCCACCACGTGGCAGTCCCCTTCTCA---------GTGGAACGCGCTTGC-ATTCAAC-------CCATCTCACAGATGAAGAAGCAGAGGCCC----AGCGACAGAgtcaggatttctttctttctctctttttctctctctctttctttt----tctttctttctttctttttgagacagggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46843714 436 + 50890351 GGGAGAGTGTTCCAGCATCCTGAGCTCCCCTCTCCGCCCAAACCAAGAGTCTGGACCCACCCAGCT---------CCATCTTTCCTTCAGGGACCCAGGAGTCCCAGGCAGAC-CCCATGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAAGTTTTACAGTCCTTAGCCTCGGAGTCGCCCCCACAAGTGATCTGTTTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACACGGTCCTGGCGGGGGGAAGGCA---GAGAATGGGCCCTGATCCGGTACCCACCACGTGGCAGTCCCCTTCTCC---------GTGGAACGCGCTCGC-ATTCAACATTCAAGCCCtctcacagatgaagaagctgaggccc----agcgaCAGAGTCAGGA----------------tttctttctttctttctttctt----tcttttt---tttttttttgagacagggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417276 413 + 49145316 GGGAGAGTGTTCCAGCACCCCAAGCTCCCCCCTCCGCCCAAACCAAAAGTCTGGTCCCACGCAGCT---------CCTTCTTTCCTCTGGGGACCCTAGCGTCCCAGGCAGAC-CCCACGCCGTTCTCACCGGAAGTTCTTTGTAATTGTAGCCACAGGTTTTGCAGTCCTCAGCCTCGGCGTCGCCCCCACAAGTGATCTGATTCCAGAGAGAGAAGAGCAGGACCACCAGGGAGGCCAGGCGAAGAAACAGGGTCCTGGTGAGGGGAAGGCAGAGGAGAATGGGCCCTGACCC-GTCCCCACCACGTGGTGGTTCCCTTCTGA---------GTGGAACGCGCTCGG-ATTCAAC-------CCAGCTCACAGATGAAGAAGCTGAGGCT------GTGACACAATCAGGA--------------------------tttttctttttt----------c---tttttttttgagacagggtct i calJac3.chr22 C 0 C 0 s mm10.chr7 3669811 345 + 145441459 ------ATGTTT----------AGCTTCTTTCC-------AACCAAGGAACAG--TCCACCCAGTTCAAGGATTCCTATCCTACCTCTAGG--CCCAAGAATGCCACCTGTGTGCCCACAGCATTCTCACCGGAATTTCTTTGTAATTATAGCCGCAGGCCTTGCATCCTTCTGCCTCCATGTTTCCCCCACACGTGATCTGACTCCACAGAGAGACCAGAAGGAACACCAGCGAGGCCAGACGCAAAAACACAGTCCTG-----------------CAAGATGAA---------GGGACTCACACTGAGGTAGTG-CCTCCTGG---------ATG---CACACTCGT-GATCTCC-------TCCTC-CAC--------------------------------------------------------TTTATATTTTTCCTACCCGCcc-------ccca---cttttcacagaggaaggaact i mm10.chr7 C 0 C 0 s canFam3.chr1 19626710 380 - 122678785 GGGAGGGTGTCCTAGCACTTTAAGCTCCTTCTTCCTCTTAAACCTGGTGTCTGAACCCATCTAGTT---------CCTGCTTTCCTTCAAGGACCCAGGA-TTTGGGGC-----CCC------TTCTCACCGGTAGTTCCTTGTAATTGTAGCCACAGGTCTTACACTCTTCAGCCTCAGCCTTGCCCCCACAAGTGATCTGATTCCAGAGGGAGAAGAGCAGGACTAGCAGGGATGCCAGGCGGAGAAACACGGTCCTGGCAAGGGGAA-------CGGAATCAGCCCTGACC-AGTGTTCACCACATGCCAGCCCCCCTCCGCCCCCCACATGTGGAACACGCTCACAattcttc-------ccacttcacaaatgaagaaactgaggctctgaTGGAACAagagtcagga----------------ttt------------------------------------------------------ i canFam3.chr1 I 12 C 0 a score=7317.000000 s hg38.chr19_GL949753v2_alt 138186 6 + 796479 cactct s panTro4.chr19 59072229 6 + 63644993 cactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948894 6 + 60714840 cactct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714924 6 - 106955855 cactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003233 5 + 64156825 cact-t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026763 5 + 59248254 cact-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133007 5 + 51301725 cact-t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844150 5 + 50890351 cact-t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45417689 6 + 49145316 caccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3670156 6 + 145441459 gagtct i mm10.chr7 C 0 I 588 e canFam3.chr1 19627090 0 - 122678785 C a score=299754.000000 s hg38.chr19_GL949753v2_alt 138192 107 + 796479 gtcacccggactggagtgcagtggcgcgatctcagctcactgcaacctccacctcccaggctcgagccattctcctgcct------------------------cagcctcccgagtagctgggactacag s panTro4.chr19 59072235 107 + 63644993 gtcgcccggactggagtgcagtggtgcgatctcagctcactgcaacctccacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55948900 107 + 60714840 gtcgcccagactggagtgcagtggcgcgatctcagcttactgcaacctctacctcccaggctcaagccattctcctgcct------------------------cagcctcccgagtagctgggactacgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102714930 107 - 106955855 gtcgcccggactggagtgcagtggcgcgatctcagctcactgcaacctctaccgcccaggctcaagccattctcctgcct------------------------cagcctgccgagtagctgggactacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003238 107 + 64156825 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55026768 107 + 59248254 gtcgtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133012 107 + 51301725 gtcgtacagactggagtgcagtggtgtgatctcagctcactgcaccctctacctcccaggctcaagcgattctcctgcct------------------------cagcctcccgagtagctgggactacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844155 104 + 50890351 ---gtacagactggagtgcagtggcgcgatctcagctcactgcaccctctacctcccaggcttaagcgattctcctgcct------------------------cagcctccccagtagctgggattacag i chlSab2.chr6 C 0 I 58 s calJac3.chr22 45417695 121 + 49145316 atcgcccagactgtagtgcagtggcgtgatctcggctc-------tctccacctcccaggctcaagca---cttctgccttgagaagtaggaggctcctccaagtagcctcccaagtagctgggactactg i calJac3.chr22 C 0 I 4 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C a score=22232.000000 s hg38.chr19_GL949753v2_alt 138299 9 + 796479 aagccacta s panTro4.chr19 59072342 9 + 63644993 aagccacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949007 9 + 60714840 aagccacta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715037 9 - 106955855 aagccacta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003345 9 + 64156825 aagccacta i rheMac3.chr19 C 0 M 128 s macFas5.chr19 55026875 9 + 59248254 aagccacta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133119 9 + 51301725 aagccaCTA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417820 9 + 49145316 gggccacta i calJac3.chr22 I 4 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=53959.000000 s hg38.chr19_GL949753v2_alt 138308 35 + 796479 ccgccgggctaatattcgtatttttactacagacg s panTro4.chr19 59072351 35 + 63644993 ccgccgggctaatattcgtatttttactacagacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949016 35 + 60714840 ccgccgggctaatattcgtatttttactacagacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715046 35 - 106955855 ccgccgggctaatattggtatttttactacagaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026884 35 + 59248254 tcgccgggctaacttttgtattttcactagagaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133128 35 + 51301725 TCGCcgggctaacttttgtatttttactagagaca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417829 35 + 49145316 tcgccgggctaatttttgtatttttagtagagatg i calJac3.chr22 C 0 C 0 e mm10.chr7 3670162 588 + 145441459 I e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=57765.000000 s hg38.chr19_GL949753v2_alt 138343 31 + 796479 gggtttcatcatgtttgtcaggctggtctcg s panTro4.chr19 59072386 31 + 63644993 gggtttcatcatgtttgtcaggctggtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949051 31 + 60714840 gggtttcgccatgtttgtcaggctggtctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715081 31 - 106955855 gggtttcaccatgttcgtcaggctggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026919 31 + 59248254 gggtttcaccgtgtttgtcaggctggtgttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133163 31 + 51301725 gggtttcaccgtgtttgtcaggctggtgttg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417864 31 + 49145316 ggctctcatctcgttggccaggctggtctcg i calJac3.chr22 C 0 C 0 s mm10.chr7 3670750 31 + 145441459 ggaactcactttgtagaccaggctggcctcg i mm10.chr7 I 588 C 0 e canFam3.chr1 19627090 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=26225.000000 s hg38.chr19_GL949753v2_alt 138374 12 + 796479 aactcctga--cct s panTro4.chr19 59072417 12 + 63644993 aactcctga--cct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949082 12 + 60714840 aactcctga--cct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715112 12 - 106955855 aactgctga--cct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55026950 12 + 59248254 aactcctga--cct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133194 12 + 51301725 aactcctga--cct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417895 12 + 49145316 aactcctga--cct i calJac3.chr22 C 0 I 12 s mm10.chr7 3670781 14 + 145441459 aactcagaaatcct i mm10.chr7 C 0 I 1 s canFam3.chr1 19627090 12 - 122678785 gaatccaga--tct i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60003354 128 + 64156825 M a score=527561.000000 s hg38.chr19_GL949753v2_alt 138386 198 + 796479 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGGTATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA s panTro4.chr19 59072429 198 + 63644993 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccAACAGAGTCAGGATTTGAATCCCTGGATTCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CGTGAGGCTGGAACCTGAGCAGGATAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949094 198 + 60714840 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAAAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGTGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATGCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715124 198 - 106955855 cagcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggccAACAGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCCACCCTTCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003484 198 + 64156825 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i rheMac3.chr19 M 128 C 0 s macFas5.chr19 55026962 198 + 59248254 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccAGCGGAGTCAGGATTTGAATCCCTGGATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133206 198 + 51301725 cagcctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcctggccagcggagtcaggatttgaatcccTGCATCCGATATCAGCAGGATTTCCGTGTCTTACCTGTCAGCGCCAACATCCCTCTGACCGCCCCGACCCTCCAT---CATTCCCAGCCATCCC--CATGAGGCTGGAACCTGAGCAGGATAAAA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45417919 198 + 49145316 ccatctcggcctcccagagtgctgggattacaggcgtgagccaccgagcccagccA--AGAGTCAGGATTTGAATCCCTGGATCCGATATCCGCAGGATTTTCGTGTCTTACCTGTCAAGGCCAACGTCCCTCTGACCGCCCCCACCCCTCAT---CATTCCCAGCCCTCCCAACATGAGGCTGGAACCTCAGCAAGATTAAA i calJac3.chr22 I 12 M 244 s mm10.chr7 3670796 156 + 145441459 ctgcctctgcctccc-gagtgctgggattaaaggcgtgcgccaccacgcccggct-------------------------------------------CTTCTCTGTCTTATTTGT-AGAACCTTTTTCCACCTGTCCCTTTCCCCCTTCTGTCTGCACTCCCTTCCCATCC--CATGAGTCCAGAACCTAAGCAGGATCAAG i mm10.chr7 I 1 C 0 s canFam3.chr1 19627102 118 - 122678785 ---------------------------------------------------------------------------cactgggtccCATATCCAGGGGATTTCTGTGCCTTGTGTACTAGAGCCAGTGTCTTTCACACCAGCCCTGCC----GT---CATCCCCAG-CACACC--CACAGAGGTAGAACCTGAGCAGGATAAAA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=446991.000000 s hg38.chr19_GL949753v2_alt 138584 161 + 796479 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- s panTro4.chr19 59072627 161 + 63644993 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAATTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGCGGGA---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949292 161 + 60714840 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAACACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGACATCTCCTGGGAGGGGGA---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715322 161 - 106955855 ACGATCTGGCGACTCCGAGTGTAGCCCTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGAACAAAGTTGACCACAGCGATGAAGATGGACGGAAGGTAATTCACCCCAAGCTTCAGCAGTGGCAACTCCTGGACAAGGGGCATCTCCTGGGAGGGAGA---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60003682 161 + 64156825 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i rheMac3.chr19 C 0 I 384 s macFas5.chr19 55027160 161 + 59248254 ACGATCTGGAGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCCCAGCGATGAAGATGGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGCTTCTCCTGGGAGAGGGA---- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47133404 161 + 51301725 ACGATCTGGCGACTTCTAGTGTAGCCTTCCAGTGGAGCAATGAGCTTGAACACGGGCGGCAGCACAAAGTTGACCACAGCGATGAAGATAGACGGAAGGTAATTCACCACAAGCTTCAGCAGTGGCAACTGCTGAACAAGGGGTGTCTCCTGGGAGAGGGA---- i papAnu2.chr19 C 0 I 1 s mm10.chr7 3670952 161 + 145441459 ACGATCTGTCGGCTTTGAGTGTAGCCCTCTAGTGAGGCAATGAACTTGAACACAGGAGGCAGCACAAAGTTGAACAGAGAAATGAAGATGGATGGTAGATAATCCACCAGAAGCTTGAATAGTGGGGTCTGTCGGACAAGGGGCGTCTCCTGAAAGGGAGA---- i mm10.chr7 C 0 I 46 s canFam3.chr1 19627220 165 - 122678785 GCAATCTGGTGGCTCCTGGTGTAGCCCTCCAGCAGGGCGATGAGCTTGAACACAGGTGGCAGCAAGAAGTTAACCCCAGAGATGAAGATGGATGGAAGGTAATCCACCAGGAGCTTTAGCAGTGGCATCTGCTGGACAGAGGGCGTCTCCTGGGAGAGAGGGTGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=119309.000000 s hg38.chr19_GL949753v2_alt 138745 59 + 796479 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG s panTro4.chr19 59072788 59 + 63644993 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949453 59 + 60714840 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----ACGAGCCAAGCTTAAGATCCTCCCCCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715483 59 - 106955855 TGGATCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGTCAAGCTTAAGGTCCTCCCCCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004227 59 + 64156825 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i rheMac3.chr19 I 384 C 0 s macFas5.chr19 55027322 59 + 59248254 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCCAAGCTTAAGGTCCTCCCCCAGA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47133566 59 + 51301725 TGGACCATGAGTAGAGGCT-TGGGGTCCTGG-----AGGAGCTAAGCTTAAGGTCCTCCTCCAGA i papAnu2.chr19 I 1 C 0 s canFam3.chr1 19627385 64 - 122678785 TGGATCAAGCAAAGAAGCTCTGGGCTTCTGGTCCTCCAGAACCTTGCTAAATGTCCTCCCCCAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e calJac3.chr22 45418117 244 + 49145316 M e chlSab2.chr6 46844259 58 + 50890351 I a score=13926.000000 s hg38.chr19_GL949753v2_alt 138804 13 + 796479 CCTCTTCttc--------ttc s panTro4.chr19 59072847 13 + 63644993 CCTCTTCTTC--------ttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949512 7 + 60714840 CCtcttt-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715542 13 - 106955855 CCtcttcttc--------ttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004286 21 + 64156825 CCTCTTCTTTGTTGTttattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027381 17 + 59248254 CCTCTTCTTTGttg----ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133625 17 + 51301725 Cctcttctttgttg----ttt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418362 12 + 49145316 -Ctttttttt--------ttt i calJac3.chr22 M 244 C 0 s canFam3.chr1 19627449 13 - 122678785 CCTTTTCTTC--------CTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=236005.000000 s hg38.chr19_GL949753v2_alt 138817 121 + 796479 ttcttc-----tttttttttttttttttgagacagagtctcgctctgttgcccagcctagaatgcagcggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct s panTro4.chr19 59072860 125 + 63644993 ttcttcc-ttttttttttttttttttttgagacagagtctcgctctgttgcccaggctagagtgcagtggtgcgatctcggctcgc-tgcaacctctgcctcccgggttcaagtgattctcctgcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949519 115 + 60714840 -----------tttttttttttttttttgagacagagtctcgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctctgccactctggttcaagtgattctcccacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715555 117 - 106955855 tt---------tttttttttttttttttgagacagagtcttgctctgttgcccaggctggagtgcagtggtgcgatctcggctcgc-tgcaacctccgcctcccgggttcaagtgattctcctgcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004307 122 + 64156825 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027398 122 + 59248254 ttgt----tttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaacctccgcctcccgggttcaagtgattcttctgcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133642 126 + 51301725 ttgttttgtttgtttctttgtttgttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgcaatcttggctcac-tgcaaccttcgcctcccgggttcaagtgattcttctgcct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418374 121 + 49145316 tt------ttttttttttttttttttttttgaaaaagtctgactctgtcactcagggtggagtgcaatggcgtgatctcgggtcacttgcaacctccgcttcccaggttcaagcaattctcctggat i calJac3.chr22 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e canFam3.chr1 19627462 0 - 122678785 C e chlSab2.chr6 46844259 58 + 50890351 I a score=474212.000000 s hg38.chr19_GL949753v2_alt 138938 243 + 796479 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtagagactgtttttcaccatgttggtcaggctggtctggaactcctgacatcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggtgtaagccaccgcgcccagccTCTCTTTTTCCTTTAAAATCCCTAAGTCCAGGGTCCGAACATACCCTCTCCCATACTTCCT s panTro4.chr19 59072985 243 + 63644993 cagcctcctgagtagctgggattacaggcgcccaccaccacgcccgtctaa-tttttgtatttttagtcgagacgggttttcatcatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgccttagcctccctaagtgctgggattacaggcgtaagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCTCTAAGTCCAGGATCGGAACATACCCTCTCCCATACTTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949634 241 + 60714840 cagcctcctgagtagctgggattacaggcgctcaccaccacgcctgtctaa-tttttgtatttttagtaaagatgggttttcaccatgttggtcaggctggtctggaactcctgaccttgtgat-ccgcccgtctcagcctcccaaattgccgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTC-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715672 237 - 106955855 cagcctcctgagtagctgggattacaggcgc------ccacgcccgtctaa-tttttgtatttttagtagagacgggttttcaccatgttggtcaggctggtctggaactcctgacctcgtgat-ccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccTCTCTTCTTCCTTTAAAATCCCTAAGTTCAGGGTCCAAACATACCCTCTCCCATACTTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004429 244 + 64156825 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgatcccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027520 243 + 59248254 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgacctcgtgat-ccccccgcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcccagtcTCTCTTCTTCCTTTAAAACCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47133768 243 + 51301725 cagcctcctgagtagctgggattacaggcgtgcaccaccacgcccgtctaa-tttttgtatttttagtggagacggattttcgccatgttggtcaggctggtctcgaactcctgaccttgtgat-caccccacctcagcctcgcaaagtcctgggattacaggcgtgagccaccgcgcccagtctctcttcttcctttaaaaCCCCGAAGTCCAGGGTCCAAACATACCCTCTCCCATACTTCCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418495 193 + 49145316 cagcctcctgagtaactgaaattacaggcacgcgccaccacgcccagctaattttttgtatgtttaataaaaatggggtttcactatgttggccaggctggtctcgaactcctgacttcgtgat-ccgcccgcctcggcctcccacagtgctggaattgcaggcgtgagccaccgcgcacggcc-------------------------------------------------CCCTTACTTC-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19627462 94 - 122678785 CAGCACCCCAA---------AGTCCAAACATACACCCCCAT-CCCTCCTAA----------------------------------------------------------------------GAT-GCCCTC----CAACCT----------TGGAAATGTAAGT----------------------------------------------TCCAGGATGGAAGGACTCTCCTCCC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3671113 46 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=3626012.000000 s hg38.chr19_GL949753v2_alt 139181 1486 + 796479 CTCTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCGTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCCCGGTTCCCCAGGTCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACC----------------CGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGTCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAC---A-----AACTTttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tgaagcgatccac-------ctgtctcggtct-------------cccaa----------agtgctggggttacaagcattagccaccgatcccagccCTGGCGCATCCTTTTCCTACACGCTTGGA---GCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCTTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGAAGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGAGACCCCTCATATTGGGACAAATGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGTTCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG s panTro4.chr19 59073228 1498 + 63644993 CTCTAAGGTCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGACGCCGTAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCTTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAG-GGCGCGGGCCTCCCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------GGACACAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-TCCCAAGACCCGCCCCTGGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGTGGCCCTGCGCTTTATTCCTGGCCT-----CAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCTGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCACCGCTCGCTTCTTGTGCTTACTTAGAAAAAAAA---Attttttttttttttttttttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagtgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCTTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGACCCCGCTCCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGAG-AGACCCGAGAGATGGGATGTGAAAGGACAGCCAGGAA-AGGGGTTATGGGGGGACCCCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGTGGAG------ACAGTCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAA--AGAGAGGCAGAAACCTAGGAGACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55949875 1490 + 60714840 --CTAAGATCTCTGGCATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAACCCAGTAGACGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCAACACTGTCTCCTCCAGCTCCACCTGAAGGCAGGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCACTCCAGAGATCCTCCTTAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGAAG----TCC-----TGGTTC----------CACCCGC------TCCGGGGCGC----------TCCGGGAAACCAGC---------GGCCCTTTACA--------GCCCCGCCC-----------CTTCGCGGCC-------------------------------------------------------AGATCCAGCAACCCAAGCCCCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCTGAGGCTCCGCCCAGCA-CCCCAAGGCCCGCCCCTGGTCTGCCCTGCCCA----TCAGAGGCTCTGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TATCAAG--AC-GCCCCGCTGGCTGCTCCCATCACTTAACTTTGAACCAAATTGCCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTTAAAAAAAACCAAA-----AACTTtcttttttttttttt------agggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcg-------------tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcttgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGA---CCTCGGGCAGCCTTATCTCGGCCTCCTCTCAACACTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCTTACCCAGTTGCAGACCCCGCTTCCTAATCGCACCTTTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGATGGGATGTGAAAGGACAGCCAGGAACAGGGGTTATGGGGGGACCTCTCATATTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATAGGGAAAGAGTCAAAGAGGCGGAGAC----ACAGTCATT-GAAGGCAAAGTCCTGGAGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCcaaagagagaggcagaaaccgaggagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102715909 1501 - 106955855 CTCTAAAATCTCTGGTATCCCAAACTTCCGTCCCCTCC----------CTCCACCGTTGGAAATGTAGGTTCCAGGACCC----CCTGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCTCCACGGTGCACCCCGTAGCCCAGTAGATGCCATAGAAGGCTGCCCCCAGGAGCGCGACCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCAGAAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTTAACGTGAACTGATGCAGGCGGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----TGGTTC----------CACTCGC------TCCGGGGCGC----------TCCAGGAAACCAGC---------GGCCCTTTACA--------GCCCTGCCC-----------CTTCGCGGCT-------------------------------------------------------GGATCCAGCAACCCAAGCACCCATCCCTCCGCGGCCAAT--CTCAGCACCCCAGGCCCCGCCCCGGAGGCTCCGCCCAGCA-TCCCAAGACCCGTCTTTCGTCAGCCCTGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATTCCTGGCCT-----GAAGTTCCAGTTCAGCTG-TTTCAAG--ACGGCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGGCTT-AGGCCCCGCCCGCTTCTTGTGCTTACTTAAAAAAAAAA---A-----AAAGTttttttttttttt----------ggtatagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtctcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccCTGGCGCATCCTTTTCCTACACCCTTGGACCTCCTCGGGCAGCCCTATCTCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCATCTCTCCGGAGGCCCCATCACCGAGTTAGGCCCTGTGCGTTATCTCAGCCCGGTCCTGTCTGGTCCCTACCCAGTTGCAGATCCCGCTCCCTAATCACACCTTTAATTCGTACAAGATGATGCGCTGTCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCTCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCAGACACCGAGCTGAGAGGGG-AGACCCGGGAGACGGGATGTGAAAGGACAGTCAGGAACGGGGGTTATAGGGGAACCCCTCATACTGGGACAAACGGGGAAGATGAACCCTAAGGCCTTGGGTACTAGGCGAGTTCCCACCAGACCAGATGGGGAAAGAGTCAAAGAGGCAGAGAC----ACAGTCATT-GAAGGCGAAGTCCAAGGGA--GATTCAGAGACAGATCTGGGGTG------CAGGCACCCCAAAGAGAGAGGCAGAAACCTAGGAGACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60004673 1457 + 64156825 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGTTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggcgtctaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCcacagagagaggcagaaacctaggagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55027763 1457 + 59248254 CTGTAAGATCTCTGGCATCCCAAACTTCCATTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGA-CC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTGTTCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGGCGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCTTCTCCCCACCAGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAACCCAAGCCCCCATCCCTGCGCGACCAAT--CTCAGCACCCCGGGCCCCGCCCCCGAAGCTCCGCCCAACACCCCCAAGACCCGCCCCTGGTCAGCCCCGCCCA----TCAGAGGCTCCGCCCCCAGGCGGCCCTGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCTT-----------------A-----------------CTTttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgctggggttacaagcatgagccaccgatcccagccTTGGTGCATCTTTTTCCTACACCCTTGGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGACCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGAG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATGGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGCGGAGCTGCC-----ACCAGATGGGGAAAGGGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACAGACCTGGGGCA------CAGGCACCCCACAGAGAGAGGCAGAAACCTAGGAGACAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47134011 1442 + 51301725 CTGTAAGATCTCTGGTATCCCAAACTTCTGTTCCCTCC----------CTCCATCGTTGGAAATGTAGGTTCCAGGACCC----CCCGGCTTCCTCTTCCAAGACCCTCCGCACCTGCAGCGCCACGGTCATCTCTGTAGCCCAGTAGATGCCATAGAAGGCTCCCCCAAGGAGTGCGATCACCAGCAGGTTGAGCAGCACCCGCACCAACCAAACCCTGGCTTCCTGGCCCAGAGTCCGCACAGCAGCCTGACGCCGCACCACTGTCTCCTCCAGCTCCACCTGAAGGCACGAGAGATGCCCGCTTGGACTCCATTTCCCAA-GGCGCTGGCCTCTGGGTTCCCCA-----GGCTCTCCAGAGATCCTCCTCAACGTGAACTGATGCA-GCCGTCTCCCCACCCGCTAACAACCTCTGCAG----TCC-----CGGTTC----------CACCCGC------TCCGGGGCGC----------TCTAAGAAACCAGT---------GGCCCTTTACA--------GCCCTGCCC-----------CTCCGCGGCC-------------------------------------------------------GGATCCAGCAAccccagcccccatccctgcgcggccaat--ctcagcaccccgggccccgcccccgaagctccgcccaacacccccaaga----------------cccgccca----tcagaggctccgcccccaAGCGGCCCCGCGCTTTATGCCTGGCCT-----GAAGTTCCAGTTCATCTA-TATCAAG--AC-GCCCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAATTGCCTTAAAGCCCCGCCCGCTTCTTGTGCtt-----------------a-----------------cttttttt--------ggtagagagggagcc------------------------------------------tccctatgt----------------------------tgccc--------aggctggtgtcgaactcctagac--tcaagcgatccac-------ctgcctcggtct-------------cccaa----------agtgccggggttacaagcatgagccaccgatCCCAGCCTTGGTGCATCTTTTTCCTACACCCTTTGA---TCTCGGGCAGCCTTATCGCGGCCTCCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAGGAGCTGCCTAGCGTCTCTCCGGAGGCCCCATCACCGGGTTAGGCCCTGTGCGTTATCTCAGCCCAGTCCTGTCTGGTCCCTACCCCGTTGCATAACCCGC-CCCCAATCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCAGAGGCCGAAGTTCCAGGCTGAGAACACCCGGTGGCTGTAGCTGGTCAGATCCCCGGACTCCGCCAGCAGTGTCTGCTTCAGCCCGGACACCGAGCTGAGAGGGG-AGAC---------AGGATGTGAAAGGACAGCCAGGAACGGGGGTTATAGGGGCATCCTTCATATTGGGACCAACGGGGAAGACGAACCCTAAGGCCTTGGGTACTAGGGGAGCTGCC-----ACCAGATGGGGAAAGAGTCAAAGAGGCGGAGACACCTACAATCATT-GAAGGCAAAGTCCAAGGGA--GATTCAGAGACTGACCTGGGGCA------CAGGCACCccacagagagaggcagaaaccTAGGAGACAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45418688 1452 + 49145316 --CTAAGATCTCTGGCGTCCCAGACTTCCGTCCCCTCC----------CTCCACCGTTGGAATTGTAGCTTCCAAGACCC----CCCGACTTCCTTTTCAAAGACCCTCCGCACCTGTAGCTCCACCGTGGACTCTGTGGCCCAGTAGACGCCATAGAACGCTGCCCCCAGGAGCGCGGCCACCAGCAGGTTGAGCAGCACCCGCACCGACCAAACCCTGGCTTGCTGGCCCAGCGTCCGCACCGCAGCCTGGCGACGCAGCATCGTCTCCTCCAGCTCCACCTGAAGGCAGGAGACGTGCCCGCTTGGACTCCATTTCCCAAGGGCGCGGGCCTCTCGGTTCCCCAGGCCTGGCTCTCCAGAGATCCTCCTCCACGTGAACTGCTGCA-GACGTCTCGCCACCCGCTAACAACCTCCGCAG----------------TC----------CACCTGC------GGCCGAGCCC----------CCCGGGAAACCTGC---------GGCCCTTTATC--------GCCCCGCCC-----------CTCCGCGGCC-------------------------------------------------------GGGTCCCGCAATCCAAGCCCCTAACCCTCTGTGGCCAAT--CTCAGCACCC--------------AAAGCTCCGCCCAGCA--TCCAAGACCCGCCCCTTGTCAGCCCCGCCCA----CCCGAGGCTCCGCCCTCAGGCGGCCCAGCGCTTC-TGCCTGACCT-----GAAGATCCAGTTCAGCGGTTAACAAG--AC-GTGCCGCTGGCCGCTCCCATCACTTAACTTTGAACCAAGTTGCCTT-AGGCCCCGCCCGCTTCTTGGGCTTACTTTAAAAAA------A-----------------TTGTTTTTGGCGAGGGGGtagagtgggagtc------------------------------------------tccctatat----------------------------tgccc--------aggctagtctcgaactcctggac--tcaaatgattcac-------ctgcctcggtct-------------cccga----------agtactggagttacaagcataagccaccgagcccATCCCTTGCGCATCTTTTTCCTACATCCTTGGA---CCTCGGGGAGCCCTATCGCGGCCTGCTCTCAACCCTCTCATTCCCCAGGACCTGCCTTTCTTGGAGAAAGAGCTTCCTAGCGTCTC-CCTGAGGCACCATCGCTGGGTTAGGCCTTGTGCCTTATCTGAGCCCAGCCCTTTCTGATCCCTACCCAGTTGCACACCGCGCCCCCTAAGCGCACCTGTAATTCGTACAAGATGATGCGCTGGCGCAGCCGCACGTGGACGTCCCCGCTGAGGCCGAAATCCCAGGCCGAGAACACCCGGTGGCTGTAGCTGGTCAGAGCCCCGGACTCTGCCAGCAGTGTCTGCTTCAGCCCGGACACGGAACTGAGAGGGG-AGACCCAGGAGACGGGATGTGAAAGGACAGTCAGGAAC-GGGGTTGTGGGGGGA--------GATGGGAGAAACGGGGAAGATGAACCCTAAAGCCTTGGGCACTAGGCGAGCTGCC-----ACCTGATGG----AGAGTC--AGAGGCAGATACACATACAGTCACTAAAAGGCAAAGTCCAAGGGA--GACTGAGAGACAGACCTGGGGTG------CAGGCATCCCAAGGAGAGAGGCAGTAACCTAGGAGATAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3671159 1150 + 145441459 CCCTAAAATCCCAGGAATTCTACACCCCAGTTCACTGCCACAGGGCTTCTTCACCTGTGGAAATGTGAGTTCTAGGACCCAAGGACCCTCCTCCTCCTCCAAGACCCTCTGTACCTGTAGTGTCAAGGTGTACTCGGTGGCCCAGTAGATGCCATAGAAGGCCGCCCCGAGCAGCGCGAGGACCAGCACGTTGAGCAGCGCCCTCATCGACCACACCTTGGCTCGTTGGCTCAGAGTCTGCTCCGCAGCACGGCGCCGGACTACTGCTTCCTCTAGGTCCACCTAAGGCCAATAGGGACTGCTTCTGGAAATCCGTCCCTTCA-GGC-----------------------CTGACTTT----------TCTTCGGATTAAACCGATATA-GCCCTCTCCTT-----------------------------------GTTC----------CATACTC------TCCAGGGCTG----------TCCGTGGGACCATT---------TAATTCTTGGG--------GCACTGGGC-----------CTCTGAAGTC-------------------------------------------------------TGGACTTGCATCCCAGG--TCTGCCACTCCTTAGTTCAT--CCCAGAACTCCAAATCTCGCCCTA----------CCTTCT-GTCCAAGGCCTACCCTTCTTTGGCCCAACACAGAACCCCAGGATCCCCCTCCTATGAGAC-----------TTCCAG---------------CTAGTTCACCTT-TTTGAAGCCAC-GTCC---------------TCATTTCACTTGGGACCA----GTCTT-AGTTC------------------------------------A--------------GTCCCTTTTCT----------------------------------------------------------------------------------------------------------------------------------------------AAATGAATTCC-------AGGTCCCAGCCC-------------CCCAA-------------------------------------CCCTCCCACCC------CGTCAGTCTCCTCCA-----------TGGCAGGCATTCCTAGCCTGGCTTCTGCTTAGCTGTCT-------------------------------------CTTAGCA---------------------------ATGCCTTGCTCCTTATCTTAGTTGGATCTTGTCTGGTTCTCATTTAGTGGTAGCTCCACCTCCCCGAGCACACCTGTAGTTCATACAAAATGATGCGCTGGCGCAGCCGCACGTGCACGTCCCCGCAGAGGCCAAAATTCCAAGCTGAGAACACTCGGTGACTGTAGCTGGTCAGAATGTCTGACTCCGCCAACAGTGTCTCCTTCAACCCGGACACCGAACTGAAAGAAC-AGACCA-------------------------CAGGAGAAGTGTTGGTGGGGGCACCTTACTTAC------------GGAACATACACTCAAAATCCTGTG--ACCAGG-----TGCC-----ACCTGTT------CAAGTCAGATAGTTACAC------AAAGTCTTT-GGAACCAAAGACTGA-AGA--GAT----AGGAGAATTTAGGGGACACTGCCAGATCTCCAGAGGAAAGAGGGAGATATCTAGGAAAGAG i mm10.chr7 I 46 I 2258 s canFam3.chr1 19627556 1435 - 122678785 --------------------------------------------------------------------------------------------------CCAGGACCCTCCACACCTGAAGCTCCACGGTGGCCCCTGTAGCCCAGTAGATTCCGTAGAAGGCCGCTCCCAGGAGTGCAATCACCAGCAGATTGAGCAGGATCCGCACCGACCACACCCTGGCTTGCTGGCCCAGGGTCCGCGCTGCAGCCTGGCGCCGCACCACAGCTTCCTCCAGCTCCACCTGAGGCCAGGAAAGACGTCCTTGTGGGCTCAAGTCCCACA-GACA----------GGCCCGGCA-----GGTGGTTCAGAACCCCAGCTCAACATGAACTGACACA-GCAG------CACCCTCTAAAGACTTCTGCAGgggatccctggatggctcggtggtttagcacctgcctttgacccagggcgtgatcctggagtcccgggatcgagttccgcatcaggctctctgcatggagcctgcttcaccctctgcctgtgtctctgcgtctctctgtgtctctcatgaataaataaataaaatcttaaaaaaaaaAAAAAAAAAAAGACTTCTGCAGTTCTTGTCCCAATCCCCCCATGGTCCTCTACTGGACAATTTAGATCTCCCACCT---------CTCCACA-GCCCAGGGCTCCAC--------ACCGCGCCCC----TCCGAGGCCCCGCCC------AGCCCT----------CCTGGGCTGGGGCGGAGTTCCAGTTCTACTT-TTTTtta--tt----------------------------------------ttttttt-aatttttatttatttatgatagtcac---------------a---------------------------------gagagagagagaggcagagacacaggcagagggagaagcaggctccatgcaccgggagcccgacgtgggactcgatcccgggtctccagaatcgcgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccTAGTTCTACTTTCTTGGCCTCCTTCTGGCCATGCCCAAGTCCTCACCCAGTGCAGAGG-----AGCTTCATGCCCCGCCCCCCTCCC-GCTGCCTGATTTTCCTGTCCCCTTTGA---CATCAGGTATCCCAACTGGGGCCTCGTCCCAGCCCTCTCATTTCGCAAGGCCCGCCTCCTTAGGAGAACGTTCCGCCCAGCGTCGCT--------------------TTGAGCCCCGTCTCGGGTCTGGGCCCCGCCCCCTCTGGTCCTT-------------------TCCCTGAGCTCACCTGCAGCTCATACAGGATGTTGCGCTGGCGCAGCCGCACGTGGACATCCCCACAGAGGCCGAAGTCCCAGGCGGTGAACACCCGATGGCTGTAGCTGGTCAGGGCCCCCGACTCAGCCAACAGCGTCTGTTTCAGTCCTGACACGGAGCTGAGAGAGGAAGGCCCCAGAGACGGGGTGTGGAAGGTCAGTGAGG----------GCGGGGTCACCCCTCTTAT-GGGACTAGCAGGGAA-ATGAACCCTGGGACCTTGGGAATTTGACAAGT----------------------AGAGTCAGAGACGTGCAGACACACACAGTCATG-GGAGCCAAAGACCAAGAGAGGGATTCAGGGGCCGACTGGGGAAG-----GTAGACACCCCGC--AGAGAGCCA---------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I a score=717222.000000 s hg38.chr19_GL949753v2_alt 140667 297 + 796479 GGACAGAGCCTCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAAACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGGGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACACAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac s panTro4.chr19 59074726 297 + 63644993 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-ACACAGAGATGTGGAGGAGGGACAGAGGCCCCAAAGGGA---GATTTGGAGAAAGGGAGAAAAAGACAGTGAGAAAGGAGAAACTACATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGAGCTGCGGCGGGAAGAGCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGA-GGGGGCAggccaggcgcc---atggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951365 298 + 60714840 ggacagagccccggagcgaaggggacagaaacccagagtgagagagacagaggccctgagga-agacagagatgtggaggagggacacaggccccagaggga---gatttggagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGAGGGTCAAAGACCCATA-AGAAGTACAGGCACCTAGAGAAGGGAGCTGCGGTGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717410 295 - 106955855 GGACAGAGCCCCAGAGCGAAGGGGGCAGAAACCCAGAGTGAGAGAGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCGGAGGGA---GATTCGGAGAAAGGGAGACAAAGGCAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCATCCAGAGAAGGGAGCTGCGGCGGGAAGACCCG---AGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAGGGGGGCAggccaggcgcc---atggctcat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006130 297 + 64156825 ggacagagccccggagcgaagggggcagaaacccagagtgaaagggacagaggccctgagga-agacagagatgtggaggagggacagaggccccagaggga---gattcgaagaaagggagacaaagacagtgagaaagGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAAGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--AAAGACTCAAGAGAAGGGGGCACGCCAGGAGCC---ATGATCCAC i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55029220 297 + 59248254 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTCCAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCGGGAAGACCCGAGAAGAAGACAGAGACCCAGAGAAGATGGCAGGT--CAAGACTCAAGAGAAGGGGGCACgccaggagcc---atggctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135453 297 + 51301725 GGACAGAGCCCCGGAGCGAAGGGGGCAGAAACCCAGAGTGAAAGGGACAGAGGCCCTGAGGA-AGACAGAGATGTGGAGGAGGGACAGAGGCCCCAGAGGGA---GATTCGAAGAAAGGGAGACAAAGACAGTGAGAAAGGAGAAACTAAATCTACAAAAGATGGGGGTCAAAGACCCATA-AGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGCAGGAAGACCCGAGAagaagacagagacccagagaagaTGGCAGGT--AAAGACCCAAGAAACGGGGGCacgccaggcgcc---atggctcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420140 276 + 49145316 GGACAGAGCCCCGGATCGAAGGGGCCGGAAAGCCAGTGTGAGAGGGGCAGAGGCCCTGAGGA-AGAT--GGATGCGGAGGAGGGATGGAGGTCCCAGAGGGA---GATTTGGAGAAAGGGAGACAAAGAC--TGAGAAAGGAGAAAGAAAATCTACAAAAGACCCGGGTCAGAGATCCAGA-GGAAGTACAGGCACCCAGAGAAGGGGGCTG-GGTTGGGA------------------AGACCCAGAGAAAACAGCAGGTAGAGAGAATCAAGAGA-GGGGGCAggccaggtgcg---gtggctcac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19628991 262 - 122678785 ----CGCGCTCCAGAGAGCAGAGGGCGGGGACCCAGAGTGACAAAGACAAAGATCCTGGGGACAGACACAAATGTAGAGGGGAGACTGCGACCCCACTGGGAAAGGATTCAGAGAAAGTG-------GACA--GGGAAATGAGGGAAGAGGTCT-----AGAGAGAGGTCAGAGACTCAGAGGGAAGGACAGACGTCCAGAGAAGGGGGTGA-GGGAGAAAGACCC---------------------AAAGGGTGGAGGAC--TGAGACTCAAAGAAATGGGGCAgg---gacgcctgggtggctca- i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=33876.000000 s hg38.chr19_GL949753v2_alt 140964 19 + 796479 gcctgtaatcccagcactt s panTro4.chr19 59075023 19 + 63644993 acctgtaatcctggcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951663 19 + 60714840 acctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717705 19 - 106955855 gcctgtaatcccagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029517 19 + 59248254 gcctgtaatcccagcactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135750 19 + 51301725 gcctgtaatcccagcactt i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420416 19 + 49145316 acctgtaatcccagcactt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629253 19 - 122678785 gcggttgagcgtctccctt i canFam3.chr1 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006427 19 + 64156825 I a score=144045.000000 s hg38.chr19_GL949753v2_alt 140983 81 + 796479 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact s panTro4.chr19 59075042 81 + 63644993 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagat---cagcctggccaatgtggtgaaaccccatctctact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951682 81 + 60714840 tgggaggccaaggggggaggatcacctgaggtcaggagtttgagac---cagcctggccaatgtggtgaaaccccgtctctact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717724 81 - 106955855 tgggaggccgaggggggaggatcacctgaggtcaggagtttgagac---cagcctggtcaatgtggtgaaatcccgtctctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006446 79 + 64156825 tgggaggccgagacgggcggatcac--gaggtcaggagatcgagac---catcctggctaacacggtgaaaccccgtctctact i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55029536 49 + 59248254 tgggaggc--------------------------------cgagac---catcctggctaacacggtgaaactccctctctact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135769 78 + 51301725 tgggaggccgagacgggcggatcac--gaggtcaggagt-cgagac---catcctggctaacacggtgaaaccccctctctact i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420435 81 + 49145316 cgggaggccgagtagggaggatcacctgaggtcaggagttccagac---cagcctggccaacatggtgaaaccctgtctctact i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629272 75 - 122678785 ----aggctcagg-----gcatgatcctgggtctggggattgaatcccacatccggctccctgtggggagcctgcttctccctc i canFam3.chr1 C 0 I 85 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I a score=193134.000000 s hg38.chr19_GL949753v2_alt 141064 98 + 796479 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag s panTro4.chr19 59075123 98 + 63644993 aaaaa---tac-aaaaattagccaggcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951763 98 + 60714840 aaaaa---tac-aaaaattagccaagcgtggtggtgcatgcctgtaatcccaactacttgggaggctgaggtgggaggatcacttgaacccaggaggtggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717805 98 - 106955855 aaaaa---tac-aaaaattagccaggcatggtggtgcatgcctgtaatcccaactacttgggaggctgagctgggagggtcactcaaacccaggaggtggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60006525 100 + 64156825 aaaaa--atacaaaaagctagccgggcgaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i rheMac3.chr19 C 0 I 3618 s macFas5.chr19 55029585 102 + 59248254 aaaaatttttttaaaaattagccgggcgaggtggcgggcgcctgtaggcccagctactcgggaggctgaggcaggagaatggcgtaaacccgggaggcggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47135847 99 + 51301725 aaaaa---tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45420516 99 + 49145316 aaaaa---tttaaaaaatgagccaggtgtggtggcgggcacctgtaatcccagctacttgggaggctgagtcaggaggatcacttgaacccaggaggtggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I a score=4863.000000 s hg38.chr19_GL949753v2_alt 141162 5 + 796479 gtcgc s panTro4.chr19 59075221 5 + 63644993 gtcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951861 5 + 60714840 gtCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717903 5 - 106955855 gtCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55029687 5 + 59248254 cttgc i macFas5.chr19 C 0 I 9250 s papAnu2.chr19 47135946 5 + 51301725 cttgc i papAnu2.chr19 C 0 I 3196 s calJac3.chr22 45420615 5 + 49145316 gttac i calJac3.chr22 C 0 I 25 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=10070.000000 s hg38.chr19_GL949753v2_alt 141167 25 + 796479 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC s panTro4.chr19 59075226 26 + 63644993 ---------------------CTCC---------GAAAAAAAAAAAAAAAAAACCC i panTro4.chr19 C 0 I 118 s ponAbe2.chr19 55951866 19 + 60714840 ---------------------CTCC----------------AAAATAAAAAGGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717908 25 - 106955855 ---------------------CTCC----------AAAAAAAAAAAAAAAAGACCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420645 56 + 49145316 ctccagcctggctgacaaagactcctgctcaaaaaaaaaaaaaaaaaaaaaaaCAC i calJac3.chr22 I 25 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=422.000000 s hg38.chr19_GL949753v2_alt 141192 1 + 796479 A s panTro4.chr19 59075370 1 + 63644993 A i panTro4.chr19 I 118 C 0 s ponAbe2.chr19 55951885 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717933 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420701 1 + 49145316 A i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629347 85 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=226477.000000 s hg38.chr19_GL949753v2_alt 141193 244 + 796479 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggccctcacatggtctccttgcttccacttgtgcccgcatataatccattctcagttcttgagccagtgggacc-ttctttt s panTro4.chr19 59075371 244 + 63644993 GAGA-AGACGGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccgtgtgcaccttcactgccctggccccggcccccatcatctctcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagttcttgagcgagtgggacc-ttctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55951886 244 + 60714840 GAGA-AGACAGGCAGGTAAAGAGACTCAAGAGAGGTGGGCAAAGACCCAGGAAGGAGAT-AGAGAACCCCA-----GCAGGGGCAGAAACAGAACTGGACAAAGAGa--ccatgtgcaccttcaccgccctggccctggcccccatcatctcgcatgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcctgcttataatccattctcggttcttgagccagtgggacc-ttctttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102717934 245 - 106955855 GAGA-GGACAGGCAGGTAAAGAGACTCAAGAGAGGGGGGCAAAGACCCAAGAAGGAGAT-AGAGAACTCTA-----GCAGGGGCAGGAACAGAACTGGACAAAGAGa--ccatgtgcaccttcactgccctggccctggcccccatcatctctcacgtgaacaaccacagagggcccccacatggtctccttgcttccacttgtgcccgcttataatccattctcagtttttgagccagtgagacctttctttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420702 244 + 49145316 GAGACAGAC---CCCGAGAAGAGTCTCAAAAAAGGGGGGCAAAGACCCAGGAAGGAGATGGGAGAACCACAGCGGGGCAGGGGCAGACACAGAGCTGGACAGAGAGa--ccacgtgcaccttcaccgccctggccct-gcccccatcatct--catgtgaacaacctcagagggcccccacctggtctccttgcttccacctgtgcct-cttataatccattctctcttcttcagccagcaggacc-ttcttcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19629432 226 - 122678785 gaaa-agagggaaagggaaagggaaaggaagaagtggggcaaagacccagggagaggac-aaggaa----------gcagag--------aaaaCTGGGCAAAGAGATTccatatccaccctcaatgacctggcacaagcccccagaatctcttgagtggatgactacaga--actgccacctggcctc--tgcttccaccctcgccctcttg-aatccattct--gttcccacactggtggaacc-ttctttt i canFam3.chr1 I 85 I 4004 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=44574.000000 s hg38.chr19_GL949753v2_alt 141437 76 + 796479 gatgcaactcagaccgtattcccctgtttaagacctattccagggcttttcccttctcttaaaatcgaggc-TCTTT s panTro4.chr19 59075615 77 + 63644993 gatgcaactcagaccgtattcccctgtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952130 75 + 60714840 gattcaactcagaccgtattccc--atttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTTTTg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718179 77 - 106955855 gatgcaactccgactttaattcccggtttaaaacctattccagggcttttccctgctcttaaaatcgaggcTTCTTg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45420946 61 + 49145316 ta-gcaactcagaccatatt--------------ctattccagggcttttccctgctcttccaatctaggcttctt- i calJac3.chr22 C 0 I 2664 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=48909.000000 s hg38.chr19_GL949753v2_alt 141513 91 + 796479 gccgggcgtggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggtgcatcacctgaggtcaggagttcgagaccagcctg s panTro4.chr19 59075692 91 + 63644993 gccgggcatggtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcgcatcacctgaggtcaggagttcgagaccagcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952205 91 + 60714840 gccaggcgcagtggctcacgcctgtaatcccagcactttgggagaccgaggtgggcggatcacctgaggtcaggagttcgagaccagcctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102718256 91 - 106955855 gccgggcacagtggctcacgcctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtcaggagttcgagaccagcctg i nomLeu3.chr10 C 0 M 1121 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=242761.000000 s hg38.chr19_GL949753v2_alt 141604 936 + 796479 acaaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgggaggttgaggcaggaaaattgcttgaacccgggcggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctc----aaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaaattttagcaagacatggtggtgcacccctgtggtcccagctgctcccgaggctgaggtaggcggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccaccgcacgctagccgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggccggagcctgtaaacccagctacttgggagggtgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatg------aaaaaCAAAAAC--AAATCCCAAAACCTTGA-tcttttttttttttttagatggagtttcgctctgtcgcccaggctggagtgcagtggcgcaaactcggctcactgcaagctccgcctcc s panTro4.chr19 59075783 946 + 63644993 accaacatggtgaaaccccatttctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctacttgagaggctgaggcaggaaaattgcttgaacccgggaggcggaggttgcagtgagctgaggtcacaccactgcactctagcctgggtgacagagcaagactccgtctc-aaaaaaaaaaaaaaaaGTTGACTTTTggccaggcacattggctcatgcctgtaatcccagcaccttgggaggctgaggtgagcagatctcttgagcctaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataacatt---aaaaaaaaatttttagcaagacatggtggtgcacccctgtggtcccagctgctcctaaggctgaggtaggaggatcagttgagttccggaggcccaggcttccggtgagctatgattgcaccactgcacgctagtcgggtgacagagtgagaccctgtctcaaaaaacaaaaCAgactgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggctggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacagagtaagactctgtctcaaaaacaaacaaacaaaacaaatgaaaaaCAAAAACAAAAAC--AAATCCCAAAACCTTGAtttttttttttttttttagatggagtttcactctgtcgtccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55952296 928 + 60714840 accaacatggtgaaaccccatctctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggaaaattgcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactctagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaGTTGACTTTTggccaggcaccttggctcatgcctgtaattccagcaccttgggaggctgaggtgagcagatctcttgagcccaggagtttgagcgcagcctgggcaacatagcaagaccctgtctctataatattaaaaaaaaaaaaaaattagcaggacatggtgatgcgcccctgtggtcccagctgctccagaggctgaggtaggaggaccagttgagttccggaggcccaggcttccagtgagctatgattgcaccactgcactctagccaggtgacagagtgagaccctgtctcaaaaaacaaaaTAGACTCAgcgcggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgagatcaggagttcgagaccagcctggccaacatggcgataccccgtctctactaaaaatacaaaaaattagctgggcgtggtggcgggagcctgtaaacccagctacttgggaggctgaggcagtagaatcgcttgaatccgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgacagagtaagactctgtctca-------------aaaacaaatg------aaaaacaaaaacaaaaaTCCCAAAACCTTGA-----tcttttttttttagatggagtttcgctctgtcgcccaggctggagtgcaatggcatgatcttggctcactgcaacctccacctcc i ponAbe2.chr19 C 0 I 225 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45421007 2664 + 49145316 I e nomLeu3.chr10 102718347 1121 - 106955855 M e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47135951 3196 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=1213.000000 s hg38.chr19_GL949753v2_alt 142540 3 + 796479 tgg s panTro4.chr19 59076729 3 + 63644993 tgg i panTro4.chr19 C 0 I 188 s nomLeu3.chr10 102719475 3 - 106955855 TGA i nomLeu3.chr10 M 1121 C 0 s papAnu2.chr19 47139147 3 + 51301725 tga i papAnu2.chr19 I 3196 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=558.000000 s hg38.chr19_GL949753v2_alt 142543 2 + 796479 gC s panTro4.chr19 59076920 2 + 63644993 gc i panTro4.chr19 I 188 C 0 s nomLeu3.chr10 102719478 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139150 2 + 51301725 ga i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60006625 3618 + 64156825 I a score=8476.000000 s hg38.chr19_GL949753v2_alt 142545 12 + 796479 CACCGCTCCTGG s panTro4.chr19 59076922 12 + 63644993 caccgctcctgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719480 12 - 106955855 CACTGCGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010243 12 + 64156825 caccgcacccgg i rheMac3.chr19 I 3618 C 0 s papAnu2.chr19 47139152 12 + 51301725 caccgcgcccag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45421007 2664 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=50500.000000 s hg38.chr19_GL949753v2_alt 142557 43 + 796479 CCCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC s panTro4.chr19 59076934 43 + 63644993 ccCAAAACCTTGATTTTAACTCACACAGAATAAAGGGTTACAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719492 43 - 106955855 CCCAAAACCTTGATTTTAACTCACATAGAATAAAGGGTTATAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010255 43 + 64156825 cACAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i rheMac3.chr19 C 0 I 3 s papAnu2.chr19 47139164 43 + 51301725 caCAAAACCTTGATTTGAACTCACACAGAAGAAAGGGTTACAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423671 43 + 49145316 CCCCAAATCTTGATTTTAACTGAAACAGAAGAAAGGGTTACAC i calJac3.chr22 I 2664 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1566.000000 s hg38.chr19_GL949753v2_alt 142600 3 + 796479 AGC s panTro4.chr19 59076977 3 + 63644993 AGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102719535 3 - 106955855 AGT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139207 3 + 51301725 CGC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423714 3 + 49145316 AGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=9180.000000 s hg38.chr19_GL949753v2_alt 142603 97 + 796479 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactgtgggaggccgaggcgggtggatcacgaggtcagcagttcaa s panTro4.chr19 59076980 97 + 63644993 AAGACCGAGGATTCTGGggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcagcagttcaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e ponAbe2.chr19 55953224 225 + 60714840 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=54493.000000 s hg38.chr19_GL949753v2_alt 142700 212 + 796479 gaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggttgcagtgagccgagattgcgccactacactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa s panTro4.chr19 59077077 212 + 63644993 gaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaaagttagctgggcgtggtggcgggcgcctgtaatcccagcaacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcggaggtcgcagtgagccgagattgcgccactatactctagcctgggcaataagagcaaaactccgtctcaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953449 211 + 60714840 gaccagtctgatcaacatggtgaaaccccctttttactaaaaatacaaaaaaattagctgggcgttgtggcgggcgcctataatcccagcaacttgggaggttgaggcaggagaatcgcttgaaaccgtaaggcagaggttacagtgagccgagattgtgccattgcactctag-ctgggcaataagagcaaaactccgtttcaaaaaaaaa i ponAbe2.chr19 I 225 C 0 e mm10.chr7 3672309 2258 + 145441459 I e canFam3.chr1 19629658 4004 - 122678785 I e calJac3.chr22 45423717 0 + 49145316 C e nomLeu3.chr10 102719538 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139210 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60010298 3 + 64156825 I a score=130995.000000 s hg38.chr19_GL949753v2_alt 142912 79 + 796479 a-------agaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- s panTro4.chr19 59077289 78 + 63644993 a--------gaCTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACCACTTGCT-CCCCCACCCCAACCCGTCCCGTCA-GGGGTCAG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953660 88 + 60714840 aaaagaaaagaCTGAGGATTCTTGGGGAGGCGGTTTCTGCCACCACCACTTGCTCCCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719538 80 - 106955855 -------AAGACTGAGGATTCTTGGGGAGGGGGTTTCTGCCACCACTACTTGCT-CCCCCACCCCAACCCGTCCCGTCAGGGGGTCAG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010301 80 + 64156825 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TTCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i rheMac3.chr19 I 3 C 0 s papAnu2.chr19 47139210 80 + 51301725 -------AAGACTGAGGATTCTTGGGGAGGGAGTTTCTGCCACCACCACTTGCT-TCCCTACCCCAACCCGTCCCGTCACGGGGTCAG---- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423717 76 + 49145316 -------AAGGCTGAGGATTCCTGGGGAGGGAGTTT-TGCCAGCACCACTTGCT-CCC---CCCCCACCCGTTCTTTCAGGGAGTCAG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19633662 71 - 122678785 -------AGGACTCTGGATTCTTGGGGACTGGTCCTCTACCACCACCACTC-CT-TCCCCACGACACC------------AGGGTGGGGATG i canFam3.chr1 I 4004 C 0 e mm10.chr7 3672309 2258 + 145441459 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=599252.000000 s hg38.chr19_GL949753v2_alt 142991 257 + 796479 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGGTCA s panTro4.chr19 59077367 256 + 63644993 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGG-A-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCCTGTCATTGAAGGCACTGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55953748 257 + 60714840 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAACCATAAAAGAGAGGGGACCATTCCAGGTAACCCTGTT-GGGGGA-AGGCGACGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAAGTTCGTGTCACTGACGGCACTGGGCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102719618 257 - 106955855 GGGTGCAGGTGCCACTGACCGACGCAGGATGAGCAGGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTG-GGGGGA-AGGCGGTGCAGGGGCCACTGTGGGA------GGAGGAGGGGCTCCTGGAGCTGCACAGTCAGGGTCCGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010381 258 + 64156825 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCGACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGGGGGGGA-AGGCGGCGCGGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139290 258 + 51301725 GGGTGCAGGTGCCACTGACCGATGCAGGATGAGCAAGAGGCAGATGAGGCCAACGGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGCGTGGGCGGGGCGGGTAGAAGCCATAGAAGAGAGGGGACCATTCCAGGTAACCCTGTGTGGGGGA-AGGCGGCGCAGGGGCCACTGTGGGA------GGAGGCGGGGCTCCTGGAGCTGCACAGTCAGGGTCTGGGGTCAGGGTTTGAGGTTCGTGTCATTGAAGGCACTGGGCTCA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45423793 254 + 49145316 GGGTGCAGGTGCCACTGACCGATGCAGGATGAACAGGAGGCAGATGAGGCCAACAGCAAAGGCCCAGCACAGGTAGGTGACCGCCAGGTGTGGGCGGGGCGGGTAGAAGCCATAGAACAGAGGAGACCATTCCAAGTAACCCTGTG-GGGGGA-AGGTGG-GTCGGGGCCACTGTGGGA------GGAGGCAGGGCTCCTGGCGATGCATAATCAGGGTCTGGGGTCAGGGTTTGAGGGGCGTGT--TTGAAAGCACAGGGTTCA i calJac3.chr22 C 0 I 342 s mm10.chr7 3674567 244 + 145441459 GGATGTGGGCATCACTAACCGTCGTAGGATGCACAGCAAGTAGATGATGCTGATGGCAAAGACGGAGCACAGGTAGGTGATGGCCAGGTTCGATCGGGGTGGGTAGAACCCATAGAATAGAGGGGACCACTCAAGGTAACCCTGGG-GAGGAAGAGGCAGAACAAAGGTCATAGTGGGGCCGGGTGGAGGTAACGATCAGGGAGCTGAGTGATCTGTGTGTG--------------------TGTCGTCCAGGAAACCAGGCTTC i mm10.chr7 I 2258 I 1 s canFam3.chr1 19633733 201 - 122678785 GGGTGCGGTTGTTACTTACCGATGGAGGATGAGCAGCAGATACAGGAGGCCAATGACAAAGACAGAGCACAGATAGGTGACTGCCAGGTGTGCGCGGGGTGGGTAGAACCCATAGAAGAGGGGAGACCATTCTAGAAAACCCTGCA-GAGGAA-AAGT----------TCACCGTGGGC------TTAGG-------------------CAATCAGAATCGGGGGGTA----CTGAGGCTCG----------------------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=12211.000000 s hg38.chr19_GL949753v2_alt 143248 9 + 796479 CAGGTGGGC s panTro4.chr19 59077623 9 + 63644993 CAGGTGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954005 9 + 60714840 CAGGCGGGC i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102719875 9 - 106955855 CAGGTGGGC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60010639 9 + 64156825 CAGGTGGGC i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47139548 9 + 51301725 CAGGTGGGC i papAnu2.chr19 C 0 I 1 s mm10.chr7 3674812 8 + 145441459 AAAGTAAG- i mm10.chr7 I 1 C 0 s canFam3.chr1 19633934 6 - 122678785 ---GTGGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45424047 342 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=827427.000000 s hg38.chr19_GL949753v2_alt 143257 298 + 796479 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCACCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTCGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTAAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT s panTro4.chr19 59077632 298 + 63644993 GGGGAATCCCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGAAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGAGTCATGCAGGCCATGAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGACAGAGGCTCAGGTTCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954015 298 + 60714840 GGGGAATCTCCCAGGGACCCAGGCACCTACCTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGATGTTGGGGCCGGGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102719885 298 - 106955855 GGGGAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGACAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGAGTGGGGGTTATAGGGGCCGCAGGGCGAGGAGATCTCGAGGCCGCGAGGGCCTGGGGGAGCGCCTCCCAACCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAAACGCCAGCACGTTGAGAAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCCGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCTTT i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60010649 302 + 64156825 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCAGGCCCTGGGGGTGGGGGTTATAGGAGCCGCAGGGCGAGGAGGTGTTGGAGCCCGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGTAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGCAGGGGGCAGCAGAGAGAGAGAGGCTCAGTTTCCTT i rheMac3.chr19 I 1 C 0 s papAnu2.chr19 47139558 298 + 51301725 GGGGAAACTCCCAGGGCCCCAGGCACCTACTTCTCCTGAGAGCAAGTTGAAGAGCTGGGTGGCAAAGGTGACCaggccctgggggtgggggttatAGGAGCCACAGGGCGAGGAGGTGTTGGAGCCGGGAGGGCCTGGGGGAGCGCCTCCCAGCCAGGTGGGCAGCAGCGTCATACAGGCCATAAGCACAGAGGCCAGCACGTTGAGGAGGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCGGTGCCGGCGCCAAACTGGCCTGcagggggcagc----agagagaggCTCAGGTTCCTT i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424389 298 + 49145316 GAGAAATCTCCCAGGGACCCAGGCACCTACTTCTCCCGAGAGCAAGTTGAAGAGCTGGGTGTCGAAGGAGACCAGGCCCTCGGAGTGGGGATTATAGAAGCCGCAGGGCGAGGAGGTGTTGAGGCCGGGAGGGCCTGGGGGAGCGCCTTCCAGCCAGGTGGGCAGCAGCGTCATGCAGGCCATGAGCACCGAGGCCAGCACGTTGAGGAGCAGCAGGAAGCGCAGCAGAGAGAAGTAGGACTCGGCGCCGGCGCCAAACTGACCTGCAGGGGGCAGC----AGAGAGAGGCTCAGGTTCCTT i calJac3.chr22 I 342 C 0 s mm10.chr7 3674820 296 + 145441459 -GAGGTTCCTCTGGGGACCATGGCACCCACCTCTCCAGAGAGCAAGTTGAAAAGCTGGGTGGGGAAGGCGACCAGGCCATGAGTGTGTGGAATATAGGAACCACAGGGTGAAGAGATGTTAGGGCCAGGGGGACCTGGAGGAGCCCCTTCCAGCCAGGTGGGGATCAGCTTCATGCAGATTTCAATGACAGATGCCACCAGGTTGAGAAAGAGCAGGAAGCGCAGCAGGGAGAAGTAGGACTCAGTGCCTGCTCCAAACTGACCTGCAGAGGGCAGC----AGAGAG-GCCTCAGGTCCCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19633940 293 - 122678785 ---GGGTCTCCCAGGGCTCCAGGGACGCACCTCTCCTGACAGCAAGTTGAGGAGATGGGTGGGGAAGGTGACTAGGCCTTGGGGGCTGGGGTTGTAGAAGCCACAGGGCGAGGAGGTGTCAGAGCCAGGGGGACCCGGGAGGGTCCCTTCCAGCCAGGTGGGCAGCAGTGTCATACAGGCCTTAATTACAGACGCCAGCACGTTGAGAAGCAGCAGGAAACGCAGCAAGGAGAAGTAGGACTCGGTGCCGGCACCAAACTGGCCTACAGGGGGT-GC----AGAGAG-GCCTGGGGCTCCTG i canFam3.chr1 C 0 I 8 e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=30693.000000 s hg38.chr19_GL949753v2_alt 143555 20 + 796479 CCCGGGAGCAGGACCAGCCC s panTro4.chr19 59077930 20 + 63644993 CCCGGGAGCAGGACCAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954313 19 + 60714840 CCCGGGAGCA-GACCAGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720183 19 - 106955855 CCCGGGAGCA-GACCACCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010951 20 + 64156825 CCCGGGAGCAGGACCAGCTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47139856 20 + 51301725 CCCGGGAGCAGGGCCAGCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424687 20 + 49145316 TCTGGGAGCAGGACCAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3675116 19 + 145441459 ACCAGT-GTAGTTCCAACCC i mm10.chr7 C 0 I 114 e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=58091.000000 s hg38.chr19_GL949753v2_alt 143575 45 + 796479 CTCCTACCCCTGGACT-GGGGTCCAGCCGCGCCTTCctttctttct s panTro4.chr19 59077950 45 + 63644993 CTCCCACCCCTGGACT-GGGGTCCAGCCGCGCCTTTCTTTCTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954332 45 + 60714840 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCctttctttctttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720202 42 - 106955855 CTCCCACCCCGGGACT-GGGGCCCAGCCGCGCCtttcttttct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60010971 46 + 64156825 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCTTGCTTTCTTTCt i rheMac3.chr19 C 0 I 34 s papAnu2.chr19 47139876 46 + 51301725 CTCCCATCCCGGCACTGGGGGCCCAGCCGTGCCttgctttctttct i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45424707 45 + 49145316 CTCC-ACCCCGGGACTCGGGGCCCAGGGGCGCCGCCtttttctttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=-131.000000 s hg38.chr19_GL949753v2_alt 143620 4 + 796479 -ttct s panTro4.chr19 59077995 4 + 63644993 -TTCt i panTro4.chr19 C 0 I 52 s ponAbe2.chr19 55954377 4 + 60714840 -ttct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47139923 3 + 51301725 -ttt- i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45424752 4 + 49145316 gttc- i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e nomLeu3.chr10 102720244 0 - 106955855 C e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 143624 1 + 796479 t s ponAbe2.chr19 55954381 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720244 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139926 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45424756 1 + 49145316 t i calJac3.chr22 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2629.000000 s hg38.chr19_GL949753v2_alt 143625 31 + 796479 ttctt--tcttttctttctttctttcttttctt- s ponAbe2.chr19 55954382 22 + 60714840 t--------ctttctttctttctttc---tctt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720245 28 - 106955855 ttctt--tcttttctttttttctttt---ttct- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45424757 31 + 49145316 ttatttattttttatttatttattta---ttttt i calJac3.chr22 C 0 I 1379 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=16156.000000 s hg38.chr19_GL949753v2_alt 143656 201 + 796479 tctttctttttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcttttctttctttctttctttctttcttcctttctttcttttctttccttccttccttccttccttccttccttccttccttccttccttccttccttcctttctttctctctctctctctctctatata s ponAbe2.chr19 55954404 137 + 60714840 tctttcttttcttttctttctttctttctttctttctttctttctttctttctttttttctttctttc------------------------------------------tttctttccttccttccttccttccttccttccttacttccttccttccttccttccttcctttctttc---------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720273 139 - 106955855 tttcttttttcttttcttttcttttcttttcttttcttttcttttcttttcctctcctctcccctttcgt----------------------------------------ttcctttcctttccttttctttttctTTCT----------------------Ctctctctctctctttctatatatatatatatacatata i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e papAnu2.chr19 47139927 0 + 51301725 C e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=-3610.000000 s hg38.chr19_GL949753v2_alt 143857 33 + 796479 tatatatatatatttttcttttcttttcttttc-- s ponAbe2.chr19 55954541 16 + 60714840 --------------tttctt---tttttttttt-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720412 13 - 106955855 tatatatatatat---------------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139927 25 + 51301725 ----------tattattattattgttatttgttat i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I e panTro4.chr19 59077999 52 + 63644993 I a score=2768.000000 s hg38.chr19_GL949753v2_alt 143890 8 + 796479 tttttttt- s panTro4.chr19 59078051 8 + 63644993 tttttttt- i panTro4.chr19 I 52 C 0 s ponAbe2.chr19 55954557 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102720425 8 - 106955855 tttttttt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47139952 5 + 51301725 ----tatta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60011017 34 + 64156825 I a score=203010.000000 s hg38.chr19_GL949753v2_alt 143898 166 + 796479 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt s panTro4.chr19 59078059 166 + 63644993 tttttgagacggagtttcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcacgagtagctgggattacaggcatgcgccaccatgctcagctggtttttgtatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55954565 166 + 60714840 tttttgaaacggaatctcgctctgccgcccagcatggagtgcagtggcgcgatctcggctcactgcaacctctgcctcctgggttcaagcaattctcctgtctcagcctcgcgagtagctgggactacaggcgtgggccaccatgcccagctagtttttgtatttt i ponAbe2.chr19 C 0 M 804 s nomLeu3.chr10 102720433 166 - 106955855 tttttgagacggagtttcgctctgctgcccagcatggagtgcagcggcatgatcttggctcactgcaacctccgccttctgggttcaagcaattttcctgtctcagcctcccaagtagctgggattacaggcgtgcgccaccatgctcagctagtttttgtatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011051 165 + 64156825 tttttgagacggagtctctctctgccgcccaggccggagtgcagtggcgtgatctcggctcactgcaaccttcgcctcccaggttcaagcaattcaccgatctcag-ctcccgagtagctgggattacaggcatgcgccaccatgctcagttagttttcgcatttt i rheMac3.chr19 I 34 C 0 s papAnu2.chr19 47139957 162 + 51301725 tttttgagacggagtctcgctctgccgcccaggccggagtgcagtggcgcgatctcagctcactgcaaccttcgcctcctgggttcaagcaattctcctatctcagcctcccgagtagctgggattacaggcacgcgccaccatgctc----agtttttgtatttt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=92837.000000 s hg38.chr19_GL949753v2_alt 144064 130 + 796479 tggtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgccaggcccagccgtg s panTro4.chr19 59078225 130 + 63644993 tagtagagacgggggtttcaccatgttggtcaggctggtctcgaattcttgac-----------------ctcaggtgatccacccacctcggcctcccaaactgttgggattacaggcgtgagccaccgcgcccggcccagccgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720599 130 - 106955855 tagtagagacgaggatttcaccatgttggtcaggctggtctcgaactcctgac-----------------ctcgggtgatccactcacctcggcctcccaaattgttgggattacaggtgtgagccaccgcgcccggcTCAGCGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011216 124 + 64156825 tagtagagacg-gggtttcaccatattggtcaggctggcctcgaactcctgatnnnnnnnnnnnnnnnnn----------------------gcctcccaaactgttgggattacaggcgtgagccgccgcgcccggcccagccgtg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140119 129 + 51301725 tagtagagatg-gggtttcaccatattggtcaggctggcctcgaactcctgat-----------------ctccggtgatccacccacctaggcctcccaaactgttgggattacagacgtgagccgccgCGCGCGGCCCAGCCGTG i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675135 114 + 145441459 I e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=44845.000000 s hg38.chr19_GL949753v2_alt 144194 54 + 796479 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaaa s panTro4.chr19 59078355 54 + 63644993 cctttctcagaccc--aagagtccagacccccagcccctc----------------------------ctccctcagacccaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102720729 54 - 106955855 CCTTTCTCAGACCC--AAGagtccagacccccagcccctc----------------------------ctccctcatacccaga i nomLeu3.chr10 C 0 I 273 s rheMac3.chr19 60011340 82 + 64156825 cctttctcagaccc--aagagtccaggccctgagcccctcctccttcagacccagatcccagtcccttctccctcagatccagA i rheMac3.chr19 C 0 I 56 s papAnu2.chr19 47140248 54 + 51301725 CCTTTCTCAGACCC--AAGAGTCCAGGCCCCGAGCCcgtc----------------------------ctccctcagacccaga i papAnu2.chr19 C 0 I 64 s mm10.chr7 3675249 53 + 145441459 CTTCTCTCTGATTCAGAAGGGTTCAGGCACTAG--TCTTC----------------------------ATCCTTCAGACCAGG- i mm10.chr7 I 114 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2928.000000 s hg38.chr19_GL949753v2_alt 144248 8 + 796479 aatccagg s rheMac3.chr19 60011478 8 + 64156825 aatccagg i rheMac3.chr19 I 56 C 0 s papAnu2.chr19 47140366 8 + 51301725 aatccagg i papAnu2.chr19 I 64 C 0 s mm10.chr7 3675302 8 + 145441459 GCTGCAGG i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e nomLeu3.chr10 102720783 273 - 106955855 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=6146.000000 s hg38.chr19_GL949753v2_alt 144256 13 + 796479 cccaagcc---cctcc s nomLeu3.chr10 102721056 13 - 106955855 tcccagcc---cctcc i nomLeu3.chr10 I 273 C 0 s rheMac3.chr19 60011486 13 + 64156825 cccaagcc---cctcc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140374 13 + 51301725 cccaagcc---cctcc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675310 12 + 145441459 ----AACCAGACCTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 19634233 8 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e panTro4.chr19 59078409 0 + 63644993 C a score=487538.000000 s hg38.chr19_GL949753v2_alt 144269 412 + 796479 tccctcaaacccaggagtcc---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATCGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc s panTro4.chr19 59078409 390 + 63644993 -------------------------tcccagcccctcctccctcagacccaggAG-------TCCAGGCCCTGCCCCCAGGACAC--CACCCAAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCTTAGTTCCAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagacacaatccaacagtagaatggagaagtaaattgtggcc---tatacataagatagaatactctgtagcaataaaaaagaaACC-------Agct----gg-gt-----acagtggctcaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721069 412 - 106955855 tccctcagacccaggagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGGACAC--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCACGCCCAGGGCTGCAGGCTTCGAAAGCCTTCCTTTGTTTTCTCCTTGGATCTCCGAAGTAGCCGCACCCATTGGTCCGTCCTAGTTCTAGAGCCATAGACCACCTGGTCCCTGCTGGCATTTCTTTGCCTGGGAGGGAAAC------AGG--------CAGAAAATGAGGGGTTTCGCagccccagactgggaaccatctgaatgtagaaacaacccaacagtagaatggagaagtaaattgtagcc---tatacataagatagaatactctgtagcaataaaaaataaacC-------ggct----gg-gt-----acagtggctcaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011499 413 + 64156825 cccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgccccCAGCACAT--CACCCGAACCCCACCGCACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCCTTCCTTTGTTTTCTCCTTGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAAATGAGGGGTTTTGCagccccagactgggaaccatccgaatgtagaaacaacccaaaagtagaacggagaagtaaattgtggcc---tatacataagatagaatactctgtggcaataaaaaagaaACC-------AGTTggccgg-gc-----gcggtggctcacgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140387 409 + 51301725 tccctcagacccagaagtct---gtccccagcccctcctccctcagacccaggag-------tccaggccctgcCCCCAGGACAT--CACCCGAACCCCACCGTACCCCCGATCCTCTTCAGTGTCCATGACCAGGGCTGCAGGCTTTGCAAGCcttcctttgttttctccttGGACCTCCGAAGTAGCCGCGCCCATTGGTCCGTCCTAGTTCCAGAGCCATAGATCACCTGGTCC---CTGGCATTTCTTTGCCTGGGAGGGAAAG------AGG--------CAGAAGATGAGGGGTTTTGCAGCCCCAGACTGGGAACCATCCGAatgtagaaacaacccaaaagcAGAACGGAGAAGTAAATTGTGGCC---TATACATAAGATGGAATACTCTgtggcaataaaaaagaaacc-------agtt----ga-gt-----gcggtggctcacgc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675322 438 + 145441459 TCCCAAAGGCCCAGGGGATA---ATTGCCACTCCCCTCTCTGTCAGACCCAGGAAACCACACTCCAGCCTCAGACCCCAGGCCTCTTCCTCTAAAGCCCAGCACACCCCCAATTTTCTTCAGCGTCCATGCCCAGGGCTGTATAGTTTGAAAGCCTTCTTTCATTTTTCCCTTGGTCCGGGAAAGCTGTCGGGTCCAGTAGGCAGCCCTGGATTCAGAGCCAGAAGCCAGCTGCCCT---GTAGCCTGGCTCTTCCTAGAAAGAGAGC------AGAGTCAGCGTCAGAAAATGAAGGGTTTGGAACctacaaactgggaaccacccaaagacagaaacaacacga---tgtaacgaggacaggcatcgtggtactgtatccataaactggaatactctttagcaattaaaaaggaaCCAAATCTGagct----gg-gtggtgggggggggggcacac i mm10.chr7 C 0 C 0 s canFam3.chr1 19634241 401 - 122678785 TCCCTCAGACCTGGGAGTCCTGATTCCCCAGCCCCTCCTCCCTCAGACCCAGGAA-------T----------------GGGGCC--AGCCTCAACCCCACCGCACCCCCAATTCTCTTCAGTGTCCACGCCCAGGGTTGCAAGGTGTGCAGGCCTTCCTTCGTCTTCTCCTTCATCCTCCGGAACTTCAGGGCGCAATTTGAGGCTCTGGAACCCGATCCCTGAGCCACTTGGTCC---CTGGTATGGCTCTTCCTGGTAGGGAAACATTCAGAGA--------CAGAATAGGAAGGACCTGGCAGCTCCC-AGTGGACACC-CCCAAGTGGAGAAACAACACAACAGCAGGAGCGGGAAGTAAATTGCAATA---TATCGATAACTCGGAATCCTCTACAGCAATAGGAAGAGACAC-------AGCT----AATGC-----ATAGAAGGCCAGGC i canFam3.chr1 I 8 I 1202 e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=159092.000000 s hg38.chr19_GL949753v2_alt 144681 186 + 796479 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa------------------------------------------------t----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt s panTro4.chr19 59078799 187 + 63644993 ctgtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaacatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaa-----------------------------------------------at----tagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgagaggctgaggcaggaaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721481 234 - 106955855 ctgtaatcccagcactttgggaggctgaggtgggtgaatcacctgaggtcag---------------gagttcgagaccagcctgaccaaaatggtgaaatcctgtctct----actaaaaataccaaaaaaaaaaaaaaaaaaacaaaaaaaaagctgggcctggtggcgggtgcctgtaatcccaaaa----aagctgggcctggtgg------------cgggtgcctgtaatcccagctacacgggaggctgaggcaagagaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60011912 177 + 64156825 ctgtaatccgagcactttcggaggccaaggtgggcggatcatctgaggccag---------------gggttcgagaccagcctgaccaacatggtgaaatcctccctc-------------tacaaaaaaaaaaaaaaat------------------------------------------------g----taactgggcctggtgg------------tggtcgcctgtaatcccagctactggggaggctgaggcaggaggatc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140796 190 + 51301725 ctgtaatcccagcactttgggaggccaaggtgggtggatcatctgaggtcag---------------gggttcgagaccagcctgaccaacatggtgaaatcctgcctct----actaaaaatacaaaaaaaaaaaaaaat------------------------------------------------atatttagctgggcctggtgg------------tgggcgcctgtaatcccagctactggggaggctgaggcaggagaatc i papAnu2.chr19 C 0 C 0 s mm10.chr7 3675760 233 + 145441459 ctttaatcccagcac-ttgggaggcagatgcaggtggatt-tctgaggccagcctggtctacagactgagttccaatacagccagagctacacagaaaaaccctgtctcgaaaaaccaaaaAAAAAAAAAAAAAAAAAAAGGAGCCAGACATAAAATAATGAT--------------------------G----GAGCCATGTCTAGTAGTATATgcatgcttgtatgcttgtaatcccaac----agtgaggttgaggcagtggaatt i mm10.chr7 C 0 C 0 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e chlSab2.chr6 46844259 58 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I a score=2100.000000 s hg38.chr19_GL949753v2_alt 144867 1 + 796479 g s panTro4.chr19 59078986 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721715 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012089 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140986 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844317 1 + 50890351 g i chlSab2.chr6 I 58 C 0 s mm10.chr7 3675993 1 + 145441459 g i mm10.chr7 C 0 I 558 e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=309972.000000 s hg38.chr19_GL949753v2_alt 144868 279 + 796479 cttgaacctgggaggtggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaacgttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtgggaggatcgcttgagcccaggtgtcggaggctgcagtgagctgagactgcacc s panTro4.chr19 59078987 279 + 63644993 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcattccagcctgggtgacggagtgagattccaagaaaggaaagaaagaaagaaaagaaagaaacctaatgctaggcagaagaagccagcacaaaagactgaagactgtatgattctatttgcacaaagttgcagagcac--agcttgcaaagctctacagaaaAGcaggaggctggagtaggaggatcgcttgagcctaggtgtcggaggctgcagtgagctgagactgcacc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102721716 266 - 106955855 cttgaacctgggaggcggaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagtgagattcc-------------aaggaagaaaagaaagaaaCCtaatgctaggcagaagatgccagcacaaaagactgaagactgtatgattctatttgcataaagttgcagagcac--agctagcaaagctctacagaaaAGcaggaggctggggtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcgcacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012090 278 + 64156825 cttgaacctgggagacagaggttgcagtgagctgagatggcaccattgcgctccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaaCCTAATGTCAGGCAGAAGAAAACAGCAGAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgtcggaggctgcagtgagctgagatcacacc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47140987 262 + 51301725 cttgaacctgggagacagaggttgcagtgagctgagattgcaccactgccctccagcctgggtgacagaatgagattccttctcag-aa---aaagaaagaaagaaggaaacctaatgccaggcagaag-aaacagcacaG-AGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAACACAGAGCTGGC-------------AAAGCAGGAGGCTGGagttggagaatcgcttgagcccaggtgtcagaggctgcagtgagctgagatcacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844318 278 + 50890351 cttgaacctgggagacagaggttgcagtgagctaagatggcaccattgcactccagcctgggtgacagaatgagattccttctcagaaa---aaagaaagaaagaaggaaGCCTAATGCTAGGCAGAAGAAAACAGCACAGAAGACTGAAGCCTGCATGATTCTATTTGTACAAAGTTGCAGAGCACAGAGCTGGCAAAGCTACACAGAAAAGcgggaggctggagtgggagaatcgcttgagcccaggtgttggaggctgcagtgagctgagatcacaca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55954731 804 + 60714840 M e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=46599.000000 s hg38.chr19_GL949753v2_alt 145147 23 + 796479 actgcactccagcctgggcatca s panTro4.chr19 59079266 23 + 63644993 actgcactccagcctgggcatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955535 23 + 60714840 actgcactccagcctgggcatca i ponAbe2.chr19 M 804 C 0 s nomLeu3.chr10 102721982 23 - 106955855 actgcactccagcctgggcatca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012368 23 + 64156825 actgcactccagcctgggcatca i rheMac3.chr19 C 0 I 319 s papAnu2.chr19 47141249 23 + 51301725 actgcactccagcctgggcatca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844596 23 + 50890351 actgcactccagcctgggcatca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=8024.000000 s hg38.chr19_GL949753v2_alt 145170 17 + 796479 gagcaagactctgtcaa s panTro4.chr19 59079289 17 + 63644993 gagtaagactctgtcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955558 17 + 60714840 gagcaagactctgccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722005 4 - 106955855 gagc------------- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47141272 17 + 51301725 cagcgagactctgtctc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46844619 17 + 50890351 cagcgagactctgtctc i chlSab2.chr6 C 0 I 1 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60012391 319 + 64156825 I a score=32557.000000 s hg38.chr19_GL949753v2_alt 145187 29 + 796479 aaaaaaaaaaaaaaa--------GGTTAGGGAGAAGA s panTro4.chr19 59079306 32 + 63644993 aaaaaaaaaaaaaaa-----aaaGGTTAGGGAGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955575 37 + 60714840 aaaaaaaaaaaaaaaaaaaaaaaGGTTAGGGAGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722009 19 - 106955855 ----------aaaaA--------GGTTAGGGAGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60012710 28 + 64156825 AAAAAAAAAAAAAAA--------GGTT-GGGGGAGAA i rheMac3.chr19 I 319 C 0 s papAnu2.chr19 47141290 28 + 51301725 aaaaaaaaaaaaaaa--------ggtt-gggggagAA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46844637 28 + 50890351 aaaaaaaaaaaaaaa--------GGTT-GGGGGAGAA i chlSab2.chr6 I 1 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45424788 1379 + 49145316 I e macFas5.chr19 55029692 9250 + 59248254 I a score=611756.000000 s hg38.chr19_GL949753v2_alt 145216 318 + 796479 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCACTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccatccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-gtTTGTTTTATT-TTATTTTAAttt-----ttatctgattttt-acagacaaatgtctcgttttgttgtccaggctggagtgc s panTro4.chr19 59079338 322 + 63644993 GGTTACCTTGTATTTGTGAGGAAAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCCGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGGATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatctgtagatgcccaaattccttatataaaatggta-agtatttgcgtacaggctatacacatcctcctgt-gtttgttttatt-ttattttattttattttTTATCTGAttttt-atagacaagtgtctcgttttgttgtccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955612 309 + 60714840 GGTTACCTTGTACTTGTGAGGAAAAAGCGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccccaagaatactgaaatatgtagatgcccaaatttcttatataaaacggtatagtatttgcatacaggctacacacatcctcctgt-Gtttattttatt-ttat-------------ttatctgattttt-atagac-agtgtctcattttgttgtccaggctggagtgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102722028 312 - 106955855 GGTTACCTTGTCCTTGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACACACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGCAGTTTATCTGGGCTCTCACTTTATGAATAcagccgtccctcagtatccat-gggggttggttcaaggactccctaagaatactgaaatctgtagatgcccaaattccttatataaaacggtacactatatgcatacaggctacacacatcctcctgt-gtttattttaTT-TTAATTT----------TTATCTGATTTTT-ATAGAC-AGTGTCTCGTTTTGTTGTCCAGACTGGTATGC i nomLeu3.chr10 C 0 M 1089 s rheMac3.chr19 60012738 318 + 64156825 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGCTTGCCCTAGCTGGAGTTTATCTGGGCTCTCACTTTATAAATAcagtcgtccctcagtatccat-gggagttggttcaaggactccccaaggataccgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatactcttctgtggttttttaaatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttgttgtccaggctggagtgc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141318 318 + 51301725 GGTTACCATCTCCTCGTGAGGAGAAAGGGGGTGTCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTGTCGcttgccctggctggagtttATCTGGGCTCTCACTTTATAAATACAGtcgtccctcagtatccat-gggggttGGTTCAAGGACTCCCCAAGGATACCGAAATCTGTA-ATGCCCaaattctgtatataaaatggcatagtatttgcatacaaGCTACACATATCCTTCTgtggtgttttaaatt-ttattttatttt-----ttatctgatttttcAGAGAC-AGCGTCttgttttgttgtccaggctggagtgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844665 318 + 50890351 GGTTACAATCTCCTCGTGAGGAGAAAGGGGGTATCAGGGGAGGGACGCACAGGGTGCTGTCATGCTGTATCGCTTGCCCTAGCTGGAGTTTATCTGGGCTTTCACTTTATAAATAcagttgtccctcagtatccat-gggggttggttcaaggactccccaaggatactgaaatctgta-atatccaaattctgtatataaaatggcatagtatttgcatacaggctacacatatccttctgtggttttttccatt-ttattttatttt-----ttatctgatttttcagagac-agcgtctcgttttggtgtccaggctggagtgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426167 300 + 49145316 GGTTACCTTGTCCTTGTGAGGAT-GAGGGGACATCAGAGGATGGGCATGCAAGGTGCTGTCACGCCGTGT--CCTGCCCTAGCTGGAGTTTACCTGGGTTCTCATTTTATGAATGcacttgtacctcattatccatggggggttagttcacgatctccc-aagaatactgaaatctgta-atgcccaaattccttatgtaaaacagtacagtattggcatctgcaatacacacatcctcctgt-atTATTACCATTATTAT-------------TAGTAgtattttttaaagac-agggtttcatgatgttggtcaggct------- i calJac3.chr22 I 1379 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e macFas5.chr19 55029692 9250 + 59248254 I a score=154766.000000 s hg38.chr19_GL949753v2_alt 145534 110 + 796479 ggtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccacgacacccagcc s panTro4.chr19 59079660 110 + 63644993 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55955921 110 + 60714840 agtggtgcaatcatagctcaatgcagcctcaaacttccaggctcaagcaattctcccgcctcagcctcccaaagcgctggggctacaggtatgggccactacactcagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013056 110 + 64156825 agtggtgcagtcgtagctcaatgcagcctcaaatttctgggctccagcaattctcctgcctcagtctcccaaagtgctggggctacaggtgtgggccactacacccagag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141636 110 + 51301725 agtggtgcagtcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctcccaaagtgctggggctacaggtgtgggccactacaCCCAGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46844983 110 + 50890351 agtggtgcaatcatagctcaatgcagcctcaaatttccaggctccagcaattctcccgcctcagtctccccaagtgctggggctacaggtgtgggcccctacacccagcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45426467 85 + 49145316 ---------------gct---------cttgagctctagacctcaggtgatccacccgccttggcct-ctaaagggcttggattacaggcgtgagccaccacgcccggtc i calJac3.chr22 C 0 I 949 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=131476.000000 s hg38.chr19_GL949753v2_alt 145644 111 + 796479 ctccaatgcactttaaatcacctctagattacttataacacccggtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT s panTro4.chr19 59079770 111 + 63644993 ctccaatgcactttaaatcacctctagattacttataacaccttgtacaaggtaaatgttatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956031 111 + 60714840 ctccaatgcactttaaatcatctctagattacttataacaccttgtacaaggtaaacattatatagatagctgttcttttaacttgtattatttTTTGTCATATTGTTACT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013166 108 + 64156825 ctccaatgcactttcaatcacctctagattacttacaatacctcatacaagat-aatgttatatagatagctgttCTTTTAatttgtat--ttttttgtcatattgttact i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47141746 108 + 51301725 CTCCAATGCACTTTcaatcacctctagattacttacaatacctcaTACAAGAT-AATGTTATATAGATAGCtgttcttttaatttgtat--ttttttgtcatattgttact i papAnu2.chr19 C 0 I 328 s chlSab2.chr6 46845093 109 + 50890351 ctccagtgcactttcaatcacctctagattacttacaatacctcatacaagataaatgttagatagatagctgttCTTTTAATTTGTAT--ttttttgtcatattgttact i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=90.000000 s hg38.chr19_GL949753v2_alt 145755 1 + 796479 T s panTro4.chr19 59079881 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956142 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013274 1 + 64156825 t i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46845202 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e papAnu2.chr19 47141854 328 + 51301725 I e macFas5.chr19 55029692 9250 + 59248254 I a score=1365.000000 s hg38.chr19_GL949753v2_alt 145756 1 + 796479 T s panTro4.chr19 59079882 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956143 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60013275 1 + 64156825 t i rheMac3.chr19 C 0 I 486 s papAnu2.chr19 47142182 1 + 51301725 t i papAnu2.chr19 I 328 C 0 s chlSab2.chr6 46845203 1 + 50890351 t i chlSab2.chr6 C 0 I 489 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=57492.000000 s hg38.chr19_GL949753v2_alt 145757 119 + 796479 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggccgcagtatagtggctatattcacaggcatgatcccactactgatcggcgtgggagtgttgaTACATTG s panTro4.chr19 59079883 119 + 63644993 GATTATTACTTTTAAAAAATagagatgggggtctcgctatgttactcaggctgcagtatagtggctatattcacaggcatgaacccgctactgatcagcatgggagtgttgaTACATTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55956144 119 + 60714840 GATTATTACTTTTAAAAAATagagatgggggtcttgctatgttgctcaggctgcagtatagtggctatattcgcaggcatgatcccgctactgatcggcacgggagtgttgaTATATTG i ponAbe2.chr19 C 0 M 1290 s papAnu2.chr19 47142183 118 + 51301725 gattattacttttaaaagatacagat-ggggtctcgatatgttgctcaggctggagtatagtggctatATTCACAGGCACGATCCCGCCACTGATCAGCAGGGGAGTGGTGatatattg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7143.000000 s hg38.chr19_GL949753v2_alt 145876 120 + 796479 TTATTTTTTATTGTTTTTT-Ccatatatatacacatatatataca--------------tatatatgtgtatatatatacacacatatgcatatatatacgcatatatgcgtatatatatacgcgtatatacgcg s panTro4.chr19 59080002 135 + 63644993 TTATTTTTTATTGTTTTTTTCcatatgtatacacatatatatacacacatatatatgtatatatatgtgtgtgtatatacacatatatgtgtatatatacgtatatatgcatatatatacacgtatatatgtgtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47142301 37 + 51301725 ttgttttttattgtttttt-ccatatatatac---------------------------tatata---------------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e chlSab2.chr6 46845204 489 + 50890351 I e macFas5.chr19 55029692 9250 + 59248254 I e rheMac3.chr19 60013276 486 + 64156825 I a score=7816.000000 s hg38.chr19_GL949753v2_alt 145996 10 + 796479 tatatatata s panTro4.chr19 59080137 10 + 63644993 tatatatata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013762 10 + 64156825 TATAtttata i rheMac3.chr19 I 486 C 0 s papAnu2.chr19 47142338 10 + 51301725 tatatttata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845693 10 + 50890351 tatatttata i chlSab2.chr6 I 489 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45426552 949 + 49145316 I e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=337548.000000 s hg38.chr19_GL949753v2_alt 146006 290 + 796479 tttgagatggagtcccgctctatcacccaggccggagtccaatggcacgatcttggctcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggttttgccatgttggccaggctggtcttgaactcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcAATGGGCCCAtaa s panTro4.chr19 59080147 290 + 63644993 tttgagatggagtcccgctctatcacccaggccggagtgcaatggcacgatcttggttcactgcaacctctatctccctggttcaagcgattctcctgcttcagcctcccgagtagctgggattacaggcacccgccaccacacccagctaatg--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgacctcctgaccacaggtgatccactcgcctgggcctcccaaagtgctgggattacaggtgtgagccactgcaacgggccCAtaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60013772 290 + 64156825 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgcatctctgtggttcaagcaattctcctgcctcagcctaccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgccgggccCACaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142348 290 + 51301725 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatattggctcactgcaacctgtatcTCTgtggttaaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacatgccaccacacccagctaatt--tttgtatttttagtagagttggggtttcgccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgcctcggcctcctaaagtgctgggattacaggtgtgagccactgcgccgggcccaCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845703 290 + 50890351 tttgagatggagtcccgctctatcacccaggctggagtgcaatggcacgatctcggctcactgtgacctgtatgtccgtggttcaagccattctcctgcctcagcctcccgagtagctgggattacaggcacatgctaccacatgcagctaatt--tttgtatttttagtagagttggggtttcgccatgttcgccaggctggtctcgaactcctgacctcaggtgatccattcgcctcggcctcctaaagtgctgggattacaggtgtgagccaccgcgctgggccCACaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427501 292 + 49145316 ttagagacagagtctaattttgttgcctaggctggagtgcaatggagcaatctctgctcactgtgacctccgcctcccaggttcaagggattctccttcctcagcctcccgagtagctgggactacaggtgtgcgccaccacacccggctaatttatttgtatttttagcagagaaggagtttcaccatgttagccaggatgggctcgagctcctgagctcaggtgatccacttgccttgccctcccaaagtgctaacattgcaggcaggagccaccgcgccaggccCATAA i calJac3.chr22 I 949 C 0 e mm10.chr7 3675994 558 + 145441459 I e canFam3.chr1 19634642 1202 - 122678785 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=216340.000000 s hg38.chr19_GL949753v2_alt 146296 199 + 796479 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGgacacacacacagagagaaactgag--gcagagacagG s panTro4.chr19 59080437 199 + 63644993 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcaaattatgcagTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTGGAAGAGGAGGCAAAGATGAAGGAAGGTATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGGACACACACACACAGAGAAACTGAG--GCAGAGACAGG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014062 193 + 64156825 tcatttttgaaggagggcacctgcattttcattgttcaccaggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACGTAAAGCAGAG------AAATATTA-ACAGATTTTGG--ACACACACAGAGAAAAACTGAGAGGCAGAGACAGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142638 197 + 51301725 TCATTTTTGAAGGAGGGCACCTGCATTTTCATTGTTCACCAGGCCCTGCGAATTATACCGTGagaatgggaaaagaaagaagttaaagtGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAagcagagagaaataaatatta-acagattttgg----acacacagagaaaaactgagaggcagagacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46845993 199 + 50890351 tcatttttgaaggagggcacctgcattttcattgttcaccgggccctgcgaattatACCGTGAGAATGGGAAAAGAAAGAAGTTAAAGAGAGGGAGGCTTTGAAGAGGAGGCAAAGATGAAGGAAGACATAAAGCAGAGAGAAATAAATATTA-ACAGATTTTGG--ACACATGCAGAGAAAAACTGAGAAGCAGAGACAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427793 173 + 49145316 TCATTTTTGAATGAGGACACCTGCATTCTCATTGTTCACCAGGTGCTGCAAAGCAGGCAGTGGG--------------------AAAGAGAGAGCGGCTTTGAAGAAGTGGGGAAGGTGAAGG----CATAAAGCAGAGACAAATAAATA--A-GCAGATTTCAG--ACATGCACAGGGAGAAACTGAGAAGCAGAGGCAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19635844 158 - 122678785 TCAGTCTTGCCGGAGCTGTCCAGAATGTTCGTTGTTCAGCA-GCCGTGCACATCTTGT----AGCCCGGGAAGGGAAAGAAG--GAAGAGGGACAAACTTCGGAAAACA---------GAAGG-----CCACAACAG--------AAACACTACACAGATTCCAG------GCACAGGGAGAAG--GAG--CCAGAG----- i canFam3.chr1 I 1202 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102722340 1089 - 106955855 M e macFas5.chr19 55029692 9250 + 59248254 I a score=399714.000000 s hg38.chr19_GL949753v2_alt 146495 242 + 796479 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----TCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAGGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCTG s panTro4.chr19 59080636 242 + 63644993 ATTGGTGGAGACCAGGGAGATGG----CAAATCCCAGAGA----GAAGAGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGAGTCCAAGGTATGGGAGAAGGGCCCGGTCCGGGCTGTGCGGGTCCCAGCGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723443 242 - 106955855 ATTGGTGGAGACCAGGGAGACGG----CAAATCCCAGAGA----GAAGGGA-CCCCAGAGCCA-----CCGAAAGGCAGCACTCACCTGGAGTC--CGAAGTAGAGACAAAGATGAGGAGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGGGGCAGAGAGAGGCCCCAGAAGCCAGGAGCAGCAGAGGACAGAGGGAGGAGACTGTGTCCAAGGTATGGGAGAAGGGCCCAGTCCGGGCTGTGCGGGTCCCAGCTG i nomLeu3.chr10 M 1089 C 0 s rheMac3.chr19 60014255 244 + 64156825 ATTGGAGGAGACCAGGGAGATGG----CGAATCCCAGAGACAGGGAAGAGA-TCCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC--GGGAAAAAAAGAAACCAAGAGAGGCAGCTCTGAGTGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGAGGGAGGAGACCGCGTCCAAGGTATGGGAGAAGCGCCTGGTCCAGGCTGTGCGGGTCCCAGCCG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47142835 246 + 51301725 attgGAGGAGACCAGGGGGACGG----CGAATcccagagacagagaagaga-tcCCGGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGacgaggggaaaaaagaaaccaagagagGCAGCTCTGAGCGAGGCAGAGAGAGGCCCCAGCAGCCAGGAGCGGCAGAGGACAGACGGAGGAGACCGCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCGGGTCCCAGCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846192 245 + 50890351 ATTGGAGGAGACCAGGGAGACGG----CGAATCCCAGAGACAGCGAAGAGA-TCCCAGAGCCA-----CGGAAAGGCAGCACTCACCTGGAGTC--CGAAGGAGAGACAAAGAC-AGGGGAAAAAAGAAACCAAGAGAGGCAGCTCTGAGCGAAGCAGAGAGAGGCCCCAGAAGCCAGAAGCGGCAGAGGACAGAGGGAGGAGACCTCGTCCAAGGTATGGGAGAAGGGCCCGGTCCAGGCTGTGCAGGTCCCAGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45427966 241 + 49145316 ACTGGA-GAGACATGGGTGACAG----TGAATCCCAGAGA----GAGAGGA-CCCCAGAGTCA-----CCGAAAGGAAGTACTCATTCGGAATC--TGAAGCAGAGACAAAGATGAGGGGAAGAAAGAAACCAAGAGGGGCAGCTCTGTCCGGGGCAGACAGAGGCCCCAGAAACCAGGAGCCGCAGAGAACAGAGGGAAGAGACAGGGTCCGAGGTGTGGGAGAAGCGCACAACCTGGGCTGGATGGGTCCCAGCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636002 166 - 122678785 ------------CAGAGAGCCAGCACACGAACCCGGGCGA----CAGGAGAGTTCTGGAGCCAGGAGCCAGGGAGGCAGGAGGC-CTgggagtcagagaagcagagacacaggcacagggaaagaagg---caagagaagca-----gggagaggctgagggagg-----------------aggagaggACACACGCTGG--------------------------------------------------CAAGCCG i canFam3.chr1 C 0 C 0 e mm10.chr7 3675994 558 + 145441459 I e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=329303.000000 s hg38.chr19_GL949753v2_alt 146737 126 + 796479 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc s panTro4.chr19 59080878 126 + 63644993 GAGGTGGAGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGCTCCTTCCTCCAT---CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723685 126 - 106955855 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGACTTCTGTGAAGGCCTTTctgctccttcctccat---cc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014499 126 + 64156825 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGCCTGGGTGACTTCGGTGAAGGCCTTTCTGCTCCTTCCTCCAG---CC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143081 129 + 51301725 TAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCCTTTCTGctccttcctccagcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846437 129 + 50890351 GAGGTGGGGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCCGTCTGGGTGACTTCTGTGAAGGCTTTTctgctccttcctccagcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45428207 126 + 49145316 GAGGTGGCGCCTCACCTGTGTGCCCGTCTGGCCTGCATGGGCCAGGGCAGTTCCCGGGAAGGGTGAGGGTCCTGCAGCTCTGTCTGGGTGGCTTCTGCAAAGGCCTGCCTGCTCCTTCCTCCAT---CC i calJac3.chr22 C 0 M 1419 s mm10.chr7 3676552 113 + 145441459 GAGGTG----CTCACCTGTGTGCCCGCCTTGCCTGCATAGGCCAGGGAAGTTCCCGGGAAGGGTGAG---------ATTCCATTTGTGCAGTTTCTGCAAAGGCCTGAAGGCTCCTTCCTCCTT---CA i mm10.chr7 I 558 C 0 s canFam3.chr1 19636168 125 - 122678785 -GAGCGGAGCCTCACCTGTGTGTCCGGCGGGCCTGCATGGGCCATGGCAGCTCCCGGGAGGGGACGGGCTCCTCCAGCTCCTGCTGGGCGGCTTCTGCCATGGTCTGGAGTCTCCTCTCTCCAT---CT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e macFas5.chr19 55029692 9250 + 59248254 I a score=272175.000000 s hg38.chr19_GL949753v2_alt 146863 127 + 796479 tcctcctcctcct---ccAGCGCCCCCCAAGGCAGCACCCCAGGGTCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAAGACAGCGATGGGCCTGGGGAGGA-GCAG--GGGGCTGGGA s panTro4.chr19 59081004 127 + 63644993 TCCTCCTCCTCCT---CCAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723811 130 - 106955855 tcctcctcctcctccgccAGCGCCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTCGGCAGCTCGTTCAGCACAGAGGACAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014625 127 + 64156825 TCCTCCTCCTCCT---CCGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGATAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47143210 127 + 51301725 tcctcctcctcct---ccggcACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGACAGCGAtgggcctggggaggg-gcag--ggggctGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846566 127 + 50890351 tcctcctcctcct---ccGGCACCCCCCAAGGCAGCACCCCAGGGCCTCGGTACCGAAGGGTGGCAGCACTGGGCAGCTCGTTCAGCACAGAGGTCAGCGATGGGCCTGGGGAGGG-GCAG--GGGGCTGGGA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676665 127 + 145441459 TCATCATCTTCAT---CCAGTGTTCCCCAAGGGAGCACACCAGGGCCGCGGTATCGCAGCGTAGCAGCGCTGGGGAGATCGTTCAGCACAGACGCCAGCGATGGGCCTGGGATGAACACAA--AGGATTGAA- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636293 129 - 122678785 TCTTCCTCCTCCT---CCGATGCCCCCCACGGAAGAACCCCAGGGCCCCGGTACCGAAGGGTTGCAGCACTGGGGAGCTCATTCAGCACAGAGGAGAGCGATGGGCCTGGGGTGGA-AAAGAAGGGGCTGGGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M e macFas5.chr19 55029692 9250 + 59248254 I a score=112897.000000 s hg38.chr19_GL949753v2_alt 146990 63 + 796479 ----------------------------agacccgggagtctggg-ccctaattcctcctccctcaga-ccaggaaaccagg-tccccggcccc s panTro4.chr19 59081131 63 + 63644993 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccccggcccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723941 56 - 106955855 ----------------------------agacctgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cccc------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60014752 62 + 64156825 ----------------------------agacccgggagtctggg-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcag-tccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55038942 65 + 59248254 ----------------------------agacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagacccccag-cccc i macFas5.chr19 I 9250 C 0 s papAnu2.chr19 47143337 63 + 51301725 ----------------------------AGACCTGGGAGTCTGGG-CCCAaattcctcctccctcaga-ctaGGAAACCAGG-CCTcagtcccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846693 63 + 50890351 ----------------------------AGACCCGGGAGTCTGGG-cccaaattcctcctccctcaga-ccaggaaaccagg-cctcagtcccc i chlSab2.chr6 C 0 C 0 s mm10.chr7 3676792 58 + 145441459 ----------------------------AGACAGAGGAGTCCAGG-CCACAAGCCTTTC-CCCTCAGA-TCCACAGTCCAGG-CCACAGC---- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636422 89 - 122678785 GGGCGCGGGAGTCCCAGCCTCCTCCCTCAGACC-AGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGCCCAGG-CCCCTGCTCC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e calJac3.chr22 45428333 1419 + 49145316 M a score=117337.000000 s hg38.chr19_GL949753v2_alt 147053 52 + 796479 tcctccctcagacccaggagtccaggcccccggc----tcctcctccctcagaccc s panTro4.chr19 59081194 52 + 63644993 tcctccctcagacccaggagtctaggcccccgac----ccctcctccctcagaccc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60014814 51 + 64156825 tcctccctcagacccaggagtccaggcctccag-----ccctcctccctcagaccc i rheMac3.chr19 C 0 I 637 s macFas5.chr19 55039007 52 + 59248254 tcctccctcagacccaggagtccagacccccagc----ccctcctccctcagaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143400 55 + 51301725 tcctccctcagacccaggagtccaggcc-ccagcccttccctcttccctcagaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846756 52 + 50890351 tcctccctcagacccaggagtccaggcccccggc----ccctcctccctcggaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429752 51 + 49145316 tcctccctcaga-ccagaaaaccaggccccaggc----ccctcctccctcggaccc i calJac3.chr22 M 1419 C 0 s mm10.chr7 3676850 50 + 145441459 CCATCTCTCAGACACAAGGGTGCAGGGTTCAGGC------CACCTCCCTCAGACCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19636511 49 - 122678785 TCCTCCCTCAGA-CCAGGAGTCCAGGCC-CCTGC----TCCTCCTCCCTCAGACC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e nomLeu3.chr10 102723997 0 - 106955855 C a score=89712.000000 s hg38.chr19_GL949753v2_alt 147105 42 + 796479 aggagtccaggcccccggctcctcctccctcagacccaggag s panTro4.chr19 59081246 42 + 63644993 agaagtccaggctctcggcccctcctccctcagacccagcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102723997 27 - 106955855 ---------------cggcccctcctccctcagacccaggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039059 41 + 59248254 aggagtccagg-ccccggcccctcctccctcagacccaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143455 41 + 51301725 aggagtccaga-ccccagcccctcctccctcagacccaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46846808 42 + 50890351 aggagtccaggcccccggcccctcctccctcggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429803 41 + 49145316 aggagtccagg-ccccagcccctcctctctcggacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3676900 38 + 145441459 -TGGAGCCAGG-CCCCAG--ACTCTTTTTTCAGACCCAGGAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636560 41 - 122678785 AGGACTCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e rheMac3.chr19 60014865 637 + 64156825 I a score=14022.000000 s hg38.chr19_GL949753v2_alt 147147 15 + 796479 tccaggcccccggct s panTro4.chr19 59081288 15 + 63644993 aacaggcccccggcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102724024 15 - 106955855 tccaggcccccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039100 15 + 59248254 tccagatccccagac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846850 15 + 50890351 tccaggcccccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429844 14 + 49145316 tccaggccccagcc- i calJac3.chr22 C 0 C 0 s mm10.chr7 3676938 12 + 145441459 CCCATGCCCCAA--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636601 14 - 122678785 TCCAGGCCCCTGCT- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55956263 1290 + 60714840 M e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=73582.000000 s hg38.chr19_GL949753v2_alt 147162 28 + 796479 cctcctccctcagacccaggagaacagg s panTro4.chr19 59081303 28 + 63644993 cctcctccctcagacccagaagtccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957553 27 + 60714840 cctcctccctcaga-ccaggaaaccagg i ponAbe2.chr19 M 1290 C 0 s nomLeu3.chr10 102724039 28 - 106955855 cctcctccctcagacccaggagtccagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55039115 28 + 59248254 cctcctccctcagacccaggagtccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846865 28 + 50890351 cctcctccctcggacccaggagtccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45429858 28 + 49145316 cctcctccctcggacccaggagtccaga i calJac3.chr22 C 0 C 0 s mm10.chr7 3676950 25 + 145441459 ---CCTTCTTCAGATACAGGGGTCTAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19636615 28 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C e rheMac3.chr19 60014865 637 + 64156825 I a score=40086.000000 s hg38.chr19_GL949753v2_alt 147190 14 + 796479 cccccggcccctcc s panTro4.chr19 59081331 14 + 63644993 ctctcggcccctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957580 14 + 60714840 ccccagagccctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724067 14 - 106955855 cccccggcccctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015502 14 + 64156825 cccccggcccctcc i rheMac3.chr19 I 637 C 0 s macFas5.chr19 55039143 14 + 59248254 cccccagcccctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46846893 14 + 50890351 cccccggcccctcc i chlSab2.chr6 C 0 I 1683 s calJac3.chr22 45429886 14 + 49145316 cccccggcccctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676975 12 + 145441459 -CCCCAGCCCATT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636643 13 - 122678785 -CCCCTGCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=414808.000000 s hg38.chr19_GL949753v2_alt 147204 151 + 796479 tccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-ctcctcctccctcagacccaggagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggctcctcctcc s panTro4.chr19 59081345 151 + 63644993 tccctgagacccagcagaacaggcccccggcccctcctccctcagacccagaagtccaggctctcgg-cccctcctccctcagacccagcagaacaggcccccggcccctcctccctcagacccaggagtccaggcccccggcccctcctcc i panTro4.chr19 C 0 I 478 s ponAbe2.chr19 55957594 150 + 60714840 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccaggccctcagctcctcctccctcagacccaggagtccagg-ccccagcccctccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724081 151 - 106955855 tccctcagacccatgagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccggccccctcctccctcagacccaggagtccaggctcccggcccctcctccctcaga-ccaggaaaccaggttcccggcccctcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015516 150 + 64156825 tccctcagacccaggagtccaggcccccggcccctcctccctcagacccaggagtccaggcccccgg-cccctcctccctcagacccaggagtccagt-ccccggcccctcctccctcagacccgggagtccaggtacccagcccctcctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039157 150 + 59248254 tccctcagacccaggagtccaggcccccagcccctcctccctcagacccaggagtccagatccccag-accctcctccctcagacccaggagtccagg-ccccggcccctcctccctcagacccgggagtccaggtacccagctcctcctcc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848590 151 + 50890351 tccctcggccccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccgg-cccctcctccctcggacccaggagtccaggcccccggcccctcctccctcggacccaggagtccaggcccccggctcctcctcc i chlSab2.chr6 I 1683 C 0 s calJac3.chr22 45429900 146 + 49145316 tccctcagacccaggagttcagg--gacagcccctcctcccccagccccaggagtccagacccccgg-cccctcctccctcagacccaggagttcagg--cacagcccctcctccctgggacccaggagtccagg-ccccaggccctcctcc i calJac3.chr22 C 0 C 0 s mm10.chr7 3676987 106 + 145441459 TCTCTCAGACCCAGGGGTACAGGCCTAAAGCCA--CCCCCCTCAGACCCAGGAGTTCAGA--CTCGG-GTTCTC--CCCTCAGATCCAGGGCTATAGA--------------------------------------TCCCATTATTTCTCC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636656 144 - 122678785 TCCCTCAGA-CCAGGAGTCCAGGCCCCCAGCCCCTC--CCCTCAGACGCAGGAGTCCAGGCCCCTG--CTCCTCCTCCCTCAGACCCAGGAGTCCAGG-CCCCTGCTCCTCCTCCCTCAGA-CCAGGAGTCCAGG-CCCCTGCTCCTCCTCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=31645.000000 s hg38.chr19_GL949753v2_alt 147355 14 + 796479 ctcagacataggaa s panTro4.chr19 59081974 14 + 63644993 ctcagacataggaa i panTro4.chr19 I 478 C 0 s ponAbe2.chr19 55957744 14 + 60714840 ctcagacataggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724232 14 - 106955855 ctcagacccagtag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015666 14 + 64156825 ctcagagccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039307 14 + 59248254 ctcagacccgggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46848741 14 + 50890351 cttggacccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430046 14 + 49145316 ctcagacccaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3677093 12 + 145441459 TTCACACTGGGG-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19636800 14 - 122678785 CTCAGACCCAGGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47143496 0 + 51301725 C a score=35449.000000 s hg38.chr19_GL949753v2_alt 147369 15 + 796479 tccaggcacccagcc s panTro4.chr19 59081988 15 + 63644993 tccaggcacccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957758 15 + 60714840 tccaggcacgcagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724246 14 - 106955855 tccagac-cccagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015680 15 + 64156825 tccaggtacccagct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039321 15 + 59248254 tccaggtacccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143496 14 + 51301725 tccaggc-ctcagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848755 14 + 50890351 tccaggc-cccggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430060 13 + 49145316 ttcagg--cacagcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19636814 15 - 122678785 CTCAGGCCCCCAGCC i canFam3.chr1 C 0 I 878 e mm10.chr7 3677105 0 + 145441459 C a score=6465713.000000 s hg38.chr19_GL949753v2_alt 147384 1864 + 796479 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccatccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCATTC---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCC-AGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGG---CTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACAGGATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GTCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCACccgcacctcagtttcccctttgtgaaatgggaaGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGCGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCTGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGGGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- s panTro4.chr19 59082003 1866 + 63644993 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtccgggtgccagcctctacttcccctggacccaggggtccacagccctcaactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTGGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTGCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGGGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCCCAGGTA----AGGGAGGGGCCAGGG-CAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCCCG---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCGGGGGGGGGGCTGTACCTCACCCT------------------------GGGACTTGGTGGA-CTAAGTCCTTCCCACCGTTTATCA-CC--CAGATACCTGCACGGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACACGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGCGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCTCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGCG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55957773 1905 + 60714840 cctcctccctcaga-ccaggaaaccaggttcccagcccctcctccctcaggcccaggagtcccggtgccagcctctacttcccctggacccaggggtccacagccctcgactccgtccccAAG-----------------CGTGGAACCCTCCTACTCCAGGGCAGTGGAGTCCAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACTCAGCCTCTCCTATTCCCCAGACACCCAAACTCCCAGCCCTTAGCCCTCCCCTCCTCCCAGACTAAACTCCCAGCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCCCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTTAGCCCTG-AGACTCAGGAGGCCGGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCTTGAAGATCGGATGGATCTGAGCTTCTCCTGACAT-C---CTTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTAGGGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCAGGGCT------GTCTCTAGTGGCTA-CCAGGCGGACACTGCCCCAGGTA----AGGGAGGGGCCGGGG-CAGGTGTGTACCTGGCCGACAGGTGGCCCGG---AGGGAGTAAGGTACG---CTTCCTGTGGTTTCTCAGGGCCTCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGCTGCCCTG---GGCCTAACAGTTTGGCTCCTGG--GCTGAGCGGGGCAGGGGCTGTACCTCACCCT------------------------GGGACTTCGTGGGCCTAAGTCCTTCCCGCCGTTTATCCTCC--CAGATACCTGCACGGACACGCCGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCACAGGCCGAGCAATGAAAAGAGGGTGCCAGGAGCGCTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACAGCCGTCCCCAGGCCTGCGCATTCGCACCTCAGTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATTGGTGCGATGAGCTAAAAGTGGAGTGAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCAACCCCACATTGTGGATGCAAAGAAAGGGGATTTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCGCTGGATACCCAGAAGCTGGAGCAGGGGCCAGTGA---CTCTTGTCTGGA---CAATACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGGGTATTT--AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAACCTGGTTCACAGAATTCCCAGG------------------A-----CCAGCTGGCAGAGGGGGCGTCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCTAAAGCCAGCCCCAGCCCCAGGGCTGCCAGAGCTAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGTCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCTCTCAGCAGCCAGGCACAGCGGGATCGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCGCTCAGCAGCATGGTCCAGGTGCTCCT-GAGGAGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102724260 1860 - 106955855 cctcctccctcagacccaggagtccaggcccctggcccctcctccctcaggcccaggagtctgggtgccagcctctacttcccctggacccaggG--TCACAGCCCTCGACTCTGTCCCCAAG-----------------CGTGGAACC--TCTACTCCAGGGCAGTGGAGT-CAGGCTTCAACTTCCTTTTCCCTCTAGCTCAGGAGTGTGGGAACCCAGCCTCTCCTATTCCCGAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTGAGACCCTGGAGTTCCAGCCTGCAGTTCCCTTCTCCCCCATAATATCAGGAAGTGGAACCTTCTCTCTTCAGGCCTC-AGACTCAGGAGGCCAGGCCTCCCCTTTCCTCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCTGGCGGGCCAGCCACCCCCTAGAGGAGCCCCAGGCTTCTGATTCCAAGGTCGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTCTCTAGTGGCCA-CCAGGCAGACACTGCCTCAGGTA----AGGGAGGGGCCGGGGACAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTGGTTTCTCAGGGCCGCTGATGCGAAAGGTCTCCTGGGAGCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCTGGGCTGGGGAG---CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CTAAGTCCTTCCCGCCGTTTATCA-CC--CAGATACCTGCACAGACACGATGCCTTTGTGCAACACTTTATTGGGAAGGATTTACACATGGTGA-CCTGTCATAGGCCAAGCGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGGTGGAAGCCAT----AGGACGGCCGTCCCCAGGCCCGCGCATCCGCACCT--GTTTCCCCTTTGTGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGTTGTGATGAGCTAAAAGTGGAGCGAAAACCACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CCGACCCCACATTGTGGATGCAGAGAAAGGGAA-TTGCCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTGTGGATAGCCAGAAGCTGGAGCAGTCGCCAGTGA-GGCTCTTGTCTGGA---CAATACTTTGATTTTGCAGGAGTGGA---------G---GT-------GGCCCCTGGGC---------------AGAAGG------CAGGGAGGACACCCCCGGGTCTGCTGC-AGTTGAAGGCAGGGTATTTAGAGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CTAGCTGGCAGAGGGAGCATCGTGAC---AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCAGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCAGCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGGCGGCCCTCAGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCTGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GGGGAGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60015695 1842 + 64156825 cctcctcccttgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTGTCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55039336 1842 + 59248254 cctcctccctcgga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtcggggtgccagtctctactttccctggatccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTTCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCATCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACC------------CCTTCAGTTCCTTTTCCCCCCATAATATCAGGAAGTGGAACCT--TCTCTTCAGCCCTC-AGACTCAGCAGGCCAGGCGTCCCCTT---TCCTCCAGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC-------------------------GGACTTTGTGGC-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACGTGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcacctcagtttcccctttgtgaaatgggaaacttatgcttccttccaagtctgcaatatcggtgccatgagctaaaagtggagcgAAAGACACAAGGAAGAAG-------CTTCCCATTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGCGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCACGA-GACTCTTGTCCGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47143510 1835 + 51301725 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggAGTCCGAGTGCCAGTCTCTACTTTCCCTGAACCCAGGGGCCCACAGTCCTCAACTCCATCCCCAGG-----------------CGTGGACCCCTCATACTCCAGGACA---GAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCCTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTCAGTTCCTTTCTCCCCC---ATATCAGGAAGTGGAACCT--TCTCTTTAGCCCTT-AGACTTAGGAGG----------CCTT---TCCTCCCGCAGGACTCCCACCTAGCCTGAAGGTCGGATGGATCTGAGCTTCTCCTGGCAT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCCCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGTGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGTAGGTGGCCCGG---AGGGAGTAAGGTATA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGCGAAAGGTGTCCTGGGAACTGAAGTCCCTCTGGTGCCCCA---GGCCTGACGGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCC------------------------GGGACTTCGTGGT-CTAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAGGGATGAGAAGAGGGTGCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGATGGCCGTCCCCAGGCCCACGCATCtacacctcagtttcccctttgtGAAATGGGAAGCTTATGCTTCCTTCCAAGTCTGCAATATCGGTGCAATGAGCTAAAAGTGGAGCGAAAGACAC----AAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----CGTTTTGGGGAAGTGCAGTGCTCTCTGGGCACCCAGAAGCTGGAGCAGGGGCCCACCA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------GGAGGG------CAGGGAGGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGATAAAGACTCTTTCTGGG--GAGGAGAC------------------------------AGCGGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGCGTCATGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAaagccagccccagccccagggctgCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGTACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGTCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTcct-gaggagg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46848769 1855 + 50890351 cctcctccctcaga-ccaggaaaccaggtccccagcccctcctccctcaggcccaggagtccgggtgccagtctgtactctccctggacccaggggcccacagtcctcaactccatccccAGG-----------------CGCGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGTCCTCAACTTCCTTTTCCTTCTAGCTCAGAAGTGTGGGAACCCAGCCTCTCCTATTCCCAAGACACCCAAACTCCCA-------------------------------------GCCTTTAGCCCTCCCCTCC----TTCCAGACTAGCCTGGTTCTCTAGGCTTCTCCTCCTCAGACCCCAGAGTTTCAGCCTTGAGTTCCTTTCTCCCCCATAATATCAGGAAGTGGAACCT--TCTATTTAGCCCTC-AGACTCTGCAGGCCAGGCCTCCCCTT---TCCTCCAGCAGGACTCCCCCCTAGCCTGAAGGCCAGATGGATCCGAGCTTCTCCTGGCAT-C---CCTACCGCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTGGAGGAGCCCCAGGCTTCTGATTCCAAGGTTGGGTTTT-CTTCCATGGCCCCAGGCTGGGCT------GTTTCTAGCGGCCA-CCAGGCAAACACTGCCCCAGGTA----AGGGAGGGGCCCGGGGCAGGTGTGTACCTGGCCAGCAGGTGGCCCGG---AGGGAGTAAGGTACA---CTTCCTGTAGTTTCTCAGGGCCGCTGATGTGAAAGGTCTCCTGGGAGCTGAAGTCCCTCTGGTGCCCCA---GGCCTGACAGTTTGGTTCCTGG--GCTGGGCAG--------CTGTACCTCACCCT------------------------GGGACTTCGTGGC-CAAAGTCCTTCCTGCCGTTTATCA-CC--CAGATACCTGCACAGACACAATGCCTTTGTGCAACACTTTATTGGGAAAGATTTACACATGGTGA-CCTGTCATAGGCCAAAGGATGAGAAGAGGGTTCCAGGAGCGTTGGG-GCCCCGAGGTGGCTCAGATGGAAGCCAT----GGGACGGCCGTCCCCAGGCCCGCGCAtctgcatctcagtttcccctttgtgaaatgggaagcttatgcttccttccaagtctgcaatatcggtgcaatgagctaaaagtggagcgAAAGACACAAGGAAGAGG-------CTTCCCACTCCCAGGACCTGCCCCCAAGCT--CTGACCCCACATTGTGGATGCAAAGAAAGGGAATTTGTCCAAAA--CCCACTGCCCAGGGGCCCCTTC-----TGTTTTGGGGAAGTGCAGTGCTCTCTGGATACCCAGAAGCTGGAGCAGGGGCCCATGA-GACTCTTGTCTGGA---CAAAACTTTGATTTTGTAGGAGTGGA---------G---GT-------GGTCCCTGGGC---------------AGAGGG------CAGGGAAGACACCCCCGGGTCTGCTTC-AGTTGCAGGCAGAGTATTT--AGCTGGGGAAAAGGAAATTCTCTCCAGGACCCTCTCCAAGGTAAGGACTCTTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATTCCCGGG------------------A-----CCAGCTGGCAGAGGGAGTGTCACGG----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGATGCTGCCTTCCGCCGGCTGGGGCTGCCCCCACCCAAAGCCAGCCCCAGCCCCAGGGCTGCCAGGGCCAGGAAGTGGATACAGAAGTAGATGGAGGCCCAGTACCGAAGCGTGTCGGCCAAGGAGAGCAGCACGAAGCCCATGCACATGTAGTCATAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCTGGGCTCAGCCGCCCCCGCAGGGCTGACTCCAGCCGGCCCTCGGCAGCCAGGCACAGAGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCGTGCCAGTAGGCGCTCAGCAGCATGGTCCAGGCGCTCCT-GAAGGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45430073 1803 + 49145316 cctcctccctcggacccaggagtccagg-ccccaggccctcctccctcagacccaggagtccaagtgccagcctctacttcacctgaacccaggggtccacagccctcgatcccatccccAGGGACTCAAA---------TGTGGACCCCTCCTACTCCAGGGCAGAGGAGTCCAGCCTTCAACTTCCTTTTCCCTCTAGTTCGGGAGTGTGGGGACCCAGCCTCTCCTATACCC--GACACCCAAACTCCTA-------------------------------------GCCTCTCACCCTCCCCTCC----TCCCAGACTAGCCTGGTTCTCCAGGCTCCTCCTCCTCAGACCCTGGAGTTCCAGCCTCCACTTCCCTTCTCTCCTGTAATACCAGGAAGTGAAACCTTCTCTCTTCAGCCCTC-AGGCTCAGGAG--------------------------------TCCCACCTAGCCTGAAGGTTGGGTGGATCTGAACCTCTCCTGGCTT-C---CCTACCTCCTCTGGCCTCCCGGGGGGCCAGCCACCCGCTAGAGGAGCCCCAGGCTGCTGAATCCAGGGTCGGGTTTT-CTTCCATGGCCTCAGGCTGGGC--------TCTCTAGTGGCCA-GCAGGCAGACACGGCCCCAGGTA----AGGGCGGGGCCAGGG-CAGGTGTGTACCTGGCCGGCAGGTGGCCCGG---AGGGAGTTAGGTACACTTCTTCCTGTAGTTTCTCAGGGCTGGGGATTCGAAAGGTCTCCTGGGACCTGAAGTCCCCGTGGTGCCC-G---GGCCTGACCGTTTGGTTCCTGG--GCCAGGCTGGCCG----CTGCACCTCAC-----------------------------------------CTGAGAC--TCCCGGTGTTTGTCA-CCCGCAGGTACTTGCACAGACACGATGCATTTGTGCA--ACTTTATTGGGAAAGATTTACACACTGTGA-CCTGTCACAGGCCAAAGGATGAGAAGAGGGAGCCAAGAGTGTTGGG-GCCCCAAGGTGGCTCAGACATAAGCCGT----GGGGTGGCAGGCCCCAGGCCTGTGTAtccgtgcctcagtttcctttttgtgaaatgggaagcttatgcttccttccaagtctgcaatatgggcgtgatgagctaaGGGCGGAGTGAGAGACACAGGGAAGAGG------------------------CTGCCCC--AGCT--CCAACCCCACACTGTGGATGC--AGAAAGGGAATTTGCCC-AAA--CCCACCACCCAGAGGCCCCTTC-----CGTTCTTGGGTAGCGCAGTGCTCTCTGAAGATCCCAAAGCCGGAGCAGGGGCAAGGGA-GACTTT--TCAGGA---CAGGACTTGGATTTTGTAGGAGGGGAGTGGCCACTG---GA-------GGCCCCTGGGC---------------AGAGGG------CAGGGAGGACACTGGCAAGTCTGCTTC-AGTGGCAGGCAGGGTATT---AGCTGGGGAAGAGGAAATTCTCTCCAGGACCCTTGCCAAGGTAAGGACTCCTTCTGGG--GAGGAGAC------------------------------AGCAGCCTGGTTCACAGAATCCCCGGG------------------A-----ACCGCTAGCAGAGGGAGCGTCTCGA----AGCTTACTCCTCCCGGAGCTTCTCCGGGGCAAG---GCTGGTGGGCTGGGAGGCTGCCTTCCGCCGGCCGGGGCTGCCCCCAGCCAATGCCAGCCCCAGCCCCAGGGCAGCCAGGGCCAGGAAGTGGATGCAGAAGTAGATGGAGGCCCAGTACCGAAGTGTGTCTGCCATTGAGAGGAGCACGAAGCCCATGCACATGTAGTCATAGGCACGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGCCCCCTTGGGCTCAGCCGCCCCCGCAGGGCAGACTCCAGCCGGCCCTCCGCAGCCAGGCACAGCGGGATGGTCAGGAAGCTCAGGTAGTAGCCCGGGTGGAGGCCATGCCAGTAGGCACTCAGCAGCATGGTCCAGGCGCTCCT-GAGGAGG- i calJac3.chr22 C 0 I 1119 s mm10.chr7 3677105 1754 + 145441459 ----------------------TTCGTGGCCCTAGACTCTCCCCCAC--------GGAGTCTAGGT-----------------TTGAACTC------CCATATCCCT-----TCTACTCTAAG-----------------TGTG----------ACTCTA--------AACTTCAA----CAACTTCCCGTTCCCTC--ATTGGTGAGCTTAGAATCCTGGCTCCTCACAAGCCTGATA---TTAGGGACCCG-------------------------------------TTTCCTGACTCTGTCCTCCAAGACCGTAAACTTGTACTGTTTTTCGGG------------AAATC---------------TGAGTTTCCTTCT---TAGGAAACCCAGGAAATGAAAGT---CCTCTTCGAGTCTC-AGGTTCAGGAGCTCAG--CTTCCCT----TCCTTTA--------------------------TGAATGGACCTGA--CTTTGCTGGACT-CTCTCCTACCTGTTCTGGCTTTCCGGGAGCTGGAGCAGGCTGGGGACTGGCCCCAGGCTTCCATGTTTGTGGATGTACCGTACTTCCA--GCACCCGTTCTTTCT------GTCTCTGGAGGCCC-CAGGGCGGGGACTGCCCTCGGTAAGGGAGGGAGGGGCCTGCTACAGGTCTGCACCTGGCCACTAGGTGACCCGG----GTGACTGCGGTACA---TTTCCTAT-----------------------AAAGGTCTCCTGGGAATTGAAGTCCTTACAGCCTCCTGAGCGGCCAAAC-------TTCATGGCAGCCAGACCC--------CCCCACCCCACCCCCCCAATACACACACAAATGCACACTGGCATTCTGGGT-CAGTGTCTTT-----GGTTTGTTG-CCCACAGTTATACTCACAAACA-AATGCA--TGTGTAACACTTTATTGGGAAAGCTTTATACATTCTGG-CCTGTCACAGGCCAAG-GATGACACTGGGTGGTAGGTTGTATGGGGAGCCCAGAAATGGCTCAGGCAGAAGCTGCTGTAAGAGCAAGCTCCCCTGGGGCTTCTCA----CATTTTAGCTTCTCCTTCAGCATGTGTAAGAC-CATGGTC---------TCTGAAACACTGGTGTGATGA--TAAAAACAAAGAGGAAAAC------AAGAAGGCTATCCCTCCCCTCTCCCAGAACCTGGCCCTGAAGTTCCTGCCCCCATACTGGGGACCC----ACTGGGAGTCTGTCTAAGATGCCAGATGACCACTGGTCCCTGCAAGGGCATTTTTGGGAAGTGTG--GCTTTTTGAACATCTGAAGATTGTTGCAGAGATAATAGG---TTCAAGAGTGGATAGTAATACCCTGATGTTAGCAGAG-GAA---------G---GTCTGAAAAGGTCAAGATGC---------------TGAGAGAGCCCAAGAGAAGGATACC------TTAGCTTTAAATAGAAGGCAGAGGAATT--A-TTTGGGAAGAGGGGATCCTCTCCAGGCTCTTAGCCAAACAAGGGATTCTTGCTGGGTAAAGGaaacaaacaaacaaacaaacaaaAACCCCAAACAAACAGCCTGGTTCATGGAATTCCCAAA------------------AAAGCTTGAACTGGAAGGCAGGCCAATGCAGCAG-AGCTCACTCTTCCCGGAGCTTTTCCTTCGCTTGGCTGCTGGTGGCCTGGGATGGTGTCTTCCTCTTGCTGGGGCTGCCCCCACCCAAAACCAGCCCCAGCCCCAAGCAAGCCAGGGCTAGAAAGTGGACCCAGAAGTAGATGGAGGCCCAGTACCGGAGTGTGTCAGCCATGGAAAGGAGCACAAAGCCCATGCACATGTAGTCGTAGGCACGCATCTTCAGGAACCAGTGGACCCAGTCCCAGGCTTTCTGGCCCCCGGGGCTCAGGTGTCTCCGCAAGGCTGACTCCAAATAGCCCTCAGCAGCCAGGCACAGCGGGATGGTCATGAAGCTTAGGTAGTAACCAGGGTGGAGGCCATGCCAGTAGGCACTCAACAGCATGGTCCAGGCACTCCTGGAGGAAG- i mm10.chr7 C 0 C 0 s canFam3.chr1 19637707 1796 - 122678785 CCTCCTCCCTCAGACCCAGGAGCCCAGG-CCCCTGCTCCTCCTCCCTCAGACCCAGGAATCCAGGTCCCCAGTCCCTCCTCCTTCAGACCCAGGAGTCCA-GGCCCCATGTCCCCTCTGTAAGCACTGAAATGTGGGCTCCCTAGACCCCTCCTTCCTCAGGGCTGAGGAACCCAGTCTTCAATTTCCTTTTTCCTCTTGCTCAGGAGTTT-GCAACCCTGCCCCCCCTCTTC--------------------------------------------------------------------TCCCCTCT----------ACT------GCTCCCCAGG--------------ACACAGGAGTCCTAGCTCCTGGTTCCCTTCTCCCTCAGACAACCAGGAATTTAACCCT-CCCCCTTCTGCCCTCTGGACCCTGGAGTTTCAGCCTCCGGTCCCTGCCTCCCTCAGGACTTCCACC-AGCCCAA---------GGGGCTGGACCCCCTCCCACGC-C---CCCACCTGCTCTGGCCTCCCGGGGTGCCAGCCACCCTCCAGGGGAGCCCCAGGCCTCCGGTTCCCATGTCGGGCGCT-CTTCCATGGCCGCAGGTGAAACTGTTTCCGTCTCCAGCGGCCAGCTGGGCGCGGTCAGCCGCAGGTA----AGGAAGGGACATGGG-CAGGTCCATACCTGGCCACCAGGTGGCTCAGGGAGGGGAATCCGAAGCA---CTTGTCATCAACCAACAGGGCGGCTGCT-CGAAAGGTCTTCTGGGAACCGAAACCCCCA-GATGCC------AGTGTGACACCAGGGAGCCTGG--CTCGAGCCCATC-----CTGCAGCGCCCATC------------------------CTGCAGCGGCTGT-GTGAGCCCCACAC-CTGGTGGTCA-CTCATAGACACACATACAGAC--------CTCTTGGAACATTTTATTGGGGGAGGTTCACATAGTCTGACCCTACCTTAGGCCAGAAAATGACAAGAGGGTGACATAAGCACTGGG-ACCCTGAGGTGGCTCAGATGGAAGCTGC----AG---------CTCCTAGC-----------TGCCTCAGTTTACCCGTTGTGAA-----------ATGTTCCCTTCCCGGCCTGAAACACTGCT-TGATGA---------AAGGGGGAAAGCCCACGAGAGAGG--------TTCCCACTCCCAGGGCCTGCCCTGAGGCT-CCCGGCCCCACACCATGGAGCCAGAAACAGGGAATTTGCCCGAGA--AT-----CCCCGTGGCCCTGTT--GGGGGGCTGGGGAGTGGGTAGCTCGCTCTGAAGACCTGGCAGCTGGGGCAGGGACCAAGGGAGATTCT--TCTAGA---CAACACCTGAACTTTCCAGAAGGGAA---------GTCTGA-------GCTTCCTGAGCCCTCGGGTCAGGGCAGGGGAG------CAGGGAGAGCAGCCCTGC-CTTGCT---GGGGGAGGGTGGGGTGCAG--AGCTG------AGGGAATCCTCTCCAGGCCCCAGCCCAA-TCAGGGGCTCTTTCTGGG-AAAGGAGAC------------------------------AGCAGCCTGGTTCATGGAATTCCCAGGCAGAAGCTTAGTGGCTGCA-----GTGGCGGGCAAA-GGAGTGTCACGGCGGTGGCCTACTCCTCCCGGAGTTTTTCTGGGGCGAG---GCTGGCGGCCTGGGGTGACGTCTTCCTGCGGCCGGGGCTGCCCCCACCCAGGGCCAGCCCCAGCAGCAGGGCGGCCACAGCCACGATGTGGACACAGAAGTAGACAGAGGCCCAGTACCGGAGGGTGTCTCCCAGGGACAGCAGCACAAAGCCCATGCACATGTAATCGTAGGCGCGCATCTTCAGGAACCAGTGCACCCAGTCCCAGGCCTTCTGGCCCCCGGGGCTGAGCCGCCCCCGCAGGGCTGACTCCAGGCAGCCCTCAGCCGACAGGCACAGCGGGATGGTCAGGAAGCTTAGGTAGTAGCCAGGGTGCAGGCCGTGCCAGTAGGCGCTCAGCAACATGGTCCAGGCGCTCCT-TGGGGGAG i canFam3.chr1 I 878 C 0 a score=42844.000000 s hg38.chr19_GL949753v2_alt 149248 14 + 796479 AGGCTGGGAGTCAG s panTro4.chr19 59083869 14 + 63644993 AGGCTGGGAGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959678 14 + 60714840 AGGCTGGGAGTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726120 14 - 106955855 CAGCTGGGAGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017537 14 + 64156825 AGGCTGGGAGTCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041178 14 + 59248254 AGGCTGGGAGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145345 14 + 51301725 aggctgggggtcAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850624 14 + 50890351 AGGCTGGGAGTCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3678859 12 + 145441459 --ATATTGAGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19639503 14 - 122678785 AGGCCGAGATTCAG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45431876 1119 + 49145316 I a score=253274.000000 s hg38.chr19_GL949753v2_alt 149262 78 + 796479 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac s panTro4.chr19 59083883 78 + 63644993 GACCTACGagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--cccctcctccctcagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959692 78 + 60714840 GACCTGCGagtccaggtccccagtgcccacggtccccagatccaggagtccaggaccccag--cccctcctccctcagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726134 78 - 106955855 GACCTGCAagtccaggtccccagtgcccactgcccccagatccaggagtccaggaccccag--ccccgcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017551 78 + 64156825 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagttccgggctccag--cccctcctccctcagac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041192 78 + 59248254 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtcccgggctccag--cccctcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145359 78 + 51301725 GACCTGCGAGTCCAGGTCCCCAGTGCCCACTGACACCAGATCCAGGAGTCCGGggctccag--cccctcctcccttaGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850638 78 + 50890351 GACCTGCGagtccaggtccccagtgcccactgaccccagatccaggagtccggggctccag--cccctcctccctcagac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45432995 77 + 49145316 gacccagaaatccagagccccagc-ctctcctcccccagccccaggagtccagacccccag--cccctcctccccaagcc i calJac3.chr22 I 1119 C 0 s mm10.chr7 3678871 54 + 145441459 GACACACAAGTTCAAG-CTTCAGTCCTCACTGTCTCATG-------------------------CCTCCCTTCCTCAAGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19639517 79 - 122678785 GACCCGGGAG-CCAGGCCCCCTAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCCAGCCCCCTCTTCTCTCAGAC i canFam3.chr1 C 0 C 0 a score=76359.000000 s hg38.chr19_GL949753v2_alt 149340 35 + 796479 cgagaagtgcagg--cccagcccc-tcctccctcagac s panTro4.chr19 59083961 35 + 63644993 ccagaagtgcagg--cccagcccc-tcctccctcacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959770 13 + 60714840 ccagaagtgcaga------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726212 35 - 106955855 ctagaagtgcagg--cccagcccc-tcctccctcagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017629 34 + 64156825 ccaggagtgcagg--cccagcccc-tcctccctcaga- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041270 35 + 59248254 ccaggagtgcagg--cccagcccc-tcctccctcagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145437 36 + 51301725 CCAGGAGTGCAGG--ccccaccccgtcctccctcagac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433072 37 + 49145316 ccaggagtccagacccccggcccc-tcctcccccaggc i calJac3.chr22 C 0 C 0 s mm10.chr7 3678925 35 + 145441459 CCAGGAGTACAGG--GCTCAGCCC-TCCTCCCTCAGAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19639596 36 - 122678785 CCAGGAGTCCAGG-CCCCAGCCCC-TTCCTCCTCAGAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46850716 0 + 50890351 C a score=57425.000000 s hg38.chr19_GL949753v2_alt 149375 31 + 796479 ccaggagtccaga-ccccacc-ccttcctccct s panTro4.chr19 59083996 31 + 63644993 ccaggagtccagg-ccccagc-tcctcctccct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017663 32 + 64156825 ccaggagtccaggcccccagc-ccctcctccct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041305 31 + 59248254 ccaggagtccaga-ccccagc-ccctcctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145473 32 + 51301725 ccaggagtccaga-ccccacctccctcctccct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433109 31 + 49145316 ccaggagtccagg-ccccagc-ccctcctccct i calJac3.chr22 C 0 C 0 s mm10.chr7 3678960 29 + 145441459 TTAGGAGTTCAGG-CCC--AC-TCTTCCTTCCT i mm10.chr7 C 0 I 4687 s canFam3.chr1 19639632 30 - 122678785 CCATGAGTCCAGG-CCCCA-C-CCCTCCTCCCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55959783 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=120964.000000 s hg38.chr19_GL949753v2_alt 149406 90 + 796479 cagacccaggagatcagg-ccccag--tccctcctccctcagacccaggagaccag-accccacc-----------------------------------tccctcctccctcagatccaggagtccag s panTro4.chr19 59084027 124 + 63644993 cagacccagaagtgcagg--cccag--cccctcctccctcacacccaggagtccag-accccaccccttcctccctcagacccaggagatcaggccccagtccctcctccctcagacccaggagtccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959783 71 + 60714840 --------------------cctgg--cccctcctccctcagacccaggagtccag-accccacc-----------------------------------ttcctcctgcctcacatccaggagtccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60017695 89 + 64156825 caga-ccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i rheMac3.chr19 C 0 M 200 s macFas5.chr19 55041336 90 + 59248254 cagacccaggagtccaggcccccag--cccctcctccctcaga-ccaggagtccag-gcccccag-----------------------------------cccctcctccctcagacccaggagtccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145505 61 + 51301725 cagatccaggagaccagg-ccccag--gccctccccactcagacccaggagaccag-gccccagg---------------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433140 90 + 49145316 cagacccagaaatccagacccccag--cccctcctccctcagacccaggagtccag-gccccagc------------------------------------ccttcctcccccagacccaggagtccag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639662 94 - 122678785 CAGACCCAGGAGTTCAGGCCCCTCGGCCCCCTCCTCCCTCAGACCCAGGAGTCCAGAGTCCCAGC-----------------------------------CCGCTCCTCCCTCAGACCCAGGAGTTCAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C a score=3412.000000 s hg38.chr19_GL949753v2_alt 149496 18 + 796479 --accccacttccctcctcc s panTro4.chr19 59084151 18 + 63644993 --accccacctccctcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959854 7 + 60714840 --agcccac----------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55041426 18 + 59248254 --gcccccagcccctcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145566 9 + 51301725 -----------ccctccccG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45433230 17 + 49145316 ---gccccagcccctcctcc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639756 20 - 122678785 GCCCCTCAGCCCCCTCCTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e rheMac3.chr19 60017784 200 + 64156825 M a score=9440.000000 s hg38.chr19_GL949753v2_alt 149514 7 + 796479 ctcagat s panTro4.chr19 59084169 7 + 63644993 ctcagac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60017984 7 + 64156825 ctcagac i rheMac3.chr19 M 200 C 0 s macFas5.chr19 55041444 7 + 59248254 ctcagac i macFas5.chr19 C 0 C 0 s calJac3.chr22 45433247 7 + 49145316 ctcagac i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639776 7 - 122678785 CTCAGAC i canFam3.chr1 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e ponAbe2.chr19 55959861 0 + 60714840 C e nomLeu3.chr10 102726247 0 - 106955855 C e chlSab2.chr6 46850716 0 + 50890351 C e papAnu2.chr19 47145575 0 + 51301725 C a score=102117.000000 s hg38.chr19_GL949753v2_alt 149521 44 + 796479 ccaggagaccagaccc--cacctccctcctccctcagatccaggag s panTro4.chr19 59084176 44 + 63644993 ccaggagaccagaccc--catttccctcctccctcagatccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959861 25 + 60714840 ---------------------ttccctcctccctcagatccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726247 44 - 106955855 ccagaagaccagaccc--cacctccctcctccctcagatccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60017991 44 + 64156825 ccaggagtccagaccc--cagctccctcctccctcagatccaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55041451 44 + 59248254 ccaggagtccagaccc--cacctccctcctccctcagatccaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46850716 43 + 50890351 tcaggagcccaggccc--cacc-ccctcctccctcagatccaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433254 44 + 49145316 ccagaaatccaggccc--ccagcccctcctccctcagacccaggag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19639783 46 - 122678785 CCAGGAGTTCAGGCCCCTCAGCCCCCTCCTCCCTCAGACCCAGGAG i canFam3.chr1 C 0 I 2038 e mm10.chr7 3678989 4687 + 145441459 I e papAnu2.chr19 47145575 0 + 51301725 C a score=674534.000000 s hg38.chr19_GL949753v2_alt 149565 264 + 796479 accaggccccaggccctccccactcagacccatga-------ccctagctccGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG-----ttttttttt-tttttttttgagacagagtctcgctctgtcgcccagg s panTro4.chr19 59084220 266 + 63644993 accaggccccagaccctccccgctcagacccaTGC-------CCCTAGCTCCGGAAGGCGGAGGAGGCTACAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTTCCACACACACT---CAGTCCTAT-CAAGACCCTCTTCTTCTTTAAAGATTTAACATTTTATAT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTCTTAATTCTTCAGCCCAGT--GG---ttttttttttt-tttttttttgagacagagtcttgctctgtcgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55959886 260 + 60714840 accaggccccaggccctccccgctcagacccatgc-------ctctagctccagAAGGCGGAGGAGGCTATAGGCCTCTGTCTCCTTCAGGGATCCAGGAGCTCCCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTTTAAAGATTTAACGTTTTATAT-----TCCACTGCCCTTCCTCTCCCAAGAACAACAAGGCATAATTCTTCAGCCCAGT--GG---------ttttt-tttttttttgagacagagtctcgctctgtcgcccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726291 273 - 106955855 accaggccccagaccctccgcgctcagacccaTGC-------CCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCCTCAGTCTCCTTCAAGGATCCGGGAGCTCGCAGCCTTCCATACACACT---CAGTCCTAT-CAAGACCCTCTCCTCCTCTAAAGATTTAACACTTTATATTCCACTCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAGT--GGtttttttttttttt-tttttttttgagacggagtctcgctctgtcgcccagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018035 265 + 64156825 accaggccccaggccctccctgctcagaaccaTGC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGTTTTTTTTTTGTTTGTTTTTTTTTTAGACAGAGTCTTTCTCTGTTGCCCAGG i rheMac3.chr19 C 0 M 581 s macFas5.chr19 55041495 265 + 59248254 accaggccccaggccctccctgctcagaaccaTAC-------CCCTAGCTCCAGAAAGCGGAGGAGGCGATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTCTTCAGCCCAAT--GGGtttttttttgtttgttttttttggagacagagtctcgctctgtcacccgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145575 242 + 51301725 ----------------------CTCAGAACCATGC-------CCCTAGCTCCAGAAGGTAGAGGAGGCTATAG------GTCTCCTTCAGAGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAagatttaacattttatgt-----tccACTGCCCTTCCTCTCCCAGGACCAACAAGTC-TAATTATTCAgcccagt--ggttttttttttggtt-ttgttttttgagacggagtctcgctctgtcacccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46850759 266 + 50890351 accaggccccaggccctccctgctcagaaccatga-------ccctagctccGGAAGGCGGAGGAGGCTATAG------GTCTCCTTCAGGGATCCAGGAGCTCGCAGCCTCCCATACACACT-CACAGTCCTAT-GAAGACCCTCTCCTCCTTTAAAGATTTAACATTTTATGT-----TCCACTGCCCTTCCTCTCCCGGGACCAACAAGTC-TAATTCTTCAGCCCAGTGGGGttttttttttgttt-tttctttttgagacggagtctcgctctgtcacccagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433298 264 + 49145316 tccaggccctgggccctccctgctcaaacccaTGCCCCTTTTCCCTAGCTCCAGAAGGTGGAGGAGGCTATAGGCTGCTGTCTCCTTCAGGGATCCAGGAGCCCCGAGCCTTCCACACACACTTCACAGCTGTATCCCAGGCCATCTCCTCCTTTAAAGATTGATCATTTTATGT-----TCCACTGCCCTTCCTCTCCCAGGACCAAGAAGTC-TAATTGTTGGGCCCACT--GGttctttttctttct----------------gagtcttgccctgtggctcagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=107570.000000 s hg38.chr19_GL949753v2_alt 149829 46 + 796479 ctagagtgcagtggcgcgatcttggctcactgcaagctccgcctcc s panTro4.chr19 59084486 46 + 63644993 ctagagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960146 46 + 60714840 ctagagtgcagtggcgcgatctcggctcactgcaagctccgccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726564 46 - 106955855 ctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041760 46 + 59248254 ctggagtgcagtggccggatctcagctcactgcaagctccgcctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145817 46 + 51301725 ctggagtgcagtggctggatctcgactcactgcaagctccgcctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851025 46 + 50890351 ctggagtgcagtggcccgatctcagctcactgcaagctccgcctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433562 46 + 49145316 ctggagtgcagtgacgcaatctcggctccctgcaacctccgcctcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M a score=5192.000000 s hg38.chr19_GL949753v2_alt 149875 4 + 796479 cagg s panTro4.chr19 59084532 4 + 63644993 cggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960192 4 + 60714840 cagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726610 4 - 106955855 cggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041806 4 + 59248254 cagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46851071 4 + 50890351 cagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433608 4 + 49145316 ttgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e rheMac3.chr19 60018300 581 + 64156825 M a score=53422.000000 s hg38.chr19_GL949753v2_alt 149879 48 + 796479 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg s panTro4.chr19 59084536 48 + 63644993 ttcacgccattctc-ctgcctcagcctcccgagtagctgggactacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960196 48 + 60714840 ttcacgccattctt-ctgcctcggcctcccgagtagctgggactacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102726614 48 - 106955855 ttcacgccattctc-ctgcctcagccaccagagtagctgggactacagg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46851075 48 + 50890351 ttcaagtgattctc-atgcctcagcctcccaagtggctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45433612 48 + 49145316 ttca-gccattgtcactgcttcagcctcccgagtagctgggattacagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=205251.000000 s hg38.chr19_GL949753v2_alt 149927 292 + 796479 cgcccgccaccacgcccggctaattttcttttctatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgcccgccttggcctcccaaagtgctgggatcacaggtgtcagacaccacacccggGC-AGCCcggtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---gggtggggcccaggagaagtcttcca s panTro4.chr19 59084584 293 + 63644993 tgcccgccaccatgcccggctaattttcttttctatttttagtagagat-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgccttggcctcccaaagtgctgggatcacaggtgtcagccaccacacccggGC-AGCCTGgtggttcttaacctggggtcccaggtctggcatcagcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccctggg---ggggggggcccaggagaagtcttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55960244 292 + 60714840 cgtctgtcaccacacccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgctctcctgacccc--gtgatccgcctgcctcggcctctcaaagtgctgggattacaggtgtgagccaccgcacccggtc-AGCCcggtggttcctaacctggggtcccaggtctggcatcatcatcacctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-gg---ggttggggcccaggagaagtcctcca i ponAbe2.chr19 C 0 I 478 s nomLeu3.chr10 102726662 296 - 106955855 cgcccaccaccacgcccggctaattttcttttgtatttttagtagagac-ggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatctgccctccttggcctcccaaagtgctgggattacagacatgagccactgtgtccggccTAGCCcggtggttcttaacgtggggtcccaggtctggcatcaacatcgcctgagaacttgtgagacatacaaatccttgtccccaccccttttgcaccagaagccct-ggttagggtggggcccaggagaagtcttcca i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433660 273 + 49145316 catgtaccaccactcctggctaat----ttttctattcttagtagaggcgggggtttcaacatgttggccaggctggtctcaaactcttgacctcaggtgatccgcccacctcagtctcccaaagtgctgggattctaggcgtgagccactgAAGTGGGCC----Ccagtggttctt------------cagctctggcatcagcatcgactgagaacttgtgacacacacagatccctgtcgccacgcctcctgcaccagaagccct-gg---ggctggggccc---agaactcttccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=66628.000000 s hg38.chr19_GL949753v2_alt 150219 151 + 796479 agttaacaagtcctcca-gtgactctgatgcctgttaacatttgacaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT s panTro4.chr19 59084877 151 + 63644993 ag-taacaagtcctccaggtgactctgatgcctgttaacatttgagaactcctgCCTGGCTCATGAAGATCCAGAAGTCCCTGGCCTGTGGTCCTTCCTTATTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCACCATCTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102726958 151 - 106955855 gg-taacaagtcctccaggtgacttagatgcctgttaacatttgagaactcctgCCTGGCCCATGAAGGTCCAGAAGTCCCTGGCCTGTGGTGCTTCCTTACTCTGGGCCCAGGAGATATGTTCCTCTTCCTCCAAGGCCCAGCGCCATCTT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45433933 141 + 49145316 gg-taacaagtattccaggtgacttcgatgcctgctaacatttgag-aCTGCTGCCTGGCCCATGAAGA---------CCCTGGTCTGTGGGCCTTCCTTATTCTGTGGCCAGGAGTTATGTTCCTCTTCCTCCAAGGCCCAGATCCATCTt i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=17634.000000 s hg38.chr19_GL949753v2_alt 150370 79 + 796479 TCCTCACtctttt----------tatttttttggagacagagtctcgctctgttgccacacgacaaggctcactgcagcctctgcctct s panTro4.chr19 59085028 89 + 63644993 TCCTCACtcttttttattttttatttttttttggagacagagtctcactctgtcgccacaggacaaggctcactgcagcctccgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727109 85 - 106955855 TCCTCACtctttt----tttttttttttttttggagacacagtctcgctctgtcgccatgcgacaaggctcaatgcaacctccacctct i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e papAnu2.chr19 47145863 0 + 51301725 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=1813.000000 s hg38.chr19_GL949753v2_alt 150449 4 + 796479 tgga s panTro4.chr19 59085117 4 + 63644993 tgga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727194 4 - 106955855 tggg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47145863 4 + 51301725 tggg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e macFas5.chr19 55041810 0 + 59248254 C e rheMac3.chr19 60018300 581 + 64156825 M a score=42472.000000 s hg38.chr19_GL949753v2_alt 150453 48 + 796479 ttcaagcgattcttatgcctcagcctcccaagtagctgggattacagg s panTro4.chr19 59085121 48 + 63644993 ttcaagcgattcttatgcctcagcctcccaagtagctgggattatagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727198 48 - 106955855 ttcaagctattctcatgcctcagcctcccaagtagctgggattacagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041810 48 + 59248254 ttcaagtgattctcatgcctcagcctcccaagtggctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145867 48 + 51301725 ttcaagtgattctcatgcctcagcctcccaagtagctgggattacagg i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e chlSab2.chr6 46851123 0 + 50890351 C e rheMac3.chr19 60018300 581 + 64156825 M a score=409960.000000 s hg38.chr19_GL949753v2_alt 150501 330 + 796479 caagcgccaccaaactcagctaatttctgtatttt---ttgttgttgttgttcagacggagtctcgctctgccgcccatgctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctggtaaagacggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggcgtgagccactgcacccagcca s panTro4.chr19 59085169 330 + 63644993 caaatgccaccaaactcagctaatttttgtatttt---ttgttgttgttgttcagacggagtctcactctgccgcccatgctggagtgcagtggcgcaatctcagctcactgcaacctctgcctcccgggttcaagtcattctcctgcctcagcctcccaagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctagtaaagatggggtttcaccatgttggccaggatgctctcaatctcttgaccttgtgatccacccgccgtggcctaccaaagtgctgggattacaggtgtgagccaccgcacccagcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102727246 333 - 106955855 caagtgccaccaaacccagctaatttttgtattttttgttgttgttgttgttcagacggagtctcgctctgccacccatgctggagtgcagtggtgcaatcttggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagcagctgggactacaggtgcccaccaccatgccaggctaatttttgtatttctgttaaagacggggtttcaccatgttggccgggatggtctcgatctcttgacctcgtgatccacccgtcttggcctaccaaagtgctgggattacaggcgtgagccaccgcgcccggcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55041858 328 + 59248254 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagacggagtctcgctgtgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagcagcggggactacgggtgtgtgccaccacgcctggctaatttttatatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47145915 327 + 51301725 caagcgccaccaaacccagctaatttttgta-ttt---t--ttgttgttgttcagacggagtctcgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctcctgagttcaagtgattctcctgcctcagcctcccgagcagctgggactatgggtgtgtgccaccatgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851123 326 + 50890351 caagtgccaccaaacccagctaatttttgtatttt---t--ttgttgttgttcagac--agtctcgctctgtcacccaggctggagtgcagtggcgcagtctcggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagcagctgggactacgggtatgtgccaccacgccaggctaatttttgtatttttggtaaagacggggtttcaccatgttggccaggatggtctcgatctcttgaccttgtgatccacctgcctcggcctcccaaagtgctggaattacaggcgtgagccaccgtgcccagcca i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55960536 478 + 60714840 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=65810.000000 s hg38.chr19_GL949753v2_alt 150831 39 + 796479 tttttgtatttttagtagagatggggtttcaccacgttg s panTro4.chr19 59085499 39 + 63644993 tttttgtatttttagtagagacggggtttcaccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55961014 39 + 60714840 tttttgtatttctggtaaagatggggtttcaccacactg i ponAbe2.chr19 I 478 C 0 s nomLeu3.chr10 102727579 39 - 106955855 tttttgtattttcagtagagacagggtttagccacgttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042186 39 + 59248254 tttttgtatttttagtagagatggggtttcaccacattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146242 39 + 51301725 tttttgtatttttagtagagatggggtttcaccacattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851449 39 + 50890351 gttttgtatttttagtagagatggggtttcaccacattg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M a score=108500.000000 s hg38.chr19_GL949753v2_alt 150870 94 + 796479 gccaggatggtctcgatctcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagccTC s ponAbe2.chr19 55961053 94 + 60714840 gccaggatggtcttgatctcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggtctgagccaccgcgcccagcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727618 92 - 106955855 gccaggatggtcttgatcttctgactttgtgatccacccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccATCC-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042225 93 + 59248254 gccgagatggtcttgatctcctgaccttgtgatccatctgcctcggcctcccaaagtg-tgagattacaggcgtgagccattgcacccggcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146281 93 + 51301725 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaaatg-tgggattacaggcgtgggccattgcacccggcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851488 93 + 50890351 gccaggatggtcttgatctcctgaccttgtgatccatccgcctcggcctcccaaagtg-tgggattacaggcatgggccgttgcacccggcctc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434074 0 + 49145316 C e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=34061.000000 s hg38.chr19_GL949753v2_alt 150964 26 + 796479 -tttttttttctttgtaaagatggagt s ponAbe2.chr19 55961147 26 + 60714840 -tttttcttcctttgtagagatggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727710 23 - 106955855 ----ttttttctttgtatatatggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55042318 25 + 59248254 -tt-ttttttctttgtagagatggcgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146374 25 + 51301725 -tt-ttttttctttgtagagatggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851581 25 + 50890351 -tt-ttttttctttgtagagatggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434074 26 + 49145316 ttt-ttttttctttgtagagatgtaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e rheMac3.chr19 60018300 581 + 64156825 M e panTro4.chr19 59085538 0 + 63644993 C a score=443611.000000 s hg38.chr19_GL949753v2_alt 150990 211 + 796479 cttgctatgttgacctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGCGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg s ponAbe2.chr19 55961173 210 + 60714840 cttgctgtgttgccctggctggtctc-aactgctgatcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccattgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCATTGGCTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g-tgcaatggc--tggcacctgtaatcccagcactttgggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727733 213 - 106955855 cttgctgtgttgccctggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaattacagatgtcagccactgcacctggccAACTCTTGTTTTCTTGAGAAGGGAGGACCGTTGGCTTTCTGGTTCTTCAAGAGTGTGGAggttgg-g-tgcaatggctgtggcacctgtaatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60018881 199 + 64156825 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgtggcactttgggagg i rheMac3.chr19 M 581 I 1301 s macFas5.chr19 55042343 199 + 59248254 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTCTTGAGAAGGGAAGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctgg-g--gcaacggc--tggcgcctgtaatcgcggcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47146399 199 + 51301725 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------cattgcacctggccaagtcCTGTTTTCTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAGGCTGG-G--GCaatggc--tggcacctgtaatcgcagcactttgggagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46851606 200 + 50890351 cttgctgtgttgcccaggctggtctcgaactcctgagcttaagtgatcctctcaccttggcctcccaaaatactggaatta-----------caTTGCACCTGGCCAAGTCCTGTTTTTTTGAGAAGGGAGGACCACTGGTTTTCTGGTTCTTCAAGAGTGTGGAggctggag--gcaacagc--tggcgcctgtaatcgcagcactttgggagg i chlSab2.chr6 C 0 I 1319 s calJac3.chr22 45434100 201 + 49145316 gttgctgtttt--ccaggctggtcttgaactcctgagcttaagtgatcctctcaccttggcctcccaaagtactggaattacagacgtcagccactgcacctggccAACTCCTGGTATCTTGAGAAGGGAGGACCACTGGCTTTCTGGTTCTTCAGGA---------CCAG-GTTATAgtgcc--ttgcacctgtaatcccagcactttgggagg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=2800.000000 s hg38.chr19_GL949753v2_alt 151201 1 + 796479 c s ponAbe2.chr19 55961383 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727946 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020381 1 + 64156825 c i rheMac3.chr19 I 1301 C 0 s macFas5.chr19 55042542 1 + 59248254 c i macFas5.chr19 C 0 I 1305 s papAnu2.chr19 47146598 1 + 51301725 c i papAnu2.chr19 C 0 I 1306 s chlSab2.chr6 46853125 1 + 50890351 c i chlSab2.chr6 I 1319 C 0 s calJac3.chr22 45434301 1 + 49145316 c i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=6790.000000 s hg38.chr19_GL949753v2_alt 151202 3 + 796479 taa s ponAbe2.chr19 55961384 3 + 60714840 taa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727947 3 - 106955855 taa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020382 3 + 64156825 taa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043848 3 + 59248254 taa i macFas5.chr19 I 1305 C 0 s papAnu2.chr19 47147905 3 + 51301725 taa i papAnu2.chr19 I 1306 C 0 s chlSab2.chr6 46853126 3 + 50890351 taa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45434302 3 + 49145316 tga i calJac3.chr22 C 0 I 535 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=249798.000000 s hg38.chr19_GL949753v2_alt 151205 140 + 796479 aaatacaaagattagtctgtcatggtagcacgtgcctataatcccagctactaggggggctgagacaggaggattgcttgaacctgggagggagaggttgcagtgagccgagatcacgccactgcacttgagcTGTAAAA s ponAbe2.chr19 55961387 140 + 60714840 aaatacaaagattagtctggcacggtggcacgtgcctgtaatcccagctactaggggggctgagacaggaggactgcttgaacctgggagggggaggttgcagtgagccgagatcatgccactgcacttcagcTGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102727950 137 - 106955855 aaatacaaagattagtctggcatggtgccacgtgcctgtaatcccagctactaggggggctgagac---aggactgcttgaacctgggagggggaggctgcagtgagctgagatcacgccactgcacttcagcTGTAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020385 140 + 64156825 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatagcttgaacccgggagggggaggttgcagtgagccgagatcgtgccacttcacttcagcTGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55043851 140 + 59248254 aaatacaaagattagcctggcatggtagcacgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47147908 140 + 51301725 aaatacaaagattagcctggcatggtagcatgtgcctgtaatcccaggtactaggggggctgaggcaggaggatcgcttgaacccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagctgtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853129 140 + 50890351 aaatacaaagattagcctggcatggtagcacgtgcctggaatcccaggtactaggggggctgaggcaggaggatcgcttgaatccgggagggggaggttgcagtgagccgagatcatgccacttcacttcagcTGTAAAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45434305 535 + 49145316 I e panTro4.chr19 59085538 0 + 63644993 C a score=1354750.000000 s hg38.chr19_GL949753v2_alt 151345 624 + 796479 TAAACAAAAACGATGGAtcctgtgcattttaaggtgtttaggagcatccctggcccccacccacgacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacagttgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGCGTCATC--TATACCTggccagatgcagtggctcatgcttgtaatctcagcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaccagcctggtcaacacag---tgagacctcatctctatacattttttaaaaagt-aAAAAAAAAATAATAATAATACTTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcacgcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccctgcgtctactC----------------------------------------------------TTggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccatcctgggtgacagagcATCAAaatactaata s ponAbe2.chr19 55961527 619 + 60714840 TAAACAAAAACGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccccccactacatccgactagcaccttccagttacaacaacatgtctccagggattgccatgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTGTCATC--TATACCTggccagatgcagtggctcacgcctgtaatcccagcactttgggaggctgagacgggaggactgcttggggccaggagttttgagaccagcctggtcaacacag---tgagacctcatctctatatattttttaagaagt-aaaaa------aataataataattaaaaaattttggccgggcatggtgactcacgcctgtaatcccagcacgttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------accagcctggccaacatggtgaaaccttgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaagagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcATCAAaataataata i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102728087 617 - 106955855 GAAACAAAAACAATGAAtcctgtgcattctaaggtgtttaggagcatgcctggcctccacccactacatccgactagccccttccagttacaacagcatgtctccagggactgccatgtgtctcctcggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTCTAAACACTGGGGT-------GCTTTGACCTGACCTCAGCCCCAGAGC-TTTAAGCATCATC--TATACCTggccagatgcagtggctcacgcttgtaatcccagcactttgggaggctgagatgggaggactgcttgaggctaggag-tttgagaccagcctggtcaacacag---cgagacctcatctctatatattttttaaaaggt-taaaa------aa-aaaaTTAATTAAAAAATTTTggccgggcatggtgactcacgcctgtaatcccagcactttcggaggccgaggcaggtggatcacttgaggccaagagttcaag------accagcctggccaacatggtgaaaccctgagtctactc----------------------------------------------------ttggcacgagaatca----cttgaacccaggagatggaggttgcagtgagctgagatcacaacactgcactccaccctgggtgacagagcatcaaaataataata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60020525 630 + 64156825 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCAGTATA------cgggcatggtgattcatacctgtaatcccggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt--aaaaaaaa--aaaaaaattaattaaaaaattttggccagacatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgatactagcactagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i rheMac3.chr19 C 0 I 1075 s macFas5.chr19 55043991 631 + 59248254 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccacccactacatcccactagcaccttccagttaaaacaaaatgtctccagggatttccacgtgtctcctgggggt---gcagcagcagcacaactgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCACCTGTATACCTggccagatgcagtggctcatgcttgtaatcctggcactttggcaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcaacacag---cgagacctcatctctctgtattttttaaaaagt-aaaaaaaaa--aaAAAAATTAATTAAAAAATTTTggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcatctactc----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcaaaataataata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148048 632 + 51301725 taaacaaaaaggatgAATCCTGCGCATTTTAAGGTGTTTAggagcatccctggcctccacccactacaTCCCACTAGCACCTTCCAGTTAAAACAAAGTGTCTCCAGGGATTGCCACGTGTCTCCTGGGGGT---GCAGCAGCAGCACAACTGCCCCCAGTTGAGAAGCACTTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATacctggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgcgaACAGCCTGGTtaacacag---cgagacctcatctctctatattttttaaaaagtaaaaaaaaaa--aaaaaaattaattaaaaaattttggccaggcatggtgattcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtCTACTC----------------------------------------------------ttggcatgagaatca----cttgaacccaggaaatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacaaagcatcgaaataatacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46853269 635 + 50890351 TAAACAAAAAGGATGAAtcctgtgcattttaaggtgtttaggagcatccctggcctccactcactacatcccactagcaccttccagttaaaacaaaatgtctccagggattgccacgtgtctcctgggggt---gcagcagcagcacaattgcccccagttgagaagcactTGTGTAAACACTGGGGTGCTCTGGGCTTTGACCTGGCCTCAGCCCCAGAGC-TTTAAGTATCATCTATATACCTggccagatgcagtggctcacgcttgtaatcccggcactttgggaggctgagatgggaggactgcttggggccaggag-tttgagaacagcctggtcagcacag---cgagacctcatctctctatattttttaaaaagt-gaaaaaaaa--aaaAAAATTAATTAAAAAATTTTggccaggcatggtgactcacgcctgtaaccccagcactttgggaggccgaggcaggcggatcacttgaggccaagagttcgag------actagcctggccaacatggcgaaaccctgcgtctactc----------------------------------------------------ttggcatgagaatcatttgtttgaacccaggagatggaggttgcagtgagctgagatcacaccactgcacttcaccctgggtgacagagcATCGAaataataata i chlSab2.chr6 C 0 I 636 s calJac3.chr22 45434840 676 + 49145316 TAAAC---AAGGATGAgtcctgtgcgtg-taaggtgcttaggagca-ctgtgggctccacccactccatgcccctagtcccttccagttacaacaaaacgtctccaggtattgccccgcgtctcctggaggtgcagcagcagcagcagaatttcccccagttgagaagcgctTGTC-AAACACTGAGGTGCTCTGGGCTTTGATGTGGCCTCAGCCCCAGAGCTTTTAAGTATCATC--TATACCTggctgggcacagtggctcatgcttgcagtcccagcgctttgggaggctgagatgggaggactgcttggggccaggac-tttgagaccagcctagtcaacacaggcctaagtcaacatctctatatattttttaaaaact-aAAAA------AAAAAAATTAATTTAAAAACTTTggtcaggcttggtggctcaagcctgtaattccagcacttcgagaggctgaggtaggtggatcacttgaggccaagagtttgag------actagcctggccaacatggtgaaaccccacatctactaaagataaaaaaattagctgggcgtggtgtcgcacacctgtaatcccagctagttggcaggagaatca----cttgaacccaggatatggaagctgcagtgagctgacgtcgtgccactgcactccaccctggg-gacaaagcgtcaaaa-aataata i calJac3.chr22 I 535 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e panTro4.chr19 59085538 0 + 63644993 C a score=-570.000000 s hg38.chr19_GL949753v2_alt 151969 7 + 796479 ctaatac- s nomLeu3.chr10 102728704 6 - 106955855 ataata-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55044622 6 + 59248254 acaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47148680 5 + 51301725 -caata-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45435516 5 + 49145316 --aata-c i calJac3.chr22 C 0 I 748 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=4755.000000 s hg38.chr19_GL949753v2_alt 151976 11 + 796479 taatactaata s nomLeu3.chr10 102728710 10 - 106955855 -aaTAATAATA i nomLeu3.chr10 C 0 I 2356 s macFas5.chr19 55044628 10 + 59248254 -aataataata i macFas5.chr19 C 0 I 557 s papAnu2.chr19 47148685 10 + 51301725 -aataataata i papAnu2.chr19 C 0 I 171 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 151987 29 + 796479 ctaatactaatactaatactaataataat e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e ponAbe2.chr19 55962146 194 + 60714840 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e papAnu2.chr19 47148695 171 + 51301725 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=16934.000000 s hg38.chr19_GL949753v2_alt 152016 106 + 796479 aTCCTTCTTACTCCCAAAACTTACCCTTCCTGGGTCTTCCCCTTCCACATTTATCTAATTAAATTAAATTAAATTAATAATTATTTTTGTTTGttttttgtgtttt s ponAbe2.chr19 55962340 99 + 60714840 atccttcttactcccaaaacttactcctcctgggtcttccccttctACCTTTATCTaattaaattaaattaaattaa--attaTTTTTGtttgttgttt-----tt i ponAbe2.chr19 I 194 C 0 s papAnu2.chr19 47148866 94 + 51301725 ATCCTTCTTACTCCCAAAACTTACCCCTGCTGGGTCTTCCCCTTCCgcctt----taatttaatttaatt-gattaa--ttaattttggcttttttact-----tt i papAnu2.chr19 I 171 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e nomLeu3.chr10 102728720 2356 - 106955855 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=1113.000000 s hg38.chr19_GL949753v2_alt 152122 4 + 796479 tttg s ponAbe2.chr19 55962439 4 + 60714840 tttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731076 4 - 106955855 TCCG i nomLeu3.chr10 I 2356 C 0 s papAnu2.chr19 47148960 4 + 51301725 ttta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e macFas5.chr19 55044638 557 + 59248254 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=135518.000000 s hg38.chr19_GL949753v2_alt 152126 202 + 796479 tttgtttgtttttgagacagagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacaccattctcctgcctcagcctccccagtagctgggactacatgcacccgccgccacacccggctaattttttgtatttttagtagagacagggtttcaccgtgtta s ponAbe2.chr19 55962443 195 + 60714840 tttgtttgtttttgagaaagagtctcgctctatcacccaggctggagtgcagtggcgcgatcttggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagca-------ctacaggcgcccgccgccacactcggctaattttttgtatttttagtagagatggggtttcaccgtgtta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731080 202 - 106955855 TTAGtttgtttttgagacggagtctcgccctgtcacccacgctggagtgcagtgtcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgcgactacaggcgcccgctgccacacccggctaattttttgtatttttagtagagatggggtttcaccgtgtta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045195 186 + 59248254 tttattttattttgagacgaagtttcgctctgttgcccag----------------gtgatctcagctcactgcaacctctgcctcttgggttcaagtgattctcttgcctcagcctcctgagtagctgggattactggcgcctgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattg i macFas5.chr19 I 557 C 0 s papAnu2.chr19 47148964 195 + 51301725 ------tttttttgagatagagtctt-ttctgttacccaggctggagtgtagtggcgcgatctcagctcaccgcaagctctgcctcctgggttcatgctgttctcctgcctcagcctcccgagcagctgggactacaggcgcccgccacctcgcctggctaattttttgtatttttagtagagacggggtttcaccatgtta i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I e panTro4.chr19 59085538 0 + 63644993 C a score=103734.000000 s hg38.chr19_GL949753v2_alt 152328 95 + 796479 gccaggatggtcttgatc------tcctgacctt---gtgacccacccaccttggcctcccaaattgctgggattataggcatgagccaccgtgcccggc------------cTAt s panTro4.chr19 59085538 95 + 63644993 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaattgctgggattataggcatgagccaccgcgcccggc------------cTAt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962638 92 + 60714840 gccaggatggtcttgatc------tcctgacctt---gtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccgcgcccggc------------c--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731282 95 - 106955855 gccaggatggtctcgatc------tcctgacctt---gtgatccacccacctcggcctcccaaaatgctgggattataggcatgagccaccgtgcccggc------------cTAt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045381 116 + 59248254 cccaggctggtcttcaccatattgccctgacctcaaagtgatccacctgcctgggcctcccaaattgctgggattacaggtgtgagccaccgcgcctggcTATGAGtttctacttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149159 95 + 51301725 gccaggatggtcttgatc------tcctgacctt---gtgatccgcccgtctcggcctcccaaagtgctgggattacagacgtgagccaccgcgcccagc------------ctgt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e calJac3.chr22 45435521 748 + 49145316 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=415521.000000 s hg38.chr19_GL949753v2_alt 152423 328 + 796479 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gaccttggctcaccgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccatgcctggcTATGAGTT-CTACTTCTGttttttttttttttttttttttttt s panTro4.chr19 59085633 317 + 63644993 tttatttta--ttttgagacaaagtctctctctgttgcccaggt----------------gacctcg-ctcactgcaacctccgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccatattgccctgacctcaagatgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccaccacgcctggcTATGAGTTTCTACttct-----------ttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55962730 308 + 60714840 --TAtttta--ttttgagacgaagtcttgctctgttgcccaggt----------------gacctcggctcactgcaacctctgcctcccgggttcaag-tgattctcttgcctcagcctccctagtagctgggattataggcgcccgccaccatgcctagctaattttttgtatttttagtagagaaggggtttcaccatattgcccaggctagtcttcaccatattgccctgacctcaaggtgatccacctgcctgggcc-cccaaactgctgggattacaagtgtgagccactgcacctggctATGAGtttctacttct------------------ttttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731377 304 - 106955855 tttatttta--ttttgagacgaagtctcgctctattgcccaggt----------------gacctcggctcactgcaacttccgcctcccgggttcaag-tgattctcttgcctcagcttccctagtagctgggattataggcgcccgccaccacgcccggctaatttattgtatttttagtagagacggggtttctccatattgcccaggctggtcttcatcatattgccttgacctcaaggtgatccacctgcctgggcctcccaaactgctgggattacaagtgtgagccacc-------gcTATGAGtttctactttt------------------tttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55045497 294 + 59248254 ttttttttt--ttttgagacggagtctcgctctgttgcctaggctggagtgcagtggcgagatgccggctccctgcaacctccacctcccgggttcaag-ccattctcctgcctcagcctcccgagtagctgggactacaggtgcgcaccaccacgcccaggtaattttttgtatttttagtagagatgtggttgcaccatgttaacaaggatggtctcaatc------tcctgacctc---gtgatccgcctgcctcggcttcccaaagtgttgggattacaggcgtgagccaccacgcccggcc------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149254 311 + 51301725 tttatttta--ttttgagacgaagtttcgctctgttgcccaggt----------------gacctcggctcactgcaacctccgcctcttgggttcaag-tgattctcttgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccagctaattttctgtatttttagtagagaaggggtttctccatattgcccaggctggtcttcaccATATTGccctgacctcaaagtgatccacctgcctgggcctcccaaactgctgggattacaggtgtgagccaccgcgcctggctatgagtttctacttct------------------tttttttt i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45436269 268 + 49145316 tttattttagtttttgggatgaagtgtcgctcagtcgcccaggc----------------gacctcagctcactgcaacctccacctcctgggttcaagttgattctcttccttcagcctcctgtgtagctgggataacaggcaaccgtcactacgcccagctaactttttgtatttttagtagagaaggggttgcaccatattg------------------------ccctgacctc-aggcgattgacttgcctgggctacccaaaaggctgggattacaggcatgaaccacc-------------------TACtctt------------------ttgttc-- i calJac3.chr22 I 748 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I e rheMac3.chr19 60021155 1075 + 64156825 I a score=52018.000000 s hg38.chr19_GL949753v2_alt 152751 24 + 796479 ttttttttttgagacggagtctcg s panTro4.chr19 59085950 24 + 63644993 tttcttttttgagacggagtctcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963038 24 + 60714840 ttttttttttgagacggagtgtcg i ponAbe2.chr19 C 0 I 2 s nomLeu3.chr10 102731681 24 - 106955855 ttttttttttgagacagagtctcg i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60022230 24 + 64156825 tttttcttttgagacaaagtctcg i rheMac3.chr19 I 1075 I 2 s macFas5.chr19 55045791 24 + 59248254 tttttcttttgagacaaagtctcg i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47149567 24 + 51301725 ttttttttttgagacggagtctcg i papAnu2.chr19 I 2 I 293 s calJac3.chr22 45436537 24 + 49145316 gtttgtttttgagacagagtcttg i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=78679.000000 s hg38.chr19_GL949753v2_alt 152775 42 + 796479 ctgtcgcccaggctggagtgcagtggcgagatcccagctccc s panTro4.chr19 59085974 42 + 63644993 ctgtcgcccaggttgcagtgcagtggcgacatcccggctccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963064 42 + 60714840 ctgtcgcccaggctggagtgcagtggcgagatcctggttccc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 102731707 42 - 106955855 ctgttgcccagactggagtgcagtggcgagatcctggctccc i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60022256 42 + 64156825 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55045817 42 + 59248254 ctgtcgctcagggtggagtgcagtggcatgatctcaggtcac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47149884 42 + 51301725 ctgtcactcaaggtggagtgcagtggcatgatctcaggtcac i papAnu2.chr19 I 293 C 0 s calJac3.chr22 45436561 41 + 49145316 ctgtcgc-caggctggagtgcagtggcacaatctcggctcac i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I e chlSab2.chr6 46853904 636 + 50890351 I a score=403425.000000 s hg38.chr19_GL949753v2_alt 152817 149 + 796479 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacaccagggtaa-ttttttgtatttttagtagagacagcatgtcaccatgttggtcaggctggtctcgaac s panTro4.chr19 59086016 149 + 63644993 tgcaacctctgcctcccaggttcaggccattctcctgccccagcctcccgagtagctgggactacaggcacgcgccaccacaccagggtaa-ttttttgtatttttagtagagacagcgtgtcaccatgttggtcaggctggtctcgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963106 149 + 60714840 tgcaacctctgcctcccgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcatgcagcaccacacctggctaa-ttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtctcgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731749 150 - 106955855 tgcaacctccgcctcccgggttcaagccattctcctgcctcagcctcctgagtagctgggactacaggcatgcaccaccacaccagggtaatttttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtcttgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022298 147 + 64156825 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttggatttttagtagagacagggtttcaccatgctggttaggctggtcttgaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55045859 147 + 59248254 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47149926 147 + 51301725 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcacaagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854540 147 + 50890351 tgcaacctccgcctcctgggttcaggcgattctcctgcctcagcctcaccagtagctgggattacaggtgcgcacca-cacgtctggctaa--tttttgcatttttagtagagacagggtttcaccatgttggttaggctggtcttgaac i chlSab2.chr6 I 636 C 0 s calJac3.chr22 45436602 148 + 49145316 tgtaacctctgcctcccaggttcaagcgattttcctgcctcagcctcctgagtagcttagactacaggcgcgcgccaccatgcccagctaa--tttttgtatttttggtagagacagagtttcaccatgttggccaagatggtctcgatc i calJac3.chr22 C 0 C 0 e mm10.chr7 3678989 4687 + 145441459 I e canFam3.chr1 19639829 2038 - 122678785 I a score=1580714.000000 s hg38.chr19_GL949753v2_alt 152966 499 + 796479 tcctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgcacccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacacagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGctgactttacagaagtagcaa-------------ctgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcaaaacca s panTro4.chr19 59086165 512 + 63644993 ccctgacctcatgatccacctgcttgggcctcccaaagtgctggg--attccaggc--atgagctgccgcgcccgg-c-tgagtttctgcttctaaaggctgcacagataacagtgtcaagcacagagtctccactcgagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcacatttagtccttctatctacctatgaaaccagtaataaatagcattcactccattcaacacttgaggcaactaagaggtcaactaactcctcaaggtgtctccgtaacctggacggccaagattccaggaaggctggctattgagtccACAGGACTCAGTACATTGCTTCTGCTGAGTGAGGCTGACTTTACAGAAGTAGAAAacagaagtagaaactgaggccccgagagggggaacgattttacacc----ggcatgctgccactataattagaggcagggcAAAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963255 500 + 60714840 tcctgacctcataatccacctgcttgggcctcccaaagtgctggg--attccagga--gtgagctgccacgcccggcc-tgagtttctgcttctaaaggctgcacagataacaatgtcaagcacagagtctccactcaagaaatattggAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcaggcctcacattaaatacacttcacattttatcacatttagtccttctatctacccgtgaaaccagtaataaatagcattaactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggacggccaagattccaggaaggctggctattgagtccACAAGACTCAGTACATTGCTTCTGTTGAGTCAGGctgactttacagaagtagaaa-------------cggaggccccgagagggggaacgattttacacc----agcatgctgccactataattagaggcagggcAAAACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102731899 498 - 106955855 tcctgacctcatgatccacctgcttgggcctcccaaaatgctggg--attccaggc--ctgagctgtcgcgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAATAATGTCAAGCACAGAGTCTCCATTCAATAAATATT-GAAGAATGAAAAACaataaaaatgaatacatagcacgcacttacctgtcatgcctcacattaaatacatttcacattttatcacattcagtccttctatctacctatgaaaccagtaataaatagcattaactccatttaacacttgaggaaactaagaggtcaactaactcctcaaggtttctccataacctggacagccaagattccaggaa-gctgcctattgagtccACAGGACTCAGTACATTGCTTCTGTTGAGGGAGGctgactttacagaagtagaaa-------------ctgaggcccggagagggggaacgattttacacc----agcatgcggccactataattagaggcacggtaaaacca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60022445 498 + 64156825 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAATCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagttcttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046006 498 + 59248254 tcctgacctcatgatccacccacttgggcctcccaaagtgctggg--attccaggc--gtgagctgccgtgcctggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATTAAGCGCAGAGTCTCCACTCAAGAAATACTGGAAGAATGAAAAACaataaaaacgaatacgtagcacgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtccttctatctacctatgacaccagtaataaatagcattcactccatttaacacttgaggcaactaagaggtcaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagagggggaatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150073 498 + 51301725 tcctgacctcatgatccacccgcttgggcctcccaaagtgctggg--attccaggc--gcgaGCTGCCGTGCCCGGCC-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGCGCAGAGTCTCCACTCAAGAAATActagaagaatgaaaaacaataaaaacgaATACGTAGCACGCACTTACCTGTCAGGCCTCACATTAAATACATTTCACATTTTATCGCATTTAGTCCTTCTATCTACCTATGACACCAGTAATAAATAGTATTAACTCCATTTAACACTTGAGGCAACTAAGAGGTCAACTAACTCCTCAAGGTTTCTTCATAACCTGGATGGCCAAGATTCCAGGAAGGCTGGCTGTTGAGTCCACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGCTGACTTTACAGAagtagaaa-------------ctgaggcccagagagggggaATGGTTTTACACC----AGCATGCTGCCAC--TAATCAGAGGCAGGGCAAAACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46854687 498 + 50890351 tcctgacctcgtgatccacccgcctgggcctcccaaagtgctggg--attccaggc--gcgagctgccgtgcccggcc-TGAGTTTCTGCTTCTAAAGGCTGCACAGATAACAATATCAAGTGCAGAGTCTCCACTCAAGAAATACTGGAAGACTGAAAAACaataaaaacgaatatgtagcatgcacttacctgtcaggcctcacattaaatacatttcacattttatcgcatttagtcattctatctacctatgacaccagtaataaatagcattaactccatttaacacttgaggcaactaagaagttaactaactcctcaaggtttctccataacctggatggccaagattccaggaaggctggctgttgagtccACAGGACTCAGTACATTGCTTCTGTCAAGTGAGGctgactttacagaagtagaaa-------------ctgaggcccagagaggcgggatggttttacacc----agcatgctgccac--taatcagaggcagggcaaaacca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45436750 487 + 49145316 tcttgacctcgtgatccacccgcctcggcctcccaaagtgctggg--attacgggc--ttgggc--caAAGCACGGCCATGAGTTTCTACTTAC-AAGGCTGCGCCAAAAACAACGTCTAGC----AGTCTTCACTCAAGAAACATTGGAAGAATGAAAAAAaataaaaactaatagatggcaggcacttacctgtcaggcctcacattaaatacatttcacattctatcgcatttaatcattttatctacctatgaaaccagtaataaaaagcattaactccgttgaatattcgaggcaaccaagaggtcaactaacttctcagggtttctccatcacctagacggctgaaattccaggaaggctggctactgagtccACAGGTCTCAG----TTGCTTCTGTAGACTAAGGctgactttacagaagtagaaa-------------ccgaggctccatgatggggaacta-tttacacc----agcgtgctgccac--taattagaggcagggcaaaacca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19641867 472 - 122678785 TCCTGACCTCAT-------CTGCT---GGTTCTGGGAAagctgagtaacactaggcaggttacctaaccctctgagcc-tcag-ttctacatcataaggttgtaaacatagcagtatctggcacaaagttttcactcaagaaatataagatgaatgatggaa---aAAATCTAATGTATGGT-CACACCCACCTGGCGGGCCCCACAGTGACTACATTTCACACTttatctcccttcatcctcacatcaaactatgaagcaggtaac----atcatgacccccattcaggagttgaggacac----aggtcagctcattcattaaggtttctctgtagttggtagggccaagattccagaaagtctgacca--gagtccatAGGATTCAGTACATTGCTTCTGTCGAATGAGGTTGACAGGacggaagtagaaa-------------ctgaggcccagagagggggaatgatttacctcccagaggaatgc--------gaatcaatggcagggcaaca--- i canFam3.chr1 I 2038 C 0 e mm10.chr7 3678989 4687 + 145441459 I a score=5011941.000000 s hg38.chr19_GL949753v2_alt 153465 1304 + 796479 ggctaaacaaactacaattcccatgAGCCTCCGGGGGCAGGGGCCCAGCCAGGGACGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAGCAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGTAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAACTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAATGCCTAGGATGTTTAGAAAGG-CTTT---TAGGAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACACT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCCCGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG s panTro4.chr19 59086677 1303 + 63644993 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGACACTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCCGCAGTGTCACCTGAGACTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGAAGGTGGGTGG-GCTGGGTGGTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCCACCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCGCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GATTATTGGAGAAGTGTCACCTCTAGCAATA-CAGTGGCTCCCTCATCACTCATGTCGACAGCCCCAGCAGTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACAGGAGGGGAGCCATCCTTTAGGAGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGTCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55963755 1304 + 60714840 GGCTAAACAAACTACAATTCCCATGAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGTAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGAGGGCTGACTCACCGCAGGACGTAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACTGG-----------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCGCTCCCAACGCCTGCTAGTGTCCCAGCCCCAGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCCTCTGGCTGTCAGAGTTGCTAGGGCAACAAGGGAGGGTGGCC--GAGGGTGCCTGC--AGGGGGGGAAGATGGGTGG-GCCGGGTGCTACAGTTCACTGACAATGGGGTTCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATAGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------GT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTTCAAGGATGGTCCCTTCTAAATTGTG-GAACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGTATTCCTTAGCAACAAGGCCTAGGATATTTAGAAAGG-CTTT---TAGAAAGGGGCTTTT----TTCCTGGTCGCAGT-GACTGTCGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTGGTGTCGACAGCCCCAGCAGTGGCAAACACT----GGCCCATATGAAGCCTTGGTGGCGTCTGATGACGGGAAGGGAGCCATCCTTTAGGGGTGAGGACCGAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGCTTTACTAGGGGG-ACATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAAGTCACGTGGGGGT-------GTCACTACCCCCCACAACAGAATGGCAGTTTGTGACGACTAGGGG----A-----CAACCCTAGCAGGGAGTAGTAGTTCATCATTTACATCAACAGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGA-GGGAAAGCTGACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCCGGTTGCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102732397 1296 - 106955855 ggctaaacaaactacaattcccatgagcttccGGAG-CAGGGGCCCAGCCAGGGGAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGTAGTTCTGCAGTGTCACCTGAGGCTGGGCGGGCTCACTCACCGCAGGACATAGGAACGGGTAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCTGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAAGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGATGCCTGCTAGTGTCCCAGCCCCGGATGCTAACGAAGGGATCCTGGCCAGGCAATCGCCCTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AAGGGAGGAAGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGGTTCTTCCTCTTTTGCTACCTAATAGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCGAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-AGACACTGCAGTTGCCAGGGAAGTTGTGGTTATCATCCCTAATAACAAGGTGCTTCACGGTTGCTAGGGAGATGTTCCAGGCGCCAGTGGGGTCCCTATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGGCTTTC----TTCCTGGGCGCAGT-GATTGTTGGAGAAGTGTCGCCTCTAGCAATA-CAGTGGCTCCCTCATCACTTGTGTCGACAGCCCCAGCACTGGGAAACATT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGACGGGAGGGGAGCCATCCTTTACGGGTGAGGACCGAACAGATTTAGAAAAACCTTCAACTCCTGCTTGGCTTTACTAGGGGG--CATCCTCTCTCTAGCAGCTGGAGGTCAGGGCACGGTTATTAGGGCAGTGGTAACAAATTCACGTGGGGCT-------GTCACTA-CCCCCACAACAGAATGGCAGTTTGT---GACTAGGGG----C-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCAACGGGCTGTTCCCCCAGCCGCAGTCCAAGCCCCTGG-GGAAAGGCTGACTGCAGCTGCCAGGAACAGAAGGGCAGTCTACTCCTGGCTGCCGG i nomLeu3.chr10 C 0 M 811 s rheMac3.chr19 60022943 1300 + 64156825 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCTCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGGGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCAGGTGGTACAGTTCACTGACAATGGGCTGCTGCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACGCAAGAGCAGTCTACTCCTGGTTGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55046504 1300 + 59248254 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGTTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTGCTTCTTCTTTTGGTACCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATGTTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTAGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATG-CAGTGGTTCCCTCGTCACTCATGCCGACAGCCCCAGCAGTGGGAAACGTT----GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGAGCAGTCTACTCCTGGTTGCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47150571 1296 + 51301725 GGCTAAACAAACTACAACTCCCATGAGCCTCTGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCTGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTA-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGT--AGGGGAGGACGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATgggcttcttcttcttttggtaCCTAATGGGGCCTGCCACAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TGTATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATTGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCATCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTAGAAAGG-CTTT---TAGAAAGGGACGTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCACTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTAGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTGTCTAGCAGCTGGAGATCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGATGGGCTGTTCCCCCAGCAGCAGTCCAAGCCCCTGG-GGGAAGTCTGACTGCAGCTGCGAGGAACACAAGGGCCGTCTACTCCTGGTTGCCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46855185 1302 + 50890351 ggctaaacaaactacaactcccatgAGCCTCCGGGG-CAGGAGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCTTGCTGGGTGATGTAGTTCTGCAGTGTCACCCGAGGCTGGTGGGACTCACTCACCGCAGGACATAGGAACGGGCAGGTGCGCTCTTGTAGATATACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCATCGCGCACCCGCACGCAGAAATCTGTGCCGTAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCACCTTCTCCGGACT-------------GGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCTGGATGCTAAGGAAGGGATCCTGGCCAGGCAATGGCCTTCTGGCTGTCAGACTTGCTAGGGCAACAAGGGAGGGTGGCCCAGAGGGTGCCTGTAGAGGGGAGGGCGATGGGTGG-GCCGGGTGGTACAGTTCACTGACAATGGGCTTCTTCTTCTTTTGGTACCTAATGGAGCCTGCCGCAGCCATGAAAAGCCTTGAAGGGCTATGGTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TTAAGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAATCGTC-GGACACTGCAGTTGCTAGGGAAGTTGTGATTATCACCCCTCATAACAAGGTGCTTCATGGTTGCTAGGGAGATGTTCCAGGCACCAGTGGGGTCCCCATGATCTTTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAAGGCCTAGGATGTTTGGAAAGG-CTTTTTCTTGAAAGGGACTTT-----TTCCTGGTCGCAGT-GATTGTTGGAGAAGTGTCACTTCTAACAATA-CAGTGGTTCCCTCGTCACTCGTGCCGACAGCCCCAGCAGTGGGAAAC-------GGCCCATATGAAGCCTTGGTGGCCTCTGATGATGGGAGGGGAGCCATCCTTTAGGGGTGGGGACCCAGCAGATTTAGAAAAACCTTCAATTCCTGCTTGGATTCACTGGGGGG-ACATCGTCTCTCTAGCAGCTGGAGGTCAGAGCATGGTTATTAGGGCAGTGGTAATAAATTCACGTGGGGGT-------GTCACTA-CCCCCACAACAGAATGGCAGTTGGTGACGACTAGGGG----A-----CAACCCTAGCAGGG---AGTAGTTCATCATTTACATCGACGGGCTGTTCCCCCAGCTGCAGTCCAAGCCCCTGG-GGGAAGGCTGACTGCAGCTGCGAGGAACACAAGGGCAGTCTACTCCTGGTTGCCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45437237 1282 + 49145316 ggctaaacaaactacaactcccgtgAGCCTCCGGGG-CAGGGGCCCAGCCAGGGAAGCTGCAGGCTACCCTGG----GGCCTGCTGGGAGATGCGGTTCTGTAGCGTC-CCTGAGGCTGGGCGGGCTCACTCACCGCAGCACATAGGAGCGGGTCGGTGCGCTCTTGTAGATGTACTGCGCCAGCCACCACTGCACCGTCATGTTCCAGTACCGCATGCCCTCGCGCACCCGCGTGCAGAAATCCGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCATACTCCAGGGAAGCCGCCTTCTCCGGACT--------------GGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCCTGCTAGTGTCCCAGCCCCGGATGCTAAGGAAGGGATCCTGGCCAGGCAGTGGCCCTCTGGCTGTCAGATTTGCTAGGGCGACAAGGGAGGGTGGCCGAGAGGGTGCCTGT---CGGGAGGAGGAGGGGTGG-GCCGGGTGGTACTGCTCACCGACAGCGGGGTTCTTCTTGCTTTGGTAACTAACGGGGCCTGCCAGAGCCATGAAAAGCCTTGAAGGGC--TGCTTGCTAAGCTAT-GAGTCCT-------------------------------------------------TT-AGCAACCAAGCTCAG-TATATTCAGAGAAGCCTCCAAGGATGGTCCCTTCTAAACTATT-GGACACTGCTGTTGCTAGGGAAG-------TATCTTCCCTAATAACACGATGATTCACGGTTGCTAGGGAGATGTTCCAGTCGCCAGTGGGGTCTTAATGATCTCTGTTGCTAAGGAAAAGGCATTCCTTAGCAACAGGGCCCAGGATGTTTAGAAAGG-CTTT---TAAAAAAGGGCTTTT----TTCCTGGTCCCAGC-AA----TGTCGAAGTGTCACCCCTAGCAATA-CAGTGGCTCTGTCGTCACTCGTGCCAATAGCCCCAGCAGTGGGAAACGCT----GGCCCACATGAAGACCTGGTGGCCTCTGATGATGGGAGGGGAGCCAT-CTTGAGGAGTGGGGGCCAAGTGGATTTAGCAAAGCCTTCAATTCCTGCTTGGCTTTTCTGGGGGGGACATCCTATCTCTAGCAGCTAGAG-TCAGGGCATGGTTATCAGGGCAGTGGTCATAAACTCACGTGGGGGT-------ATCACTA-CCCCCACAACC-AATGGCAGTTTT---CGACTAGGGATGGCA-----CAACCCTAGCAGGG---GATAGTTCATCATTTACATCAACAGGCTGCTGCCCCAGCCACAGTCCAAG-CCCTGG-GGGAAGGCTAACTGCAGCTGCCAGGAACACAAGGGCAGTCTACTCCTGGTTGCCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3683676 1222 + 145441459 GGCCCAAGAAACTACAATTTCCATAAGCCTTGGGCC-TTAGGGCCCAGCTAGAGAAGCCCCAGACTACCACAGGTCAGTCATACTGGCAGATAAAGTTCTGCACTGTC-TCTGATACCAGGTGGGCTCCCTCACCTCAAAACGTAGGAGCGGAAAGGTGCGCTCTTGTAGATGTACTGTGCCAGCCACCACTGCACGGTCATGTTCCAGTATCGCATGCCATCCCGCACACGCACGCAGAAGTCTGTGCCATAGCAGTCGATGTTACGGATGGTCTCATAGTCATACTCCAGGGAAGCTGCAATCTCCGGACt--------------gggggtgg-gggtgggggtggagatgaggatggggACAGACATGCAGCTCAGCCAGGCCC-CTCCTGACACCTGCTTCTGTCCCAGCCC--GATGCTAAAGAGGGGGTTCTGGACAGGCTGT----------------GACTTTTGAGGGCCACTGGGTAGGATAGGCCAGAGGGAGTCGGG--------------TAGGTGG--------GGCACAATTCACTAATAGTG------CTGTGCTCTTGGTAACTAGTAGGGCCTGATACAGCCACAGAAATCCTTGGAGAGCTATGGTTGCTAAGCTATCAAGTCCA-------------------------------------------------CT-GGCAACCAAGCTCAGAAATATTGAGAATAGCTTCCAAGTATGGTCCCTTCTGAACTGTG-GGGCAGAGCAGCTGCCAGTAAAGT----------ATCCACTCTAAAAAGGTGGTTCACGGTTGCTAGGGAGATATTCTAGGCCTCG--TGACTCTCAATGATCTCTGTTGCTAGGGAAAAGGCATTCCTTAGCAACAAGGCCCAGGCTGTTCAGAAAAATCTTT---TCAGAAAGGACTTCT----TCCCTGGTCCCTTTCGATTGTTCGAGAAGTGTCCCCTCCAGAAATATCAGAGGTTTTCAGATCTCCGACACCCATACTGTCAGCTATCGATAAAGATGCTAGGCCTATGTGAATGTTCAGCGTCTTCTGGACATGGGAGGGGGACT---------------------TGTAGATTTAAAACAGCATTTAATCTCTGCCTGACTTCACT-GCAGG-ACACCCTCCCTCTAGCAGTGAGTGGTTGATCCATGGTTACTAGGGCAGTGGTAATCAGTTTATATGGGGTGGGGGGCAGCCATTA-CCAC--CAACAGGATAA-------TGACAACCGGGGA-GATA-----CAACCCTACCAAGG---AGTGATCTACAATTTA---GGAGAGGCTG------------CAGTCCCATTCCCCAGCAGGAAGGCTGACAATGGATTCTAGAGACG--------GTTCACTACTGGTTGCTAG i mm10.chr7 I 4687 C 0 s canFam3.chr1 19642339 1336 - 122678785 gcctccagaaactacaactcccgtgactcTATTGGG-AGGAGGCCCGACCGCGGAGCCGGCAGGCAGCCCCAA----GTGCTGCCGGAAGATGTAGTTCCG-AGTTTT-CCCAAGGCGGGCGGG-----CTCACCTGAGAACATAGGAGCGGGCAGGTGCGCTCTTGTAGATATACTGTGCCAGCCACCACTGCACTGTCATGTTCCAGTACCGCATGCCATCCCGCACCCGCACGCAGAAGTCAGTGCCATAGCAGTCGATGTTGCGGATGGTCTCATAGTCGTACTCCAGGGAAGCCGCCTTCTCCGGACTGGGGGTGGGGGGTGGGGGGTGGAGGATGAGGGTG-----------GGGGACAGACATGCAGCTCAGCCAGGCCCCCTCCCGACGCTGGCTACTGTCCTAGCCCCAGACACTCAGGAGGGGATCACGGCCAGGCAATAGC--TCTGGCTGTCACATTTGCTAGGGCAACAGGGTTGGGGC-----GGGGGGGCTTTT--CCGGGACTAAGACTAGTGGAGGTGAGGGGCACAGTTCACTGACAATGGGG---TCCTCCTCTTGGTAAC-----AGGGCTGCAACAGCAAGGAAGAGCCTGGAAGAGCTACAGTTGCTAAGCTAT-GAGTCCTTAGCAACCTGATCCTTCACTGGTCTCTGATGCTAGGGAAAGGCCATTCCTT-AGCAACCAAGCTCAC-TATATTCCGAGAAGCTTCCAAGTATGGTCCCTTCTAAGTGGGGAAGATACTGTGGTTGCTAGGGAAG-------TAGCATTCCTAACAATGAGGTGGTCTGTGGTTGCTAGGGAGATGTTCT-GACCCATGTGACACCAGGACAGTCTCTGTTGCTAGAAAAAGGGCATTCCTTAGCAAAAAGGCCTGGGATGTTTAGAAATG-CTTC---CAGAAAGGGCCTTTCCTGGTTATTGGTCCTA-T-GATGACTTAAGAAGTGTCATCTCCAGCAACA-CGGTGGTTCCTGGATCCCTGGTGTCAACATCCCCAACAGTGGTGAACATTCTG-CACCCATCTGAGCCGTTGGTAGTTTCTGATAATGGGATGGGAGCCATCTATTAAAAGTGGGG-CTCAGTAGATTTAGAAAAGCCTTCAGTTTCTGCTTGACATTTTCTGGGAG-ACA--CTCTCTCTAGTAACTGGAGGTCCACTCGTGGTTACCAGGGCAGTGGCTG-AAATTCGTTTGGGGGT-------GCTACTT-CCCCCTTAATGGAATGGCTGTCTGTGACTACTAGGGG----ATGCCCCAATCCGGGCAAGG---AGGAATTCATAATTTACATAGACAGGCTGCTTTGCC-----CAGCCTCAGCCCCAGG-TAGAAGGCCACCCATGTTTGCTAGGAACAGTGGGGCAGTCCATTCCCAGTTGCTAG i canFam3.chr1 C 0 C 0 a score=464674.000000 s hg38.chr19_GL949753v2_alt 154769 183 + 796479 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCCG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CTGTAGTT s panTro4.chr19 59087980 183 + 63644993 GGGTGCCATCTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTG---------GGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCACAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGGGTAA-------CTGTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965059 183 + 60714840 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAGGAGAGTCCACAGCTA-TGGC-------CGTGCGACTTGCCTAGCAATGCAGGTGCTA---------GGGGGTGGAGCCTCTCTGGCAACCAGGGTCAACCCGTAGTTTCCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGACA-------CTGTAGTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60024243 190 + 64156825 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047804 190 + 59248254 GGGTGCCATTTCCCTAGCAACACGGGGGCAATGCTTCCTTAGCCACAAGAGAGTCCACAGCTA-CGGC-------CGTGCTACTTGCCTAGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47151867 196 + 51301725 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGTCACAAGAGAGTCCACAGCTA-TGGCCGTGCTACGTGCTACTTGCCTAGCAATACCggtgctgg--ggggt-gggggtggagccTCTCTGGCAACAAGGGTCAACCCATAGTTACCACGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCATAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856487 190 + 50890351 GGGTGCCATTTCCCTAGCAACACGGGGGCAATACTTCCTCAGCCACAAGAGAGTCCACAGCTA-TGGC-------CGTGCTGCTTGCCTTGCAATACCGGTGCTGG--GGGGTGGGGGGTGGAGCCTCTCTGGCAACAAGGGTCAACCCATAGTTACCAGGGGGAGGTTTGGCTTCCTTAGCAACAGTGTAA-------CCGTAGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438519 181 + 49145316 GGGTGCCATTTCCCTAGCAACACAGGGGCAATACTTCCTCAGCCACAGGAGAGCCCACAGGTG-TGGC-------CATGCGACTTGCCTAGCGATGCCGGT--TG---------GGGCATGCAGCCTCTCTGAAAACTAGGGTCAACCCATAGTCACCAGGGGGAGGCCTGGCTTCCTTAGCAACAGTATAA-------CTGGAGTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3684898 157 + 145441459 GGATACCATTTCCCTATCAACA-AGGACTGATGCTTGCTAAGTAGTAAGAA---CCGTAGTTACTAGT-------TTTGTGACGTTCTCAGCTATGATGGCGCTG---------GCGCTTGGGGTAGCTTTACTGGTAAAGGGAAAGCCTCAGCAATCGGGG-----------------------AAGACAA-------CCGTGGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19643675 187 - 122678785 GAGCATCATTTCCCTAGCAACACAGGGGCAACACTTCCTTAGCAACAAGAT-GCCCCTAGTTACTGGC-------AGTGTGACCTACCCAACAACTAAAGAAAGGGGTGAGGTGAGGGCTGCAGCAT---TGCCAACAA-GGTCACTCCATAGTTACCAGGGTATG--------TCCTTGGCAACGGTAGGAAAGTGACCTGCGGTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102733693 811 - 106955855 M a score=1804407.000000 s hg38.chr19_GL949753v2_alt 154952 529 + 796479 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----ATCTTTTCCCTACCGACAGGGGCTGGCAGGCCATGGTTGCCGAGGGGGCGACAC s panTro4.chr19 59088163 529 + 63644993 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCCGCTATGTGAGGACATCCCAC--GGGGTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGAGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGTAAAAAGGAGGTGAGCTACTGTTGCCAGGGATCCTGCTTCCCTAGCAAATAGTGGCATTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTCTGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCACACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGCCAGTACCAGGG----ATCTTTTCCCCACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965242 529 + 60714840 GGTAGGAATGGCGTGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTG----CAGAGGGCTGCTGAGGGCTGCTATGTGACGACATCCCAC--GGGCTGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGTGGCGTTCT-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT-GGGGGGTGACACTTACGTGGCAACAGAGGGTTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTAAGGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102734504 514 - 106955855 GGTAGGAATGGC-TGCCCTCT---GC-T-GGGAACAGCACTGGGCAGGGATT-GAAATCGCTATTTCCTTG----CAGAGGGCT----------GCTATGTGAGGACATCTGAC--GGGGTGGAGCA---GTGCTACCTCCTAGCAACAAAAG-GGGCAGTGCAGGGGGTGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGTGGCGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTAGCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCTGGGGGGGTGACACTTGCGTGGCAACAGAGGTGTGGCACAGGGT---TAAGTCACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGTGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCTGTGGTTGCCAAGGGGGCGACA- i nomLeu3.chr10 M 811 C 0 s rheMac3.chr19 60024433 535 + 64156825 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GTGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTACCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55047994 535 + 59248254 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCACATGGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTCCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGCCGTGGTTGCCAAGGGGGCGACAC i macFas5.chr19 C 0 I 6096 s papAnu2.chr19 47152063 533 + 51301725 GGTAGGAATGGCATGCCCTCT---GC-TGGGGAACAGCACTGGTCAGGGATTGGAAATTGCTATTTCTTTGCAAACAGAGGGCAGCTGAGggctgccatgtgaggatatcCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTgcagcaac--agagcaaaacttctGGCAAAAAGGAGGTGAAGTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAATAGCAGTATTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGGGTTGCTAGGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46856677 532 + 50890351 GGTAGGAATGG-ATGCCCTCT---GC-TAGGGAACAGCGCTGGTCGGAGATTGGAAATTGCTATTTCCTTGCAAACAGAGGGCAGCTGAGGGCTGCCATGTGAGGATATCCCAC--GGGATGGAGCA---GTGCTAGCTCCTAGCAAC-AAAG-GCGCAGTGCAGGGGGAGCCATATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAAAAGGAGGTGAACTACTGTTGCTAGGGATCCTGCTTCCCTAGCAAACAGCAGTGTTCC-GTTGCTAGGGAACCGTTTCCCTAGCAACAGAGGGT-GA---CCCACCACTACCAGAGGATGGCATCCCCAGCAAGCAGGAACAACCTGGTTCT-GGGGGGTGACACTTCCGTGGCAACAGAGGGATGGCACAGGGTTGCTAAGTTACCA----CCTTTTCCTAGCGACAGGGGG--------CAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCAGTACCAGGG----GTCTTTTCCCTACCGACAGGGGCTGGCAGGTCGTGGTTGCCAAGGGGGCGACAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45438700 490 + 49145316 GCTAGGAATGGCATCAGCTCT---GC-TGGGTAACAGCA---GGTGGGGATTTGAAATTGCTATTTCCTTT----CAAAGAGC--------GCAGCTACTTGACCACATCCCAT--GAGATGGAGGA---GGGCTAGCTCCTAGAAAC-AGAG-GGGTGGTGCAGGGGGTGCCGTATCTGCAGCAAC--AGAGCAAAACTTCTGGCAAGAAGGAGGTGAACTACTGTTGCTAGGGACCCTGCTTCCCTGGCAG--AGTGGTGTTCG-GTTGCTAGGTAACTGTTTCCCTAGCAACAGAGGGT-GA---CCCGCCACTACCAAAGGATGGCATCCCCAGCAAGCAGGAACAATCTGGTTCT--GGGGGTGACACTTCCGTGGCAACAGAGGGGTGGCACAGTGTTGCTAAGTTACCA----CATTTTCCTAGCAATGCGGGGGGGGGGTTCAGTTCACCATACTGCGGGGTGACAAGCGCTAGCAACAAGGGGC-ATCTGTCATTACCAGGG--TTTTTTTTTCCCTATCGACAG----------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3685055 503 + 145441459 GCTGAGAAAGG--TGCTCTCCACAGC-TGGAGGAGAGCA---GCCAAAGAT--------GTTACTTCCTTACA--AATAGGGCAACTGGGAGGTGCTGTGTGAGAACATCCCAT--GG---TGAGC-----TGCTCGCTCTAAGCAAG-GCAG---GCAGTTCA--------CAAACAGGCACAAAC----AGCAGGGCTCTCAGCAGTAAG-----GAACCAAGGTTGCTAGGGATATAGCATTCTCAGCACA-GGGGCTGTTCA-ATTGCTAAGGAATGGTTTCCCTAAACACAGATGATGGA---CCCACTACTACCAAAGGATAGTATCTCTAGCAACTGGGAACAGCCTGGATCT--TGGGGTGACTCTTCCATAGCAACACAGGGTAAGCATGTGGTTGCTAAGATACTATTTTCCTTTCCCTAGCAATAGAGGA--------CAATTAGCCATACTGAGGGGTGACAAAT----GCAACAAGGGGCAATCTGTAGGTACCAGAAACACATAGTTTCCCTAGTGGCCAGGGAAGGCAGGTGATAGTCACCAGGGGGGCAATAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19643862 502 - 122678785 GCTAGGAGTGCCATCCCCTCT---GTGCAGAGGGCAGCA-TGGTCAGGGAT--------GCCATTTGCTTA----GAAGGTGCA------GGCTGCT-----AGTACAGCCCAT--GGTTGGGTGTGTGTGTGCTGGCTTCTAGCCAC-AGAGAGAGGTTTAAAGGGGATGCTATTTACACAGCAATGAAAAGCAAGTCTTGTGGCTGGAAGG-GGCAGGCCACGGTTACTAGGGA-AGTGCTTCTCTGGCATAGAGGGGCAGTCTAGTTGCCAGGGTACCATTTCCCTAGCAACAAAGGGT-GGGGCCCCATCACAGCCCAAAGATGGTATCTGGAGTAACCAGGAACAACCGAGTTAC--CAGGGTAACACTTCCATGGCAACAGAAGGGCAGTGCATGGTTGCTAAAAGACCATCTTCCCTCTCCTAACAACAGAGAG--------CAGTTCGCCATCCCAAGAGGTGACAAGCAGTAGC-ACAAGGGGC-AGTGGAAGGTATGGGGA----GTATTGCTCCCTAGGACAGGGGTAGGT------------------GGGCGACAC i canFam3.chr1 C 0 C 0 a score=171233.000000 s hg38.chr19_GL949753v2_alt 155481 59 + 796479 TCTGCTCA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCGGCTAGGGG s panTro4.chr19 59088692 59 + 63644993 TCTGCTAA---AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965771 60 + 60714840 TCTGCTAA-C-AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735018 56 - 106955855 -CTGCT-----AAAAGGTGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60024968 61 + 64156825 TCTGCTAA-CAAAAAGATGGTGGCCCTAGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47152596 61 + 51301725 TCTGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857209 61 + 50890351 TCAGCTAA-CAAAAAGATGGTGGCCCTGGCCCCTTGCTCCCCGCTCTCCTCCCTGCTAGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439190 58 + 49145316 ----CTAAACAAAAGGGTGGTATCCCTGCCCCCTTACTCCCCGCTCTCCTCCCTGCTAGGGG i calJac3.chr22 C 0 I 584 s mm10.chr7 3685558 52 + 145441459 GCTGCCAA-C-CACTGCTGGTAGCCC--------TACACCCTGCTCCCTTCCCTACTAGGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19644364 60 - 122678785 TCTTCTGA-C-AACAGGTGATGAACCTGCTCCCTTGCTCCCCACTCTCCTCCCTGCTAGGGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=1522570.000000 s hg38.chr19_GL949753v2_alt 155540 371 + 796479 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAggcgggcgggcagcgggcgggcgTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACTGCCCC s panTro4.chr19 59088751 371 + 63644993 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACCGCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55965831 371 + 60714840 CAGAGCCTGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCGTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAAGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735074 371 - 106955855 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTGGGGCCGCCTCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCAGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGACGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGAGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60025029 371 + 64156825 CAGAGCCAGCCCTGGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGACGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i rheMac3.chr19 C 0 I 1155 s papAnu2.chr19 47152657 371 + 51301725 CAGAGCCAGCCCttggaggtgggggctgctggGTCTTGGGAAGCCTCCCTCGCACCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCgggaagaggtgggaggagagcaGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857270 371 + 50890351 CAGAGCCAGCCCTTGGAGGTGGGGGCTGCTGGGTCTTGGGAAGCCTCCCTCGCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCGCCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCAAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAAGAGGCGGGGGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGCGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45439832 371 + 49145316 CAGAGCCAGCCCTTGGAGGTGGGGGCCGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTGGGGCCACCCCCGGCCCGGGCTTTGGCGGCCACGGGGTAGGCCCCGAAGCCGGCGGCAATGCAGCCGCACTCGGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGGATCATGTAGAACAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGGGAGGAGAGCAGGAACAGCAGGCCGAAGAGAGGGGCCGGCCAGGCGCGGCGCAGCAGGGGCCGCAGGCTGGGCACGGCCCC i calJac3.chr22 I 584 C 0 s mm10.chr7 3685610 371 + 145441459 CAGAGCCAACCCTTGGTGGTGGGGCCTGCTGGGTCTTGGGAAGCCTCCCTCCCGCCGCCTGACCTGCTAGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggcTTTGGCAGCCACAGGGTAGGCCCCGAAGCCCGCGGCAATGCAACCGCACTCGGCCGCAATCCAGGCAACGTAGAAGCGCATGCGGAAGGCGAAGAAGACCGGGATCATGTAGAAGAGGCGGGTGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCACGCACAGCTTCCAGTGGGAAGAGATGGGAGGACAGCAGGAAGAGCAGGCCAAAGAGCGGGGCTGGCCAGGCGCGGCGCAGCAGGGGCCTCAGGCTGGGCACGGCTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19644424 371 - 122678785 CATGACCAGCCTGTGGTGATGGGGCCTGCCGGGTCTTGGGAAGCCTCCCTCCCACTGCCTGACCTGCTGGGGGGTGGGCATTGGAGGGTggggccgcccccggcccgggccTTGGCGGCCACAGGGTAGGCCCCGAAGCCGGCAGCAATGCAGCCGCACTCAGCGGCAATCCAGGCCACGTAGAAGCGCATGCGGAAGGCGAAGAAGACGGGAATCATGTAGAAGAGGCGGGCGGGCAGCGGGCGGGCGTAGAAGGCGTCCTCGCGCACGGCCTCCAGCGGGAAGAGGTGTGAGGACAGCAGGAATAGCAGCCCGAAGAGGGGGGCCGGCCAGGCTCGGCGCAGGAGGGGCCGCAGGCTGGGCACGGCTCC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=572975.000000 s hg38.chr19_GL949753v2_alt 155911 276 + 796479 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACTGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACAGGGGGGACAAGAA-ACTCAGagagacagagacagtaa s panTro4.chr19 59089122 274 + 63644993 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGACAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGACGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966202 275 + 60714840 GGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGCGCAGAGCTCAAGTCTG-----CAggag----gaggagagggagct-tggaaggaaggtgggagga--------gggagtgag-ggggcagagactgggcgcc-ggggagaccccaagggtagg--gacagagagcctgagagatggggataaggaacgagaggcagggaggACAAGAA-ACTCAGagagacagagacagtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735445 275 - 106955855 GGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-GGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCAAGTCTG-----CAGGAG----GAGGAGAGGGAGCT-TGGAAGGAAGGTGGGAAGA--------GGGAGTGAGAGGGACAGAGA-TGGGCGCC-GGGGAGGCCCCAAGGGTAGG--GACAGAGACCCTGAGAGATGGGGATAAGGAAAGAGAGACAGGGGGGACAAGAA-ACTCAGAGAGACAGAGACAGTGA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153028 275 + 51301725 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGCTGGGCAGAGCTCCAGtctg-----caggag----gaggagagggagct-tggagggaaggtgggaaga--------gggagagagaggggcagagactgggcgcc-ggggagaccccaggggtagg--gacagagacccagagagatggGGATAAGGAACgagagaca-gggggacaagaa-actcagagagacagagacagtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857641 271 + 50890351 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGGGCGGGGAGGGAGGGCCGC-CGTCAGA--------------------CA----------GGCAGGTGGGCAGAGCTCTAGTCTG-----C---AG----GAGGAGAGGGAGCT-TGGAGGGAAGGTGGGAAGA--------GGGAGAGAGAGGGGCAGAGACTGGGCGCC-GGGGAGACCCCAAGGGTAGG--GACAGAGACCCAGAGAGATGGGGATAAGGAACGAGAGACA--GGGGACAAGAA-ACTCAGAGAGACAGAGACAGtga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440203 269 + 49145316 CGGGAAGGGCTGCTCCAGCCAGTCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGT----GGGTCAGGGAGGGAGGGCAGC-AGTCAGA--------------------TG----------GGCAGGTGGGCAGAGCTCGAGTCTG-----C---AG----GAGGAGAAAGAGCT-TGGAGGGCAGGTGGGAAGA--------GGAATAGAGA--GGCAGACACTGGGTGCCGGGGGAAACCCcaggggtagg--gacagagacccagagagatggggacaaggaaggagatg----ggggacaacaagactcggagagacagagacagtga i calJac3.chr22 C 0 C 0 s mm10.chr7 3685981 286 + 145441459 CGGGAAGGGCTGTTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAATGGGCCTGT----GGAGGGTGGCAAGGAGCAGGT-GGTTGGATGCTGTGTATCTGAGCCTACTg----------gggaggtgg---gaggtgaaa---g-----gaggag----gaggatggagagat-gggaaaaggggggaggaga--------gtaagcagaagagttggggacagaa-----ggggagATATGGAGAGCTGGTAAACGAGGGCCaagggaagggaagggaaggggggggaggggaggggGgagagag-a--gagagagacagagagacaga i mm10.chr7 C 0 C 0 s canFam3.chr1 19644795 303 - 122678785 CGGGAAGGGCTGCTCCAGCCAATCCAGGTAGGTGCGGTAGCGGAAGAACGGGCCTGTGGCAGGAGGGAGGAGGGAGGGTGGCTGGTCAGA--------------------CATCCCTGGCTGGGAGGGTGGCCACAGCTAGTGTCTGACGTCCGGGGGGCCTGAGACTGGGGAGCTGCGGGGAGAGGGTTATGAAACCTCCAACAGGAGGAAGGAGGCCAGAGGCCTGAGATT-ggggagatg-gggggggagg--ggcgagga---ggagggagaggggTCTGAAACCCAGAACA--AGGGGAGTGAC-ACTCAGAGAAAAAAGGACAAGAA i canFam3.chr1 C 0 I 1485 e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=43831.000000 s hg38.chr19_GL949753v2_alt 156187 29 + 796479 cagaaaaacagacagagGgg--ccggtgcgg s panTro4.chr19 59089396 25 + 63644993 CAGAAAA----ACAGAGGgg--ccggcgcgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966477 29 + 60714840 cagaaaaacagacagagGgg--ccggcgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735720 29 - 106955855 CAGAAAAACAGACAGAGGgg--ccggcgtgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153303 29 + 51301725 cagaaaattagaaagagggg--ctggcgcgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857912 29 + 50890351 cagaaaattagaaagagggg--ccggcgcgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440472 31 + 49145316 cagGAAATTAGATAGTGGGggccaggcgcgg i calJac3.chr22 C 0 C 0 s mm10.chr7 3686267 29 + 145441459 gagagacagagacagagagg--ggggtaggg i mm10.chr7 C 0 I 1637 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=403767.000000 s hg38.chr19_GL949753v2_alt 156216 230 + 796479 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggacagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaatcagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc s panTro4.chr19 59089421 230 + 63644993 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttggagagcagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggt---gtggagggcacctgaattcccagctactggggaggctgaggcgggaggatcgtttgagcccaggctgcagtgagcagtgactgagctactgcattccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966506 232 + 60714840 tggctcacacctgcaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgaggccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattccgagctac-ggggaggctgaggcgggagaatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735749 233 - 106955855 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaacagttcgagaccagcctgggcaaaacggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgaattcccagctactggggaggctgaggcaggaggatcgtttgagcccaggctgcagtgagcagtgactgtgctactgcgttccagct i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153332 233 + 51301725 tggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaatggcaagaccccatcactacaaaaaataaaaattagccaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgTGCTACTGCGTTCcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46857941 233 + 50890351 gggctcacacctggaatcccagcactttgggaggcctagctgggaggactgcttgagcccaagagttcgagaccagtctgggcaaaacggcaagaccccatcactacaaaaaatgaaaattagctaggtgtggtggagggcacctgtaatcccagctactgggggggctgaggcgggaggatcgtttgagcctaggctgcagtgagcagtgactgtgctactgcgttccagcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440503 228 + 49145316 tggctcatacctagaattccagcactttgggagacctaggtgggag----gcttgagcccaagagtttgagaccagcctgggcaaaatggcaaaaccctgtcactacaaaacataaaaattaggcaggtgtggtgga-ggcacctgtaatcccagctactggggaggctgaggtgggaggatcgcttgagcccaggctgcagtgagcagtgactgtgctatggagttccagcc i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=12928.000000 s hg38.chr19_GL949753v2_alt 156446 10 + 796479 agggagggag s panTro4.chr19 59089651 10 + 63644993 agggagggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966738 10 + 60714840 agggagggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102735982 10 - 106955855 agggagggag i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47153565 10 + 51301725 ggggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858174 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4159.000000 s hg38.chr19_GL949753v2_alt 156456 8 + 796479 ggagggag s panTro4.chr19 59089661 8 + 63644993 ggagggag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47153575 8 + 51301725 ggaaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858184 8 + 50890351 ggaaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102735992 0 - 106955855 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=1751.000000 s hg38.chr19_GL949753v2_alt 156464 6 + 796479 ggaggg s panTro4.chr19 59089669 6 + 63644993 ggaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735992 2 - 106955855 ----gg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46858192 6 + 50890351 ggaagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=13597.000000 s hg38.chr19_GL949753v2_alt 156470 54 + 796479 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag s panTro4.chr19 59089675 54 + 63644993 aaggagtgaagaagggaagaaagaagggagggaaggagggaaggaaggagggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102735994 54 - 106955855 aaggagggaaggagggaagaagggaaggaaggaagaagggaaggaaggagggag i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=4041.000000 s hg38.chr19_GL949753v2_alt 156524 64 + 796479 ggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaa s nomLeu3.chr10 102736048 64 - 106955855 ggaaggagggaaggaggaagggaaAAAGGGAAAGACGGAGGGAGAGGGGAAGGAAAGAAAGAAA i nomLeu3.chr10 C 0 I 360 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 156588 400 + 796479 ggaaggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaagaagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggaaggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaaggagggaaggaaggagggaaggaaggagggagggaaggaaggagggagggaaggaaggagggagggagggagggaaggagggaaggaaggagggagggaaggagggaaggaaggagggagggaaggaa e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e ponAbe2.chr19 55966748 0 + 60714840 C e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=2257.000000 s hg38.chr19_GL949753v2_alt 156988 26 + 796479 ggagggagggaaggagggaaggaagg s ponAbe2.chr19 55966748 26 + 60714840 ggaaggagggaagaagggaaggaagg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440731 0 + 49145316 C e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=4371.000000 s hg38.chr19_GL949753v2_alt 157014 22 + 796479 agggagggaaggaaggagggaa s ponAbe2.chr19 55966774 22 + 60714840 agggagggaaggagagaaggaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440731 22 + 49145316 agggacaaagggaaggagggaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I e panTro4.chr19 59089729 0 + 63644993 C a score=3925.000000 s hg38.chr19_GL949753v2_alt 157036 17 + 796479 ggaaggaagaagggaaa- s panTro4.chr19 59089729 17 + 63644993 ggaaggaagaagggaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966796 16 + 60714840 gaagggaagaagagaa-- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45440753 18 + 49145316 ggaggaaaagaggcaaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e chlSab2.chr6 46858198 0 + 50890351 C e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=6073.000000 s hg38.chr19_GL949753v2_alt 157053 10 + 796479 agggaaggac s panTro4.chr19 59089746 10 + 63644993 agggaaggac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966812 8 + 60714840 --ggatggag i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 46858198 10 + 50890351 agggaaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440771 10 + 49145316 agggagggag i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e papAnu2.chr19 47153583 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60025400 1155 + 64156825 I a score=188067.000000 s hg38.chr19_GL949753v2_alt 157063 117 + 796479 ggagggaaggaggAAGGAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATATGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA s panTro4.chr19 59089756 117 + 63644993 ggagggagggaggaaggAAAGAAACTAGGAGATAGCTGTGGCACTTTAGCTACAATTTGATGGTGGTCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGTTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966820 90 + 60714840 ggagggaggaaggAAAGAAAGAAACTAGGAGATAGCTGTGGTACTTTAGCTACAACATGATGGTGGGCTGGCCTAGAGAG---------------------------GGGGTTAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60026555 117 + 64156825 ggaggaagggaggaaggaaagaaactaggagatagttgtggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCAGGGTTAAAA i rheMac3.chr19 I 1155 C 0 s papAnu2.chr19 47153583 117 + 51301725 ggaggaagggaggaaggaaagaaactagGAGATAGCTGCAGAACTTTAGCTACAACATGATGGTGATCTGGCCTAGGGAGGAAGCAGTGTGATTCACAGAAGGGACCGGGGttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858208 117 + 50890351 ggaggaagggaggaaggaaagaaactaggagatagctgcggaactttagctacaacatgatggtgatctggcctagggaggaagcagtgTGATTCACAGAAGGGACCNGGGTTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440781 117 + 49145316 ggaggaaggagggaaagaaagaaACTAGGACATAGCTGTGGCACTTTAGCTACAACATGATGGTAGTCTGGCCTAGGGAGGAAGGAGTGTGATTCACAGAAGGGACCAGAGTTAAAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e nomLeu3.chr10 102736112 360 - 106955855 I e macFas5.chr19 55048529 6096 + 59248254 I a score=133911.000000 s hg38.chr19_GL949753v2_alt 157180 69 + 796479 TTTTTATATGTTCAC-AAAGGCCGTATGTTTAGGTCAATGTAGCATGGGAAGATAAAAG--------GAAAAAAAAAA s panTro4.chr19 59089873 69 + 63644993 TTTTTATATGTTCAC-AAAGACCGCATGTTTAGGTCAATGTAGCATGGGAAGTTAAAAA--------GAAAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966910 69 + 60714840 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGTAGGGTGGGAAGTTAAAAA--------GAAAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736472 69 - 106955855 TTTTTATATGTTCAC-AAAGACCGTATGTTTAGGTCAATGCAACATGAGAAGTTAAAAA--------GAAAAAAAAAT i nomLeu3.chr10 I 360 C 0 s rheMac3.chr19 60026672 70 + 64156825 TTTTTATATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaa--------aaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153700 78 + 51301725 tttttgtatgttcACAAAAGACCATATGTTTAGGTCAATGTAGCatggaaagttaaaaataaaaaataaaaaagaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858325 76 + 50890351 TTTTTGTATGTTCACAAAAGACCATATGTTTAGGTCAATGTAGCATGGAAAGTTaaaaataaaaa--aaaaagaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45440898 70 + 49145316 TTTTTGTATATTCACAAAATAACACATGTTTAGGTCAATGTAGTATGGGACGTTAAAAA--------TTAAAAAAGGA i calJac3.chr22 C 0 I 310 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=6360.000000 s hg38.chr19_GL949753v2_alt 157249 7 + 796479 ----CAAATTA s panTro4.chr19 59089942 10 + 63644993 -AAACAAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966979 9 + 60714840 --AACAAATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736541 2 - 106955855 ---------TA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026742 11 + 64156825 aaaaaaaaTTA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153778 11 + 51301725 aaaaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858401 11 + 50890351 aagaaaaatta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45440968 310 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=606277.000000 s hg38.chr19_GL949753v2_alt 157256 284 + 796479 AAATaaataaataagaccacatgttgtatgattccatttgtaagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgtgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacaatggtcatgtctgcacaactcggtgaatatactaaaaatcagggagttgtat----gttttGTGTTTTTTT-----------TTTTTTCCAGGAAATTAAAGAAGCCAAGAGTTGTATGT s panTro4.chr19 59089952 283 + 63644993 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttgcagggtatgaaactgttctgaatata-actacacagcggtcatgtctgcacaactctgtggatataccaaaagtcagggagttgtat----gttttGTGTTTTTTT-----------TTTCC-CCAGGAAATTAAAGAAGCCAAGAGTTGTATGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55966988 284 + 60714840 AAATaaataaataagaccacatgttgtatgattccatttataagcgcaatgtccagaacaggcaaatctttacagatagaaggtcaattactggttaccagggatggatggaggtttgcgggatgatggacatggggtttctttacagggtatgaaactgttctgaatata-agtacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaT----GGTTGTTGTTTTTTT-----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736543 288 - 106955855 AAATaaataaataagaccacgtgttgcatgattccatttataagtgcaatgtccagaacaggcaaatctttacagatagaaagtcaattactggttaccagggatggatggaggtttgcgagatgatggatatggggtttctttgcagggtatgaaactgttctgaatata-actacacagtggtcatgtttgcacaactctgtggatatactaaaaatcagggagttgtaTGTTGGtttttttttttttt-----------tttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60026753 286 + 64156825 AAATaaataaataagaccacatattgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgacggatatggggtttctttgcagggtatgaaattgttctgaaaatacactacacagtggtcatgtttgcacaactccgtggatatactaaaaatcagggagttgtaT----GTTGGTTTTTCTTTTC----------TTTTTTTCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47153789 293 + 51301725 aaat-aataaataagaccaCATGTTGTGTGATTCCATGTGTAAGTACAATGTCCGGAACAGGCAAATCTTTACAGATAGAAAGTCAATTACTGGTTTCCAGGGATGGATGGAGGTTTGGGGGATGACGGATATGGGGTTTCTTTGCAGGGTATGAAATTGTTCTGAAAATA-ACTACACAGTGGTCATGTTTGCACAACTTCGTGGATATACTAAAAATCAGGGAGTTGtat----gttggtttttcttttcttttctttt-tttttttcaggaaatcaAAGAAGCCAAGAGTTGTATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46858412 296 + 50890351 aaaTaaataaataagaccacctgttgtgtgattccatgtgtaagtacaatgtccggaacaggcaaatctttacagatagaaagtcaattactggtttccagggatggatggaggtttgggggatgatggatatggggtttctttgcagggtatgaaattgttctgaaaatgcactacacagtggtcatgtttgcacaactccgtggatgtactaaaaatcagggagttgtaT----GTTGGtttttcttttcttttcttttctttttttCAGGAAATCAAAGAAGCCAAGAGTTGTATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441278 268 + 49145316 aaataaataaataaGA-cacaggttgtatgactccatttgtgagcacaatgtccagaacaggcagatctttacagacaggaagtcaagcagtgctttccagagacggacggcggtttgggggatgacagatctggggtttctttgcagggtgtgaaactgttgtgaaaata-actacacagtggtcatgtttgtacaactcggcggatatactaaaagtcagggaattTTTT------------------------------TTTTTTTTACAGAATCAAAGCAGCCAAGAGTTGTGTGT i calJac3.chr22 I 310 I 322 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=210795.000000 s hg38.chr19_GL949753v2_alt 157540 155 + 796479 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac s panTro4.chr19 59090235 155 + 63644993 TTTAAGTGGATGAGTATGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAACCTTTGATGAGGTAAACATTAATGAAAAATATTTTCTTTTTAAAATTT--Cacatatatatacacatacacacatacata----tatatacacacatgcacacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967272 144 + 60714840 TTTAAGTGGATGAACATGTGAATTAGAGTTCTCTAAAGCTGTTATTGG------AAAAAAAAACCTTTGATGAGGTAAACA------AAAAATATTTTCTTTTTAAAATTT--Cacatatatatatatacacacacacacaca----catat------atatacacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736831 158 - 106955855 TTTAAGTGGATGAATATGTGAATTAGAATTCCCTAAAGCTTTTATTGGAAAAAAAAAAAAAAACCTTTGATGAGGTATACATTAATGAAAAATATTTTCTTTTTAAAATTT--cac----atatacacacacacacatacata----tatatacacacatgcacacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027039 144 + 64156825 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAGAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAATT------TTTTTAAAATTT--cacatatatatacatatatatacaca--------tatatatacacacgcacacac i rheMac3.chr19 C 0 I 323 s papAnu2.chr19 47154082 154 + 51301725 TTTAAGTGGATGACTATGTGAATTAGAGTTCCCTAAAGCTgttattgg-------aaaaaaaa-ctttGATGAGgtaaacattaatgaaaaat------ttttttaaatttcacacatatatatacatatatatacacacacacacgtatatataaatatgtatacat i papAnu2.chr19 C 0 I 292 s chlSab2.chr6 46858708 144 + 50890351 TTTAAGTGGATGACTAGGTGAATTAGAGTTCCCTAAAGCTGTTATTGG-------AAAAAAAA-CTTTGATGAGGTAAACATTAATGAAAAAT------TTTTTTGAATTT--CACacatatatatacatatatacaca--------tatatatacacatgcacacac i chlSab2.chr6 C 0 I 324 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=16845.000000 s hg38.chr19_GL949753v2_alt 157695 9 + 796479 acatacata s panTro4.chr19 59090390 9 + 63644993 acatacata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967416 9 + 60714840 acatacata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736989 9 - 106955855 acatacGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027506 9 + 64156825 acatacata i rheMac3.chr19 I 323 C 0 s papAnu2.chr19 47154528 9 + 51301725 acatacata i papAnu2.chr19 I 292 C 0 s chlSab2.chr6 46859176 9 + 50890351 acatacata i chlSab2.chr6 I 324 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e calJac3.chr22 45441546 322 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=24545.000000 s hg38.chr19_GL949753v2_alt 157704 13 + 796479 tgtattttttgag--- s panTro4.chr19 59090399 13 + 63644993 tGTAttttttgag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967425 13 + 60714840 TGTAttttttgag--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102736998 13 - 106955855 TGTATTTTTTGAG--- i nomLeu3.chr10 C 0 I 303 s rheMac3.chr19 60027515 13 + 64156825 tatattttttgag--- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154537 13 + 51301725 tatattttttgag--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859185 13 + 50890351 tatattttttgag--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441868 16 + 49145316 tgtatttttagtagag i calJac3.chr22 I 322 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=287524.000000 s hg38.chr19_GL949753v2_alt 157717 146 + 796479 atggagtcttgctctgttgcccaggatggagtgcagtggtgtgatcttggctcactgcaaactccgtctcgtgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacacaccaccatgcccgg-ctaa s panTro4.chr19 59090412 146 + 63644993 atggagtcttgctctgttgcccaggatggagtgcagtggtgcgatcttggctcactgcaacctccgcttcttgggttcaagcgattctccagtttcagcctcccaagtagctgggattacaggcacactccgccatgcccgg-ctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967438 146 + 60714840 atggagtcttgctctgttgcccaggatggagtgcagcggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcacacaccaccatgcctgg-ttaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737314 146 - 106955855 atggagtcttgctctgttgcccaggatggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggtatacaccaccatgcctgg-ctaa i nomLeu3.chr10 I 303 C 0 s rheMac3.chr19 60027528 146 + 64156825 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154550 146 + 51301725 acggaatcttgctcttttgcccaggctggagtgcagtggtgcaatctcgcctcactgcaacctccgcctcctgggttcaagcgattctcccgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859198 146 + 50890351 acggaatcttgctcttttgcccaggctggagtgtagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagcctcccaagtagctgggattacaggcgcacaccaccatgcccgg-ctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441884 114 + 49145316 acggggtttcaccatgttgaccaggatgg-------------------------------tctcaatctcttgacctc--gtgatccactcgcctcagcctcccaaagcgctgggattataggcgtgagccaccgcacccggcctaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3686296 1637 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=359034.000000 s hg38.chr19_GL949753v2_alt 157863 138 + 796479 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccctttt s panTro4.chr19 59090558 138 + 63644993 tttttgtattttcagtagagacggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967584 138 + 60714840 tttttgtattttcagtagagacggggtttcaccgtgttggccaggctggtctcaaaccc---------------ctgacctca-----ggtgatctgcctgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcctggccCtttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737460 138 - 106955855 tttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctca-----ggtgatctggctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027674 136 + 64156825 tttctgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctc---------------ctgacctt-------gtaatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccggccCtttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154696 138 + 51301725 tttctgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagtcactgcgcccagccctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859344 138 + 50890351 tttctgtatttttagtagagatgggatttccccatgttggccaggctggtctcaaactc---------------ctgacctta-----ggagatctgcccgtctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccagccctttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45441998 138 + 49145316 tttttgtatttttaatagagatagggtttctccatgttggccagcctggtctcaaaccc---------------ctgacctca-----ggtgatccacctgccttagcctcccaaagtgctgggattacaggcatgagccactacacccagccCTTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3687933 157 + 145441459 tttttttttttttttccgagacagggtttctctgtgtagccctggctgtcctggaactcactttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctccc-gagtgctgggattaaaggcttgcgccaccatgcctggctctctg i mm10.chr7 I 1637 I 128 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=329562.000000 s hg38.chr19_GL949753v2_alt 158001 152 + 796479 aattttatatttatttattttttaAAAATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaacttttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca s panTro4.chr19 59090696 152 + 63644993 aattttatatttatttattttttaaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggcctcaagcaatcctctcgcctcagcctccgaaagtgctaggattataggcataagccccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967722 152 + 60714840 aattttatatttatttatttttttaaaataaaGGTTTAAAATAAagggacgggatcttgctatgttgcccaagttgatctcgaactcttggcctcaagcaatcctctcgcctcagcctcccaaagtgctaggattataggcataagccccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737598 152 - 106955855 AATTTTATATTTGTTTATTTTTTTAACATAAAGGTTTAAAATAAagggacgggatcttgctatgttggccaagttgatcttgaactcttggtttcaagcaatcctctcacctcagcctcccaaagtgctaggattataggcataagccccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027810 152 + 64156825 aattttatatttatttatttttttaaaataaaGGTTTAAATTAAagagacgggatcttgctacattggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154834 152 + 51301725 aattttatatttatttatttttttaaaataaaggtttaaaataaaGGGACGGGATCTTGCTACATTGGCCAAGtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagTCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859482 152 + 50890351 aattttatatttatttatttttttaAAATAAAGGTTTAAAATAAagggacgggatcttgctacgttggccaagtggatcttgaactcttggcctcaagccatcctctggcctcagcctcccacagtgctgagattataggcgtcagtcccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442136 134 + 49145316 AATtttatatttattta-----------------tttaaaacaaagggat-ggatcttgctatgttggccagattgactttgaactcttggcctcaggcagtcctctcacctcagcctcccaaagtgctatgattataggcatgagccccca i calJac3.chr22 C 0 C 0 e mm10.chr7 3688090 128 + 145441459 I e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=20007.000000 s hg38.chr19_GL949753v2_alt 158153 8 + 796479 cgcccagA s panTro4.chr19 59090848 8 + 63644993 cgcccagA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967874 8 + 60714840 cacccagA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102737750 8 - 106955855 agcccagA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027962 8 + 64156825 cgcccagA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154986 8 + 51301725 CGCCcaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859634 8 + 50890351 cacccagA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442270 8 + 49145316 cgcccagc i calJac3.chr22 C 0 C 0 s mm10.chr7 3688218 8 + 145441459 TGCCTGGA i mm10.chr7 I 128 C 0 e canFam3.chr1 19645098 1485 - 122678785 I e macFas5.chr19 55048529 6096 + 59248254 I a score=1434208.000000 s hg38.chr19_GL949753v2_alt 158161 519 + 796479 TGAAAA---ATATTTCCTTAAGCTGAAAGTGGACCCTAAGCCGTGAATATTTGTTGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATTGCTTAGGTTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccctgggcagggcgGG------AACACACAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGT--------TGTTAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGATGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG s panTro4.chr19 59090856 527 + 63644993 TGAAAA---ATATTCCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTAGTCTGGGAAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGag-acagccagcttctaccccaaagcagctctggtccagcggaggtgtgagacgtagacccagac--acatgccca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGGAAGGGGACACAGGA--GACAGAGCGGCAGAGTGGCACAGCTGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAGGGCACATCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55967882 525 + 60714840 TGTAAA---ATATT-CCTTAAACTGAAAGCGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATATGCTACAAG----GAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgagatgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggctgccccggggagggtgGA------AACACAGAACAGGCACTCAGGGCGG-AGGGGACACAGGA--GACAGAGTGGCAGAGTGGCAGAGCTGTCAGGGCAGCCCCACTTACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCT-GACTTCACTGGCCAGGCTCACCAGCTG i ponAbe2.chr19 C 0 I 352 s nomLeu3.chr10 102737758 520 - 106955855 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTGTCTGGGCAGCAAAAATATCAGGTTGACATAGATCTTTACCTCCTTTATCTCTTCTCTTTGCTCCCAATACGCTACAAG----GAGAAGAGCAAGGAATCGCTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggtgtgacacgtagacccagac--acgtgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACGGGCACTCAGGGCAGAGGGGGACACAGGT--GACAGAGTGGCAGAGC--------TGTCAGGGCAGCCCCACTCACCTGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAGGGAAGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCTGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60027970 507 + 64156825 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATTAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccaaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctca-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACATAGAACAGGCACTCAGGGCGG------------------CGGAGAGACAGAGC--------TGCC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47154994 507 + 51301725 tgaaaa---atatttccttaaactGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTttacctcctttctctcttctctgtgctCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGAGAACAGCCAGCTTCCACCCTGAAGCAGCTCTGGTCCAGCGGAGGCGTGAGACGTAGACCCAGAC--ACATGCTCA-CCCTCACAG--CAGCAGATGCTAGGATGGAGGTTGCCCCGGGCAGGGCGGG------AACATAGAACAGGCACTCAGGGTGG------------------CGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACGTAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCttcctctgggccaggtgcaggtCCTGGACTTCACTGGCCAGGCTCACCAGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46859642 507 + 50890351 TGAAAA---ATATTTCCTTAAACTGAAAGTGGACCCTAAGCTGTGAATATTTGTTATCTGGGCAGCAAAAACATCAGGTTGACATAGATCTTTACCTCCTTTCTCTCTTCTCTGTGCTCCCCATAAGCTACAGGAGAAGAGAAGAGCAAGGAATCACTTAGGCTGagaacagccagcttctaccccgaagcagctctggtccagcggaggcgtgagacgtagacccagac--acatgctcg-ccctcacag--cagcagatgctaggatggaggttgccccgggcagggcgGG------AACACAGAACAGGCACTCAGGGCGG------------------TGGAGAGACAGAGC--------TGTC-GGGCAGGCCCACTCACCTGTCATGATTCCCACATAGCAGTAACTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCGGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAACCCGAGGCCATTTCCTTCCTCTGGGCCAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442278 491 + 49145316 TGAAAA---ATATTTCCTTAAACTAAAAGTGGACCCTAAAT----------------------------------------ACACAGACCTTTGCCTCCTTTATCTCTTCTCTTTGCTGCCAATAAGCTACAAC-AAGGAGAAGAGCAAGGAATCACTTAGGCTGAGAAGAGCCAGCCTCCACCCCAAGGCACTTCTGGTCCAGTGGAGGTGTGAGACTTGGATCCACAT--ACATGCTCA-CCCTCACAG--CAGCGGACGCTAAGATGGAGCTTGCCCCGGGCAGGGTGGG------AACACAGAATAGGCACCCAGGGAGGAGGGAAACACGGGA--GACAGAGCGGCGCAGCGGCAGAGCTGTCCCGGCAGGCCCACTCACCGGTCATGATTCCCACGTAGCAGTAGCTGTAGCTGAGCGTCTCCATCAAGGAGGGCACGTCAGGCAGCAGCCCCAGGGTGGGCCCCTTGCTGAAGCCCGTGGCCATTTCCTTCCTCTGGGCTAGGTGCAGGTCCTGGACTTCACTGGCCAGGCTCACCAGCTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3688226 459 + 145441459 GGGAAAGATACATTTTCTGAAATGGAAA---GATCCTGGGTTAGGAATATTTACTCCATGGATGGCAGAAAC-CCAGGTTTACATAGGCC--TATCTCCTTTAACTCTCCTATTGGCCCCCTA------ACAGG----AGAAAAAGGAAGCAATCCTTCAGGATTAG--------------TTCCCACAGTAG---------------------------------ACAG--ATATGCT-----CTGACAGGACAGTAGCTGACAGAGTGTAGGTAGCCTAGGACAGAGCCGGGGACATAACACAGGAACAGAACTCTGGGTAGATCGAGGCAGAGGA-TGACCCAGAG---------------TGCT-GGGCAGG--CACTCACCTGTCATGATTCCCACGTAACAGTAGCTATAGCTGAGTGTCTCCATCAAAGAGGGGACCTCAGGCAGGAGGCCCAGCGTAGGCTCCTTGTGGAAGCCGGAGGCTATTTCCTTTCTCTGAGCCAGATGCAGATCCTGGACTTCACTAGCTAGACTCACCAACTG i mm10.chr7 C 0 I 2 s canFam3.chr1 19646583 479 - 122678785 TGGAAA---CTACCTCCTGAGGCT-AACGTGG-----GAGTGGAATGTATTTATTCCCTGCATGGCAGAAACCTCAGGCTTCCATAGGTCATT--CTCCCTCATCTC--CTATTTGTTCCCAAGAAGCCACAGG----------------AAATCATTTAGGCGGAGAACAGTCTGTCTCTACTCTGGAGGAG--------CAGCGGGAAAGCTTGACATAAACCCAGGCCTAGATGCTCATCCTTTAGAG--GAGCAGACACTGGGATGGAG---------------GCAGG------AACACAGGGCAGGCACCAAAGTCAGGGTGCAGAATGGAGCCGAGAGGGTGACGGGAT--------GGGG-GCACAGGCACACTCACCTGTCATGATTCCTACGTAGCAGTAGCTGTAGCTGAGTGTCTCCATCAGGGAGGGGACGTCAGGCAGGAGCCCCAGGCTGGGCCCCTTGCTGAAACCTGAGGCCATTTCCTTCCTCTGGGCCAAGTGCAGGTCCTGTACTTCACTGGCCAGGCTCACCAGCTG i canFam3.chr1 I 1485 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=9000.000000 s hg38.chr19_GL949753v2_alt 158680 2 + 796479 GG s panTro4.chr19 59091383 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968759 2 + 60714840 GG i ponAbe2.chr19 I 352 C 0 s nomLeu3.chr10 102738278 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028477 2 + 64156825 GG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155501 2 + 51301725 GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860149 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442769 2 + 49145316 GG i calJac3.chr22 C 0 I 20 s mm10.chr7 3688687 2 + 145441459 GG i mm10.chr7 I 2 C 0 s canFam3.chr1 19647062 2 - 122678785 GG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55048529 6096 + 59248254 I a score=119831.000000 s hg38.chr19_GL949753v2_alt 158682 59 + 796479 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC s panTro4.chr19 59091385 59 + 63644993 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968761 59 + 60714840 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCATACCCATCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738280 59 - 106955855 TGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTCTGGGCCCTTCCCCACACCCATCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028479 59 + 64156825 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155503 59 + 51301725 CGGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCCTTCCCCACACCCATCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860151 59 + 50890351 CAGAAGGGGGTGGGCAAGGGGC-----CAGGTCAGACTTTGGGCCGTTCCCCACACCCATCTCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3688689 55 + 145441459 AAGAGAGAGGAAGGCAAGTGAT-----TGG---CGTCCCCAGGCCA-CCTTCACATCCACTTTC i mm10.chr7 C 0 I 1564 s canFam3.chr1 19647064 57 - 122678785 -AGCAGGGGGCACACGTAGGGTACAGACACATCAGACAACAGGACC-TCCTCGCCCCCA----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=12201.000000 s hg38.chr19_GL949753v2_alt 158741 8 + 796479 CTTGCGCG s panTro4.chr19 59091444 8 + 63644993 CTTGCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968820 8 + 60714840 CTTGCGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738339 8 - 106955855 CTTGCGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028538 8 + 64156825 CTTGTGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155562 8 + 51301725 CTTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860210 8 + 50890351 CTTGTGCT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647121 0 - 122678785 C e calJac3.chr22 45442771 20 + 49145316 I e macFas5.chr19 55048529 6096 + 59248254 I a score=841860.000000 s hg38.chr19_GL949753v2_alt 158749 403 + 796479 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttctgtgcttacctgctctcacgcaatcacggaggtttcgatactatccacacgctgaggacgcccaaacgcta----------------------ccccag-ccccagacctatccaatcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAAtctc s panTro4.chr19 59091452 402 + 63644993 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCCCATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagggctcagtcccaggccctcc--tccc--ctttccctgttccgtgcttacctgctctcatgcaatcacggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactcggatgtct-ccaggcacccc-----aaacgcactggaaacggaacatgatgttacccaccccacaaggtagaccctcttctagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaat--------ctCCCTCACTCCCCAAATCCGATCCTTTAATCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55968828 401 + 60714840 GCTGCCCTCAGCAGCCAAGGCGTGCT-------GGGTGCCC--------------------------G-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagccctaggccctcc--tcccctctttccctattccatgcttacctgctctcactcaatcacggaggtttcgatattatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttatactccgatgtct-ccaggcacccc-----aaacgcactggaaacagaacacgatgttacccaccccacaaggtagatcctcttctagtgtctcccctca---aataggccacca--------aattgttcaagtcaaaaac--------ctCCCCCACTCCCCAAATCCAAtcttttaatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738347 403 - 106955855 GCTGCCCTCGGCAGCCAAGGGGTGCT-------GGGTGCCC--------------------------A-CAGCTCTGCACATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCggtgttccccagtgctcagtcccaggccctcc--tcccctctttcccttttccgtgcttacctgctctcacgcaatcgcggaggtttcgatactatccacacgctgaggatgcccaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttatactcggatgcct-ccaggcacccc-----aaatgcaccggaaacggaacacgatgttacccaccccacaaggtagatcctctt-tagtgtctcccctcaaacaacaggccacca--------aattgttcaagccaaaaac--------ctCCCTCACTCCCCAAATCCAATCCtttaatctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028546 399 + 64156825 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTGGGCagtgctccccagggctcagtcccaggccctcc--tccccgccttccctgttctgtccttacctgctctcaggcagtcccagaggtttcgatactatccacacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaagtggcttattggcatttagactcggatgtct-ccaggcacccca----aaacgcactggaaacggaagacgatgttacctgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaac--------ctCCCTCACTCCCCAAATCCGAtctctt------ i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47155570 405 + 51301725 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGTGTATCT--------AGGTTGTGT-GTAACGCCTCTAGCTAGGCAGTGTTCCCCAGAGCTCAGTCCCAGGCCCTCC--TCCCCGCCTTCCCTGTTCTGTCCTTACCTGCTCTCAGGCAGTCACAGAGGTTTCGATACTATCCACACACTGATGATGCTCAAACGCTA----------------------CCCCAG-CCCCAGACCTATCCA-TCAAGTGGCTTATTGGCATTTAGACTCGGATGTCT-CCAGGCAccgca----aaatgcactggaaacgGAAGACGATGTTACCCGCCCCACAAAGTAGATCCTCTTCTAGTGTCTCCCCTGAAACAACAGGTCACAA--------AATTGTTCAAACCCAAaacctccctcactccctcactcCCCAAATccgatctc-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860218 403 + 50890351 GCTGCCCTCTGCAGCCAAGGGGTGCT-------GCATGCTC--------------------------G-CAGCTCTGCATATCT--------AGGTTGTGT-GTAAGGCCTCTAGCTGGGCAGTgttccccagggct--gtcccaggccctcc--tccctgccttccctgttctgtccttacatgctctcaggcagtcacagtggtttcgatactatccatacactgatgatgctcaaacgcta----------------------ccccag-ccccagacctatcca-tcaaatggcttattggcatttacactcagatgtct-ccaggcaccaca----aaacgcactggaaacggaagacgatgttacccgccccacaaagtagatcctcttctagtgtctcccctgaaacaataggccacca--------aattgttcaaacccaaaacctcccttactccctcactccccaaatccgatcTC-------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45442791 374 + 49145316 GCTGCCCTCTGCAGCCACAGGGTGCT-------GGGCACCC--------------------------ACCAGCTTTGCACCCCA--------AGGTTGTTT-GTAAAGGCCGTATC-GGACagtg-tctccagggctgagtcccaggcattcc--tccc--ctttccccattccatccttacctgctctcacacaatcacggagctttagatactaccca-----------------------------------------------cccag-ccccagacctatcca-ggtaatggcttattggcatcgatacgtggatgtct-cta-gcacttc-----aaaagcactggaaacagaagacgatgttaccca-cccacaaagcagaccctcttctagtctctcccctcaaacaaaaggccaccg--------aattgttcaagctgaaaac--------ctCCCTCGATCCCCAAATCCTATCCCTTAACCtc i calJac3.chr22 I 20 I 294 s canFam3.chr1 19647121 456 - 122678785 -CTCCTCTCAGCAGCCAAGGGGTGCTGCGGCCAGCGTGCCACTAGGAGCCGAGCTTCTATTCCAGGGG-CAGCTCTGGGCCTCTGGAATCAGAGGTGGCCCGGTAGCAGCTTCTGCTAGCTGAGGGCTTTGGGCACTCCCTTCTGGGcccttccatctctctgttcccccttccaggttcttctgtcct----------ctgtggctt-gataccagccacgatctcatgacctccacaaactgtatccttagtctgggttcctccctccagcccccaaaaccactca---gggtgactc-ctgtcattaggacttggatgcctgccaggttcctcagactcgacacatccagagtggagcgttgtgctactcactccacagagcgggtcccctcccag----tcccctcag--caaaggccaccagcagcctgaactgctcagaccaggaac--------ctGCCTTACTTCCCAGATCTGATCCC-------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=-4554.000000 s hg38.chr19_GL949753v2_alt 159152 12 + 796479 tct------ttttttttt s panTro4.chr19 59091854 18 + 63644993 tctctctttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969229 7 + 60714840 tct-----------tttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738750 4 - 106955855 ttt--------------t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028945 5 + 64156825 --t-----------tttt i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 46860621 1 + 50890351 -----------------G i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647577 0 - 122678785 C e calJac3.chr22 45443165 294 + 49145316 I e papAnu2.chr19 47155975 0 + 51301725 C e macFas5.chr19 55048529 6096 + 59248254 I a score=238135.000000 s hg38.chr19_GL949753v2_alt 159164 111 + 796479 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatactggtgtgatctcggctcactgcaacccccacctcctgggggcgcaagcaattctcatgcctc s panTro4.chr19 59091872 111 + 63644993 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgtgatctcggctcactgcaacctccacctcctgggggctcaagcaattctcatgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969236 111 + 60714840 ttttcttttttgagacaagttttg--ctctgtcaccca-----ggctggagtatagtggcgcgatctcggctcactgcaacctgtgcctcctggaggctcaagcagttctcatgcctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738754 110 - 106955855 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagcatagtggcgc-atctcagctcactgcaaactccgcctcctgggggctcaagcaattctcatgcgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60028950 109 + 64156825 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcaca--gtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i rheMac3.chr19 C 0 I 26 s papAnu2.chr19 47155975 111 + 51301725 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860622 111 + 50890351 tttttttttttgagacaagttttg--ctctgtcaccca-----ggctggagtagagtggcacgatgtcggctcactgcaacctccgcctcctggggactcaagcaattctcatgcctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443459 103 + 49145316 tctttctttttgagacaagtttta--ctctgtcgccca-----ggctggagta--------tgatcttggctcactgccaccttcccctcccaggggttcaagcaatgctcatgcctc i calJac3.chr22 I 294 C 0 s canFam3.chr1 19647577 90 - 122678785 --------------GCAGGTCTCGGAGTCTGTCCCCTACACTCCGCTGAGGCTGAATGGGTTCACCCTGGTTCCCTGCCCCCCCCTCCCCC--------------ACCCCCCCTTCTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=30128.000000 s hg38.chr19_GL949753v2_alt 159275 16 + 796479 agctggc--caggctggt- s panTro4.chr19 59091983 16 + 63644993 agctggc--caggctggt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969347 16 + 60714840 agctggc--cagactggt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738864 16 - 106955855 agctggc--caggctggt- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156086 16 + 51301725 agctggc--caggctggt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860733 16 + 50890351 agctggc--caggctggt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443562 16 + 49145316 agctggc--caggctggt- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647667 19 - 122678785 TGCAGACCTCAGGCTGAGC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029059 26 + 64156825 I a score=125286.000000 s hg38.chr19_GL949753v2_alt 159291 52 + 796479 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG s panTro4.chr19 59091999 52 + 63644993 ctcgaactcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969363 52 + 60714840 ctcgaattcctggcctcaagtgatctgcccgccttgaaatcccTTAAG-TTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738880 52 - 106955855 ctcgaactcctggcctcaagtgatctgcccgccttgaaatccctgaag-tTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029085 50 + 64156825 CTCGA--TTCTGGCCTCAAGTAATCGGCCTGCCTTGAAATCCCTTAAG-TTTG i rheMac3.chr19 I 26 C 0 s papAnu2.chr19 47156102 52 + 51301725 ctcgaacttctggcctcaagtaatcggCCTGCCTTGAAATCCCTTAAG-TTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860749 52 + 50890351 ctcgaacttctggcctcaagtaatctgcctgccttgaaatcccTTAAG-TTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443578 53 + 49145316 ctcaaactcctggcctcaagtgatctgcccaccttgaaatcccTTAAGTTTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647686 47 - 122678785 CTACAGCAGCAGGCCTCAGCTGGGCTTCCAGCTT-----CCTCTCAGG-TTTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=276506.000000 s hg38.chr19_GL949753v2_alt 159343 123 + 796479 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT s panTro4.chr19 59092051 123 + 63644993 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969415 123 + 60714840 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATGTTGTACTCTCCATCCTTTCCCACCAGTCCCAAGGCCCACCctatatcaacagacctccttcttccagcttgtggctggctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102738932 123 - 106955855 AGTCTGTTGCCTCTTTCCATCTCCACTACTGAGCTGAATATATTGTAGTATCCACCCTTTCCCACCAGTCCAAAGGTCTACCCTATATCAATAGATCTCCTTCTTCCAGCTTGTGGCTGGGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029135 123 + 64156825 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTGTactctccaccctttcccaccagtcccaaggtccaccctatatcaatagatctcattcctccagcttgtggctgggtt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156154 123 + 51301725 ACTCTGTTGCCTCTTTTCATCTCCACTACGGAGCTGAATATGTTGTACTCTCCACCCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860801 123 + 50890351 ACTCTGTTGCCTCTTTTCATCTCCACTACTGAGCTGAATATGTTATACTCTCCAACCTTTCCCACCAGTCCCAAGGTCCACCCTATATCAATAGATCTCGTTCTTCCAGCTTGTGGCTGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443631 121 + 49145316 AGTC--TTGCCTCTTTCCGTCTCCACTAATGAGAGGAGTACGTTGTACTCTCCATCCTTTCCCGCCAGTCCCAAGGTCGGCCCTATATCCACAGGGCTCTGTCTTCCAGCTTCTGGCCAGGGC i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647733 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=291516.000000 s hg38.chr19_GL949753v2_alt 159466 120 + 796479 GTCAGTAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTATTCCCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT s panTro4.chr19 59092174 120 + 63644993 GTCAATAGAAATCCCTGGCTGGA----GACAAAGTCAGG--AGAGGGAGGGTAGGGCTTTTACTCGCTTGTAAGATGGCCTTGGGCTGGCTGTCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969538 120 + 60714840 gtcaatagaaacccctggctgga----gacgaagtcagg--agagggaggacagggcttttattcccTTATGAGATGGCTTTGGGCTGGCCGTCACCCCT--------GATAGATCATTTCAAGGT----GGGTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739055 120 - 106955855 GTCAATATAAATCCCTGGCTGGA----GACGAAGTCAGA--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCGCCACTCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029258 124 + 64156825 gtccatagaaatccctggctggagtcggacaaagtcagg--agagggagggcagggcttttattcccttgTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47156277 124 + 51301725 GTCCATAGAAATCCCTGGCTGGAGTCCGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTCGGGCTGGCCATCACCCTT--------GACAGATCGTTTCAAGGT----GGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46860924 124 + 50890351 GTCCATAGAAATCCCTGGCTGGAGTCGGACAAAGTCAGG--AGAGGGAGGGCAGGGCTTTTATTCCCTTGTGAGATGGCCTTGGGCTGGCCATCACCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443752 123 + 49145316 GCCAACAGAAAGCCCTGGCTGGAGATGCATGAAGACAGG--AGGGGGCAG-CAGGGCTTTTACTCCCCAGTGAGATGGGCTTGGGCTGGCCGTCGCCCTT--------GATAGATCATTTCAAGGT----GGGTGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647733 133 - 122678785 GCCCATAGAAAGCCCAGGGTGGA----GA-GGGGGCAGGCAGGATTGAGCACTGGGCTCTTCTTCCCTTGTAAGATCCCCAGGGCCTGGCTGTGCCCCTTCACTGATGGACGGACCGTGTCAAGATGGAGGGAGGGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e macFas5.chr19 55048529 6096 + 59248254 I a score=38426.000000 s hg38.chr19_GL949753v2_alt 159586 21 + 796479 CTACACACCCTTTAAAAAAAA s panTro4.chr19 59092294 21 + 63644993 GTACACACCCTTTAAAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969658 21 + 60714840 CTACACACCCTTTAAAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739175 21 - 106955855 CTATACACCCTTTAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029382 21 + 64156825 CTACTCACCCTTTAAAAAAAA i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47156401 21 + 51301725 Ctactcatcctttaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861048 21 + 50890351 CTACTCACCCTTTAAAAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443875 20 + 49145316 CTACATACTCATAAAAAAAA- i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I a score=7644.000000 s hg38.chr19_GL949753v2_alt 159607 4 + 796479 TAAT s panTro4.chr19 59092315 4 + 63644993 TAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969679 4 + 60714840 TAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739196 4 - 106955855 TAAT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156422 4 + 51301725 taat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861069 4 + 50890351 TAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443895 4 + 49145316 TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=136136.000000 s hg38.chr19_GL949753v2_alt 159611 112 + 796479 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaacatggaaaaacc s panTro4.chr19 59092319 112 + 63644993 TTTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcgggagttcgagatcagcctgaccaacgtggagaaacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969683 112 + 60714840 TTTggccaggcgtggtggctcatgcctgtaatctcagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttcgagattagcctgaccaacatggagaaacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739200 112 - 106955855 TTTggccaggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggttgggagttcgagatcagcctgaccaatatggagaaacc i nomLeu3.chr10 C 0 M 136 s papAnu2.chr19 47156426 111 + 51301725 gttggcc-ggtgtggtggctcgcgccggtaatcccagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctgaccaacaaggagacatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861073 112 + 50890351 GTTggctgggtgtggtggctcgcgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacaaggagaaacc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=24086.000000 s hg38.chr19_GL949753v2_alt 159723 28 + 796479 ctgtctctactaaaaatacaaaaaatta s panTro4.chr19 59092431 28 + 63644993 ccgtctctactaaaaatacaaaaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969795 28 + 60714840 ccgtctctactaaaaatacaaaaaatta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47156537 28 + 51301725 ccgtctctactaaaaatacgaaaaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861185 28 + 50890351 ccgtctctactaaaaatataaaaagtta i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e nomLeu3.chr10 102739312 136 - 106955855 M e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=191685.000000 s hg38.chr19_GL949753v2_alt 159751 169 + 796479 gccgggcatggtggtgagtgcctgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaggagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa--------------------------------aa s panTro4.chr19 59092459 167 + 63644993 gccgggcatggtggtgcgtgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtaagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969823 166 + 60714840 gccaggcatggtggtgcatgcctgtaattccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtaagccaagatcctaccgttgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaa----------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739448 170 - 106955855 gccgggcatggtggtgcatgcctgtaattccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggctgaggttgcggtgagccaagatcgtaccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaaaaaa-------------------------------aaa i nomLeu3.chr10 M 136 C 0 s papAnu2.chr19 47156565 201 + 51301725 gccgggcatggtggtgcatgcctgtaattccagctacccgggaagccagggcaggagaattgcttgaacccaggaggcggaggttgtggtgagccaagatcgtgctattacactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaaataaataaataaataaataaaataaaataaaaaaaatatatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861213 161 + 50890351 gccgggcatggtgatgcatgcctgtaattccagctactcgggaagccgaggcaggagaattgcttgaacccgggaggcgggtgttgtggtgagccaagatcgtgctattgtactccagcctgggcaacaagagcaaaactccgtctcaaaaaaa----------------------------------------aTATATA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e calJac3.chr22 45443899 0 + 49145316 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=7527.000000 s hg38.chr19_GL949753v2_alt 159920 5 + 796479 TTTAG s panTro4.chr19 59092626 5 + 63644993 TTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969989 5 + 60714840 TTTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739618 5 - 106955855 TTTAG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47156766 5 + 51301725 tatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861374 5 + 50890351 TGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443899 5 + 49145316 TTTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e macFas5.chr19 55048529 6096 + 59248254 I e rheMac3.chr19 60029403 1 + 64156825 I a score=566530.000000 s hg38.chr19_GL949753v2_alt 159925 280 + 796479 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa s panTro4.chr19 59092631 280 + 63644993 ggccaggt-----gtgacggctcacacctataacactagcactttggttggcctaggcaggcagatcacttgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagcaaggcgtggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctcgaacccgagaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccatctttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55969994 280 + 60714840 ggccgggt-----gtgacggctcacacctgtaatactagcactttggttggcctaggcaggcagatcacttgatgtcaagggtttgagaccagcccggccaacatggtgaaaccccatctctact--aaaaatat---aaaaattagccaggcgtggtggtgggtgcctgtaatcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcgagactccgtcCTTAA i ponAbe2.chr19 C 0 M 120 s nomLeu3.chr10 102739623 275 - 106955855 ggccgggt-----atgacggcccacacctgtaatactagcactttggttggcctaggcaggcagatcaattgatgtcaggggtttgagaccagcccggccaacatggtgaaaccccatctgtact--aaaaatat---aaaaattagcca-----ggtggtgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatcgctggaacctgggaggcagaggttgcagtg-----agatcacaccactgcactccagcctgggcaacagagcaagactctgtctttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054625 286 + 59248254 ggccaggc-----gtggtggctcacgcccgtaatcccagcactttgggaggctgaggtgggtggatcac--gaggtcaggagatcgagaccatcctggccaacacggtgaaaccccgtttctacttaaaaaaaattcaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcgcaccactgcactccagcctgggtgacagagcgagattctgtctt--a i macFas5.chr19 I 6096 C 0 s papAnu2.chr19 47156771 285 + 51301725 ggccTGGCATgatgtgatggttcatgcctgtaatcccaggactttggttggcctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtatggtggtgggcacctatagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861379 285 + 50890351 GGCCTGGTGTGATATggtggctcacgcctgtaatcccagcactttggttggtctaggtgggcagatcacttgatgtcaggggtttgagaccagcccggccaagatggtgaaaccccgtctctact--aaaaatat---aaaaattagccaggtgtggtggtgggcacctgtagtcccagctactcgagaggctgaggtgggagaatcgctggaacctgggaggcagaggttgcagtg-----acatcacaccactgcactccagcctgggtgacagagcgagattctgtcttaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45443904 253 + 49145316 ggccaggt-----gtggtggctcatgcttgcaatcccagcactttgggaggccaaggcaggtggatcacttgatgtcaggggtttgagaccagcctgggcaacatggtgaaacctcatctctact--aaaaatat---aaaaattagccggacatggtggtgggcacctgtaatctcagctactc--------------------------------gggaggcagaggttgcagtgagcagagattgcacaactgcactccagcctgggtgacagagcaagactccatctcaga i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=5603.000000 s hg38.chr19_GL949753v2_alt 160205 21 + 796479 aaataaataacatttaaaaaa s panTro4.chr19 59092911 21 + 63644993 aaataaataaaatttaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739898 20 - 106955855 aaataaataaaa-taaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054911 9 + 59248254 aaaaaaaaa------------ i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47157056 9 + 51301725 aaaaaaaaa------------ i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46861664 21 + 50890351 aaaaaaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 I 127 s calJac3.chr22 45444157 20 + 49145316 -aaaaaataaaataataaTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=-754.000000 s hg38.chr19_GL949753v2_alt 160226 4 + 796479 TTAa- s panTro4.chr19 59092932 4 + 63644993 TTAa- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739918 4 - 106955855 TTAa- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054921 3 + 59248254 tta-- i macFas5.chr19 I 1 I 3 s papAnu2.chr19 47157066 3 + 51301725 tta-- i papAnu2.chr19 I 1 I 2 s calJac3.chr22 45444177 4 + 49145316 -TAAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e chlSab2.chr6 46861685 127 + 50890351 I e rheMac3.chr19 60029403 1 + 64156825 I a score=23499.000000 s hg38.chr19_GL949753v2_alt 160230 12 + 796479 ttttttgtagag s panTro4.chr19 59092936 12 + 63644993 ttttttgtagag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102739922 12 - 106955855 ttttttgtagag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054927 12 + 59248254 ttttttgtagag i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47157071 12 + 51301725 ttttttgtagag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46861812 12 + 50890351 ttttttgtagag i chlSab2.chr6 I 127 C 0 s calJac3.chr22 45444181 12 + 49145316 ttttttgtagag i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e ponAbe2.chr19 55970274 120 + 60714840 M e rheMac3.chr19 60029403 1 + 64156825 I a score=71096.000000 s hg38.chr19_GL949753v2_alt 160242 32 + 796479 acagggtctcactatattgcccaggctggtct s panTro4.chr19 59092948 32 + 63644993 acagggtctcactgtattgcccaggctggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970394 32 + 60714840 acagggtctcactatattgcccaggctggcct i ponAbe2.chr19 M 120 C 0 s nomLeu3.chr10 102739934 32 - 106955855 acagggtctcactatattgcccaggctggtct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55054939 32 + 59248254 acagagtctcactatattgcccaggctggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157083 30 + 51301725 ac--agtctcactatattgcccaggctggtct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861824 32 + 50890351 acagagtctaacgagattgcccaggctggtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444193 32 + 49145316 acagggtctcactatattgcccaggctggcct i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C e rheMac3.chr19 60029403 1 + 64156825 I a score=246399.000000 s hg38.chr19_GL949753v2_alt 160274 82 + 796479 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattatacaagtatgagccactgcaccaggc s panTro4.chr19 59092980 82 + 63644993 taaactcctggcctccagcagtcctcccactatgacctcccaaagcgctgggattttacaagtatgagccactgcaccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970426 82 + 60714840 taaactcctggcctccagcaatcctcccactatggcctcccaaagcgctgggattatacaagtatgagccactgcaccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102739966 82 - 106955855 taacctcctggcctccagcaatcctcccactgtgacctcccaaagcgctgggattatacaagtatgagccactgcaccagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029404 82 + 64156825 TAAActcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55054971 82 + 59248254 taaactcctggcctccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157113 82 + 51301725 taaactcatggccgccagcaatcctcccgctatgacctcccaaagcgctgggattatacaagtgtgagtcactgcaccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861856 82 + 50890351 taaactccaggcctccagcaagcctcccactatgacctcccaaagcgctgggattatacaagtatgagtcactgcaccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444225 79 + 49145316 taaactcctggcctccagcaatcctcccaccatggcctcccaaagcactgggatta---gattatgaggcactgcgccAAGT i calJac3.chr22 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19647866 0 - 122678785 C a score=280280.000000 s hg38.chr19_GL949753v2_alt 160356 94 + 796479 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCGGGGCTGGGGTTCA s panTro4.chr19 59093062 94 + 63644993 cTACACAACCCTTTTTCCATCCAGGTACCACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGAACGGCTCCTTCTGCCGGGCTGGGGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970508 94 + 60714840 cTACACAACCCTTTTTCCATCCAGGTACCACAGCCTGACCCATTTCCTCTGGGCCTAGGGTTGGGAAGGGCTCCTTCTGCCGGTCTGGGGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740048 94 - 106955855 cTAAACAACCCTTTTTCCATCCAGGTACGACAACCTGACCCATTTCCCCTGGGCCTAGGGTTGGGATCGGCTCCTTCTGCCCGTCTGGCGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029486 94 + 64156825 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i rheMac3.chr19 C 0 I 298 s macFas5.chr19 55055053 94 + 59248254 cTACACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCCATGAGTTGGGAACGGCTCCTGCTGCTGGTCTGGGGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157195 94 + 51301725 ctacACAACCCTTTTTCCATCAAGGTACCACAACCTGAGCCACTTCCCCTGGGCTGTGAGTTGGGAACGGCTCTTGCTGCTGGTCTGGGGTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46861938 94 + 50890351 cTAGACAACCCTTTTTCCATCAAGGTACCACAACCTGACCCACCTCCCCTGGGCCTTGAGTTGGGAAGGGCTCCTGCTGCTGGTCTGGGGTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45444304 91 + 49145316 CTACACAACCCTTTCTCCACCCAGGT---ACAACCTGCCCCACTTCCCCTGGGCCTAGGGTTGGGAAGGGCTCCTGCCGCAGGTCTGGGGTTCA i calJac3.chr22 C 0 I 4 s canFam3.chr1 19647866 81 - 122678785 CTGCACAA--TGTCTTCCCTTCAGGTTGCACTACCTGGCCCTCTTCTC---GGCCCTGGGCT--------CCCCAGCTGCTGGTCCAGGATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=40679.000000 s hg38.chr19_GL949753v2_alt 160450 13 + 796479 GGCAC----CATCCCTT s panTro4.chr19 59093156 13 + 63644993 GGCAC----CATCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970602 13 + 60714840 GGCAC----CATCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740142 13 - 106955855 GGCAC----CATCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029878 13 + 64156825 GGCAC----CACCCCTT i rheMac3.chr19 I 298 C 0 s macFas5.chr19 55055147 13 + 59248254 GGCAC----CACCCCtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157289 13 + 51301725 GGCac----cacccctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862032 13 + 50890351 GGCAC----CACCCCtt i chlSab2.chr6 C 0 I 565 s calJac3.chr22 45444399 17 + 49145316 GGCACTTCTTGTCCCTT i calJac3.chr22 I 4 C 0 s canFam3.chr1 19647947 12 - 122678785 -TCAC----TGTCCCCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=837.000000 s hg38.chr19_GL949753v2_alt 160463 3 + 796479 CTT- s panTro4.chr19 59093169 3 + 63644993 CTT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970615 3 + 60714840 CCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740155 3 - 106955855 CTT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029891 2 + 64156825 -TT- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55055160 2 + 59248254 -tt- i macFas5.chr19 C 0 I 304 s papAnu2.chr19 47157302 2 + 51301725 -tt- i papAnu2.chr19 C 0 I 302 s calJac3.chr22 45444416 3 + 49145316 CTC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647959 3 - 122678785 -CTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=453905.000000 s hg38.chr19_GL949753v2_alt 160466 204 + 796479 GCTCTTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACccacagccagccaacggcctgtatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggacaaaggaggatccctttatctgagtccatcccatcttgccctgttccacttcaattctccttcagcat s panTro4.chr19 59093172 204 + 63644993 GCTCCTCTACATCCTGCCCAATTGGTGGC-------CACTCCTTCAGTCATCCTAAATGC-GCGTTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCAACGGCCTGTATCAAGCCA-CCACAGTTTGTCACCTGGACTC--------------------------------------GGACAAAGGAGGATCCCTTTATCTGAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970618 204 + 60714840 GCTCCTCTACATCCAGCCCACATGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCGTTTCCTGCTGCAGCTGA--GACCTACccacagccagccaacagcctgcatcaagcca-ccacagtttgtcacctggactc--------------------------------------ggataaaggaggatccctttatctaagtccatcccatcttgccctgttccacttcaattctccttcagcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740158 204 - 106955855 GCTCCTCTACACCCTGCCCACATGGTGGC-------CGCCCCTTCAATCATCCTAAATGC-ACATTTCCTGCTGCAACTCA--GACCTACCCACAGCCAGCCGACAGCCTGCATCAAGCCA-CCACAGTTTGTCACCTGGACTT--------------------------------------GGATAAAGGAGGATCCCTTTATCTAAGTCCATCCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60029894 238 + 64156825 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGT-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCAGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55055466 238 + 59248254 GCTCTTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCCATCATCCTAAATGC-GCATTTCCGGCTGCAGCTCA--GACCTACCCA----CAGCCGACAGCCTGTATCAAGGCA-CCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCTCTTTATATAGGATAAAGGAGGATCCCTTTATCCGAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCCTCAGCAT i macFas5.chr19 I 304 C 0 s papAnu2.chr19 47157606 239 + 51301725 GCTCCTCTACATCCTGCCCACACGGTGGC-------CACTCCTTCAATCATCCTAAATGC-GCATTTCCTGCTGCAGCTCA--AACCTACCCA----CAGCCGACAGCCTGTATCAAGGCACCCACAGTCTGTCACCTGGACTTGGATAAAGGGATCCTTTTTATTTGGATCCCTTTATATAGGATAAAGGAGGATCCCTTTATCCAAGTCCATTCCATCTTGCCCTGTTCCACTTCAATTCTCCTTCAGCAT i papAnu2.chr19 I 302 C 0 s calJac3.chr22 45444419 200 + 49145316 GCTCCTCTACATCCTGCCCACAC-ACGGC-------CACTACTCTGACCATCCTAAATGCGGGGTTTCCTGCTGCAACTCCCTGCCCTACCCA----TAGCCAACAGCCTGCACCAAGCCG-T--CAGTTTGTCACCTGGACTC--------------------------------------AGATAAAGGGACCCTCCTTTATCCCAGTCCATCCCATCTTGCCCTGATCCACTTCAATTCTCCTCCAGCAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19647962 176 - 122678785 GCTCTTCTACATCCTGCCCCCACTGCTGTAAAGAAGAACTCCTCAAAGTGTCCCAAATGCAGCATTTCCTGCTGGAGCTCT--GA-----------------------CTGTATCAAGCTG-CCACTGCCAGTCAGCAGGACTT--------------------------------------TGATCAAGGAGACCATCCT----------CATCCCTTCTTGCCCT-TTCTGTGACAATTCT--GTCAGTAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I e chlSab2.chr6 46862045 565 + 50890351 I a score=95441.000000 s hg38.chr19_GL949753v2_alt 160670 67 + 796479 ccagaacgagttttctttcttttcttttctttttttttt-gagatggaatcttgcccgggaaggccca s panTro4.chr19 59093376 68 + 63644993 CCAGAACGAGTTTTAtttcttttcttttctttttttttttgagatggaatcttgcccgggaaggccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970822 67 + 60714840 ccagaaccagtttttgttcttcttttttttttttttttt-gagatggaatcttgcccgggaaggccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740362 61 - 106955855 CCAGAACGAGttttcttt------tcctttttttttttt-gagatggaatcttgcctgggaagtccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030132 60 + 64156825 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055704 60 + 59248254 CCAGAACGAGTA-------tttttttatttctatttttt-gagacggagtctcgcccggggaggccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157845 63 + 51301725 TCagaacaagtatt--ttttttttttttttttttttttt-gagacggagtctcgctctgt--ggccca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45444619 60 + 49145316 CCAGAAT-AGTGT------TTTTTTTTTTCTTTTTTTTT-GAGATGGCATCTCACCTGGGGAGGCCCA i calJac3.chr22 C 0 M 576 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e chlSab2.chr6 46862045 565 + 50890351 I a score=428579.000000 s hg38.chr19_GL949753v2_alt 160737 280 + 796479 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagacggagttttaccatgttggccaggatggtctcaaactcctaacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggcctagaatgagtatttctattt--gttt s panTro4.chr19 59093444 276 + 63644993 ggctggagtgcaatggcgggatcttggctcactgcaacctccaccttccaggttcaagcaattatcctgcctcagcctcctgagtagctgggattacaggtgtgagccaccacacccggctcatttttg-tatttttagtagagatggagttttaccatgttggccaggatggtctcaaactcttgacctcaggtgatctacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgcagctggccTAGAACGAGTAtttctattt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55970889 279 + 60714840 ggctggagtgcaatggtaggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcagcctcc-gagtagctgggattacaggcatgcgctaccacacccggctcatttttg-tatttttagtacagacggggttttaccacgttggccaggatggtctcaaactcctgacctcaggtgatctacccacgtcagcctcccaaagttctgggattacaggcgtgagccaccgcagctggcctagaacgagtatttctatgt--gttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740423 280 - 106955855 ggctggagtgcaatagcgggatcttggctcactgcaacctctaccttccaggttcaagcaattctcctacctcagcctcctgagtagctgggattacaggtgtgagccaccacacctggctcatttttg-tatttttagtagagacagggttttaccatgttggccaggatggtctcaaactcctgacctcaggtgatctactcgcattagcctcccaaagtgctgggattacaggtgtgagccaccgcagctggccTAGAACGAGTAtttctattt--attt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030192 275 + 64156825 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-tctggctcatttttt-tatttttagtagagatggagttttaccatgtcggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55055764 275 + 59248254 ggctggagtgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccac-actggctcatttttt-tatttttagtagagatggagttttaccatgttggccagactggtctcaaactcctgacctcaggtaatccacccgcatcagcctcccaaagtgttgtgattaaaggcgtgagccaccgcacctggccTAGAACGAGTAtttctattt------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47157908 258 + 51301725 ggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcccgccagtctcctgcctcagcctcccgagtagctgggactacaggcgcccacaaccgcgcccggctaattttttgtatttttagtagagacgaggtttcaccg------------tggtctcgatctcctgacctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccta-------tttttttattttt---- i papAnu2.chr19 C 0 I 176 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=57530.000000 s hg38.chr19_GL949753v2_alt 161017 32 + 796479 atttatttttgagatggagttttgctcttgtt s panTro4.chr19 59093720 32 + 63644993 atttatttttgagatggagttttgctcttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971168 32 + 60714840 atttatttttgagacggagttttgctcttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740703 32 - 106955855 atttatttttgagacggagttttgctcttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030467 32 + 64156825 atttatttttgagacggagtttcactcttgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056039 32 + 59248254 atttatttttgagacggagtttcactcttgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158342 32 + 51301725 atttatttttgagacggagtttcgctcttgtc i papAnu2.chr19 I 176 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M e chlSab2.chr6 46862045 565 + 50890351 I a score=149642.000000 s hg38.chr19_GL949753v2_alt 161049 66 + 796479 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa s panTro4.chr19 59093752 66 + 63644993 gcccaggctggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971200 66 + 60714840 gcccaggttggagtgcaatggtacgatctcagctcaccacaacctccgcctcctgggttcaagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740735 66 - 106955855 gcccaggctggagtgcaatggtacgatctcagctcaccaaaacctctgcatcctgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030499 66 + 64156825 acccaggctggagtgcaatggcgcgatgtcagctcaccacaacctctgcctcctgggttcaagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056071 66 + 59248254 acccaggctggagtgcactggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158374 66 + 51301725 acccgggctggagtgtagtggcgcgatctcagctcaccacaacctctgcctcctgggttcaagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862610 66 + 50890351 gcccaggctggattgcgatggtgggatcttggctcactgcaacctccaccttccaggttcaagcaa i chlSab2.chr6 I 565 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C e calJac3.chr22 45444679 576 + 49145316 M a score=562965.000000 s hg38.chr19_GL949753v2_alt 161115 194 + 796479 ttctcctgcctcagcctcccgagtagctgggattacaggtatgtgccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggca-ttacaggcgtgagctactgtgcccag- s panTro4.chr19 59093818 194 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggtatgcaccaccacgcccagctaatcttttgtatttttagtagagacagggtttctccattttggtcaggctggtcttgaactcccggcctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971266 194 + 60714840 ttctcctgcctcagcttcctgagtagctgggattacgggcatgcgccaccatgcccagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctaccgtgcccag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740801 194 - 106955855 ttctcctgcctcggcttcccaagtagctgggattacaggcatgcgccaccacgcccagctaattttttgtatttttagtagagacaaggtttctccattttggtcaagttggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctggga-ttacaggcgtgagctactgtgcccag- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030565 194 + 64156825 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgctcagctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056137 194 + 59248254 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcgccaccacgcccggctaattttttgtatttttagtagagacagggtttctccattttggtcaggctggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158440 194 + 51301725 ttctcctgcctcagcttcccgagtagctgggattacaggcgtgcaccaccacacgcagctaattttttgtattttcagtagagacagggtttctccattttgatcaggctggtctcaaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctggga-ttacaggcgtgagccaccgcgcccgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862676 192 + 50890351 ttctcctgcctcaacctcccaagtagctgggattacaggtgtgagccaccacact-ggctca-tttttgtatttttagtagagacagagttttaccatgttagccagactggtctcaaactccccacctcaggtgatccgcctgcctcagcctcccaaagtgttggga-ttacaggcatgagccaccgcgcccgg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445255 193 + 49145316 ttctcctgcctcagccttcccagtagctgggattacaggtatg--ccaccacacctggctca-tttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgactgcaggtgatccacctgcctcagcctcccaaagtgctgggatttacaggcgtgagcctctgcacccggc i calJac3.chr22 M 576 C 0 e mm10.chr7 3688744 1564 + 145441459 I e canFam3.chr1 19648138 0 - 122678785 C a score=460246.000000 s hg38.chr19_GL949753v2_alt 161309 149 + 796479 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttccagcagatctcaatcctccacgggaagaagtccaatgtcctcacggtctccagccaggcctagcacggtgtcag s panTro4.chr19 59094012 149 + 63644993 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAATCCTCCACGGGAAGAAGTCCAGTGTCCTCAAGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971460 149 + 60714840 ccagaacgagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaaaaatcccctcttacagcagatctccgtcctccacaggaagaagtccaatgtcctcacggtctccagccaggcctagcatggtgtcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102740995 149 - 106955855 ccAGAACGAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAAATCCCCTCTTCCAGCAGATCTCAGTCCTCCACGGGAAGAAGTCCAACGTCCTCACGGTCTCCAGCCAGGCCTAGCACGGTGTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030759 146 + 64156825 ccagaacaagtatttttaaacatttaaaactggtcacattgcctcttctggcagcaaaccaatgatcccctcttccagcagatctccgtcctccgtgg---gaagtccaaagtcctcacggtcgccagccagacctagcatggtgtcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056331 146 + 59248254 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAATGATCCCCTCTTCCAGCAGATCTCCGTCCTCCGTGG---GAAGTCCAACGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158634 149 + 51301725 ccagaacaagtatttttaaacatttaaaactggTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCTCTCTTCCAGCACATCTCCGTCCTCCGTGGGAAGAAGTCCAAAGTCCTCACGGTCGCCAGCCAGACCTAGCATGGTGTCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46862868 149 + 50890351 ccAGAACAAGTATTTTTAAACATTTAAAACTGGTCACATTGCCTCTTCTGGCAGCAAACCAAAGATCCCCTCTTCCAGCAGATCTCAGTCTTCCATGGGAAGAAGTCCAAAGTCCTCACGGTCACCAGCCAGACCTAGCATGCTGTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445448 148 + 49145316 cCAGAACAAGTATTTTTAAACATCTAAAACTGGTCACATCTCATCATTTGGCAGCAAACCAAAAATCACCTC-CCCAGCAGCGCTCAGTCCTCCATGGGAAGAAGTCCAGAGTCCTCATGGTTGCTGGCCAGGCCTAGCACGGTCTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19648138 111 - 122678785 CCAGAGCA--TATTTCCAAACACATAAACCTGGTCCCATTACCTCTTCTGGCAACAAACCAAAAGACCACTC--CCAGTGGCTCCTGGGCCCC----ATAAGAAGCCCAAAGCCCACAC------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3688744 1564 + 145441459 I a score=929820.000000 s hg38.chr19_GL949753v2_alt 161458 298 + 796479 ccctgctgcctGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAATGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctagg----attctgtttttacccctcttcccaggtg s panTro4.chr19 59094161 298 + 63644993 CCCTGCTGCCCGTTCCCTTTTGCTCGTCC--------------CAGAAA----GTGGATGTGGCTGGTGTA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTGCG-GCCTGAAACGCTCCTCCACGAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCACTGAGCT--CCCACAGGGCACACTGAATGCTGGGAAGGC--CA--CTCCCTACCTAGCATGACTGCTGTGTTCACGGATAAGCCGC--------------CAG-----------TAGGAAACCAtgactctgtgggtctggggtgggccctggg----attctgttttcacccctcttcccaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971609 298 + 60714840 ccctgctgcccgttccctttTGCTCGTCC--------------CAGAAA----GCGTATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACA-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACCGCTGAGCT--CCCACGGGGCACACTGAATGCTGGGGAGGC--CA--CTCCCTACCTAGCATGACTGCCGTGTTCACGGATAAGCTGC--------------CAG-----------TAGGAAACCGtgagtctgtgggtctggggtgggccctggg----attctgttttcacccatcttcccaggtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741144 300 - 106955855 CCCTGCTGCCCATTCCCTTTTGCTCGTCC--------------CACAAA----GTAGATGTGGCTGGTGCA--GCCTGTGGAACCCAGCCTGCTCCCCTCCACACA-------TCCTACG-GCCTGAAATGCTCCTCCACTAACCCCTCTCTCATCCAACCCACTGCTGCC-ACCGCTGAGCT--CCCACGGGGCACATTGAATGCTGGGAAGGCCACA--CTCCCTACCTAGCATGAGTGCCGTGTTCGCGGATAAGCCGC--------------CAG-----------TAGGaaatcgtgactctgtgggtctggggtgagccctggg----attctgttttcacccaccttcccaggtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60030905 303 + 64156825 ccctgctgcccattcccttttgctcttcc--------------cAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGgaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056477 303 + 59248254 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGaaactgtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47158783 303 + 51301725 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGCATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTACG-GCCTGAAATGCTCCTCCTCTAACCCTTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGTGGGGCACACTGAAGGCTGTGGAGGC--CG--CTCCCTACCTAGCATGACCGCTGTGTTCACAGATAAACCTC--------------CAG-----------TAGGAAACTGTGACTCTGTGGGTCTGGGGTGGGCCCTGGG----AGTCTGTTTTCACCCATCTTCCCAGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863017 303 + 50890351 CCCTGCTGCCCATTCCCTTTTGCTCTTCC--------------CAGAAA----GCGGATGTGGCTGGTGCA--GCAGGT-GAACCCATCCTGCTCCCCTCCACACACGT-CATCCCTATG-GCCTGAAATGCTCCTCCTCTAACCCCTCTCTCATCCAACCTACTCCTGCC-ACTGCTGAGCT--CCCGCGGGGCACGCTGAAGGCTGTGGAGGC--CG--CTCTCTACCTAGCATGACCGCTGTGTTCACAGATAAGCCTC--------------CAG-----------TAGGAAACTGtgactctgtgggtctggggtgggccctggg----agtctgttttcacccatcttcccgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445596 299 + 49145316 TCCTGCTGCCGGTTCCCTTCTGCTCCTCC--------------TCGAAA----GCTGATGTGGCTGGTGCA--GTCTGCAGAACCCAGCCTGCTCCTCTCCACACA--T-GGTCCCTACG-GCCTGAAATGCTCCTCCTCTAACCC--CTCTCACCCAGCCCACTCCTGCC-ACTGCTAAGCT--CTTGCAGGGAACACTGAATGCTGGGGAGCC--CA--CTGCCTACCTAGCATGACCACTGGGTTCACTGATAAGCCGC--------------CAG-----------GAGGAAACCATGACTCTGTGGGTCT-TGGTGGGCCCTGGG----AGTCTGTATTCACTCGTTTTCCCAGGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690308 333 + 145441459 CCCTATGGCCTGGCTTCCGTTGCCCTTTCAACCACGTGTTATTCAGAAAGTGCGTGGACGTGGCAAGCATA--GTTTGCAATGCCCAGCCTGTTCCTATCTACATGTGTAGGTTCGTACACACCCAAAAGGCACTTCTTCCAA-----TGCACAGCTGACCAATCTCTGCCTAATGTTGTGTC--TGCCATAAGAACAAAGATGTCTGGAGAAAC--CA-GTTCTCCACCTGGCTGGAC-----TGTCCATGGCTACGTTGCTGGAGCCTAGAACATAG-----------CAAGAGCTCACGACTGTTGTAGTCTGGGCTAGGCACTGAGGACCACTCACTTCTTGCCC-TTTTCTTAGGTG i mm10.chr7 I 1564 I 219 s canFam3.chr1 19648249 313 - 122678785 --CTTGGGCCCATTCCCCTTCCTTCTCCCGA------------TGTACA----CTCGCTATGGCTGGCACACCGTTGATGCAACCCAGCCTGCTcccttccacaccc---tggtcctaca-tcctgaaaggctctccctccaa-----ctctttgctgaccaactcctgcc-tgtccttGCCTTGCCACCCGAGAACCTGGGACGCTGAGGACAC--TGGGTTCACAACCTTGTGTGACTTTCCTGTGCCCTGATATGTTGC--------------TGGAGCCTTGCACATGGGaaatcctgacttt-tcagtctggggtggggcctggg----aatctgctttcactcattctcccaggtg i canFam3.chr1 C 0 C 0 a score=2637026.000000 s hg38.chr19_GL949753v2_alt 161756 774 + 796479 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gttccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACC-TATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGCCACT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCACTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCATTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG----GACAGGAGGGTGGATGTAGGGACCGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAT-------GA----GGTTAAGAGAAGCTTCAGG s panTro4.chr19 59094459 777 + 63644993 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccaatGGCACCTACTGTTACCCTGTGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAAGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCG--------------------GGGAGTCGCT---GAAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAGCTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAGAAACACACACCAACAG---AGAAC-------GA----GGTTAAGAGAAGCTTCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55971907 781 + 60714840 atTAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctgc----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACCCTATGTGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAACGGCATGTGAATGGGGAATGCTGTTTCCAGGGCAGCAAGTGAGGTGACGTCCCAC-CCCCAGGGTGTGTTGGAGGTAAAATCCCA--------------------GGGAGCCGCT--GGAGGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGCGGCAAGCCCCAAGTCTGACCTTCAGTGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCACGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCGCTCACTCCACGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--GGGACAGGAGGGTGGACGTAGGGACAGAATGGGTATGACTGAAACAGTGGGAGAAGAGGCTCAGCCACACAGAAACACACACCAACAGACAAGAAT-------GA----GGTTAAGAGAAGCTTCGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102741444 779 - 106955855 atTAGGACCTAGACCTGGA---T-CCctagtttt---gtgccctt-caccaagtaccttctccccagagctggtttttctcctttgcaaaatagctggctac----agagattcaaggacagcatgttggtaaaccacccagctg----ggcctctggcacaccgcaagcacccagtGGCACCTACTGTTACACTATGTGGGT-------------TATTTCCCCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTGCCCAAGGGCATGTGAATGGGGAATGCTGTGCCCAGGGCAGCAAGTGAGGTGACGCCCCAC-CCCCAGGGTGTGTAGGAGGTAAAATCCCG--------------------GGGAGCCGCT---GGAGGGG-------------GAGGTAAAGT-GGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGGAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGCTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACTCACTCCATCAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCGTTTAGAGACAGAAACACAGAAGGGCAGAGAG--AGGACAGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAACAGTGGGAGAAGAGGCTCAGCCACATAAAAACACACACCAACAGAGAAGAAT-------GA----GGTAAAGAGAAGCTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031208 777 + 64156825 actAGGAGCCAGACCTGGA---TGCCctagtttt---gtgccctt-caacaagtaccttttccccagagctggtttttctcctttgcagaatagctagctac----agagattcaaggacagcatgttggtaaaccacccggctg----ggcctctggctcacagcaagcacccaatGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55056780 777 + 59248254 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTTTCCCCAGAGCTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAATCACCCCGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------CGGAGCGGCT---GGAGGGG-------------GAGGTAAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGTGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCCCATTCATTCAGAGACAGAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GATTCAGAGAAGCTTCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159086 777 + 51301725 ACTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACTTTTTCCCCAGAGCtgctttttctcctttgcaaAATAGCTAGCTAC----AGAGATTCAAGGACAGTATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTAACCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCCATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------gggagcggct---ggagggg-------------gaggtaaagtggggag----gtgaaggggcccacagggaggctggagg-ggagTGGCAAGTCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GAG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCGGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCCCAACTCTCCTCATTCATTCagagacagaaacacagaagggcagagagagaggacTGGAGGGTGGATGTAGGGACGGAATGAGTATGATTGAAATG--GGGAGAAGAGGCTCAgccacacagaaacacacagcaACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46863320 777 + 50890351 aCTAGGAGCCAGACCTGGA---TGCCCTAGTTTT---GTGCCCTT-CAACAAGTACCTTCTCCCCAGAACTGGTTTTTCTCCTTTGCAGAATAGCTAGCTAC----AGAGATTCAAGGACAGCATGTTGGTAAACCACCCAGCTG----GGCCTCTGGCTCACAGCAAGCACCCAATGGCACCTACTGTTACCCCACATGGGT-------------TATTTCCTCACCCCA-GGAGGAGCTGGGAGGTGAAGACCTG-CCAAGAGCATGTGAATGGGGAACCCTATGCCCAGGGCAGC-AGTGTGGTGGCGGCCCAC-CCCCAGGGTGTGCAGGAGGTAAAATCC----------------------GGGAGCGGCT---GGAGGGG-------------GAGGTGAAGTGGGGAG----GTGAAGGGGCCCACAGGGAGGCTGGAGG-GGAGTGGCAAGCCCCGAGTCTGACCTTCAGCGTCAGTAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAGGTCCAGGCCAGAGCCAGGGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGTGCGTTGTGTTGGGCACAGAAGTCTCAGCCTTGGCCACCCACTCCCCGAGTCCAGCCACCAATCCTCCCGCAACTCTCCCCATTCATTCAGAGACAAAAACACAGAAGGGCAGAGAGAGAGGACTGGAGGGTGGATGTAGGGATGGAATGAGTATGACTGAAATG--GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAC-------GA----GGTTCAGAGAAGCTTCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45445895 765 + 49145316 TGAAGGAGCCAGACCTGGG---TGTCCTAGTTTTTGAAGGTACTT-CACCAAGTACCTTCTCCCCAGAGCTGGTTTTTCTCCTTTGCAACACAGCTGGCTGC----AGAGATTCCAGGAGAGCACGTGAGTAAA-CACCCAGCTG----GGCCTCTGGCACACCACAAGCACTTAATGGCACTGACTGTTACCCTCCATGGGC-------------CATTTCTTCACCCCA-GGAGGGGCTGAGAGGTGAAGACCTGCCCAGGGGCATGTGAATGGGGAATCCTA--CCCAGGGCAGCAGGTGGGGTGATGTCCCAC-CCCCAGGGTGTGTGGGAGGTAAAATCCCC--------------------CGGAGCAGCT---GGAGGGGAGTAGTGAGCCCCGAGTCAGAGTAGTGAGCCCCGAGTCGGAG----TAGTGAGCCCCGAGTCGGAGTAGTGAGCCCCGAGTCTGACCTTCAGCGTGAGCAGCAGCTGGACGGCATTGGTGAAGGGCGTGGGAGTAGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAACAGGAGATAGGAGAAAGTCCAGGCCAGGGCCAGAGCGTGGCAGGAGCT-GGG-CAAAAGCAGGAGGCGCGTCGTGGTGGGCACAGAGGTCTCGGCCTTGGCCTCCC-----------------------TGTCCCCCAGCTCTCCCCATTCGTTCAGAGACAGAA--ACAGACGGGCAGAGAG--AGGACTGGAGGGTGGATG--GAGATGGAATGAGTATGACTGAAAC---GGGAGAAGAGGCTCAGCCACACAGAAACACACAGCAACAGAGAAGAAT-------GA----GGTTCAGAGGAGCTTCGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3690860 723 + 145441459 atgaaaaaCCAAACCTGCACTTTGTCCCAGCTTT---GAGCCCTTGGGCCGGATACCTTCTCTATAGAG-TAATTTTCCTCCTTGG-AGGACGGTTTGCTAC------AGACTCAAGAAGAGCATGTTAGCAAAACACACTGGGGAGGAAGATTCTAGGT--------GTGCCAAATGGC---TTGTGATAGAGCACTCAGGT-------------TATCTCCTTATCCTG-CAATGAGTGGAGAGGTGAAGACTTGCTCCAGAGGATGTGGGAGGTGAACTCTGTCCCCAG-------GGAGAAATGAAGTCCCAA-GCTTAGGGTTTGTGAAAGATAAAACTCCACAGCCCT--CCCCCTACTATGAGAAAGTCT---GGGAGGA-------------GA----AAGCAAGGAG----GCTCCCCAGCTCCCAGGGAGACTAAAA--GAAGTAGTGTTCGCCAAGTCTCACCTTCAGTGTCAACAGCAGCTGGACAGCATTGGTGAAGGGCGTGGGAGTGGGCAGGCCCAGCAGGCTGAGGGCTCGGAAGAAGAGGAGATAGGAGAAGGTCCAGGCAAGAGCCAGGGCATGGCAGGAGCTAGGA-CAGAGGTGGGAAGT-CATAATGTTGGGTACAGGGACCTTAGCCTCTGTTTCCTTCTCCTGAGAT----------ACCCACCCCCGCCCCTGCCCA--CATTCAGACAGAGAA-----GAAGAGGTGAGAA----GACTGGTGAGT-----------------------------AACAGAGACAGAAGAGGCACAGCCAGAGATA-------------AGAAAAGAAT-------GACCGGCATTAAGAGAAGCTTCTGG i mm10.chr7 I 219 I 59 s canFam3.chr1 19648562 700 - 122678785 atAAAGAGCCAGACATCGG---TGTCCTGGTTCT---GTGCCCTT-AGAGAAGTGCTTTCTCTCCAAAGCTGTTTCTCCTACCTTGCTAAATGGTTTGCTACCAACACATGCTCCTGGAGAACACGTTGGTAAAGCACTTAGCT-----CACCTCTGGCAAATGGCAAACACC----------TACGGTTACATTACATAGATGGGGGTGTGGGTGTACTTCTCTACCCCAGGGAATAGCTGAGAGGTGAAGATCTGCCCCAGAGCATG------------------------------AAGGAGGTACCTTCCCACGTCCTGGGGTGCGGGGGAGGTAAGACCCCACTTCCCCTGCTCCCCAC---GGGAGTAGGTCGGGAAGGAG-------------GAGGTGAAAA-TGGGA----GTTCAAGGGTACAAAGAGGGGCTGGAGG-GG--------------CATCTGACCTTGAGTGTGAGCAGCAGCTGAACCGCATTGGTGAAGGGTGTGGGGGTGGGGAGGCCCAGCAGGCCGAGCGCACGGAAGAACAGCAGGTACGAGAAGGTCCAGGCCAGGGCGAGGGCGTGGCAGGAGCT-GGGACAGAGGAAGGCCGCAGGCTGTGTTTGGTGCAGGGCCCTT-GCCTCTGCCTCCC----CCAGAGTCTAGCTCCAGAACCTCCCCCACCACCACTCC-------------------------------------AAAAATGGGGGGTGGT--------------------------------AGAAGAAGGGGCGCAGCCCCACAGAAATGTGCCATGCCAGAGAAGAGCATGAGAAGG----GGTCAGGAGAAGCTTTAGG i canFam3.chr1 C 0 I 1 a score=402706.000000 s hg38.chr19_GL949753v2_alt 162530 126 + 796479 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCGAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- s panTro4.chr19 59095236 126 + 63644993 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACTTCTCTCCATG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972688 126 + 60714840 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAGGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCCAGGCCAGCAGACACACTGTCCACCTCTCTCCATG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742223 126 - 106955855 TGAAGACCCTGCAATCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGAGAGGTGGATATGA-ATGAATATGAACGGTGGCTGGGCCAGCAGACACAACGTCCACCTCTCTCCATG---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60031985 126 + 64156825 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057557 126 + 59248254 TGAAGACCCTGCACTCCTCCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159863 126 + 51301725 TGAAGACCCTGCACTCCTccgctttttctttatttccaaggTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATATGAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864097 126 + 50890351 TGAAGACTCTGCACTCCTCCGCTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGGTGGATATGA-ATGAATCGCAACGGTGGCAGGGCCAGCAGACACACCATCCACCTCTCTCCATG---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446660 122 + 49145316 TGAAGACCCTGCAATCCTTCACTTTTTCTTTATTTCCAAGGTCCAGGGCTCAAGAAGAGGGGGCTGGAT-----ATGAATATGAATGGTGGCGGGGCCAGCAGACACACTGTCCTTTTCTCTCCATG---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649263 125 - 122678785 TGAAAACCCACAGGGCCTCCATCTTTTCTG------CAGGAGGCGAGAAAAAAGGAGGGAGAAAGAGACATAATACAAACACGAATGGTGGCAGGGCCAGCACACAAACGCCCCTTCCTCCTGAATACAGG i canFam3.chr1 I 1 C 0 e mm10.chr7 3691583 59 + 145441459 I a score=125141.000000 s hg38.chr19_GL949753v2_alt 162656 35 + 796479 ACATGGATGTAGCGGACTGGGACAAACACACAGGG s panTro4.chr19 59095362 35 + 63644993 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972814 33 + 60714840 ACATGGATGTAGCGGACTGGGACAA--ACACAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742349 35 - 106955855 ACGTGGATGTAGCGGACTGGGACAAACACACAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032111 35 + 64156825 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057683 35 + 59248254 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47159989 35 + 51301725 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864223 35 + 50890351 ACATGGATGTAGCGGACTGGGACAAACACACAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446782 28 + 49145316 ACATAGATGTAGCAGACTGGGACAAACA------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3691642 35 + 145441459 ACATGGATACTGAGGACTGGGGCAAAGACACAAGG i mm10.chr7 I 59 I 24 s canFam3.chr1 19649388 31 - 122678785 ATCTGGATGTTAAGGATCAGGTCAATCGCAC---- i canFam3.chr1 C 0 C 0 a score=230043.000000 s hg38.chr19_GL949753v2_alt 162691 91 + 796479 ACCAGACGCAGAAGGCAGGGGAGAAAGAAAAGCAGATGA--Aggccggatacggtggctcacgcctgtaatcccagcactttggaaggctgag s panTro4.chr19 59095397 91 + 63644993 ACCAGATGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccggatgcggtggctcacgcctgtaatcccagcactttggaaggctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972847 91 + 60714840 ACCAGACACAGAAGGCACGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742384 91 - 106955855 ACCAGACGCAGAAGGCAGGGGAGGAAGAAAAGCAGATGA--Aggccgggcgcggtggctcacgcctgtaatcccagcactttgggtggctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032146 93 + 64156825 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057718 93 + 59248254 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtgtggtggctcacgcccgtaattccagcactttgggaggctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160024 93 + 51301725 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAagaggctgggtacggtggctcacgcccataattccagcactttgggaggctgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864258 93 + 50890351 ACCAGATGCAGAAGGCGGGGGAGGAAGAAAAGCAGATGAAGAggctgggtatggtggctcatgcccgtaattccagcactttgggaggctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45446810 83 + 49145316 --------CAGAAGGCAACGGGGGAAGAGAAACAGATGA--Gggccaggccaagtggctcatgcctgtaatcccagcactttgggaggtgaag i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649419 9 - 122678785 ------------------------------------------------------------------------------------AGGGATGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I a score=261103.000000 s hg38.chr19_GL949753v2_alt 162782 96 + 796479 gtgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaagattagccaggcgtggtgg s panTro4.chr19 59095488 96 + 63644993 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacatggagaaaccccgg----------------------------------------------------------------------------------------ctctattaaaaattcaaaattagccaggcgtggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55972938 96 + 60714840 gcgggcagatcac--aaggtcaggagttcgagatcagcctgaccaacacggagcaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742475 96 - 106955855 gcgggcagatcac--aaggtcacgagttcgagatcagcctgaccaacatggagaaaccccgt----------------------------------------------------------------------------------------ctctactaaaaattcaaaattagccaggcgtggtgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032239 96 + 64156825 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057811 96 + 59248254 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactgaaaatacaaaattagccaggcatggtgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160117 96 + 51301725 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864351 96 + 50890351 gcaggcagatcac--aaggtcaggagttcgaaaccagcctgaccaacatggagaaaccccat----------------------------------------------------------------------------------------ctctactaaaaatacaaaattagccaggcatggtgg i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45446893 186 + 49145316 gcaggcggatcacctgaggtcaggggttcgagacacacctggccaacatggagaaacccagtctctttttttaaaattgtttttattttttaaaCTTTTTACCTGTAATTTACAACCATTTTCTTTTTCTTCTTATTTATTTGCTTCAGCctctactaaaaatataaaattagccaggcgtggtgg i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C a score=122931.000000 s hg38.chr19_GL949753v2_alt 162878 53 + 796479 agcatgcctgtagtcccagctacttgggaggctgaggcaagagaatcgcttga s panTro4.chr19 59095584 53 + 63644993 agcatgcctgtaatcccagctacttgggaggctgaggcaagagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973034 53 + 60714840 cgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742571 53 - 106955855 cgcatgctggtaatcccagctactcgggaggctggggcaagagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032335 53 + 64156825 tgcatgcctgtaatcccagctacgcgagaggctggggcaagagaatcgcttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057907 53 + 59248254 tgcatgcctgtaatcccagctactcgagaggctggggcaagagaatcgcttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160213 53 + 51301725 tgcatgcctgtaatcccagctactcgggaggctggggcaagagaatcgtttga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45447079 53 + 49145316 cgcatgcctgtaatcccagttactcaggaggccgaggcaggagaatcacttaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e canFam3.chr1 19649428 0 - 122678785 C e chlSab2.chr6 46864447 1731 + 50890351 I a score=83384.000000 s hg38.chr19_GL949753v2_alt 162931 39 + 796479 accc-gggaggtggaggttgcagtgagccaagatcgtgcc s panTro4.chr19 59095637 39 + 63644993 accc-gggaggtggaggttgcagtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973087 39 + 60714840 accc-gggaggtggaggttgcagtgagccgagatggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742624 39 - 106955855 accc-gggaggtggaggttgcagtgagccaagatcgcgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032388 39 + 64156825 acct-gggaggtggaggttgcagtgagctgagatcgcacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057960 39 + 59248254 acct-gggaggtggaggttgcagtgagctgagatcgcacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47160266 39 + 51301725 accc-gggaggtggaggttgcagtgagctgagatcgcacc i papAnu2.chr19 C 0 M 776 s calJac3.chr22 45447132 40 + 49145316 acccggggaggtggaggtggcagtgagctgagattgtacc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649428 9 - 122678785 ACCC-AGAAG------------------------------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I a score=121053.000000 s hg38.chr19_GL949753v2_alt 162970 105 + 796479 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaagaaaaacaaacaaACAAACAAACATGAAACAGAGAAATGAGCTGATC s panTro4.chr19 59095676 93 + 63644993 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaaagaaagaaa------------aacaaacaaaCATGAAACAGAGAAATGAGCTGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973126 104 + 60714840 actgaactgcagcctgggcgacaggagcgaaactccatctcaaaaaaaaaagaaagaaagaaaagaaaa--aaATAACAAACATGAAACAAAGAAATGAACTGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742663 95 - 106955855 actgaactgcagcctgggcaacaggagcgaaactccatctc-aaaaagaatgaaagaaaga----------aacaaacaaaCACGAAACAGAGAAATGAGCTGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032427 99 + 64156825 attgaactccagcctgggcaataagagcgaaactccatctcaaaaaagaaagacagaaagaaaa-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55057999 99 + 59248254 attgaactccagcctgggcaataagagcgacactccatctcaaaaaagaaagaaagaaagaaag-------aaaaaaaAAACATGAAACAGAGAAGGGAGCTGATC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447172 86 + 49145316 actgctctccagcctgggcaacaagagtgaatttccgtctcagaaaagaaaagaaga--------------aaCAG------ATGACACAAAGAAACAAACTGGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19649437 54 - 122678785 ------------------------------------------AAAAGGCACGAGAGGAAGAGA--------AACAGACCAA-ACGACACAGTGAGTTCAGA-GATA i canFam3.chr1 C 0 C 0 e mm10.chr7 3691677 24 + 145441459 I e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=176406.000000 s hg38.chr19_GL949753v2_alt 163075 91 + 796479 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc s panTro4.chr19 59095769 91 + 63644993 AACAAG--------AGACAGCTAGAGATGAGGCAGAAGCTGAAAAAGACTCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTCCCCTCCTCTCCCTCTCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973230 91 + 60714840 AACAAA--------AGACAGCCAAAGACGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------CCTCTCCCCTCCTCTCCCTCTCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742758 91 - 106955855 AACAAG--------AGACAGCCAGAGATGAGGCAGAAGCTGAGAAAGACTCAAAGAGGAAACAGGTTGCTTCCC----------cctctcccctcctctccctctcctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032526 99 + 64156825 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058098 99 + 59248254 AACAAGAGACAGCCAGACAGCCAGAGATGAGGCAGAAGCTGAAAAAGACCCAAAGAGGAAACAGGTTGCTTCCT----------CCTCTGCCCTCCTCTCCCTCTCCTC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45447258 101 + 49145316 AACAAG--------AGACAGCCAGAGATGAGGCAGAAACTGAGAAAGACACAGAGAGGAAACAGGTTGCTTCCCTctttcccttcctctcccctcctctccctctcttc i calJac3.chr22 C 0 I 1268 s mm10.chr7 3691701 87 + 145441459 AGCGAC--------ACACAGTAAGAT-TAAAGGAGAAGAAATAGAAGACTCGAAGAGGAAACAGACTGCTGCTT-----------CTCTGCATCCTTCTTCCTTTCT-- i mm10.chr7 I 24 C 0 s canFam3.chr1 19649491 56 - 122678785 AGCAAG--------AGATGTCCAGAGA-----CAGAGGCAGAAAGGGAC----AGA---------------CCT----------CCTCCCCACTCCTC----------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=411743.000000 s hg38.chr19_GL949753v2_alt 163166 128 + 796479 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC s panTro4.chr19 59095860 128 + 63644993 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973321 128 + 60714840 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742849 128 - 106955855 cctcCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGACCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCGGCTGCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032625 128 + 64156825 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058197 128 + 59248254 CCTCCACCAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAACAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i macFas5.chr19 C 0 C 0 s calJac3.chr22 45448627 128 + 49145316 cctccctcAAATTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTCCCGAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCACAGGTGAATAGGGTGAGCCCCAGGCCCACAGCAGCTGCCCC i calJac3.chr22 I 1268 C 0 s mm10.chr7 3691788 127 + 145441459 -CACCACCTAGTTCTCACCAGGGCTGGGCCTGAATGAGGGCCCAGGTTCCCAAGATGGTGATCAGAGAATGCAAACTGTGGGGGCCACAGGTGAATAAGGTGAGCCCCAGGCCCACAGCTGCTGCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19649547 128 - 122678785 CTCCCACCAAATCCTCACCAGGGCTGGGCCTGGATGAGGGCCCAGGTCCCAAGGATGGTGATCAGAGAATGCAAAGTGTGGGGGCCGCAGGTGAACAAGGTGAGCCCCAGGCCCACGGCTGCTGCCCC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46864447 1731 + 50890351 I e papAnu2.chr19 47160305 776 + 51301725 M a score=882135.000000 s hg38.chr19_GL949753v2_alt 163294 269 + 796479 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG s panTro4.chr19 59095988 269 + 63644993 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT---------------------CCCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973449 268 + 60714840 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCAATGGGGATGGAGATAAGAAGAACCACTAGATATGTCCATTCTTCAGGCGACATGGTCTGGGGGAAGGGCAGAGATTCACAGTGAGAACCCAGGaatccaggccccctgcctcctccctctacgaggatccaggaatccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102742977 268 - 106955855 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCCCTGGGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATAGGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCGGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60032753 268 + 64156825 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCTGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55058325 268 + 59248254 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCCAGGATCCAGGAACCCAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46866178 268 + 50890351 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGCATAAGCCTGGAACCTTCCAGAGGGT----------------------CTCCCCCTTTATTTTCCACTGCGGAGGGAGCCTGACTCACCGGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGATTCACAGTGAGAACCCAGGAATCCAGGCCCCCTGCCTCCTCCCTCTTCGAGGATCCAGGAACCCAG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45448755 229 + 49145316 CCATCTCTTCAGCCCAGGACCTGCAGGGGGAAGGGACAGAATAAGCCTGGAACCTTCCAGAGGGT----------------------CCCCCCC-TTATTTTCCACTGGGGAGGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATAAGAAGAACCACTAGATACGTCCATTCTTCAGGAGACATGGTCTGGGGGAGGGGC--AGATTCACTGTGAGAACCCAGGAATCCAGG------------------------------------CAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3691915 233 + 145441459 CCATCTCTTCAGCCCAGGTCCTGAAAGGAAAAGGTAAAGTATAAGCCTAGAACCTTCGGGAGGGGTGATTCCCCACC---CCAGCTCCCTCACCCTAATTTTCCACTAGACAAGGAACCTGACTCACCAGCTTTCTTAAAGAGGAAGCCAACAGGGATGGAGATAAGAAGGACCATTAGATATGTCCATTCTTCGGGTGTCATGGTCTGGGGGAGG---AAGGACTCACAGTGAGAACC--------------------------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19649675 262 - 122678785 CCATCTCTTCAGCCCAGGTCCTGCAAAGAGAAGGGAGAGCATAAGCCTGGAACCTTCCAGGGAGC-----TCCTGCCGGGTTCCCCCCCCCTCCCCCAGTTTCCACTAGGGAGGGAACCTAACTCACCAGCTTTCTTAAAGAGGAAGCCGATGGGGATGGAGATGAGAAGCACCACTAGATAAGTCCATTCTTCAGGCGACATGGTCTGGGGGAGGGGCAGAGGTTCCTAGTGAGGCCC-----------------------CTCCCCCCTGGAGGGTTCAGGAACCCAC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47160305 776 + 51301725 M a score=1690470.000000 s hg38.chr19_GL949753v2_alt 163563 542 + 796479 --CCTTCTAGACCCCAGTTTTTGAGGATGATGGAGTATGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTCT------TCGAGACCACCCAGAGGAGCCC-GGGTCTCCAACCT-GCACCTCCT----TCGGAGCTCCACACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC s panTro4.chr19 59096257 542 + 63644993 --CCTTCTAGACCCCAGTTTTTGA---TGATGGAGTCTGAGCCTCAGCTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCC--CTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTGCCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAAGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACGGCACCCCTCCCGG-ACCGTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGCCCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCCCTTGTGAAACCAGATATCCGGACC-ACCCAGCCCTTCT---CCTTCGAGACCACCCAGAGGAGCCC-GGGCCTCCAACCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55973717 545 + 60714840 --ccctctagaccccagtttttgaggatgatggagtccgagcctcagctcctctcctttgagaacctagcaacacaga-ctccagccccttcctccttggaggagacaggaatcca-cccccagccc--ctcctTT--GAGAGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACGCATACTACGGACCCAGATTTGAAGACGCCTCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ATCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGA-CCCCCTCTTCCAC---CGAGGATCCAGGAACCCAGACCACCTCTTTGGATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATCCGGACC--CCCAGCCCTTCTTCTCCTTCGAGACCACTCAGAGGATCCC-GGGCCTCCAGCCT-GCACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCAGGGATCGAACACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743245 548 - 106955855 --CCCTCTAGACCCCAGTTTTTGAGGATGTTGAAGTCTGAGCCTCAGTTCCTCTCCTTTGAGAACCTAGCAACCCGGA-CTCCAGCCCCTTCCTCCTTGGAGGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTTT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTGGAGAACCCAGGAAAGTGTGGGGATCTCCCAG--CACCCAGGCCCCTCCTTTGCGAACGCAGAAATCAAAGCTACTCCCCGCACCCATACTGGGGACCCACATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCGG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACTTCCGAGCCCCCTCTTCCAG---AGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--TCCCCGGCCCTTGTGAAACCAGATATCCGGACCCCCCCAGCCTTTCT---CCTCCGAGACCACCCAGAGGAGCCT-GGGCCTCCAGCTT-GCGCCTCCT----TCGGAGCTCCAGACCCCTCTCCTACTGAGAACCCGGGGATCGAACACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033021 543 + 64156825 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i rheMac3.chr19 C 0 M 287 s macFas5.chr19 55058593 543 + 59248254 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGagtccgagactcagctcctctcctttgagaacctaggaacccgga-ctccagccccttcctcctt---ggagacaggaatcca-cccccagcccctcTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAATCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCAGCCCTTGTGAAACCAGATATCCGGACC-CCCCAGCCCTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-GGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGAGGATCGGACACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161081 543 + 51301725 --CCCTCTAGACCCCAGTTTCTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAGGAACCCGGA-CTCCAGCCCCTTCCTCCTT---GGAGACAAGaatcca-cccccagcccctctcctAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCCTTTGCGAAGGCAGAAATCAAAGTTACTCCCTGCACCCATACTAGGGACCCAGATTTGAAGACGCCCCTCTTTTTAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAAcccagaccccctctttggatcccccat--cccccagcccttgtgaaaccagatatccggacc-ccccagcccTTGT---CCTTCGCGAGCACTCAGAGGAGCCC-Gggcctccagcct--cacctcct----tcGGCGCTCCAGACCCCTCTCCTACAGAGAACCCGGGGATCGGACACCC i papAnu2.chr19 M 776 C 0 s chlSab2.chr6 46866446 529 + 50890351 --CCCTCTAGACCCCAGTTTTTGAGGATGATGGAGTCCGAGACTCAGCTCCTCTCCTTTGAGAACCTAG---------------GCCCCTTCTTCCTT---GGAGACAGGAATCCA-CCCCCAGCCCCTCTCCTAT--GAGCGCACAGGCCTCCAGCTCTCCTCTCCTTTGAGAACCCAGGAAAGCGTGGGGATCTCCCAG--CACCCAGGCGCCTCGTTTGCGAAGGCAGAAATCAAAGTTACTCGCTGCACCCATACTGGGGACCCAGATTTGAAGACGCCCCTCTTTTAAAAACCCAGAAACAGCACCCCTCCCAG-ACCCTTCCTCTTCGACAGCCCAGGAATCTAGACCTCCGAGACCCCTCTTCCAG---CGAGGATCCAGGAACCCAGACCCCCTCTTTGGATCCCCCAT--CCCCCGGCTCTTGTGAAACCAGGTATCCGGA-C-CCCCAGCCCTTCT---CCTTCGCGAGCACCCAGAGGAGCCCGGGGCCTCCAGCCT--CACCTCCT----TCGGAGCTCCAGACCCCTCTCCTACGGAGAACCCGGGGATCGGACACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45448984 532 + 49145316 --CCCTCTGGACCCCAGTTTTTTAGGATTCCggagtccgagtctcag------------gagaacctaggaaccggga-ctccagctccttcctccttggaggagacaggaag--a-caggagactcctctcctttcagagtgcacagggctccAGCCCTCCT--CCTTTGAGAACGCAGGAAAGCGTGGGGCTCTCCCAG--CACCCAGGCCCCACCTTTTCAAATGCAGAAATCAAAGCTACTCCCTGCACCCATGCTGAAGACCCAGATTTGAAGACGCCCCTCCTTAAAAAACCCAGAAGCAGCACCCctcccgg-acccctcctctttgagagcccaggagtctagacgtccaagccccctcttccag---cgaggatccaggagcccagacccccTCTTTGCATCCCCCAT---CCCCGGCCCTTGTGAAACCAGATATTCGTAAC-CCCGAGCCCTTCT---CCTTCGAGAGCACCCAGAGGAGCCC-GGGGCTCCAGCCT-CCAACCTCT----TTGGCGCTCCAGACCCCTCTCCTATTGAGAATTCGGGGATCGGAGCCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692148 402 + 145441459 --------------------------------------------------------------------------AGTA-TTCCAGTCCCTTCCTCTTTTGAAGACAGTAGAAT----------------CCCCTTT--GAGAACCCAGGCCTCCAGCTCACTCCTCCTTCCAGGACCCAAGAA-------------TTAAG--CCCCCACCCCACCCCTTTGCCAATGTTGAAATCAAAAGTACTTC---TACTTCCATTTATGACCCACA-----------CCTTCC-------GGCCAGAAAAACAATCCTTCACAACACCCCTCTTCTCTGAGAGCCCAGGAATCTGTATCATCCTCACCCTCCT---------GAGTACATTGGAGCCC---------TTCTGGGTCCCCAATTTCCTCTGCGTCTTACAGGACCCAGTACTCCCACT-CCC--GCCCAGCT-----------------CGGAGAAGCCC--AGCATTTAGCATCCTGTTTTCTAAGCTCTGAGCTCTGGGCTCCTCTTTAACCCGTACCTCGGAGAGAAGGCAATG i mm10.chr7 C 0 C 0 s canFam3.chr1 19649937 470 - 122678785 TCCCCCGTAGTTCCCAGTTG-TGAGGGTCCTGGAGTCCTACCCTCAGCTCCTCTCCTCTGAGAACACGGAAATCTGTACCTCTAGAACCTTCCTCCTTCGAGGTTAAAGAAATCTACCCCCCAGCTCCGCTTTTCT--GAGAACCCGGGCCACCAGTCCTCTTCCCCTGTGAGAAC-CAGGAA-------------CCCAGACCTCTCAGGCCCTCTCTCTGCGATCCCAGAAATCAAAGCAACTCCCCCCGCCCCCACTGAGGTCCCAGGGATTGAGATATCGCTCT---GAGAACCCAGCAACAACCCTTGTCCCAG-GCCCTTCC-CTTGGAGAGCGCAGGATTCCAGATCTCCCGGCCTCCTCCTCCTCCTTCGAGGACCCAGCGACTCAACCCTCCC-------TCTCCGAT-----------------AACCCAGGT--------T-------------T-----------------------------CAGCCTCCAGCCT-CCACCTCCT----CCGGAGCTGCAGACCCTTCTCCCACCTGAAGCCCGGAGGACGGTCCACC i canFam3.chr1 C 0 C 0 a score=893877.000000 s hg38.chr19_GL949753v2_alt 164105 324 + 796479 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCCGGGCTG s panTro4.chr19 59096799 324 + 63644993 TCCCCT-ccccaggcccaggc-ccaggcccagccccaacccGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAACGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTTGCCGCCGCAGCTCCGGCCACGCCTcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974262 318 + 60714840 TCCCCT-------GCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGTTCCAAAGCGCCTCCGGGGCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCTggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgccTGCTCCTTCTGGGCGC----CCGCCGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102743793 324 - 106955855 TCCCCT-CCCCAGGCCCAGGC-CCAGGCCCAGCCCCAACCCGTCCCGCGCACCCCAGCGC------------ATCCCCGGCAGAGCCACAGGCGGTTGCGCCAGCCCCGAGCTCCAACGCGCCGCCGGGCCCG-C-CCCGCACCCGCCAGCCCGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTCGCCACTGGGCGCCGCCACCCTGGCCCACCTGA------------GCTGCTCGCCGGGCAGTAGGCGGCCGAGCAGTCCCAGCCCGCTGGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGCGCGC----CCCCGCGCCTCCTGCTCCTTCTGGACGC----CCGCCGGGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55059136 330 + 59248254 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCCCGCGCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161624 330 + 51301725 TTccct-------ccccaggc-ccaggcccagccccaACCCGTCCCGCGCACCCCAGCGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCAGTCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTcccagcccgcgggccgccgcggctccggccacgcctcccccgcccagcgcgc----ccccgcgccgcctgctccttctgggcgc----ccgctgggccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46866975 330 + 50890351 TTCCCT-------Ccccaggc-ccaggcccagccccaacccgtcccgcgcaccccagcGTGGGTCGGATCCAATCCCCGGCAGATCCACAGGCGGTTGCGCCAGCCCCGAGCTCTAACGCGCCTCCGGGGCCG-C-CCCGCACCCACCAGCCTGCAGAGACCCTGCCGCCGTGTAA-CCTCGCCTTGCCACTGGGCGCCGCCACCCCGGCCCACCTGA------------GCTGCTCGCCGGGCAGGAGGCGGCCGAGCAGTCCCAGCCCGCGGGCCGCTGCGGCTCCGGCCACGCCTCCCACGCCCAGCGCGC----CCCCGCGCCGCCTGCTCCTTCTGGGCGC----CCGCTGGGCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449516 324 + 49145316 TCCTTT-------CCCCAGGC-CCAGGCCCAG------CATGTCCCGCGCACGCCAGCGTGGGTCGGATCCCACTCCCGACAGAGCTACAGGAGGTTGCGCCAGCCCCGAACTCCAGCGCGCC-CCGGAGCCG-C-CCCGCACCCGCCAGTCCGTAGCTACCCCGCCACCGCGTGACCCCCGCCTTGCCATTGGGGGCCGCCACCCCGGCCCACCTGA------------GCCGCCCGCCGGGAAGGAGGCGGCCGAGCAGTCCCAGCCCGCGAGCCGCCGCGGCTCCGGCCACGCCTCCCCCGCCCAGTGCGC----CCCCGCGCCGCCTGCTCCTTCGGGGCGC----CCGCCGAGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3692550 312 + 145441459 -ACCCTGTACGATCTGCAAGCACCTTTCGTAGCCCAGCCCCGCGCAGCGAAGGCCAGCGTGTATCCGATTC-TGCCTCGGCAGATCCACAGGCGGTTACGCCA---CCCAGCCCGGCCACGCTCTGGGCGCTGTC-CCCGC------------------ACCCCGCCACCCTACGATCTTCGTGACGCCGCCATGCAACCCAACCTGGGCCCACCTGA------------ACCGTCCGTGGGCCAGAAGACTGCGGAGC---TCCTTTTCG-AGGCCGCCTCGGCTCGCGCCACGCCTCCCCAGCTCAGCACGC----CCCCGCACTGCCCG-TTCTGGAGGGCGC----CGGCAGGGCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19650407 299 - 122678785 ----------------------------CCAGCGCC--CCAGTTCC-----CCCCGGCGCAAGTCAGA----CCTCCCGGCAGAGCCACAGGCGGTTAcgcca-ccccgcgctccgccgcgctctcggcgcca-cacccgcccgggccggcccgccgg---tccgcaagcgc-----ccccgcctcgcccccgaggcgccccgctccggcccacctgggcccggctccgcgctgcccGCCGGGCAGAAGGCGGCGGAGCAGTCCCGGCCCACCGG-CGCCCCGGATCCGGCCACGCCTCCCTcgcccggcgcgcgcggtcccgggccg------------gtgcgcggcTCCGTCAGGCTG i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60033564 287 + 64156825 M a score=1680104.000000 s hg38.chr19_GL949753v2_alt 164429 511 + 796479 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTCTGGAGCTCGCCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAgtt-ctccggaagcggggccacaaacttcggctcacttcggcaatagtcga--------------gaacgga---------------gagctgaggccagtgtgggcggagccacatgtttcggctttcttcggaggtagtCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA s panTro4.chr19 59097123 512 + 63644993 CGCAGATCAGGCCGGGGAAGAAGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGAAGCCGA-GAGCGCGAGTCGGCAACGGGATTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGCTCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCC-TTCGGGTTCCTTCGGGAACAATCGGGAGCTTGAGTTTCCCCGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGCAATAGTCGA--------------GAACGGA---------------GAGCTGAGGCCACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55974580 511 + 60714840 CGCGGATCAGGCCGGCGAAGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCCGGAGCAGGAGCCAA-GAGCGCGAGTCGGCAACGGGACTCGAGTCCAGGTCC----------ACACTGGGATCCGAGCTCCGAGTACGTGAAGGGGCAGGCCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTCGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTTTGGAGCTCGGCGGGAGGAATGAGGCGGAGTCTCCC-TTCGGGTTCCTTCTGGCACAATCGAGAGCTTGAATT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCTAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTGGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGACAGTTGGGTACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744117 511 - 106955855 CGCGGATCAGGCCCGGGAAGAGGTCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCGGAGCAGGCGCCGA-GAGCGCGAATCGGCAACGGGACTTGAGTCCAGGTCC----------ACACTGTGATCCGAGCTCCGAGTACGTGAAGGGGCGGGCCTTCGGGCTCGGAACAGGGAGGAGCCAAAAGCTTTGGACCCGAAGGGGAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGAATGAGGCGGGGTCTCCT-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACTGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------AAGCTGGGGCCAGTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGGGTCACTGTTCCGATGTGGGCGGGGCCACAGACT-CGGCCGGATGTCGGTGGGGCCACAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60033851 511 + 64156825 CGCGGATCAGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACAGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i rheMac3.chr19 M 287 C 0 s macFas5.chr19 55059466 511 + 59248254 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACTG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGAACGTGAAGGGGCAGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGCGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGCCGGATGTGGGTGGGGCCATATGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47161954 511 + 51301725 cgcgGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAGCCCCAGAGCAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCAGAGAACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAGACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGATCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCACAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGAGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGACCACAGACT-CGGccggatgtgggtggggccataAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867305 511 + 50890351 CGCGGATCGGGGCGGGGATGAGGCCACGGTCAGGGTCCCGGGCGGGCAGGGAAGGAACCCCAGAACAGGCGACCG-GAGCGCGAGTCGACAACGGGACTCGAGTCCAGGTCC----------ACACCGGGCTCCGAGCCCCGAGTACGTGAAGGGGCGGGGCTTCGGGCTCGGAACAAGGAGGAGCCAAAAGCTTTGGACCCGAAGGGAAACAGACGGGATCCGGAAAGGAGGCGGGGTCTGGAGCTCGGCGTGAGGGATGAGGTGCGGTCTCCG-TTCGGGTTCCTTCGGGCACAATCGGGAGCTTGAGTT-CACGGGAGGCGGGGCCAGAAACTTCGGCTCACTTCGGAGATAGTCGA--------------GAACGGA---------------GCGCTGGGGCTACTGTGGGCGGGGCCACATGTTTCGGCTTTCTTCGGAGATAGTCGAGTCCTTAGTGTCACTGTTCCGATGTGGGCGGGAACACAGACT-CGGCCGGATGTGGGTGGGGCCATAAGCTTCGGTTTACTTCGTAGATAGTTGGGTACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45449840 506 + 49145316 CGCGGATCGGGCCGGGGATGAGGCCACGGTCAGGGCCCCGGGCGGGCAGGGAAGAAGCCCGGGAGCGGGCGCCAG-GAGCGCGAGCCAGCAGCGGCACTCGAGTCCAGGTCT----------GCAATGGGCTCCGAGTTCCGAGTACGTGAAGGGGCGGGGCCTCGGGCTCGGAACAAGGAGGAGCCAAAAGCCTTGGGCCCGGGGAGGATAAGACAGGATCCGGAAAAGAGGCGGGGTCTGGAGCCTAGCGTGAGAGATGAGGCGGGGTCTCCG-TTCGGGTTCCTTCGGGCACAGTCGGGAGCTTGAGTT-CACTGGAGGTGGGGCCACAAACTTCCGCTCACTTCGGAGATAGTCGA--------------GAACCGA---------------GTGCTGGGGCCGGCGTGGGCGGGGCCACACGTTTCGGCTTTCTTCGGAGATAGTCGAGTC---AGGGTCGCTGTTCTGATGTGGGCGGGACCAC--ACT-CGGCCGGATGTGGGTGGGGCTACAAGTTTCGGTTTACTTCGTAGATAGTTGGGTATAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3692862 508 + 145441459 CGCGGTCCAGGCCCCGAGAGCCGCGGCTGTACGAGTTACAGCACCGCAAGAAAGGTACCC--------------A-GAACACCAGTCTGCCGCAAGATGCCTGTCGCGATCTTTCTAGGAGGTCCCCGGGCAAAGAGCTGCCAGTACGTGAAGGGGCGGGGTTTCGGG-TCAGA--GAGGCGGGGCCAAGATCTTCGAGTCC----------CGTTGAGACTTG---AGGAGGAGGGACCTGGAGCTCA-----------GAGACAGACTTTCAGCTTCGGATTCCTTCGGGCACACTCGGTCATTCAAGCC-CTCGGCATGGAGTGCCAC-AGCTTCGGCTTACTTCGGGGATAGCCGAATTCCAAAGTCACGGCTCGGAATTAGATGCGTTTACAAACTCGGCCGGATGTAGGCGGGACCACACACTTCGGCTTGATTCGGAAATAATCGGGTCCA-AAAGTCGTTGTGTAGTGTTAGGCGGGCTCAAGAACG-CAGAACGAAGTAGGCGGGACCGCATGCTTCGGCTTACTTCGGAGATAGTCGGAATCAG i mm10.chr7 C 0 I 244 s canFam3.chr1 19650706 293 - 122678785 -------------------------------------CGGGCCAGGCAGGGAAG-CGTCCTGCTCCGCGCGCCCGCGAGCACCCCTCGGCCGCTGCA-------CCTGGACC----------TCAC-GGCAGCCGAGCCCAGAGCACGTAAAGAGGCGAGGCCTCGG---------------------------------------------------------------------------------------AGGAAGGAGGCGGGGCCTCCGCTTCGGGTTCCCTCGGGCAGAATCGGCGGC---AGCT----TGGAGGCGGGGCCACAGGCTTCGGTGTACTTCG---------GA--------------------A---------------------------------------------------------------------------------GTCTCTGTTCGGATGTAGGCGGGGCCAAGAGCTGCGGGCGGACGTAGGCGGGGTCATA-GCGTCGGTTTTTTCCGGAGATGGTTGGGTACCA i canFam3.chr1 C 0 C 0 a score=608434.000000 s hg38.chr19_GL949753v2_alt 164940 200 + 796479 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCCATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTACGGGACCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG s panTro4.chr19 59097635 200 + 63644993 GTGTCGC----TAGGGTGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCTGCGTGAGCCTACGGGACCGGGCCAGGGTGAAGATCCTCAAGTTCCCAAGTAGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975091 200 + 60714840 GTGACGC----TAGGATGATAGACGGAGTCAACAGGATCGCCAGATACCGATGAGTATTTACA------------AGGGGGCGGGGCGG--AAGCGACTTGCCCTCAAAGGGGGGGAACCCCGAGGGCCGGCGTGTGCCTACGGGATCGGGCCAGGGTGACGATCCTCAAGTTCCCAAGTTGAAGAGAGGAAGCGGCAGAGGGAGGTGCGCTCAGTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102744628 200 - 106955855 GCGACGC----TGGGGTGATAGGCGGAGTCAACAGGTTCGCCAGAGACCGATGAGTATTTACA------------AGGGGGCGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGTCTACGGGACCCGGCCAGGGTGAGGATCCTTAGGTTCCCAAGTTGAGGAGAGGAAGCGGCAGAGAGAGGTGCGCTTAGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034362 200 + 64156825 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55059977 200 + 59248254 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCGAGATGCTGATAAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGCACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162465 200 + 51301725 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46867816 200 + 50890351 GGGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGCCAGATACCGATGAGGATTTACA------------AGGGGGCGGGGCGA--AAGCGGCTTGCCCTCAAAGGGGCGGAACCCCGAGGGCCGGCGTGCGCCTAGGGGACGGGGCCAGGGTGACGAGCCTCAAGTTCCCAAGCTGAGGAGAGGAAGCGGCAGAGGGAGGTGCGCTCGGTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450346 189 + 49145316 GTGACGC----TAGGATGATAGGCGGAGTCAACAGGTTCGGCAGATACGGAAGAATATTTACA------------AAGTGGAGGGGCGA--AAGCGACTTGCCCTCAAAGGGGCGGAACCCCGGAGATCGGCGTGCGCGTAGGGGGCGGGGTCAGGGAGACGATCCTCAAATTCCGGAGT-----------AGCGGCAGAGGGAGGTGCGCTCGATGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19650999 206 - 122678785 GTGGCTCAGATTAGGA-GATAGGCGGAGTCTGTTTTTTCCTGAG-----GAGGCGGGGCCACAGACAGGGCTCGGAGGGGGCGGGGCCAACAGGAGCCCAGCCC---GAGGGGCGG-CCCCCGTTGACC--CGTCAGCCGCGGGGGCGGGGCCAGGGTAATTAGCCTCCCACACGCGAGAGGCAGAACCGTAGAGGCGGAGGGAGGTTCGCTTCGCGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3693370 244 + 145441459 I a score=1685709.000000 s hg38.chr19_GL949753v2_alt 165140 496 + 796479 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGCAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGTCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCCGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC s panTro4.chr19 59097835 496 + 63644993 -GGCGGAGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGCAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCACCTCGACTGCGAATTACTGTT---TATGAGGTGACTTGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGGAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TAGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGAAGGGGGCGGGGCCACAGGCTGCGAGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTATGGCGTCCGGGAGGAGGCGGGGCTGCGGATTCGGCCGAGCCGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55975291 497 + 60714840 -GGCGGGGCCAAGG---TGGCCCCCGCGG--------GAGGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGGCGCTGATGGGGCGGGATGACGAAGTTGACG-A-GGGTGTCAGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTGTATCGGTGGACAGTGGGACTTTCTGTATGGAGGCAAGGAGGCGGACTGACCGCTCTCAATTGGGGTGAGCCCGCCCGATCTGATAGTGGACCGCGGGTGCCTAGGGGGCGGGGCTTTCGGCTGTGGGGTTCGGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGGCTGCGAGACTGCTGGTGAGCCGATGACGCCCGAACGCCGAACCTATTGCGTCCGGGAGGAGGCGGGGCTACGGACTCGGCCGAGCCGAGAAC i ponAbe2.chr19 C 0 M 678 s nomLeu3.chr10 102744828 492 - 106955855 -GGCGGGGCCAAGG---TGGCCCCCGCG-----------GGAGGGCGGGGCTTCGGTCCTGCGAGGGGCGGGACCTGAC-TTCCCGCGTCGCTGATGGGGCTGGATGACGAAGTTGACG-A-GGGTGTCGGCATGAGG------GGGTGGAGGAAGGAGCGCGTG--GTGCGGTGCATAGTGGGTGGCTCCGCCTCGACTGCGAATTACTGTT---TATGAGGTGACTCGCTGGTTCTATCGGTGGACAGTGGGACATTCTGAAGGAAGGCAAGGAGGCGGACTGAGCGCTCCCAATTGGGGTGAGCCCGCCGGGGCGGAGAGTGGACGGCGGGTGCCCAGGGGGTGGGGCTTTC-GCTGTGGGGTTCAGTCG-TCGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCGCTCAGAGGGGGCGGGGCAACAGGCTGCGAGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTAGTGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60034562 496 + 64156825 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060177 496 + 59248254 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTCGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGCGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47162665 496 + 51301725 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GAGGAGGGCGGGGCTTCGAGCCCGCGAGGGGCGGGTCCTGAC-TCCCCCCGGCGCTGACGGGGCGGGATGACGAAGTTGACG-A-GAGGGTAGGCAAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAGGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCAGGCGGGAACTCCCCATCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGGCTGCCGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGCAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868016 496 + 50890351 -GGCGGGGCCAAGG---TGGTCACCGCGG--------GGGGAGGGCGGGGCTTCGAGCCTGCGAGGGGCGGGTCCTGAC-TTCCCCCGGCGCTGACGGGGCGGGGTGACGAAGTTGACG-C-GAGGGTCGGCCAGAGC------GGGTGGAGGAAGGAGCGCGTG--GCGCGGTGCGTAGTGGGTGGCTCCGCCTCGACTGCGAGTTAGTGTT---TATGAGGTGACTCGCTGGTTCTGTCGGTGGACCGTGGGACATTGTGAAGGGAAGCAAGGAGGCGGACTGAGCGCTCCCAAGTGGGGTGAGCCCGCCCGAGCGGAGAGTGGACGGCGGGTGCCCAAGGGGCGGGGCTTTCGGCTATGGGGTTCGGTCG-TCGGGCGGGAACTCCCCGTCGGGGGTGCGCTGGCGCTCGGAGGGGGCGGGGCCACAGCCTGCGGGACTGCTGG-GAGCCGATGACGCCCGAACGCCGAACCTCAGGCGTCCGGGAGGAGGCGGGGCTACGGATTCGGCCGAGCCGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45450535 505 + 49145316 -GGGGGTGCCAAGG---TGGCCACCGCGG--------GAAGAAGGCGGGGCTCCAGGCCTGTGAGGGGAGGGTCCTGAC-TTCCCGCGGCGCCGAGGCGGCGGAATGACGAAATTGACG-CTGGGGGTCGACATGGGGAGGGGAGGGTGGAGGAAGCAGAGCGTGGCGCGCGGTGCGTAGTGGGTGGCTCCGCCTTGACTGCGAGTTGGTGGTA--TCTGAGGTGACTCGGTGATTCTATCCGTGGACCGTGGGACATTCTGAAGGGAAGCAAGGAAGCGGACTGAGCGCTCCTAAGTGGGGTGAGCCTGCCCGAGCGGAGAGTGGATGGCGGGTGGCCAGGGGGCGGGGCTTTCGGCTACGGGGTTCGGTCG-TGGGGCGGGAACTCCCCAACTGGGGTGCGCTGGCTCTTGGAGTGGGAGGGGCCACAGGCTGCGGGACTGCCAG-AAGCCGATGACG-CAGAACGCCGAACCTTGTGCGTCCGGGAGTGGGCGGGGCTACGTAGTCGGCCGAGCCGAGAAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3693614 384 + 145441459 -GGCGAGGCCAGAGCAATGACCCTCAAGGTCCCATTTGTGCAGACCGGAGT-----GGCAGTGAGGGCT--TTCTTGGCTTTTCCGCTTTGCTGACCTGACGGGATGACG--------G-A-----------------------GG---------------------ACGCGCTACGTAG-GGCCAGCTCCGCCTTAGCCGAGAGTTGGTGTTGGCTAGGGGTTGACTTATTGCCTCTGCCTGAGGACAGTACGACAGATTGAAAGGGAGCCACGACGCACACTGCAC----------------------CTCGAGTG------------------------------------CGACTGT-GGATTCAATCG-T-AATTGTGAACTCCTTAAATTGGGTAGG----------AAGTGGGCGGGGCCACAG-CTGGAAGAACGATGG-GATCTGGCTAGGGTCGAATGCTGAACCTTTTGCAACTTAGAGGGGGTGG-----CTGATTCTACTGAGCCGAGATC i mm10.chr7 I 244 I 32 s canFam3.chr1 19651205 467 - 122678785 GGGCGGGGCCAGGT---TGTTCCCCTTCG--------CGGGAAGGCGGGGCTACGGTGCCGCTGGGGCGGATCCCAGAC-TTCCCGCTCGGCTGAGGTGGCGGCGTGACGAGATTGACGCA-GGGGGTCGGGATGGGGAG----GGGTGGAGGAAGCTGCGCGTG--GCGCGCTACGTAGGGGGCGGCTCCGCCGGGGCTGCGAGCGGGTGTT---TACGAGGCGACTAACTCGTTCTATCGGAGGACGGTACCGCATTCTGAGGGGAA------------------CGCTCACGAG-GAGGTGAGCCCGCCCGGGCAGCGAACGGACGGCGGGTGCCCCGGGGGAGGGACCTCCGGCTGC-GGGTTCGCTCACTAGGGCGGGGACTCTCCCGCCGGGA-GCGCCTGCGGCCGGAGCGGGCGGGGC--CCGGCTGCTGGTC-GACGG-GAGCCGAGGGAGCCCGAACGCCG--------GCCTTCGGGAGGGGGCGGGGCTGCGAGTTCGGCCGACCCGGGA-- i canFam3.chr1 C 0 C 0 a score=509117.000000 s hg38.chr19_GL949753v2_alt 165636 210 + 796479 ACCCGAACGTCAAATTGCTGGCGTTCGGGAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCTCGAGCGTCCGGAAGAGGGTGTGGCC s panTro4.chr19 59098331 210 + 63644993 ACCCGAACGTCAAATTGCTGGCGTTCGAAAAGGGGGCGGGGCTGCGGATTCGGTGGAGCCGAGGACGCCCGAATGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGGAGGTCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGAGCGAAGGCCCGAGCGTCCGGAAGAGGGTGTGGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745320 210 - 106955855 TCCCGAATGTCAAATTGCTCACGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCGAGGACGCCCGAACGCCGAACTTCCTGTGCTCGGGAGGGGGCAGGGTTTTGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGAAAGCCGAATCACAGTCGTTCGGAAAGAGGAGGACCGAAGGCCCGAGCGTCCCGAAGAGGGTGTGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035058 210 + 64156825 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060673 210 + 59248254 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCAATTCTTGTGCTCTGAAGGGGGCAGGGTTTTGTACTGTTGGAGTCTGAGCGCTTGTAGACCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163161 209 + 51301725 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGGGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGATCGCCGCACTTCTTGTTCGA-GAAGGGGGCAGGGTTTTGTGCTGTGGGAGTCTGAGAGCTTGTAGGCCCGAAAGCCGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868512 210 + 50890351 ACCCGAACGCCAAATTGCTCGCGTTCGAGAAGGGAGCGGGGCTGCGGATTCGGTGAAGCCAAGGACGCCCGACCGCCGCACTTCTTGTGCTCGGAAGGGGGCAGGGTTTTGTACTGTGGGGGTCTGAGAGCTTGTAGGCCGGAAAGCAGAATCACAGTGGTTCGGAAAGAGGAGGAGCCAAGGCCGGAGCGTCCCGAAGTGGGTGTGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451040 210 + 49145316 ACCCGAACGCCAAATGGCTCACGTTCGAGAAGGGGGCGGGGCGGTGTATTCGGTGGAGTCGAGGACTCCCGAACGCCGAACCTCCCGCTCCAAGGAGGGAGCAGGGTTTCGTACTGTGGGAGTCTGAGAGCGAGTAGGCCCGACAGCCGAATCACAGTGGTTCGGAAACAGGAGGAGCTAAGGCCGGAGCGTCCCGAAGAGGGTGTGGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694030 200 + 145441459 TTCCGAAGGCTGAAACGCTTGCGTTCGGGTAG---GCAGGACTCCCGATTGAGCCGAATTTAGGATGCTGGAACATCGAACAGCTGGCGC--AAGACAGGACTGGGTTT----CTTTTAAAGTCCGACTCAGAATAGGCGGGAAAGGCGAATCTGGGCACTTC-GAAAGGGGAGGGGCTGGGCTCCAAGTATTTAGAAGAGGGTGTGGCT i mm10.chr7 I 32 C 0 s canFam3.chr1 19651672 115 - 122678785 --------------------------------GGGGCGGGGCT------------------------------------------TGTGCT---------GTGGGGTCCCACCCCGCGAGAG------------GAGGGCCTGAGGCCGCGCCTCGTCGGTTCGGAAAGGGGAGGGGCCGAGTTCCGAGGCGCTGGAAGGGGGCGTGGCC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=262305.000000 s hg38.chr19_GL949753v2_alt 165846 113 + 796479 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG s panTro4.chr19 59098541 113 + 63644993 TCGGCGG--TGCCTTAGCCTCCAGAGCTTCTGACCGCTGACGGGAACACCCGAAGGGTGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGTCCTTTGTAAGGGGGCGTGTCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745530 113 - 106955855 TCGGCGG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGACGGGAACACCCGAAGGGGGACGCCCACTTTGC-AAGAGAGTGGTGCCAAAATGCACCTTTGTAAGGGGGCGTGTCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035268 113 + 64156825 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060883 113 + 59248254 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGAGGGGGGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163370 113 + 51301725 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACCTTTGTAAGGGGGCGTGTCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868722 113 + 50890351 TTGGCAG--TGCCTTAGCCTCGAGAGCTTCTGACCCCTGATGGAAGCACCCGAAGGGGGACGCCCACTTTGC-AAGAGGGTGGTGCCAAAATGGACTTTTGTAAGGGGGCGTGTCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451250 99 + 49145316 TCGGCGG--TGCTTTAGCTTCGAGAGCTTTTGATCCCCGACGGGA--------------ACGCCCACTTTGC-AAGAGGGTGGAGCCAAAATGGACCTTTATAAGGGGGTGATTCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694230 100 + 145441459 TGAGCAAACCACCCTACATT---GAGGTTCTGAGATTTGACGGACGCATAAGAAG----ACACCCACTTTGCAAAAAGGGCGGTGC--------ACCACTATGGCGGGAGGTCTC- i mm10.chr7 C 0 C 0 e canFam3.chr1 19651787 0 - 122678785 C e ponAbe2.chr19 55975788 678 + 60714840 M a score=279580.000000 s hg38.chr19_GL949753v2_alt 165959 140 + 796479 CCGCGCTTGCGGAGGTTTGTTTTTCACGCTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGGGACCCTGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG s panTro4.chr19 59098654 140 + 63644993 CCGCGCTTGCGGAGGTTTGTTTTTCACACTCCAAGGCGCAATGGTAGG-TACGGCAGTGCGGGCACAGAGCGGGTGCCGACCGCAGGGTCACAAGGGTAGAGCGAGGTCCCGGGGGCTTGGCGAGGGGCGAGGGTCGGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745643 139 - 106955855 CCGCGCTTGCGGAGGTTTGTTTTTCAGACTCCAAGGCGCAATGGTAGG--ACGGCAGTGTGGGCACAGAGCGGGTGCCGACCGCAGGGACACAAGGGTAGAGCGGGGCCCCGGGGACTTGGCAAGGGGCGAGGGCCGGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035381 133 + 64156825 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCCCGGGGACGCGGCGAGGGGCGAGGG------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55060996 133 + 59248254 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGGGCCccgggggcgcggcgaggggcgaggg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163483 131 + 51301725 CCGCGCTTGGGgaggtttgtttttgagactccAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAgggccccgggggcgcggcgaggggcgag--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868835 140 + 50890351 CCGCGCTTGGGGAGGTTTGTTTTTGAGACTCCAAGGCGCAATGGTAGG-TACGGCAGTGTGGGCACAAAGCGGGTGCCGACTGCAGGGTCACAAGGGTAGAGCAGAGCCCCGGGGGCGCGGCGAGGGGCGAGGGCCGCGGG i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45451349 106 + 49145316 CCGCGCTTGT---GGTTTCTTTTTGAGACTTGAAGGCGCAATAGCAGG-TAGGGCAGTGTGGGCACAGAGCGGGTGCCGACGGCAGGGTCACAAGGGCTGAGCGGGGCTC------------------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694330 97 + 145441459 ---------------------TCTGAGGGGACGAGAGATGGTGGTACGCTTTGGCAGAGAAGATGGTCACCTGGAGCTGA---------------GGGGGAGCGGAACGGTGGGACCTGGGTGAGGGGCGTGG-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651787 86 - 122678785 CCGCGCTAGGGGA------------------------GCAGAGGACCG-----------------------GGACGCGGACTGCAGGGTCCGGAGGGCCGAGCTGGGCCCCAACGTCTCGGCGAGAGGCGGGG-------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=-13340.000000 s hg38.chr19_GL949753v2_alt 166099 17 + 796479 CTTGTCTCCGG-CGTCTC s panTro4.chr19 59098794 3 + 63644993 TTT--------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745782 3 - 106955855 CTC--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60035514 10 + 64156825 ----CTGCCGGTCG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061129 10 + 59248254 ----ccgccggtcg---- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45451455 1 + 49145316 ------------C----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19651873 4 - 122678785 ----CCTC---------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3694427 0 + 145441459 C e ponAbe2.chr19 55975788 678 + 60714840 M e chlSab2.chr6 46868975 3 + 50890351 I e papAnu2.chr19 47163614 0 + 51301725 C a score=201140.000000 s hg38.chr19_GL949753v2_alt 166116 84 + 796479 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- s panTro4.chr19 59098797 84 + 63644993 GTCTCCGGCGGCCGCGAGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102745785 84 - 106955855 GTCTCCGGCGGCCGCGCGGCCTGGTGGGATC---GCCCGGGGGCGGGGCCTGGCGCT-------CGGGCCC---------------------------------AGCAGGTGGTGATTTGCGACTGA- i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60035524 84 + 64156825 GTCTCCGGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061139 84 + 59248254 gtctccggcggccgcggggcctggcggGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163614 75 + 51301725 ---------ggccgcggggcctggcgggatc---gccctggggtggggcctggcgcT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46868978 84 + 50890351 GTCTCCAGCGGCCGCGGGGCCTGGCGGGATC---GCCCTGGGGTGGGGCCTGGCGCT-------CCGGCCC---------------------------------AGCAGGTGGTGAACGGCGGCTGA- i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45451456 84 + 49145316 GTCTCCGGCGGCCGCGGAGCCTGGTGGGATC---GTCCGGGGGCGGGGCCTGGCACT-------TGGGCCC---------------------------------AGCAGGTGGTGAACAGCGGCCGA- i calJac3.chr22 C 0 C 0 s mm10.chr7 3694427 59 + 145441459 -TCTTAACTGGTC------CCTGGGTAGATCTTGGCTGGGGGGCGGGG---GGGG--------------------------------------------------GCAGGTGGCAACCC--------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19651877 123 - 122678785 GTCTC-GGCGGCACCGGGGCCTGGTGGCATC---GCCCGAgggcggggtccggggcccagggggcgggcccggcggcagggggcggggccTGGTGTGGAAAATTGGCAGGTGGCGAAC-GCGGCCCCG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M a score=38572.000000 s hg38.chr19_GL949753v2_alt 166200 13 + 796479 GCGAGGCCCCGCC s panTro4.chr19 59098881 13 + 63644993 GCGAGGCCCCGCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60035608 13 + 64156825 GCGAGGCCCCGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061223 13 + 59248254 GCGAGGCCCCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163689 13 + 51301725 GCGAGGCCCCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869062 13 + 50890351 GCGAGGCCCCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451540 13 + 49145316 GCGAGGCCCCGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3694486 10 + 145441459 ---CAGCCCCGCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19652000 13 - 122678785 GCGAGGCTCCACC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55975788 678 + 60714840 M e nomLeu3.chr10 102745869 100 - 106955855 M a score=29580.000000 s hg38.chr19_GL949753v2_alt 166213 13 + 796479 CCCTGAGGCCTAG s panTro4.chr19 59098894 13 + 63644993 CCCTGAGGCCTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55976469 13 + 60714840 CCCTAAGGCCTAG i ponAbe2.chr19 M 678 C 0 s rheMac3.chr19 60035621 13 + 64156825 CCCTGAGGACTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061236 13 + 59248254 CCCTGAGGACTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47163702 13 + 51301725 CCCTGAGACCTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869075 13 + 50890351 CCCTGAGAATTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45451553 13 + 49145316 CTTTGTGGCCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3694496 13 + 145441459 CCTTGGGGGGTGA i mm10.chr7 C 0 I 1 s canFam3.chr1 19652013 12 - 122678785 -CCCCAGGCTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102745869 100 - 106955855 M a score=1517394.000000 s hg38.chr19_GL949753v2_alt 166226 369 + 796479 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCAGCGGT----------------CTGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- s panTro4.chr19 59098907 369 + 63644993 GGGCGGGGCTT--CGCCGAGACCCCGG-AGGCTTTGGGTGCTCT-GCAGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 55976482 353 + 60714840 GGGCGGGGCTT--CGCCGAGACCCCGG------------------GCGGCGGT----------------CCGCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCT-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGACTTGAACTC--------------------------------------- i ponAbe2.chr19 C 0 I 194 s nomLeu3.chr10 102745973 369 - 106955855 GGGCGGGGCTT--TGCCGAGACCCCGG-AGGCTTTGGGTGCGCT-GCGGCGGT----------------CCCCGGCGCGCA-GCTGTTTCGGTAACTGCTTTGCCTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i nomLeu3.chr10 M 100 I 194 s rheMac3.chr19 60035634 369 + 64156825 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGGGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i rheMac3.chr19 C 0 I 194 s macFas5.chr19 55061249 369 + 59248254 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACGT--------------------------------------- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47163715 369 + 51301725 GGGCGGGTCTT--CGCCAAGACCCCGG-GGGCTTTGCTTGTGCT-CCGGTGGC----------------CCGCGGCGCGCA-GCCGTTTCGGTAACTGCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCggggctcgaactc--------------------------------------- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46869088 369 + 50890351 GGGCGGGTCTT--CGCCAAGACCCCGG-AGGCTTTGGTTGTGCT-CCGGTGGC----------------CCGCTGCGCGCA-GCCGTTTCGGTAACTCCTTTGCTTCCC-GGCTCCCGCAGGAGGATGCTAGTGGTGGAGGTGGCGAACGGTCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGCAGGCCCTCCGGGAGCGCCTGGGTGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTCTGGTTAGCGCCCCGCGCCCAGACCCTCAGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i chlSab2.chr6 C 0 I 194 s calJac3.chr22 45451566 366 + 49145316 GGGCGGGGTTT--TGCC-AGATCCC-G-AGGCGCCGAGTGCTCTCCCGGGGGC----------------CCGCG--GCGCA-GCTGTTTCGGTGACCGCTTTGTCTCCC-GGCTCCCGCAGGAGGATGCTGGTTGTGGAGGTGGCGAACGGCCGCTCCCTGGTGTGGGGGGCCGAGGCGGTTCAGGCCCTCCGGGAGCGCCTGGGAGTGGGGGGCCGCACGGTAGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCACGCTTGGGCCTCCCGCTGCTGTTGATGCCCGAAGAGGCGCGGCTCCTGGCAGAGATCGGTGCTGTGACTCTGGTCAGCGCCCCGCGCCCAGACCCTCGGCACCACAGCCTGGTAAGG----------------------------------------------------------------------GGGCGGGGCTCGAACTC--------------------------------------- i calJac3.chr22 C 0 I 2 s mm10.chr7 3694510 373 + 145441459 GGGCGGGGTCTTGCGCTGAGGGCGTGGAAGACTTCAGTCGGG---TCGGTGG----------------------------G-GCTGTTTGGGTGACCGCGACGCACCCC-CACT-CCGCAGGAAGATGCTGGTGGTGGAGGTCGCAAATGGCCGCTCGCTGGTGTGGGGAGCCGAGGCCGTGCAGGCGCTGCGGGAGCGTCTGGGAGTCGGGGGACGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTTCCGCTTCTGCTGCTGCCTGAAGAAGCCCGGCTCCTGGCCGAGATAGGCGCGGTGACCCTAGTCAGCGCCCCGCGCCCGGACCCCCGCAACCATGGCTTGGTAAGAAACGAA----------------------------------AGGC-------CCTGA----------TAGTGGGAAGGCCTGGGA------------------------------------------ i mm10.chr7 I 1 C 0 s canFam3.chr1 19652025 496 - 122678785 GGGCGGGGCGT--CGCTGAGGcacccc-accccccacccccacc-ccacccccacccccacccccacctccGCGGTGGGAGCACTCTGTCGGTGACCGCTGTGCCTCCCTGGCCCCCGCAGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCCCTGGTATGGGGGGCCGAGGCGGTGCAGGCACTGCGGGAGCGTCTGGGAGTAGGGGGCCGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGCCAGAACTCGCGCCTGGGCCTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTTCTGGCCGAAATCGGCGCGGTGACCCTGGTCAGCGCCCCGCGCCCGGATCCGCGCCAACACAGCCTGGTAAGGGGCGGACGGGGTGGGGGCGGTGCAAACGCTCAGCACGTGGAGGCAGGACAGCCAGACTGCGGGTCTCTGCGGGAGGGGTCTGGGCGCCTTGGATTCTGGAGACTGGGATCCCCAGGTTCAGGCTTT i canFam3.chr1 C 0 C 0 a score=266952.000000 s hg38.chr19_GL949753v2_alt 166595 77 + 796479 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCTGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA s panTro4.chr19 59099278 77 + 63644993 GGGTTCGGTGGGAG--C---GGGACCTGGGAGTCAAGTTTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 55977029 77 + 60714840 GGGGTCGGTGGGAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGTGAA i ponAbe2.chr19 I 194 C 0 s nomLeu3.chr10 102746536 77 - 106955855 GGGTTCGGTGGAAG--C---GGGGCCTGGGAGTCAGGATTCTTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAA i nomLeu3.chr10 I 194 C 0 s rheMac3.chr19 60036197 77 + 64156825 GGGTTCGGTGGGAG--C---CGGGCCTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i rheMac3.chr19 I 194 C 0 s macFas5.chr19 55061620 77 + 59248254 GGGTTCGGTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAA i macFas5.chr19 I 2 I 192 s papAnu2.chr19 47164086 77 + 51301725 gggttcggTGGGAG--C---GGGACTTGGGAGTCAGGATTCCTGGTTTCCGAAGGGACCGTAAGCT-----TGGA------GGTTCCAGCGAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46869651 77 + 50890351 GGGTTCGGTGGGAG--C---CGGACCTGGGAGTCAGGATTCCTGGCTTCCGAAGGGACCATAAGCT-----TGGA------GGTTCCAGCGAC i chlSab2.chr6 I 194 C 0 s calJac3.chr22 45451934 77 + 49145316 GGATCTGGTGGGAG--C---GGGGCCTGAGAGTCCGGATTACTGGCTTCCGAAGCGACCATAAGCT-----TGGA------GGTTCCAGCGAA i calJac3.chr22 I 2 C 0 s mm10.chr7 3694883 81 + 145441459 GGGCCTGTTGGAAGGTT---GTAAACTG---GTCAGAATTCCTGTCTTCCTAAGGGACTGCAGGATGTGTCTTGG------GGTTCCAGTTAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19652521 85 - 122678785 GGGTTAGGGAGGAG--TCAGGGAGCCAGGGAGCCAAGGTTCCTGGCTTCCTAAGGCAGGGCAGACT-----TGGATCCTGGGATTCCCGCCG- i canFam3.chr1 C 0 C 0 a score=3160539.000000 s hg38.chr19_GL949753v2_alt 166672 753 + 796479 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCAA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCTGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTCTTT---------Tttttttttttgtctt s panTro4.chr19 59099355 755 + 63644993 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGTATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTtttcttttc-------tttttttttttgtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977106 752 + 60714840 GTGTGCTTCTCAGGCTCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCTGGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGTCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAGTCCAGTGACTGGGTCTCCCTGAGGA-TGAGAAAACTTTACCCCTTGAATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGGCCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCACGAGTTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGGGCCTCTGGTTGCTATGCCTTTCTATATGATCCCAATGTATTCTGTGtttttttt----------ttcttttttttgtctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102746613 744 - 106955855 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCTAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCA----------------------GCTCGAGCCAGGCTGCCAAAGAGGATGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CATGGGAGGTGGAGTCCAGGGACCACGGGAAGGAGAG-GAGAGATCTTTTAGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGATTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCTGGCCGCCCTGCCCACGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTATGGGTTGGAGCCTCTGGTCGCTGTGCCTTTTCATACGATCCCAATGTATTCTGCGTTTTTCTTTTCTAtcttttttttttttttgtctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60036274 758 + 64156825 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTGGA----GCCATGAGGCTGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGATCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGtttttttttctttc----tttttttttttgtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55061889 759 + 59248254 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCTGGCTCCAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAGCCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTCTttct---tttttttttttgtctt i macFas5.chr19 I 192 C 0 s papAnu2.chr19 47164163 756 + 51301725 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCAGGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--TATGGGAGGTGGAGTCCACGAACCacgggaaggagag-gagagatcTTTTGGAAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTActccccacc--------aggtccctcctcttCCCAAGCAGAGCCTTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGCTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGATTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTctgcgttttttttttct------tttttttttttctctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46869728 761 + 50890351 GTGTGCTTCTCAGGCCCTGACAGCCTTCAAGCGCCAGCAAGAGGAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGTCAGGAGCTCCTGGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAACTAGAACAGGCTTCAGGGGCCAGCTCGA----GCCATGAGGCCGGCTCGAGCCAGGCTGCCAAAGAGAACGAGACCAG---TGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCCCGTGAG--TATGGGAGGTGGAGTCCACGAACCACGGGAAGGAGAG-GAGAGATCTTTTGGAAATTTTAGCAGGGAATCCAGTGCCTGGGTCTCCCTGAGGG-TGAGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACTCCCCACC--------AGGTCCCTCCTCTTCCCAAGCAGAACCCTCAAATGGGGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCCAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATTTACAGAGACCTGTGGGAGAGAGGGTTCTTCCTCAGTGCGGCTGGCAAGTTCGGAGGTGACTTCCTGGTCTATCCTGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTGTGCCTTTCCATACGATCCCAATGTATTCTGCGTTTTTTTTTTTTCTTTC-Ttttttttttggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452011 749 + 49145316 GTGTGCTTCTCAGGCCCTGACATCCTTCAAGCGCCAACAAGAGCAGAGCTTCCAGGAGCAGAGCGCCTTGGCAGCTGAGGCCCGGGAGACCCGTCGGCAGGAGCTCCTAGAGAAGATTACGGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGCTTCAGGGGCCAGCGCGA----GCCAGGAGGCCGGCAGGAGCCAGGCTGCCAAAGTGAACGAGACCAG---TGATCTCCAGGCTTCGGGAGAGCAGGAGGAAGCCGGTGAG--CGTGGGAGGTGGAGTCCAGGGACCATGGGAAGAAAAG-GAGAGATCTTTTGGGAATTTTAGCTGGGAATCCAGTGCCTGGGTCTCCTTGAGGG-TGCGAAGACTTTGCCCCTTGGATTTACCAAACTCTTCTCTGTACT-TCAACC--------AGGCCCCTCCTCTTCCCAAGCAGGACCCTCAAATGGAGTAGCCCCCTTGCCCAGATCTGCTCTCCTTGTCCAGCTGGCCACTGCAAGGCCTCGACCTGTCAAGGCCAGGCCCCTGGACTGGCGTGTCCAGTCTAAAGACTGGCCCCACGCCGGCCGCCCTGCCCATGAGCTGCGCTACAGCATCTACAGAGACCTGTGGGAGCGGGGCTTCTTCCTCAGCGCGGCTGGGAAGTTTGGAGGTGACTTCCTGGTCTATCCGGGTGAGTTTGGGTTGGGGCCTCTGGTTGCTATGCTAGTCTTTACAATCTCAATGTATTCTGCGGttttc------------ttacctttcttctctt i calJac3.chr22 C 0 C 0 s mm10.chr7 3694964 741 + 145441459 GTTTACTTCTCAGGCCCTAGCATCGTTCAAACGCCAGCAAGAGCAGAGTTTCCAGGATCAGAACACTTTGGCAGCCGAGGCCCGGGAGACCCGGCGTCAGGAGCTTCTAGAGAAGATCGTAGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAACAGGATTCAGGGGC-AGATGAAGGAGGCCAAGAAGCCGGTGGAAGTGAGGCTACCCAAGGGAGTGAGACCAGTGATGATGGCCAGCCTTCTGCGGAGCAGGAGGGAGCAGGTGAGATTTTAGGATTTAGAGTTAA--AATTTGGGGCAGGAGGG-AGGGAAACTTTGGAGAATTTTAG---------------TTGGATTTTTCTGGCGC-TAAGGAGACCTTG-----TGGACTCAGTAAATTCTTTT---TGCTCCCAGCCCCATCCCTAGATTCTTCATCTCCCCAACCAGGACCTTCAAATGGGGTGACTCCCTTGCCCAGATCAGCCCTGCTTATCCAGCTGGCCACTGCCAGGCCTCGGCCTGTAAAAGCTAAGCCTCTGGACTGGCGTGTGCAGTCCAAAGACTGGCCCCATGCTGGCCGTCCTGCCCACGAGCTGCGCTACAGCATCTACCGAGACCTGTGGGAGAGAGGTTTCTTCCTCAGCGCAGCAGGGAAGTTTGGTGGTGACTTCCTGGTCTATCCTGGTGAGTTTGG---GGGGACTCTGGTGGCTGTACCTTTTCTAATGGTCTTTATTTGTTGTGCATTTTCTTTT---------TTTTGTCCCATTTCTT i mm10.chr7 C 0 I 4761 s canFam3.chr1 19652606 691 - 122678785 CTTTACTTCTCAGGCTCTGGCATCCTTCAAACGCCAGCAAGAGCAGGGCTTCCAGGAGCAAAGCGCCCTGGCAGCGGAGGCCCGTGAGACTCGTCGTCAGGAACTCCTAGAGAAGATTGCAGAGGGCCAGGCTGCGAAGAAACAGAAGCTGGAGCAGGAATCGGTGGCCAGCGAGA----GCCAGGAGGCCAGTGCGAACCCGGCTGCCGCAGAGAGTGAGGCCGG---TGCGAGCCAGGCTCCTGGAGAGCCGGAGGAAGCAGGTGAG--GGTGGGA-GTGGAGTCCACGGACCAGGAGCAGGGGAGAGGGAGATCTTTTGGGAATCCTGGCTGGGAATCTAGGGCCTGGGGCTCATTGGGGGATGGGAAGACCTG--TCCTTGGATGCATCAGACTCTTGCATTCACCTCCCGC---------AGGTTCCTCCTCTCCTCAGCCAGGGCCGTCAAATGGAGTGGCCCCTTTGCCCAGGTCGGCTCTGCTGGTCCAGCTGGCCACTGCTAGGCCTCGACCTATCAAGGCTAGGCCCCTGGATTGGCGTGTCCAGTCCAAAGACTGGCCGCATGCTGGCCGTCCTGCCCATGAGCTTCGCTATAGCATCTACAGAGACCTGTGGGAACGAGGCTTCTTCCTCAGTGCAGCTGGCAAGTTCGGGGGTGACTTCCTGGTCTATCCTGGTGAGTTTTG-TTGGGACCTCTCCTTGT-------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=775530.000000 s hg38.chr19_GL949753v2_alt 167425 259 + 796479 aatagaggtggggtctc--ttgttgcttaggctggtccctattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCTGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT s panTro4.chr19 59100110 261 + 63644993 aatagaggtggggtctctattgttgcttaggctggtcccgattcctgggctcaagcaatccttccacctcggccccccaaagtgctggaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAACGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55977858 261 + 60714840 aatagaggtggggtctctattgttccttaggctggtcccaattcctgggctcaagcaatccttccacctcagccccccaaagtactgaaattataggcCCAGCTGCA------TTTTTCTTTTTTGTCTCATTTTCTCTTAGTCTCTGAAATTCATAGACAGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAATGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747357 258 - 106955855 aatagaggtggggtctctattgttgctcaggctggtcccaattcctgcgcttaagcagtccttccacctcggcctcccaaagtgctggaattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTTTTAGCCTCTGAAATTCAT----AGACAGGAAACATTTGGGAGCTCCCGAACTCATTGGGCAAGCAGTTTAGCGACTTTTATTAAATGATTACTGTGATCCAGAAGATTCATTTAGAAATAAGTTAGACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037032 265 + 64156825 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcCCAGCGGCA--TTTTTTTTTTTTTTTTGTCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062648 263 + 59248254 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacttcggcctcccaaagtgctgggattacaggcccagctgca----ttttttttttttttgtCTCACTTTCTCTTAGCCTCTGAAATTCATAGATGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTATGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47164919 267 + 51301725 aatggagatggggtctctgttgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccaaagtgctgggattacaggcccagctgcattttttttttttttttttgtctcacttTCTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAACTCATTGGGAAAGCAGTTTAGCaacttttattaaatgtttactgtGATCCAGAAGATTCACTTAGAAGT-AGTTAGACAt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870489 264 + 50890351 aatagagatggggtctctattgttgctcaggctggtcccgtttcctgggctcaagcagtcctcccacctcggcctcccgaagtgctgggattacaggcCCAGCTGCA---TTTTTTTTTTTTTTTGTCTCACTTTGTCTTAGCCTCTGAAATTCATAGACGGACAGGAAACATTTTGGAGCTCCTGAAATAATTGGGAAAGCAGTTTAGCAACTTTTATTAAATGTTTACTGTGATCCAGAAGATTCGCTTAGAAGT-AGTTAGACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45452760 257 + 49145316 aacagagatggggtctgtgttgttgctcaggctggtcccaattcctgggctcaagcaatcttcgcacctcagcctcccaaagtgctgggattacaggcCCAGCTGCA------TTTTTCTTTTTTGTCTCACTTTCTGTTAGCTTCTTACATTCACAGATGGACAAGAAACATTTGAGAGCTCCCCAACTCACTGGGCAAGCAGTTTAGCGACTCTTATTAAATGCTTACTGTGATCCAGAAGATTAACTCAGAAGC-----AGACAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19653297 183 - 122678785 ------GAAAGAGACCTCCTTTTTCCTCAAAGCCCTCCCCTTTTTT-------CGCAAGCCTGCCACC---------------------------------------------TTTTTGTCTTT------------TCTCAGCCTCTGAAACCCATGGAAGGACAAG-AAcacttgggaac---------catttgaagggcagtatagtaaatc----taagcactttctttgatccagaagtttcactcagagac-tcttagatat i canFam3.chr1 C 0 I 3128 e mm10.chr7 3695705 4761 + 145441459 I a score=339242.000000 s hg38.chr19_GL949753v2_alt 167684 112 + 796479 CAggctgggcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc s panTro4.chr19 59100371 109 + 63644993 ---gctgtgcgcaatggctcacgcctgtaatcccaacactttgggaggccaagacaggtggatcacctgaggtcaggagtttgataccagtctggccaacatggtgaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978119 112 + 60714840 CAggctgggcgcagtggctcatgcctgtaatcccagcactttgaaaggccaagacaggtggatcacctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747615 112 - 106955855 CAggctgggcgcaatggctcacacctgtaatcccaacactttgggaggccaagacaggtggatcatctgaggtcaggagtttgagaccagtctggccaacatggtgaaaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037297 112 + 64156825 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55062911 112 + 59248254 CAggctgggcgccatggctcacgcctgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165186 112 + 51301725 caggctgggcgccatggctcacgcccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870753 112 + 50890351 CAggctgggcgccatggctcacacccgtaatcccagcactttgggaggctgagacaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453017 111 + 49145316 CAggccg-gtgcgatggctcacgcctgtaatctcagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaagaccagcctggccaacgtgaagaaaccc i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=394773.000000 s hg38.chr19_GL949753v2_alt 167796 167 + 796479 catctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaagcaggagaatcatgtgaacccagggggcagaggttgtagtgagccaagatcgtgccattgcactccagcctgggggacaagagcgagactt s panTro4.chr19 59100480 167 + 63644993 catctctactaaaaatactaaaactaactgggtgtggt-ggtgggtgcctgtatttctagctactcgggaggctgaagcaggagaatcacgtgaacccacggggcagaggttgtagtgagccgagatcgtgccagtgcactccagcctgggggacaagagcgagactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978231 167 + 60714840 cgtctctactaaaaatactaaaactaactaggcatggt-ggtgggcgcctgtatttccagctactcgggaggctgaggcaagagaatcacatgaacccagggggcagaggttgtagtgagccgagatcgtgccattgcactccagcctgggggacaagagcaagactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747727 167 - 106955855 cgtctctactaaaaatactaaaactaactgggcgtggt-ggtgggtgcctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgtagtaaaccaagattgtgccattgcactccagcctgggggacaagaatgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037409 168 + 64156825 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccattgtactccagcctggcgaacaagagcgagactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063023 168 + 59248254 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcaggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatggtgccactgcactccagcctggggaacaagagcgagactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165298 168 + 51301725 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcgcctgtatttccagctactcgggagcctgaggcaggagaatcacttgaacccggggggcagaggttgcagtgagctgagatcgtgccattgcactccagcctggggaacaagagcgagactt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46870865 168 + 50890351 cgtctctactaaaaatactaaaactagctgggtgtggtgggtaggcacctgtatttccagctactcgggaggctgaggcaggagaatcacttgaacccagggggcagaggttgcagtgagctgagatcatgccattgtactccagcctggggaacaagagcgagactt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I e calJac3.chr22 45453128 0 + 49145316 C a score=13970.000000 s hg38.chr19_GL949753v2_alt 167963 15 + 796479 tgtctc----aaaaaaaaa s panTro4.chr19 59100647 19 + 63644993 tgtctcaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978398 11 + 60714840 tgtctc--------aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747894 13 - 106955855 cgtctc------aaaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037577 12 + 64156825 cgtctc-------aaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063191 13 + 59248254 cgtctc------aaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165466 11 + 51301725 cgtctc--------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871033 16 + 50890351 cgtctc---aaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453128 8 + 49145316 tgtctt-----------ta i calJac3.chr22 C 0 C 0 e mm10.chr7 3695705 4761 + 145441459 I e canFam3.chr1 19653480 3128 - 122678785 I a score=234839.000000 s hg38.chr19_GL949753v2_alt 167978 78 + 796479 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG s panTro4.chr19 59100666 78 + 63644993 aaaaaaaaaaaGCCTAGAAGTGGAATAGTTGTGTCCAAG-AGCATCTGTTTTAGAGTATCTATAGTGATGGCTGAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978409 78 + 60714840 aaaaaaaaaaaGCCTAGAAGTGGAATAGCTGTGTCCGAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747907 78 - 106955855 aaaaaaaaaaaGCCTAGAATTGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATGGCTGAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037589 77 + 64156825 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063204 77 + 59248254 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCTAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165477 77 + 51301725 aaaaaaaaaaagtctag-agcGGAATAGTTGGGTCCAAG-AGGATCTGTTTTAGAGCATCCATAGTGATCGCTGAAATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871049 77 + 50890351 aaaaaaaaaaaGTCTAG-AGCGGAATAGTTGGGTCCAAG-AGCATCTGTTTTAGAGTATCCATAGTGATTGCTGAAATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453136 78 + 49145316 aaagaaaaaaaatCTAGAAGTGTAGTAGTTG-GTCCAAGCATTATCTGGTTTAGACCATCCAGAGGAGTTGCTGAAATG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19656608 78 - 122678785 aagtaaaaaatgccaaaaagtggaactgctaggtacaag-aagagctatttggaaatattcatagtgattactaaaatg i canFam3.chr1 I 3128 C 0 e mm10.chr7 3695705 4761 + 145441459 I a score=2580084.000000 s hg38.chr19_GL949753v2_alt 168056 661 + 796479 ATCTCAGATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCCAGCCGTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCTTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttggtatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggagggg s panTro4.chr19 59100744 661 + 63644993 ATCTCAAATCTCCTCCCAGTGGTCGTTCCCGTGGCGTCTAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTA-GGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTA------GGAGTCTAGAACATCCTCCTACCTTTCTCCGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCTTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttacataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------gtggatggtctcatctgcatgtacaggtgagaaaaaggcctggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55978487 660 + 60714840 ATCTCAAATCTCCTCCCAGTGGTCATTCCCGTGGCGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTTCGCTTCCACGCTCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCTATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGGGGATGTGGC--TGTCTGCAGCAAGAGCCTTTCTGGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTTCTACCTTTCTCCATGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCATTTTTATGT--------------TCTTCCTTGTTTCAAAGCACATattggctgtg---t--ttttgtagttacctattttcacactgtgagcttcccgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggaggtctcaataaacttgttatataaat-----gttcatgatttgaatgtttgcgacagtcctggaaccc------ctggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102747985 650 - 106955855 ATCTCAAAT---CTCCCAGTGGTCGTTCCTGTGGTGTCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGCCTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCACGCCCATTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAAGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAGCTCCAGAGACCTAGGGGGATGTGGCTGTGTCTGCAGCAAGAGCCTTTCTGGAGGTT--CCCCAGCTTTTCTCTG------GGAGCCTAGAACATC---CTACCTTTCTCCGTGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACGTCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTCCCTGTTTTCACACCGTGAGCTTCCCGAGAATG------G----GGTTTGATTCA--TCT--GTTTTCTACAGGGTTTAAATCTCAGGAGGTCTCAAtaaacttgttatataaat-----gttcatgatttgaatgtttacgacagtcctggtacct------gtggatggtctcatctgcatgtacagatgagaaaaaggcctggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60037666 661 + 64156825 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATTGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTTCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTAcatcctttttatgt--------------tcttccttgtttgaaagcacttattggctgtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgataaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063281 661 + 59248254 ATCTCAAATCTCCTCCCAGTGGTCATTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGCGCTTCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGtg---t--ttttgtagttacctgttttcacactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcagaagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatacagatgagaaaaaggcctggaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47165554 661 + 51301725 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAgtgcttctctccctcccccaggtgACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCGGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTGAAAGCACTTATTGGCTGTG---T--TTTTGTAGTTACCTGTTTTCACACTGTGAGCTTCCTGAGAATGGGGCCTG----GGTTTGATTCA--TCT--GTTTTCTACAGGGtttaagtctcaggagatctcaATAAACTTGTTATATAAAT-----GTTCATGATTTGAATGTTTATGACAAACCTGGAACCG------GTGGATAGTCTCATCTGcatatacagatgagaaaaaggcctggaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871126 660 + 50890351 ATCTCAAATCTCCTCCCAGTGGTCGTTCCTGTGGCATCCAGCCCTCTGCCATTGGTCACTGCTTCAGTGC-TCTCTCCCTCCCCCAGGTGACCCCCTCCGCTTCCATGCCCACTACATCGCTCAGTGCTGGGCCCCGGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCCGAAAGACCCTGCTCCTCTGTTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCTTGCAATGGGCCAGCCTGCAGTGAACTCCA-AGACCTAGGGGGACATGGCTGTGTCTGCAGCAAGAGCCTTTCTAGATGTT--CCCCAGCTCTTCTCTG------GGAGTCTAGAACATCCTCCTACCTTTCTCTGCGGTTAGTTTTTGATTCCAGGTTTTCGAACACTACATCCTTTTTATGT--------------TCTTCCTTGTTTCAAAGCACTtattggctgtg---t--ttttgtagttacctgttttcccactgtgagcttcctgagaatggggcctg----ggtttgattca--tct--gttttctacagggtttaagtctcaggagatctcaataaacttgttatataaat-----gttcatgatttgaatgtttatgacaaacctggaaccg------gtggatagtctcatctgcatatatagatgagaaaaaggcctggaggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453214 662 + 49145316 CTCTCGCATCTCCCACCAGCAGTCACTCCTGTGGCTTCTA-CCCCCTGCCATTGGCCACTGCTTCAGTGCCTCTGTCC--CCACCAGGTGACCCACTCCGCTTCCACGCCCACTACATCGCTCAGTGCTGGGCCCCCGAGGACCCCATCCCACTCCAGGACCTGGTTGCTGCTGGGCGCCTTGGAACCAGCGTCAGAAAGACCCTGCTCCTCTGCTCTCCGCAGCCTGATGGTAAGGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTGCAGTGAACTCCAGAGACCTAGGCGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTCTGGATGTT--CCCAAGCTTTT-TCTG------GGAGTCTAGAACATCCTCCCACCTTTCTCTGCGCTTAGTTTTTGATTCCAGGTTTTCCAACGCTAAGTCCTTTTTATGT--------------TCTTCCTTGTCTCAAAGCACTTCCTGGCTGTG---TTGTTTTGCAGTTACCTGTTTTCACactgtgagcttcctgagaatgggaactg----ggtttgattcatctct--gttttctacaggggttaagtctcaggaggtctcaataaacttgttatctgaat-----gTTCATGAGttgaattcttatgacaatcctggaacct------gctggcggtcttatctgcatgtacagatgagaaaaaggcctggaggag i calJac3.chr22 C 0 C 0 s mm10.chr7 3700466 621 + 145441459 ATGTCAGATCTCATCCCAG-----------------------CCCCTGCGGAGGGGAACTGCT---ATGCATCTTTCTTTCCCCCAGGTGATCCACTGCGTTTCCATGCTCACTACATTGCTCAGTGCTGGTCTGCTGAGGACCCCATCCCACTTCAGGACCTGGTCTCTGCAGGCCGCCTGGGAACCAGTGTCAGGAAGACCCTGCTGCTCTGCTCCCCTCAGCCTGATGGGAAGGTGGTCTACACATCCCTGCAGTGGGCCAGCCTGCAGTGAGCT------------GGAGAC-------TGTGTGTGGCAAGAACCCTCTTCAATGGTCACCCCAGCTCATCTCTGCAC---GGAGGCTTG--CGCTCTCCTGC---TCTGCCTGGTTTG-TTCCGATTCCAGGGTTTTGAACACTACATCCTTTCTGTTTGTTTTTTGGTTTTGTTTTTCCTGTTTTAAGGCGATTACTACCTGTG---TTGTTCTTTATTT---TGTTTCCAAATTGT--GCTTGTTGAGCATGGAGACTGCTTTTGTTTGGCTTT--TGT--GTTTCTTGCGGGGCTTAGGTTCCTGCAGTTCT-AATAAATTTGTTGAATAAAT-----GTTTGTATTttgagtccttacaacaatccttgaaatg------tggggc--tctcattcctgtattcagatgagaaaa-------gggaat i mm10.chr7 I 4761 C 0 s canFam3.chr1 19656686 677 - 122678785 -ATTCCTGTCTCCTACCTGTAGACATTCCAGTGTCTTCTAGCCTTCTACCACTGGGAACTGCTACA---TGTCTCTCTTTTACCCAGGTGACCCACTTCGTTTCCACGCCCACTACATTGCTCAGTGCTGGGCTCCTGGGGACCCCATTCCACTCCAGGACCTGGTTTCTGCTGGCCGCCTGGGGACCAGCGTCAGAAAGACGCTGCTGCTCTGTTCCCCTCAGCCTGATGGTAAAGTGGTCTACACCTCCCTGCAGTGGGCCAGCCTACAGTGAACTCCAGAGACCCGTGGGGATGTGGCTGCATCTGTGGAAAGAGCCTTTCTAGATGGT--CCCAAGCTCATCTCTGCAAATGGGAGGCTGTTA-ACCCTCCTACCTCTTTCTGCGGTTAGATTTTGACTCCGGATTTATAAACACTACATCCTTCTTATTT--------------CCCTCCCTGTTTCAAAGCACTTATTGGCtgtgatat--ttttgtagttacctatttccaagctgtgagcttcttgagggtgaagactg----ggtttgattca--tctccagtttctacagggcttagggc-caagaggtctcagtaaacttgttgaataaacgCGGAGTCTGTGTTTTGAATTCTGATGGCAATGGGGGGAGGGGGCAGTGTGGGTTTTTGCATTTGCTTATACAGAGGAGGGAA-TGCCTGGAGGAG i canFam3.chr1 C 0 I 1091 a score=386208.000000 s hg38.chr19_GL949753v2_alt 168717 121 + 796479 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-cctctTGAAAAGAT s panTro4.chr19 59101405 121 + 63644993 ggggactgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctacctcactaaactt-ccttttgAAAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979147 122 + 60714840 ggggaatgacttgcccaaagtcacacacttagtaaatagcaggcctggcctttcaaaattggtttttctgactcctaaatctgcactctttctaccgcactaaacttcccttttgAAAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748635 120 - 106955855 ggggaatgatttgcccaaagtcacacgcttagtaaatagcaggcttggcctttcaaaattgg-ttttctgactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038327 121 + 64156825 ggggaatgacttgcccaaagtcacacagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-ccttttgAAAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55063942 121 + 59248254 ggggaatgacttgcctaaagtcacacagttagtaaatagcaggcttggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166215 121 + 51301725 ggggaatgacttgcccaaagtcacacagttagtaaatAGCAGGCCTGGCCTTTCAAAATTGGTTTTCCTCACTCCTAAATCTGCACTTTTTCTACCGCACTAAACTT-CCTTTTGAAAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871786 121 + 50890351 ggggaatgacttgcccaaagtcacatagttagtaaatagcaggcctggcctttcaaaattggttttcctcactcctaaatctgcactctttctaccgcactaaactt-cctttTGAAAAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453876 118 + 49145316 ggg--atgacttgcc-aaggtcacacagctagtcaacagcaggcctggcctttaaaaatgtttttttctgactcctaaatctgcactctttctaccacactaaactt-ccttttgAAAAGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3701087 110 + 145441459 gggaaatgacttgaccagggtcacaaaact----------gggcctgggccattatacctggtctttgtgattcaggaatctgc-ctcttttcattgcactaAGGGT-TGCCTTGAAGATAT i mm10.chr7 C 0 I 2697 e canFam3.chr1 19657363 1091 - 122678785 I a score=518199.000000 s hg38.chr19_GL949753v2_alt 168838 210 + 796479 TTCTATGAAATTTCCCAGATGCATACAAACGTtataaataaaaatat---------aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcagggggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag s panTro4.chr19 59101526 210 + 63644993 TTCTATGAAATTTCCCAGATGCATACAAACGTTATAAATAAAAATAT---------Aggctgggcacgatgacccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataattaaaaaaaaaattagccag----------ggatcccttgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979269 210 + 60714840 TTCTATGAAATTTTCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggccgggcacgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagcccaggagtttgagaccagctctggc-aacattgtaatacccagtctctacaaaaaataatttaaaaaaaaattagccag----------ggatcccttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748755 218 - 106955855 CTCTATGAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATATAGGCCTGGCAggccgggcgtggtggctcacgcctgtaatcc--cagcactttgggaggccgaggtgggcggatca--tgaggtcaggagatcaagac--atcctggctaacatggtgaaaccctgtctctactaaaaat------acaaaaaattagccgggcgtggtggcgggtgcctgtag i nomLeu3.chr10 C 0 I 9 s rheMac3.chr19 60038448 204 + 64156825 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtctaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------GGATCCCTTGAG i rheMac3.chr19 C 0 I 58 s macFas5.chr19 55064063 204 + 59248254 TTCTACAAAATTTCCCAGATGCATACAAAGGTTATAAATAAAAATAT---------Aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagcttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccatgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166336 204 + 51301725 TTCTACAAAATTTCCCAGATGCATACAAaggttataaataaaaatat---------aggctgggcatgatggcccacacctgtaatcccacagaacttttggaggccaaggcaggaggatcgcttgagtccaggagtttgagaccagctctgGC-AACACTGTAataccca-tctctacaaaaaataattt-taaaaaaattag--------------ggatcccttgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46871907 204 + 50890351 TTCTATAAAATTTCCCAGATGCATACAAAGGTtataaataaaaatat---------aggccgggcatgatggcccacacctgtaatcccacagaacttttagaggccgaggcaggaggatcgcttgagtccaggagtttgagaccagctctggc-aacactgtaataccca-tctctacaaaaaataattt-aaaaaaaattag--------------ggatcccttgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45453994 188 + 49145316 TTCTATGAAACTTCTCAGATGCATGC-------ATAAATAAAAATAT---------Aggctgggcgtgatggctcacacctgtaatcccacagcactttgggaggccatcgcaggaggattgcttg--------------agaccagctctggt-gacgctgtaataccccatctctacaaaaaaataatt-taaaaaaattagccag----------ggatcccttaag i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=38892.000000 s hg38.chr19_GL949753v2_alt 169048 16 + 796479 cctgggaagttgaggc s panTro4.chr19 59101736 16 + 63644993 cctgggaagttgaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979479 16 + 60714840 cctggaaagttgaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102748982 16 - 106955855 ctcgggaggctgaggc i nomLeu3.chr10 I 9 I 485 s macFas5.chr19 55064267 16 + 59248254 cctgggaagttgaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166540 16 + 51301725 cctgggaagttgaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872111 16 + 50890351 cctgggaagttgaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454182 16 + 49145316 cctgggaagttgaggc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=70805.000000 s hg38.chr19_GL949753v2_alt 169064 27 + 796479 tgctgtgagctgtgattgcaccactgc s panTro4.chr19 59101752 27 + 63644993 tgctgtgagctgtgattgcaccactgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979495 27 + 60714840 tgctgtgagctgtgattgcaccactgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749483 27 - 106955855 tgctgtgagctgtgattgcaccactgc i nomLeu3.chr10 I 485 C 0 s macFas5.chr19 55064283 27 + 59248254 tgctgtgagctgtgattgcaccactgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166556 27 + 51301725 tgctgtgagctgtgattgcaccactgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872127 27 + 50890351 tgctgtgagctgtgattgcaccactgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454198 27 + 49145316 tgctgtgagctgtgatcgcaccactgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e rheMac3.chr19 60038652 58 + 64156825 I a score=130611.000000 s hg38.chr19_GL949753v2_alt 169091 68 + 796479 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt s panTro4.chr19 59101779 68 + 63644993 cctccagcctgggagacagagcaag--aacctgtctcaaaaa------atatatatatgtgtgtgtgtatatatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979522 66 + 60714840 actccagcctgggagacagagcaag--aacctgtctcaaaaa--------atatatacgtgtgtgtgtatatatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749510 70 - 106955855 actccagcctgggagacagaacaag--accgtgtctcaaaaaa----tatatatatatgtgtgtgtgtatatatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038710 51 + 64156825 TATCCAGCCTGGGAGACAGAGCAAG-------------------------ACATGTATGTGTGTGTGTATATATAT i rheMac3.chr19 I 58 I 32 s macFas5.chr19 55064310 50 + 59248254 actccagcctgggagacagagcaag-------------------------acAtgtatgtgtgtgtgtatatatg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166583 69 + 51301725 actccagcctgggagacagagcaag--atcctgtctcaaaaa-----tctacatgtatatatatgtgtgtatatat i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46872154 69 + 50890351 actccagcctgggagacagcgcaag--atcctgtctcaaaaa-----tctatatgtatatatacgtgtgtatatat i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45454225 76 + 49145316 actccaacataggagacagagcaagagaccttgtctcaaaaaaaaagtgtgtgtctgtgtgtgtgtgaatatatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=11518.000000 s hg38.chr19_GL949753v2_alt 169159 8 + 796479 aaatatac s panTro4.chr19 59101847 8 + 63644993 aaatatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979588 8 + 60714840 aaatatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749580 8 - 106955855 aaatacac i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47166654 8 + 51301725 aaatacac i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46872225 8 + 50890351 aaatatac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45454301 8 + 49145316 acatatgt i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I e macFas5.chr19 55064360 0 + 59248254 C e rheMac3.chr19 60038761 32 + 64156825 I a score=17468.000000 s hg38.chr19_GL949753v2_alt 169167 26 + 796479 acacatgtatgtatatatatgtgtgt s panTro4.chr19 59101855 26 + 63644993 acacatgtatgtatatatatgtgtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979596 26 + 60714840 acacgtatgtgtatatatatatgtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749588 11 - 106955855 atacacgtgtg--------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038793 20 + 64156825 ------AAatctatatgtatatatat i rheMac3.chr19 I 32 C 0 s macFas5.chr19 55064360 1 + 59248254 -------------------------t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166662 26 + 51301725 acacgtacgtgtgtgtatagatatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872233 26 + 50890351 acacacacgtatgtgtgtgtgtatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454309 26 + 49145316 atatgtgtgtgtgtatatatgtatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19657363 1091 - 122678785 I a score=1007313.000000 s hg38.chr19_GL949753v2_alt 169193 331 + 796479 gtatatatatatatattatGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AA----AGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTGG-----------AGAATT-TTTTTGATACTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATTTGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA s panTro4.chr19 59101881 335 + 63644993 gtgtatatgtatatatTATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCCTGGGGAG--AACGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATGCTGTATATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTAAAAAATTTGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGAAGTTTTATTTTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979622 329 + 60714840 g----tatatatatatCATAAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AACGTCAGGAAGTACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC---TTTTGGA--TGTGTTATATTCTGCAGTTTTTATAAAAGCTAAAACACATGTATATGTAAAAAACTTGCACTTACAAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTATGTTTA-----TTCCAATAATTACACCTTTATCTTATCAATGTGCAGTTTTATTTTGTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749599 328 - 106955855 -----tgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AATCTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCACGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTGTACATTTATATTTTAGACTC-TTTTTTGGA--TGTGTTATATTCTGCAATTTTTATAAAAGCTAAA--ACATGTATATGTATAAAATATGCACTTATGAAATCATTTACCCATGTTTTTGCTTAAGA--AAGTACTGGAACACTACCATTA-----TTTCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60038813 336 + 64156825 gtgtgtgtatatatatCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAATTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064361 336 + 59248254 gtgtgtgtATATATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCGTGGGGAG--AGTGTCAGGAATGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAATT-TTTTTGATACTATACATTTATATTTTAGACTCTTTTTTTGGA--TTTGTTATATTCTGCAACTTTTATAAAAGCTAAAACACATGTATATGTATAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47166688 336 + 51301725 gtgtgtgtatatatatcatgaAAGGAA-----ATGAG--TATTGTAATTTCAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAGGACTCTGGAA-----GGCATTCTGC--------TTTTTCATGGCCTGGGTAGTGGTTG-----------AGAatt-tttttgatactatacatttatattttagattctttttttgga--tttGTTATATTCTGCAATTTTTATAAAAGCTaaaacacatgtatatgtataaaatatgcaCTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTACACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872259 336 + 50890351 gtgtgtgtgtgtATATCATGAAAGGAA-----ATGAG--TATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--AGTGTCAGGAAAGACTCTGGAA-----ggcattctgc--------tttttcatggcctgggtagtggttg-----------agaatt-tttttgatactatacatttatattttagactctttttttgga--tttgttatattctgcaattTTTATAAAAGCTAAAACACATGTATATGTGTAAAATATGCACTTACGAAATCATTTATCCATGTTTTTGCTTAAGA--AAGTACTAGAACACTACCACTA-----TTCCAATAATTTCACCTTTATCTTATCAATATGCAGTTTTATTTTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454335 331 + 49145316 gtacatacatatgAAAGAAAAAAGGAG-----ATGAGAATATTGTAATTTTAGGA-----GTTCAGAGCATGGGGAG--GATGTCAGGAAGGACTCTGGAA-----GGCGTTCTGC--------TTTTTCATGGCCTGGGTAGTAGTTG-----------AGAATT-TTTTTGCTGCTGTACATTGATATTTTAGACTC-GTTTTTTTA--TGTGTTATATTCTGCAACTTTTACAAAAGCTAAA--ACATGTATGTGTATAAAATACGCACTTTTGAAATCGTTTACCCACGGTTTTGCTTAGAACTCGGTACTGGAACACTGCCACAA-----ATCTAGT------ACCTTTATCCTACCAGTGTGCAGTTTTATTTTGTCA i calJac3.chr22 C 0 I 17 s canFam3.chr1 19658454 358 - 122678785 GCATAAATAAAAGTAACATGAAGAAAAGGCACATGAG--TGTTGCAGTTTCAGGACAGAGGTTCAG---GTggggaggtaatgtcaggagggacacttggggctgtggaatgctgctggtggtttttttcttggcctgggtggtgtttattcaggtgtgtagcattattttttataccatacgtttatgattcagatcatttttttatatgtgtgttctgttccacCCTTTCTTAAAAAGTGGAAACACATCCA----AAGAAAATACACATTTGTGAGAT---------GCCTTTCTGCTTGAAA--TATTGCTTGAACGTTATCAGTACTGACTTTCAATATTTACGTATATACTTTAAAAATGCATAG------TTTGTTA i canFam3.chr1 I 1091 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=67452.000000 s hg38.chr19_GL949753v2_alt 169524 26 + 796479 CGTTTATTTTGTCAGTGTAATACATT s panTro4.chr19 59102216 26 + 63644993 CGTTTATTTTGTCAGTGTAATACATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979951 26 + 60714840 CGTTTATTTTGTCAGTGTAATACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749927 26 - 106955855 CATTTATTTTGTCGGTGTAATACATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039149 26 + 64156825 CGTTTATTTTGTCAGTGTAATACATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064697 26 + 59248254 CGTTTATTTTGTCAGTGTAATACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167024 21 + 51301725 CG-----TTTGTCAGTGTAATACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872595 26 + 50890351 CGTTTATTTTGTCAGTGTAATACATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658812 26 - 122678785 CATAGATTTTGTTACTGAAATACAGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=666814.000000 s hg38.chr19_GL949753v2_alt 169550 311 + 796479 CACATGGTGAGTctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccgcctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC s panTro4.chr19 59102242 311 + 63644993 CACATCATGAggctgggcgtggtggcttatgcttgtaatcccagcactttgggagaccaaggcgggcggatcatgaggtcaggagttccagagcatcctggccaacatgg------cccacctctatgaaaaatacaaaaatt-agccgggcgtggtggcgggcgcctgtaatcctagctactccggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcacgccactgcactccagtctgggcgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55979977 311 + 60714840 CACATGGTGAggctgggcgtggtggcttatgcttgtaatctcagcactttgggagacgaaggcgggcggatcacgagatcaggagttcgagaccatcctggccaacatgg------cccacctctacgaaaaatacaaaaatt-agctgggcgtggtggcaggcgcctgtaatccctgctactcgggaggctgaggcaggagaatcacttgaatctgggaggtggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggtgacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102749953 317 - 106955855 CACACGGTGAggccgggcatggtggctcatgcttgtaatcccagcactttgggaggccaaggcgggcggatcacaaggtcaggagttcgagaccatcctggccaacatggtgaaaccctgcctctacgaaaactacaaaaatt-agctgggcatggtggcgggcgcctgtaatcccagctactcgggtggctgaggcaggagactcacttgaatctgggaggcggaggttgcagtgagccaaggtcgcgccactgcactccagtctgggcaacagagctagacactgtctcaaaaaaacaaaaacaaacaaaa---aCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039175 314 + 64156825 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccaggc-tggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55064723 315 + 59248254 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgagatcaggagttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaattgagccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaataaaacaaaaacaaacaaaaaagaCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167045 313 + 51301725 CACATGGTGAGGCCGGGCGCA-Gggctta------caatcccagcactttgggaggccgaggcgggcagatcacggaGGTCGGAgttcgacaccatcctggccaacatggtgaaaccccgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctactcggcaggctgaggcaggagaattgcttgaactcgggaggcagaggttgcagtgagccgagatcgtgctactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaaaaacaaacaaaaaagacatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872621 310 + 50890351 CACATGGTGAggccgggcgcaggggctta------caatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggatttcgacaccatcctggccaacatgctgaaaccctgcctctactaaaaatgcaaaaatt-agccgggcgtggtggcgggtgcctgtaatcctagctacttgggaggctgaagcaggagaattgcttgaactcaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagtctgggcgacagagctagactctgtctcaaaaaaacaa----aaacaaaaaagaCATT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658838 0 - 122678785 C e calJac3.chr22 45454666 17 + 49145316 I a score=23180.000000 s hg38.chr19_GL949753v2_alt 169861 7 + 796479 CACATGG s panTro4.chr19 59102553 7 + 63644993 CACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980288 7 + 60714840 CACATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750270 7 - 106955855 CATATGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039489 7 + 64156825 CACATGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065038 7 + 59248254 CACATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167358 7 + 51301725 caCATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46872931 7 + 50890351 CACATGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19658838 7 - 122678785 CACATGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e calJac3.chr22 45454666 17 + 49145316 I a score=185482.000000 s hg38.chr19_GL949753v2_alt 169868 59 + 796479 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT s panTro4.chr19 59102560 59 + 63644993 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCCATTTCTTCCCCCCATGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980295 59 + 60714840 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCACGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750277 59 - 106955855 TAA-AATTCTGGGGCTGAAAGTCTCCACCTCTAGTTCTTCAATTTCTTCCCCCCATGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039496 59 + 64156825 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065045 59 + 59248254 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47167365 59 + 51301725 TAA-AGTTCTGGGGCTGAAAGTCTCCACTGCTAGTTCTTCAATTTCTTCCCCCCATGTTT i papAnu2.chr19 C 0 M 1926 s chlSab2.chr6 46872938 59 + 50890351 TAA-AGTTCTGGGGCTGAAAGTCTCCACCGCTAGTTGTTCAATTTCTTCCCCCCATGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454683 58 + 49145316 TAG-AATTCTGGGGCTGAAAGTCTTTATTTCTAGTTCTT-AATTTCTTTTCCCTACATAt i calJac3.chr22 I 17 I 30 s canFam3.chr1 19658845 47 - 122678785 TAATGATTCTGGAGCTGAAAGTGTCTATCTCTAGTTTCCCAATGTCT------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I a score=335456.000000 s hg38.chr19_GL949753v2_alt 169927 141 + 796479 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT s panTro4.chr19 59102619 141 + 63644993 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctggaaccggaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTTCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980354 139 + 60714840 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctc--gaaccggaataggtttagagagactccCG---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750336 141 - 106955855 CATTCTTTCTCTTTTTTGcgtgaattgagcagcctctggaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTGTAAGTTTAGATTAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039555 140 + 64156825 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065104 140 + 59248254 CATTCTTTCTCTCTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTTCCCTCTTTCTTGCCATTCCCAGTAAACAGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46872997 140 + 50890351 CATTCTTTCTCTTTTTTGTgtgaattgagcagcctctagaaccagaataggtttagagagactccCA---TCTCCCCTCTTTCTTGCCATTCCCAGTAAACCGAC-TCATAGAATCTCA-ATTTCCTTTAAGTTTAGATTAATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454771 136 + 49145316 TTCTCTCTCTCTCTCTTCTgtgaattgagcggcctctggaatcagaataggttttgagagacttcCA---TCTCCCCACTTTCTTGACATTACCAGTAAACAGACTTCATAGAATCTCA-ATTTCCTAAAGGT-----TTAATTT i calJac3.chr22 I 30 C 0 s canFam3.chr1 19658892 87 - 122678785 ----------------------------------------------------------GGGCTGCCAATTTCTTCTTTCTTTTCTATACTTCTCAGTAAACAAATTTGCTAGAACCTCATATTTCCTGTAAGCTTAGATTAATTT i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=228705.000000 s hg38.chr19_GL949753v2_alt 170068 99 + 796479 AAAATATGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat s panTro4.chr19 59102760 99 + 63644993 AAAATACGACACTGggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980493 99 + 60714840 AATATACGACATTGggctaggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagat-------------gagtttgagatcagcctggccaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750477 112 - 106955855 AAAATACGACACTGggccgggcatggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgatatcagcctggccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039695 112 + 64156825 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065244 112 + 59248254 AAAATATGATACTGggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873137 112 + 50890351 AAATTGTGATACTGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgtggtaggcagatcacctgaggtcaggaatttgagaccagcctggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45454907 112 + 49145316 AAAATACGACACTGggctgggtgtggtggctcccgcctgtaatcctagcactttgggagtctgaggtgggtggatcacctaaggtcaggagtttgacactagcctggccaat i calJac3.chr22 C 0 I 1042 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=445780.000000 s hg38.chr19_GL949753v2_alt 170167 210 + 796479 atggtgaaaccccatctctactaaaaatacaaaaaaaaaaattagccgggcgtggtggcatgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaaaag s panTro4.chr19 59102859 209 + 63644993 atggtgaaaccccatctctactaaaaatac-aaaaaaaaaattagccgggcgtggtggcatgcacctgtactcctagctactcaggagcctaaggcaggagaatcacttgaatccaggaggcagaggttgcagtgagccaagatcgcactactacactccagcctgggcaacaagagctaaact-ccatctc-aaaaaaataaaaagaagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980592 209 + 60714840 atggtgaaaccccctctctactaaaaata--gaaaaaaaaattagccaggcgtggtggcacgcgcctgtactcctagctactcaggagcctaaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaagattgcaccactacactccagcctgggcaacaagagctaaactcccatctc-aaaaaaataaaaagaaaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750589 207 - 106955855 atggtgaaaccccatctctactaaaaata--caaaaaaaaattagccgggtgtggtagcacgtgcctgtactcctagctactcaggaggctaaggcaggagaatcacttgaacccaggaggcagaggttgtactgagccaagatcacactactacactccagcctgggcaacaagagct-aact-ccgtctc-aaaaaaataaaaagaaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60039807 209 + 64156825 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcgcctgaacccaggaggcagaggttgcagtgagcccagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctcaaaaaaaaaaaaaagacaag i rheMac3.chr19 C 0 I 23 s macFas5.chr19 55065356 207 + 59248254 atggtaaaatcccatgtctactaaaaata--caaaaaaaaattagctgggcgtggtggtgcacacctgtactcctagctactcaggagcctaaggcaggagaatcacctgaacccaggaggcagaggttgcagtgagccaagatcgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc--aaaaaaaaaaaagacaag i macFas5.chr19 C 0 I 14 s chlSab2.chr6 46873249 205 + 50890351 atggtaaaatcccatctctactaaaaata--caaaaaaaaattagctgggcatggtggtgcacacctgtactcctagctactcaggagcctaaggccggagaatcacctgaacccaggaggcagaggttgcagtgagccaagattgtgccactgtactccagcctgggcaacaagagctaaact-ccatctc---aaaaaaaaaaagacaa- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456061 205 + 49145316 atggtgaaaccccgtctctactaaaaata--c---aaaaaattagctgggcattgtggcgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgtggtgagccgagattgcgccattgcactccagcctgggtaacaggagcgaaact-ccgtctc-aaaaaaaaaaaaggaaaag i calJac3.chr22 I 1042 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e papAnu2.chr19 47167424 1926 + 51301725 M a score=704.000000 s hg38.chr19_GL949753v2_alt 170377 2 + 796479 aa s panTro4.chr19 59103068 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980801 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750796 1 - 106955855 -a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065577 2 + 59248254 AG i macFas5.chr19 I 14 C 0 s chlSab2.chr6 46873454 1 + 50890351 -g i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19658979 0 - 122678785 C e calJac3.chr22 45456266 0 + 49145316 C e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=1426.000000 s hg38.chr19_GL949753v2_alt 170379 14 + 796479 aaaaaa-TGACGCTA s panTro4.chr19 59103070 14 + 63644993 aaaaaa-TGACGCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980803 14 + 60714840 aaaaaa-TGACGCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750797 14 - 106955855 aaaaaa-TGGCACTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55065579 7 + 59248254 AAAAAAG-------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873455 6 + 50890351 aCAGTA--------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456266 6 + 49145316 ---------aCACTA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658979 14 - 122678785 AAAACA-GGACACTA i canFam3.chr1 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040016 23 + 64156825 I a score=398898.000000 s hg38.chr19_GL949753v2_alt 170393 152 + 796479 ACCCCTGTCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTCCCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT s panTro4.chr19 59103084 155 + 63644993 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTGCTTCATAATTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCTCCTCTGAAAAGTTCCTCATTTAAAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980817 155 + 60714840 ACCCCTGTCTGGCCAATACTCTCTTCTTTATGCCTGCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAACAAAATACTTAGAAGTCTC-------ATTATCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102750811 155 - 106955855 ACCCCTGTCTGGCCAATACTCTCTTCTTTGTGCCTCCTTCATAAGTGGCTTTGTAAGTCTATTCTCCACCCTTTCTCCTCTCTACAATAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCATGAGTCTCCCCTCTGAAAAGTTCCTCATTTAAAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040039 152 + 64156825 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i rheMac3.chr19 I 23 C 0 s macFas5.chr19 55065586 152 + 59248254 ACCCCTGCCTGGCCAATACTC---TCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTGTCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCAGGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873461 155 + 50890351 ACCCCTGCCTGGACAATACTCTCTTCTTTGTGCCTGCTTCATAAGTGGCTTTGTATGTCTATTCTCCACCCTTTCTCCTATCTACAACAAAGTACTTAGAAGTCTC-------ATTACCTCTGTCACGAGTCTCCGCTCTGAAATGTTCCTCATTTAAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456272 151 + 49145316 ACCTCTGTCTGGCCAAGACTA--ATCTTTGTGCCTGTTTGATAAGCGGC-TTGTAAGTCTATGCTCTACCCTTTCTCCTCTCTACAAC-AAGTAATTAGATGTCTC-------AGTACCTCTGTCATGAGCCTCTCCTCTGAAAAGTTTCTCATTCAAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19658993 159 - 122678785 ATCCCTGCCTCATTAACACTCTGTTCTTTGTGCCTCTTTGATAACTGGC-TTGCAAATCTATTCTCCAGGCTCTCTCTTCTCTACAACAAAGTACTTAGTTGACTCAGTACTGAGTACCTCTGTCTTGAGTCTTCCCTC--AAAAATTCCTCATTAAAAACT i canFam3.chr1 C 0 I 64854 e mm10.chr7 3701197 2697 + 145441459 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=820469.000000 s hg38.chr19_GL949753v2_alt 170545 383 + 796479 CCTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagtttgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaacaaaAAAAAACTTTTGTGACTGGTGTccccccatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagttaggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatattgatagcttcctaactcatcccctgccttccattcttgcccctctgttgtctgttttcaacagagcagccagaat s panTro4.chr19 59103239 379 + 63644993 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagccgctgagctcaggagttcgagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaacaaacaaac----aaaCACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctgtaggtgccgtgttcaaagcactgtggatcca-cagtttcgcccc-accctccaccttcactgccagtatcttacaaaaaccaaaccatggctcgtttgatattgatagctttctaactcatcccctgccttccattcttgcccctctattgtctgttttcaacagagcagccagaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55980972 382 + 60714840 CTTGTggccagatgtggtggctcagacctgtaatcctagcactttgggaggccaaggtgggaagatcagttgagcagttgagctcaggagttcgagaccagccttggctgaacatagtgagacttcatctcatctctatttaaaaacaaaaaaac--aaAAAAACTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttgatcttgatagcttcctaactgatcccctgccttctattcttgcccctctattgtctgttttcaacagagcagccagaat i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102750966 381 - 106955855 CTTGTggccagatgtggtggctcagacctataatcctagcactttgggaggccaaggtgggaagatcagttgagcaggtgagctcaggagttagagaccagccttggctgaacatagtgagacctcatctcatctctattt-aaaaaaaaaaaaa--aaaAAAAAGTTTGTGACTGGTGaccccacatattgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactgccagtatcttagaaaaaccaaaccatggctcatttggtcttgatagcttcctaactcatcccctgccttctattcttgcccctctattgtttgttttcaacagagcagccagaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040191 366 + 64156825 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55065738 366 + 59248254 CTTGTggctgggtgtggtggctcagacctataatcctagcagtttgggaggccaaggtgggaagatcagt--------tgagctcaggagtttgagaccagcctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaaCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatcca-cagtttggcccc-accctccaccttcactaccagcatcttagaaaaaccgaaccatggctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtctgttttcaacagagcagccagaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873616 367 + 50890351 CTTGTggctgggtgtggtggctcagacctgtaatcctagcactttgggaggccgaggtgggaagatcagt--------tgagctcaggagtttgagaccaccctgggctgaacatagtgagacctcgtctcgtctctattt-aa-------aaac--aaaaaaGCTTTTGTGACTGGTGTccccacatgttgtcagtcaacaaattctataggtgccatgttcaaagcactgtggatccaccagtttggccct-accctccaccttcactgccagcatcttagaaaaaccgagccatagctcatttgatcttgatagcttcctaactcatgccctgcctgctattcttgcccctctattgtgtgttttcaacagagcagccagaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45456423 347 + 49145316 TTTGTggctgggtgtggtggctcaggcctgtaatcctagcactttgggaggccagggtgggaagatcagt--------tgagctcaggagttcgacaccagcctgagctgaacatagtgagac-----ctcgcctctattt-aa----aaaaaaa--aagaaaACTTTTGTGACTGATGTTTc--catgtcatcagtcaacaaattctgtaggtgccatgttct-----------------aagtttggcccctgccctccaccttcactggcagcatcttagaaaaaccaaaccattgctcatttgatcctaatagtgtcctaactcatcccctgccttctagccttgcccctctgttgactgttttcaacagagcagccagaat i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=8022.000000 s hg38.chr19_GL949753v2_alt 170928 4 + 796479 catc s panTro4.chr19 59103618 4 + 63644993 catc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102751347 4 - 106955855 catc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60040557 4 + 64156825 catc i rheMac3.chr19 C 0 I 527 s macFas5.chr19 55066104 4 + 59248254 catc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46873983 4 + 50890351 catc i chlSab2.chr6 C 0 I 535 s calJac3.chr22 45456770 4 + 49145316 catc i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=1508.000000 s hg38.chr19_GL949753v2_alt 170932 5 + 796479 gtttt s nomLeu3.chr10 102751351 5 - 106955855 atttt i nomLeu3.chr10 C 0 I 3534 s macFas5.chr19 55066108 5 + 59248254 atatt i macFas5.chr19 C 0 I 522 s calJac3.chr22 45456774 5 + 49145316 atatt i calJac3.chr22 C 0 I 1137 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e rheMac3.chr19 60040561 527 + 64156825 I e panTro4.chr19 59103622 0 + 63644993 C a score=28885.000000 s hg38.chr19_GL949753v2_alt 170937 319 + 796479 tttttttgtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccctagtagccgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc s panTro4.chr19 59103622 312 + 63644993 -------gtttttttttttttttttttttttgaggcggagtctcgctgtcgcccaggctggagtgcagtggcatgatctctgctcactgcaggctccgccccccgggttcacgccattctcctgcctcagcctccctagtagctgggactacaggcgcccgccacctcacctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccagaatcatc i panTro4.chr19 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e ponAbe2.chr19 55981354 1 + 60714840 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=175752.000000 s hg38.chr19_GL949753v2_alt 171256 664 + 796479 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccatctcagagtaaaactcaaaggtcctactttgcagcttcctcatgaactggccATGTGCATtctcttccttgcttattattattattattatttattttttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcccggccagctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcatcaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTTGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacac----agcagtcaatacattgttgctaaataa s panTro4.chr19 59103934 665 + 63644993 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttgctggagttttccatctcaaagtaaaactcaaaggttccactttgcagcttcctcatgaactggccATGTGCATTCTCTTCCTTGCttattattattattattat---tattttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcggcccactgcagcctctgcctcctgggttcaagtgggttcaagcgattctcccacctcagcctcccaagtatctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacggggtttcgccataattgcccaggctcgaactcctgagctcaggcaatccgcccacctcagcctcccaaagtgctaggattatagacatgagccaccgtgcctggccAGctttgttcctctttactgctggatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTTCTTTTTGttttatttacccctgttcatgcagtatccccaggtccaagaacagttcctggcacacagtaagcagtcaatacattgttgctaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55981355 657 + 60714840 atattaaaagataagtcagaccatgtcacagctctgtctaaaactttcctggagttttccgtctc--agtaaaactc--aggtccCACTTTGCAGCTTCCTCATGAACTGGCCATGTGCATCCTCTTCCTTGCttattattattatttttat-------ttttatttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagcccactgcagcctctgcctcctgggttcaagtggattcaagcgattctcccacctcagcctcccaagtacctgggattacaggcgcctgccaccacgtcaggctaattttttgtattttagtagagacagggtttcaccataattgcccaggctcgaactcctgagctcaggcaatccacccacctcagcctcccaaagtgctaggattataggcatgagccaccatgcccggccAGctttgttcctctttactgctgaatattccattgtatggacataaccccattttatttatccattcaccaggtgattggcatttgtttctagttaaggacAAGGTTTTGGTTTTGGTTTTGGttttatttacccttgttcatgcagtatccccaggtccaagaacagttcctggcacatagtaagcagtcaatacattattgctaaataa i ponAbe2.chr19 I 1 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45456779 1137 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=368666.000000 s hg38.chr19_GL949753v2_alt 171920 773 + 796479 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCATATTTTAAATAAATATACATACGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCTGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagttgacccttgagcaacatgggtctgaactgctcgggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttttacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttctttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt s panTro4.chr19 59104599 772 + 63644993 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACATGACTTTCTAAGCatattttaaataaatatatataCGTTAAGGTCATTTTTATTAATGAAAATTGTAGCATACTATGCACACTTCTGCATCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCATAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCATGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGAGCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTCATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAGAAGTAaaggttacacagagcatgcctgcctctcctgctttgccttgtacctcctccacctctggcaccctgagacagcaagaccaaaccctcctcttccttctgcacctctgcctactcagaatgaagacaaggatgaagacctttatgatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttc-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982012 773 + 60714840 atgagtGGCTTAAACTATAATTTTTAAATCAG----GGCTGAGACAATTTGGAAATTATAATTTCTCC---TACACGACTTTCTAAGCATATTTTAGATAAATATACATACGTTAAGGTCATTTTTATTAATGCAAATTGTAGCATACTATGCACACTTCTGCAGCTTGCTTATTGGATATGCCCAGGCTTGTCTCATTTTTGCCAACAGCTACATGGTTTTGCGTCCTATGGATGGGGCGTAATTAGATTTTATTACACTTGTACAAAAG----GAAAGGAATTCAGCTCCCCAAGCATGCCCAGCTGGTCCTTGGCAACCCATGATGGAAACCAAGGGTTCCTCTTATATTACCCGTGCTCCTTTCAGAGAGGAAGGGCTAGAGGGCTCCAGCCTGAGTGAGAGAGAGAGAGGAGGAAGCATGAGGGGTTTGTGGAAGAGGGCCCGGTGCCATATGACTGGACCATGCTTCTGAAGAGGATCAGGGTGAGGCCAGATCTTATcagctgacccttgagcaacatgggtctgaactgctcaggtccacttttatgcagattGAAAAAAGTAaaggttacacagagcatgcatacctctcctgctttgccttttacctgctccacctctggcaccctgagacagcaagatccaaccctcctcttccttctccacctctgcctactcagaatgaagacaagaatgaagacctttaggatgatccacttccacttaatgaatagtaaatatatt--ttctcttttttagaattttcttaatattttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45457916 759 + 49145316 ATGAGTGGTTTAAACTATCATTTTTAAATCAAGGCTGGCTGAGACAACTTGGAAATTATAATTTCCCCTAATATACGACTTTCTAAGCATATTTTTAATATGCATTTATG----------ATTTTTATTAATGCAAATTGTAGCATACTATACACAC-TCAGCAGCTTGCTTTTTTGATATGCCCAGGCTTGCTTCATTTTTGCAAACAGCTACATGCTTTTGCGTCCTACAGATGGGGCATAATTAGATTGTATTACACTTGTACAAAAGAAAAGAAAGGAATTCAGCTCCCCAAGCATGCCCAACTGGTCCCTGGCAACCCATGATGGAAACCAAGGGTTCCTTTTATATTACCTGTGTGCCTTTCAGAGCAGAAGGGCCAGAGGGCTCCAGGCTGAGTGAAAG-------GGAGGAAGCATGAGGGGTTTGTGGAAGAGGGGCCAGTGCCCTGTGATTGGACCATGCTTCTGAAGAGGATCAAGGTGAGGCCCAGTCTCATcagctgacccttgagcaacatgagtctgaactgctcagctccacttac-tgcagatttAAAGAAGTAaaggtcacac--agcatgcctacctctcctgctttgccttttaccccctccacctctgccaccttgaggcagcaagaccaatccctcctcctcct------cctctgtctactcagcatgaggacaaggatgaagacctttataatgatctgcttcctcttaatgaatagtaaatggattcatgtcttttctcaaagttttcttaatattttatt i calJac3.chr22 I 1137 I 429 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=562914.000000 s hg38.chr19_GL949753v2_alt 172693 1483 + 796479 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccggtagctgggactacaggtgcctgccaccacgcccggcaaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctggggtaacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatgttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcgctgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacaccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccacctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttcttgatttttttttttttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggccttggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttctttt-ttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaacctacaggttcaaccaccattataAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT s panTro4.chr19 59105371 1482 + 63644993 ttt----------tttttttttttgagacgaagtctcgctctgtcacccaagctggagtgcagtggcgcgatcttagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctccccagtagttgggactacaggcgcctgccaccacgcccggctaattttttgtatgtttagtagagatggggtttcaccatgttagccaggatggtctcgatctcct--gacctggtgatccgcccgccttagcctcccaaagtgctgggattacaggcatgag--ccatcacgcccggccaatattttcttttctctagcttaattcatcataggaatacagaatataatacatatagcgtataaaatatgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaattttttttttaa------atcctgagacagtgtcttgctctgccagctgggctggggtgcaggggcatgatcttagttcactgctgcctcaacctccttgactcaagcagtcctcccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagtta--------atttttctgttttctgtagagtctgggttttgc-cgtgttgccctggctgg-------------------------------tcttgaactcctgggctcaagtgctctgcccatctcagcttcccaaatcccacctggggttacaggtgtgagccacggtgcctggcctagtagttaagttttggggaagtcaaaagttatatgcagattttctttctt--tctttctttctttttttttgaggcagtcttgctctgtcgcccaggatggagtgcagtggtgcgatctcggctcactgcaatctccacgtcctgggttcaagcgatgctcttgcctcaacctcctaagtagctgggattacaggcacctgccaccacgcct-gcctaatttttgtatttttagtagagaccaggttttgtcatgttggccaggctggtctcgaactcctgacctcagttgatccgccggcctcggccttccacatagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaagactctgtgctggttttcttttcttttcttttttttttttactctaaatcatcaaaccctatgaggaaagtcctgttactttctcccatttagcactcttgaagaggctaatttgcctaagatcaagagctcgtcagtgactgctgaggttcaaacgcagatcttttttaagacttgagaacctacaggttcaaccaccattataAAACCATCTCTGTAATCACCAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTATGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55982785 1476 + 60714840 tttgttttttttgtttttttttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgcaatctcagctcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcagtctcct--gacctggtgatcagcccgccttagcctcccaaagtgctgggattacaggcatgag--ccactatgcccggccagtattttcttttctctagcttaattcatcataggaatacagaatataatatatacagcgtacaaaatgtgtgttaattgactatgttattggtaaggcttccagtcaactacgagtaatttttttttttattttttatcttgagacggtgtcttgctctgccagctgggctggggtgcaggggcattatcttagttcactgccgcctcaacctccttgactcaagcaatccttccaccacagcctcccaagtagctggaactacgggcacacgccaccacacccagcta--------atttttctgttttctgtagagtctgggtttcgc-catgttgcccaggctgg-------------------------------tcttgaactcctgggctcaagtgctct----------gcttcccaaatcccacctggggttacaggtgtgagccatggtgcctggcctagtagttaagttttggggaagtcaaaagttttatgcagattttctt------ttcttttttttttttttttgaggcagccttgctctgtcgcccaggatggagtgcagtggtacgatctcggctcactgcaacctccacgtcctgggttcaagcgatgctcttgcctcaacctcctgagtagctgggatttcaggtgcttgccaccatgcct-gcctaatttttgtatttttagtagagaccgggttttgccatgttggccaggctggtctcgaactcctgacctcagttgatctgccggccttggccgtccacaaagtgctgggattacaggcgtgaggcaccgcgcccagcctatatggaggttttcggctgagctgggggtcagtgcccctcgcccccagactgtaca-gagtcagctgTGTTAAGAtattaagcaccttcagtacacaaggctctgggctggttttttt--------tttttttttttacttctaaatcatcaaaccctatgaggaagctcctgttgctttctcccatttagcactcttgaagaggctaatctgcctaagatcaagagctcgtcagtgacagctgaggttaaaacgcagatcttttttaagacttgagaaccTACAGGTTCAATCACCATTATAAAACCATCTCTGTAATCACGAGGCACCCGGAATTTGTGGAGCTTGGACTTCATCCTGAAGGGAGTGAAAACTTACGGA--AGTTTTTTCCTTCCACGTTTCCCCCTTCCAGAT i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45459104 1346 + 49145316 ttt----------tttttctctctgagacagtgcctcgctctgccacctgggctggggtgcagtggcataatcttggttcactgcagcctcaacctctttggctcaagcagtcttcccacttcagcctcccaagtagctggaactatgggcgcatggcaccacatccagctaatttttc-tgttttctgtagagatgcggttttgccatgttgcccaggctggtctctaatttctaggttcaagtgatctacccacctcagcttcacaaagtgctgggatttcaggtgtgaaatccaccattcctggcc----------------------------------------------tagta---------------------gttaa--------gtt-ttggggaagtcaaaagttacatgcagattttcttttttgtcg------ttgttgaggaa--gtcttgctctgtcacccaggctggagtgcagtggcatgatcttggctcaccgcaacttctgcctcgcgggttcaactgattctcctgtctcagtctcctgagtagctgggattaccggcgcctgcctccatgcctggctaattcttgtattttttttcttttttttgagacggacttttgctcttattacccagactggagtgcaatggtgcgatctaggctcaccacaatctccgccttctgggttcaggcaattctcctgcctcagcctcccgagt---agctgggactacaggcacacaccaccatgcccagctaa---------------------------------------------------tttttatatttttagtagagacggggtttcaccatgttgaccaggatgg-------------------------------tcttgatctcttgacctc--gtgatctacccgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcacccggcctgatttttgtatttttagtagagacggggtcttaccatgttggtcaggctgttctggaactcctgacctcatttgatttgcctgcctcggcctcctacaaagtgctgagattacaggtgtgagccacctcgcccggcctatatggaggttttcagctgagctggagatcaatgctcccagccccctcattggacaggagtcagctg--------GAGGAagcaccttcagtgtgcagggctctggtctgcttttcttttct----ttctttttttttactctaaatcatcaaaccctgtgaggaaagtcctgttacatgctcccacttagcactcttgaagaggctaatttgcctaagattaagagctggccagtgacagctgaggttcaaacaca----tttttt--gacttgagaacctacaggcttagccaccattataAAACCATCTC--TAATCATGAGGCACCTGGAATGTGTGGCGCTTGGACTTCATCCTGAAGGGAGTGAAAAGTTATGGAAGAGTTTTTTCCTCTCATGTTTTCCCCTTCCTGAT i calJac3.chr22 I 429 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e chlSab2.chr6 46873987 535 + 50890351 I e papAnu2.chr19 47167424 1926 + 51301725 M e macFas5.chr19 55066113 522 + 59248254 I e rheMac3.chr19 60040561 527 + 64156825 I a score=94504.000000 s hg38.chr19_GL949753v2_alt 174176 57 + 796479 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg s panTro4.chr19 59106853 57 + 63644993 GAATAATAT-ACGCGTGTTCAAGATACAAAAATGCATAAAATTTggccaggcatggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984261 57 + 60714840 GAGTAATAT-ACGCGTGTTCAAGATATAAAAATGCATAAAATTTggccgggcatggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041088 57 + 64156825 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i rheMac3.chr19 I 527 C 0 s macFas5.chr19 55066635 57 + 59248254 gaataatat-ACGCATGTTCAGGATACAAAAATATATAAAATTTggccgggcatggtg i macFas5.chr19 I 522 C 0 s chlSab2.chr6 46874522 57 + 50890351 gaataatat-ACGCGTGTTCAAGATACaaaaatgcgtaaaatttggccgggcatggtg i chlSab2.chr6 I 535 C 0 s calJac3.chr22 45460450 58 + 49145316 GAAAAATGTAAAGCGTGTTCAAGATAAAAAAATGCATAAAATTTGGCCGGGCTCAGTG i calJac3.chr22 C 0 I 15 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=743525.000000 s hg38.chr19_GL949753v2_alt 174233 605 + 796479 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgc----cactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcgctaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAggtcaggcgcggtgg s panTro4.chr19 59106910 609 + 63644993 gcttacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaacaacaaaacaaaCAAACAAAAAACCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGATGGTAGCTACCactaggcgctttatttatgccagacactctcctcaacactggatagactctcacttaatcctcac----aagcttatgaggtaggcactaccatcattcgccgttttacagaggaggacgctgaggcacagagtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGGCGGGTGGGACTGCTTCCTGAGGAGATAGTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatataaaaagagaactctAGGTCACgcgcggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984318 596 + 60714840 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagcccaggagttcaagaccagcctgggcaatatggcaaaaccccgtctcaaaataaca----aaacaaaCAAAAAACCCTTAAAACTGAACAAGGTAGTTTGTAAGATATGGAAATACAATGCAGATGGCGATAATGACGatggtagctaacactaggccc----tttatgccagaca--ctcctaaacactggatagactctcacttaatcctcac----aagcttatgaggtgggcactaccatcattccccgttttacagaggaggacgctgaggcac--agtgattgagaaacttgtcgaaggcactgcagctggcaagtggtgacgtggcatttgaatccaggcatccggATGGTGTGGATGCCGTGGAAGAGAAAGGGACGGGTGGGACTGC-TCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGACAACTGAAGAACACGAGCT---GTGGAGACAGACCATCGCATTCGGAGTGgagagatgggtgtacagacagacaataaccagactatatacaaaaagagaactctAggtcaggcgcggtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041145 602 + 64156825 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaacatggcaaaaccccatttcaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGA-TGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGAtgggtatgcaagcggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55066692 599 + 59248254 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcccgggcaacatggcaaaaccccgtctca------------aaataaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacgccagacactttcctaaacactggatagactctcacttaagcctcacaaataagcctctgaggtaggcactaccatccttccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACAGCTTCCTGAGGGGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCT---GTGGAGACAGATCATCGCATCCGGTGTGGACAGATGGGTATGCAAGCAGACAATAACCAGACTATATATAAAAAGAGAA--CTAggtcaggctcggtgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46874579 602 + 50890351 gctcacacctgtaatcccagcacttggggaggctgaggcgagtggatcacttgagtccaggagttcaagaccagcctgggcaatatggcaaaaccccgtcttaaaac--------aaacaaaacaaaaCCCCATAAAACTGAACAAGGTAGTTTGTAAGATATGGAAGTACAATGCAGATGACAATAATGACGatgatagctaacactaggcgctttatttacactagacactttcctaaacactggacagactctc----aatcctcacaaataagcctatgaggtaggcactaccatcattccccgttttacagaggaggacgctgaggcacagattgattgagaaacttgtcgaaggcactgcaactagcaagtggtgacatggcgtttgaatccaggcaTCCGAATGGTGTGGATGCGGTGGAAGAGAAAGGGGTGGGTAGGACTGCTTCCTGAGGAGATACTGACTGCCGAGGCAGCAGCGTAGGGAAGAGAACTGAAGAACAGGAGCTATGGTGGAGACAGACCATTGCATCCGGTGTGGACAGAtgggtacacaaacggacaataaccagactatatataaaaagagaa--ctAggtcaggcgcggtgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e calJac3.chr22 45460508 15 + 49145316 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=74016.000000 s hg38.chr19_GL949753v2_alt 174838 43 + 796479 ctcacacctgtaatcttagcactttgggaggctgaggcgggtg s panTro4.chr19 59107519 43 + 63644993 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984914 43 + 60714840 ctcacacctgtaatcctagcactttgggaggctgaggcgggtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041747 43 + 64156825 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067291 43 + 59248254 ttcacacctgtaatcccagcactttaggaggctgaggcgggtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46875181 43 + 50890351 ttcacacctgtaatcccagcactttaggaggctgaggtgggtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460523 40 + 49145316 ctcacacctgtaatccctgcactttgggaggccgaggcgg--- i calJac3.chr22 I 15 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I e papAnu2.chr19 47167424 1926 + 51301725 M a score=474825.000000 s hg38.chr19_GL949753v2_alt 174881 227 + 796479 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatttaaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacgagagcgaaaaactccgtctcaaaaataaa s panTro4.chr19 59107562 227 + 63644993 gatcacttgaggtcaggcgttggagaccaggagttcaaaaccccgtctctac-taaaaatataaaaattagccgggcatggtggtgggcgcctgtagtcccagcttctcgggaggctgaggcacgagaatcgattgaacccgggaagcggaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcgaaaaactccgtctcaaaaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55984957 219 + 60714840 gatcacttgaagtcaggcgtttgagaccaggagttcaaaaccccgtctct-------aatataaaaattagctgggcatggtggtgggcacctgtagtcccagcttctggggaggctgaggcacgagaatcgattcaacctgggaagccgaggttgcagtgagccgagatcgcac-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60041790 217 + 64156825 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaaccggggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55067334 217 + 59248254 gatcacctgaagtcaggcgtttgagaccgggcgttcgaaaccccgtctctac-taaaaacataaaaattagccgggcatggtggtgggcgcctgtagtcccagctactcgg--------ggcacgagaaccgattgaacccgggaagcagaggttgcaatgagccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccatctcaaaaataaa i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47169350 218 + 51301725 gatcacttgaagtcaggcgtttgagaccggGCGttcgaaaccccgtctctacttaaaaacataaaaattagccgggcatggtggtgggcgcctgtagtgccagctactcgg--------ggcacgagaatcgattgaacccgggaagcagagcttgcagtgagccgagatcgcgc-cactgcactccagcctgggtgacaagaggg--aaactccgtctcaaaaataaa i papAnu2.chr19 M 1926 I 5 s chlSab2.chr6 46875224 217 + 50890351 gatcacttgaagtcaggagtttgagaccgggcattcgaaaccctgtctctac-taaaaacataaaaattagccgggcatggtggtgggcacctgtagtcccagctactcgg--------ggcacgagaatctattgaacccgggaagcagaggttgcagtgaaccgagatcgcgc-cactgcactccagcctgggtgacaagagcg--aaactccgtctcaaaaataaa i chlSab2.chr6 C 0 T 10752 s calJac3.chr22 45460563 223 + 49145316 -atcacttgaggtctggagtttgagaccaggagttcgaaaccccgtttctac-taaaaatacaaaaattagcctggcatggtggtgggcgcccatagtcctagttactcgtgaggctgaggcatgaaagtcgattgaaccagggagtcgaaggctgcggtgagctgtgatctcgcgcactgtactccagcctgggtgac--gagtg--aaactccatttcaaaaataaa i calJac3.chr22 C 0 I 5 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=28651.000000 s hg38.chr19_GL949753v2_alt 175108 12 + 796479 ataaaTTACTGA s panTro4.chr19 59107789 12 + 63644993 ataaaTTACTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985176 12 + 60714840 ataaaTTACTGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60042012 12 + 64156825 ataaaTTACTGA i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55067556 12 + 59248254 ataaaTTACTGA i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47169573 12 + 51301725 ataaattagtga i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 46864689 12 + 50890351 aTAAATTACTGA i chlSab2.chr6 T 10752 C 0 s calJac3.chr22 45460791 12 + 49145316 gtaaaTTACTGA i calJac3.chr22 I 5 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I e nomLeu3.chr10 102751356 3534 - 106955855 I a score=1504910.000000 s hg38.chr19_GL949753v2_alt 175120 560 + 796479 TAATAGTACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT---GGGTGGGGGGGCAACTTCTCTGAGAGtgctctg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccgggagttcaagaccagcctgggcaacatggcaagacgccgactgtt----a---aaaaaaaaaaaatgctacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggcctcagtgagccgaaatcacgccactgcactccagcctgggcgacggagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT s panTro4.chr19 59107801 565 + 63644993 TAATAATACTAATACCCCTTAAGTGGCTAT-TGATAATAATAGTACCAT--GGGGGGGGGGGGCAACTGCTCTGAGAGtgctctg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacat----agcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt--gggggggccacggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgttaaaaa---aaaaaaaaaaaaagctacccgggcgtcg---tggcgtgtgcatgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggccgcagtgagccgaaatcacaccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaaaaga-aaaaCCACCGTCCAGGGGCGGAGAAGGAAGGTTCTCCCTACTTCTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985188 559 + 60714840 TAATAGTATTAATACCCCTTAAGTGGGTAT-TG---GTAATAGTACCGT--GGGGCGGGGGGCCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttacaacagtaggtggcacatagaaagcgttccagaatgccacattattgttAGTGACAGAAATAATCTCggctgggcgcggtggctcacgtctgtaatcccagcacttt---ggggggccaaggcgggaggctctctcgaggccaggagttcaagaccagcctgggcaacatggcaagacgccgactgtt---------aaaaaaaaaaatgttacccgggcgtcg---tagcgtgtgcctgtaattccagctactggggaggaggtgggacgatcgctcgagcccgagaggttggtcggggctgcagtaagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAAGGGCGGAGAAGGAAGGTTCTCCCTGCTTCTCAGGTTTCCACTCCTTGGCCGGAAAAAGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102754890 553 - 106955855 TAATAGTATTCATACCCTTTAAGTGGGTAT-TG---GTAATAGTACCAT-GGGGGGGGGGGGGCAACTTCTCTGAGAGtgctccg-----taagtatgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccagaatgccacattattgttAGTGAC--AAATAATCTCggctgggcgcggtggctcatgcctgtaatcccagcacttt---ggggggccacggcgggaggctctctcgaggccaggagttcaaggacagcctgggaaacatggcaagacgccgactgtt-----------aaaaaaaaaagttacccgggcgtcg---tggcgtgtgcctgtaatcccagctactggggaggaggtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagccgaaatcacgccactgcactccagcctgggcgacagagcgagaccctg--tctcagaaagaaagaga-aaaaCCACCGTCCAGCGGCGGAGAAGGAAGGTTCTCCCTA---CTCAGGTTTCCACTCCCTGGCCGGAAAAAACCT i nomLeu3.chr10 I 3534 C 0 s rheMac3.chr19 60042024 561 + 64156825 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCCT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacca-----aaaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcccatctactggggaggaggtgggaggatcgctcaagcccgagaggttggtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTATTCCTTGCCCGGAAGAAACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55067568 548 + 59248254 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGtgctcca-----taagtatgtattgaagattgagtaaatacttttaaaattcttagaacagtatgtggcacatagaaagcgttccataaTGCCACATTATTGTCAGTGACAGAAATAACCTCggctgggcgcggtggctcacgcctgtaattccagcacttt---ggggggccaaggtgggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgccgattgtacc------aaaaaaaaaaaaagttacccgggc-ttg---tggcgtgtgcttgtaatcccagctactggggaggaggtgggaggatcgctcaagcc------------cggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctgattctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCTACTCCTTGCCCGGAAGAAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47169585 552 + 51301725 taATAGTACTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA-----TAAGTATGTATTGAAGATTGAGTAAGTACATTTAAAATTCTTAGAACAGTATGTGGCACATAGAAAGCGTTCCATAATGCCACATTATTGTCAGTGACAGAAATAacctcggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaggcaggaggctctcgcgaggccaggagttcaagaccagactgggcaacatggcaagacgcCGActgtaccaaaaagaaaaaaaaaaaaagttacccgGGC-TCG---TGGCgtgtacttgtaatcccagctactggggaggaggtgggaggatcgctcaagCCCGAGAGGTTGGTCGGGGcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aataccaCCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTC------------TCCTTGCACGGAAGAAACCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46864701 557 + 50890351 TAATAGTATTAATACTCCTTAAGTGGGTAT-TG---ATAATAGTACCAT-----GGGGGAGGGCAACTTCTCCGAGAGTGCTCCA---------TAtgtattgaagattgagtaaatacatttaaaattcttagaacagtatgtggcacatagaaagcgttccataatgccacattattgtCAGTGACAGAAATAATCTCggctgggcgcggtggctcacgcctgtaatcccagcacttt---ggggggccaaagcgggaggctctctcgaggccaggagttcaagaccagactgggcaacatggcaagacgctgactgtaccaaa---agaaaaaaaaaaagttacccgggc-tcg---tggcgtgtgcttgtaatcacagctactggggaggaggtgggaggatcgctcaagccggagaggttcgtcggggcagcagtgaaccgagatcacaacactgcactccagcttgggctacagagcgagaccctg--tctcagaaagaaagaga-aaTACCACCGTCCAGGGACGGAGAAGGATGATTCTCCCCGCTTCTCAGGTTTCCACTCCTTGCACAGAAGAAACCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45460803 564 + 49145316 TAATGCTATTAATATTTCTTAAGCGAGAATCTC---ATAATAGTACCCTTTGGTGAGGGGGGGCACCTTCTCTGAAAGTGCTCCGTAACATAAGTATATACTGAGGATTGAGTAAATCCATTTAAAATTCTT-----AGTATGTGTCACAC----AGCGTTCCAGAATGCCACATGATTGTTCGTGACAGAAATAATCTCggctgggcgcggtggcacacgcctgtgatctcagcactttggggggggaccaaggcggaaggacctctcgaggccaggagttcgagaccagcctggacaacgtagcaagacgccgactgt---------acaggaaaaaaaagttacccgcgc-gcgcgctggcgtgtacctttaatcccatctactccggaggaagtgggaggatcgctcgagcccgagaggttggtcggggctgcagtgagcagagatcatgcaactgcaccccggcttgggcgacagagggagaccttg--tctcaaaaagcaaaagaggaaaCCACAGTCCAGGGATGGAGAAGGAAGGTTCTCCGCACTTGTCAAGTTTCCACTCCTTAGCCGGAAGAAAGCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3701197 2697 + 145441459 I e canFam3.chr1 19659152 64854 - 122678785 I a score=48771.000000 s hg38.chr19_GL949753v2_alt 175680 15 + 796479 AGTCCTCCCAGGTTA s panTro4.chr19 59108366 15 + 63644993 AGTCCTCCCAGGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985747 15 + 60714840 AGTCCTCCCAGGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102755443 15 - 106955855 AGTCCTCCCAGGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042585 15 + 64156825 AGTCCTCCGAGGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068116 15 + 59248254 AGTCCTCCCAGGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170137 15 + 51301725 AGTCCTCCCAGGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865258 15 + 50890351 AGTCCTCCCAGGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461367 15 + 49145316 AGTCATCCCAGTTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3703894 15 + 145441459 AGTCGGCCCAGCGAA i mm10.chr7 I 2697 C 0 e canFam3.chr1 19659152 64854 - 122678785 I a score=645206.000000 s hg38.chr19_GL949753v2_alt 175695 192 + 796479 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGAAAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGGTGGTTTGCTTA-GGTGAGGTGCGGCGG-TGT s panTro4.chr19 59108381 192 + 63644993 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGACGCCGGCGTTACTATAAGAGCGCAGCCGTGGCGCTTGCGCGCCTCTTTCTCAGTGACCGGCTGGTTTGCTCA-GGTGAGGTGCGGTGG-TGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985762 192 + 60714840 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCGTGGTGCGTGATAACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCGTGTCACTTGCGCGCCTCTTTCTCAGGGACCGGGTTATGCGTTCA-GGTGAGGTGTAGTGG-TGT i ponAbe2.chr19 C 0 I 8 s nomLeu3.chr10 102755458 192 - 106955855 GCACGCCGCTCTAGCCCAGCCTCACGTCTCCACTGCTTCC--CAGCCAGCCAACGCCTCTTCTGATTGGCTCTGACGTGCATGGTGCGTGATAACGTCACGAGGCGCCAGCGTTACTATAAAAGCGCAGCCGTGCCGGTTACGCGCCTCTTTCTCAGCGACCGGGTCTTTCGCTCA-GGTGAGGTGCGGTGG-TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042600 192 + 64156825 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGCCGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGCTCA-GGTGAGATGTGGTGA-TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068131 192 + 59248254 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTGCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGTAGCCTTGTCGGTGGCGCGCCTCTTCGTCAGTGGCCGGCTCTTGCGTTCA-GGTGAGGTGTGGTGA-TGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170152 192 + 51301725 GCACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--CAGCCAGCCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGACGCGCCGGCGTTACTATAAGAGCGTAGCCCGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTGCGCTTA-GGTAAGATGTGGTGA-TGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865273 192 + 50890351 GTACGCCGCTCTAGCCCAGCCTCACGTCTCTACTGCTTCT--TAGCCAGTCAACGCCTCTTCTGATTGGCTCAGACGTGCCTGGTGCGTGATGACGTCACGAGGCGCCGGCGTTACTATAAGAGCGCAGCCTGGTCGCTTGCGCGCCTCTTTGTCAGTGGCCGGGTCTTTCGCTTA-GGTAAGTTGTGGTGA-TGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461382 192 + 49145316 GCACGCCGCTCTAGCCCAGACTCACATCTCGACTGCTTCT--CCGCCAGCCAACGCCTCCTCTGATTGGCTCAGACGTGCGTTGTGCGTGATAAGGTCACGAGGCGCTGGCGTTACTATAAGAGCGCAGCTGTGTCGCGTGCGCGTCTTTTTCTCAGTGTCCGGGCCCCGTACTTA-GGTGAGGTGTGGTGA-TGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3703909 172 + 145441459 G--CGCCGCTCTAGCCGGCCTGCTCGTCTCTATGGCTTTC--CTG-------------CTTCTGATTGGCGTAGTCGCGAGCGGTGCGTGATGACGTCACTACAAGGCGACGTTACTATAAGACCTCGGTCCAACCGCCT-TGTCTCTCTTTGTCTCGGGCCTGA----GTTCGTA-GGTGAG-TGTTCTGATTGT i mm10.chr7 C 0 I 3 s canFam3.chr1 102989285 186 + 122678785 GCTCGTCGCTCTGGCCCAACCTCTCGTCTCGAATGCTTTTTCCCGTCCGCCTACGCCTCTTCTGATTGGTGCAGATGTGCGGCGTGCGCGCTGACGTCACCAGGCCGCGGCGTTGCTATAAAAGCGTGCTCGGG--GGCCGCGTGCTTCTCTTTCTCCGGTCTGG----GAGCTCACGGTAAGGAGTAGTGT---- i canFam3.chr1 n 64854 C 0 a score=28137.000000 s hg38.chr19_GL949753v2_alt 175887 15 + 796479 GCTTTTTCTCTAGGG- s panTro4.chr19 59108573 15 + 63644993 GCTTTTTCTCTAGGG- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102755650 15 - 106955855 GCTTTTTCGCTAGGG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042792 15 + 64156825 ACTTTTTCGCTAGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068323 15 + 59248254 CCTTTTTCGCTAGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170344 15 + 51301725 CCTTTTTCGCTAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46865465 15 + 50890351 GCTTTTTCGTTAGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461574 15 + 49145316 GCTTTGTGGCTAGGG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3704084 15 + 145441459 GTTCGCCTTTTAGGG- i mm10.chr7 I 3 I 1 s canFam3.chr1 102989471 15 + 122678785 -GTTGTGCCCGCGGGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 55985954 8 + 60714840 I a score=1386271.000000 s hg38.chr19_GL949753v2_alt 175902 423 + 796479 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCCGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTTTGG--AGCC-CTTACGCTCACACTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA s panTro4.chr19 59108588 417 + 63644993 -----TTTGGGTTGGATGGTGGCCCGGGCCTTCCGAGTTTCCATGAGTAAGCTAAAGACGTTAGGAAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTGTGGGGGCAGATACTGACTATGAGAGCGTTGGAGGTTATTCTCGCGAGATCGGATCTGGGCTCTGCGAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCTGG--AGCC-CTTACG------CTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55985962 423 + 60714840 -----TTTGGGTTGGATGGTGGCCTGGGCCTTCCGAGTTTCCATGAGTAACCTGAAGACGTTAGGGAACAGAGC-AGGGTGGTTGAACGGGAGTGCAGCACGGTTTTGGGGGCTGATACTGACTGTGAGAGCGTTGGAGGTTATTCTCGCGAGATCCGATCTGGGCGCCGCGAGTTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCTGG--AGCC-CTTACGCTTATGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGGGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGGATGA i ponAbe2.chr19 I 8 C 0 s nomLeu3.chr10 102755665 422 - 106955855 -----TTTGGGCCGGATGGTGGCCTGGGCCTTCCGAGGTTCCATGAGTAAGCTAAAGACGTTAGGGGTGAGAGC-AGGGTGGTTGAACGGGAGTGCGGCACGGTTGTGGGGGCGGATACTGACTATGAGACCATTGGAGGTTATTCTCGCGAGATTCTATCTGGACGCCGCGAGGTTTTGGCGTAGTTTTGGGACTGCGCAGGCGCTGCTTGG--GGCT-CTTA-ACTCACGCTTCTCTCCCGCGCAGGCGCAGACGGGGAAGCGG----AGCCAATATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCCGAGAAGTGGTTCGGCTTCCG---GGAGGCGGTTAGCACGTGAATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60042807 426 + 64156825 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGAGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55068338 426 + 59248254 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACAGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGTCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTTTGGGAAGTGGTGCGGCTTCCGGGAGGAGGCGGGTAGCACGTGGATGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47170359 426 + 51301725 -----TTTGGGTTGGATGGTCACGCGGGCCTTCCAAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTACAACACGGTAGTGGGGGAGGATACTGGCGGTGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAGTCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGGCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTACGTGACCCCGCGGAGGCCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCGGGAGGAGGCGGGTAACACGTGAATGa i papAnu2.chr19 C 0 M 1331 s chlSab2.chr6 46865480 423 + 50890351 -----TTTGGGTTGGATGGTCGCGCGGGCCTTCCGAGCTTCCATGAGTAAGCTAAAGGCGTTAGGGATTGGAGT-AGGGTGGTTGAACGGGAGTGCAGCACGGTAGTGGGGGCGGATACTGGCGATGAGAGCTTTGGAGGTTATTCTCGCGAGATCCAATCCGGGCGCCGCAAGGTTTTGGCGTAGTTGTGGGACTGCGCAGGCGCCGCCCGG--AGCT-CTTAGGCTCACGCTTCCCTCCCGGTCAGGCGCAGACGGGTAAGCGG----AGCCAACATGCCGGTGGCCCGGAGCTGGGTATGTCGCAAAACTTACGTGACCCCGCGGAGACCCTTTGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGGC----TTCTGGGAAGTGGTTCGGCTTCCG---GGAGGCGGGTAACACGTGGATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45461589 409 + 49145316 -----TTTGGGCTGGATGTTCGCGCGGGCCTTCCGAGCTTCCATGAGCAAGCTAAAGACGTTAGGGATCAGAGC-AGGGAGGCTGAATGAGAAAGCAGCACGGTTTTTGGGGCGGATACTGATTATGAAAGCTTTTGAAGTGATTCTCGCGAGATCCAATCTGGGCGCCGCGAAGTTTTGGCGCAGTTGTGGGACTGCGCTGGCGCCACCTAG--AGCC-CTCATTTTCCAACTTTCCTTCCGCGCAGGCGCAGACGGGTAAGCGGAGCCAGCCAGCATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCAAGAGCTGAAGCTGATCGGTGAGTGGCCAAGCC----TTCCGAGAGGCG---------------------GGTTAGCACGTGGATGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704100 406 + 145441459 -----TTGATGGTGTAAGGTAACG-GAGCCATTCGAATCTTCATGAACATGCTGA----GTAAGAGGGTGGGGCGAAGGTGGCTGGAAG---TTACAACACGGTTGTGGAA--CAATCCCATTTTCAAGTTTTCTAAGGCGGATTTCTCTGAGAGCCGAGTTGGTGTCGCCGTGTCCCTAGCGGGGTTTTG---CTGCACATGCGCCACAAGATTATTT-TTTAAAACGACACTTTACT---GCGCAGGCGCAGCCGGCCTAGCGA----GGTCAACATGCCGGTCGCCAGAAGCTGGGTTTGTCGCAAAACCTATGTGACCCCACGGAGACCCTTCGAGAAGTCGCGTCTCGACCAGGAGCTAAAGTTGATTGGTGAGTGGCCAAAGTAGAATTTCGAATTGCGG------ATCCGGGAAGAGTTAGGTAGCC-----ATGA i mm10.chr7 I 1 I 4 s canFam3.chr1 102989486 286 + 122678785 CAGGGGGTGGGTTGCGAGGTCG-----------------------------------------------------GAGACGGTCAGATGAGACTGCAGCGCGGGAGTGTGGG---------------------------------TTCGCTAG-------------------------------------GGGGCCGCGTAGGCGCCGTCCAC--GCCCACACGGGCCCTTCTTGCCCTCCCGCGCAGGCGGACGC------GCGG----AGCCAACATGCCAGTGGCCCGGAGCTGGGTGTGTCGTAAGACTTATGTGACCCCTCGGAGGCCCTTCGAGAAGTCGCGCCTCGACCAGGAACTGAAACTGATCGGTGAGTAGCCTGGAC------CCG------GCTTCCGCTTCCG---GGTGAGGG-------GTGGGCGA i canFam3.chr1 C 0 C 0 a score=207965.000000 s hg38.chr19_GL949753v2_alt 176325 113 + 796479 AGGTGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGATTCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC s panTro4.chr19 59109005 113 + 63644993 AGGCGCCCA-TGTACTCTATCTAGTCCGTCCCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGAATCCAAAGCTGCCAGTCTAGTTGTTGTGCCAGTACGTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986385 113 + 60714840 AGGCGCCCG-CGTGCTCGATCTAGTCCGCCTCCTAAATTTGGTACTAT----TCGTGGTTTAGGAAGGTTTTGTGTATCCAAAACTGCCAGCCTAGTTTTTGTGCCAGTACGTGGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756087 114 - 106955855 ACGCGCCCAGGGTGCTCGATCTAGTCCGCCCCCTAAATTTGGTACTAT----TGGTGGTTTAGGAAGGTTTTGTGTATCCAAAGCTGCCAGCCTGGTTTTTGTGCCGGTACGTGGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043233 113 + 64156825 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55068764 113 + 59248254 AGGCGCCCA-CGTGCTTGATCTAGTCGGCCCCCTAAATTTGGTACTCT----TCGTGGTTTGGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i macFas5.chr19 C 0 I 18 s chlSab2.chr6 46865903 113 + 50890351 AGGCGCCCA-CGTGCTTGATCTAGTCTGCCCCCTAAATTTGGTACTCT----TCGTGGTTTAGGAAGGTTCTGTGTATCCAAAGCTGCCAGGGTAGTTTTTGTACCAGTACGTGGGAC i chlSab2.chr6 C 0 I 10741 s calJac3.chr22 45461998 113 + 49145316 GGGTGCCCA-CGTGCTCGATCCAGTCTGCCCTCTAAATTTGGCACTGT----TCGTGGTGTAGAAAGGTTTTGTTTGTCCAACGTTGCCGGCCTAGTTTTTGTACTAATCTCCGAGAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3704510 93 + 145441459 TGTCTCCCA-CGTGCTCGTTCTGGAGCATCCT----GTGTGGCGCCAGAGGATTGCAGTTTA-----GTTTTGTGTTCTC-------------TAGTCGCCATGC--ACATGTAGTAA i mm10.chr7 I 4 I 5 s canFam3.chr1 102989772 37 + 122678785 -GGCCGCCG-CGTGCTGGCTCTGCGCCACCTGCCGGGCC------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=594972.000000 s hg38.chr19_GL949753v2_alt 176438 164 + 796479 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG s panTro4.chr19 59109118 164 + 63644993 TACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCTCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986498 164 + 60714840 TACACTTG-TTCACCCCTTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGCGTATGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756201 164 - 106955855 CACACTTG-TCCACCCCCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAATAAACGTGAGGTCTGGAGGGTCAAATTTACCTTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTGTGTATGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043364 164 + 64156825 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55068895 164 + 59248254 TACACTTT-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGTACGTATGGG i macFas5.chr19 I 18 C 0 s chlSab2.chr6 46876757 164 + 50890351 TACACTTG-TCCACTCTCTTCTCCCCAC------CAGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGACTGTTCGAAGGTACGTGTGGG i chlSab2.chr6 I 10741 C 0 s calJac3.chr22 45462111 170 + 49145316 TAAACTTG-TCCATCTCCTTCTCCCCACCATATGCAGGCGAGTATGGGCTTCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGAGAGCTGCTGACACTTGACGAGAAGGATCCACGGCGTCTTTTCGAAGGTGCGTATGGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3704608 171 + 145441459 GGCTCTTGCCCCGCGGTCTCCTCCCAACCACGTGCAGGAGAGTATGGACTCCGGAACAAACGTGAGGTTTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGTAAGGCGGCCCGGGAGCTGTTGACGCTAGACGAGAAGGATCCCCGGCGTCTGTTTGAAGGTGTGTATGAG i mm10.chr7 I 5 I 907 s canFam3.chr1 102989809 163 + 122678785 CCCAGCCA-GCCAGCGCCCTGTCTCCG-------CAGGCGAGTACGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAGTTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAGCTGCTGACGCTGGACGAAAAGGACCCGCGGCGCCTGTTCGAAGGTGTGTGTGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47170785 1331 + 51301725 M a score=24664.000000 s hg38.chr19_GL949753v2_alt 176602 9 + 796479 AGTCCACAG s panTro4.chr19 59109282 9 + 63644993 AGTCCACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986662 9 + 60714840 AGTCCACAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756365 9 - 106955855 AGTCCACAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043528 9 + 64156825 AGTCCACAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069059 9 + 59248254 AGTCCACAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876921 9 + 50890351 AATCCACAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462281 9 + 49145316 AGCCCACAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102989972 9 + 122678785 CGTGCACGG i canFam3.chr1 C 0 I 483 e mm10.chr7 3704779 907 + 145441459 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=1072851.000000 s hg38.chr19_GL949753v2_alt 176611 528 + 796479 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAACCAGCCTTCTAAC------TTTTAGTGGCACTTGTGAAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTATTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTAT-----------------ATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTG--TTTTTTTAATTAAGTTTTCTCGttttatttagtcttttgagacggagtcttgctctgttgcccaggctggagtgccgtggcgccatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg s panTro4.chr19 59109291 544 + 63644993 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGTTGC-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGTATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGATAAAGATAGGCCTGGCACACCTGGGCACCCGTCTATATCTTTATATGATGTCTC-AAAACAATTCTGTTTATGTGGCCTGTTTGCTAGTGGATGAGAGTAGACTATGAAGTGGAATTTCTGGGCTAAGTTATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTGTTG--TTTTTTTAATTAAGTTTTCTCGttttatttagttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55986671 543 + 60714840 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTCATTCTCCCTTCTGGTGT-----CTCTGTTCCAGTGATGAGAGTTGTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGTAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTGGTAATGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACTTGTCTGTGTCTTTATATGATGTCTC-AAAACAGTTCTGTTTATGTGGCCTGTTTGTTGGTGGATGAGAGTAGACTATGAAGTGGGATTTCTGGACTAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGGTTTATTG--TTTTTTTAATTAAATTTTCTCGTGttattta-ttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatcttagcctcccaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756374 537 - 106955855 CAGAGGGATGGGGTGCAGGGCTTGTGAGGTTAATTCTGCCTTCTGCTGC-----CTCTGTTCCAGTGATGAGAG--GTGTCATTGGATAAATGGAGCCAGCCTTTTAAC------TTTTAGTGGCACTTGTGGAGGAGGAAAAGTGGATCTGGATC--AGTCTTTGCCCTGTTTCTTAGGTGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAACGACCAGAGCTAAAGATAGGCCTGGCACACTTGGGCACCTGTCTA------TATATGATGTCTC-AAAACAGTTCTGTTTCTGTGGCCTGTTTGCTGGAGG-TGAGAGTAGACTATGCAGTGGAATTTCTGGACTAAGAGATGGTGATAACAGGGTTTGCACATTTGCTTGGTTTATTGTTTTTTTTTAATTAAACTTTCTCGttttatttatttttttgagacggagtcttgctctgtcgcccaggctggagtgccgtggcgcaatttcagcttactgcaacccctgcttcctgggttcaaacaattctcctatctcagcctcccaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60043537 543 + 64156825 CAGAGCGATGGGGCGCAGGGCTTGTGAGGGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGGCAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAATGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGGTAACAGGGTTTGCACGTTTGCTTGCttta-----tttttttttttaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069068 541 + 59248254 CAGAGCGATGGGGCGCAGGGCTTGTGA-GGGCATTCTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGCGGAGTAGGAAAAGTGGAACTGGATC--AGTCTTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTCAGTTTAGTAATGACCAGAGCTAAAGATAGGTCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTGTGTGGCCTGTTTGCTGGTGG-TGAGAGTAGACTAGGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTGCACGTTTGCTTGCttta------tttttttttaaattttttttgttttgtttatttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggctcaatttcggcttactgcaacccccgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46876930 539 + 50890351 CAGAGCGACGGGGCGCAGGGCTTGTGAGGGGCATACTCCGTTCTGCCGC-----CTCTGTTCTAGTGAT--GAGTTGTGTCATTGGACAAATGGAGCCAGCCTTTTAACTTAGTGTTTTAATGGCACTTGTGGAGTAGGAAAAGTGGAACTGGATCAGAGTCGTTGTCCTGTTTCTTAGGCGTGTGGCTTTTTTGCCCAGTTACTGGACCTTGAGTTTGGTAATGACCAGAGCTAAAGATAGGCCT-GCACATTTGGGCACTTGTCTATATCTTTATATGGTATCTC-AAAACAGTACTGCTTATGTGGTCGGTTTGCTGGTGG-CGAGAGTAGACTATGAAGTGGAATTTCTGGAATAAGTGATGGTGATAACAGGGTTTACACATTTGCTTGCTTTA-----TGTTTTTAAAAAATtttttttgt----tttatttttttgggac--agtcttgctctgttgcccaggctggagtgcagtggctcaatttcggcttactgcaacccctgcctcctgggttcaaacaattctcctatttcagcctcctaagtagctggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462290 522 + 49145316 CAGAGGGATGGACCGCAGGGCTTGGGAGGTTCATTGTCCCTTATTGTGAGGCTGCTCTGTTCCAATGATGGGAGTTGTGACCTTGGACAAACAGAGACAGCCTTTTAACTTGGTGTTTTAATGGGACTTGTGGAGTAGGAACAGTGGAGCTGGATC--AGTCTTTGCCCTGTTTCCTAGCTCTGTGGC-TTGTTACCCAGTTCCTGGACTTTGAGTTTAGTAATGACCAGAGCTAAAG--AGGCCTGGCACACTTGGGCACCTGACTATATCTTTATATGATGTCACAAAAACAATTCTGATCATGTGACCTCCTTGCTAGTGG-TGAGAGTAGACTGTGAAGTCGAATTTCTGGAATGAGTGATGGTGATAACAGGTTTT-CACATTTGCTTAT---------TTTTTTAAATTAAA--------------------ttttgagacagaatctcacttta--gcccaggttagagtgcaatggcaggatctcagctcactgcaacctgcacctcccgggttcaagcaatactcctgcctcagcctcccaagtagctggg i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=273581.000000 s hg38.chr19_GL949753v2_alt 177139 164 + 796479 actacagacaggcgcacgccaccacacctggctaattttacttttgagacggagtctcgctccattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga s panTro4.chr19 59109835 164 + 63644993 actacagacaggcgcatgccaccacacctggctaattttacttttgagacggagtctcgctctattgcccatgctggagtgtagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaagcgattctcctgtcttagcctcctaagtagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987214 164 + 60714840 actacagacaggcgcacgccaccacgcctggctaattttacttttgagatggagtctcgctctattgcccgtgctgtagtgcagttgtcgcaatcttggctcactgcaaactccgcctccagagttcaaacgattctcctgtcttagcctcctaagtagctggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102756911 164 - 106955855 actacagacaggcacacgccaccacgcctggctaattttacttttgagacggagtctcgcgctgttgcccatgctggagtgcagttgtcgcaatcttggctccctgcaaactccgcctccagattgcaagcgattctcctgtcttagcctcctaagtagctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044080 164 + 64156825 actacagacagtcacacgccaccacgcccggctaattttacttttgattcggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccgctcactgcaaactctgcctcccgggttcaagcgattttgcagtctcagcctcccaagtagctggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069609 164 + 59248254 actacagacaggcacacgccaccacgcccggctaattttacttttgatacggagtcttgctcagttgcccaggctggagtgcagttggtgcagtttccgctcactgcaaactctgcctcccgggttcaagcgattttccagtctcagcctcccaagtagctggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877469 164 + 50890351 actacagacaggcacacgccaccacatccggcTAAttttacttttgatacggagtctcgctcagttgcccaggctggagtgcagttggtgcagtctccactcactgcaaactctgcctccctggttcaagcgattttccagtctcagcctcccaagtagctggg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e calJac3.chr22 45462812 0 + 49145316 C e papAnu2.chr19 47170785 1331 + 51301725 M a score=600142.000000 s hg38.chr19_GL949753v2_alt 177303 279 + 796479 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGTTTTTTtaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaacctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACATAGACTTAGGCTTACtttactaattgtggtgaaatacacattaaattgaaaatgtaccatcttaaccatc s panTro4.chr19 59109999 279 + 63644993 atcacaggc-----atgggccaccaagcctggctaattttctattattagtggagatgggttttcaccatgttgtccaggctggtGCTTGttttattaagctggtcaaggacatttaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCACGTAGACTTAGGCTTACtttactaattgtggtgaaatatacattaacttgaaagtgtaccatcttaaccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987378 279 + 60714840 atcacaggc-----atgcgccaccaaacctggcTAAttttgtattatgagtggagacgggttttcaccatgttgcccaggctggtgcttgttttattaagctggtCAAGGACATTTaggtggtatttagcaaaggcctgaacaggagagaatctgtaaaatgtctcagggaacagcatttcaggTGATGACTTTAGGAGGGCATGCAGATCGCATAGACTTAGGCTTACTTTACTAATTGTGGTGAAATATATATTAACTTGAAAATGTGCCATCTTAACCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757075 276 - 106955855 atcacaggc-----atgcgccaccaagcctggcTAAttttgtattattagtggagacgggttttcaccatgttgcccaggctggtGCTTGTTTTATTAAGCTGGTCAAGGACATTTAGGTGGTATTTAGCAAAGGCCTGAA---GAGAGAATCTGTAAAATGTTTCAGGGAACAGCATTTCAGGTGATGGCTTTAGGAGGGCACGCAGATCGCATGGACTTAGGCTTACTTTACGAATTGCGGCGAAATATACATTAACTTGAAAATGTACCATCTTAATCGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044244 284 + 64156825 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATCTGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGATTTAGGCTTGCTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55069773 284 + 59248254 atcacaggctaataatgcaccaccacgcccggctaattttgtattattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTagatggcattgagcaaaggcctgaacaggagagaatctgtgaaatgtctcagggaacagcatttcaggTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTGCTTTACTAATCGTGGTGGAACAGACATTAACATGAAAGTTGATCATGTTAACCATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46877633 278 + 50890351 atcacaggc---taatgcaccaccacgcccagctaattttg---tattagtagagacggggtttcaccatgttgcccaggctggtGCTTGCTTTATTAAGCTGGTTAAGGACATGTAGATGGCATTGAGCAAAGGCCTGAACAGGAGAGAATATGTAAAATGTCTCAGGGAACAGCATTTCAGGTGATGACTTTAGAAGGGCATGCAGATCATATAGACTTAGGCTTACTTTACTAATTGTGGTGGAACAGACATTAACATGAAAGTTGATCATCTTAACCATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45462812 279 + 49145316 atcacagtc-----atgcgccaccatgcagggctaattttgtatttttagtagagaccaggtttccccatgtgggccaggctggtGCTTGCTTTATTAAGCTGGTCAAGGACGTTTAGGTAGCATTAAGCAAAGGCCTGAACAGGAGAGAATCTGTTAAATGTCTCAGGGGACAGCATTTCAGTTGATGACTTGGGAGGGGTATGCAGGTCATACAGACTTCGGCTTACTTTACTAACTGTGGTGAAATAGACGTTAAGATGAAAATCTGTCGTCTTAACCATT i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I e papAnu2.chr19 47170785 1331 + 51301725 M a score=233549.000000 s hg38.chr19_GL949753v2_alt 177582 82 + 796479 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTTGTA s panTro4.chr19 59110278 82 + 63644993 ttG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987657 82 + 60714840 TTG---TTTTAAAATCTGCTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757351 80 - 106955855 TTG---TTTGAAAGTCTACTCTGAGATGC--TGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCGAGATTGGCGTTAGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044528 82 + 64156825 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCGTGACCAAGATTGGCATTAGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070057 82 + 59248254 TTG---TTTTAAAATTTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACGGCAGATTGGCATGACCAAGATTGGCATTAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172117 82 + 51301725 TTG---TTTTAAAATCTACTCTGAGATGCAGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTA i papAnu2.chr19 M 1331 C 0 s chlSab2.chr6 46877911 82 + 50890351 TTG---TTTTAAAATCTACTCTGAGATGCGGTGTTATTGGAGTGCTTTCTACAGCAGATTGGCATGACCAAGATTGGCATTAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463091 85 + 49145316 TAGGATCTTGAGCTTCTGCTCTGAGACGCGGTGTTGCTGGAGTGCTTTCTACAGCAGACTGGCACCCCTGAGACGGACATTAGTA i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102989981 483 + 122678785 I a score=531398.000000 s hg38.chr19_GL949753v2_alt 177664 194 + 796479 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGCGCATGTTTAGCTACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt s panTro4.chr19 59110360 194 + 63644993 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-GGCAT--GAGAGTGGTCATCCATGTTAGGCGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTGTCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987739 195 + 60714840 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTATGGTGAAAAGCAGTCTCTACGCCTGAGCCCTGACTGTTGTGGCAT--GAGAGTGGTCGTCCATATTAGGTGTTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGCTTGCAGATGTTAGAAGC------------------tt--tttcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757431 194 - 106955855 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGACTTATGGTGAAAAGCAGTCTCTACACCTGAGCCCTGACTGTTA-AGCAT--GAGAGGGGTCATCCATATTAGGCATTGAGAAAGTCCTGGAGCATGTTTAGCCACAGATTATCACAGTTTGT-CCCAGGTTTGCAGATGTTAGAAGC------------------tt--tttttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044610 210 + 64156825 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGCtttttttttttttttttttt--ttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070139 206 + 59248254 TTTCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGAC--TGA-GGCAT--GAGAGTGGTCATCCACGTTAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCCGGGCTTGCAGATGTTAGAAGC----TTTTTTTTTTTttttt--ttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172199 198 + 51301725 TATTCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCATGATTTGTGGTGAAAATCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGCCATCCATAGGAGGCATTGAGAAGGTCCTGGAGCATGCTTAGCCACAGATTATCGCAGTTTGACCCCGGGCTTGCAGATgttagaagc---------------ttttt--ttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46877993 208 + 50890351 TATCCTGAGACGCTGCTTT-TGCCTGAGTTTGGGTAGTCGTGATTTGTGGTGAAAAGCAGTCTCTGCACCTGAGCCCTGACTGTGA-GGCAT--GAGAGTGGTCATCCATATTAGGCATTGAGAAAGTCCCGGAGCATGCTTAGCCACAGATTATCGCAGTTTGA-CCTGGGCTTGCAGATGTTAGAAGC----CTTTTTTTTTTttttt--ttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463176 193 + 49145316 TATCCTGAGACGCTGCATT-TGCCTGCGCTTGGGTAGTCATGATTTATGGTGAAGAGCAGAGTCTGCACCTGAGCCCTGACTGTTA-GGCGTCAGAGAGCGGTTGTCCATATTGGACAT------------GGAGCGTGCTTAGCCACAGATTATCACAG--TGC-CCCAGGCCTGCGGATGTTACAAGC-------TTTCTtttctttt--ctttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990464 121 + 122678785 TATCCT--GATGTTGCTTTGGGCCTGAGCTTAGGGAATCTTGGTTTATGGTGAAAGGCAG-----------GAG-------------GGGCT--GGGAATA-----------------------------------ATGCCTGGT---------------TTTTT-CCTGAGTTTTCAAA-GTTACTAGT------------------TTGATTTCTTT i canFam3.chr1 I 483 I 110 e mm10.chr7 3704779 907 + 145441459 I a score=374450.000000 s hg38.chr19_GL949753v2_alt 177858 147 + 796479 aaata--------ggcacaggatcttgcagtgttgacc-----aggatggtttccaactcctaacctcaagtgatccatccacctcagctttccaaagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG s panTro4.chr19 59110554 147 + 63644993 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctaacctcaagtgatccttccacctcagctttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55987934 147 + 60714840 aaata--------ggcataggatcttgcagtgttgccc-----agggtggtttccaactactgacctcaagtgatccttccgcctcaggtttccatagtgctggggttacaggtgtaagccaccgcacctgaccCTTTCATTCTTTTCGTCGATTTGTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757625 134 - 106955855 aaata--------ggcacaggatcttgcagtgttgccc-----aggatggtttccaactcctgacctcaagtgatcc-------------ttccatagtgctggggttacaggtgtaagccactgcacctgaccCTTTCATTCTTTTCGTCAATTTGTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044820 147 + 64156825 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070345 147 + 59248254 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccacctcaaccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172397 130 + 51301725 aaaaaaaaaaaaNGGCACAGGATCTTGcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaAATAG-------------------------TGCACCTGaccctttcattctttttgtcaATTTGTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878201 147 + 50890351 aaata--------ggcacaggatcttgcattgttgccc-----aggatggtttccaactcctggcctcaagtgatccttccgcctcagccttaaatagtgctggggttccaggtgtaagccactgcacctgaccCTTTCATTCTTTTTGTCAATTTGTAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463369 134 + 49145316 aaata--------gggacaggatcttgcaatgttgcccaggataggatggtttccaactcctggcctca------------------gccttgcaaagtgctggaattacaggtgtaagccactgcaccagaccCTTTCACTCTTTTTCTTAGATTGTAG i calJac3.chr22 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102990585 110 + 122678785 I a score=1285342.000000 s hg38.chr19_GL949753v2_alt 178005 445 + 796479 ACCCCGTTGATAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TATAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT s panTro4.chr19 59110701 445 + 63644993 ACCCCGTTGGCAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGGACATAGATCCTAATTGCAATGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGTTGTTCAGGTGAGTACGCTTTCTAGTAAATGAAGCCATCTAGCCTAGTCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------AGCGAGATTCTGAGTCTC-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988081 446 + 60714840 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCATAGATACTGATGCT-GGGTGGGAATTCATCCCAGGGTTCTGTGAGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGACTTTCTGAATATAGATCCTAATTGCAGTGAAACTTACAGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTAAGGTGAGTACACTTTCTAGTAAATGAAGCCATTTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTctttggtgtaatcctgccttgat------tcagatccagcctttcccactaagctgtgtgact------ggcgagattctgagtctcagtctgtT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102757759 437 - 106955855 ACCCTGTTGACAATCTCATGAACGTGCTGGAGATCCCTCCCCCATGGATACCGATGCT-GGGTGGGAGTTCATCCCAGAGTTCTGTGGGGAGTGGGC--TACAGCTGGTTCTGGTTTTAGGGAGGAC-TTCTAGATATAGATCCTAATTGCAATGAAACTT--AGTCATGTGGGAAAGCGGTGCAGATGTCTGAGGGTTATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAAGGGGTACACAGCTGTTCAGGTGAGTACACTTTCTAGTAAATGAAGCCATCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAAGATGTGTGACT------GGCGAGAT--TGAGTCTT-GTCTGTT---AAGACTG--------AACAG-CCGCCAACATTTGGCTGGCAGT---T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60044967 441 + 64156825 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070492 441 + 59248254 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCCGAATATAGAGCCTAATCGCAATGAAACTT--AGTCATGTGAGAAAGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACA------GGCGAGATTCTGAGTCTC-ATCTGGTA-AAAGACTG--------AACAGCCCGCTAACATTTGGCTGGCAGT---T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172527 440 + 51301725 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGAAATGAAACTT--AGTCATGTGAGAGAGCGGTGCAGGTGTCAGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTACACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACAGGAA-GGAGGAG-CTTGGA-----TGTTTGCTCTTTGGTGTAATCCTGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCGGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCAAACATTTGGCTGGCAGT---T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878348 437 + 50890351 ACCCCGTTGACAATCTCATGAAAGTGCTGGAGATCCCTCCCCCGTGGATACTGATACT-GGGTGGGAGTTTATCCCAGAGTCCTGTGGGGAGTGGGC--TACAGCTGGCTCTGGTTTTAGGGAGGACTTTCTGAATATAGAGCCTAATCGCAATGAAACTT--AGTCACGTGAGAACGCGGTGCAGGTGTCTGAGGGATATTTGTGGTTTTCCAAGGCAGAAGTGAA--AATTCCCAGGGGGTAGACAGCTGTTCAGGTAAGTATACTTTCTAGTAAATGAAACCCTCTAGCCTAGCCAGGGACGGGAA-GGAGGAG-CTTGGA--------TTGCTCTTTGGTGTAATCCCGCCTTGAT------TCAGATCCAGCCTTTCCCACTAA--CGTGTGACT------GGCGAGATTCTGAGTCTC-ATCTGTTA-AAAGACTG--------AACAG-CCGCTAACATTTGGCTGGCAGT---T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463503 445 + 49145316 CCCCCTTTGACAATTTCATGAAAGTGCTGGAGTTGCC-AGCCCAAGGTTACTAATAATCGGATGGGAGTTTATCCCAGAGTCCTGTGGCAAGTGGGCTATACAGCTGGTTCTGGTTTTAGGGAGGACTTTGTTCATATAGAGCCTAATAGCAATGAAATTT--AGTCATGTGAGAA-GCGGTGTAGGTGTCTGAGGGTTATTTGTGGTTTTCCAAGGGAGAAGTGAA--AGATCCCAAGGGGCAGACAGCTCTTTAGGTTGGTACACTTTCTAGTAAGTGAAGCCATCTAGCCTAGCCAGGGGCAGGAAGGGAGGAG-CTTTGA-----TGTTTGCTCTTTGGTGTAGTCGTGCCTTGAT------TCAGATCCAGCATTTCCCACTAA--CGTGTGACT------AGCAAGAT-CTGAGTCTC-ATCTGTTAGAAAGATTG--------AACAG-CTGTTAACGTTTGGCTGACAGTTAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102990695 419 + 122678785 ACCCAGTT---------CTGAAAATTCAGGAATCCCCTCCCCT----ATCCCACAGCT-AGTTGAAAGTGGA----GGAACTTTGTGAAGA--------TAGAGCTAGGTCAGGTCCTTGGTTGGA---------------------------TAAGCATT--CGTGTGGTGGGGTTGAGCAGCAGGTAACCCAGGAGTACTTGTGGTTCCCTGTGGCAGAAGAGGAGTGAGTTACAGGAGGTAGGCAGCACCACAGGTT-GTAGGCTTTCAAGTAAATAAGGCATTTAACTCCA---AGGGACAAGAA-GGAGGAACCCTGGAAGCTCTGCCAGTCTATTGGAGAGGTGTCTCACTCATAGAGCCTGGGGTCCAATCCATCCCACCGAGGCCTATGACTTTGGGCAGAAAACTTCTCTG-CTT-GCCTGTTCAAGAGACTGACTCTTAAACCAA-CAGCCAACATGTGGCAGAGGGTTCAT i canFam3.chr1 I 110 I 30 e mm10.chr7 3704779 907 + 145441459 I a score=485882.000000 s hg38.chr19_GL949753v2_alt 178450 190 + 796479 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcaggagacctcaagtcagagaccagcctggccaacgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc s panTro4.chr19 59111146 182 + 63644993 AATCAACAGATAGAggccaggcgtggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccagcctggccaatgtggtgaaattccatctctacgaaaaatacaaaaattagccgagcatggtggtgt--gcctataatcccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988527 182 + 60714840 AATCAACAGATAGAggccaggcgtggtggcttatgcctgtaaccccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agtttgagaccagcctggccaacatggtgaaattcgatctctacgaaaaatacaaaaattagccgggcatggtggtgt--gcctgtaatcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758196 182 - 106955855 AATCAACAGATAGAggcccggcgtagtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcggatcacttgaggtcagg--------agttcgagaccaccctggccgacatggtgaaattccatctccacgaaaaatacaaaaattagccgggcatggtggtgt--gcctataatcccagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045408 182 + 64156825 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatctcttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtgttgg--tcctgtaatcccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55070933 182 + 59248254 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47172967 182 + 51301725 AACCAACAgatagaggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtcccatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagccgggcctggtggtgg--tcctgtaatcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878785 182 + 50890351 AACCAACAGATAGAggccaggcgcggtggctcatgcctgtaatcccagcactttgggagaccgaggtggtccgatcacttgaggtcagg--------agttggagactagcctggccaacatggtgaaattccatctctactaaaaatacaaaaattagctgggcctggtggtgg--tcctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45463948 135 + 49145316 AACCAAC----Agaggccgggc--------------------------------gggaga-------------atcacctgaggttaag--------agttcaagaccagcctggccaacatggtgaaaccccatctttactaaaagtacaaaaattagctggatgtggtggggggcgcctgtatttccagc i calJac3.chr22 C 0 I 19 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I a score=209023.000000 s hg38.chr19_GL949753v2_alt 178640 132 + 796479 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagactgcagtgagccgagatccgcggcactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCCCCACCCCCCAGCA s panTro4.chr19 59111328 129 + 63644993 tactcgggaggctgaggcaggagaattgattgaacttgggagacggagattgcagtgagccaagatccgcgacactgcac-------tgggtgacagcgagac-----------AC-AAAACAACACGAACTCCCCCC---CCCCCCAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988709 132 + 60714840 tactcgggaggctgaggcaggagaattgattgaacctgggagacagagattgcagtgagccgagatccgcggcactgcac-------tgtgtgacagcgagac------tcaaaac-aaaaaaacacaaaCTACCC-----ACCTCCAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758378 126 - 106955855 tactcaggaggcagaggcaggagaattgattgaacctgggagatggcgattgcagtgagccaagatccgcggcactgcac-------tgggtgacagcgagac-----------tcaaaaaaaaCACGAATTTC-------CCCCTCAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045590 126 + 64156825 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071115 126 + 59248254 tactcgagaggctgaggcgggagaattgatcgaacctgggagacgga-----------------atccgcggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATT-C-------ACCCTCAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173149 127 + 51301725 tactcgggaggctgagacaggagaattgatcgaacctgggagacgga-----------------atcCCCggcactgtgctccagcttgggtgacagcgagactccatctcaaaacaaaaaaatcaggaatTCC-------ACCCTCAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46878967 127 + 50890351 tactcgggaggcggaggcgggagaattgatcgaacctgggagacgga-----------------atccgcagcactgcactccagcttgggtgacagcgagactccatctcaaaacaaaaaaaTCAGGAATTCC-------ACCCTCAGCA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991114 30 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=74518.000000 s hg38.chr19_GL949753v2_alt 178772 30 + 796479 CAACTGTGAAGAAATGTAGGAGTCATGTCC s panTro4.chr19 59111457 30 + 63644993 CAACTGTGAAGAAATGTAGGAGTCATGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988841 30 + 60714840 CAACTGTGAAGAAATGTAGGAGTCATGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758504 30 - 106955855 CAACTGTGAAGAAATGTAGGAGTCATGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045716 30 + 64156825 CAACTGTGAATAAATGTGGGAATCATGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071241 30 + 59248254 CAACTGTGAATAAATGTGGGAATCATGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47173276 30 + 51301725 CAACTGTGAATAAATGTAGAAATCATATCC i papAnu2.chr19 C 0 I 1499 s chlSab2.chr6 46879094 30 + 50890351 CAATTGTGAATAAATGTAGGAATCATGTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991144 28 + 122678785 cagccgtaaagaaact--ggtattgcatcc i canFam3.chr1 I 30 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=502350.000000 s hg38.chr19_GL949753v2_alt 178802 270 + 796479 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGTGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTCAATA s panTro4.chr19 59111487 270 + 63644993 ATTTTTCAGATAAGAAATGAAGGCATTGTAATACCTGACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--TCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55988871 270 + 60714840 ATTTTTCAGATCAGAAATGAAGGCATTGTAATACCTAACTGCCTTGTAT---GATGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTTTCTTGGTGCATTGGCCCAGCGGAGC-------------CTCAGCAGTAGGACATGCTTTTGTTGATGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CCTCCTGTTCTTTTTCAGGAGATAGATGGTTTAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758534 270 - 106955855 ATTTTTCAGATCAGAAAGGAAGGCGTTGTAATACCTAATTGCTTTGTAT---GAGGACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTACAGTATTTTAAATTCTCCTGGCGCATTGGCCCAGTGGCGC-------------CTCAGCAGCAGGACATGCTTTTGTTGCAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTACT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGCTGAC--CTTCGTGTTCTTTTTCAGGAGATAGATGGTTTAATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60045746 276 + 64156825 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071271 276 + 59248254 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTTGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTCGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGGTTTTGTTGAAGGTGTAAGGTTTAT----TGTGCTGTTGAAAACTATT---GTCTTCATACTTC---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAGGAGATAGATGGGTTAATA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879124 272 + 50890351 ATTTTTCAGATCAGAAATGAAGGCGTTGTAATACC----TGCCTCGTAT------GACAAGGAC--CTGTTTCCCACTGAG----GTCCTCCCTG-GTTTGCATTTTTAAAGCATTTTAAATTCTCTTGGTGCATTGGCCCAGCGGAGCCCGTGTAACAGTACTCAGTAGCAGGACATGATTTTGTTGAAGGTGTAAGGTTTAT----GGTGCTGTTGAAAACTGTT---GTCTTCATACTTA---AAGGTTTTGCCTGTGGTTGAC--TCTTCTGTTCTTTTTCAG----TAGATGGGTTAATA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102991172 288 + 122678785 gtttttcagatcagaaactgaagtacTTGAGT-------TGCCTTGTGTCATGATGACAGGGAAAGACGTATGCGTCTGAGAATTGTCCTCATTGCTTTTACGTTTGTAAAATGTCCTGATTCTTGTT------TTGGCCAAACGGAGCCCACGTGATCT--TTCAGTGGTTGGACATACTCCTGTTGAAGATGCAAAGTTTATTCAGTGTGC-ATTGAAAATTATTTTAGTTCTTATATGTAGATAAGGCTGT-TCTGGTGTTGATGGGATGCTGGCTTTCCTCAGTGTGTAGGTGGTTTAATA i canFam3.chr1 C 0 I 1810 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=1281984.000000 s hg38.chr19_GL949753v2_alt 179072 763 + 796479 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggcggatcacccgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccttagtctctactgaaaa-aatacaaaattagcggggcgtggtggcgcatgcctgtaatcccaggctgaggcaggagaatcccaggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacgagagcgaaactctg---------------------------------tctcaaaaatgataataaaTGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccagctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactgtgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCttaagtttccattttctaatgtaaagacaaaaaggcgtgaagtgtccaaagaggtaaatgatcccaaactcattttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaatatcctctgatg s panTro4.chr19 59111757 763 + 63644993 AATGTGGGCctgagtgcagtggctcatgcctgtaatcccagcactttgagaggccaaggcaggcggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaaaccccctagtctctactgaaaa-aatacaaaattagcggggcgtggtggtgcatacctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaactctg---------------------------------tctcaaaaaTGATAATAAATGTGAAACAT--TTTTTTAAAATCATGCCTTTGTTTTGCCTAATGGTGACgatctca---ctttgtctcccgggctggagcacagtggcatggtcgtggctcactgcagcctggacctcctgtgcttaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtaccaccatgcccggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaattattgggtttataggcCAGGCATAAGGGACTGTGCGTGGCTTAAGTTTCCATTTTCTAATGTAAAGACAAAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCAGACTCATTTTCATCACCTTTTGGACGTGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989141 754 + 60714840 AATGTGggccag-gtgcagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggtggatcacctgaggtcgggagtttgagactagcctgaccaaagtggagaagcgccctagtctctactgaaaa-aatacaaaattagctgggcgtggtggcacatgcctgtaatcccaggctgaggcaggagaatcccgggaggcggagtttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagggaaa--ctg---------------------------------tctcaaaaatgataataaaTGTGAAACA---TTTTTTAAAATCATG-CTTTGTTTTGCCTAATGATGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtgggtcactgcaacctgga----ctgtgcttaagtgatcctcctcagctctagtagctgggaccgcaatccaccatgtaccaccatgcctggctaatttagttttac--ttttttgtttgttttggtacaaatgcggtctcactatgttgccaaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggtttataggccaggcataagatactgtgcctggctGAAGTTTCTATTTTCTAATGTAAAGACAGAAAGGCGTGAAGTGTCCAAAGAGGTAAATGATCCCGAACTCATTTTCATCACCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102758804 760 - 106955855 AATGTGggccgg-gtgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcaggcggatcacctgaggtc-ggagtttgagactagcctgaccaaagtggagaaaccccctag--tctactaaaaa-aatacaaaattagccgggcgtggtggcgcatgcctgtaatcccaggctaaggcaaggcaatcccgggaggcggagtttgcagtgagccgagatcacaccattgcactccagcctgggcagcaagagcgaagctctg---------------------------------tctcaaaaaTGATGATAAATGTGAAACAC-ATTTTTAAAAATCATGCCTTTGTTGTGCCTAATGGTGATgatctca---ctttgtctcccaggccagagcacagtggcgtggtcgtggctcactgcagcctggacctcctgtgcctaagtgatcctcctcagctctagtagctgggaccacaatccaccatgtatcaccatgcctggctaatttagttttac--ttttttgtttgttttcgtacaaatgcggtctcactatgttgccgaggctagtttcaaacttctggactcaactgatcctcctgcctcagcctcccaaaatactgggttgataggccaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAAGACAAAAAGGTGTGAAGTGTCCAAAGAGGTAAATGATCCCAAACTCATTTTCATTGCCTTTTCGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAATATCCTCTGGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046022 793 + 64156825 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcaggagttcaagcccagcctgaacgacgtggagaaaccccctagtctctactaaaaacaatacaaaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccgtctgaaaaaTGATTGGCAACGAGGGAAACTCCATCTGAAAAATGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggttgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTCTAATGTAAACACAAAAAGGCATGAAGTGTCCAAGGAGGTAAATGATCCCAAACTCGTTTTCATTGCCTTTTGGACATGTTTTTGTATTTTGATATTCAGGTGTTTAAAAATTCTCTGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55071547 760 + 59248254 AATGTGggttgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaacaatacagaattagccggccatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcagagtttgcagtgagccgagatca--ccattgtactccagcccgggcaac--gagggaaactccg---------------------------------tctgaaaaaTGATAATAAATGTGAAACACTTTCTTTTTAAATCATGGCTTTATTTTGCGTAATGGTGATgatctca---ctttgtctcccaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgcctggctaatttagttttcc--tttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggactcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaattctctgatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46879396 765 + 50890351 AATGTGggtcgg-gcgcggtggctcacacctgtaattccagcactttgggaggcaaaggcaggcggatcacctgaggtcgggagttcaagaccagcctgaacaacgtggagaaaccccctagtctctactaaaaaaagtacaaaattagccaggcatggtggtgtgtgcctgtaatcctaggctgagtcaggagaatcccgggaagcggaatttgcagtgagccgagatca--ccattgtactccagcctgggcaac--gagggaaaatccg---------------------------------tctgaaaaatgataataaaTGTGAAACACTTTCTTTTCAAATCATGGCTTTATTTTGCCTAATGGTGATGTCTCCAAcgctttgtctcctaggctggagcacagtggcatggtcgtggctcactgcaacctggaccgcctgtgcttaagtgatcctcctcagctctagtagctgggactgcaatccaccatgtaccaccatgactggctaatttagttttcccttttttt-tttgttttggtacaaatggggtctcactatgttgcccaggctggtttcaaacttctggatgcaatcgatgctcctgcctcagcctcccaaaatactgggtttatagggcaggcataaggtactgtgcctggcTGAAGTTTCTATTTTctaatgtaaacacaaaaaggcatgaagtgtccaaggaggtaaatgatcccaaactcgttttcattgccttttggacatgtttttgtattttgatattcaggtgtttaaaaatcctctgatg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I e papAnu2.chr19 47173306 1499 + 51301725 I a score=18134.000000 s hg38.chr19_GL949753v2_alt 179835 14 + 796479 ttga--gtta----aaaaag s panTro4.chr19 59112520 16 + 63644993 TTGAGTGTTA----AAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989895 16 + 60714840 TTGAGTGTTA----AAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759564 16 - 106955855 TTGAGTGTTA----AAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046815 18 + 64156825 TTGAGCATTAAA--AAAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072307 18 + 59248254 ttgagcattaaa--aaagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174805 13 + 51301725 -------ttaaaataaaaaa i papAnu2.chr19 I 1499 C 0 s chlSab2.chr6 46880161 18 + 50890351 ttgagcattaaa--aaagag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e canFam3.chr1 102991460 1810 + 122678785 I e calJac3.chr22 45464083 19 + 49145316 I a score=1677080.000000 s hg38.chr19_GL949753v2_alt 179849 736 + 796479 aacaaaaattgaagccatagtatgacataggatgctggaaatgcacacagctggtgtt--tccattttgat----tctccctacctgtaactgctccctacTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTAGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAAGGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAG--GGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTGTTAGGTTATATACATACTAGATCTATTTTTGGTGGAAAATTTTGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGATGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAATCTCACATCTGCTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC s panTro4.chr19 59112536 738 + 63644993 AACAAAAATTGAAGCCATAGTATGACATAGGATGCTGGAAATGCACACAGCTGGTGTT--TCCATTTTGAT----TCCCTCTACCTGTAACTGCTCCCTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATATGGATCTATTTATGAAAGCTTGCATGAATGGTTTGCTGTAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGGTTGAGGTGTTTACCCCA--GTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGCGGGAGCCTAGGGGATGGCGTTTGCCCCCAGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTAGACAGGGTAAGGAGCAAGCCATCCTGAGCCTGGGGTTGGAAGAAAGGTGTAGTAGCTGGCATCTGTTGGAT-ATTTTATGCAGTGC----ATTCTTAGGTTATATACATACTAGATATATTTTTGGTGGAAAATTTCGTACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAACTCTAGTGTTAGAAATTACTTTTCTCTC---CTTAAAAGGTGTAGATACTGC--------TATTTATGGCAC--GGAATGTGATTCAGTCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGGCT-GAGGATATGAACTCTTCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55989911 742 + 60714840 AACAAAAATTGAAGCCATAGTATGACATAAGATGCTGGAAATGTACACAGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCTTACTGGGAAAACTTT--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAACTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCCGAACGCGTATGGGATTATAGCAGTGAGCGGGAGCCTAGGGGAAGGCGTTTGCCCCCAGGGCCCTGTGGCTGTGGGCAAGGGCAGT---CCAGAGTTATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGTTGCAAGTCGTCCTGAGCCTGGGGTTGGAAGAAAGGTATAGTAGCTGACATCTGTTGCAT-ATTTTTTGCAGTGC----ATTGTTAGGTTATATACATACTAGATATATTTTTGGTGCAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTGTCTC---CTTAAAAGGTGTAGATACTGC--------TA-TTATGGCACAGGGAATGTGATTGAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-GAGGATATGAACTCTTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102759580 742 - 106955855 AACAAAAATTGAAGCCATAGTATGACATAGGTTGCTGGAAATGTACACGGCTGGTGTT--TCCATTTTGAT----TCTCCCTACCTGTAACTGCTCCCTACTGGGAAGAC--T--GGGTCCTCACAAAGTGAGCTAGCTTTCTTTCAAAC--TGCTTGGAGGGT---AACAGTGCCAGGAATATCAGAAGTGCCTGATGCATGTGGATCTATTTATGAAAGCTTGCTTGAATGGTTTGCTATAACTAGTAAGAGCCACTTTTTATAA--------AAGTGCAC---ATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAATGAGTGGGAGCCCAGGGGAAGGCGTTTGTCCCCGGGGCCCTGGGGCTGTGGGCAAGGGCAGT---CCAGAG-TATTAGCTAGAAGCCACGGCTTTGGACAGGGTAAGGAGCAAGCCGTCCTGAGCCT-GGGTTGGAAGAAAGGT---GTAGCTGACATATGTTGGAT-ATTTTATGCAGTGCATTGATTGTTACGTTATATACATACTATATATATTTTTGGTGGAAAATTTCATACAGAATAGTAAAATAAATGACATGTACTTAAC----TGGAAAAATTCTAGTGTTAGAAATTACTTTTCTCTT---CCTAAAAGGTGTAGATACTGC--------TATTTATGGCACAGGGAATGTGATTTAATCTCGCATCTGGTTAATCAGAAGAGCGAGCTTTCTGGACT-GAGGGGATGAACTCTTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60046833 729 + 64156825 AACAAAAATTGAAGCCATAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTATAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55072325 729 + 59248254 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtacacagctggtgtt--tccattttgattctatctccctacctgtaactgctccctATTGGGAAGACTTT--GGGTCCTCAC--AGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTAACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTACGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGACATTTGCCTTGAC--------GGAGGTGGGCAGGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTTGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTAGC----TGGAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47174818 731 + 51301725 aaaaaaaattgaagccatAGTATGACACAGGATGCTGGAAAGGTACACAGCTGGTGTT--TCCATTTTGATTCTATCTCCCTACCTGTAACTGCTCCCTATTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTCGCTTGGAGGGTGACAACAGTGCCAGGAATATCAG-AGTGCCTGATGAATGTGGGTCTGTTGATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGGTGTTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAAGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATacatattgtgtatatttttagtggaaaatTTCATACAGAATAGTAAAATGAATGACATGTGCTTAGC----TGGAAAAATTCTAGtgttagaaatttcttttctctc---cctaaaAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTCAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880179 729 + 50890351 aacaaaaattgaagccatagtatgacacaggatgctggaaaggtatacagctggtgtt--tccattttga---aatctccctacctgtaactgctccctgTTGGGAAGACTTT--GGGTCCTCACAAAGTCAGCTAGCTTTCTTTCAAACTTTGCTTGGAGGGTAACAACAGTGCCAGGAATATCAGAAGTGCCTGATGAATGTGGGTCTATTTATTAAAGCTTGCTTGAATTGTTTGCTATAACTAGTAAGAGGCACTTTTTATAA--------AAGTGCACATAATAAGGAAAAAAGTTTGAGACACTTACCCCAGTGTCAAGGGGCAGTTGATTTGCTGAACGCGTGTGGGATTATAGCAGTGAGTGGGATCCTACAGGAAGGCATTTGCCTTGAG--------GGAGGTGGGCAAGGGGAGT---CCAGAG-TATTAGCTAGAAGCCATGGCTTTGGACAGGGTAAGGAGCAAGTCGTCCTGAGCCTGG------------GGTGTAGTAGCTGACATCTGTTGGAT-ATTTTATGCAGTGT----GTTGTTAGGTTATATACATACTGTGTATATTTTTAGTGGAAAATTTCATACAGAATAGTAAAATGAATGACATGTACTTGGC----TGAAAAAATTCTAGTGTTAGAAATTTCTTTTCTCTC---CCTAAAAGGTGTAGGTACTGA--------TATTTATGGCATAGGGAATGTGATTTAATCTCACATCTGGTTAATCAGAA----GAGCTTTCTGGACT-CAGGATATGAACTCTTAACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102993270 643 + 122678785 AAAAAAAAT----GCCATGTTACAATTTGGGGTATTGGGAA-------AGATAGTGTTTCTCCATTTTGATCCTATCTCTTTTCCATTAAGTG--------TGCTAAGACTTTCAGTGTCTTCATAAAGTCCTGCAGCTTTCCTTG------CGGGCAAGAGGT---CACGATGCAGAGAATATTGGAAATGACCAAT-AATATGG-------------AGCTTGCTTGAATAG-----------AAATAATGGTTACTTCATAACATCCTCTTTAAGGGAAA---GCAGGGGGGAAAGGGTTGGGCCTTTACCCCA-TGACAAGGT---GTTGATTTGCT--ATGAGTCTGTGGTAATCCCAGTGAGTATGAGCTCTGGGCCAGG-GTTTGCCCCCAGGGTCCT------------AAGGGCAGTCCCCCATGG-AGCCATCT-GGAGCCAT-----------GGACACATAGCAGGGCCTCCTGTGCCTGG------------GG---------------CTGCTGGGTCACTTCTTGCCATGC----ATTGTTAA---AACCACATG----ATAATTTTTTAGTGGAAAACCACAGGTAAAATAGTAAATCGAGTAACAGATACTCAAACACGTGG-------CCAGTTTGGGA-------TTTTTCTCAGGCCTAGAAA--CTAGGTACTGACAGTCTAGTATTATTGGTAAGGAGGGTGGTGTTTAGCCTCAGATCTGACTAGT----A----GGGCTTTTTTGACTGCAGCGGGTTAGCCCTTGACC i canFam3.chr1 I 1810 C 0 e mm10.chr7 3704779 907 + 145441459 I e calJac3.chr22 45464083 19 + 49145316 I a score=241835.000000 s hg38.chr19_GL949753v2_alt 180585 83 + 796479 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGCAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGGTGATTT s panTro4.chr19 59113274 83 + 63644993 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990653 82 + 60714840 ACTGTGCTTTGTT-ACGGTG-GTAGTAGCTTAATAGTAGCTGCATTTGGTC-TTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760322 83 - 106955855 ACTGTGCTTTGTT-GCGGTG-GTAGTGGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCCTGTAAGGAGATGATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60047562 84 + 64156825 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073054 84 + 59248254 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175549 84 + 51301725 ACTGTGCTTTGTTAACGGTG-GTAGTAGCTTAATAGCAGCTGCACTTGGACTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880908 82 + 50890351 AC--TGCTTTGTTAACAGTG-GTGGTAGCTTAATAGCAGCTGCACTTGGTCTTTTGCAG-----ACTGAGTCCTTGTAAGGAGATGATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464102 80 + 49145316 ACTGTGCTTTGTC-AGGGTG-GGAGGAGCTTAATCGCAGCTGCACTTGCTCTTTTGCAG-----ACTGAGTCGTTGTAAGGAAATCT--- i calJac3.chr22 I 19 C 0 s canFam3.chr1 102993913 82 + 122678785 ATTATG---TGTC-ACTGTGAGTAATGGTTTAGCAACAGCAGCA----GAGTTTTACAGGGGTTACTAAGTCCTTTTGCAGGGATTGTGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=178787.000000 s hg38.chr19_GL949753v2_alt 180668 120 + 796479 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATG-TATGCTC-----TCAGATGAGGAGGCAGGTGTATTTTGCCCTCCTGTCATCTG-CAGTTTACTATGAATGATGACCTGACAACCATAGGGT s panTro4.chr19 59113357 63 + 63644993 CCTTTACTCTTGCTAAGAATGTGGAGCGAGGGATGTTATGCTC-----TCAGA-----------------------------------------------------------TGACAGCCATAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990735 121 + 60714840 CCTTTAGTCTTTCTAAGAATGTGGAGCGAGGGATGTTACATTC-----TCAGATGGGGAGGCAGGTGTATTTTGCCCTCCTGTCAGCTG-CAGTTTACTATGGATGATGACCTGACAACCATAGGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047646 122 + 64156825 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTGACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073138 122 + 59248254 CCTTTACTGTTGTTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CACGTTACTATGGATGATGGCCTGACACCCATAGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175633 122 + 51301725 CCTTTACTGTTGCTAAGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTTCTATCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAgggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46880990 122 + 50890351 CCTTTACTGTTGCTACGAATGTGGAGCGAGGGATGTTACACTC----TTCAGATGAGGAGGCAGGTATATTTTGCCCTCCTGTCACCTG-CAGGTTACTATGGATGATGGCCTGACACCCATAGGGT i chlSab2.chr6 C 0 I 38 s calJac3.chr22 45464182 99 + 49145316 CATTTACTCTTGCTAAGAATGTGGAGCAAAGGATGTTACATTT-----TCGGGTGTA-------------TTTGCCCTCCTGTCTCCTGCCAGGTTACTATGGA--------TGATAGCCATAGG-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102993995 106 + 122678785 -CATTTCTCTC-CTGACAATTC----CAGGGAAGGTTCTACTCCTTTTTCAGATGAGAGCAGAGGTGTGTGTGGTCACCTGCCCTCCTT----GGTAAGATGGGTA------TGATCATTAT----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=-1423.000000 s hg38.chr19_GL949753v2_alt 180788 12 + 796479 AGTTTGG-ttttt s panTro4.chr19 59113420 12 + 63644993 AGTTTGG-ttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990856 11 + 60714840 AGtttgt-tttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047768 7 + 64156825 -----GG-Ttgtg i rheMac3.chr19 C 0 I 24 s macFas5.chr19 55073260 8 + 59248254 -----GGTTtgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47175755 7 + 51301725 -----gg-ttttg i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45464281 9 + 49145316 ---CTGG-ttttt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994101 10 + 122678785 GATTTGC-CTT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=1260.000000 s hg38.chr19_GL949753v2_alt 180800 15 + 796479 tgtattgttttgttt s panTro4.chr19 59113432 15 + 63644993 tgtattgtttcgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990867 11 + 60714840 ----ttgttttgttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55073272 15 + 59248254 tgtgtgtgtgtgtgt i macFas5.chr19 I 4 I 7 s papAnu2.chr19 47175764 15 + 51301725 tgtgtgtgtgtgtgt i papAnu2.chr19 I 2 I 7 s calJac3.chr22 45464290 5 + 49145316 ----------tgtgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994111 8 + 122678785 -----TGGATTGT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I e rheMac3.chr19 60047775 24 + 64156825 I a score=9133.000000 s hg38.chr19_GL949753v2_alt 180815 5 + 796479 tgtga s panTro4.chr19 59113447 5 + 63644993 tgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55990878 5 + 60714840 tgtga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047799 5 + 64156825 tgaga i rheMac3.chr19 I 24 C 0 s macFas5.chr19 55073294 5 + 59248254 tgaga i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47175786 5 + 51301725 tgtga i papAnu2.chr19 I 7 C 0 s calJac3.chr22 45464295 4 + 49145316 -gtga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994119 4 + 122678785 -GTGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e chlSab2.chr6 46881112 38 + 50890351 I a score=393117.000000 s hg38.chr19_GL949753v2_alt 180820 193 + 796479 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggccgggct s panTro4.chr19 59113452 193 + 63644993 cagggcctcactc-tgtcgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctgggttcaagcagttttccttcctcagcctcctgaatagctgggattacaggcagtgcgccaacggcctggctaatttttcgtaatcttagtggagacgggctttcgccatgttggctgggct i panTro4.chr19 C 0 I 14 s ponAbe2.chr19 55990883 193 + 60714840 cagggtctcactc-tgttgcccaggctggagtgcagtggccccatctcaggtcactgcaacctccgcctcctggattcaagcagttttccttcctcagcctcctgaatagccgggattacaggcagtgcgccaacagcctggctaatttttcgtaatcttggtggagacggggtttcgccatgttggccaggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047804 193 + 64156825 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073299 193 + 59248254 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctaaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175791 193 + 51301725 caggatctcactc-tgtttcccaggctggagtgcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacgggcagtGTGCCaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881150 193 + 50890351 caggatctcactc-tgtgtcccaggctggagagcagtggtcccatctcaggtcactgcaacctccgcctccagggttcaagcaattttctttcctcagcctcctgaatagctgggattacaggcagtgtgccaacagcctggctaattttttgtatttttagtggagacagggtttcggcatgttggccaggtt i chlSab2.chr6 I 38 C 0 s calJac3.chr22 45464299 187 + 49145316 caaggtttcactcttgtcatccaggctggagtgcagtggctccatctcaggtcacagcaacctctgcctgc-gggttaaagtgattttcctacctcagcctcctgaatagctgggattacaggca-tacaccaacagcctggctcattatttgtatttttagtagacctggggtttcgccatgttgccc----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994123 52 + 122678785 ---------------------------GGACCGCAGAGGTTACAC------------------------------------------------------------AGTGGCTGC------------TATGTTAA----------AATCTTTTAT--------------CAGAATT------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C a score=14689.000000 s hg38.chr19_GL949753v2_alt 181013 18 + 796479 ggtctctcaaactcctga s ponAbe2.chr19 55991076 18 + 60714840 ggtctctcaaactcctga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60047997 16 + 64156825 gg--tctcaaactcccgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073492 16 + 59248254 gg--tctcaaactcccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47175984 16 + 51301725 gg--tctcaaactcccaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881343 16 + 50890351 gg--tctcaaactcctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464486 8 + 49145316 ----------actcctga i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994175 9 + 122678785 ---------GGTTCTTAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e nomLeu3.chr10 102760405 0 - 106955855 C e panTro4.chr19 59113645 14 + 63644993 I a score=179010.000000 s hg38.chr19_GL949753v2_alt 181031 107 + 796479 cctcaagtgatccgtctcggactcccgaagtgctgggattacaggtgtgagccaccactcccagccCGTAGGGTGGTTTTGACAGTGACATGGGTCACGGTGA-TGGC s ponAbe2.chr19 55991094 108 + 60714840 cctcaagtgatctgtctcgggctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccCGGAGGGTGGTTTTCACAGTGACATGGCTcacagtgactggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760405 102 - 106955855 cctcacgtgatccgt------ctcccagagtgctgggattacaggtgtgagccaccacgcccagccCATAGGGTGGTTTTGACAGTGACATGGGTCACGGTGACTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048013 108 + 64156825 cctcaagtgatccatctcacactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073508 108 + 59248254 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATATGGGTCACAGTGACTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176000 108 + 51301725 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcatgagccaccacgcccagcccatagGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881359 108 + 50890351 cctcaagtgatccatctcagactcccaaagtgctgggattacaggcgtgagccaccacgcccagccCATAGGATAGTTTTGACAGTGATACGGGTCACAGTGACTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464494 60 + 49145316 ----------------------cctcaAAGTGTTGGGATTACAAGCATG--------------------------GTTTTGACGATGGCCTGGGTCACAGTGACTGGT i calJac3.chr22 C 0 I 27 s canFam3.chr1 102994184 33 + 122678785 ---------------------CTTC-----TGCTCGTATCACAG--------CTCCA----------------------TGATAATGGA------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I e panTro4.chr19 59113645 14 + 63644993 I a score=165718.000000 s hg38.chr19_GL949753v2_alt 181138 69 + 796479 GCT-GTACTACTTGTGCCTCACCGCCGCGGCATGGagctac-caagaggcggagccaggatttgaacccaa s panTro4.chr19 59113659 69 + 63644993 GCT-GTACTACTTGTGCCTCACCACCGCGGCATGGagctac-caagaggtggagccaggatttgaacccaa i panTro4.chr19 I 14 C 0 s ponAbe2.chr19 55991202 64 + 60714840 gct-gtactacttgtg-----ccaccgtgacgcggagctac-caagaggtggagccaggatttgaacccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760507 69 - 106955855 GCT-GTACTACCTGTGCCTCACCACCACGACATGGAGCTAC-CAAGAGGTGGAACAAGGATTTGAAGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048121 70 + 64156825 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073616 70 + 59248254 GCTAATACTACCTGTGCCTCACCACCGTGACATGGagctac-gaagaggtggagccaggatttgaacccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176108 69 + 51301725 GCTAATACTACCTGTGTCTCACCACCGTGACATGGAGCTAC-GAAGAGGTGGAGCCAGAA-TTGAACCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881467 70 + 50890351 GCTAATACTACCTGTGCCTCACCACCGTGACATGGGgctac-gaagaggtggagccaggatttgaacccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464581 66 + 49145316 ACTAATACTACC-GTGCCTCACCACCGCAA-ATGGAGC--C-taagaggacgagccaggatttgaacccaa i calJac3.chr22 I 27 C 0 s canFam3.chr1 102994217 28 + 122678785 ------------------------------------GCTCCTCAAGAGGT-------GGGTTTGAATCCAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3704779 907 + 145441459 I a score=2257962.000000 s hg38.chr19_GL949753v2_alt 181207 532 + 796479 gaagcctgaGGTCAGAAGGCGGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCTTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA s panTro4.chr19 59113728 532 + 63644993 gaagcctgaggtcagaAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAATGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCGGATGGGCACCTGAATCTTCCTCCACCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAATTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991266 533 + 60714840 gaagcctgaggtcagaaggctgagtccgtgtgtccttccactCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCACATCAGGTACCACCTCTGATGGGCACCTGAATCTCCCTCCACCTGCCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCCATCTCCTATGCAGCCCTCGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCGTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCACGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGAGGGGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102760576 532 - 106955855 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGTTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTACAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCACCTGAATCTTCCTCCATCTGCCCCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCCTATGCAGCCCTTGGAGGTGAT--GGGTGTGAACTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCCTGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048191 530 + 64156825 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCAAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGTTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55073686 529 + 59248254 gAAGCCGGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTGTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCA--CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCACTAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176177 530 + 51301725 GAAGCCTGAGGTCAGAAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAAccttcctccacct-cccct-cTGGTGGCTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTGAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46881537 530 + 50890351 gaagcctgaggtcagaAGGCTGAATCAGTGCTTCCTCCCACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGGCGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCATGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGTACCACCTCTGATGGGCGCCCGAACCTTCCTCCGCCT-CCCCT-CCGGTGGGTGCCCTCACTAAGCCTGCTGT-CCTATCTCCTATGCAGCCCTCGGAAGTGAT--GGGTGTGAGCTCACCC-AGAGGGTACAGATTCAC-CCTTGCACACAGCTCACCAGGGAGCTGGGGCAGCCTCATGC----CCCAATAGCCCAGCGCAAGGGTCACTGCGGCTCTAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGTG---TCCCCAGTGGA-GGGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45464647 529 + 49145316 gaagtctgaggtcagaa-gctgAATCCGGGCTTCCTTCTACTCTTCCCAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTAGAGAGACGTCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCACGTGTACTGATCCGCCAGCGCCATATCAGGTATCACCTCTTGTGGGCGCCCAAAGCTTCCTCCACGCTGCTCT-CTGATGGTTGCCCTCACTAAGCCTGCTGTCCCTATCTCC--TGCAGCCCTTGGAGGCGAT--GGGTGTGAGCTCACCC-TGAGGGTACAGATTCAC-CCTTGCACACAGCTCACGCGGGAGCTGGGGCAGCCTCATGT----CCCAAAAGCCCAGCGCAAGGGTCACTGCGGCTCCAGCCGTACACCTTGTGAAGGCCTCTGCCAGGCATGTGGGCAGCTGGACAGGTAACAGCTCTTGGCC---TCCCCGGTGGA-GGGAGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3705686 531 + 145441459 GAAGTCTGAGGTCGG---GCCTCATTGGCTGCTGCTCCCCCTG-TCACAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATTGAGGATTTCTTGGAGAGGCGGCTGCAGACCCAGGTCTTTAAGCTGGGCCTGGCCAAATCTATTCACCATGCCCGTGTGCTCATCCGCCAACGTCACATTAGGTG-AGTTGCAGCTGGGCCTGTAAATCTTTATTTCCCTACTTGTGCCGTTGGTTTCGTTAGCTAAG-TTGCCAT-TCTATCTCCTGTGCAGCCTTTGGAGCTGAC--AGATGTGAGCTTACCCTTGAGGGTTCAGAATCGTGCCCTGCAAACAGCTTATGGGGGACTGGGGACAGCCTTGTTT----CCCCATAGCCCAGCGCAAGGGTCACTGCGGCTCAAGCCGTACACCTTGTGAAGGTGTCTGCCAGGCACTCAAGCAGCTGGACAGGTAACAGCTCTTGGTGCCACCCCCCCTGGA-GGGAGA i mm10.chr7 I 907 I 157 s canFam3.chr1 102994245 518 + 122678785 GATGTCTAAAGT----------GATCAGTGCTTCCTTCCCCTCCTATCAGGTAATGCCCTACTGCGCCGACTTGTACGCATCGGGGTGCTGGATGAGGGCAAAATGAAGTTGGATTACATTCTGGGCCTGAAGATCGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTTAAGCTGGGCTTGGCCAAGTCCATCCACCATGCCCGTGTGCTGATCCGCCAGCGCCATATCAGGTAACACATCTAGGGG---------TCTATCTTCTCCATCCTCC-TTGGTGGTTGCCCTCACTAAGCTTGCTGTCCTTATCCCCTATGCAGCCCTCGGAGGTGACAAAGGTGTGAACACACCT-TGAGGGTACAGATTGAC-ACCTGCAAAGTGCTCATGGGTTGCTGGGGAGAGCCTCATCCCCTGCCCCGTAGCCCAGCGCAAGGGTCACTGCGGCCTAAGCCGTACACCTTGCGAAGGCTTCTA-CAGGCATGCATGCAGCCAGACAGGTAACCGTTCCCGGTG---TGCCTGGTGAA-CAGAGA i canFam3.chr1 C 0 C 0 a score=556289.000000 s hg38.chr19_GL949753v2_alt 181739 195 + 796479 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT s panTro4.chr19 59114260 195 + 63644993 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCGCTTGTGAAGTTGATTCCAGACCCCGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCCTTTCTGTAATGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991799 195 + 60714840 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCGGCTGTCTCCTGGCTTGCTTGTGAAGTCGATTCCAGACCCTGATCCATGACTGCGTTCTGGGTACTCAGTGTGCCATTTCTGTAACGTGGCACCA---------TTGAGGCGGAGGAGCTGTACAGAAAGAGCGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761108 195 - 106955855 GAACCA----GCCTCACCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTGAAGTTGATTCCAGACCCTAATCCATGACTGCATTCTGGGTACTCAGTGTGCCCCTTCTGTAACGTGGCACCA---------TTGAGGGGGAGGAGCTGTACAGAAAGAGGGCAAGATGTTTGCGTTTAGAATCTTCGCCCCAGCCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048721 195 + 64156825 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074215 195 + 59248254 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTCCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTGTACAGGAAGAGGGCAAGATGTTAGCGTTTAGAATCTCCGCCCCAGCCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176707 194 + 51301725 GAACCA----GCCTCTCCTCGCTCGGGTG-----GTGGGTTCAGCTGTCTCCTGACTCGTTTATGAAGCTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCTCTT-CTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTATACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCCTCCCCAGCCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882067 195 + 50890351 GAACCA----GCCTCTCCTCGCTTGGGTG-----GTGGTTTCAGCTGTCTCCTGACTCGTTTATGAAGTTGATTCCAGACCCTAATCCATGACTGCTTTCTGGGTACTCAGTGTGCCCTTTCTGTAACGTGGCACCA---------TTGACGGGGAGGAGCTACACAGGAAGAGGGCAAGATGTTAGCATTTAGAATCTCTGCCCCAGCCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465176 191 + 49145316 GAACCA----GCCT--CCTCACTTGGGTG-----GTGGGTTCAGCTGTCTCCTGGCTCTCTTGTTAAGTCAGTTCCAGACCGTAAGCTGTGAGTGCGTTCTGGGTACTCGG-GTGCCCTTTCTGTAACATGGCACCA---------TTGAGAGGGAGGAGCTGTGCAGG-AGAGGCCACGACGTTTACATGTAGAATATCCACCTCAGCCCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102994763 168 + 122678785 -AGTCATTGGATCTCTACTGGTTTGGGTGGGTGTGTGGGTTCAGTTG------GGCCCACTTGTGGAATC-ATTCAGGAGCCTGGT-GGTTATCGTGTCCTG---ACACACTGT-CCGTGTTGGTGAGTTGACCACAGTCCATGGTCTGATGGTCAAGTGCTG----------GGGC---CTGTGGGAGTCTGG------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706217 157 + 145441459 I a score=721857.000000 s hg38.chr19_GL949753v2_alt 181934 326 + 796479 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGTCAA-TGCT----------TTCGTCGGAGA--CGTAGCCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCTGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCACGATA--TTTCAGACTCGGAACTTGGGGGCTCTCACATGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCAGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGG------AGGGCGCACGTAGGATCAGGTGCACCCTTCCTGCAGC s panTro4.chr19 59114455 328 + 63644993 CACTAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGTCAA-TGCT----------TTCGTCGGAGACGCGTAACCTCGGGTTGCTGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTAACAATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTATCGGATT------TCTCCTATAAAATGGGGT---TGAGAAAGTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCGTAGGATCAGGTGCACCCTTCCTGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55991994 326 + 60714840 CACTAACCCTGTGAGCCATAGGCAGA---GCCTTGTGTGTCAG-TGCT----------TTCGTCGGAGA--CGTAGCCTCGGGTTGCCGTGTTATTGTGGGCATTGCTGCCGCACGT------GGTAATACAGCTCAGTGTCAGGTGTGGGGTTCAGGATA--TTTCAGACTCGGAACTTGGGGGCTCTTACACGGCCATCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTCGGATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGTATT--TTG--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761303 326 - 106955855 CACGAACCCTGTGAGCCGTAGGCAGA---GCCTTGTGTGTCAG-TGCT----------TTCGTCGGAGA--CGTAGCCTCGGGTTGCTGCGTTATTGTGGGCATTGCTGCCGCGCGT------GGTAATACAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTTGGGGGTTCTTACACGGCCACCTCATTTGCTTTGTAGTCTTAGGT------GGGAT-----------------------------GCTTTTGAATT------TCTCCTATAAAATGGGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTAAAACCCCGA------AGGGTGCCCATAGGATCAGGTGCACCCTTCCCGCAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60048916 315 + 64156825 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGTCAG----------------------------CGTAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCGTT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074410 315 + 59248254 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGTCAG----------------------------CGTAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCGGCCGCCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAGTT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47176901 315 + 51301725 CACTAAGCCTGTGAGCCGCAGGCAGA---GCGTCGTGTGTCAG----------------------------CGTAGCCCCGGGTTGCTGTGCTGTTGTGGGCATTGCTGCCGCACGT------GGTAATGCAGCTCAGTGTCAGGCGTGGGGTTCAGGATG--CTTCAGACTCGGAACTT--GGGCTCTTCTTCGGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCACC----TGAAGCATT--TTT--GGGGGTTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882262 314 + 50890351 CACTAAGCCTGTGAGCCGCAGGCAGA---GCCTCGTGTGTCAG----------------------------TGTATCCCCGCGTTGCCGTGCTTTTGTGGGCATTGCTGCTGCACCT------GGTAATGCAGCTCAGTGTCAGG-ATGGGGTTCAGGATG--TTTCAGACTCGGAACTT--GGGCTCTTATTCAGCCACCTCATTTGCTTTGTGGTCTTAGGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCTAGAAAATGTGGT---TGAGAAACTCATC----TGAAGCATT--TTT--GGGGATTAAGGTGATACCCTCAAACCCTGGACTCACATGAGGCCCATAGGATCAGGAGCGCCCTTCCCACAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465367 307 + 49145316 CACTAACCCTGTGAGCCGTGGGCAGA---GCCTTCTGTGTGTGACGCC----------TTCACTGTGGA--CATAGCCTCAGGTTGCTGTGTTACAGTGGGCATTGCTGCCGTGTGT------GGTCA---AGCTCAGTGCCAGGTGTGGGGTTGAG--TG--TTTCACACTTCGGACTT--------TTAAT--GCCACCTCATTTGCGTTGTGGTCTTATGT------GGGAT-----------------------------ACTTTTGAATT------TCTCCT---AAATGTGGT---TGAGA--------------AAGCATT--TTTGGGGGGGTGAAGGTGATGCCCTAAGACCCTGGACTCACATGAGGCCCACAGGATCAGGAGCGCCCTTCCGGCAGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3706374 194 + 145441459 CACCAATCATGACAGCTATA--CAGA---G-----------------------------------------TGAAGTCTCAGATTTCTTTCTCACCA--------GCTTTCGTTTAT------GG---------------------GCAGAGAT----------------------------GTACTCTT--------GTCTGAGGTGGTTTGAGACC--ACAT------GGCAT-----------------------------------------------------TACAATGTGGA---CAGGAAGCAAATC-----AAAGCATTAGTAT--GGGCACTCTTGTTTTCCTTCCAAGTTACTGAGTC------------TGAGGTCAGG--------------AGT i mm10.chr7 I 157 C 0 s canFam3.chr1 102994931 383 + 122678785 --CTGGCTCAAGAAGACA-GGGCAGATGGGTCTTTTATCTGGG-TGCTCAGTTTGACCTTTGTCAGATTT-TGTAGACTGGAGTCTCAG----GTGAAGGACAGTAAGGCTGCTCCTTAGATAGATAGTAAAGCCCAGTGTCTGGCAC--ACTTCACTTTGAAAATCAGACCCTGGAATTACTGGCTGCCACT-GGCTCCCCTCCTTCCTTTGTGGTCTTGAGTTCCTCCTGAATGCATCCACAATGCAAACCAGAAGCTCCACACGTTTGAGTTCAGTGATATTCTAAAACTTgggatccctgggtggcgcagcggtttggcgcctg--cct--ttggcccagggcgtgatcctgaagacccgggatc----gaatcccac---atcggg--ctccctgcatggagc i canFam3.chr1 C 0 I 159 a score=234579.000000 s hg38.chr19_GL949753v2_alt 182260 96 + 796479 GCCTTGGTGTCT------------GCAGCCGTGGCGGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCGGTAGCTGGGGTTAGCGTCCGTTTCTCCTCCAGTCCA s panTro4.chr19 59114783 96 + 63644993 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACGGGGTGGGTGGAGAGGAAAGAGTGGTGCCGTAGCTGGGGTTGGCGTCCGTTTCTCCTCCAGTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992320 96 + 60714840 GCCTTGGTGTCT------------GCGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAAAGAGTGGTGGCTTAGCTGGGGTTAGCGTCCGCTTTTCCTCCAGTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761629 93 - 106955855 GCCTTGGTGTCT------------GCAGCCATGGCAGCCTCACAGCGTGGGTGAAGAGGAGAGAGTGGTGCCTTAGCTGGGGTTAGCGTCCGTTT---CTCCAGTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049231 96 + 64156825 GCCTCCGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074725 96 + 59248254 GCCTTGGTGTCT------------GTGGCCATGGCAGCCTCATGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177216 96 + 51301725 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGAGGAGAGAGTGGTGCCTGAGCTGGGGTTAGCATCCGTTTCTCCTCCAGTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882576 96 + 50890351 GCCTCGGTGTCT------------GTGGCCATGGCAGCCTCACGGGGTGGGTGAAGACGAGAGAGTGGTGCCTGAGCTGGGGTTAGCGTCTGTTTCTCCTCCAGTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465674 99 + 49145316 GCCTGGGTGTCTGCAACCCTAGCAGCAGCCGTGGCCACCTCACGGGCTGAGTGAAGAGGAGA----GGCACCTC-GCTGGGCTT-GCTTCATTCT---CCCCGGTCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3706568 59 + 145441459 GCCTGTGAGCCT------------GC----------------TTGAGTCAAAGGGCAGGACCAAATGGT-------------TCAGCCTCACTTT--------GTCCC i mm10.chr7 C 0 C 0 e canFam3.chr1 102995314 159 + 122678785 I a score=1213060.000000 s hg38.chr19_GL949753v2_alt 182356 293 + 796479 CCTCACCTTGTCG--CTTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCTCTC s panTro4.chr19 59114879 293 + 63644993 CTTCACCTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGTTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992416 293 + 60714840 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGT-CCACCTGTC--CCTCCT-----GGGCTGCTG------GATTGTCTCGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102761722 299 - 106955855 CTTCACTTTGTCA--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGTGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAAC-CCACTTGTC--CCTCCT-----GGGCTGCTGGATTGTGATTGTCTTGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGGGGGTCTCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049327 293 + 64156825 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCAGCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ATTGGTGTGTGTGGGTGTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55074821 293 + 59248254 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCGTTCATTGTCCGCCTGGATTCCCAGAAGCACATTGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------ACTGGTGTGTGTGGGTGTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177312 293 + 51301725 CTTCACTTTGTCG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCCGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTCTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------Gttggtgtgtgtgggtgtctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882672 293 + 50890351 CTTCACTTTGTTG--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAATATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGC-CCACCTTTC--CCTCCT-----GGGCTGCTG------GATTGTGTAGTTTTCCTGCC---AAATAAACAGGATCAGCGCTT--TACA-------GTTGGTGTGTGTGGTTGTCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45465773 294 + 49145316 CTTAACC-CGTCC--CCTCTTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCCCTCCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGTCAGGGCGGGGCTGGGGCTGGGGATGACGAGGAGGAGGATTAAGC-CCACCTGTCCGCCTCTG-----GGGCTCGTG------GATTGCCGAGTTTTCCTGCT---GAATAAACAGGATCAGCGCTTTATATA-------CTTGGTGTGTTTG--TGTCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3706627 286 + 145441459 CTTATTCTGTTCT--TCCTGTCCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTTCGCCTGGACTCTCAGAAGCACATCGACTTCTCCCTCCGTTCTCCTTATGGCGGCGGCCGTCCAGGCCGAGTGAAGAGGAAGAATGCCAAGAAAGGCCAGGGCGGGGCTGGAGCTGGTGATGATGAGGAAGAGGATTAATTAATACTTGGC-------T-----GAACTGGAG------GATTGTCTAGTTTTCCAGCTGAAAAATAAAAAAGA------ATT--GATA-------CTTGGTTTATTGGTGTGCCTC i mm10.chr7 C 0 I 5733 s canFam3.chr1 102995473 303 + 122678785 CCTCACC-TGCCATCCCCCCTCCAGGGTCCGAAAGCAGGTAGTGAACATCCCGTCCTTCATTGTCCGCCTGGACTCCCAGAAGCACATCGACTTCTCCCTCCGTTCTCCGTATGGGGGTGGCCGCCCAGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGAGCCGGTGATGACGAAGAGGAGGACTGAAC-CCACCCTTC--CATCCCTTTCAGGGCCCGTG------GATTATCTAGTTTTCTAGGC---CAATAATAA--AACAGTGTTT--TGGAATCGTTTATTGGTTTATTGGTGTGTCT- i canFam3.chr1 I 159 C 0 a score=40874.000000 s hg38.chr19_GL949753v2_alt 182649 59 + 796479 ATCCTTGACTCTTTCCCCTGCTCTAAACATGCAGCCTTCCCTGGGA------------GGCTCACTC------------------ACTT s panTro4.chr19 59115172 71 + 63644993 CTCTTTGACTCTTTCCCC-GCTCTAAACATGCAGCCTTCCCTGGGA------------GGCTCACTCACTTCAGGGT-----GATACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55992709 59 + 60714840 CTCCTAGACTCTTTCCCCTGCTGTAAACATGCAGCCTTCCCTGGGA------------GGCTCACTC------------------ACTT i ponAbe2.chr19 C 0 I 733 s nomLeu3.chr10 102762021 29 - 106955855 CTC-------------------------------------------------------GGCTCACTCTCTTCCGGGT-----GATACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60049620 48 + 64156825 CTT-----GACTCTCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA------------GGCTCAG------------------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075114 48 + 59248254 CTT-----GACTCTCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA------------GGCTCAG------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177605 48 + 51301725 CTT-----GACTCTCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA------------GGCTCAG------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46882965 48 + 50890351 CTT-----GCCTCTCCCCTGCTCTGAACATGCAGCCTTCCCTGGGA------------GGCTCAG------------------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466067 87 + 49145316 CTCCTTGACTCTTAACCCTGCTCTGACCTTGCCGCCTTTCCTAGGAAGCTTGG--GGCAGCTCACTCGCTTCTGGGTGTTGAGGTGCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995776 60 + 122678785 ---------------CCCTGTTCTGAACATACAGCTCCCTGTGGTGGGAAAAAATGATGGCTGGGTCCTCCAACC-------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=33766.000000 s hg38.chr19_GL949753v2_alt 182708 13 + 796479 GGGAGTGCCTACC- s panTro4.chr19 59115243 13 + 63644993 GGGAGTGCCTACC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993501 13 + 60714840 GGGAGTGCCTACC- i ponAbe2.chr19 I 733 C 0 s nomLeu3.chr10 102762050 13 - 106955855 GGGAGTGCCTACC- i nomLeu3.chr10 C 0 M 276 s rheMac3.chr19 60049668 13 + 64156825 GAGCGTGCCTACC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075162 13 + 59248254 GAGCGTGCCTACC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177653 13 + 51301725 GAGCGTGCCTACC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883013 13 + 50890351 GAGCGTGCCTGCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466154 13 + 49145316 GGGAATGCCTACC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995836 11 + 122678785 ---AGGACCCTCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=163226.000000 s hg38.chr19_GL949753v2_alt 182721 106 + 796479 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAGTGGTATTTTTGGAAAAAC s panTro4.chr19 59115256 106 + 63644993 AGCTAGTGGTCCCTGGCCT-------------CTCAGTACTA---TTCTACAGTAGTGAAC-ATACATCTTTACCAGAAACTTCTGTCATCAGGGGAGAGACGAATGGTATTTTTGGAAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993514 106 + 60714840 ACCTAGTGGTCCCTGGCCT-------------CTCCGTACTG---TTCTGCAGTAGTGAAC-ACACATCTTTACCAGAAACTTCTGTCATCACGGGAGAGACGAATGGTATTTTTGGAAAAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60049681 107 + 64156825 AGACAGTGGTCCCCGGCCT-------------CACAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i rheMac3.chr19 C 0 I 321 s macFas5.chr19 55075175 107 + 59248254 AGACAGTGGTCCCCGGCCT-------------CGCAGTACTACTCTTCCACAGTGGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177666 107 + 51301725 AGACAGTGGTCCCCGGCCT-------------CTCAGTACTACTCTTCCACAGTACTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883026 107 + 50890351 AGACAGTGGTCCCCAGCCT-------------CTCAGTACTACTCTTCCACAGTCGTGAAC---ACATGTTTACCAGAAGCTTCTGTCATCAGGGGAGAGACCAATGGTCTTTTGGGAAAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466167 65 + 49145316 AGATGGTGGGCCCTGGCCT---------------CAGTAATG-----------------------------------------CTGTCATCAGCAGAGAGAC--ACGGTATCTTGGGAAAAAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995847 103 + 122678785 AGCAGGTGGTCCTTGTTCCTTGTTCCTTGGGGCATGGGTATAATCTGGTACACTCCTGAGCAACACAAACACACC---ACTTCCTTATTTCAGTGGGGATGCCAGC----------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=849.000000 s hg38.chr19_GL949753v2_alt 182827 6 + 796479 TGTGTC s panTro4.chr19 59115362 6 + 63644993 TGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993620 6 + 60714840 TGAGTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55075282 4 + 59248254 --AGTC i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47177773 4 + 51301725 --AGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883133 4 + 50890351 --AGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102995950 4 + 122678785 TGTG-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e calJac3.chr22 45466232 0 + 49145316 C e nomLeu3.chr10 102762063 276 - 106955855 M e rheMac3.chr19 60049788 321 + 64156825 I a score=74474.000000 s hg38.chr19_GL949753v2_alt 182833 31 + 796479 AAAACCAGAAGGAAATTCCAAGTAAGCCGGT- s panTro4.chr19 59115368 31 + 63644993 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993626 31 + 60714840 AAAACCAGAAGGAAATTCCAAGTAAGCCGGC- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60050109 31 + 64156825 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i rheMac3.chr19 I 321 C 0 s macFas5.chr19 55075623 31 + 59248254 aaaaCCAGATGGAAATTCCAAGTAAGCCGGC- i macFas5.chr19 I 337 C 0 s papAnu2.chr19 47177777 31 + 51301725 AAAACCAGATGGAAATTCCAAGTAAGCCGGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883137 31 + 50890351 AAAACCAGATGGAAATTCCAAGTAAGCCGGT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466232 29 + 49145316 --AGCCAGAAGGAAATTCCAAGTAAGCCAGC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995954 25 + 122678785 ----CTAGGGGGAAGTTCT---CAAGCCACCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3706913 5733 + 145441459 I e nomLeu3.chr10 102762063 276 - 106955855 M a score=1527873.000000 s hg38.chr19_GL949753v2_alt 182864 597 + 796479 GTTTGCATATAGGGGTGGGAGGGAGCCGGTCATTGCTAGGCAGGGCAGGCGCCGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCAGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTGGTGA-------TTGTTGGGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGTTCCTCCTCTCCGCGTTCAGTGCTTCTGTGGACTCA--CGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTCAAGCTAGG s panTro4.chr19 59115399 597 + 63644993 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCATTGCTAGGCAGGGCAGGTGCTGAGTGGAGGTGGG--GGCCTTCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CAGAGGCTGA-CAGGTTGCTGGGGAAGG---TG-AACTGTTGGTGATTG----TTGTTGGGGAACACTTCACAGAATTTGCTTGCTAGTTTCAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGAGAAGGGGCGTTGAGGGAAGTCTGT---TCCTCTCCGTGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCGTTTTCTCAGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACCCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGGGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTGAACCACGCGGAGAATC----CCATTGCGGCTTACTCGAGCTAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55993657 598 + 60714840 GTTTGCATATAGGGGTGGGAGGGAGCCAGTCGTTGCTAGGCAGGGCAAGCGCCGAGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCGCCGGGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGGCTGA-CGGGTTGCTGGGGAAGG---TG-AACTGTTAGTGATTG----TTGTTGGGGAGCACTTCACAGAATTTGCTTGCTAGTTTTAAAGC----TTGTGATGCGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTAGGTTAGCGTAGGGGAAGGGTCGTTAAGGGAACTCTGTTCCTCCTCTCCGCGTTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGTCTTGTTGATCATC--TGTT---------GGGGAGGGGTTTGGTTTCTGAGGAAGTGAGAAGCCTGAAATTGTGCAACCCTCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTAAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCTTACTTGAGCTAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102762339 598 - 106955855 GTTTGCATATAGGGGTGGGAGGGAGCCAGTGATTGCTAGGCAGGGCAGGTGCCACGTGGAGGTGGG--GGCCTGCCCTGCCTGCTGGCCCTGGGACCCTGACCCCACCCAGCAAGAGACAGGT--GGGACGGGAGCTGAC--CTGAGTCTGA-CGGGTTGTTGGGGAAGGTGATG-AACTATTAGTGA-------TTGTTGGGGAGCACTTCACAGAATTTGCTTGTTAGTTTCAAAGC----TTGTGATGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACATGTAGGGGAAGTGGGTTAGCGTAGGGGAAGGGGCGTTGAGGGAA--CTGTTCGTCCTATCCACGGTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTTCTGAGGAAGTGAGAAACCTGAAATTGTGCAACTCCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTATCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGACAGTTCTGGAACACAGCTGAGTTACT--------GTAAACCACGTGGAGAAGT----CCATTGCGGCCGACTCGAGCTAGG i nomLeu3.chr10 M 276 C 0 s rheMac3.chr19 60050140 591 + 64156825 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTTGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCCTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAACCTTGAACTTGGGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCGGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55075654 591 + 59248254 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGACGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CGGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTCCCAGTTTTGTCTTCACACGTAGGGGAAGTGGGTTTGTGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCTGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGT---GAAGT----CCACTGCCGCTTACTCGAGCTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47177808 594 + 51301725 GTTTGCATGTAGGGGCGGGAGGGAGCCTGTCGATGCCAGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCCGTCCTGCCTg-tggccctgggaccctgacCCTGCCCAGCAAGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGATGG---TG-AACTGTTAGTGACTG-TTTTTGTTGGGGAGCACTTCACTGAATTTGC----CAGTTTCAAAGCTTGTTTGTGTTGTGGTTGATGTTGGGCAAGTTTCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCATGTAGGGGAAGGGGCATTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGGCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGTTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTTGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAAACCACGTGGAGAAGT----CCACTGCCGCTTACTCGAGCTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883168 594 + 50890351 GTTTGCTTATAGGGGTGGGAGGGAGCCTGTCGATGCTGGGCAGGGGAGGCAGCAAGTGGAGGTGGG--GGCCTGTCCTGCCTG-TGGCCCTGGGACCCTGACCCCGCCCAGCAGGAGACAGGT--GGGGC-AGAGCTGGC--CTGAGACT-----GGTTGCTGGGGAAGG---TG-AACTGTTAGTGACTC-TTTTTGTTGGGGAGCACTTCACCGAATTTGC----CAGTTTCAAAGCTTGTTTGTGATGTGGTTGATGTTGGGCAAGTTCCCGGTTTTGTCTTCACATGTAGGGGAAGTGGGTTCGTGTAGGGGAAGGGGCGTTGAGGGAA--CTCTTCCTCCTATCCGCATTTGGTGCTTCTGTGGACTCA--TGGTCAAGAGGTTGGCAGGCTTCCCTTTTCTCGCCCTTGTTGATCATCTGTGTT---------GGGAAGGGGTTTGGTTGCTGAGGAAGTGAGAAACTTGAACTTGTGCAAC-CCCTCAGG--------------------CTGCAGGCTGTAGCTGATTGGGTCCTTGTCTG--------GAGGCCTTCAGGG------------TTGGAGGTCAGTGCAGGGATGGCTCTGGAACACAGCTGAGTTGCT--------GTAGACCACGCGGAGAAAT----CCACTGCCGCTTACTCGAGCTAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466261 561 + 49145316 GTTTGCATATA-GGGTAGAAGGGAGTTGTTCATTTCCAGGCAGGGGATGCAGC--GTGCAGGT-GG--GGCCTGCCCTGGCTGTTGGCCCTTTGACCCTGACCCGG-------GGAGAGAAGT--GGGCTGGGAGCTGACCTCTGAGGCTGGCCTGGTTTTTGGGGAAGG---TG-GACTGTTGGTGG-TG-ATTTCGCTGGGCAGCACTTCATAGAA-CTGCGGGCTCGTGTCGGAGC----TCGTGATGTGGGTGATGCTGGGCAAGTTCCCAGCTTTGTCTTCACTCCGAGGGGAAGTCGGTTGGTGT-GGGGGAGGGGTGTTGAGGGAA--CTCTTCCTCCTACCCACGCTTGGT--TTCTGTGGACTCA--TGGTCAGGAGGTT---AGGCTTCCGTTTTCTCTGCCTTGTTGATAAGCTGTGTC---------GGGATGGGG-TTGGTCTCTGAGGAAGTGAGAAACTTGAAACTGTGCAACCTTCT---------------------------CAGGCCCTAGTCGCTGGGGTTCTTGTCTA--------GAGGCCTTCAGTC------------TTTGAGGG---------------TCAGGGGCGCAGCTGAGTT-CT--------GTAAACCCTGCAGAGCAGTCAGCCCACTGCAGCTT----GAGCTAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102995979 577 + 122678785 ATTTGCATGGTGGTGAGCGAGGGA---------------GCAGGGAAAGTG-TGGGTGGAGGTTGGTTGGCATGGTCAACC---CAGCCCT-----TCTAGCCTTGGCAAAAAGAAGTCGGGTTCAGGTTGGCAACTGAGCGCTGAACCT---TGGGTTACAAGTGAGAA---TGAAACAGTT--TAATTGGGTTTTGCTGGGGAGCATTGGACAGGAAGGACAGGCCAGTTTCAAAGC----TTATTTCG--------------------------------------------------------GTGTGGGGAAAATGGC--TGAGGCACCCTGCTCCATCCCCCCTGCATCTGGAG--TTTGTGAACCCAGTGAGTCAGGAAGAAGACTGGCTTCCATTTTCTCTGTCTTGCTGAGAAGTTGGATCAGGCAGAGGAGGAAGGGGCTTGGTCTCAGGAAACACAAAGCCCTTGGCATTGAGCAAC-CCCTCATGGGCTGTGGCACTGCTGAGCTCTGAGGTCAGTGATGGCCTGGGACGCTGCCAGGCTGCCATGGAGCCTGCAGGAGGTCCCCAGTCCTTCCAGCTTAGTGCTGG----GTTCCCCCACGCCACAAGGTTACCATGTGGTAATAAATGATGTTAGCATTT----CCTTGGCATCTTACAGAAACTAAG i canFam3.chr1 C 0 I 63 e mm10.chr7 3706913 5733 + 145441459 I a score=168512.000000 s hg38.chr19_GL949753v2_alt 183461 83 + 796479 TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGACGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT s panTro4.chr19 59115996 83 + 63644993 TGGTTGGCCCTT-CCTTCCCTCAGCGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994255 83 + 60714840 TGGTTGGCCCTT-CCTTCCCTCAGGGTTGCTACTTGGG--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102762937 79 - 106955855 TGGTTGGC-----CCTTCCCTCAGGGTTGCTACTTGGA--AAATGATGGTGGTCTTGT-----GTCCATGGGGCCAGCTGCTGCACCGTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60050731 78 + 64156825 TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGA---TGGTCTTGTTGGATGTCCATGGGGCCAGCTGCTGCAGCGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076245 81 + 59248254 TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTGGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178402 81 + 51301725 TGG-TGGC-----CCTTCCCTC--GGTTGCTACTTGGG--AAGTGATGGTGGTCTTGTTCGACGTCCATGGGGCCAGCTGCTGCAGCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883762 49 + 50890351 TGG-TGGC-----CCTTCCCTC--GGTTGCTA----------------------------------CATGGGGCCAGCTGCTGCACCGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466822 84 + 49145316 TGGGCAGC-----CCTTCTCTCCGGGTTGCCACTTGGG--AAATGATGGTGGTCTTGTTGGACGTTCACGGGGCCAGCTGCTGCACCTTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102996619 73 + 122678785 TGG-TGGTCCTTGTCCTGCCTCCAGGCTG--GCTGGGGTCAAGTGGTA-----CCTGC----------TGTGAGCAGCTCCTGTGCCTTCC i canFam3.chr1 I 63 C 0 e mm10.chr7 3706913 5733 + 145441459 I a score=629789.000000 s hg38.chr19_GL949753v2_alt 183544 225 + 796479 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGG-----------GT-CTGGGCTAGTGGATGGCCGGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG s panTro4.chr19 59116079 236 + 63644993 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTACTCACTGGGCTC--CTGGGAGCTCC----CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAA-TTGC-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTGGGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994338 221 + 60714840 GGGCTCACTGT----GGT---CTT---CCTTGGAGTGTGGGGTCTGGGTCTTGT-CTGGACTAGTGGATGGCCAGGGCAGCCTACTCACTGGGCT------------------CC----TGGGAGGAAGAGACTGCAGTTGTCTCTGGTCTGAGAG---GT---GGCAGCTCACCTGGGTGTAGCTCGCAA-TTGT-GGAGCTCCA----CGGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGCGGTT---CTCGGGAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763016 235 - 106955855 GGGCTCACTGT----GGTCTCCTT---CCTTGGAGCATGGCGTCTGGGTCTTGT-CTGGGCTAGTGGATGGCCAGGGCAGCGTATTCACTGGGCTC--CTGGGGGCTCC----CC----TGGGAGGAAGAGA---CAGTTG--TCTGGTCT-AGAG---GT---GGTGGCTCACCTGGGTGTAGCTCACAATTTGT-GGAGTTCCAGATGCAGCAGCCTGGAGGGAGGGGAGAGTGGGAGTTGAGGTATGTGGTT---CTGGGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60050809 234 + 64156825 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGGGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGGGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076326 232 + 59248254 GGGCTCACTGT----GGT---CTT---GCTTGGACCGTGGGGTCTGGGTCTTGT-GTGGGCTCGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGA--GTGCAGTTG--TCTGGTGT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCCCCC------AGAGCTCCAGATGCAGCCGCCTGGAGGGGGAGAGGAGTGGGAGGTGAGGCGTGCGGTTCTGCTGGGGAGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178483 234 + 51301725 GGGCTCACTGT----GGT---CTT---GCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCACTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGGTG--TCTGGTCT--GAG---GT---GGTGGCCCACCTGGGTGTAGCTCACCC------AGAGCTCCAGATGCAGCCgcctggagggagagaggagtaGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46883811 234 + 50890351 GGGCTCACTGT----GGT---CTT---CCTTGGAGCGTGGGGTCTGGGTCTTGT-GTGGGCTAGTGGATGGCCAGGGCAGCGTAGTCATTGGGCTCCTCTGGGAGCTCC----CC----TGGGAGGAAGAGAGTGCAGTTG--TCTGGTCT--GAG---GT---GGTGGCTCACCTGGGCGTAGCTCACCC------AGAGCTCCAGATGCAGCAGCCTGGAGGGAGAGAGGAGTGGGAGGTGAGGTATGCGGTTCTGCTGGGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45466906 214 + 49145316 GGGGTCACCGT----GGT---CT------TTGGAGCGTGGGGTCTGGGTCTTGTCCTGGCCTAGTGGATGGCCAGAGCAGCGGATTCACTGGGCTC------------C----CT----TGGGAGGAAGAAAGTGCAGTTGCCTCTAGTCTGAGAT---CT---GGTGGCTCATCTGGGTGCAGCTCACATCTTATGGGAGTTCCAGATGCAGCAGCCTGGAGGGAGGG-------------GAGGGATGTGGTT---CTGTGGAGAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3712646 232 + 145441459 GGGGTCATTG-----------CTC---CAT--GTCCTTGGGAACAG-----CCT-CTGGACGAGCAGCC-GCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCC----TGGGAGAGAGGAGATGCAGCTGCCCCCTGTCT--GAGTGTCC---TGCTGCACAGCTGGGCATAGGTCACATCCTGG-GACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGG-GTGAGAGA-AAGGTATGTGATT-TGCTTGGG-GAAA i mm10.chr7 I 5733 C 0 s canFam3.chr1 102996692 243 + 122678785 GGGGTCCCTGTAGGGAGT---CTTAAGACCTCGAGTGTGGGGTCTGGGTCCT-T-CTGGGCTAGTAGAAGGCCAGAGCAGCATACACACTGGGCTCCTCTGGGGGCTCC----TCTGATTGGGAGGGAGAGGATGCACTTGTTTCCTGTCG--GAG---GGTCAGATGGTTCAGTTGGATATAGATCACATCTTGC-TGGTCCTCAGATATAGCCACCTGGAGCAGGGGGAGAGGA------AAGGCACGTGG-----CTGAGAAGAGG i canFam3.chr1 C 0 I 3199 a score=37203.000000 s hg38.chr19_GL949753v2_alt 183769 15 + 796479 CCTACGGGCTTGGAA s panTro4.chr19 59116315 15 + 63644993 CCTACGGGCTTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994559 15 + 60714840 CCTACGGGCTTGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763251 15 - 106955855 CCTATGGGCCTGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051043 14 + 64156825 CCTGCAGGCTTGGG- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076558 14 + 59248254 CCCACAGGCTGGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178717 15 + 51301725 CCTACAGGCTTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884045 15 + 50890351 CCTACAGGCTTGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467120 15 + 49145316 CCTACCGGCTTGGGA i calJac3.chr22 C 0 I 203 s mm10.chr7 3712878 15 + 145441459 CCTGCAGGTCTGTGG i mm10.chr7 C 0 C 0 e canFam3.chr1 102996935 3199 + 122678785 I a score=20962.000000 s hg38.chr19_GL949753v2_alt 183784 8 + 796479 AGGAAAAG s panTro4.chr19 59116330 8 + 63644993 AGGAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994574 8 + 60714840 AGGAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763266 8 - 106955855 AGGAAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051057 8 + 64156825 AGGAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076572 8 + 59248254 AGGAAACG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178732 8 + 51301725 AGGAAACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884060 8 + 50890351 AGGAAACG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712893 8 + 145441459 AGGACAGG i mm10.chr7 C 0 I 3546 e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=120614.000000 s hg38.chr19_GL949753v2_alt 183792 65 + 796479 GG------TCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA s panTro4.chr19 59116338 63 + 63644993 GG------TCTTCAGGGCTCTG--TACAGAGGCAGCGAGCGGGGCAACAGAG---GGAGACTCCATCTCAAG--------------------------------------------------AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994582 71 + 60714840 GGTCTTCATCTTCAGGGCTCTGTCTACAGAGGCAGCGAGCGGGGCAACGGAG---GGAGACTCCATCTCAAA--------------------------------------------------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763274 120 - 106955855 GGTCTTCATC-TCAGGGCTCTGTCTACAGAGGCAGCGAACGGGGCAACAGAG---GGAGACTCCAGCTCAGGGCTCTGTCTACAGAGGTGGCGAGCGGGGCAACAGAGAGAGACTCCAGCTCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051065 73 + 64156825 GGTCTTCATCTTCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076580 73 + 59248254 GGTCTTCATCTGCAGGGCTCTGTGAACAGAGGCAGCGAGT-GGGCAACAGAGGGAGGAGACTCCGTCTCGAA--------------------------------------------------AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178740 74 + 51301725 GGTCTTCATCTTCAGGGCTCTGCGTACAGAGGCAGCGAGTGGGGCAACAGAGggaggagactccatctcgaa--------------------------------------------------aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884068 74 + 50890351 CGTCTTCATCTTCAGGGCTTTGCCTACAGAGGCAGCGAGTGGGGCAACAGAGGGAGGAGACTCCATCTCGAA--------------------------------------------------AA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I e calJac3.chr22 45467135 203 + 49145316 I a score=304076.000000 s hg38.chr19_GL949753v2_alt 183857 115 + 796479 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc s panTro4.chr19 59116401 115 + 63644993 tttgtagagatggagtctcaatgtgttgccccggctgatctaaaaccct----tggcctcacgcaatccaccc------gcctcccaaagcactaggatgacaggtgtgggccacagtgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994653 115 + 60714840 tttgtagagatggggtctcaatgtgttgccccggctgatctaaaactct----tggcctcaagcaatccactc------gcctcccaaagcgctaggatgacaggtgcgagccacagtgcctggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763394 115 - 106955855 tttgtagagatggggtctcactgtgttgccccggctgatctaaaactct----tggcctcaagcaatccaccc------gcctcccaaagcgctaggatgacaggtgtgagccacagtgcctggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051138 114 + 64156825 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076653 114 + 59248254 tttgtagagacga-gtctcactgtgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacagtgcccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178814 114 + 51301725 tttgtagagacgg-gtctcactatgttgccctggctgatctcaaactct----tggcctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccacaatgcccggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884142 118 + 50890351 tttgtagagacgg-gtctcaccatgttgccctggctgatctcaagcaatccacccacctcaagcaatccaccc------acctcccaaagtgctaggatgacaggtgtgagccgcagtgcccggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467338 119 + 49145316 ttagtagagacggggtttcaccatgttgaccaggatggtctcgatctct----tgacctc--gtgatccacctgcctcggcctcccaaagtgctgggattataggcatgagccaccgtgcccggc i calJac3.chr22 I 203 C 0 e mm10.chr7 3712901 3546 + 145441459 I e canFam3.chr1 102996935 3199 + 122678785 I a score=4500.000000 s hg38.chr19_GL949753v2_alt 183972 1 + 796479 c s panTro4.chr19 59116516 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994768 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763509 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051252 1 + 64156825 c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076767 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178928 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884260 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467457 1 + 49145316 c i calJac3.chr22 C 0 I 54 s canFam3.chr1 103000134 1 + 122678785 C i canFam3.chr1 I 3199 C 0 e mm10.chr7 3712901 3546 + 145441459 I a score=46133.000000 s hg38.chr19_GL949753v2_alt 183973 20 + 796479 TGCGTGGGTCTGTTTAATCT s panTro4.chr19 59116517 20 + 63644993 TGCGTGGGTCTGTTTAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994769 12 + 60714840 TGCGTGGGTCTG-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763510 20 - 106955855 TGCATGGGTCTGTTTAATCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051253 20 + 64156825 TGCGTGGGTCTGTTTAATCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076768 20 + 59248254 TGCGTGGGTCTGTTTAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178929 20 + 51301725 tGCGTGGGTCTGTTTAATCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884261 20 + 50890351 TGCTTGGGTCTGTTTAATCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103000135 20 + 122678785 TGAGTGGATGTCCTTCATCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e calJac3.chr22 45467458 54 + 49145316 I a score=11340.000000 s hg38.chr19_GL949753v2_alt 183993 6 + 796479 CCGGGC s panTro4.chr19 59116537 6 + 63644993 CCGGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102763530 6 - 106955855 CCGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051273 6 + 64156825 GCGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076788 6 + 59248254 GCGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47178949 6 + 51301725 CCGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884281 6 + 50890351 CTGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467512 6 + 49145316 CCTGGC i calJac3.chr22 I 54 C 0 s canFam3.chr1 103000155 6 + 122678785 CCATGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3712901 3546 + 145441459 I e ponAbe2.chr19 55994781 0 + 60714840 C a score=108917.000000 s hg38.chr19_GL949753v2_alt 183999 38 + 796479 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC s panTro4.chr19 59116543 38 + 63644993 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994781 35 + 60714840 ----TTGCTCTCCCTTTCTTGG-TGAT-----CTCCTTGGATCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102763536 38 - 106955855 CT-CTTGCTCTCCCTTTCTTGG-TGAT-----TTCCTTGGACCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051279 38 + 64156825 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i rheMac3.chr19 C 0 I 43 s macFas5.chr19 55076794 38 + 59248254 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47178955 38 + 51301725 CT-CTTGCTCCCCCTTTCTTGG-TGAT-----CTCCTTGGACCAC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46884287 38 + 50890351 CT-CTTGCTCCCCCTTCCTTGG-TGAT-----CTCCTTGGACCAC i chlSab2.chr6 C 0 I 46 s calJac3.chr22 45467518 39 + 49145316 CTGCTGGGTCTCCCTTTCCTGG-TGAG-----CTCCTTCGACCAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3716447 38 + 145441459 CT-CCTGTTCTCATCTTCTT-G-TGATCAATCCTGCTTAGG---- i mm10.chr7 I 3546 C 0 s canFam3.chr1 103000161 39 + 122678785 CC-CTCACCGGCCATTTTTCAGCCCCT-----GTCCCTAGAACAT i canFam3.chr1 C 0 C 0 a score=24858.000000 s hg38.chr19_GL949753v2_alt 184037 23 + 796479 ATCCCTGTAT-CATTCT-----------------CTCTCTC- s panTro4.chr19 59116581 23 + 63644993 TTCCCCGTAT-CATTCT-----------------CTCCCTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994816 23 + 60714840 TGCCCCGTAT-CATTCT-----------------CTCTCTC- i ponAbe2.chr19 C 0 I 19 s nomLeu3.chr10 102763574 23 - 106955855 TTCCCTGTAT-CATTCA-----------------CTCCCTC- i nomLeu3.chr10 C 0 I 19 s macFas5.chr19 55076833 23 + 59248254 GCCCCCATCT-CATTTT-----------------CTCCCTC- i macFas5.chr19 I 1 I 19 s papAnu2.chr19 47178994 22 + 51301725 GCCCCCATC--CATTTT-----------------CTCCCTC- i papAnu2.chr19 I 1 I 19 s calJac3.chr22 45467557 23 + 49145316 TGCCCCATCT-CATTCC-----------------CTCCCTC- i calJac3.chr22 C 0 I 19 s mm10.chr7 3716485 41 + 145441459 ATTCCTGTATCCATCCTAGCCATAAGCTCCCCAGCCCTCTC- i mm10.chr7 C 0 C 0 s canFam3.chr1 103000200 24 + 122678785 GGCCCCATCT-CAGCCT-----------------GTGCTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 46884325 46 + 50890351 I e rheMac3.chr19 60051317 43 + 64156825 I a score=267977.000000 s hg38.chr19_GL949753v2_alt 184060 95 + 796479 GACCCT-------GAGCCC-----A--------GGGT----------CCAGAG----CAGAGAACGGGATGGGGTCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACGGGGGA s panTro4.chr19 59116604 95 + 63644993 GACCCT-------GAGCCC-----G--------GGGT----------CCTGAG----CAGAGAACGGGATGGGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGGTGGGGGCGACAGGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994858 95 + 60714840 GACCCT-------GAGCTC-----A--------GGGT----------CCTGAG----CAAAGAACGGGACGGGGGCTGGGTA---GGGGCCCCTCACTTGGAACCAGGATGTTGGGTGGGGGCGACAGGGGG i ponAbe2.chr19 I 19 C 0 s nomLeu3.chr10 102763616 95 - 106955855 GGCCCT-------GAGCCC-----A--------GGGT----------CCTGAG----CAGAGAACGGGATGAGGGCTGGGTA---GGGGCCCCTCACTTGCAACCAGGATGTTGGATGGGGGCGACGGGGGG i nomLeu3.chr10 I 19 I 112 s rheMac3.chr19 60051360 92 + 64156825 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i rheMac3.chr19 I 43 C 0 s macFas5.chr19 55076875 92 + 59248254 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGACGGGG-- i macFas5.chr19 I 19 C 0 s papAnu2.chr19 47179035 92 + 51301725 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGTGGGACGGGGGCTAGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGATGATGGGG-- i papAnu2.chr19 I 19 C 0 s chlSab2.chr6 46884371 92 + 50890351 GACCCT-------GAGCCC-----A--------GGGT-----------CTGAG----CAGAGAGCGGGACGGGGGCTGGGCA---GGGGCCCCTCACCTGCAACCAGCATATTGGGTGGGGGTGTTGGGG-- i chlSab2.chr6 I 46 C 0 s calJac3.chr22 45467599 94 + 49145316 GACCCT-------GAACCC-----A--------GGGT----------CCTGAG----CAGATAACAAGATGGGGGCTAGGCA---GGGGCTTCTCATCTGCAACCAGGATGTTGGGTGGGGGCCGCAGGGG- i calJac3.chr22 I 19 C 0 s mm10.chr7 3716526 100 + 145441459 CCCCCT-------TATCCCCCATGA--------GAGC-----------CTGAG----CAGAGGCTAGGTCCCTGACTGAGTCTGTTGAGTTCCTCACCTGTGATCAGGATGTCCA--GGGGCTCACTGGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 103000224 119 + 122678785 GACCCTCTCCCCGGACCCC-----ATCACCCAGGGGTGACAGTGGCCCCTGAGCCTTCAGCAGACAGGACATGGGGCAG------GGGGCTCCTCACCTGTGATCAGGATGTCCAGAGGGGCACTGGGTG-- i canFam3.chr1 C 0 C 0 a score=224229.000000 s hg38.chr19_GL949753v2_alt 184155 64 + 796479 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT s panTro4.chr19 59116699 64 + 63644993 CCGACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGGCCCCCAGGGGGGTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55994953 64 + 60714840 CCAACCTTGGGCAGGAGGCATTGTGTCCACCGCAGCATCTGTGCTGTCCCCCATGGGGGTGGCT i ponAbe2.chr19 C 0 I 114 s nomLeu3.chr10 102763823 64 - 106955855 CCAACCTTGGGCAGGAGGCACTGTGTCCACCGCAGCATCTGTGCTGGCCCCCATGGGGGTGGCT i nomLeu3.chr10 I 112 C 0 s rheMac3.chr19 60051452 64 + 64156825 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55076967 64 + 59248254 TCAGCCTCCGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGTGGGTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179127 64 + 51301725 CCAACCTCGGGCAGGAGGCATCGTGTCCTCCGCAGCATCCGTGCTGGCCCCCATGGGGGTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884463 64 + 50890351 CCAACCTCTGGCAGGAGGCATCGTGTCCACCGCAGCATCCCTGCTGGTCCCCATGGGGGTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467693 59 + 49145316 CCTACCTTGGGCAGGA---AATGTGTCCGCCTCAGCATCTGTGCTGGCCCCC--GGGTGTGGCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3716626 64 + 145441459 CTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACT i mm10.chr7 C 0 C 0 s canFam3.chr1 103000343 64 + 122678785 CTGACCACGTGGAGGAGAGATTGTGTCCACTGTAGCACCTGTACCGGCCCCCGTGGGTGCGGCT i canFam3.chr1 C 0 C 0 a score=571175.000000 s hg38.chr19_GL949753v2_alt 184219 211 + 796479 CGCATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTCCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATGAGGCGACTGGTA--- s panTro4.chr19 59116763 211 + 63644993 CACATGGC-CCAGGGGGACGT------CCAGGAGGTGCTGCCCA-TCTAGGCGCTGGCGGGCTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCGGCCTCTGAGTGATGCT-GAGGGGTCAGGCTGTCTGCAGAGAGCACCGGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGACGAGGCGACTGGTA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995131 211 + 60714840 CACAGGGC-CCAGGGGGACGT------CCGAGAGGTGCTGCCCA-TCTAGGCGCTGGGGGGTTG---------GGAGCCCCTCGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGCCTCTGAGTGACGCT-GAGGGCCCAGGCCGTCTCCGGAAAGCACCAGTGATCCCGGCTGTGCTGAGAGGGGGGACTGAGGGCTGTCTGGAC-GCCCCTGAGATGAGGCAACTGGTA--- i ponAbe2.chr19 I 114 C 0 s nomLeu3.chr10 102763887 212 - 106955855 CACAGGGC-CCAGGGGGACTT------CCGGGAGGTGCCGCCCATTCTAGGTGCTGGGAGATTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACCAGCCTCTGAGTTACGCT-GAGGGCTTAGGCCGTCTCCAGAGAGCACCAGCGATCCTGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAT-GCCCCTGCGATGGGGCGGCTGGTA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051516 187 + 64156825 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077031 187 + 59248254 CACAGGGC-CCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAACCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179191 184 + 51301725 CACAGGGC-CCAGGAGGAAGT------CCG---GG-----------------------GGGTTG---------GGAGCCCCTTGTCC-TGGTCAATGCAGAGCTGTCAAAACTGGC--CTGAGTGACACT-GGGCGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCGGAGATAAGGCGACTGGTA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884527 188 + 50890351 CACAGGGCACCAGGAGGAAGT------CAGGGAGG-----------------------GGGTTG---------GGAGCCCCTTGTCC-CGGTCAATGCAGAGCTGTCAAAACCGGC--CTGAGTGACACT-GGGTGGTCAGGCCATCTCCAGAGAGCACCAGCGATCCCGGCTGTGCTGAGAGGGAGGGCTGAGGGCTGCCTGGAC-GCCCCTGAGATAAGGCGACTGGTA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467752 208 + 49145316 CACAGGGC-CCAGGAAGAAGT------CGGGTATGTGCTGCCCA-CATAGGCACTGGGGGGTTG---------GGAGCTCCTTGTCC-TGATCAATGCAGAGCTGTCAGATCTGGC--CTCAATGATGCTGGGGGGGTCAGGCTGTCTCCAGTGAGCTCCAGCGAGCCCAGCTGTGCT--GAGGGAGGGCTGTGGGCTGCCTGTGC-GCCCCTGAGAGGAGAGGATTGGTA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3716690 221 + 145441459 CACATAGC-CCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCT-TGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGAAACACT-GCAGGGTGAGGGTCATTCCAGGGTCCA-----GGATATGGCCTTGGTGAGTCAGCAGA--GAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTA--- i mm10.chr7 C 0 T 4822 s canFam3.chr1 103000407 208 + 122678785 CACAGGGT-CCAGGGGGAAGT------CGGGGCTGGGTTGACCA-TCCAGATGCTGGGCAGGTC---------TGAGCTCCTCATCCTTGGTCAGAGCGAATCTATCAAAGCCAGCTTCTGAGCGACACT-GCAGGGTCAGGTTTTCTCCAGAATGAACCAGTGAGCCCGGCTGGGCCATGAG-------TGAAGGCTCCCTGTAG-GCACCTGCATGGAAGGGCACAGTGACA i canFam3.chr1 C 0 C 0 a score=381315.000000 s hg38.chr19_GL949753v2_alt 184430 153 + 796479 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC s panTro4.chr19 59116974 153 + 63644993 TTTAGGGGATGCGTACTCTC-TGGGGCCCGCTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACTGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995342 140 + 60714840 TTTAGGGAATGCGCACTCT-----------CTGGGGCCTGCAGGGAGAGCTCG---CGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCTGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764099 141 - 106955855 TTTAGGGGATGCGCACT-------------CTGGGGCCTGCAGGGAGAGCTCTCACTGGTCTCAACTCCATGCCTTCTGCCTTGTGCTTCCGGCCCAAG-AGGTCGGGGTCACCGACCACCCCGTGTC-CACCTAAGGCTTCCCTGGACACACAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051703 141 + 64156825 TTTAGGGGATGCACACTCT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077218 141 + 59248254 TTTAGGGGATGCACACACT-----------CTGGGGCCTGCAGGGAGAGCGCCCA-CGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTCGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179375 142 + 51301725 TTTAGGGGATGCACTCTCT-----------CTGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAAGGTTGGGGTCACCGACCACCCCGTGTC-CGCCTAAGGCTTCCCTGG--ACACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884715 144 + 50890351 TTTAGGGGATGCACTCTCT-----------CCGGGGCCTGCAGGGAGAGCTCTCACCGGTCTCAACTCCATGCCTTCTGCCTTGGGCTTCTGGCCCATGAACGTCGGGGTTACTGACCACCCTGTGTC-TGCCTAAGGCTTCCCTGGACACACAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45467960 130 + 49145316 TTAAGGGGATATACTCTGT----------------------GGGGATAGTTCTCA-CAGTCTCAGCTCCATGTCTTCTGCC-TGTGGTTCTGGCCCAAG-AGGTCAGTGTCACCAACCACCCTGTGTC-CACCTGAGGCTTCCCTGGACACACAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 103000615 146 + 122678785 CTGAGGGGACCCAGACCCACATTGGGC---CCAAGGCCTACATGA--AGCTACCGTGGGTCCC--TCCCAAAGCCTCCAACCTGTAGTTCTGGCCCTAGGAGGCCAGTGTCAT---CCAGCCTGCATCACTCCCAGGGCTCTATTGGGCATATGGC i canFam3.chr1 C 0 I 1210 e mm10.chr7 3716911 4822 + 145441459 T a score=10476.000000 s hg38.chr19_GL949753v2_alt 184583 3 + 796479 AGG s panTro4.chr19 59117127 3 + 63644993 AGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995482 3 + 60714840 AGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764240 3 - 106955855 AGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051844 3 + 64156825 AGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077359 3 + 59248254 AGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179517 3 + 51301725 AGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884859 3 + 50890351 AGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468090 3 + 49145316 AGG i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103000761 1210 + 122678785 I a score=1216363.000000 s hg38.chr19_GL949753v2_alt 184586 442 + 796479 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-CCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- s panTro4.chr19 59117130 441 + 63644993 GAGATGGGCAATGAGGGT-GGGGTTGTGGCCCTGCCTGTCACGGTCCCCAGCAGTGCAGATGAATTAGACCATTGAG-TCACAGAGCCTGGAGGGCAGATGGGTGTGCT-GGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTTCCCCAGGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCACATTTGAGTCAAAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTCATCCA-GGGGTGACCCTTGTTCTAGCACATGAGGCTGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCC---------------AGAGGC---------------AAGCCCCTTCCATGTCCTGAG-CTCTGTAAT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995485 434 + 60714840 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTTACGGTCCCCAGCAGTGCAGGTGAATTAGACCACTGAG-CCACAGAGCCTGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCCGGGCTCTGTGTTACAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTCGCTCTGCTGCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGACCGTATTTGAGTC-AAATTTGACTTCCCCATAC-----TCTGCCTGCTTCCACCTCACCCAACTCTTATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCAC--TTCTAATTCT---------------AGAGGC---------------AGGTCCCTTCTGTGTCCTGAG-CTCTGTAAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764243 384 - 106955855 GAGATGGGCAATGAGGGTGGGGGTTGTGGCCCTGCCTGTCACCGTCCCCAGCAGTGCAGATGAATTAGACGACTGAG-CCACAGAGCCTGG-GGGCAGGT-GGCATGCTAGGCATAAGGAGCCCTGGGCTCTGTGTTGCAGGTCATGTGT-TCTCACCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCC-GGGCCTCGCTCTGCTCCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCTGGGGGCCTTTCAGA-------------------------------------------------CCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCA--------CGAGGCTAGAG----AGGGCAGGGCCTTAGGACACAGCC----CACTGTTCTCATTCT---------------AGAGGC---------------AAGCCCCTTCCGTGTCCTGAG-CTCTGTAAC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60051847 423 + 64156825 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCGTGGGGGTCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i rheMac3.chr19 C 0 I 292 s macFas5.chr19 55077362 423 + 59248254 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAA-CCACAGAGCATGGGGGGCAGATGGGCGTGCTGGGTATTAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCAGTGGCCTTGCAGGAAGGGAACAGCCCCTCCCCCAGGGCCTTGCCCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TAAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGGGAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179520 421 + 51301725 GAGATGGGCAATGAGGGTGGAGGTTGTGGCCCTGCCTGTCATGGTCCCCAGCAGTGCAGATG-ATTAGACCACTGAG-CCACAGAGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTC--TGTTACAGgtcatgtgt-tctcatcagtGGCCTTGCAGGAGGGGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACCTTTGACTC------------CCCCAagc-----tctgcctgcctccacctcaccCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAACTCC---------------AGAGGC---------------AGGTCCCTTG-GTGTCCTGAG-CTCTGTAAT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46884862 413 + 50890351 GAGATGGGCAATGAGGGTGGAGGTTGTGACCCTGCCTGTCATGGTCCCCAGCAGTGC---------AGACCACTGAG-CCAC--AGCATGGAGGGCAGATGGGCGTGCTGGGTATAAGGAGCCCTGGGCTCTGTGTTACAGGTCATGTGT-TCTCATCCGTGGCCTTGCAGGAGGAGAACAGCCCCTCCCCCAGGGCCTTGCTCGGCTCCCCCTGAAGGATGGGGCTGTGGGGACAGTAGGCTCTGGGGGCCTTTTAGACCACATTTGACTC------------CCCCAAGC-----TCTGCCTGCCTCCACCTCACCCAACTCAAATCCA-GGGGTGACCCTTGTTCTAGCACA------TGAGGCCAGAG----AGGGCAGGGCCTTAGGACACAGCCCAGTCACTGTTCTAATTCT---------------AGAGGC---------------AGGTCGCTTC-GTGTCCTGAG-CTCTGTAAT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468093 419 + 49145316 GAGATGGACAATGA-AGTGGGGCTTGTGGCCCTGCCTGTCATGATCCCCAGCAGTGCAGATGAATTAGACCATTGAGCCCACAGAGCCTGGAGGGCAGATGGGTGCACTGGGTGCAAGGAGTCCCGGACTC--------------TGTGT-TCTCACCAGTGGCCTCGAAGGAGGGGAAAAGCCCCTACCCCAGGGCCTCGCTCTGCTTCCCCTGAAGGATGGGGCTGAGGGGACAGCAGGCTCT-GGGGCCTTTCAGACCACATTTGGGTC-ACGTTTGACT-CCCCATGC-----TCTGCCTGCCTCCACCGTGCCCAACCCAAATCCA--GGGTGACCCTTGTTCTAGCACA------CGAGGTCAGAG----AGGTCAGGGCCTCAGGACACAGCCCAGTCACGGTTCTAATTCT---------------AGAGGC---------------AAGTGCCTTCTGTGTCCCGAG-CTCTGCAAC- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103001971 447 + 122678785 GAGAAGGACAGTGAGGTTCAGGGTGCTGGTGCTGCTTCCCATGGTCCCCAGAGGTGCAGACAGCTTATAAAGT-----CCTCAGAGCCTACAAGATGGACAGATACTCAGGGGGTGACAGGGCCCAGGCCCTGTGTTCCCCGTCACGGGTCTCTCATGAGCAGCCTCACAG-------------CCCTGCCTAGGGCCTTGCTTTGCTCTCCCTGAAGGGTGGCCCCACAG---CAGAAATCCCT-GGGACCTTGCAGACCAGATGTGAGTC-----------TCCCCAGACCCCATTCCCTCTACCTTTTCCTCACAGATCCCATGTCCAAAGAGTGGCCATCGTACCAGGTCT------CCAggctggggaggtagggcagggcct-gggagccagtccaatgtcagttccagttctgcccctgcctgtcacagaggctgtgtgacccgggctgagacacttccctttcctgagtttctgtAAAT i canFam3.chr1 I 1210 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=389133.000000 s hg38.chr19_GL949753v2_alt 185028 139 + 796479 GCA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccag-----gaggaggggagtcgtgggtgaagctgataggattcct-gctggactcacagagcctGGGTTAAT---GA s panTro4.chr19 59117571 139 + 63644993 GTA-------TCTTTTCTTTCATGAGCCTTGCGATCAGGCGATGTTTATTCAGTGGTTACCACATCCAGGCATGCTGCCAG-----GAGGAGGGGAGTCGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCCTGGGTTAAT---GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55995919 142 + 60714840 GCA-------TCTTTTCTTTCATGAGCCTCACGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccag-----gaggaggggagtcttgggtgaagctgataggattcct-gctggactcacagagctTGGGTTAATGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764627 142 - 106955855 GCA-------TCTTTTCTTTCGTGAGCCTCGCGATCAGGCGatgtttattcagtggttaccacatccaggcatgctgccgg-----gaggaggggagtcatgggtgaagctgataggattcct-gctggactcacggagcttGGGTTTATGAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052562 140 + 64156825 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i rheMac3.chr19 I 292 C 0 s macFas5.chr19 55077785 140 + 59248254 GCA-------TCTTTTCTTTAATCAACCTCGCGATCAGGCG--GTGTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47179941 140 + 51301725 GCA-------TCTTTTCTTTCATCAGCCTCGCGATCAGGCG--GTTTATCGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGAGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACGGAGCTTGGGTTACTGAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885275 140 + 50890351 GCA-------TCTTTTCTTTCATCAGCCTCGCAATCAGGCG--GTTTATGGAGTGGTTACCACATCCAGGCATGCCGCCAG-----GAGGAGGGGACTTGTGGGTGAAGCTGATAGGATTCCT-GCTGGACTCACAGAACTTGGGTTACTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468512 142 + 49145316 GCA-------TCTTTTCTCTCATCAGCCTCATGATCAGAAGAAGTTTATTGAGCAA--GCCACATCCAGGCTTGCTGCCGGAAGGAGGGGAGGGGAGGGGTGGGTGAGGCCGGTAGGATTCCT-GCTGGACTCATGGAGCTTGCGTTAATGA--- i calJac3.chr22 C 0 C 0 s canFam3.chr1 103002418 144 + 122678785 GCAAATTTTTTCCTTCCTTCTACGAGGCTGGCAATCAAGCA-TGTTTAGTGAGAAGTCATCATATCCAGTCATGGTCCCCA-----GCACTGGAGATTCATTGTTGAGG-TGACACACTCCTTCCCTGGACTCAT-GTGCTGTGATTAGTGA--- i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1583869.000000 s hg38.chr19_GL949753v2_alt 185167 718 + 796479 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTACACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCGTGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCggcccggcacggtggtttgcacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctc--tactaaagacacaaaaaatcagccaggtgtggtggtggacgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccgagattgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-------------------------------aaaaaaaaaaaa-----------aaaaCCGGGGAATCTTTAGAAAGCACAGTGGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCC s panTro4.chr19 59117710 723 + 63644993 ------CACATTACCCATGTTTA-GATAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGTGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAAAGTGAGCCAAAGGAAGCTGGGACCTCGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC----TGTTTAAGAAAATGGAAAATCCggctgggcacggtggttcacacctgtaatcccagcactttgggaggcggaggtgggtggattatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctg--tactaaagacacaaaaaatcagccaggtgtggtggtggaagccgagtag--ccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccatctcaaa-----------------------aaacaaacaaacaaaaaaaa-----------caaaaCGGGGAGTCTTTAGAAAGCACAGTAGAAACAGATGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTCACTAATGGTTAACCATAACCACACTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996061 719 + 60714840 ------CACATTACCCATGTTTA-GATTGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CTCATAGCAGGTGAGCAGCGTGCACCT---GTCATGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGACGTGAACAGTGAGGGTG-------GCACGC--AGAGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGGAAGCTGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAAGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCTggccgggcgcggtggttcacacctgtaatcccagcactttgggaggtggaggtgggtggattacgaggtcaggagttcgagaccagcctggccaacatggtgaaactccatctc--tactaaagacacaaaaaatcagccaggcgtggtggtggacgtgt-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccggaaggtggaggttgcagtgagccgagatcgcgccacagcactccagc-ctaggtgacagagtgagactccgtctcaa--------------------------------aaaaaaaaaaaa-----------aaaaagaGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCACTGTGCACAGAAGGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102764769 747 - 106955855 ------CACATTACCCATGTTTA-GATAAGAGGTAATTCTGCGCCGGTTTCA----------ACAAGTTGTAGGAAA-----------AAAAACATG----CTCAT---AGGTGAGCAGCGTGCACCT---GTCACGGGAGTGAGGGGTCCTTCTGGGGGATGGAGAGAC-CAAGATGTGAACAGCGAGTGTG-------GCGCGCGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGATGGGACCTTGTCATTCAGGGGACTTGTGCACCATGAGGATTTATTGGATGC--TATGTTTAAGAAAATGGAAAATCCAgccgggcgcggtggttcacacctgtaatcccagcactatgggaggtggaggcgggtggattacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccccgtctctatactaaagacacaaaaaattagccaggcgtggtgatggatgcct-gtaatcccagctactcgggaggctgaggcaggagaatcacttgaaaccaggaggtggaggttgcagtgagccaagatcgcgccacagcactccagcactaggtgacagagtgagactccgtctcacaaaaaaaaacaaaaaaaaaaaacaaaacaaacaaacaaaaaaaa-----------aaaaaCAGGGAATCTTTAGAAAGCACAGTAGAAACAGGTGTCTGTTTTTACAAGCCCATCAC--TGCACAGAATGCAATATGGGAGGGTTTTACTAATGGTTAACCATAACCACACGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60052702 716 + 64156825 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccacagcgctctagc-ctgggcgacagagtgag-ctccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55077925 717 + 59248254 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATACGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtaatcctagcactttgggaggtggaggtgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaaaaattaaccaggcgtggtggtggacacct-ggaatcccagctgctttggaggctaaggcaagagaatcactggaacccaggaggcggagtttgcagtgagccgagattgtgccatagcgctctagc-ctgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaagaaaa----------------TGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACGGATAACCATAACCACACTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180081 725 + 51301725 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCGGTTTCG----------ACAAGTTGtaggaaagg-------aggaaaacatg----CCCATAGCAGGTGAGCAGCGTGCACCT--GGTCACGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGTGTGGAGGGCGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGACCTGAGAGTGAGCCAAAGAAAGCTGGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATATTATACGTTTAAGAAAATGGGagatctggctgggcgcagtggttcacacctgtaatcctagcactttgggaggcggaggcgggcagattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccctgtctc--tactaaagatataaacaattaaccaggcatggtggtggacacct-ggaatcccagctgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagattgtgccacagcactctagc-ctgggcgacagagtgagactccctctcaaa-------------------------------aaaaaaaaaaaa--------aggaaaatgggggAATCTTTAGAAAGCACAGTAGAAACAGACGTCTCTTTATACAAGCCCAACAC--TGCACAGAATGCAATAT-GGAGGGTTTTACTGACAGTTAACCATAACCACACTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46885415 733 + 50890351 ------CACATTACCCATGGTTA-GACAGGAGGTAATTCTGCTCCAGTTTCA----------ACAAGTTGTAGGAAAGG-------AGGAAAACATG----CCCATAGCGGGTGAGCAGCGTGCACCT--GGTCATGGGAGTGAGGGGTCCTTCTAGGGGATGGAGAGAC-CAAGACGTGAACAGCGAGTGTG-------GTGCGTGGAGGGTGTCCTCCACCAGAAACAGTGTGGGCTGTTCTCAGATCTGAGAGTGAGCCAAAGAAAGCTAGGACCTTGTCATTCAGGGGTCTTGTGCACCATGAAGATTTATTGGATGTTATATGTTTAAGAAAATGGGAGATCTggctgggcgcggtggttcacacctgtagtcctagcactttgggaggcggaggcgggcggattacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccctctc--tactaaagatacaaaaaattaaccaggcgtggtggtaggcgcct-ggaatcccagttgctttggaggctgaggcaggagaatcactggaacccgggaggcggagtttgcagtgagctgagatggtgccacagcgctctagc-ccgggcgacagagtgagactccgtctcaaa-------------------------------aaaaaaaaaaaagaaagaaaaaagaaaATGGGGAATCTTTAGAAAGCACAGTAGAAACAGACGTCTGTTTATACAAGCCCAACAC--TGCACAGAATGTAATAT-GGAGGGTTTTACTGACGGTTAACCATAACCACACTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103002562 424 + 122678785 CCAACAGACAATACAAATATTTAGGGGAGAAAACAATTCTACTATGGTCTAATAAGAGTCTTCCAAGTTGGAAGAAAAAAGAAAACAGGGAACCATGAGATTCGGTAACATGTAGATGTCATACAACCTGGGTCCTGGTCATGAGAGGTCCTTCTAGGGGATGGAATGATGGAAGGCACAAGCCAGGGGTATGCAGAGACGAGAGTGGGGGACATCCTCAACCAGAAAGATCTTGAGCTGTTCTCAGAACCGAGAGTGATC---AGGAGGCCAggaccttgtcacgca-ggattttgagccccaag------------------------taagca-------------------------------------------------tttggga------------------------------------------------------------------tttc--tact---------------------------------------t------------------------taaggcaatgggaagattttaacc----------------------------------------------agc-------------------------------------------------------------------------a------------------gagagtc-----------------aaacaaatttctgtctggaaaagactaACAC--TGTAAGAAAT------------------ACTGACAATTA---GTAGTAAAATTCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468654 0 + 49145316 C a score=113253.000000 s hg38.chr19_GL949753v2_alt 185885 42 + 796479 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT s panTro4.chr19 59118433 42 + 63644993 AGCGTGAGCCCAGCCACTAGGCAATGTGCTGATAAGGATTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996780 42 + 60714840 AGCGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765516 42 - 106955855 AGTGTGAGCCCAGCCGCTAGGCGATGTGCTGATAAGGATTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053418 42 + 64156825 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078642 42 + 59248254 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180806 42 + 51301725 ATTGTGAGCCCCACCGCTAGGTGATGTGCTAATAAGGATTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886148 42 + 50890351 ATTGTGAGCCCCACCGCTAGGTGACGTGCTAATAAGGAGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45468654 42 + 49145316 AGTGTGAACCCAGTTGCTAGGTGATATGCTGATCAGGAttct i calJac3.chr22 C 0 I 1844 s canFam3.chr1 103002986 34 + 122678785 AGCATTCATGTGGTCTCTGGGT--TGTGCTGATCAG------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T a score=1145860.000000 s hg38.chr19_GL949753v2_alt 185927 501 + 796479 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTCTCTTTGTCATAGTCTAC----------CAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAAGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGGGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT s panTro4.chr19 59118475 495 + 63644993 AAGTGGTTTATGTGGACTCCTCATG-ACCTATGACAC-ACATACGTTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------GAGCTCTGCAGAGGTG-TCAGCTACATCCGGATTGGCTCAGGGAGCGG-CCGTCAGAAGACTT-ACATGTGTTTAATAACTGAGGTTGTGTGTATGTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCA------CAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGCATCTTATTTTTGGAAGATGGAGCCCCGTTGGAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATGGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGGT-GCAGTG-CACAGACAGGG-CGTCCTCGGTCCCCAGCTGAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55996822 498 + 60714840 GAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATAGTCTAC----------AAGCTCTGCAGAGGTG-TCGGCTACATCCAGATTGGCTCAGGGAGCGG-CTGTCAGAAGACTTAACACTTGTTTAATAACTGAGGTGGTGTGTGTCTGGCAGGGAG--CGGGTAAC--TGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAA--GTATCAGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTTTGGAAGATGGAGCCCCATTGAAGGAATTTGAGCCGT-----GGAGGGTCACAGCCAGGTCAGATTGTCAGAAGAGGCCTT------GGAAGTGATGAGAGGGATGGGCTGGAGTAGGGATGGGAGCCAG--TA-GGGGCCAGGAGGGAGGCTGAT-GTAGTG-CACTGACAGGGCCGTCTTCGGTCTCCAGCTGAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102765558 500 - 106955855 AAGTGGTTTACGTGGACTCCTCATG-ACCTGTGACAC-ACATACATTTACAGTGGAGTGGAACGAGGCAGGAGGGCTTGTCTTTGTCATCGTCTAC----------GAGCTCTGCAGACGCG-TCGGCTACATCCAGATCGGCTCAGGGAGCAG-CCATCAGAAGACTT-ACACGTGTTTAATAACTGAGGTTGTGTGTGTCTGGCAGGGGG--TGGGTAACTGTGA---TGAGTTTGGTGTGGCAGAGGGGGAGCCATAGCCTGTGAAGCTGGAAAGTGTATCAGGTTTGGTCATCAACAGGCTTGAACGTGAGGCACA-GAACGTGAATCTTATTTTTGGAAGATGGAGCCCCGTTGAAGGAATTTGAGCAGT-----GGAGGGTCACAGCCAGGTAAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGACTGGAGTAGGGATGGGAGCCAG--TAGGGGGCCAGGAGGGAGGTTGAT-GCAGTG-CACAGACGGGG-CGTCCTCCATCTCCAGCTGAGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053460 492 + 64156825 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCCTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCCTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55078684 492 + 59248254 CAGTGGTTTGTGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAGTGGAATGAGGCAGGAGGGCTTGTCTTTATCATTGTCTAC----------GAGCTCTGCAGAGGCGCCCGGCTACATCCAGATTGGCTCAGGAAGCAG-CCATCAGAAGACTT-ACCAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGAGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCCGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGAGGCCAGGAGGGA-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTTGGTCTCCAGCTGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47180848 502 + 51301725 AAGTGGTTTGCGTGGACTCCTCATG-ACCTGTGACAC-AAATATGTTTGCAGTTGAATGGAACGAGGCAGGAGGGCTTGTCTTTATCATCGTCTACGAGCTCTGCAGAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGAAGCAG-TCATCAGAAGACTC-ACAAGTGTTCAATAAcggagggtgtgtgtgtctggcAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGCCGGG---------AG--TAGGGGGCCAGGAGGGA-GCTGACGGCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGTTGAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886190 491 + 50890351 GAGTGGTTTGCGTGGTGTCCTCATG-ACCTGTGACAC-AAACATGTTTGCAGTTGAGTGGAACGAGGCTGGAGGGCTTGTCTTTATCATAGTCTAC----------GAGCTCTGCAGAGGCG-TCGGCTACATCCAGATTGGCTCAGGGAGCAG-TCATCAGAAGACTT-ACAAGTGTTCAATAACGGAGGGTGTGTGTGTCTGGCAGGGGG--TGGGTGACTGTGA---TGAGTTTGCTGTGGCAGAGCGGGAGCCATAGCCTGTGAAGCTGGAAAGCGTATCGGGTTTGGTCATCAACAGGCTTGAACATGAGGTACAGGAACGTGGATCTTATTTCTGGAAGATGGAGCCCCGTCGAAGGAATTTGAGCAGT-----GGAGGGTCAGAGCCAGGTGAGATTGTCAGAAGAGGCCTC------GGAAGTGATGAGAGGGATGGATGGGAGGCGGG---------AG--TAGGGGACCACGAGGGG-GCTGAC-GCAGTG-CACAGACAGGG-CGTCCTCGGTCTCCAGCTGAGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003020 463 + 122678785 --------TATTTAAGCCTCACATGAACCTATCATACAAAACACATGTACAGTTGAGCAGAACGAGCCAGGATGGCTTCTCC--------ATCTGG----------CAGGT-TGGGGAGGAG-TTGGCCAGGTTCAGATTGGCTAAGGAGACAGCCCGAGAAAAGGCGT-GGAATTGTTGAGTAGCTCAGTGTGTGT-TGCTTGGGAAGGTATTTGGGTGAGAGGGGAGTTGTGTTTGCTGGGGC-------------TAGTGGGTTTAGC-----------TCTGGCCTGATGGTC-ACAGCCTTAAAGATGAGATAGTGCAACTTATATC---TTTCTGAAGGAGAG-----TGTGGGAGGGTTTTGAGCATCCCACAGGATGAGCCCAGCCTGGTGA-----TTAGTAGGGTCTTCTAATCTAGAGGTGGTGAGAGGAATGCAATGGGGAGAGG---GGGGCCTGCTTGGAGGAGCAGTGGGGAGGCTGAT-CTGCTGACGCACACAGA--CTTCTTGAGTCTTGCGATGGGTT i canFam3.chr1 C 0 I 48 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=267639.000000 s hg38.chr19_GL949753v2_alt 186428 115 + 796479 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC s panTro4.chr19 59118970 115 + 63644993 TAGACTGTAGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGTGGGCAGAGAGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997320 112 + 60714840 TAGACTGTGGGGATGGACCAGCGGGACACGGGTGGAGCCGGGTGACGAGGGATGGGGAC----CGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766058 114 - 106955855 TAGACTGTGGGGATGGACCAGC-GGACACGGGTGGAGCCGGGTGAGGAGGGATGGGGGCAGCGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAA-AGTGTGA-------GGAGTTTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60053952 115 + 64156825 TGGACTGTGGGGATGGACCAGG-GCACATGGGTGGAGCCAGGTGAGGAGCAATGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGTGTGA-------GGAGCTTTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079176 110 + 59248254 TGGACTGTGGGGATGGACCAGG-GGACATGGGTGGAGCCAGGTGAG-----ATGGGAGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181350 115 + 51301725 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCAACGGGGGCAGAGTGGTTTGAATTTGTTCAGTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886681 115 + 50890351 TGGACTGTGGGGATGGACCAGG-GGACACGGGTGGAGCCAGGTGAGGAGCGACGGGGGCAGAGCGGTTTGGATTTGTTCACTGTGTGTGAAGCAGAAGAGCGTGA-------GGAGCTTTTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19724006 107 - 122678785 -TGACTGTGGTGATGG-------TCGCATTAATGGA-----ATGAG--GGCTCCCGGGCAGAACTGTGTGGAGTCG-TCATCGTGTGTCATGTAGAAGGGTGTGAAGCACGGAGAGCTCTCTC i canFam3.chr1 I 64854 T 23254 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=433570.000000 s hg38.chr19_GL949753v2_alt 186543 182 + 796479 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTCGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt s panTro4.chr19 59119085 182 + 63644993 ACTCTCTGCCTTGGTTGATGGGAGGAACCAGTGGGGCTGCCGCAGGACAGACGACCCGCGTGGGAGAAGGAGGCTTGGGGAGATGTTTCTAAGAC--TTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------CTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997432 184 + 60714840 ACTCTCTGCCTTGGTCGATGGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGACCTGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTTAACTTGCTCACAGAGGGAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAGACAGATCCCTTCACTGACtttc-tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766172 184 - 106955855 ACTCTCTGCCTTGGTTGATGGGAGGAGCCAGTGGGGCCGCCGCAGGACAGATGACCCGCGTGGGAGAAGGAGGCTGGGGGAGATGTTTCTAAGACTGTCAACTTGCTCACAGAGGGAAGCACGA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTTCCCAAACAGGTCCCTTCACTGACtttc-tttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054067 182 + 64156825 ACTCTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGACGGCCCGCATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTCCCCAAACAGGTGCCTTCCCTGACtttcttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55079286 181 + 59248254 ACTCTCTGCGTTGGTTGATAGGAGGAGCCAGTGGGGCCGCCACAGGACAGACGGCCCACATGGGAGAAGGAGGCCTGGGGAGGTATTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTCAAGCCTGGG---------TTTTGTTTTCCCAAACAGGTGCCTTCCCTGACTGAC-tttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47181465 178 + 51301725 ACTCTCTGCTTTGGTTGATAGAAAGAGCCAGTGGGGCCGCCACAGGACAGACGACCCGCATGGGAGGAGGCGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGTTCACAGAGGGAAGCACAA-GCTTCCTTTGAGCCTGGG---------TTTTGTTTCCCCGAACAGGTGCCttccctgact----tttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46886796 179 + 50890351 ACTGTCTGCGTTGGTTGATAGGAGGAGCCGGTGGGGCCGCCACAGGACAGGCGACCCGCGTAGGGGGAGGAGGCCTGGGGAGGTGTTTCTAAGACCGTT---TCGCTCACAGA--GAAGCACAA-GCTTCCTTCGAGCCTGGG---------TTTTGTTTCCCTGAACAGGTGCCTTCCCTGACtttc-tttttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 103003531 188 + 122678785 ACTCTCTGTCT--GGTGCCTGGAGGAGCCAGTGGGGCCATCCCAGGA-GGATGATCCA---GGAAAAGGCAGGGACTGGGAGGTGATTTGAAGACAGATCATCATTTCTCAGAAGGAAGCATGACCCTTCCTCCTACCCTGGGATTGTGGATTTTCTTTGTACCCCACACTTCCCTTCACTGACTTCC-TTATTT i canFam3.chr1 I 48 T 4672 e mm10.chr7 3716911 4822 + 145441459 T e calJac3.chr22 45468696 1844 + 49145316 I a score=89658.000000 s hg38.chr19_GL949753v2_alt 186725 37 + 796479 ------gagacggagtctcgctctgtcgcccaggctggagtgc s panTro4.chr19 59119267 37 + 63644993 ------gagacggagtctcgctccgtcgcccaggctggagtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997616 37 + 60714840 ------gagacggagtctcaatctgtcgcccaggctggagtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766356 37 - 106955855 ------gagacggagtctcgctctgttgcccaggctggagtgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60054249 43 + 64156825 tttttagagacggattctcgctctgtcgcccaggctggagtgc i rheMac3.chr19 C 0 M 651 s macFas5.chr19 55079467 43 + 59248254 tttttagagacggattctcgctctgtcgcccaggctggagtgc i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47181643 43 + 51301725 ttttttgagacggagtctcgctctgtcacccaggctggagtgc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46886975 43 + 50890351 ttttaagagacggagtctcgctctgtcccccaggctggagtgc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I a score=910.000000 s hg38.chr19_GL949753v2_alt 186762 1 + 796479 a s panTro4.chr19 59119304 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997653 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766393 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 46887018 1 + 50890351 a i chlSab2.chr6 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e papAnu2.chr19 47181686 1 + 51301725 I e macFas5.chr19 55079510 1 + 59248254 I e rheMac3.chr19 60054292 651 + 64156825 M a score=646446.000000 s hg38.chr19_GL949753v2_alt 186763 588 + 796479 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagagacggggtttcaccgtgctagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccatcgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcccccttttttttttttttt-----agacatggtcttgctctgtttcccaggctggagtgcagtggcgtgaccccagctcactacaacctccacctcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgcaaccacgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctattctcgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgctcggc s panTro4.chr19 59119305 580 + 63644993 gtggcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaatcttttgtatttttagtagaggcggggtttcaccgtgttagccaggatggtctcaatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccAACTTTCCTGTTAATGAGTAGCA--CTCTTTTtttctttcttttctttcc-----tttttttttcttt-----agacacggtcttgctctgtttcccaggctggagtgcagtggcgtga---cagctcactacaacctccacttcctgggttcaggtgattgtcctgcttcagcctcccaagtagct-ggattacaggcacgtgccaccatgcctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctggtcttgaactcctgaccttaaatcatcctcttgccttggccccccaaagtgttaggattacaggcatgagccatcatgcttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55997654 573 + 60714840 gtggcgcgatctcggctcactgcaagctccgcttccggggttcacgccattctcctgcctcagcctccggagtagctgggactacaggcacccgccaccacgcccggctaattttttgtatttttagtagagacagagtttcactgtgttagccaggaaggtctcaatctcctgacctcatgacctgcccgcctcggccttccaaagtgctgggattacaggcatgagccactgcgcccagccAGCTTTCCTGTTAATGAGTAGCACTCTCtttttttctttctcttctttcctttcttttttttttttttttaaaagacatggtcttgctctgtttcccaggctggagtgcagtggcgtgatctcagctcactacaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctcactaatttttgtatttttagtagagacggagtttcaccatgttggccagcctgttcttaaac----------------------tgccttggcctcccaaagtgttaggattacaggcatgagccaccatgcttggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102766394 518 - 106955855 gtggcgcgatctcggctcactgcaagctccacctcccaggttcac-ccagtctcctgcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcccggctaatgttttgtttcttcagtagagacagagtttcactgtgttagccaggatggtctcaatctcctgacctcgtgacccgcccgtctcggcctcctaaagtggt-ggattacaggcgtgaggcaccgcacccggccAACtttcct----------------------------------------------attttttttttta-----agacgcggtcttg--ctgtttcccagggtggatggcagtggcatgatctcagctcactaccacctccacctcctcggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggcacgtgccaccacgcctggctaatttttgtatttttagtagagatggagtttcaccatgttggccaggctgttctcaaac----------------------tgcgttggcctcccaaagtgttaggagtacaggcatgagccaccatgcttggc i nomLeu3.chr10 C 0 M 1151 s macFas5.chr19 55079511 568 + 59248254 gtggcgcgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccatgcccggctaa-tttttgtatttttactagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgattcgcctgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccAACTTTCCTGTTA--GAGTAGCA--Ctctctctt------ttttctt--------ttcttttttttca-----agacacggtcttgctctgtttcccatgctggagtgcagtggcatgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagct-ggattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagac--agtttcaccatgttggccaggctgttctcgaactcctgacttcaattaatcctcttgccttggcctcccaaagtgttaggattacaggcgtgagccaccatgcttggc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47181687 578 + 51301725 gtggcacgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggaccacaggcgcccgccaccacgcccggctaattttttgtatttttactagagacggggtttcaccgtgttatgcaggacggtctcgatctcctgacctcgtgattcgcccgcctcagcctcccaaagtgctggggttacaggcgtgagccaccgcgcccggccaactttccTGTTA--GAGTAgca--ctctctcttt-tttcttttctt--------ttcttttttttca-----agacacaatcttgctctgtttcccatgctggagtgcagtggcgtgatctcagctcactggaacctccacctcctgggttcaggtgattgtcctgcctcagcctcccaagtagctaagattacaggtgtgtgccaccacacctggctaatttttgtatttttagtagagacagagtttcaccatgttggccaggctgttctcaaactcctgacttcaattaatcctcttgccttggcctcccatagtgttaggattacaggcgtgagccaccatgtttggc i papAnu2.chr19 I 1 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=163217.000000 s hg38.chr19_GL949753v2_alt 187351 213 + 796479 cTCTTTTttctttttctttttttttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggtgccagcgattctcctgcctcaatctcccagttagctgggattacagatgcgcgccaccatatccagctaaattttgtattttttagtaaagacagag s panTro4.chr19 59119885 211 + 63644993 cTCTTttttctttttc--tttctttttttttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcagcctccacctcccaggttccagcgattctcctgcctcaatctcccagttagctgggattacagacgtgcgccaccatatccagttaaattttgtattttttagtaaagacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998227 201 + 60714840 ctcttttttctttttc------------tttgtttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcagctcactgcagcctccacttcccaggttccagcgatgctcctgcctcaatctcccggttagctgggattacagatgcgcgccaccatgtctggctaaattttgaattttttagtagagatggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55080079 197 + 59248254 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggctggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgcgccaccatgtccggctaatttttgtattttttagtagagatggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182265 197 + 51301725 ctcttttttctttttc----------------tttttgagatagagtcttgctctgtcacccaggttggagtgcagtggtgccatctcagctcactgcagcctccacctcccaggttccagcaattctcctgcctcagcctccctggtagctgggattacagatgcgtgccaccatgtccggctaatttttgtattttttagtagagatggag i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60054292 651 + 64156825 M a score=687469.000000 s hg38.chr19_GL949753v2_alt 187564 541 + 796479 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcttcagcctcccaaagtgttgggattacgggcatgagccaccatgctcggcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacgtgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctcattgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt s panTro4.chr19 59120096 540 + 63644993 ttttaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaggtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcacctccacagccactacttatttttgtaGCGatgtctatcagctggtgaatagag----aaagtgtggtatatccttacaacaaaatattattcaaccgtagaaaggaatgaagtactcatacatgctacatgtgtgaaccttgataatatactagataaaagcagtcaggaaaaaaaggtcacatatgacgttatttcatttataagaagtatccagcctgggtgtggtggctca-tgcctgtaatccagcactttgggaggccaaggcaggtggattgcctgagtttaggagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 55998428 544 + 60714840 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagcgttgggattacgggcatgagccaccatgctcagcctcttttttctttgcttaaaagatgaggcctgttgcccaggctggagtgcagtggcactatcatagctcactgcagccttgacatcgtggctcaagtgatcctcctgcctcaggctcccgag------------tggctgggactacaaacatgcacctccacagccactacttatttttgtaGCaatgtctatcagttggtgaatagagaaacaaagtgtggtatatccttacaataaaatattattcaaccgtaaaaaggaatgaagtactcatacatgctacatgtgtgaaccttggtaatatactagataaaagcagtcaggaaaaaaaggtcacatacgacattatttcatatataagaagtatccaggctgggtgtggtggctca-cgcctgtaatccagcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i ponAbe2.chr19 C 0 I 1191 s rheMac3.chr19 60054944 556 + 64156825 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaaagcgttgggattatgggcatgagtcaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgagtggctgggactatggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccatacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaagggtcacatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtgggttgcctgagtttaggagtt i rheMac3.chr19 M 651 C 0 s macFas5.chr19 55080276 544 + 59248254 tttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcggcctcccaaagcgttgggattatgggcatgagccaccacacctggcctcttttttctttgctgaaaagaaaaggtttgttgcccaggctggagtgcagtggctctatcctagctcactgcagccttgacatcctgactcaagtgatcctcccgcctcaggctcccgag------------tggctgggactacagacatgcaccaccatagccacgacttatttttgtaGCaatgtctatcagctgatgagtagagaaacaacgtgtggtatatccttacaacaaaatcttattcaaccacacaaaggaatgacacactcacacatgctacacaggtgaaccttgataatatattagatgaaagcagtcaggaaaaaaaggtcgcatatgacgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47182462 544 + 51301725 tttcaccatgttggccaggctggtcttgaactcctgacttcagatgatccgcccgcctcagcctcccaaagcgttgggattacaggcgtgagccaccacacctggcctcttttttctttgcttaaaagATAAggtctgctgcccaggctggagtgcagtggcactatcctagctcactgcagccttgacatcctggctcaagtgatcctcccgcctcaggctcccgag------------tggctggggctacagacatgcactaccatAGCCACTACTTATTTTTGTAGCAATGTCTATCAGCTGATGAGTAGAGAAACAACGTGTGGTATATCCTTACAACAAAATCTTATTCAACCATACAAAGGAATGACATACTCACACATGCTACACAGGTGAACCTTGATAATATATTAGATGAAAGCAGTCAGGAAAAAAGGGTCACATATGACgttatttcatttataagaaatatccaggctgggtgtggtggctca-cgcctgtaatcttgcactttgggaggccgaggcaggtggattgcctgagcttaggagtt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=508204.000000 s hg38.chr19_GL949753v2_alt 188105 587 + 796479 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcatggtggcatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctc------aaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttgatgtaaactcggtttccttctcggtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctataatcccagcactttgggaggcaggcagatcaagaggtcaggagttcaagaccagcctggc---------aaaaccctgtctctactaaaaatataaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc s panTro4.chr19 59120636 602 + 63644993 tgagaccagcctgggcaacatggtgaaataccatctctaccaaaaatacaaaaaattcacccggcgtggtggtatgtgcctgtgatcccagctacttgggaggctcaggtggcaggatcgcttgagcctgggaggcagaggttacagtgagccgagatcacaccactgcactccaacctgggtgacagagtgagtccctgtctcaaaaaaaaaaaaaaaaaaaaaaggtattcaaagaaggccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgcttaatgtaaactcggtttccttctcagtatgataaaaatgtttcggaatgagatagaggtgatgcttacaccatattgtgaatttactaaatgccacaaaatAGAGTTGTATCTCAATAAAAATATATTTGTTGggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggcaggcggatgaagaggtcaggagttcaagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaacttagccaggcgtggtggcatgtgtctgtaatcccagctactc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60055500 591 + 64156825 agagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccatctacttgggatgctcaggaggcatgatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgaggccctgtctc---------aaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggcatgtgcctgtaatcccagctactc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55080820 592 + 59248254 cgagaccagcctgggcaacatggtgaaataccacctctacc--aaacacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctcaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgggtgacagagtgagaccctgtctc--------aaaaaaaaaaaaaaggtattcaaagaaagccaatcgatagaggcagaaagtaggttaattgttgcatgggattaggtgggagtgattgctgaatgtaaactgggtttccttctcagtatgataaaaatgttttggaatgagatagaggtgatgcttacaacatattgtgaatttactaaatgccaccaaatagtGTTGTATCTCAATAAAAATATATTTGTTGggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaatcagccaggtgtggtggcatgtgcctgtaatcccagctactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183006 595 + 51301725 cgagaccagcctgggcaacatggtgaaataccaccTCTACC--AAAcacaaaaaattcgccaggcatggtggcatgtgcctgtggtcccagctacttgggaggctgaggaggcaggatcacttgagcctgggaggcagaggttacagtgagcagagatcacgccactgtactccaacctgagtgacagagtgagaccctgtctc-----aaaaaaaaaaaaaaaaaggtattcaaaGAAAGCCAATcgatagaggcagaaagtaggtTAATTGTTGCATGGGATTAGGTGGGAGTGATTGCTGAATGTAAACTGGGTTTCCTTCTCagtatgataaaaatgttttggaatgaGATAGAGGTGATGCTTACAACATACTGTGAATTTACTAAATGCCACCAAATAGtgttttatctcaataaaaatatatttgttgggtcgggtgcggtggctcatgcctataatcccagtgctttgggaggcgggcggatcacaaggtcaggagttcgagaccagcctggccagcatggtgaaaccctgtctctactaaaaatacaaaaattagccaactgtggtggcgtgtgcctgtaatcccagctactc i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=8864.000000 s hg38.chr19_GL949753v2_alt 188692 17 + 796479 gggaggctgaggtagaA s panTro4.chr19 59121238 17 + 63644993 gggaggctgaggtagaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081412 17 + 59248254 gggaggctgaggcagga i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47183601 17 + 51301725 gggaggctgaggcagga i papAnu2.chr19 C 0 I 10 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=7441.000000 s hg38.chr19_GL949753v2_alt 188709 87 + 796479 TGGAGCGAGACTCCGTCTCAAAAAAAAatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc s panTro4.chr19 59121255 85 + 63644993 cggagcgagactccgtctc--aaaaaaatatatatatatgtaaatatatatatgttgggcatagtggtgcacacatgtagtcccagc i panTro4.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47183618 10 + 51301725 I e macFas5.chr19 55081429 10 + 59248254 I e rheMac3.chr19 60056091 0 + 64156825 C a score=1083.000000 s hg38.chr19_GL949753v2_alt 188796 5 + 796479 tactt s panTro4.chr19 59121340 5 + 63644993 tgctt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55081439 5 + 59248254 aacct i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47183628 5 + 51301725 aacct i papAnu2.chr19 I 10 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056091 0 + 64156825 C a score=77281.000000 s hg38.chr19_GL949753v2_alt 188801 122 + 796479 gggaggctgaggcaggagaaccacttgaacctgggaagcggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcgaaaaaaaaaaaaa------------- s panTro4.chr19 59121345 121 + 63644993 gggaggctgaggcaggagaaccacttgaacctgggaagtggaggttgcagtgagccgagactgcaccattgcactcctgcctgggcaaaaagagtgaaactccatctcg-aaaaaaaaaaaa------------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056091 135 + 64156825 gggaggctgaggcaggagcaccacttgaacctgggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaaaagaaaagaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081444 103 + 59248254 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaagaaaaaaaaaaagaaaagaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183633 102 + 51301725 --------------------------------gggaggtggagactgcagtgagccgagattgcaccattgcactcctgcctgggcaacaagagtgaaactccatctcaag-aaaaaaaaaagaaaagaaaaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102766912 1151 - 106955855 M e chlSab2.chr6 46887019 10 + 50890351 I a score=348529.000000 s hg38.chr19_GL949753v2_alt 188923 323 + 796479 CCACACACACACAC--GTAGATAAAATCAAAT---ATTCTGTATTCCATAAATATGTACAATTATTATTTTTCAATTAAAAACTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagatcccattgctacaaaaaaatttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa s panTro4.chr19 59121466 323 + 63644993 CCACACACACACAC--GTAGATAAAATCaaat---attctgtatgccataaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcggagatgggaggctcttgagcccacaagtttgaggccagtttgggcaacatcgtgagaccccattgctacaaaaaaatttaaaaTATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttccttctgtgttttcagttacctggtggtcaaccatggtccaaaaatattaaatagaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102768084 326 - 106955855 CCACACACACACACTAGTAGATAAAATCaaataccattctgtatgccataaatatgtacaattattatttgtcaattaaaaa--CTTAAgctgggcacaatggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggcagagatgggaggctcttgagtccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaaaaaaTTTAAAATATATTTTTAAAAAACCCTAATAcagtagtccccctttatctgtaattttctttctgtgttttcggttacctggtggtcaaccatggtccaaaaacattaaatagaaaa i nomLeu3.chr10 M 1151 C 0 s rheMac3.chr19 60056226 312 + 64156825 CCACACATACACTA--GTAGATAAAGTCAAAT---ATTCtgtaccctataaatatgtacaattattatttgtcaattaaaaaCTCT------------------------------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------------NNNNNNNTgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081547 323 + 59248254 CCACACATACACTA--GTAGATAAAATCAAAT---ATTctgtaccctgtaaatatgtacaattattatttgtcaattaaaaaCTCTTAAgctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccaggagtttgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatATATTTTTAAAAAACTCTAATAcagtagtccccctttatctgtaattttctttctatgttttcagtaacctggtggccaaccatggtccaaaaatattaaatagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47183735 323 + 51301725 ccacacatacACTA--GTAGATAAAATCAAAT---ATtctgtaccctataaatatgtacaattattatttgtcaattaaaaactcttaagctgggcacagtggctcatgcctgtaat------------------------------------------------------------cccaacactttgggaggtggagatgggaggctcttgaacccagaagttcgaggccagtttgggcaacatagtgagaccccatctctacaaacaattttaaaatatatttttaaaaaactctaatacagtagtccccctttatctgtaattttctttctatgttttcaGTAACCTGGTGGCCAACCAtgatccaaaaatattaaatagaaaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e chlSab2.chr6 46887019 10 + 50890351 I a score=3437.000000 s hg38.chr19_GL949753v2_alt 189246 5 + 796479 gttaa s panTro4.chr19 59121789 5 + 63644993 gttaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60056538 5 + 64156825 gttca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55081870 5 + 59248254 gttca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184058 5 + 51301725 gttCA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I a score=8220.000000 s hg38.chr19_GL949753v2_alt 189251 16 + 796479 ggaatcataagttttt s rheMac3.chr19 60056543 16 + 64156825 ggaatcgtaagttttt i rheMac3.chr19 C 0 I 782 s macFas5.chr19 55081875 16 + 59248254 ggaatcgtaagttttt i macFas5.chr19 C 0 I 23 s papAnu2.chr19 47184063 16 + 51301725 GGAATTGTAAGTTTTT i papAnu2.chr19 C 0 I 21 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e panTro4.chr19 59121794 0 + 63644993 C a score=3305.000000 s hg38.chr19_GL949753v2_alt 189267 13 + 796479 ttttttttttttt s macFas5.chr19 55081914 13 + 59248254 ttttttttttttt i macFas5.chr19 I 23 C 0 s papAnu2.chr19 47184100 13 + 51301725 tttcttttttttt i papAnu2.chr19 I 21 I 304 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=250.000000 s hg38.chr19_GL949753v2_alt 189280 5 + 796479 attga s macFas5.chr19 55081927 5 + 59248254 tttga i macFas5.chr19 C 0 I 289 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 189285 654 + 796479 tcattcttgggtgtttctcgcagagggggatttggcagggtcataggacaacggtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcagccttccgcagtgtttgtgtcactgggtacttgagattagggagtggtgatgactcttaacgagcatgctgccttcaagcatctgttcaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatgaaaagtctcccatgtctacctctttctacacagacaccgcaaccatccgatttctcaatcttttccccacctttccccgctttctattccacaaaaccgccattgtcatcatggcccgttctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagtaggggcggccgggcagaggcgcccctcacctcccggatggggcggctggcctggcggggggctgacccccccacctccctcccggacggggcggctggccgggcgagggg e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e ponAbe2.chr19 55998972 1191 + 60714840 I e calJac3.chr22 45468696 1844 + 49145316 I e nomLeu3.chr10 102768410 0 - 106955855 C e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I e panTro4.chr19 59121794 0 + 63644993 C a score=17980.000000 s hg38.chr19_GL949753v2_alt 189939 24 + 796479 GGAATCATAAGTTTTTAACAAATC s panTro4.chr19 59121794 24 + 63644993 ggaatcataagttttTgacaaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000163 24 + 60714840 ggaatcgtaagtttttaaCAAATC i ponAbe2.chr19 I 1191 C 0 s nomLeu3.chr10 102768410 24 - 106955855 ggaatcataagtttttaaCAAATC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45470540 22 + 49145316 GGAATCAT--GTTTTTAACAAAAC i calJac3.chr22 I 1844 I 2 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e papAnu2.chr19 47184113 304 + 51301725 I e macFas5.chr19 55081932 289 + 59248254 I e rheMac3.chr19 60056559 782 + 64156825 I a score=576319.000000 s hg38.chr19_GL949753v2_alt 189963 407 + 796479 AAAA-------TATTTCTAAAAA-CCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAGCAGAGGAGA----CAAACAAAAAGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgttcacacgacgg----tgaattttttttt-ttcttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca s panTro4.chr19 59121818 413 + 63644993 aaaactaaaaatatttctaaaaaacctagaatacgcaggaaagg---ggaaacaacacacagcagaggaga----caaacaaaaaGGCACACCTGAACAcagtcatgcaccgcataacgatgtttcgctccactacacatttcatatgtgatggtatagcctatgtatgcagtaggttataccacgtaggtttg------tgtaagtagact----ctatgatgtttacacgacgg----tgaattttttttt---cttttt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccggctaatttttgtatttttagtagagaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000187 411 + 60714840 AAAA--TAAAATATTTCTAAAAAACCTAGAGTAGGCAGGAAAGG---GGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACACCTGAACAcagtcatgtgccacataatgatgtttcggtacactacacatttcatatgtgatggtatagcctatgtatgtagtaggttataccacgtaggtttg------tgtaagtacact----gtatgatgttcacacaatgg----tgagttgtttttt-ttttttttaatttgagatggag-tctcattc-tgtttcccaggctggagtgaaatggcatgattttggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcttcccaagtagctgggactacaggcgcgtgccacgatggccggctaatttttgtatttttactagagaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768434 413 - 106955855 AAAA--CAAAATATTTCTAAAAACCCAAGAGTAGGCAGGAAAGGGGAGGAAACAACACACAACAGAGGAG--------ACAAAAAGGCACGCCTGAACAcagtcacgtaccgcataacggtgtttcggtccactacacactgcatatgtgatggtatagcctgtgcatgtagtaggttatagcacgtaggtttg------tgtaaatacact----ctgtgatgttcacacaatgg----tgaattttttttttttcttctt--tttgagatggag-tctcattc-tgtctcccaggctggagtgaaatggcacaattttggctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcttcccaagtagctgggattacaggcatgcaccacgatgcccagctaatttttgtatttttagtagagaca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082221 405 + 59248254 -------aaaatatttctaaaaaaccaagagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----cagacaaaaaGGCAAGCCTGAGCACAATCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGtacagcctatgtatgtagtaggttataccacgtaagtttgtgtaattgtaagtacact----ctatgatgttcacacaatag----tgaattttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i macFas5.chr19 I 289 C 0 s papAnu2.chr19 47184417 403 + 51301725 -------aaaatatttctaaaaaaccaacagtaggcagcaaagg---ggaaacaacaaaaaacagaggaga----caaacaaaaaggcaaGCCTGAGCACAGTCAGGTGCTGCAGAACGATGTTTCGATCCGCTACACATTGCGTATGTGATGGTACAGCCTATGTATGTAGTAGGTTATACCAcataggtttgtgtaagtgtaagtacact----ctatgatgttcacacaatag----tgaa--ttttttt-tttttttt--tttgagatggag-tctcactc-tgtctcccaggctggagtgaaatggcacgattttggctcactgcaacctccgcctcccagg---------ttctcctgcctcagcttcccaagtagctgggattacaggtgcgcaccacgatgcctggctaatttttgtatttttagtagagaca i papAnu2.chr19 I 304 C 0 s calJac3.chr22 45470564 406 + 49145316 -------AAAACATTTCTAAAAAACTAAGAGTAAGCAGGAAGTG---GGAATCAGCAAACAACAGAGGAGAGAGGCAAACAAAAAGGCAAGCCTGA-TGCAGTCACGTGCTGCGTAACGGCCTTGCAGTCCGCTACACGTCGCG--TGTGATGACGTAG-CGATGCGCGGACtaggttatatcctgtaggttt-------tgcaagtacgctcgcactatgaggttcgcacagtggtttttgtttttgttttt-gtttttgt--tttgagacagagttttcgctcttgttgcctagac----atgcaatggcatgatctcggctcaatacaacctctacctcccgggttcaa-------tcctgcctccgcttcctgagtagttgggattacaggcatgtgccatgatgcccagctaatttttgtatttttaataaagaca i calJac3.chr22 I 2 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e chlSab2.chr6 46887019 10 + 50890351 I e rheMac3.chr19 60056559 782 + 64156825 I a score=139685.000000 s hg38.chr19_GL949753v2_alt 190370 58 + 796479 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca s panTro4.chr19 59122231 58 + 63644993 gggtttcaccatgttgagcaggctggtctcgaattcccgacctctggtgatccaccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000598 58 + 60714840 gggtttcaccatgttgagcaggctggtatcgaattcccgacctctggtgatccaccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768847 58 - 106955855 gggtttcaccatgttgagcaggctggtctcgaattcccaacctctggtgatccaccca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55082626 58 + 59248254 gggtttcaccatgttgagcaggctggtctcgacctcctgacctctggtgatccaccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184820 58 + 51301725 gggtttcaccatgttgagcaggctggtctcgaactcctgacctctggtgatccaccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887029 58 + 50890351 gggtttcaccatgttgaacaggctggtctcgaactcctgacctctggtgatccaccca i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45470970 58 + 49145316 gggtttcaccatgttggccaggctggtcctgaactcctgacctctggtgatttgcccg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e rheMac3.chr19 60056559 782 + 64156825 I a score=447156.000000 s hg38.chr19_GL949753v2_alt 190428 173 + 796479 tcttggcctcccaaagttctgggattacaggcatgagccaccacgcct------ggccaaaattttttaatgatggctttctcagaacatatccctgtcattaagtgacatacggttgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt s panTro4.chr19 59122289 173 + 63644993 tcttggcctcctaaagttctgggattacaggcgtgagccaccacgcct------ggccgaaattttttaatgatggttttctcagaacatatccctgtcattaagtgacatacgattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAAtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000656 168 + 60714840 tcttggcctcccaaagttctggg-----aggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaacatatccctgtcattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102768905 173 - 106955855 tcttggcctcccaaagttctgggattacaggcatgagccaccacgccc------ggccaaaattttttaatgatggatttctcagaatatatccctgttattaagtgacatacaattgTAATGTCATCAGTGATTACATTAAATATAAGTGATCAAAAAGAGATTACAAGATTGGAttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057341 169 + 64156825 Tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i rheMac3.chr19 I 782 C 0 s macFas5.chr19 55082684 169 + 59248254 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGATCTAAAAGAGATTACAAGATTGGA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47184878 169 + 51301725 tcttggcctcccaaagttctggaattacaggagtgagccatcataccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattCAGTGACACACAATTGTAATGCCATCAgtgattacattaaatataagtgATCTAAAAGAGATTACaagattgga--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887087 169 + 50890351 tcttggcctcccaaagttctgggattacaggagtgagccatcatgccc------agccaaaattttttaatgatgga-ttctcagaacatatccctgtcattcagtgacacatgattgTAATGCCATCAGTGATTACATTAAATATAAGTGACCTAAAAGAGATTACAAGATTGGA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471028 163 + 49145316 tctccgcctctcaaagtgctgggattaccggcgtgagccaccgcgcccggccatggccaacactttttaaagatggatttctcagaacatatgcccgtcattaagtgacatgaa----------cgtaagtgat----ctaaatac-agcaat-tgaaagagattacaagattggattt i calJac3.chr22 C 0 I 142 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T a score=76016.000000 s hg38.chr19_GL949753v2_alt 190601 38 + 796479 tttttttttt---gagacagagtcttgctc-tgttgcccagg s panTro4.chr19 59122462 40 + 63644993 tttttttttt-ttgagacagagtcttgctc-tgttgcccagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000824 41 + 60714840 tttttttttttttgagacagagtcttgctc-tgttacccagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769078 40 - 106955855 tttttttttt-ttgagacagagtcttgctc-tgttgcccaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057510 39 + 64156825 --TTTTTTTT-TTGAGATGGAGTTTCGCTCTTGTTGCCCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55082853 39 + 59248254 --tttttttt-ttgagatggagtttcgctcttgttgcccagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185047 39 + 51301725 --tttttttt-ttgagatggagttttgctcttgttgcccagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887256 38 + 50890351 ---ttttttt-ttgagatggagttttgctcttgttgcccagg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45471191 142 + 49145316 I a score=31453.000000 s hg38.chr19_GL949753v2_alt 190639 11 + 796479 ctgtagtgcag s panTro4.chr19 59122502 11 + 63644993 ctgtagtgtag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000865 11 + 60714840 ctgtagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769118 11 - 106955855 ctggagtgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60057549 11 + 64156825 CTGGAGTGCAG i rheMac3.chr19 C 0 I 2778 s macFas5.chr19 55082892 11 + 59248254 ctggagtgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185086 11 + 51301725 ctggagtgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887294 11 + 50890351 ctggagtgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471333 11 + 49145316 ctgcagtgcag i calJac3.chr22 I 142 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T a score=222255.000000 s hg38.chr19_GL949753v2_alt 190650 104 + 796479 tggtgtgatctcggttcactgcaaccactgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg s panTro4.chr19 59122513 104 + 63644993 tggtgtgatctcggttcactgcaacctctgcctcctgggttcaagcagttctctgcctcagcctccctagtagctgggattacaggtgcctgccaccacacctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000876 104 + 60714840 tggtgtgatcttggttcactgcaacccctgcctcccaggttcaagcaattctctgcctcagcctcccaagtagccgggattacaggcgcctgccaccacgccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102769129 104 - 106955855 tggtgtgatctcggctcactgcaacctctgcctcccgggttcaagcagttctctgcgtcagcctccctagtagctgggattacaggcgtctgccaccaggcctg i nomLeu3.chr10 C 0 I 1977 s macFas5.chr19 55082903 104 + 59248254 tggtgtgatcttggctcactacagcctctgcctcccgggttcaagcaattctctgcctcagcatcctgagtagctgggattacaggtgccggccaccacacccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185097 104 + 51301725 tggtatgatcttggctcactacaacctctgcctcccgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887305 104 + 50890351 tggtatgatcttggctcactacaacctctgcctcctgggttcaagcaattgtctgcctcagcatcccgagtagctgggattacaggcgcctgccaccacaccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471344 101 + 49145316 tggcgccatctcggctcaccgcaacctctgtctcc-ggggtcaagcaattctctgcctc--cctccccagtagctgggattatagacatctgccaccacacctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=171433.000000 s hg38.chr19_GL949753v2_alt 190754 73 + 796479 gccagtttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg s panTro4.chr19 59122617 73 + 63644993 gccaatttttgtatttttagtagagacggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56000980 73 + 60714840 gccaatttttgtatttttagtagagatggggtttcaccatcttggccaggctagtcttgaactcctgaccttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771210 73 - 106955855 gccaatttttgtatttttagtagagacggggtttcagcattttggccaggctagtcttgaactccttgacttg i nomLeu3.chr10 I 1977 C 0 s macFas5.chr19 55083007 73 + 59248254 gctaatttttgtatttttagtagggacggggtttcaccatcttggccagactagtcttgaactcctgaccttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185201 73 + 51301725 gctaatttttgtatttttagtagagacggggtttcaccatcctggccagactagtcttgaactcctgaccttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887409 73 + 50890351 gctaatttttgtatttttagtagagacggggtttcaccatcttggccagactagtcctgaactcctgaccttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471445 73 + 49145316 gctaatttctgtatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctca i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e rheMac3.chr19 60057560 2778 + 64156825 I a score=847624.000000 s hg38.chr19_GL949753v2_alt 190827 292 + 796479 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgaacccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctc------gtccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg s panTro4.chr19 59122690 292 + 63644993 tgatccacccgccttggcctcccaaagtgctgggattacaggcatgagcccccgcgcctggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------ttgttttgagacagggtctc------atccaggctgaagtgctgtggtgcgatctcggctcattgcagcctcgacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i panTro4.chr19 C 0 I 10 s ponAbe2.chr19 56001053 298 + 60714840 tgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagtccccgtgcctggccTGTTGTTTATATTTTATCACATTAAAAAACCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGGCTTGTTAGttgttttg------tttttttgagacagggtctcactgttgtccaggctgaagtgctgtggtgcggtcttggctcactgcagcctcgacctcctgtaccca-agtgatcctcccatctcagcctctc-aagta-gctgtgactacaggtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771283 298 - 106955855 tgatctacccgcctcagcctaccaaagtgctgggattacaggcatgagcccctgcgcctggccTGTTGTTTATATTTTATAACATTAAAAAAGCAGAAGGATGAAAAATGTATTATGCAAACACTAATCAACAGATAATTTCACTGTCTTGTTAGttgttttg------tttttttgagacagtgtctcactgttgtccaggctgaagtgctgtggtgtgatcttggctcaccgcagcctcaacctcctgtaccca-agtgatcctcccacctcagcctctc-aagta-gctgggactacaggtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060338 305 + 64156825 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i rheMac3.chr19 I 2778 C 0 s macFas5.chr19 55083080 305 + 59248254 tgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgaggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185274 305 + 51301725 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcctgttgtttatattttatcacattaAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCTTTTaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagcctcgacctcctgtgcccaaagtgattctcccgcctcagcctctc-aagta-gctggcactacaggtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887482 305 + 50890351 tgatccaccctcctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTGTTGTTTATATTTTATCACATTAAAAAAGCAGACGGATGAAAAATGTATTATGCAAACACTAATCAACAGGTAATTTCACTGGCCttttaattgttttggtttattttttttgagacagggtctcactgttgctcaggctgaagtgctgtggtaccatcttggctcactgcagccttgacctcctgtgcccacagtgattctcccgcctcagcctctc-aagta-gctgggactacaggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471518 297 + 49145316 tgatccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctggcattttatttata-tTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagtt-ttctg------atttttttagacagggtctcactgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgccca-agtgatcctcccacctcagcctccctaagtgcgctggggctacaggtgtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T a score=49923.000000 s hg38.chr19_GL949753v2_alt 191119 22 + 796479 tgccaccacgccggactggttt s ponAbe2.chr19 56001351 22 + 60714840 tgccaccgtgccagactggttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771581 22 - 106955855 tgccaccacgccggactggttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060643 22 + 64156825 tgccgccatgccggactagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083385 22 + 59248254 tgccgccatgccggactagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185579 22 + 51301725 tgccgccatgccggactagttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887787 22 + 50890351 tgccgccatgccggactagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45471815 22 + 49145316 tgccaccatgcctgactagctt i calJac3.chr22 C 0 I 39969 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=125832.000000 s hg38.chr19_GL949753v2_alt 191141 66 + 796479 tattttttgtagagatggggcctcacaatgctgatctgactga-ctcgaactcctgagctcaagcta s ponAbe2.chr19 56001373 66 + 60714840 tattttttgtagagatggggtctcactattctgctccgactga-cttgaactcctgagctcaagcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771603 66 - 106955855 tattttttgtagagatggggtctcactatgctgctccgactga-ctcgaactcctgagctcaagcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060665 66 + 64156825 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactaccgagctcgagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083407 66 + 59248254 tattttttgtagagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185601 65 + 51301725 ta-tttttgtagagatggggtctcactatgctgttcAGACTGA-CTTGAACTGCCGAGCGCGAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887809 66 + 50890351 tattttttgtggagatggggtctcactatgctgttcagactga-ctcgaactcccgagctcgagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511806 65 + 49145316 tatttttagtagagacagggtttcaccatcttgggcaggctggtcttgcactcctgacctcatga-- i calJac3.chr22 I 39969 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e panTro4.chr19 59122982 10 + 63644993 I a score=164320.000000 s hg38.chr19_GL949753v2_alt 191207 59 + 796479 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT s panTro4.chr19 59122992 59 + 63644993 tcctccccacttgccctcccaaagtattgggattacaggtgtgagccactgcacctggT i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56001439 59 + 60714840 tcctccccacttgccctcccaaagtattgggattacaggcatgagccactgcacctggT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771669 59 - 106955855 tcctccccacttgccctcccaaagtactgggattacaggcgtgagccactgtacctggT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060731 59 + 64156825 tcctccccgcttgccctcccaaagtattgggattacagatgtgagccactgcacctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083473 59 + 59248254 tcctccccacttaccctcccaaagtactgggattacagacgtgagccactgcacctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185666 59 + 51301725 CCCTCCCCACTGaccctcccaaagtattgggattacagacgtgagccactgcacctggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887875 59 + 50890351 ccctccccacttaccctcccaaagtattgggattacagacgtgagccactgcacctggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45511871 57 + 49145316 tccgcctgccttggcctcccaaagtgctgggattgcaggtgtg-gccaccacccctgg- i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T a score=7890.000000 s hg38.chr19_GL949753v2_alt 191266 9 + 796479 TATGCTTCT s panTro4.chr19 59123051 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001498 9 + 60714840 TATGCttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771728 9 - 106955855 TATGCTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060790 9 + 64156825 TATGCTTCT i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45511928 5 + 49145316 ----cattt i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C a score=61277.000000 s hg38.chr19_GL949753v2_alt 191275 121 + 796479 --TTTTTAtt------------------------------------------------------------ttttttct---ttctttttttttt--tttttcgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcatgcc s panTro4.chr19 59123060 121 + 63644993 --TTTTTAtt------------------------------------------------------------atttttct---ttctttctttttt--ttttccgagacggaatctcactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctctgcctcccgggctcacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001507 112 + 60714840 --tttttatt-------------------------------------------------------------tttttct---ttctttttttt----------gagatggaatctcactctgttgcccaggccggagtccagtggtgcgatcttggctcactgcaagctccgcctcccgggttcacacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771737 128 - 106955855 --TTTTTATTTTTTtc-----------------------------------------------------tttctttct---ttctttttttttt--ttttttgagacagaatcacactctgccacccaggctggagtgcagtggcgtgatctcagctcactgcaagctctgcctcccgggctcacgcc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45511933 186 + 49145316 tatttatatTTATCACATTAAAAAAACCGAAGGTTGAAAAATGTATTATGCAAACACGAATCAACAGATAATTTCACTGGAtttttagttttctgatttttttagacagggtctca--ctgttgcccaggctggagagctgtggtgtgatcttggctcactgcagcctcgacctcctgtgcccaagtg i calJac3.chr22 C 0 C 0 e mm10.chr7 3716911 4822 + 145441459 T e canFam3.chr1 103003719 4672 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=150522.000000 s hg38.chr19_GL949753v2_alt 191396 200 + 796479 attctcctgcctcagcctcctgagtagctgggactataggcactcgccaccacgcccggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcat---cagcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT s panTro4.chr19 59123181 200 + 63644993 attctcctgcctcaacttcctgagtagctgggactataggcacccgccaccacgcccggctaatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcgtg--atccgcccgcct---cggcctcccaaagtgctgagattataggcgtgagccaccgcgcccggccTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001619 200 + 60714840 attctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccgcgcctggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtgtcgatctcc-------------------------cgacctcatg--atccgcccacct---cggcctcccaaagtgctgagattacaggcgtgagccaccgcgcccggccTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102771865 200 - 106955855 attctcctgcctcagcctcccgagtagctgggactataggtgcccgccaccacgcccagctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcc-------------------------tgacctcatg--atccgcccgcct---cggcctcccaaagtgctgagattataggcatgagccaccgcgcccggccTATT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45512119 191 + 49145316 atcctcccacctcagcctcccaagtcgctggggctacaggtgtgtgccaccatgcctgactagctt-----tactttctggagaggttgggtctcacgatgctgctcaggctggctgcaa-ctcc-------------------------tgagctcaagccatcctccccact---tgccctcccgaagtgttgggattacaggcgtgagccactgtacctggT----- i calJac3.chr22 C 0 C 0 s mm10.chr7 3712089 210 + 145441459 atttgcctggctctacctccttagtt-ctgagatggaaggcatgcaattccaagcttggcCTATtgatt--catttttagaaagggtctagt------gtgtt--ccaggctggcctcttactcctaggctatgtagctgaaaatgaccttgacctcttg--accctccctcctttccactcctctaaaatgctgggatttcaggtgtgttctac----cCTGGCCT--- i mm10.chr7 T 4822 C 0 e canFam3.chr1 103003719 4672 + 122678785 T e chlSab2.chr6 46887934 0 + 50890351 C e papAnu2.chr19 47185725 0 + 51301725 C e macFas5.chr19 55083532 0 + 59248254 C e rheMac3.chr19 60060799 0 + 64156825 C a score=21980.000000 s hg38.chr19_GL949753v2_alt 191596 9 + 796479 TATGCTTCT s panTro4.chr19 59123381 9 + 63644993 TATGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001819 9 + 60714840 TATGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772065 9 - 106955855 TATGCTTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55083532 9 + 59248254 TATGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185725 9 + 51301725 tatgcTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887934 9 + 50890351 TATGCTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512310 9 + 49145316 TACGCCTCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3712299 0 + 145441459 C e canFam3.chr1 103003719 4672 + 122678785 T e rheMac3.chr19 60060799 0 + 64156825 C a score=6552.000000 s hg38.chr19_GL949753v2_alt 191605 2 + 796479 TA s panTro4.chr19 59123390 2 + 63644993 TA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001828 2 + 60714840 TA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772074 2 - 106955855 TA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060799 2 + 64156825 TA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083541 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185734 2 + 51301725 TA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887943 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512319 2 + 49145316 TA i calJac3.chr22 C 0 I 57 e mm10.chr7 3712299 0 + 145441459 C e canFam3.chr1 103003719 4672 + 122678785 T a score=128964.000000 s hg38.chr19_GL949753v2_alt 191607 57 + 796479 ATTTTCCCATGTCATAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAAC s panTro4.chr19 59123392 57 + 63644993 ATTTTCCCATGTCGTAAGTTCGATGTATAATATTTACATTATCATTCAGTTTAAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001830 57 + 60714840 AGTTTCCcatttcataagtttgatgtgtaatatttacattatcattcaatttaaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772076 57 - 106955855 ATTTTCCcatttcgtaagtttgatgtgtaatatttacattatcattcagtttaaaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060801 57 + 64156825 ATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083543 57 + 59248254 ATTTTCCCATTTCGTAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185736 57 + 51301725 ATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46887945 57 + 50890351 ATTTTCCCATTTCATAAGTTCGATGTGTAATATTGACATTATCATTGAATTTAAAAC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712299 21 + 145441459 -------------------TTGGTGGCTAAT-----------------GTTTAAAAc i mm10.chr7 C 0 C 0 e canFam3.chr1 103003719 4672 + 122678785 T e calJac3.chr22 45512321 57 + 49145316 I a score=401630.000000 s hg38.chr19_GL949753v2_alt 191664 158 + 796479 ATTCACT--------------Gttt-ttttttttagagacaaggtctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcctgagtaccacacccg-----------------gcctttac s panTro4.chr19 59123449 157 + 63644993 ATTCACt---------------ctt-ttttttttagagacaagttctcgctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttatgttcaaggaatcctccccactcagcctcctgagtaCCACACCCG-----------------GCCTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56001887 170 + 60714840 attCACTCACtcttttttttttttt-ttttttttagagacaaggtcttgctctgtcacacaggctggagtgcagtggcacagtc--agctcactgcagcctcagcagccttaacttcttgtgttcaaggaatcctccccactcagcctcccgagtaCCACACCCG-----------------GCCTTTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772133 159 - 106955855 attCACT-------------CAtct-ttttttttagagacaaggtctcgctctgtcccataggctggagtgcagtggcacagtcatagctcactgcagcctcagcagccttaacttcttgtgctcaaggaatcctccctactcagcctcctgagtaCCACACCCG-----------------GCCTTTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60060858 151 + 64156825 ATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaaacctcccgactcggcctcccgagtaCCACACCTG-----------------GCCTTTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083600 151 + 59248254 ATTCACT-------------CACtc-tttttttt--------ggtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcttcccgagtaCCACACCTG-----------------GCCTTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185793 152 + 51301725 ATtcact-------------cactcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagCCTGAACCTCTTgtgttcaaggaatcctcccgactcagcctcccgagtgccacacctg-----------------gcctttac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888002 152 + 50890351 ATTCACT-------------CACtcttttttttt--------tgtctccctctgtcacacaggctggagtgcagtggcacagtcatagctcactgcagcctcggcagcctgaacctcttgtgttcaaggaatcctcccgactcagcctcccgagtGCCACACCTG-----------------GCCTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512378 156 + 49145316 ATTCACt----------------ct-tttttttaagagacaaggtctcgatctatcacacaggctggagtgcagcggcagagtcatggctcactgcagcctcagcatccttaacctcttgggttcaaggcattctcccgactcagcctcccaagtGCCACAACTG-----------------GCCTTTAT i calJac3.chr22 I 57 C 0 s mm10.chr7 3712320 118 + 145441459 ------------------------------------------------actctgtagcccaggttggcatgaaattcactag--atgactcaccatggccaca----------------------aaacaaattcccctcgtcagcctcctgtgggttggaattgtggggctgtgcaacagtgcctgTAA i mm10.chr7 C 0 C 0 e canFam3.chr1 103003719 4672 + 122678785 T a score=16127.000000 s hg38.chr19_GL949753v2_alt 191822 5 + 796479 gtctg s panTro4.chr19 59123606 5 + 63644993 GTCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002057 5 + 60714840 GTCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772292 5 - 106955855 GTCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061009 5 + 64156825 GTCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55083751 5 + 59248254 GTCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47185945 5 + 51301725 gtctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46888154 5 + 50890351 GTCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45512534 5 + 49145316 GTCTG i calJac3.chr22 C 0 T 35775 s mm10.chr7 3712438 5 + 145441459 ATTTT i mm10.chr7 C 0 I 56 s canFam3.chr1 19700859 5 - 122678785 gtctc i canFam3.chr1 T 23254 C 0 a score=192959.000000 s hg38.chr19_GL949753v2_alt 191827 75 + 796479 tttttgttttttgtttttttgtTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG s panTro4.chr19 59123611 72 + 63644993 TTTTTTTTTTTT---TTTTTGTTATT-AACTCA-TTGATTGTTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGGGACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002062 73 + 60714840 TGTTTTTTTTTT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772297 73 - 106955855 TGTGTTTTTTTT--TTTTTTCTTATT-AACTCA-GTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061014 68 + 64156825 -----TTTTTTT--ttttttcttatt-aactca-ttaattattgagaagtctgttgcttt-atttccaaaatgcgacg i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55083756 69 + 59248254 ----TTTTTTTT--TTTTTTCTTATT-AACTCA-TTAATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47185950 73 + 51301725 tttttttttttt--ttttttcttatt-aactcA-TTGATTATTGAGAAGTCTGTTGCTTT-ATTTCCAAAATGCGACG i papAnu2.chr19 C 0 I 315 s chlSab2.chr6 46888159 68 + 50890351 -----TTTTTTT--ttttttcttatt-aactca-ttgattattgagaagtctgttgcttt-atttccaaaatgcgatg i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712499 68 + 145441459 TTCCCTTCCATT--TCATTTCTCATT----TCACTTGATTATTGAGAAATCTCTAGCTTT-ATTTCCAAACTCTG--- i mm10.chr7 I 56 C 0 s canFam3.chr1 19700864 74 - 122678785 -atttccatttt--ggttttctcattaaattcc-tggattattgagaagtccactgctttaatttccatagtgtaggg i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=455289.000000 s hg38.chr19_GL949753v2_alt 191902 163 + 796479 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGGTCTGCGT s panTro4.chr19 59123683 163 + 63644993 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCATGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCACTG----GTGTCCACTGTGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGGTCTGCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002135 163 + 60714840 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCATCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGCTCCTGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAATGTAGGGTCTGTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772370 161 - 106955855 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTATCCTCGTGGTC--TGTTAGGGGTCCAGGCTGACTGGGGTTCATTG----GTGTCCACTGGGGGCAGTTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTCCTGAGTGTGGGGTCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60061390 160 + 64156825 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCTCGTGCCTTCAGCAGTCCCGAGTCTC---CTGCTGAGTGTGGGGTCTGGGT i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55084139 160 + 59248254 ATATTAGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCCGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCCGAGTCTC---CTGCTGAGTGTGGGGTCTGGGT i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47186338 163 + 51301725 atattaGTCATCTTTGAG-------TCAGGTGAGTCCCACAAGTTCCCAGCGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGACTGGGGTTCACTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCCGAGTCTCCTTCTGCTGAGTGTGGGGTCTGGGT i papAnu2.chr19 I 315 M 779 s chlSab2.chr6 46888227 163 + 50890351 atattagtcatctttGAG-------TCAGGTGAGTCCCACAAGTTCCCAGTGTCTCCTCGTGGTCTGTGTTAGGGGTCCAGGCTGTCTGAGGTTCATTG----GTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCTGAGTCTCCTTCTGCTGAGTGTGGGGTCTGGGT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712567 126 + 145441459 ATGTTACTTAAAGTGCAG-------TCACGT---TTCCAAAAGTTCCCAGAGTCCCTTGGAGGTCTCTGCTAGGCATCCTGGCAGGCAGGGGGTCATTGCTCCATGTCC-TTGGGAACAGCCTCTGGAC---GAGCAGCC---------------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19700938 144 - 122678785 atattagctatctttGAGGGCAGAATTGGGTGACTTGCAAAGGGTCCCAGGAGTTACTAGTGGTCTGTGTGAGGAGTCCAGGCTGGCTGG-------TA----GCACCCACTATGGGCAGGTCCTGTGCCTTC------CTTGGGTC-------------CGTGGGGTCTGGGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T a score=679444.000000 s hg38.chr19_GL949753v2_alt 192065 269 + 796479 ACCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCCGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGAGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGTAAGGAACGTGGTGGGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTG s panTro4.chr19 59123846 269 + 63644993 GCCCCCC-GGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCTGTCTAAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTCGGGGAGGCCTGGGGGTCTGGAGAGGAAAGGACTCACCTGAGTGTCCATCTGCCTGTCCTCTTCCGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002298 270 + 60714840 CCCCCCCTGGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGCCTCAGCTGGAGGTTCCCGTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGAGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTAAGTGCCCATCTGCCTGTCCTCTTCTGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102772531 269 - 106955855 CCCCTCT-GGGCTAATGGATGGCCAGTGTGGCATAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCGTCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCTGCCTG i nomLeu3.chr10 C 0 M 1242 s rheMac3.chr19 60061550 269 + 64156825 CCCCACC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCATAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACGTGGTGGGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCGGCCTGTCCTCTTCCGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084299 269 + 59248254 CCCCACC-GGGCTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGGTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGGGGAGAGTGAGAGGGAAGGAACATGGTGGGGGTGGGGGAGGGTTGGGGGCCTGGAGAGGAAAGGACCAGCCTCAGTGTCCCTCTGCCTGTCCTCTTCCGCCTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46888390 268 + 50890351 CCCCTCC-GGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCGGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTAGGGGAGAGTGAGAGGGAAGGAACGTGCT-GGGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTGAGTGTGCATCTGCCTGTCCTCTTCCGCCTG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712693 247 + 145441459 ---------------------GCCAGAGTAGCATATACACTGGGCTCCTCTGGGGCTTCCCCTGCCTGGGAGAGAGGAGATGCAGCTGCCCCCTGTCTGAGTGTCCTGCTGCACAGCTGGGCATAGGTCACATCCTGGGACTCCCCAGATTCGGCAGCCTGGAGTGGGAGAGGGTGAGAGA-AAGGTATGTGAT-TTGCTTGGGGAAACCTGCAGGTCTGTGGAGGACAGGACCCACCTGATTGTTTGCTCCTTGGCCCTCTTCTGCTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19701082 269 - 122678785 CCTTCCT-GGGCTAGTGAATGGCCAGAGCAGCATACACGCTGGGCTCTGCTGGGGGCTCCCCTGACTGGGAGGGAGAGGATGCACTTGTCTTCTGTCTGAGGGTCAAGTGGTTCAGCTGAGCGTAGGTCACATCTGGGGGGGCGTCAGATGCAGCAGCCTGCAGCAGGGGAGAGTGAGAGGGGAGGTTGGTGTTGGGGTGGGGGGAAGCCAGGGTGATCAGAGAAGACAGGGCCCACCTGACTGTCCATCCACCTATCTTCCTCTGCTTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M a score=421427.000000 s hg38.chr19_GL949753v2_alt 192334 266 + 796479 TCTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGAGGAGGGAGGAGAGGCCATTTCTCTCCTAGGACTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCGGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct s panTro4.chr19 59124115 266 + 63644993 TGTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGGGGAGGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATTGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCCCACTGTTCCCCGGGTGAT-----------------CCGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002568 266 + 60714840 TGTGTCCTTTGTGTCCAGGAATTCCTCAGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACTGGGGCATATGTCATTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGG-------G-----GTGTCCTTGAATCCCCCT---GACCTCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60061819 266 + 64156825 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGTCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CTGATTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55084568 266 + 59248254 TGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCGTATGTCACTGCCTGGGGGTCTTCATCGTGTGGCCTCTGCTGGAGAAAGACACTGGTGGGG-------G-----GTGTCCTTGAGTCCCCCT---GACCCCCTGGAGTCAATTTTCTTCACTGTTCCCAGGATGAT-----------------TCGACTACATCCCT---TTCCTGATGGAATCT-CAGGGACGCCCGAAGGCCGTGGAGggtct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46888658 266 + 50890351 TGCGTCCTTTGTGTCCAGAAATTCCTCGGACAGTGGGGAGGGAGGAGAGGCCACTCCCCGCCTGAGTCTGGAGTGTT------TCACCTGGGCATGTGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACACTGGTGGGG-------g-----gtgtccttgaatccccct---gaccccctggagtcaattttcttcactgttcccagggtgat-----------------ccgattaTATCTCT---TTCCTGATAGAATCT-CAGGGATGCCCTAAGGGCGTGGAGggtct i chlSab2.chr6 C 0 C 0 s mm10.chr7 3712940 250 + 145441459 TTCATATTCTGTGTTCAGTTGTTCCCTTGACATGACAGAAGGTGAGACATGTCCTGCCTTCCTGAGCCTGGAGGGTT------TCACCTGGGCATAAGTCTCTCCCTGGGGATCTTCCTCAGGTGGTGTCTGT---AGCAAGGAAGTAGTGAGGTACAGACA-----GTGTCTTCCTGTTCCCCTGGGGATCTTCTTTGGCCAGTTTCCATAGC-ATGGCTAGAGTGAC-----------------CTGTTTAGATTACTGCCTCTCTGATGGGAACT---------TCCT----------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701351 293 - 122678785 TCTGTCCTCTGAGTCCTGTAATCCTCCTGAAAGGGAGGAAGGAGGAGTGGCCAGGACCTGCCTGGGACTTGATCATTAGTAGCTCACCTGGGCGTACATGTCTCCATGGGGTTCTTCATCCTGTGTGTTCTTCTGCAGACAGACAGTGAGGGGG-------AGGTTTgtctccttgaattcactc---catcactt-cagtcaatttgccacactgtggccagagtgatgctttcaaactttcaggcagattaggtcact---ttcctgctggactctgcagggacttcctga-gccttgaagcatgt i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e nomLeu3.chr10 102772800 1242 - 106955855 M e papAnu2.chr19 47186501 779 + 51301725 M a score=55846.000000 s hg38.chr19_GL949753v2_alt 192600 23 + 796479 ggccgctccctccctgtggttct s panTro4.chr19 59124381 23 + 63644993 ggccgctccctccctgtggttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002834 23 + 60714840 ggccgctccctccctgtggttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774042 23 - 106955855 GGCCGCTCCCTCCCTGTGGTtct i nomLeu3.chr10 M 1242 C 0 s rheMac3.chr19 60062085 23 + 64156825 GGCCGCTCCCTCCCTGTGGTTCT i rheMac3.chr19 C 0 I 43517 s macFas5.chr19 55084834 23 + 59248254 ggccgctccctccctgtggttct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46888924 23 + 50890351 ggccgctccctccctgcggttct i chlSab2.chr6 C 0 C 0 s mm10.chr7 3713190 21 + 145441459 GG--GTTTCCTTCTTACAGTTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19701644 22 - 122678785 -gatgttttctttctatggctct i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M a score=88376.000000 s hg38.chr19_GL949753v2_alt 192623 50 + 796479 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcaca-gg s panTro4.chr19 59124404 50 + 63644993 ggcctctgctcctcactctga-ccttgcccatttggctgcagcctcacg-gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002857 51 + 60714840 ggcccctcctcctcactctga-ccttgcccatttggctgcagcctcacgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774065 51 - 106955855 ggcctctcctcctcattctga-ccttgcccatttggctgcagcctcacgcgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60105625 50 + 64156825 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i rheMac3.chr19 I 43517 T 43560 s macFas5.chr19 55084857 50 + 59248254 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctcacacg- i macFas5.chr19 C 0 I 1 s chlSab2.chr6 46888947 50 + 50890351 ggcctctcctcctcactctga-ccttgcccatttggctgcagcctaatgcc- i chlSab2.chr6 C 0 I 2 s mm10.chr7 3713211 50 + 145441459 -AGCTTAACCTGACATTCAGACCCTTGCTGTCTTGGCTCTAGCCACACAGT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19701666 50 - 122678785 -ggttctattcctgacactgtttcttgcccatttgccaccagccatatgac- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M a score=7579.000000 s hg38.chr19_GL949753v2_alt 192673 5 + 796479 ---ccttc s panTro4.chr19 59124454 5 + 63644993 ---ccttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002908 5 + 60714840 ---ccttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774116 5 - 106955855 ---ctttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084908 5 + 59248254 ---ccttc i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46888999 5 + 50890351 ---ctttc i chlSab2.chr6 I 2 C 0 s mm10.chr7 3713261 5 + 145441459 ---CCATC i mm10.chr7 C 0 I 326 s canFam3.chr1 19701716 8 - 122678785 ccatgttc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M e rheMac3.chr19 60105675 43560 + 64156825 T a score=67546.000000 s hg38.chr19_GL949753v2_alt 192678 49 + 796479 ctgcaagagctcgctgctgcctgggggcctttgcacggctgtttcctct s panTro4.chr19 59124459 49 + 63644993 ctacaagagctcgctgctgcctcggggcctttgcacggctgtttcctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002913 49 + 60714840 ctgcaagagcttgctgctgcctcggggcctttgcacggctgtttcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774121 36 - 106955855 -------------ctgctgcctcggggcctttgcacggctgtttcctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084913 49 + 59248254 ctgcaagagctcgctgctgcctcggggcctttgcacggctgtttcttct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46889004 49 + 50890351 ctgcaagagctcgctgctgcctcaggacctttgcacggctgttgcctct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19701724 44 - 122678785 ctgaaaaaccatgttgttgcctcaggacctttgcac-----ttgctact i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M e rheMac3.chr19 60105675 43560 + 64156825 T a score=155847.000000 s hg38.chr19_GL949753v2_alt 192727 122 + 796479 gcctgcaggggctcgtctatcagaggatcatgtgccccactctgtccaggcttctcagatgacagctgagcagacagccctccccttccattcagactggccccactgccccacactctctg s panTro4.chr19 59124508 122 + 63644993 gcctgcaggggctcgtccattagaggatggtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttccattcagactggccccactgccccacactctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56002962 122 + 60714840 gcctgtagggtctcgtccattagaggatcgtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttccattcagactggccccactgccccacactctctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774157 122 - 106955855 gcctacaggggctcgtctattagaggatcgtgtgctcccctccgtccaggcttctcagatgacagctgagcacacagccctccccttccattcagactggccccactgccccacactctctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55084962 120 + 59248254 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttacattcagactggccccactgccccaca--ctctg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46889053 120 + 50890351 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaagcttctcagatgacagctgagcagacagccctctccttacattcagactggccccactgccccaca--ctctg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e canFam3.chr1 19701768 0 - 122678785 C e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M e rheMac3.chr19 60105675 43560 + 64156825 T a score=365438.000000 s hg38.chr19_GL949753v2_alt 192849 271 + 796479 ccctttccctggtgtatgttcctta-cagcacgttgcactcctggacacgatgca-tttatttgcattttgtctccca-ccatgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccatggggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGGGACGG-AGGTGGTTCATTTATTCGT-CATCCTCctgaggcctgggga-gagctctaacaaccagacgg s panTro4.chr19 59124630 271 + 63644993 ccctttctctggtttatgttcctta-cagcacgttgcactcctggacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccacagggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGAGGAGCCCAGGAGACGA-AGGTGGTTCATTTATTCCT-CATCCTCCTGATGGCTGGGGA-GCGCTCTAACTACCACATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003084 267 + 60714840 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacggcgca-tttatttgcattttgtctccca-ccacgaggtgagctca-ggaggcgggggcggctttgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagttccc-gggaacactcgctggatgaatgaatGAAGGGGAGCCTGGGGGACCA-GGGTGGTTCATTTATTCCT-CA---TCctgaggcctgcgga-gcgctctaacaaccagatga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774279 270 - 106955855 ccctttccctggtttatgttcctta-cagcacgttgcactgctggacacggtgca-tttatttgcattttgtctccca-gcacgaggtgagctca-ggaggcgggggcggctctgctccctgctgcgtctgcagctcccacggggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACT--GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55085082 268 + 59248254 ccctttccctggtttatgtttctta-cagcacgttgcactgctggacac--tgca-tttatttgcattttgtctccca-ccacgaggtgagctca-ggaggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccgatccacagtgagctcct-gggaacactggctggatgaatgaatgaaGGGGAGCCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagacgg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46889173 270 + 50890351 ccctttccctggtttatgtttctta-cagcacgttgcactcctgcacatggtgca-tttatttgcattttgtctccca-ccatgaggtgagctcc-ggaggcgggggtggctctgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagctcct-gggaacactcgctggatgaatgaatgaaGGGGAGCCCAGGGGAGCA-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcgctctaaccaccagacgg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19701768 272 - 122678785 cccATATCTTGTTTTATATTTCTTAGCCTCACTTTGTGCTTGAGGATGC--TGCAGCTTCTTTGCATATTGTCTGACACCCACAAGGAGAGCTCACTGAGTATGGTTCAGTTTTGCTTACTGTTGAGCTTGCAAC-ACTAGGTGGGGCCTGGT-AATATTAGACTGCTCGTGCTCCTCTGCTGAGTGAATGAATGAAGGAG-GCCTAGAGACTTGTGGGTGATTCACTTCTTCATGCACCCTGTTGAGATCTGGGTATGCATCCCAACAACAAGAAG- i canFam3.chr1 C 0 C 0 e mm10.chr7 3713266 326 + 145441459 I e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M e rheMac3.chr19 60105675 43560 + 64156825 T a score=305556.000000 s hg38.chr19_GL949753v2_alt 193120 208 + 796479 ccaaacagaggatgaggag-caggaaggggac-----ccgggaggaggcccacgaggtcccaggacag-cagaagagagtgaggtcacagcaggcgggaggcagcatgctggaca------aggagg--ggtccac-cgt-gacgatgctgagagccgggggaa--ggaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcctgggac s panTro4.chr19 59124901 208 + 63644993 CCAAACAGAGGCTGAGGAG-CAGGAAGGGGAC-----CCGGGAGGAGGCCCACGAGGTCCCAGGACAG-CAGGAGAGAGTGAGGTCGCAGCAGGCGGGAGGCAGCATGCTGGACA------AGGAGG--GGTCCAC-CGT-GACGATGCTGAGAGCCGGGGGAA--GGAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGG--CCTTTGGTGCCTGGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003351 208 + 60714840 ccaaacagaggatgaggag-caagaaggggac-----ctgggaggaggcccacgaggtcccaggacac-caggagagagtgacgtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtccac-cat-gacgatgctgagagccaggggag--ggaggacagagaagtcc-ttcaggattagatctgacactgggagg--cctttggtgcccgggac i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102774549 208 - 106955855 ccaaacagaggacgaggag-caggaaggggac-----ccgggaggaggcccacgaggttccaggacag-caggagagagtgaggtcgcagcaggcgggaggcagcgtgttggaca------aggagg--ggcccac-cgt-gacgatgctgagagccgggggaa--ggaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcccgggac i nomLeu3.chr10 C 0 I 1 s macFas5.chr19 55085350 207 + 59248254 ccaaacagaggaggaggag-caggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcgggaggcagcgtgctggaca------aggagg--ggtccac-cgt-gatgatgctgagaaccggggga---agaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcccgggac i macFas5.chr19 C 0 I 1 s chlSab2.chr6 46889443 207 + 50890351 ccaaacagaggaggaggag-cgggaaggggac-----ccgggaggaggcccgcgaggtcccaggacag-caggagagagtgaggtcacagcaggcaggaggcagcgtgctggaca------aggagg--ggtccac-cgt-gatgatgctgagaaccgggaaa---ggaggacagagaagtcc-tgcaggattagatctggcaccaggagg--cctttggtgcctgggat i chlSab2.chr6 C 0 I 1 s mm10.chr7 3713592 210 + 145441459 CCAGACACATGCTAAAGAGCCAGAAAGGGGACAGGAGCTGGAAGAA-----ACATGGTCCCAGGAAAACCAGGAGAGAGTGAGG-CATAGAACCCAGGAGGCAG-GTGCTGGGCATAGGGCGGGAGT--GGTCAGC-TTTGGATATTGCTGAGGGCTGAGGGAGGCAGAAGAAAGAAGAGCCC-TGT---ACTAAGCTTGGCCCTAAGG------TTTAGCACTGTGGAT i mm10.chr7 I 326 I 1 s canFam3.chr1 19702040 180 - 122678785 TCAGACAGTGGATGGGTAG-CCAGACA----------TGGGGAGGAGGGCC------------------CAGGAG--------GTCACAGCGGG-ATGACCCAG-GTGCCCAAGA------AGGGAGAAGGTACACGTGG-GACAGAGCTGAGACAGGGTGGTG--TGAGGACAGAGAAGCATGTGTCAGATTAAGTTTGGCACCAAGAGGACCCTATGGTCCAGATG-- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M e rheMac3.chr19 60105675 43560 + 64156825 T a score=433991.000000 s hg38.chr19_GL949753v2_alt 193328 213 + 796479 -GGGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCCTGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCTGGT-----TCTCTGAGACCTCTCAGTCCTGCTGGCCCCCTGCCCTGCTCCCAGATGGGGCCACCGA-ATGCAGGGAGGTCCCACAGTGTGG---GGCAAGACCATCTTCCACG--------GAGC----CCCAGA s panTro4.chr19 59125109 213 + 63644993 -GTGGCGGG-ATCTCACCTGACTGTCCAGCTCCACCTGGTCCTCAGACTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCTTGGT-----TCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACCAAGATGCAGGGAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003560 213 + 60714840 -ggggcagG-GTCTCACCTGAGTGTCCAGCTCCACTCCGTCCTCAGGCTGTGTGTCCTTCACAGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCTGGT-----TCTCTGAGACCTCTCAGTCCTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCTAGGGAGGTCCCACAGTGTGG---GGCGAGACCATCTTCCATG--------GAGC----CCTAGA i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102774758 213 - 106955855 -agggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGACTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCTGGT-----TCTCTGAGACCTCTCAGTCTTGCTGG-CCCCTGCCCTGCTCCCAGATGGGGCCACTGAGATCCAGGGACGTCCCACAGTGTGG---GGCAAGACCATCTTCCACG--------GAGC----CCCAGA i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60062115 217 + 64156825 -GGGGCGGG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCCGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGGGAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i rheMac3.chr19 T 43560 C 0 s macFas5.chr19 55085558 217 + 59248254 -ggggcggG-GTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGAAACAGCAAGGGCTTCGTCTCCTGGGAAGGATCCCTGAGAGCTCTCAGTCCTGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGGGAGGCCCCACAGTGGGG---GGCGAGACCATCTTCCACG--------GAGC----CCCAGA i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46889651 217 + 50890351 -ggggcggG-GTCTCACCTGACTTTCCAGCTCCACCCCATCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCAGGGACAGAGCAAGGGGTTTGTCTCCTGGGAAGGATCCCTGAGACCTCTGAGTCCCGCTGG-CCCCTGCCCAGCTCCCA-CTAGGGCCACTGAGATCCAGGGAGGTCCCACAGTGGGG---GGCGAGACCATCTTCCATG--------GAGC----CCCAGA i chlSab2.chr6 I 1 C 0 s mm10.chr7 3713803 210 + 145441459 -AGGACAGGTGCCTTACCCAGCTGTTCAGCTCCACTCCATCCTCAGTTTGCATGTCCTCCACTGAAGCATCTGTCATAGCAGAACACATAGGATGTCTCCTGACTAGAGTCTA-GGGCTGTCTCAGACCCCTAGT-TTCCTGCCTTGCTCCAGGTTGGG---ACAGAGAATCAGGGAAAGCT---------G---GGACATCCCTGCTTCCATC--------AAGTGAAGTTCAGA i mm10.chr7 I 1 I 14 s canFam3.chr1 19702220 224 - 122678785 GGAGTGGGG-GTCTCACCCGATGGTCCAGCTCGACCCCTTCCTCAGGCCATGTGTCTTGCACAGCAGCATCTG-TGGAGTAGAAC--GGGGTGTGTGTCTTGGC-GGGTTCCCTGAGCTCTCTCAGGGGTGCAGA--CCCTGACCTGCTCCCAGATGAGGAGGCTGTGACCCAGGG-GATCCAGGGGTGAGGTTAGGTGCTAAGATCATGCATGTGGGAATTGAGT----CCTTAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45512539 35775 + 49145316 T e papAnu2.chr19 47186501 779 + 51301725 M a score=908552.000000 s hg38.chr19_GL949753v2_alt 193541 358 + 796479 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTCT------------------------------------------------------------------------------------------CTCCAG--CACCCCCATTTGTCCC--------------------------CTCTCTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGAG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGT-GGTGGGTGGGAGTCTG-TGGTCTTTGGGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CT-CCCATTCTACACATGCAACTTGAGGGAAAGAAG s panTro4.chr19 59125322 357 + 63644993 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTCT------------------------------------------------------------------------------------------CTCCAG--CACCCCCATTTGTCCC--------------------------CTCTCTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCCGGACCTGGGG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-AGTGGGTGGGAGTCTG-TGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGTCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACATGCAACTTGAGGGAGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56003773 357 + 60714840 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTCT------------------------------------------------------------------------------------------CTCCAG--CACCCCCAGTTGTCCC--------------------------CTCTCTTCCTCTTACAGAGCTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGAG-GAGGAAACGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCACAGCCGCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACATGCAACTTGAGGGAAAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102774971 357 - 106955855 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGGGACTCCTGTCT------------------------------------------------------------------------------------------CTCCAG--CACCCCCATTTGTCCC--------------------------CTCTCTTCCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGGGCTGGACCTGGGG-GAGGACATGGGAGTGT--GA-GGGGCAGTG-TATGGGCTGC-GGTGGGTGGGAGTCTG-GGGTCTTT-GGGCA-GAATTACCTCCTCAGCAGGCTCCTGTCCTTGGGCTCTGGCTCTGCAGCCTCTGCAGGACGCTGGGAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACATGCAACTTGAGGGAAAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062332 350 + 64156825 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGG-------GTCT------------------------------------------------------------------------------------------CCCCAG--CACCCCCATTTGTCCC--------------------------TTCTCTTTCTCTTACAGAGGTTTTCTTCCTGGATGTCAGCAGCTGCGCTGGACCTGGGG-GAGGACACAGGAGTGT--GA-GGGGCAGTC-TATGGGCTGT-GGCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCTGCAGCCCCTGCAGGATGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTGAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACAGGCAACTTGAGGGGAAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55085775 350 + 59248254 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGG-------GTCT------------------------------------------------------------------------------------------CCCCAG--CACCCCCATTTGTCCC--------------------------TTCTCTTTCTCTTACAGAGGTTTTCTTCCTGGACGTCAGCAGCTGCGCTGGACCTGGGT-GAGGACACGGGAGTGT--GA-GGGGCAGTA-TATGGGCTGT-TTCGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTTCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACATGCAACTTGAGGGGAAGAAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46889868 350 + 50890351 CCCTTCCCAGCCCCTCCCTGTTGCTACTGAAATTTTGG-------GTCT------------------------------------------------------------------------------------------CCCCAG--CACCCCCATTTGTCCC--------------------------TTGTCTTTCTCTTACAGAGATTTTCTTCCTGGACGTCAGCAGCTGTGCTGGCCCTGGGG-AAGGACACGGGAGTGT--GA-GGGGCAGTA-TATGGGCTGT-GGTGGGTGGGAGTCTG-GGGTCTTC-AGGCA-GAATTACCTCCTCAGCAGGCCCCTGTCCTTGGACTCTGGCTCCGCAGCCCCTGCAGGACGCTGGAAATCAGTCTTCCTCTGGTCTGGGTGAAGATGGACAGAGTCTCAGCCCTGGGAACATTAGAA-CC-CCCATTCTACACATGCAACTTGAGGGGAAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45476764 475 + 49145316 CCCTTCCCAGCCCCTCCCTCTTGCTAATGAAATGTTGGGActcctgtcttctctccagccccccatttggccctcccatccccccagccccccatttgtccctcccgtcccttcagcacccccatttgtccctcccgtcccccag--cacccccatttgtccctcctttccccccagccccccatttgtccctcttcctctcACAGAGGTTTTCTTCCGGGACATCAGCAGCTGGGCTGGACCTGG---GAGGACACAGGAGTGTGAGA-GGGACAGGG-TACGGGTGGTGGGTAGGTGGGAGTCTG-GGGTCTTC-GGGCA-GAATTACCTCCTCTGCAGGCCCTTGTCCTTGGGCTCTGGCTCCACAGCCCCAGTAGGATGGTGGAAATCAGCCTCTCTCTGGTCTGGATGAAGACAGACAGAGTCTCAGCCCTGGGAACATTAGAA-CCACCCATCCTGCACATGCAACTTGAGGGAAAGCAG i calJac3.chr22 T 35775 C 0 s mm10.chr7 3714027 326 + 145441459 CCCTCTCCAACA---CCCCGGTAATTCTGAAGCCCCAG-----CCATCT------------------------------------------------------------------------------------------CCCC------CCCCCAGGA-------------------------------CTCCCTTTCTCTCACATAGGCTTTCTTCCTGGGTGGCAGCAGCTGGGTTGGGCCTGG---AGGGACAAGGAGACGT--CACTTAGCAGTGAGATGTGTCAT--ACGGGCAGGGGTCTA--GGTCTCT-GT----GATTTACCTCTTCTGGAGTTCTCCTTTCCTGGTTATGGGCTCTTCAGCTCCTGAAGAAAGTTGCAAGTCTTTCTCTTTCTGGACTG--CAAGGGAGG--GGAGTCTCAG--CTAGGAGGATGGGAAGCC-CCTCCCCTGGGCATG----TTCAGGGAAGGAAG i mm10.chr7 I 14 C 0 s canFam3.chr1 19702444 290 - 122678785 CCCTTACC----------------------------------CCAAACC------------------------------------------------------------------------------------------TTCCAGCCCACCCCCAAGG---CA--------------------------GCCCCTTCCTCTCACAGAGGGTTTCCTCCTGGGTGGTAGCAGCTGGGCTGGAGCTGGGGAGGAGACATGG---TGT--CA-GAGGGCATG-CAGGGGGTG--GGTGGGTGGGAGTCTGGGGGTCTGT-GGGCAGGAGTTACCTGTCCTGCAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCAGGACATTAGGAATCAGCATCCCTCTGGAATGGG-----------------------------AGGTTACAA-CC-TCCTGCCTCCATGTGATACC--AGGGAAAGGAG i canFam3.chr1 C 0 I 125 e papAnu2.chr19 47186501 779 + 51301725 M a score=12452.000000 s hg38.chr19_GL949753v2_alt 193899 4 + 796479 GAAA s panTro4.chr19 59125679 4 + 63644993 GAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004130 4 + 60714840 GAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775328 4 - 106955855 GAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062682 4 + 64156825 GAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086125 4 + 59248254 GAAA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890218 4 + 50890351 GAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477239 4 + 49145316 GAAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3714353 4 + 145441459 GAAG i mm10.chr7 C 0 I 21 e canFam3.chr1 19702734 125 - 122678785 I e papAnu2.chr19 47186501 779 + 51301725 M a score=83568.000000 s hg38.chr19_GL949753v2_alt 193903 41 + 796479 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTTATGA s panTro4.chr19 59125683 39 + 63644993 ACTAAAAATATTCCTGCATGGATGTTCCAAATATTTCAT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004134 39 + 60714840 ACTAAAAATATTCCTGCATGGATGTTCCAAATATCTCAT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775332 41 - 106955855 ACTAAAAATATTCCTGCCTAGATGTTCCAAATATTTCATGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062686 41 + 64156825 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086129 41 + 59248254 ACTAAAAATATTCCTGCATAGATGTTTCAAATATTTTATGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890222 41 + 50890351 ACCAAAAATATTCCTGCATCGATGTTTCAAATATTTTATGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477243 41 + 49145316 GCTTAAAATATTCCTGCAGGGATGTCCCAGATATTTCATGA i calJac3.chr22 C 0 C 0 e mm10.chr7 3714357 21 + 145441459 I e canFam3.chr1 19702734 125 - 122678785 I e papAnu2.chr19 47186501 779 + 51301725 M a score=52155.000000 s hg38.chr19_GL949753v2_alt 193944 33 + 796479 GATAGAAAAAAACTCCCATGAATACTGAAGTTT-- s panTro4.chr19 59125722 33 + 63644993 GATAGAAAAAAAACTCCATGAATACTGACGTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004173 32 + 60714840 GATAGAAGAAAA-CTCCACGAATACTGACGTTT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775373 32 - 106955855 CATAGAAAAAAA-CTGCATGAATACTGGAGTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062727 31 + 64156825 GATAG-AAAAAA-CTCCATGAATACTGAAGTTT-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086170 31 + 59248254 GATAG-AAAAAA-CTCCATGAATACTGAAGTTT-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890263 32 + 50890351 TATAGAAAAAAA-CTCCATGAATACTGAAGTTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477284 33 + 49145316 GATAGAAAACAACTTCCATGAATACGGAGGTTT-- i calJac3.chr22 C 0 I 322 s mm10.chr7 3714378 34 + 145441459 GAGTGAGGAAAT-GTCCCAGAACATGGTAATGTTC i mm10.chr7 I 21 C 0 e canFam3.chr1 19702734 125 - 122678785 I e papAnu2.chr19 47186501 779 + 51301725 M a score=55190.000000 s hg38.chr19_GL949753v2_alt 193977 28 + 796479 GTAAATGCGTATTGAAATTACGT-GCCCC s panTro4.chr19 59125755 28 + 63644993 GTAAATGCGTGCTGACATTACAT-GCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004205 28 + 60714840 GTAAATGTGTGCCGACATTACGT-GGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775405 28 - 106955855 GTAAATGCGTGCTGACATTACGT-GCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062758 28 + 64156825 GTAAATGTGTGCTGACATTACGT-TTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086201 28 + 59248254 GTAAATGTGTGCTGACATTACGT-TTCCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890295 28 + 50890351 GTAAATGCGTGCTGACATTACGT-TTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477639 28 + 49145316 GTAAATGTGTGCTGACATTAGAC-GCCTC i calJac3.chr22 I 322 C 0 s mm10.chr7 3714412 19 + 145441459 ----------ACAGGCATTGCATAGATTC i mm10.chr7 C 0 C 0 e canFam3.chr1 19702734 125 - 122678785 I e papAnu2.chr19 47186501 779 + 51301725 M a score=169138.000000 s hg38.chr19_GL949753v2_alt 194005 79 + 796479 TGGAACCGGTT---TTCTAAACTGACACC-CCTGTGTGTTTGGG----------------------TTCCCTCTGGCTGGTGCCCTGAGCCCACCCTCGGTCGAC s panTro4.chr19 59125783 79 + 63644993 TGGAACCGGTT---TTCTAAACTGACACC-CCTGTGTGTTTGGG----------------------TTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGGTCGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004233 75 + 60714840 TGGAACCGGTT---TTCTAAACTGACACC-CTTGTATGTTTGGG----------------------TTCCCTCTGGCTGGCGCCCTGAGCCCACCCTTGG----C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775433 77 - 106955855 TGGAACCAGTT---TTCTAAACTGACACC---TGTGTGTTTCGG----------------------TTCCCTCTGGCTGGTGCTCTGAGCCCACCCTCGGTCGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062786 70 + 64156825 TGGAACCGGTT---TTCTAAACTGACACC-CCGGTGAGTTTGGG----------------------TTCCCTCTGGCTGGTG---------CACCCTCCGTCGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086229 70 + 59248254 TGGAACTGGTT---TTCTAAACTGACACC-CCGGTGAGTTTGGG----------------------TTCCCTCTGGCTGGTG---------CACCCTCCGTCGGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46890323 70 + 50890351 TGGAACTGGTT---TTCTAAACTGACATC-CCTGTGTGTTTGGG----------------------TTCCCTCTGGCTGGTA---------CACCCTCCGTCGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477667 79 + 49145316 TGGAACCGGTT---TTCTAAGCTGACTTC-CCTGTGTGTTCTGG----------------------CTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGGCCAGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3714431 103 + 145441459 TGAGACCAATTGCCTTCTGATCTGTGATC-TGCACGTTTCTAAGCTACCCTGCCCCAGGTTGAGCTTTCCCTATGGCTGGTG-TCTGAGCGCCTGCTTCGATGTT i mm10.chr7 C 0 I 19 s canFam3.chr1 19702859 77 - 122678785 TGGAA---GTG---TCCTACATCGGCCTTTCCCACCTCTCTGGG----------------------TTCCCTCTGGCTGCTGCCCTGAGCCCACCCTGGGTCAGC i canFam3.chr1 I 125 C 0 e papAnu2.chr19 47186501 779 + 51301725 M a score=960972.000000 s hg38.chr19_GL949753v2_alt 194084 290 + 796479 -----------------CCATGGGTCCCCCGC------TTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggaggaggaa---gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGAG-GACGTCAGGAGTGG-G--AATGAtgtcattgatgtgagcacctactgtgtg-caggcgcgagccagg-tcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattg-----ccacccgtacaacccatttc s panTro4.chr19 59125862 290 + 63644993 -----------------CCATGGGTCCCCCGC------TTCCCTACTCACCAGATGTCCTGTGTTTGCTGTGACGCTGACGTCggaggaggaggaa---gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CATGAG-GACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccggg-tcttt-ccttcgtgacctccaaccctcacaagcagtcgtgcaacatggaattg-----ccacccgtacaacccatttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004308 289 + 60714840 -----------------CCATGGGTCCCCTGC------TTCGCTACTCACCCGATGTCCTGCGTTTGCTCTGACGCTGACGTCggaggaggaggaa---gaggaggaggaggagcagcaggaCGAAGGCCACCGATACCCCAATCAAAATCTCCAGGTATCTTCCCAGACCTTGA-CATGAT-GACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgctggg-tcttt-ccttcatgagctccaaccctcacaagcagtcgtgcaacatggaattg-----ccgccc-cacaacccatttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102775510 287 - 106955855 -----------------CCATGGGTCCCCCGC------TTCCCTACTCACCAGATGTCCTGTGTTTGCTCTGACGCGGACGTCggaggaggaggaa---gaggaggaggaagagcagcaggacgaAGGCCACCGAGACCCCAATCAAAACCTCCAGGTATCTTCCCAGACCTTGA-CAT----GACGTCAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgagccagg-tcttt-ccttcatgacctccagccctcacaagcagtcgtgcaacatggaattg-----ccgcccccacaacccatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60062856 288 + 64156825 -----------------CCATGGGTCCCACAA------TTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGCTGACGTCggaggacgaggaa---gaggaggaggaagagcagcaggaCGAAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTTCCCAGACCTTGAGCAT----GATAACAGGAGTGG-G--AATGACGTCACTGATGtgagcacctactgtgtg-caggtgcgtgccagg-tcttt-ccttcaagacctacaacccttacaagcagttgtgcaacatggaattg-----ccgcccccacaacccatttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55086299 288 + 59248254 -----------------CCATGGGTCCCACAA------TTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGCTGACGTCggaggacgaggaa---gaggaggaggaaaagcagcaggacgaAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTTCCCAGACCTTGAGCAT----GATAACAGGAGTGG-G--AATGACGTCATTGACGTGAGCACCTACTGTGTG-CAGGTGCGTGCCAGG-TCTTT-CCTTCAAGACCTCCAACCCTTACAAGCAGTTGTGCAACATGGAATTG-----CCGCCCCCACAACCCATTTC i macFas5.chr19 C 0 M 8301 s papAnu2.chr19 47187280 288 + 51301725 -----------------CCATGGGGTCCCCAC------TTCCCTACTCACCCGATATCTTGTGTTTGCTCTGACGTTGACGTCGGAGgacgaggaa---gaggaggaggaagagcagcagGATGAAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTCCCCAGACCTTGAGCAT----GATAACAGGAGTGG-G--AATGACGTCATTGAtgtgagcacctactctgtg-cagGTGCGTGCCAGG-TCTTT-CCTTCAAGACCTCCAACCCTTACAAGCAGTTGTGCAACATGGAATTG-----CCGCCCCCAcaacccatttc i papAnu2.chr19 M 779 C 0 s chlSab2.chr6 46890393 288 + 50890351 -----------------CCATGGGGTCCCCAC------TTCCCTGCTCACCCGATATCTTGTGTTTGCTCTGACGTTGACGTCggaggacgaggaa---gaggaggaggaagagcagcaggatgaAGGCCACCGAGACCCCAATCAAAGCCTCCAGGTATCTCCCCAGACCTTGAGCAT----GATAACAGGAGTGG-G--AATGACGTcattgatgtgagcacctactgtgtg-caggcgcgtgccagg-tcttt-ccttcaagacctccaacccttacaagcagttgtgcaacatggaattg-----ccgcccccacaacccatttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45477746 289 + 49145316 -----------------CCATGGGTACCCCCC------TTCCCTACTCACCCAAGGTTCTGTGTTTCTTCTGACGCCGGTGTCggaggaggaggaagaggaggaggaggaggagcagcaggaTGAAGCCCATGGAGACCCCAGTCAACACCTCCAGGTACCTTCCCAGACCTTGAGTGTGAT-GACGTCAGGAATGA-G--GATGAtgtcattgatgtgagcacctactgtgcg-caggcgtgtgccaag-----t-cattcatgagctctaaccctcac-agcactcatgcaacatgggattg-----ctgcccccacaacccatttc i calJac3.chr22 C 0 C 0 s mm10.chr7 3714553 299 + 145441459 -----------------TCCTGAGACCCAAGTTACACATACCCTCCTCACCATCTTTCCTGAATTTTCCCCGATGTCTTCGTCGAAGAAGAATGAA---GATGAAGATGAAGAGGAACAGGATGAAGGCCACAGACACTCCAATGAGAGCCTTCAGGTACATATGCAGTCCTGAGGCACAAGTGACATCATTAGTGGAG--ACCTTTGCTGCTTACctgagcacctactgtgtgacaggctcatgctggg-tctctgcacacaTCATCCCCCATCTTTACAA----TCATGTACCATGGAATTGTGTCTTTTcctgtccagccagt--- i mm10.chr7 I 19 C 0 s canFam3.chr1 19702936 310 - 122678785 CCACAGAGCACCACCACCCCTGGGGTGCCTCA------GCCCCTTCTTACTTGACTTCCTGCATTTGCCCCGACGTTGCTGTCGGACCAGGAAGAG---GATGAGGAGGCAGAGCATCAGGATGAAGGCCACCGAGGACCCGATGAGGACGTACAGGTACCAGCTAGGACCTTGGGCAGGAGCTATACCATGAATGA-GCCAGTGATTCCATtttactgagcacctactgtgtgccaggcacctgctgggctctgt-gctt--gcacctgtgactctgacaa-tgatcatgcagcaggggattg-----ctgtccctcccacctgctcc i canFam3.chr1 C 0 C 0 a score=104120.000000 s hg38.chr19_GL949753v2_alt 194374 43 + 796479 acagatgcacaaactgaggctcagagcagggagtcgcctgccc s panTro4.chr19 59126152 43 + 63644993 acagatgcacaaactgaggctcagagaggggaatcgcctgccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004597 43 + 60714840 acagatgcacaaactgaggctcagagcgggtagtcgcctgccc i ponAbe2.chr19 C 0 I 323 s nomLeu3.chr10 102775797 43 - 106955855 acagatgcacaaactgaggctcagagcggggaatcgcctgccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063144 43 + 64156825 acagatgcacaaactgaggctcagagaagtgaaccgcctgtca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47187568 43 + 51301725 acagatgcacaaactgaggctcagagaggggaatcGCCTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890681 43 + 50890351 atagatgcacaaactgaggctcagagaggggaatcgcctgccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478035 41 + 49145316 acagatacataaactgaggctcagag--ggcaatcgcctgccc i calJac3.chr22 C 0 C 0 s mm10.chr7 3714852 10 + 145441459 ---------------------------------tcacctgact i mm10.chr7 C 0 C 0 s canFam3.chr1 19703246 42 - 122678785 acagac-tgtaaactgaggcacagaggggtcaatcacgtgtcc i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 8301 + 59248254 M a score=8576.000000 s hg38.chr19_GL949753v2_alt 194417 4 + 796479 cagg s panTro4.chr19 59126195 4 + 63644993 cggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775840 4 - 106955855 cggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063187 4 + 64156825 caga i rheMac3.chr19 C 0 I 41 s papAnu2.chr19 47187611 4 + 51301725 CAGG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46890724 4 + 50890351 cagg i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45478076 4 + 49145316 cagg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703288 4 - 122678785 cagg i canFam3.chr1 C 0 C 0 e mm10.chr7 3714862 0 + 145441459 C e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 8301 + 59248254 M a score=44728.000000 s hg38.chr19_GL949753v2_alt 194421 30 + 796479 -cctccagcgaggaagcggcagagctgggaa s panTro4.chr19 59126199 30 + 63644993 -cccccagcaaggaagcagcagagctgggaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775844 30 - 106955855 -cccccagccaggaagcggcagagctgggaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47187616 30 + 51301725 -CCCCCAGCCAGGAAGCGGCAGAGCTGGGAA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46890729 30 + 50890351 -cccccagccaggaagtggcagagctgggaa i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45478080 30 + 49145316 -tccccagccaggtggtggcagagctgggga i calJac3.chr22 C 0 C 0 s mm10.chr7 3714862 15 + 145441459 -----------ggaagtggcagagtt----- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703292 31 - 122678785 tcgtccagtgtggaggtggcagggctgggac i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60063191 41 + 64156825 I a score=222561.000000 s hg38.chr19_GL949753v2_alt 194451 136 + 796479 gggagcccgggag---------------tctgacc-tgcagcccttgt----t-cctgcaccaGAG--CCGAGACCCG-GAGCTGCAGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG s panTro4.chr19 59126229 136 + 63644993 gggagctcgggag---------------tctgacc-tgcagcccttgt----t-cctgcaccaGAG--CCAAGACCCG-GAGCTGCAGGGAAAGAGCCTGACC----------ATCCTGAACCA---------------------------------CAGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102775874 136 - 106955855 gggagcccgggag---------------tctgacc-tgcagcccttgt----t-ccttcACCAGAG--CTGAGCCCCG-GAGCTGCAGGGAAAGAGCCTGACC----------TTACTGAATCA---------------------------------CTGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCTCTGCTGCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063232 137 + 64156825 gagaaccgggaag---------------tctgacc-cgcagcccttgt----tccctgcaccgGAG--CTGAGCCCCA-GAGATGCAGGGAAAGAACCTGACC----------GTCCTGAACCA---------------------------------CAGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACCGCTGCAG i rheMac3.chr19 I 41 C 0 s papAnu2.chr19 47187646 137 + 51301725 GGGAACCCGGGAG---------------TCTGACC-CGCAGCCCTTGT----TCCCTGCACCAGAG--CTGAGCCCCA-GAGATGCAGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------Cagccctgctcccctcccctgcccc----aggtCACCGTCACTGCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890759 127 + 50890351 gggaacctgggag---------------tctgacc-cgcagcccttgt----tcccagcaccaGAG--CTGAGCCCT-----------GGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCGCTGCTCCCCTCCCCTGCCCC----AGGTCACCGTCACTGCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478110 135 + 49145316 gggaacccaggag---------------tctgacc-tgcagcccttgt----tccctgtact-gAG--CTGAGCCCCG-GAGCTGCAGGGAAAGAGCCTGACC-----------TCCTGAACCA---------------------------------CGGCCCTGCTCCCCTCCCCTGCCCC----AGGTCAGCGTCACTGCTGCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3714877 122 + 145441459 --gaacccagaat--------------ctctgact-tccagccc-tgc----tctctgcaccaGAG--CTGAGAGCAATGAGTTG---GAGAGGAGTGTGAAT----------GTCGTG--CTA---------------------------------TGGCTGTGTATCCCACCCTTACTC-----------ATGTCGCTACAGC-- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703323 203 - 122678785 aggaagttgggatgaaggttccctgtgctctACTCATGCCTCCCCTGTGAGGTCACCACTCCGAGGCTCTGGGCTCCT-CATTTG---GGGCAGGATCTGTCCCAGCATCTTCATCCTGAGCTGAGGGTCCTTCCAGACCTCAACACCCCCAGCCATCAACTTCCCTCTCCTCCCCTCCTCCTACAATATCACTGTCATTGCTGCAG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56004640 323 + 60714840 I e macFas5.chr19 55086587 8301 + 59248254 M a score=251348.000000 s hg38.chr19_GL949753v2_alt 194587 107 + 796479 GTGGGACGGGACAGGCCCCTGT---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGGgtcagagctgaaaggaactttcccac s panTro4.chr19 59126365 107 + 63644993 GTGGGACAGGACAGGCACCTGC---GGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGGCACAGCTGGGGgtcagacctgaaaggaactttcccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56004963 105 + 60714840 GTGGGACAGGACAGGC-CCTGC---AGAATCA-GGTTTGGGAGG-TTCCCT-GGAAGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggagctttcccac i ponAbe2.chr19 I 323 C 0 s nomLeu3.chr10 102776010 107 - 106955855 GTGGGACAGGACAGGCCCCTGC---GGAGTCA-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagaactgaaaggaactttcccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063369 107 + 64156825 GTGGGACAGGACAGGCCCCTGT---GGAATCG-ACTCTGGGAGCCTTCCCT-GGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47187783 95 + 51301725 GTGGGACAGGACAGGCCCCTGT---GGAATCG-GGTCTGGGAGGCTTCCCTGGGAGTTCTCCTCTCCCAG--GAGGTCAC-------------AGCTGCAAGGAACGTTCCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890886 108 + 50890351 GTGGGACAGGACAGGCCCCTGC---GGAATCG-GGTCTGGGAGGCTTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478245 107 + 49145316 GTGGGACAGGATAGGCCCCTGT---GGAATCG-GGTCTGGAGGC-TTCCCTGGGAGGCCTCCTCCCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccac i calJac3.chr22 C 0 C 0 s mm10.chr7 3714999 91 + 145441459 GTGGCTCTGGGC-----CCTGC---AGAATCA-GA----------TTCT---GGAGGCCTTTTCTGTCAGGAGAGGTCACCACCAAG-GCCAGCACAGaaacaaacaaacaaac i mm10.chr7 C 0 I 126 s canFam3.chr1 19703526 103 - 122678785 ------AGGGACAGACACCTTCCCTAGAATCATGATTTGGGTAACTTCCCCATGAGCCCTCCTCTCCCag--gaggtcagagccatg-gtcagaacc--aaggacaaatctaat i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 8301 + 59248254 M a score=287091.000000 s hg38.chr19_GL949753v2_alt 194694 111 + 796479 cca---ca-ggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccacatcaccacctccagaggagcctgaacctaggacagaacccacccctg s panTro4.chr19 59126472 111 + 63644993 ccg---ca-ggcctctctcctttacacttggagaaactgagtcccatgcaggggaggggcctgtccacatcgccacctccagaggagcctgaacctaggacagaacccacccctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005068 110 + 60714840 ccg---ca-ggcctctctcctttacacttggagaaactgaggcccaggcagggga-gggcccgtccacatcgccacctccagaggagcctgaacctaggacagaacccactccta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776117 111 - 106955855 ccg---ca-ggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccaCATCGCCACCTCCAGAGGAGCCGGAACCTAGGACAGAACTGACCCCCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063476 111 + 64156825 ccg---ca-ggcttctttcctttacacctggagaaactgaggcccaggcagcggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacctctg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47187878 111 + 51301725 CCG---CA-GGCTTCTTTCCTTTACacctggagaaactgaggcccaggcaggggaggggcctgTCCACGTCACCATCTCCAGAGGAGCCTGAACCTAGGACAGAAccgacctctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46890994 111 + 50890351 ccg---ca-ggcttctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccacgtcaccatctccagaggggcctgaacctaggacagaagccacccctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478352 107 + 49145316 tag---tgcagtttctctctc-----cttggagaaactgaggcccaggtgggagaggggcctgtccctgtcaccatctccagaggaacctgaacctaggacagaacccacccctg i calJac3.chr22 C 0 C 0 s mm10.chr7 3715216 107 + 145441459 GGG---CA-GGTTTCT---CTTTATACTCAGAGGAACAGCAGCCTA-GCAAGAGAAGGACTTGACCAAGTCAAGCTATCTAGAGGCAGCTGTATCAAGACTCTAACTAGCTATTG i mm10.chr7 I 126 C 0 s canFam3.chr1 19703629 114 - 122678785 ctgggcca-tgactctctcttttacacttggggaaactgaggcccacacatgggaggggcatgtccaagacagggaatgtagagggtcatgaagtgagggtgtaaatcagccctg i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 8301 + 59248254 M a score=-880.000000 s hg38.chr19_GL949753v2_alt 194805 1 + 796479 -c s panTro4.chr19 59126583 1 + 63644993 -c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005178 1 + 60714840 -c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776228 1 - 106955855 -C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063587 1 + 64156825 -c i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47187989 1 + 51301725 -c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891105 1 + 50890351 -c i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478459 1 + 49145316 -c i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703743 1 - 122678785 a- i canFam3.chr1 C 0 C 0 e mm10.chr7 3715323 0 + 145441459 C e macFas5.chr19 55086587 8301 + 59248254 M a score=265424.000000 s hg38.chr19_GL949753v2_alt 194806 127 + 796479 ctcccCTGGACCCCGCCCATCTCCCACT--CAGAGCCCCTCACTCACGATTCT--GAGGGCCTGACCCTGGGGGGTTAAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGGTGAAGGCTGGGG s panTro4.chr19 59126584 127 + 63644993 ctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCGCCACTCT--GGGGGCCTGACCCTGGGGGGTTGAGGGGCTGGTCCTCAGGACCTCCT-GGGTCAGGACAGGG--AGATGAGGGCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005179 126 + 60714840 ctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCT--GAGGGCCTGACCCTGCGGGGTTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGACAGGT--AGGTGAGGGCTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776229 126 - 106955855 CTCCCCAGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCT--GGGGGCCTGACCCTGAGGGGCTGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGGATGGGG--AGGTGAGGGCTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063588 126 + 64156825 ctcccCAGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCT--GGGGGTCCGACCCCGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGCGG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47187990 126 + 51301725 ctccccaggaccCCACCCACCTTCCTCT--CAGAGCCGT-CACTCACCACTCT--GGGGGCCTGACTCTGAGGGGTTGAGGGGATGGTCCTCAAGGCCTCCT-GGGTCAGGACAGGG--AGGTGAGGGCTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891106 126 + 50890351 ctcccCGGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCT--GGAGGCCTGACCCTGAGGAGTTGAGGGGCTGGTCCTCAAGGCCTTCT-GGGTCAGGACAGAG--AGGTGAGGGCTGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478460 121 + 49145316 ctttcctgga-cctgcccacct---gct--cagacaccctCACTCACTACTCT--GGGGGCCTGAC-CTGAGGGG-TGAGGGGCTGGTCCTCAGGGCCTCCT-GGGTCAGCACAGGG--AGCTGAGGGCTGGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715323 116 + 145441459 TTCATCTGA-----GCACATATTTTAAC--AAA-----C-TGTTTATTAGTCTTCTGAGGCCTGACTCCATGCAGGTGACAGG--GGCCATGCCGAGCTTTA-GGGGTAAGATAGGG--AACTGAGTGTTTGTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19703744 91 - 122678785 -tccccaTGA-CCCACCCACCACCTCCTGACAGAGACCCTCACTTAC-----------------------------------------CCTCAGAGACTCCTGGGGTCAGTAGAGGGTCAGGGGAGGGCCTGTG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 8301 + 59248254 M a score=2640.000000 s hg38.chr19_GL949753v2_alt 194933 1 + 796479 ----C s panTro4.chr19 59126711 1 + 63644993 ----C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005305 1 + 60714840 ----C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776355 1 - 106955855 ----C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063714 1 + 64156825 ----C i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47188116 1 + 51301725 ----C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891232 1 + 50890351 ----C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478581 1 + 49145316 ----C i calJac3.chr22 C 0 C 0 s mm10.chr7 3715439 5 + 145441459 TTCCC i mm10.chr7 C 0 C 0 e canFam3.chr1 19703835 0 - 122678785 C e macFas5.chr19 55086587 8301 + 59248254 M a score=64711.000000 s hg38.chr19_GL949753v2_alt 194934 33 + 796479 TGTCTT--GCCCCCCACATCAGCCCGGCTCCTCCT s panTro4.chr19 59126712 33 + 63644993 TGTCTT--GCCCCCCACATCAGCCCGGCTCCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005306 32 + 60714840 TGCCTT--GCCCCCCACATCAGCCTGGCTCC-CCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776356 33 - 106955855 TGCCTT--GCCCTCCACGTTAGCCGGGCTCCTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063715 33 + 64156825 TGCCCT--GCTCCCCACGTCAGCCCGGCTGCTCCT i rheMac3.chr19 C 0 I 3 s papAnu2.chr19 47188117 33 + 51301725 TGCCCT--GCCCCCCATATCAGCCTGGCTCCTCCT i papAnu2.chr19 C 0 I 61103 s chlSab2.chr6 46891233 33 + 50890351 TGCCCT--GCCCCCCATATCAGCCTGGCTCCTCCT i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45478582 33 + 49145316 TGCCTT--GTCCCCCACATCAGCCCAGCTGCTCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715444 30 + 145441459 TGCTTTCAACTTCCCACAACTGCCCCACCC----- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703835 27 - 122678785 TGCTTC-----CACTGCACCTGCT--GCCCCTCC- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55086587 8301 + 59248254 M a score=4962.000000 s hg38.chr19_GL949753v2_alt 194967 3 + 796479 CCT s panTro4.chr19 59126745 3 + 63644993 CCC i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56005338 3 + 60714840 CCC i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 102776389 3 - 106955855 CCC i nomLeu3.chr10 C 0 I 10499 s rheMac3.chr19 60063751 2 + 64156825 -CC i rheMac3.chr19 I 3 I 1 s chlSab2.chr6 46891270 2 + 50890351 -CA i chlSab2.chr6 I 4 I 1 s calJac3.chr22 45478615 2 + 49145316 -CC i calJac3.chr22 C 0 I 1 s mm10.chr7 3715474 2 + 145441459 -CC i mm10.chr7 C 0 I 1 s canFam3.chr1 19703862 3 - 122678785 CCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47188150 61103 + 51301725 I e macFas5.chr19 55086587 8301 + 59248254 M a score=98644.000000 s hg38.chr19_GL949753v2_alt 194970 71 + 796479 GGCTGGGCCCCAACATCTCCCTCTGCCTCG-ACCCCCCACTCTTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA s panTro4.chr19 59126751 71 + 63644993 GGCTGGGCCCCAACATTTCCCTCTGCCTCA-ACCCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56005344 71 + 60714840 GGCTGGGCCCCAACATCTCCCTCTGCCTCG-AACCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i ponAbe2.chr19 I 3 C 0 s rheMac3.chr19 60063754 72 + 64156825 GGCTGGGCCCCAACACCTCCCTCTGCCTCGCGCCCCCCGCCCCTCACCGGCCCAGCCTCGGAGCCCC------------------TGGGA i rheMac3.chr19 I 1 I 81543 s chlSab2.chr6 46891273 72 + 50890351 AGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCCCACTCCTCAGCAGCCCAGCCTCAGAGTCCC------------------TGGGA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45478618 71 + 49145316 TGCTGGGCCCCAATATCTGCCTTTGCCTTG-ACCCCCCACCCCTTACCAGCCCAGCCTCAGAGCCCC------------------TGGGA i calJac3.chr22 I 1 C 0 s mm10.chr7 3715477 81 + 145441459 TGATGAGCCTAAATACTTCTCTCTGAATCT---------CCCTGCTGTAGCCCAACCTCTGAGCCCCAGCTTCAGTGGTCTCTGGTGAGA i mm10.chr7 I 1 I 21 s canFam3.chr1 19703865 67 - 122678785 AGATGGGTCCCCACCCCTCCCTATCCCATG-AACACCCAGCCTCCTCCA--CCAGC--CGAGACCCC------------------TGGTG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 47188150 61103 + 51301725 I e macFas5.chr19 55086587 8301 + 59248254 M a score=1806.000000 s hg38.chr19_GL949753v2_alt 195041 20 + 796479 --CACAAGCC--CGT---------------------------CCTTGAGGG s panTro4.chr19 59126822 20 + 63644993 --CACAAGCC--CGT---------------------------CCTTGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005415 20 + 60714840 --CACAAGCC--CGT---------------------------CCTTGAGGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249253 42 + 51301725 -------GCC--TGTGGCCCCTCCTCTGGCTCTGCCCAGCTCCCAAGATGG i papAnu2.chr19 I 61103 I 20 s chlSab2.chr6 46891345 20 + 50890351 --CACAAGCC--TGT---------------------------CCTAGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478689 20 + 49145316 --CACAAGCC--CAT---------------------------CCTTGAGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715579 13 + 145441459 --TACAAGCTGAAGT------------------------------------ i mm10.chr7 I 21 I 2 s canFam3.chr1 19703932 18 - 122678785 CCCATCGGCC--CCC---------------------------TTTCA---- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60063826 81543 + 64156825 I a score=51392.000000 s hg38.chr19_GL949753v2_alt 195061 47 + 796479 GAGGGGAGTGGGATCCTTTGGGAGACT-CA-GACTG----C-------CCTGGGGGAGGC s panTro4.chr19 59126842 47 + 63644993 GAGGGGAGTGGGATCCTTAGGGAGACT-CA-GACTG----C-------CCTGGGGGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005435 47 + 60714840 GAGGGGAATGGGATCCTTAGGGAGACT-CA-GACTG----C-------CCTGGGGGAGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60145369 48 + 64156825 GAGGGGAATGGGATCCTCTGGGAGACTCAG-GACTG----C-------CCTGCGGGAGGC i rheMac3.chr19 I 81543 I 19 s papAnu2.chr19 47249315 35 + 51301725 GAGGGGAATGGGA--CTCTGGGAAATG-----------------------TGTGGGAGGC i papAnu2.chr19 I 20 I 2 s chlSab2.chr6 46891365 47 + 50890351 GAGGGGAATGGGGTCCTTCGGGAGACT-CA-GACTG----C-------CCTGGGGGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478709 48 + 49145316 GAGGGGAATGGGATCTTTTGGGAGACT-CAGGACTG----C-------CCTGGGGGAGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715594 54 + 145441459 GATAGAAATGAGGACTGTGGTGGGCCA-AG-AGCTG----CCAGGCAGCCTGGGGTGGGA i mm10.chr7 I 2 I 1 s canFam3.chr1 19703950 33 - 122678785 --------------TCTCTGAGAGACT-GG-AACCAAAGCC-------CCTGGACG---- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M a score=10982.000000 s hg38.chr19_GL949753v2_alt 195108 12 + 796479 GGCGCTCCCCAC s panTro4.chr19 59126889 12 + 63644993 CGCGCTCCCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005482 12 + 60714840 CGCGCTCCCCAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249352 12 + 51301725 TGCTCCCTCTGA i papAnu2.chr19 I 2 I 5 s chlSab2.chr6 46891412 12 + 50890351 TGCGCTCCCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478757 12 + 49145316 CGTGCTCCCCAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715649 12 + 145441459 AATACTCCCTGC i mm10.chr7 I 1 I 3 e canFam3.chr1 19703983 0 - 122678785 C e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60145417 19 + 64156825 I a score=97667.000000 s hg38.chr19_GL949753v2_alt 195120 54 + 796479 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGGCTGG s panTro4.chr19 59126901 54 + 63644993 GAGGCCTCAGTGACTCACCAGGTGTGGAGGGCGGCCCTGTGGGTGGGAGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005494 54 + 60714840 GAGGCCTCAGTGACTCACCAGATGTGGAGGGCGGCCCTGTGGGTTGGGGGCTGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60145436 54 + 64156825 GAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTGGGTTGGGGGCTGG i rheMac3.chr19 I 19 I 168 s papAnu2.chr19 47249369 54 + 51301725 GAGGCCTGAGAGACTCACCAGGTGTGGGGGTGGGACCAGTGAGTGGGGGGCTGG i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 46891424 54 + 50890351 GAGGCCTCAGTGACTCACCAGGTGTGGAGCGTGGCCCTGTGGGTGGGGGGCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478769 51 + 49145316 GAGGCCTCCATGACTCACCAGGTGTGG---TTGGCCCTGCGGGTGGTGGGCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715664 53 + 145441459 GAGTACCTGAT-ACTTACCACCTAGTGGCATGGACATTGTGGGTGGCGGGGTAG i mm10.chr7 I 3 C 0 s canFam3.chr1 19703983 54 - 122678785 GACGCCCCTGTAACTCACCAGCTGTTGGGCTGGATATTGTGGGTGGGGGACCAT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M a score=136471.000000 s hg38.chr19_GL949753v2_alt 195174 178 + 796479 AGCCTCCAGAGTGTCCT-GGA---AGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGCACCCTTCCACTCCCA---CTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCAT----CTCTCTGCCC---ACCTGGTGCCTTCTGCATGCCAGGCAGGGGAGAACGGGTGGCCACGCCTA s panTro4.chr19 59126955 178 + 63644993 AGCCTCCAGAGGGTCCT-GGA---AGGAGCACGGGAGGCGGGTGAGGGGCGGGGGCCGTCCATGGAGTGTACCCTTCCACTCCCA---CTCTCCTGCTTCCGCCCAGTGGATTCCCTGGAACCAT----TTCTCTGCCC---ACCTGGTGCCTTCTGCATGCCAGGCAGGGGAGAACGGGTGGCCATGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005548 178 + 60714840 AGCCTCCAGAGGGTCCT-GGA---AGGAGCACAGGAGGCGGGTGAGGGGCTGGGGCTGTCCATGGAGGGCACCCTTCCACTCCCA---CTCTCCTGCGTCTGCCCAGTGGATTCCCTGGAACCAT----TTCTCTGCCC---ACCTGGTACCTTCTGCATGCCAGGCAGGGCAGAACAGGTGGCCATGCCTA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249423 177 + 51301725 GACTCCCAGAGGGTCCT-GGGTTAAAGAATG--AGAGGAAGCTGAGGAGCGGGG--CTTCCTTGCAGTCCCCGCCTCAAACCAAA---TTTCTCTACACGGGCCATGTGGCCTCCTCAGGCCACT----CCCTCCACCC---ACCTCTCCTCTTCATGATGCTGGCGATGCCGCTGAGGGTGAGCATGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891478 176 + 50890351 AGCCTCCAGAGGGTCCT-GCG---AGGAGCAC-GGAGGCGGGTGAGGGACTGGGGCCGTCCATGGAGTGCACCCTTCCACTCCCA---CTCTCCTGCATCTGCCCAGTGGATCCCCAGGAACCAT----TTCTCTGCCC---ACCTGGTACCTTCTGCATGCCAGGCAAGGAGA-ACGGGTGGCCATGCCTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478820 174 + 49145316 AGCCTGCAGAGGGTCCT-GGA---AGGAGTACAGGAGGTGGGTGAGGGCCCGGG-CTGTCTGTGGAGCACACACTTC-ACTCCAG---CTTCCCTGCGTCCACACAGTGCATTCCCTGGAAACAT----TTCTCTGCCC---ACCTGGTACCTTCTGCATGCCAG-CAAGGCAT-ACGGGTGGCCATGCCTA i calJac3.chr22 C 0 C 0 s mm10.chr7 3715717 169 + 145441459 AGGTTTCGATGGGTCCTAGGA---AAGAGAACAAGAAGAGGACGAGGATTAGATGCAAGCCCAGGA-TCCTCACTTG---GTTCA---CTGTCCTCTATCTGCCCTGTAAACTCTGCAAGATACTGATAGTCGCTACTCCAAACCTAG----------ATTGCAG-TAGAGGAC--TGAGTGGACATTACTC i mm10.chr7 C 0 I 3 s canFam3.chr1 19704037 169 - 122678785 GGTGTCCAGAGGATCCT-GTGC--AAAAAGACAGGAG------CGGGGGCAGGAGCTTCCCTTAGAGACCCTGTCTATGCTCACACCCCTCCTCTTCATTTACCCTGAGG--TCCCCAGGTACTC----CTCCTCCTCC---ACGTGGAAAATTCTG-GTGACGGGGGCGAGGGAAGGGGCAGGAGTG---- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60145490 168 + 64156825 I a score=5182.000000 s hg38.chr19_GL949753v2_alt 195352 7 + 796479 GGAGAAC s panTro4.chr19 59127133 7 + 63644993 GGAGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005726 6 + 60714840 GGAGAA- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60145658 7 + 64156825 GGAGAAC i rheMac3.chr19 I 168 T 81777 s papAnu2.chr19 47249600 6 + 51301725 GGAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891654 7 + 50890351 GGAGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45478994 7 + 49145316 CGAGAAC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715889 4 + 145441459 GGAG--- i mm10.chr7 I 3 C 0 s canFam3.chr1 19704206 6 - 122678785 GGAGGG- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M a score=41042.000000 s hg38.chr19_GL949753v2_alt 195359 95 + 796479 CCCTGTTGGCCTCCTCCCCTCTG--AGGGCTGGGT-GCCCTCTGGCTAAGCCTC------------CCTCAC--AGCCTCCCTCGGTCCATCCCAGCCGAGAGCTCTCCTGG-- s panTro4.chr19 59127140 80 + 63644993 CCCTGTTGGCCTCCTCCCCTCTG--AGGGCTGGGT-GCCCTCTGGCTAAGCCTC------------TCTCAC--------------TCCATCCCAGCTGAGA--TCTCCT-G-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005732 81 + 60714840 CCCTGTTGGCC-CCTCCCCTCTG--AGGGGTGGGT-CCCATCTGGCTAAGCCTC------------CCTCAC--------------TCCATCCCAGCCGAGAGCTCTGCT-C-- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249606 92 + 51301725 CCCTGTTGTCCTCCTCCCCTCTG--AGG--TGAGTGCCCTTCTGGCTAAGCCCCGCTTAGATCCCTGCTCAC--------------TCCATCCCAGCCCAGAGCTCTCCT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891661 78 + 50890351 CCCTGTTGGCCT-CTCCCCTCTG--AGGGCTGCGT-CCCCTCTGGCTAAGCCTC------------CCTCAC--------------TCCCTCCCAGCT--GAGATCTCTG---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479001 85 + 49145316 CCCTGCTGGCTTCCT-CCTGCTG--AGGACTGAGG-CCCTTCGGGCTAAACCTC------------CCTCAT--AACCTCCCTCCCTCCATCCTCCCT------CCTCA----- i calJac3.chr22 C 0 I 64110 s mm10.chr7 3715893 96 + 145441459 CACTGCTAGCATTAATTCCTCTGCCAGGG-AAACT-GTCTTCTGACAAAGCCAT------------CTTCCTTTTGTCTCCTTAATCCCAACCCAGTAAACAGCTCTGCT---- i mm10.chr7 C 0 I 2 s canFam3.chr1 19704212 62 - 122678785 ----------------CAGTGTG--AAGGGTGGAC-TCCCTCAG----AGCCCC------------TCTC-T--------------TCCATCCCAGCCCCGTGCTCTTGT--GG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60145665 81777 + 64156825 T a score=1500.000000 s hg38.chr19_GL949753v2_alt 195454 1 + 796479 G s panTro4.chr19 59127220 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005813 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249698 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891739 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19704274 1 - 122678785 G i canFam3.chr1 C 0 C 0 e mm10.chr7 3715989 2 + 145441459 I e calJac3.chr22 45479086 64110 + 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60145665 81777 + 64156825 T a score=46443.000000 s hg38.chr19_GL949753v2_alt 195455 49 + 796479 GGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACGGGGTCAGCG- s panTro4.chr19 59127221 49 + 63644993 GGCCTGGGCTTGAGCTGAG----CCTTTGAGCTCAGAGAGGACCGGGTCAGGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005814 48 + 60714840 GGGCAGGGCCAGAGCTGAG-----GTTTGAGCTCAGAGAGGACAGGGTCGGGG- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47249699 49 + 51301725 GGGCAGGACCTGAGCTGAG----CCTTTGAGTTCAGAGAGGACAGGGTCAGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891740 49 + 50890351 GGGCCGGGCCGGAGCTGAG----CCTTTGAGCTCAGAGGGGACAGGATCAGGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543196 48 + 49145316 -GGCAGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACATGGTCAGGG- i calJac3.chr22 I 64110 C 0 s mm10.chr7 3715991 36 + 145441459 -----AGTATGGAAGTGA-------TTCATGCT--GAGAAGTCAGGATCA---- i mm10.chr7 I 2 C 0 s canFam3.chr1 19704275 49 - 122678785 -CACAGGGCC----CTGAGGACAATGTGGCATATGAAGGAGACAGGGTCAGGGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55086587 8301 + 59248254 M e rheMac3.chr19 60145665 81777 + 64156825 T a score=281872.000000 s hg38.chr19_GL949753v2_alt 195504 125 + 796479 CCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTGGGGGTTGGAGCTGTATGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAA s panTro4.chr19 59127270 125 + 63644993 CAGTCACCTGAGACCATGAGTTCCAGGGGGTCACTGGGGAAAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGTGTGGGCTGAGATCACAGGACTCACGGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005862 125 + 60714840 CCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGAAAGACAGCAGGTGGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGACATCACAGGACTCATGGGGAA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55095100 125 + 59248254 CCCTCACCTGAGGCCAGAATCTCCAGGGGGTCACTGTGGTGGGACCACACCTGGGGGGTGTTGCTGTAGTATCCATAGCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAA i macFas5.chr19 M 8301 I 20102 s papAnu2.chr19 47249748 125 + 51301725 CCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGTCAGGAGGTAGGGGTTGGAGCTGAATGAGCCATAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891789 125 + 50890351 CCCTCACCTGAGACCATGAGCTCCAGGGGGTCACTGGGGAGAGACAGCAGGTGGGGGCTGTAGCTGTGTGAGCCGTAGCACCTGTAGGTCCCTGTGTGGACTGAGGTCACAGGACCCATGGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543244 125 + 49145316 CCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAA i calJac3.chr22 C 0 C 0 s mm10.chr7 3716027 124 + 145441459 -CCTCACCTGAGACTGTGAGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19704324 125 - 122678785 CCCTCACCTGAGACCAGGATCTTCACGGGGACACTTGGGTGTGATAACAGGTAGGGGGAGGTGTTGAATGAGCCATAGCACCTGTAGGTGCCCCTGTGGGCTGAGGTCACAGGACTCATGGAAAA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=2548.000000 s hg38.chr19_GL949753v2_alt 195629 1 + 796479 T s panTro4.chr19 59127395 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56005987 1 + 60714840 T i ponAbe2.chr19 C 0 I 4081 s papAnu2.chr19 47249873 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46891914 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543369 1 + 49145316 T i calJac3.chr22 C 0 C 0 s mm10.chr7 3716151 1 + 145441459 T i mm10.chr7 C 0 C 0 s canFam3.chr1 19704449 1 - 122678785 T i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55095225 20102 + 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=4011.000000 s hg38.chr19_GL949753v2_alt 195630 2 + 796479 TC s panTro4.chr19 59127396 2 + 63644993 TC i panTro4.chr19 C 0 I 19451 s papAnu2.chr19 47249874 2 + 51301725 TC i papAnu2.chr19 C 0 T 61723 s chlSab2.chr6 46891915 2 + 50890351 TC i chlSab2.chr6 C 0 I 25231 s calJac3.chr22 45543370 2 + 49145316 TC i calJac3.chr22 C 0 I 15149 s mm10.chr7 3716152 2 + 145441459 TC i mm10.chr7 C 0 N 0 s canFam3.chr1 19704450 2 - 122678785 TC i canFam3.chr1 C 0 I 22318 e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e macFas5.chr19 55095225 20102 + 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=0.000000 s hg38.chr19_GL949753v2_alt 195632 18000 + 796479 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 45543372 15149 + 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 47249876 61723 + 51301725 T e macFas5.chr19 55095225 20102 + 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T e panTro4.chr19 59127398 19451 + 63644993 I a score=100.000000 s hg38.chr19_GL949753v2_alt 213632 1 + 796479 G s panTro4.chr19 59146849 1 + 63644993 g i panTro4.chr19 I 19451 C 0 e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 45543372 15149 + 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 47249876 61723 + 51301725 T e macFas5.chr19 55095225 20102 + 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=1692.000000 s hg38.chr19_GL949753v2_alt 213633 6 + 796479 AATTCC s panTro4.chr19 59146850 6 + 63644993 aattcc i panTro4.chr19 C 0 C 0 s calJac3.chr22 3646520 6 - 49145316 AATTCC i calJac3.chr22 n 15149 C 0 e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 47249876 61723 + 51301725 T e macFas5.chr19 55095225 20102 + 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=153876.000000 s hg38.chr19_GL949753v2_alt 213639 201 + 796479 TCAAGAGTTAGTGTTTGCTGGCCTCCAAGAGGCAAGGATCTctgggaacttaagacagagaagcacttcacactcacccatgagctcttttccgtgggtctcaactgggcattcacaacatagattggaagtaaggtggagacccaaaaTTTGTGATCAGACATGATTACCTTCCACAGTGTGTGGCCTGAAATCTCACCC s panTro4.chr19 59146856 201 + 63644993 tcaagagttagtgtttgctggcctccaagaggcaaggatctctgggaacttaaggcagagaagcacttcacactcacccatgagctcttttccgtgggtctcaactgggcattcacaacatagattggaagtaaggtggagacccaaaaTTTGTGATCCGACATGATTACCTTCCACAGTGTGTGGCCTGAAATCTCACCC i panTro4.chr19 C 0 C 0 s macFas5.chr19 4099196 201 - 59248254 tcaagagtcggtgtttgctggcctccaagagacgaggatctctgggaacttaagacggaggagcacttcacattcagccacgagctcttttccgtggatctcaactggacattcacaacatagatcggaagtaaggtggagacCCGAAATTTGTGGTCAGACATGATTACCTTCCACTGTGCGTGGCCTGAAACCTCTCCC i macFas5.chr19 n 20102 n 20102 s papAnu2.chr19 4067516 201 - 51301725 TCAAGAGTCCGTGTTTGCTGGCCTCCAAGAGACGAGGATCTCTGGGAACTTAAGACAGAGGAGCACTTCACATTCAGCCACGAGCTCTTTTCCGTGGATCTCAACTGGACATTCACCACATAGATTGGAAGTAAGGTGGAGACCCAAAATTTGTGGTCAGACATGATTACCTTCCACTGTGCGTGGCCTGAAACTTCTCCC i papAnu2.chr19 n 61723 n 61723 s calJac3.chr22 3646526 200 - 49145316 TGGAGAGTTCATGTTTGCTGGCCGACAAGAAACAAGTATTTCTGGGAACCTAAAACAGAAGAGCACTAAACACTCACCCACAGGCTTTTTTCCAGGGGTCTCAACTGGGCATTCACAAGACA-ATTGTGAGTAAGGCGGAGACCCAATATTTGCGGTCAAACATGATTACCTTCCACTGTGCATGGTCTGAAATCTCACCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=600.000000 s hg38.chr19_GL949753v2_alt 213840 2 + 796479 CC s panTro4.chr19 59147057 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s calJac3.chr22 3646726 2 - 49145316 CC i calJac3.chr22 C 0 n 0 e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 4067717 61723 - 51301725 I e macFas5.chr19 4099397 20102 - 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=582.000000 s hg38.chr19_GL949753v2_alt 213842 6 + 796479 CTCTGG s panTro4.chr19 59147059 6 + 63644993 CTCTGG i panTro4.chr19 C 0 C 0 e canFam3.chr1 19704452 22318 - 122678785 I e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 3646728 0 - 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 4067717 61723 - 51301725 I e macFas5.chr19 4099397 20102 - 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=932.000000 s hg38.chr19_GL949753v2_alt 213848 6 + 796479 ACGTCC s panTro4.chr19 59147065 6 + 63644993 AGGTCC i panTro4.chr19 C 0 C 0 s canFam3.chr1 19726770 6 - 122678785 ATGCCC i canFam3.chr1 I 22318 C 0 e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 3646728 0 - 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e chlSab2.chr6 46891917 25231 + 50890351 I e papAnu2.chr19 4067717 61723 - 51301725 I e macFas5.chr19 4099397 20102 - 59248254 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=3253.000000 s hg38.chr19_GL949753v2_alt 213854 7 + 796479 TAGATTG s panTro4.chr19 59147071 7 + 63644993 TAGATTG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55115327 7 + 59248254 TAGATTT i macFas5.chr19 I 20102 C 0 s chlSab2.chr6 46917148 7 + 50890351 TAGATTT i chlSab2.chr6 I 25231 C 0 s canFam3.chr1 19726776 7 - 122678785 TACATGC i canFam3.chr1 C 0 T 22948 e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 3646728 0 - 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=546.000000 s hg38.chr19_GL949753v2_alt 213861 1 + 796479 T s panTro4.chr19 59147078 1 + 63644993 T i panTro4.chr19 C 0 C 0 s macFas5.chr19 55115334 1 + 59248254 T i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46917155 1 + 50890351 T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e calJac3.chr22 3646728 0 - 49145316 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=11600.000000 s hg38.chr19_GL949753v2_alt 213862 16 + 796479 CCTCCAGAGCCTTCTG s panTro4.chr19 59147079 16 + 63644993 CCTCCAGAGCCTCCTG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55115335 16 + 59248254 CTTGCAGAACCTCCTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46917156 16 + 50890351 CTTCCAGAACGTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558521 16 + 49145316 CTTCCAGAACCTCCTG i calJac3.chr22 I 15149 C 0 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=428072.000000 s hg38.chr19_GL949753v2_alt 213878 531 + 796479 GGATCATCAGATCTGTCCCTGAGGCTCCACCACGCTGAAGGGTGCATTGTCCTCTCCGCTGTTCACCTCCCGGCTGCATCTTGGGGGTTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACAGCAGGACCAAGCCTGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTTGGCGTGTGAGGCTGGGGATGGTGGGCAAAGAGGTCACAGAGGTCCGGGCAGATCAACTTCACCCAGGACCCCTGGATGCCCAACCCAGGGCA--CCCCCCATCCGC--CATTGACAGAACCTGACCCTCTGTGCCC-GCCCCATAACTG------------------------------TCTGACTTGTTTTGTGATGGGGTGAGGGTCTCAGCTCCTCCTGAGAATCAAAACAGAAGGG-------GAGAGC------------CCTGAGC-----CAGCCTCTCCCCTGGGCTCTGCGTTCTTAT--T-----------CTTCCAGGCCTCATGACGTGGCTTTTACGGAGTTCCTCAATAAACCCTCCCTCTCCTGCAGCAGGGCTCCCTCCAGTCTCCTCATGAAACTATT s panTro4.chr19 59147095 561 + 63644993 GGATCATCAGAGCTGTCCCTGAGGCTTCACCACGCTGAAGGGTGCATTGTCCTCTCTGCTGTTCACCTCCTGGCTGCATCTTGGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGACCACCAGGACCAAGCCTGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTTGGCGTGTGAGGCTGGGGATGGTGGGCAAAGAGGTCACAGAGGTCAGCGCAGATCAACTTCACCCAGGACCCCTGGATGCCCAACCCAGGGCA--CCCCCTATCCCC--CATTGACAGAACCTGACCCTCTGTGCCC-GCCCCATAACTGAGAGCATCTCCTCACTCATCAGTCTTGCGGTCTGACTTGTTTTGTGATGGGGTGAGGGTCTCAGCTCCTCCTGAGAATCAAAACAGAAGGG-------GAGAGC------------CCTGAGC-----CAGCCTCTCCCCTGGGCTCTGTGTTCTTAT--T-----------CTTCCAGGCCTCATGACGTGGCTTTTACGGAGTTCTTCAATAAACCCTCCCTCTCCTGCAGCAGGGCTCCCTCCAGTCTCCTCATGAAACTATT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55115351 562 + 59248254 GGATCATCACATCTGTCCCCGAGGTTCCACCACTCCGAAGGGTGCACTGTCCTCTCTGCTGTTCACCTCCCGGCTGCCTCTTGGGGGCTTCTCCGGCTGCGCAGAGCCTCAAATAACAGAATCCCGAGGACCACCAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTGGGGATGTGAGGCTGGGGATCATGGACAAAGAGGCGACAAAGGTCAGGGCAGATCAGCATCACCCAGGACCCCTGGATGCCC-ACCCAGCGCACGCCCCCCATCTCC--TGTTGACAGACCCTGACCCTCTGTGCCA-GTCCCATAACTGAGAGCATCTCCTCACTCATCAGTCTTGGGGTCTGACTTGTTTTGTGATGGGCTGAGGGTCTCAGCTCCTCCTGAGAATGAAAACAGAGGGG-------GAGAGC------------CCTGAGC-----CAGCCTCTCCCCTGGGCTCTGCGTTCTTAC--T-----------CTTCCAGGCCTCATGACGTGGCTTTTACAGAGTTCCTCAATAAATCCTCCCTCTCCTGGAGCAGGGTTCCCTCCAGTCTCCTCATGGAACTAGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46917172 559 + 50890351 GGATCATAAGATCTGTCCCTGAGGCTCCATGTCTCTGAATGGTGTATTGTCCTCTCTGCTGTTCACCTGCTGGCTGCATCTTGGGGGCTTCTCTGGCTATGCTGAACCTCAAATAATAGAATCCCGAGGACCACCAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTGTGGGTGTGAGGCTGGGGATGGTAGAAGAAGAGATCTCAGAGGTCAGGGCAGATCAACATCACCTGGGACCCCTGGATACCC-ACCCAGGGCA--CCCCCCATCTCC--CGCTGACAGACCCTGACCCTCTGTTCCA-GTCCCATAACTGACAGCATCTCCTCACTCACCAGTCTTGGGGTCTGACTTGTTTTGTGATGGGGTGAGGGTCTCAGCTGCTCCTGAGAATGAAAACGGAGGGG-------GAGAG-------------CCTGAGC-----CAGCCTCTCCCCTGGGCTCTGCGTTCTTAC--T-----------CTTTCAAACCTCATGATGTGGCTTTCATGGAGTTCCTCAATAAACCCTTCCTCTCCTGGAGCTGGGTTCCCTCCAGTCTCCTCCTGGAACTAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558537 561 + 49145316 GGATCATCAGATCTGTTCCCGAGGCTCTGCCACTCTGAAGCGTGCACTG---TCTCTGCTGTTCACCTCCTGGCTGCATCTTGGGGGTTTCTCTGCCTGTGCTGAGCCTCAAATAGCAGAATCCCGAGGACCACAAGGATGAAGCCAGCCACGCCTATGCGGATGAGATTCTCCACTGTGTAATCCTGGAGGTGTGAGGCTGGGGATGGTAGACAAAGAGGCCACAGAGGTCAGGGCAGATCACAATTACCTAGGACCCCTGGATGTCC-ACCCAGGGCA--CCCACCACCTCC--CCTTGACAGGACCTGACCCTCTGTGCCCAGCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTTTTTTGTGGTGGGTTGAGGGTCTCAGCTGCTCCTAAGAATCAAAGAACAAGGATGTTGGTGAGAAG------------CTGAAG-------AGCCTCTCCCCTGGGTTCTGCATTCTTACATT-----------CCTCTGTCTCTTGTGTCGTGACTTT-ATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCG--TACCTCATTGGGTT-CT i calJac3.chr22 C 0 C 0 s mm10.chr7 3816805 579 + 145441459 GGGTCATCAGATTTATTTCCCAGAGTGTAGAACATTGAAAGATGCATTCTTTTCTCTTTAGATTAGTTCCCAGCTGCAGGGTGGGTCTGTCTATGGCTTCGCCAAGCCTCAGTGGCTAGAATCGAAAGGACTATGAGGACCACGACTGCCATCCCCATCCTGATCAGATTCTCTGTTGTGTGATCCTGGTTCTCTGTGGCTGTGG-TATTAGATACAGAAGTTACAGAAGTTAGGGATGGTCAAAGTTTCCTAA-----CTAAGCATCC-AACAAGGGCC--CTTGTTGTCCCCGGAGATGACAAGGTTCTACTCT---TACCT-GTACTATGACATGGAAT-TCTCTTTATTCGTCTGCCTAGGTTTTGGGCATGTTCTAGCATGAACAGATGTTCTCAGCTGGTCCTGAGAATAGTAGAAGAAGAG-------GAGTAGGATGTATCTGTACTTAAGTGGCCGTAGTGTTTCTTCTGAGTTCCACTCTATCAT--TTATTGTAGATGCCCATCATTTTCACCATATAAGCTT-ATAGAGTTCTGGGATGAATGTTTCTTGTTATACAGCTGGTTCCCCTCTCTTATTCTTACTAAATTCTT i mm10.chr7 N 0 N 0 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=29246.000000 s hg38.chr19_GL949753v2_alt 214409 42 + 796479 TCAGTTTTCCTGTGTTCTATGAATTTCAACGCTGCTCCTGAG s panTro4.chr19 59147656 42 + 63644993 TCAGTTTTCCTGTGTTCTATGAATTTCAACGTTGCTCCTGAG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55115913 42 + 59248254 TCAGTTTTCCTGTGTTCTATGAATTTAAACATTGCTCCTGAG i macFas5.chr19 C 0 I 1609 s chlSab2.chr6 46917731 42 + 50890351 TCAGTTTTCCTGTGTTCTATGAATTTAAATGTTGCTCCTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559098 42 + 49145316 TCAGCCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAG i calJac3.chr22 C 0 I 3608 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=-871.000000 s hg38.chr19_GL949753v2_alt 214451 2 + 796479 CC- s panTro4.chr19 59147698 2 + 63644993 TC- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55117564 1 + 59248254 -C- i macFas5.chr19 I 1609 I 1 s chlSab2.chr6 46917773 2 + 50890351 TC- i chlSab2.chr6 C 0 I 1622 s calJac3.chr22 45562748 2 + 49145316 -CT i calJac3.chr22 I 3608 C 0 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=31342.000000 s hg38.chr19_GL949753v2_alt 214453 47 + 796479 ATTTCCTCCCTCCCATGGGC--------------TGGATTCTCCACCTTCACTCCCTTCTT s panTro4.chr19 59147700 47 + 63644993 ATTTCCTCCCTCCCATGGGC--------------TGGATTCTCCGCCTTCACTCCCCTCTT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55117566 47 + 59248254 ATTTCCACCCTCCCATGGGC--------------TGGATTCTCCCCCTTCACTCCCCTGTT i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46919397 47 + 50890351 ATTTCCACCCTCCCATGGGC--------------TGGATTCTCACCCTTCACTCCCCTGTT i chlSab2.chr6 I 1622 C 0 s calJac3.chr22 45562750 61 + 49145316 ATTTCTACCCTCTCATTAGCTGAACCCTCCCCTGTGGACCCTCCCCCTTCACTCCCCTCAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19726783 22948 - 122678785 T e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=7789.000000 s hg38.chr19_GL949753v2_alt 214500 9 + 796479 TCC-TAGTGT s panTro4.chr19 59147747 9 + 63644993 TTC-TAGTGT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55117613 9 + 59248254 TTC-TAGTGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919444 9 + 50890351 TTC-TAGTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562811 10 + 49145316 TCCTTAGTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102999047 9 + 122678785 TCC-CAGTGA i canFam3.chr1 T 4672 C 0 e ponAbe2.chr19 56005988 4081 + 60714840 I e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=18212.000000 s hg38.chr19_GL949753v2_alt 214509 18 + 796479 CCCAGAGCTCTCCTGGGT s panTro4.chr19 59147756 18 + 63644993 CCCAGAGCTCTCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010069 17 + 60714840 CCCAAAGCTCTCCTGGG- i ponAbe2.chr19 I 4081 C 0 s macFas5.chr19 55117622 18 + 59248254 CCCAGAGCTCTCCGGGGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919453 18 + 50890351 CCCAGAGCTCTCCTGGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562821 17 + 49145316 -CCTGAGCTCTCCTAGGG i calJac3.chr22 C 0 T 83752 s canFam3.chr1 102999056 17 + 122678785 CAAGCAACTTCTCTGGG- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=99685.000000 s hg38.chr19_GL949753v2_alt 214527 77 + 796479 GCAGAGCCTGAGCTGAGCATTTGAGCTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGAG s panTro4.chr19 59147774 77 + 63644993 GCAGAGCCTGAGCTGAGCCTTTGAGCTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010086 77 + 60714840 GCAGGGCCTGAGCTGAGCCTTTGAGCTCAGAGAGGACAGGGTCAAGGCCCCCACCTGAGACCACGAGCTCCAGGGGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55117640 77 + 59248254 GCAGAGCGTCAGCTGAGCCTTTGAGCTCAGAGAAGACAGGGTCAGGGCCCTCACCTGAGACCATGAGCTCCAGGAGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919471 77 + 50890351 GCAGAGCCTGAGCTGAGCCTTTGAGCTCAGAGAAGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479086 77 + 49145316 GCAGGGCCTGAGCTGAGCCTTTGTGCTTAGAGAGAACAGGGTCAGGGCCCTCACCTGAGACCACCAGCTCCAGGGGG i calJac3.chr22 T 83752 C 0 s canFam3.chr1 102999073 67 + 122678785 -----GTGTAATCTCAGGAAGTGA-CTGAGGCAAGCCAAGGCTGAGCTCCTCCC----ACCCACCACCTCCTGACAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=1134.000000 s hg38.chr19_GL949753v2_alt 214604 5 + 796479 TCACT- s panTro4.chr19 59147851 5 + 63644993 TCACT- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55117717 5 + 59248254 TCACT- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919548 5 + 50890351 TCACT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102999140 6 + 122678785 CGACCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=1200.000000 s hg38.chr19_GL949753v2_alt 214609 2 + 796479 GG s panTro4.chr19 59147856 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55117722 2 + 59248254 CG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919553 2 + 50890351 CG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715368 2 + 145441459 GG i mm10.chr7 N 0 C 0 s canFam3.chr1 102999146 2 + 122678785 GG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e nomLeu3.chr10 102776392 10499 - 106955855 I e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=26021.000000 s hg38.chr19_GL949753v2_alt 214611 23 + 796479 CCTGACCCTGGG-GGGTTGAGGGG s panTro4.chr19 59147858 23 + 63644993 CCTGACCCTGGG-GGGTTGAGGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102786891 23 - 106955855 GGTGACCCTGGG-GGGCTGAGGGG i nomLeu3.chr10 I 10499 C 0 s macFas5.chr19 55117724 23 + 59248254 CCTGACCCTGAG-GGGTTGAGGGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919555 23 + 50890351 CCTGACCCTGAG-GGGTTGAGGGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715370 23 + 145441459 CCTGACTCCATG-CAGGTGACAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 102999148 23 + 122678785 -CTTACCCCGTGTGGGAAGAGGGG i canFam3.chr1 C 0 n 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=52702.000000 s hg38.chr19_GL949753v2_alt 214634 54 + 796479 CTGGTCCTCAGGACCTCCTGGGTCAGGACAGGGAGGTGAAGCCTGGGGCTACCT s panTro4.chr19 59147881 54 + 63644993 CTGGTCCTCAGGACCTCCTGGGTCAGGACAGGGAGGTGAAGCCTGGGGCTACCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102786914 54 - 106955855 CTGGTCCTCAGGACCTCCTGGGTCAGGACAGGGAGGTGAGGGCTGGGGCTGCCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55117747 54 + 59248254 CTGGTCCTCAGGACCTCTGGGGTCAGGACAGGGAGGTGAGGGCTGAGGCTGCCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46919578 54 + 50890351 CTGGTCCTCAGGACCTCTGGGGTCAGGACAGGGAGGTGAGGGCTGGGGCTGCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715393 52 + 145441459 --GGCCATGCCGAGCTTTAGGGGTAAGATAGGGAACTGAGTGTTTGTGTTCCCT i mm10.chr7 C 0 C 0 e canFam3.chr1 102999171 0 + 122678785 I e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=16600.000000 s hg38.chr19_GL949753v2_alt 214688 28 + 796479 T------GCTCCCCACATCAGCCCGGCTCCTCCT--- s panTro4.chr19 59147935 28 + 63644993 T------GCTCCCCACATCAGCCCGGCTCCTCCT--- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102786968 28 - 106955855 T------GCTCCCCACATCAGCCCAGCTCCTCCT--- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55117801 28 + 59248254 T------GCTCCCCACATGAACCCAGCTGCTTTT--- i macFas5.chr19 C 0 I 3 s chlSab2.chr6 46919632 28 + 50890351 T------GCTCCCCACATGAACCCAGCTGCTTTT--- i chlSab2.chr6 C 0 I 3 s mm10.chr7 3715445 29 + 145441459 GCTTTCAACTTCCCACAACTGCCCCACCC-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703835 28 - 122678785 T------GCTTC---CACTGCACCTGCTGCCCCTCCC i canFam3.chr1 T 22948 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e papAnu2.chr19 4067717 61723 - 51301725 I e rheMac3.chr19 60145665 81777 + 64156825 T a score=610.000000 s hg38.chr19_GL949753v2_alt 214716 3 + 796479 CCT s panTro4.chr19 59147963 3 + 63644993 CCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102786996 3 - 106955855 CCT i nomLeu3.chr10 C 0 T 10604 s macFas5.chr19 55117832 2 + 59248254 -CT i macFas5.chr19 I 3 I 1 s papAnu2.chr19 47188153 2 + 51301725 -CC i papAnu2.chr19 T 61723 I 1 s chlSab2.chr6 46919663 2 + 50890351 -CT i chlSab2.chr6 I 3 I 1 s mm10.chr7 3715474 2 + 145441459 -CC i mm10.chr7 C 0 I 1 s canFam3.chr1 19703863 2 - 122678785 CC- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e rheMac3.chr19 60145665 81777 + 64156825 T a score=125342.000000 s hg38.chr19_GL949753v2_alt 214719 92 + 796479 GGCTGGGCCCCAACATCTCTCTCTGCCTTGAACCCCCCAC--TCTTCACCAGCCCAGCCTCAGAGCCCCTGGGACACAAGCCC--------GTCCTTGAGGG s panTro4.chr19 59147966 92 + 63644993 GGCTGGGCCCCAACATCTCTCTCTGCCTTGAACCCCCCAC--TCTTCACCAGCCCAGCCTCAGAGCCCCTGGGACACAAGCCC--------GTCCTTGAGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102776395 88 - 106955855 GGCTGGGCCCCAACATCTCTCTCTGCCTTGACCCCCCCA------TCACCAGCCCAGCCTCAGAGCCCCTGGGACACAAGCCC--------GTCCTTGAGGG i nomLeu3.chr10 T 10604 C 0 s macFas5.chr19 55117835 92 + 59248254 GGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCCCAC--GCCTCACCAGTCCAGCCTCAGAGTCCCTGGGACACAGGCCT--------GTCCTTGAGGG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47188156 92 + 51301725 AGCTGGGCCCCAACACCTCCCTCTGCCTTGAACCCCCCAC--TCCTCACCAGCCCAGCCTCAGAGCCCCTGGGACACAAGCCT--------GTCCTTGTGGG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46919666 92 + 50890351 GGCTGGGCCCCAACACCTCCCTTTGCCTTGAACCCCCCAC--TCCTCACCAGCCCAGCCTCAGAGTCCCTGGGACACAAGCCT--------GTCCTAGAGGG i chlSab2.chr6 I 1 C 0 s mm10.chr7 3715477 91 + 145441459 TGATGAGCCTAAATACTTCTCTCTG----AATCTCCCTGC--TGT-----AGCCCAACCTCTGAGCCCCAGCTTCAGTGGTCTCTGGTGAGATCTTTGTTTG i mm10.chr7 I 1 I 26 s canFam3.chr1 19703865 85 - 122678785 AGATGGGTCCCCACCCCTCCCTATCCCATGAACACCCAGCCTCCTCCACCAGCCGAGACCCCTGGTGCC-----CATCGGCCC--------CCTTTCA---- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e rheMac3.chr19 60145665 81777 + 64156825 T a score=96181.000000 s hg38.chr19_GL949753v2_alt 214811 56 + 796479 GAGGGGAGTGGGATCCTTTGGGAGAC--------TCA-GACTG----CCCTGGGGGAGGCCGCGCTCCC s panTro4.chr19 59148058 56 + 63644993 GAGGGGAGTGGGATCCTTTGGGAGAC--------TCA-GACTG----CCCTGGGGGAGGCCGCGCTCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102776483 56 - 106955855 GAGGGGAGTGGGAATCTTTGGGAGAC--------TCA-GACTG----CCCCGGGGGAGGCCGCGCTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60063888 57 + 64156825 GAGGGGAATGGGATCCTCCAGGAGAC--------TCAGGGCTG----CCCTGGGGGAGGCCGTGCTCCC i rheMac3.chr19 T 81777 M 947 s macFas5.chr19 55117927 56 + 59248254 GAGGGGAATGGGAATCTTTAGGAGAC--------TCA-GACTG----CCCTGGGGGAGGCCGTGCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47188248 56 + 51301725 GAGGGGAATGGGATCCTTCAGGAGAC--------TCA-GACTG----CCCTGGGGGAGGCCACGCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46919758 56 + 50890351 GAGGGGAATGGGATCCTTCGGGAGAC--------TCA-GACTG----CCCTGGGGGAGGCCGCGCTCCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715594 64 + 145441459 GATAGAAATGAGGACTGTGGTGGGCCAAGAGCTGCCA-GGCAG----CCTGGGGTGGGAGAATACTCCC i mm10.chr7 I 26 I 2 s canFam3.chr1 19703950 33 - 122678785 --------------TCTCTGAGAGAC--------TGG-AACCAAAGCCCCTGGACG------------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C a score=211959.000000 s hg38.chr19_GL949753v2_alt 214867 157 + 796479 CACGAGGCCTCAGTGACTCACCA------GGTGTGGAGGGCGGCCCTGTGGGTGGGAGGCTGGAGCCTCCAGAGTGTCCT--GGAAGGAGCACGGGAGGCGGGTGAGGGGC-GGGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCA---CTCTCCTGCTTCCGCCCAG s panTro4.chr19 59148114 157 + 63644993 CACGAGGCCTCAGTGACTCACCA------GGTGTGGAGGGCGGCCCTGTGGGTGGGAGGCTGGGGCCTCCAGAGGGTCCT--GGAAGGAGCACGGGAGGCGGGTGAGGGGC-GGGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCA---CTCTCCTGCTTCCGCCCAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102776539 157 - 106955855 CAAGAGGCCTCAGAGACTCACCA------AGTGTGGAGGGCGGCCCTGTGGGTGGGGGTCTGGAGCCTCCAGGTGGTCCT--AGAAAGAGCACAGGA-GCGGGTGAGGGGCTGGAAGCTGTCCATGGAGTGCACCCTTCCACT---CCCA---CTCTCCTGCGTCCACCCAG i nomLeu3.chr10 C 0 M 151 s macFas5.chr19 55117983 156 + 59248254 CAAGAGGCCTCAGTGACTCACCA------GGGGTGGATGGTGGCCCTGTGGGTGGGGGGCTGGAGTCTCCAGAGGGTCCT--GCAAGGAGCACAGGAGGCCGGTGAGGGAC-TCGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCA---CTCTCCT-CATCCGCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47188304 156 + 51301725 CAAGAGGCCTCCGTGACTCACCA------GGGGTGGAGCGTGGCCCTGTGGGTGGGGGGCTGGAGCCTCCAGAGGGTCCT--GCAAGGAGCAT-GGAGGCAGGTGAGGGGC-TGGGACTGACCATAGAGTGCACCCTTCCACT---CCCA---CTCTCCTGCATCTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46919814 157 + 50890351 CAAGAGGCCTCAGTGACTCACCA------GGTGTGGAGCATGGCCCTGTGGGTGGGGGGCTGGAGCCTCCAGAGGGTCCT--GCAAGGAGCACAGGAGGCAGGTGAGGGGC-TGGGGCCGTCCATGGAGTGCACCCTTCCACT---CCCA---CTCTCCTGCATCTGCCCAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715660 154 + 145441459 CACAGAGTACCTGATACTTACCACCTAGTGGCATGGA------CATTGTGGGTGGCGGGGTAGAGGTTTCGATGGGTCCTA-GGAAAGAGAACAAGAAGAGGACGAGGATT-AGATGCAAGCCCAGGA-------TCCTCACTTGGTTCA---CTGTCCTCTATCTGCCCTG i mm10.chr7 I 2 C 0 s canFam3.chr1 19703983 152 - 122678785 ---GACGCCCCTGTAACTCACCA------GCTGTTGGGCTGGATATTGTGGGTGGGGGACCATGGTGTCCAGAGGATCCTGTGCAAAAAG-ACAGGA-GCG-----GGGGC-AGGAGCTTCCCTTAGAGACCCTGTCTATGCT---CACACCCCTCCTCTTCATTTACCCTG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e rheMac3.chr19 60063945 947 + 64156825 M a score=211435.000000 s hg38.chr19_GL949753v2_alt 215024 260 + 796479 TGGATTCCCTGGAACCATCTCTCTGCCCACCTGGTGCCTTCTGCATGCCAG----GCAG-GGGAGAACGGGTGGCCACGCCTAGGAGAACCCCTGTTGGCCTCCTCCCCTCTG--AGGGCTGGGTGCCCTCTGGCTAAGCCTCCCTCAC--AGCCTCCCTCGGTCCATCCCAGCCGAGAGCTCTCCTGGGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACGGGGTCA-GCGCCCTCACCTGAGACCATGAGTTCCAGGGGC s panTro4.chr19 59148271 257 + 63644993 TGGATTCCCTGGAACCATTTCTCTGCCCACCTGGTGCCTTCTGCATGCCAG----GCAG-GGGAGAACGGGTGGCCATGCCTAGGAGAACCCCTGTTGGCCTCCTCCCCTCTG--AGGGCTGGGTGCCCTCTGGCTAAGCCTCCCTCAC--AGCCTCCCTCAGTCCATCCCAGCTGAGA--TCTCCT-GGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGAGGACGGGGTCG-GGGCCCTCACCTGAGACCATGAGTTTCAGGGGG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55118139 244 + 59248254 TGGATCCCCGGGAACCATTCCTCTGCCCACCTGGTACCTTCTGCATGCCAG----GCA--AGGAGAACGGGTGGCCATGCCTAGGAGAAGCTCTGTTGGCCTCCTCCCCTCTG--AGGGCTGCGTCCCCTCTGGCTAAGCCTCCCTCAC--------------TCCATCCCAGCTGAGA--TCTCCG-GGGGCCTGGGCCTGAGCTGAG----CCTTTGAGCTCAGAGGGGACAGGATCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47188460 243 + 51301725 TGGATCCCCTGGAACCATTCCTCTGCCCACCTGGTACCTTCTGCATGCCAG----GCA--AGGAGAACGGGTGGCCATGCCTAGGAGAACCCCTGTTGGCCT-CTCCCCTCTG--AGGGCTGCGTCCCCTCTGGCTAAACCTCCCTCAC--------------TCCATCCCAGCTGAGA--TCTCCG-GGGGCCTAGGCCTGAGCTGAG----CCTTTGAGCTCAGAGGGGGCAGGATCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46919971 258 + 50890351 TGGATCCCCTGGAACCATTCCTCTGCCCACCTGGTACCTTCTGCATGCCAG----GCA--AGGAGAATGGGTGGCCATGCCTAGGAGAAGCTCTGTTGGCCGCCTCTCCTCTG--AGGGCTGCGTACCCTCTGGCTAAACCTCCCTCAC--AGCCTGCCTCGGTCCATCCCAGCCGAGAGCTCTCCT-GGGGGCCGGGCCGGAGCTGAG----CCTTTGAGCGCAGAGAGGACAGGGTCA-TGGCCCTCACCTGAGACCATGAGCTCCAGGGGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715814 242 + 145441459 TAAACTCTGCAAGA---------TACTGA--TAGTCGCTACTCCAAACCTAGATTGCAGTAGAGGACTGAGTGGACATTACTCGAGGGAGCACTGCTAGCATTAATTCCTCTGCCAGGGAAAC-TGTCTTCTGACAAAGCCATCTTCCTTTTGTCTCCTTAATCCCAACCCAGTAAACAGCTCTGCT-ACAGTATGGAAGTGA------------TTCATGCT--GAGAAGTCAGGATCA-----CCTCACCTGAGACTGTGAGCTCCACAGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19704135 219 - 122678785 -AGGTCCCCAGGTACTCCTCCTCC-TCCACGTGGAAAATTCTG-GTGACGG---------GGGCGAGGGAAGGGGCAGGAGTGGGAG----------GGCAG-------TGTG--AAGGGTGGACTCCCTCAG----AGCCCCTCTCTT---------------CCATCCCAGCCCCGTGCTCTTGT-GGGCACAGGGCC----CTGAGGACAATGTGGCATATGAAGGAGACAGGGTCAGGGGCCCTCACCTGAGACCAGGATCTTCACGGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010163 0 + 60714840 C e calJac3.chr22 45479163 0 + 49145316 C e nomLeu3.chr10 102776696 151 - 106955855 M e rheMac3.chr19 60063945 947 + 64156825 M a score=768889.000000 s hg38.chr19_GL949753v2_alt 215284 338 + 796479 TCACTGGGGAAAGACAGCAGGTGGGGGTTGGAGCTGTATGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGCTCCGTACATTGATCTCAGACGCAGTGGGGGATGGGCTGCCCCTTCTTTGGTCAGAAGGAAAGTGTCAAACTGCCACCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCTGTGCTGACAGGGAGACGGTGTCATAGATCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GCTCTGAGCTGACACCTCC s panTro4.chr19 59148528 338 + 63644993 TCACTGGGGAAAGACAGCAGGTGAGGGTTGGAGCTGTATGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGATTCATGGGGAATTCAGCCTGGTACTTTTGAGATTGGTACTTTGATCTCAGACGCAGCGGGGGATGGGCTGCCCCCTCTTTGGTCAGAAGGAAAGTGTCGAACTGCCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGTCCGGCTGCAGCGAGAGGGAGACTCTGTCATAGAACTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGGTGCCCCACCTT-GCTCTGAGCTGACACCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010163 338 + 60714840 TCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACTTAGGAGATTGGTACTTTGATCTTAGATGCAGCGGGGCATTAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTCAAACTGCCCCCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCTGGCATGGATCTGTTCTGGAGAGAAGAAGGATGGGGGAGGGGCTGCCCCACCTT-GTTCTGAGCTGAGACCTCC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55118383 336 + 59248254 TCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGAGTGAGCTGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACTGCTGAGCTTGGTGCTCTGATCTCAGATGCAGCGGGGGATGGGCTGCCCCCTCCCTGGTCAGAAGGAAAGTGTGGAACTGCGCCCGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCACCGAGAGGGAGACCACATCATAGAACTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCT--CCCACCTT-GATCTGAGCGGAGACCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47188703 336 + 51301725 TCACTGGGGACAGACAGCAGGTGGGGGTTGGAGCTGAGTGAGCTGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGAAATTCAGCCTGGTACTTAGGAGCTCGGTGCTTTGATCGCAGATGCAGCGGGGGATGGGCTGCCCCGTCCTTGGTTAGAAGGAAAGTGTGGAACTGCTCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGTCACCGTGGGACCCGGCTGCACGGAGAGGGAGACCACATCATGGAACTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCT--CCCACCTT-GATCTGAGCTGAGACCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920229 338 + 50890351 TCACTGGGGAGAGACAGCAGGTGGGGGCTGTAGCTGTGTGAGCCGTAGCACCTGTAGGTCCCCTTGTGGACTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACTTAGGAGCTCGGTGCTTTGATCTCAGACGCAGCAGGGGATGGGCTGCCCCCTCCTTAGTCAGAAGGAAAGTGTGGAACTGCCCCCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCTTGGGACCCGGCTGCACCGAGAGGGAGATCGTGACGTAGAACTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GCTCTGAGCTGAGACCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479163 336 + 49145316 TCACTGGGGAGGGACAGCAGGTAGGCGTTGGATCTGTGTGAGCTGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTTACAGGACTCATGGGGAATTCAGCCTGGTCCTTATCAGATTGGTGCTTTGATCGTAGACGCACGGGGGCATCAGCTGCTCCCGCCTTGGTCAGAAGGAAAGTGTCCATCCACCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAAGCCACCGTGGAATTCGGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTGGAGAGAACAAGGAT-GGTGAGGGGCTG-CCCGACTT-GTTCTGAGCTGAGACCTCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3716056 336 + 145441459 GCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTTGATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCTCCTTGGACAGAATGAAAGTATCCACAGAGTCCATTGACCAACACAGCAGGCTCACGGTCTCTCCTGAGTGCACTGTGTGGTTAGGCTGCACTGAGAGGGAAGGAGTGAGAGGGAGCTGTCCTAAAGAGAAGAGGCAT-GATGAGAGGCTA-GCTTCCTT-GTTCTGAGCTCCAATCACA i mm10.chr7 C 0 C 0 s canFam3.chr1 19704354 335 - 122678785 ACACTTGGGTGTGATAACAGGTAGGGGGAGGTGTTGAATGAGCCATAGCACCTGTAGGTGCCCCTGTGGGCTGAGGTCACAGGACTCATGGAAAATTCCGCCTGGTACAGCCCAGAAGAGTATTTTGATCTAAGACGCAGTGGGGGATTGGCTGCCCCCTCCTTGGACAGAAGGAAAATATCCACAGAGCTCAGTGACTGACACAGCAGGGTCACATTCTCTCCTGGGGCCACAGTGGGTCCTGGCTGCACCTGGAGGGAGGGCGTGTAGGGGAACTGTCCTAGAGAGAGGAAGGGTGGGTGAGGGGCTGTCCAGCCCTAGTTCTGACCTGAATC---- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102776696 151 - 106955855 M e rheMac3.chr19 60063945 947 + 64156825 M a score=185861.000000 s hg38.chr19_GL949753v2_alt 215622 92 + 796479 CCAGGCCTCTCCCTGGGACCCTCAGtgtctctgtctctgttttctctgagtct-cgcct-ccccgcccatcccctgtctctgtctgtctctcCC- s panTro4.chr19 59148866 93 + 63644993 CCAGGTCTCCCTCTGGGACCCTCAGTGtctctgtctctgttttctctgagtctccccct-ccctgcccatcccctgtctctctctgtctctccc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010501 93 + 60714840 CCAGGCCTCCCTCTGGGACCCTCAGTCTCCCTGTCTCTGTTTTCTCTGAGTCTCCCCCT-CCCCGCCCATCCCCTGTCTCTGTCTGTCTCTCCC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776849 92 - 106955855 CCGGGCCTCTCTCTGGGACCCTCAGTCTCTCTGTCTCTGTTTTCTCTGAGTCT-CCCCT-CCCCGCCCATCCCCTGTCTCTGTCTGTCTCTCCC- i nomLeu3.chr10 M 151 C 0 s macFas5.chr19 55118719 87 + 59248254 CCAGGCctctctctggggccctcagtctctctgtctctgttttctctgagtctccccct-ccc--cccatcccctgtc----tctgtctctccc- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189039 92 + 51301725 CCAGGCctctctctgggaccctcagtctgtctgtctctgttttctctgagtctccccctcccc--cccatcccctgtctctatctgtctctccc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920567 91 + 50890351 CCAGctctccctctgggaccctccgtctctctgtcactgttttctctgagtctccccct-ccc--cccatcccctgtctctgtctgtctctccc- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479499 70 + 49145316 CCAGGCCTCTCTCTGGGACCCTCAGTTT--CTGTCTCTGTTTTCTCTGAGTCTCCCCGT-C---------------------TCTATCTCTTCC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3716392 79 + 145441459 CATGACTCCACCCTGAGAACCTGGGCCT--CTGTCTC--TTTTCTCTGA-----------CTGAGCTCAACTCCTGTTCTCATCTTCTTGTGAT- i mm10.chr7 C 0 I 5 s canFam3.chr1 19704689 54 - 122678785 ---------------------------------TCTCTGTGTCCTCTGAGTCTCTCCCA-TC---CTCATCCCGTATT----TCTGTCTCTTCCC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60063945 947 + 64156825 M a score=152736.000000 s hg38.chr19_GL949753v2_alt 215714 47 + 796479 TCCCTTGGGACCCCCACCCCTCATCCCGGCCAT--CACCACCTGGGCTC s panTro4.chr19 59148959 47 + 63644993 tccctTGGGACCCCCACCCCTCATCCCGGCCAT--CACCACCTGAGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010594 47 + 60714840 TCCCTTGGGACCCCCACCCCTCATCCTAACCAT--CACCACCTGGGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102776941 45 - 106955855 TCCCTTGGGA-CCCCACCCCTCATCCTGGCCAT--CACCACCTGGGCT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60064910 47 + 64156825 TCCCTTGGGACCCCCGCCCCTCATCCCAGCCAT--CACCACCTGGGCTC i rheMac3.chr19 M 947 I 121 s macFas5.chr19 55118806 47 + 59248254 tcCATTGGTGCCCCCACCCCTCATCCCGGCCAT--CAACACCTGGGTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189131 47 + 51301725 tccattggtgcccccgcccctcatcccGGCCAT--CACCACCTGGGCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920658 49 + 50890351 tccctTGGGGCCCCCACCCCTCATGCCAGCCATAAAACCACCTGGGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479569 47 + 49145316 TCCCTTGGGACCCCCACCCCTCATCCCAGCCAT--CATCACCTGGGCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3716476 46 + 145441459 CTGCTTAGGATTCCTGTATC-CATCCTAGCCAT--AAGCTCCCCAGCCC i mm10.chr7 I 5 I 14 s canFam3.chr1 19704743 46 - 122678785 -TCCCTGGAGACCCCACCTCCCAGGTTGGCCAC--CATCAGCTGGGCTT i canFam3.chr1 C 0 C 0 a score=361888.000000 s hg38.chr19_GL949753v2_alt 215761 89 + 796479 CCCCGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAA-CCCGCTG-GGCTCCTCACCTGCCATCAGGATGTTCAGGGGGTCGCTGGGG s panTro4.chr19 59149006 89 + 63644993 CCCCGGCAGGG-CCTGTGCGGAGCCTGGGTCCCTGACTGAA-CCTGCTG-GGCTCCTCACCTGCGATCAGGATGTTCAGGGGGTCGCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56010641 88 + 60714840 CCCCAGCAGGG-CCTGTGCAGAGCCT-GGTCCCTGACTTAACCCCGCTG-GGCT-CTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGG i ponAbe2.chr19 C 0 M 280 s nomLeu3.chr10 102776986 89 - 106955855 CCCCGGCAGGG-CCTGTGCGGAGCCTGGATCCCTGACTGAA-CCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065078 89 + 64156825 CCCCGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAA-CCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGG i rheMac3.chr19 I 121 C 0 s macFas5.chr19 55118853 89 + 59248254 CCCTGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAA-CCCGCTG-GGCTCCTCACTTGAGATCAGGATGTCCAGGGGGTCACTGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189178 89 + 51301725 CCCTGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAA-CCCACTG-GGTTCCTCACTTGAGATCAGGATGTCCAGGGGGTCACTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920707 89 + 50890351 CCCCGGCAGGG-CCTATGCAGAGCCTGGGTCCCTGACTGAA-CCCGCTG-GGCTCCTCACTTGAGATCAGGATGTCCAGGGGATCGCTGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479616 88 + 49145316 -CCTGGCAGGG-CCTTTGCAGAGCCTGGGTCCCTGACTGAA-CCCGCTG-GGCTCCTCACCTGAGATCAGGATGTCCAGGGGGTCACTGGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3716536 89 + 145441459 CCCCATGAGAG-CCTGAGCAGAGGCTAGGTCCCTGACTGAG-TCTGTTG-AGTTCCTCACCTGTGATCAGGATGTCCAGGGGCTCACTGGAG i mm10.chr7 I 14 C 0 s canFam3.chr1 19704789 87 - 122678785 CCCTCACAGGGACCTGTGTAGAGTCTGGGGCTTTCCCTGCA-----CTGTGGCCCCTCACCTGCGACCAGGATGTCCAGGGGGCCACTGGAG i canFam3.chr1 C 0 C 0 a score=236581.000000 s hg38.chr19_GL949753v2_alt 215850 66 + 796479 GCCGACCACTCGGAGGAGAGGTTGTGTGCACCATAGCACCTGTACTGGCCCCCGTGGGAGGGGCTC s panTro4.chr19 59149095 66 + 63644993 GCCGACCACTCGGAAGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCATGGGAGCGGCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777075 66 - 106955855 GCCGACCACTCTGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCACCGTGGGAGCGCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065167 66 + 64156825 GCCGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGACACCCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55118942 66 + 59248254 GCCGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189267 66 + 51301725 GCCGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920796 66 + 50890351 GCCGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479704 66 + 49145316 GCTGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGACCCTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3716625 66 + 145441459 GCTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACTC i mm10.chr7 C 0 C 0 s canFam3.chr1 19704876 66 - 122678785 GCTGACCACTGGGAGGAGAGGTTGTGTCCACCGTAGCATGTGTACCGGCCCCTGTGGAAGGGTCCC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56010729 280 + 60714840 M a score=579037.000000 s hg38.chr19_GL949753v2_alt 215916 159 + 796479 ACAGGGCCCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGGGCTG--CTGGCCAGGGCGCTGGAGGAAG--TCACGTT-CCCCCTCCTTATACAGAACAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGCTCTGCCCAGGGGCCAGGACA s panTro4.chr19 59149161 159 + 63644993 ACAGGGCCCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGGGCTG--TGGGCCAGGGAGCTGGAGGAAG--TCACGTT-CCCCCTCCTTGTACAGAGTGAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGCTCTCCCCAGGGGCCAGGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56011015 165 + 60714840 ACAGGGCCCAGGGTGAAGTTGGCCTTGGAAGATCCCAGCCTGGGGCTGGCCAGGCCAGGGCGCTGGAAGAAGGTCAACGTTCCCCCCTCCTTATACAGAGCAAATCTGTCATAGCCAACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACA i ponAbe2.chr19 M 280 I 501 s nomLeu3.chr10 102777141 159 - 106955855 ACGGTGCCCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGGGCTG--CCGGCCAGGGTGCTGGAGGAAG--TCACGTT-GCCCGTCCTTGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCCACACTGCAGGGTCAGGGTCTCTCCAGGGGCCACAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065233 159 + 64156825 ACAGGGCCCAGGGTAAAGTTGGCC-TGGGAGAGCCCAGCCTGGGGCTG--CTGGCCAGAGCCCTGGAGGAGG--TCACGTT-CCCCCTCCTTGTACAGAGCAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGATCAAGTGCTCTCCAGGGACCACGATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55119008 159 + 59248254 ACAGGGCCCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGTGCTG--CCGGCCAGGGCACTGGAGGAAG--TCACGTT-CTCCCTCCTTGTACAGAGCAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189333 159 + 51301725 ACAGGGCTCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGCGCTG--CTGACCAGGGCGCTGGAGGAAG--TCACGTT-CCCCCTCCTTGTACAGAGCAAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGATCAAGTTCTCTCCAGGGGCCACGAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46920862 156 + 50890351 ACAGGGCCCACGGTGAAGTTGACT-TGGGAGAGCCCAGCCTGGAGCT-----GACCAGGGCTCTGGAGGAAG--TCACGTT-CCCCCTCCTTGTACAGAGCAAATCTGTCGTAGCCGACGTTAGAGCCACACTGCAGGGTCAGGGTCTCTCCAGGGGCCACGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479770 159 + 49145316 ATAGGGCTCAGGGTGAAGTTGGCC-TGGGAGAGCCCAGCCTGGAACTT--CTGGCCAGAGCCCTGGAGGAGG--TTAACTC-CCTGGTCCTTGTACAGAGCAAATCTGTCGTAGTCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCATGCGCCACGACG i calJac3.chr22 C 0 C 0 s mm10.chr7 3716691 159 + 145441459 ACATAGCCCAGTGTGAAGTTGGCC-ACAGAGAAGCCAGTGTCAGTCTG--CTGGCTAGAGTGCTGCATGATG--TCAGCTC-CCCCCACCTTGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGAAACACTGCAGGGTGAGGGTCATTCCAGGGTCCAGGATA i mm10.chr7 C 0 C 0 s canFam3.chr1 19704942 159 - 122678785 ACTGGGCCCAGGGGGAAGTCTGCC-CCAGAGAGCCCAGCCTGGGACTG--CCAGCCATGACGATGAAGAAGG--TCACGTG-CCCCCTCCTTGGACAGAACGAATCTGTCATAGCTGACATCAGAGAGACACTGGAGGGTCAGATTCTGTCCAGAGGTCACAACA i canFam3.chr1 C 0 C 0 a score=371571.000000 s hg38.chr19_GL949753v2_alt 216075 133 + 796479 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAGGAGCCA-GGACTGAGA-GGGCTGGTTCCTCCCACGCCCCTTCCTTCTCCCGTCCTGGCCCTGCAGGTCTCACTGTCTCTCA s panTro4.chr19 59149320 134 + 63644993 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAAGAGTCG-AGACTCCGAGGGGCTGGTTCCTCCCATGCCCCTTCCTTCTCCCGTCCTGGCCCTGCAGGTCTCACTGTCTGTCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777300 134 - 106955855 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAGGAGCTG-GGACTCCGAGGGGCTGGTTCCTCCCACGCCCCTTCCTTCTCCAGTCCTGGCCCTGCAGGTCTCACTGTCTCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065392 133 + 64156825 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAGGAGCTG-GGACTCAGA-GGGCTGGTTCCTCCCACGCCTGTTCCTTCTCCCGTCCTGGCCCTGCAGGTCTCACTGTCTCTCA i rheMac3.chr19 C 0 I 185 s macFas5.chr19 55119167 132 + 59248254 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAGGAGTTG-GAACTTGGA-GGGCTGGTTCCTCCC-CGCTTCTTCCTTCTCCTGTCCTGGCCCTGCAGGTCTCACTGTCTCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189492 130 + 51301725 GGGCCCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACATACCTGGAGGGAAAGAGGAGCCG-GGACTCAGA-GAGCTGGTTCCTCCCACGCCCCTTCCTTCT---GTCCTGGCCCTGCAGGTCTCACTGTCTCTCG i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46921018 133 + 50890351 GGGCTCTGCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAGGAGCCG-GGACTCAGA-GAGCTGGTTCCTCCCACGCCTGTTCCTTCTCCTGTCCTGGCCCTGCAGGTCTCACTGTCTCTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45479929 133 + 49145316 GGGCCCTGCGGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGGGGAGCGG-GGACTCGGA-TGGCTGGTTCCTCCCATGCCCCTTCCTTCTCCTGTCCTGGCCCTGCAGGTCTCAGTGTCTCTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3716850 125 + 145441459 TGGCCTTGGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCT-AGAGACTGA-GGTTTGGTTCTTACCAAACACCTTTGCCCTCCTCTCCTGCCTTTGTGCATGTCCCC-------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19705101 126 - 122678785 GGGCTCTGCTGGATCCGGAGGGAGGGCTTCCCCAACACACCT---GGGAAAGACCAGCCGTGGATTGTAG-GGGCTGATTACCTCAA---ACCTCCCTTCTCCTGTCCTAATCCC-CAGGTCTTA-TGTCCCTCA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56011180 501 + 60714840 I a score=250422.000000 s hg38.chr19_GL949753v2_alt 216208 180 + 796479 TGCTCTGAGTCTCTGACCCCAGGGCCTCCTTCTCACCCGGGGCTGTCTTGGAGTCATTTCAGAGGAGTGGGGTCTCCCT-AGCCCTGGCCACTGTGCCTGATCTTTCCTCCTCTCCCTGAGAGCTGGGACCTCACAGCAAACACACCGATGCCTTCCTGAGTCCTCCCCGTTCAGGTGAGC s panTro4.chr19 59149454 180 + 63644993 CACTCTGAATCTCTGACTCCAGGGCCTCCTTCTCACCCGGGGCTGTCTTGGAGTCATTTCAGAGGAGTGGGGTCTCCCT-AGCCCTGGCCACTGTGCCTGATCTTTCTTCCTCTCCCTGAGAGCTGGGACTTCACAGCAAACACACCGATGCCTTCCTGAGTCCTCCCCTTCCAGCTGAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777434 180 - 106955855 CACTCTGGGTCTCTGACCCCAGTGCCTCCTTCTCACCCAGGGCTGTCTTGGAGTCATTTCAGAGGAGTGGGGTCTCCCT-AGCCCTGGCCACTGTGCCTGATCTTTCCTCCTGTCCCTGAGAGCCGGGACCTCACAGCAAACACACCGGCGCCTTCCTGAGTTGTCCCCTTCCAGGTGAGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119299 170 + 59248254 CACTCTGAGTCTCTGACCCCAGGGCCTCTTTCTCA----------CCTTGGAGTCATTTCCGAGGAGTGGGGTCTCCCT-AGCCCTGGCCCCTGTGCCTGATCCTTCCTCCTCTCCCTGAGAGCCGGGACCTCACAGCAAACACACCGGTGCCTTCCGGAGTCCTCCCCTTCCAGGTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189624 180 + 51301725 CACTCTGAGTCTCTGACCCCAGGGCCTCCTTCTCATCCGGGGCTGCCTTGGAGTCATTTCCGAGGAGTGGGGTCTCCCT-AGCCCTGGCCACTGtgcctgatccttcctcctctccctgagAGCCGGGACCTCACAGCAAACACACTGGTGCCTTCCTGAGTCCTCCCCTTCCAGGTGAGG i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46921151 177 + 50890351 --TTCTGAGTCTCTGACCCCAGGGCCTCCTTCTCA-CCCGGGCTATCTTGGAGTCATTTCCGAGGAGTGGGGTCTCCCT-AGCCCTGGCCCCTGTGCCTGATCCTTCCTCCTCTCCCTGGGAGCCGGGACCTCACAGCAAACACACCGGTGCCTTCCGGAGTCCTCCCCTTCCAGGTGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480062 178 + 49145316 CACCCTGTGTCTTGGACCCCAGGG-CTCCTTCTCA-CCTGGGCTGTCCTGGAGCCACTTCAGAGGAGTGGGGTCTCCCTGAGCTTTCGCCGCTGTGCCTGAGCTTCCCCCCTCCCCCTGAGAGCCAGGAACTCACAGCAAACACACTGGAGCCTTCCTCAGTC-TCCCCTTCCAGGTGAGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3716975 86 + 145441459 ------------------------TCTTCTCCCCAGTCAGGGCAGT----------GTTCAAGAACACAGGCTCTCCAT----------------------TTTTTCCTTCTCTACCTGCAA----------CTCAGCAGAGGGGCAG--GCCT--------------------------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19705227 77 - 122678785 CCCTTGGAGTCTCTGACC-------------------------------------------------TGTGACCCCTGT-GGTCC-----------CCTGACCCACCCTC--------------------------------ACATCTGGGGCTTCCCTGGT-----------AGGTTGGC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56011180 501 + 60714840 I e rheMac3.chr19 60065525 185 + 64156825 I a score=41692.000000 s hg38.chr19_GL949753v2_alt 216388 34 + 796479 GTGGCTGAGGGCTCCTCCTCCCATGTCAGAGCCT s panTro4.chr19 59149634 34 + 63644993 GTGGCTGAGGGCTCCTCCTCCCATGTCAGAGCCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777614 18 - 106955855 GTGG----------------CCGTGTCAGAGCCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119469 34 + 59248254 GTGGCCGAGGCCTCCTCCTCCCATGTCAGAGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189804 34 + 51301725 GTGGCCGAGGCCGCCTCCTCCCATGTCAGAGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921328 34 + 50890351 GTGGCCGAGGCCTCCTCCTCCCACGTCAGAGCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480240 31 + 49145316 GT-ACCGAGGGCTCCTCCTCCCATGTC--AGTCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3717061 21 + 145441459 GTGGCAAAGGAC-------------TTAGGGCCT i mm10.chr7 C 0 C 0 e canFam3.chr1 19705304 0 - 122678785 C e ponAbe2.chr19 56011180 501 + 60714840 I e rheMac3.chr19 60065525 185 + 64156825 I a score=149434.000000 s hg38.chr19_GL949753v2_alt 216422 84 + 796479 CCCCATGGGGTCTCCCTCATGCCTTCAGCCCGTCCTTCAACACATCACTCTGGGTCCTTTCCAGATTCAGTCACCAGCCAAACT s panTro4.chr19 59149668 84 + 63644993 CCCCATGGGGTCTCCCTCACGCCTTCAGCCCGTCCATCAACACATCACTCTGGGTCCTTTCCAGATTCAGTCACGAGCCAAACT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777632 84 - 106955855 CCCCATGGGGTCTCCCTCACGCCTTCAGCCTGTCCATCAACACATCACTCTGAGTCCTTTCCAGATTCAGTCACCAGCCAAACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119503 84 + 59248254 CCCCATGGGGTCTCCCTCACGCCTGCAGCCCGTCCGTCCACACATCACTCTGGGTCCTTTCCAGAGTCAGTCACCAGCCAGACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189838 84 + 51301725 CCCCATGGGGTCTCCCTCACGCCTGCAGCCCGTCCATTCACACATCACTCTGGGTCCTTTCCAGAGTCAGTCACCAGCCAGACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921362 84 + 50890351 CCCCATGGGGTCTCCCTCACGCCTGCAGCCCGTCCATCCACACATCACTCTGGGTCCTTTCCAGACTCAGTCACCAGCCAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480271 84 + 49145316 CCCCATGGGGCCTCCCTCACGCCTTCAGCCTGTCCATCAACACATCACTCTGGGTCCTCTCCATCTTCAGTCACTAGCCAAACT i calJac3.chr22 C 0 C 0 e mm10.chr7 3717082 0 + 145441459 C e canFam3.chr1 19705304 0 - 122678785 C e ponAbe2.chr19 56011180 501 + 60714840 I e rheMac3.chr19 60065525 185 + 64156825 I a score=37298.000000 s hg38.chr19_GL949753v2_alt 216506 21 + 796479 CCCCACAACCTGTCAGCTGCC s panTro4.chr19 59149752 21 + 63644993 CCCCACAACCTGTCAGCTGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777716 21 - 106955855 CCCCACAACCTGTCAGCTGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119587 21 + 59248254 CCCCACAGGCTGTCAGCTGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189922 20 + 51301725 CCCCA-AGCCTGTCAGCTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921446 21 + 50890351 CCCCACAGCCTGTCAGCTGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480355 18 + 49145316 CCC---AGCCTGTCTGCTGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705304 21 - 122678785 CCCTGAAACTTGTCTGGTGCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3717082 0 + 145441459 C e ponAbe2.chr19 56011180 501 + 60714840 I e rheMac3.chr19 60065525 185 + 64156825 I a score=224119.000000 s hg38.chr19_GL949753v2_alt 216527 106 + 796479 -CCGAAAGTGTGTTAGACAA-GGCCGTGGCTCCCTCACCTGAGGGCAGAATCTCCAGGGGGTCACTGGGGTGGGACCACACCCGGGGGGTGTTCATATAATAGTAATA s panTro4.chr19 59149773 106 + 63644993 -CCGAAAGTGTGTTAGAGAA-GGCCGTGGCTCCCTCACCTGAGGGCAGAATCTCCAGGGGGTCACTGGGGTGGGACCACACCTGGGGGGTGTTCCTGTAGGATCCATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777737 106 - 106955855 -CCGAAAGTGTATTAGAGAA-GGCCGTGGCTCCCTCACCTGAGGCCAGAATCTCCAGGGGGTCACTGGGCTGGGACCACACCTGGGGGGTGCTCCTATAATAGTAATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119608 105 + 59248254 -CCGAAAGTGGATTAGAGAA-GGCCGTGG-TCCCTCACCTGAGGCCAGAATCTCCAGGGGGTCACTGGGGTGGGACCACACCTGGGGGGTGTCCCTATAATAGTAATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47189942 105 + 51301725 -CCGAAAGTGGATTAGAGAA-GGCCGTGG-TCCCTCACCTGAGGCCAGAATCTCCAGGGGGTCACTGGGGTGGGACCACACCTGGGGGGTGTTCCTGTAGTATCCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921467 105 + 50890351 -CCGAAAGTGGATTAGAGAA-GGCCGTGG-TCCCTCACCTGAGGCCAGAATCTCCAGGGGGTCACTGGGGTGGGACCACACCTGGGAGGTGTTGCTGTAGTATCCATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480373 105 + 49145316 -CCAAAAGTGTGTTAGAGAA--ACCGTGGCTTCCTTACCTGAGCTCAGAATCTCCAGGGGGTCACTGGGGTGTGACCACACCTGGGGGGTGTTTCTATAATAGTAATA i calJac3.chr22 C 0 C 0 s mm10.chr7 3717082 105 + 145441459 -CAGAAAATGT-TTGGAGAATGATAGTGG-GGACTTACCTGAGATGAGTATTTGTTGGAGAGCACTAGGTACTGACCACAGCTGTGGGGCATTCTTGTAGTAACCGTA i mm10.chr7 C 0 C 0 s canFam3.chr1 19705325 107 - 122678785 TCAAACCATGGATGGGATGA-AAACCAGGCTTTCTCACCTGAGATCAACAGCTCCAAGGGGTCACTGGGGAGTGACCACTCCTGGGGGGTGTTGCTGTAATAACCATA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56011180 501 + 60714840 I e rheMac3.chr19 60065525 185 + 64156825 I a score=405980.000000 s hg38.chr19_GL949753v2_alt 216633 155 + 796479 GCATGTGAACCTCCACCTGTGGCTGGGGTTCACGGGGCCCACAGGGAACAGGGCCTGGAACCCCCCACTGTGGAGC---TGCTGTGAGTCCAGGGTCCGGGGGAGCTGGTGTTCT--CCTTCCTTCATCAGAACAAAATGGTGATATCCCTTCTGTGAGC s panTro4.chr19 59149879 155 + 63644993 GCATGTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACCCCCCACTGTGGAGG---TGCTGTGAGTCCAGGGTCTGGGGGAGCTGGTGTTCT--CCTTCCTTCATCAGAACAAAATGGTCATATCCCTTCTGTGAGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102777843 155 - 106955855 GCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACCACCCACTGTGGAGC---CGCTGTGAGTCCAGGGTCCGGGGGAGCTGGTGTTCT--CCTTCCTTCACCAGAACAAAATGGTCATATCCCTTCTGTGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065710 155 + 64156825 GCATCTGAACATCCACCGGTGACTGGGGGCCACAGGGCCCACAGGGAACAGGGCCAGGAACAGCCCGTTGGAGAGT---TCCTGTGAGTCCAGCATCCAGGAGAGCTTGTTTTCT--CCTTCCTCAATCAAAATGAACCTCTGAAATCCCAGCCTTGAGC i rheMac3.chr19 I 185 C 0 s macFas5.chr19 55119713 155 + 59248254 GCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGTACCACCCACTGTGGAGC---TGCTGTGAGTCCAGGGTCCGGGGGAGCCTGTGTTCT--CCTTCCTCAATCAGAACAAAATGGTGATATCCCCGCTGTGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47190047 155 + 51301725 GCATCTGAACGTCCACCTGTGGCTGGTGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGTGGAGC---TGCTGTGAGTCCAGGATCCGGGAGAGCCTGTGTTCT--CCTTCCTCAATCAGAACAAAATGCTGATATTCACCCTGTGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921572 155 + 50890351 GCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGTACCACCCACTGTGGAGC---TGCTGTGAGTCCAGGGTCCGGGGGAGCCTGTGTTCT--CCTTCCTCAATCAGAACAAAATGCTGATATCCCTGCTGTGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480478 152 + 49145316 GCATCTGAACATCCACCTGTGGCTGGGGGTCACGGGACCCACCGGGAACAGGGCCCTGAA---CCCACTGGGGGGC---TGCTGTGAGTTCAGGGTCCGGGGGAGCTGGTGTTCT--CCTTCCTTCATCAGAACAAAATGGAAATATCCCTCCTGTGAGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3717187 155 + 145441459 ACATCTGAATGCCCCTGTATGGGTTGGGGTTGTGGGTCCTATAATAAACAGGGCTCGGTACTGTCCACTAGAAGATATATGCTCTGTGTCCAGT-----GAGTTGCCGAATTTCTTATCTTCCTTGGTGAGAATGAATTTATCGTAGGGAAAGTCTGAGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19705432 155 - 122678785 GCATCTGAATGTCCACATGAGGCTGGGGATCACAGGCCCCACAGGGAACAGGGCCCAGAACCTCATACTAGGTGCT---TGCTGGGAGTTCCGGGTCCAGAACAGCTGGCGTTGT--CCTTCTTTCATCAGGACGAACCTGTGGAATCCTGTCCATGATA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56011180 501 + 60714840 I a score=1313923.000000 s hg38.chr19_GL949753v2_alt 216788 361 + 796479 CACATTGGAGGGTCATATTCCCCCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTA------TAGGCTCCTAGGAGAGAAAGAGGCACCATGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACACCCCTGAGAGCCGA-CCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAGAGTGTCCTCTCACCTGTCATCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGAGCTGTAATAGTGGCAGCGGTATCTCCCCGCATGGTGCTCTGTTATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGTTCCAGTGG s panTro4.chr19 59150034 361 + 63644993 CACATCGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTGTGCTG------TAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACACCCCTGAGAGCCGA-CCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGCGATAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCATTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56011681 357 + 60714840 CACACTGGAGGATCACCTTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTTGCTG------TAGGCTCCTAGAAGAGAAGGAGGCACCATGTTAAATGGGGCTCACA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACACCCCTGAGAG-----CCTCCTTCTTGAGGGCAGAGCCTGGGGCTGGGACTCCTGAGTGTCCTCTCACCTGTCATCACCAGCTCCAGGGGGTCACTGGGCTCTGACCACCGAGTGCGGCTGTAATACTGACAGCGATACCGCCCTGTGTGTTCCCAGGAGATGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCTAGTCG i ponAbe2.chr19 I 501 I 11 s nomLeu3.chr10 102777998 361 - 106955855 CACACTGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTG------TAGGATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACGCCCCTGACAGCCGA-CCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACGAGCTCCAGGGGGTCGCTGGGCTCCGACCAGCCTGCAGAGCTGCGATAGTAACAGCGGTATCTCCCTGCGTGGCGCTCTGTCATGGATGGGATGGAGAATCTGGCCTTGCTCCTGGGTTCCAGTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60065865 363 + 64156825 TACACTGGATGGTCACGTTCTCTCCTGAGGTCACCACAGGGCTCGGCAAGGCTGAGAGGGTGGGTTCTCTG------TAGGCTCCTAGGAAAGAAGGAGACACTGTCTTAAATGGGACTCATG-CCTCCCACATCATCCCCCAGGGCTGAGTTATTAGAACGAAGATGCCCCTGAGAGCTGA-CCTCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTTACCTGTCACCACCAGTTCCAGCGGGTCACTGAGCTCTGACCAGCCTGCAGAGCTGAGATAGTGACAGCGGTATGTCCCTGCATAGTGCTCTCTCATGGATGGGATGAAGAAGTTGGTCTTGTTCCTGGGCTCTGGTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55119868 361 + 59248254 CACATTGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTG------TAGAATCCTAGGAGAGAAGGAGGCACCGTGTTTAATGGG-CTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGTTGTGAGAG-GGAGACGCCCCTGAGAGCCGACCCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGCGCTCTGACCAGCCCGTAGGGCTGTAATAGTGACAGCGAAATCTCCCTGCATGGCGCTCTGTCATGGATGGGGTGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47190202 360 + 51301725 CACATCGGAGGGTCACGTTCCCTCCTGAGGCCAccacagggctgggcagggctgagaGGGTGGGTTTGTTG------TAGAGTCCTAGGAGAGAAGGGGGCACCGTGTTAAATGGG-CTCCCA-CCTTCCACATCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGATGCCCCTGAGAGCCGA-CTCCCTTCCTGAGGACACAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGCGCTCTGACCAGTCTTCAGGGCTGTGATAGTAACAGCGGTATCTCCCTGCATGGCGCTCTGTCATGTATAGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46921727 360 + 50890351 CACATCGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTG------TAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTTAATGGG-CTCCCA-CCTCCCGCAGCAT-CCCCAGGGCTGGGCTGTGAGAG-GGAGACGTCCCTGAGAGCCGA-CCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGTGCTCTGACCAGCCTTCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCCTGGTACTCTGTCATGGATGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480630 357 + 49145316 CACACTGGAGGGTCACGTTCCCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTAAGAGGGTGGGTTTGCTG------TAGACTCCTAGGAGAGAAGGAAGCACCATGTGAAATGGGGCTCACA-CCTCCCACATCAC-CCCCAGGCCTGGGCTGGGAGAG-GGAGATGTCCCTGAGAGCCAA-CCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGAC-CCTGAGTGTCCTCTCACCCGTCACCACCAGCTCCAGGGGCTCACTGCGCTCTGACCAGCCTGCAGGGCTGAGATAGTAACAGCGATATTTCCCTGCATGGGACTCTGACATGGATGAGATGGAGAATCTGGCCTTGTT---GGGTTGCAGTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3717342 345 + 145441459 CACAGTGGAGTGTCATGTTCCCTCCAGCTGTCACCACAGGGCTGGGCAGTACTGACAGCCTGGGTTCATAGTATTCATAGATTCCTAGGAGAGAAGGAGGCTGTCTGTTACATGTT-CTCACA-CCATCCCAGTGTT-CTCTTGGGATACTCTGTGGGAA-GGAA--------------TAA-------TCCTGAGAGCAGAGCCTGGGGTTGAGAA-TCTGACTGTCCCCTCACCTGTCACCACCAGCTCCAGGGTGTCACTGGGCTGTGACCAACCAGCTGAGCCGTAACAATAACAGCGATATTGCCCTGCATGTTGTAGTGTCACAGAAGGGATGAAGAACTTGCCCTTGTTCCCAGGCTCCTGTAG i mm10.chr7 C 0 C 0 s canFam3.chr1 19705587 358 - 122678785 CACACTGGAGGGTCACATTCCCTCCTGAGGGCACGATAGAGCTGGGCAGGACTGAGAGGCTGGGTTTGCTG------TGCATCCCTAGGAGAG-GGGAGGGGCTGTGTTACATGGGGCTCAGATCCCCCCACATGAT-CCCCAGGGATGGGCTGTGAGAG-GGCGACAT-CCTGAGAGCAGA-CCCTCTTCCTGAGGGCATAGCCTGGGCTGGAGA--CCTGAGTGGGCTCACACCTGTCACCACCAGCTCCAGGGGGTCACTGGGATTAGACCAGGCAGTGGTGATTCTATAGTAACAGTGATATTGTCCTGCATGTACATCTGTCATGTGTGTGATGGAGAACTTGGCCTTGTCCTTGAACTCCAGTTC i canFam3.chr1 C 0 C 0 a score=21143.000000 s hg38.chr19_GL949753v2_alt 217149 11 + 796479 GTTATTTCTGT s panTro4.chr19 59150395 11 + 63644993 GTTCTGTGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102778359 11 - 106955855 GTTCTGTGTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066228 11 + 64156825 GCTCTGTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55120229 11 + 59248254 TTTCTGTGTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47190562 11 + 51301725 TTTCTGTCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46922087 11 + 50890351 TTTCTGTCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480987 11 + 49145316 GTTCTGTCTGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3717687 11 + 145441459 GGTCTGTGTGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19705945 11 - 122678785 AGGCTGTCTGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56012038 11 + 60714840 I a score=257063.000000 s hg38.chr19_GL949753v2_alt 217160 79 + 796479 CCCAGGGCTCTGGGCTTCCCTCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGCTCCCCTGACACCAGATGGTCACGGG s panTro4.chr19 59150406 79 + 63644993 CGCGTGGTTCTCGGCTTCCCTCTTTATACAGACGGTACTCCTGGGCCTCCAGGCTCCCCTGACACCAGATGGTCACGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012049 79 + 60714840 TCCAGGATGCTGATTTTTTCTCCCTATATAGATGGTACTCCTGGGCTTCAAGGCTCCCCTGACACCTGAGGGTCACGGG i ponAbe2.chr19 I 11 C 0 s nomLeu3.chr10 102778370 79 - 106955855 CCTGGGGTTCTTGGCTTCCCTCTTTATCCATAAGGTACTCCTGGGCCTCCATGGTCCCCTGACACCAGATGGTCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066239 79 + 64156825 GCCAGGTCATGGTGCTTCCTTCCTTGGTGAGATGGTAACCCTGGGTATCCAGGGTCCCCTGGCACCAGAGGGTCACGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55120240 79 + 59248254 CCCAGGGCTCTGGGATTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCCGACACCAGATGGTCACGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47190573 79 + 51301725 CCCAGGGATCTGTACTTCCCTCTTTATGCAGACGGtactcctgggcctccagggtCCCCTGACACCAGATGGTCACGGG i papAnu2.chr19 C 0 M 270 s chlSab2.chr6 46922098 79 + 50890351 CCCAGGGCTCTGTGCTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGTTCCCCCGACACCAGATGGTCACGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45480998 79 + 49145316 CCCAGGCTACTTGGATTCCCTCTTTTTCCAGATGATACTCCTGGGCCTCCAGGTTCCCCTGACACCAAATGGTCACGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3717698 79 + 145441459 TCTGTGTTTTTTGGCTTTTCTCATTATGCAGAAAATATACTTCTGCATCCAGGTTCCCCTGACACCAGATGGTCATTGC i mm10.chr7 C 0 C 0 s canFam3.chr1 19705956 79 - 122678785 TCCAGGTCCCTGAGTATCTTTCTTTATACAGGAGGTACTCTTGGGCCTTCAGGCTCCCCTGACACCAGATGGTCACAGG i canFam3.chr1 C 0 C 0 a score=172026.000000 s hg38.chr19_GL949753v2_alt 217239 53 + 796479 GCTCCCCCAGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGA s panTro4.chr19 59150485 53 + 63644993 GCTTCTCCAGCTGATCACAGATCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012128 53 + 60714840 ACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGGGTGGGCTTGGGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102778449 53 - 106955855 GCTCTCCCGGATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066318 53 + 64156825 GCTCCCCCAGCTGATCACAGAGCCTGGCTCAGCCCAGAGGCTGGGTTTGGGGA i rheMac3.chr19 C 0 I 190 s macFas5.chr19 55120319 53 + 59248254 GCTCCCCCAGATGATCACAGAGCCAGGCTCAGCCCAGAGGGTGGGTTTGGGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922177 53 + 50890351 GCTCCCCCGGATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481077 53 + 49145316 GCTCCCCCAGATGATCACAGAGGCTGGCTCAGCCCAGAGGATGGGTGTGGGGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3717777 53 + 145441459 TCTTTTGGAGGTGATCACAGATCCTGGTTCAGCCTTGATGGTTGGTTTTTGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19706035 53 - 122678785 TGCCTCCCAGGGGACCACAGAGCCTGGCTCAGCCCAGATGGTGGGTTTGGGGA i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M a score=50630.000000 s hg38.chr19_GL949753v2_alt 217292 23 + 796479 AGGGCCCTAGATGGAAATCAGAG s panTro4.chr19 59150538 21 + 63644993 GGGGCCCTGGAAGGAAATC--AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012181 23 + 60714840 GGGGCCCTGAAAGGAAATCAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102778502 23 - 106955855 GGGGCCCTGGAAGGAATTCAGAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120372 23 + 59248254 GGGGCCCTGGAAGGAAATCAGAA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922230 23 + 50890351 GGGGCCCTGGAAGGAAATCAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481130 23 + 49145316 GGGGCCCTGGAAGGAAATCAGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3717830 23 + 145441459 GATTACCTACATAGAAATCAGAG i mm10.chr7 C 0 I 2085 s canFam3.chr1 19706088 22 - 122678785 GGGTCCCTGGAAGGAAA-CAGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066371 190 + 64156825 I a score=28395.000000 s hg38.chr19_GL949753v2_alt 217315 16 + 796479 GCTGGATCCCAAGACA- s panTro4.chr19 59150559 16 + 63644993 GCTGGATCCCAAGACG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012204 16 + 60714840 GTCAGATTCTAAGTCA- i ponAbe2.chr19 C 0 I 105 s nomLeu3.chr10 102778525 16 - 106955855 GCTGGATCCCAAGACG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120395 16 + 59248254 GCTGGATCCCAAGACG- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922253 16 + 50890351 TCTGGATCCCAAGACG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481153 16 + 49145316 GCTGGATCCCAAGACC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3719938 16 + 145441459 ACTAGGACTCAGGACA- i mm10.chr7 I 2085 C 0 s canFam3.chr1 19706110 17 - 122678785 GCTGCGTCACAAGACCC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066371 190 + 64156825 I a score=115179.000000 s hg38.chr19_GL949753v2_alt 217331 123 + 796479 TCC--CCACGCTCAG-ATCCCAGCTCCCAGCCCCAGGACTTCCTCATCATCCCCATCAGTCACCCAGAACTACTGTCTCCTCCCCA-CCCAGAACTGCTGTCTCCTCCCCCAGCTGCCC-ATGTGTGG s panTro4.chr19 59150575 99 + 63644993 TCC--CCATACTCAG-ATCCCAGCTCCCAGCCCCTGGACCCTCTCGTCATCGCCATTAGT------------------------CA-CCCAGAACTGCTCTCTCTTCCCCCAGCTGCCC-ATGTGTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102778541 98 - 106955855 TCC--CCACACTCAG-ATCCCAGCTCTCAG-CCCAGGACCCCCCCGTCATCCTCATAAGT------------------------CA-CCCAGAACTGCTGTCCCCTCCCCCAGCTGCCC-ATGTGTGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120411 98 + 59248254 TTC--CCACACTCAG-ATCCCAGCTCCCAGCCCCAGGACCCCC-CGTCATCGCCATCAGT------------------------CA-CCCAGAACTGCAGTCTCTTCCCCCAGCTGCCC-ATGGGTGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922269 98 + 50890351 TCC--CCACACTCAG-ATCCCAGCTCCCAGCCCCAGGACCCCC-CGTCATCACCATCAGT------------------------CA-CCCAGAACTGCAGTCTCCTCCCCCAGCTGCCC-ATGTGTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481169 101 + 49145316 TCCATCAGCCCTCAG-ATCCCAGCTCTCAGCTCCAGGATGCCCCCGTCATCCCCATCAGC------------------------CA-CCCAGAACTGCTGTCTCCACCTCCAGCTGCCC-AGGGGTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3719954 97 + 145441459 ----AACACACTCAG-ATTGCAGTCCTTAACCCCATGGCCTTCCTGCCACCCACAGGACT------------------------CA-CACACAGGTGGTGTTTTCCACCATCACAGCCC-AGGCATGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19706127 87 - 122678785 TTC--CCACCCCCAATATCCAAACCCCCAG-AGGGGGACCCTCTC--------------T------------------------CAGCCCAGAGCTGCTGATCTCCTTCCTCCCTGCCTGGTGGGTGT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56012220 105 + 60714840 I e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066371 190 + 64156825 I a score=173029.000000 s hg38.chr19_GL949753v2_alt 217454 73 + 796479 CCCTTGTCCCTAGTAAGGATGAGGGACC----TGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGG s panTro4.chr19 59150674 73 + 63644993 CCCTTGTCCCTAGTGAGGAGGAGGGACC----TGGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012325 73 + 60714840 CCCTTGTCCCCAGTGAGGAGGAGGGACC----TGGGACAGCTGGGGACAGACTTACCTGCCTGCACGTGGGTCCTGG i ponAbe2.chr19 I 105 C 0 s nomLeu3.chr10 102778639 73 - 106955855 CCCTTGTCCCTAGTGTGGAGGAGGGACC----TGGGACAGCTGGGGACAGACTCACCTGCCTGGGTGTGGGTCCTGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120509 73 + 59248254 CCCCTGTCCTTAGTGAGGAGGAGGGACC----TGGGACAGCTGGGGACACACTCACCTGCCTGCACGTGGGTCCTGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922367 73 + 50890351 CCCCTGTCCCTAGTGAGGAGGAGGGACC----TGGGACAGCTGGGGACAGACTCACCTGCCTGCACGCGGGTCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481270 73 + 49145316 GCCTTGTCTCTAGAGAGGAAGAGAAACC----TGGGACAGCTGGGGACAGACTTACCTGCCTGCACGCGGGTTCTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3720051 72 + 145441459 -----CTCCTGGATATGAAGAAAAGAGCATTTCAGGTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19706214 72 - 122678785 TCTCTGTCCCCAGTGAGGAGGTGGGAG-----TGGGATCCCTGGGGACAGACTCACCTGCCTGCACTTGGGTCCTGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066371 190 + 64156825 I a score=144649.000000 s hg38.chr19_GL949753v2_alt 217527 44 + 796479 GGCCCAGACTCAGCCCTGGAAGAGAATTCCCTGTGAGGCATTTG s panTro4.chr19 59150747 44 + 63644993 GGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGCATTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012398 44 + 60714840 GGCCCAGACTCAGCCCTGGAAGAGAGTTTCTTGTGAAAGATTTG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102778712 44 - 106955855 GGCCCAGACTCAGCCCTGGAAGAGAATTCCCTGTGAGGGATTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066561 44 + 64156825 GGCCCAGACTCAGCCATGGAGGAGAGTTTCCTGTGGGGGATTTG i rheMac3.chr19 I 190 I 164 s macFas5.chr19 55120582 44 + 59248254 TGTCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAAGGATTTG i macFas5.chr19 C 0 I 1 s chlSab2.chr6 46922440 42 + 50890351 GGCCCAGACTCAGCCCTGGAAGAGAGTTCCCAGTGA--GATTTG i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45481343 44 + 49145316 GGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTG i calJac3.chr22 C 0 I 1 s mm10.chr7 3720123 44 + 145441459 GGCTCAGAGTCAGTCCTGGAAGAGAGTTCTTTGTAAGAGATTTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19706286 43 - 122678785 AGCCCACACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M a score=62995.000000 s hg38.chr19_GL949753v2_alt 217571 40 + 796479 CCCTGAAGCCTGAGCAGG--TCCTCCCCGCCCTGGTGCCTCC s panTro4.chr19 59150791 37 + 63644993 CCCTGAAGCCTGAGCAGG-----TCCCCACCCTGGTGCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012443 40 + 60714840 CCCTGAAGCCTGAGCAGG--TCCTCCCCTCCCTGGGATCTTT i ponAbe2.chr19 I 1 I 69 s nomLeu3.chr10 102778756 37 - 106955855 CCCCGAAGCCTGAGCAGG-----TCCCCGCCCTGGTGCCTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120627 40 + 59248254 CCCTGAAGCCTGAGCAGA--CCCTCCTCACCCTGGTGCCTCC i macFas5.chr19 I 1 C 0 s chlSab2.chr6 46922483 40 + 50890351 CCCTGAAGCCTGAGCAGA--CCCTCCCTGCCCTGGTGCCTCC i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45481388 40 + 49145316 CTCTGAAGCTTGAGCAGA--TCCTCCCCTCCCTAGTGCCTCC i calJac3.chr22 I 1 C 0 s mm10.chr7 3720167 32 + 145441459 TCCCTAAGGCTGAGCAAG-----TCTGCA----GAAACATC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19706329 41 - 122678785 CCCCAAATCCTGAACAGAACCCCTCCTCTCCATGAGCCCCC- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066605 164 + 64156825 I a score=108121.000000 s hg38.chr19_GL949753v2_alt 217611 70 + 796479 TGAGCTTTTGAGGTCTCCTGATGGACCAGGGCTTGTGTGTGGGGTGGGGTTCCTCCAAGACTCAGATCTC s panTro4.chr19 59150828 70 + 63644993 TGAGCTTTTGAGGTCTCCTGATGGACCAGGGCTTATGTGTGGGATGGGGTCCCCCCAAGACTCAGATCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102778793 70 - 106955855 TGGGCTTTTGAGGTCTCCTGATGGACCAGGGCTTGTGTGTGGGGTGGGGTCCCTCCAAGACTCGGATCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120667 70 + 59248254 TGAGCTTTTGAGGTCTCCTGATGGACCAGGGCTTGTGTGTGGGGTGGGGTCCCTCCAAGACTCGGATCTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922523 70 + 50890351 TGAGGTTTTGAGGTCTCCTGATGGACCAGGGCTTGTGTGTGGGGTGGGGTCCCTTCAAGACTCGGATCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481428 69 + 49145316 TGAGCTTTTGAGGTCTCCTGATGGACCAGGGCTTGTGTGTGGGGTGGGGTCCCTCCAAGACTCAGATCT- i calJac3.chr22 C 0 C 0 s mm10.chr7 3720199 69 + 145441459 TGAGAACCTGGGGTTTCCTTTTGGGTGCGTGCTGGTCTACAGGCCATGATCATTTCCAGACCTCAGTAT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19706370 66 - 122678785 TGAGC--CTGGGATCT-CTGACAGGCCAGGGCCTGGCTGTGGGGCA-GGTCCCTCCCAGAGTAAGGCATT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56012483 69 + 60714840 I e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066605 164 + 64156825 I a score=21551.000000 s hg38.chr19_GL949753v2_alt 217681 10 + 796479 CCCCTCCCCA s panTro4.chr19 59150898 10 + 63644993 CCCCTCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012552 8 + 60714840 CCCCTCCC-- i ponAbe2.chr19 I 69 C 0 s nomLeu3.chr10 102778863 10 - 106955855 CCGCTCCCCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55120737 10 + 59248254 CCCCTCCCCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922593 10 + 50890351 CCCCTCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481497 10 + 49145316 CCTCTCCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3720268 10 + 145441459 CCCCTCCCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19706436 8 - 122678785 -CCCTCCCC- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M e rheMac3.chr19 60066605 164 + 64156825 I a score=216274.000000 s hg38.chr19_GL949753v2_alt 217691 76 + 796479 TCTTGAAATCTCACCTAGGCAGAGCAGGGCTGCGAGGGTGGGGGTCATGG-CGTCTCCTCCTGGTGACCCCGGGCTC s panTro4.chr19 59150908 76 + 63644993 TCTTGAAATCTCACCGAGGCAGAGCAGGGCTGTGAGGGCTGGGGTCATGG-CGTCTCCTCCCGGTGACCCCGGGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012560 73 + 60714840 TCTTCAAATCTCACCGAGACAGATCAGGACCATGAGGATGGGGGTCATGG-CGTCTTCTCCCACTGCCCT---GCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102778873 76 - 106955855 TCTTGAAATCTCACCGAGGCAGAGCAGGGCTGTGAGGGTGGGGGTCATGG-CGTCTCCTCCCAGTGACCCCGGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066769 73 + 64156825 TCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGATGGGGGTCATGG-CATCTCCTCCCACTGCCCT---GCTC i rheMac3.chr19 I 164 C 0 s macFas5.chr19 55120747 76 + 59248254 TCTGGAAATCTCACCGAGGCAGAGCAGGGCTGTGAGGGCGGGGGTCATGG-CGTCTGCTCCCAGTGACCCCGGGCTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46922603 76 + 50890351 TCTGGAAATCTCACCGAGGCAGAACAGGGCTGTGAGGGCGGGGGTCATGG-CGTCTCCTCCCAGTGGCCCCGGGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481507 76 + 49145316 TCTTGAAATCTCACCAAGGCAGAGCAGGGCTGTGAGGGTGGGGGTCATGG-CGTCGCTTCCCAGTGGCCACGGGCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3720278 75 + 145441459 TCTTCACATCTCACCAAGACGGAGCAGGGCTGTGAAGGTGCAGGACATGG-CATCTCCCCTCAGTGGCTGCA-ACTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19706444 75 - 122678785 TCCTTGGCTCTCACCTAGACAGAGCAGAACCGTGAGGGCGGGGGTCATGGCCGTCTCCTCTCTCTGGCCC--AGCTC i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47190652 270 + 51301725 M a score=706256.000000 s hg38.chr19_GL949753v2_alt 217767 245 + 796479 TGCAGAGGGATGAGCCCTCAG-----TGCTGGCAGGACAGAGAG--ACACACAGG-----------------------------GTGTGGCCGCTCGGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATCCTCAGCC-CACAGGAAGAGGAACTGCCA--CCCCAGGAACCTGGCTCTGATTTCCCCAGGGCTGAAGTGGGGGCAGGCACCAGGCTCTCTGCAGGCATTTCAGAGAGAAATGGGGTC-TCCCTGCCCCCGGGCCACTGTCTGCCTGATTTAT s panTro4.chr19 59150984 244 + 63644993 TGCAGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AGAG--ACACACAGG-----------------------------GTGTGGCTGCTCCGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACTGCCC-TCCCCAGGAGCCTGGCTCTCAGTTCCCCAGGGCTGAAGTGGGGGCAGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCTGCTCCCTGGCCACTGTCTGCCTGATCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012633 275 + 60714840 TGTGGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AGAG--ACACACAGAGAGAAATAGCCTCCCCTCCTTCCCACCCTGTGTGGACACTCGGAGGCTAGGTCCTTCTTGTCATGGGGTGTGGTCATCTGCAGCCACACAGGAAGCGGAACTGCCC-TCCCCAGGAGCCTGGCTCTCATTCCTTTAGGGCTGAGGTTGGGGCAGGCACCAGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGATCACCAGCCACTGTCTGTCTGGTATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102778949 246 - 106955855 TGCAGGTGGATGAGCCCTCGG-----TGCTGGCAGGACAGAGAG--ACACACAGG-----------------------------GTGTGGCCGCTCAGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATCCACAGCC-CACAGGAAGGGGAACTGCCC-TCCCCAGGAGCCTGGCTCTCATTTCCCCAGGGCTGAAGTGGGGGCGGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCTGCCCCCGGGCCACTGTCTGCCTGATTTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60066842 246 + 64156825 TGTAGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AGAG--ACACACAGG-----------------------------GTGTGGACACTCAGAGGCTGGGCCCTTCTTGTCAAGGGATTTTGTCATCTGCAGCCACACAGGAAGCGGAACTGCCC-TCCCCAGGAACCTGGCTGTCATTCCTTTAGGTCTGAGGTTGGGGCAGGCACCAGGCCCTCTGCAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACCGTCTGTCTGGCTTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55120823 246 + 59248254 TGCAGATGGATGAACCCTCGG-----TGCTGGCAGGAC--AGAGACACACACAGG-----------------------------GTGTGGCCGCTCGGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACTGCCC-TCCCCCAGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGGGCAGGCATCAGGCTCTCTGCAGACATTTCAGACAGAAATGGGGTC-TCCTTGTCCCTGGGCCACTGTCTGCCTGATTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47190922 246 + 51301725 TGCAGATGGATGAACCCTCGG-----TGCTGGCagaac--agagacacacacagg-----------------------------gtGTGGCCGCTCGGAGGCTGGGTCCTTCTTGTCATGGGATTGTCTCATCCTCAGCC-CACAGGAAGGGGAACCGCCC-TCCCCCGGAGCCTGGCTCTCATTTCCccagggctgaggtgggggcggGCACCAGGCTCTCTGCAGACATTTCAGacagaaatggggtc-tccctgtcCCTGGGCCACTGTCTGCCTGATTTAT i papAnu2.chr19 M 270 C 0 s chlSab2.chr6 46922679 244 + 50890351 TGCAGATGGATGAACCCTCGG-----TGCTGGCAGGAC--AGAG--ACACGCAGG-----------------------------GTGTGTCCGCTCAGAGGCTGGGTCCTTCTTGTTACGGGATTGTCTCATCCTCAGCC-CACAGGAAGGGGAACTGCTT-TCCCCCGGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGGGCGGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCTTGTCCCTGGGCCACTGTCTGCCAGATTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481583 241 + 49145316 TGCAGATGGATGAGCCCTTGG-----TGCTGGCAGGACAGGGAG--ACATCCAGG-----------------------------GTGTGGCTGCTCGGAGGCTGAGTGCTTCTTGTCATGGGGTTGTCTCATCCACAGCC-CACAGGAAGGGGAACTGCCC-TCCCCAGGAGCCTGGCTTTCATTTT----GGGCTGTGGTGGGGACGGGCACCCGCCTCTCTGCAGACATTACAAAGAGAAAT-GGGTC-TCCCTGCCCCAGGACCATTCTCTGTCTGATTTAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3720353 240 + 145441459 TGCTCAAGGGCAGAGCTACAGAGCCTTTCTGAAGGGAT--TGTG-----TACAGG-----------------------------GTGTGGC--ACTGGAGGCAGGGCAGTCCCCATGACATGGTCATAT-ATCAGCAGCCCCACAGAAAGAGGAACTGCCC-TCCTCAGCA-CCATGCTCTGACTTCCTCAATGGTGTGACTAGGCCAGGCAGTAGACCCTCTGCCATTAGTTCTTACACAGATGGCGTT-TCCTCATCCC---ACCAGTGTCTGCCTCACCTGT i mm10.chr7 C 0 T 6634 s canFam3.chr1 19706519 168 - 122678785 TAAAGATGGA-GGGACCTCGG-----TGCCTGCAGGACAGATAG--ACACACAGG-----------------------------GTGTGGCCACTCAGA-GCCCAGTCCTCACTGTCACGGGGTTATCACATCATCAGCCCCACAGGAAGGGGAACAGCCAGTCCCCAGAGGCCTAGC----------------------------CTGGCTCTGGTGTCTTTGAGGCCACTAC--------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=878526.000000 s hg38.chr19_GL949753v2_alt 218012 312 + 796479 CTTTATCTCACTGAGGACGGGGACACAGCCGCAAATAGACCTGGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGGTGACCGTGGGCTCCTCC---------TCCCTCTCAGAGCCTCCCC-ATGGGGTCTCCCTCCCTCCTTCAGCTCGTCCATCAGTTCAGCGTTACGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGACCCAGGTCCATGC--TGCAGGCAGACTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGTAGTCCAGGCTGAGCTGCGTGTAGCAGTGAGCACA---GAG s panTro4.chr19 59151228 315 + 63644993 CTTCATCTTACCGAGAGCCGGGACACAGCAGCAAATAGACCTGGTTCCTTCCAGAGTCAGCCCCTTTCAGGCGAGGGTGACTGTGGGCTCCTCC---------TCCCTCTCAGAGCCTCCCC-ATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATCAGCTCAGCATTACGGGGTCCTTACCATGGCGGTCGTCTCTCCAGCCCCGGAGGTGCTTCAGGGAAGACCCAGGTCCACGC--TGCAGGCAGACTCAGATCAGCAGAGACGCACCTGACTCCTGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56012908 309 + 60714840 CCTCGTCTCACTGAGAGCCgggatgtagcagcaaatagaactggtg-cttcctgtgtctg-cccttccagatgagggtaACGGAGGCTTCTCCT---------TCCTTCTCACAGCGTCCCC--CAAGGTCTCCCTCCCTCCTTCAGCCCATTCATCAGCTCAGCGTTGTGGGGCCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGACCCGGGTCCATGC--TGCAGGCAGACTCAGATCAGCAGAGAAGCATCTCGCATCTGGCTGTGCCATCCAGGCTGAGCTGCGTGTGGCAGTGCGCACA---GAG i ponAbe2.chr19 C 0 I 14595 s nomLeu3.chr10 102779195 306 - 106955855 CTTTATCTCACTGAGAGCCTGGACACAGCAGCAAATAGACCCAGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGATGA---------CCTCC---------TACCTCTCAGAGCCTCCCC-ATGGGGTCTCCCTCCCTCCTTCAGTCCGTCCATCAGCTCAGCGTTGTGGGGTCCTTTCCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGGAGGCTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCGGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067088 315 + 64156825 CTTCATCTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGATGCCTTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGACCGTGGGCTCCTCT---------TCCCTCTCAGAGCCTCCCC-ATGGGGTCTCCCTCCCTCCTCCAGCCCGTCCATCGGCTCAGCGTCGTGGGGTCCTTACCATGGCAGTCGTCTCTCCGGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55121069 324 + 59248254 CTTTATCTCACTGAGGGCCGGGACACAGCAGCAAATAGACCCGGTGCCTTCCTGAGTAAGCCCCTTTCAGGCGAGGGCGACCGTGGGCTCCTCTTCCCTCTCATCCCTCTCAGAGCCTCCCC-ATGGGGTCTCCCTCCCTCCTCCAGCCCGTCCATCGGCTCAGCGTCGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCGGGGAAGATGCAGGTCCACGC--TGCAGGCAGACCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAGTGAGAACACAGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47191168 315 + 51301725 CTTTATCTCACTGAGGGCCGGGACATAGCAGCAAATAGACCTGGTGACTTCCTGAGTCAGCCCCTTTCAGGCGAGGACGACCGCGGGctcctct---------tccctctcacagtctcctc-atggggtctccctccctcctccagcccgTCCATCGGCTCAGCGTCGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCGGGGAAGACGCAGGTCCATGC--TGCAGGCAGACTCAGGTCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGCACACAGGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46922923 315 + 50890351 CTTTATCTCACTGAGGGCCGGGACACAGCAGCAAACAGACCCGGTGACTTCCCCAGTCAGCCCCTTTCAGGCGAGGGCGACCATGGGCTCCTCT---------TCCCTCTCAGAGCCTCCCC-ATGGGGTTTCCCTCCCTCTTTCAGCCCGTCCATCGGCTCAGCATTTCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGC--TGCAGGCAGACCCAGGTCCGCAGAGACGCAACTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGCACACAGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45481824 308 + 49145316 CTTTATTTCATTGAGGGCTGGGACACAGCAGCACATAGCCCTGGTTCCTTCCTGAGTCAGCCCCTTTCAGGAGAGGGTGAGAGTGGGCTCCTCC---------TCCCTCTCACAGCCTCCTC-ATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATCAGCACAGAGGTGCAGGGTCCTCACTATGGCCATCGTCTCTCCAGCCCTGGAGTTGCTTCAGGGAAGATGCAGGTCCGTGC--TGCAGGCAGGCTCAGGTCAACAGAGACGCACCTGACACCTGGCTTTGCAGTCCAGGCTGAGCT-------GCCGTGAGCACAGAGGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706687 260 - 122678785 ---------------------------------AGTGGATCCCGAGGCTTCCTGAGAT-GTCCTGTCCTGGTGAGGA-GATCAGGGCATGTCCT---------TCCCTCCCAGAGCCTCCCCCATGGGGTCTCC--TCCATTTTCAGCACATCCCT--------------GGGGTCCTCACCATGGACGGGGTC-CTGAGGCC---GAGGTGCTGCTGGG--GACATGGGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGACAGATGTGTGACATCTCTGCGTAAGTCAGG-TGAGGTCACCGAGACAATGAGCCCTGAGGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T a score=29732.000000 s hg38.chr19_GL949753v2_alt 218324 9 + 796479 AAATGCAGG s panTro4.chr19 59151543 9 + 63644993 AAATGCAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779501 9 - 106955855 AAATGCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067403 9 + 64156825 AAATGCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55121393 9 + 59248254 AAATGCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47191483 9 + 51301725 AAATGCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46923238 9 + 50890351 AAATGCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45482132 9 + 49145316 AAATGCAGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706947 9 - 122678785 AAATACAGG i canFam3.chr1 C 0 I 232 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 56013217 14595 + 60714840 I a score=141209.000000 s hg38.chr19_GL949753v2_alt 218333 63 + 796479 GTCTACcgtggtggctcatgcctggaatcccagtacttcaggaggctgtggcgggt-gat-ggct s panTro4.chr19 59151552 64 + 63644993 GTCTACcgtggtggctcatgcctggaatcccagcatttcaggaggctgcggcagga-ggtgggct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779510 64 - 106955855 GTCCACcgtggtggctcatgcctggaatcccagcacttcaggaggctgaggcggga-ggcaggct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067412 63 + 64156825 GTCTACcgtggtggctcacgcctggaatcccagcacttcaggaggctgaggcgggt-gat-ggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55121402 63 + 59248254 GTCTACcgtggtggctcacgcctggaatcccagcacttcaggaggctgaggcgggt-gat-ggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47191492 63 + 51301725 GTCtaccgtggtggctcacgcctggaatcccagcacttcaggaggctgaggcgggt-gat-ggct i papAnu2.chr19 C 0 I 10612 s chlSab2.chr6 46923247 63 + 50890351 GTGTACcgtggtggctcaggcctggaatcccagcacttcaggaggctgaggcgggt-gat-ggct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45482141 64 + 49145316 CCCTGCcgtggtggctcccgcctggaatcccagcacttcaggaggctgaggcgggaggat-ggct i calJac3.chr22 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I a score=518973.000000 s hg38.chr19_GL949753v2_alt 218396 246 + 796479 tgaggccaggagcttcagacagtcctgggaaacagactgtgaccctgtttctacagaaaagaaaaaagtgagctgggcatggaggctcatgcctgtggtcccagctactcaggaggctgaggtgggaggatcacttgggcccgggaggcggaggcttcagggagctatgatcaccccttggccttccagcctgggcgacagagcaagatcctgtctaaaaaggagaaatagaggggataaagagaa---------- s panTro4.chr19 59151616 246 + 63644993 tgaggccaggagcttcagacagtcctggacaacatactttgaccctttctctacagaaaagaaaaaagtgagctgggcatggaggctcatgcctgttgtcccagctactcaggaggctgaggtgggaggatcacttgggcctgggagttggaggctgcagggaggtatgatcatcccttggccttccagcctgggcgacagagcaagatcctgtctaaaaaggagaaaTAGAGCGGATAAAGAGAA---------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779574 246 - 106955855 tgaggccaggagcttcagacagtcctgggcaacatactttgactccgtctctacagaaaagaaaaatgtgagctgggcatggaggctcatgcctgtggtcccagctactcaggaggctgaggtgggaggatctcttgggcctgggaggcggaggctgcagggagttatgatcaccccttggccctccagcctgggcgacagagcaagatcctgtctgaaaaggagaaatagaggggataaagagaa---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067475 236 + 64156825 tgaggccaggagcttcggacagtcctgggcaacatactgcaaccctgtctctacagaaaagaaaaaagcgagttgggcatggaggctcatgcctgtggtccctgctac-------gctgaggtgggaggatcacttgggcctggaaggcggaggctgcagggagctatg-tcatcccccggcattccagcctgggcgacagagcaagatcctgtctgaaaaggagaaat--agggataaaagagaa---------- i rheMac3.chr19 C 0 I 50 s macFas5.chr19 55121465 245 + 59248254 tgaggccaggagcttcagacagtcctggacaacatactgtgatcctgtctctacagaaaagaaaaaagtgagttgggcatggaggctcatgcctgtggtccctgctactcgggaggctgaggtgggaggatcacttgggcctgggaggcggaggctgcagggagctgtgatcacccctcggcattccagcctgggcggcagagcaagatcctgtctgaaaaggagaaaTGCAGGGAATATAGAGA----------- i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47202167 246 + 51301725 TGAGGCCAGGAGCTTCAGACAGTCCTGGGCAACATactgcaaccctgtctctacagaaaagaaaaaagtgagttgggcatggaggctcatgcctgtggtctctgctactcaggaggctgaggtgggaggatcacttgggcccgggaggcggaggctgcagggagctgtgatcacccctcggcattccagcctgggcgacacagcaagatcctgtctgaaaaggagaaatagaggggataaagagaa---------- i papAnu2.chr19 I 10612 I 7 s chlSab2.chr6 46923310 246 + 50890351 tgaggccaggagcttcagacagtcctgggcaacatactgcaaccctgtctctacagaaaagaaaaaagtgagctgggcatggaggctcatgcctgtggtccctgctactcaggaggctgaggtgggaggatcacttgggcctgggaggtggaggctgcagggagctgtgatcacccctcggcattcctgatagggcgacagagcaagatcctgtctgaaaaggagaaaTACAGGGAatatagagaa---------- i chlSab2.chr6 C 0 I 291 s calJac3.chr22 45482205 230 + 49145316 tgaggcca-------cagagagccc-------------------ctgtctgtacagaaaagaggaaagttagctgagcatggaggctcatgcctgtggtccctgcaactcaggaggctgacgtgagaggatcacttgggcctgggaggtggaggctgcagggagctctgatcacccctcagcattccagcctgggtgacagagcaagaccctgtctcaaaaGGGCAAATACAGGGAATAAAGAGAAAGAGAATCAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I a score=1702.000000 s hg38.chr19_GL949753v2_alt 218642 14 + 796479 ----aTATATATATAT-----------------------------------AT s panTro4.chr19 59151862 49 + 63644993 ----atatatatatatatatatatatatatatatatatatatatatataAAAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779820 12 - 106955855 ----aTATATATAT-------------------------------------AT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067761 10 + 64156825 ----ATATGTGTAT--------------------------------------- i rheMac3.chr19 I 50 C 0 s macFas5.chr19 55121719 10 + 59248254 ----atatatatat--------------------------------------- i macFas5.chr19 I 9 I 291 s papAnu2.chr19 47202420 10 + 51301725 ----atatatatat--------------------------------------- i papAnu2.chr19 I 7 C 0 s calJac3.chr22 45482435 14 + 49145316 ATATATATATACAT--------------------------------------- i calJac3.chr22 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I e chlSab2.chr6 46923556 291 + 50890351 I a score=443.000000 s hg38.chr19_GL949753v2_alt 218656 1 + 796479 G s panTro4.chr19 59151911 1 + 63644993 A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779832 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067771 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47202430 1 + 51301725 a i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45482449 1 + 49145316 G i calJac3.chr22 C 0 I 8028 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I e chlSab2.chr6 46923556 291 + 50890351 I e macFas5.chr19 55121729 291 + 59248254 I a score=9370.000000 s hg38.chr19_GL949753v2_alt 218657 11 + 796479 TTTCATTGTAA s panTro4.chr19 59151912 11 + 63644993 TTTCATTGTAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779833 11 - 106955855 TTTCATTGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067772 11 + 64156825 TTTCATTGTAA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47202431 11 + 51301725 tttcattgtaa i papAnu2.chr19 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I e calJac3.chr22 45482450 8028 + 49145316 I e chlSab2.chr6 46923556 291 + 50890351 I e macFas5.chr19 55121729 291 + 59248254 I a score=15324.000000 s hg38.chr19_GL949753v2_alt 218668 7 + 796479 TCTATAA s panTro4.chr19 59151923 7 + 63644993 TCTATAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779844 7 - 106955855 TCTGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067783 7 + 64156825 TCTGTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122020 7 + 59248254 TCTGTAA i macFas5.chr19 I 291 C 0 s papAnu2.chr19 47202442 7 + 51301725 TCTGTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46923847 7 + 50890351 TCTGTAA i chlSab2.chr6 I 291 C 0 s calJac3.chr22 45490478 7 + 49145316 TCTGTCA i calJac3.chr22 I 8028 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 19706956 232 - 122678785 I e ponAbe2.chr19 56013217 14595 + 60714840 I a score=49876.000000 s hg38.chr19_GL949753v2_alt 218675 27 + 796479 TCTGATTCTGGGG-----AAGG--TGAGCTGATT s panTro4.chr19 59151930 27 + 63644993 TCTGATTCTGGGG-----AAGG--TGAGCTGATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779851 27 - 106955855 TCTGATTCTGGGG-----GAGG--GGAGCTGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067790 27 + 64156825 TCTGATTCTGGGG-----TAGG--GGAGCTGatt i rheMac3.chr19 C 0 I 61 s macFas5.chr19 55122027 27 + 59248254 TCTGCTTCCGGGG-----GAGG--GGAGCTGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47202449 27 + 51301725 TCTGATTCTGGGG-----GAGG--Ggagctgatt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46923854 27 + 50890351 TCTGCTTCCGGGG-----GAGG--GGAGCTGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45490485 27 + 49145316 TCTGATTCAGGGGGTGAAGTGG--Ggagc----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19707188 28 - 122678785 tctgattatgaag-----gaagatggaccttct- i canFam3.chr1 I 232 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 56013217 14595 + 60714840 I a score=-6856.000000 s hg38.chr19_GL949753v2_alt 218702 5 + 796479 -TGTAT s panTro4.chr19 59151957 5 + 63644993 -TGTAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779878 5 - 106955855 -TGTAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55122054 3 + 59248254 -TGT-- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47202478 3 + 51301725 -tat-- i papAnu2.chr19 I 2 I 52 s chlSab2.chr6 46923881 3 + 50890351 -TGT-- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45490512 1 + 49145316 -----t i calJac3.chr22 C 0 I 4 s canFam3.chr1 19707216 5 - 122678785 ttgaa- i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 56013217 14595 + 60714840 I e rheMac3.chr19 60067817 61 + 64156825 I a score=108719.000000 s hg38.chr19_GL949753v2_alt 218707 56 + 796479 TTAATTCCTGATTATCATCTAGGGTTTATGTGACTTTGGAC-ATGAATG--------------TCACCTCT-- s panTro4.chr19 59151962 56 + 63644993 TTAATTCCTGATTATCATCTAGGGTTTATGTGACTTTGGAC-ATGAATG--------------TCACCTCT-- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102779883 55 - 106955855 TCAATTCCTGATTATCATCCA-GGTTTATGTGACCTTGGAA-AAGAATG--------------TCACCTCT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067878 56 + 64156825 ttaATTCCTGATTATCATCCAGGGTTTATGTGACCTTGAAC-ATTAATG--------------TCACCTCC-- i rheMac3.chr19 I 61 C 0 s macFas5.chr19 55122059 56 + 59248254 TTAATTCCTGATTATCATCCAGGGTTTATGTGACCTTGGAC-ATTAATG--------------TCACCTCT-- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47202533 56 + 51301725 ttaattcctgattatCGTCCAGGGtttatgtgaccttggac-attAATG--------------TTACCTCT-- i papAnu2.chr19 I 52 C 0 s chlSab2.chr6 46923886 56 + 50890351 TTAATTCCTGATTATCATCCAGGGTTTATGTGACCTTGGAC-ATTAATG--------------TCACCTCT-- i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45490517 71 + 49145316 ttaattcccaattctccttcacttactatgtgacattggacaatcagtggcttccttcagcctttatcttt-- i calJac3.chr22 I 4 I 2 s canFam3.chr1 19707221 55 - 122678785 acaattct---gcatcatccactgcctgcatgactttgggc-agtaata--------------tccttgctct i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 56013217 14595 + 60714840 I a score=322841.000000 s hg38.chr19_GL949753v2_alt 218763 118 + 796479 GAGCC--------------------TGCTGTCATGAACCCCACTCATCACAGTGGCTGTGGGGGTCAG--TGGTGCCCAGGACATGGGA--GGCTCAGCCATGGTGAATTTCCAGACCA-GTTCAGACAGGAG-GGTGGGGACG------ s panTro4.chr19 59152018 117 + 63644993 GAGCC--------------------TGCTGTCATGAACCCCACTCATCACAGTGGCTGT-GGGGTCGG--TGGTGCCCAGGACATGGGA--GGCTCAGCCATGGTGAATTTCCAGACCA-GTTCAGACAGGAG-GGTGGGGACG------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173421 119 - 60714840 GAGCC--------------------TGTTGTCATGAACCCCACACATCACAGTGGCTGT-GGGGTCAG--TGGTGCCCAGGACATGGGAGGGGCTCAGCCATGGTTAATTTCCAGACCA-GTTAAGACAGGAG-GGTTGGGATG------ i ponAbe2.chr19 n 14595 C 0 s nomLeu3.chr10 102779938 117 - 106955855 GAGCC--------------------TGTTGTCATGAACCCCACTCATCACAGTGGCTGT-GGGGTCAG--TGGTGCCCAGGACTTGGGA--GGCTCAGCCATGGTGAATTTCCAGACCA-GTTCAGACAGGAG-GGTGGGGACG------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60067934 116 + 64156825 GAGCC--------------------TGTTGTCATGAACCCCACTCATCACAGTGGCTGT-GGGGTCAG--TGGTGCCCAGGACACGGGA--TGCTCAGCCGTGGTGGATTTCCAGACCA-GTTCAGACCGGAG-GGT-GGGACG------ i rheMac3.chr19 C 0 I 319 s macFas5.chr19 55122115 116 + 59248254 GAGCC--------------------TGTTGTCATGAACCCCACTGATCACAGTGGCTGT-GGGGTCAG--TGGTGCCCAGGACACGGGA--GGCTCAGCCGTGGTGCATTTCCAGACCA-GTTCAGACCGGAG-GGT-GGGACG------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47202589 116 + 51301725 GAGCC--------------------TGTTGTCATGAACCCCACTCATCACAGTggctgt-ggggtcag--tggtgccCAGGACACGGGA--GGCTCAGCCGTGGTGAATTTCCAGACCA-GTTCAGACCGGAG-GGT-GGGACG------ i papAnu2.chr19 C 0 I 45 s chlSab2.chr6 46923942 116 + 50890351 GAGCC--------------------TGTTGTCATGAACCCCACTGATCACAGTGGCTGT-GGGGTCAG--TGGTGCCCAGGACACGGGA--GGCTCAGCCGTGGTGAATTTCCAGACCA-GTTCAGACCGGAG-GGT-GGGACG------ i chlSab2.chr6 C 0 I 45 s calJac3.chr22 45490590 121 + 49145316 gagac--------------------tgtggtcatgacctccacttctcagagtggatgtgggggttag--tggtgtctgagacatggaaggggctcggcCATGGTGAGTTTCCAGACCATATTTAGACAGGAGTAGT-TGGGTG------ i calJac3.chr22 I 2 C 0 s canFam3.chr1 19707276 138 - 122678785 gagcctcagttccccatctgtgggatgTTGTCCTGAACTGCA-GCTCCAGTGTGGTTGT-GG---CAATTTGGTGTCAGGTCCCAGAAG--GGATGGGTTGCAGTGAGTTTCCAGATCA-GGTAAGAAC--AG-CAT-GGGCTGGTTCCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T a score=149477.000000 s hg38.chr19_GL949753v2_alt 218881 54 + 796479 -------GGAGAGGATCCTGGTGCTGGGCTTCACAGTCGAGGAGGATGATTGACGCCCCCA s panTro4.chr19 59152135 54 + 63644993 -------GGAGAGGATCCCGGTGTTGGGCTCCACAGTCGAGGAGGATGATTGACGCCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173540 54 - 60714840 -------GGAGAGGATCCTGGTGTTGGGCTCCACAGTGGAGGAGGATGATTTATGCCCCCA i ponAbe2.chr19 C 0 I 196 s nomLeu3.chr10 102780055 51 - 106955855 -------GGAGAGGATCCTGGTATTGGGCTCCACAGT---GGAGGATGATTGACGCCCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068369 54 + 64156825 -------GGAGAGGATCCTGGTGTAGGGTTCCACAGTCGAGGAGGATGATTGACGCCCCCA i rheMac3.chr19 I 319 C 0 s macFas5.chr19 55122231 54 + 59248254 -------GGAGAGGATCCTGGTCTTGGGTTCCACAGTCGAGGAGGATGATTGACGCCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47202750 54 + 51301725 -------GGAGAGGATCCTGGTGTGGAGTTCCACAGTCCAGCAGGATGATTGACGCTCCCA i papAnu2.chr19 I 45 C 0 s chlSab2.chr6 46924103 54 + 50890351 -------GGAGAGGATCCTGGTCTTGGGTTCCACAGTCGAGGAGGATGATTGACGCCCCCA i chlSab2.chr6 I 45 C 0 s calJac3.chr22 45490711 54 + 49145316 -------TGAGAGGATCCTGGCATTGAGCCCTGTAGTTGAGAAGGATGATTGATGCACCCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19707414 59 - 122678785 GATATGCTGATGGGATCCC-ATGGCAGACTCTGCAGTCC-GGTGGCTGTTTCGTGTGCCCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T a score=111558.000000 s hg38.chr19_GL949753v2_alt 218935 51 + 796479 CTCAAGAGCCCACATCGGCTCCAAATACCATGAAATTCTCCTTGTGATACG s panTro4.chr19 59152189 51 + 63644993 CTCAAGAGCCCACATCGGCTCCAAATGCCATGAAATTCTCCTTGTGATACG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780106 51 - 106955855 CTCAAGAGCCCACATCGGCTCCAAATACCGTGAAATTCTCCTTGTGATCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068423 51 + 64156825 CTCAAGAGCCGACATCGGCTGCAAACACCAAGAAGTGCTGCTTGTGATGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122285 51 + 59248254 CTCAAGAGCCGACATTGGCTCCAAATACCAAGAAATGCTCCTTGTGACACG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47202804 51 + 51301725 CTCAAGAGCCGACATCGGCTCCAAATACCAAGAAGTGCTGCTTGTGATACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924157 51 + 50890351 CTCAAGAGCCGACATTGGCTCCAAATACCAAGAAATGCTCCTTGTGACATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45490765 51 + 49145316 CTCAAGAGCCCACATCAGCTCCAAATACCAAGAAATGCTCCTTATAATATG i calJac3.chr22 C 0 I 296 s canFam3.chr1 19707473 48 - 122678785 --CTGGAGACCTTGTCTGCTTAGAATCCCA-GGACTGCCACTTACAGTATG i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 4173594 196 - 60714840 I a score=298157.000000 s hg38.chr19_GL949753v2_alt 218986 151 + 796479 TCTGAAATATGCAGATCATCACAGCCACAGGCAGAGAAAGAGGAAAAACAGTTCCTCACATTGAGACGCATCCCCTTCCATGAGCAGAGTTCAATGCTGAGTGGCCACAGGTGTCTGGGACCACC-GAGCGTCATTAGGGAGGAGGAGGCTC s panTro4.chr19 59152240 151 + 63644993 TCTGAAATATGCAGATCATCACAGCCACAGGCAGAGAAAGAGGAAGAACAGTTCCTCACATTGAGACGCATCCCCTTCCATGAGCAGAGTTCAATGCTGAGTGGCCACAGGTGTCTGGGACCACC-CAGGGTCATCAGGGAGGAGGAGGCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780157 151 - 106955855 TCTGAAATATGCAGATCATCACAGCCACAGGCACGGAAAGAGGAAGAACAGTTCCTCACGTGGAGACGCATCCCCTTCAATGAGCAGAGTTCAGTGCTGAGTGGCCACAGGTGTCTGGGACCACC-CAGCTTCATCAGGGAGGAGGAGGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068474 151 + 64156825 TCTGAAATATGCAGATCACCACAGCCACAGACCCAGAAAGAGAAAGAAAAGTTCCCAACATTGAGACGCGTCCCCTGCAATGAACAGAGTTCAAAGCTGAGTGGCCACAGGTGTCCGGGACCACC-CAGGGTCACTAGGGAGGAGGAGGTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122336 151 + 59248254 TCTGAAATATGCAGATCACCACAGCCACAGGCACAGAAAGAGAAAGAAAAGTTCCCAACATTGAGATGCGTCCCCTGCAATGAACAGAGTTCAAAGCTGAGTGGCCACAGGTGTCTGGGACCACC-CAGGGTCATTAGGGAGGAGGAGGTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47202855 148 + 51301725 TCTGAAATATGCAGATCACCACAGCcacaggcacagagagagaaagaaaagttccCAACATTGAGACGCGTCCCCATCAATGAACCGAGTTCAAAGCTGAGAGGCCACAGGTGTCTGGGACCACC-CAGGGTCATTAG---GGTGGAGGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924208 151 + 50890351 TCTGAAATATGCAGATCTCCATAGCCACAGGCACAGAAAGAGAAAGAAAAGTTCCCAACATTGAGATGCGTCCCCTGCAATGAACACAGTTCAAAGCTGAGTGGCCACAGGTGTCCGGGACCACC-CAGGGTCATTAGGGAGGAGGAGGTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45491112 147 + 49145316 TCTGAATTATGTAGATTATGGAAGTTCT--GTGCAGAAAAGAAATGAAAAGTTTTTTAGTTTGAGAAGGCTGCACATCAAAGAACAGAGTTGAAAGCTGAAAGGCCGCATGTGCCTAGGACCATCGTCGGGTCATTAG---GGAGGAGATTT i calJac3.chr22 I 296 C 0 s canFam3.chr1 19707521 142 - 122678785 TGTGGAGTATGCAG----TCACAGACACATGCAGAGAAGCAGGAAATGAAATTTGC-AGATAGAGGTGGA-ACCCAGCAGGAAATAGGGAACTCAGCTGAGTCCTCATTGGTTTCTGGGACCTTG-GAGG---AGTTGAAGGGAGGGTGTTT i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 4173594 196 - 60714840 I a score=94128.000000 s hg38.chr19_GL949753v2_alt 219137 28 + 796479 CCACCTCCATGTGGGACAGAAGAGGAAC s panTro4.chr19 59152391 28 + 63644993 CCACCTCCGTGCGGGACAGAAGAGGAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173790 28 - 60714840 CCACCTCTGTGTGGGACAGAAGAGGAAC i ponAbe2.chr19 I 196 C 0 s nomLeu3.chr10 102780308 28 - 106955855 CCACCTCCGTGTGGGACAGAAGAGGAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068625 28 + 64156825 CCACCTCCGTGTGGGACAGAAGAGGAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122487 28 + 59248254 CCACCTCCGTGTGGGACAGAAGAGGAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203003 28 + 51301725 CCACCTCCGTGTGGGACAGAAGAGGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924359 28 + 50890351 CCACCTCCGTGTGGGACAGAAGAGGAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45491259 28 + 49145316 CTACTTCTGTGTGGGACAGAAGAGGAAC i calJac3.chr22 C 0 I 115 s canFam3.chr1 19707663 27 - 122678785 CTACACTTATG-GATGCAAAGGGGGATC i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T a score=100763.000000 s hg38.chr19_GL949753v2_alt 219165 32 + 796479 CCCACGTCCTCCCAGGCAGGGAGGGGTCAGGG s panTro4.chr19 59152419 32 + 63644993 CCCAGGTCCTCCCAGGCAGGGAGGGGTCAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173818 32 - 60714840 CCCAGGTCCTCACAGGCAGGGAGGAGTCAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102780336 28 - 106955855 CCCAGGTC----CAGGCAGGGAGGGGTCAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068653 32 + 64156825 CCTGGGTCCTCCCAGGCAGGGAGGGGTCAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122515 32 + 59248254 CCCGGGTCCTCCCAGGCAGGGAGGGGTCAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203031 32 + 51301725 CCCGGGTCCTCCCAGGCAGGGAGGGGTCAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924387 32 + 50890351 CCCAGGTCCTCCCAGGCAGGGAGGGGTCAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45491402 32 + 49145316 CCCAGGTCCTCACAGTCAGGGAGGGGGTAGGG i calJac3.chr22 I 115 C 0 s canFam3.chr1 19707690 31 - 122678785 CCAGGGTCTTTTCAG-TGGGGAGGGCTCCAGG i canFam3.chr1 C 0 T 7163 e mm10.chr7 3720593 6634 + 145441459 T a score=32851.000000 s hg38.chr19_GL949753v2_alt 219197 11 + 796479 CTCTGGGTGAG s panTro4.chr19 59152451 11 + 63644993 CTCTGGGTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173850 11 - 60714840 CTCTGGGTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102780364 11 - 106955855 CTCTGGGTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068685 11 + 64156825 CTCTGGGTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122547 11 + 59248254 CTCTGGGTGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203063 11 + 51301725 CTCTGGGTGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924419 11 + 50890351 CTCTGGGTGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45491434 11 + 49145316 GCTTCAGAGGA i calJac3.chr22 C 0 I 538 s canFam3.chr1 102765053 11 + 122678785 CTCTGGGTGAC i canFam3.chr1 n 7163 C 0 e mm10.chr7 3720593 6634 + 145441459 T a score=127420.000000 s hg38.chr19_GL949753v2_alt 219208 48 + 796479 GCTGGAAGCGGTGGCTCCCCCTCCCC--TGTGTGTGTGG-ACAGGCGCT-GG s panTro4.chr19 59152462 49 + 63644993 GCTGGAAGCTGTGGCTCCCCCTCCCC--TGTGTGTGTGG-ACAGGCGCTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4173861 48 - 60714840 GCTGGAAGCTGTGGTTCCTCCTCCCC--TGTGTGTGTGG-ACAGGCACT-GG i ponAbe2.chr19 C 0 I 116 s nomLeu3.chr10 102780375 48 - 106955855 GCTGGAAGCTGTGGCTCCCCCTCCCC--TGTGTGTGTGG-ACAGGCGCT-GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068696 48 + 64156825 GCTGGAAGCTGGGGCTCCCCCTCCCC--TGTGTGTGTGG-ACAGGCGCT-GG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122558 48 + 59248254 GCTGGAAGCTGTGGCTCCCCCTCCCC--TGTGTGTGTGG-ACAGGCGCT-GG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203074 50 + 51301725 GCTGGAAGCTGTGGCTCCCcctcccctgtgtgtgtgtgg-acaggcGCT-GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924430 48 + 50890351 GCTGGAAGCTGTGACTCCCCCTCCCT--TGTGTGTGTGG-ACAGGCGCT-GG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102765064 46 + 122678785 TCTGGAAGCTGTGAGACCC---CACC--AACATGTGTGGTATGGGCACT-GG i canFam3.chr1 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e calJac3.chr22 45491445 538 + 49145316 I a score=553461.000000 s hg38.chr19_GL949753v2_alt 219256 291 + 796479 GGGGTCTCTGCTCACTCACTGGAGGCCACGGTCAGCGCTCAGC-----CCCTCCCCTGTGTGTGAGAAACAGATTCAATCCA--CGGTGGTCAGACATGGGCG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCTGGGCACAATCTTGAGCTGACACTGAGTTTGGGGGAG---------TGGGGCAGGAGCAGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCGTGGGAGAAACCCTTTATGAAAGGCCGGGTGCGTGGGAG--GAGCTGTCCCACAGGAATG s panTro4.chr19 59152511 291 + 63644993 GGGGTCTCTCCTCACTCACTGGAGGCCACGGTCAGTGCTCAGC-----CCCTCCCCTGTGTGTGAGAAACAGATTCAACCCA--CGGTGGTCAGACATGGGTG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCTGGGCAGAATCTTGAGCTGACACTAAGTTTGGGGGAG---------TGGGGCAGGAGCAGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCGTGGGAGAAACCCTTTATGAAAGGCCAGGTGCGTGGGAG--GAGCCGCCCCACAGGAATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780423 298 - 106955855 GGGGTCTCTGCTCACTCACTGGAGGCCATGGTCAGCTCTCAGC-----CCCTCCCCTGTGTGTGAGAAGCAGATTCAACCCA--CGGTGGTCAGACATGGGCGTCTGCTCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCCGGGCACAATCTTGAGCTGACGCTAAGTTTGGGAGAG---------TGGGGCAGGAGCAGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCGTGGGAGAAACTCTTTATGAAAGGCCAGGTGCGTGGGAGGAGAGCTGCCCCACAGGAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60068744 293 + 64156825 GGGGTCTCTGCTCACTCACTGGAGTCCACGCTCAGCTCTCAGC-----CCCTCCCCTGTGTGTGAGAAACAGATTCAGTCCA--CAGTTCTCAGACATGGGTG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCTGGGCACAGTCTTGAGCTGAGGCTAAGTTTGGGAGAG---------TGGGGCAGGAGCAGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCCTGGGAGAAACCCTTTATGAAAGGCCAGGTGCGTGGGAGGAGAGCTGCCCCACaggaatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55122606 293 + 59248254 GGGGTCTCTGCTCACTCACTGGAGTCCACGCTCAGCTCTCAGC-----CCCTCCCCTGTGTGTGAGAAACAGATTCAGTCCA--CGGTGCTCAGATGTGGGCG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCCGGGCACAGTCTTGAGCTGAGGCTAAGTTTGGGAGAG---------TGGGGCAGGAGCAGCGGCATCGATTCCCTTCATCAGGCTGA-TGCCTGGACAGCCCTGGGAGAAACCCTTTATGAAAGGCCAGGTGCGTGGGAGGAGAGCCGCCCCACAGGAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203124 293 + 51301725 GGGGTCTCTGCTGACTCACTGGAGTCCATGCTCTGCTCTCAGC-----CCCTCCCCTGTGTGTGAGAAACAGATTCAGTCCA--CGGTGCTCAGACATGGGCG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGTTGGGCACAATCTTGAGCTGACGCTAAGTTTGGGAGAG---------TGGGGCAGGAGCCGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCCTGGGAGAAACCCTTTGTGAAAGGCCAGGTGCGCGGGAGGAGAGCCGCCCCACAGGAATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924478 293 + 50890351 GGGGTCTCTGCTCACTCACTCGAGTCCACAGTCAGCTCTCAGC-----CCCTCCCGTGTGTGTGAGAAACAGATTTAATCCA--CGCTGCTCAGATATGGGCG-----TCTGCCCCACAGGTGAGTGTGAGGCTGGCGTTGGTCCCATCCCTGCCAGGCACAATCTTGAGCTGAGGCTAAGTTTGGGAGAG---------TGGGGCAGGAGCAGCGGCAACAATCCCCTTCATCAGGCTGA-TGCCTGGACAGCCCTGGGAGGAACCCTTTATGAAAGGCCAGGTGCGAGGGAGGAGAGCCGCCCCACAGGAATC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102765110 288 + 122678785 CATGTCTCTGCCCACTGACCCAGCCCAGAAGGCAGAACTGAGCCTTGTCCCCTCTGTGTGTATGTGGAA-AGTTTCAATCCAGTGGATGTTCCCATGGGGGTC-----TCTG---CATGTGTGAGTGTGGGACTCCTATGGAGGCCATCCCTGCT---------------CCTATGCTAAG-TTGAGAGAGTAGTTGTCATGGGACAGTGTGACTGGGACCATCCACCTCTCCCATCCTGAGCTTCAACACAGCCCTGGGAGCAACTGTCTCTGGAA-CCCAGGTATGTGGGAGGTGAG-GGTTCAAAAGGAATG i canFam3.chr1 C 0 I 17120 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45491445 538 + 49145316 I a score=1678.000000 s hg38.chr19_GL949753v2_alt 219547 7 + 796479 ACAACC-A s panTro4.chr19 59152802 7 + 63644993 ACAACC-A i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780721 5 - 106955855 ACAAC--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60069037 7 + 64156825 acaacca- i rheMac3.chr19 C 0 I 26175 s macFas5.chr19 55122899 6 + 59248254 ACAACC-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203417 6 + 51301725 ACAACC-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924771 6 + 50890351 ACAATC-- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45491445 538 + 49145316 I a score=-2673.000000 s hg38.chr19_GL949753v2_alt 219554 7 + 796479 AGATACG s panTro4.chr19 59152809 7 + 63644993 AGATACG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780726 4 - 106955855 ---TGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55122905 3 + 59248254 --ATA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203423 3 + 51301725 --ATA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924777 3 + 50890351 --ATA-- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45491445 538 + 49145316 I e rheMac3.chr19 60069044 26175 + 64156825 I a score=340655.000000 s hg38.chr19_GL949753v2_alt 219561 214 + 796479 TGAGGAAAACACAGACAGTTGTTGAAATGCATTAGACAGACGTCGTGAAGGTGAAAAATAGTAAATTGAATTAATACCATCGAAAAGTAATTTAATAAATATATACACCTACTATGTAGCCATAAAGTGAAAAATTTgaccgggcgtggtagctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatgacctgaggtcaggag s panTro4.chr19 59152816 214 + 63644993 TGAGGAAAACACAGACAATTGTTGAAATGCATTAGACAGACATCGTGAAGGTGAAAAATAGTAAATTGAATTAATACCATCGAAAAGTAATTTAATAAATATATACACCTACTATGTAGCCATAAAGTGAAAAATTTgaccgggcgtggtagctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780730 170 - 106955855 TGAGGAAAAAATAGACAGTTGTTGAAATGCATTAGACAGACATTGTGAAGCTGAAAAAC--TATATTAAATTAACACCATTAAAAAGGAATTTA------------------------------------------TGTctgggcatggtagttcatgcctgtaatggcagcactttgggaggcggaggcgggcagatcaattgaggctgggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60095219 214 + 64156825 TGAGGAAAATATAGGCAGCTGGTGAAATGCATTAGACAGACATTGTGAAGCTGAAAAATAGCAAATTGAATTAATACCATTGAAAAGTAATTTAATAAATATATACACCTACTATGTAGTCATAAAGTGAAAAATCTgaccaggcgtggtagctcatgcctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggag i rheMac3.chr19 I 26175 C 0 s macFas5.chr19 55122908 214 + 59248254 TGAGGAAAATATAGGCAGCTGGTGAAATGCATTAGACAGACATTGTGAAGCTGAAAAATAGCAAATTGAATTAATACCATTGAAAAGTAATTTAATAAATATATACACCTACTATGTAGTCATAAAGTGAAAAATCTgaccaggcgtggtagctcatgcctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203426 214 + 51301725 TGAGGGAAAAATAGGCAGCTGGTGAAATGCATTAGACAGACATTGTGAAGCTGAAAAATAGCAAATTGAATTAATATCATTGAaaagtaatttaataaatatatacacctactatgtagtCATAAAGTGAAAAATCTgaccgggcgcggtagctcatgcctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46924780 214 + 50890351 TGAGGAAAATATAGGCAGCTGGTGAAATGCATTAGACAGACATTGTGAAGCTGAAAAATAGCAAATTGAATTAATACCATTGAAAAGTAATTTAATAAATATATACACCTACTATGTAGTCATAAAGTGAAAAATCTgaccaggcgtggtagctcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacctgaggtcaggag i chlSab2.chr6 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45491445 538 + 49145316 I a score=337515.000000 s hg38.chr19_GL949753v2_alt 219775 159 + 796479 tttgagacc-agcgtggccaatatggtgaaaccctatctctcctaaaaatacaaaaacaattagctgggtatggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcgctggaacccaggaggcggacattgcagtgagctga s panTro4.chr19 59153030 158 + 63644993 tttgagacc-agcgtggccaatatggtgaaaccccatctctcctaaaaatac-aaaacagttagctgggcatggtcgtgggagcctgtaatcccagctactcgggaggctgaggcaggagaatcgctggaacccatgaggcggacattgcagtgagctga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102780900 158 - 106955855 ttcgagacc-agcctggctgacatggtgaaaccccatctctactaaaaatac-aaaaaaattatctgggcgtggtggtgagtgcctgtaatcccagctactcgggaggctgagacaggagaatctcttgaacctgggcggtggaggctgctgtgtgctga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60095433 159 + 64156825 tttgagacc-agcctggccaacatggtgaaacctcgtctctactaaaaatacaaaaacaattagccgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggcgaatcactggaacccaggaggcggaggttgcagtgagctga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55123122 159 + 59248254 tttgagacc-agcctggccaacatggtgaaacctcgtctttactaaaaatacaaaaacaattagccgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggcgaatcactggaacccaggaggcggaggttgcagtgagctga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47203640 160 + 51301725 tttgagacctggcctggccaacatggtgaaaccccgtctctcctaaaaatacaaaaacaattagccgggtatggtggtgcacatctgtaatcccagctactcgggaggctgaggcaggcgaatcgctggaacccagggggcggaggttgcagtgagctga i papAnu2.chr19 C 0 I 5510 s chlSab2.chr6 46924994 159 + 50890351 tttgagacc-agcctggccaacatggtgaaacctcgtctctactaaaaatacaaaaacaattagccgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggcgaatcactggaacccaggaggcggaggttgcagtgagctga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45491983 156 + 49145316 ttcgagacc-atcctggccaacatggtgaaaccccatttgtaccaaaaactcaaaaa---ttagctgggcgtggtggtacatgcctgtaatcccagctacttggtaggctgaggcaggagaattgcttgaacccagaaggcagaggttgcagtgagctga i calJac3.chr22 I 538 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I a score=89261.000000 s hg38.chr19_GL949753v2_alt 219934 65 + 796479 gatggcaccactgcactccagcctgggccaca-cagcaagactctgtctcaaaa-aaaaaaaaaaaa s panTro4.chr19 59153188 65 + 63644993 gatggcaccactgcactccagcctgggccaca-cagcaagactctgtctcaaaa-aaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102781058 66 - 106955855 gatcgcgcccctgcacttcagctgggacaacaggagcgaaactgtgtctcaaaa-aaaaaaaaaaaa i nomLeu3.chr10 C 0 I 40810 s rheMac3.chr19 60095592 64 + 64156825 gatggcgccactgcactccagcctgggccaca-cagcaagactctgtttcaaaa-aaataaaaata- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55123281 64 + 59248254 gatggcgccactgcactccagcctgggccaca-cagcaagactctgtttcaaaa-aaataaaaata- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46925153 64 + 50890351 gatggcgctactgcgctccagcctgggccaca-cagcaagactctgtttcaaaa-aaataaaaata- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45492139 65 + 49145316 gaccgcaccactgcactccagcctgggtgaca-cagcaagactccatcacaaaacaaacaaagaaa- i calJac3.chr22 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e papAnu2.chr19 47203800 5510 + 51301725 I a score=-738.000000 s hg38.chr19_GL949753v2_alt 219999 4 + 796479 --aaaa s panTro4.chr19 59153253 2 + 63644993 --ga-- i panTro4.chr19 C 0 C 0 s calJac3.chr22 45492204 4 + 49145316 caaa-- i calJac3.chr22 C 0 I 48874 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e nomLeu3.chr10 102781124 40810 - 106955855 I e chlSab2.chr6 46925217 0 + 50890351 C e papAnu2.chr19 47203800 5510 + 51301725 I e macFas5.chr19 55123345 0 + 59248254 C e rheMac3.chr19 60095656 0 + 64156825 C a score=182451.000000 s hg38.chr19_GL949753v2_alt 220003 235 + 796479 agaaaaagaaaaagaaaaaaagaaagtaaacaacttctaaagcgattcaagcaccagaagggttcaaatgaaaatgagaccaaaggaagtaaataaaaaagaggagggaatttgtgagaacacattttaaagggtccattttcaagtcatga--tatccaagtattggcagccagtctgcggatgtaacaaaccgcacggctcatgctcctagcaaatcacaataagtgaacagaat s panTro4.chr19 59153255 233 + 63644993 --aaaaagaaaaaGAAaaaaagaaagtaaacaacttctaaagcgattcaagcaccagaagggttcaaatgaaaatgagaccaaaggaagtaaataaaaaagaggagggaatttgtgagaacacattttaaagggtccattttcaaggcatga--tatctaagtattggcagccagtctgcggatgtaacaaaccgcacggctcatgctcctagcaaatcacaataagtgaacagaat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60095656 223 + 64156825 --------------aaatagaaaaagtaaacaacttctaaagcgattcaagccctagaagggttcaaatgaacatgagaccaaaggaagtaaataagaaggaggaggggatttgtgagaacacattttaaatggtccattttcaaggcatggaccttctcagcactggcagccagtctgcggatttaacaaaccgcagggctcatgctcccagcaaatcacagtaaatgaacagaat i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55123345 223 + 59248254 --------------aaatagaaaaagtaaacaacttctaaagcgattcaagccctagaagggttcaaatgaacatgagaccaaaggaagtaaataagaaggaggaggggatttgtgagaacacattttaaatggtccattttcaaggcatggaccttctcagcactggcagccagtctgcggatttaacaaaccgcagggctcatgctcccagcaaatcacagtaaatgaacagaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46925217 223 + 50890351 --------------aaatagaaaaagtaaacaacttctaaagcgattcaagccctagaagggttcaaatgaaaatgagaccaaaggaagtaaataaaaaggaggaggggatttgtgagaacacattttaaatggtccattttcaaagcatggaccttctcagcactggcagccagtctgcggatttaacaaaccgcagggctcatgctcccagcaaatcacagtaaatgaacagaat i chlSab2.chr6 C 0 I 10 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45492208 48874 + 49145316 I e nomLeu3.chr10 102781124 40810 - 106955855 I e papAnu2.chr19 47203800 5510 + 51301725 I a score=1501.000000 s hg38.chr19_GL949753v2_alt 220238 25 + 796479 ggcggggggttgtgggggaggaggc s panTro4.chr19 59153488 25 + 63644993 ggcggggggttgtgggggaggaggc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55123568 10 + 59248254 -----------gtagagcggg---- i macFas5.chr19 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45492208 48874 + 49145316 I e nomLeu3.chr10 102781124 40810 - 106955855 I e chlSab2.chr6 46925440 10 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I e rheMac3.chr19 60095879 10 + 64156825 I a score=435739.000000 s hg38.chr19_GL949753v2_alt 220263 547 + 796479 ggtcagcccataaaagggaaaaaaattttgttattgggaaatcgcaacttaagcggggaaggggacggg--gtacaaccttataagggggataatgaaactcaggcgaagtctgggaagattgtaacctcatagtactcgaccagtgaggaactggggaagggatagttgagtgccaagagataaattacctgctgtgactgccccggctatgcctacctagcagacatccaattttgcaagaccctgttaaaagtctcactttcAggcgggacatggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaa-accgtctctact--aaaaatacaaaaaattagccgggcgtggtggcgggcacctgtagtcccagctgctcgggaggctgaggcaggagaatggcat--gaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactccatctcaaa s panTro4.chr19 59153513 546 + 63644993 ggtcagcccataaaagggaaaaaaattttgttattgggaaatc-caacttaagcggggaaggggagggg--gtataaccttataagggggataatgaaactcaggcgaagtctgggaagattgtaacctcatagtactcgaccagtgaggaactggggaagggatacttgagtgctaagagataaattacctgctgtgactgccctgcgtatgcctacctagcagacatccaattttgcaagaccctgttaaaagtctcactttcaggcgggacatggtggctcacgcctgtaatcccagcactttgggaggtcaaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacaaggtgaaa-accgtctctact--aaaaatacaaaaaattagccgggtgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcgggagaatggcgt--gaacccaagaggcggggcttgcagtgagcagagatcgcgccactgcactccagcctgggcgacagagcgagactccatctcaaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60095889 549 + 64156825 ggtcagcccataaaagggaaaaaagtttcgttactgggaaattacaagttaagcggggaaggggacgaggtgtataaccttataagggggataatgaaactcaggggaagtctgggaagtttgtaacgtcataatactggaccagtgaggaagtaggggaggg--acttgcgtgctaggagataaattgcctgctgtgactgccccaggtgtgcctgcctagcagacgcccaatcttgcaagaccctattaaaaggctcactttcaggccgggcgcggtggctcacacctgtcatcccagcactctgggaggt-gaggcaggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccttctctactaaaaaaatacaaaaaactagccaggcgaggtggcaggggcctgtagtcccacctacctgggaggctgaggcaggagaatggtgt--aaacccaggaggtggagcttgcagtgagctgagatccggccactgcactccagcctgggctacagagcaagactccgtctcaaa i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55123578 551 + 59248254 ggtcagcccataaaagggaaaaaagtttcgttactgggaaattacaagttaagcggggaaggggacgaggtgtataaccttataagggggataatgaaactcaggggaagtctgggaagtttgtaacgtcataatactggaccagtgaggaagtaggggaggg--acttgcgtgctaggagataaattacctgctgtgactgccccaggtgtgcctgcctagcagacgcccaatcttgcaagaccctattaaaaggctcactttcaggccgggcgcggtggctcacacctgtaatcccagcactctgggaggt-gaggcaggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccttctctactaaaaaaatacaaaaaactagccaggcgaggtggcaggcgcctgtagtcccacctacctgggaggctgaggcaggagaatggtgtaaaaacccaggaggtggagcttgcagtgagctgagatccggccactgcactccagcctgggctacagagcaagactccgtctcaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46925450 549 + 50890351 ggtcagcccataaaagggaaaaaagtttcgttactgggaaattacaagttaagcggggaaggggacgagatatataaccttataagggggataatgaaactcaggggaagtctgggaagattgtaacctcatagtactggaccagtgaggaagtgagggaggg--actttcgtgctaggagataaattacctgctgtgactgccccaggtgtgcctgcctagcagacgcccaatcttgcaagaccctattaaaagtctcacgttcaggccgggcgcggtggctcacgcctgtaatcccagcactctaggaggc-gaggtaggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccttctctactaaaaaaatacgaaaaactagccgggcgaggtggcgggcgcctgtagtcccacctactcgggaggctgaggcaggagaatggtgt--aaaccccggaggtggaggttgcagtgagctgagatctggccactgcactccagcctgggtgacagagtgagattccatctcaaa i chlSab2.chr6 I 10 I 139 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45492208 48874 + 49145316 I e nomLeu3.chr10 102781124 40810 - 106955855 I e papAnu2.chr19 47203800 5510 + 51301725 I a score=6006.000000 s hg38.chr19_GL949753v2_alt 220810 11 + 796479 aaaaaaaaaaa s panTro4.chr19 59154059 11 + 63644993 aaaaaaaaaaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096438 11 + 64156825 aaaaaaaaaaa i rheMac3.chr19 C 0 I 125 s macFas5.chr19 55124129 11 + 59248254 aaaaaaaaaaa i macFas5.chr19 C 0 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45492208 48874 + 49145316 I e nomLeu3.chr10 102781124 40810 - 106955855 I e chlSab2.chr6 46925999 139 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I a score=1638.000000 s hg38.chr19_GL949753v2_alt 220821 6 + 796479 aaaaaa s panTro4.chr19 59154070 6 + 63644993 aaaaaa i panTro4.chr19 C 0 I 119 s macFas5.chr19 55124140 6 + 59248254 aaaaaa i macFas5.chr19 C 0 I 137 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45492208 48874 + 49145316 I e nomLeu3.chr10 102781124 40810 - 106955855 I e chlSab2.chr6 46925999 139 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I e rheMac3.chr19 60096449 125 + 64156825 I a score=1092.000000 s hg38.chr19_GL949753v2_alt 220827 2 + 796479 TT s panTro4.chr19 59154195 2 + 63644993 TT i panTro4.chr19 I 119 C 0 s nomLeu3.chr10 102821934 2 - 106955855 TT i nomLeu3.chr10 I 40810 C 0 s calJac3.chr22 45541082 2 + 49145316 TT i calJac3.chr22 I 48874 C 0 e mm10.chr7 3720593 6634 + 145441459 T e canFam3.chr1 102765398 17120 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e chlSab2.chr6 46925999 139 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I e macFas5.chr19 55124146 137 + 59248254 I e rheMac3.chr19 60096449 125 + 64156825 I a score=56013.000000 s hg38.chr19_GL949753v2_alt 220829 101 + 796479 CGCAGCAGGGTCTGCTGGGGCAAAGCAAGGGGTTCGTCTCCTGGTAAGTTTCCCTGGGACCTCTCAGTACCACCTCCCCCTGTCCTGCTCCCAG-TGGGACT s panTro4.chr19 59154197 101 + 63644993 CGCAGCAGGGTCTGCTGGGGCAAAGCAAGGGGTTCGTCTCCTGGCAAGTTTCCCTGGGACCTCTCAGTACCACCTCCCCCTGTCCTGTTCCCAG-TGGGACT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102821936 102 - 106955855 CACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCTGGGAAGGTTCCCTGGGACCTCTCAGCCCCGCCAGCCCCTGCCCTGTTCCCAGATGGGGCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45541084 101 + 49145316 CACGGCAGCATCTGCT-GGGCAGAGCAAGGGGATTGTCTCCTGGGAAGTTTCCCTGGGATGTCTCAGCCCCGccagcccctgcccagctcccagatggggca i calJac3.chr22 C 0 C 0 s canFam3.chr1 102782518 98 + 122678785 CACAGCAGCATCTG-TGGGGTAGAAC--GGGGTGTATGTCGTGGCAAAGTCCCCTGAGCTCCCTCAGGGCTG-CAGACCCTGACCTGCTCCCAGATGGGGCG i canFam3.chr1 I 17120 C 0 e mm10.chr7 3720593 6634 + 145441459 T e ponAbe2.chr19 4173909 116 - 60714840 I e chlSab2.chr6 46925999 139 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I e macFas5.chr19 55124146 137 + 59248254 I e rheMac3.chr19 60096449 125 + 64156825 I a score=13514.000000 s hg38.chr19_GL949753v2_alt 220930 58 + 796479 GCTGAGATCTAGGGAG----CGGGTGTGATGTCCCTGAGGTTCCACAGTATGAAGT---GA-ACCA s panTro4.chr19 59154298 58 + 63644993 GCTGAGATCTAGGGAG----CGGGTGTGATGTCCCCGAGGTTCCACAGTATGAAGT---GA-ACCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102822038 59 - 106955855 ACTGAGATGCAGGGAG----GGGCTGCGATGTCCCCGAGGTCCCACAGTGTGGGGG---GAGATCA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45541185 42 + 49145316 gctgagatccagggag----gggttgtgatgtccc-aaggtcccaca------------------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3713959 58 + 145441459 ACAGAGAATCAGGGAA-----AGCTGGGACATCCCT--GCTTCCATCAAGTGAAGTTCAGA-TCCG i mm10.chr7 T 6634 I 5 s canFam3.chr1 102782616 53 + 122678785 GCTGTGACCCAGGGGATCCAGGGGTGAGGTG---CTGAGGTCATGCATGGGGGAAT---------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4173909 116 - 60714840 I e chlSab2.chr6 46925999 139 + 50890351 I e papAnu2.chr19 47203800 5510 + 51301725 I e macFas5.chr19 55124146 137 + 59248254 I e rheMac3.chr19 60096449 125 + 64156825 I a score=10795.000000 s hg38.chr19_GL949753v2_alt 220988 9 + 796479 TGTTCCCCT s panTro4.chr19 59154356 9 + 63644993 TGTTCCCCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102822097 9 - 106955855 TCTCACCCT i nomLeu3.chr10 C 0 T 24642 s rheMac3.chr19 60096574 9 + 64156825 TGTTCCCCT i rheMac3.chr19 I 125 C 0 s macFas5.chr19 55124283 9 + 59248254 TGTTCCCCT i macFas5.chr19 I 137 C 0 s papAnu2.chr19 47209310 9 + 51301725 TGTTCCCCT i papAnu2.chr19 I 5510 C 0 s chlSab2.chr6 46926138 9 + 50890351 TGTTCCCCT i chlSab2.chr6 I 139 C 0 s calJac3.chr22 45541227 4 + 49145316 -----CCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3714022 2 + 145441459 TG------- i mm10.chr7 I 5 C 0 s canFam3.chr1 102782669 1 + 122678785 --------T i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4173909 116 - 60714840 I a score=9177.000000 s hg38.chr19_GL949753v2_alt 220997 4 + 796479 GAGC s panTro4.chr19 59154365 4 + 63644993 GAGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096583 4 + 64156825 GAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124292 4 + 59248254 GAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209319 4 + 51301725 GAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926147 4 + 50890351 GAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541231 4 + 49145316 GAGC i calJac3.chr22 C 0 I 733 s canFam3.chr1 102782670 4 + 122678785 GGGT i canFam3.chr1 C 0 C 0 e mm10.chr7 3714024 0 + 145441459 C e ponAbe2.chr19 4173909 116 - 60714840 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=267983.000000 s hg38.chr19_GL949753v2_alt 221001 184 + 796479 CCCAGACCCTTCCCAGCCCCTTCCTGTTACTAGTGAAACTGCAGGGTCCCCATCTGCACCCCAGGTGCACCCCCTCTTCCTCTTACTCACTGAGGTTTTCTTCTTGGATGTCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACAC-GAGAGTGTGG---TGTGGTGGAGTGTG-----------GGAGTCTGGGGTCTTTGG s panTro4.chr19 59154369 184 + 63644993 CCCAGCCCCTTCCCAGCCCCTTCCTGTTACTAGTGAAACTGCAGGGTCCCCATCTGCACCCCAGGTGCACCCCCTCTTCCTCTTACTCACTGAGGTTTTCTTCTTGGATGTCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACAC-GAGAGTGTGG---TGTGGGGGAGTGTG-----------GGAGTCTGGGGTCTTTGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096587 184 + 64156825 CCCAGACCCTTCCCAGCCCCTTCCTGTTACTACTGAAACTGCAGGGCCCCCATCTGCACCCCAGGTGCACCCGCTCTTCCTCTCACTCACTGAGGTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACA--GAGGGTGTGG--TTGGGGGGGAGTGTG-----------GGAGTCTGGGGTCTTCGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124296 184 + 59248254 CCCAGACCCTTCCCAGCCCCTTCCTGTTACTACTGAAACTGCAGGGCCCCCATCTGCACCCCAGGTGCACCCGCTCTTCCTCTCACTCACTGAGGTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACA--GAGGGTGTGG--TTGGGGGGGAGTGTG-----------GGAGTCTGGGGTCTTCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209323 180 + 51301725 CCCAGCCCCTTCCCAGCCCCTTCCTGTTACCACTGAAACTGCAGGGCCCCCATCTGCACCCCAGGTGCACCCCCTCTTCCT----CTCACTGAGGTTTTCTTCCTGGATGTCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACA--GAGAGTGTGG--TTGGTGGGGAGTGTG-----------GGAGTCTGGGGTCTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926151 180 + 50890351 CCCAGCCCCTTCCCAGCCCCTTCCTGTTACCACTGAAACTGCAGGGCCCCCGTCTGCACCCCAGGTGCACCCCCTCTTCCT----CTCACTGAAGTTTTCTTCCTGGATTCCAGCAGCTGGGCTGGACCTGGGG----------------GAGGACA--GAGTGTGGTG--GGGCGGGGGAGTGTG-----------GGAGTCTGGGGTCTTTGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3714024 177 + 145441459 ---AAACCCTCTCCAACAC---CCCGGTAATTCTGAAGCCCCAG---CCATCTCCCCCCCCCAGG-----ACTCCCTTTCT----CTCACATAGGCTTTCTTCCTGGGTGGCAGCAGCTGGGTTGGGCCTGGAG------------------GGACAA-GGAGACGTCACTTAGCAGTGAGATGTGTCATACGGGCAGGGGTCT-AGGTCTCTGT i mm10.chr7 C 0 C 0 s canFam3.chr1 102782674 161 + 122678785 CCTCACCCCTTCCCAAACCTT--------------------------CCCAGCCCACCCCCAGGGTGG----CCCCTTCCT----CTCACAGAGGGTTTCCTCCTGGGCGACAGCAGCTGGCCTGGAGCTGGGGAGGAGACATGGTGTCAGAGGGCATGCAGGGGGCGA--GCGGGTGGGAGTGTG-----------GGGGTCTGTGG------- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=6111.000000 s hg38.chr19_GL949753v2_alt 221185 3 + 796479 GCA s panTro4.chr19 59154553 3 + 63644993 GCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096771 3 + 64156825 GCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124480 3 + 59248254 GCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209503 3 + 51301725 GCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926331 3 + 50890351 GCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102782835 3 + 122678785 GCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3714201 0 + 145441459 C e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=235210.000000 s hg38.chr19_GL949753v2_alt 221188 144 + 796479 -GAATTACCTCCTCAGCAGACCCCTGTTCTTGGGCTCTGGTCCCACGGCCCCTGCAGGGTGTTGGAAATCAGCCTCTCTCTGGGCTAGGTGAAGAAGGACAAAGTCTCAGCCCTGGGAACCTTAGAACCACCCACCCAGTACATG s panTro4.chr19 59154556 144 + 63644993 -GAATTACCTCCTCAGCAGGCCCCTGTTCTTGGGCTCTGGACCCACAGCCCCTGCAGGGTGTTGGAAATCAGCCTCTCTCTGGGCTGGGTGAAGAAGGACAAAGTCTCAGCCCTGGGAACCTTAGAACCACCCACCCTGTACATG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096774 144 + 64156825 -GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGGTGTTGGAAATCAGCCTTTCTCTGGACTAGGTGAAGAAGGACAAAGTCTCAGCCCTGGGAACCTTAGAACCACGCACCCTGTACATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124483 144 + 59248254 -GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGGTGTTGGAAATCAGCCTCTCTCTGGACTAGGTGAAGAAGGACAGAGTCTCAGCCCTGGGAACCTTAGAACCACGCACCCTGTACATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209506 144 + 51301725 -GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGGTGTTGGACATCAGCCTTTTTCTGGGCTGGGTGAAGAAGGACAGAGTCTCAGCCCTGGGAACCTTAGAACCACGCACCCTGTACATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926334 144 + 50890351 -GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGGTGTTGGAAATCAGCCTTTCTCTGGGCTGGGTGAAGAAGGACAGAGTCTCAGCCCTGGGAACCTTAGAACCACGCACCCTGTACATG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3714201 138 + 145441459 -GATTTACCTCTTCTGGAGTTCTCCTTTCCTGGTTATGGGCTCTTCAGCTCCTGAAGAAAGTTGCAAGTCTTTCTCTTTCTGGACT--GCAAGGGAGG--GGAGTCTCAG--CTAGGAGGATGGGAAGCCCCTCCCCTGGGCATG i mm10.chr7 C 0 I 20668 s canFam3.chr1 102782838 113 + 122678785 GGAGTTACCTGTCCTGAAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCTGGACATTAGGAATCATCATTCCTCTGGGAT-----------------------------GGAAGGTTACAACCTC---CCCGCTCCATG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=26307.000000 s hg38.chr19_GL949753v2_alt 221332 17 + 796479 CGACTTTAGGGGAAAAA s panTro4.chr19 59154700 17 + 63644993 CGACTTTAGGGGAAAAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096918 17 + 64156825 CGACTTTAGGGGAAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124627 17 + 59248254 CGACTTTAGGGGAAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209650 17 + 51301725 CGACTTGAGGGGAAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926478 17 + 50890351 CGACTTGAGGGGAAAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102782951 17 + 122678785 TGATTCCAGGGAAAGGA i canFam3.chr1 C 0 n 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=43372.000000 s hg38.chr19_GL949753v2_alt 221349 42 + 796479 ATGAAACTTGAAAACACACCCatatatatatatatat----------------------atata s panTro4.chr19 59154717 42 + 63644993 ATGAAACTTGAAAACACACCCatatatatacatacat----------------------atata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096935 42 + 64156825 AGGAGACTTGAAAacacactcatatatgtgtgtatat----------------------acaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124644 42 + 59248254 AGGAGACTTGAAAACACACTCATATATGTGTGTATAT----------------------ACACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209667 64 + 51301725 AGGAGACTTGAAAacacactcatatatgtgtgtatatatatatacacccacacatacacacaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926495 42 + 50890351 AGGAGACTTGAAAACACACTCatatatgtgtgtatat----------------------atata i chlSab2.chr6 C 0 I 9759 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102782968 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T a score=36502.000000 s hg38.chr19_GL949753v2_alt 221391 58 + 796479 ------tatatatatatatatata-------tattttttttttttgagacaaggtctcgctctgtcgccca s panTro4.chr19 59154759 61 + 63644993 ------tatatatatatatatata----tttttttttttttttttgagacaaggtctcgctctgtcgccca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60096977 53 + 64156825 cacacacacacacatatatatata------------------tttgagacaaggtctcgctctgccgccca i rheMac3.chr19 C 0 I 9954 s macFas5.chr19 55124686 53 + 59248254 CACACACACACACATATATATATA------------------tttgagacaaggtctcgctctgccgccca i macFas5.chr19 C 0 I 9856 s papAnu2.chr19 47209731 71 + 51301725 cacacacacacacatatatatatatatatatatatttttttttttgagacaaggtctcgctctgccgccca i papAnu2.chr19 C 0 I 10476 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102782968 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T e chlSab2.chr6 46926537 9759 + 50890351 I a score=26357.000000 s hg38.chr19_GL949753v2_alt 221449 298 + 796479 ggctggagcacagtggtgcgatcccagctcactgcagccttgacctcatagggtcaagtgatcctcctgcctcagcgtcttgagtagctgggaccacgggtgcacaccaccaaacctggcttatttgcatttttaattttttttgtagagatggggtctcaccacattgcccagagtcctctgaaactcctgggctcaagccatccacctgcctcagccttccaaagtactgcgattacaggcatAGTTGTTTTAAATACTGGATACACTTAAAAAGGCCCGAAGACGTTGGGCCGAA s panTro4.chr19 59154820 298 + 63644993 ggctggagcacagtggtgcaatcccagctcactgcagccttgaactcatagggtcaactgatcctcctgcctcagcgtcttgagtagctgggaccacgggtgcacaccaccaaacctggcttatttgcattttaaattttttttgtagagatggggtctcaccacattgcccagagtcctctcaaactcctgggctcaagcaatccacctgcctcagccttccaaagtgctgcaattacaggcatAGATGTTTTAAATACTGGATACACTTAAAAAGGCCCGAAGACTTTgggcccaa i panTro4.chr19 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102782968 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e nomLeu3.chr10 102822106 24642 - 106955855 T e chlSab2.chr6 46926537 9759 + 50890351 I e papAnu2.chr19 47209802 10476 + 51301725 I e macFas5.chr19 55124739 9856 + 59248254 I e rheMac3.chr19 60097030 9954 + 64156825 I a score=48698.000000 s hg38.chr19_GL949753v2_alt 221747 278 + 796479 tggctcatgcctataatcccagcactttgggaggctgaggcgggtggattgcttgaactcaggagtttgagaccagcctcggcaacatagtgagaccccccatctctcccccgc-aaaaaaataattagcctggcgtggtgataggggcctgtagtcccagctactcaggaggctgaggtaggaggatcattgaggatcttgggaggtggaggttgcagcgagccgagatcacaccactgcactccagcctgggtgacagagccagatcacgtctcaa-----------------a s panTro4.chr19 59155118 278 + 63644993 tggctcatgcctataattccagcactttggaaggctgaggctggtggattgcttgaactcaggagtttgagaccagcctgggcaacatagtgaga-cccccatctctcccccacaaaaaaaataattagcctggcgtggtgataggggcctgtagtcccagctactcagaaggctgaggtaggaggatcattgaggatcttgggaggtggaggttgcagcgagccgagatcacaccactgcactccagcctgggtgacagagccagatcacgtctcaa-----------------a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102797464 290 - 106955855 tggctcatgcctggaatcccagcccttaacgaggctgaggcaggaggtgggcttgaggccaggagcttcagacagtcttgggcaacatactttga--ctccgtctctacagaa--aagaaaaaagtgagctgggcatggaggctcatgcctgtggtcccagctactcaggaggctgaggtgggaggatcatttggg--cctgggaggcggaggctgcagggatttatgatcaccccttggccctccagcctgggcgacagagcaagatcctgtctgaaaaggagaaaTAGAGGGGA i nomLeu3.chr10 T 24642 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102782968 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e chlSab2.chr6 46926537 9759 + 50890351 I e papAnu2.chr19 47209802 10476 + 51301725 I e macFas5.chr19 55124739 9856 + 59248254 I e rheMac3.chr19 60097030 9954 + 64156825 I a score=3891.000000 s hg38.chr19_GL949753v2_alt 222025 10 + 796479 taaaataaaa------------- s panTro4.chr19 59155396 10 + 63644993 taaaataaaa------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102797754 23 - 106955855 TAAAGAGAAATATATATATATGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55134595 10 + 59248254 TAAAGTAAAA------------- i macFas5.chr19 I 9856 C 0 s papAnu2.chr19 47220278 10 + 51301725 taaagtaaaa------------- i papAnu2.chr19 I 10476 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102782968 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e chlSab2.chr6 46926537 9759 + 50890351 I e rheMac3.chr19 60097030 9954 + 64156825 I a score=13485.000000 s hg38.chr19_GL949753v2_alt 222035 35 + 796479 taaaaaGCTCAAAGAATAAATTACTTGCACATACA s panTro4.chr19 59155406 35 + 63644993 taaaaaGCTCAAAGAATAAATTACTTGCACGTACG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102797777 35 - 106955855 TAAAAAGCCCAAAGAATAAATTACTTGCACGTACG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55134605 28 + 59248254 TCA-------GGAGAATCAAGCACTGCCACGCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220288 28 + 51301725 tca-------gGAAAATCAAGCACTGCCACGCATG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 102997977 31 + 122678785 TGAAAAGGCAAAAG----AAATATTCACAAGTATA i canFam3.chr1 n 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I e chlSab2.chr6 46926537 9759 + 50890351 I e rheMac3.chr19 60097030 9954 + 64156825 I a score=15303.000000 s hg38.chr19_GL949753v2_alt 222070 8 + 796479 CTCATATT s panTro4.chr19 59155441 8 + 63644993 CTCTCATT i panTro4.chr19 C 0 I 1476 s nomLeu3.chr10 102797812 8 - 106955855 CTCTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60106984 8 + 64156825 CTCACATT i rheMac3.chr19 I 9954 C 0 s macFas5.chr19 55134633 8 + 59248254 CTCACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220316 8 + 51301725 CTcacatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936296 8 + 50890351 CTCACATT i chlSab2.chr6 I 9759 C 0 s canFam3.chr1 102998008 8 + 122678785 TTCACATG i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I a score=495006.000000 s hg38.chr19_GL949753v2_alt 222078 252 + 796479 TATTCTCTTCTTTCTAGATTTTTCAGCTGGGACTTTCTGGAGCTGTTTTTCTAAGCTGACTTTCTTGTGTGTTTGGTTCCCCTTTGGTTGGTGCCCTGATCCCACCCTCGGTGGGCCCACAGGTTCCCCCAGTCCCTG-----------------CTCACCCAATGTCCTGTGTTTGCTCTGACGCCGACATTG------------GAGGAGGAGGACGAGCGGCAGGACAAAGGCCACTGAGACCCCGGTTACAACCCCCAGGTATCTTCCCAGACCTTG s panTro4.chr19 59156925 252 + 63644993 TATTCTCTTCTTTCTAGATTTTTCAGCTGGGACTTTCTGAAGCTGTTTTTCTAAGCTGACTTTCTTGTGTGTTTGGTTCCCCTTTGGTTGGTGCCCTGATCCCACCCTCGGTGGGCCCACAGGTTCCCCCATTCCCTG-----------------CTCACCCAATGTCCTGTGTTTTCTCTGACGCCGACATTG------------GAGGAGGAGGACGAGTGGCAGGACAAAGGCCACTGAGACCCTGGTTACAACCCCCAGGTATCTTCCCAGACCTTG i panTro4.chr19 I 1476 C 0 s nomLeu3.chr10 102797820 252 - 106955855 TATTCTCTTCTTTCTAGATTTTTCAGCTGGGACTTTCTGGAGCTGTTTTTCTAAGCTGACTTTCTTGTGTGTTTGCTTCCCCTTTGGTTGGTGCCCTGAGCCCATCCTCGGTGGGTCCACAGCTTCCCCCATTCCGTA-----------------CTCACCCAACGTCCTGTGTTTGCTCTGACGCCGACATTg------------gaggaggaggaagagcagcaggaCAAAGGCCACTGAGACCCCCGCTACAGCCCCCAGGTATCTTCCCAGACCTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60106992 264 + 64156825 TATTCTCTTCTTTCTCGATGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGTGTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCACGGGTCTCCTCATTCCCTA-----------------CTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCagaggaggaggaagaggaggaggaagagcagcaggaTGAAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134641 264 + 59248254 TATTCTCTTCTTTCTCGATGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGTGTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCACGGGTCACCCCATTCCCTA-----------------CTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggaggaggaagaggaggaggaagagcagcaggatgaAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220324 264 + 51301725 tattctcttctttctcgATGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGTGTTTGGGTTCCCTTTAGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCACGGGTCACCCCATTCCCTA-----------------CTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGtcggaggaggaagaagaggaggaggaagagcagcagGATGAAGGCCACTGAGACCCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936304 264 + 50890351 TATTCTCTTCTTTCTCGATGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGTGTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCAGTCAGCCCACGGGTCACCCCATTCCCTA-----------------CTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggagaaggaagaggaggaggaagagcagcaggatgaAGGCCACTGAGACCCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102998016 272 + 122678785 --GACCCCTCTTTCTGGGTTTCTCA-TTGGGAGATCCTGGAG------TCCTACGCTGGCCTTCCCACCTCTCTGGGTTCCCTCTGGCCACTGCCCTGAGCTCACCCTCGGTCAGCCCATGGGGCACCACTATCCCTGGGGCCCTTCAGCTCCTTCTTACCCGGCTTCCTGCCTTTGCCTCGATGCCTCTGTCGGACCAGGAAGAGGACGAGGAGGCAGAGCAGCAGGACGAAGGCCACTAAGGCCCCAACAAGGATGTACAGGTACTGGTCTGAGGCTTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45541235 733 + 49145316 I a score=129037.000000 s hg38.chr19_GL949753v2_alt 222330 56 + 796479 CGCGTGA-TGACGTCGGGAATGAGG--ATGACATCGCTGATGtgagcacctactgtgtg s panTro4.chr19 59157177 56 + 63644993 CGCGTGA-TGACGTCGGGAATGAGG--ATGACATCGCTGATGtgagcacctactgtgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798072 56 - 106955855 CGCGTGA-TGACGTCGGGAAAGAGG--ATGACatcactgatgtgagcgcctactgtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60107256 56 + 64156825 AGCGTGA-TGACGTCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134905 56 + 59248254 TGCGTGA-TGACGTCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220588 56 + 51301725 AGCGTGA-TGACGTCAGGAATGGGT--ATGACGTCATTGAtgtgagcacctactgtgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936568 56 + 50890351 AGCGTGA-TGACATCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541968 54 + 49145316 AGCATGA-GGACGTCAGGAATGGGG---TGGTGTtactgat-tgagcgcctactgtgtg i calJac3.chr22 I 733 C 0 s canFam3.chr1 102998288 59 + 122678785 AGCAGGAGCTACAGCATGAATGAGTCAGTGAtgccatttaactgagcgtctactgtgtg i canFam3.chr1 C 0 n 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4173909 116 - 60714840 I a score=370900.000000 s hg38.chr19_GL949753v2_alt 222386 176 + 796479 caggcgcgtgctgggt-----cttcatgagctctaaccctcacagcagtcgtgcaacgtgggattgccaa--cccc-ccaacccatttcacagatgcacaaactgaggctcagaggggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaggggaacctgggaccttg s panTro4.chr19 59157233 176 + 63644993 caggcgcgtgctgggt-----cttcatgagctccaaccctcacagcagtcgtgcgacatgggattgccaa--cccc-ccaacccatttcgcagatgcacaaactgaggctcagaggggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaggggaacctgggaccttg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798128 177 - 106955855 caggcgcgtgctgggt-----cttcgtgagctccaaccctcacagcagtcgtgcagcatgggattgccaa--ccccaccaacccatttcgcagatgcacaaactgaggctcagaggggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaagggaacctgggaccttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60107312 176 + 64156825 caggtgcgagctaggtctttccttcatgagctccaaccctcacagcagtcgtgcaacatgggattgccaa--cccc-ccaa-----ttcacagaggagcaaaccgaggctcagagaggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaagggaacccaggaccttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134961 176 + 59248254 caggcgcgagctaggtctttccttcatgaactccaaccctcacagcagtcgtgcaacatgggattgccaa--cccc-ccaa-----ttcacagaggagcaaaccgaggctcagagaggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaagggaacccaggaccttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220644 177 + 51301725 caggcgCGAGCTAGGTCTTTCCTTCATGAGCTCCAACCCTCACAGCAGTCGTGCAACATGGGATTGCCAA--CCCC-CCAA----TTTCACAGaggagcaaactgaggctcagagaggagaatCGCCTGCCCCAGGCCCCCCAGCCTGGAAGAAGCAGGTCTGGGAAGGGAACCTGGGACCTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936624 176 + 50890351 caggcgcgagctaggtctttccttcatgagctccaaccctcacagcagtcgtgcaacatgggattgccaa--cccc-ccaa-----ttcacagaggagcaaactgaggctcagagaggggaatcgcctgccccaggccccccagcctggaagaagcaggtctgggaagggaacccgggaccttg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542022 182 + 49145316 caggtgactgctcggcctcttattcaccaccttcaacccccactacagtcgagcagcgcggaattgacacatccac-cccacccactttacagacaaa-aaactgaggctcagagaggggagtcgcctgccccaggccccccagctaggcagcagcagagctgggaagggaacctgggAGTTTG i calJac3.chr22 C 0 T 32153 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I a score=393143.000000 s hg38.chr19_GL949753v2_alt 222562 216 + 796479 tgttttccccagctgtcctcctgctgccccacCAGGTGGACACCTGCTTCCTGCTCTGGGTCTTCTCATCTGACAGCAGGGGCCTGTCTTAGTGTCTCCATCTGGGGCT-GTGTCCTCCTTACAACCCTCCCTTCCCCAGCACAGCAGGGCCTGGGGGAGGGAGTGGGCTGTACAGGACGGACCCTGCATTGCTCTCACCCCCAGCCCAGCCAGGTC s panTro4.chr19 59157409 216 + 63644993 tgttttccccagctgtcctcctgctgccccacCAGGTGGACACCCGCTTCCTGCTCTGGGTGTCCTCATCTGACACGAGGGGCCTGTCTTAGTGTCTCCATCTGGGGCT-GTGTCCTCCTTACAACCCTCCCTTCCCCAGCACAGCAGGGCCTGGGGGAGGGAGTGGGCTGTACAGGACGGACCCTGCATTGCTCTCACCCCCAGCCCAGCCAGGTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798305 217 - 106955855 cgttttccccagctgtcctcctgctgccccaccaGGTGGACACCCACTTCCTGCTCTGAGTTTCCTCATCTGACAGGAAGGGCCTGTCTTAGTGTCTCCATCTGGGGCTGGTGTCCTCCTTACAACCCTCCCTTCCCCAGCACAGCAGGGCCTGGCGGAGGGAGTGGGCTGTACAGGACGGACCTTGCATTGCTCTCACCCCCAGCCCAGCCAGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60107488 217 + 64156825 agttttccccagctgttctcctgctgccctaccaGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCGTCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTGGTGTCCTCCTTACGACCCTCCCTTCCCCAGCACAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTGTCACCCCCAGCTCAGCCAGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135137 217 + 59248254 tgttttccccagctgttctcctgctgccctaccaGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCGTCTGATAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTGGTGTCCTCCTTACGACCCTCCCTTCCCCAGCACAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTGTCACCCCCAGCTCAGCCAGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220821 217 + 51301725 TGTTTTCCCCAGTTGTTCTTCTGCTGCCCTACCAGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCATCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTGGTGTCCTCCTTAccaccctcccttccccagcaCAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTCTCACCCCCAGCTCAGCCAGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936800 217 + 50890351 tgttttccccagttgttctcctgctgccctaccaGGTGGACACCCGCTTCTTGCTCTGGGTCTCTTCATCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGACTGGTGTCCTCCTTACCACCCTCCCTTCCCCAGCACACCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTACATTGCTCTCACCCCCAGCTCAGCCAGGTC i chlSab2.chr6 C 0 T 10403 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45542204 32153 + 49145316 T a score=18116.000000 s hg38.chr19_GL949753v2_alt 222778 16 + 796479 CATCTCCTACTCTGCC s panTro4.chr19 59157625 16 + 63644993 CGTCTCCTACTCTGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798522 16 - 106955855 CGTCTCCCACCCTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60107705 16 + 64156825 CGCTTCCCACTCTGCC i rheMac3.chr19 C 0 T 10691 s macFas5.chr19 55135354 16 + 59248254 CGCTTCCCACTCTGCC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47221038 16 + 51301725 CGCTTCCCGCTCTGCC i papAnu2.chr19 C 0 I 1 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45542204 32153 + 49145316 T e chlSab2.chr6 46937017 10403 + 50890351 T a score=15926.000000 s hg38.chr19_GL949753v2_alt 222794 27 + 796479 AATCCCTGACCTTCCCATGCAGAgcct s panTro4.chr19 59157641 27 + 63644993 AATCCCTGACCTTCCCATGCAGggcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798538 27 - 106955855 AAGCCCTGACCTTCCCATGCAGggcct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55135371 26 + 59248254 -AGTTCCCACACTCCCATGCAGCACCT i macFas5.chr19 I 1 T 10658 s papAnu2.chr19 47221055 26 + 51301725 -AGTTCCCACACTCCCATGCAGCACCT i papAnu2.chr19 I 1 T 11279 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45542204 32153 + 49145316 T e chlSab2.chr6 46937017 10403 + 50890351 T e rheMac3.chr19 60107721 10691 + 64156825 T a score=3797.000000 s hg38.chr19_GL949753v2_alt 222821 17 + 796479 ttgaccacagactgaag s panTro4.chr19 59157668 17 + 63644993 ttgaccacagactgaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798565 16 - 106955855 ttgaccacagactgaa- i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45542204 32153 + 49145316 T e chlSab2.chr6 46937017 10403 + 50890351 T e papAnu2.chr19 47221081 11279 + 51301725 T e macFas5.chr19 55135397 10658 + 59248254 T e rheMac3.chr19 60107721 10691 + 64156825 T a score=327530.000000 s hg38.chr19_GL949753v2_alt 222838 192 + 796479 ggctgcactgtcggcttctcggcttctgaggttttggtactcggactagcttccttgctcctcagcttacagacagtctattgtgggacctcaccttgtgatcgtg----tggatcaatactccttaataaactcccctttatatatacatctatcctgttagttctgcccctctagagaaccctgactaatac---aT s panTro4.chr19 59157685 192 + 63644993 ggctgcactgtcggcttctctgcttctgaggttttggtactcggactagcttccttgctcctcagcttacagacagtctattgtgggacctcaccttgtgatcgtg----tggatcaatactccttaataaactcccctttatatatacatctatcctgttagttctgcccctctagagaaccctgactaatac---aT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798581 192 - 106955855 ggctgcactgtcggcttctctgcttctgaggttttgagactcagactagcttccttgctcctcagcttacagacagtctatcgtgggacctcaccttgtgatcgtg----tgaatcagtactccttcataaactcccctttatatatacatctatcctattagttctgcccctccagagaaccctgacgaatac---GT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60097030 199 + 64156825 ggctgCACTGtcagcttctcaacctctgaggttttcggacttggatgggcttccttgctcctcagcttgcagacggtctattgtgacacctcaccttgtgatcgtgtgaatgaatcaatactccttaatcaactcccctttatacatacacctatcccattagttctgcccctctagagaaccccgactaatacaTAAT i rheMac3.chr19 T 10691 C 0 s macFas5.chr19 55124739 195 + 59248254 ggctgCACTGtcagcttctcaacctctgaggttttcggacttggatgggcttcctcgctcctcagcttgcagacggtctattgtgacacctcaccttgtgatcgtg----tgaatcaatactccttaatcaactcccctttatacatacacctatcccattagttctgcccctctagagaaccccgactaatacaTAAT i macFas5.chr19 T 10658 C 0 s papAnu2.chr19 47209802 195 + 51301725 ggctgcacTGTCAACTTCTCAGCCTCTGAGGTTTTCGGACTTGGAAGGGCTTCCtcgctcctcagcttgcagacggtcTATTGTGACACCTCACCTTGTGATCGCG----TGAATCAATACTCCTTAATCAACTCCCCTTTATACGTACATCTATCCCATTAGTTCTGCCCCTCTAGAGAACCCCGACTAATACATAAT i papAnu2.chr19 T 11279 C 0 s chlSab2.chr6 46926614 195 + 50890351 ggctgcactgtcagcttctcagcctctgaggttttcggacttggacgggtttcctcgctcctcagcttgcagacggtctattgtgacacctcaccttgtgatcgtg----tgaatcaatactccttaatcaactcccctttatacatacatctatcccattagttctgcccctctagagaaccccgactaatacaTAAT i chlSab2.chr6 T 10403 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I e calJac3.chr22 45542204 32153 + 49145316 T a score=767827.000000 s hg38.chr19_GL949753v2_alt 223030 351 + 796479 GTTTCTGAAATACGCAGCCATAG------AAGGAAATGAGAAATGAAACTTCCTGACACAGGCAGGAAACCTCAGGAAGCAGC-GAGGTCAGAGCTGAGTTGGCTTCTGGTGACTTGCAATGTCAGGGAATCACTAAAAGGGAGGTTTCCGCCTCTATATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGGTTGGGGTTTTGGGTGAAAGTGGGAAGTTGTGGCTCCTCGTCCCCTGTGTTTGTGGATGGCACTGGGGTATCTCTGCTCATTGACTCAGGTTTATGGTCAGCCCTGAGCCTCCCCCTC--TGTGTGTGTGAAATAGATTCATTGTAGAGTTGTCAGACA s panTro4.chr19 59157877 351 + 63644993 GTTTCTGAAATACGCAGCCATAG------AAGGAAATGAGAAATGAAACTTCCTGACGCAGGCAGGAAACCTCAGGAAGCAGC-GAGGTCAGAGCCGAGTTGGCTTCTGGTGACTTGCAATGTCAGGGAATCACTAAAAGGGAGGTTTCCGCCTCTATAAGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGGTCGGGGTTTTGGGTGAAAGTGGGAAGTTGTGGCTCCTCGTCCCCTGTGTTTGTGGATGGCACTGGGATATCTCTGCTCATTGACTCAGGTTTATGGTCAGCCCTGAGCCTCCCCCTC--TGTGTGTGTGAAATAGATTCATTGTAGAGTTGTCAGACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102798773 350 - 106955855 GTTTCTGAAATACGCAGCCGTAG------AAGGATATGAGAAATGAAACTTCCTGACACAGGCAGGAAACCTCAGGAAGCAGC-GAGGTCAGAGCCGAG-TGGCTGCTGGTGACTTGCCATGTCAGGGAATCACTAAAAGGGAGGTTTCCGCCTCTATATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGGTCGGAGTTGTGGGTGAAAGTGGGAGGTTGTGGCTCCTCGTCCCCTGTGTTTGTGGAGGGCACTGGGATATCTCTGCTCATTGACTCAGGTTCATGGTCAGCCCTGAGCCGCCTCCTC--CGTGTGTGTGAAACAGATTCATTGTAGAGTTGTCAGACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60097229 352 + 64156825 GTTTCTGAAATACGCAGCCCTAG------AAGGAAATGAGAAATGAAACTTCCTGACACCGGCAGGGAACCTCAGGAAGCAGC-GAGCTCAGAGCCGAG-TGGCTGCTGGTGACTTGCAATGTCAGGGGGTCACTAAGGGGCACGTTTCTACTTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGCTCGGGGTTTTGGGTGAAAGTGGGACGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATAGCACTGGGATATCTCTGCCCATTGACTGAGGTTCATGGTCAGCCTTGAGCTGCCTCCTCCATGTGTATGTGAAGCAGATTCACTGTAGACTTGTTAGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55124934 352 + 59248254 GTTTCTGAAATACGCAGCCCTAG------AAGGAAATGAGAAATGAAACTTCCTGACACCGGCAGGGAACCTCAGGAAGCAGC-GAGCTCAGAGCCGAG-TGGCTGCTGGTGACTTGCAATGTCAGGGGGTCACTAAGGGGCACGTTTCTACTTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGGTCGGGGTTTTGGGTGAAAGTGGGACGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATAGCACTGGAATATCTCTGCCCATTGACTGAGGTTCATGGTCAGCCCTGAGCTGCCTCCTCCATGTGTGTGTGAAGCAGATTCACTGTAGACTTGTCAGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47209997 352 + 51301725 GTTTCTGAAATACGCAGCCCtag------aaggaaatgagaaatgaaactTCCTGACACCGGCAGGGAACCTCAGGAAGCAGC-AAGCTCAGAGCCGAG-TGGCTGCTGGTGACTTGCAATGTCAGGGGGTCACTAAGGGGCACGTTTCTACTTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTCAGGGAGGGGTCGGGGTTTTGGGTGAAAGTGGGACGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATAGCACTGGGATATCTCTGCCCATTGACTGAGGTTCATGGTCAGCCCTGAGCTGCCTCCTCCATGTGTGTGTGATACAGATTCACTGTAGACTTGTCAGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46926809 352 + 50890351 GTTTCTGAAATACGCAGCCCTAG------AAGGAAATGAGAAATGAAACTTCCTGTCACAGGCAGGGAACCTCAGGAAGCAGC-GAGCTCAGAGCCGAG-TGGCTGCTGGTGACTTGCAATGTCAGGGGGTCACTAAGGGGCACGTTTCTACTTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGTTAGGGAGGGTTCGGGGTTTTGGGTGAAAGTGGGACGTTGTGGCTCTTCCTCCCCTGTGTTTGTGGATAGCACTGGGATATCTCTGCCGATTGACTGAGGTTCATGGTCAGCCCTGAGCTGCCTCCTCCATGTGTATGTGAAACAGATTCACTGTAGACTTGTCAGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45510051 364 + 49145316 GTTTCTGAAATATGTAGCCATGGTCCTATGAAGAAATGAGAAATGAAACTTCCTGACACAGGCCGGAAACCTTAAGAAGCAGCAGAGGCCAGAGCTGAG-TGGCTGCTGGTGACTTGCAATGTCAAGGGGTGACTAAGGGGGAAGTTTTGATCTCTGTGTGAGATAGAAGAGAGCCCCAGGCCCAGGGACCCCACAGACAGGAAAGTGTCAGGATTTCAAATGAAGGACAGAAGCGGTGGCTTCTCCTCCTCTGTGTTTGTGGATGGCACTGGAATACCTCTACTT-TTGACTCAGGTCTATGGTCAGACCTGAGCTGCCTTCTCCATGTGTGTGTGAAACAGATTCACTGCAGCATTATCAGACA i calJac3.chr22 T 32153 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4173909 116 - 60714840 I a score=87147.000000 s hg38.chr19_GL949753v2_alt 223381 30 + 796479 -------------------------TGAGGTTCACACTGGACCCTCCCCTGCTGG s panTro4.chr19 59158228 30 + 63644993 -------------------------TGAGGTTCACACTGGACCCTCCCCTGCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4174025 30 - 60714840 -------------------------TGAGGTTCACACTAGACCCTCCCATGCTGG i ponAbe2.chr19 I 116 I 36675 s nomLeu3.chr10 102799123 30 - 106955855 -------------------------TGAGGTTCACACTGGACCCTACCCTGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60097581 30 + 64156825 -------------------------TGAGGTTCACACTGGACCCTCCCCTGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55125286 30 + 59248254 -------------------------TGAGGTTCACACTGGACCCTCCCCTGCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47210349 30 + 51301725 -------------------------TGAGGTTCACACCGGACCCTCCCCTGCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46927161 30 + 50890351 -------------------------TGAGGTTCACACTAGACCCTCCCCTGCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45510415 55 + 49145316 TCAGTGTCTGTCCCACATGTGAGTCTGAGGCTCACATTGGACCCTCCCTTGCTAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I a score=742322.000000 s hg38.chr19_GL949753v2_alt 223411 351 + 796479 TTACAGGCCTGAGCAGACTCACAAGACCCGGGCAGGTGGTGCCGTCCTCCTCTTTTCAAGCC-TAACGCCCAGTGCAGCCCTGGTAGAAACCCTCTCTGGCAGATGAGGCACTG--GGAGATGAGTGTCCAAGAATGAGAAGAAAGAGGAATCATCCTAATGATAAAAAGTGCTATGACTGGCTGCCTgcgatggctcacgcctat-tttcccagcgctctgggaggccgaggtgggcagatcgctggagcccaggagttcgagaccagcctgggcaacatggtgaaaccccatctctactaaaaagacaaaaa--------------tgaactgggtgtggtggtgcacacctgtagttccagctact s panTro4.chr19 59158258 351 + 63644993 TTACAGGCCTGAGCAGACTCACGAGACCCGGGCAGGTGGTGCCTTCCTCCTCTTTTCAAGCC-TAACGCCCAGTGCAGCCCTGGTAGAAACCCTCTCTGGCAGATGAGGCACTG--GGAGATGAGTGTCCAAGAATGAGAACAAAGAGGAATCATCCTAATGATAAAAAGTGCTATGACTGGCTGCCTgtgatggctcacgcctat-tttcccagcgctctgggaggccgaggtgggcagatcgctggagcccaggagttcgagaccagcctgggcaacatggtgaaaccccatctctactaaaaagacaaaaa--------------tgaactgggtgtggtggtgcacacctgtatttccagctact i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102799153 351 - 106955855 TTACAGCCCTGAGCAGACTCACGAGACCCGGGCAGGTGGTGCCTTCCTCCTCTTTTCAAGCC-TAACTCCCAGTACAGCCCTGGTAGAAACCCTCTCTGGCAGATGAGGCACTG--GGAGGTGAGTGTCCAAGAATGAAAAGAAAGAGGAATCATCCTAATGATAAAAAGTGCTATGACTGGCTGCCTgcgatgactcacgcctat-tttcccagagctctgggaggccaaggtgggcagatcgctggagcccaggagttcgagaccagcctgggcaacatggtgaaaccccatctctactaaaaagacaaaaa--------------tgaaccgggtgtggtggtgcacacctgtagttccagctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60097611 350 + 64156825 TTACAGCCCTGAGCAGACTCTCGAGACCCAGGCAGGTGGTGCCTTCCTCCCCTTTTCAAGCC-TAACTCCCAGTACAGCCCTGGTAGAAACCCTCTCTGACAGATGAGATGCTG--GGAGGTGTGTGTCCAAGAATGAGAAGAAAGAGGAATCATCCTAATGATAACAAGTGCTATGACTGGCTGCCTGCCAtggctcatgcctat-tttcccagcactctgggaggccgaggtagacagatcgctggagcccaggagttcgagaccag-ctgggcaacatggtgaaactccatgcatactaaaaagacaaaaa--------------ataactgggtgtggtggtgcatacctgtagttccaggtact i rheMac3.chr19 C 0 I 6541 s macFas5.chr19 55125316 350 + 59248254 TTACAGCCCTGAGCAGACTCTCGAGACCCAGGCAGGTGGTGCCTTCCTCCCCTTTTCAAGCC-TAACTCCCAGTACAGCCCTGGTAGAAACCCTCTCTGACAGATGAGATGCTG--GGAGGTGTGTGTCCAAGAATGAGAAGAAAGAGGAATCATCCTAATGATAACAAGTGCTATGATTGGCTGCCTGCCAtggctcatgcctat-tttcccagcactctgggaggccgaggtagacagatcgctggagcccaggagttcgagaccag-ctgggcaacatggtgaaactccatgcatactaaaaagacaaaaa--------------ataactgggtgtggtggtgcatacctgtagttccaggtact i macFas5.chr19 C 0 I 6687 s papAnu2.chr19 47210379 350 + 51301725 TTACAGCCCGGAGCAGACTCTCGAGACCCAGGCAGGTGGTGCCTTCCTCCCCTTTTCAAGCC-TAACTCCCAGTACAGCCCTGGTAGAAACCCTCTCTGACAGATGAGATGCTG--GGAGGTGTGTGTCcaagaatgagaagaaagaggaatCATCCTAATGATAACAAGTGCTATGATTGGCTGcctgccatggctcatgcctat-tttcccagcactctgggaggccgaggtagacagatcgctggagcccaggagttcgagaccag-ctgggcaacatggtgaaactccatgcatactaaaaagacaaaaa--------------ataactgggtgtggtggtgcatacctgtagttccaggtact i papAnu2.chr19 C 0 I 6657 s chlSab2.chr6 46927191 350 + 50890351 TTACAGCCCTGAGCAGACTCTCGAGACCCGGGCAGGTGGTGCCTTCCTCCCCTTTTCAAGCT-TAACTCCCAGTACAGCCCTGGTAGAAACTCTCTCTGACAGATGAGATACTG--GGAGGTGTGTGTCCAAGAATGAGAAGAAAGAGGAATCATCCTAATGATAACAAGTGCTATGATTGGCTGCCTGCCAtggctcatgcctat-tttcccagcactctgggaggctgaggtggacagatcgctggagcccaggagttcgagaccag-ctgggcaacatggtgaaactccatgcatactaaaaagacgaaaa--------------ataactgggtgtggtggtgcatacctgtagttccaggtact i chlSab2.chr6 C 0 I 5867 s calJac3.chr22 45510470 365 + 49145316 GCAAAGCCCTGAGCGGACTCATGTGACACTGGCAGGTGGAACCAT-CTCCCCTTTTCAAGCTGTAACTCCCAGCACAGCCCTGGTAGAAATCCTGCCTGACAAATAAGGC-CTGTTGGGGGCGAGTGTCTAAGAATGACAAGAAGGAGGAATCATCCTAATGATCAAAAGTGCTATGATTggccaggtgctgtggctcacacctgcactttccagcacttcgagacgtcaaggcaggcgggtcacttgaggccaggggttcaagaccagcctgggcaacatgacaaaacgtcatctgta--aaaaaATTAGCGGGTGGGTCGTTCTTTTGAgctgggcattgtagctcatggctataatcccagcactt i calJac3.chr22 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I a score=51342.000000 s hg38.chr19_GL949753v2_alt 223762 178 + 796479 taggagcctgaggtcga-agatcgcttgagtctggcaggcggaggttgcagtgaactggggtggtgcgccactgcactttagcctgggtgacagagcaagaacctgtctc---aaaaa---caaaCACAggctgggcgtggtggctcacgcctgtaatcccagcacttt--------gggaggccgaggcagg s panTro4.chr19 59158609 178 + 63644993 taggagtctgaggtcga-agatcgcttgagtctggcaggcggaggttgcagtgaactggggtagtgcgccattgcactttagcctgggtgacagagcaagaccctgtctc---aaaaa---caaaCACAggctgggcgtggtggctcacgcctgtaatcccagcacttt--------gggaggccgaggcagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102799504 184 - 106955855 taggagtctgaggtcaa-agatcgcttgagtctggcaggcggaggttgcagtgaactggggtagtgcaccactgcactttagcctgggtgacagagcaaga--ctgtctc---aaaaa---caaaCACAggccgggcgtggtggctcacgtctgtaatcccagcactttggggtttgggggggccgaggcagg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45510835 149 + 49145316 tgggag---gaggcaggcggattgcttaagctcagaaatttgaga---------------------------------ccagtctggacaatatggtaaaacccaacctctataaaaatgtcaaaagctagctgagcatggtgatgtgtacctgtagtcccatatactc--------aggaggctgaggtggg i calJac3.chr22 C 0 I 28345 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e chlSab2.chr6 46927541 5867 + 50890351 I e papAnu2.chr19 47210729 6657 + 51301725 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=216035.000000 s hg38.chr19_GL949753v2_alt 223940 838 + 796479 cagatcatgaggtcaagagatcgagaccatcctggccacacggtgaaaccccatctctactaaaaatac------aaaaaaaaaa--------aaaaaaaaagattagctggttgtggtggcgggcacctgtagtcccagctactcgggaggctaaggtaggagagttgcttgaactcaggagacagaggttgcagtgagctgagatcacgccactgcactctagcctgggtgacagagtgagactccgtctcaaaaaataaataaataaataaata----aaaaCAAAAAACAAACCAAAAAATCAAACACAAAGTGCTATGGTTGACAATCCACACTCACTAATGAGGATTATCATGGTCAAAAGGAGTACTAGGAATGTGTGAGACCCATCTTAGGTtaaacatgtttaaatatttgagaaatacagaggacattgaatttctgaggcaggattatatgatttttttttctacagcagaatgaatattatataaaataattagaagacatagaaaaatcagatttaatgaacacaatcaaaatactcattccttcgaggacaagacacagtgaagcaccaattatgaaattagaaaacaaaacagaattttttttagagtgtagcatagaaactttataaattgcaatttaaagtacttgggagaatagaatgaggagggggaatgtcctatctattgtaggcgtcagaaagaaggaagagaaaacgatgtctagcaatagcccaagaggtgagtagctgaacattttatagagatgaggagagacTAACTAAGGACTAGGGCGCATCCCTTTAAAATTGAAATGTATGggctggacgtggtggctcacgcct s panTro4.chr19 59158787 848 + 63644993 cagatcatgaggtcaagagatcgagaccatcctggccacacggtgaaaccccatctctactaaaaatacaaaaaaaaaaaaaaaa--------aaaaaaaaagattagctggttgtggtggcgggcacctgtagtcccagctacttgggaggctaaggtaggagagttgcttgaactcaggagacagaggttgcagtgagctgagatcacgccactgcactctagcctgggtgacagagtgagactccgtctcaaaaaataaataaataaataaataaatgaaaacaaaaaacaaaccaaaaaaTCAAACACAAAGTGCTATGATTGACAATCCACACTCACTAATGAGGATTATCATGGTCAAAAGGAGTACTAGGAATGTGTGAGACCCATCTTCGGTtaaacatgtttaaatatttgagaaatacagaggacattgaatttctgaggcaggattatatgatttttttttctacagcagaatgaatattatataaaataattagaagacatagaaaaatcagatttaatgaacacaatcaaaatactcattccttcgaggacaagacacagtgaagcaccaattatgaaattagaaaacaaaacataattttttttagagtgtagcatagaaactttataaattgcaatttaaagtacttgggagaatagaatgaggagggggaatgtcctatctattgtaggtgtcagaaagaaggaagagaaaatgatgtctagcaatagcccaagaggtgagtagctgaacattttatagagatgaggaaagacTAACTAAGGACTAGGGCGCATCCATTTAAAATTGAAATGTATGggctggacgtggtggctcacgcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102799688 844 - 106955855 cagatcatgaggtcaagagatcgagcccatcctggccacatggtgaaaccccatctctagtaaaaatacaaaaaaaaaaaaaaaaaaagaaagaaagaaaaaaattagctgggtgtggtggccggcacctgtagtcccagctactcgggaggctaaggtaggagagttgcttgaactcaggaggcagaggttgcagtgagctgagattacgccactgcactccagcctgggtgacagagtgacaatccatctcaaaaaataaataaataaatac-------aaacaaaaaAACAAATAAAAAAATCAAACACAAAGTGCTATGATTAACAATCCACACTCATTAATGAGGATTATCATGGTCAAAAGGAGTACTCGGAATGTGTGAGACCCATCTTAGGTtaaacatgtttaaatatttgagaaatacaaaggacactgaatttctgaggcaggattatatgattcttttttctacagcagaatgaatattatataaaagaattagaagacatagaaaaatcagatttaatgaacacaatcaaaatactcattccttcgaggacaagacacagtgaagtaccaattatgaaatcagaaaacaaaacagaa-tttttttagagtgtagcatagaaa-tttataaattgcaatttaaagtacttgggag---agaatgaggagggggaatgtcctatctattgtaggtgtcagaaagaaggaagagaaaacggtgtctggcagtagcccaagaggtgagtagctgatcattttacagagatgaggaaagacTAACTAAGGACTAGGGCGCATCCATTTAAAATTGAAATGTACGggccgggcgtggtggctcacgcct i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e chlSab2.chr6 46927541 5867 + 50890351 I e papAnu2.chr19 47210729 6657 + 51301725 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=15716.000000 s hg38.chr19_GL949753v2_alt 224778 43 + 796479 gtaagcccagcactttgggaggctgaggcgggcggatcacctg s panTro4.chr19 59159635 43 + 63644993 gtaagcccagcactttgggaggctgaggtgggcggatcacctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102800532 41 - 106955855 gtaatcccagcac--tgggaggccgaggcaggcggatcacctg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47217386 41 + 51301725 gtaatcccaccactttgggagaccgtggagggtggatcaca-- i papAnu2.chr19 I 6657 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e chlSab2.chr6 46927541 5867 + 50890351 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=33672.000000 s hg38.chr19_GL949753v2_alt 224821 46 + 796479 aggtcgggagtttgagaccagcctgaccaacatggagaaaccctgt s panTro4.chr19 59159678 46 + 63644993 aggtcgggagtttgagaccagcctgaccaacatggagaaaccctgt i panTro4.chr19 C 0 I 4990 s nomLeu3.chr10 102800573 46 - 106955855 aggtcaggagtttgagactagcctgaccaacatggagaaatgctgt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47217427 46 + 51301725 aggtcaggagttcaagaccagccaggccaagatggtgaaaccccat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933408 46 + 50890351 aggtcaggagttcaagaccagccaggccaagatggtgaaaccccat i chlSab2.chr6 I 5867 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=127704.000000 s hg38.chr19_GL949753v2_alt 224867 195 + 796479 ctctactaaaaatacaaaaattagccgggcgtggtggcaggtgcctgtagtcccagttactcgggagactgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcactccactgtactccagcctggtga--tagagcgagactccgtctcaaaaaaca-aaacaaaacaaaacaaaaa s panTro4.chr19 59164714 195 + 63644993 ctctactaaaaatacaaaaattagccgggcgtggtggcaggcaactgtagtcccagttactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcctggtga--cagagcgagactctgtctcaaaaaaca-aaacaaaacaaaacaaaaa i panTro4.chr19 I 4990 C 0 s nomLeu3.chr10 102800619 196 - 106955855 ctctactaaaaatac-aaaattagcggggcatgatggcacatgcctgtaatcccagttacttgggaggctgaggcaggagaatcatttgaacccgggaggcggaggttgtggtgagccgagatagagccattgcactccaccctgggcaacaagagcgaaactccatctcaaaataaa-taaataaataacaaataaa i nomLeu3.chr10 C 0 I 19200 s papAnu2.chr19 47217473 187 + 51301725 ctctactaaaaatacaaaaattagccaggtgtggtggtgggcacctgtagtcccagttacttgggaggctgaggcaggagaatggtgtgaacctgggaggtggagcttgcagtgagtggagattgtaccactgcactccagcctggtga--cagagcgagactccatctcaaaaaaaatttaaaaaaaa--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933454 186 + 50890351 ctctactaaaaatacaaaaattagccaggtgtggtggtgggcacctgtagtcccagttacttgggaggctgaggcaggagaatggcgtgaacctgggaggtggagcttgcagtgagtggagattgtaccactgcactccagcctggtga--cagagcgagactccatctcaaaaaaaa-ttataaaaaa--------- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=60031.000000 s hg38.chr19_GL949753v2_alt 225062 119 + 796479 CCCTCACAC-AAAAACCAAGacaaatccccttgacacaagtttatctgtctaacaaacctgcacatgtatccctgaacttaaaagtgaaaaaaataaaGGCaatatgtgtcagatttgtg s panTro4.chr19 59164909 119 + 63644993 ccctcacac-aaaaaccaaaacaaatccccttgacacaagtttatctgtctaacaaacctgcacatgtatccctgaacttaaaaGTGAAAAAAATAAAGGCaatatgtgtcagatttgtg i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47217660 120 + 51301725 gccacacacaaaaaaacaaaacaaatccccttgacacaagtttatctatctaacaaacctgcacatgtatccctgtacttaaaagtgaaaaaaataaaggcaatatgTGTCAGATTTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933640 120 + 50890351 accacacacaaaaaaccaaaacaaacccccttgacacaagtttatctatctaacaaacctgcacttgtatccctgtacttaaaagtgaaaaaaataaaGGCaatgtgtgtcagatttgtg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e nomLeu3.chr10 102800815 19200 - 106955855 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=11381.000000 s hg38.chr19_GL949753v2_alt 225181 18 + 796479 gtggtgtctgctgtttca s panTro4.chr19 59165028 18 + 63644993 gtggtgtctgctgtttca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102820015 18 - 106955855 gtaggatctgcttcttca i nomLeu3.chr10 I 19200 C 0 s papAnu2.chr19 47217780 18 + 51301725 GTGCTGTCTGCTGTTTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933760 18 + 50890351 gtgctgtctgctgtttcg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e macFas5.chr19 55125666 6687 + 59248254 I e rheMac3.chr19 60097961 6541 + 64156825 I a score=9575.000000 s hg38.chr19_GL949753v2_alt 225199 7 + 796479 cccccat s panTro4.chr19 59165046 7 + 63644993 cccccat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102820033 7 - 106955855 ctcccat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60104502 7 + 64156825 CCCCCAT i rheMac3.chr19 I 6541 C 0 s papAnu2.chr19 47217798 7 + 51301725 CCCCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933778 7 + 50890351 cccccat i chlSab2.chr6 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 102998347 0 + 122678785 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e macFas5.chr19 55125666 6687 + 59248254 I a score=165010.000000 s hg38.chr19_GL949753v2_alt 225206 131 + 796479 atggaaatgtgtgcctgaaccccgcttttttccttgcttattgtggctaggatttgtgaatgtaattcacattctcaagaatgagcttttttggcttcatcgagttttcacgtagc--------cctcattagtaactc s panTro4.chr19 59165053 139 + 63644993 atggaaatgtgtgcctgacccccgcttttttccttgcttattgtggctaggatttgtgaatgtaattcacattctcgagaatgagcttttttggcttcatcgagttttcacgtagttgttttgtcctcttaagtaactc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102820040 129 - 106955855 atggaaacgcgtgcctg---------ctctttctttctcagtctagttaggattcatgagtataattaatattttcaagaatgagcttcactggctatgttgaattttcaagtttt-ggtttttcctcatgagcaactc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60104509 139 + 64156825 ATGGAAATGGGTGCCTGACCCCTGcttttttccttgcttatcgtggctaggatttgtgaatgtaattaccattctcaagaatgagcttttttggcttcattgagttttcacgtagttgttttgtcctcattagtaactc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47217805 138 + 51301725 ATGGAAATGTGTGCCTGACCCCTGCTTTTTTCCTTGCTTATTGTGGCTAGGATTTGTGAATGTAATTACCATTCTCAAGAATGAG-TTTTTTGGCTTCATTGAGTTTTCAGGTAGTTGTTTTGTCCTCATTAGTAACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933785 138 + 50890351 atggaaatgtgtgcctgacccctgcttttttccttgcttattgtggctaggatttgtgagtgtaattaccattctcaagaatgag-ttttttggcttcattgagttttcacgtagttgttttgtcctcattagtaactc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19700558 137 - 122678785 atggtgatgtaagcctt-ctttctctatgttccttgggtgttgtagctaggatttatacatgtgattaatatttgcaaaaatgaa-ggttttagatttattgattcttctctatttttgtttgtcctcattagtagctt i canFam3.chr1 T 7163 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4174055 36675 - 60714840 I e calJac3.chr22 45510984 28345 + 49145316 I e macFas5.chr19 55125666 6687 + 59248254 I a score=112094.000000 s hg38.chr19_GL949753v2_alt 225337 60 + 796479 ctcttgttatttttgtccccttcctcacaccttcatttggaataatttgttgttcttttt s panTro4.chr19 59165192 60 + 63644993 ctcttgttatttttgtccccttcctcacaccttcatttggaataatttgttgttcttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102820169 57 - 106955855 ttcttcttattatt---ccctttcttacaccttcatttggaataatttgttattcttttt i nomLeu3.chr10 C 0 T 18970 s rheMac3.chr19 60104648 60 + 64156825 ctcttgttatttttgtccacttcctcacaccttcatttggaataatttgtcgttcttttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47217943 60 + 51301725 CTCTTGTTATTTTTGTCCACTTCCTCACACCTTCATTTGGAATAATTTGTCGTTCTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933923 60 + 50890351 ctcttgttatttttgtccacttcctcacaccttcatttggaataatttgtcgttcttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539329 57 + 49145316 ctcctgttgttattattcccttccttacaccttcatttggaataatttattcttctt--- i calJac3.chr22 I 28345 C 0 s canFam3.chr1 19700695 60 - 122678785 cttgtatcactataatttccctcctcttaccttcatttggaataatttgctattttttcc i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4174055 36675 - 60714840 I e macFas5.chr19 55125666 6687 + 59248254 I a score=40116.000000 s hg38.chr19_GL949753v2_alt 225397 40 + 796479 -ctaaattctttctgtcattgccaaggtcattaattacgta s panTro4.chr19 59165252 40 + 63644993 -ctaaattctttctatcattgccaaggtcattaattacgta i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60104708 36 + 64156825 -ctaaa----ttctatcattgccaaggtcattaattacgta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47218003 36 + 51301725 -CTAAA----TTCTATCATTGCCAAGGTCATTAATTACGTa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46933983 36 + 50890351 -ctaaa----ttctatcattgccaaggtcattaattacata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539386 40 + 49145316 -ctaaattcctgatttgaaagccaagatcattcatttccta i calJac3.chr22 C 0 C 0 s canFam3.chr1 19700755 36 - 122678785 cctaaattcttggtatgatagcttgggtcattgatt----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4174055 36675 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T e macFas5.chr19 55125666 6687 + 59248254 I a score=333875.000000 s hg38.chr19_GL949753v2_alt 225437 190 + 796479 ggttttattcttttctaattcattcgctc---atttgtagttttccgatttcatc-atttaatgtgtaatatttacattatcattccaaatttataccatgctctaatttctgtttcagttttctc----agctcattgatttattgagaagtctgtggcttc-atttcaaaaatgcaaggatattagtcatctttGAC s panTro4.chr19 59165292 190 + 63644993 ggttttattcttttctaattcattcgctc---atttgtagttttctgatttcatc-atttaatgtgtaatatttacattatcattccaaatttataccatgctctaatttctgtttcagttttctc----agctcattgatttattgagaagtctgtggcttc-atttcaaaaatgcaaggatattagtcatctttGAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60104744 188 + 64156825 ggttttattcttttctaattcattcactc---atttgtagttttccgatttcatc-atttaatgtgtaatatttacattatcattc--aatttataccattctctaatttctgttttagttttctc----agctcattgatttattgagaagtctgtggcttt-atttcaaaaatgcaaggatattagtcatctttAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55132353 188 + 59248254 ggttttattcttttctagttcattcactc---atttgtagttttccaatttcatc-atttaatatgtaatatttacattatcattc--aatttataccattctctaatttctgttttagttttctc----agctcattgatttattgagaagtctgtggcttt-atttcaaaaatgcaaggatattagtcatctttAAC i macFas5.chr19 I 6687 C 0 s papAnu2.chr19 47218039 188 + 51301725 ggttttattcttttctaattcattcactc---atttgtagTTTTCCGATTTCATC-ATTTAATGTGTAATATTTACATTATCATTC--AATTTATACCATTCTCtaatttctgttttagttttctc----AGCTCATTGATTTATTGAGAAGTCTGTGgcttt-atttcaaaaatgcaaGGATATTAGTCATCTTTAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46934019 188 + 50890351 ggttttattcttttctaattcattcactc---atttgtagttttccgatttcatc-atttaatgtgtaatatttacattatcattc--aatttataccattctctaatttctgttttagttttctc----agctcattgatttattgagaagtctgtggcttt-atttcaaaaatgcaaggatattagtcatctttAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539426 189 + 49145316 ggtttttttctcttctactttattcggttgtggtttttagtcttccaatt---tc-atttcgtgtgtaatatttatattgtgaca---agtttaaagcacattctgacttctgttttagttttctcaattaactcattaa-ttattgagaagtctgttgcttt-aactaaaaaatgtagagatattagttat-ttAGAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19700791 165 - 122678785 ------------------------------tggttcttaattttcccatttcataggtttgatgtgtaacatttacattatccctc--cgtgtaaa-cattgtctcatttccattttggttttctcattaaattcctgga-ttattgagaagtccactgctttaatttccatagtgtagggatattagctatctttGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4174055 36675 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=2052913.000000 s hg38.chr19_GL949753v2_alt 225627 812 + 796479 TGCAG-AATCTAGTGAGTCCCAGA-GTTCCCAGGATGTCCTGGTGGTCTTTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGGGGCAGCTCCTGTGCCTTCTGGAGTCTCTGAGTCTCCTTCTGTTGAGTATGAGATCTGGGTCCCCCGTGGGCTAGTGGATGGCCAGGGGGGC-GTAGATGCTGGGTTCAGCTGGAGGTTCCCTTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGTAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGG---GGAGAGTGAGAGGTAAGGAACGTGGTGG-GGGT-GGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTC-TCTCAGtgtccatctgtctgtcctcttctgcctgtctgtcctttgtgtcCAGGAATTCCCCAGACAGTGGGGAGGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCTCGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGG-----GTGTCCTTGAGTCCCCCTGACCTCCTGGAGTCAATTTTCCTCACTGTTCCCGGGGTGAT-----------------CCGATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctgctcctcactctg-accttgcccatttggctgcagcctcaca---ggccttcctgcaagagctcgctgctgcctgggggcctttgcacggctgtttcctct s panTro4.chr19 59165482 810 + 63644993 TGCAG-AATCTAGTGAGTCCCAGA-GTTCCCAGGATGTCCTGGTGGTCTTTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGGGGCAGCTCCTCTGCCTTCTGGAGTACCTGAGTCTCCT---GTTGAGTGTGAGATCTGGGTCCCCCGTGGGCTAGTGGATGGCCAGGGGGGC-GTAGATGCTGGGCTCAGCTGGAGGTTCCCTTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGAAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGG---GGAGAGTGAGAGGGAAGGAACGTGGTGG-GGGTCGGGGAGGCCTGGGGGTCTGGAGAGGAAAGGACTCACCTGAGTGTCCATCTGCCTGTCCTCTTCTGCCTGTGTGTCCTTTGTGTCCAGGAATTCCCCAGACAGTGGGGAAGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCTCGGCATATGTCACTGCCTGGGGGTCTTCATCACGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGG------TGTCCTTGAATCCTCCTGACCCCCTGGAGTCAATTTTCCCCACTGTTCCCGGGGTGAT-----------------CTGATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggctgctccctccctgtggttctggcctctgctcctcactctg-accttgcccatttggctgcagcctcacg---ggccttcctgcaagagctcgctgctgcctcagggcctttgcacggttgtttcctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4210730 809 - 60714840 tGCAG-AATCAGGTGACTCCCAAA-GTTCCCAGAATCTTCTAGTGGTC-TGGTCAGGGGTCTAAGCTGGCTGGGATTCAATGATGTCTGCTGGAGGCAGCTTCCATGCCTTCTGGGGT-CCTGAGTCTCC----ATAGTTTGTGGGGTCTGGGTCCCCCCTGGATTAGTGGATGGTCAGAGTGGC-ATAGACACTGGGCTCAGCTGGAGGTTCCCGTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGG---GGAGAGTGAGAGGGAAGGAACGTGGTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTAAGTGCCCATCTGCCTGTCCTCTTCTGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCAGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACGGGGGCATGTGTCACTGCCTGGGAGTCTCCTTCCTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGG-----GTGTCCTTGAGTCCCCCTGACCCCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CCGATGGCATTCCTTTCCTGATGGAATCT-CAGGGACACCCTAAGGCTGTGGAGggtctggccgctccctccctgtggttctggcccctcctcctcactctg-accttgcccatttggctgcagcctcagg--cggccttcctgcaagagctcgctgctgcctcggggcctttgcatggctgtttcctct i ponAbe2.chr19 I 36675 C 0 s rheMac3.chr19 60104932 799 + 64156825 TGCAG-AATCGAGTGAGTCCCAAA-GTTCCCAGGATATCCTAGTGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGCTGTCCACTGGGGGCAGCTCCCGTGCCTTCTGGAGTCCCTGAGTCTCCTTCTGTTGAGTGTAGGATCTGGGTCCCCCATGGGCTAGTGGATGGCCAGAGTCTC-AAAGACTCTGGGCTCAACTGGAGATTCCCCTTCCTGGGGTGGAGGAGGCTCAGTTGCCTCCCATCTCAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGG---GGAGAGTGAGAGGGAAGGAATGTGATGG-GGGTAGGGGAGGGCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCCTCTGCCTGTCCTCTTCCGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCCAGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGCCTCTGCTGGAGAAAGACACTGGTGGGGG-----GTG-----------------ACTCCTGGAGTCAATTTTCCTCACTGTTCCCAGGGTGAT-----------------CCGATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCGAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctaatg-cccgccttcctgcaagagcttgctgtggcctcggggcctttgcacggctgtttcttct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55132541 815 + 59248254 TGCAG-AATCGAGTGAGTCCCAAA-GTTCCCAGGATATCCTAGTGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGATGTCCACTGGTGGCAGCTCCCGTGCCTTCTGGAGTCCCTGAGTCTCCTTCTGTTGAGTGTAGGATCTGGGTCCCCCATGGGCTAGTGGATGGCCAGAGTCTC-AAAGACTCTGGGCTCAACTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGG---GGAGAGTGAGAGGGAAGGAACATGGTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTCACCTCAGTGTCCATCTGCCTGTCCTCTTCCGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCCGGGCGTACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACACTGGTGGGGG-----GTGTCCTTGAGTCCCCCTGACCCCCTGGAGTCAATTTTCCCCACTGTTCCCAGGATGAT-----------------CCGATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCGAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctcaca--cggccttcctgcaagagctcgctgctgcctcggggcctttgcacggctgtttcctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47218227 815 + 51301725 TGCAG-AATCGAGTGAGTCCCAAA-GTTCCCAGGATATCCTAGTGGTCTCTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGTGGCAGCTCCCATGCCTTCTGGAGTCCCTGAGTCTCCTTCTGTTGAGTGTAGGATCTGGGTCCCCCATGGGCTAGTGGATGGCCAGAGTCTC-AAAGACTCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCTGAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAgtggg---ggagagtgagagggaaggagcgtggt-g-gggtgggggaggcctgggggcctggagaggaaaggaCCAGCCTGAGTGTCCATCTGCCTGTCCTCTTCCACCTGTGTGTCCTTTGTGTCCAGGAATTCCTCggacagtggggagggaggggaggccaTTTCTCTCCTAGGTCTGGAGTGTT------TCACCCGGGCATATGTCACTGCCTGGGGGTCTTCATCGTGTGGTCTCTGCTGGAGAAAGACACTGGTGGGGG-----GTGTCCTTGAGTCCCCCTGACCCCCTGGAGTCAATTTTCCCCACTGTTCCCAGGGTGAT-----------------CCGATTACACCCCTTTCCTGATGGAATCT-CAGGGATGCCCTAAGGCCGTGGAGGGTCTGGCCGCTCCCTCCCTGTGGTTCTGGCCTCTCCTCCTCACTCTG-ACCTTGCCCATTTGGCTGAAGCCTCACG-CCCACCTTCCTGCAAGAGCTTGCtgctgcctcaggacctttgcacggctgtttcctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46934207 815 + 50890351 TGCAG-AATTGAGTGAGTCCCAAA-GTTCCCAGGATATCCTCGTGGTCTCTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGTGGCAGCTCCCGTGCCTTCTGGAGTCCCTGAGTCTCCTTCTGTTGAGTGTAAGATCTGGGTCCCCCATGGGCTAGTGGATGGCCAGAGTCTCAAAAGACTCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCTCAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTAGG---GGAGAGTGAGAGGGAAGGAACGTGCTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCAGCCTGAGTGTCCATCTGCCTGTCCTCTTCCACCTGTGTGTCCTTTGTGTCCAGGAATTCCTCAGACACTGGGGAGGGAGGAGAGGTCATTTCTCTCCTAGGTCCGGAGTGTT------TCACCTGGGCATACGTCACTGCCTGGGGGTCTTCATTGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGGG-----GTGTCCTTGAATCCCC--GACCCCCTGGAGTCAATTTTCCTCACTGTTCCCAGGATGAT-----------------CCGATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCTATGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctaatg-cccgctttcctgcaagagctcgctgctgcctcaggacctttgcacggctgtttcctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539615 816 + 49145316 TGCAGAAATCAAGTGAGTCCCAAC-ATCTCCAGAATGTCCTGGTGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGGGGCAGCTTACGTGCCTTCTGGAGTCCCTGAGTCTCCTTTCGTTG--TGTGGGGTCTGGGTCCTTCGTAGGCTAGTGGATGGCCAGAGTGGA-GTAGACACTGGGCTCAGCTGGAGGGGCCCCTTCCTGGAATGAAGGGGGCTCAGTTGCCTTCCGACTGAGGGTCAAGGTGTCCAGCTGGGCGTAGGTCACTTCCTGGGGGGTTTCAGATGCAGCAGCCTGCAGTGGGGGCGGAGAGTGAGAGGGAAGGAACATGCTGGAAGGTGGGTGAGGCCTGGGGGCCTGGAGAGGAAAGTATCTACCTGACTGTCCATCTGCCTGTCCTCTTCTGCCTGTTTGTGCTATGTGTCCAGGAATTTCCTGGACAGGGGGGAAGCAGGGGAGGCCATTTCTCTCTTAGGTCTGGAATGTT------TCACCTCAGCATAGGTCTTCGCCTGGGGGTCTTCATCATATGGGCTCTGCTCGAGACAGACAGTGGTGGGAG-----GTGTCCTTGAGTCCCCCTGACCTCCTCGAGTCAGTTTTCC-CACTGTTCCCTGAGTGAT-----------------CCCATTACATCCCTTTCCTGATGGAATCT-CAGGG-CGCCCTAAGGCTGTGGAGggtctggctactcccttcctgcggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctcacg-cccaccttcccacaagagctcactgcggcctcggggcc-ttgcactgctgtttcctct i calJac3.chr22 C 0 C 0 s canFam3.chr1 19700956 812 - 122678785 GGCAG-AATTGGGTGACTTGCAAAGGGTCCCAGGAGTTACTAGTGGTCTGTGTGAGGAGTCCAGGCTGGCTGG-------TAGCACCCACTATGGGCAGGTCCTGTGCCTTC-------CTTGGGTC-------------CGTGGGGTCTGGGTCCTTCCTGGGCTAGTGAATGGCCAGAGCAGC-ATACACGCTGGGCTCTGCTGGGGGCTCCCCTGACTGGGAGGGAGAGGATGCACTTGTCTTCTGTCTGAGGGTCAAGTGGTTCAGCTGAGCGTAGGTCACATCTGGGGGGGCGTCAGATGCAGCAGCCTGCAGCAGG---GGAGAGTGAGAGGGGAGGTTGGTGTTGG-GGTGGGGGGAAGCCAGGGTGATCAGAGAAGACAGGGCCCACCTGACTGTCCATCCACCTATCTTCCTCTGCTTGTCTGTCCTCTGAGTCCTGTAATCCTCCTGAAAGGGAGGAAGGAGGAGTGGCCAGGACCTGCCTGGGACTTGATCATTAGTAGCTCACCTGGGCGTACATGTCTCCATGGGGTTCTTCATCCTGTGTGTTCTTCTGCAGACAGACAGTGAGGGGGAGGTTTgtctccttgaattcactccatcacttc-agtcaatttgccacactgtggccagagtgatgctttcaaactttcaggcagattaggtcactttcctgctggactctgcagggacttcctga-gccttgaagcatgtga-tgttttctttctatggctctgg-ttctattcctgacactgtttcttgcccatttgccaccagccatatgacccatgttcctgaaaaaccatgttgttgcctcaggacctttgcac-----ttgctact i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=286414.000000 s hg38.chr19_GL949753v2_alt 226439 122 + 796479 gcctgcaggggctcgtccatcagaggatcgtgtgccccactctgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg s panTro4.chr19 59166292 122 + 63644993 gcctgcaggggctcgtccattagaggatcatgtggccccctccgtccaggcgtctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4211539 122 - 60714840 gcctgtaggggctcgtccattagaggaccgtgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60105731 120 + 64156825 gcctgcagggactcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctta-cattcagactggccccactgccccaca--ctctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55133356 123 + 59248254 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttaccattcagactggccccactgccccacactctctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47219042 120 + 51301725 gcctgcagGGGCTCGTCCATTAGAGGATCCTGTGGCCCCCTCCGTCCAGGCTTCTCAGATGACAGCTGAGCAGAGAGCCCTCGCCTTA-CATTCAGACTGGCCCCACTGCCCCACA--CTCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46935022 120 + 50890351 gcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctta-cattcagactggccccactgcccccca--ctctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540431 123 + 49145316 acctgcaggggctcgtccattagaggatggtgtggccctctccgtccaggcttctcagatgacagctgaccagacagccctcgccttaccattcagactggccccactgccctgcactctctg i calJac3.chr22 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 19701768 0 - 122678785 C e nomLeu3.chr10 102820226 18970 - 106955855 T a score=2313478.000000 s hg38.chr19_GL949753v2_alt 226561 987 + 796479 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacgatgca-tttatttgcattttgtctccca-ccatgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccatggggagccccatccacagtgagctccctgggaacactcgctggttgaatgaatGAAGGGGAGCCTGGGGGACCG-GGGTGGTTCATTTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACAACCAGACGGCCAAACAGAGGATGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCACGAGGTCCCAGGACAGCAGAAGAGAGTGAGGTCGCAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGGGGTCCACCGTGACGATGCTGAGAGCCGGGGGAAGGAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGCCTCACCCGAGCATCCATCTCCACCCCGTCCTTGGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGCCAGAGCAAGGGGTTCGTCTCCTGGGAAGGTTCTCTGAGACTTCTCAGTCCTGCCAGCCCTTGCCCTGTTCCCA-CTAGGGTGGCTGAGATCCAGGG-----AGGGACTGTGATGTCC----CTGAGGTCCCACAGTGTGGGTTCAGACCACCTCCCCCTTGGCCCCAGACCCCTCCCAGCCTGTGCTCCTGCCCCCATTGCTACAGAAACTTTGGTGCTCCCTTGCCCACCCCAGGTG----CCCTCCGCTTCTAGTCACTCACTGAGAATTTCCTCCTGGATGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGAGGGGCAGTGAGGGGGCTGTGCGGGTGGATGGGAGTCT-TGGGTCTTCATGCA-GAATTACCTCTTCTGCAGGCCCTGGTCCTTGGGCTCTGGCCCCGCAGCCCCTGCAGGACGGTAGAAA s panTro4.chr19 59166414 985 + 63644993 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacggtgca-tttatttgcattttgtctccca-ccatgaggtgagctca-gga-ggcgggggtggctttgctccctgctgtgtctgcagctcccacggggagccccatccacagtgagctccctgggaacacttgctggatgaatgaatGA-GGGGAGCCTGGGGGACCG-GGTTGGTTCATTTATTCCT-CATCCTCctgaggcctgggga-gtgctctaactaccagatggccaaacagaggatgaggagcaggaaggggacccgggaggaggcccacgaggtcccaggacagcaggagagagtgaggtcgcagcaggcgggaggcagcgtgctggacaaggaggggtccaccgtgacaatgctgagagccgggggaaggaggacagagaagtcc-tgcaggattagatctggcaccaggaggcctttggtgcccgggacaggggcggGGCCTCACCCGAGCGTCCATCTCCGCCCCGTCCTTGGGCTGTGTGTCCTTCACAGCAGCATCTGCTGGGCCAGAGCAAGGGGTTCATCTCCTGGGAAGGTTCTCTGAGACCTCTCAGTCCTGCCAGCCCTTGCCCTGTTCCCA-CTAGGGTGGCTGAGATCCAGGG-----AGGGACTGTGATGTCC----CTGAGGTCCCACAGTGTGGGTTCAGACCACCTCCCCCTTG-CCCCAGACCCTTCCCAGCCTGTGCTCCTGCCCCCATTGCTACAGAAGCTTTGGTGGCCCCTTGCCCACTCCAGGTG----CCCTCTGCTTCTAGTCACTCACTGAGAATTTCCTCCTGGGTGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGAGGGGCAGTGAGGGGGCTGTGCGGGTGGATGGGAGTCT-CGGGTCTTCAGGCA-GAATTACCTCTTCTGCAGGACCTGGTCCTTGGGCTCTGGCCCCGCAGCCCCTGCAGGACGGTAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4211661 988 - 60714840 ccctttccctggtttatgttcctta-cagcacgttgcactcctggacacagtgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagcaaccatggggagcccgatcctcagtgagctccgtgggaacactcgctggttgaatgaatGAAGGGGAGCCCAGGGGACCA-AGGTGGTTCATTTATTCCT-CATCTTCCTGAGGCCTGGGGA-GCGCTCTAACAACCACAGGGCCAAACAGAGGATGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCACGAGGTCCCAGGACACCAGGAGAGAGTGAGGTCCCAGCAGGCGGGAGGCAGCATGCTGGACAAGGAGGGGTCCACCATGACGATGCTGAGAGCCGGGGGAAGGAGGACAGAGAAGTCC-TGCTGGATTAGATCTGGCACCAGGAGGCCTTTCGTGCCCGGGACAGGGGAGGGGCCTCACCCGACTGTACAGCTCCACCCCATCCTCAGGCTGTGTGTCCTTCATGGCAGCATCTGTTGGGCCAGAGCAAGGGGTTCGTCTCCTGGGAAGATTCCCTGGGACCTCTCATTCCTGCTGGTCCCTGCCCTGTTCCCA-TTAGTGCCACTGCAACGCAGGG-----AGGGGCTGTGATGTCC----CCGAGGTCCCACAATGTGAATTCAGATCACTTCTCCCTGAGTGCCTGACCATTCCTAGCCTGTGCTCCTGCCCCCATTGCTATTGAAACTTTGGGACCCCCATCTCCAACCCAGGTGCACCCCCTCTGCCTC---TCACTCACAGAGGTTTTCTCCCTGGACATCAGCAGCTGGGCTGGACCTGGGG-GAGGATACGGGAGTGTGAGGGGCAGTGAGGTGGCTGTTGGGATGGGTGGGAGTCT-GAGGTCTTCGGGCA-GAATTACCTCCTCTGTAGGCCCCCGTCCTTGGGCTCTGGCTCTGCAGCCCCTGGAGGACGTTGGAAA i ponAbe2.chr19 C 0 I 145 s rheMac3.chr19 60105851 963 + 64156825 ccctttccctggtttatgtttctta-cagcacattgcactcctggacac-atgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccaatccacagtgagcT-CCTGGGAACACTCACT---------------------CCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACCACCAGACGGCCAAACAGAGGAGGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCGCGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGGGGTCCACCGTGATGATGCTGAGAACCGGGTGAA-GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGTCTCACCCGACTGTCCAGCTCCACACTGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCGGGGCCAGAGCAAGGGGTTCATCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCTGGCCCCTGCCCAGCTCCCA-CTAGAGTGGCCGAGATCCAGGG-----AGCGACTGTGATGTCC----CCGAGGTCCCATAGTGTGGGTTCAGACCACCTTCCCCTTGGCCCCAGACCCTACCCAGCCTGTGCTCATGCCCCCATTGCTACAGAAACTTTGGAGCCCCCTTGCCCACTCCAGGTG----CCCCCCTCTTCTTGTCACTCACTGAGAATTTCCTCCTGGACATCAGCAACTGGGCTGGCCCTGGGG-GAGAACATGGGAGTGTGAGGGGCAGTGAGGGGCCTGTGCAGGCGGATGGAAGTCT-GGGGTCTTCAGGCA-GAATTACCTCCTCTGCAGGACCTGGTCCTTGGGCTCTGGCCCCGCAGCCCCTGCAGGACGGTAGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55133479 984 + 59248254 ccctttccctggtttatgtttctta-cagtacattgcactcctggacac-acgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGA-AGGGAGCCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACCACCAGACGGCCAAACAgaggaggaggagcaggaaggggacccgggaggaggCCCTCGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGGGGTCCACCGTGATGATGCTGAGAACCGGGGGAA-GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGTCTCACCCGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCGGGGCCAGAGCAAGGGGTTCATCTCCTGGGAAGGTTCCCCGAGACCTCTGAGTCCTGCTGGCCCCTGCCCGGCTCCCA-CTAGGGTGACCGAGATCCAGGG-----AGCGACTGTGATGTCC----CCGATGTCCCATAGTGTGGGTTCAGACCACCTTCCCCTTGGCCCCAGACCCTTCCCAGCCTGTGCTCATGCTCCCATTGCTACAGAAACTTTGGAGCCCCCTTGCCCACCCCAGGTG----CCCCCCTCTTCTCGTCACTCACTGAGAATTTCCTCCTGGACGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGAGGGGCAGTGAGGGGCCTGTGCGGGCGGATGGGAGTTT-GGGGTCGTCAGGCA-GAATTACCTCCTCTGCAGGACCTGGTCCTTGGGCTCTGGCCCCGCAGCCCCTGCAGGACGGTAGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47219162 984 + 51301725 CCCTTTCCCTGGTTTATGTTTCTTA-CAGCACGCTGCACTCCTGCACATGGTGCA-TGTAGTTGCATTTTGTCTCCCA-CCACGAGGTGAGCTCG-GGA-GGCGGGGGTGGCTTTGCTCCCTGCTGTGTCTGCAGCTCCCACAGGGAGCCTGATCCACAGTGAGCT-CCTGGGAACACtcgctggatgaatgaatga-agggagcCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGG-GCGCTCTAACCACCAGACCGCCAAACAGAGGAGGAGGAGCGGGAAGGGGACCCAGGAGGAGGCCCGCGAAGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGGGGTCCACTGTGACGATGCTGAGAACCGAGTGAA-GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGAACAGGGGCGGGGTCTCACCCGACTGTCCAGCTCCACCCTGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGCCAGAGCAAGGGGTTCGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCTGGCCCCTGCCCAGCTCCCA-CTAGAGTAGCCGAGATCCAGGG-----AGCGACTGTGATGTCC----CCGAGGTCCCATAGTGTGGGTTCAGACCACCTTCCCCTTGGCCCCAGACCCTTCCCAGCCTGTGCTCATGCCCCCATTGCTACAGAAACTTTGGAGCCCCCTTGCCCACCCCAGGTG----CCCCCCTTTTCTTGTCACTCACTGAGAATTTCCTCCTGGGCGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGAGGGGCAGTGAGGGGCCTGTGCGGGCGGATGGGAGTCT-GGGGTCTTCAGGCA-GAATTACCTCCTCCGCAGGACCTGGTCCTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGGTAGAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46935142 984 + 50890351 ccctttccctggtttatgtttctta-cagcacgttgcactcctgctcatggtgca-tttagttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagct-cctgggaacactagctggatgaatgaatga-aGGGAGCCCAGGGGAGCA-GGGTGGTTCATCTATTCCT-CATCCTCctgaggcctgggga-gcactctaaccaccagacggccaaacagaggaggaggagcgggaaggggacccgggaggaggcccgcgaggtcccaggacagcaggagagagtgaggtcacagcaggcgggaggcagcgtgctggacaaagaggggtcaaccgcaacgatgctgagaactgggggaa-gaggacagagaagtcc-tgctggattagatctggcaccaggaggcctttggtgcctgggacaggggcggGGTCTCACCCGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGCCAGAGCAAGGGGTTTGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCTGGCCCCTGCCCAGCTCCCA-CTAGAGTGGCCGAGATCCAGAG-----AGCGACTGTGATGTCC----CCGAGGTCCCATAGTGTGGGTTCAGACCACCTTCCCCTTGGCCCCAGACCCTTCCCAGCCTGTGCTCATGCCCCCATTGCTACAGAAACTTTGGAGCCCCCTTGCCCACCCCAGGTG----CCCCCCTTTTCTTGTCACTCACTGAGAATTTCCTCCTGGGCGTCAGCAACTGGGCTGGCCCTGGGG-GAGGACACGGGAGTGTGAGGGGCAGTGAGGGGCCTGTGCGGGCGGATGGGAGTCT-GGGGTCTTTAGGCA-GAATTACCTCCTCTGCAGGACCTGGTCTTTGGGCTCTGGCTCCGCAGCCCCTGCAGGACGGTAGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540554 955 + 49145316 ccctttccctggttcattttcctta-cagcacgtcgcactcctggacac--tgtg-tttatttgcattttgtctccca-ccacgaggtgagctca-ggagggcaggggcggctttgctccctgctgtgtctgcagctcccacggggagccccatccacagggagct-cctgggaacactcgctgggtgaatgaatGAAGGGAAGCCCAGGGCACCA-GTGTGGTTC----ATTCCT-CATCCTCCTGAGGCCTGGGGA-TCCCTCTAACAACCAGACGGCCAAACAGAGGACGAGGAGCAGGAAGGGGACCCAGGAGTAGGCCCACGATGTCCCAGGACACCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACATGGAGGGTCCACCCTGGATGGTGCTGAGAGCCAGGGAAG-GAGGACAGAGAAGTCC-TGCTGGATTAGATCCGGCACCAGGAGGCCTTTGGTGCCCAGGACAGGGGCGGGGTCTCACCTGAGTGTCCAGCTCCACCTCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGG-CAGAGCAAGGGGATTGTCTCCTGGGAAGTTTCCCTGGGATGTCTCAGCCCCGccagcccctgcccagctcccagatggggcagctgagatccaggg-----aggggttgtgatgtcc----c-aaggtcccaca---------------------CCCTGAGCCCCAGACCCCTTCCAGCCTCTGCCCTT-TCCTCATTGCGATGGAAACTGTGG-GTCCCCATCTCCCTCCTGGCTGGG--GTCACCTCTTCCTGTCACTCACAGAGAGTTTCTTCTTGGGTGTCGGCAGCTGGGCTGGATCTGGGG-GAGGACACAGGAGCTGTAGGAGCAGTGTGTGGGCTG---GGGTGAGTGGGAGTCT-GGGGTCTTCAGGCA-GAATTACCTCCTCTGCAGGCCTCCGCCTGTGGGTTCTGGCTTCACAGCCCCTGCAGGATGTTGGAAA i calJac3.chr22 C 0 I 12 s canFam3.chr1 19701768 903 - 122678785 cccATATCTTGTTTTATATTTCTTAGCCTCACTTTGTGCTTGAGGATGC--TGCAGCTTCTTTGCATATTGTCTGACACCCACAAGGAGAGCTCACTGA-GTATGGTTCAGTTTTGCTTACTGTTGAGCTTGCAAC-ACTAGGTGGGGCCTGGT-AATATTAGACTGCTCGTGCTCCTCTGCTGAGTGAATGAATGA-AGGAGGCCTAGAGACTTGTGGGTGATTCACTTCTTCATGCACCCTGTTGAGATCTGGGTATGCATCCCAACAACAAGA-AGTCAGACAGTGGATGGGTAGCCAGACATGG----GGAGGAGGGCCCAGGAGGTC-----ACAGCGGGATGACCCAGGTGCCCAAGAAGGGAGAAGGTACACGTGGGACAGA--------------------GCTGAGACAGGGTGGTGTGAGGACAGAGAAGCATGTGTCAGATTAAGTTTGGCACCAAGAGGACCCTATGGTCCAGATGGGAGTGGGGGTCTCACCCGATGGTCCAGCTCGACCCCTTCCTCAGGCCATGTGTCTTGCACAGCAGCATCTGTGGAG-TAGAACGGGGTGTGTGTCTT---GGCGGGTTCCCTGAGCTCTCTCAGGGGTGC-AGACCCTGACCTGCTCCCAGATGAGGAGGCTGTGACCCAGGGGATCCAGGG---GTGAGGTTAGGTGCTAAGATCATGCA-TGTGGGAATTGAGTCCTTACCCCTTA-CCCCAAACC--TTCCAGCCCA--------CCCCCA------------------------------------AGGCA----GCCCCTTCCTC-------TCACAGAGGGTTTCCTCCTGGGTGGTAGCAGCTGGGCTGGAGCTGGGGAGGAGACATG---GTGTCAGAGGGCATGCAGGGGGTG----GGTGGGTGGGAGTCTGGGGGTCTGTGGGCAGGAGTTACCTGTCCTGCAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCAGGACATTAGGAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=194004.000000 s hg38.chr19_GL949753v2_alt 227548 130 + 796479 TGGGCTGGACAGAGATGGACAGAGG--GTCAGGCCTGGGAGAATTCGAACCAGCTGCCCTGCACACACAACTCGAGCGGAAAGAAGGAAACCTGGAGGCCCACTGGCACTGAGGCTTTAAATACGTCGTAAG s panTro4.chr19 59167399 130 + 63644993 TGGGCTGGACAGAGATGGACAGAGT--GTCAGGCTTGGGAGAATTCGAACCAGCTGCCCTGCACACACAACTCGAGCAGAAAGAAGGAAACCCGGAGGCCCACCGGCACTGAAGCTTTAAATACGTCGTAAG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60106814 130 + 64156825 TGGGCTGGACAGAGATGGACAGAGT--GTCAGGCTTGGGAGAATTCGAACCAGCTGCCCTGCACACACAACTTGAGCAGAAAGAAAGAAACCTGGAGGCCCACTGGCCCTGAGGTTTTAAATACATCATAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134463 130 + 59248254 TGGGCTGGGCAGAGATGGACAGAGT--GTCAGGCTTGGGAGAATTCGAACCAGCTGCCCTGCACACACAACTTGAGCAGAAAGAAAGAAACCTGGAGGCCCACTGGCCCTGAGGTTTTAAATACATCATAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220146 130 + 51301725 TGGGCTGGGCAGAGATGGACAGAGT--GTCAGGCTTGGGAGAATTCGAACCAGCTGCCCTGCACACACAACttgagcagaaagaaagaaacctggaGGCCCACTGGCCCTGAGGTTTTAAATACAtcataaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936126 130 + 50890351 TGGGCTGGACAGAAATGGACAGAGT--GTCAGGCTTGGGAGAATTCGAACCAGCTGCCCTGTACACACAACTTGAGCAGAAAGAAAGAAACCTGGAGGCCCACTGGCCCTGAGGTTTTAAATACATCATAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541521 130 + 49145316 TGGGCTGTGTGAAGAAGGACAGAGT--CTCAGCCTTGGGAACATTGGAACCATCTGCCCTGCAAACGCAGCTCGAAGGTAAGGAAGGAAACCTGGACACACTCTTGCTTCCATGCTCCAAACGTCTCAAAAG i calJac3.chr22 I 12 I 53 s canFam3.chr1 19702671 104 - 122678785 ------------------TCAGCATCCCTCTGGAATGGGAG-GTTACAACCTCCTG-CCTCCATGTGATACCAGGG------AAAGGAGCCCTTCACCCGCATTGCCTGTGTGTTTCTCCATCTCCCAAG-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4212649 145 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=9555.000000 s hg38.chr19_GL949753v2_alt 227678 8 + 796479 TTTAAAGT s panTro4.chr19 59167529 8 + 63644993 TTTAAAGT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60106944 8 + 64156825 TTTAAAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134593 8 + 59248254 TTTAAAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220276 8 + 51301725 tttaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936256 8 + 50890351 TTTAAAGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19702775 6 - 122678785 ATTGAA-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4212649 145 - 60714840 I e calJac3.chr22 45541651 53 + 49145316 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=67572.000000 s hg38.chr19_GL949753v2_alt 227686 47 + 796479 AAAATCAGAAGAATCAAGCACTTCC-----ACACAT----GCTCACATTTATTCTC s panTro4.chr19 59167537 47 + 63644993 AAAATCAGAAGAATCAAGCACTTCC-----ACGCAT----GCTCACATTTATTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4212794 46 - 60714840 AAAACCGAAAGAATAAAACACTTCC-----AT-TAT----GCCCTCATTTATTTTC i ponAbe2.chr19 I 145 C 0 s rheMac3.chr19 60106952 47 + 64156825 ACAATCAGAAGAATCAAGCACTGCC-----ACGCAT----GCTCACATTTATTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134601 47 + 59248254 AAAATCAGGAGAATCAAGCACTGCC-----ACGCAT----GCTCACATTTATTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220284 47 + 51301725 aaaatcagGAAAATCAAGCACTGCC-----ACGCAT----GCTcacatttattctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936264 47 + 50890351 AAAATCAGAAGAATCAAGCACCGCC-----ACGCAT----GCTCACATTTATTCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19702781 47 - 122678785 --------AAGAGGGGAGCACCTTCTATTGGCACATGGGAGCCAACCTGGGTGTT- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e calJac3.chr22 45541651 53 + 49145316 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=1068633.000000 s hg38.chr19_GL949753v2_alt 227733 454 + 796479 TTCTTTCTCGATCGATTTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGACTTTCCTCTGT-GTTTGGTTTCCCTCTGGCTGGTGCCCCGAGCCCACCCTCGGTCGGCCCAC-----------------GGGTTCCCCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggaggaggaa------gaggaggaggaacagcagcaggacgaAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACGTTGGGAATGGGG--ATGACGTcattgatgtgagcaccttctgtgtg-ca-------ggcgcgagctaggtctttccttcatgagctccaaccctcacagcagttgtgcaacatgggattg------ccaaccc-------cccaa-ttcacagaggagcaaactgaggctcagagaggggaatcgcctgccccaggctcctcagc s panTro4.chr19 59167584 454 + 63644993 TTCTTTCTCGGTCGATTTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGACTTTCCTGTGT-GTTTGGGTTCCCTCTGGCTGGTGCCCCGAGCCCACCCTGGGTCGGCCCAC-----------------GGGTTCCCCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggaggaggaa------gaggaggaggaACAGCAGCAGGACGAAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACGTTGGGAATGGGG--ATGACatcattgatgtgagcaccttctgtgtg-ca-------ggcgcgagctaggtctttcctttatgagctccaaccctcacagcagtcatgcaacatgggattg------ccaaccc-------cccaa-ttcacagaggagcaaactgaggctcagagaggggaatcgcctgccccaggctccctagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4212840 461 - 60714840 TTCTTTCTAGAT---TTTCTCA-CTGGGAATTTCTGGAGCAGAGTTTCTAAGCTGACCTCTCC---T-ATCTGGAGTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCCATCAGCCCAC-----------------GGGTCCCCCAATTTCCTACTTACCCGATGTCCTGTGTTTGCCCTGATGCCAGTGTTggagaaggaggaa------gaggaggagggagagaagcaggaTGGAGACCACCAAGACCCCGATCAGTACCTCCCAGTGCCTTCTCAGACCTTGGGCATGA-TGATGTCAGGAATGGGG--ATGATGTCACTGATGTGCaaacctactgtgta-tgcacctactgtgtgtgctgggtctttctttcattacctccaaccctcacagcagttgtgcaacctgagattg------ccaccctctctccactcat-ttcacaaaagaggaaactgaggctcagagagggaaatcgcctgccccagaccccccagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60106999 450 + 64156825 TTCTTTCTCGA----TGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGT-GTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCAC-----------------GGGTCTCCTCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCagaggaggaggaa------gaggaggaggaagagcagcaggaTGAAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACGTCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg-ca-------ggtgcgagctaggtctttccttcatgagctccaaccctcacagcagtcgtgcaacatgggattg------ccaaccc-------cccaa-ttcacagaggagcaaaccgaggctcagagaggggaatcgcctgccccaggccccccagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55134648 450 + 59248254 TTCTTTCTCGA----TGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGT-GTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCAC-----------------GGGTCACCCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggaggaggaa------gaggaggaggaagagcagcaggatgaAGGCCACTGAGACCCCAGTCACAACCCCCAGGTGCCTTCCCAGACCTTGTGCGTGA-TGACGTCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg-ca-------ggcgcgagctaggtctttccttcatgaactccaaccctcacagcagtcgtgcaacatgggattg------ccaaccc-------cccaa-ttcacagaggagcaaaccgaggctcagagaggggaatcgcctgccccaggccccccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220331 451 + 51301725 ttctttctcgA----TGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGT-GTTTGGGTTCCCTTTAGCTGGTGCCCTGAGCCCACCCTCGGTCAGCCCAC-----------------GGGTCACCCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGtcggaggaggaagaa------gaggaggaggaagagcagcagGATGAAGGCCACTGAGACCCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACGTCAGGAATGGGT--ATGACGTCATTGAtgtgagcacctactgtgtg-ca-------ggcgCGAGCTAGGTCTTTCCTTCATGAGCTCCAACCCTCACAGCAGTCGTGCAACATGGGATTG------CCAACCC-------CCCAATTTCACAGaggagcaaactgaggctcagagaggagaatCGCCTGCCCCAGGCCCCCCAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936311 450 + 50890351 TTCTTTCTCGA----TGTTTCACCTGGGAATTTCTGGAGCAGTTTTTCTAAGCTGAGTTTCCTGTGT-GTTTGGGTTCCCTTTGGCTGGTGCCCTGAGCCCACCCTCAGTCAGCCCAC-----------------GGGTCACCCCATTCCCTACTCACCCGATGTCCTGTGTTTGCTCTGATGCCGATGTCggaggagaaggaa------gaggaggaggaagagcagcaggatgaAGGCCACTGAGACCCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCGTGA-TGACATCAGGAATGGGT--ATGACGTcattgatgtgagcacctactgtgtg-ca-------ggcgcgagctaggtctttccttcatgagctccaaccctcacagcagtcgtgcaacatgggattg------ccaaccc-------cccaa-ttcacagaggagcaaactgaggctcagagaggggaatcgcctgccccaggccccccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541704 461 + 49145316 TGCTTTCTCCA----TTTGCCTGGTGAGAAGTGCTAGAACAGTTTCTCAAAGCTGCGTTTTCCCAGCAGTTTGGATTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGGTTGGCCCAC-----------------GGGGTCCCCCCTTCTATACTCACCTGATGTCCAGTGTTTGCCCTGACGCTGATGTCggaggacgaggaagaggaggaggaggaggaagagcagcaggaTGAAGGTCACTGAGACCCCGGTCACAACCCCCAGGTTCCTTCCCAGACCTTGAGCATGA-GGACGTCAGGAATGGGG---TGGTGTtactgat-tgagcgcctactgtgtg-ca-------ggtgactgctcggcctcttattcaccaccttcaacccccactacagtcgagcagcgcggaattgacacatccacccc------acccac-tttacagacaaa-aaactgaggctcagagaggggagtcgcctgccccaggccccccagc i calJac3.chr22 I 53 C 0 s canFam3.chr1 19702828 473 - 122678785 TTCTGTCTAGAC---TCTCTGACTTGAGA--TTCTGTGGAAGTGTCCTACATCGGCCTTTCCCACCT-CTCTGGGTTCCCTCTGGCTGCTGCCCTGAGCCCACCCTGGGTCAGCCCACAGAGCACCACCACCCCTGGGGTGCCTCAGCCCCTTCTTACTTGACTTCCTGCATTTGCCCCGACGTTGCTGTCGGACCAGGAAGAG------GATGAGGAGGCAGAGCATCAGGATGAAGGCCACCGAGGACCCGATGAGGACGTACAGGTACCAGCTAGGACCTTGGGCAGGAGCTATACCATGAATGAGCCAGTGATTCCATtttactgagcacctactgtgtgcca-------ggcacctgctgggctctgtgcttgc-acctgtgactctgacaatgatcatgcagcaggggattg------ctgtccc--tcccacctgc-tccacagact-gtaaactgaggcacagaggggtcaatcacgtgtcccaggtcgtccagt i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=12117.000000 s hg38.chr19_GL949753v2_alt 228187 6 + 796479 ctggaa s panTro4.chr19 59168038 6 + 63644993 ctggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4213301 6 - 60714840 caggaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60107449 6 + 64156825 ctggaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135098 6 + 59248254 ctggaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220782 6 + 51301725 CTGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936761 6 + 50890351 ctggaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19703301 6 - 122678785 gtggag i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e calJac3.chr22 45542165 0 + 49145316 C e nomLeu3.chr10 102820226 18970 - 106955855 T a score=595830.000000 s hg38.chr19_GL949753v2_alt 228193 477 + 796479 gaagcaggtctgggaagggaaccagggactttgtgttttccccagctgtcctcctgctgccccaccaGGTGCACACCTGTTTCCT---------------ATTTGACAGGAGGGGCCTGTCCTAGTGTCTCCATCTGGGGCTG-GTGTCCTTCTTAGGATCCTCCCTTCCCCAGCACAGCAGGGCCTGGGAGAGGGAGTGGGTTGTGCAGGACGGACCCTGCATTGCTCTCACTCCCAGCTCAGCCAGGTCCGTTTCCCACTCTGCCAAGTTCCCATACTCCCATGCAGAACCTGTCTGGATAGGGGCTCTGTGTGTATCTGGGAAGGGCTGAGGGTAGCAGGAGGACGGTGCCCCTGCCGAGCTGTGTACAGGGCCAGGTCCcatgattttgcttacgcctcgcagcagttctgtgagctggatgggactgagccagtttacagctgctgaaactgagtcagagtagaaagttgacctgcctggg--cccacgg s panTro4.chr19 59168044 477 + 63644993 gaagcaggtctgggaagggaaccagggactttgtgttttccccagctgtcctcctgctgccccaccaGGTGGACACCTGTTTCCT---------------ATTTGACAGGAGGGGCCTGTCCTAGTGTCTCCATCTGGGGCTG-GTGTCCTCCTTACGATCTTCCCTTCCCCAGCACAGCAGGGCCTGGGAGAGGGAGTGGGTTGTGCAGGACGGACCCTGCATTGCTCTCACCCCCAGCTCAGCCAGGTCCGTTTCCCACTCTGCCAAGTTCCCATACTCCCATGCAGAACCTGTCTGGATAGGGGCTCTGTGTGTATCTGGGAAGGGCTGAGGGTAGCAGGAGGACGGTGCCCCTGCCGAGCTGTGTACAGGGCCAGGTCCcatgattttgcttacacctcgcagcagttctgtgagctggatgggactgagccagtttacagctgctgaaactgagtcagagtagaaagttgacctgcctggg--cccacgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60107455 494 + 64156825 gaagcaggtctgggaagggaacccaggaccttgagttttccccagctgttctcctgctgccctaccaGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCGTCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTG-GTGTCCTCCTTACGACCCTCCCTTCCCCAGCACAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTGTCACCCCCAGCTCAGCCAGGTCCGCTTCCCACTCTGCCGAGTTCCCACACTCCCATGCAGCACCTGTCTGGATAGAGGCTCTGTGTGTATCTGGGAAGGGCCGAGGGTAGCAGGAGGGCTGTGTCCCTGCTGAACTGTGTACAGGGCCAGATCCCGAGatttcacttacacctcacagcggttctatgagctggatgggactgagtccgtttacaactgctgaacctgacttggagtagaaaattgacctgcctggggccccacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135104 494 + 59248254 gaagcaggtctgggaagggaacccaggaccttgtgttttccccagctgttctcctgctgccctaccaGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCGTCTGATAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTG-GTGTCCTCCTTACGACCCTCCCTTCCCCAGCACAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTGTCACCCCCAGCTCAGCCAGGTCCGCTTCCCACTCTGCCGAGTTCCCACACTCCCATGCAGCACCTGTCTGGATAGAGGCTCTGTGTGTATCTGGGAAGGGCCGAGGGTAGCAGGAGGGCTGTGTCCCTGCTGAACTGTGTGCAGGGCCAGATCCCGAGatttcacttacacctcacagcggttctatgagctggatgggactgagtccgtttacaactgctgaacctgacttggagtagaaaattgacctgcctggggccccacgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47220788 494 + 51301725 GAAGCAGGTCTGGGAAGGGAACCTGGGACCTTGTGTTTTCCCCAGTTGTTCTTCTGCTGCCCTACCAGGTGGACACCCGCTTCCTGCTCTGGGTCTCTTCATCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGGCTG-GTGTCCTCCTTAccaccctcccttccccagcaCAGCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTGCATTGCTCTCACCCCCAGCTCAGCCAGGTCCGCTTCCCGCTCTGCCGAGTTCCCACACTCCCATGCAGCACCTGTCTGGATAGAGGCTCTGTGTGTATCTGGGAAGGGCCGAGGGTAGCAGGAGGGCTGTGTCCCTGCTGAACTGTGTACAGGGCCAGATCCCGAGATTTCACTTACGCCTCATAGCGGTTGTACGAGCTGGATGGGACTGAGTCCGTTTACAACTGCTGAACCTGACTTGGAGTAGAAAATTGACCTGCCTGGGGCCCCACGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46936767 494 + 50890351 gaagcaggtctgggaagggaacccgggaccttgtgttttccccagttgttctcctgctgccctaccaGGTGGACACCCGCTTCTTGCTCTGGGTCTCTTCATCTGACAGGAGAGGCCTGTGCTAGTGTCTCCATCTGGGACTG-GTGTCCTCCTTACCACCCTCCCTTCCCCAGCACACCAGGACCTGGGGGAAGGAGTGGGCTGTGCAGGACGGACCCTACATTGCTCTCACCCCCAGCTCAGCCAGGTCTGCTTCCCACTCTGCCGAGTTCCCACACTCCCATGCAGAACCTGTCTGGATAGAGGCTCTGTGTGTATCTGGGAAGGGCTGAGGGTAGCAGGAGGGCTGTGTCCCTGCTGAACTGTGTACAGGGCCAGATCCCGAGatttcacttacgcctcgtagcggttctatgagctggatgggactgagtccgtttacaactgctgaacctgacttggagtagaaaattgacctgcctggggccccatgg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19703307 272 - 122678785 gtggcagggctgggacaggaagttggga---tgaaggttccctg--tgctctACTCATGCCTCCCCTGTGAGGTCACCACTCCGAGGCTCTGGGCTCCTCATTTG--GGGCAGGATCTGTCCCAGCATCTTCATCCTGAGCTGAGGGTCCTTC-----------------------------------------------------------CAGACCTCAA--------CACCCCCAGCC-------ATCAACTTCCCTCTC-------CTCCCCTCCTCCTACA-----------------------------ATAT----------------------------CACTGTCATTGC-------TGCAGAGGGACAG-----------------ACACCTTCC--------------CTAGA---------------------------ATCATGATTTGGG---------TAACTTCCCCATGAGCCC---- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4213307 0 - 60714840 C e calJac3.chr22 45542165 0 + 49145316 C e nomLeu3.chr10 102820226 18970 - 106955855 T a score=8733.000000 s hg38.chr19_GL949753v2_alt 228670 6 + 796479 tgggat s panTro4.chr19 59168521 6 + 63644993 tgggat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60107949 6 + 64156825 tgggat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135598 6 + 59248254 tgggat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221282 6 + 51301725 TGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937261 6 + 50890351 tgggat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542165 6 + 49145316 taggca i calJac3.chr22 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e canFam3.chr1 19703579 0 - 122678785 C e ponAbe2.chr19 4213307 0 - 60714840 C e nomLeu3.chr10 102820226 18970 - 106955855 T a score=321173.000000 s hg38.chr19_GL949753v2_alt 228676 166 + 796479 gcggcagagctgggaagtgaacccaggagtctgacccg---------------------cagcccttgttctctgcacCTGAGCGGAGCCCCGGAGCTGCAGGGAAAGAGCCTGAATGCCCCAAACCACGGCCCTGCTCCCCTCCCCTGCCCCAGGTCACT------GTCACTGCTGCCGGTGGGACAGGACA s panTro4.chr19 59168527 166 + 63644993 gcggcagagctggggagtgaacccaggagtctgacccg---------------------cagccctcgttctctgcacCTGAGCGGAGCCCCAGAGCTGCAGGGAAAGAGCCTGAATGCCCCAAACCACGGCCCTGCTCCCCTCCCCTGCCCCAGGTCACC------ATCACTGCTGCCGGTGGGACAGGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4213307 166 - 60714840 gcggcagagctgggaagggaacccaggagtctgacctg---------------------cagcccttgttccctgcaACAGAGCCGAGCCCCAGAGTTGCAGGGAAAGAGCCTGACTGTGTTGAACCACGGCCCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCTCTGCTGCAGGTGGGACAGGACA i ponAbe2.chr19 C 0 I 94 s rheMac3.chr19 60107955 166 + 64156825 gcagccgagctgggaagggaacccgggagtctgacctg---------------------cagcccttgttcccagcaccaGAGCCGAGCCCTGGAGATGCAGGGAAAGAGCCTGAATGCCCCAAACCATGGCCCTGCTCCCCTCCTCCACTCCAGGTCTCC------ATCACTGCTGCAGGTGGGACAggaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135604 166 + 59248254 gcagccgagccgggaagggaacccaggagtctgacctg---------------------cagcccttgttcccagcaccaGAGCCGAGCCCCGGAGATGCCGGGAAAGAGCCTGAATGCCCCAAACCATGGCCCTGCTCCCCTCCTCCACTCCAGGTCTCC------GTCACTGCTGCAGGTGGGACAggaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221288 166 + 51301725 GCAGCCGAGCTGGGAAGTGAACCCGGGAGTCTGACCTG---------------------CAGCCCTTGTTCCCAGCACCAGAGCCGAGCCCCAGAGATGCAGGGAAAGTGCCTGAATGCCCCAAACCATGGCCCTGCTCCCCTCCTCCGCCCCAGGTCACC------GTCACTGCTGCAGGTGGGACAGGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937267 166 + 50890351 gcagccgagctgggaagtgaacccgggagtctgacctg---------------------cagcccttgttcccagcaccaGAGCCGAGCCCTGGAGCTGCAGGGAAAGAGCCTGAATGCCTCAAACCATGGCCCTGCTCCCCTCCTCCACTCCAGGTCTCC------GTCACTGCTGCAGGTGGGACAGGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542171 192 + 49145316 gcagcagagctgggaagggaacctgggAGTTTGATCTGCTGAGAGCCAGGGAAGGAGGACAGCCCTTGTTCCCTGCACCTGAGCTGAGCCCTGGAGCTGCAGGGAAAGAGCGTGACC-TACTGAACCAAAGCCCTGCTCCCCTCCTCTGCCCCAGGTCACCGTCACTGTCACTGCTGCAGTTGGGACAGGACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703579 42 - 122678785 --------------------------------------------------------------------TCCTCT--------------CCCaggaggt-------cagagcc---atggtcagaaccaaggaca----------------------------------------------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=20070.000000 s hg38.chr19_GL949753v2_alt 228842 24 + 796479 GTCCCCTGAAGAATCCcatcaa---------------------------------------------------------------------------tg s panTro4.chr19 59168693 24 + 63644993 GTCCCCTGAAGAATCCcatcag---------------------------------------------------------------------------tg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60108121 24 + 64156825 ggcccctgaagaatcccacctg---------------------------------------------------------------------------tg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135770 24 + 59248254 ggcccctgaagaatcccacctg---------------------------------------------------------------------------tg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221454 24 + 51301725 GGCCCCTGAAGAATCCCACCTG---------------------------------------------------------------------------TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937433 24 + 50890351 GGCCCCTGAAGAATCCCACCTG---------------------------------------------------------------------------TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542363 99 + 49145316 GGCTCCTGAGGAATCAGGCCTGGGAGGCTTCCCTAGGTGGCCTCCTCTCTCAGGAGGTCACAGCTGGGAgtcagagctaaaaggaactttcccaccctg i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703621 13 - 122678785 -----------aatctaatctg---------------------------------------------------------------------------gg i canFam3.chr1 C 0 C 0 e mm10.chr7 3714339 20668 + 145441459 I e ponAbe2.chr19 4213473 94 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=12124.000000 s hg38.chr19_GL949753v2_alt 228866 4 + 796479 -cagg s panTro4.chr19 59168717 4 + 63644993 -cagg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60108145 4 + 64156825 -cagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135794 4 + 59248254 -cagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221478 4 + 51301725 -CAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937457 4 + 50890351 -CAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542462 4 + 49145316 -cagg i calJac3.chr22 C 0 C 0 s mm10.chr7 3735007 4 + 145441459 -CAGG i mm10.chr7 I 20668 C 0 s canFam3.chr1 19703634 5 - 122678785 ccatg i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4213473 94 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=436894.000000 s hg38.chr19_GL949753v2_alt 228870 198 + 796479 cctctctcctttacacttggagaaactgaggcccaggcaggggaagggcttgtgcaCTTCACCATCTCCAGAGG-AGCCTGAACCTACGACAGAACCCACCCCTGCCTCCCCTGGTCTCCGCCCACCTCCCACT--CAGAGCCCCTCACTCACCACTCTGGGGATCCAACCCCGTGGGGGTGAGGGG-CTGGTCCTCAGGGC s panTro4.chr19 59168721 197 + 63644993 cctctctcctttacactcggagaaactgaggcccaggcaggggaagggcttgtgcaCTTCACCATCTCCAGAGG-AGCCTGAACCTACGACAGAACCCACCCCTGCCTCCCCTGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCTGGGGATCCAACCCCGTGGGGGTGAGGGG-CTGGTCCTCAGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4213567 198 - 60714840 cctctctcctttatacttgcagaaactgagtcccaggcaggggagggacctgtccacatcaccacctccagagg-agcctgaacctaggatagaacccacccttggctcccctagaccctgcccacctcccact--cagAGCCTCTTACTCACCACTGTGGGGGCCTGACCCTGTAGGCATGAGGGG-CTGGTCCTCAGGGC i ponAbe2.chr19 I 94 C 0 s rheMac3.chr19 60108149 198 + 64156825 cctctctcctttacacttggagaaactgaggcccaggcaggggaagggcttgtgcacgtcaccatctccggagg-agcctgaacctaggacagaacccagccctggctccTCCAGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCACCACTCTGGGGGTCTGACCCCGTGGGGGTGAGGGG-CTGGTCCTCAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135798 198 + 59248254 cctctctcctttacacttggagaaactgaggcccaggcaggggaagggcttgtgcacgtcaccatctccggagg-agcctgaacctaggacagaacccagccctggctcctccggaccccgtccacctcccact--cagagcccctcactcaccactctgGGGGTCTGACCCTGTGGGGGTGAGGGG-CTGGTCCTCAGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221482 197 + 51301725 CCTCTCTCCTTTACacctggagaaactgaggcccaggcaggggaAGGGCTTGTGCACATCACCATCTCCAGAGG-AGCCTGAACCTAGGACAGaacccacccctgcctccccaggaccccgtccacctcccact--cagagcccc-cactcaccactcTGGGGGTCCGACCCCGTGGGGGTGAGGGG-CTGGTCCTCAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937461 197 + 50890351 CCtctctcctttacacttggagaaactgaggcccaggcaggggaagggcttctgcacatcaccatctccagagg-agcctgaacctaggacagaacccacccctgcctccccaggaccccgtccaCCTCCCACT--CAGAGCCCC-CACTCACCACTCTGGGGGTCCGACCCCGTGGGGTTGAGGGG-CTGGTCCTCAGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542466 158 + 49145316 cctctctcctttacacttggagaaactgaggcctaggcaggggaggggcct-----------------------------------------GAACTGAGCCCTGCCTCCCCTGGACCCCACCCACCTCCCGCT--CAGAGACCCCGACTAACCACTGTGGGGATCTGGCTCCATGGGAGTGAAAAG-CTGGTCCTCAGGGA i calJac3.chr22 C 0 T 56022 s mm10.chr7 3735011 184 + 145441459 CTTCTCCCATTCATACTCAGAGAAGGAGCAGCCCA-GCAATGGAAGGGACTGTCCAAGT-AGGACCTCCAGCTGCAGCTTTATC--AGGATATAAGC-AGCTTTACCCATCTGAG------CCTACATTCCAA---CAGAGTCTT-TGTTAGTAATCCCGGGA--CAGATTCTGTGCAGGGGAAATGTTTGTTTCTTAGGG- i mm10.chr7 C 0 C 0 s canFam3.chr1 19703639 159 - 122678785 actctctcttttacacttggggaaactgaggcccacacatgggaggggcatgtccaagacagggaatgtagagg-gtcatgaagtgagggtgtaaatcagccctgatccccaTGA--CCCACCCACCACCTCCTGACAGAGACCCTCACTTACC-CTCAGAGA--------------------------------------- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102820226 18970 - 106955855 T a score=141684.000000 s hg38.chr19_GL949753v2_alt 229068 62 + 796479 CTGCT-GGGTCAGGACGGGG--AGGTGAGGGCTGGGGCTGCCCTGCTCCCCACATCAGCCCGGCT s panTro4.chr19 59168918 62 + 63644993 CTGCT-GGGTCAGGACGGGG--AGGTGAGGGCTGGGGCTGCCCTGCTCCCCACATCAGCCCGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4213765 62 - 60714840 CTGCT-GGGTTAGAACAGGG--ATGTGAGAGCTGGGGCTGCCCTGCTCCCCACATCAGCTCGGCT i ponAbe2.chr19 C 0 I 886 s rheMac3.chr19 60108347 62 + 64156825 CTGCT-GGGTCAGGATGAGG--AGGTGAGGGCTGGGGTGGCCCTGCCCCCCACGTCAGCCCGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55135996 62 + 59248254 CTGCT-GGGTCAGGATGAGG--AGGTGAGGGCTGGGGTGGCCCTGCCCCCCACGTCAGCCCGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221679 62 + 51301725 CTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCGGCCCTGTTCCCCACGTCAGCCCGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937658 62 + 50890351 CTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCGGCCCTGCCCCCCACGTCAGCCCGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45486602 62 + 49145316 CTGCT-GGGTCACGATGGGG--AGCTGAGGGCTGGGGCTGTCCTGCTCCCCACGTCACCCCAGCT i calJac3.chr22 T 56022 C 0 s mm10.chr7 3735195 52 + 145441459 ---------ATATTATGGGG--AGGTGACTTTCTAGGTT-CTTTGCTCACAATCTTA-CCCAGCT i mm10.chr7 C 0 I 1 s canFam3.chr1 19703798 56 - 122678785 CTCCTGGGGTCAGTAGAGGGTCAGGGGAGGGCCTGTGTG-------CTTCCACTGCA--CCTGCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102820226 18970 - 106955855 T a score=157196.000000 s hg38.chr19_GL949753v2_alt 229130 99 + 796479 GCTCCTCCCCCAGGCTGGGCCCCAACACCCAACATCTCTCTCTGCCTCGA-CGCCCGCC--CCCTCACCGGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGC s panTro4.chr19 59168980 99 + 63644993 GCTCCTCCCCCAGGCTGGGCCCCAACACCCAACATCTCTCCCTGCCTCGA-CGCCCGCC--CCCTCACCGGCCCAGCCTCAGAGCCCCGGGGAGCCTGCGGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60108409 93 + 64156825 GCTCCTCCCCCAGGCTGGGCCCCAACAC-------CTCCCTCTGCCTCGCGCCCCCCGC--CCCTCACCGGCCCAGCCTCGGAGCCCCTGGGAGCCTGTGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55136058 93 + 59248254 GCTCCTCCCCCAGGCTGGGCCCCAACAC-------CTCCCTCTGCCTCGCGCCCCCCGC--CCCTCACCGGCCCAGCCTCGGAGCCCCTGGGAGCCTGTGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221741 91 + 51301725 GCTCCTCCCCCAGGCTGGGCCCCAACAC-------CTCCCTCTGCCT--CGACCCCCGC--CCCTCACCGGCCCAGCCTCAGAGCCCCTGGGAGCCTGTGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937720 90 + 50890351 GCTCCTCCCCCAGGCTGGGCCCCAACAC-------CTCCCTCTGCCTCGC-CCCCCTGC--CCCTCACCGGCCCAGCCT--GAGCCCCTGGCAGCCTGTGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45486664 89 + 49145316 ---CCTCCCCCAGGCTGGGCCCCAACAT-------CTCCCTCTGCCCCGA-CACTCCAC--CCCTCATCAGCCCAGCCTCAGAGCCCCTGGGAGCCTGTGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3735248 81 + 145441459 TCTCATCATCCAAGTGGAGGCTCAATGC-------CTCTCTTTGGATGCT--------A--CCTTCTGTAGCCGAACAGTTAAGCCCC----AGCCTCTGGT i mm10.chr7 I 1 C 0 s canFam3.chr1 19703854 86 - 122678785 GCCCCTCCCCCAGA-TGGGTCCCCACCC-------CTCCCTATCCCATGAACACCCAGCCTCCTCCACCAGCCGAG-------ACCCCTGGTGCCCATCGG- i canFam3.chr1 C 0 I 15761 e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=2599264.000000 s hg38.chr19_GL949753v2_alt 229229 1389 + 796479 CCCTCCTCTGG---CTCTGCCCA--------GCTCCCTGGAGGGAAGCT--CCCGC---TTGAGTCTTTGAGGGG-------AATAGGATCCTCGGGGAGACTCAGGGCTGCCTGGGGGGAGACCACGCTCCCTCCGAGCCCAGAGGCCTCAGTGACTCACCAGGTGTGGGGGTGGAGCCTGTAGGTGAGAGGCTGGGATCCCCAGAGGGTCCTGGGAATAAGCACAGAAAGGGAGCGAGGCGCTTTGGTGCTGAGTGAG--------------GAAACC------CGTCCCTCCACCTGC-CCGTGGCTTCTCTGGAAACTTTCTTCTGCTCACCTTTCACCATTTGCATCCCAGGAGATGGGGCCAAGTGTGGGCATGCCTGGGGAGC-CCCCGTTGTCCTCCTCCCCTCTGAGGGGTGAGTCTCCCTCTGGCTGAGCCCCCCTCAAACCCTCCCCCC--CGCACCGCGACTCCATCCCAGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAGCTTGGACAGGACAG--GGTCAGGGCCCTCACCTGAGACCACGAGCTCCTGGGGGTAACTAGGGCTGGACAGCAGGTAG--GGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACTCATGGAGAATTCAGCCTGGTGTCTATAAGACTGGTACTTTGACTTTAGACACAGCGGGGGATGGGCTGCCCCCTCCTTGGTCAAAAAGAAAGTGTCTATCTGATGCCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCTTGGGGCCCGGCTGCACCGAGAGGGCGGGTATGTCAGGGATCAGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCCACCTTGC---------TCTGAGCTGAG-----------ACCTCCCCAGGC---CTCTCTAGGA------GCC----TCTGT------CTCTGTTTTCT--CTGAGT-------CTTCCCCTCCCCACCCATCCCCTGTC-TCTGTCTGTCTCTCCCTCC-CTTGGGACCACCCCCCC---GCCTCA--------TCCCGGCCATCA-CTAATTGGATTC----------------CCCCGGCAGGGCCTGTGCGGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGGGGGCCGACCACCTAGGGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCTGGCCAGAGCCCTGGACGAGGTCATGTTCCCCCTCCTTGTACAGAACGAATATGTCATAGCCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCGCGGGCCACGACAGAGCCCTGCGGGATCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAA--GAGGAATTGGGACTTGGAAGGC s panTro4.chr19 59169079 1394 + 63644993 CCCTCCTCTGG---CTCTGCCCA--------GCTCCCCGGAGGGAAGCT--CCCGC---TTGAGTCTTTGAGGAG-------AATAGGATCCTCGGGGAGACTCAGGGCTGCCTGGGGGGAGGCCGCGCTCCCTCCGAGCCCAGAGGCCTCAGTGACTCACCAGGTGTGGGGGTGGAGCCTGTAGGTGAGAGGCTGGGATCCCCAGAGGGTCCTGGGAATAAGCACAGAAAGGGAGCGAGGCGCTTTGGTGCTGAGTGAG--------------GAAACC------CGTCCCTCCACCTGC-CCGTGGCTTCTCTGGAAACTTTCTTCTGCTCACCTTTCACCATTTGCATCCCAGGAGATGGGGCCAAGTGTGGGCATGCCTGGGGAGC-CCCCGTTGTCCTCCTCCCCTCTGAGGGGTGAGTCTCCCTCTGGCTGAGCCCCCCTCAAACCCCCCCCCCACCCCACCGCGTCTCCATCCCAGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAGCTCGGACAGGACAG--GGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTGGACAGCAGGTGG--GGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCCGGGCTGAGGTCACAGGACTCATGGAGAATTCAGCCTGGTATTTATAAAACTGGTACTTTGACTTTAGACACAGCGGGGGATGGGCTGCCCCCTCCTTGGTCAAAAAGAAAGTGTCTATCTGACGCCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCACCGAGAGGGAGGGTCTGTCAGGGATCAGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCCACCTTGT---------TCTGAGCTGAC-----------ACCTCCCCAGGC---CACTCTAGGA------GCC----TCTGT------CTCTGTTTTTT--CTGAGT-------CTTCCCCTCCCCACCCATCCCCTGTC-TCTCTCTGTCTCTCCCTCC-CTTGGGACCACCCCCCCCCCGCCTCA--------TCCCGGCCATCA-CTAATTGGATTC----------------CCCCGGCAGGACCTGTGCAGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACCTAGGGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGACCCCCGTAGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCTGGCCAGAGCCCTGGACGAGGTCATGTCCCCCCTCCTTGTACAGAACAAATCTGTCATAGCCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCGCGGGCCACGACAGAGCCCTGCGGGATCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAA--GAGGAATTGGGACTTGGAAGGC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60108502 1390 + 64156825 CCCTCCTGTGG---CTCTGCCCG--------GCTCCCTGGAGGGAAGCT--CGTGC---TTGAGTCTTTGAGGGG-------AATGGGATCCTCCAGGAGACTCAGGGCTGCCCTGGGGGAGGCCGTGCTCCCTCTGAGCCCAGA--TCTCAACGACTCACCAGGTGTGGGGGTGGAGCCTGTGGGTGGGGGGCTGGGGTCCCCAGAGGGTCCTGGGAATAAGCACAGGCAGGGAGTGAGGAGCTTTGGTGCTG---GAGTCCCCTCCTCCACTGAGACC------CCTCCCTCCACCTGCTCTGTGGCTTCTCCGG-AACTTCCTTCTGCTTACCTTTCACCTTTTGTGTCCCAGGAGATGGGGCCAAGGGTGGGCGTGCCTGGGGTGC-CCCCACTGTCCTCCTCCCCTCTGAGGGGTGAGTCCCCCTCTGGCTGAGCCTCCC---ATCACGACCCCC--CCAACCCCGACTCCATCCTAGCCCAGAGCTCTCCTAGGGGCAGGGT-CCGAGCTGAGCCTTTGAGCTCGGACAGAACAG--GGTCAGGGTCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAG--GGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACTCATGGAGAATTCAGCCTGGTATGTATAAGACTGGTACTTTGACTTTAGACGCAGCGGGGGATGGGCCGCACCCTCCTTGGTCAAAAATAAAGTGTCTATGTTGTGCCATGATTGACACAACAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGACGGAGGGTGTGTCACGGATCAGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCTCACCTTAT---------TCTGAGCTGAG-----------ACCCCCCCAGGC---CTCTCTGGGA------GCC----TCTGT------CTCTGTTTTCT--CTGAGT-------CTCCCCCTCCCCACCCATCCC--ATC-TCTGTCTGTCTCTCCCTCC-CTTGGGACGCCCCCACC----CCTCA--------TCCCGGCCATCA-CTAACTGGATT-----------------CCCCGGCAGGGCCGGTGCAGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGACACTGGGGGCCGACCACTTAGGGGAGAGGTTGTGTCCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGCGCTCAGGGTGAAGCTGGCCTGGGAGAGCCCAGCCTGGGGTTGCTGACCAGGGCGCTGGAGGAGGACATGTCCCCCCTCCTGGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCACGGGCCACCACAGGGCCCTGCGGGGCCAGGAGGGAGGGCTTCCTAGACACGCCTGGA-GGAAA--GACGAGTTGGGACTCCGAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55136151 1391 + 59248254 CCCTCCTGTGG---CTCTGCCCG--------GCTCCCTGGAGGGAAGCT--CGTGC---TTGAGTCTTTGAGGGG-------AATGGGATCCTCCAGGAGACTCAGGGCTGCCCTGGGGGAGGCCGTGCTCCCTCTGAGCCCAGA--TCTCAACGACTCACCAGGTGTGGGGGTGGAGCCTGTGGGTGGGGGGCTGGGGTCCCCAGAGGGTCCTGGGAATAAGCACAGGCAGGGAGTGAGGAGCTTTGGTGCTG---GAGTCCCCTCCTCCACTGAGACC------CCTCCCTCCACCTGCTCTGTGGCTTCTCCGG-AACTTCCTTCTGCTTACCTTTCACCTTTTGTGTCCCAGGAGATGGGGCCAAGGGTGGGCGTGCCTGGGGTGC-CCCCACTGTCCTCCTCCCCTCTGAGGTGTGAGTCCCCCTCTGGCTGAGCCTCCC---ATCACGACCCCC--CCAACCCCGACTCCATCCTAGCCCAGAGCTCTCCTAGGGGCAGGGT-CCGAGCTGAGCCTTTGAGCTCGGACAGAACAG--GGTCAGGGTCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAG--GGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACTCATGGAGAATTCAGCCTGGTATGTATAAGACTGGTACTTCGACTTTAGACGCAGCGGGGGATGGGCCGCACCCTCCTTGGTCAAAAATAAAGTGTCTATGTTGTGCCATGATTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCCGCACTGAGACGGAGGGTGTGTCACGGATCAGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCTCACCTTAT---------TCTGAGCTGAG-----------ACCTCCCCAGGC---CTCTCTGGGA------GCC----TCTGT------CTCTGTTTTCT--CTGAGt-------ctccccctccccacccatccc--atc-tctgtctgtctctccctcC-CTTGGGACGCCCCCACC----CCTCA--------TCCCGGCCATCA-CTAACTGGATT-----------------CCCCGGCAGGGCCGGTGCAGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATATCCAGGGGGACACTGGGGGCCGACCACTTAGGGGAGAGGTTGTGTCCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGTTGCTGGCCAGGGCGCTGGAGGAGGACATGTCCCCCCTCCTGGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCACGGGCCACCACAGGGCCCTGCGGGGCCAGGAGGGAGGGCTTCCTAGACACGCCTGAAGGGAAA--GACGAGTTGGGACTCCGAGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47221832 1387 + 51301725 CCCTCCTGTGG---CTCTGCCTG--------GCTCCCTGGAGGGAAGCT--CGTGC---TTGAGTCTTTGAGGGG-------AATGGGATCCTCCGGGAGACTCAGGGCTGCCCTGGGGGAGGCCGTGCTCCCTCTGAGCCCAGA--TCTCAGCGACTCACCAggtgtgggggtggagcctgtgggtggggggccggggtccccagagggtcctgggAATAAGCACAGGCAGGGAGTGAGGAGCTTTGGTGCTG---GAGTCCCCTCCTCCACTGAGACC------CCTCCCTCCACCTGCTCTGTGGCTTCTCCGG-AACTTCCTTCTGCTTACCTTTCACCTTTTGTGTCCCAGGAGATGGGGCCAAGGGTGGGCATGCCTGGGGTGC-CCCCACTGTCCTCCTCCCCTCTGAGGGGTGAGTCCCCCTCTGGCTGAGCCTCCC---ATCACGAccccc--ccAACCCCGACTCCATCCCAGCCCAGAGCTCTCCTGGGGGCAGGGT-CCGAGCTGAGCCTTTGAGCTCAGACAGAACAG--GGTCAGGGTCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAG--GGGTAGGACCTGACTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACGTATAAGACTGGTACTTTGACTTTAGACGCAGCGGGGGATGGGCCGCACCCTCCTTGGTCAAAAGTAAAGTGTCTATGTTGTGCCATGATTGACACAACAGGGTCACGTTCTCTCCtgaggccaccgtggggcccggccGCACTGAGACGGAGGGTGTGTCACGGATCAGTTCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCCACCTTAT---------TCTGAGCTGAG-----------ACCTCCCCAGGC---CTCTCCAGGA------Gcc----tgtgt------ctctgttttct--ctgagt-------ctccccctccccacccatccc--atc-----tctgtctctccctcc-cttgggacgcccccacc----cctca--------tcccGGCCATCA-CTAACTGGATT-----------------CCCCGGCAGGGCCTGTGCAGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTTAGGGGAGAGGTTGTGTCCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGTTGCTGGCCAGGGCGCTGGAGGAGGACATGTCCCCCCTCCTGGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCGACACTGCAGGGTCAAGCTGCCTCCACGGGCCACCACAGGGCCCTGCGGGGCCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAA--GACGGGTTGGGACTCCGAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46937810 1350 + 50890351 CCCTCCTGTGG---CTCTGCCCG--------GCTCCCTGGAGGGAAGCT--CATGC---TTGAGTCTTTGAGGGG-------AATGGGATCCTCCAGGAGACTCAGGGCTGCCCTGGGGGAGGCCGTGCTCCCTCTGAGCCCAGA--TCTCAACGACTCACCAGGTGTGGGGGTGGAGCCTGTGGGTGGGGGGCTGGGGTCCCCAGAGGGTCCTGGGAATAAGCACAGGCAGGGAGTGAGGAGCTTTGGTGCTG---GAGTCCCCTCCTCCACTGAGACC------CCTCCCTCCACCTGCTCTGTGGCTTCTCCGG-AACTTCCTTCTGCTTACGTTTCACCTTTTGTGACCTAGGAGATGGGGCCAAGGGTGGGCGTGCCTGGGGTGC-CCTCACTGTCCTCCTCCCCTCTGAGGGGTGAGTCCCCCTCTGGCTGAGCCTCCC---ATCACGACCCCC--CCAACCCTGACTCCATCCCAGCCCAGAGCTCTCT------------------------------------------CAG--GGTCAGGGTCCTCACCTGAGACCACGAGCTCCAGGGGGTAACTAGGGCTTGACAGCAGGTAG--GGGTAGGACCTGATTGCGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTATGTATAAGACTGGTACTTTGACTTTAGACGCAGCGGGGGATGGGCCGCACCCTCCTTGGTAAAAAATAAAGTGTCTATGTTGTGCCATGATTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTTGGGCCCGGCCGCACTGAGATGGAGGGTGTGTCACGGATCAGTACTGGAGAGGAGGAG------GATGGGTGAGGGGCTACCCCACCTTAT---------TCTGAGCTGAG-----------ACCTCCCCAGGC---CTCTCTAGGA------GCC----TCTGT------CTCTGTTTTCT--CTGAGt-------ctccccctccccgcccatccc--atc-tctgtctgtctctccctcC-CTTGGGACGCCCCCACC----CCTCA--------TCCCGGACATCA-CTAACTGGATT-----------------CCCCGGCAGGGCCTGTGCAGAGCCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCTGACCACTTAGGGGAGAGGTTGTGTCCGCCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGTTGCTGGCCAGGGCGCTGGAGGAGGACATGTCCCCCCTTCTGGTACAGAGCGAATCTGTCGTAGCCGACATCAGAGCGACACTGCAGGGTCAAGCTGCCTCCACGGGCCACCACAGGGCCCTGCGGGGCCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAA--GACGGGTTGGGACTCCGAGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45486753 1352 + 49145316 CCCCGCTCTGT---CTCTGCCCA--------ACTCTCTGGA-GGAGGCG--TGTGC----TGAGTCCGTGAGGGG-------GACAGGATCCTCTGGGAGACTCGGCCCTGCCCTGGGGGAGGCCACGCTCCCTCCCAGCCCAGAGGCCTTAGTCATTCACCA-GTGT-GGGGTGGGACCAGTGGGGGGGGGGCTGGGGCTCCCAGAGGCTTCTGGGAGTAAGCACAGAAAGGGAGTGAGGAGCTTTGGTGCCCCA-GAGTCCCCAGGTCCACTGAAGCC------C-TCGCTCCACCTGC-CTGTCACTTCCCTGGAAACTCTCCTCTGCTCACCTTTCACCATTTGTGTCCCAGGAGATGGGGCCAAGGGTGGGCCTGCCTGGGAGGTGGCCCATTGTCCTCCTCCCCTCTGAGGGGTGAGTCCTGCTCTGGCTGGGCCCCCT---AACA----ACCC--CCTAC----ACTCCATCCCAGCCCAGAGCTCTCCTGGGGACAGACC-CTGAGCTGAACCTTTGAGCTCAGAGAGGACAG--GGTCAGGGGTCTCACCTGGGACCACAAGCTTCAGGGGGTAACTAGCGTCCGACAGCAGGGAG--GGGTAGGAGCTGATTCTGCTGTAGCATCGGTAGGTTCCACCCTGGGCTGAAGTCACAGGACTCATGGGGAATTCAGCCTGGTTCCTATAAGACTGGTACTTTGACTTTAGATGCAGGGTGGGATGGGTTGCTTCCTCCTTGGTCAAAAAGAAACTGTCCACATGGTGCCATGACTGACACAGCAGGGTCACCTTCTCTTCTGAGGCCACTGTGAGGCCCGGCTGTATTGAGAGGGAGGGTCTCGCAGGGATCTATCCTGAAGAGAAGAAG------GATGGGTGAGGGGCTGCCCCGCTTCGT---------TCTGAGCTGAG-----------ACCTCCCCAGGC-CTCTCTCTGGGA------CCCTCAGTCTGT------CTCTGTTT--T--CTGAGT-------CTCCTCCTCCCTA-------------------------------------GGGACG--CCCACC----TCTCA--------TCCCAGCCATCA-CCACCTGGGCTC----------------TCCTGGCAGTGCCTGTGGGGAACCTGGGTCC----CTGACTGAACCCG-----CTGGGCTCCTCACCTGAGATCAGGATGTCCAGGGGGTCACTGGGGGCTGACCAC-TGGAGGAGAGGTTGTGGGCACCGGAGCATCTGTACTGGCCCCCGTGGGAGACCCTTATAGGGCTCAGGGTGAAGCTGGCCTGGGAGAGCCCAGCCTGGAACTTCTGGCCAGAGCCCTGGAGGAGGTTAACTCCCTGGTCCTTGTACAGAGCAAATCTGTCGTAGTCGACATCAGAGCGACACTGCAGGGTCAGGCTGCCTCCATGCGCCACGACGGGGCCCTGCGGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAA--GGGGAGCGGGGACTCGGATGGC i calJac3.chr22 C 0 C 0 s mm10.chr7 3735329 1316 + 145441459 TTCTCTTTTAGGATATTTGCTGGTCTTTGATACTCCC-------AAGCTGACATGA---CTGAG-AAATGAGAAGTGTCATTAACAGGATCT------GGTTTTTAGGCTGCCTGTGTTTGTAGCACTTTTCCTACAA----AGATATGTGTGATACTTACGAATTGGTGGGATGGGCCTTTTGGGAGACCAGGTGGAGGATTCAATGGTTTCTAGGAAACAGAACAAGAA----------------GATGATG----------------------------------TTCTTC--------CTGCTGTTTCCCCTACATATGCCCTC--CTAACTTGTCACAGT-----------------GAGTCAACA------TTACATGAAGGAT-CATTGCTGGTATCCTGTTATGTGCTG-ACGAATGTGCCTATGTCTAACCATTCC-----------TTTT--GTGCCCTTAATCCCACCCCAG-TAAGAGCCCT----GATACAGTGT-TAATTGTAAGTC-----ACACTGACATGTCAG--GACCA----CCTTACCTGAGACTGTGAGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGA--GCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTCGATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCTCCTTGGACAGAATGAAAGTATCCACAGGGTCCATTGACCAACACAGCAGGCTCACGGTCTCTCCTGAGTGCACTGTGTGGTTAGGCTTCACTGAGAGGGAAGGAGTGAGAGGGAGCTGTCCTAAAGAGAAGAGG------CAT-GATGAGAGGCTAGCTT-CCTTGT---------TCTGAGCTCCA-----------ATCACACATGAC-TCCACCCTGAGAAAGTGGGTC----TCTGT------CTCTTTTCTCTGACTGAG--------CTCAACTCCTGTTCTCATCTT----------CTTGTTTCTACTCCTGCTTAGGATT--CCTTTC----TCTCA--------TCCTGGCCATAAGCTCCCCAGCCCCCCCCCCCCCCGCCCCACCCCATTAGAGCCTGAGCAGAGGCTAGGTTC----CTGATTGAGTCTG-----TTAAGTTACTCACCTGTGATCAGGATGTCCAGGGGCTCACTGGAGGCTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACTCACATAGCCCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCTTGTGCAGAGCATATCTGTCATAGTTGATGTCAGAGAAACACTGCAGGGTGAGGGTCATTCCAGGGTCCATGGTATGGCCTTGGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTAGAGACT--GAGGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19719701 1402 - 122678785 CCCTCTCCTGG---C----CCCA--------GGTCCT----GTGGAACC--ACTGCACTGTAAACATTTAAAGTG-------CAGAGAATC----AGCAAAGTTCAGCCTAGGCCTGGGAAGGCTGTGTTTCCTGCAGGCTAAGAAGACTC--TAATCCAGCAGACATGAAGCTTGTCCATG-GGGTGAGGGCCTGCAGTCTCCAAATGCTGCTTAGAACAAG---AAGCAGGCTGTGGG--GCTGTGGTG------GCTCCCTCTGTTCTCCTCACCCCACCGTACCTCCTCACAGTTCCTTTATAG--TCTTCAG--TCTCCTCCCCACTCGCCTGGCTCTGCCTCTTTTCCTCTGGTGTAGGTAAGACATGAACATGGCATGGA----CTCTGTTTTTTTTATTCCTGATAAGAG--GGATCATCCAATGGTTGGGCTCCTT---AATT----CCCT--C---------TTCCATTCCAGCCCAGATCTCTGC-AAGGACAGGCCAATGACCCGAGCATCTTGGCCATCAAAGGACAAATGAGTGGACCTCTCACCTGAGACAAGGAGCTCCAGGGAGTCACTGGGACTTGACAACAGGTAG--GGGGAGGAGTTGTGTGAGCTGTAGCACCTGTAGGTCCCCTGGTGGTCTGAGGTCACAGGATTCAGGGTGAAGTTGACCTCATACGGTATAGCTGTATCCTGCAGATGAAGGTGCTGGGGAGGAGCAAGGGACCCCTCCTTGGACAGGTGGAAGGTATTGAACCAGATCTCAGAGCGACACTGCAGGGTCACATTCTCTCCCCAGGATACTGAAGGCCCAGGCTGGGCTGAGAGGGATGGTTTT---GGGTATATTCCTGGGGAAAAGGAAGGTCGTGATGTGTAGAGGCCTGCCTCTCCACATATGCCCTTGACCCAGCTGGGGGACCACCTTCGTCTCTCCAGAGACTCTGTGTGGGA------CCC----CCTCTCAGCTCCTCTTGTCTCT--CTGAGTGGATGTCCTTCATCTCCATGACCCTCACCGGCCATTTTTCAGCCCCTGTC----CCTAGAACATGGCCCCA----TCTCAGCCTGTGCTCCTGACCCT---CTCCCCGGACCCCATC------------ACCCAGGGGTGACAGTG--GCCCCTGAGCCTTCAGCAGACAGGACATGGGGCAGGGGGCTTCTCACCTGTGATCAGGATGTCCAGAGGGGCACTGGGTGCTGACCACGTGGAGGAGAGGTTGTGTCCACTGTAGCACCTGTACCGGCCCCCGTGGGTGCGGCTCACAGGGTCCAGGGGGAAGTCGG--------------GGCTGGGTTGACCATCCAGA-TGCTGGGCAGGTCTGAGCTCCTCATCCTTGGTCAGAGCGAATCTATCAAAGCCAGCTTCTGAGTGACACTGCAGGGTCAGGTTGTCTCCAGAATGAACCAATGAGCCTGGCTGAGCTGAGAGGGAGGGCTCCCTGTAGGCACCTGCATGGAAG--GGCACAGTGACACTGAGGGGAC i canFam3.chr1 I 15761 T 15875 e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=169027.000000 s hg38.chr19_GL949753v2_alt 230618 97 + 796479 TGGTTCCTCCCCCGCCCCTTCCTTCTCCCGTCCTGGCGTCCTGGCCC---TGCAGGTCTCACTGTCTCTCACGCTCTGTGTCTCGGATCCCGGGGTCTCC s panTro4.chr19 59170473 97 + 63644993 TGGTTCCTCCCCCACCCCTTCCTTCTCCCGTCCTGGCGTCCTGGCCC---TGCAGGTCTCACTGTCTCTCACGCTCTGTGTCTCGGATGCCGGGGCCTCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60109892 89 + 64156825 TGGTTCCTCCTCTGCCCCTTCCTTCTCC--------CGTCCTGGCCC---TGCAGGTCTCACTGTCTCTCACGCTCTGTGTCTCGGATCCCAGGGGCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137542 89 + 59248254 TGGTTCCTCCTCTGCCCCTTCCTTCTCC--------CGTCCTGGCCC---TGCAGGTCTCACTGTCTCTCACGCTCTGTGTCTCAGATCCCAGGGGCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223219 89 + 51301725 TGGTTCCTCCTCTGCCCCTTCCTTCTCC--------CGTCCTCGCCC---TGCAGCTCTCACTGTCTCTCACGCTCTGTGTCTCGGATCCCAGGGGCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939160 89 + 50890351 TGGTTCCTCCTCTGCCCCTTCCTTCTCC--------AGTCCTGGCCC---TGCAGGTCTCACTGTCTCTCACGCTCTGTGTCTCAGATCCCAGGGGCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488105 89 + 49145316 TGGTTCCTCCCACGCCCCTTCCTTCTCC--------TGTCCTGGCCC---TGCAGGTCTCAGTGTCTCTCACACTCTGTGTCTCGGACCCCAGGGGCTCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3736645 57 + 145441459 TTATTCTTACCAAACACCTTTGCCCTCC--------CCT-CTGGCCCTTGTGCATGTCCCCT----------------------------------CTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 102772351 85 + 122678785 TGATTCTCCCCAAA--CTTCCCTTCTCC--------CATTCTGATT----TCTGGGTCTCA-TGTCCCTCACCCTCTGTGTCTCTGACCTGTGAGCCCCC i canFam3.chr1 n 15875 I 293 e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=27165.000000 s hg38.chr19_GL949753v2_alt 230715 16 + 796479 TTCTCACCTGGGTCTG s panTro4.chr19 59170570 16 + 63644993 TTCTCACCTGGGTCTG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60109981 16 + 64156825 TTCTCACCTGGGTCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137631 16 + 59248254 TTCTCACCTGGGTCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223308 15 + 51301725 TTCTCACC-gggtctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939249 16 + 50890351 TTCTCACCTGGGTCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488194 15 + 49145316 TTCTCACCTGGG-CTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3736702 16 + 145441459 TCCCCAGTCAGGGCAG i mm10.chr7 C 0 C 0 e canFam3.chr1 102772436 293 + 122678785 I e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=21952.000000 s hg38.chr19_GL949753v2_alt 230731 8 + 796479 TCTTGGAG s panTro4.chr19 59170586 8 + 63644993 TCTTGGAG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60109997 8 + 64156825 TCTTGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137647 8 + 59248254 TCTTGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223323 8 + 51301725 tcttggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939265 8 + 50890351 TCTTGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488209 8 + 49145316 TCCTGGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3736718 8 + 145441459 TGTTCGAG i mm10.chr7 C 0 I 101 s canFam3.chr1 19705228 8 - 122678785 CCTTGGAG i canFam3.chr1 T 15875 C 0 e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=409250.000000 s hg38.chr19_GL949753v2_alt 230739 268 + 796479 TAGTTCCAGACCGATAGTGTCTCTCTGACTCCTGGCCACTGTCTGTCTGGTCTGTCCTCTCCTCATTGAGGGACAGGAAATTGCAGCAAATACACCCATTGCCTTCCTGAGTCGACCCC-TTCCAGGTGAGGGTGACTCAGGCTCCTGTTTCCCCATCTGAGCCTCCCCGTGGGGTCTTCCTCACGCCTTCAGCCCATCCATCAACACATCCTTCTGGGGTCCTTGCCATGATCAGTCATCAACCAAACTCCCAACAACCTATCTGGTT s panTro4.chr19 59170594 268 + 63644993 TAGTTCCAGACCGATAGTGTCTCTCTGACTCCTGGCCACTGTCTGTCTGGTCTGTCCTCTCCTCATCGAGGGACAGGAAATTGCAGCAAATACACCCATTGCCTTCCTGAGTCGACCCC-TTCCAGGTAAGGGTGACTCAGGCTCCTGTTTCCCCATCCGAGCCTCCCCGTGGGGTCTTCCTCACGCCTTCAGCCCATCCATCAACACATCCTTCTGGGGTCCTTGCCATGATCAGTCATCAACCAAACTCCCAACAACCTATCTGGTT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60110005 264 + 64156825 AAATTCCAGATCACTAGTGTCTCCCTGGCTCCCGGCCACTGCCTGTCTGGTCTGTCCTCTCCTCACAGGGGGACAGGAAATTGCAGCAGATACACCCAGTGCCTCCCTGAGTTGACCCCTTTCCAGGTGAGGGTGACTCAGGCTCCTCTTTCCCTATC-GAGCCTCCCCATGGGGTCTTCCTCACAGCTTCAGCCCATCCATCAGCACATCCTCCTGGGGTCCTGGCCATGATCAGTCAT----CAAACTCCCAACAACCTATCTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137655 268 + 59248254 AAATTCCAGATCACTAGTGTCTCCCTGGCTCCTGGCCACTGCCTGTCTGGTCTGTCCTCTCCTCACAGGGGGACAGGAAATTGCAGCAGATACACCCAGTGCCTTCCTGAGTTGACCCCTTTCCAGGTGAGGGTGACTCAGGCTCCTCTTTCCCTATC-GAGCCTCCCCATGGGGTCTTCCTTGCAGCTTCAGCCCATCCATCAGCACATCCTCCTGGGGTCCTGGCCATGATCAGTCATCAACCAAACTCCCAACAACCTATCTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223331 268 + 51301725 aaattCCAGACCACTAGTGTCTCCCTGGCTCCTGGCCACTGTCTGTCTGGTCTGTCCTCTCCTCACAGGGGGACAGGAAATTGCAGCAGATACACCCAGTGCCTTCCTGAGTTGACCCCTTTGCAGGTGAGGGTGACTCAGGCTCCTCTTTCCCTATC-GAGCCTCCCCATGGGGTCTTCCTCACAGCTTCAGCCCATCCATCAGCACATCCTCCTGGGGTCCTGGCCATGATCAGTCATCAACCAAACTCCCAACAACCTATCTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939273 268 + 50890351 AAATTCCAGACCCATAGTGTCTCCCTGGCTCCTGGCCACTGTCTGTCTGGTCTGTCCTCTCCTCACAGGGGGACAGGAAATTGCAGCAGATACACCCAGTGCCTTCCTGAGTTGACCCCTTTCCAGGTGAGGGTGACTCAGGCTCCTCTTTCCCTATT-GAGCCTCCCCATGGGGTCTTCCTCACAGCTTCAGCCCATCCATCAGCACATCCTCCTGGGGTCCTGGCCATGATCAGTCATCAACCAAACTCCCAACAACCTATCTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488217 260 + 49145316 AGGTTCCAGACC---AATGTCTCCCTGACTCCCGGCCACT--CTGTCTGGTCCGTCCTCATCTCATCGAGGGACAGGACATCGCAGCAAATACACCCAGTGCCTTCCTGAGTTGACCCT-GTCCAGGTGCGGGTGACTGAGGCTCCTCTTTCCCTATGAGAGCCTCTGCATGGGGTCCTCCTCACACCATCAGCCCGGCCCTCA--ACATCCTTCTGGGGTCCTGGCCACGATCAGTCATCAACCAGACTCCC-ACAGCCGATCTGGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19705236 87 - 122678785 ---------------------TCTCTGACCTGTGACCCCT----------------------------------------------------------------------GTGGTCCCC--------------TGACCCACCCT--------CACATC------------TGGGGCTTCCCTGGTAGGTT---------------------------GGCCCCTGA------------------------------AACTTGTCTGGTG i canFam3.chr1 C 0 I 15934 e mm10.chr7 3736726 101 + 145441459 I e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=33863.000000 s hg38.chr19_GL949753v2_alt 231007 22 + 796479 CCCCAAAATTATATAAAGAAGT------ s panTro4.chr19 59170862 22 + 63644993 CCCCAAAATTATATAAAGAAGC------ i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60110269 22 + 64156825 CCCCAAAATTATATAAAGAAGC------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137923 22 + 59248254 CCCCAAAATTATATAAAGAAGC------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223599 22 + 51301725 CCCCAGAATTATATAAAGAAGC------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939541 22 + 50890351 CCCCAAAATTATATAAAGAAGC------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488477 22 + 49145316 CCTCTCAATTGTATAAAGAAGC------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 19721257 22 - 122678785 -CCCAGG-----AGAAAGATGGGGTGCA i canFam3.chr1 I 15934 C 0 e mm10.chr7 3736726 101 + 145441459 I e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=517922.000000 s hg38.chr19_GL949753v2_alt 231029 260 + 796479 GTGGTGGCTTTTTCACCTGGGACCAGAATCTCCAGGAGGTCACTGGGGTTCGACCACACCTGAGGGTTTTTCCTGTAATAGTAATAGCATCTGAACCTCCACCTGCAGCTGGGGGTCACGGGACCCACAGGGAACAGGGCCTGGGATGGCCCTTTGGGG---AGCTTCTGTGAGTACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAGTCCGTCCAGTGTATCACACTGGAGGGTCACATTTCC s panTro4.chr19 59170884 260 + 63644993 GTGGTGGCTTTTTCACCTGGGACCAGAATCTCCAGGAGGTCACTGGGGTGCGACCACACCTGAGGGTTTTTCCTGTAATAGTAATAGCATCTGAACCTCCACCTGAAGCTGGGGGTCACGGGACCCACAGGGAACAGGGCCCGCGATGGCCCTTTGGGG---AGCTTCTGTGAGTACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAGTCCGTCCCGTGTATCACACTGGAGGGTCACATTTCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60110291 260 + 64156825 CTGGTGGCCTTTTCACCTGGGACCAGAATCTCCAGGGGGTCACTGGGGTTCGACCACGCCTGAGGGTTTTTCCTGTAGTAGTAATAGCATCTGAACCTCCACCTGGAGCTGGGGGTCACGGGACCCACAGGGAACAGGGCCTGGGATGGCCCTTTGGGG---AGGTTCTGTGAGTACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAATCCGTTCCGTATATCACACTGGAGGGTCACGTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55137945 260 + 59248254 CTGGTGGCCTTTTCACCTGGGACCAGAATCTCCAGGGGGTCGCTGGGGTTCGACCACGCCTGAGGGTTTTTCCTGTAGTAGTAATAGCATCTGAACCTCCACCTGGAGCTGGGGGTCACGGGACCCACAGGGAACAGGGCCTGGGATGGCCCTTTGGGG---AGGTTCTGTGAGTACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAATCCGTTCCGTATATCACACTGGAGGGTCACGTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223621 260 + 51301725 CTGGTGGCCTTTTCACCTGGGACCAGAATCTCCAGGGGGTCGCTGGGGTTCGACCACGCCTGAGGGTTTTTCCTGTAGTAGTGATAGCATCTGAACCTCCACCTGGAGCTGGGGGTCACGGGACCCACAGGGAACAGGGCTTGGGATGGCCCTTTGGGG---AGGTTCTGTGAATACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAATCCGTTCCGTATATCACACTGGAGGGTCACATTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939563 260 + 50890351 CTGGTGGCCTTTTCACCTGGGACCAGAATCTCCAGGGGGTCGCTGGGGTTCGACCACGCCTGAGGGTTTTTCCTGTAGTAGTAATAGCATCTGAACCTCCACCTGGAGCCGGGGGTCATGGGACCCACAGGGAACAGGGCTTGGGAAGGCCCTTTGGGG---AGGTTCTGTGAATACAGGGTCCTGGGGAGCTTCTGTTC----TTCCTCAACAAGAACAAACGT------GAGAAATCCGTCCCGTATATCACACTGGAGGGTCACATTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488499 236 + 49145316 GCAGCGGCTTTTTCACCTGGGACCAGAATCTCCAGGAGATCGCTGGGGATCGACCACACATGAGGTTTTTCCCAGAAATGGGAATAGCATCTGAACCTCCATCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGGACGGCCCTTTGGGG---AGCTTCTGT------------------------TCTCC----TTCCTCAACAAGAACAAACAT------GAGAAATCCGTTCCGTGTGTCGCACTGGTGGGTCATGTTCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3736827 259 + 145441459 GTGGGGACTT----ACCTGAGATGAGTATTTGTTGAAGAGCACTAGGTACTGACCACAGCTGTGGGGCATTCTTGTAGTAACCATAACATCTGAATGTCCCTGTGTGGGTTGGGGTTGTGGGTCCTATAATAAACAGGGCTCGGTACTGTCTACTAGAAGATATATGCTCTGTGTCCAGTGAGCTGGTGAATTTCTTATC----TTCCTTGGTGAGAATGAATTTATCGTAGTGAAAGTC------TGAGGCACAGTGGAGTGTCATGTTCCC i mm10.chr7 I 101 C 0 s canFam3.chr1 19721279 260 - 122678785 GCAGGGACTGCCTCACCTGTGACCTGAAGGTGCAGGGGGTCACTGGGGTGTGACCATGAATACGGGTACGACTGTTGAGAAATGTAGCATCTGTAGGTGCCCCCATGGGAGGTGTTCACAGGGCCCACAGGGAAGAGTGCCCGGTA---CCTCTCACGA---AGGATCGTCAAATCCAG-GTGTTGGGGCACATCAGCTCCCTGCTCCTTCAGCAGATGGAATGA------GTACCATGGGTAACGTGAACTACAGGAGAGGGACATGTTCAC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4213827 886 - 60714840 I e nomLeu3.chr10 102820226 18970 - 106955855 T a score=576747.000000 s hg38.chr19_GL949753v2_alt 231289 220 + 796479 TCCTGAGGCCACCACAGGACTCGGCAGGGCTAAAAGAGTGGGTTC------TGCATAGAATCCTAGCAGAGAAGGAGGCA--CGTCTTAAGTGGGGCTCCGACCTCCCACATCATCCCCAGG---GCTGGGCTGTGAGAGGTAGACGTCCCTAAGAGC-----CGACCCTCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCGCCACCAGCTCCA s panTro4.chr19 59171144 220 + 63644993 TCCTGAGGCCACCACAGGACTCGGCAGGGCTAAGAGAGTGGGTTC------TGCATAGAATCCTAGCAGAGAAGGAGGCA--CGTCTTAAATGGGGCTCCCACCTCCCACATCATCCCCAGG---GCTGGGCTGTGAGAGGTAGACGCCCCTAAAAGC-----CGACCATCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCGCCACCAGCTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4214713 221 - 60714840 TCCTGAGGTCACAAGAGGACTCGGCAGGGCTGAGAGGGTGGGTTT------GCTGTAGGCTCCTAGGAGAGAAGGAGGCA-CCATGTTAAATGGGGCTCACACCTCCCACATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGC-----CGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCATCACCAGCTCCA i ponAbe2.chr19 I 886 C 0 s rheMac3.chr19 60110551 221 + 64156825 TCCTGAGGCCACCACAGGGCTGGGCAGGGCTAAGAGAGTGGGCTC------TGCATAGAATCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGACTCACAACTCCCGCATCATCCCCAGG---GATGGGCTGTGAGAGGGAGACGCCCCTGAGAGC-----CGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138205 221 + 59248254 TCCTGAGGCCACCACAGGGCTGGGCAGGGCTAAGAGAGTGGGCTC------TGCATAGAATCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGACTCACATCTCCCACATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGC-----CGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47223881 221 + 51301725 TCCTGAGGCCAccacagggctgggcagggctaAGAGAGTGGGCTC------TGCATAGAATCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGACTCACATCTCCCGCATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCTCCTGAGAGC-----CGACCCCCTTCCTGAGGGCAGAGCCTGGGGTTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46939823 221 + 50890351 TCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGCTC------TGCATAGAATCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGACTCACATCTCCCGTATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGC-----CGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488735 202 + 49145316 TCCTGAGGCCACCACAGGGC-GGGCAGAGCTGAGAGGGTGGATTC------TGCATAGAATCCTAGGGAAGAAGGAGGCA-ACGTGTTTAATGGGG-TCACACCTCCCGCCGTATCCCCAAG---ACTGGGCTGTGAG-----------------AGC-----CGATCTCCTTCATGAGGGCAGAGCCTGTGGCTGGGGCCCCTGAGTGTC-------------ACCTCACCTGTCACCACCAGCTCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3737086 206 + 145441459 TCCTGCTGTCACCACAGGGCTGGGCAGTACTGACAGCCTGGGTTCATAGTATTCATAGATTCCTAGGAGAGAAGGAAGCC-GTCTCTTACATGCT-CTCACACCGTCCCAGTGTTCTCTTGC---AATACTTTGTGGGAAGGGAAGAC------------------------TCCTAGGAGCAGAGCCTGGGGTTGAGA-ATCTGACTGTC-------------CCCTCACCTGTCACCACCAGCTCCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19721539 227 - 122678785 TCCTGAGGCCACCACAGGGCCTGGGTTAACTGAGAGGGTGGGTGC------CCCAAATACTCCTGAGAGAGAAGGAGGGAGCTATGTTACAGCGGGCAGTCAACCCATGTA----CTCCATGTACTCTGTGCTGTGAGCAAGGGGT-CCCCTGAGACCACATTCCATTCTCTTC----------AGCCTGGAGGAGGGGCCCCAGAG-GTCGGGTCAGCACCTGCCCTTACCTGTCACCACCAGGGTCA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102820226 18970 - 106955855 T a score=214518.000000 s hg38.chr19_GL949753v2_alt 231509 62 + 796479 GGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCATAGTAGCAGCGGTATCGCCCTGCA s panTro4.chr19 59171364 62 + 63644993 GGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCATAGTAGCAGCGGTATCGCCCTGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4214934 62 - 60714840 GGGGGTCGCTGGGCTGTGACCAGCCTGCAGGGCTGCGATAGTAACAGCGGTATCTCCCTGCA i ponAbe2.chr19 C 0 I 11 s nomLeu3.chr10 102801256 62 - 106955855 GGGGGTCACTGTGCTCTGACCAGTGAGGGCCGTTGCCATAGTAACAGTGATATCACCCTGTG i nomLeu3.chr10 T 18970 I 5 s rheMac3.chr19 60110772 62 + 64156825 GGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCAAAGTAGCAGCGGTATCGCCCTGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138426 62 + 59248254 GGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCAAAGTAGCAGCGGTATCGCCCTGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224102 62 + 51301725 GGGGGTCACTGGGCTCTGACCAGCCTGCAGGGGTCTCAAAGTAGCAGCGGTATTGCCCTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940044 62 + 50890351 GGGGGTCACTGGGCTCTGACCAACCTGCAGGGGTCTCAAAGTAGCAGCGGTATTGCCTTGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488937 60 + 49145316 TGGGGTCACTGGGCTCTGACCAGCCTGCA--GGTCTCATAGTAGCAGCGGTACTGCCCTGCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3737292 62 + 145441459 GGGTGTCACTGGGCTGTGATCAACCAGCTGAGCTGTAACAATAACAGCGATATTGCCCTGCA i mm10.chr7 C 0 I 2 s canFam3.chr1 19721766 62 - 122678785 GGAGGTCACTCCGCTGTGACCAGCTCTTCCTGCTCTGATATGCACACTGGTATCGCCCTGCC i canFam3.chr1 C 0 C 0 a score=2651.000000 s hg38.chr19_GL949753v2_alt 231571 11 + 796479 CTGTCATACAC s panTro4.chr19 59171426 11 + 63644993 CTGTCATACAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102801323 6 - 106955855 CTATGA----- i nomLeu3.chr10 I 5 C 0 s rheMac3.chr19 60110834 11 + 64156825 GTGCTGTACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138488 11 + 59248254 GTGCTGTACAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224164 11 + 51301725 GTGCTGTACGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940106 11 + 50890351 GTGCTGTACAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45488997 11 + 49145316 GCATCAAATCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3737356 9 + 145441459 TTGTTGTGT-- i mm10.chr7 I 2 C 0 s canFam3.chr1 19721828 8 - 122678785 ---TCATGTGC i canFam3.chr1 C 0 I 3 e ponAbe2.chr19 4214996 11 - 60714840 I a score=656268.000000 s hg38.chr19_GL949753v2_alt 231582 211 + 796479 CGTGGATGGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCTTCCGGGCCCATGGGAGTCCCTCCTTATCCAGACGGTACTCCTCAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGCTTCCCCCGAGCTATCACAGAGGCTGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGTGCCTAGAATGGAATCAGAG s panTro4.chr19 59171437 211 + 63644993 CGTGGATAGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCTCCCAGGCCCATGGGAGTCCCTCCTTATCCAGACGGTACTCCTCAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGCTTCCCCCGGGCTATCACAGAGGCTGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGTGCCTAGAATGGAATCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4215007 211 - 60714840 CATGGATGGGATGGAAAATCTGGCCTTGTTTTTGGGCTCCAGTGGGTTCTGTCTGTCCCAGGGTGCTGAGCTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGATCACAGGGCTTCTCCAGATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGGCCCTGGAAGGAAATCGGAG i ponAbe2.chr19 I 11 C 0 s nomLeu3.chr10 102801329 209 - 106955855 CATGGATGGAATGGTGAATGTGCCTTTGTTCCCAACCTCCAGTGGGTCCTTTCTGTTCCAGG-CATTGATCTTCCCTCTTTAGACAGAGCATACTCTTGAGCCTCCAGGATCCCCTGACACCACACGGTAATGGGCCTTGCCCAGGTGATCACAGAGCCCGGCTCAGCCCAGAGGGTGGGTTT-GGGAGGGTTCCTAGAATAAAATCAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60110845 211 + 64156825 CGCGGAGCGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCCCCCAGGTCCACGGGAGTCCCTCCTGATCCAGACGGTACTCCTGAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGGCTCCCCCTTATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGGGGGTGCCTAGAATGGAATCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138499 211 + 59248254 CGCGGAGCGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCCCCCAGGTCCATGGGACTCCCTCCTGATCCAGACGGTACTCCTGAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGGCTCCCCCTTATGATCACAGAGCCTGGCTCAGCCCAGAGGGTCGGTTTGGGGGGGGTGCCTAGAATGGAATCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224175 211 + 51301725 CACGGAGCGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCCCCCAGGTCCACTGGAGTCCCTCCTGATCCAGACGGTACTGCTGAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGGCTCCCCCTTATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGAGGGGGGTGCCTAGAATGGAATCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940117 211 + 50890351 CGTGGAGCGAATGTGGAACTTGGCCTTGGCTCCAGGCTCCAGTGGGTTCTGTCTCCCCCAGGTCCATGGGAGTCCCTCCTGATCCAGACGGTACTCCTGAGTCTCCAGGGGCCCCTGACACCAGAGGGTCACGGGGCTCCCCCTTATGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGGGGGGGTGCCTAGAATGGAATCAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45489008 186 + 49145316 CATGGATGGATCGTGGAACTTGGCCTTGGCTCCGGGCTCCAGTGCGTTCTG-------------------------TCCTTATCCAGACGGTACTTCACAGTCTCCAGGGGCCCCTGACACCAGCGGGCCATGGGGCTGAACCAGGCTATCACAGAGCCTGGCTCAGCCCAGAGGGTAGGTTTGGGGATGGTGCCTGGAATGGAATCAGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3737365 211 + 145441459 CACAGAAGGGATGAAGAACTTGCCCTTGTTCCCAGGCTCCTGTAGGGTCTGTGTGCTCTGTGTTTTTTGGCTTTTCTCATTATGCAGAAAATATACTTCTGCATCCAGGTTCCCCTGACACCAGATGGTCATTGCTCTTTTGGAGGTGATCACAGATCCTGGTTCAGCCTTGATGGTTGGTTTTTGGAGATTACCTACATAGAAATCAGAG i mm10.chr7 C 0 I 1897 s canFam3.chr1 19721839 211 - 122678785 CATGGATTCAATGGAGTAACTGGCTTTGGTTTTGGAATCCTGGGAGATCTCCATGTAAAAATACCCAGAGACCCTCTCTTTAAACAGATAGTAAGCATCAGCCTGCAGAGACGTCTGACACCAGAGGGTCACAGAGCTCCCCTTGGTGGCCATGAGGCCTGGGTCAGCCCAGATAGAGGGCTTGGGGAGGGTCCCTGGAAAGGAATCAGAT i canFam3.chr1 I 3 C 0 a score=189648.000000 s hg38.chr19_GL949753v2_alt 231793 72 + 796479 GCTGGATCCCAAGAC----------------------------ATCC--CCATCCCTCAGATTCCAGCTCTCAGCCCCAGGACCCTCCAGACGTCCCCATCA s panTro4.chr19 59171648 72 + 63644993 GCTGGATCCCAAGAC----------------------------ATCC--CCATCCCTCAGATTCCAGCTCTCAGCCCCAGGACCCTCCAGACGTCCCCATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4215218 70 - 60714840 GCTGGATCCCAAGAC----------------------------GTCC--CCA-CACTCAGATCCCAGCTCTCAGCCCCAGGACCCCCC-GTCATCCTCATCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102801538 72 - 106955855 GCTGGGTCCCAAGAC----------------------------ATCC--CTACCTTTCGTATCCCAGCTCTCAGCCCCAAAACCCACTAgaccccttcatca i nomLeu3.chr10 C 0 I 14727 s rheMac3.chr19 60111056 72 + 64156825 GCTGGATCCCAAGAC----------------------------ATCC--TCATCCCTCAGATACTAGCTCCCAGCCCCAGGACCCTCCAGATGTCCCCATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138710 72 + 59248254 GCTGGATCCCAAGAC----------------------------ATCC--TCATCCCTCAGATACTAGCTCCCAGCCCCAGGACCCTCCAGATGTCCCCATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224386 72 + 51301725 GCTGGATCCCAAGAC----------------------------ATCC--TCATCCCTCAGATACTAGCTCCCAGCCCCAGGACCCTCCAGATGTCCCCATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940328 72 + 50890351 GCTGGATCCCAAGAC----------------------------ATCC--TCATCCCTCAGATACTAGCTCCCAGCCCCAGGACCCTCCAGATGTCCCCATCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45489194 99 + 49145316 ACT-GATGCCAAGATATGCCAAGGATATCTGAGGGATGCCAAGATCC--TCACCCCTCAGATCCCAGCTCTCAGCCCCGGGACCCTCCAGACATCTCCATCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3739473 69 + 145441459 ACTAGGACTCAGGAC----------------------------AAAC--ACA---CTCAGATTGCAGTCCTTAACCCCATGGCCTTCCTGCCACCCACAGGA i mm10.chr7 I 1897 C 0 s canFam3.chr1 19722050 68 - 122678785 GCATAGTTGCAAGGG----------------------------TGCCATTCACGCCTTATTTTTCCCCCTGCTACCCCAAGGCCCCTC------CCACACTG i canFam3.chr1 C 0 C 0 a score=429715.000000 s hg38.chr19_GL949753v2_alt 231865 166 + 796479 ------GTCAGCCCAGAACAGCTATCTCCACCCCCAGCTGCCCGGGGTTGGGCCCTTGTCCCCAGTGAGAAGAAGGGACC----TGGGACAGCTGGGGACAGACTCACCTGCCTGCACGCAGGTCCTGGGGCCCACACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGG-------------------ATTTGCCC s panTro4.chr19 59171720 166 + 63644993 ------GTCAGCCCAGAACAGCTATCTCCACCCCCAGCTGCCTGGGGTTGGGCCCTTGTCCCCAGTGAGAAGAAGGGAAC----TGGGACAGCTGGGGACAGACTCACCTGCCTGCACGCAGGTCCTGGGGCCCACATTCAGCCCTGGAAGAGAGTTCCCTGTGAGGG-------------------ATTTGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4215288 164 - 60714840 ------GTCA-CCCAGAACTGCTGTCTCCTCCCCCAACTGCCCATGGGTGGCCCCTTGT-CCCAGTGAGGAGGAGGGACC----TGTGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGG-------------------ATTTGCCC i ponAbe2.chr19 C 0 I 28170 s rheMac3.chr19 60111128 165 + 64156825 ------GTCA-CCCAGAACAGCGATCTCCGCCCCCAGCTGCCCGGGGTTGGGTCTTTGTCCCCAGTGAGAAGGAGGGACC----TGGGAGAGCTGGGGACAGACTCACCCGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138782 165 + 59248254 ------GTCA-CCCAGAACAGCGATCTCCGCCCCCAGCTGCCCGGGGTTGGGTCTTTGTCCCCAGTGAGAAGGAGGGACC----TGGGAGAGCTGGGGACAGACTCACCCGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224458 166 + 51301725 ------GTCAGCCCAGAACAGCAGTCTCCACCCCCAGCTGCCCGGGGTTGGGCCCTTGTCCCCAGTGAGAAGGAGGGACC----TGGGAGAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940400 166 + 50890351 ------GTCAGCCCAGAACAGCAATCTCCACTCCCAGCTGCCCGGGGTTGGGTCTTTGTCCCCAGTGAGGAGGAGGGACC----TGGGAGAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45489293 163 + 49145316 ------GTCAGCCCAGAACTGGTGTCTCCTCCCCCAGATGCCCAGGGTTGGGCCCTTGTCCCCAGAG---AGGAGTGGCC----TGGGACAGCTAGGGACAGACTCACCTGACTGCACGCTGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTCCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3739542 163 + 145441459 ------CTCA-CACACAGGTGGTGTTTTCCACCATCACAGCCCAGGCATGGCTCCTGG------ATATGAAGAAAAGAGCATTTCAGGTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGAGGCTCAGAGTCAGTCCTGGAAGAGAGTTCTTTGTAAGAG-------------------ATTTGTCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19722118 164 - 122678785 GTCATCATCA-TCCTTGACG-----CTCTGCCCCTAGCTGTCCTGGGGTT--------------ATGGGCAGAAG---------CAGGATATCTGGGGA-GGACTCACCTGCCTGTGCCTGGTCCCATGGTCCCCAACACAGCCCTGGAAGAGAGTGC-CTGTGAATGGGTCCCTCCACCCACATGTAGTTGCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102801610 14727 - 106955855 I a score=108559.000000 s hg38.chr19_GL949753v2_alt 232031 78 + 796479 CTGGAAGCCCCAGCAGTTCCT---------------------------------CTCCTCCCTCGGAG--------CCTCTGATAGACCAGATTCTCTGATAGACCAGAGCCTCGCTTT s panTro4.chr19 59171886 78 + 63644993 CCGGAAGCCCCAGCAGTTCCT---------------------------------CTCCTCCCTCGGAG--------CCTCTGATAGACCAGATTCTCTGATAGACCAGAGCCTCGCTTT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60111293 78 + 64156825 CCCGAAGCCTCAGGAGTTCCT---------------------------------CTCCTCCCTCAGAG--------CCTCTGATAGACCACATTCTCTGACAGACCAGAGCCTGGCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55138947 78 + 59248254 CCCGAAGCCTCAGGAGTTCCT---------------------------------CTCCTCCCTCAGAG--------CCTCTGATAGACCAGATTCTCTGACAGACCAGAGCCTGGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224624 61 + 51301725 CCCGAAGCCTCAGGAgttcct---------------------------------ctcctccctcagag--------C-----------------CTCTGACAGACCAGAGTCTGGCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940566 78 + 50890351 GCCGAAGCCTCAGGAGTTCCT---------------------------------CTCCTCCCTCAAAG--------CCTCTGATAGACCAGATTTTCTGACAGACCAGAGCCTGGCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45489456 76 + 49145316 --CGAAGCCCCAGCAGTTCCT---------------------------------CTCCTCTCTAGGAG--------CCTCTGATAGGCCAGATTCTCTGATAGACCAGAGCCTGGCTTT i calJac3.chr22 C 0 I 467 s mm10.chr7 3739705 69 + 145441459 --CCAAGGCTGAGCAAGTCTG---------------------------------CAGAAACATCTGAG--------ACCCTG-------AGGTTTCCTTTTGGGTGAGTGCTGGTCTAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19722282 107 - 122678785 ---CAGGCCTGGGTGGGTCCCCGGGCACTGGGGTCACATTTGGGGCTCAGGACACTCCTCCCCCAGAAGTTCTGCTCCCCTGGCAGATC---TTCCCTGAC---CTGGGGTCTCTC--- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I a score=648024.000000 s hg38.chr19_GL949753v2_alt 232109 336 + 796479 -AGAGTGAGCTCCCTCCAAGACGGGGA----------CCTTCCTTCCCCCTCTTC--AAACCTCACCGAGGCAAATCAGGACTGAGAGGGTGAGGGTCATGGCGTCAGCTCCCACTGGACTCAGCTGTGCAGGCGGAT----GAGACCACGGTGC----CTGGCAGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCCCTGTCACAAGACTGTCCCATCGGAAGCCCCACAGGAAGGGGAACTGCCCTCCCCAAGAGCCTGGCTCTCATTTCCCC-AGGGATGG---GGCTGGGGTGAGCTCCAGGCTCTCTGCAGACATTTCAGACAGAAATGGGGTCTCCCTGAGCCC s panTro4.chr19 59171964 336 + 63644993 -AGAGTGAGCTCCCTCCAAGACGGGGA----------CCTTCCTTCCCCCTCTTC--AAACCTCACCGAGGCAAATCAGGACTGAGAGGGTGAGGGTCATGGCATCAGCTCCCACTGGACTCAGCTGTGCAGGCGGAT----GAGACCACGGTGC----CTGGCAGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCCCTGTCACAAGGCTGTCCCATCGGAAGCCCCACAGGAAGGGGAACTGCCCTCCCCAAGAGCCTGGCTCTCATTTCCCC-AGGGATGG---GGCTGGGGTGAGCTCCAGGCTCTCTGCAGACATTTCAGACAGAAATGGGGTCTCCCTGAGCCC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60111371 331 + 64156825 -AGACTGAGTTCCCTCCAAGACTGGGG----------CCTTCCTTTCCCCTCTTC--AAACCTCACCGAGGCACGTCAGGACTGGGAGGGTGAGGGTCATGGCGTCAGCTCCCACTGGACTCAGCTGTGCAGGCGGAT----GAGACCACAGTGC----CTGGCGGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCCCTGTCACAAGGCTGTCCCGTC-----CGCAACAGGAAGGGGAACCGCCCTCCCCAAGAGCCTGGCTCTCATTTCCCC-AGGGATGG---GGCTGGGGTGACCTCCAGGCTCTCCGCAGACATTTCAGACAGAAATGGGGTCGCCCTGAGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55139025 331 + 59248254 -AGACTGAGTTCCCTCCAAGACTGGGG----------CCTTCCTTTCCCCTCTTC--AAACCTCACCGAGGCACATCAGGACTGGGAGGGTGAGGGTCATGGCGTCAGCTCCCACTGGACTCAGCTGTGCAGGCGGAT----GAGACCACAGTGC----CTGGCGGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCCCTGTCACAAGGCTGTCCCGTC-----CGCAACAGGAAGGGGAACCGCCCTCCCCAAGAGCCTGGCTCTCATTTCGCC-AGGGATGG---GGCTGGGGTGACCTCCAGGCTCTCCGCAGACATTTCAGACAGAAATGGGGTCGCCCTGAGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47224685 331 + 51301725 -AGACTGAGTTCCCTCCAAGACTGGGg----------ccttcctttcccctcttc--aAACCTCACCGAGGCACATCAGGACTGGGAGGGTGAGGGTCATGGCGTCAGCTCCCACTGGACTCAGCTGTGCAGGCGGAT----GAGACCACAGTGC----CTGGCGGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCCCTGTCACAAGGCTGTCCCGTC-----CGCAACAGGAAGGGGAACCGCCCTCCCCAAGAGCCTGGCTCTCATTTCCCC-AGGGATGG---GGCTGGGGTGACCTCCAGGCTCTCCGCAGACATTTCAGACAGAAATGGGGTTGCCCTGAGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940644 331 + 50890351 -AGACTGAGTTCCCTCCAAGACTGGGG----------CCTTCCTTTCCCCTCTTC--AAACCTCACCGAGGCACATCAGGACTGGGAGGGTGAGGGTCATGGCGTCAGCTCCCACTGGACTCAGCTGTGCGGGCGGAT----GAGACCACAGTGC----GTGGCGGGACACAAAAACACGCAGAGTGTGGA-CTGG---AGGCTGGGTTCTCGCTGTCACAAGGCTGTCCCGTC-----CGCAACAGGAAGGGGAACCGCCCTCCCCAAGAGCCTGGCTCTCATTTCCCC-AGGGATGG---GGCTGGGGTGACCTCCAGGCTCTCCGCAGACATTTCAGACAGAAATGGGGTCGCCCTGAGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45489999 298 + 49145316 -AGAGTGAGTTCCCTCCAAGACTAGGG----------TCTTCCTT-CCCCTCTTC--AAACCTCACCGAGGCAAATCACGACTGAGAGGGTGATGGTCATGGCA-------------------------------GAT----GAGACCACAGTGC----CTGAGAGGACACAGGAGCACACAGAGTGTGGA-CTGG---AGGCTGTGTTCTCCTTGTCACAAGACTGTCTCACCTGCAGCCCCACAGGACGGGGAACTGCCCTCCCCAG------GGCTCTCATTTCCCC-AGGGATGG---GGCTCGGGTAAGCTCCAGGCTCTCTGCAGACATTTCAGACAGAAACAGGGTCTCCCTAACGCC i calJac3.chr22 I 467 C 0 s mm10.chr7 3739774 333 + 145441459 -AGGCCCTGATCATTTCCAGACCTCAG----------TATTCCCTCCCCCTCTTC--ACATCTCACCAAGACAGAGCAGGGCTGTGAAGGTGCAGGACATGGCATCTCCCCTCAGTGGCTCCAACTGTGCTTGAGGGC----AGAGCTACAGAGCCTTTCTGAAGGGAT-----TGTGTACAGGGTGTGGCTCTGG---AGGCAGGGCAGTCCCCATGACATGGTCATAT-ATCAGCAGCCCCACAGAAAGAGGAACTGCCCTCCTCAGGA-CCATGCTCTGACTTCCTC-AATGGTGT---GACTAGGCCAGGCAGTCGACCCTCTGCCATTAGGTCTTACACAGATGGCGTTT-CCTCAGCCC i mm10.chr7 C 0 C 0 s canFam3.chr1 19722389 340 - 122678785 AGGAACCAGGACCT---AGGGCAGGGAGAAAACAACCCCATCCCTTCTCTCTTCCAGAGATCTTACCCAGGCAAAGAAGGGCAGTGAAGTTCAGGGTTCTGGCGCTGCCTTCCATGGTCCCCAGAGGTGCAGACAGCTTATAAAATCCCCAGAGC----CTG-CAGGATGGACAGATGCGTGGGGTGTGAC-ATGGCCCAGGCC---CTTTTTCAGTCACAGGGCCCTCATGAC--CAGCCTCACAGGAAGGGGAACAACCCACTC--AGGGTCTTGCTCTTCTCTCCCTGAAGGGTGGCCCAACAGCAGCAGGCCTTGGAGCCT-TGCAGAC--------CAGATGTGAGTTTCCCCGGATCCC i canFam3.chr1 C 0 T 22550 e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I a score=43974.000000 s hg38.chr19_GL949753v2_alt 232445 28 + 796479 TAGCCGCTGTCGGCCTGACCTATACTCA s panTro4.chr19 59172300 28 + 63644993 TAGCCGCTGTCGGCCTGACCTATACTCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60111702 27 + 64156825 TAGCCACTGTCTA-GTGACCTACGCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55139356 27 + 59248254 TAGCCACTGTCTA-GTGACCTACGCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47225016 27 + 51301725 TAGCCACTGTCTA-GTGACCTATGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46940975 27 + 50890351 TAGCCACTGTCTA-GTGACCTATGCTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45490297 28 + 49145316 TAGCCACTGCCTGCCTGACCTATACTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3740107 26 + 145441459 --ACCAGTGTCTGCCTCACCTGTGCACA i mm10.chr7 C 0 N 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I a score=1710520.000000 s hg38.chr19_GL949753v2_alt 232473 1058 + 796479 GCTCACCAAGG--------GCTAGGGCAGAGCAACAAAACCC-CTCCGCTGGGAATGAACCTCTAAGTCGTTCCTGCCTCCTCAGTGCCCCTTTGTCCTTGGCCGTCCCTCTGTGCCTCCAACCATGTTCAAGGTTTTCAGAACAATTACTCAGGTTTGTCATCTGATTCATGGGGTGGAGTGGGGAGCTGAATTTTCTTCCTAATTC-----CACCGATTATGTGACCTTGGACAGCAAAGTGGC--TTGCTTGAGCCTTTCTCTTTTGGAACTTGTGGTCATGACCTCAGCTTCTCAGAGTGGATGTGGGGCTCAGTGGTGCCTGGGACATGGGAGGGGGCTTGGCCATGGTGAATTTCCAGACCAGATTAAGACAGGAGTGGTTGGGGTGTGAGAGGATCCTGGCATTGAGCTCCGTAGTAGAGGAGGATGATTGATGCCCCAACTCAAGAGCCCACATCTGCTCCAAATACCAAGAAATGCTCCT-----TATGTTTGAAGTTcccggcacggtggcccacccctgtaatctgagcacctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccagcttggggaacatagtgagaccccgtctctgcatataacaaagaagaaataatcaggtatgtttgtgcacgactgcagtcccaactatttgggacactgaggtgggaagattgcttgagcctgggtggtccaggctgtagtgaggtatgatcatagcactgcactccagcctgggtgagagagcacgaccctgtctcaaaaCatacatatatatatatatatatacacacacacacatacacacatctgaaatatgtagattatacatCCGAAATATGTAGATTATGAAAGTTTTGTGCAGAAAAAGAAATGAAAAG---TTCTTTAATTTGAGAAGGTTGCACATCAAAGAACAAACTTGAAAGCTGACAGCCTGCTTGTGTCTAAGACTGTCCCAGGGTCATTAGGGAGGAAATTTCCACTTCTGTGTGGGACAGAAGAGGAACCCCAGGTCCTCATGGAAAGGGAGGGGGTAGGGGCTCCAGATGAA s panTro4.chr19 59172328 1050 + 63644993 GCTCACCAAGG--------GCTAGGGCAGAGCAACAAAACCC-CTCCACTGGGAATGAACCTCTAAGTCGTTCCTGCCTCCTCAGTGCCCCTTTGTCCTTGGCCGTCCCTCTGTGCCTCCAACCATGTTCAAGGTTTTCAGAACAATTACTCAGGTTTGTCATCTGATTCATGGGGTGGAGCGGGGAGCTGAATTTTCTTCCCAATTC-----CACCGATCATGTGACCTTGGACAGCAAAGTGGC--TTGCTTGAGCCTTTCTCTTTTGGAACTTGTGGTCATGACCTCAGCTTCTCAGAGTGGATGTGGGGCTCAGTGGTGCCTGGGACATGGGATGGGGCTCGGCCATGGTGAATTTCCAGACCAGATTAAGACAGGAGTGGTTGGGGTGTGAGAGGATCCTGGCGTTGAGCTCCGTAGTTGAGGAGGATGATTGATGCCCCAACTCAAGAGCCCACATCTGCTCCAAATACCAAGAAATGCTCCTTATAATATGTTTGAAGTTcccggcacggtggcccacccctgtaatctgagcacctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccagcttggggaacatagtgagaccccgtctctgcatataagaaaaaagaaataatcaggtatgtttgtgcacgactgcagtcccaactatttgggacactgaggtgggaagattgcttgagcctgggtggtccaggctgtagtgaggtatgatcatagcactgcactccagcctgggtgagagagcacgaccctgtctcaaaaCatacatatatatatatatatat------------atatacacatCTGAAATATGTAGATTATACATCCGAAATATGTAGATTATGAAAGTTTTGTGCAGAAAAAGAAATGAAAA----TTTTTTAATTTGAGAAGGTTGCACATCAAAGAACAAACTTGAAAGCTGACAGCCTGCTTGTGTCTAAGACCATCCCAGGGTCATTAGGGAGGAAATTTCCACTTCTGTGTGGGACAGAAGAGGAACCCCAGGTCCTCACTGTCAGGGAGGGGGTAGGGGCTCCAGATGAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60111729 1024 + 64156825 GCTCACCAAGG--------GCTGGGGCAGAGCAGCAAAACCCGCTTCTCCGGGAATGAACCCCTGAATCATTCCTGCCTCCTCAGTGCCCCTTTGTCCTTGGCCGTCCCTCTGTACCTCCAACCACGTTCAAGGTTTTCAGGACAATTACTCAGGTTTGTCATCTgactcagggggtggaggagggagctgaattttattcccacttc-----cactgattatgtgaccttagacaaTAAAGTGGCTTTTGCTTGAGCCTTGTTCATTTGGAGCTTGTGGTCATGACCTCAGCTTCTCAGAGTGGACGTGGGGGTCAGTGGTGCCTGGGACATGGGAGAGGGCTCGGCCATGGTGAATTTCCAGACCAGATTAGGACAGGAGTGGTTGGGGCGTGAGAGGATCCTGGCGTTGAGCTCCGTAGTTGAGGAAGATGTTTGATGCCCCCACTCAAGAGCCCACATCTGCTCCAAATACCAAGAAACGCTCCTTATAATATGTTTGAAGTTcccggcacggtggcccacccctggaatctgagcgcctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccaacctggggaacatagtgagaccccgtgtctgcctataataaaaaagaaataatcaggtgtgtttgtgcacgactgcagtcccagctatttgggagacggaggtgggaagattgcttgagcctgggtggtccaggttgcagtgaggtacgatcacagcactgcactccagcctgggtgagacagcaagaccctgtctcaaaaCATACATACATATATATATA---------------------------------------------ATCTGAAATATGTAGATTATGAAAGTTTTGTGCAGAAAAAGAAATGAAAAGTTTTTTTTTAACTTGAGAAGGTTGCACATCAAAGAACAGAGTTGAAAGCTGACAGCTAGCGTGTGTCTAAGACCATCCTGGGGTCATTAGGGAGGAAACTTCCACTTCTGTGTGGGACAGAGGAGGAACCCCAGGTCCTCACAGTCAGGGAGGGGGTAGGGGCTCCAGATGAA i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55139383 1021 + 59248254 GCTCACCAAGG--------GCTGGGGCAGAGCAGCAAAACCCGCTTCTCCGGGAATGAACCCCTGAATCATTCCTGCCTCCTCAGTGCCCCTTTGTCCTTGGCCGTCCCTCTGTACCTCCAACCACGTTCAAGGTTTTCAGGACAATTACTCAGGTTTGTCATCTGACTCAGGGGGTGGAGGAGGGAGCTGAATTTTATTCCCACTTC-----CACTGATTATGTGACCTTAGACAATAAAGTGGCTTTTGCTTGAGCCTTGTTCATTTGGAGCTTGTGGTCATGACCTCAGCTTCTCAGAGTGGACGTGGGGGTCAGTGGTGCCTGGGACATGGGAGAGGGCTCGGCCATGGTGAATTTCCAGACCAGATTAGGACAGGAGTGGTTGGGGCGTGAGAGGATCCTGGCGTTGAGCTCCGTAGTTGAGGAAGATGTTTGATGCCCCCACTCAAGAGCCCACATCTGCTCCAAATACCAAGAAACGCTCCTTATAATATGTTTGAAGTTcccggcatggtggcccacccctggaatctgagcgcctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccaacctggggaacatagtgagaccccgtgtctgcctataataaaaaagaaataatcaggtgtgtttgtgcacgactgcagtcccagctatttgggagacggaggtgggaagattgcttgagcctgggtggtccaggttgcagtgaggtacgatcacagcactgcactccagcctgggtgagacagcaagaccctgtctcaaaaCATACATACATATATAT------------------------------------------------ATCTGAAATATGTAGATTATGAAAGTTTTGTGCAGAAAAAGAAATGAAAAGTTTTTTTTTAACTTGAGAAGGTTGCACATCAAAGAACAGAGTTGAAAGCTGACAGCTAGCATGTGTCTAAGACCATCCTGGGGTCATTAGGGAGGAAACTTCCACTTCTGTGTGGGACAGAAGAGGAACCCCAGGTCCTCACAGTCAGGGAGGGGGTAGGGGCTCCAGATGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47225043 1014 + 51301725 GCTCACCAAGG--------GCTGGGGCAGAGCAGCAAAACCCGCTTCTCTGGGAATGAACCCCTGAAtccttcctgcctcctcagtGCCCCTTTGTCCTTGGCCGTCCCCCTGTACCTCCAATCACGTTCAAGGTTTTCAGGACAATTACTCAGGTTTGTCATCTGACTcagggggtggaggagggagctGAATTTTATTCCCACTTC-----CACTGATTATGTGACCTTAGACAGTAAAGTGGCTTTTGCTTGAGCCTTGTTTATTTGGAGCTTGTGGTCATGACCTCAGCTTCTCAGAGTGGATGTGGGGGTCAGTGGTGCCTGGGACATGGGAGGGGGCTCGGCCATGGTGAATTTCCAGACCAAATTAGGACAGGAGTGGTTGGGGTGTGAGAGGATCCTGGCGTTGAGCTCCGTAGTTGAGGAGGATGTTTGATGCCCCCACTCAAGGGCCCACATCTGCTCCAAATACCAAGAAACGCTCCTTATAATATGTTTGAAGTTCCCGGCACGGTGGCCCACCCCTGGAATCTGAGcgcctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccaacctggggaacGTAGTGAGACCCCGTGTCTgcctataataaaaaagaaataatcaggtGTGTTTGTGCAcgactgcagtcccagctacttgggagacggaggtgggaagattgcctgagcctgggtgGTCCACGCTGCAGTGAGGTACgatcatagcactgcactccagcctgggtgagacaggaagaccctgtctcaaaacatacatacatatatat------------------------------------------------atctgaaaTGTGTAGATTATGAAAGTTTtgtgcagaaaaagaaatgaaaag-ttttttttaacttgagaAGGTTGCACATCAAAGAACAGAGTTAAAAGCTGACAGCTAGCGTGTGTCTAAGACCATCCCGGGGTCATTAGGGAGGAAATTTCCACTTCTGTGTGGGACAAAAGAGGAACC------CCTCACAGTCAGGGAGGGGGTAGGGGCTCCAGATGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46941002 1012 + 50890351 GCTCACCAAGG--------GCTGGGGCACAGCAGCAAAACCCCCTCCTCCGGGAATGAACCCCTGAGTCGTTCCTGCCTCCTCAGTGCCCCTTTGTCCTTGGCCGTCCCTCTCTACCTCCAACCATGTTCAAGGTTTTCAGAACAATTACTCAGGTTTGTCATCTGACTCAGGGGGTGGAGGAGGGAGCTGAATTTTATT--CACTTC-----CACTGATTACATGATCTTAGACAGTAAAGTGGCTTTTGCTTGAGCCTTGTTTATTTGGAGCTTGTGGTCATGACCTCAGCTTCTCAGAGTGGACGTGGGGGTCAGTGGTGCCTGGGACATGGGAGGGGGATCGGCCATGGTGAATTTCCAGACCAGATTAGGACAGGAGTGGTTGGGGTGTGAGAGGATCCTGGCGTTGAGCTCTGTAGTTGAGGAGGATGTTTGATGCCCCCACTCAAGAGCCCACATCTGCTCCAAATACCAAGAAACGCTCCTTATAATATGTTTGAAGTTcccggcacggtggcccacccctggaatctgagcgcctagggaggctgaggatggaggatcccttgagctcagaagttcaagaccaacctggggaacgtagtgagaccccgtgtctgcctataataaaaaagaaataatcaggtgtgtttgtgcatgactgcagtcccagctatttgggagacggaggtgggaagattgcctgagcctgggtggtccaggctgcagtgaggtatgatcatagcactgcactccagcctgggtgagacagcaggaccctgtctcaaaaCATACATACATATATAT------------------------------------------------ATCTGAAATGTGTAGATTATGAAAGTTTTGTGCAGAAAAAGAAATGAAAAG-TTTTTTTTAACTTGAGAAGGTTGCACATCAAAGAACAGAGTTGAAAGCTAACAGCTAGCGTGTGTCTAAGACCATCCCGGGGTCATTAGGGAGGAAATTTCCACTTTTGTGTGGGACAAAAGAGGAACC------CCTCACAGTCAGGGAGGGGGTAGGGGCTCCAGATGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45490325 1004 + 49145316 GCTCACCAAGGTTGTGTGCATTAGGGCAGAGCAGCAAAACCGCCTCCTCTGGGAATGAGCCTCTGAGTCGTTCCTGCCTCCTCAGTGCCC--GTATCCTTGGCCGTCCCTCTGCACCTCAAACAATGTTCAGGGTTTTCAGAACAATTACTCGGGTCTGTCATCTGATTCAGGGGGTGAAGTGGGgagctgaagttaattcccaattctccttcacttactatgtgacattggacaat-cagtggc--ttccttcagcctttatcttttggagactgtggtcatgacctccacttctcagagtggatgtgggggttagtggtgtctgagacatggaag-gggctcggcCATGGTGAGTTTCCAGACCATATTTAGACAGGAGTAGTT-GGGTGTGAGAGGATCCTGGCATTGAGCCCTGTAGTTGAGAAGGATGATTGATGCACCCACTCAAGAGCCCACATCAGCTCCAAATACCAAGAAATGCTCCTTATAATATGTTTAAAGTTGcaggcatggtggcccacccctgtaatctgagcac---------ctgaggatggaggatcccttgagctcagaagttcaagaccaggctggggaacatggtgagaccacatctctgcatataataaaaaagaaataatcaggtgtggttgtgcatgactgcagtcccaact-tttgggagactgaggtgtgaggatcgcttgagcctgggtggtccaggctgcagtgaggcatgatcacagcactgtactctagcctgggcgagagagtaaga-cctgtctcaaaaCAT------ATATATCT------------------------------------------------ATCTGAATTATGTAGATTATGGAAGTTCTGTGCAG-AAAAGAAATGAAAAG---TTTTTTAGTTTGAGAAGGCTGCACATCAAAGAACAGAGTTGAAAGCTGAAAGGCCGCATGTGCCTAGGACCATCGTCGGGTCATTAGGGAGGAGATTTCTACTTCTGTGTGGGACAGAAGAGGAACCCCAGGTCCTCA--GTCAGGGAGGGGGTAGGGGCTTCAGATGAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I a score=600.000000 s hg38.chr19_GL949753v2_alt 233531 1 + 796479 G s panTro4.chr19 59173378 1 + 63644993 G i panTro4.chr19 C 0 C 0 s chlSab2.chr6 46942014 1 + 50890351 G i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45491329 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I e papAnu2.chr19 47226057 0 + 51301725 C e macFas5.chr19 55140404 0 + 59248254 C e rheMac3.chr19 60112753 5 + 64156825 I a score=422.000000 s hg38.chr19_GL949753v2_alt 233532 1 + 796479 A s panTro4.chr19 59173379 1 + 63644993 A i panTro4.chr19 C 0 C 0 s macFas5.chr19 55140404 1 + 59248254 A i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47226057 1 + 51301725 G i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45491330 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I e chlSab2.chr6 46942015 4 + 50890351 I e rheMac3.chr19 60112753 5 + 64156825 I a score=6545.000000 s hg38.chr19_GL949753v2_alt 233533 42 + 796479 TGAAAAGCTGTGGCCCggcccggcgcggtggctcacgcctat s panTro4.chr19 59173380 42 + 63644993 TGAAAAGCTGTGGCTCggcccggcgcggtggctcatgcctgt i panTro4.chr19 C 0 C 0 s calJac3.chr22 45491331 34 + 49145316 GGAAAAGCCGTGGCTCACCC--------TTGCTCACGTCTGT i calJac3.chr22 C 0 I 74 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I e chlSab2.chr6 46942015 4 + 50890351 I e papAnu2.chr19 47226058 1 + 51301725 I e macFas5.chr19 55140405 1 + 59248254 I e rheMac3.chr19 60112753 5 + 64156825 I a score=25409.000000 s hg38.chr19_GL949753v2_alt 233575 286 + 796479 aatcccagcactttgggaggctgagatgggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaacccgtctctacttaaaaaaaaaaaaatagaaaaaattaagcgggcgtggtggcgggcgcctgtagtcccggctacttgggaggctgaggcaggaaaatggtgtgaacctgggaggcagagcttgcagtgagctgagatcgcgccactgcactctagcctgggggacagagtgagactccgtctcaaaaaaagaaaaaaaaaaaagg s panTro4.chr19 59173422 283 + 63644993 aatcccagcactttgggaggccgagatgggcagatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaacccgtctctactt-aaaaaaaaaaaatagaaaaaattaagtgggcatggtggcgggcgcctgtagtcccggctacttgggaggttgaggcaggagaatggtgtgaacctgggaggcagagcttgcagtgagctgagatcgcgccactgcactctagcctgggggacagagtgagactccgtctcaaaaaa--aaaaaaaaaaaagg i panTro4.chr19 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491365 74 + 49145316 I e nomLeu3.chr10 102801610 14727 - 106955855 I e chlSab2.chr6 46942015 4 + 50890351 I e papAnu2.chr19 47226058 1 + 51301725 I e macFas5.chr19 55140405 1 + 59248254 I e rheMac3.chr19 60112753 5 + 64156825 I a score=3827.000000 s hg38.chr19_GL949753v2_alt 233861 17 + 796479 aaaagaaaAGCTGTGGT s panTro4.chr19 59173705 17 + 63644993 aaaagaaaaGCTGTGGT i panTro4.chr19 C 0 C 0 s calJac3.chr22 45491439 17 + 49145316 AGAGGAAAAGCCGTGGC i calJac3.chr22 I 74 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e nomLeu3.chr10 102801610 14727 - 106955855 I e chlSab2.chr6 46942015 4 + 50890351 I e papAnu2.chr19 47226058 1 + 51301725 I e macFas5.chr19 55140405 1 + 59248254 I e rheMac3.chr19 60112753 5 + 64156825 I a score=3936.000000 s hg38.chr19_GL949753v2_alt 233878 13 + 796479 TCACCCTTGCTCG s panTro4.chr19 59173722 13 + 63644993 TCACCCTTGCTCG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102816337 13 - 106955855 TCCTTCTCCCCTG i nomLeu3.chr10 I 14727 C 0 s calJac3.chr22 45491456 13 + 49145316 TCACCCTTGCTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e chlSab2.chr6 46942015 4 + 50890351 I e papAnu2.chr19 47226058 1 + 51301725 I e macFas5.chr19 55140405 1 + 59248254 I e rheMac3.chr19 60112753 5 + 64156825 I a score=2355.000000 s hg38.chr19_GL949753v2_alt 233891 3 + 796479 TGC s panTro4.chr19 59173735 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102816350 3 - 106955855 TGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55140406 3 + 59248254 TGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47226059 3 + 51301725 TGT i papAnu2.chr19 I 1 C 0 s calJac3.chr22 45491469 3 + 49145316 CGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e chlSab2.chr6 46942015 4 + 50890351 I e rheMac3.chr19 60112753 5 + 64156825 I a score=160209.000000 s hg38.chr19_GL949753v2_alt 233894 91 + 796479 TTGTGGACAGGAGCTGGGATATCTCTGCCCACTGACTGAAGTCCAT--------GATCAGCATGGGGCCACCTCTCCCGTTTTTGTGTTTAAC----------------------------------------------------------AGATTC s panTro4.chr19 59173738 91 + 63644993 TTGTGGACAGGAGCTGGGATATCTCTGCCCACTGACTGAAGTCCAT--------GATCAGCATGGGGCCACCTCTCCTGTTTTTGTGTTTAAC----------------------------------------------------------AGATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102816353 88 - 106955855 TTGTGGAT-GGCACTGGGACATCTCTGCTCATTGACTCAGGTCCAT--------GGTCAGCCCTGAGCCGCCTCCTCCA--TGTGTGTGAAAC----------------------------------------------------------AGATTC i nomLeu3.chr10 C 0 T 8357 s rheMac3.chr19 60112758 148 + 64156825 TTGTGGACAGGAGCTGGGATATCTCCGCCCACTGACTGAAGTCCG---------GATCAGCATGGGGCCGCCTCTCCTGTTTTTGTGTTTAACAGATTCAGCCGCCGGGCGCTGTGGCTCACGCCTGTTCTCTCCTGTTTTTGTGTTTAATAGATTC i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55140409 90 + 59248254 TTGTGGACAGGAGCTGGGATATCTCCACCCACTGACTGAAGTCCG---------GATCAGCATGGGGCCGCCTCTCCTGTTTTTGTGTTTAAC----------------------------------------------------------AGATTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47226062 99 + 51301725 TTGTGGACAGGAGCTGGGATATCTCCGCCCACTGACTGAAGTCCGCGATCAGCAGATCAGCATGGGGCCGCCTCTCCTGTTTTTGTGTTTAAT----------------------------------------------------------AGATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46942019 91 + 50890351 TTGTGGACAGGAGCTGGGATATCTCCGCCCACTGACTGAAGTCCGC--------GATCAGCATGGGGCCGCCTCTCCTGTTTTTGTGTTTAAT----------------------------------------------------------AGATTC i chlSab2.chr6 I 4 C 0 s calJac3.chr22 45491472 85 + 49145316 CTGTGGACAGGAACTGGGATATCTCTGCACACTGAGTGAAGCCCAT--------GGTCAGCACTGGGCC-CCTCTCCTGT-----TGTGTAAC----------------------------------------------------------AGATTC i calJac3.chr22 C 0 I 4066 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I a score=335307.000000 s hg38.chr19_GL949753v2_alt 233985 264 + 796479 CGCCgccgtgcgtggtgcctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccccgtttctactaaaaatacaaaaaaattagctgggcgtggtggtgcatgcctgtaatcccagctacttaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcggtgaggcgagatcaagccattgcactccagcctgg s panTro4.chr19 59173829 264 + 63644993 AGCCgccgtgcgcggtgcctcacacctgtaatcccagcacttcgggaggctgaggcgggcggatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccctgtttctactaaaaatacaaaaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcggtgagacgagatcaagccattgcactccagcctgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60112906 263 + 64156825 AGCCgccgggcgctgtggctcacgcctgtaatcccagcactttgggaggccgaggtggggggatcatctgaggtcgggagttcgagaccagcctgaccaacatggagaaaccctgtctctacgaaaaatacaaaaaaactagccgggcgtgctggcgggcgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcggtgagccgagatcgtgcca-tgtactccagcctgg i rheMac3.chr19 C 0 I 7075 s macFas5.chr19 55140499 263 + 59248254 AGCCgccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtggggggatcatctgaggtcgggagttcgagaccagcctgaccaacatggagaaaccccgtctctacgaaaaatacaaaaaaactagccgggcgtggtggcgggcgcctgtaatcccagctacttgggaggctgagacaggagaattgcttgaacccaggaggcggaggttgcggtgagccgagatcgtgcca-tgtactccagcctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47226161 263 + 51301725 AGccgcagggcgtggtggctcatgcctgtaatcccagcactctgggaggctgaggtgggcggatcatctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccctgtctctacgaaaaatacaaaaaaattagctgggcgtggtggcgagcgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcggtgagccgagatcgtgcca-tgtactccagcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46942110 263 + 50890351 AGTCgcagggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcggatcatctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccctgtctctacgaaaaatacaaaaaaattagctgggcgtggtggcgagcgcctgtcatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccgagatcgtgcca-tgtactccagcctgg i chlSab2.chr6 C 0 I 5306 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T a score=9511.000000 s hg38.chr19_GL949753v2_alt 234249 31 + 796479 gtgacaagagtgaaactccatctcaaaataa s panTro4.chr19 59174093 31 + 63644993 gtgacaagagtgaaactccatctcaaaataa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55140762 31 + 59248254 tcaacaagagctagactctgtctaaaaacaa i macFas5.chr19 C 0 I 3780 s papAnu2.chr19 47226424 29 + 51301725 tcaacaagagctaga--ctgtctaaaaacaa i papAnu2.chr19 C 0 I 5047 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=310922.000000 s hg38.chr19_GL949753v2_alt 234280 3406 + 796479 taataataataataataataaataaataaataaaaTccttgaagtccacccggcgttctattgcactgcagctgacctggcactcaagccacaagatactgtccttcctactcatccctcccctttcttaaggcaaaggagcctcatgccatgaccactgccacaacaggcttacagggagaactgccagtgttctcttaagccctaagggatcttcagtcagcttgtggtgaaggcttcctggcctgctattcatccgtcatgacactgggctctgcccaggcccagggcaggtccagaaatgatctctaagagcaaagtccttgaattgaggacctgagagcctacttggcactctatcccctgttgttgagctggtacctaaggtgcaatacaaagtcccttttactttttcttccacttttctcaccccacagtcaacatggctgggaaggtgctgagtctcacttgaagccagcaagtctcagagtctcacctaaggcccacgacatagtacctgtatattgctgctggttattcagggcctgagagctcttcagttagcaagtgatgaattctgccaggactaaatccttccccacaaggcagcaatttcccttctggcctagggtatgtggaaaaatgttgtccaggagctagcatctgggatggggacctcaggactctgcctgttgccctatcttactgtggctgagtgggtatccaagataaaagacaaagtcctctttattcttccctctcctctcttcaatcagaaggaaggaatcacttttgttgctacaagttgtgctgccttgggtagtgggagggatgaaacaagtacacccttagctacgtttgctgatttctctaaattcactggctccaaactcagcacagcactaggattttcccaggaatcacagtacttgtggcctagactctttcaagcttgtttaagaccccagaccaggcgcagtcactcacacctgtaatctcagcactttgggaggctgaggcgggcagatcatgaggtcaggagtttgagaccagcctggccaatatggccaaatcccatctctactaaaaatacaaaaattaactgggcatggtggcacgtgcctgtagtcccagctacttgggaggctgaggcagtagaatcgcttgaatctgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctgggatgacagagcgagactccatctaaaaccaaaacaaaacaaaaaaacaaacccagagcactttagcctgaggtctcaggtgggacttgctgaatctcaagttccaactgattttctgggcagttcccctttgggtagagctcatcaaatgctttctccatgaacgggcatcagttgcaatcagcccagtgtggctttccagtgtgacagggcagcattgagttcagtcctgccttctcccttccccaagcacacagTCGCTGCTTGGGTGactccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaagaatgctgaaaatataccctaatatctttaatatcttctgacttttagggttatgctgaaaggttcactgttagcctgatgaggtacgtcttttggatgactggcctattctctctagctgccatgaataattttctttcacgttgatcttggagaagttgatgagtatgttgtttgtggatggttttgttgtatagtatctcactggggtgttctgagtttcctaaatgtgaatgttggctctctagtgcggttggggaaatttttattgataatattctcaaatatgtttctcaagttgcttgcttcctttcttactcagggatgccaatgggtcataggttttgtctctttccataatcccataattctcagaggttttgttcattcttttaaattctattttttttatttttgtctgactgcgttgattcacagaagcagtcttttttaattttgtttttatttttgttttctgagatggagtttcgctcttgttgcccaggctggagtgcaatggcacaatcttgactcactgcaacctccacctcatgggttcaagcaattctcctgcctcagcctccctagtaactgggattacaggcatgcaccaccacgtccggcaaattttgtatttttagtagagatggggtttcaccatgttggtcaggttggtctcgaactcctgacctcagttgatccgcccgcctcagcttcccgaagtgctgggattacaggcgtgagtcaccacgcctggccatagaagcagtctttgagctctgagattttcttctcaccttggtctattttgccgttactactttttattatattatgcaatttttgtaatgagtttttcagctctataaaatcagtttctttctttcttaaaatgtctatttcatcttccacctctggtgtcattttactgggttccttatatcccttggattgggtttcaactttcttctgaacctcagtgatcttagtttggcatccagattctgaattctatgtctgccattttagccatttcattaaaaatcacaggatggccacgtaataaatgaaagtagcactgcacctctatcaccccatccttcagtcaggatcagcttggaataaagagggacttctccttgctggaaaaagctgagaaaaagacctagcagcttccatcaacactttggacacctgtagatctcaccattggagattccctttcacagacactaagcacagctgacggagctacccagattccacacagctgcactcacccaggagaaaagactgacactgtgccccactgtccacggccatcacggctctggcactatgccattgtggaatgggatctacttctggatctctgggggacacgtagccgcagcatcctttcactgctgagggattgtcactgctgagccagccttgcctggtggcctgccatccccaggctgagctgttgctctatactaccctgtcgtgccaagctgcctagagccactcgatccacctttcccagtggcagatgcatcctgaccctcagggaccgagctgaagtggaaacggtgccttgggtgttcacaagagtgatggcctgtgcctgcgctagtgtgacacgctgtgtattagggttctctagagggacacaactaatggcgtatatatgtgtgtGTGTGTGTGTGTGTAAAATCGTATCTGGTGtatatatatgtgtgtatatatacacatatcaaaaatatatatgtatatgtgtgtg--tatatatgtgtgtgtatatatgtgtgtgtatatatgtgtgtgtatatgtgtgtgtatatgtgtgtgtatatatgtgtgtgcatatatgtttgtgtg s panTro4.chr19 59174124 3375 + 63644993 taataataataataataataaataaataaataaaaTccttgaagtccacccggcgttctattgcactgcagctgacctggcactcaagccacaagatactgtccttcccactcattcctcccctttctcaaggcaaaggagcctcacgccatgaccactgccacgacaggcttacagggagaactgccagtgttctcttaagccctaagggatcttcagtcagcttgtggtgaaggctgcctggcctgctattcatccgtcatgacactgggctctgcccaggctcagggcaggtccagaaatgatctctaacagcaaagtccttgaattgaggacccgagagcctacttggcactctatcccctgttgttgagctggtacctaaggtgcaatacaaagtcccttttactttttcttccacttttctcaccccacagtcaacatggctgggaaggtgctgagtctcacttgaagccagcaagtctcagagtctcacctaaggcccacgacatagtacctgtatattactgctggttattcagggcccaagagctcttcggttagcaagtgatgaattctgccagaactaaatccttccccacaaggcatcaatttcccttctggcctagggtatgtggaaaaatgttgtccaggagctagcatctgggatggggacctcaggactctgcctgttgccctatcttactgtggctgagtgggtatccaagataaaagacaaagtcctctttattcttccctctcctctcttcaatcagaaggaaggaatcatttttgttgctataagttgtgctgccttgggtagtgggagggatgaaacaagtacacccttagctaccttggctgatttctctaaattcactggctccaaactcagcacagcactaggatttacccaggaatcgcagtacttgtggcctagactctttcaagcttgtttaagaccccagaccaggcgcagtcactcacacctgtaatctcagcactttgggaggctgaggcgggcagatcacgaggtcaggagtttgagaccagcctggccaatatggccaaatcccatctctactaaaaatacaaaaattaactgggcatggtggcacgtgcctgtagtcccagctacttgggaggctgaggcagtagaatcgcttgaatctgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctgggatgacagagcgagactccatctaaaaccaaaacaaaacaaaaaaacaaacccagagcactttagcctgaggtctcaggtgggacttgctgaatctcaagttccaactgattttctgggcagttcccctttgggtagagctcatcaaatgctttctccatgaacgggcatcagttgcaatcagcccagtgtggctttccagtgtgacagggcagcattgagttcagtcctgccttctcccttccccaagcacacagTCGCTGCTTGGGTGactccagcctggttgacagagcgagactctgtctc----aaaaaaaaaaaagaatgctgaaaatataccctaatatctttaatatcttctgacttttagggttatgctgaaaggttcactgttagcctgatgaggtacgtcttttggatgactggcctattctctctagctgccatgaataattttctttcacgttgatcttggagaagttgatgagtatgttgtttgtggatggttttgttgtatagtatctcactggggtgttctgagtttcctaaatgtgaatgttggctctctagtgcggttggggaaatttttattgataatattctcaaatatgtttttcaagttgcttgctttctttcttactcagggatgccaatgggtcataggttttgtctctttccataatcccataattctcagaggttttgttcattcttttaaattcta-tttttttatttttgtctgactgcgttgattcacagaagcagtcttttttaattttgtttttatttttgttttctgagatggagtttcgctcttgttgcccaggctggagtgcaatggcacaatcttgactcactgcaacctccacctcatgggttcaagcaattctcctgcctcagcctccctagtaactgggattacaggtatgcaccaccacgtccggcaaattttgtatttttagtagagatggggtttcaccatgttggtcaggttggtctcgaactcctgacctcagttgatccgcccgcctcagcttcccgaagtgctgggattacaggcgtgagccaccacgcctggccatagaagcagtctttgagctctgagattctcttctcaccttagtctattttgccgttactactttttattatattatgcaatttttgtaatgagtttttcagctctataaaatcagtttatttctttcttaaaatgtctatttcatcttccacctctggtgtcattttactgggttccttagatcccttggattggatttcaactttcttctgaacctcagtgatcttagtttggcatccagattctgaattctatgtctgccattttagccatttcattaaaaatcacaggatggccacgtaataaatgaaagtagcactgcacctctatcaccccatccctcagtcaggatcagcttggaataaagagggacttctccttgctggaaaaagctgagaaaaagatctagcagcttccatcaacactttggacacctatagatctcaccattggagattccctttcacagacactaagcacagctgacggagctacccagattccacacagctgcactcacccaggagaaaagactgacactgtgccccactgtccacggccgtcacggctctggcactatgccattgtggaatgggatctacttctgggtctctgggggacacgtagccgcagcatcctttcactgctgagggattgtcaccgctgagccagccttgcctggtggcctgccatccccaggctgagctgttgctctacactaccctgtcgtgccaagctgcctagagccactcgatccacctttcccagtggcagatgcatcctgaccctcagggaccgagctgaagTGGAAACGGTGCCGTGGGTGTTCACAAGAGTGATGGCCTGTGCCTGCGCTAGTGTGACACGCTGtgtattagggttctctagagggacacaactaacggcgtatatatgtgtgtgtgtgtgtgtgtgtAAAATCGTATCTGGTGTATATATAT--------------ACATATCAAAAATAtatatgtatatgtgtgtgtatatatatgtgtgtgtatatatgtgtgtctatatatgtgtgtgtatatatg--------tgtgtgtgtatatatgtgtgtgtata------tgtgtg i panTro4.chr19 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55140793 3780 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 237686 55 + 796479 tatatatatgtgtgtgtatatgtgtgtgtatatatgtgtgtgtatatatgtttgt e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55140793 3780 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I e panTro4.chr19 59177499 0 + 63644993 C a score=4696.000000 s hg38.chr19_GL949753v2_alt 237741 230 + 796479 gtgtatatatatgtgtgtgtatatatatgtttgtttatatatatgtgtgtatatatatgtgtgtatatatataaaatcatatctggggtatatatatgtgtgtatatatacacatatca-----------------aaaaatatatgtatatatgtgtgtatatatatgtgtatgtatatatgtgtgtgtatatatgtgtgtatatatatgtgtgt--------gtatatatgtttgtgtgtatatatat-----------------------------gtgta s macFas5.chr19 55144573 261 + 59248254 gtgtatatatatgtgtGTGTATGTATATATATGTCTGTGAATATATAT---TAT-TATGTTAGTGTATC-----AGTCA------GGGCATATATAT---TAT-TATATTAAtgtattagggttctccagggggacagaactaatggtgtatatatgtgtgtGTGTATGTGTATATATATGTCTGTGAATATGTAT---TAT-TATATTAGTGTGTTAGTCAGGGCATATATATTATTATATCAATGTAttagggttctccagggggacagaactaatggtgta i macFas5.chr19 I 3780 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e rheMac3.chr19 60113169 7075 + 64156825 I e panTro4.chr19 59177499 0 + 63644993 C a score=45312.000000 s hg38.chr19_GL949753v2_alt 237971 364 + 796479 tgtatatatgtgtgtgtatatatgtgtgtgtatatatatgtgtgtgtatatatatgtttgtgtgtatatatgtgt----gtatatatatgtttc---------------tgtgtatatatatgtgtgtatatatatgtttgtgtgtatatatatataatcgtatctggtgtat----------atatatgtacacatatcaa------------------------aaaatatatgtgtgtgtacatatatgtgtgtatatatatgtgtgt------------gtatatatatgtgtgtacatatatgtttgtgtgtatatat--gtgtgtgtatatatgtgtgtatatatataccctacatatatataccatacatatatatgtatatacaccatatctatatgggtgtttattaagtattaacacacta s panTro4.chr19 59177499 348 + 63644993 tgtatatatgtgtgtatatat------gtgtatatatatgtgt----atatatatgtttctgtgtatatatatgt----gtatatatatgtttc---------------tgtgtatatatatgtgtgtatatatat--------------------aatcatatctggtgtat----------atatatatacacatatcaa------------------------aaaatatatgtgtgtgtacatatatgtgtgtatatatgtgtgtgtatatatgtgtgcgtatatatgtgtgtgtgtacatatgtttgtgtgtatatatatgtgtgtgtatatatgtgtgtatatatataccctacatatatataccatacatatatatgtatataCACCATATCTATATGGGTGTTTATTAAGTATTAACACACTA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55144834 385 + 59248254 --tatatatgtgtGTGTGTGT------GTGtatatatatgtctgtgaatatatattattatattagtgtattggtcaaggcatatatattatattaacagaactaatggtgtatatatatgtgtgtgtgtgtatatatatgtctgtgaatatatattatTACAT-TAGTGTATTAGTCAGGGCATATATATTATTATATTAAtgtattagggttctccagagggacagaactaatg---gtgtatatatatgtgtgtgtgtatatatgtat------------aaaatcatatgtatgtatacatatgtgtgtatatatacacatatgtgtgtat---tatgtgtatatatatac---acacatatgt-------gtatatatatacacacagagtatatata-------ctatta--tatTAATGTAtta i macFas5.chr19 C 0 I 27 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=2920.000000 s hg38.chr19_GL949753v2_alt 238335 31 + 796479 ttatacaaaaattagcctggtgtgtgtgtgt s panTro4.chr19 59177847 31 + 63644993 TTATACAAAAATTAGCCTGGTGTGTGTGTGT i panTro4.chr19 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145219 27 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=31510.000000 s hg38.chr19_GL949753v2_alt 238366 188 + 796479 gtata--catatatatatataaaatcatatatgtgtgtatatatatgcatgtgtgtatatatatgtgtgtgtatatatatgtgtgtatatatacac-atacatatatatgtatatacaccatatatatatgtgtgtgtgtatatatatatatatatata----------CGAGTGTTTATTAAGTATTAACTCACACTATT s panTro4.chr19 59177878 201 + 63644993 GtatatacatatatatatataaaatcgtatatgtgtgtatatatatgcatgtgtgtatatatatgtgtgtgtgtatatatgtgtgtatatatataccatacatatatatgtatatacaccatatatgtgtgtgtgtgtgtatatatatatatatatatatatatataCACGAGTGTTTATTAAGTATTAACTCACACTATT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55145246 172 + 59248254 gtata--tatgtgtatatatag------ATATGTGTGTGCatatat-catatatgtatat-tatatatac---tgtatatatgtgtgtgtatataccatac-catacatatatatacaccatacatatatatgtatatacac-----catatatatata----------tGGATGTTTATTAAGTATTAACTCACACTGTT i macFas5.chr19 I 27 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e calJac3.chr22 45491557 4066 + 49145316 I e nomLeu3.chr10 102816441 8357 - 106955855 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=88719.000000 s hg38.chr19_GL949753v2_alt 238554 162 + 796479 atacaaaaattagcccagtgtggtggtgcacgcctgtagtcccagctactcaggaggctgaggcaggagaatcagttgaacccggcagacggaggttgcagtgagccgagattgcgccactgcactccagcctggtgacggagtgagactccatctcaaaaa s panTro4.chr19 59178079 162 + 63644993 atacaaaaattagcccagtgtggtggtgcacgcccgtagtcccagctactcaggaggctgaggcaggagaatcagttgaacccggcagacggaggttgcagtgagccgagattgcgccactgcactccagcctggtgacggagtgagactccatctcaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102808084 128 - 106955855 atacaaaaattagccaggcatgatggtgcatgcctgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacccaggagacggagggtgcagtgagccgagatcatgccattgcactcc---------------------------------- i nomLeu3.chr10 T 8357 C 0 s macFas5.chr19 55145418 160 + 59248254 TTAC-aaaattagccaggcatggtggggtgcacctgtggtcccagttactcgtgaggctgaggcagaagaatcagtcgaacccgggaagc-gaggttgtagtgagccatgattgtgccactgtactccagcctggcgacagagtgagactccatctcaaaaa i macFas5.chr19 C 0 I 770 s calJac3.chr22 45495623 132 + 49145316 atacaaaaattagctgggcatggtggcgggtgcctgtaatcctagccactccggaggctgaggcaggagaattgcttgaacccgggag---gaggctgcagtgagctgagatcgtgccaatgtactccagcctgg--------------------------- i calJac3.chr22 I 4066 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=88410.000000 s hg38.chr19_GL949753v2_alt 238716 225 + 796479 TtggactctagcctgggcaacaagagcaaaactctgcctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaGACATGATCCAGGCAACATCGATGGGGCATCACCAGGGTCTGTCCTGTCTGT--TGCAGTCCACACTTTGCCCTGCTCATAGCCCCATGAACTTCATGTTCATGTC-TTTTCACACTATAACTTCTTCCAGGTCTTTGCTGGACACATTAAAAAAAAA s panTro4.chr19 59178241 217 + 63644993 ctggactctagcctgggcaacaagagcaaaactctgcctgtctcaaaaaaaaaaaaaaaaaa--------gaCATGATCCAGGCAACATCGATGGGGCATCACCAGGGTCTGTCCTGTCTGT--TGCAGTCCACACTTTGCCCTGCTCATAGCCCCATGAACTTCATGTTCATGTC-TTTTCACACTATAACTTCTTCCAGGTCTTTGCTGGACACATTAAAAAAAAA i panTro4.chr19 C 0 I 1 s nomLeu3.chr10 102808212 211 - 106955855 ---------agcctgggcaacaacagcaaaactctgcctgtctcaagaaaaaaaaaaaaaaa-----aaaGACATGACCTAGGCAACATTGCTGGGGCATCACCAGGGTCTGCCCTGTCTGT--TGTGGTCCACACTTTGCCCTGCTCATAGCCCCATGAACTTCATGTTCATGTC-TTTTCACGCTATAACTTCTTCCAGGTCTTTGCTGGACACATTAAAAAAAAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45495755 195 + 49145316 ----------------gcaacaagagcaaaact----ccatcttggaagaaaaaaaaaagaa--------gagaTGACCCAGACAACACTGATGGGGCATCACCAGGGTCTGCCCTGTCTGTGGTGTGGGCTGCACTTTTTCCTGTTCACAG-TTCATGAACCTCATGTTCATGTCTTTTTCACACTATAACCTCTTCCAGGTCTTTGCTGGACATACTaaaaa---- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4215452 28170 - 60714840 I e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=381739.000000 s hg38.chr19_GL949753v2_alt 238941 552 + 796479 TATATATatataaaatgcttcatgaaatttgttaatatccttgtgcagctgccatgctgatcttctctgtatcattctgattttggtatatgtgctgccaaagcaaCAA-------CACACTGGACACATTTATCTACAAATGAGGCAAACAAAGCATATGGGTGTGAATGGGGAGAAGTACAGTGTTCTCTGTTGTAATTGACCCCGAGGTCATCCTTTATATTTACCAGCTTTGCTGTCTATCACCCTCTCTAGGTTCTGCTTACCTTCTGCCAGAGTTCGCATGAGAAACTCTACTTGTCTCAACTATCGGCCCAATGAAATAAACATAAATTTCAACCTTGAGGCATCTGAGCACCTGATTATTGTGCCTGTTTCAGGCTTTCTTGTGGGAGTTGCCCATtgtgttagtttcttggaggctgatataacaaattatcacaaagtattgaataaaaagaagataaacttattctctcagagttctgcaggccagaaataaaaaatcaaaatgttcatataatttcttctttctagaggctctgaagaagaaacttc s panTro4.chr19 59178459 552 + 63644993 TATATATatatataatgcttcatgaaattttttaatatccttgggcacctgccatgctgatcttctctgtatcattccgattttggtatatgtgctgccaaagcaaCAA-------CACGCTGGACACATTTATCTACAAATGAGGCAAACAAAGCATATGGGTGTGAATGGGGAAAAGTACAGTGTTCTCTGTTGTAATTGACCCCGAGGTCATCCTTTATATTTACCAGCTTTGCTGTCTATCACCCTCTCTAGGTTCTGCTTACCTTCTGCCAGAGTTCGCATGAGAAACTCTACTTGTCTCAACTATCGGCCCAATGAAATAAACATAAATTTCAACCTTGAGGCATCTGAGCACCTGATTATTGTGCCTGTTTCAGGCTTTCTTGTGGGAGTTGCCCATtgtgttagtttcgtggaggctgatataacaaattatcacaaagtattgaataaaaagaagataaacttattctctcagagttctgcaggccagaaataaaaaatcgaaatgttcatataatttcttctttctagaggctctgaagaagaaacttg i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 4243622 546 - 60714840 TATATATatataaaatgcttcatgaaattgtgt-acctccttgtgcaggtgtcatgtgaa---tctctggatcattccaatgttagtatattttccaccagagcaagaa-------cATGCTGGACACATTTATCTAAAAATGAGACAAGCAAAACATATGAATGTGAATGGGAAAAAGTGCAGTGTTCTCTGCTGTAATTGACCCTGAGGTCATCCTGTATATTTACCAGCTTTGTCGTCTAACACCCTTTCTAGATTCTGCTTAAATTTCATCAGAGTTTGCATCAGAAA--CTACTTGTCTAAACTATCAGCTCGATGATTTAAACATGAATTTAAACTTTTAGGGATATGAGCACTTTATTCTCGTGCCCCTCTCAGACTTTCTTGTTGCAATTGCCCATtgcattagcttcctggaagctgtcataacaaattatcacaaatggttggctaaaaacaagataaatttattctctcagagtgctgtaggccgagaaTAAAAAACCAAAATGTTGCTATAGCTTCTTCCTTCCAGGGGCCATGAAGAAGAAACTTC i ponAbe2.chr19 I 28170 C 0 s nomLeu3.chr10 102808423 558 - 106955855 TATATATatataaaatgcttcatgaaatttggtaacatccttgtgcagctgccatgctaatcttctctgtatcattctgattttgctatatgtgctgccaaagcaaCAACATGCTGCACGCTGGACACATTTATCTAAAACTGAGGCAAACAAAGCATATGGATGTGAATGGGGAAAAGTACAGTGTTCTCTGTAATAATTAATCCTGAGGTCATCCTTGATATTTACCAGCTTTGCTGTCTATCACCCTTTCTAGATTCTGCTTCCATTCTGCCAGAGTTTGCATGAGAAACTCTACTTGTCTAAACTATCGGCCCAATGAAATAAACATAAATTTCAACTTTGAGGCATCTGAGCACCTGATTATTATGCCTGTTTCAGGCTTTCTTGTTAGAGTTGCCCATtgtgttagtttcttggaggctgatataacaaattatcacaaagtattgaagaaaaacaagataaacttattggctcagagttctgcaggccagaaatcaaaaatcaaaatgttcatataatttcttctttctaga-gctctgaagaagaaacttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45495950 541 + 49145316 ------tatgcacaatgcttcagggaattttgtaacatacttgtgcagctgccgtgctgatcttctctgtatcattcccattttggcatatgtgctgccaaagcaaCAA-------CGCGCTGGACACATTTACCTAAAAATGAG-CAAACAAAGCCTATGGGTGCGAACGAGGAAAAGTACAGTGTTCTCTGTTGTAATTAATCCTGCAGTTATCCTTGACATCCACCAGCTTTGTTGTCTATCACCCTTGCTAGATTCTGCTTACATTCTGCCAGAGTTCACATAAAAAGCTCTTCTTGTCTAAGCTATCGGCCCAGTGACATAAACATAAATTTCAACTGCGAGGAATCTGAGCACCTGATTATTGTGCCTGTCTCAGGCTTTCTTGCTGCCGTTGTCCACtgtgttcgtttcttggaggttgtcttaacaaattattgcaaagtgttggctaaaagccagataaacttattctctcagagttccgcaggccagaaataaaaaataaaaatgttggtataatttctttcttccagagg----gaagaaaaaacgta i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=5256.000000 s hg38.chr19_GL949753v2_alt 239493 10 + 796479 tgtgcttttt s panTro4.chr19 59179011 10 + 63644993 tgtgcttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4244168 10 - 60714840 TGTGCCTTTT i ponAbe2.chr19 C 0 I 1472 s nomLeu3.chr10 102808981 10 - 106955855 tgtgcttttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45496491 0 + 49145316 C e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=76679.000000 s hg38.chr19_GL949753v2_alt 239503 317 + 796479 ccttctttctttctttcttttttttttttttagatggaatctcgctctgtctcccaggctggactgcagtagcgcgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctccccagtagctgggactacaggtgcccgcccccacacccggataa-tttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatctgcccgcctcggcctcccaaagtgctgggattacaggcatgagccaccacgcccggccacttt s panTro4.chr19 59179021 309 + 63644993 ccttctttctttcttt--------tttcttgaaacggagtcttgctctgtcccccaggctggagtgcagcggcgcgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctccccagtagctgggactacaggtgcctgccaccacacccggataa-tttttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatctgcccgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccacttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102808991 308 - 106955855 ---tctttctttctttc-------ttttttgagatggaatctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaagctccgcctcccatgttcatgccattctcctgcctcagcctccccagtagctgggactacaggtgcccgccaccacgcccggatacttttttttgtatttttagtagagacggggtttcaccgtattagccagaatggtctcgatctcctgacctcgtgatctgcccgcctcagcctcccagagtgctgggattacaggagtgagccatggcgcccggccacttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45496491 0 + 49145316 C e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=332880.000000 s hg38.chr19_GL949753v2_alt 239820 712 + 796479 tgtgcctttttcttagactttggtccttgctggcatttcttggcattccttggtttacagacttctcattctaatctctgcctccatcttcacatggcatcctattcttctctgtgtgtcttcttcatgtcttataaagatgtgagcaatattggatttagatcctgcccgaagccagcatgaccacatcttaactaattatacctgcaaagatcctatttccaaataagttcatattcacagctacgggaggttaggatgtcaacatacctttttggagacacagtgcaaaccccaacCCCAGTCATGGTTACCTCCAGCTATGGAGAATTCATCACTGCCACAGTGAATTATCTAAGCTGCCCAACCACCCTCTCTTCaccaaatcctcctcctcatcgttaaagaaaattacccaggccagtatgatatctttctccttacctgctgatgtactgtaatgaggaaacccaaggaaaaccagctacatcatcattttaggtacagagtaatttttgtgttgttccctggtagtggtttcttaccaggcagatcttctaacccagggtcacctaaaagtgcagtcacaggatgtgcacatctcccaagtgtgtcatctgtaaagttagtgatagatgctgttcattaaactctcactttactcccaagcccatgcattctacctgtcaaaagacataccatgatttattgt s panTro4.chr19 59179330 711 + 63644993 tgtgcctttttcctagactttggtccttgctggcatttcttggcattccttggtttacagacttgtcattctaatctctgcctccatcttcacatggcatcctattcttctctgtgtgtcttcttcatgtcttataaagatgtgagcaatattggatttagatcctgcccgaagccagcatgaccacatctta-ctagttatacctgcaaagatcctatttccaaataagttcatattcacagctacgggaggttaggatgtcaacatacctttttggagacacagtgcaaaccccaacCCCAGTCATGGTTACCTCCAGCTATGGAGAATTCATCACTGCCACAGTGAATTATCTAAGCTGCCCAACCACCCTCTCTTCaccaaatcctcctcctcatcgttaaagaaaattacccaggccagtataatatctttctccttacctgctgatgtactgtaatgaggaaacccaaggaaaaccagctacatcatcattttaggtacagagtaatttttgtgttgttccctggtagtggtttcttaccaggcagatcttctaacccagggtcacctaaaagtgcagtcacaggatgtgcacatctcccaagtgtgtcatctgtaaagttagtgatagatgctgttcattaaactctcactttactcccaagcccatgcattctacctgtcaaaagacataccatgatttattgt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102809299 704 - 106955855 tgtgcctttttcttagattttggtccttgctggcaattcttggcattccttggtttacagacttctcattctaatctctgcctccatcttca-atggcatcctattcttctctgtgtgtcttcttcatgtcttataaagatgtgagcaatattggatttagatcctgcccgaagccagcatgaccacatcttaactaattatacctgcaaatatcctatttccaaataagttcatattcacagctatgggaggttaggatgtcaacatacctttttggagacacagtgcaaaccccaacCCCAGTCATGGTTACCTCCATCTATGGAGACTTCATCAGTGCCACAGCGAATTCTCTGAGCTGCCCAGCTACCCTCTCTTCACTAAATCCTCCTCCTCATCATTAAAGAAAATTACCCAGGCCAGTATAATAT-------CTTACCTGCTGATGTACTGTAATGAGGAAACCCAAGGAAAACCAGCAACATCATCATTTTAGGTACAGAGTAATTTTTGTGTTGTTCCCTGGTAGTGGTTTCTTACCAGGCAGATTTTCTAACCCAAGGTCACCTAAAAGGGCAGTCACAGGACGTGCACATCTCCCAAGTGTGTCATCTGTAAAGTTAGTGATAGATGCTGTTCATTAAACTCTCACTTTATTCCCAAGCCCATGCATTCTACCTATCAAAAGACGTACCATGAtttacttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45496491 708 + 49145316 tgtgtctttttcttagattttg--tcctactggcaattcttagcactgcttggtttacagacttctcattctcacctccgcctgcatcttctcatggcattctattcttccctctgtgtctttttcatgtcttctaaggatgtgagcaataccggatttagatcatgccctaagccagcaggaccacatctcaacaaactacacctgcaaagatcctatttccaagtaagttcatattaacggctacaagaggttaggctctcggcatacctttctggggacacaatacaaaccCCAAGCCCAGGCGCGGTTACCTCCAGTGATGGAGACTTCATCAGTCCCACAGCAAATTATCTAAGCTGCCCAACTACCCTCTCTTCACCCCATCCTCCTCCTCCTCATTTAAGAAAATTACCCAGGACAGTATAATCTCTTTCTCCCTCCCTTCTGATACACTGTGATGAAGAAACCAAAGGAAACACCACAAAACCATCATTTTCGGTAAGGAGGAACTTTTGTGTTGTTCCTTCATAGTGGTTTCTTACTGGGCAGGTCTTCTAACCCAGGGTCACCTAAAAGTTCAGTCACAGGACATGCACATCTCCCAAGTGTGTCATCTGTAATATTAGTGATAGATGCTGTTCATTCATCTCTCACTTTACT--CGAGTCCATGCATTTTATCTATCAAAACACACAGCATCATCTAttgt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e chlSab2.chr6 46942373 5306 + 50890351 I e papAnu2.chr19 47226453 5047 + 51301725 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=160.000000 s hg38.chr19_GL949753v2_alt 240532 3 + 796479 -ttt s panTro4.chr19 59180041 3 + 63644993 -ttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102810003 3 - 106955855 -ttt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47231500 3 + 51301725 -ttc i papAnu2.chr19 I 5047 C 0 s calJac3.chr22 45497199 3 + 49145316 ctt- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e chlSab2.chr6 46942373 5306 + 50890351 I e macFas5.chr19 55145578 770 + 59248254 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=17367.000000 s hg38.chr19_GL949753v2_alt 240535 45 + 796479 attta-ttttttattattttttatttttttgacggagttttgccct s panTro4.chr19 59180044 45 + 63644993 attta-ttttttattattttttatttttttgacggagttttgccct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102810006 34 - 106955855 at----ttttttatt--------tttttttgatggagttttgcctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55146348 44 + 59248254 Attta-tttacttttattttatttttttgagacagagtcttgctc- i macFas5.chr19 I 770 C 0 s papAnu2.chr19 47231503 43 + 51301725 atttacttttattttattttatttttttgagac--agtcttgctc- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45497202 29 + 49145316 -----------------tttttttttttgagatgcagtttcgctct i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e chlSab2.chr6 46942373 5306 + 50890351 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=1700862.000000 s hg38.chr19_GL949753v2_alt 240580 1016 + 796479 tgttgcccaggctggagtgcaatggtgcaatcttggctcactgcaacctccgcctcccgggttcaggcgattctcctgcctcagcctcccaagtagctgggattacaggcgagcagcaccacgcctggctaa---tttttgtatttttaatagagatggcgtttcaccatgttgatcgggctggtctcgaactcctgaactcaggtgatccacctgccctggcctcccaaaatgctgggattacaggcgtgagccaccgcacctggtcCATTTATTGTCTTTATAGCTATATCTG-TATGTATATCATCTACAGCTTTCTGTATGCTTATTTACAGCT------ACTGTAACAGAACCCCCAAACTGCAGAGTCTCATTCACAAACTGTTCAATACATCCAATTTCAAGAGGCCATTTCAATGTTCTTTCAGTCCCAGTAAAACCAAACCACTGCATAGTACA------TATCTCAGGTCATTCCCAGAATATCACGTGGCCATGTTCTCATTCCCTCCACGGATTTTGTGGGCATCTGGATTCCCATTCTGAGAATAAGTCATGGGTTATTTCGTTTAAACAAGTCAGACATTCTGAGTGCTCACAGACCCCTGCGAGGAGCTCCGTCAAACCCATTTTCAGCACAAGCATCCTTCAGACTAAGGAAGGTTTGCTGCCCCCTCGTGGGTGGAATGTGTTCCATGGCATCAAGTTACTACCA---------------------------GGCATCACATCCAGACCtctctgctggtcacaggtgagactttcagctacagtggtggctacgtggtccttggtgagagggagtcactggtgttgggttcatgcatgtcctcctttcttgctccatggctatcccattcacgggcccCTCCTGCTTGCATTGGGCCTGCTGACCCCACAGCTGGATGGATTCCACTGCATCAATTCTGTACTCCACCTGGT--------Gcctcccccagctgtggactgctcttgcttgcttctcagggataggctcatggtagggagtataaatttctcctgtcctcacccagcct s panTro4.chr19 59180089 1016 + 63644993 tgttgcccaggctggagtgcaatggtgcaatctcggctcactgcaacctccgcctcccgggttcaggtgattctcctgcctcagcctcccaagtagctgggattacaggcgagcagcaccacgcccggctaa---tttttgtatttttaatagagatggcgtttcaccatgttgatcgggctggtctcgaactcctgaactcaggtgatccacctgccctggcctcccaaaatgctgggattacaggcatgagccaccgcacccggccCATTTATTGTCTTTATAGCTATATCTG-TATGTATATCATCTACAGCTTTCTGTATGCTTATTTACAGCT------ACTGTAACAGAACCCCCAAACTGCAGAGTCTCATTCACAAACTGTTCAATACATCCAATTTCAAGAGGCCATTTCAATGTTCTTTCAGTCCCAGTAAAACCAAACCACTGCATGGTACA------TATCTCAGGTCATTCCCAGAATATCACGTGGCCATGTTCTCATTCCCTCCACGGATTTTGTGGGCATCTGGATTCCCATTCTGAGAATAAGTCATGGGTTATTTCGTTTAAACAAGTCAGACATTCTGAGTGCTCACAGACCCCTGCAAGGAGCTCCGTCAAACCCATTTTCAGCACAAGCATCCTTCAGACTAAGGAAGGTTTGCTGCCCCCTCGTGGGTGGAATGTGTTCCATGGCATCAAGTTACTACCA---------------------------GGCATCACATCCAGACCtctctgctggtcacaggtgagactttcagctatagtggtggctacgtggtccttggtgagagggagtcactggtgttgggttcatgcatgtcctcctttcttgctccatggctatcccattcatgggcccCTCCTGCTTGCATTGGGCCTGCTGACCCCACAGCTGGATGGACTCCACTGCATCAATTCTGTACTCCACCTGGT--------Gcctcccccagctgtggactgctcttgcttgcttctcagggataggctcatggtggggagtagaaatttctcctgtcctcacccagcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102810040 1015 - 106955855 tgttgcccaggctggagtgcaatggtgcaatcttggctcactgcaacctccgcctcctgggttcaggcgattctcccgcctcagcctcccgagtagctgggattacaggtgagcggcaccatgcccggctaa---tttttgtatttttagtagagacggcatttcaccatgttggtcgggctggtctcgaactcctgaactcaggtgatccacctgccccggcctcccaaaatgctgggattacaggcatgagccaccgcacctggccCATTTATTGTCTTTACAGCTCCATCTA-TAGGTACATCATCTACAGCTTTCTGTCTACCTATTTACATCT------ACTGTAACAGAACCCCCAAACTGCAGAGTCTCATTCACAAACTGTTC-ATACATCCAATTTCAAGAGGCCATTTCAATGTTCTTTCAGTCCCAGTAAAACCAAGCCGCTGCATGGTACA------TATCTCAGGTCATCCCCAGAATGTCACGTGGCCATGTTCTCATTCCCTCCACTGATTTTGTGGGCATCTGGATTCCCATTCTGAGAATAAGTCACGGGCTATTTCGTTTAAACAAGTCAGACATTCTGAGTGCTCACAGACCCCTGCAAGGAGCTCCGTCAAACCCATTTTCAGCACAGGCATCCATCGGACTAAGGAAGGTTTGCTGCCCCCTCGTGGGTGGAATGTGTTCCATGTCATCAAGTTGCTACCA---------------------------GGTATCACAACCAGACCtctctgctggtcgcaggtgagactctcagctacagtggtggctacgtggtccttggtgagagggagtcactgacgttgggtccatgcatgtcctcctttcttgctccatggctatcccattcatgggcccCTCCTGCTTGCATTGGGACCGCTGACCCCACAGCTGGATGGACTCCACGGCATCCATCCTGTACTGCACCTGGT--------Gcctcccccagctgtggactgctcttgcttgcttctcagggataggctcatggtggggagtagaaatttctcctgtcctcacccagcct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55146392 1044 + 59248254 tgttgcccaggctggagtgcaatggctcaatcttggctcattacaacctttgcctcccgggttcaagcgattctcgtgcctcatcctcccgagtagctgggattacaggtgaacagcaccacgcccggctaa---tttttgtatttttagtagagacagcgtttcaccatgtcagtcaggctggtctcgaactcctgaactcaggcgatccacctgcttcggcctcccaaagtgctgggattacaggcgtgggacgccggacctggccCATTTATTGTCTTtatagctatacctattatgtatatcatctacagctttctatatccctgtttacatct------aCGGTAGCAGAACCCCCAAACTGCAGAGTCTCATTCACAAACTGTTCAATACATCCAATTTTAAGAGGCCATTTCAATGTTCTTTCGGTACCAGTAAAATCAAGCCACTGCATGGTACA------TATCTCAGGTCTTCCCCAGAATATCCTGTGGCCATGTTCTCATTCCCTCCACTGATTTTGTGGGCATCTGCATTTCCATTCTGAGAATAAGTCTTGGGCTATTTCGTTTAAACACGTCAGGCATTCGGAGTCCTCACAGACTCCTTCCATGAGCTCCgacaaacccattttcagcacaagcatccactggactaagggaggtttgctgccccctcctgggtcgaatgtgttccatgtcatcaagtcgttaccaggtggattgctggtcccttctatggatggcatcacatccagacctctctactggtcacaggtgagactttcagctacagtggtggctacatggtccttggtgagagggagtcgctggtgttgggtccatgcatgtcctcctttcttgctccatggctatcccattcatgggcccCTCCTGCTTGCACTGGGACTGCTGACCCCACAGCTGGATGGACTCCACCGCATCAATCCTGTACTCCACCTGGT--------Gcctgcccccgctgtggactgctcttgcttgcttctcaggggtaggcacacggtggggagtagaaatttctcccgtcctcatccagcct i macFas5.chr19 C 0 I 1104 s papAnu2.chr19 47231546 1044 + 51301725 tgtcgcccaggctggagtgcaatggctcaatcttggctcattacaacctttgccttccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgaacagcaccacgcccagctaa---tttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtctcaaactcctgaactcaggcgatccacctgcctcagcctgccaaagtgctgggattacaggcgtgggacACCGGACCTGGCCCATTTATTGTCTTTATAGCTATACCTATTATGTATATCATCTACAGCTTTCTATATCCTTATTTACATCT------ACGGTAGCAGAACCCCCAAACTGCGGAGTCTCATTCACAAACTGTTCAATACATCCAATTTTAAGAGGCCATTTCAATGTTCTTTCGGTACCAGTAAAATCAAGCCACTGCATGGTACA------TATCTCAGGTCTTCCCCAGAATATCTTGTGGCCATGTTCTCATTCCCTCCGCTGATTTTGTGGGCATCTGCATTTCCATTCTGAGAATAAGTCTTGGGCTATTTCGTTTAAACAAGTCAGGCATTCGGAGTCCTCACAGACTCCTTCCATGAGCTCCGACAAACCCATTTTCAGCACAAGCATCCACTGGACTAAGGGAGGTTTGCTGCCCCCTCCTGGGTGGAATGTGTTCCACGTCATCAAGTCGTTACCAGGTGGATTGCTGGTCCCTTCAGTGGATGGCATCACATCCAGACCTCTCTACTGGTCACAGGTGAGACTTTCAGCTACAGTGGTGGCTACATGGTCCTTGGTGAGAGGGAGTCGCTGGTGTTGGGTCCATGCGTGTCCTCCTTTCTTGCCCCATGGCTCTCCCAATCATGGGCCCCTCCTGCTTGCACTGGGACTGCTGACCCCACAGCTGGATGGACTCCACTGCAACCATCCTGTGCTCCACCTGGT--------GCCTGCCCCCGCTGTGGACTGCTCTTGCTTGATTCTCAGGGGTAGGCGCACGGTGGGGAGTAGAAATTTCTCCCGTCCTCACCCAGCCT i papAnu2.chr19 C 0 I 1096 s chlSab2.chr6 46947679 1044 + 50890351 tgtcgcccaggctggagtgcagtggctcaatcttggctcattacaacctttgccttacgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggtgaacagcaccatgcccggctaa---tttttgtatttttagtagagacagcgtttcaccatgttggtcaggctggtctcgaactcctgaactcaggcgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagacaccggacctggccCATTTATTGTCTTTATAGCTATACCTATTATGTATATCATCTACAGCTTTCTGTATCCCTGTTTACATCT------GTGGTAGCAGAACCCCCAAACTGCAGTGTCTCATTCACAAACTGTTCAATACATCCAATTTTAAGAGGCCATTTCAATGTTCTTTCAGTACCGGTAAAATCAAACCACTGCATGGTACA------TATCTCAGGTCTTCCCCAGAATATCTTGTGGCCATGTTCTCATTCCCTCCACTGATTTTGTGGGCATCTGGATTTCCATTCTGAGAATAAGTCTTGGGCTATTTCGTTTAAACACATCAGACATTCGGAGTCCTCACAGACTCCTTCCATGAGCTCCgacaaacccattttcagcacaagcatccactggactaagggaggtttgctgccccctcctaggtcgaatgtgttccatgtcatcaagtcgttaccaggtggattgctggtctcttcaatggatggcatcacatccagacctctctgctggtcacaggtgagactttcagctacagtggtggctacatggtccttggtgagagggagtcgctggtgttgggtccatgcatgtcctcctttcttgccccatggctatcccaatcatgggcccCTCCTACTTGCACTAGGACTGCTGACTCCACAGCTGGATGGACTCCACTGCATCTATCCTGTACTCCACCTGGT--------Gcctcccccggctgtggactgctcttgcttgcttctcaggggtaggcgcacggtggggagtaggaatttctcctgtcctcacccagcct i chlSab2.chr6 I 5306 I 1093 s calJac3.chr22 45497231 1042 + 49145316 tgttacccaggctggagtgcaatggtgcgatctcggctcatcgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggattacaggcacgcgccaccatgcccagctaattttttttgtatttttagtagagacggggtttcaccatgttgaccaggatggtctcgatctcttgacctt--gtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccag-ccATATATTGTC---------------------TATATCATCTACAGCTTTCTATATCCCTATTTATCTCTATTAACACCATAACAGAACACCCACATTGCAGAGTCCCAATCACAAACTGTTCAATACATCCAATTTTAAGGGGCCATTTCAATGTTCTTTGAGTCCCAGCAACACCAAACCACTGCATGGTACATAACTCTATCTCAGGTCAG-CCCAGAATATTATGTGACCATGTTCTCATTCCCTTCACCGATTTCATGGGCATCTGGATTCTCATTCTGAGAATACATCATGGGATATTTCGTTTAAACAAGTCAGACGTTCTGAGTCCTCACAGACTCCTACAATGAGCTCAGTCAGACCGGATTTCGGTGCAAgcattcttctgactaatgaagatttgctgccccctcctgcatggaatgtgtttcatgtcatcgagttgccaccatgtggactgctggtctcctcaaagggtggcatcacatccagacctgtctgctagtcacaggtgagactttcggctacagtggtggctacatggtccctcatgagagggagtcactggtgttgcatccaggcatgtcctcctttcttgccctgtggctactgcactcatgggcccctcctgcttgcattgggagtgCTGACCCCACAGCTGGATGGACTCCACTGCATCAACCCTGTACTCCACTTGGTGCCTTAGGGcctcccccagctgtggactgctcttgcttgcttctcagggataggctcatggtggggagtagaaacttctcctgtcctcacctagcct i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=125387.000000 s hg38.chr19_GL949753v2_alt 241596 81 + 796479 cagtcttggacaatttctatatgagtgggccttgagggtggagcttgctcagtgtttgtgtccttcttccccttggcagct s panTro4.chr19 59181105 81 + 63644993 cagtcttggacaatttctatatgagtgggccttgagggtggggcttgctcagtgtttgtgtcctccttccccttggcagct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102811055 81 - 106955855 cagtcttggacaatttctatgtgagtgggcctcaagtgtgggacttggtcagtgtttgtgtcccccttccccttggcagct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55148540 79 + 59248254 cagtcttgggcaatttctatgtctgtgggcctcgggggtggggctctctcagtgtttgtgtcctccttccccttggcag-- i macFas5.chr19 I 1104 C 0 s papAnu2.chr19 47233686 81 + 51301725 CAGTCTTGGGCAATTTCTATGTCTGTGGGCCTCGGGGGTGGGGCTCTCTCAGTGTTCGTGTCCTCCTTCCCCTTGGCAGCT i papAnu2.chr19 I 1096 C 0 s chlSab2.chr6 46949816 81 + 50890351 cagtcttgggcaatttctatgtctgtgggcctcgggggtggggctctctcagtgttcgtgtcctccttccccttggcagct i chlSab2.chr6 I 1093 C 0 s calJac3.chr22 45498273 81 + 49145316 cagttgtgggaaatttctatgtgtgtgggactgaagggcggggctctttcagtgtctctgtcctccttctccttggcagat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e rheMac3.chr19 60113169 7075 + 64156825 I a score=227832.000000 s hg38.chr19_GL949753v2_alt 241677 105 + 796479 ggattgtacttggtagctttggttgacttgggcaggaatttcctgtcccttcccTGACATTTGTATATCTGGGATTATGGTTTCAGGAATTTTCTGCAGTACTCC s panTro4.chr19 59181186 105 + 63644993 ggattgtacttggtagctttggttgacttgggcaggaatttcctgtcccttcccTGACATCTGTATATCTGGGATTATGGTTTCAGGAATTTTCTGCAGTACTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102811136 105 - 106955855 ggattgtacttggtagctttgcttgacttgggCAGGAATTTCCTGTCCCGCACCTGACATTTGTATATCTGGGATTATGGTTTCAGGAATTTTCCGCAGTACTCC i nomLeu3.chr10 C 0 M 352 s rheMac3.chr19 60120244 105 + 64156825 GGATTGTACCTGGTAGCTTTGGTTGATTAGGGCTGGAATTTCCTGGCCCTCCCTTGACATTTGTATATCTGGGATTATGGTTTCAGAAAATTTCCGCAGTACTCC i rheMac3.chr19 I 7075 C 0 s macFas5.chr19 55148619 104 + 59248254 -gattgtacctggtagctttggttgattagggctggaatttcctggccctcccTTGACATTTGTATATCTGGGATTATGGTTTCAGAAAATTTCCGCAGTACTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47233767 105 + 51301725 GGATTGTACCTGGTAGCTTTGGTTGATTAGGGCAGGAATTTCCTGGCCTTCCCCTGATATTTGTATATCTGGGATTATGGTTTCAGAAAATTTCCGCAGTACTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46949897 105 + 50890351 ggattgtacctggtagctttggttgATTAGGGCAGGAATTTCCTGGCCCTCCCCTGACATTTGTATATCTGGGATTATGGTTTCAGAAAATTTCCGCAGTACTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45498354 100 + 49145316 ggattatacttggtagttttggttgatttgggatggaatttcctgtccctcctc-----tttgcagatctatgtttGTGGTTTCAGAAATTTTCTGTAGTACTCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=686959.000000 s hg38.chr19_GL949753v2_alt 241782 439 + 796479 TAGGGATAGAGGGACTTTTAAATCTACCTTCTTATATCCACAATGGGTTTTTACCTGGGGCCTGAGATTGGCTGGTTTTTCTGAACCTCTCTCAATGACTTCAGTCTTTTTCTAC--ACATGGGAGAAGTATCTGGGCAGGGGGTGAGATTTCAGGCCACACACTGTGGAAGGTAATCATGTCTGATCACAAAttttgggtctccaccttacttccaatctatgttgtgaatgcccagttgagacccacggaaaagagctcatgggtgagtgtgaagtgcttctctgtcttaagttcccagagatccttgcctcttggaggccagcaaacactgactcttgaggaattcatgacaatatcatctgattcctccttcccagcttgtatggcagtctcccaccctcatgtgttctgcctttgtagagcctgtcatggcatcct s panTro4.chr19 59181291 439 + 63644993 TAGGGATAGAGGGACTTTTAAATCTACCTTCTTATATCCACAATGGGTTTTTACCTGGGGCCTGAGATTGGCTGGTTTTGCTGAACCTCTCTCAATGACTTAAGTCTTTTTCTAC--ACATGGGAGAAGTATCTGGGCAGGGGGTGAGATTTCAGGCCACACACTGTGGAAGGTAATCATGTCTGATCACAAAttttgggtctccaccttacttccaatctatgttgtgaatgcccagttgagacccacggaaaagagctcatgggtgagtgtgaagtgcttctctgtcttaagttcccagagatccttgcctcttggaggccagcaaacactgactcttgaggaattcatgacaatatcatctgattcctccttcccagcttgtatggcagtctcccaccctcatgtgttctgcctttgtagagcctgtcatggcatcct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60120349 431 + 64156825 TAGTGATA----GACTCTTAAATCTACCTTGTTACGTCCTCAATGGGTTGTTTCCTGTATTGTGAGATTGGCAGGTTTTGCCCATCCTCTCCCAATGACTTAAGTCTTTTTCTAC--ACATGGGAGAAGTATCTACACATGGGA-GAGGTTTCAGGCCACGCACAGTGGAAGGTAATCATGTCTGACCACAAATTTCGGgtctccaccttacttccgatctatgttgtgaatgtccagttgagatccacggaaaagagctcgtggctgaatgtgaagtgctcctccgtcttaagttcccagagatcctcgtctcttggaggccagcaaacaccgactctt---gaattcctgacaatttcatctgatttctctttcccagcttgtatggcagcctcccaccctcgtgtgttctgcctctgtagaggctgtcatggcatcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55148723 431 + 59248254 TAGTGATA----GACTCTTAAATCTACCTTGTTACGTCCTCAATGGGTTGTTTCCTGTATTGTGAGATTGGCAGGTTTTGCCCATCCTCTCCCAATGACTTAAGTCTTTTTCTAC--ACATGGGAGAAGTATCTACACATGGGA-GAGGTTTCAGGCCACGCACAGTGGAAGGTAATCATGTCTGACCACAAATTTCGGgtctccaccttacttccgatctatgttgtgaatgtccagttgagatccacggaaaagagctcgtggctgaatgtgaagtgctcctccgtcttaagttcccagagatcctcgtctcttggaggccagcaaacaccgactctt---gaattcctgacaatttcatctgatttctctttcccagcttgtatggcagcctcccaccctcgtgtgttctgcctctgtagaggctgtcatggcatcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47233872 433 + 51301725 TAGTGATA----GACTCTTAAATCTACCTTATTACGTCCTCAATGGGTTGTTTCCTGTATTGTGAGATTGGCAGGTTTTGCCCATCCTCTCCCAATGACTTAAGTCTTTTTCTACTTAAGTGGGAGAAGTATCTACACATGGGA-GAAGTTTCAGGCCACGCACAGTGGAAGGTAATCATGTCTGACCACAAATTTTGGGTCTCCACCTTACTTCCAATCTATGTGGTGAATGTCCAGTTGAGATCCACGGAAAAGAGCTCGTGGCTGAATGTGAAGTGCTCCTCTGTCTTAAGTTCCCAGAGATCCTCGTCTCTTGGAGGCCAGCAAACACGGACTCTT---GAATTCCTGACAATTTCATCTGATTTCTCTTTCCCAGCTCGTATGGCAGCTTCCCACCCTCTTGTGTTCTGCCTCTATAGAGGCTGTCATGGCATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46950002 431 + 50890351 TAGTGATA----GACTCTTAAATCTACCTTATTACATCCACAATGGGTTGTTTCCTGTATTGTGAGATTGGCAGGTTTTGCCCATCCTCTGCCAATGACTTAAGTCTTTTTCTAC--ACATGGGAGAAGTATCTACACATGGGA-GAAGTTTCAGGCCACGCACAGTGGAAGGTAATCATGTCTGACCACAAAttttgggtctccaccttacttccaatctatgttgtgaatgtccagttgagatccacggaaaagagctcgtggctgaatgtgaagtgctcctctgtcttaagttcccagagatcctcgtctcttggaggccagcaaacatggactctt---gaattcctgacaatttcatctgatttctccttcccagcttgtatggcagcctcccaccctcgtgtgttctgcctctgtagaggctgtcatggcatcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45498454 423 + 49145316 TAGGGACAGAGGGACTCTTAAATCT-CCCTCTTACATCCACAATGGGTTGTTTCCTATGGTGTGTGATTGGCAAGTTTTGCTGAACTTCTCCCAGTGAC--AAGTCTTTTTCTAC--ACATGGGAGAAGTATCTGGGCAGGGGGTGAGATTTCAGACCATGCACAGTGGAAGGTAATCATGTTTGACCGCAAATATTGGGTCTCCGCCTTACTCACAAT-TGTCTTGTGAATGCCCAGTTGAGACCCCTGGAAAAAAGCCTGTGGGTGAGTGTTTAGTGCTCTTCTGTTTTAGGTTCCCAGAAATACTTGTTTCTTGTCGGCCAGCAAACATGAACTCTCCAGGAATTTCTTACAATTTCACCTGATTCCTCCTTCCCAGC------------CTCCCACCCTCGTGCGTTCTGCCTCTGTGAAGCCTGTCATGGCACCCT i calJac3.chr22 C 0 I 798 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e nomLeu3.chr10 102811241 352 - 106955855 M a score=44517.000000 s hg38.chr19_GL949753v2_alt 242221 33 + 796479 actcctccttggaattcaggttactcagttgct s panTro4.chr19 59181730 33 + 63644993 actcctccttggaattcaggttactcagttgct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60120780 33 + 64156825 actcctccttggaattcaggttaccccgttgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55149154 33 + 59248254 actcctccttggaattcaggttaccccgttgct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47234305 33 + 51301725 ACTCCTCCTTGGAATTCAGGTTACTCCGTTGCT i papAnu2.chr19 C 0 I 318 s chlSab2.chr6 46950433 33 + 50890351 actcctccttggaattcaggttactccgttgct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45498877 798 + 49145316 I e nomLeu3.chr10 102811241 352 - 106955855 M a score=97283.000000 s hg38.chr19_GL949753v2_alt 242254 72 + 796479 cccagagctcggatttctgatggtctcaggtgaaatctacattatggagttgatctgagttttactcatggt s panTro4.chr19 59181763 72 + 63644993 cccagagctcggatttctgatggtctcaggtgaaatctacattatggagttgatctgagttttactcatggt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60120813 72 + 64156825 cccagagctcggatttctgatggtctcaggtgaaatatacattatggagttgatctgagttttactcgtggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55149187 72 + 59248254 cccagagctcggatttctgatggtctcaggtgaaatatacattatggagttgatctgagttttactcgtggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47234656 72 + 51301725 cccagagctCGGATTTCTGATGGTCTCAGGTGGAATATACATTATGGAGTTGATCTGAGTTTTACTCGTGGT i papAnu2.chr19 I 318 C 0 s chlSab2.chr6 46950466 72 + 50890351 ccgagagctcggatttctgatggtctcgggtgaaatatacattatggagttgatctgagttttactcatggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45498877 798 + 49145316 I e nomLeu3.chr10 102811241 352 - 106955855 M a score=517573.000000 s hg38.chr19_GL949753v2_alt 242326 328 + 796479 taggattgcagagaagctcttttTTTGGAGTGGGGGAGGG----AGGGGGAGGgatggagtttcgcttttgttgcccaggctggagtgcaatggcgtgt--tcttgg----ctcactacaacctctgcctcctgggttcaagtgattctcctgcctcagcctccccagtagctgggattacgggcatgtgccaccatgcccagctt--tttttttgtatttttagtagagagagggtttcactatgttttccaggctcgtctcaaactcctgaccttaggcaatccacccacctcagcctcccaaaatgctgggattacaggtgtgagccaccgcaccca s panTro4.chr19 59181835 328 + 63644993 taggattgcagagaagctcttttTTTGGAGTGGGGGAGGG----AGGGGGAGGgatggagtttcgcttttgttgcccaggctggagtgcaatggcgtgt--tcttgg----ctcactacaacctctgcctcctgggttcaagtgattctcctgcctcagcctccccagtagctgggattacaggcatgtgccaccatgcccagcta--tttttttgtatttttagtagagagagggtttcactatgttttccaggctcgtctcaaactcctgacctcaggcaatccacccacctcagcctcccaaaatgctgggattacaggtgtgagccaccgcaccca i panTro4.chr19 C 0 I 817 s nomLeu3.chr10 102811593 324 - 106955855 TAGGATTGCAGTG-AGCTCTTTTTTCTTTTTGTTGTGGGG----GAGGGGAGGgatggagtttcactcttgttgcccaggctggagtgcaatggcacaa--tcttcg----ctaactgcaacctctgcctcctggattcaagtgattctcctg-ctcagcct-cctagtagctgggactacaggcatgtgccaccacacccagcta--tttttttgcatttttagtagagacagagtttcattatgtttg-caggctggtctcaaactcctgacctcaggcgatccacctgcctcagcctcccaaagtgctgggattacaggtgtgagtcaccgtgacca i nomLeu3.chr10 M 352 C 0 s rheMac3.chr19 60120885 325 + 64156825 taggatggCCGTGAAGCTCTTTTTTT-------GGGGGGG----ATGGGGAGGCatggagtttcactcttgttgcccaggctagagtaccatgacacgatctcttgg----ctcactgcaacctctgtctcccgggttcaagtgattctcctacctcagcctccctagtagctgggattacaggcatgcgccaccacacccagctatttttttttgtatttttagtagagatggggtttcactatgtttgccaggctggtctcaaacttctgacctcaggcgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55149259 327 + 59248254 taggatggcagtgaagctcttttTTTT-----GGGGGGAG----ATGGGGAGGCatggagtttcactcttgttgcccaggctagagtaccatgacacgatctcttgg----ctcactgcaacctctgtctcccgggttcaagtgattctcttacctcagcctccctagtagctgggattacaggcatgcgccaccacacccagctatttttttttgtatttttagtagagatggggtttcactatgtttgccaggctggtctcaaacttctgacctcaggcgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47234728 331 + 51301725 TAAGATGGCAGTAAagctcttttttt-------gggggggtggcgTGGGGAggcatggagtttcactcttgttgcccaggctagagtacaatgacacgatctcttggctcactcactgcaacctctgtctcctgggttcaagggattctcctacctcagcctccctagtagctgggattacaggcatgcgccaccacacccagcta--tttttttgtatttttagtagagatggggtttcattatgtttgccaggctggtctcaaactgctgacctcaggcgatccaccctcctcagcctcccaaagtgctgggattataggtgtgagccactgtgccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46950538 333 + 50890351 taggatggcagtgaagctcttttTTT-------GGGGGGGTGGGGTGGGGAGGCatggagtttcactcttgttgcccaggctagagtacaatgacatgatctcttggctcactcactgcaacctctgtctcccgggttcaagggattctcctacctcagcctccctagtagctgggattacaagcatgcgccaccacacccagctatttttttttgtatttttagtagagatggggtttcactatgtttggcaggctggtctcaaacttctgacctcaggcgatccaccctcctcagcctcccaaagtgctgggattataggtgtgagccactgtgccca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45498877 798 + 49145316 I a score=6111.000000 s hg38.chr19_GL949753v2_alt 242654 3 + 796479 gcT s panTro4.chr19 59182980 3 + 63644993 GCT i panTro4.chr19 I 817 C 0 s nomLeu3.chr10 102811917 3 - 106955855 gcT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60121210 3 + 64156825 gcT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55149586 3 + 59248254 gcT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235059 3 + 51301725 gct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46950871 3 + 50890351 gcT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45498877 798 + 49145316 I a score=595402.000000 s hg38.chr19_GL949753v2_alt 242657 261 + 796479 AGTGAAACTCTTTCCAGCTCCCCAAACCCTGGGCAGAAGCCGGGATATGAATTATTTATTTACTTACTGAGTTAtgtgacataactcacaccatatgaaatgcacca-ttttttagtgtacaaataaatggattttagtgtcttcactatgctgtgcaatcaccatccctacctcatcccacagcatttccatcacctcagaaagaaccc-ccaagtagtcagtcctagttcttcccttccctcagccttaagaaatcactag s panTro4.chr19 59182983 261 + 63644993 AGTGAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCGGGATATAAATTATTTATTTACTTACTTAGTTAtgtgacataactcacaccatatgaaatgcacca-ttttttagtgtacaaataaatggattttagtgtcttcactatgctgtgcaatcaccatccctacctcatcccacagcatttccattacctcagaaagaaccc-ctaagtagtcagtgctaattcttcccttccctcagccttaagaaatcactag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102811920 262 - 106955855 AGTGAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCTGGGTATAAATTATTTATTTACTTACTTAGTTAtgtgacataactcacgccgtatgaaatgcacca-tattttagtgtacgaataaatggattttagtgccttcactgtgccgtgcaatcactgtccctacctcatcccacagcattttcatcacctcagaaagaacccgctaagtagtcagtcctaattcttcccttctctcagccttaataaatcactag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60121213 259 + 64156825 AATGAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCTGGATATACATCATTTATTTATTTACTTAGTTAtgtgacataactcacaccatatgaaatgcacca-ttttttagtgtacaaataaatggattttagtgtcttcactatgctgtgcaatcaccatccctacctcatcccacagcatttccatcacttcagaaagaacctcttaagtactcagtcctaattctccccttccctcagcctt---aaatcactag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55149589 259 + 59248254 AATGAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCTGGATATACATCATTTATTTATTTACTTAGTTAtgtgacataactcacaccatatgaaatgcacca-ttttttagtgtacaaataaatggattttagtgtcttcactatgctgtgcaatcaccatccctacctcatcccacagcatttccatcacctcagaaagaacctcttaagtactcaatcctaattctccccttccctcagcctt---aaatcactag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235062 259 + 51301725 agtgAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCTggatatacattatttatttatttacttagttaTATGACATAACTCACACCATATGAAATGCACCA-TTTCTTAGTGTACAGATAAATGGATTTTAGTGTCTTCACTATGCTGTGCAATCACCATCCCTACCTCATCCCACAGCATTTCCATCACCTCAGAAAGAACCTCTTAAGTACTCAGTCCTAATTCTCCCCTTCCCTCAGCCTT---AAATcactag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46950874 259 + 50890351 AGTGAAACTCTTTCCAGCTTCCCAAACCCTGGGCAGAAGCCTGGATATACGttatttatttatttacttagttatgtgacgtaactcacaccatatgaaatgcacca-ctttttagtgtacaaataaatggattttagtgtcttcactatactgtgcaatcaccatccctacctcatcccacagcatttccatcacctcagaaagaacctcctaagtactcagtcctaattctccccttccctcagcctt---aaatcactag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45499675 262 + 49145316 AGTGAAACTCTTTGCAGCTTTCCAAACCCTGGGCAGAAACCtaaatataaattatttatttatttaCTTGGTTAtgtgatgtaactcacaccatatgaaattcaccatttttttactgtacaaataaacggtttttagtatattcactatgctgtgcaatcaccatccctaccccattccacagcatttccatcacctcagaaagaaccccctatttagtcagtcctaattcccctcttc-ctcagccttaagaaatcactaa i calJac3.chr22 I 798 I 742 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=372677.000000 s hg38.chr19_GL949753v2_alt 242918 166 + 796479 tctactctcagtttctatggctttgtctattctggatatttcatgtgcataaaatcacaccaaatacacgtccttttgtagctgTTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTTCCAAAGACAAAATTATAATGTGGCCTGACAGAAGAAGTAC s panTro4.chr19 59183244 166 + 63644993 tctactttcagtttctatggctttgtctattctggatatttcatgtgcataaaatcacaccaaatatacgtccttttgtagctATTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTTCCAAAGACAAAATTGTAATGTGGCCTGACAGAAGCAGCAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102812182 166 - 106955855 tctactttctgtttctatggccttgtctattctggacatttcatatgcatgaaatcacaccaaatatacgtccttttgtagctgTTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTTCCAAAGACAAAATTATAATGTGGCCTGACAGAAGAAGCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60121472 157 + 64156825 tctactttctgtttctatggctttgtct---------atttcatatgaatgaaatcacaccaaatatacatccttttgtagctgTTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTTCCAAAGACAAAATTATAATGTGGCCTGACAGAagaagcat i rheMac3.chr19 C 0 I 182 s macFas5.chr19 55149848 166 + 59248254 actactttctgtttctatggctttgtctattctggacatttcatatgaatgaaatcacaccaaatatacatccttttgtagctgTTGATGGAAAAGAAGCGGTTACCATGAAGGAACTGAAGTTTTCCAAAGACAAAATTATAATGTGGCCTGACAGAAGAAGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235321 166 + 51301725 tctactttctgtttctatggctttatctattctggacatttcatatgaatgaaatCACACCAAATATACACCCTTTTGTAGCTGTTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTtccaaagacaaaattataatgtGGCCTGACAGAAGCAGCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46951133 166 + 50890351 tctactttctgtttctatggctttgtctattctggacatttcatatgaatgaaatcacaccaaatatacatccttttgtagctgTTGATGGAAAAGAAGTGGTTACCATGAAGGAACTGAAGTTTTCCAAAGATAAAATTATAATGTGGCCTGATAGAAGAAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45500679 166 + 49145316 tctactttctgtttctattgctttgtctatttgggacattttgtatacattaaatcacaccaaatatatgcccttttacgactgTTGATGGAAAAGAAATGTTTACCATAAGGGAATTGGAGTTTTCCAAAAATAAAATTCTTATGAGGCCTGAGAAAAGAAGCAT i calJac3.chr22 I 742 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=970151.000000 s hg38.chr19_GL949753v2_alt 243084 430 + 796479 AGAAATTGATAACAAAAACAAATCCATCACAACTTATCATGAATCTGGTCATGCCATTATTGCATATTACACAAAAGATGAAATGTCTATCAACAAAGCTACAATCATGCCACAGGGGCCAACATTTGGACCTGTGTCCCCATTACCTGGTGATGACAGATGGAATGAAACCAGAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCAGAGGAGCTTATATTTGGAATTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGCCACTAAAATGGCAAAGCAGATGGTTATCAAATTTGGAATTAGCGAAAAGCTTGGAGTTATGACCTACAGTGACACAGGGAAACTAAGTCCAGAAACTCAATCTGCTATTGAACATGAAATAAGAACCATTCTAAGGGACTCATAT s panTro4.chr19 59183410 430 + 63644993 AGAAATTGATAACAAAAACAAATCCATCACAACTTATCATGAATCTGGTCATGCCATTATGGCATATTACACAAAAGATGAAACGTCTATCAACAAAGCTACAATCATGCCACAGGGGCCAACATTTGGACCTGTGTCCCCATTACCTGATGATGACAGATGGAATGAAACCAGAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCAGAGGAGCTTATATTTGGAACTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGCCACTAAAATGGCAAAGCAGATGGTTATCAAATTTGGAATTAGCGAAAAGCTTGGAGTTATGACCTACAGTGATACAGGGAAACTAAGTCCAGAAACTCAATCTGCTATTGAACATGAAATAAGAACCATTCTAAGGGACTCATAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102812348 421 - 106955855 AGAAATTGATAA-AAAAACAAATCCATCACAACGTGTCATGAATCTGGTCATGCCATTATTGCATATTACATGAAAGATGAAATGCCTATCAACAAAGCTACAATCATGCCACAGGGGCCAACATTTCGACATGTGTCCCCGTTACCTGGTGATGACAGATGGAATGAGACTGGA--------GCTTGCACAAATGGACGTTAGTATGGGAGCAAGAGTGGCAGAGGAGCTTATATTTGGAACTGACCATATAACAACGGGTGCTTCCAGTGATTTTGCTAATGCCACTAAAATGGCAAAGCAGATGGTTATCAAATTTGGAATTAGTGAAAAGCTTGGAGTTATGACCTACAGTGATACAGGGAAACTAAGTCCAGAAACTCAATCTGCCATTGAACATGAAATAAGAACCCTTCTAAGGGACTCATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60121811 428 + 64156825 AGAAATTGATAACAAAAGCAAATCCATCGCAACGTATCATGAATCTGGTCATGCCATTATTGCATATTACACAAAAGATGCAATGTCTATCAACAAAGCTACAATCATGCCACAAGGGCCAATATTTGGACATGTGTCCCTGTTACCTGGTGATGACAGATGGAATGAAAC--AAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCAGGGGAGCTTATATTTGGAACTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGTCACTAAAATAGCAAAGCAGATCGTTATCAAATTTGGAATTAGTGGAAATCTTGGAGTTATGACTTACAGTGATACAGGGAGACTAAGTCCAGAAACTCAATCTGCCATTGAACATGAGATAAGAACCCTTCTAAGGGACTCATAT i rheMac3.chr19 I 182 C 0 s macFas5.chr19 55150014 428 + 59248254 AGAAATTGATAACAAAAGCAAATCCATCGCAACGTACCATGAATCTGGTCATGCCATTATTGCATATTACACAAAAGATGCAATGTCTATCAACAAAGCTACAATCATGCCACAAGGGCCAATATTTGGACATGTGTCCCTGTTACCTGGTGATGACAGATGGAATGAAAC--AAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCCGGGGAGCTTATATTTGGAACTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGTCACTAAAATAGCAAAGCAGATCGTTATAAAATTTGGAATTAGTGAAAATCTTGGAGTTATGACTTACAGTGATACAGGGAGACTAAGTCCAGAAACTCAATCTGCCATTGAACATGAGATAAGAACCCTTCTAAGGGACTCATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235487 428 + 51301725 AGAAATTGATAACAAAAGCAAATCCATCGCAACGTATCATGAATCTGGTCATGCCATTATTGCATATTACACAAAAGATGCAATGTCTATCAACAAAGCTACAATCATGCCACAAGGGCCAATATCTGGACATGTGTCCCTGTTACCTGGGGATGACAGATGGAATGAAAC--AAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCCGGGGAGCTTATATTTGGAACTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGTCACTAAAATAGCAAAGCAGATAGTTATCAAATTTGGAATTAGTGGAAATCTTGGAGTTATGACTTACAGTGATACAGGGAGACTAAGTCCAGAAACTCAATCTGCCATTGAACATGAAATAAGAGCCCTTCTAAGGGACTTATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46951299 428 + 50890351 AGAAATTGATAACAAAAGCAAATCCATCACAACGTATCATGAATCTGGTCATGCCATTATTGCATATTACACAAAAGATGCAATGTCTATCAACAAAGCTACAATCATGCCACAAGGGCCAATATTTGGACATGTGTCCCTGTTACCTGGTGATGACAGATGGAATGAAAC--AAGCCCAGCTGCTTGCACAAATGGACATTAGTATGGGAGCAAGAGTGGCAGGGGAGCTTTTATTTGGAACTGACCATATTACAACAGGTGCTTCCAGTGATTTTGCTAATGTCACTAAAATAGCAAAGCAGATAGTTATCAAATTTGGAATTAGTGAAAATCTTGGAGTTATGACTTACAGTGATATAGGGAAACTAAGTCCAGAAACTCAATCTGCCATCGAACATGAAATAAGAACCCTTCTAAGGGACTCATAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45500845 414 + 49145316 AAAAATTCGTAACAAAAACAAATCCATCACAGTGTATCATGAATC------TGCCATTATTGTATATTACACAAAGGATGAAACGTCTGTCCACAAAGCTACAATCATGCCACAAGGGCTGACACTTGGACATGTCTTCCCGTTACCCAGCG-TGACAGACGAAATGGAACTGGAGTCCAGCTGCTTGCACAAATGGATGTCAGTAAGGGGGCGAGAGTGGCAGAGGAGCTTATATTTCAAACCTACCATGTTACAACTGGTACTTCTAGTGATTTTGATAATGCCACTAAAATAGCAAGGTGGATAGTTACCAAATTTGGAGTTAGTGAAAAGTTTGGAGTTATGACCTACAGTGATACAGAGAAACTAAGTCCAGAAACTCAATCTGCCATTGAACAAGAAATAAGAACCCTT---------TTATAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=3191.000000 s hg38.chr19_GL949753v2_alt 243514 15 + 796479 AAATGAGCAAAACTT s panTro4.chr19 59183840 15 + 63644993 AAATGAGCAAAACTT i panTro4.chr19 C 0 C 0 s calJac3.chr22 45501259 15 + 49145316 GAACAAGTAAAACTT i calJac3.chr22 C 0 I 2 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e nomLeu3.chr10 102812769 0 - 106955855 C e chlSab2.chr6 46951727 0 + 50890351 C e papAnu2.chr19 47235915 0 + 51301725 C e macFas5.chr19 55150442 0 + 59248254 C e rheMac3.chr19 60122239 0 + 64156825 C a score=33774.000000 s hg38.chr19_GL949753v2_alt 243529 377 + 796479 ATTCAAaattcaaataattgtatgacatggttataacaaaacaccatcctaccccatccatagtatttatttagatgaacaaattttctcagtcctgtatctatacaaatgaaaactagatatagtattgacgtttagctctgtttcagtctaggaataagtaatatttaccagtggacatgtgaacaattAATAACCATAATCAAGAAGTATTTTTAAAACATTTAGAATCTTAAATTTATATAGTAGAGATGGATAGGGTGATCCATGAAAGATGTTTAATTATATAATTATTACATTTCGCTAAAAACTTGTTGGTGATGTTGAATGGAAAATCAAGTCAAAAATGAAGAAGAATGATGCAAACCTTAAAAAAA s panTro4.chr19 59183855 377 + 63644993 ATTCAAaattcaaataattgtatgacacggttataacaaaacaccatcctaccctatccatagtatttatttagaagaacaaattttctcagtcctgtatctatacaaatgaaaactagatatagtattgatgtttagctctgtttcagtctaggaataagtaatatttaccaacggacatgtgaacAGTTAATAACCATAATCAAGAAGTATTTTTAAAACATTTAGAATCTTAAATTTATATAGTAGAGATGGATAGGGTGATCCATGAAAGATGTTTAATTATATAATTATTACATTTCGCTAAAAATTTGTTGGTGATGTTGAATGGAAAATCAAGTGAAAAATAAAGAAGAATGATGCAAACCTTAAAAAAA i panTro4.chr19 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45501274 2 + 49145316 I e nomLeu3.chr10 102812769 0 - 106955855 C e chlSab2.chr6 46951727 0 + 50890351 C e papAnu2.chr19 47235915 0 + 51301725 C e macFas5.chr19 55150442 0 + 59248254 C e rheMac3.chr19 60122239 0 + 64156825 C a score=23655.000000 s hg38.chr19_GL949753v2_alt 243906 15 + 796479 AAATGAGCAAAACTT s panTro4.chr19 59184232 14 + 63644993 AA-TGAGCAAAACGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102812769 15 - 106955855 AAATGAGCAAAACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60122239 15 + 64156825 AAATGAGCGAAACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55150442 15 + 59248254 AAATGAGCGAAACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235915 15 + 51301725 AAATGAGCGAAACTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46951727 15 + 50890351 AAATGAGCGAAACTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45501274 2 + 49145316 I a score=737425.000000 s hg38.chr19_GL949753v2_alt 243921 320 + 796479 ATCTTGAAAAGTCATGCAGAGGAGCATAAGAATCTAGCAGAAGCTTTATTGACCTATGAGACTTTAGGTGCCAAAGAGATTCAAATTGTTCTTGAGGGGAAGAAGTTGGAAGTGAGATGAGAACTCTCTTGATGTGGATGCTTTGCTGGTTTTATTGCAAGAATATAAGTAGCATTGCAGTAGTCTCC-TTTTGCAATGCTTTCTCCTCATTATTGACGTTGTGTAATTTAAGGGTGTGAAACATTTTGTCAACATTTTGTCACGTTTACCCAATTTTGGTTATTCTCATTATGACACCCATTGCAAATCAGCATCCCATG s panTro4.chr19 59184246 320 + 63644993 ATCTTGAAAAGTCATGCAGAGGAGCATAAGAATCTAGCAGAAGCTTTATTGACCTATGAGACTTTAGGTGCCAACGAGATTCAAATTGTTCTTGAGGGGAAAAAGCTGGAAGTGAGATGAGAACTCTCTTGATGTGGATGCTTTGCTGGTTTTATTGCAAGAATGTAAGTAGCATTGCAGTAGTCTCC-TTTTGCAATGCTTTCTCCTCATTACTGACGTTGTGTAATTTAAGGGTGTGAAACATTTTGTCAATATTTTGTCACATTTACCCAATTTTGGTTATTCTCATTATGACACCCATTGCAAATCAGCATCCCGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102812784 320 - 106955855 ATCTTGAAAAGTCATGCAGAGGAGCATAAGAATCTAGCAGAAGCTTTATTGACCTGTGAGACCTTGGGTGCCAAAGAGATTCAAATTGTTCTTGAGGGGAAAAAGTTGGAAGTGAGATGAGAACTCTCTTGATATGAATGCTTTGCCGGTTTCACTGCGGGAATATAAGTAGCATTGCAGTAGTCTCC-TTTTGCAATGCTTTCTCCTCATTCTTGACGTGGTGTAATCTAAGGGTGTGAAACATTTTGTCAATCTTTTGTCACATTTACCCAATTTTGGTTATTCTCATTATGACACCTATTGCAAATCAGCATCCCATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60122254 321 + 64156825 ATCTTGAAAACTCATGCAGGGGAGCATAAGAATCTAGCAGAAGCTTTATTGACCTGTGAGACTTTGGGTGCCAAAGAGATTCAAATTGTTTTTGAGGGGAAAAAGTTGGAAGTGAGAGGAGAACTCTCTTGATATGGATGCTTTACCGGTTTTATTGCAAGAATGTAAGTAGCATTGCAGTAGTCTCCTTTTTGCAATGCTTTCTCCTCATTCTCGACGTGATGTAATTTAAGGGTGTGAAACATTTTGTCAATCTTTTGTCACATTTACTCAATTTTGGTTATTCCCATCGTGACTCCTATTGCAAATCAGCATCCTGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55150457 321 + 59248254 ATCTTGAAAACTCATGCAGGGGAGCATAAGAATCTAGCAGAAGCTTTATTGACCTGTGAGACTTTGGGTGCCAAAGAGATTCAAATTGTTTTTGAGGGGAAAAAGTTGGAAGTGAGAGGAGAACTCTCTTGATATGGATGCTTTACCGGTTTTATTGCAAGAATGTAAGTAGCATTGCAGTAGTCTCCTTTTTGCAACGCTTTCTCCTCATTCTCGACGTGATGTAATTTAAGGGTGTGAAACATTTTGTCAATCTTTTGTCACATTTACTCAATTTTGGTTATTCCCATCGTGACTCCTATTGCAAATCAGCATCCTGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47235930 321 + 51301725 ATCTTGAAAACTCATGCAGAGGAACATAAGAATCTAGCAGAACCTTTATTGACCTGTGAGACTTTGGGTGCCAAAGAGATTCAAATTGTTTTTGAGGGGAAAAAGTTGGAAGTGAGAGGAGAACTCTCTTGATATGGATGCTTTACCGGTTTTATTGCAAGAATGTAAGTAGCATTGCAGTAGTCTCCTTTTTGCAATGTTTTCTCCTCATTCTCGACGTGGTGTAATTTAAGGGTGTGAAACATTTTGTCAATCTTTTGTCACATTTACTCAATTTTCGTTATTCCCATCGTGACTCCTATTGCAAATCAGCATCCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46951742 321 + 50890351 ATCTTGAAAACTCAGGCAGAGGAGCATAAGAATCTAGCAGAACCTTTATTGACCTGTGAGACTTTGGGTGCCAAAGAGATTCAAATTGTTTTTGAGGGGAAAAAGCTGGAAGTGAGAGGAGAACTCTCTTGATATGGATGCTTTGCCGGTTTTATTGCAAGAATGTAAGTAGCATTGCAGTAGTCTCCTTTTTGCAATGCTTTCTCCTCATTCTCGACGTGATGTAATTTAAGGGTGTGAAACATTTTGTCAATCTTTTGTCACATTTACTCAATTTTGGTTATTCCCATCGTGACTCCTATTGCAAATCAGCGTCCCGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45501276 315 + 49145316 ATCTTGAAAAGTCATGCAAAGGAGAATAAAAATCCACCAGAAGTTTTATTGACCTATGAGACTTTGGATGCCA--GACATTCAAATTGTTCCTGAGGGGCAAATGTTGGAAGTGAGATGAGAACTCTCTTGATATGGATGCTTTGCTGGTTTTATTGCAAGAATATAAGTAGCATTGCAGTAGCC----TTTTGCAATGCTTTCTCCTCATTCTTGACATAGTATAATTTAAGGGTGTGAAACAGTTTGTCAATCTTTTGTCACATTTACCCAGTTTTGGTTACTCTCATTATGACACCTATTGCAAGTTAGCGTCACATG i calJac3.chr22 I 2 I 312 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=24795.000000 s hg38.chr19_GL949753v2_alt 244241 20 + 796479 GCAAATATATTTT----TAAAACT s panTro4.chr19 59184566 20 + 63644993 GCaaatatatttt----taaaaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813104 18 - 106955855 GCAAATATA--TT----AAAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60122575 21 + 64156825 GCaaatata--tt-aaaaaaaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55150778 21 + 59248254 GCAAATATA--TT-AAAAAAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47236251 22 + 51301725 gcaaataga--ttaaaaaaaaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46952063 22 + 50890351 GCAAATATA--TTTAAAAAAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45501903 20 + 49145316 GCAAACATATTTT----TAAAAAT i calJac3.chr22 I 312 I 4476 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=244189.000000 s hg38.chr19_GL949753v2_alt 244261 105 + 796479 AAAGAACTATCAGGATTAAAGACAGCTCATTTGGGAAATGTCAATTAGTTATGAAGTTGAAAGTAACTAATGATTTTATGGTTGGTTACTCTACTAGAGGTGAAT s panTro4.chr19 59184586 105 + 63644993 aaaGAACTATCAGGATTAAAGACAGCTCATTTGGGAAATGTCAATTAGTTATGAAGTTGAAAGTAACTAATGATTTTATGGTTGGTTACTCTACTAGAGGTGAAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813122 105 - 106955855 AAGGAACTGTCAGGATTAAAGACAGCTCATTTGGGAAATGTCAATTAGTTATTAAGTTGAAAGTAACTAATGATTTTATGGTTGGTTACTATACTAGATGTGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60122596 105 + 64156825 aaaGAATTATCAGGATTAAGGACAGCTCATTTGGGAAATGTCAATTAGTTATTAAGTTGAAAGTAACTAATGATTTTATGGTTGATTACTCTACTAGATGTGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55150799 105 + 59248254 AAAGAATTATCAGGATTAAGGACAGCTCATTTGGGAAATGTCAATTAGTTATTAAGTTGAAAGTAACTAATGATTTTATGGTTGATTACTCTACTAGATGTGAAT i macFas5.chr19 C 0 I 309 s papAnu2.chr19 47236273 105 + 51301725 aaagaattatcaGGATTAAGGACAGCTCATTTGGGAAATGTCAATTAGTTATTAAGTTGAAAGTAACTAATGATTTTATGGTTGGTTACTCTACTAGATGTGAAT i papAnu2.chr19 C 0 I 303 s chlSab2.chr6 46952085 105 + 50890351 AAAGAATTATCAGGATTAAGGACAGCTCATTTGGGAAATGTCAATTAGTTATTAAGTTGAAAGTAACTAATGATTTTATGGTTGGTTCCTCTACTAGATGTGAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45506399 101 + 49145316 AAAGAATTATGAGGATTGAAAACAGCTCATTTGAGGAATGTC----AGTTATTAACCTGAAAGTAACTAATGATTTTATGGTTGGTTACTCTACGAGATATGAAT i calJac3.chr22 I 4476 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=10192.000000 s hg38.chr19_GL949753v2_alt 244366 4 + 796479 AAAA s panTro4.chr19 59184691 4 + 63644993 AAAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813227 4 - 106955855 AAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60122701 4 + 64156825 AAAA i rheMac3.chr19 C 0 I 318 s macFas5.chr19 55151213 4 + 59248254 aaaa i macFas5.chr19 I 309 C 0 s papAnu2.chr19 47236681 4 + 51301725 aaaa i papAnu2.chr19 I 303 C 0 s chlSab2.chr6 46952190 4 + 50890351 AAAA i chlSab2.chr6 C 0 I 327 s calJac3.chr22 45506500 4 + 49145316 AAAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=3363.000000 s hg38.chr19_GL949753v2_alt 244370 8 + 796479 CTTCAGCC s panTro4.chr19 59184695 8 + 63644993 CTTCAGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813231 8 - 106955855 CTTCAGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55151217 8 + 59248254 aTTCTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47236685 8 + 51301725 attctcct i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45506504 8 + 49145316 ATTGTACC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e chlSab2.chr6 46952194 327 + 50890351 I e rheMac3.chr19 60122705 318 + 64156825 I a score=431133.000000 s hg38.chr19_GL949753v2_alt 244378 208 + 796479 TTTAGCCTTCTATATACATCAGTGGAAACTTAATTAAGATGCATTAATTATGTTCCAGATTGACCATCAATAAAATGTTTTTAAATCTAAATGTAGAGAATTGTAAGCATACAGTTGCAACCCGAATTTAAATGATTATAACCTTTTGGCATggtgtgatggctcacgcctctaatcccagcactttgggaggctgaggcgagtggaa s panTro4.chr19 59184703 207 + 63644993 TTTAGCCTTCTATATACATCAGTGGAAACTTAATTAAGATGCATTAATTATGTTCCAGATTGACCATCAATAAAATGTTTTTAAATCTAAATGTAGAGAATTGTAAGCATGCAGTTGCAACCCGAATTTAAATGACTATAACCTTTTGGCATggtgtggtggctcatgcctctaatccca-cactttgggaggctgaggcgagtggaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813239 208 - 106955855 TTTAGCCTTCTATATACATCAGTGGAAACTTAATTAAGATGCATTAATTATGTTCCAGATTGACCATAAATAAAATGTTTTAAAATCTAAATGTAGAGAATTGTAAGCCTACAGTTACAACCTGAATTTAAATGATTATAACCTTTTGGCATggtgtggtggctcatgcctctaatcccagcactttgggaggctgaggcgagtggaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60123023 188 + 64156825 TTTAGCCTTCTATATACATCAGTGGCAACTTAATTAAGATGC----ATTATGTTCCAGATTGACCA----------------TAATCTAAATGTAGAGAATTGTGAGCATACAGTTGCAACTCGAATTTAAATGATTATAACCTTTTGGCACggtgtggtgtctcacacctgtaatcccagcactttgggaggctgaggcgaatggaa i rheMac3.chr19 I 318 M 157 s macFas5.chr19 55151225 188 + 59248254 TTTAGCCTTCTATATACATCAGTGGCAACTTAATTAAGATGC----ATTATGTTCCAGATTGACCA----------------TAATCTAAATGTAGAGAATTGTGAGCATACAGTTGCAACTCGAATTTAAATGATTATAACCTTTTGGCACggtgtggtgtctcacacctgtaatcccagcactttgggaggctgaggcgaatggaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47236693 204 + 51301725 TTTAGCCTTCTATATACATCAGTGGCAACTGAATTAAGATGC----ATTATGTTCCAGATTGaccataaataaaatgttttttaatctaAATGTAGAGAATTGTAAGCATACAGTTGCAACCCGAATTTAAATGATTATAACCTTTTGGcacagtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgaatggaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46952521 204 + 50890351 TTTAGCCTTCTATATACATCAGTGGCAACTGAATTAAGATGC----ATTATGTTCCAGATTGACCATAAATAAAATGTTTTTTAATCTAAATGTAGAGAATTGTAAGCATACAGTTGCAACCCGAATTTAAATGATTATAACCTTTTGGCACggtgtggtggcttatgcctgtaatcccagcactttgggaggctgaggcgaatggaa i chlSab2.chr6 I 327 C 0 s calJac3.chr22 45506512 203 + 49145316 TTTAGCCTTCTATATACATCAGCGGAAAC----TTAAGATGCATTAATTATGTTCTA-ATTGATTATAAATACAGTGTTTTTAAATCTAAGTGTGGAGAATTGTAAACATATGATTGCAACCAGGATTTAAATGATTATAATCTTTTGGCACAGAgcggtggctcatgtctatcatccaagcactttgggaggctgaggcaggtggaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=244294.000000 s hg38.chr19_GL949753v2_alt 244586 161 + 796479 ggcttgagtctaggagttcgagaccagcctggcctacacggcgaaaccctgtctctactaaaat----t------------aaaaaaaatagcctcctgtggtggtgcacaactgtaatcccagctactcagaaggctgaggcacaaaaatttgcttgaact-----------ggttgcagtgagcca s panTro4.chr19 59184910 160 + 63644993 ggcttgaggctaggagttcgagaccagcctggcctacacggcgaaaccctgtctctactaaaat----a------------aaaaaaaatagcctcctgtggtggtgcacaactgtaatcccagctactcagaaggctgaggcacaaaaatt-gcttgaact-----------ggttgcagtgagcca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813447 175 - 106955855 ggcttgaggctaggagttcgagaccagcctggccaacacggtgaaaccctgtctctactaaaacaataa------------aaaaaaaccagccacctgtggtggcgcacacttgtaatcctagctacttggaaggctgaggcacaaaaatt-gcttgaactggggaggcagaggttgcagtgagcca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55151413 173 + 59248254 ggcttgaggctaggagttcgagaccagcctgaccaacacagtgaaaccctgtctctactaaaat----ac----------aaaaaaaaatagacacctgtggtggcgcacgcctgtaatcccagctacttgggaggctgaggcacaataatt-gctggaacccaggaggcagaggttgcagtgagctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47236897 172 + 51301725 ggcttgaggctaggagttcgagaccagcctggccaacacagtgaaaccctgtctctactaaaat----ac-----------aaaaaaaatagacacttgtggtggcgcacgcctgtaatcccagctacttgggaggctgaggcacaaaaatt-gctgaaacccaggaggcagaggttgcagtgagctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46952725 172 + 50890351 ggcttgaggctaggagttcgagagcagcctggccaacacagtgaaaccctgtctctactaaaat----ac-----------aaaaaaaatagacacctgtggtggcgcacgcctgtaatctcagctacttgggaggctaaggcacaaaaatt-gctagaacccaggagacagaggttgcagggatctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45506715 181 + 49145316 ggcttgaagccaggagttcaagaccaccctggctaatgtggtgaaactttgtctctactaaaat----acaaaaaaaaaaaaaaaaaaatagcaaggtgtggtggtgcacacctgtaatcccagctacctgagaggctgaggcatgagaatt-gcttgaatccaggaaaca--ggttgcagtaagctg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e rheMac3.chr19 60123211 157 + 64156825 M a score=652120.000000 s hg38.chr19_GL949753v2_alt 244747 370 + 796479 agatctcacaactccactctagcctgggcgacagagtgaaactttgtctc-----agtaaataaataaataa-ataaataaTTGTAACCTTttaaaaataaaaaaa-cccaaacaaatatatgtcctttttttgtcattattcatgatagctaaatagtgaaaacaacccaaatgtccatcaattggtgaatgcataaaccaaatgtgatataggcatagaatggaatattcttcaacagtagaaaggaacaaagaccaattacatgctctagcgtgcagagaccacgaaaacattttgctatgtgcaatTGGATTTTTGCCATTTTGTTGTTGTTTTTAATGTAGTACATTTATTTTAATTTATT-ATTTTTTAAAA s panTro4.chr19 59185070 355 + 63644993 agatctcacagctccactctagcctgggtgacagagtgaaactttgtctc-----agtaaataaataaataa-ataaataaTTATAATCTTTTAAAAATAAAAAAAaccccaacaaatatatgtccttttttggtcattattcatgatagctaaatagtgaaaacaacccaaatgtccatcaattggtgaatgcgtaaaccaaatgtgatataggcatagaatggaatattcttcaatcatgtaaaggaacagagagcaattacatgctatagcgtgcatagagcatgagaacattttgctatgtgC-------------CC---TTGTTGTTGTTTTTAATGCGGTAAATTTATTTTTATTTATT-Gtttttttaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813622 353 - 106955855 agatcgcaccactgcactctagcctgggcgacggagtgaaattttgtctc-----aataaataaataaataa-------------aaCCTTTTAAAAatgaaaaaaaccccaacaaatatatgtctttttttgg-cattattcatgacagctaaatagtgaaaacaacccaaatgtccatcaattggtgaatgcataaacaaaatgggatacaggcatagaatggaatattcttcaatcatataaaggaacaaagaccaattacatgctataacatgcatagaccgtgaaaacattatgctatgtgcaatTGGATTTTTGCCG--TTGTTGTTGTTGTTTATGTGGTAAATTTATTTTTATTTA----tttttttaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60123374 366 + 64156825 agatcacaccactgcactctagcctgggcaacagagtgagactctgtctc-----aaaataaaataaaataaaataaataattataaccttttaaaaatgaaaaaaaaac-aacaaaTgtatgtccttttgtgt-cattattcatgatagctaaatagtgaaagcaactcaaatgtccatcagttggtgaatgcataaacaaaatgtgatacagccgcagaatggaatattcttcagtcacataagggaacaaagaccagtgacatgttataacatgcatagaccatgaaaacatgattctatgtgaaaTTGGATTTTTGTCA-----TTGTTGTTGTTAATGTGataaatttatttttatttattggttttttaaaa i rheMac3.chr19 M 157 C 0 s macFas5.chr19 55151586 360 + 59248254 agatcacaccactgcactctagcctgggcaacagagtgagactctgtctc----------aaaataaaataaaataaataaTTATAACCTTTCAAAAatgaaaaaaaaac-aacaaatgtatgtccttttgtgt-cattattcatgatagctaaatagtgaaagcaactcaaatgtccatcaattggtgaatgcataaacaaaatgtgatacagctgtagaatggaatattcttcagtcacataagggaacaaagaccagtgacatgttataacatgcatagaccatgaaaacatgattctacgtgaaatTGGgtttttgtca-----ttgttgttgttaatgtgataaatttatttttatttatt-gtttttTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237069 367 + 51301725 agatcacacca---cactctagcctgggcaacagagtgagactctgtctcaaaataaaataaaataaaataaaataaataattatgacctttcaaaaatg--aaaaaacc-aacaaatGTATGTCCTTTTGTGT-CATTATTCATGATAGCT-AATAGTGaaagcaactcaaatgtccatcaattggtgaatgcataaacaaaatgtgatacagcCGTAGGATGGAATATTCTTCAGTCACATAAGGGAACAAAGACCAGTGACATGTTATAACATGCATACACCATGAAAACATGATTCTACGTGAatttgggtttttgcca--ttgttgttgttgttaatgtgataaatttatttttatttatt-gttttttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46952897 361 + 50890351 agatcacaccactgcactctagcctgggcaacagagtgagactctgtctc----------aaaataaaataaaataaataaTTATAATCTttcaaaaatgaaaaaaaaa--accaaatgtatgtccttttgtgt-cattattcatgatagctaaatagtgaaagcaactcaaatgtccatcaattggtgaatgcataaacaaaatgtgatacagccgtagaatggaatattcttcagtcacataagggaacaaagaccaatgacgtgttataacatgcatagaccatgaaaccattatgctacgtgaaatTGGGTTTTTGCCA--TTGTTGTTGCTGTTAATGTGATAAATTTATTTTTATTTATT-GTTTTTT-AAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45506896 342 + 49145316 aaattgcacctctgcactctagcctaggcgacagagtgagactctgtctc------------------agaaaataaaaGATTATAACTTCTTAAAAGT---aaaaaccc---caaacatatgttcttttgtgt-cattattcataata----aagagtgaaaacaatccagatgtccatcaactggtgaatgtataaagaaaatgtgatatatccgtagaatggaatatcattcagtcatataaaggaacaaagaccagttacatgctataacatgcatagaccgtgaaaacattacgctaagtggaaTTGGATTTTTGCCG-----TTGTTGTTGTTAATGTGGTTAAtttatttttattt-tt-attttttgaga i calJac3.chr22 C 0 I 1166 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I a score=-3178.000000 s hg38.chr19_GL949753v2_alt 245117 5 + 796479 AAAAA s panTro4.chr19 59185425 4 + 63644993 aata- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102813975 1 - 106955855 a---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60123740 3 + 64156825 aaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55151946 3 + 59248254 AAA-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237436 3 + 51301725 aaa-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46953258 3 + 50890351 AAA-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4244178 1472 - 60714840 I e calJac3.chr22 45507238 1166 + 49145316 I a score=790984.000000 s hg38.chr19_GL949753v2_alt 245122 341 + 796479 ttcaatagcttttggggaacaggtggtgtttggttacgtggataagctctttagtggtgatttttgagattttggtgcattcatcacccgagcagtgtacactgcacccaatgtgtagtcttttatcgctcatccccctcccattgttccctgtgagtccccagattccattatatccttcttatgcctttgcatcctcatagtttagctcccacttatgagaccatatgatgtttggttttccatttctgaattacttcacttggaataatggtctccaactgcatctaggttgctgcgaatgccattattttgtccctttttgtggctgagtagtattc s panTro4.chr19 59185429 341 + 63644993 ttcaatagcttttggggaacaggtggtgtttggctacgtggataagctctttagtggtgatttttgagattttggtgcattcatcactccagcagtgtacactgcacccaatgtgtagtcttttatccctcatccccctcccattgttccctgtgagtccccagagtccattatatccttcttatgcctttgcatcctcatagcttagctcccatttatgagaacatacgatgtttcgttttccatttctgaattacttcacttagaatagtgatctccaactgcatctaggttgctgcgaatgctattattttgtccctttttatggctcagtagtattc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4245650 337 - 60714840 ttcagtagtttttggggaacaggtggtgtttggttgcatgcataagttttttagtggtgatttttgagattttggcacacccatcacccgagcagtgtacactgtacccaatgtgtagtcttttatccctca-ccccctcccattgttccccctgggtccccagagtccattatatccttcttatgcctttacatcctcatagcttagctcccacttatgagaacatatgatg-atggttttcctgtcctgagttatttcacttagaataatggtctccaactgcctccaggttgctgcgaatgccattattttgttcctttttatggctga--agtattc i ponAbe2.chr19 I 1472 C 0 s nomLeu3.chr10 102813976 341 - 106955855 ttcaatagtttttggggaacaggtggtgtttggttacgtggataagttctttagtggtgatttttgagattttggtgcattcatcacccaagcagtgtacactgcacccaatgtgtagtcttttatccctcatccccctcccattgttccctgtgagtctccagattccattatatcctccttatgcctttgcatcctcatagcttagctcccacttatgagaacatatgatgtttggttttccatttctgaattacttcacttagaataatggtcttcaactgcatctaggttgctgcaaatgccattattttgtccctttttatggctgggtagtattc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60123743 341 + 64156825 ttcaatagtttttggggaataggtggtgtttggttacaggaataagttctttagtggtgatttttgagattttggtgcattcatcacccgagcagtgtacactgtacccagtgtgtggtcttttatccgtcatccccctcccattgtaccctgtgagtccccggagtccattatatcattcttgtgcctttacatcctcatagcttagctcccacttatgagaagagacaatgtttggttttccattcctgaattactccacttagaataatggtctccaacttcatctaggttgctgcgaatgccattattttgttcctttttatggctgagtagtattc i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55151949 341 + 59248254 ttcaatagtttttggggaacaggtggtgtttggttacaggaataagttctttagtggtgatttttgagattttggtgcattcatcacccgagcagtgtacactgtacccagtgtgtggtcttttatccgtcatccccctcccattgttccctgtgagtctccggagtccattatatcattcttgtgcctttacatcctcatagcttagctcccacttatgagaagagacgatgtttggttttccattcctgaattactccacttagaataatggtctccaacgtcatctaggttgctgcgaatgccattattttgttcctttttatggctgagtggtattc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237439 341 + 51301725 ttcaatagtttttggggaacaggtggtgtttggttacaggaataagttctttagtggcgatttttgagattttggtgcattcatcacccgagcagtgtacactgtacccagtgtgtggTCTTTTATCCGTCATCCCCCTCCCATTGTTCCCtgtgagtccccagagtccattatatcattatcgtgcctttacatcctcatagcttagctcccacttacgagaagagacgatgtttggttttccattcctgaattactccacttagaataatggtctccaacttcatctaggttgctgcgaatgccattattttgttcctttttatggctgagtagtattc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46953261 341 + 50890351 ttcaatagtttttggggaacaggtggtgtttggttacaggaataagttctttagtggtgatttttgagattttggtgcattcatcacccgagcagtgtacactgtacccagtgtgtggtcttttatccctcatcctcctcccattgttccctgtgagtccccagagtccattatatcattcttgtgcttttacatcctcatagcttagctcccacttatgagaagagacgatgtttggttttccattcctgaattactccacttagaataatggtctccaacgtcatctaggttgctgcgaatgccattattttgttcctttttatggctgagtagtattc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45507238 1166 + 49145316 I a score=-3522.000000 s hg38.chr19_GL949753v2_alt 245463 12 + 796479 cgtgc------------tgtgtgt s panTro4.chr19 59185770 12 + 63644993 cgtgc------------tgtgtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4245987 12 - 60714840 catgg------------ggtgtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102814317 8 - 106955855 cgtgc------------tgt---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55152290 5 + 59248254 catgc------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237780 17 + 51301725 catgcacacacacacac------- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 46953602 5 + 50890351 catgC------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45507238 1166 + 49145316 I e rheMac3.chr19 60124084 6 + 64156825 I a score=268041.000000 s hg38.chr19_GL949753v2_alt 245475 135 + 796479 gtg------------------------------------------tatatacac---------acatACACATACATGtttttcatatgtttgtggaccgttcgtatatcttcttttgagagtt-------gtcACAAAGGGAATTGGATTTGGAGGGAACAAATTTATGGCCATTTTTCAGTATAATCATCG s panTro4.chr19 59185782 135 + 63644993 gtg------------------------------------------tatatacgc---------acatACACATACATGtttttcatatgtttgtggaccgttcgtatatcttcttttgagaatt-------gtcACAAAGGGAATTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4245999 184 - 60714840 gtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtatatatatgtatatat---------acatacatatacatgttttttatatgtttgttggccatttgTATATCTTCTTTAGAGAATTGTCTAAAGTCAAAAGGGGAATTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102814325 132 - 106955855 ---------------------------------------------gatatacac---------acacaCACATACATGtttttcatatgtttgtggaccgtttgtatatcttcttttgagaatt-------gtcACAAAGGGAATTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60124090 135 + 64156825 ------------------------------------------acacacacacac---------acacacacacacacGtttttcatatgtttgtggaccgttagtgtatcttcttttgagactt-------gtcATAAAGGGAACTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55152295 135 + 59248254 ------------------------------------------acacacacacac---------atacacacacacacGtttttcatatgtttgtggaccgtttgtgtatcttcttttgagactt-------gtcATAAAGGGAACTGGACTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237799 144 + 51301725 ------------------------------------------acacacacacacgtttttcatatacacacacacacgtttttcatatgtttgtggaccgtttgtatatcttcttttgagactt-------GTCATAAAGGGAACTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 46953607 119 + 50890351 -------------------------------------------------------------------ACACACACACGtttttcatatgtttgtggaccgtttgtatatcttcttttgagactt-------gtcACAAAAGGAACTGGATTTGGAGGGAACAATTTTATGGCTATTTTTCAGTATAATCATCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45507238 1166 + 49145316 I a score=810435.000000 s hg38.chr19_GL949753v2_alt 245610 353 + 796479 GGTGAAGACAGTGTCTGTTCGGCCAGTGTCGCTTTAATCCATTACCTGTAGCCAGGAAGGGAGACGTTTATCGCAGAGATAGGCACCAACCTGGAATGC-TTTCCTCAAAGGCGATTAACTGTAATGTGAACCCGAAATTTCACCGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGATGTGAAATGTCCAGGTGTTTTTT-TGTACGGTTTTGTTGCTGAAAGACACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGAACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGA-------------------------------------------GGCACAGGAGTGACACTAGAGAGGGGGTCACG s panTro4.chr19 59185917 395 + 63644993 GGTGAAGACAGTGTCTGTTCGGCCAGTGTTACTCTAATCCATTACCTGTAGCCAGGAATGGAGACGTTTATTACAGAGATAGGCACCAACCTGGAATGC-TTTCCTCAAAGGTGATTAACTGTAGTGTGAACCCGAAATTTCACCGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGATGTGAAATGTCCAGGTGTTTTTT--GTACGGTTTTGTTGCTGAAAGACACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGAACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGAACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGAGGCACAGGAGCAACCCTAGGGAGGGGGTCACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4246183 309 - 60714840 GGTGAATATAGTGTCTGTTCGGCCAGTGTTACTTTAATCCATTACCTGTAGCCAGGAAGGGAGACGTTTATCACGGAGATAGGCACCAACCTGGAATGC-TTTCCTCAAAGGTGATTAACTGTAGTGTGAATCCTAAATTTCACCACAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGATGTGAAACGTCCAGGTGTTTTTT--GTATGGTTTTGTTGCTGGAAGACACAATACCCTCTAATTTAAGGCATCCTCTCCAAATACCACTGA--------------------------------------------------------------------------------------GGCACAGGAGCGACACTAAGGAGGGGGTCACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102814457 310 - 106955855 GGTGAATACAGTGTCTGTTCGGCCACTGTTACTTTAATCCATTACCTGTAGCCAGGAAGGGAGACGTTTATCACAGAGATAGGCACCAACCTGGAATGC-TTTCCTCAAAGGTGATTAACTGTAGTGTGAGCCCTAAATTTCACTGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGATGTGAAATGATCAGGCGTTTTTTTTGGATGATTTTGCTGCTGAAAGACACAATACCCTCTAATCTAAGGCATCCTCTCCAAATCCCACTGA--------------------------------------------------------------------------------------GGCACAGCAGCGACACCAGGGA-GGGGTCACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60124225 310 + 64156825 GGTGAATACAGAATCTTTTCGGCCAGTGTTACTTTAATCTGTTACCTGTAGCCAGGAAGGGAGACGTTTATCACAGAGACAGGCACCAACCTGGGATGCTTTTCCTCAAAGGTGAGTGACTGTAGTGTGAGCCCTAAATTTCAGTGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGACGTGAAGTGTCCAGGTGTTTTTC--GTATGGTTTTGTCGCTGAAAGACACAACTCCCTCTAATCTAAGGCATCCTCTCC-------------------------------------------AAATCCCACTGA-------------------------------------------GGCACAGGAGCGACACTAGGGATGGGGTCCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55152430 310 + 59248254 GGTGAATACAGAATCTTTTCGGCCAGTGTTACTTTAACCCATTGCCTGTAGCCAGGAAGGGAGACATTTATCACAGAGACAGGCACCAACCTGGGATGCTTTTCCTCAAAGGTGAGTGACTGTAGTGTGAGCCCTAAATTTCAGTGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGACGTGAAGTGTCCAGGTGTTTTTC--GTATGGTTTTGTCGCTGAAGGACACAACTCCCTCTAATCTAAGGCATCCTCTCC-------------------------------------------AAATCCCACTGA-------------------------------------------GGCACAGGAGCGACACTAGGGAGGGGGTCCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47237943 309 + 51301725 GGTGAATATAGTGTCTCTTCAGCCAGTGTTACTTTAACCCATTGCCTGTAGCCAGGAAGGGAGATGTTTATCACAGAGATAGGCACCAACCTGGGATGCTTTTCCTCAAAGGTGAGTAACTGTAGTGTGAGCCCTAAATTTCAGTGCAGTTTGGTCCTGATTTGGCACAAGAT-ATGCTTTATCCACTGACGTGAAATG-CCAGGTGTTTTTC--GTATGGTTTTGTTGCTGAAAGACACAACTCCCTCTAATCTAAGGCATCCTCTCC-------------------------------------------AAATCCCACTGA-------------------------------------------GGCACAGGAGCGACACTAGGGAGGGGGTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46953726 310 + 50890351 GGTGAATATAGTGTCTCTTCAGCCAGTGTTACTTTCATCCATTG-CTGTAGCCAGGAAGGGAGACGTTTATCACAGAGATAGGCACCAACCTGGGATGCTTTTCCCCAAAGGTGAGTGACTGTAGTGTGAACCCTACATTTCAGTGCAGTTTGGTCCTGATTTGGCACAAGATAATGCTTTATCCACTGACGTGAAATGTCCAGGTGTTTTTC--GTATGGTTTTGTTGCTGAAAGACACAACAGCCTCTAATCTAAGGCATCCTCTCC-------------------------------------------AAATCCCACTGA-------------------------------------------GGCACAGGAGCGACACTAGGGAGGGGGTCCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45508404 307 + 49145316 GGTGAATATGGT-TCTGTTCAGCTAGTGTTACTGTAATCCATTATCCATACTCAGGAAGGGAGACGTTTATCAC--AGATAGACACAAACCTGGAATGCTTTTCCCCAAAGGTGAGTAACTATAGTGTGAGCCCTGAAATTCACTGTAGGTAGGTCCTGATTTGGCACACGAT-ATGCTTTATCCACTAATGTGATATGTCCAGGTTTTTTTT--GTATGGTTTTGTTGGTGAAAGACACAATACCCTCTAATCTAAGGTATCTTCTCC-------------------------------------------AAATCCCACTGA-------------------------------------------GGCACAGGTGCAGCATTAGGGAGGGAGTCATA i calJac3.chr22 I 1166 C 0 e canFam3.chr1 19722729 22550 - 122678785 T a score=1381983.000000 s hg38.chr19_GL949753v2_alt 245963 453 + 796479 GAGCTTCCTGAGAGAGATTCGCCTCCTGAACCCTGGGCAGATCCTCCCCACCTTGGGATCTCTGTGAACCTCTGGGGTCTTCTATTCAATCAGGACCAAGTTGTGAGGTGGGATTCCTTCCAGGCTACAGTCTCCCCTCTCCCTCTTTCAATTTCATCAAGACAGATCAGAGGTTTGTGGGA---GGGAGTCATGGCGTCTCCT-CCACAGCCCCCAGCTGTGCAGATGGATGAGGCCACCG----TTCCTGGATGGAGTAAATC----------TACTGGGAACCTGG-GTTCTCCATCACGAGGTTGTCCCGTCATCAGCCCCAAAAGAAGGGGAACTGCCCTCTCCGGGAGCTTGACTTTCATTTCCCCAAGGCTGGGACTGGGGCAGG-CACCAGGCTGTCTTCAGATACTTCATACAGAAATGGTATCTCCCTGACCCTTTTCTGCGATTTGCCTCATCTGTCTTCAT s panTro4.chr19 59186312 453 + 63644993 GAGCTTCCTGAGAGAGATTCGCCTCCTGAACCCTGGGCAGATCCTCCCCACCTTGGGATCTCTGTGAGCCTCTGGGGTCTTCTATTCAGTCAGGACCAAGTTGTGAGGCGGGATTCCTTCCAGGCTACAGTCTCCCCTCTCCCTCTTTCAATTTCATCAAGACAGATCAGAGGTTTGCGGGA---GGGAGTCATGGCGTCTCCT-CCACAGCCCCCGGCTGTGCAGATGGATGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACTGGGAGCCTGG-GTTCTCCATCATGAGGTTGTCCCGTCATCAGCCCCACAAGAAGGGGAACTGCCCTCTCCGGGAGCTTGACTTTCATTTCCCCAAGGCTGGGGCTGGGGAAGG-CACCAGGCTCTCTTCAGATACTTCATACAGAAATGGTATCTCCCTGACCCTTTTCTGCAATTTGCCTCATCTGTCCTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4246492 451 - 60714840 GAGCTTCCTGAGAGAGATTCGCCTCCTGAACCCTGGA-AGATCCTCCCCACCTTGGGATCTCTGTGAACCTCTGGGACCTCCTATTCAATCAGGACCAAGTTGTGCGGCAGGATTCCTCCCAGGCTACAGTCTCCCTTCTCCCTCTTTCAATTTCATCAAGACAGATTAGAGGTTTGCAGGT---GGGAGTCATGGCGTCTCCTCCCACAG-CCCTGGCTGTGCAGATGGATGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACCGGGAGCCTGG-GTTCTCCATCACGAGGTTGTCCCGTCATCAGCTCCACAGGAAGGGGAACTGCCCTCTCCGGGAGCCTGGCTTTCATTTCCCCAATGTTGGG-TTGGGGAAGG-CACCAGGCTCTCTTCAGATACTTCATACAGAAATGGTATCTCCCTGACCCTTTTCTGCGATTTGCCTCATCTGTCCTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102814767 454 - 106955855 GAGCTTCCTGAGAGAGATTTGCCTCCTGAACTCTGGGCAGATCCTCCCCACCTTGGGATCTCTGTGAACCTCTGGGGTCTCCTATTCAATCAGGACCAAGTTGTGAGGCGGGATTGCTCCCAGGCTACAGTCTCCCCTCTCCCCCTTTCAATTTCATCAAGACAGATCAGAGGTTTGCAGGT---GGGAGTCATGGCGTCTCCTCCCACAGCCCCTGGCTGTGCAGATGGATGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACTGGGAGCCTGG-GTTCTCCATCACGAGGTTGTCCCGTCAGCAGCCCCACAGGAAGGGGAACTGCCCTCTCCGGGAGCCTGGCTTTCATTTCCCCAAGGCTGGGGCTGGGGAAGG-CACCAGGCTCTCTTCAGATACTTCATACAGAAATGGCATCTCCCTGACCCTTTTCTGCGATTTGCCTCATCTGTCCTCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60124535 454 + 64156825 GAACTTACTGCGAGAGATTCGCCTCCTGAACCCTGGGCGGATCCTCCCCACCCTGGGATCTCTGCGAACCTCTGGGGCCTCCTATTCAATCAGGACCAAGTTGTGAGGTGGGATTCCCCCCAGGCTACAGTCTCCCCGCTCCCTCTTTCAATTTCATCAACACAGATCAGGAGCGTGAGTGT---GGGAGTCATGGCGTCTCCTCCCACAGCCCCTGGCTGTGGAGATGGACGAGGCCACAG----TTCCTGGGTGGAGTAAATC----------TACTGGAAGCCTGG-GTTCTCCGTCATGAGGCTGTCCCGTCAGCAGCCCCACAGGACGGGGAACTGCCCTCTCCGGGAGCCTGGCTTCCATTTCCCCAAGGCTGGGGCTGGGGCAGG-TACTAGGCTCTCTTCAGATACTTCGTACAGAGATGGTATCTCCCTGACCCTTTTCTGCTATTTGCCCCATCGGTCCTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55152740 454 + 59248254 GAACTTACTGCGAGAGATTCGCCTCCTGAACCCTGGGCGGATCCTCCCCACCCTGGGATCTCTGCGAACCTCTGGGGTCTCCTATTCAATCAGGACCAAGTTGTGAGGTGGGATTCCTCCCAGGCTACAGTCTCCCCGCTCCCTCTTTCAATTTCATCAAGACAGATCAGGAGCATGAGTGT---GGGAGTCATGGCGTCTCCTCCCACAGCCCCTGGCTGTGGAGATGGACGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACTGGGAGCCTGG-GTTCTCCGTCATGAGGCTGTCCCGTCAGCAGCCCCACAGGAAGGGGAACTGCCCTCTCCGGGAGGCTGGCTTCCATTTCCCCAAGGCTGGGGCTGGGGCAGG-CACCAGGCTCTCTTCAGATACTTCGTACAGAGATGGTATCTCCCTGACCCTTTTCTGCTATTTGCCCCATTGGTCCTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47238252 454 + 51301725 GAACTTCCTGTGAGAGATTCGCCTCCTGAACCCCGGGCAGATCCTCCCCACCCTGGGATCCCTGCGAACCTCTGGGGTCTCCTATTCAATCAGGACCAAGTTGTGAGGTGGGATTCCTCCCAGGCTACAGTCTCCCTGCTCCCTCTTTCAATTTCATCAAGACAGATCAGGAGCATGAGTGT---GGGAGTCATGGCGTCtcctcccacagcccctggctCTGCAGATGGAGGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACTGGGAGCCTGG-GCTCTCCATCATGAGGCTGTCCCGTCAGCAGCCCCACAGGAAGAGGAACTGCCCCCTCCGGGAGCCTGACTTCCATTTCCccaaggctggggctggggcagg-cacCAGGCTCTCTTCAGATACTTCATACAGAAGTTGTATCTCCCTGACCCTTTTCTGCTGTTTGCCCCATCGGTCCTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46954036 450 + 50890351 GAACTTCCTGCGAGAGATTCGCCTCCTGAACCCCGGGCAGATCCTCCCCACCCTGGGATCCCTGTGAACCTCTGGGGTCTCCTATTCAATCAGGACCAAGTTGTGAGGTGGGATTCCTCCCAGGCTACAGTCTCCCCGCTCCCTCTTTCAATTTCATCAAGACAGATCAGGAGCGTGAGTGT---GGGAGTCGTGGCGTCTCCTCCCACAGCCCCTG----TGCAGATGGAGGAGGCCACAG----TTCCTGGATGGAGTAAATC----------TACTGGAAGCCTGG-GTTCTCCGTCACGAGGCTGTCCCGTCAGCAGACCCACAGGAAGGGGAACTGCCCTCTCCGGGAGGTTGGCTTCCATTTCCCCAAGGCTGGGGCTGGGGCAGG-CACCAGGCTCTCTTCAGATACTTCGCACAGAAATGGTATCTCCCTGACCCTTTTCTGCTATTTGCCCCATCTGTCCTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45508711 453 + 49145316 GAGTTTCCTGTGAGAGATTTGCCTTCTGAACCCTGGGCAGAGCCTCCCCACCTTGGGATCTCTGTGAAACTCTGGGGTCTCCTAATAGATCCGGACCAAGTTGTGAGGTGCGATTCCTCCCAGGCTATAGTCTCCCCTCGTCCTCTTTGAATTTTACCAAGACAAATCAGGGTTTTGAGTGT---GGGAATCA--GCATCGCCTCCCACAGCCCCTGGCTGTGCAGATGGATGCGGCTACAG----TGCCTGGGTGGAGTAAATC----------TACTGGGAGCCTGG-ATTCTTCATCTTGAGGTTGGCCCATCAGCAGCCCCACAGGGAGGGGAAATGCCGTCTCTGGGAGCCTGGCTTTCATTTCCTTTTAGATGAGGCTGGGGGAAGCCACCAGGCTCTTTTCATACAATTCAGACAGAAATGGTGTCTCCCTGATTTTTTTCTGCTGTTTGCTTCATCTGTTCCCAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3868987 456 + 145441459 GAGTCCTTTGTAAGAGATTTG--TCCCTAAGGCTGAGGAAGTCTGC---------AGAAACATCTGAGACCCTGGGGTTTCCTTTTGGGTGAGTGCTGGTCTACAGGCCATGATCATTTCCAGACATCAGTATCCCCTCCCCCTCTTCACATCTCACCAAGACAGAGCAGGGCTGTGAAGGTGCAGGAGGACATGGCAACTCCCCTCATTGGCTGCAACTGTGCTTGAGGGCAGAGCTACAGAGCCTTTCTGAAGGGATTGGGTACAGGGTGTGGCACTGGAGGCAGGGCAGTCCCCATGACATGGTCAT-ATATCAGCAGCCCCACAGAAAGAGGAACTGCCCTCCTCAGGACCATG-CTCTGACTTCCTCAATGGTGGGACTAGGCCAGG-CAGTAGACCCTCTGCCATTAGGTTTTACACAGATGGCGATTCCTCATCCC---ACCAGTGTCTGCCTCACCTGTGCACAT i mm10.chr7 N 0 T 29455 e canFam3.chr1 19722729 22550 - 122678785 T a score=506249.000000 s hg38.chr19_GL949753v2_alt 246416 172 + 796479 CTCATCAAGGGTCAGGACGTAGGAGCCGACAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTGACTGGGGGCTTGTTCTTCTTCTCAGAGCCTCCCTGTGGGGTTCTCTTCCCTCCTTCAGCCTGTCCATCAACACAGCATTGCGGGATCCTTACCATGGCA s panTro4.chr19 59186765 172 + 63644993 CTCATCAAGGGTCAGGACGTAGGAGCCGATAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTGACTGGGGGCTTGTTCTTCTTCTCAGAGCCTCCCCGTGGGGTCCCCTTCCCTCCTTCAGCCTGTCCATCAACACAGCATTGCGGGATCCTTACCATGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4246943 172 - 60714840 CTCATCAAGGGTCAGGACATAGGAGCCGATAGACCAAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTGACTGGGGGCTTGTTCTTCTTCTCAGAGCCTCCCTGTGGGGTCCCCTTCCCTCCTTCAGCCCGTCCATCAACACAGCATTGCGGGATCCTTACCATGGCA i ponAbe2.chr19 C 0 I 213 s nomLeu3.chr10 102815221 172 - 106955855 CTCATCAAGGGTCAGGACATAGGAGCCGATAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGCTGACTGGGGGCTTGTTCTTCTTCTCGGAGCTTCCCCGTGGGGTCCCCTTCCCTCCTTCAGCCCGTCCATCAGCACAGCATTGCGGGATCCTTACCATGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60124989 172 + 64156825 CTCACCAAGGGTCAGGACATAGGAGCCAATAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTCACTGGGGCCTTGTTCTTCTTCTTAGAGCCTCCCCGTGGGGTCTCCTTCCTTCCTTCAGCCCGTCCATCAACACAGCATTGTGGGATCCTTACCATGGAG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55153194 172 + 59248254 CTCACCAAGGGTCAGGACATAGGAGCCAATAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTCACTGGGGCCTTGTTCTTCTCCTTAGAGCCTCCCCGTGGGGTCTCCTTCCTTCCTTCAGCCCGCCCATCAACACAGCATTGTGGGATCCTTACCATGGCG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47238706 172 + 51301725 CTCACCAAGGATCAGGACATAGGAGCCAATAGACCCAGCACCTTTCTGAGTCTGTCCTGTCCAAGTGAGGGTCACTGGGGGCTTGTTCTTCTTCTCAGAGCCTCCCCGTGgggtctccttccttccttcagccTGTCCATCAACACAGCATTGTGGGATCCTTACCATGGCG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46954486 172 + 50890351 CTCACCAAGGGTCAGGACATAAGAGCCAATAGACCCAGCAGCTTTCTGAGTCTGTCCTGTCCAAGTGAAGGTCACTGGGGCCTTGTTCTTCTCCTTAGAGCCTCCCCATGGGGTCTCCTTCCTTCCTTCAGCCCGTCCATCAACACAGCATTACGGGATCCTTACCATGGCG i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45509164 166 + 49145316 CTCATAAAGGGTCAAGACACAGGAGCCAATAGACCCAGCACCTTTCTGAATTTGTCCTGTCTAAGTGAGGGTTACTAGGTGCTCGTTCTT---CTCAGAACCTCCCCATGGGTTCCTCT---CTCCTTTAGGCTGTCCATCAAAGCAGCATTGCAGGATCCTTACCAAGGCA i calJac3.chr22 C 0 I 8 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T a score=3771335.000000 s hg38.chr19_GL949753v2_alt 246588 1335 + 796479 TCCAGCCCTGGAGATGCTTCAGGAAAGTTGCAGGTCCATGCTGCAGGACAGGCTCAGATCAGCAGAG--ACGCATCTCACATCGGGCTGTGAAATTCAAGTTGAGCTGCAATTGGCAATGAGAAGAAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTATGGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTT-----CTTTTTTTTCTTCCTATTTTTTTTAATAGTGTTCAGGTCCCCCTCCCTTAAAAGTAACCTCTGAGTCATTCCTGCCTCCTTGGCGTCCCTCCCACCCCCAGCCCCGCTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGTTTTGGGAACAAGTACTT-GTCTTGAGCTCTGATTTGGGGGTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTCACCTTCATCCCTGCGtgcatgaccttgggcagtaagtcccatctctgagcctcggtttcctcatttggagcctgttgtcatgaacccccctcctgagtggttttggggGCCAGTGGTGCCTGGGTCATGGGAGGGCCTCAGTCATGGTACATTTCCAGACCGGGTTAAGTCTTG-GGGGTTGAAACATGAGTGGATCCTGGTGTTGGACTGCACAGTCACGGTGAGTGACTTATGTGCTCAACAGCCCACATCTGCTCCTAACACTGGGAAAACCTACTT-ATAATGTGTCTGAAATATGTAGCCATGGTCCAATGAAGAAAATGAGAAATGAGACTTCCTGTCATAGGCAGGAAACCTTAAGAAGCAGAAGATGCCAGCGCCGAGGGGCTGCTGGTGACTTGCAAAG-CTGGGGGTCACTAAGGGGGAGGTTTCTGCCTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGACAGGGAGGGGTCGGGGTTTTGGATGAAAGTGGGAAGTTGTGGCTCCTTCTCCCCTGTGTTTGTGGATGGCACTGGGATATCTCTGCTCATTGACTCAGGTCCATGGTCAGCCCTGAGCCGCCT-CCTCCA--TGTGTGTGAAACAGATTCACTGCAGCGTTGTCACACATGGGCGTCTGTCCCACATGCGAGTCTGAGGCTCACACTGGACCCT-CCCTGCTGGTTACAGCCCTGAGTAGACTCATGTGGCACTGGCAGGTGGAACCATCTCCCCTTTTCCAGCCTTAACTCCCAGCACAGCCCTGGTGGAAACCCTCTCTGGAAGATGAGGCATGTGGGAAGCATGTGTCCAAAAATGACAAGGAGAAGGAATTATCCTAATGATCAAAAGTGCTATGATGggccaggcaccgtggctcatgcctgcagtc- s panTro4.chr19 59186937 1333 + 63644993 TCCAGCCCTGGAGATGCTTCAGGAAAGCTGCAGGTCCATGCTGCAGGACAGGCTCAGATCAGCAGAG--ACGTATCTCACATCGGGCTGTGAAATTCAAGTTGAGCTGCAATTGGCAATGAGA--AAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTATGGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTT-----CTTTCTTTTCTTTCTA-TTTTTTTAATAGTGTTCAGGTCCCCCTCCCTTAAAAGTAACCTCTGAGTCATTCCTGCCTCCTCGGCGTCCCTCCCACCCCCAGCCCCGCTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGTTTTGGGAACAAGTACTT-GTCTTCAGCTCTGATTTGGGGGTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTCACCTTCA-CCCCGTctgcatgactttgggcagtaagtcccatctctgagcctcggtttcctcatttggaacttgttgtcatgaacccccctcctgagtggttttggggaCCAGTTGTGCCTGGGTCATGGGAGGGCCTCAGTCATCGTACATTTCCAGACCGGGTTAAGACTTGAGGGGTTGAAACATGAGTGGATCCTGGTGTTGGACTGCACAGTCACGGTGAGTAACTTATGTGCTCAACAGCCCACATCTGCTCCTAACATGGGGAAAACCTACTT-ATAATGTGTCTGAAATATGTAGCCACGGTCCTACGAAGAAAATGAGAAATGAGACTTCCTGTCATAGGCAGGAAACCTTAAGAAGCAGAAGAGGTCAGAGCCGAGTGGCTGCTGGTGACTTGCAAAGTCTGGGGGTCACTAAGGGGGAGGTTTCTGCCTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGACAGGGAGGGGTCGGGGTTTTGGATGAAAGTGAGAAGTTGTGGGTCCTTCTCCCCTGTGTTTGTGGATGGCACTGGGATATCTCTGCTCATTGACTCAGGTCCATGGTCAGCCCTGAGCCGCCT-CCTCCA--TGTGTGTGAAACAGATTCACTGGAGCATTGTCACACACGGGCGTCTGTCCCACATGTGAGTCTGAGGCTCACACTGGACCCT-CCCTGCTGGTTACAGCCCTGAGCAGACTCATGTGGCACTGGCAGGTGGAACCATCTCCCCTCTTCCAGGCTTAACTCCCAGCACAGCCCTGGTGGAAACCCTCTCTGGAAGATGAGGCATGTGGGGAGCATGTGTCCAAAACTGACAAGGAGGAGGAATTATCCTAATGATCAAAAGTGCTATGATGggccgggcaccgtggctcatgcctgcagtc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4247328 1333 - 60714840 CCCAGCCCTGGAGATGCTTCAGGAAAGCTGCAGGTCCATGCTGCAGGACAGGCTCAGATCAGCAGAG--ATGCATCTCACATCGGGCTGTGAAATTCAAGTTGAGCTGCAATTGGCAATGAGA--AAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTATGGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTT-----CTTTTTTTTCTTCCTA--TTTTTTAATAGTGTTCAGGTCCGCCTCTCTTAAAAGTAACCTCTAAGTCATTCCTGCCTCCTCAGTGTCCCTCCCACCCCCAGCCCCGCTTCCTTGGACATTCCCCTGCATTTCAGTCTGCCTTCAAGGTTTTGGGAACAAGTACTT-GTCTTGAGCTCTGATTTGGGGGTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTCACCTTCATCCCTGCctgcatgaccttgggcagtaagctccatctctgagcctcggtttcctcatttgGAGCTTGTTGTAATGAATCCCCCTCCTGAGTGATTTTGGGGGCCAGTGGTGCCTGGGTCATGGGAGGGCGTCAGTCGTCATACATTTCCAGACCCGGTTAATACTTGAGGGGCTGAAACATGAGTGGATCCTGGTGTTGGACTGCACAGTCACGGTGAGCAACTTACGTGCTCAACAGCGCACATCTGCGCCTAACACTGAGAAAACCTACTT-ATAATGTGTCTGAAATATGTAGCCATGGTCCTACGAAGAAAATGAGAAATGAAACTTCCTGTCATAGGCAGGAAACTTTAAGAAGCAGAAGAGGTCAGAGCCGAGTGGCTGCTGGTGACTTGCAATG-TCAGGGGTCACTAAGGTGGAGGTTTCTGCCTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGACAGGGAGGGGTCATGGCTTTGGATAGAAGTGGGAAGCTGTGGCTCCTTCTCCCCTGTGTTTGTGGATGGCACTGGGATATCTCTGCTCATTGACTCAGGTCCATGGTCAGCCCTGAGCCGCCTCCCTCCA--TGTGTGTGAAACAGATTCACTGCAGTGTTGTCACACATGGGCATATGTCCCACATGCGAGTCTGAGGCTCACACTGGACCAT-CCCTGCTGGTTACAGCCCTGAGCAGACTCATGTGGCACTGGCAGATGGAACCATCTCCCCTTTTCCAGCCTTAATTTCCAGCACAGCCCTGGTGGAAACGCTCTCTGGAAGATGAGGCATGTGGGAAGCATGTGTCCAAAAATGACAAGGAGGAGGAATTATCCTAATGATCAAAAGTGCTGTGATAggccgggcaccgtggcttatgcctgcagtc- i ponAbe2.chr19 I 213 C 0 s nomLeu3.chr10 102815393 1330 - 106955855 TCCAGCCCTGGGGATGCTTCAGGAAAGCTGCAGGTCCATGCTGCAGGACAGGCTCAGATCAGCAGAG--ACGCATCTCACATCGGGCTGTGAAATTCAAGTAGAGTTGCAATTGCCAA-GAGA--AAAAAAGGAGAAATAAAGAAATGCTGACTGTTC-TTTTGTCTTTGGAGTAT-GGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTT-----CTTTTTTTTCTTCGTA--TTTTTTAATAGTGTTCAGGTCCCCCTCCCTTAAAAGTAACCTCTGGGTCATTCCTGCCTCCTCGGCTTCCCTCCGACCCCCAGCCCCGCTTCCTGGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGTTTTGGGAACAAGTACTT-GTCTTGAGCTCTGATTTGGGGGTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTCACCTTCATCCCTGCctgcatgaccttgggcagcaagtcccatctctgagcctcggtttcctcatttggagcttgttgtcatgaacccctgtcctgtgtg-ttttgcaggCCAGTGGTGTCCAGGTCATGGGAGGGCCTCAGTCATGGTACATTTCCAGACCGGATTAAGACTTGAGGGGTTGAAACGTGAGTGGATCCTGGTGTTGGACTGCACAGTCACGGTGAGTGACTTATGTGCTCAACAGCCCACATCTGCTGCTAACACTGGGAAAACCTACTT-ATAACATGTCTGAAATATGTAGCCACGGTCCTACGAAGAAAATGAGAAATGAAACTTCCTGTCATAGGCAGGAAACCTTCAGAAGCAGAAG-GGTCAGAGCCGAGTGGCTGCTGGTGACTCGCAAAGTCTGGGGGTCACTAAGGGGGAGGTTTCTGCCTCTGTATGAGACAGAGGAGAAC------CCCAGGGCCCTCACAGACAGGGAGGGGTCATGGCTTTGGATGAAAGTGGGAGGTTGTGGCTCCTTCTCCCCTGTGTTTGTGGATGGCACTGGGACATCTCTGCTCATTGACTCAGGTCCATGGTCAGCCCTGAGCCGCCT-CCTCCA--TGTGTGTGAAACAGATTCACTGCAGCGTTGTCACACATGGGCGTCTGTCCCACATGTGAGTCTGAGGCTCATGCTGGACTCTCCCCTGCTGGTTGCGGCCTTGAGCAGACTCATGTGGCACTGGCAGGTGGAACCATCTCCCCTTTTCCAGCCTTAACTCCCAGCACAGCCCTGGTGGAAACCCTCTCTAGAAGATGAGGCATGTGGGAAGCGTGTGTCCAAAAATGACAAGAAGAAGGAATTATCCTAATGATCAAAAGTGCTATGATGggctgggcaccgtggctcatacctgcagtc- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60125162 1328 + 64156825 CCCAGCCCTGGGGATGCTTCAGGGAAGCTGCAGGTCCCTGCTGCAGGGCGGACTCAGATCAGCAGAG--ACGTGTCGCACACCTGGCTGTGAACTTCAAGTCGAGCTCCAAATGGCAATGAG---AAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTCTGGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTCCtttttttttttttttttttt--ttttttGTCTGT----------CCCTCCCTTAAAAGTAACCTCTGAGTCATTCCCGCCTCCTCGGTGTCCCTCCCACCCTCAACCCCGCTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGGTTTGGAAACAAGTACTTAGTCTTGAGTTCTGATTTcgggttgggatagggacttaatt---ttttctgaattgctgaccttcacccctgcctgcatgaccttgggcagtaagtcccatctctgagcctcggtttcctcatttgGGGCCTGTTGTCATGAACTCCCCTCCTGAGCG-GTTCGGGGGCCAGTTGTGCCTGGGTCATGGGAGGGCCTCGGTCATGGCACATTTCCAGACCGGGTTAAGACTTGAGGGGTGGACACATGCGTGGATCCTGGTGTTGGACTGTACAGTCACGGTGAGCGACTGACGTGCTCAACAGCCCACATCTGCTCCCAACACTGGGAAAACCTACTT-ACAATGTGTCTGAAATATGTAGGCACAGTCCTACGAAGAAAATGAGAAATGAAACTTCCTGTCATAGGCAGGAAACCTTAAGAAGCAGAAGAGGTCGGGGCTGAGCGGCTGCTGGTGACTTGCAATGTCAGGCGGTCACTAAGGGGGAGGTTTCCACCTCTGTATGAGACAGAGGAGAAC------CTCCGGGCCCTCACACTCAGGGAGGGGTCATGGTTTTGGACGGAAGTGGGGAGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATGGCACTGGGATATCTCTGCCCATTGACTCAGGTCCATGGTCACCCCTGAGCCGCCT-CCTCCA--TGTGTGCGAAACAGATTCACTGTAGCGTTATCACACATGGGCGTCTGTCCCGCATGTGAGCCTGAGGCTCACATTGGCCCCTCCCCTGCTGGTGACAGCCCTGAGCAGACTTGTGTGGCACTGGCGGGTGGCACCATCTCCCCTTTTCCAGCCTTAGCTCCCAGCACAGCCCTGGTAGAAACCCTATCTGGAAGGTGAGGCATGTGGGAAGCATGTGTCCAAGAATGACAAGAAGGAGGAATTATCCTCATGATCAAAAGTGCTATGATGggccgggcaccgtggctcatgcctgcagtc- i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55153367 1338 + 59248254 CCCAGCCCTGGGGATGCTTCAGGGAAGCTGCAGGTCCCTGCTGCAGGGCGGACTCAGATCAGCAGAG--ACGCGTCGCACACCTGGCTGTGAACTTCAAGTCGAGCTGCAAATGGCAATGAG---AAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTCTGGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTCCttttttttttttttttctta--ttttttAGCAGTGTTCACCTCCCCCTCCCTTAAAAGTAACCTCTGAGTCATTCCCGCCTCCTCGGTGTCCCTCCCACCCTCAACCCCGCTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGGTTTGGAAACAAGTACTTAGTCTTGAGTTCTGATTTCGGGTTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTGACCTTCACCCCTGCctgcatgaccttgggcagtaagtcccatctctgagcctcggtttcctcatttgGGGCCTGTTGTCATGAACTCCCCTCCTGAGCG-GTTCGGGGGCCAGTTGTGCCTGGGTCATGGGAGGGCCTCGGTCATGGCACATTTCCAGACCGGGTTAAGACTTGAGGGGTGGACACATGCGTGGATCCTGGTGTTGGACTGTACAGTCACGGTGAGTGACTGACGTGCTCAACAGCCCACATCTGCTCCCAACACTGGGAAAACCTACTT-ACAATGTGTCTGAAATATGTAGGCACAGTCCTACGAAGAAAATGAGAAATGAAACTTCCTGTCATAGGCAGGAAACCTTAAGAAGCAGAAGAGGTCGGGGCTGAGCGGCTGCTGGTGACTTGCAATGTCAGGCGGTCACTAAGGGGGAGGTTTCCACCTCTGTATGAGACAGAGGAGAAC------CCCCGGGCCCTCACACTCAGGGAGGGGTCATGGTTTTGGACGGAAGTGGGGAGTTGTGGCTCCTTCTCCCCTGTGTTTGTGGATGGCACTGGGGTATCTCTGCCCATTGACTCAGGTCCATGGTCACCCCTGAGCCGCCT-CCTCCA--TGTGTGCGAAACAGATTCACTGTAGCGTTATCACACATGGGCGTCTGTCCCGCATGTGAGCCTGAGGCTCACATTGGCCCCTCCCCTGCTGGTGACAGCCCTGAGCAGACTTGTGTGGCACTGGCGGGTGGCACCATCTCCCCTTTTCCAGCCTTAACTACCAGCACAGCCCTGGTAGAAACCCTCTCTGGAAGAGGAGGCATGTGGGAAGCATGTGTCCAAGAATGACAAGAAGGAGGAATTATCCTCATGATCAAAAGTGCTATGATGGGCCGGGCACCGTGGCTCATGCTTGCAGTC- i macFas5.chr19 I 1 I 22451 s papAnu2.chr19 47238879 1335 + 51301725 CCCAGCCCTGGGGATGCTTCAGGGAAGCTGCAGGTCCCTGCTGCAGGGCAGACTCAGATCAGCAGAG--ACACGTCGCACATCTGGCTGTGAACTTCAAGTTGAGCTGCAAATGTCAgtgag---aaaaaaggagaaataaagaaatgctgACTCTTC-TTTTGTCGTTGGAATATGGGTTTTATTTCTTCCAGTTTCC--TTCTTAgacttccctc--tttttttttttttttctta--ttttttaacagtgCTCACCTCCCCCTCCCTTAAAAGTAACCTCTGAGTCATTCCTGCCTCCTCGGtgtccctcccacccccaaccccgcTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGGTTTGGAAACAAGTACTTAGTCTTGAGTTCTGATTTCGGGGTGGGATAGGGAGTTAATT---TTTTCTGAATTGCTGACCTTCACCCCTgcctgcatgaccttgggcagtaagccccatctctgagcctcggtttcctcatttgGAGCCTGTTGTCATGAACCCCCCTCCTGAGCG-GTTCGGGGGCCAGTTGTGCCTGGGTCATGGGAGGGCCTCGGTCAT-GCACATTTCCAGACCGGGTTAAGACTTGAGGGGTGGACACATGTGTGGATCCTGGTGTTGGACTGTACAGTCATGGTGAGCGACTGATGTGCTCAACAGCCCACATCTGCTCCCAGCACTGGGAAAACCTGCTT-ATAATGTGTCTGAAATATGCAGCCACAGTCctacaaagaaaatgagaaatgaaacttCTTGTTATAGGCAGGAAACATTAAGAAGCAGAAGAGGTCAGAGCCGAGTGGCTGCTGGTGACTTGCGATGTCAGGCGGTCACTAAGGGGGAGGTTTCCACCTCTGTATGAGACAGAGGAGAAC------CCCCGGGCCCTCACACTCAGGGAGGGGTCATGGTTTTGGACGGAAGTAGGGAGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATGGCACTGGGGTATCTCTGCCCATTGACTCAGGTCCATGGTCACCCCTGAGCCGCCG-CCTCCA--TGTGTGCGAAACAGATTCACTACAGCGTTATCACACATGGGCGTCTGTCCCGCATGCGAGCCTGAGGCTCACGTTGGCCCCTCCCCTGCTGGTGACAGCCCTGAGCAGACTCGTGTGGCACTGGCGGGTGGAACCATCTCCCCTTTTCCAGCCTTAGCTCCCAGCACAGCCCTGGTAGAAACCCTCTCTGGAAGGTGAGGCATGTGGGAAGCATGTGTCCAAGAATGACAAGAAGGAGGAATTATCCTCACGATCAAAAGTGCTATGATAgaccgggcaccgtggctcatgcctgcagtc- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46954659 1333 + 50890351 CCCAGCCCTGGGGATGCTTCAGGGAAGCTGCAGGTCCCTGCTGCAGGGCAGACTCAGATCAGCAGAG--ACTCATCACACATCTGGCTGTGAACTTCAAGCTGAGCTGCAAATGACAATGAG---AAAAAAGGAGAAATAAAGAAATGCTGACTCTTC-TTTTGTCTTTGGAGTCTAGGTTTTATTTCTTCCAGTTTCC--TTCTTAGACTTCCCTC-----CTTTTTTTTTTTCTTA--TTTTTTAACAGTGTTCACCTCCCCCTCCCTTAAAAGTAACCTCTGAGTCATTCCTGCCTCCTCGGTGTCCCTCCCACCCCCAACCCCGCTTCCTTGGGCATTCCCCTGCATCTCAGTCTGCCTTCAAGGGTTTGGAAACAAGTACTTAGTCTTGAGTTCTGACATCGGGGTGGGATAGGGAGTTAATT---TTttctgaattgctgaccttcacccctgcctgcatgaccttgggcagtaagtcccatctctgagcctcggtttcctcatttgGGGCCTGTTGTCATGAACCCCCCTCCTGAGTG-GTTTGGGGGCCAGTTGTGCCTGGGTCATGGGAGGGCCTTGGTCATGGCACATTTCCAGACCGGGTTAAGACTTGAGGGGTAGACACATGCATGGATCCTGGTGTTGGACTGCACAGTCACAGTGAGCGACTGACGTGCTCAACAGCCCACATCTGCTCCCAACATTGGGAAAACCTGCTT-ATAATGTGTCTGAAATATGCAGCCACAGTCCTGCGAAGAAAATGAGAAATGAAACTTCTTGTTATAGGCAGGAAACCTTAAGAAGCGGAAGAGGTCAGGGCCGAGCGGCTGCTGGTGACTTGCAATGTCAGGCGGTCACTAAGGGGGAGGTTTCCACCTCTGTATGAGACAGAGGAGAAC------CCCTGGGCCCTCACACTCAGGGAGGGGTCATGGTTTTGGATGGAAGTGGGGAGTTGTGGCTCCTCCTCCCCTGTGTTTGTGGATGGCACTGGGGTATCTCTGCCCATTGACTCAGGTCCATGGTCACCCCTGAGCCGCCT-CCTCCA--TGTGTGCGAAACAGATTCACTGCAGCGTTATCACACATGGGCGTCTGTCCCACATGCGAGCCTGAGGCTCACATTGGACCCTCCCCTGCTGGTGACAGCCCTGAGCAGACTCGTGTGGCACTGGCGGGTGGCACCATCTCCCCTTTTCCAGCCTTAGCTCCCCGCACAGCCCTGGTAGAAACCCTCTCTGGAAGGTGAGGCATGTGGGAAGCATGTGTCCAAGAATGACAAGAAGGAGGAATTGTCCTCATGATCAAAAGTGCTATGATGggccgggcaccgtggctcatgcctgcagtc- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45509338 1341 + 49145316 TCCAGCCCTGGAGATGCTTCTGGGAAGTTGCAGATCCATGCTGCAGGGCAGAGTTGGATAAGCAGAGACACGTATCTCACATCTGGCTGTGAAATTCAAGTTGGGCTGCAGGTGGCAATGAG---AAAAAAGGAGAAATAAAGAAATGCTCACTCTTCTTTTTATCTTTGGAGCATGGGTTTTGTTTCTTTCAGTTTCCTTTTTTTATACTTCCCTC-------------CTCCGCCA--TTTTTTAATAGCGTTCACCTCCACCTCCCTTAAAAGTAACCTCTGAATCATTCCTGCCTTATCAGTGTCCGCCCTATCCCTAACACTGTTTCCTTGGGCATTCTCCTGCATCTCAGTCTGGATTAAAGGGTTTGGGAACAGGTACTTAGTCTTGAGCTTCGATTTTGTGGTGGGATAGGGAATCCGTTTTATTTtctgaattgctgaccttggtccctgcctgcatgaccttgggcagtaagtcccaactctgagcttcagtttcctcatttgCGGCCTGTTGTCATAAAC-CCCCTCCTGAGTGGTTTTGGGGGCCAGTTGTGCCTGGGTCATGGGAGGACCTCAGTTGTGGTACTTTTCCAGACCAGGTTAAGACCTGAGGGGTTGAAACATGAGTTGATCCTGCTGTTGGACTGCACAGTTGTGGTGAACAACTTATGTGCGCAACAGCCCACATCTGCTCCAAACACTGAGAAAAGCTACTTAACAAAGTTTCTGAAATATGTAGCCATGGTCCTATGAAG-AAATGAGAAATGAAACTTCCTGACACAGGCCGGAAACCTTAAGAAGCAGCAGAGGCCAGAGCTGAGTGGCTGCTGGTGACTTGCAATGTCAAGGGGTGACTAAGGGGGAAGTTTTGATCTCTGTGTGAGATAGAAGAGAGCCCCAGGCCCAGGGACCCCACAGACAGGAAAGTGTCAGGATTTCAAATGAAGGACAGAAGCGGTGGCTTCTCCTCCTCTGTGTTTGTGGATGGCACTGGAATACCTCTACTT-TTGACTCAGGTCTATGGTCAGACCTGAGCTGCCT-TCTCCATGTGTGTGTGAAACAGATTCACTGCAGCATTATCAGACATCAGTGTCTGTCCCACATGTGAGTCTGAGGCTCACATTGGACCCTCCCTTGCTAAGCAAAGCCCTGAGCGGACTCATGTGACACTGGCAGGTGGAACCATCTCCCCTTTTCAAGCTGTAACTCCCAGCACAGCCCTGGTAGAAATCCTGCCTGACAAATAAGGCCTGTTGGGGGCGAGTGTCTAAGAATGACAAGAAGGAGGAATCATCCTAATGATCAAAAGTGCTATGATTggccaggtgctgtggctcacacctgcacttt i calJac3.chr22 I 8 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T a score=249669.000000 s hg38.chr19_GL949753v2_alt 247923 111 + 796479 ccagcactttgggaggtcaaggcgggcgggtcacttgggcccaggagttcaagaccagcctgggcaacatggcaaaacctcatctctacaagaaatacaaaaattagctgg s panTro4.chr19 59188270 111 + 63644993 ccagcacttcgggaggtcaaggtgggcgggtcacttgggcccaggagttcaagaccagcctgggcaacatggcaaaacctcatctctacaagaaatacaaaaattggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4248661 111 - 60714840 ccagcactctgggaggtcaaggtgggcgggtcacttgggcccaggagttcaagaccagcctgggcaacatggcaaaacctcatctctacaaaaaatacaaaaattagctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102816723 111 - 106955855 ccagcacttcgggaggtcaaggcgggtgggtcacttggacccgggagttcaagaccagccttgacaacatggcaaaacctcatctctacaaaaaatacaaaaattagctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60126490 111 + 64156825 ccagcactttgggaggtcaaggcgggccggtcacttgggcccaggagttcaagaccagcctgggccacacagcaaaacctcttctctacaaaaaatacaaaaattagctgg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47240214 111 + 51301725 ccagcactttgggaggtcaaggcgggccggtcacttgggcccaggagttcaagaccagcctgggccacacagcaaaacctcatctctacaaaaaatacaaaaattagctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46955992 111 + 50890351 ccagcactttgggaggtcaaggcgggccggtcacttgggcccaggagttcaagaccagcctgggccacacagcaaaacctcttctctacaaaaaatacaaaaattagctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45510679 102 + 49145316 ccagcacttcgagacgtcaaggcaggcgggtcacttgaggccaggggttcaagaccagcctgggcaacatgacaaaacgtcatct---------gtaaaaaaATTAGCGGG i calJac3.chr22 C 0 I 28546 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e macFas5.chr19 55154705 22451 + 59248254 I a score=706177.000000 s hg38.chr19_GL949753v2_alt 248034 414 + 796479 atgtggtgTCATgaataatggcctccagctcatccaggttgctgcaaaactcaatcccttgtacatcagttgcaaaaaattaaaaatatctaagaatatacctaactgaggaggtgaaagatctctacaagaagaacaacaaaatgctgcagaaagaaatcgtagatgacacagcaaaatagaaatatatcccatgctcatggattggcagaatcaatattgtgaaaatgatcacacttcccaaagcaatatttaggttcaatgcaattcccatcaaaatatcaacatcatttttttcacagaattagaaaaa--aatcctaaaattcatatggaacc-aaaaagaggatgaataccaaagcaatcttaagcaaaaagacaaatGTAAATTTAATAAACATATcctaggctgaattg s panTro4.chr19 59188381 413 + 63644993 atgtggtgTCATgaataatgacctccagctcatccaggttgctgcaaaactcgatcccttgtacatcagttgc-aaaaattaaaaatatctaagaatatacctaaccgaggaggtgaaagatctctacaagaagaacaacaaaatgctgctgaaagaaatcgtagatgacacagcaaagtagaaatatatcccatgctcatggattggcagaatcaatattgtgaaaatgatcacacttcccaaagcaatatttaggttcaatgcaattcccatcaaaatatcaacatcatttttttcacagaattagaaaaa--aatcctaaaattcatatggaacc-aaaaagaggacgaataccaaagcaatcttaagcaaaaagacaaatGTAAATTTAATAAACAGATCCTAGGCTGAATTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4248772 416 - 60714840 atgtggCATCATgaataatggcctccagctcatccaagttgctgcaaaaCTCAAtcccttgtacaacagttgcaaaaaattaaaaatatctaagaatatacctaaccaaggaagtgaaatatctctacaagaagagcaacaaaacgctgctgaaagaaatcgtagatgacacagcaaaatagaaatatatcccatgctcatggattggaagaatcaatattgtgaaaatgatcatacttcccaaatcaatatttagattcaatgcaattcccatcaaaatatcaacatcatttttttcacagaattagaaaaaacaatcctaaaattcatatggaacc-aaaaagaggatgaataccaaagcaatcttaagcaaaaagacaaatgtaaatttaataaacatatcctaggctgaattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102816834 414 - 106955855 atgtggtgtcgtgaataatggcctccagctcatccaacttgctgcaaaactcaatcccttgtacaacagttgccaaaaattaaaaatatctaagaatatacttaaccaaggaggtg-aatatctctacaagaagaacaacaaaatgctgctgaaagaaatcgtagatgacacagcaaaatagaaatatatcccatgctcatggattggaagaatcaatattgtgaaaatgatcatactgcccaaagcaatcttcagcttcaatgcaattcccatcaaaataccaatatca--tttttcacagaattagaaaaaacaatcctaaaattcatatggaaccaaaaaagagcatgaataccaaagcaatcctaagaaaaagatcaaatGTAAATTTAATACACATATCCTAGGCTGAATTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60126601 415 + 64156825 atgtggtgTCATTaataatggcctccagctcatccaagttgctgcaaaaCTCAGtcccttgtacaactgttgcaaaaaattaaaaatacctaagcagatacctaaccaaggaggtgaaagatctctacaagaagaacaataaaacgctgctgaaagaaatcgtagatggcacagcaaaacagaaataaatcccatgctcatggattggaagaatcagtattgtgaaaatgatcatactgcccaaagcaatcttcatattcaatgcaattcccatcaaaatgccaatatca--tttttcacagaattagaaaaaacaatcctaaaattcatatggaaccaaaaaagagcatgaataccaagccaatcctaagaaaaagatcgaatgtaaatttaatacacatatcctaggctgaattg i rheMac3.chr19 C 0 I 4443 s papAnu2.chr19 47240325 413 + 51301725 atgtggtgtcatgaataatggcctccagctcatccaagttgctgcaaaactCAATCCCTTGTGCAACTgttgcaaaaaattaaaaatacctaagcagatacctaaccaaggaggtgaaagatctctacaagaagaacaGTAAAacgctgctgaaagaaattgtagatggCACcgcaaaacagaaataaatcccatgctcatggattggaagaatcaatattgtg-aaatgatcatactgcccaaagcaatcttcagattcaatgcaattcccatccaaatgccaatatca--tttttcacagaattagaaaaaacaatcctaaaattcatatggaacc-aaaaagagcatGAATACCGAACCAATCTTAAGAAAAAGATCAAATGTAAATTTAATACACATATCCTAGGCTGAATTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46956103 415 + 50890351 atgtggtgTCATgaataatggcctccagctcatccaagttgctgcaaaactcaatcccttgtacaactgttgcaaaaaattaaaaatacctaagcagatacctaaccaaggaggtgaaagatctctacaagaagaacaataaaacgctgctgaaagaaatcgtagatggcacagcaaaacagaaatatatcccacgctcatggattggaagaatcagtattgtgaaaatgatcatactgcccaaagcaatcttcagattcaatgcaattcccatcaaaatgccaatatca--tttttcacagaattagaaaaaacaatcctaaaattcatatggaaccaaaaaagagcatgaataccaaaccaatcctaagaaaaagatcgaatGTAAATTTAATACACATATCCTAGGCTGAATTG i chlSab2.chr6 C 0 I 4421 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45510781 28546 + 49145316 I e macFas5.chr19 55154705 22451 + 59248254 I a score=4041.000000 s hg38.chr19_GL949753v2_alt 248448 16 + 796479 tagggggttt----gttttt------- s panTro4.chr19 59188794 16 + 63644993 TGGGGGGTTT----GTTTTT------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4249188 15 - 60714840 t-gggggttt----gttttt------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102817248 16 - 106955855 TGGGGttttt----attttt------- i nomLeu3.chr10 C 0 I 32 s papAnu2.chr19 47240738 26 + 51301725 -Cggggctttttaaattttttcttttt i papAnu2.chr19 C 0 I 4299 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45510781 28546 + 49145316 I e chlSab2.chr6 46956518 4421 + 50890351 I e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 60127016 4443 + 64156825 I a score=2910.000000 s hg38.chr19_GL949753v2_alt 248464 3 + 796479 gct s panTro4.chr19 59188810 3 + 63644993 gct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4249203 3 - 60714840 gct i ponAbe2.chr19 C 0 I 5157 s nomLeu3.chr10 102817296 3 - 106955855 gct i nomLeu3.chr10 I 32 I 25 s papAnu2.chr19 47245063 3 + 51301725 gct i papAnu2.chr19 I 4299 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e calJac3.chr22 45510781 28546 + 49145316 I e chlSab2.chr6 46956518 4421 + 50890351 I e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 60127016 4443 + 64156825 I a score=11167.000000 s hg38.chr19_GL949753v2_alt 248467 28 + 796479 cacttcaacctccacctcccgggttcat s panTro4.chr19 59188813 28 + 63644993 cacttcaacctccacctcccgggttcat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102817324 28 - 106955855 cactgcaacctccgcctcctgggttcaa i nomLeu3.chr10 I 25 C 0 s papAnu2.chr19 47245066 27 + 51301725 cactgcaaactccacctcctgggatca- i papAnu2.chr19 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e chlSab2.chr6 46956518 4421 + 50890351 I e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 60127016 4443 + 64156825 I a score=880.000000 s hg38.chr19_GL949753v2_alt 248495 7 + 796479 tcaagtg s panTro4.chr19 59188841 7 + 63644993 tcaagtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102817352 4 - 106955855 gcaa--- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47245093 4 + 51301725 ---aatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46960939 7 + 50890351 tcaaatg i chlSab2.chr6 I 4421 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 60127016 4443 + 64156825 I a score=62490.000000 s hg38.chr19_GL949753v2_alt 248502 60 + 796479 atcctcctgcctctgcctcccaagtagctgggattgca-gcgtgcgccaccatgtccagct s panTro4.chr19 59188848 60 + 63644993 atcctcctgcctctgcctcccaagtagctgggactgca-gtgtgcgccaccatgtccagct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102817356 57 - 106955855 ----ttctgtctcagcctcctgagtagctgggattacaggtgtgcaacaccacgcctggct i nomLeu3.chr10 C 0 I 2530 s rheMac3.chr19 60131459 61 + 64156825 atcctccttcctcagcctcccaagtagctgagactacaggcgttagccaccatgtctggct i rheMac3.chr19 I 4443 C 0 s papAnu2.chr19 47245097 60 + 51301725 attctcctgcctctgcctccccagtagctgggattgca-gcgtgcgccaccatgtctggct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46960946 60 + 50890351 attctcctgcctctgcctccccagtagctgggattgca-gtgtgcgccaccatgtctggct i chlSab2.chr6 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e macFas5.chr19 55154705 22451 + 59248254 I a score=156203.000000 s hg38.chr19_GL949753v2_alt 248562 180 + 796479 aatttttgtatttttagt-agagatggggttttgccttgttggccatgctggtcttgaactcccggcctcaagtaatctgtggcctctgcctccctaggtgttgagattacaggcgtgagccaccgcacccggGCACAttgcctctttttctattctcaagaaacatttgtgatgctctgg s panTro4.chr19 59188908 180 + 63644993 aatttttgtatttttagt-agagatggggttttgccttgttggccaggctggtcttgaactcccggcctcaagtaatctgccgcctctgcctccctagatgttgagattacaggcgtgagccagcgcacccggGCACAttgcctctttttctattctcaagaaacatttgtgatgctctgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60131520 181 + 64156825 aatttttgtatttttagtaagagatggggttttaccatgttggccaggctggtcttgaactcccggcctcaagtaatctgccgcctctgcctccctatgtgttgagatttcaggcgtgagccaccgcacccagGCACAttgcctctttttctattctcaagaaacatttgtgacgctctgg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245157 181 + 51301725 aatttttgtatttttagtaagagatggggttttaccacgttggccaggctggtcttgaactcccggcctcgaGTAATctgccgcctctgcctccctatgTGTtgagatttcaggcgtgagccaccgcacccaggtacattgcctctttttctattctcaaGAAACATTTGTGATGCTCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961006 181 + 50890351 aatttttgtatttttagtaagagatggtgttttaccatgtcggccaggctggtcttgaactcccggcctcaagtaatctgccgcttctgcctccctatgtgttgagatttcaggcgtgagccaccgcacccagGCACATTGCCTCTTTTTCTATTCTCAAGAAACATTTGTGACGCTCTGG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19722729 22550 - 122678785 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e nomLeu3.chr10 102817413 2530 - 106955855 I e macFas5.chr19 55154705 22451 + 59248254 I a score=96226.000000 s hg38.chr19_GL949753v2_alt 248742 120 + 796479 gtgtgtttgtgtgtttcattagtgcgtcaatatttgt-aagaaatcaccagtgaaacttcctgaactggagttgatacgatgggaacatttttatt---acagtcaatgttttt---cacacacaca s panTro4.chr19 59189088 120 + 63644993 gtgtgtttgtgtgtttcattagtgcgtcaatatttgt-aagaaatcaccagtgaaacttcctgaactggagatgatacaatgggaacatttttatt---acagtcaatgttttt---cacacacaca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60131701 109 + 64156825 gtgtgtttgtgcatttcattagtgtgtcaatatttgtaaaaaaatcaccaatgaagcttcgtgaactggagtttataccatgggaacatttttatt-----agtcagtatattt------------- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245338 117 + 51301725 GTGTGTTTGTGCGTTTCATTAGTGTGTCAATATTTGT-AAAAAATCACCAATGAAGCTTTGTGAACTGGAGTTTATACCATGCGAACATTTTTATT-----AGTCAGTAtattt---ctcacacac- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961187 119 + 50890351 GTGTGTTTGTGCATTTCATTAGTGTGTCAATATTTGTAAAAAAATCACCAATGAAGCTTCGTGAACTGGAGTTTATACCATGGGAACATTTTTATT-----AGTCAGTATATTT---cacatacaca i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19700179 123 - 122678785 gtgtgtgtgtatatTTCATGAGTGCATCagtatttgg-aggcattcaccagtggagttttctagact-cagttcactttgtcagaaaaactttaattacatattcaccatgtttttatacataca-- i canFam3.chr1 T 22550 I 74 e mm10.chr7 3869443 29455 + 145441459 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e nomLeu3.chr10 102817413 2530 - 106955855 I e macFas5.chr19 55154705 22451 + 59248254 I a score=24842.000000 s hg38.chr19_GL949753v2_alt 248862 55 + 796479 cacacacacacacacacatatatatacacacacatacacacacatttaaaatgag s panTro4.chr19 59189208 55 + 63644993 cacacacacacacacatatatatatacacacacatacacacacatctaaaatgag i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60131810 29 + 64156825 --------------------------cacacacacacacacacatctaaaatgag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245455 30 + 51301725 -------------------------acacacacacacacacacatctaaaaTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961306 45 + 50890351 cacatac----------atatatatacacacacacacacacacaTCTAAAATGAG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e canFam3.chr1 19700302 74 - 122678785 I e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e nomLeu3.chr10 102817413 2530 - 106955855 I e macFas5.chr19 55154705 22451 + 59248254 I a score=51176.000000 s hg38.chr19_GL949753v2_alt 248917 60 + 796479 tcagattctctgattactctta--cgttcattatgtaaactccagttttgaatatttcatcc s panTro4.chr19 59189263 60 + 63644993 tcagattctctgattactctta--cgttcattatgtaaactccagttttgaatatttcatct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60131839 60 + 64156825 tcagattcgctgatcactctta--cgttcattaagtaaactccagttttgaatatttcattt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245485 60 + 51301725 TCAGATTCTCTGATTACTCTTA--CGTTCATTAAGTAAACTCCAGTTTGGAATATTTCATCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961351 60 + 50890351 tcagattctttgattactctta--cgttcattaagtaaactccagtttggaatatttcatct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19700376 59 - 122678785 ttaaaatttttttttatttttaatttttaattatttattttttggtaacgtatatttct--- i canFam3.chr1 I 74 C 0 e mm10.chr7 3869443 29455 + 145441459 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e nomLeu3.chr10 102817413 2530 - 106955855 I e macFas5.chr19 55154705 22451 + 59248254 I a score=300985.000000 s hg38.chr19_GL949753v2_alt 248977 239 + 796479 atttaatctgcattttctagtatattggtataggtttg------------cagcc--------------------tgttctggggttagtttgtgaaaatgtgtgtaggatctgctgggctgtctgctggctcactcccat-atggaaatgcgtgcctgctctttcttt--ctcttgctcaatgtagttaggatttatgactgtaattaatattttcaagaatgagcttcattggctttgttgaattttcaag-ttttggtttttcctcatgagc s panTro4.chr19 59189323 240 + 63644993 atttaatctgcattttctagtatattggcataggtttg------------cagcc--------------------tgttctggggttagtttgtgaaaatgtgtgtaggatctgctgggctgtctgctggctcactcccat-atggaaatgcgtgcctgctctttcttt--ctcttgctcaatgtagttaggatttatgactgtaattaatattttcaagaatgagcttcattggctttgttgaattttcaagtttttggtttttcctcgttagc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102819943 221 - 106955855 atttaatctgcattttctagtatattggcataggtttg------------cagcc--------------------tgttctggggttagtttgtgaaaatgtgtgtaggatctgct------tct------tcactcccat-atggaaacgcgtgcctgctctttcttt--------ctcagtctagttaggattcatgagtataattaatattttcaagaatgagcttcactggctatgttgaattttcaag-ttttggtttttcctcatgagc i nomLeu3.chr10 I 2530 C 0 s rheMac3.chr19 60131899 239 + 64156825 atttaatctgcattttctagtatattggcataggtttg------------caccc--------------------tgttctgttgttagtttttgaaaatgtgtgtagggtctgccgggctgtctgcttcttcgcgcccac-atggaaatgcgtgcctgctctttcttt--ttcttgctcaatgtagttaggatttatgagtgtaattaatattttcaagaatcagcttcactggctttgtggaattttcatg-ttttggtgtttcctcatgagc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245545 237 + 51301725 ATTTAATCTGCATTTTCTGGTATATTGGCATAGGTTTG------------CACCC--------------------TGTTCTGAGGTTAGTTTTTGAAAATGTGTGTAGGATCTGCTGGGCTGTCTGCTTCTTCACGCCCAC-ATGGAAATGCGTGcctgctctttcttt--ttcttgctcaaTGTAGTTAGGATT--TGAGTGTAATTAGTATTTTCAAGAATGAGCTTCACTGGCTTTGTTGAATTTTCAAG-TTTTGGTTTTTCCTCATGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961411 239 + 50890351 atttaatctgcattttctagtatattggcgtaggtttg------------ccgcc--------------------tgttctgttgttagtttttgaaaatgtgtgtagggtctgccgggctgtctgcttcttcgcgcccac-atggaaatgcgtgcctgccctttcttt--ttcttgctcagtgtagttaggatttatgagtgtaattaatattttcaagaacgagcttcactggctttgtggaattttcacg-ttttggtgtttcctcatgagc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19700435 255 - 122678785 gtttcatctacattttctaatattttgtcataaaattgttcataatataacaaccaataacaaatgaacataatacattctgttattgattt-----aaagtctgtag-----gctgagatg---------ccatactgataatggtgatgtaagccttctttctctatgttccttgggtgttgtagctaggatttatacatgtgattaatatttgcaaaaatgaaggtt-ttagatttattgattcttctctatttttgtttgtcctcattagt i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e ponAbe2.chr19 4249206 5157 - 60714840 I e calJac3.chr22 45510781 28546 + 49145316 I e macFas5.chr19 55154705 22451 + 59248254 I a score=135677.000000 s hg38.chr19_GL949753v2_alt 249216 77 + 796479 aact---cttcttct-----tcttattccctttcttacaccttcatttggaataattggttattcttt-ttctaaattccttatac s panTro4.chr19 59189563 74 + 63644993 aac------tcttct-----tcttattccctttcttacaccttcatttggaataattgcttattcttt-ttctaaattccttatac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102820164 77 - 106955855 aact---cttcttct-----tattattccctttcttacaccttcatttggaataatttgttattcttt-ttctaaattccttatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60132138 80 + 64156825 aactctgctttttct-----tattattccctttctcacaccttcatttgggataatttgttattcttt-ttctaaattcctgatac i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47245782 80 + 51301725 AACTctgctttttct-----tattattccCTTTCTCACACCTTcatttgggataatttgttattcCCT-TTCTAAATTCCTGATAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961650 80 + 50890351 aactctgctttttct-----tattattccctttctcacaccttcatttgggataatttgttattcttt-ttctaaattcctgacac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539327 74 + 49145316 aact---cctgttgt-----tattattcccttccttacaccttcatttggaataat---ttattcttc-ttctaaattcctgattt i calJac3.chr22 I 28546 C 0 s canFam3.chr1 19700690 81 - 122678785 -----agcttcttgtatcactataatttccctcctcttaccttcatttggaataatttgctattttttcccctaaattcttggtat i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e ponAbe2.chr19 4249206 5157 - 60714840 I e macFas5.chr19 55154705 22451 + 59248254 I a score=979663.000000 s hg38.chr19_GL949753v2_alt 249293 470 + 796479 gaaagccaacgtcattcatttcctag------------tttttttttttcgtttctacttttttcatttgtggtttgtactttttcaatttcatt-gtgtgatgtgtaatatttatattgtgattcagtttaaagcacattcttacttctgattttagttttctcggttaactcattgattattgagaagtctgttgctttaattaaaa-aatgtagggatattagttat-ttCGACTGCAG-AATCAAGTGAGTCCC-AAAGTTCCCAGCATCTCCTCATGGTCTTTGTTAGGGGTCCAGGCTGACTGGGGTTCATTGGTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCT-GAGTCTCCTTCTACTGAGTGTGGAGTCTGCGTACCCTCCGGGCTAGTGGATGGCCAGGGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTTCCGTCT s panTro4.chr19 59189637 473 + 63644993 gaaagccaacgtcattcatttcctagtt---------ttttttttttttcttttctacttttttcatttgtggtttgtagtttttcaatttcatt-gtgtgatgtgtaatatttatattgtgattcagtttaaagcacattcttacttctgattttagttttctcagttaactcatcgattattgagaagtctgttgctttaattaaaa-aatgtagggatattagttat-ttCGACCGCAG-AAGCAAGTGAGTCCC-AAAGTTCCCAGCATCTCCTCATGGTCTTTGTTAGGGGTCCAGGCTGGCTGGGGTTCACTGGTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCCT-GAGTCTCCTTCTACTGAGTGTGGAGTCTGCCTACCCTCCGGGCTAGTGGATGGCCAGGGTGGCGTAGATGCTGGGCTCAGCTGGAGAGGGCCCTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4254363 439 - 60714840 gaaagccaaggtcattcatttcctac---------------tttttttccttttctaattcattcatttgtggcttgtagttttccaatttcatc-gtttgatgtgtaatatttacattgtgattcagtttaatgcactttctgac------ttttagtttcctcagctacttcattgattattgagaagtctgttgctttatttcaaa-aatgtagacatattagttat-ttATACTGCAG-AATTGAGTGACCCCTAAAAGTTCCCAGAGTCTCC----------TGGCATAGATCCAGGCTGACTGGGGTTCAATGGTGTCCACTGGGGGCAGCTCCCATGCATTC--CAGAC------------TCCATGGAGTGTGGAGTCTGGGTGCCCCCTGGGCTAGTGGATGGCCAGAGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCGTTCCTGGGATGGAGGAGGCTCAGTTGCCTCCCGTCT i ponAbe2.chr19 I 5157 C 0 s nomLeu3.chr10 102820241 471 - 106955855 aaaagccaacatcattcacttcctag-----------ttttttttttttcttttctacttttttcatttctggtttgtagtttttcaatttcatt-gtgtgatgtgtaatatttatattgtgattcagtttaaagtacattcttacttctgattttagttttctcagttaactcattgattgttgagaagcctgtttctttaattagaa-aatgtagggatattagttat-ttAGACTGCAG-AATCAACTGAGTCCC-AAAGTTCCCAGAATCTCTCGGTGGTCTTTCTTAGGGGTCCAGGCTGACTGGGGTTCATTGGTGTCCACTGGGGGCAGTTCCCGTGCCTTCAGCAGTCCT-GAGTCTCCTTCTCCTGAGTGTGGGGTCTGGGTCCCCTCTGGGCTAGTGGATGGCAAGCGTGGCGTAGATGCTGGGCTCAGCTGGAGGTTCCCCTTCCTGGGATGGAGGAAGCTCAGTTGCCGTCCGTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60132218 455 + 64156825 gaaagccaacgtcgttcatttcctagtgttttgttttgttttgttttttcttttctacttttttcatttgtggtttgtagtttttccatttcatt-gtgtggtgtgtaatatttatattgtgattcagtttcaagcacattcttacttctgattttagttttctcagttaactcattgattattgagaagtctgttg-tttaatttaaa-aatgtagggatattagttat-ttAGACTACAG-AATCAAGCGATTCCC-AAAGTTCCCAG-----------------------AGGTCCAGGCTGACTGAGGTTCATTGCTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCGGTCCC-GAG---CCTCCTGCTGAGTGTGGGGTCTGGGTCCCCTCCAGGTTAGTGGATGGCCAGAGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCTTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCt i rheMac3.chr19 C 0 I 26022 s papAnu2.chr19 47245862 427 + 51301725 GAAAGCCAACGTCATTCATTTCCTAGTG--------------Gttttt------------------tttGTGGTTTGcagtttttccatttcatt-gtgtGGTGTGTAATATTTATATTGTGATTTAGTTTCAAGCACATTCTTACTTCTGATTTTAGTTTTCTCAGTTAACTCGTTGATTATTGAGAAGTctgttg-tttaatttaaa-aatgtagggATATTAGTTAT-TTAGACTGCAG-AATCAAGCGATTCCC-AAAGTTCCCAG-----------------------AGGTCCAGGCTGACTGGGGTTCACTGGTGTCCACTGGGGGCAGCTCCCGTGCCTTCTGGAGTCCCTGAGTCTCCTTCTGTTGAGTGTGGGGTCTGGGTCCCCTCCGGGTTAGTGGATGGCCAGGGTGGCGTAGACGCTGGGCTCAGCTGGAGGTTCCCTTTCCTGGGTTGGAGGAGGCTCAGTTGCCTCCCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46961730 452 + 50890351 gaaagccaacgtcgttcatttcctagtg------tgtttttttttttttcttttctacttttttcatttgtggtttgtagtttttccatttcatt-gtgtggtgtgtaatatttatattgtgattcacgttcaagcacattcttacttctgattttagttttctcagttaactcattgattattgagaagtctgctgctttaattaaaa-aatgtagggatattagttat-ttAGAATGCAG-AATCAAGCGATTCCC-AAAGTTCCCAG-----------------------AGGTCTAGGCTGACAGGGGTTCATTGGTGTCCACTGGGGGCAGCTCCCGTGCCTTCAGCAGTCC--GAGTCTCCTTCTGCTGAGTGTGGGGTCTGGGTCCCCTCCGGGCTAGTGGATGGCCAGGGTGGCATAGACGCTGGGCTCAGCTGGAGGTTCCCTTTGCTGGGTTGGAGGAGGCTCAGCTGCCTCCCGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45539401 462 + 49145316 gaaagccaagatcattcatttcctag---------------gtttttttctcttctactttattcggttgtggtttttagtcttccaatttcatt----tcgtgtgtaatatttatattgtga-caagtttaaagcacattctgacttctg-ttttagttttctcaattaactcattaattattgagaagtctgttgctttaactaaaa-aatgtagagatattagttat-ttAGACTGCAGAAATCAAGTGAGTCCC-AACATCTCCAGAATGTCCTGGTGGTCTGTGTTAGGGGTCCAGGCTGGCTGGGGTTCATTGGTGTCCACTGGGGGCAGCTTACGTGCCTTCTGGAGTCCCTGAGTCTCCTTTCGTT--GTGTGGGGTCTGGGTCCTTCGTAGGCTAGTGGATGGCCAGAGTGGAGTAGACACTGGGCTCAGCTGGAGGGGCCCCTTCCTGGAATGAAGGGGGCTCAGTTGCCTTCCGACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19700771 408 - 122678785 gatagcttgggtcattgatt--------------------------------------------------tggttcttaattttcccatttcataggtttgatgtgtaacatttacattatccctccgtgtaaa-cattgtctcatttcca-ttttggttttctcattaaattcctggattattgagaagtccactgctttaatttccatagtgtagggatattagctatctttGAGGGCAG-AATTGGGTGACTTGCAAAGGGTCCCAGGAGTTACTAGTGGTCTGTGTGAGGAGTCCAGGCTGGCTGG-------TAGCACCCACTATGGGCAGGTCCTGTGCCTTCCTTGGGTCC--------------------GTGGGGTCTGGGTCCTTCCTGGGCTAGTGAATGGCCAGAGCAGCATACACGCTGGGCTCTGCTGGGGGCTCCCCTGACTGGGAGGGAGAGGATGCACTTGTCTTCTGTCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=386306.000000 s hg38.chr19_GL949753v2_alt 249763 137 + 796479 GAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGCGGG---AGAGAGTGAGAGGTAAGGAACGTGGTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTC s panTro4.chr19 59190110 137 + 63644993 GAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGAGGCTTCAGATGCAGCAGCCTGCAATGGG---GGAGAGTGAGAGTGAAGGAACGTGGTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTC i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 4254802 137 - 60714840 GAGGGTCAAGCTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGG---GGAGAGTGAGAGGGAAGGAACGTGGTGG-GGGTCGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACCC i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 102820712 137 - 106955855 GAGGGTCAAGCTGTGCAGCTGGGCATAGGTCACATCCTGGGGGGCTTCAGATGCAGCAGCCTGCAGTGGG---GGAGAGTGAGAGGGAAGGAACGTGATGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACTC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 3722508 136 - 64156825 GAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGTAGTGGG---GGAGAGTGAGAGGGAAGGAACGTGGTGG-GGGTGGGGGAGGCCTGGGGGCCTGGAGAGGAAAGGACT- i rheMac3.chr19 n 26022 C 0 s papAnu2.chr19 47246289 137 + 51301725 GAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAgtggg---ggagagtgagagggaaggagcgtggtgg-gggtgggggaggcctgggggcctggagaggaaaggaCTC i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46962182 137 + 50890351 CAGGGTCAAGCTCTGCAGCTGGGCGTAGGTCACATCCTGGGGGTCTTCAGATGCAGCAGCCTGCAGTGGG---GAAGAGTGAGAGAGAAGGAACATGGTGG-GGGTGGGGGAGGCATGGGGGCCTGGAGAGGAAAGGACTC i chlSab2.chr6 C 0 I 1728 s calJac3.chr22 45539863 141 + 49145316 GAGGGTCAAGGTGTCCAGCTGGGCGTAGGTCACTTCCTGGGGGGTTTCAGATGCAGCAGCCTGCAGTGGGGGCGGAGAGTGAGAGGGAAGGAACATGCTGGAAGGTGGGTGAGGCCTGGGGGCCTGGAGAGGAAAGTATCT i calJac3.chr22 C 0 I 1 s canFam3.chr1 19701179 137 - 122678785 GAGGGTCAAGTGGTTCAGCTGAGCGTAGGTCACATCTGGGGGGGCGTCAGATGCAGCAGCCTGCAGCAGG---GGAGAGTGAGAGGGGAGGTTGGTGTTGG-GGTGGGGGGAAGCCAGGGTGATCAGAGAAGACAGGGCCC i canFam3.chr1 C 0 I 1 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=476692.000000 s hg38.chr19_GL949753v2_alt 249900 186 + 796479 TCTCAGtgtccatctgtctgtcctcttctgcctgtctgtcctttgtgtcCAGGAATTCCCCGGACAGTGGGGAGGGAGGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCTCGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGGG---TG-- s panTro4.chr19 59190248 186 + 63644993 CCTCAGTGTCCATCTGCCTGTCCTCTTCCGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGACGAGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCGCCGGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGGG---TG-- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 4254940 186 - 60714840 CCTCAGTGTCCATCTGCCTGTCCTCTTCTGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACGGGGGCATGCGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGGG---TG-- i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 102820850 186 - 106955855 CCTCAGTGTCCATCTGCCTGTCCTCTTCTGCCTGTGTGTCCTTTGTGTCCAGGAATTCCCCGGACAGTGGGGAGGGAGGGGAGGCCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCGGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAGAGACAGTGGTGGGGGG---TG-- i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 3722644 176 - 64156825 ----------CAGCTGCCTGTCCTCTTCCGCCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGGGAGGGGAGGTCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCCAGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGCCTCTGCTGGAGAAAGACACTGGTGTGGGG---TG-- i rheMac3.chr19 C 0 I 1 s papAnu2.chr19 47246427 186 + 51301725 CCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTGTGTGTCCTTTGTGTCCAGGAATTCCTCGGACAGTGCGGAGAGAGGAGAGGCCATTTCTCTCCTAGGTCCGGAGAGTT------TCACCTGGGCGTATGTCACTGTCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGGGG---TG-- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46964047 186 + 50890351 CCTCAGTGTCCATCTGCCTGTCCTCTTCCACCTGTGCATCCTTTGTGTCCAGGAATTCCTCGGACAGTGGGGAGAGAGGAGAGGTCATTTCTCTCCTAGGTCTGGAGTGTT------TCACCTGGGCATACGTCACTGCCTGGGGGTCTTCATCGTGTGGGCTCTGCTGGAGAAAGACACTGGTGGGGgg---tg-- i chlSab2.chr6 I 1728 C 0 s calJac3.chr22 45540005 186 + 49145316 CCTGACTGTCCATCTGCCTGTCCTCTTCTGCCTGTTTGTGCTATGTGTCCAGGAATTTCCTGGACAGGGGGGAAGCAGGGGAGGCCATTTCTCTCTTAGGTCTGGAATGTT------TCACCTCAGCATAGGTCTTCGCCTGGGGGTCTTCATCATATGGGCTCTGCTCGAGACAGACAGTGGTGGGAGG---TG-- i calJac3.chr22 I 1 C 0 s canFam3.chr1 19701317 197 - 122678785 CCTGACTGTCCATCCACCTATCTTCCTCTGCTTGTCTGTCCTCTGAGTCCTGTAATCCTCCTGAAAGGGAGGAAGGAGGAGTGGCCAGGACCTGCCTGGGACTTGATCATTAGTAGCTCACCTGGGCGTACATGTCTCCATGGGGTTCTTCATCCTGTGTGTTCTTCTGCAGACAGACAGTGAGGGGGAGGTTTgtc i canFam3.chr1 I 1 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=38132.000000 s hg38.chr19_GL949753v2_alt 250086 18 + 796479 TCCTTGAGTCCCCCTGAC s panTro4.chr19 59190434 18 + 63644993 TCCTTGAATCCCCCTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4255126 18 - 60714840 TCCTTGAATCCCCCTGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102821036 18 - 106955855 TCCTTGAGTCCCCCTGAC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47246613 18 + 51301725 TCCTTGAGTCTCTCTGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46964233 18 + 50890351 tccttgagtccccctgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540191 18 + 49145316 TCCTTGAGTCCCCCTGAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19701514 18 - 122678785 tccttgaattcactccat i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3722820 1 - 64156825 I a score=75905.000000 s hg38.chr19_GL949753v2_alt 250104 29 + 796479 CTCCTGGAGTCAATTTTCCTCACTGTTCC s panTro4.chr19 59190452 29 + 63644993 CTCCTGGAGTCAATTTTCCTCACTGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4255144 29 - 60714840 CTCCTGGAGTCAATTTTCCTCACTGTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102821054 29 - 106955855 CCCCTGGAGTCAATTTTCCTCACTGTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3722821 29 - 64156825 CTCCTGGAGTCAATTTTCCTCACTGTTCC i rheMac3.chr19 I 1 T 38990 s papAnu2.chr19 47246631 29 + 51301725 CCCCTGGAGTCAATTTTCTTCACTGTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46964251 29 + 50890351 cccctggagtcaattttccccactgttcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45540209 28 + 49145316 CTCCTCGAGTCAGTTTTCC-CACTGTTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19701532 28 - 122678785 -cacttcagtcaatttgccacactgtggc i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=254601.000000 s hg38.chr19_GL949753v2_alt 250133 140 + 796479 CGGGGTGATCC-----------------GATTACATCCCTTTCCCGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggccgctcccttcctgtggttctggcctctgctcctcactctg-accttgcccatttggctgcagcctcatg-gg s panTro4.chr19 59190481 139 + 63644993 CGGGGTGATCC-----------------GATTACATCCCTTTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctgctcctcactctg-accttgccca-ttggctgcagcctcacg-gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4255173 141 - 60714840 CAGAGTGATCC-----------------GATTACATCCGTTTCCTGATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcccctcctcctcactgtg-accttgcccatttggctgcagcctcacgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102821083 141 - 106955855 CAGGGTGATCC-----------------GATTGCATCCCTTTCCTCATGGAATCT-CAGGGACGCCCTAAGGCCGTGGAGggtctggccgctccctccctgtggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctcacacgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47246660 140 + 51301725 CAGGATGATTC-----------------GATTACATCCCTTTCCTGATGGAATCT-CAGGGATGCCCTAAGGCCGTGGAGAGTCTGGCCGCTCCCTCCCTGTGGTTCTGGCCTCTCCTCCTCACTCTG-ACCTTGCCCATTTGGCTGCAGCCTCACACG- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46964280 139 + 50890351 cagggtgatcc-----------------gattaTATCCCTTTCCTGATGGAATCT-cagggat-ccctaaggccgtggagggtctggccgctccctccctgtggttctggcctctcctcctcactctg-accttgcccatttggctgaagcctcacgcc- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45540237 140 + 49145316 CTGAGTGATCC-----------------CATTACATCCCTTTCCTGATGGAATCT-CAGGG-CGCCCTAAGGCTGTGGAGggtctggctactcccttcctgcggttctggcctctcctcctcactctg-accttgcccatttggctgcagcctcacgccc i calJac3.chr22 C 0 I 1 s canFam3.chr1 19701560 156 - 122678785 cagagtgatgctttcaaactttcaggcagattaggtcactttcctgctggactctgcagggacttcctga-gccttgaagcatgtga-tgttttctttctatggctctgg-ttctattcctgacactgtttcttgcccatttgccaccagccatatgac- i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3722850 38990 - 64156825 T a score=2389439.000000 s hg38.chr19_GL949753v2_alt 250273 1033 + 796479 ---ccttcccgcaagagctcgctgctgcctcggggcctttgcacggctgtttcctctgcctgcaggggctcgtccattagaggatcgtgtgccccactctgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctgccctttccctggtgtatgttccttt-aagcacgttgcactcctggacatggcgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccatggggagcctgatccacagtgagctccctgggaacactcactggttgaatgaatgaaGGGGAGCCCAGGGGACCG-GGGTGGTTCATTTATTCCT-CATCCTCCAGAGGCCTGGGGA-GCGCTCTAACAACCAGACGGCCAAACAGAGGATGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCACGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGG--GGTCCA-CCGTGACGATGCTGAGAGCCGGGGGAAGGAGGACAGAGAAGTCC-TGCTGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCTGGGACAGGGGCGGGGTCTCACCCGAGTGTCCATCTCCACCCCATCTTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCTTGGGAAGGTTCCCTGGGACCTCTGAGTCCTGCCAGCCCCTGCCCTGCTCCCAGATGGGGCTACTGAGATGCAGGGA----GGGGCTGCAAT--GTCCCTGAGGTCCCACAGTGTGGGGTGAGATGATCTCACCCTGAGCCCCAGACCCTTTCCAGCCGGTGCCCCTTTCCCCATTGCTACGGAAACTTCGGGGCCCCTATCTCC-----------------------------------------------------CTCCTGGCTGG--TCACCTCTTCCTCTCACTCACAGAGGTTTTCTTCCTGGGCGTCGGCAGCTGGGCTGGACCTGGGGGAGGA s panTro4.chr19 59190620 1032 + 63644993 ---ccttcctgcaagagctcgctgctgcctcggggcctttgcacggttgtttcctctgcctgcaggggctcgtccattagaggatcgtgtggccccctccatccaggtttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctgccctttccctggtttatgttcctta-cagcacgttgcactcctggacacactgca-ttcatttgcattttgtctccca-ccatgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccacggggagccccatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACCG-GGGTGGTTCATTTATTCCT-CATCCTCctgaggcctgggga-gcgctctaacaaccagagggccaaacagaggatgaggagcaggaa-gggacccgggaggaggcccacgaggtcccaggacaccaggagagagtgaggtcgcagcaggcgggaggcagcatgctggacaaggagg--ggtcca-ccgtgatgatgctgagagccgggggaaagaggacagagaagtcc-tgcaggattagatctggcaccaggaggcctttggtgcccgggacgggggcagGGTCTCACCTGAGTGTCCATCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCTTGGGAAGGTTCCCTGGGACCTCTGAGTCCTGCCAGCCCCTGCTCAGCTCCCAGATGGGGCCACTGAGATGCAGGGA----GGGGCTGCAAT--GTCCCTGAGGTCCCACAGTGTGGGGTGAGATCATCTCACCCTGAGCCCCAAACCCTTTCCAGCCGGTGCCCCTTTCTCCATTGCTACGGAAACTTCGGGGCCCCCATCTCC-----------------------------------------------------CTCCTGGCTGG--TCACCTCTTCCTCTCACTCACAGAGGTTTTCTTCCTGGGCATCGGCAGCTGGCCTGGACCTGGGGGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4255314 1032 - 60714840 ---ccttcctgcaagagctcgctgctgcctcagggcctttgcacggctgtttcctctgcctgtaggggcttgtccattagaggatcatgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctccccttc-cattcagactggccccactgccccacactctctgccctttccctggtttatgttcctta-cagcacgttgcactcctggacacggcgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctttgctccctgctgtgtctgcagctcccacggggagcccgatccacagtgagttccc-gggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACCA-AGGTGGTTCATTTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACAACCAGAGGGCCAAACAGAGGATGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCACGAGGTCCCAGGACACCAGGAGAGAGTGACGTCACAGCAGGCAGGAGGCAGCGTGCTGGACAAGGAGG--GGTCCA-CCGTGACGATGCTGAGAGCCGGGGGAAGGAGGACAGAGAAGTCC-TTCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGTCTCACCCGAGTGTCCAGCTCCACCCCATCCTCAGGCTGTGTGTCCTTCACGGTAGCATCTGCTGGGGCAGAGCAAGGGGTTCATCTCCTGGGAAGGTTCCCTGGGACCTCTCAGCCCCGCCAGCCCCTGCCCAGCTCCCAGATGGGGCCACTGAGATGCAGGGA----GGGGCTGCGAT--GTCCCCGAGGTCCCACAGTGTGGGGTGAGATCATCTCACCCTGAGCCCCAGACCCTTTCCAGGCGGCGCCCCTTTCCCCATTGCTACGGAAACTTCGGGGCCCCCATCTCC-----------------------------------------------------CTCCTGGCTGG--TCACCTCTTCCTCTCACTCACAGGGGTTTTCTTCCTGGGCGTCGGCAGCGGGGCTGGACCTGGGGGAGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102821224 1031 - 106955855 ---cctttctgcaagagctcgctgctgcctcggggcctttgcacggctgtttcctctgcctgtaggggctcgtctattagaggatcgtgtgctcccctccgtccaggcttctcagatgacagctgagcacacagccctccccttc-cattcagactggccccactgccccacactctctgccctttccctggtttatgttcctta-cagcatgttgcactgctggacacggcgca-tttatttgcattttgtctccca-ccacaaggtgagctca-gga-ggcgggggcggctctgctccctgctgcgtctgcagctcccacggggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGGGGAGCCCAGGGGACC--GGGTGGTTCATTTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACAACCAGACGGCCAAACAGAGGACGAGGAGCAGGAAGGGGACCCGGGAGGAGGCCCACGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGTTGGACAAGGAGG--GGCCCA-CCATGACGATGCTGAGAGCCGGGGGAAGGAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAAGGGCGGGGTCTCACCTGAGTGTCCATCTCCACCCTGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTCGTCTCCTGGGAAGGTTCCCTGGGACCTCTCAGCCCCGCCAGCCCCTGCCCTGTTCCCAGATGGGGCCACTGAGATGCAGGGA----GGGGCTGCGAT--GTCCCCGAGGTCCCACAGTGTGGGGGGAGATCATCTCACCCTGAGGCCCAGACCCTTTCCAGCCGATGCCCCTTTCCCCATTGCTACGGAAACTTCGGGGCCCCCGTCTCC-----------------------------------------------------CTCCTGGCTGG---CACCTCCTCCTCTCACTCACAGAGGTTTTCTTCCTGGGCGTCGGCAGCTGGGCTGGCCCTGGGGGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3683860 1021 - 64156825 ---CCTTCCTGCAAGAgctcgctgctgcctcggggcctttgcacggctgtttcctctgcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagatgacagctgagcagacagccctcccctta-cattcagactggccc----------cacactctgccctttccctggtttatgtttctta-cagcacattgcactcctggacac-atgca-tttatttgcattttgtctccca-ccacgaggtgagctca-gga-ggcgggggcggctctgctccctgctgtgtctgcagctcccacagggagcccgatccacagtgagctccctgggaacactcgctggatgaatgaatGAAGCGGAGCCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTAACAACTAGACGGTCAAACAGAGGAGGAGGAGTGGGAAGGGGAGCCGGGAGGAGGCCTGTGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGG--GGTCCA-CCGTGATGATGCTGAGAACCGGGGGAA-GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCGGGAGGCCTTTGGTGCCTGGGACAGGGGCGGGGTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCATGGCAGCATCTGCTGGGGCAGAGCAAGGGGTTTTTCTCCTGGGAAGGTTCCCTGGGACCGCTCATTCCTGCCGGACCCTGCCCTGTTCCCAT-TAGGGCCACCGTGATGCTGGGA----GGGGCTGTGAT--GTCCCCGAGGTCCTACAGTGTGGGTTCAGACCACCTCCCCCCGAGTCCCTGACCCTTACCAGCCTGTACTCCTGCCCCCATTGCTATTGAAACTTTGGGGCCCGCATCTCCACC----------------------------------------------------CCAGGTGCA--CCCCCTCTGCCTCTCACTTACTGGGGTTTTCTCCCTGGACGTCAGCAGCTGGCCTGGACCTGGGGGAGGA i rheMac3.chr19 T 38990 I 34 s papAnu2.chr19 47246801 1078 + 51301725 ---CCTTCCTGCAAGAGCTCGCtgctgcctcaggacctttgcacggctgtttcttctgcctgcagGGGCTCGTCCATTAGAGGATCCTGTGGCCCCCTCTGTCCAGGCTTCTCAGATGACAGCTGAGCAGACAGCCCTCCCCTTACCATTCAGACTGGCCCCACTGCCCCACACTCTCTGCCCTTTCCCTGGTTTATGTTTCTTA-CAGCACGCTGCACTGCTGGACAC--tgca-tttatttgcattttgtttcCCA-CCATGAGGTGAGCTCC-AGA-GGTAGGGGTGGCTCTGCTCCCTGCTGTGTCTGCAGCTCCCACAGGGAGCCTGATCCACAGTGAGCT-CCTGGGAACACtcgctggatgaatgaatgaag-ggagcCCAGGGGACCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGG-GCGCTCTAACAACCAGACGGCCAAACAgaggaggaggagcgagaaggggacccaggaggaggcccgcgaggtcctgggacagcaggagagagTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGG--GGTCCACCCCTGACGATGCTGAGAACCGGGGGAA-GAGGACAGAGAAGTCC-TGCAGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGTCTCACCTGACTGTCCAGCTCCACCCCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCGGGGACAGAGCAAGGGGTTTGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCCGGCCCCTGCCCAGCTCCCAGACAGGGCCACTGCGATGA-GGGA----GGGGCTGCGAT--GTTCCCGAGGTCCCACAGTGTGGGGTGAGATCATCTCACCCTGAACCCCAGACCCTTTCCAGCCTGTG--CCTTTCCCCATTGCTACAGAAACTTTGGGGCCCCCATctcctcctggctggtcgcctcccccatctcctcctggctggtcgcctccccca--tcctcctggctgg--tcccctcttcctgTCACTCACAGAGGTTTTCTTCCTGGGTGTCGGCAGCTGGGCTGGACCTGGGGGAGGA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46964421 1084 + 50890351 ---ccttcctgcaagagcttgctgctgcctcaggacctttgcacggctgttgcctctgcctgcaggggctcgtccattagaggatcctgtggccccctccgtccaggcttctcagaggacagctgagcaggcagccctcccctta-cattcagactggccccactgccc--cacactctgccctttccctggtttatgtttctta-cagcacgttgcactcctgctcatggtgca-tttagttgcattttgtctccca-ccacgaggtgagctca-gga-ggtgggggtggctctgctccctgctatgtctgcagctcccatggggagcccgatccacagtgagct-cctgggaacactcgctggatgaatgaatgaaGGGGAGCCCAGGGGAGCG-GGGTGGTTCATCTATTCCT-CATCCTCCTGAGGCCTGGGGA-GCGCTCTCACCACCAGACGGCCAAACAgaggaggaggagcaggaaggggacccgggaggaggCCCTCGAGGTCCCAGGACAGCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACAAGGAGG--GGTCCACCCCTGACGATGCTGAGAACCGGGGGAAGGAGGACAGAGAAGTCC-TGCTGGATTAGATCTGGCACCAGGAGGCCTTTGGTGCCCGGGACAGGGGCGGGGTCTCACCTGACTGTCCAGCTCCACCCTGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCGGGGACACAGCAAGGGGTTTGTCTCCTGGGAAGGTTCCCTGAGACCTCTGAGTCCTGCCGGCCCCTGCCCAGCTCCCAGACGGGGCCACTGCGATGCAGGGA----GGGGCTGTGAT--GTCCCCGAGGTCCCACAGTGTGGGGTGAGATCATCTCACCCTGAGCCCCAGACCCTTTCCAGCCTGTGCCCCTTTCCCCATTGCTACGGAAACTTTGGGGCCCCCATCTCCTCCTGGCTGGTCGCCTCCCCCATCTCCTCCTGGCTGGTCGCCTCCCCCATCTCCTCCTGGCTGG--TCGCCTCTTCCTGTCACTCACAGAGGTTTTCTTCCTGGGTGTAGGCAGCTGGGCTGGACCTGGGGGAGGA i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45540378 1003 + 49145316 ---ccttcccacaagagctcactgcggcctcggggcc-ttgcactgctgtttcctctacctgcaggggctcgtccattagaggatggtgtggccctctccgtccaggcttctcagatgacagctgaccagacagccctcgccttaccattcagactggccccactgccctgcactctctgccctttccctggttcattttcctta-cagcacgtcgcactcctggacac--tgtg-tttatttgcattttgtctccca-ccacgaggtgagctca-ggagggcaggggcggctttgctccctgctgtgtctgcagctcccacggggagccccatccacagggagct-cctgggaacactcgctgggtgaatgaatGAAGGGAAGCCCAGGGCACCA-GTGTGGTTC----ATTCCT-CATCCTCCTGAGGCCTGGGGA-TCCCTCTAACAACCAGACGGCCAAACAGAGGACGAGGAGCAGGAAGGGGACCCAGGAGTAGGCCCACGATGTCCCAGGACACCAGGAGAGAGTGAGGTCACAGCAGGCGGGAGGCAGCGTGCTGGACATGGA-G--GGTCCACCCTGGATGGTGCTGAGAGCCAGGGAAG-GAGGACAGAGAAGTCC-TGCTGGATTAGATCCGGCACCAGGAGGCCTTTGGTGCCCAGGACAGGGGCGGGGTCTCACCTGAGTGTCCAGCTCCACCTCGTCCTCAGGCTGTGTGTCCTTCACGGCAGCATCTGCTGGG-CAGAGCAAGGGGATTGTCTCCTGGGAAGTTTCCCTGGGATGTCTCAGCCCCGccagcccctgcccagctcccagatggggcagctgagatccaggga----ggggttgtgat--gtccc-aaggtcccaca---------------------CCCTGAGCCCCAGACCCCTTCCAGCCTCTGC-CCTTTCCTCATTGCGATGGAAACTGT-GGGTCCCCATCTCC-----------------------------------------------------CTCCTGGCTGGGGTCACCTCTTCCTGTCACTCACAGAGAGTTTCTTCTTGGGTGTCGGCAGCTGGGCTGGATCTGGGGGAGGA i calJac3.chr22 I 1 I 1 s canFam3.chr1 19701716 828 - 122678785 ccatgttcctgaaaaaccatgttgttgcctcaggacctttgcac-----ttgctact----------------------------------------------------------------------------------cccATA-------------------------------TCT----------TGTTTTATATTTCTTAGCCTCACTTTGTGCTTGAGGATGC--TGCAGCTTCTTTGCATATTGTCTGACACCCACAAGGAGAGCTCACTGA-GTATGGTTCAGTTTTGCTTACTGTTGAGCTTGCAAC-ACTAGGTGGGGCCTGGT-AATATTAGACTGCTCGTGCTCCTCTGCTGAGTGAATGAATGAAG-GAGGCCTAGAGACTTGTGGGTGATTCACTTCTTCATGCACCCTGTTGAGATCTGGGTATGCATCCCAACAACAAGA-AGTCAGACAGTGGATGGGTAGCCAGA--------CATGGGGAG------GAGGGCCCAG----------------GAGGTCACAGCGGG-ATGACCCAG-GTGCCCAAGAAGGGAGAAGGTACACGTGGGACAGAGCTGAGACAGGGTGGTGTGAGGACAGAGAAGCATGTGTCAGATTAAGTTTGGCACCAAGAGGACCCTATGGTCCAGATGGGAGTGGGGGTCTCACCCGATGGTCCAGCTCGACCCCTTCCTCAGGCCATGTGTCTTGCACAGCAGCATCTG-TGGAGTAGAACGGGGTGTGTGTCTT---GGCGGGTTCCCTGAGCTCTCTCAGGGGTG-CAGACCCTGACCTGCTCCCAGATGAGGAGGCTGTGACCCAGGGGATCCAGGGGTGAGGTTAGGTGCTAAGATCATGCA-TGTGGGAA--------------TTGAGTCCT-----------------TACCCCTTACCCCA---------AACCTTCCAG---CCCACCCCC------------------------------------------------------------AAGG--CAGCCCCTTCCT----CTCACAGAGGGTTTCCTCCTGGGTGGTAGCAGCTGGGCTGGAGCTGGGGAGGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=30585.000000 s hg38.chr19_GL949753v2_alt 251306 31 + 796479 ATGGGAGCTTTAGGGGCAGTGTA-----TGGGCCAC s panTro4.chr19 59191652 31 + 63644993 ACGGGAGCTTTAGGGGCAGTGAA-----TGGGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4256346 31 - 60714840 ACGGGAGCTTTAGGGGCAGTGTA-----TGGGCGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102822255 30 - 106955855 ACGAGAGCTTTAGGGGCAGTGGA-----TGGGC-AG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47247879 35 + 51301725 AAGGGAGCTTTAGGGGCAGTGTACggggggggCCC- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46965505 30 + 50890351 ACGGGAGCTTTAGGGGCAGTGTA-----GGGGCCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541382 30 + 49145316 ACAGGAGCTGTAGGAGCAGTGTG-----TGGGCTG- i calJac3.chr22 I 1 C 0 s canFam3.chr1 19702544 28 - 122678785 ACATGGTGTCAGAGGGCA-TGCA-----GGGGGT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3684881 34 - 64156825 I a score=418262.000000 s hg38.chr19_GL949753v2_alt 251337 172 + 796479 GAGCAGGTGGGAGTCT-GGGGTCTTCGGGCA-GAATTACCTCCACTGCAGGCCTCTGTCTGTGGGCTCTGGCCCCACAGCCCCTGCAGGATGTTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACAGAGCCTCAGCCCTGGGAACATTGGAGCCCCCTGCCCTGCACA s panTro4.chr19 59191683 172 + 63644993 GGGCGGGTGGGAGTCT-GGGGTCTTTGGGCA-GAATTACCTCCTCTGCAGGCCTCTGTCTGTGGGCTCTGGCCCCACAGCCCCTGCAGGATGCTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACAGAGCCTCAGCCCTGGGAACATTGGAGCCCCCTGCCCCGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4256377 172 - 60714840 GGGCGGGTGGGAGTCT-GGGGTCTTTGGGAA-GAATTACCTCCTCTGCAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCGGGATGTTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACACAGCCTCAGCCCTGGGAACATTGGAGCCCCCTGCCCCGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102822285 172 - 106955855 GGGCGGGTGGGAGTCT-GGGCTCTCCGGGCA-GAGTTACCTCCTCTGCAGGCCTCTGTCTTTGGGCTCTGGCTCCACAGCCCCTGCAGGATGCTGGAAATCAGCTTTTCTCTGGGCTGAGGGAAGAAGGACAGAGCCTCAGCCCTGGGAACATTGGAGCCCCCTGCGCCCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3684915 172 - 64156825 GGGTGGGTGGGAGTCT-GAGGCCTTCTGGCA-GAATTACCTCCTCTGTAGACCCCCATCCTTGGGCTCTGGCTCTGCAGCCCCTGGAGGACGTTGGAAATCAGCCTGTCTCTGGGCTGGGGAAAGGTGCACAGAGTCTCAGCTCTCGGAATGTTAGAACCACCTGCCTTGCACA i rheMac3.chr19 I 34 I 715 s papAnu2.chr19 47247915 166 + 51301725 ------GTGGGAGTCT-GGCGTCTTCGGGCA-GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGATGTTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACAGAGCCTCAGCCCTGGGAACATCGGAGccccctgccccccACA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46965535 167 + 50890351 -----GGTGGGAGTCT-GGGGTCTTTGGGCA-GAATTACCTCCTCTGAAGGCCTCTGTCTCTGGGCTCTGGCTCCACAGCCCCTGCAGGATATTGGAAATCAGCCTTTCTCTGGGCTGGGGGAAGAAGGACAGAGCCTCAGCCCTGGGAATATCGGAGCCCCTGCCCCCCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541412 172 + 49145316 GGGTGAGTGGGAGTCT-GGGGTCTTCAGGCA-GAATTACCTCCTCTGCAGGCCTCCGCCTGTGGGTTCTGGCTTCACAGCCCCTGCAGGATGTTGGAAATCAGCCTCTCTCTGGGCTGTGTGAAGAAGGACAGAGTCTCAGCCTTGGGAACATTGGAACCATCTGCCCTGCAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19702572 139 - 122678785 GGGTGGGTGGGAGTCTGGGGGTCTGTGGGCAGGAGTTACCTGTCCTGCAGGCCTCTGTCCTTGGGCTCTGGGTCTGCATCCCCTGCAGGACATTAGGAATCAGCATCCCTCTGGAATGGGAG-----------------------------GTTACAACCTCCTGCCT------ i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=114699.000000 s hg38.chr19_GL949753v2_alt 251509 82 + 796479 CACAGCTCGAAGGTAAGGAAGGAAACCTAAAAACACTCCTGCCT-----CCATGTTCCAAATGCCTCATGAGATGGACAGAGTCCGA s panTro4.chr19 59191855 82 + 63644993 CACAGCTCAAAGGTAAGGAAGGAAACCTGAAAACACTCCTGCCT-----CCATGTTCCAAATACCTCATGAGATGGACAGAGCCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4256549 82 - 60714840 CACAGCTCGAAGGTGAGGAAGGAAACCTGAAAACACTCCTGCCT-----CCATGTTCCAAACGCCTCATAGGATGGATGGAGCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102822457 67 - 106955855 CGCAGCTCAAAGGT---------------AAAACACTCCTGCCT-----CCATGTTCCAAATGCCTCATGAGACGGACAGAGCCCGA i nomLeu3.chr10 C 0 I 283 s papAnu2.chr19 47248081 82 + 51301725 CACAGCTGGAAGGTAAGGAAGGAAACCGGAAAACACTCCTGCCT-----CCGTGTTCCAAATGCCCCATGAGATGGACAGAGCCCGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46965702 87 + 50890351 CACAGCTCGAAGGTAAGGAAGGAAACCTGAAAACACTCCTGCCTCCATGCCATGTTCCAAATGCCCCATGAGATGGACAGAGCCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541584 82 + 49145316 CGCAGCTCGAAGGTAAGGAAGGAAACCTGGACACACTCTTGCTT-----CCATGCTCCAAACGTCTCAAAAGATGGAGAGAGCCCAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19702711 70 - 122678785 --CCATGTGATACCAGGGAAAGGAGCCCTTCACCCGCATTGCCT-----GTGTGTTTC-TCCATCTCCCAAGATTGAA--------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3685087 715 - 64156825 I a score=892312.000000 s hg38.chr19_GL949753v2_alt 251591 545 + 796479 AGGACACTTTACATTTGTAGATGGGACTGAGCCCGGAGGACACTTTATATTTGTAGATG----------------------------------------------------------------------GGACTGACGTTAAGTGCTTTCTCCAT---TCACCTGGTGAGAAATGCTGGAACAGTTTCTCAAAGCTGCATTTGCCCAGTGGTTTGGATTCTCTTTGGCT-GTGCCCTGAGCCCACCCTCGGTCGGCCCACAGGGTTTCCCC-----------------TTCCCTACTCACTTGATGTCCAGTGTTTGCCCTGACGTCGATGTCggaggatgaggaagaggaggaggaggaggaggagcagtaggacgaCGGCCACCAAGATGCCGATCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCACGA-TGATGTCAGGGATGGG--GGTGATGTCATTGAAAtgagcgcctactgtgtg-caggtgactgctggaccttctgttcaccacctccaacccccacaacagtcgtgcagcacacaa-----acatccaccccacccactctacagatgaaaaactgacgctcagagaggggaatcgcctgccccggg-cccccagccaggaagcggcagagc s panTro4.chr19 59191937 546 + 63644993 AGGACACTTTACATTTGTAGATGGGACTGAGCCCGGAGGACACTTTACATTTGTAGATG----------------------------------------------------------------------GGACTGACATTAAGTGCTTTCTCCAT---TCACCTGGTGAGAAATGCTGGAACAGTTTCTCAAAGCTGCATTTGCCCAGAGGTTTGGATTCTCTTTGGCT-GTGCCCTGAGCCCACCCTCGGTCGGCCCTCAGGGTCCCCCC----------------ATTCCCTACTCACTCGATGTCCAGCGTTTGCCCTGACGTCGGTGTCggaggacgaggaacaggaggaggaggaggaggagcaggaggaCGACGGCCACCAAGATGCCGATCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCACGA-TGATGTCAGGGATGGG--GGTGATGTCATTGAAAtgagcgcctactgtgtg-cagatgactgctggaccttctattcaccacctccaacccccacaacagtcgtgcagcacagaa-----acatccaccccacccgctgtacagatgaaaaactgacgctcagagaggggaatcgcctgccctggg-cccccagccaggaagcggcagagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4256631 537 - 60714840 AGGACACTTTACATTTGTAGACGGGACTGAGCCCGGAGGACACTTTACATTTGTAGATG----------------------------------------------------------------------GGGCTGACATTAAGTGCTTTCTCCAT---TCTCCTGGTGAGAAATGCTGGAACAGTTTTTCAAAGCTGCATTTGCCCAGTGGTTTGGATTCTTTTTGGCT-GTGCCCTGAGCCCACCCTCGGTCAGCCCACAGGGTTCCCCC----------------ATTCCTTACTCACCCGATGTCCAGTGTTTGCCCTGACGTCGATGTCggaggacgaggaa---------gaggaggaggagcagtaggacgaagGCCACCAATACACTGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCACAA-TGATGTCAGGAATGGG--GGTGATGTCATTGAAAtgagctccttctgtgcg-caggtgactgctggaccttctattcaccacctccaacccccacaacagtcatgcagcacagaa-----acatccaccccacccacttgacagatgaaaaactgatgctcagtaaggggaattgcctgccccagg-cccccagccaggaagcggcagaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102822807 613 - 106955855 AGGACACTTTACATTTGTAGATGGGACAGAGCCCGCAGGACACTTTACATTTGTAGATGGGACAGAGCCCGCAGGACACTTTACATTTGTAGATGGACAGAGCCTGCAGGACGCTTTACATTTGTAGATGGACTGACGTTAAGTGCTTTCTCCAT---TCGCCTGGTGAGAGATGCTGGAACAGTTTCTCAAAGCTGCATCTGCTCAGTGGTTTGGATTCTCTCTGGCT-GTGCCCTGAGCCCACCCTCGGTCGGCCCACAGGGTCCCCCC----------------ATTCCCTACTTACCCGATGTCCAGAGTTTGCTGTGACGTCGATGTCggaggacgaggaa---gaggaggaggaggaggagcagcaggacgaAGGCCACCAAGACGCCGGTCACAACCCCCAGATGCCTTCCCAGACCTTGAGCACGA-TGATGTCAGGAATGGG--GGTGATGTCATTGAAAtgagcacctactgtatg-caggtgactgctggaccttccattcaccacctccaacccccacaacagtcgtgcagcacagaa-----acatccaccctacccactgtacagatgaaaaactgaggctcagagaggggaatcgcctgccccagg-cccccagccaggaagcggcagagc i nomLeu3.chr10 I 283 C 0 s papAnu2.chr19 47248163 501 + 51301725 ------------------------------------AGGACACTTTACATTTGTAGATG----------------------------------------------------------------------GGACTGACATTAAGTGCTTTTTCCAT---TTGCCTGGTGAGAAATGCTGGAACAGTTCCTCAAAGCTGCATTTGCCCAGTGGTTTGGATTCCCTTTGGCT-GCACCCTGAGCCCACCCTCAGTCAGCCCACAGGGTCTCCCC-----------------TTCCCTACTCACCCGATGTCCAACGTTTGCCCTGACGTCGATGTCggaggacaaggaagaggaggaggaggaggaagagcagcaggacgaaggCCACCAAGACGCCGGTCACAACCCCCAGGTGCCTTCCCAGACCTTGAGCATGA-TGACATCAGAAATGGG--GGTGATGTCATTGAAATGAGCTCCTACTGTG----------GTGCTGGACCTTCTGTTCACCACCTCCAACCCCTACAACAGTCGTACAGCACGGAATGG--AAAC---ACCCACCCACCTTACAgatggaaaactgaggctcagagaggggaaccGCCTGTCCCAGGACCCCCAGCCGGGAAGCGGCAGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46965789 504 + 50890351 ------------------------------------AGGACACTTTACATTTGTAGACG----------------------------------------------------------------------GGACTGACATTAAGTGCTTTTTCCAT---TTGCCTGGTGAGAAATGCTGGAACAGTTCCTCAGAGCTGCATTTGCCCAGTGGTTTGGATTCCCTTTGGCTGGTGCCCTGAGGCCACCCTCGGTCGGCCCATGGGGTGCCCCC-----------------TTCCCTACTCACCCGATGTCCAGCGTTTGCCCTGACGTCCATATCggaggatgaggaggaggaggaggaggaggaAGAGCAGCAGGACGAAGGCCACTGAGACCCCAGTCACAACTCCCAGGTGCCTTCCCAGACCTTGAGCATGA-TGACATCAGAAATGGG--GGTGAtgtcattgacatgagctcctactgt-----------gtgctggaccttctgttcgccacctccaacccccacaacagttgtacagcacggaatgg--aaacacaacccacccaccttacagatggaaaactgaggctcagagaagggaatcgcctgccccaggacccccagccgggaagcggcagagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45541666 515 + 49145316 ------------------------------------AGGACGCTTTACATTTGTATGTGG---------------------------------------------------------------------GGACTGACACTAAGTGCTTTCTCCAT---TTGCCTGGTGAGAAGTGCTAGAACAGTTTCTCAAAGCTGCGTTTTCCCAGCAGTTTGGATTCCCTCTGGCTGGTGCCCTGAGCCCACCCTTGGTTGGCCCACGGGGTCCCCCC-----------------TTCTATACTCACCTGATGTCCAGTGTTTGCCCTGACGCTGATGTCggaggacgaggaagaggaggaggaggaggaagagcagcaggaTGAAGGTCACTGAGACCCCGGTCACAACCCCCAGGTTCCTTCCCAGACCTTGAGCATGA-GGACGTCAGGAAT-GG--GGTGGTGTtactgat-tgagcgcctactgtgtg-caggtgactgctcggcctcttattcaccaccttcaacccccactacagtcgagcagcgcggaattgacacatccaccccacccactttacagacaaaaaactgaggctcagagaggggagtcgcctgccccaggccccccagctaggcagcagcagagc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19702781 536 - 122678785 ------------------------------AAGAGGGGAGCACCTTCTATTGGCACATG----------------------------------------------------------------------GGAGCCAACCTGGGTGTTTTCTGTCTAGACTCTCTGACTTGAGATTCTGTGGAAGTGTCCTACATCGGCCTTT-CCCACCTCTCTGGGTTCCCTCTGGCTGCTGCCCTGAGCCCACCCTGGGTCAGCCCACAGAGCACCACCACCCCTGGGGTGCCTCAGCCCCTTCTTACTTGACTTCCTGCATTTGCCCCGACGTTGCTGTC---GGACCAGGAA---GAGGATGAGGAGGCAGAGCATCAGGATGAAGGCCACCGAGGACCCGATGAGGACGTACAGGTACCAGCTAGGACCTTGGGCAGGAGCTATACCATGAATGAGCCAGTGATTCCATtttactgagcacctactgtgtgccaggcacctgctgggctctgtgcttg-cacctgtgactctgacaatgatcatgcagcaggggattg--ctgtccctcccacctgctccacagactgtaaactgaggcacagaggggtcaatcacgtgtcccaggtcgtccagtgtggaggtggcagggc i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3685087 715 - 64156825 I a score=96685.000000 s hg38.chr19_GL949753v2_alt 252136 47 + 796479 tgggaagggagcccgggagtctga------cctg---------------------cagcccttgtt---cctg------cacc s panTro4.chr19 59192483 47 + 63644993 tgggaagggaacccgggagtctga------cctg---------------------cagcccttgtt---cctg------cacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4257168 48 - 60714840 tgggaagggagcccgggagtctga------cctg---------------------cagcccttgtt--ccctg------cacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102823420 47 - 106955855 tgggaagggagcccgggagtgtga------cctg---------------------cagcgcttgtt---cctg------cacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3685802 48 - 64156825 TGGGAAGGGAACCGGGAAGTCTGA------CCCG---------------------CAGCCCTTGTT--CCCTG------CACC i rheMac3.chr19 I 715 C 0 s papAnu2.chr19 47248664 48 + 51301725 TGGGAAGGGAACCCGGGAGTCTGA------CCCG---------------------CAGCCCCTGTT--CCCTG------CACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46966293 48 + 50890351 tgggaagggaatccgggagtctga------actg---------------------cagtccttgtt--ccctg------cacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542181 69 + 49145316 tgggaagggaacctgggAGTTTGA------TCTGCTGAGAGCCAGGGAAGGAGGACAGCCCTTGTT--CCCTG------CACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19703317 63 - 122678785 tgggacaggaagttggga---tgaaggttccctg-----------------tgctctACTCATGCCTCCCCTGTGAGGTCACC i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 29455 + 145441459 T e macFas5.chr19 55154705 22451 + 59248254 I a score=1069025.000000 s hg38.chr19_GL949753v2_alt 252183 479 + 796479 aGAGCCGAGCCCCG-GAGCTGC-----AGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGACTCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCTCTGCTGCAGGTGGGACGGGACAGGCCCCCGCGGAATCG-AGTCTTGGAGTCTTCCCTGAGGGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtgagagctgaaaggaactttcccacct-g---caggcctctctcctttacacttggagaaactgaggcccaggcaggggaggagcctgtctacatcaccacctccagaggagcctgaacctaggacagaacccacccctgcctcccCGGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCACCACTTTGGGGATCCGACCCAGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGAGGGGG--AGGTGAGGGCTGGGGCTGCCCTGCTCCCCACATCAGCCTGGCTG-C------------TCCTCCC s panTro4.chr19 59192530 479 + 63644993 aGAGCCGAGTCCCG-GAGCTGC-----AGGGAAAGAGCCTGACT----------GTCTTGAACCA---------------------------------TGACTCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCCGCGGAATCG-GGTCTTGGAGGCTTCCCTGGGAGGCCTCCTCTCCCAG--GAGGGCAGAGCTGGGAgtgagagctgaaaggaactttcccaccc-g---caggcctcttgcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccacatcgccacctccagagaggcctgaacctaggacagaacccacccctgcctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCACCACTCTGGGGATCCGACCCGGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATAGGG--AGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCCGGCTG-C------------TCCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4257216 477 - 60714840 aGAGCTGAGCCCCG-GAGCTCC-----AGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCCGCGGAATCG-GGTCTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggagctttcccaccc-g---caggcccctctcctttacacttggagaaactgaggcccaggcaggggaggggcccgtccacatcgccacctccagaggagcctgaacctaggacagaacccactcctgcctcccCTGGACCCCGCCCACCTCCCACT--CAGAGCCCCTCACTCACCACTCTGGGGATCCGACCCCGTGGGGGTGACGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGACAGGG--CACTGAGGGCTGGGGCT-CCCTGCTCCCCACGTCAGCCCGGCTG-C------------TCCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102823467 488 - 106955855 aGAGCCGAGCCCTG-GAGCTGC-----AGGGAAAGAGCCTGACC----------GTCCTGAATCA---------------------------------CCGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------ATCTCTGCTGCAGGTGGGACAGGACAGGCTCCCGTGGAATCG-GGTCTGGGAGG-TTCCCCGGGAGGCCTCCTCTCCCAG--GAGGTCACAGGTGGGAgtcagagctgaaaggaactttcccaccc-g---caggcctctctcctttacacttggagaaacggaggcccaggcaggggaggggcctgtccacatcgccacctccagaggagcctgaacctaggacagaactgacccctgcctcccCAGGACCCCGCCCACCTCCCACT--CAGAGCCCC-CACTCACCACTCTGGGGATCCGACCCCATGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCTGGATGGGG--AGGTGAGGGCTGGGGTTACCTTTGCTCCCCCATT-GCCCGGCTG-CTCCTCCCCCAGGTCCTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3685850 478 - 64156825 GGAGCTGAGCCCCA-GAGATGC-----AGGGAAAGAACCTGACC----------GTCCTGAACCA---------------------------------CAGCCCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACCGCTGCAGGTGGGACAGGACAGGCCCCTGTGGAATCG-ACTCTGGGAGCCTTCCCT-GGAGGCCTCCTCTCCCAG--GAGGTCACAGCTGGGAgtcagagctgaaaggaacgttcccaccc-g---caggcctctctcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccacgtcaccacctccagaggagcctgaacctaggagagagcccacccctgccccccagGGACTCCATTCACCTCCCAAT--CAGAGCCCCTCACTCACCACTCTGGGGGTCTGACCCCGTAGGCATGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTTAGAACAGGG--ACGTGAGGGCTGGGGCTGCCCTGCCCCCGACCTCAGCTCGGCTT-C------------TCCTCCC i rheMac3.chr19 C 0 I 39402 s papAnu2.chr19 47248712 477 + 51301725 AGAGCTGAGCCCTG-GAGCTGC-----AGGGAAAGAGCCTGACC----------ATCCTGAACCA---------------------------------Cagccctgctcccctcccctgcccc----aggtCACC------GTCACTGCTGCAGGTGGGACAGGACAGGCCCCTGCGGAATCG-GGTCTGGGAGGCTTCCCTGGGAGTTCTCCTATCCCAG--GAGGCCACAGCTGGGAGTCAGAGCTGAAAGGAACGTTCCCACCT-G---CAGGCCTCTCTCCTTTACacctggagaaactgaggcccaggcaggggaggggcctgTCCACGTCACCATCTTCAGAGGAGGCTGAACCTAGGACAGAATCCACCCCTGCCTCCCC-GGACCCCGCCCACCTTCCTCT--CAGAGCCAC-CACTCACCACTCTGGGGATCCGACCCCGTGGGGTTGAGGGACTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCTGCCCTGCCCCCCATGTCAGCCCGGCTG-C------------TCCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46966341 478 + 50890351 aGAGCTGAGCCCCG-GAGATGC-----AGGGAAAGAGCCTGACC----------GTCCTGAACCA---------------------------------CGGCGCTGCTCCCCTCCCCTGCCCC----AGGTCACC------GTCACTACTGCAGGTGGGACAGGACAGGCCTCTGCGGAATCG-GGTCTGGGAGGCTTCCCTGGGAGGCCTCCTCTCCCag--gaggtcacagctgggagtcagagctgaaaggaacgttcccaccc-g---caggcttctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccacgtcaccacctccagaggagcctgaacctaggacagaagccacttctgcctcccCAGGACCCCGCCCACCTTCCTCT--CAGAGCCCC-CACTCACCACTCTGGGGGTCCGACCCCGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCT-GGGTCAGGATGGGA--AGGTGAGGGCTGGGGCGGCCCCGTCCCCCATATCAGCCCGGCTG-C------------TCCTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542250 445 + 49145316 TGAGCTGAGCCCTG-GAGCTGC-----AGGGAAAGAGCGTGACC-----------TACTGAACCA---------------------------------AAGCCCTGCTCCCCTCCTCTGCCCC----AGGTCACCGTCACTGTCACTGCTGCAGTTGGGACAGGACAGGCTCCTGAGGAATCA-GGCCTGGGAGGCTTCCCTAGGTGGCCTCCTCTCTCAG--GAGGTCACAGCTGGGAgtcagagctaaaaggaactttcccaccctg---caggcctctctcctttacacttggagaaactgaggcctaggcaggggaggggcct----------------------------------------GAACTGAGCCCTGCCTCCCCTGGACCCCACCCACCTCCCGCT--CAGAGACCCCGACTAACCACTGTGGGGATCTGGCTCCATGGGAGTGAAAAGCTGGTCCTCAGGGACTGCT-GGGTCAGGATGGGG--ACATGAGGATTGGGGCTGACCTGCTCCCCATGTCAGTCCGGCTG-C------------TCCTCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3839988 433 + 145441459 AGAATTATGCCCCATGAGCTAG-----ACTGAAGGAGCCTGA------------GTCCCCCACCA---------------------------------TGGCTATTTGACCCACCCTTGCCAT----GCATCAGT------AG----ACTGTGGGCTAGACTGA--------CTGCAGAATCA-AGTTCTGGGGA-------------TCTCCTCTATCAGGAGAGGTAACAGCT-TCAATCATCACCAAAAATA-CACAGACACGT-GAACCAGGCTTCTCCCATTCATACTCAGAGAAGGAGCAGCCCA-GCAATGGAAGGGACTGTCCAAGT-AGGACCTCCAGCTGCAGCTTTATC-AGGATATAAGC-AGCTTTACCCATCTGAG------CCTACATTCCAA---CAGAGTCTT-TGTTAGTAATCCCGGGA--CAGATTCTGTGCAGGGGAAATGTTTGTTTCTTAGGGATATT---------ATGGGG--AGGTGACTTTCTAGGTT-CTTTGCTCACAATCTTA-CCCAGCTGTC------------TCATCAT i mm10.chr7 T 29455 C 0 s canFam3.chr1 19703380 483 - 122678785 -ACTCCGAGGCTCT-GGGCTCCTCATTTGGGGCAGGATCTGTCCCAGCATCTTCATCCTGAGCTGAGGGTCCTTCCAGACCTCAACACCCCCAGCCATCAACTTCCCTCTCCTCCCCTCCTCCTACAATATCACT------GTCATTGCTGCAGA-GGGACAGA--CACCTTCCCTAGAATCATGATTTGGGTAACTTCCCCATGAGCCCTCCTCTCCCag--gaggtcagagccatg-gtcagaacc--aaggacaaatctaatct-gggccatgactctctcttttacacttggggaaactgaggcccacacatgggaggggcatgtccaagacagggaatgtagagggtcatgaagtgagggtgtaaatcagccctgatccccaTGA--CCCACCCACCACCTCCTGACAGAGACCCTCACTTAC---------------------------------------CCTCAGAGACTCCTGGGGTCAGTAGAGGGTCAGGGGAGGGCCTGTGTG-------CTTCCACTGCA--CCTGCTG-C------------CCCTCCC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55154705 22451 + 59248254 I a score=349086.000000 s hg38.chr19_GL949753v2_alt 252662 278 + 796479 CCAGGCTGGGCCCCAACACTTCTCTCTGCCTCGATCCCCCACCCCTCACCAGCCCAGCCTCAGAGCCCTGGGGACCCTGTGGCCCCTC-------------------CTCTGGCTCTGCC-CAGCTCCCTGGACAGAAGCCCTTGATTGAGTCCCTGAAGGGAATGGGATCCTCCTGGACACTCAAAGCTGCCCTGGGGGTCGCTGC-GCTCCCTTCGAG-CCAGAGGCCTCAGGGACTCACCAGGTGTGGAGATGGGACCGGTGGGTGGGGGGCTGGAACCCATGGAGGGTCCTGGGTG s panTro4.chr19 59193009 279 + 63644993 ACAGCCTGGGCCTCAACATCTCCCTCTGCCTCGACCCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCAGGGAGCCTGTGGCCCCTC-------------------CTCTGGCTCTGCC-CGGCTCCCTGGATGGAAGCTCATGCTTGAATCCCCGAAGGGAATGGGATCCTCCGGGAGACTCCAAGCTGCCCTGGAGGAGGCTGT-GCTCCCTCCAAGCCCAGAGGCCTCAGGGACTCACCAGGTGTGGGGATGGGACCGGTGGGTGGGGTGCTGGGAACCATGGAGGGTCCTGGGTA i panTro4.chr19 C 0 I 316 s ponAbe2.chr19 4257693 279 - 60714840 CCAGGCTGGGCTCCAACATCTCCCTCTGCCTCGACCCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCTGGGAACCTGTGGCCCCTC-------------------CTCTGGCTCTGCC-CAGCTCCCTGGAGGGAAGCTCATGCCTGAGTCCTTGAGGGGAATGGGATCCTCGGGGAGACCCAGGGCTGCCCTGGGGGAGGCCGT-GCTCCCTCTGAGTCCAGAAGCCTCAGTGACTCACCAGGTATGGAGGTGGGGACTGTTGTGGGGGAGCTGGCGCCCCCAGAGGGTCCTGGGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102823955 280 - 106955855 CCAGGCTGGGCCCCAACATCTCCCTCTGCCTCAACCCCTCTCCCCTCACCAGCCCAGCCTCAGAGCCCCGGGGAGCCTGTGGCCCCTC-------------------CTCTGAATCTGCCTCAGCTCCCTGGAGGGAAGCCCTTGCTTGAGTCCCCGAAGGGAATGGGATTGTCTGGGAGACTCAGGACTGCCCTGGGGGAGGCTGC-GCTCCCTCCGAGCCTGGAGGCCTCAGGGACTCACCAGGTGTGGGGATGGGACCAGTGGGTGGGGGACTGGGAACCATGGAGGGTCCTGGGTA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249189 256 + 51301725 CCAGGCTGGGCCCCAACACGTCCCTCTGCCTC--------GACCCTCACCGGCCCAGCCT--GAGCCCCTGGGAGCCTGTGGCCCCTC-------------------CTCTGGCTCTGCC-CAGCTCCCAAGATGGAAGCCCGAGCTTGAGTCCCCGAGGGGAATGGG--ACTCTGGGAAATG-----------TGTGGGAGGCCGT-GCTCCCTCTGAGCCCAGAGGCCTGAGAGACTCACCAGGTGTGGGGGTGGGACCAGTGAGTGGGGGGCTGGGACTCCCAGAGGGTCCTGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46966819 279 + 50890351 CCAGGCTGGGCCCCAACACCTCCCTCTGTCTTGCCCCTGAGCCCCTCACCGGCTCAGCCTCAGAGCCCCTGGGAGCCTGTGGCCCCTC-------------------CTCTGGCTCTGCC-CAGCTCCCGGGGTGGAAGCCCATGCCTGAGTCCTTGAGGGGAAAGGGTTTCTCTGGGAGACTCAGGGCTGCCCCGGGGGAGGCTGT-GCTCCCTCTGAGCCCAGAGGCCTCAGGGACTCACCAGGTGTGGGGGTGGAGCCGGTGGGTGGGAGACTGGGACTCCCGGAGGGTCCTGGGTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542695 246 + 49145316 TCAGGCTGGGCCCCATCATCTCCCACTGCCTCGACCTCCTGCCCCTCAC-----CAGCCTCAGAGCCCT-GGGAGCCTGTG--CCCCT-------------------GTCTGTCTCTGCC-CAGCCCTCTGGAGGGAAGTCTGTGC-TGAGTCCTTGAGTGGAACAGGATCCTCTGGGAGACCCGGGACTGCCC------------------------AGCTGAGAGGCGTTAGTTACTCACCAGGTGTGGGGGTGGGACCGGTGGGTGGAGGGCTGGGTCCACTGGAGGGTCCTGGGT- i calJac3.chr22 C 0 C 0 s mm10.chr7 3840421 270 + 145441459 CCAAGTGGAGGCTCAATGCCTCTCTTTGGATG-------CTACCTTCTGTAGCCCAACAGTTAAGCCCC----AGCCTCTGGTTTCTCTTTTAGGATATTTGCTGGTCTTTGATACTCCC-AAGCTGACATGACTGAGAAATGAGA-AGTGTCATTAACAGGAGCTGGTTTTT------------AGGCTGCCT-----GTGTTTGTAGCACTTTTCCTACAAAGATATGTGTGATACTTACGAATTGGTGGGATGGGCCTTTTGGGAGACCAGGTGGAGGATTCAATGGTTTCTAGGAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19703863 196 - 122678785 -CCAGATGGGTCCCCACCCCTCCCTATCCCATGAACACCCAGCCTCCTCCA--CCAGCC---GAGACCCCTGGTGCCCATCGGCCCCC-------------------TTTCATCTCTGAG-AGACT----------------------------------GGAACCAAAGCCCCTGGA--------------------------------------------CGGACGCCCCTGTAACTCACCAGCTGTTGGGCTGGATATTGTGGGTGGGGGACCATGGTGTCCAGAGGATCCTGTGCA i canFam3.chr1 C 0 C 0 e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3686328 39402 - 64156825 I a score=57169.000000 s hg38.chr19_GL949753v2_alt 252940 44 + 796479 AAAGAATGAGAGGAGGGTGAGGAGCTGGGGCTTTCCTGAAGTTT------------ s panTro4.chr19 59193604 44 + 63644993 aaagaaTGAGAGGTGGCTGAGGAGCTTGGGCTTCCCTGAAAAAT------------ i panTro4.chr19 I 316 C 0 s ponAbe2.chr19 4257972 44 - 60714840 AAAGAATGAGAGGAGGCTGAGGAGCCAGGGCTTCCCTGAAGTCT------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824235 44 - 106955855 AAAGAATGAGAGGAGGCTGAGGAGCTGGGGCTTCCCTGAAGAAT------------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249445 43 + 51301725 AAAGAATGAGAGGAAGCTGAGGAGC-GGGGCTTCCTTGCAGTCC------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967098 43 + 50890351 AAAGAAAGAGAGGAGGCTGAGGAGC-AGGGCTTCCCTGAAGAAT------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542941 44 + 49145316 AAGGAATGGGAGGAGGCAGAGGAGCTGGGCCTTGCCTGAAGCCT------------ i calJac3.chr22 C 0 C 0 s mm10.chr7 3840691 34 + 145441459 ACAGAACAAGAAGATG----------ATGTTCTTCCTGCTGTTT------------ i mm10.chr7 C 0 C 0 s canFam3.chr1 19704059 51 - 122678785 AAAAGACAGGAGCGGGGGCAGGAGC-----TTCCCTTAGAGACCCTGTCTATGCTC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3686328 39402 - 64156825 I a score=343708.000000 s hg38.chr19_GL949753v2_alt 252984 196 + 796479 CCACCTCAAACCAAATTTCTCTACATGGGCCCTGTGGCCTCCCCAGGCCCCTCCCTCCACCCGCCTCTCCTGTCCATGATGCTGGCGATGCCGCTGAGTG--TGCGCAGGCCTGGGAGGGC-----CTGTTGTCCTCCTTCCCTCTGA-GGGTGAGTCTCCCACTGGCTGAGCCCCGCTCAGACCCCCGCTCACTCCATCCCAG s panTro4.chr19 59193648 195 + 63644993 CCCCCTCAAACCAAATTTCTCTACATGGGCCCT-TGGCCTCCCCAGGTCCCTCCCTCCACCCACCTCTCCTGTTCATGATGCCGGTGATGCTGCTGAGTG--TGGGCAGGCCTGGGAGGGC-----CTGTTGTCCTCCTTCCCTCTGA-GGGTGAGTCCCCCTCTGGCTGAGCCCCGCTCAGACCCCCGCTCACTCCATCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4258016 196 - 60714840 CCACCTCAAACCAAATTTCTCTACATGGGCCCTGTGGCCTCCCCA-GCCTCTCCTTCCACCCACCTCTCCTGTTCATGATGCTGGCGATGCCGCTAAGGG--TGGGCATGCCTTAGAGGGAG----CCGTTCTCCCCCTCCCCTCTGAGGGGTGAGTCTCCCACTGGCTGAGATCC-CTCAGACCCCCGCTCACTCTGTTCCAG i ponAbe2.chr19 C 0 n 0 s nomLeu3.chr10 102824279 196 - 106955855 CCCCCTCAAACCAAATTTCTCTACATGGGCCCTGTGGCCTCCCCA-GCCTCTCCCTCCACCCACCTCTCCTGTTCATGATGCTGGCGATGCCGCTGAGGG--CGGGCATGCCTTAGGGGGAG----CCGTTCTCCTCCTCCCCTCTGAGGGGTGAGTCTCCCACTGGCTGAGATCC-CTCCGACCCCTGCTCACTCCATCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3725730 191 - 64156825 CCACCTCAAACCAAATTTCTCTACATGGGGGCTGTGGTCTCCCCAGGCCCCTCCCTCCACCTACCTCTCCTCTTCATGATGCTGTTGATGCTGCTGAGGG--TGGGCATGCCTGGGAGGGCC----CTGTTGTCCTCCTCCCCTCTGA-GGGTGAGTCCCCCTCTGGCTGAGCCCCTTTCAGA-CCCCACTCTCCCCAT----- i rheMac3.chr19 I 39402 C 0 s papAnu2.chr19 47249488 196 + 51301725 CCGCCTCAAACCAAATTTCTCTACACGGGCCATGTGGCCTCCTCAGGCCACTCCCTCCACCCACCTCTCCTCTTCATGATGCTGGCGATGCCGCTGAGGG--TGAGCATGCCTGGGAGGGCC----CTGTTGTCCTCCTCCCCTCTGA--GGTGAGTGCCCTTCTGGCTAAGCCCCGCTTAGATCCCTGCTCACTCCATCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967141 197 + 50890351 CCCCCTCAAACCAAATTTCTCTACATGGGGGCTGTGGTCTCCCCAGGCCCCTCCCTCCACCCACCTCTCCTCTTTATGTTGCTGTTGATGACACTAAGGG--TAGGCATAGCTGGGAGGGCC----CTGTTGTCCTCCTTCCCTCTGA-GGGTGAGTGTCCCTCTGGCTGAGCCCCGCTCAGATCCCTGCTCACTCCATCCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542985 194 + 49145316 CCACCTCAAACCAAATTTCTCCACATCAGCCCTGTGGCCCTCCT--GTCCCCTCCCCTACCCGCCTCTCCTCTTCATGATGCTGGCGATGCTGCTGAGGG--TGGGTGTGCCTGGGAGGGCC----CCATTGTCCTCCTTCCCTCTGA-GGCCTGAGGCCGCTCTGGCTGAGCCTCCTTCAGA-CCCCGCTCCCTCCATCCCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3840725 128 + 145441459 -----------------CCCCTACATATGCCCT--------------------------CCTAACT----------------------TGTCACAGTGAG--TGAACATTACATGAAGGGTCATTGCTGGTATCCTGTTATGTGCTGACGAATGTG---CCTTATGTCTAA---CCATTC---CTTTTGTGCCCTTAATCCCAC i mm10.chr7 C 0 C 0 s canFam3.chr1 19704110 148 - 122678785 ACACCCC---------TCCTCTTCATTTACCCTGAGG--TCCCCAGGTACTCCTCCTCCTCCAC-------GTGGAAAATTCTGGTGACGGGGGCGAGGGAAGGGGCAGGAGTGGGAGGGCA----GTG----------------TGAAGGGTG-----------------GACTCCCTCAGAGCCCCTCTC-TTCCATCCCAG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55154705 22451 + 59248254 I a score=1888.000000 s hg38.chr19_GL949753v2_alt 253180 1 + 796479 C s panTro4.chr19 59193843 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56027812 1 + 60714840 C i ponAbe2.chr19 I 14595 C 0 s nomLeu3.chr10 102824475 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47249684 1 + 51301725 C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967338 1 + 50890351 C i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543179 1 + 49145316 C i calJac3.chr22 C 0 C 0 s mm10.chr7 3840853 1 + 145441459 C i mm10.chr7 C 0 I 4 s canFam3.chr1 19704258 1 - 122678785 C i canFam3.chr1 C 0 C 0 e macFas5.chr19 55154705 22451 + 59248254 I e rheMac3.chr19 3725921 0 - 64156825 C a score=102986.000000 s hg38.chr19_GL949753v2_alt 253181 43 + 796479 CCAGAGCTCTCCTGGGGGGCAGGGCCTGAGCTGA----------GCCTTTGAG s panTro4.chr19 59193844 41 + 63644993 CCAGAGCTCTCCTGGGG--CAGGGCCTGAGCTGA----------GCCTTTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56027813 42 + 60714840 CCAGAGCTCTGCTGGGG-GCAGGGCCTGAGCTGA----------TCCTTTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824476 42 - 106955855 CCAGAGCTCTCCTGGGG-GCAGGGCCTGAGCTGA----------GCCTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3725921 40 - 64156825 --AGAGCTCTGCTGGAG-GCAGCACCAGAGCTGA----------GTCTTTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55177156 42 + 59248254 CCAGAGCTCCCCTGGAG-GCAGGGCCTGAGCTGA----------GCCTTTGAG i macFas5.chr19 I 22451 C 0 s papAnu2.chr19 47249685 41 + 51301725 CCAGAGCTCTCCTGG-G-GCAGGACCTGAGCTGA----------GCCTTTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967339 41 + 50890351 CCAGAGCTCTCCTGG-A-GCAGGGCCAGAGCTGA----------GTCTTTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543180 42 + 49145316 CCAGAGCTCTCCTGGGG-GCAGGGCCTGAGCTGA----------GCCTTTGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3840858 33 + 145441459 TAAGAGCCCT----GAT-ACAGTGTTAATTGTAA----------GTCA----- i mm10.chr7 I 4 T 80938 s canFam3.chr1 19704259 47 - 122678785 CCCGTGCTCTTGTGGGC-ACAGGGCC----CTGAGGACAATGTGGCATATGA- i canFam3.chr1 C 0 C 0 a score=220599.000000 s hg38.chr19_GL949753v2_alt 253224 55 + 796479 CTCAGAGAGGACAGGGTCA-AGGCCCCCACCTGAGACCACGAGCTCCAGGGGCTCA s panTro4.chr19 59193885 55 + 63644993 CTCAGAGAGGACAGGGTCA-GGGCCCCCACCTGAGACCACGAGCTCCAGGGGCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56027855 55 + 60714840 CTCAGAGAGGACAAGGTCA-GGGCCCTCACCTGAGACCATGAGACGCAGGGGGTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824518 55 - 106955855 CTCAGAGAGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3725961 55 - 64156825 CTCAGAGAGGACAGGGTCA-GGGCCCTCACCTAAGACCACGAGCTCCAGGGGCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55177198 55 + 59248254 CTCAGAGAGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47249726 55 + 51301725 TTCAGAGAGGACAGGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967380 55 + 50890351 CTCAGAGGGGACAGGGTCA-AGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543222 55 + 49145316 CTCAGAGAGGACATGGTCA-GGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3759953 51 + 145441459 CTCTGAGATGTCAGGATCA-----CCTCACCTGAGACTGTGAGCTCCACAGGGGCA i mm10.chr7 T 80938 C 0 s canFam3.chr1 19704306 51 - 122678785 -----AGGAGACAGGGTCAGGGGCCCTCACCTGAGACCAGGATCTTCACGGGGACA i canFam3.chr1 C 0 C 0 a score=1054317.000000 s hg38.chr19_GL949753v2_alt 253279 411 + 796479 CTGGGGTGAGACAGCAGGTAGGGGTCGGAGTTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTAGGATATTCGTGTATTGATCTTAGACGGAGTGGGGCATCAGCTGCTCCCGCCTTGGTCAGAAGGAAAGTGTGGAACTGCCGCCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCTGGCTGCACTGAGATGAAGGGTGTGCCATGGATCTGTCCTGAAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GCTCTGAGCTGAGACCTCCCCA---GGCCTCTC--TAGGAGCctc--------tgtctctgttttct--ctgagtcttcccctccccacccatcccctgtctctctct--ct-- s panTro4.chr19 59193940 421 + 63644993 CTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTGTTGAGCTCTGTAAGTGGAGCCTAGACGCAGCGGGGCATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCTGCACCGAGAGGGAGGGTCTGGCATGGATCTGTCCTGGAGAGAAGAAGGTTGGGTGAGGGGCTGCCCCACCTT-GTTCTGAGCTGAGACCTCCCCACCAGGCCTCTCCCTGGGACCCTCAGTCtctctgtctctgttttct--ctcagtctccctgtccccgccca-cccctgtctctgtct------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56027910 417 + 60714840 CTGGGTTGAGACAGCAGGTAGGGTTTGGAGCTGAGTGAGCCATAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCAAGGGGAATTCAGCCTGGTTCTGCTGAGCTTGGTGCTCTGATCTCAGACGCAGCGGGGGATGGGCTGCCCCCTCCTTGATCAGAAGGAAAGTGTCAAACTGCCCCCATGACTAACACAGCAGGATCATGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCCCGGAGAGGAAGGGTCTGCCAGGGGTCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTT-GTTATGAGCTGAGACCTCCCCA---GGCCTCTCTCTGGGATTCTCAGTCTCTCTGCCTCTGCTTTGT--CTGAGTCTCCCC-TCCCCACCCA-CCCCTGTCTCTGTCT------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824573 415 - 106955855 CTGGGGTGAGTCAGCAGGTAGGGGTTGGAGTTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGAGGAATTCAGCCTGGTGCTGCTGAGCTTGGTGCTCTGATCTCAGACGCAGCGGGTGATGGGCTGCCCCATCCTTGGTCAGAAGGAAAGTGTCCATCCATCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACCATGGGGCCCCGCTGCACTGAGAGGGAGGGTCTGGCACGGATGTGTCCTAGAGAGAAGATGGATGGGTGAGGGGCCGCCCCACCTT-GTTCTGAGCTGATACCTCCTCA---GGCctctctctgggaccctcagtctctctgtctctgttttct--ctgagtctccccctccctgcccatcccctgtctct---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3726016 418 - 64156825 CTGGGGAGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTTACAGGACTCATGGGGAATTCAGCCTGGTACATGTGAGATTCATGCGTTGAGCTTAGATTCTGTGGGGGATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGTGGAACTGCCCCCGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCGCCGAGAGGGAGACCGTGTCATAGAACTGTCCTGGAGAGAAGAACGATGGGTGAGGGGCT--CCCACCTT-GTTCTGAGCTGACACCTCCCCA---GGCCTCTCTCTGGAACCCTCAGTCTCTCTGTCTCTGTTTTCT--CTGAGTCTCCCCCT-CCGGCTCATACCCTGTCTCTCTCCCT---- i rheMac3.chr19 C 0 I 17 s papAnu2.chr19 47249781 418 + 51301725 CTGGGGTGAGTCAGGAGGTAGGGGTTGGAGCTGAATGAGCCATAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGAAATTCAGCCTGGTATATGTGAGACCAGCGCTTTGATTTCAGACGCAGGGGGGCATCAGCTTCTCCCTCCTTGGTCAGAAAGAAAGTGTCCGTCCATCCCTGTGACTGACACAGCAGGGTCACTTTCTCTCCtgaggccaccgtggggcccggaTGCACTGAGAGGGAGGGTCTAGCCTGGGTCTGTCCTACAGAGAAGACAGATGGGTGAGGGACTGCCCCACCTT-GTTCTGAGCTGATACCTCCCCA---GGGctctctctgggaccctcagtctctctgtctctgttttct--ctcagtctccccct-ccctacccatccctgtatctgtct------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967435 415 + 50890351 CTGGGGAGAGACAGCAGGTAGGGGTTGGAGCTGTGTGAGCCGTAGCACCTGTAGGTCCCCTTGTGGGCTGACGTCACAGGACCCATGGGGAATTCAGCCTGGTACTTAGGCGCTCGGTGCTTTGATCTCAGACGCGGCGGGGGATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGTGTAACTCCCACCATGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCATGGGGCCCGGCAGCACCGAGAGGGAGACCGTGACGTAGAACTGTCCTGGAGAGAAGAAGGATGGATGAGGGGCT--CCCACCTT-GTTCTGAGCTGATACCTCCCCA---GGCCTCTCTCTGGAACCCTCAG--TCTCTGTCTCTGTTTTCT--CTGAGTCTCCCCCTCCCCGCCCATCCCCTGTCTCTGTCT------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543277 413 + 49145316 CTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTCCTTATGAGCTTGGTGCTTTGATTTCAGATACTGGGGGTGATGGGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTCCATCGGACTCTGTGACTGACACAGCAGGGTCACGTCCTCTCCTGAAGCCACCCTGGGGCCTGGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTGGAGAGAACAAGGATGGGTGAGGGGCTGCCCTGCCTT-GTTCTGAGCTGAGAACTCCCCA---GGCTTCTCTCTGGGACCCTCAG--TCTCTGTCTCTGTTT--T--CTGAGTCTCCCCCTTCCCACCGATTGCCTGTCTCTCT-------- i calJac3.chr22 C 0 C 0 s mm10.chr7 3760004 403 + 145441459 CTGGCAGATGACAAGAGGTAGAAAGATTAATCTTGAGCACCACAGCACCTGTAGATGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTTGATTTTAATCGCAGGGGTTGCTGGGCCGATCCCTCCTTGGACAGAATGAAAGTATCCACAGAGTCCATTGACCAACACAGCAGGCTCACGGTCTCTCCTGAGTGCACTGTGTAGTTAGGCTTCACTGAGAGGGAAGGAGTGATAGGGAGCTGTCCTAAAGAGAAGAGGCAT-GATGAGAGGCTAGCTT-CCTT-GTTCTGAGCTGGAATCACACAT---GACTCCATCCTGAGAACCTGGG--CCTCTGTCTCTTTTCTCTGACTGAG--------------CTCAACTCCTGTTCTCGTCT------ i mm10.chr7 C 0 I 6 s canFam3.chr1 19704357 382 - 122678785 CTTGGGTGTGATAACAGGTAGGGGGAGGTGTTGAATGAGCCATAGCACCTGTAGGTGCCCCTGTGGGCTGAGGTCACAGGACTCATGGAAAATTCCGCCTGGTACAGCCCAGAAGAGTATTTTGATCTAAGACGCAGTGGGGGATTGGCTGCCCCCTCCTTGGACAGAAGGAAAATATCCACAGAGCTCAGTGACTGACACAGCAGGGTCACATTCTCTCCTGGGGCCACAGTGGGTCCTGGCTGCACCTGGAGGGAGGGCGTGTAGGGGAACTGTCCTAGAGAGAGGAAGGGTGGGTGAGGGGCTGTCCAGCCCTAGTTCTGACCTGA---------A-------------------------------TCTCTCTGTGTCCT--CTGAGTCTCTCCCATC---CTCATCCCGTATTTCTGTCT----CT i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177253 0 + 59248254 C a score=21322.000000 s hg38.chr19_GL949753v2_alt 253690 22 + 796479 gtctctccctccctTGGGACCA- s panTro4.chr19 59194361 21 + 63644993 gtctctcCCTCCTTTGAGACC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56028327 21 + 60714840 GTCTCTCCCTCCCTTGGGACC-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102824988 20 - 106955855 gtctctccctccctTGGGAC--- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47250199 20 + 51301725 gtctctccctcccttgggaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967850 21 + 50890351 GTCTCTCCCTTCCTTGGTGCC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543690 13 + 49145316 --------CTCCCTTGGGACA-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3760413 20 + 145441459 GTCCACTGCTGCTTAGGATT--- i mm10.chr7 I 6 C 0 s canFam3.chr1 19704739 17 - 122678785 -----TCCCTCCCTGGAGACC-C i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177253 0 + 59248254 C e rheMac3.chr19 3726434 17 - 64156825 I a score=332581.000000 s hg38.chr19_GL949753v2_alt 253712 115 + 796479 CCCCCCGCCTCATCCCGGCCATCACTAATTGGATTCCCCCGGCAGGG-CCTGTGCAGAGTCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGTGATCAGGATGTCCAGGGG s panTro4.chr19 59194382 114 + 63644993 -CCCACCCCTCATCCTGGCCATCACCACCTGGGCTCCCCCAGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGTGATCAGGATGTCCAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56028348 114 + 60714840 -CCCACCCCTCATCCCGGCCATCACCATCTGGGCTCCCCCGGCAGGG-CCTGTGCAGAGCCTGTGTCCCTGACTGAACCCGCTG-GGCTCCTCACCTGAGATCAGGATGTCCAGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825008 114 - 106955855 -CCCACCCCTCATCCCGGCCATCACCACCTGGGCTCCCCCGGCAGGG-CCTGTGCAGAGCCTGGATCCCTGACTGAACCCGCTG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3726451 110 - 64156825 CCCCACCCCTCATCCCGGCCATCACCACCTGGGCTCCCCTGTCAGGG-CCTGTGCAGAGCCTGGGTCCCTGCCTG-----ACTG-GGCTTGTCACCTGAGATCAGGATGTCCAGGGG i rheMac3.chr19 I 17 I 27375 s papAnu2.chr19 47250219 115 + 51301725 ccccacccctcATCCCGGCCATCACCACCTAGGATCCCCTGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCACAG-GGCTCCTCACCTGCGATCAGGATGTCCAGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967871 114 + 50890351 -CCCATCCCTCATCCCGGGCATCACCACCTGGGCTCCCCTGGCAGGG-CCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTG-GGCTCATCACCTGAGATCAGGATGTCCAGGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543703 112 + 49145316 -CCCACCCCTCATCC-ACCCCTCACCACTTGGGCT-CCCTGGCAGGG-CCTCTGCAGAGCCTGGGTCCCTGACTGAACTGGCTG-GGCTCCTCACCTGAGATCAGGATATCCAGGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3760433 113 + 145441459 -CCTGTATCT-ATCCTGGCCATCAGCTTTCCAGCTCCCCCTTGAGAG-CCTGAGCAGAGGCTAGGTTCCTGACTGAGTCTGTTG-AGTTCTTCACCTGTGATCAGAATGTCCAGGGG i mm10.chr7 C 0 C 0 s canFam3.chr1 19704756 110 - 122678785 ---CACCTCCCAGGTTGGCCACCATCAGCTGGGCTTCCCTCACAGGGACCTGTGTAGAGTCTGGGGCTTTCCCTG----CACTGTGGCCCCTCACCTGCGACCAGGATGTCCAGGGG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177253 0 + 59248254 C a score=12415.000000 s hg38.chr19_GL949753v2_alt 253827 4 + 796479 GTCG s panTro4.chr19 59194496 4 + 63644993 GTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56028462 4 + 60714840 GTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825122 4 - 106955855 GTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3753936 4 - 64156825 GGCA i rheMac3.chr19 I 27375 C 0 s papAnu2.chr19 47250334 4 + 51301725 GTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967985 4 + 50890351 GTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543815 4 + 49145316 GTCG i calJac3.chr22 C 0 C 0 s mm10.chr7 3760546 4 + 145441459 GTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 19704866 4 - 122678785 GCCA i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177253 0 + 59248254 C a score=1616665.000000 s hg38.chr19_GL949753v2_alt 253831 479 + 796479 CTGGGGGCCGACCACTCGGAGGAGAGGTTGTATGCACCGTAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGAGCTGGCGAAGGTCACGTTCCCCCTCCTTGTACAGAAC-----------------------------------------------------AAATCTGTCATAGCCGACATCAGAGACACACTGGAGGGTCAGGCTTTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGCTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCGGTGCCTCACCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGCCCCAACATCATCCCACCTGGAACTGCCCTGAGACAC-GGCTGCTCCCCACCTGCCTGGAGACTCAGGGAGACTCA----------GGGA--- s panTro4.chr19 59194500 479 + 63644993 CTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGCAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGAGCTGGAGGAAGTCACGTTCTCCCTCCTTATACAGAAC-----------------------------------------------------AAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGATCTCCCCAGGGGCCACGACAGGACCTGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCATGGTTTCCAGGAGCCGACTCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCGGGGCCTCACCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGCCCCAACATCATCCCACCTGGAGCTACCCTGATACCC-GTCTGCTCCCCACCTGCCTGGAGACTCAGGGAGACTCA----------GGGA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56028466 468 + 60714840 CTGGGGGCTGACCACTCGGAGGAGACGTTGCGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGAGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTTCTCCCACCTTATACAGAAC-----------------------------------------------------GAATCTGTCGTAGCCGACATCAGAGCCACTCTGGAGGGTCAGGCTCTCCCCAGGAGCCACAACAGGGCCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCATGGTTTCCAGGAGCCGACCCTCAGGCTTTCCCACAAATCCT-CCTCTCC---------CCCGGGGCCTCATCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGCCCCAACATCATCCCCCCTGGAGCTGCCCTGAGACGC-GGCTCCTCCCAACCTGCCT----------GGAGACTCA----------GGGA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825126 469 - 106955855 CTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCATAAGAGCGTCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTTACGTTCTCCCTCCTTGTACAGAAC-----------------------------------------------------AAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGCGATGGCTTCTTAGAAACACCTGGGAAAATGTGGTCATGGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCGGGGCCTCACCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGCCCCAACATCATCCCCCCTGGAGCTGCCCTGAGAGGC-GGCTCCTCCCCACCTGCCT----------GGAGACTCA----------GGGA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3753940 521 - 64156825 CTGGGGGCCGACCACTGGGAGGAGAGGTTGTGTGCACTGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGAGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAGGTCACCTTCTCCCTCCTTGTATAGAACAAATCTGAGCCAGGGCGCTGGAGGAAGTCACATGCCCCCTCCTTATACAGAGAGAATCTATCATAGCCAGCATCAGAGCCACACTGGAGGGTCAGACTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCTGGGAAAAGGTGGTCACAGTTTCTAGGAG-CGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCTGGGCCTCACCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCTCTCTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAGACGC-GGCTCCTCCCCACCTGCCC----------GGAGACTCA----------GGGA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55177253 446 + 59248254 CTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTGGGAGTGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGTGCTGGAGGAAGTCACGTCCCCGCTCCTTGTATAGAGC-----------------------------------------------------GAATCTGTCGTAGCCGACATCAGAGCCACACTGGAGGATCAGCTTATCCCCAGGGGCCACGACAGGACCCGGCTGCTCTGAGAGTGACAGCTTCTTAGAAACACCTGGGAAAAGGTGGTCACGGTTTCCAGGAG-CGACCCTCAGGCTTCCCCACAAACCCTCCCTCTCC---------CCCTGGGCCTCACCACTGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAGACGT-GGCTCCTCCC--------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47250338 468 + 51301725 CTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCATGGGAGCCCCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAAAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGCCACGTTCTCCCTCCTCGTACAGAGC-----------------------------------------------------GAATCTGTCATAGCCAACGTTAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGACAGTGACGGCTTCTTAGAAACGCCTGGGAAAAGG-GGTCACAGTTTCCAGGAGCCGACCCTCAGGCTTCCCCACaaaccctccctctcc---------ccctgggCCTCACCACTGCTCATCTTCCT--GTGTCTCTGGCC----------CCAGCAGCCCTGAGCCCTCTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAGACGC-GGCTCCTCCCCACCTGCCT----------GGAGACTCA----------GGGA--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46967989 468 + 50890351 CTGGGGGACGACCACTCGGAGGAGAGGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCATGGGAGCGGCTCACAAGGCCCAGGGGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGCGCGCTGGAGGAAGTCACGTTCTCCCTCCTTGTACAGAAC-----------------------------------------------------GAATCTGTTGTAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCGAGGGCCACGACAGGACCCGGCTGCACTGAGAGTGACGGCTTCTTAGAAACGCCTGGGAAAAGGTGGTCACGGTTTCCAGGAG-CGACCCTCAGGCTTCCCCACAAACCGTCCCTCTCC---------CCCTGGGTCTCACCACGGCTGATCTTCCT--GTGTCTCTGGCC----------CCAGGAGCCCTGAGCCCTCTCGTCCCAACATCATCCCACCTGGAGCTGCCCTGAGACGC-GGCTCCTCCCCACCTGCCC----------GGAGACTCA----------GGGA--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543819 464 + 49145316 CTGGGGGCCGACCACTTGGAGGAGAGGATGTGGGCACCGGAGCATCTGTACTGGCCCCCGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGTCTGCCGGCCAGGGCGCTGGAGGAGGTCAGGTCCCCAGTCCTTGTACAGAGT-----------------------------------------------------GAACCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCCTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTCAGAAACACCTGGG-AAAGGTGGTCATGGTCTCCAGGAGCCGACCCTCAGGC-TCCTCACAAATCCTCCCTTTCC---------CC--GGGCCTCACCACTGCTGATCTCCCT--GTGTCTCTGG-C----------CCAGGAGCCCTGAGCCCTCTTACCCCAACATCGTCCCACCTGGAGCTATCCTGAGACTC-GGCTCCTCCCCACCTGCCC----------GGAGACTCA----------GGGA--- i calJac3.chr22 C 0 C 0 s mm10.chr7 3760550 469 + 145441459 CTGGAGGCTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACTCACATAGCCAAGTGTGAAGTTGGCCACATAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCTTGTGCAGAGC-----------------------------------------------------AAATCTGTCATAGTTGATGTCAGAGAAACACTGCAAGGTGAGGGTCATTCCAGGGTCCAGGATATGGCCTTGGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAG--AGGGAAGGTGACAG---CTAGAGACTGAGGTTTGGTTCTTACCAAACACCTTTGCCCTCC---------TCTCCGGCC---CTTGTGCATGTCCCCTC--TTCTTTCCAGTCAGGGCAGTGTTCGAGAACACAGG---CTCTCCGTTTAGTCCTTCTCTACCTGCAACTCAGCAGAGGGGCAGGCCTGTGGTAAAGGGCTT----------AGGGCCTCA----------GAAA--- i mm10.chr7 C 0 I 1835 s canFam3.chr1 19704870 475 - 122678785 CTGGAGGCTGACCACTGGGAGGAGAGGTTGTGTCCACCGTAGCATGTGTACCGGCCCCTGTGGAAGGGTCCCACTGGGCCCAGGGGGAAGTCTGCCCCAGAGAGCCCAGCCTGGGACTGCCAGCCATGACGATGAAGAAGGTCACGTGCCCCCTCCTTGGACAGAAC-----------------------------------------------------GAATCTGTCATAGCTGACATCAGAGAGACACTGGAGGGTCAGATTCTGTCCAGAGGTCACAACAGGGCTCTGCTGGATCCGGAGGGAGGGCTTCCCCAACACACCTGGGAAAGACCAGCCGTGGATTGTAGGGGCTGA----------TTACCTCAAACCTCCCTTCTCCTGTCCTAATCCCCAGGTCTTA----TGTCCCTCACCCTTGGAGTCTCTGA-C----------CTGTGACCCCTGTGGTCCCCTGACCCACCCTCA---CATCTGGGGCTTCCCTGGTAGGT-TGGCCCCTGAAACTTGTCT----------GGTGCCTCAAACCATGGATGGGATGA i canFam3.chr1 C 0 C 0 a score=437323.000000 s hg38.chr19_GL949753v2_alt 254310 138 + 796479 ACTCCAGACAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGG---AGAGTTCAAGTCATAACCATAGCACCTGTGCGACCACCTGCGATTCGGGCTCACGGGGCCC s panTro4.chr19 59194979 138 + 63644993 ACTCCAGGCAATGCTGTGAATTTCTCACCTGGCACCAGGAGCTCCAGGAGACCACTGGGTAGAGACCACACATAGGG---AGAGCTCCAGTCATAACCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56028934 138 + 60714840 ACTCCAGGCAATGCTGTGAATTTCTCACCTGGAACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGG---AGTGCGCGAGTCATAACCATAGCACCTGTACAACCACCTGCGACTTGGGCTCACGGGGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825595 138 - 106955855 ACTCCAGGCAATGCTGTGAATGTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGG---AGAGCGCGAGTCATAAGCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3754461 138 - 64156825 GCTCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGG---AGAGCGTGAGTCATAACCATAGCACCGGTACGACCACCTGCGACTCGGGCTCACGGGGCCC i rheMac3.chr19 C 0 T 27428 s macFas5.chr19 55177699 113 + 59248254 -------------------------CACCTGAGACCTCGAGCTCCAGGGGCTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGC-TGAAT--GAGGCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47250806 138 + 51301725 GCTCCAGACAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGG---AGAGCGTGACTCATAACTATAGCACCGGTACAACCACCTGCGACTCGGGCTCACGGGGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46968457 138 + 50890351 ACTCCAGGCAACGCTGTGAATTTCTCACCTGAGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGG---AGAGCGTGAGTCATAACCATAGCACCGGTACGACCACCTGCGACTCGGGCTCACGGGGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544283 138 + 49145316 TCTCCAGACAATACTATGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGG---AAAGCTTGAGTCATAACCATAGCACCTGTACGTCCACCTGCGACTCGGGCTCACGGGGCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3762854 137 + 145441459 ATTCTATGGAAGGCTGAG-GTTCCTCACCTGAGACCAGGAACTCCACGGATTCACTTGGAGCTGAGAACACATATGG---TCTATTCCTGTCATAACTGTAGCATCTGCATATCCATCTCTGGTTGGGGGTCACAGGGCCC i mm10.chr7 I 1835 C 0 s canFam3.chr1 19705345 127 - 122678785 AAACCAGGC-----------TTTCTCACCTGAGATCAACAGCTCCAAGGGGTCACTGGGGAGTGACCACTCCTGGGG---GGTGTTGCTGTAATAACCATAGCATCTGAATGTCCACATGAGGCTGGGGATCACAGGCCCC i canFam3.chr1 C 0 C 0 a score=523024.000000 s hg38.chr19_GL949753v2_alt 254448 182 + 796479 ACGGAGAAGATGGCGCGGGACGACC---CACGGGCATGGGGCTGGG------AGTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCGCCAAATGCCACCTGTGACTCACACTGGAGGGTCACCCTTCCTCCTGAGGTCACCACAGGGCTGGGCTGGGCTGAGAGGGTGGGTTT s panTro4.chr19 59195117 182 + 63644993 ACGGAGAAGATGGCCCAGGACCACC---CAAGGGTATGGGACTGGG------AGTTCACGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAGTGAAGCCACCAAATGCCAGCTGTGAGCCACACTGGAGGGTCACGTTCCCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTAGGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029072 182 + 60714840 ATGGAGAAGATGGCGCGGGACGACC---CACGGGCATGGGGCTGGG------AGTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCGTCAAATGGCACCTGTGAGTCACACTGGAGGATCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825733 182 - 106955855 ACGGAGAAGACGGCCTGGGACCACC---CACGGGTACGGGGCTGGG------AGTTCAGGCATTGTGGGTGTCCATCTTCTCCTTCCTTACACAGAATGAAGCCATCAAATGCCACCTGTGAGACACACTGGAGGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3727171 182 - 64156825 ACGGAGAAGACGGCCCGGGATGACC---CATGGGCATGGGACTGGC------AGTTGAGACGTTGTGGGTGCTCATCTTCTCCTTCCTTACACAGAACGAAGCCATCAAATGCCACCTGTGAGTCACACTGGAGGGTCACGTTCCGTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT i rheMac3.chr19 T 27428 C 0 s macFas5.chr19 55177812 179 + 59248254 ATGGGAAATTCAGCCTGGTAC------------ATATGAGACCGGCGCTTTGATTTCAGACTCAGGGGGGCATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTCCGTCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCT i macFas5.chr19 C 0 I 1024 s papAnu2.chr19 47250944 182 + 51301725 ACGGAGAAGACAGCCCGGGATGACC---CACGGGTACGGGGCTGAG------AGATCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACAGAATGAAGCCATCAAATGCCACCCGTGAGTCACACTGGAGGGTCACGTTCCCTCCTGAGGCCAccacagggctgggcagggctgagaGGGTGGGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46968595 182 + 50890351 ACGGAGAAGACGGCCCAGGACCAGC---CATGGGCGTGGAAGTGGG------AGTTGAGACGTTGTGGGTGCTCATCTTCTCCTTCCTTACACAGAATGAAGCTGTCAAATGCCACCTGTGAGACACACTGGAGGGACACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544421 176 + 49145316 ACGGAGAAGATGGCCCGGGATGACC---CAGGGGTACGGGGCTGGG------AGCT---GCATGGTGGGTGTTCATCTTCT---TCCTTACACAGAATGAAGCCATGAAATGGCAACTCTGAGCCACACTGGAGGGTCACGCTTCTTCCTGGGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3762991 185 + 145441459 ACAGAGAACAGGGCGTGGTACTTCCTTGTAGAGTAGTTATACTGTG------AGTCTTGTCTCCATATGAGATTCTGTGGTCCTTCTACAGTCAAAATGAACCTGTGATAGCTCTGCGAGGACTCACACTGGAGGGTGACATACCCTCCTGAAGTTACCACTGGGCTGGCCTGGGCTGAAAGGCTGGGTGT i mm10.chr7 C 0 C 0 s canFam3.chr1 19705472 182 - 122678785 ACAGGGAACAGGGCCCAGAACCTCA---TACTAGGTGCTTGCTGGG------AGTTCCGGGTCCAGAACAGCTGGCGTTGTCCTTCTTTCATCAGGACGAACCTGTGGAATCCTGTCCATGATACACACTGGAGGGTCACATTCCCTCCTGAGGGCACGATAGAGCTGGGCAGGACTGAGAGGCTGGGTTT i canFam3.chr1 C 0 C 0 a score=224728.000000 s hg38.chr19_GL949753v2_alt 254630 85 + 796479 TGGGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCATCCCCAGGGCTGGGCTGTGAGAG s panTro4.chr19 59195299 85 + 63644993 GCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCATCCCCAGGGCTGGGCTGTGAGAG i panTro4.chr19 C 0 I 11139 s ponAbe2.chr19 56029254 85 + 60714840 GCTGTAGGCTCCTAGAAGAGAAGGAGGCACCGTGTTAAATGGGGCTCACA-CCTCCCACATCATCCCCAGGGCTGGGCTGTGAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102825915 85 - 106955855 CATGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACGTCATCCCCAGGGCTGGGATGTGAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3727353 84 - 64156825 GCTGTAGGCTCCTGGGAGAGAAGGCGGCACCGTGTTAAATGGGT-TCCCA-CCTCCTGCATCATCCCCAGGGCTGGGCTGTGAGAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47251126 84 + 51301725 GCTGTAGACTCCTAGGAGAGAAGGAGGCACAGTG-TAAATGGGTCTCACA-CCTCCTGCATCatccccagggctgggctgggagag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46968777 83 + 50890351 TCTGTAGGCTCCTGGGAGAGAAGGAGGCACCGTGTTAAATGGG--ACTCA-CCTCCCACATCATCCCCAGGGCTGGGCTGTGAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544597 84 + 49145316 CCTGTAGACTCCTAGGAGAAAAGGAGGCCCCGTGTTAAGTGGGGCTCACA-CCTCCCACATCAT-CCCAGGGCTGGGCTGTGAGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3763176 75 + 145441459 CCAGTAGTCTTCTAGGAGAGAAGGAGGAGTCA-GTTAAATG-----TCCG-CAGGCCTCATTATTCTC----CTAGGCTCTGAGGT i mm10.chr7 C 0 I 13 s canFam3.chr1 19705654 85 - 122678785 GCTGTGCATCCCTAGGAGAG-GGGAGGGGCTGTGTTACATGGGGCTCAGATCCCCCCACATGATCCCCAGGGATGGGCTGTGAGAG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177991 1024 + 59248254 I a score=380794.000000 s hg38.chr19_GL949753v2_alt 254715 147 + 796479 GGAGACACCCCTGAGAGCC----TCCTTCCTGA-GGGCAGAGCCTGGGGCTGGGATCCCTGAGTGTCCTCTCACCTGTCATCACCAGCACCAGGGGGTCACTGAGCTCAGACCACCGAGC---GCGGCTGTAATACTGACAGCCATATCGCCCTG s panTro4.chr19 59206523 151 + 63644993 GGAGATGCCCCTGAGAGCCAACCCCCTTCCTAA-GGGCAGAGCCTGGGGCTGGGAGCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGATCACTGGGCTCTGACCACTGAGA---GCGGCTGTAATACTGACAGCGATACCACCCTG i panTro4.chr19 I 11139 C 0 s ponAbe2.chr19 56029339 147 + 60714840 GGAGACACCCCTGAGAGCC----TCCTTCCTGA-GGGCAGAGCCTGGGGCTGGGACTCCTGAGTGTCCTCTCACCTGTCATCACCAGCTCCAGGGGGTCACTGGGCTCTGACCACCGAGT---GCGGCTGTAATACTGACAGCGATACCGCCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826000 151 - 106955855 GCAGACGCCCCTGAGAGCCGATCCCCTTCCTGA-GGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGAGCTCTGACCACCACCG---ATGACTGTAATACTGACAGCGATACCGCCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3727437 142 - 64156825 GGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGGCAGAGCCGGGGA---------CTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGCCTGC---AGGGGTCTCAAAGTAGCAGCGGTATCGCCCTG i rheMac3.chr19 C 0 I 27481 s papAnu2.chr19 47251210 151 + 51301725 ggagacGCCCCTGAGAGCCGACCCCCTTCCTGA-GGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGtcgctgtgctctgaccaccaaCT---GTGGCTGTAATACTGACAGCGATACCGCCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46968860 153 + 50890351 GGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGACAGAGCCTGGGGCTGGGACC-CTGAGTGTCCTCTCACCTGTCACCATCAGATCCAGGGGGTCGCTGGGCTCTGACCTGCCTTCAATGTAGCTACCATAGTTGCAGCGATACCGCCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544681 150 + 49145316 GGAGATGCCCCTGAGTGCAGAGCCCCTTCCTGA-GGGCAGATCCTGGGGCTGGGACCCCTGAGTG-ACTCTCACCTGTCACCACCAGCTCCAGGGGATCACTGGGCTTGGACCAGCCAGA---GTGGCTGTAATACTGACAGCGATACTGCCCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3763264 151 + 145441459 GTGGGCATTCCTGTTAACAGAGCCAAGTCTGGACAGTTATAACCTGAGGCCTAGGATCCTGTGTGT-CTCTCACCTGTCACCACCAGCTCCAGGAGGTCACTGTAGCCTGATGATTCATC---CTGGGTGCTGTAGGAACATCGATATTGACCTG i mm10.chr7 I 13 C 0 s canFam3.chr1 19705739 148 - 122678785 GGCGACA-TCCTGAGAGCAGACCCTCTTCCTGA-GGGCATAGCCTGGGCTGGAGAC--CTGAGTGGGCTCACACCTGTCACCACCAGCTCCAGGGGGTCACTGGGATTAGACCAGGCAGT---GGTGATTCTATAGTAACAGTGATATTGTCCTG i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177991 1024 + 59248254 I a score=179492.000000 s hg38.chr19_GL949753v2_alt 254862 88 + 796479 TGTGTTCCCAGGTGATGGATGGGATGTGGAACTGGCCGTTCTTCACAAGCTCTGGTCGTATCCGTGTAATCCAAGATGCTGATTT-------TTT s panTro4.chr19 59206674 88 + 63644993 CGTGTTCCCAGGTGATGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTGTGGTTGTATCCGTTTAATCCAGGATGCTGATTT-------TTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029486 88 + 60714840 TGTGTTCCCAGGAGATGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCTAGTCGTATCCGTGTAATCCAGGATGCTGATTT-------TTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826151 88 - 106955855 CGTATTCCCAGGTGATGGATGGGATGGGGAACTGGCCCTTCTTCACTAGCTCTGGTCGTATCTGGTTAATCCAGGATGCTGATTT-------TTT i nomLeu3.chr10 C 0 I 102 s rheMac3.chr19 3755060 88 - 64156825 TGTGTTCCCAGGTGATGAATCCAATGGCGAAATAGCCCTTCTTGACAAGCTCTTGTCGTATCCGTCTAACCCAGGATGCTGTTTT-------TTT i rheMac3.chr19 I 27481 C 0 s papAnu2.chr19 47251361 88 + 51301725 CGTCTTCCCAGGTGATGGATGGGATGGGGAACTGGCCCTTCTTCACAAGCTCTGGCCGTATCAATGTAATCCAGGATGCCGATTT-------TCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969013 88 + 50890351 CGTGTTCCCAGGTGATGGATGCAATGGGGAAATAGCCCTTCTTGACAAGCTCTTGTGGTATCCGTCTAACCCAGGATGCTGGGTT-------TTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544831 88 + 49145316 CGTGTTGCCAGGCGATGGACTGGATGGGGAACTGGCCCTTCTTCACAAGCTCCCGTGGGATCCATGTAATCCAGGATGCTGATGC-------TTT i calJac3.chr22 C 0 C 0 s mm10.chr7 3763415 86 + 145441459 CATTACTCAGGTCTACATTTGAAAGTGAGAATTCAGCCTTGTTTTCTGGCT---------TCTGTTTGTTCTTTGTTACGGTTTTATATAGCTTT i mm10.chr7 C 0 I 2 s canFam3.chr1 19705887 88 - 122678785 CATGTACATCTGTCATGTGTGTGATGGAGAACTTGGCCTTGTCCTTGAACTCCAGTTCAGGCTGTCTGTTCCAGGTCCCTGAGTA-------TCT i canFam3.chr1 C 0 C 0 e macFas5.chr19 55177991 1024 + 59248254 I a score=305802.000000 s hg38.chr19_GL949753v2_alt 254950 142 + 796479 CTCCCTATATAGACGGTACTCCTGGGCTTCAAGGCTCCCCTGACAACTGAGGGTGACGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCACAGG-------------------------------GTGGGCTTGGGGATGGTCCCTGGAAGGAAATCAAAGGTCAGA s panTro4.chr19 59206762 142 + 63644993 CTCCCTATATAGATGGTTCTCCTGGGCTTCAAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCTGAGG-------------------------------GTGGGCTTGGGGAGGGTCCCTGGAAGGAAATCAAAGGTAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029574 142 + 60714840 CTCCCTATATAGACGGTACTCCTGGGCTTCAAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGG-------------------------------GTGGACTTGGGGAGGGGCCCTGAAAGGAAATCAGAGGTCAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3755148 173 - 64156825 TTCCCTTTGTAGACGGTAGTCCTGAACCTGAAGGCTCCCCTGACACCTGAGGGTCACGGGACTTCCCTCGCTGATCACAGACCCTGGCTCAGCCCAGAGGGTGGATCATAGACCCTGGCTCAGCCCAGAGAGTGGGCTTGGGAAAGGTCCCTGGAAGAAAATCAGAGATCGGA i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47251449 142 + 51301725 CTCCCTATATAGACGGTACTCCCGGGCTTCAAGGTTTCCCTGACACCTGAGGGTCACGGGACTCCCCCGGGTGATCACACGGTCTGGCTCAGCCCAGAGG-------------------------------GTGGGCTTGGGGAGGATTCCTAAAAGGAAATCAGAGATCGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969101 142 + 50890351 TTCCCTATATAGACGGTACTCCTGAACCTGAAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTCGCTGATCACAGACCCTGGCTCAGCCCAGAGA-------------------------------GTGGGCTTGGGAAGGGTCCCTGGAAGGAAATCAGAGATCGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544919 142 + 49145316 TTCTTTATATAGATGATACTCCTGGGCTTCCTGGTCCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGTGACCACAGAGCTTGGCTCAGCCCAGAGG-------------------------------GTGGGTGTGGGGAGGGTCCCTGGCAGGAAATCAGAGGTCAGA i calJac3.chr22 C 0 C 0 s mm10.chr7 3763503 137 + 145441459 ATCTTTATAGAGGCGGTACTCATTGGCTCCAATTGTCTCCTCACACAAGAAGGTCACCTTAGTCCTTCTGGAGACCACAGAGTCTGGCTCTACTCTGAGG-------------------------------ATAGGCTTAGGGAGGGACCCTGCAAGTAA--CAGAGCAA--- i mm10.chr7 I 2 C 0 s canFam3.chr1 19705975 141 - 122678785 TTCTTTATACAGGAGGTACTCTTGGGCCTTCAGGCTCCCCTGACACCAGATGGTCACAGGTGCCTCCCAGGGGACCACAGAGCCTGGCTCAGCCCAGATG-------------------------------GTGGGTTTGGGGAGGGTCCCTGGAAGGAAA-CAGAGGCTGCG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I e macFas5.chr19 55177991 1024 + 59248254 I a score=89069.000000 s hg38.chr19_GL949753v2_alt 255092 42 + 796479 TTCGAAG--TCATTT----CCCACCCAA-CAGATCTCAGCTCTCAGCCC s panTro4.chr19 59206904 42 + 63644993 TTCTAAG--TCATTT----CCCACCCAA-CAGTTCTCAGCTCTCAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029716 42 + 60714840 TTCTAAG--TCATTT----CCCACCCAA-GAGATCTCAGCTCTCAGTCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3755321 42 - 64156825 TTCTAAG--TCATTT----CCCACCCAA-CATATCTTAGCTCTTGGCTG i rheMac3.chr19 C 0 T 27512 s macFas5.chr19 55179015 42 + 59248254 TTCTAAG--TCATTT----CCCACCCAA-CAGATCTCAGCTCTTGGCTG i macFas5.chr19 I 1024 I 1 s papAnu2.chr19 47251591 42 + 51301725 TTCTAAG--TCATTT----CCCACCCAA-CAGATCTCAGCTGTTGGCTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46969243 42 + 50890351 TTCTAAG--TCATTT----CCCACCCAA-CAGATCTCAGCTCTTGGCTG i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45545061 46 + 49145316 TTCTAAG--TCATTTACACCCAACCCAA-CAGATTCCAGCTCTCAGTCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3763640 43 + 145441459 --CTAGGACTCAGGA----CAAACACACTCAGATTGCAGTCCTTAACCC i mm10.chr7 C 0 I 1 s canFam3.chr1 19706116 42 - 122678785 TCACAAG--ACCCTT----CCCACCCCC-AATATCCAAACCCCCAGAGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=592152.000000 s hg38.chr19_GL949753v2_alt 255134 221 + 796479 AGGACCCTCCAGATGCCCCCATCAGTCAGTCCAGAACTTCTAATCCCCATCCCCA---GCTGCACGGAGGTGGCCCCTTGTCCCCAGTGAGGAGGAGGGACCT--GGGAGAGCTGGGGACAGACTCACCTGTCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCCCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCT s panTro4.chr19 59206946 220 + 63644993 AGGACCCTCCAGATGCCCCCATCAGTCAGCCCAGAACTGCTATTCCCCATCCCCA---GCTGCACAGAGGTAGCCCCTTGTCTGCAGTGATGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACATGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCTTGTGAGGAATTTG-CCCCTGAAGTCTGAGCAGGTCCTCCCCTCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029758 222 + 60714840 AGGACCCTCCAGACACCCCCATCA-TCAGCTCAGAAGTGCTATTCCCCATCCCCAGCTGCTGCACGGGGGTGACCCCTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTTACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCTTGTGAGAGATTTG-CCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3727851 219 - 64156825 AGGACCCTCCAGATGTCCCCATCAGTCA-CCCAGAACAGC-GATCTCCGCCCCCA---GCTGCCCGGGGTTGGGTCTTTGTCCCCAGTGAGAAGGAGGGACCT--GGGAGAGCTGGGGACAGACTCACCCGCCTGCACGTGGGTCCTGGGGCCCAGACTCAACCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCCGAAGCCTCAGGAGTTCCTCTCCTCCCT i rheMac3.chr19 T 27512 I 27514 s macFas5.chr19 55179058 220 + 59248254 AGGACCCTCCAGATGCCCCCATCAGTCAGCCCAGATCTGCTAATCCCCGTCCCCA---GCTGCACAGAGGTGGCCCCTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGCGGGTTCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTG-CCCCTGAAGCCCGCGCAGGTCCTCCCCATCCT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47251634 220 + 51301725 AGGACCCTCCAGACACCCCCATCAGTCAGCCCAGATCTGCTATTCCCCGTCCCCA---GCTGCACGGAGGTGGCGCCTTGtccccagggaggaggagggacct--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCGGTGAGAGATTTG-CCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46969286 220 + 50890351 AGGACCCTCCAGACGCCCCCATCAGTCAGCCCAGATCTGCTATTCCCTGTCCCCA---GCTGCACGGAGGTGGCCCCTTGTCCCCAGTGAGGAGGAGGGAACT--GGAACAGCTGGGGACAGACTCACCTGCCTGCACGCGGGTCCTGGAGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTG-CCCCTGAAGCCTGAGCAGGTCCTCCCCTCCCT i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45545107 214 + 49145316 AGGACCCTCCAGA--CCCCCATCAGTCAGCCCAGAACTGCTGTTCCCC-TCCCCA---GCTGCACGGGGTGGG--CCTTGTCCCCAGTGAGGAGGA-AGACCT--GGGCCAGCTGGGGACGGACTCACCTGCCTGCATGTGGGTCCTGGGGCCCAGACTTAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTG-CCCCTGAAGCCTGAGCAGCTCCTTCCCTCCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3763684 207 + 145441459 ATGACATTTCTACCACCCACAGGA-CTATCACACAGGTGGTGTTTTCCACCATCA----CAGCCCAGGCATAGCTCCTGGAT----ATGAAGAAAAGAGCATTTCAGGTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGAGGCTCAGAGTCAGTCCTGGAAGAGAGTCCTTTGTAAGAGATTTG-TCCCT-AAGGCTGAGGAAGTCTGC-------- i mm10.chr7 I 1 C 0 s canFam3.chr1 19706158 202 - 122678785 GGGACCCTCTC--------------TCAGCCCAGAGCTGCTGATCTCCTTCCTCC----CTGCCTGGTGGGTGTTCTCTGTCCCCAGTGAGGAGGTGGGAG-T--GGGATCCCTGGGGACAGACTCACCTGCCTGCACTTGGGTCCTGGAGCCCACACTCAGCCCTGGAAGAGAGT-CCCTGTGAGAGGTTTG-CCCCA-AATCCTGAACAGAACCCCTCCTCTCC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=214317.000000 s hg38.chr19_GL949753v2_alt 255355 86 + 796479 GGGATCTTTGTGAGCCCCTGGGGTCTCCTTAGGGACCAGAGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAAGCTCCCCTCT- s panTro4.chr19 59207166 86 + 63644993 GGGATCTTTGTGAGCCCCTGGAGTCTCCTTAGGGACCAGAGTTTGGCTGTGGAGTGAGGTCCCTCCTAG--GTTAGAAGCTCCCCTCT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56029980 86 + 60714840 GGGATCTTTGTGAGCCCCCGGGGTCTCCTTAGGGACTAGAGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAAGCTCCCCTCC- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3755584 86 - 64156825 GGGATCTTTGTGATCCCCTGGGGTCTCCTTATGCGCCAGAGTTTGGCTGTGGGGTGAGGGCCCTTCTAG--GTTAGAATTAAACCTGG- i rheMac3.chr19 I 27514 T 27514 s macFas5.chr19 55179278 86 + 59248254 GGGATCTTTGTGAGCCCCTGGGGTCTCCTTATGCATCAGAGTTTGGCTGTGGGGTGAGGTCCCTTCTAG--GTTAGAATCTCCCCTCC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47251854 83 + 51301725 GGGATCTTTGTGAGCCCCCGGGGTCTCCTTATGCACC---GTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAATCTCCCCTTC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969506 86 + 50890351 GGGATCTTTGTGAACCCCTGGGGTCTCCTTATGCACCAGAGTTTGGCTGTGGGGTGAGGCCCCTCCTAG--GTTAGAATCTCCCCTCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545321 84 + 49145316 GGGGTCTTTGTGAGCCCCTGGGGTCTCCTTATGGACC--AGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAATCTCCCCTCC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3763891 87 + 145441459 -AGAAACATCTGAGACCCTGGGGTTTCCTTTTGGGTGAGTGCTGGTCTACAGGCCATGATCATTTCCAGACATCAGTATCCCCTCCCC- i mm10.chr7 C 0 C 0 s canFam3.chr1 19706360 83 - 122678785 ATGAGCCCCCTGAG--CCTGGGATCT-CTGACAGGCCAGGGCCTGGCTGTGGGGC-AGGTCCCTCCCAG--AGTAAGGCATTCCCTCCC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=181301.000000 s hg38.chr19_GL949753v2_alt 255441 56 + 796479 CTCTTCAAATCTCACCGAGACAGATCAGGACTGTGACGAT---GGGGGTCATGG-CGTCT s panTro4.chr19 59207252 56 + 63644993 GTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGAT---GGGGGTCATGG-CGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030066 56 + 60714840 CTCTTCAAATCTCACCGAGACAGATCAGGACCATGAGGAT---GGGGGTCATGG-CGTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3728156 56 - 64156825 CTCTTCAAACCTCACCGAGGCACGTCAGGACTGGGAGGGT---GAGGGTCATGG-CGTCA i rheMac3.chr19 T 27514 C 0 s macFas5.chr19 55179364 56 + 59248254 CTCTTCAAATCTCACCGAGACAGATCAGGACCGTGAGGAT---AAGGGTCATGG-CGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47251937 56 + 51301725 CTCTTCAAATCTCACCGAGACAGACGAGGACCGTGAGGAT---GGGGGTCATGG-CGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969592 56 + 50890351 CTCTTCAAATCTCACCGAGACAGACCAGGACCGTGAGGAT---GGGGGTCATGG-CGTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545405 56 + 49145316 CTCTTCAAATCTCACCGAGACAGATCAGGACCATGAGGAT---GGGGGTCATGG-CGTCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3763978 59 + 145441459 CTCTTCACATCTCACCAAGACAGAGCAGGGCTGTGAAGGTGCAGGAGGACATGG-CAACt i mm10.chr7 C 0 I 80993 s canFam3.chr1 19706443 57 - 122678785 CTCCTTGGCTCTCACCTAGACAGAGCAGAACCGTGAGGGC---GGGGGTCATGGCCGTCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=28020.000000 s hg38.chr19_GL949753v2_alt 255497 10 + 796479 CCTCCCACTG- s panTro4.chr19 59207308 10 + 63644993 CCTCCCACTG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030122 10 + 60714840 CCTCCCACTG- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3728212 10 - 64156825 GCTCCCACTG- i rheMac3.chr19 C 0 I 27514 s macFas5.chr19 55179420 10 + 59248254 CCTCCCAACG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47251993 10 + 51301725 CCTCCCACTG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969648 10 + 50890351 CCTCCCACTG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545461 10 + 49145316 CCTCCCACTG- i calJac3.chr22 C 0 C 0 s mm10.chr7 3845030 10 + 145441459 CCCCTCAGTG- i mm10.chr7 I 80993 I 2 s canFam3.chr1 19706500 11 - 122678785 CCTCTCTCTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=591608.000000 s hg38.chr19_GL949753v2_alt 255507 282 + 796479 CCCTGCTCTGCGGATGGATGAGCCCTCGG-----TGCTGGCGGGAC--AG--AGACACACAGAGAGAAATAGCCTCCCCTCCTTCCCACCCTGTGTGGACACTCAGAGGCTGGGTC---CTTCTCA---TGGGGTGTTGTC----ATCTGCAGCCACACAAGAAGCGGAACTGCC--C-TCC-CAGGAGCCTGACTCTCATTCTTTTAGAGCTGAGGTGGGGGCAGGCA-----CTGGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTTCTCCT s panTro4.chr19 59207318 285 + 63644993 CCCTGCTCTGCAGATGGATAAGCCCTCGG-----TGCTGGCAGGAC--AG--AGACACACAGAGAGAAATAGCCTCCCCTCCTTCCCACCCTGTGTGGACACTCGGAGGCTGGGTCCTTCTTCTCA---TGGTGTGTTGTC----ATCTGCAGCCACACAGGAAGCAGAACTACC--C-TCC-CAGGAGCCTGACTCTCATTCTTTTAGGGCTGAGGTTAGGGCAGGCA-----CCGGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTTCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030132 285 + 60714840 CCCTGCTCTGCGGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AG--AGACAGACAGAGAGAAATAGCCTCCCCTCCTTCCCACCCTGTATGGACACTCGGAGGCTGGGTCCTTCTTGTCA---TGGGGTGTGGTC----ATCTGCAGCCACACAGGAAGCGGAACTGCC--C-TCC-CAGGAGCCTGGCTCTCATTCTTTTAGGGCTGAGTTTGGGGCAGGCA-----CTGGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTGTGTCTGGTTTCTCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3755736 259 - 64156825 CCCTGCTCTGCGGATGGTTGAGCCCCCGG-----TGCTGGCAGGACAGAG--AGACACACAGG-----------------------------GTGTGGACACTCAGAGTCTGGGTC---ATTCTTCTCATGGAGTTTTGTC----ATCTGCAGACACACAGGAAGTGGAACTGCC--CTTCC-CAGGAGCCTGGCTCTCATTCCTTTAGAGCTGAGGTGGGGGCAGGCA-----CCAGACCCTCTGTAGACAGTTCAGACAGAAATGGGGTGTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTCGTCCT i rheMac3.chr19 I 27514 C 0 s macFas5.chr19 55179430 253 + 59248254 CCCTGCTCTGCGAATGGATGAGCCCTCAG-----TGCTGGCAGGAC--AG--AGACACACAGG-----------------------------GTGTGGCCACTCGGAGGCTGGGTC---GTTCTCC---TGGGGTGTTGTC----ATCTGCAGCCACACAGGAAGCAGAACTGAC--C-TCC-CAGGATCCTGACTCTCATTCCCTTAGGGCTGAGGTTGGGGCAGGCA-----CCGGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTTATCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252003 282 + 51301725 CCCTGCTGTGCGGATGGACGAGCCCTCGG-----TGCTGGcaggac--ag--agacacacagagagaaatagcctcccctccttccctcattGTGTGGACACTCGGAGGCTGGGTC---CCTCTCA---CGGGGTGTTGTC----ATCTGCAGCTACACAGGAAGCAGAACTGAC--C-TCC-CAGGATCCTGATTCTCATTCTTTTAGGGCTGAGGTTGGGGCAGGCA-----CCGGGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCGCAGCCACTGTCTGTCTGGTTTATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46969658 282 + 50890351 CCCTGCTCTGCGGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AG--AGACACACAGAGAGAAATAGCCTCCCCTCCTTCCCACCCTGTGCGGACACTCGGAGGCTGGGTC---CCTCTCA---CGGGGTGTTGTC----ATCTGCAGCCACACAGGAAGCAGAACTGAC--C-TCC-CAGGATCCTGACTCTCATTCTCTTAGGGCTGAGGTTTGGGCAGGCA-----CCGAGCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTTATCCT i chlSab2.chr6 C 0 I 10151 s calJac3.chr22 45545471 262 + 49145316 CCCTGCTCTGCGGATGGATGAGCCCTCGG-----TGCTGGCAGGAC--AG--AGAGACACAGG-----------------------------GTGTGGACACTTGGTGCCTTGGTTGTTCTTGTCA---TGGGGTTGTGTC----ATCTGCAGCCACACAGGAAGCAGAACTGCC--C-TCCACAGGAGCCTGGCTCTCATTCCTTTAGGTTTGAGGTAGGGGTGGGGGTGGGTCCAACCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGCTTTGTCCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3845042 251 + 145441459 TCCAACTGTGCTTGAGGGCAGAGCTACAGAGCCTTTCTGAAGGGAT--TG--TG---TACAGG-----------------------------GTGTGGC--TCTGGAGGCAGGGCA---GTCCCCA---TGACATG--GTCATATATCAGCAGCCCCACAGAAAGAGGAACTGCC--C-TCC-TCAGGACCATGCTCTGACTTCCTCAATGGTGTGACTAGGCCAGGCA-----GTCGACCCTCTGCCATTAGGTCTTACACAGATGGCGTTTCCTCAGCCCACCAG----TGTCTGCCTCACCTGTGCA i mm10.chr7 I 2 C 0 s canFam3.chr1 19706511 189 - 122678785 CCCAGCTCTAAAGATGGA-GGGACCTCGG-----TGCCTGCAGGAC--AGATAGACACACAGG-----------------------------GTGTGGCCACTCAGAGCCCAGTCC-TCACTGTCA---CGGGGTTATCAC----ATCATCAGCCCCACAGGAAGGGGAACAGCCAGT-CCC-CAGAGGCCTAGC----------------------------CTGGCT-----CTGGTGTCTTTGAGGCCACTACAG------------------TGGATCCCGAG----------------------- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102826239 102 - 106955855 I a score=57856.000000 s hg38.chr19_GL949753v2_alt 255789 27 + 796479 CGTCTCACCGAGAGCCGGGATGTAGCA s panTro4.chr19 59207603 27 + 63644993 CGTCTCACTGAGAGCTgggatgtagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030417 27 + 60714840 CGTCTCACTGAGAGCCAGGATGTAGCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3755995 27 - 64156825 CACTTCACGAAGGCCTGGGAGATAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55179683 27 + 59248254 CATCTCACTGAGAGCTGGGATGTAGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252285 27 + 51301725 CGTCTCACTGAGAGCCGGGATGTAGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980091 27 + 50890351 CGTCTCACTGAGAGCTGGGATGTAGCG i chlSab2.chr6 I 10151 C 0 s calJac3.chr22 45545733 27 + 49145316 CATCTCACTGAGAGCCGGGATATAGCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3845293 27 + 145441459 CATTACTGTCATGGCCATATTGTAGCA i mm10.chr7 C 0 T 58957 e canFam3.chr1 19706700 0 - 122678785 C e nomLeu3.chr10 102826239 102 - 106955855 I a score=522142.000000 s hg38.chr19_GL949753v2_alt 255816 232 + 796479 GCAAATAGAACTGGTG-CTTCTTGTGTCTGCCCTTCCTGATGAGGGT-AGCAGTGGCTTCCCCTTCCTTCTCACAGCTTCCCACATGGTCACCCTCCCTCCTTCAGCCCATCCATCAGCACAGCGTTGTGGGGTCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATGCTTCAGGGAAGACCCAGGTCCATGC--TGCAGGCAGACTCAGATCAGCAGAGACGCATCTCGCAT s panTro4.chr19 59207630 232 + 63644993 gcaaatagaactggtg-cttcctgcgtctgttcttccagatgagggt-agTGGAGGCTTCCCCTTCCTTCTCACAGCCTCCCACACGGTCACCCTCCCTCCTTCAGCCCGTCCATCAGCTCAGCGCTGTGGGGTCCTCACCATAGCAGTCGTCCCTCCAGCCCTGGAGATGCTTCAGGGAAGACCCAGGTCCATGC--TGCAGGCAGACTCAGATCAGCGGAGAAGCATCTCGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030444 232 + 60714840 GCAAATAGAACTGGTG-CTTTCTGCATCTGCCCTTCCAGATGAGGGT-AGTGGAGTCTTCCCCTTCCTTCTCACAGCCTCCCCCAAGGTCTCTCTCCCTCCTTCAGCCCATCCATCAGCTCAGCGTTGTGGGGCCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGACATGCTTCAGGGAAGACCCGGGTCCATGC--TGCAGGCAGACTCGGATCAGCAGAGAAGCATCTCGCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3756022 234 - 64156825 ACAAATAGAACTCGTGCCTTCCTGTATGTGCCCTTCCTGATCAGGGTGAGCCAAGGCTTTTCCTTCCTTCTCACAGCCTCCCACAAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCGGCACGGTGTTGTGGGGTCCTTACCATGGCAGTCATCTCTTCAGCCCTGGAGATGCTTCAGGGAAGACACGGGTCCATGC--TGCAGGCAGACTCAGATCAGCAGAGACGCACGTGACAC i rheMac3.chr19 C 0 T 27991 s macFas5.chr19 55179710 232 + 59248254 GCAAATAGAACTGGTG-CTTCCTGTGTCTGCCCTTCCAGATGAGGGT-AGCAGAGGCTTCCCCTTCCTTCTCACAGCTTCCCCCAAGGTCTCCCTCCCTCCTTCAGCTCGTCCATCAGCACAGCGTTATGTGGTCCTTACCATGGCAGTGGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGACACAGGTCCATGC--TACAGGCAGACTCAGACCAGCAGAGACGCACCTCACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252312 231 + 51301725 GCAAATAGAACTGGTG-CTTCCTGTGTCTGCCCTTCCAGATGAGGGT-AGCGGAggcttccccttccttctcacAGCTTCCCCCAaggtctccctccctccttccgcCCGTCCATCAGCTCAGCGTTGTGTGGTCCTTACCAT-GTAGTAGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGACACGGGTCCATGC--TGCAGGCAGACTCAGATCAGGAGAGACGCATCTGACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980118 231 + 50890351 GCAAATAGAACTGGTG-CTTCCTGTGTCTGCCCTTCCAGATGAGGGT-AGCAGAGGCTTCCCCTTCCTTCTCACAGCCTCCCCCAAGGTCTCCCTCCCTCCTTCAGCCCGTCCATCAGCTCAGCGTTGTGTGGTCCTTACCAT-GTAGTAGTCTCTCCAACCCTGGAGATGCTTCAGGAAAGACACAGGTCCATGC--TGCAGGCAGACTCAGACCAGCAGAGACGCATCTCGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545760 234 + 49145316 GCAAATAGAACTGGTGCCTTCCTGTATCTGCCCTTCCAGATGAGGGTAAGCTAAGGATTCCTGTTCCTTCTCACAGCCTCCCATGAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCACAGCAGTGTGGGGTTCTTACTTAGGCAGTTGTCTCTTCAGCCCTGGACATGCTTCAGGGAAGATGCAGGTCCATGC--TCCAGGCAGGCTCAGATCAGCAGAGACGCATCTCACAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706700 198 - 122678785 ---------------G-CTTCCTGAGATGTCCTGTCCTGGTGAGGAG-ATCAG-GGCATGTCCTTCCCTCCCAGAGCCTCCCCCATGGGGTCTCCTCCATTTTCAGCACATCCC--------------TGGGGTCCTCACCATGGACGGGGTC-CTGAGGCC---GAGGTGCTGCTGGG--GACATGGGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGACAGATGTGTGAC i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=137231.000000 s hg38.chr19_GL949753v2_alt 256048 57 + 796479 CTGGCTGTGCCGTCCAGGTTGAGCTGCGTGTGGCAGTGAGCACAGAGGAGAAATGCA s panTro4.chr19 59207862 57 + 63644993 CTGGCTGTGCCGTCCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGGAGAAATGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030676 57 + 60714840 CTGGCTGTGCCGTCCAGGCTGAGCTGTGTGTGGCAGTGAGCACAGAGGAGAAATGCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3728265 57 - 64156825 CTGACTGTACCATCCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGGGGAGAAATGCA i rheMac3.chr19 T 27991 I 27991 s macFas5.chr19 55179942 57 + 59248254 CTCGCTGTGCCATCCAGGCTGAGCTGCGTGTGGCAGTGAGGACAGAAGAGAAATGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252543 57 + 51301725 CTGACTGTGCCGTCCAGGCTGAGCTGTGTGTGGCAGTGAGGACAGAAGAGAAATGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980349 57 + 50890351 CTGGCTGTGACGTCCAGGCTGAGCTGCATGTGGCAGTGAGGACAGAAGAGAAATGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545994 57 + 49145316 CTGTCTGTGTAGTCCAGGCAGAGCTGTGTGTGGCCGTGGGCACAGAACAGAAATGCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19706898 56 - 122678785 ATCTCTGCGTAAGTCAGG-TGAGGTCACCGAGACAATGAGCCCTGAGGAGAAATACA i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=194369.000000 s hg38.chr19_GL949753v2_alt 256105 95 + 796479 GGGAAGTAGGGGAAGAAAAGTTGACTTCTTTCTTGACACTGGATTGTGGGTTTTCTTTCAACCAAATAGT-CCCC-TCTTAACTTCC----CCTTTTTAAA s panTro4.chr19 59207919 95 + 63644993 GGGAAATAGGGGAAGAAAAGTTGACTTCTTTCTTGACACTGGATTGTGGGTTTTCTTTCAACCAAATAGT-CCCC-TCTCAACTTCC----CCTTTTTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030733 95 + 60714840 GGGAAATAGGGGAAGAGAAGTAGACTTCTTTCTTGACACTGGATTGTGGGTTTTCTTTCAACCAAATAGT-CCCC-TCTCAACTTCC----CCTTTTTAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3756313 95 - 64156825 GGGAAATAGGGGAAGAAAAGTTGACTTCTCTCTTGGCATGGGATTGTGGGTTTTTTT-CAACCAAATAGTCTCCT-TCTCAACTTCT----CCTTTTTAAA i rheMac3.chr19 I 27991 I 243 s macFas5.chr19 55179999 90 + 59248254 GGGAAATAGGGGAAGAAAAGTTGACTTCTTTCTTGGCACTGGACTGTGGGTTTTCTT-----TCAATAGT-TCCC-TCTCAACGTCT----CCtttttttt i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47252600 90 + 51301725 GGGAAATAGGGGAAGAAAAGTTGACTTCTTTCTTGGCACTGGATTGTGGGTTTTCTT-----TCAATAGT-TCCC-TCTCAACttcc----cctttttaat i papAnu2.chr19 C 0 I 15 s chlSab2.chr6 46980406 90 + 50890351 GGAAAATAGGGGAAGAAAAGTTGACTTCTTTCTTGGCACTGAACTGTGGGTTGTCTT-----TCAATAGT-TCCC-TCTCAACTTCC----CCTttataat i chlSab2.chr6 C 0 I 12 s calJac3.chr22 45546051 96 + 49145316 GGGAAACAGGGGAAGGAAAGTTGACTTCTTTCTTGGCACTGGATTTTGGGTTTTCTTTCAACCAAATAGT-TCCCATCTCAATTTCC----CCTTTTTAAA i calJac3.chr22 C 0 T 17017 s canFam3.chr1 19706954 84 - 122678785 GGCAAATA-AGGAAGGAAATACAACACCTCTCCTGTCCTCCGAGCATGGTATTTCTT--------------TCTC-TCACAGCTTCCATGGACTTCTCAA- i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=3300.000000 s hg38.chr19_GL949753v2_alt 256200 3 + 796479 TGT s panTro4.chr19 59208014 3 + 63644993 TGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030828 3 + 60714840 TGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55180099 3 + 59248254 ttt i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47252705 3 + 51301725 ttt i papAnu2.chr19 I 15 C 0 s chlSab2.chr6 46980508 3 + 50890351 ttt i chlSab2.chr6 I 12 C 0 s canFam3.chr1 19707038 3 - 122678785 TTT i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e calJac3.chr22 45546147 17017 + 49145316 T e nomLeu3.chr10 102826239 102 - 106955855 I e rheMac3.chr19 3756408 243 - 64156825 I a score=140816.000000 s hg38.chr19_GL949753v2_alt 256203 77 + 796479 TTTTGCTCCAGCGTCCACTCCCTCC-CCCCCGGGAAGAAACCTCTGAGTCTTTCCTGCCTCCTCGGTGCCCATTGCGT s panTro4.chr19 59208017 76 + 63644993 TTTTGCTACAGCGTCCACTCGCT-C-CCCCCGGGAACAAACCTCTGAGTCTTTCCTGCCTCCTCGGTGCCCCTTGCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030831 76 + 60714840 TTTTGCTACAGCGTCCACTCCCT-C-CCCCCGGGAACAAACCTCTGAGTCTTTTCTGCCTCCCAGGTGCCCCTTGCAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3756651 77 - 64156825 TTTTGCTGCAGTGTCCACCCCCA-CACCTCTGGGAAAAAACCTTTGAGTCTTTCCTGCCTCCTCGGTGCCCCTTGCGT i rheMac3.chr19 I 243 T 28235 s macFas5.chr19 55180102 76 + 59248254 ttttGCTAGAGCGTCCACCCCCT-C-CCCCCAGGCACAAACCTCTGAGTCTTTCCTGCCTCCTCCGTGCCCCTTGCGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252708 76 + 51301725 ttttgctacagcgtccaccccct-c-cccccaggAACAAACCTCTGAGTCTTTCCTGCCTCCTCGGTACCCCTTGCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980511 76 + 50890351 ttttGCTACAGCGTCCACCCCCT-C-CCCCCAGGAACAAACCTCTGAGTCTTTCCTGCCTCCTCGGTGCCCCTTGCGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19707041 75 - 122678785 TCCTGTGACATCCTCCACATCCC-C-TTCCTCGGAACACACCTCCAAGTCTATCCAG-CTCATTAATACCCCTTGTTC i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e calJac3.chr22 45546147 17017 + 49145316 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=1083895.000000 s hg38.chr19_GL949753v2_alt 256280 645 + 796479 ------CCTTAGCCGTCCCTCTGCACCTCAATTCCTG--GTCAACATTTTGGGAACAATGACTTATGTTTGAGCTTTGATTTGGGGAGTGGGGGAGGGAGTTGATATTTATTTG--ATGACTGGTtatcatccgctgcctacgtgaccttggtttgtaatgtcccatcactgagcctcagtttcttcctttgcagattgttgtcatgaatcccactcgtcacagtggttgtggggTCAG--TGGTGCCTGGGACATTGGGAGGGGCTCATTTGTGCTTGATTTCCAGACCAGGGTAAGACCTGA-------GGC-TTTGGGACG-TGAGAGGATCTTGCTGTTGGACTCCACATTCT--GTAGGTGATTGATGAGTCCACTCAAGATGTCACATCTGACCGTAAT-GGAGAAACG-TATGTGTAGCATTTCTGAAATACCCAGAGTATCAAGGTCATGAGCAGAAAAAGACATGTGGAAA-CCCCAAGTGTAGACGGACTCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCCGGGACCATCAAGGGCTCATTAGGGTGGAGGTTTCCAC-CACTGAGTGGAGCCGGGAGAGGAACCCCGGGATCTGCAATGACAGTGAGGGGCTCAGGGCTCCAGACCAAGGTGGGAGGCTGCGtcctct s panTro4.chr19 59208093 647 + 63644993 ------CCTTAGCCGTCCCTCTGCACCTCAATTCCTG--GTCAACATTTTGGGAACAATGACTTATGTTTGAGCTTTGATTTGAGGAGTTAGGGAGGGAGTTGATATTTATTTG--ATGACTGGTtatcatccactgcctacgtgaccttggtttgtaatgtcccatctctgagcctcagtttcttcctttgcagattgatgtcacaaatcccactggtcacagtggttgtggggTCAG--TGGTGCCTGGGACATTGGGAGGGGCTCATCTGTGCTTGATTTCCAGACCAGGGTAAGACCTGA-------GGC-TTTGGGACG-TGAGAGGATCTTGGTGTTGGACTCCACATTCT--GTAGGTGATTGATGAGTCCACTCAAGATGTCACATCTGACCGTGTT-GGAGAAATG-TATGTGTAGCATTTCTGAAATACCCAGAGCATCAAGGTCATGAGCAGTAAAAGGGGTGTGGAAGTTCCCAAGTGTAGATGGATCCACAGGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCCGGGACCATCAAGGGCTCATTAGGGTGGAGGTTTCCGCAAACTGAGTGGAGCCGGGAGAGGAACCCCGGGATCTGCAATGACAGTGAGGGGCTCAGGGCTCCAGACCAAGGTGGGAGGCTGCGtcctcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56030907 646 + 60714840 ------CCTTGGCCATCCCTCTGCACCTGAATTTCTG--GTCAACATTTTGGGAACAATTACTTATGTTTGAGGTTTGATTTGAGGAGTTAGGGAGGAAGTTTATATTTgtttg--atgactggttatcatccactgcctatgtgaccttggtttgtagtgtcccatctctgagcctcagtttcttcctttgcagattattgtcacaaatcccactcgtcacagtggttgtggggTCAG--TAGTGCCTGGGACATTGGGAGGGGCTCATTTGTGCTTGATTTCCAGAGCAGGGTAAGACCTGA-------GGC-TTTGGGATG-TGAGAGGATCTTGGTGTTGGACTCCACATTCT--GTAGGTGATTGATGTGTCCACTCAAGATGTCACATCTGACCCTAAT-GGAGAAATG-TATGTGAGGCATTTCTGAAATACCCAGAGCATCAAGGTCATGAGCAGAAAAAGACATGTGGAAGTTCCCAAGTGTAGGTGGATCCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGTGTCCCGGGACCATCAAGGGGTCATTAGGGTGGAGGTTTCCAC-CACTGAGTGGAGCTGGGAGAGGAACCTCGGGATCTGCAATAACAGTGAGGGGCTCAAGGCTCCAGACCAAGGTGGGAGGCTGCAtcctcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3728493 631 - 64156825 ------CCTTGGCCGTCCCTCTGCACCTCAATTCCTG--CTCAGCATTTCTGGAACAATGACTTATGTTTGAGCTTTGATTTGGGGAGTGGAGGAGGGAGCTGATATTTATTCA--ATGACCGGTtatcatccactgcctgtgtgaccttgggcggtagtgaaccatctctgagcctcagtcttttcctttgtagactgTTTTCACAAATCCCGCTCGCCACCGTGGTCGTGGGGTCAG--TGGTGCCTGGGACATTGGGAGGGGCTCATTTGTGCTTCATTTCCAGACCAAGGTAAGATCTGA-------GGTGTCTGGGACA-TGAGAGGATCTTGGTGTTGGA------------------TGGTTGATGCGTCCACTCATGATGTCGCCCCTGACCCTAAT-GGAGAAGTG-TACATCAGGCATTTCTGAAATACCCAGAGAATCAAGGTCATGAGCAGAAAAAGAGGTGTGGAAGTTCCCAAGGGTAGACAGATCCACAAGAAAGAACATAGGCCAGAGATGAGATGCCACAGGGTGGCAGGACCATCGAGGGGTCATTGGAGTGGAGGTTTCCAT-CACTGAGTGGAGCCGGGAGAGGAACCTCACGATCTGCAATGACAGAGCGGGGCTCAGGGCTCCAGATGAAGGTGGGAGGCTGCGtcctcc i rheMac3.chr19 T 28235 C 0 s macFas5.chr19 55180178 646 + 59248254 ------CCTTGGCCGTCCCTCTGCACCTCAATTCCTG--GTCAACATTTTGGGAACAATGACTTATGTTTGCGCTTTGATTTGAGGAGTTGAGGAGGGAGTTGATACTTATTTG--ATGACTGGTTGTCATCCGCTGCCTATGTGACCTTGGTTTGTAGTGTCCCATCTCTGAGCCTCAGCTTCTTCCTTTGCAGGCTATTGTCATGAATCCCACTCGTCACCGTGGTTGTGGGGTCAG--TGGTGCCTGCTACATTGGGAGGGGCTCATTTGTGCTTGATTTCCAGACCAGGGTAAGACCTGA-------AGTGTTTGGGACA-TGAGAGGGTCTTGGTGTTGGACTCCACAGTCTACGTAGGTGATTGATGTCGCCACGTAAGACGTCACATCTGACCGTAAT-GGAGAAATG-TACATCAGGCATTTCTGAAATACCCAGAGCATCAAGGTCATGAGCAGAAAAAGATGTGTGGAAG-CCCGGAGTGTAGAAGGATCCACAAGAAAGAACAGAGG-CAGAGGTGTGATGCCACAGGATCCCGGAACCATCAAGGGCTCATTAGGGTGGAGGTTTCC-C-CACAGAGTGGAGCCGGGAGAGGAACCTCAGGATCTGCAATGACAGAGAGGGCCTCAGGGCTCCAGATCAAGGTGGGAGGCTGCGtcttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47252784 647 + 51301725 ------CCTTGGCCGTCCCTCTGCACCTCGATTCCTG--GTCAACATTTTGGGAACAATGACTTATGTCTGCGCTTTGATTTGAGGAGTTGAGGAGGGAGTTGATACTTATTTG--ATGTCTGGTTGTCATCCACTGCCTATGTGACCTTGGTTTGTAGTGTCccgtctctgagcctcagcttcttcctttgcAGACTGTTGTCATGAATCCCACTCGTCATGGTGGttgtggggtcag--tggtgccTGGGACATTGGGAGGGGCTCATTTGTGCCTGATTTCCAGACCAGGGTAAGACCTGA-------GGTGTTTGGGACA-TGAGAGGATCTTGGTGTTGGACTCCACAGTCTGTGAAGGTGATTGATGTCTCCACTTAAGATGTCACATCTGACCCTAAT-GGAGAAATG-TACATCAGGCATTTCTGAAATACCCAGAGCATCAAGGTCATGAGCAGAAAATGACATGTGGAAG-CCCCGAGTGTGGAAGGATCCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCCGGGACCATCAAGGGCTCATTAGGGTGTAGCTTTCCGC-CACTGAGTGCAGCCCGGAGAGGAGCCTCGGGATCTGTAAC-ACAGTGAGGAGCTCAGGGCTCcagaccaaggtgggaggctgCGTCTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980587 647 + 50890351 ------CCTTGGCTGTCCCTCTGCACCTCGATTCCTG--GTCAACATTTTGGGAACAATGACTTATGTTTGCGCTTTGATTTGAGGAGTTGAGGAGGGAGTTGATACTTATTTG--ATGACTGGTTGTCATCCGCTCCGtatgtgaccttggtctgcagtgtcccatctctgagcctcagcttcttcctttgcagactgTTGTCATGAATCCCACTCGTCTTCGTTGTCGTGGGGTCAG--TGGTGCCTGGGACATTGGGAGGGGCTCATTTGTGCCTGATTTCCAGAGCAGGGTAAGACCTGA-------GGTGCTTGGGACA-TGAGAGGATCTTAGTGTTGGACTCCACAGTCTACGTAGATGATTGATGTTTCCACTTAAGATGTCACATCTGACCCTAAT-GGAGAAATG-TGCATCAGGTGTTTCTGAAATACCCAGAGCATCAAGGTCATGAGCACAAAAAGACATGTGGAAG-CCCTGAGTGTAGAAGGAGCCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCTGGCACCATCAAGGGCTCATTAGGGTGGAGGTTTCCGC-CACTGAGTGGAGCCAGGAGAGGAGCCTTGGGATCTGTAAT-ACAGTGAGGGACTCAGGGCTCCAGACCAAGGTGGGAGGCTGCGtcttcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19707116 627 - 122678785 CTGGGGACAGAGCCATCC--TTGCATAGGGGGTCCTGTATGTAGGAGTTAGGGGACATTTATTTGggttatggctctgatt---------atgaaggaagatggaccttctttgaaacaattctgcatcatccactgcctgcatgactttgggcagtaatatccttgctctgagcctcag-ttccccatctgtgggatgTTGTCCTGAACTGCA-GCTCCAGTGTGGTTGTGG---CAATTTGGTGTCAGGTCCC---AGAAGGGATGGGTTGCAGTGAGTTTCCAGATCA-GGTAAGAACAGCATGGGCTGGTTCCTGATATGCTGATGGGATCCCA-TGGCAGACTCTGCAGTCCG-GTGGCTGTTTCGTGTGCCCACTGGAGACCTTG--TCTGCTTAGAATCCCAGGACTGCCACTTACAGTATGTGTGGAGTATGCAG----TCACAGACACATGCAGAGAAGCAGGAAATGAAATTTGCAGATAGAGGTGGAACC-CAGCAGGAAATAGGGAACTCAGCTGAGTCCTCATTGGTTTCTGGGACCTTGGAGGAGTTG-AAGGGAGGGTGTTTCTAC--ACTTATGGATGC--AAAGGGGGATCCCAGGGTCTTT----TCAGTGGGG-----AGGGCTCCAGGAGAAGAT--TAGGCTGCATCCTCT i canFam3.chr1 C 0 I 10192 e mm10.chr7 3845320 58957 + 145441459 T e calJac3.chr22 45546147 17017 + 49145316 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=125321.000000 s hg38.chr19_GL949753v2_alt 256925 73 + 796479 agctacacctgaggctggagtggaccccaagcagcccaggggaattccctcaagggagtgcaccaaactgtcc s panTro4.chr19 59208740 73 + 63644993 agctacacctgaggctggagtggaccccaagcagcccaggggaattccctcaagggagtgcaccaaaccgtcc i panTro4.chr19 C 0 I 6 s ponAbe2.chr19 56031553 73 + 60714840 ggctacacctgaggctggagtggaaccccagcagcccagaggaattctatcaaaggagtacaccaaaccgtcc i ponAbe2.chr19 C 0 I 6 s rheMac3.chr19 3729124 73 - 64156825 agccacacctgaggctggagtggaccccaagcaacccaggggagtcacctcaagggagtgcacccaaccgtcc i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55180824 73 + 59248254 agccacacctgaggctcgagtggaccccaagcagcccaaaggagttccctcaaaggagtgcacccaaccgtcc i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47253431 73 + 51301725 AGCCACACCTGAGGCTCGAGTGGACCCCAAGCAGCCCAGAGGAGTTCCCTCAAAGGAGTGCACCAAACCGTCC i papAnu2.chr19 C 0 I 34665 s chlSab2.chr6 46981234 73 + 50890351 agccacacctgaggctcgagtggaccccaagcagcccagaggagttccatcaaaggagtgcaccaaactgtcc i chlSab2.chr6 C 0 I 6 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=2175640.000000 s hg38.chr19_GL949753v2_alt 256998 1318 + 796479 agacctgctggaattccaaggaaagaagcactaaacaccagggtgttcatagagcatttattagggggacctctgcacagtgggGCATCCTTGTCTTCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGCACAAGGAGACACTGGGTATTCTATCCAAAGCTTTAACCTAAAATAAAAACAA--AACCAAAAATAAACCCCTAGAAAATATGATCTCTCAGTAcagttgtttcttgggatacacaggcaattcgtttcagtaccccctacatgtaccaacacttgctcgtactccagccctgacgttgtctctgctgggtctgcatataggaaaagtctgccgttcatatacgcaagtcttgtttctcacaaatgctatagttttgatccccgtttgtttggaaaaagtgtgcatataagagacccctggaattcaaggctgcattgctccagggttgcctgGATTTtgagtttatttgggagtgagaagcaaggattacaatatggagtgcatggcatggcaagccacagtgtgtccagagagggaagtgtgatgttgtgatatatgctggttttcacccgcagttcctggcttgtaactcccatagcccttgttatagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttccttcacctaacccaaagtaagactcgaatgttccctgcctttctgatagtggatcttaagaccctcccagaagacagtctcaccctgttccttgtgggaggaaatgctgATGTCatgaagctttcataaaagccccagaggactgggtttcatgagtttctgggtggctgagcatgctaaggctcctggagggcgacgcccagggagggtatggaagccccgggcctcttcccccatgcctcctcctatgagtttcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgttt-cctgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccagtcagtcagaagttctggaggtctggacttgggaatggtgttgggggcagttttggggaatgggccttcaatctgtgggatccgggactgtctctgggtagacagcaccagagctgacttagaggaca-cccagctgctgttc--gctactgcgtct-ggggaaaaaaac--cccatacatctggtcctagaagtctttttctgtgttgatgattcctg-----tgac s panTro4.chr19 59208819 1314 + 63644993 agagctgctgggattccaaagaaagaagcactaaacaccagggtgttcatagagcatttattagggggacctctgcacagtgggGCGTCCTTGTCTTCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTTTTCAGATGGACAAGGAGACACTGGGTATTCTATCCAAAGCTTTAACCTAAAATAAAAACAA--AACCAAAAATAAACCCCTAGAGAATATGATCTCTCAGTAcagttgtttcttgggatacacaggcaattcatttcagtaccccctacatgtaccaacacttgcttgtactccagccctgacattgtctctgctgggcctgcatataggaaaagtctgccgttcatattcacaagtcttgcttctcacaaatgcaatagttttgatccccgtttgtttggaaaaagtgtgcatataagagacccctggaattcaaggctgcattgctccagggttgcctgGATTTtgagtttatttgggagtgagaagcaaggattacaatatggagt-----gcatggcaagccacagtgtgtccagagagggaagtgtgatgttgtgatatatgctggttttcacctgcggttcctggctcgtaactcccatagcccttgttacagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttacttcacctgacccaaagtaagactcgaatgttccctgcctttctgatagtggatcttaagaccctcccagaagacagtctcaccctgttccttgtgggaggaaatgctgATGTCatgaagctttcataaaagccccagaggactgggtttcatgagtttctggatggctgagcatgcgaaggctcctggagggcgatgcccagggagggtgtggaagccccgtgcctcttcccccatgcctcctcctatgagtttcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgtttccctgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccagtcagtcagaagttctggaggtctggacttgggaatggtgtggggggcagtcttggggaatgggcctttaatatgtgggatccgggactgtctctgggtagacagtgccagagctgacttagaggaca-cccagctgctgttc--gctactgcgtct-ggggaaaaaaac--cccatacatctggtcctagaagtctttttctgtgttgatgattcctg-----tgat i panTro4.chr19 I 6 C 0 s ponAbe2.chr19 56031632 1313 + 60714840 agagctgctgggattccaaagaaagaagcactaaacaccagggtgtgcatagagcatttattagggggacttccacagagtgggGCGCCCTCGTCTCCTTGCCGAGTGTCTGTTTGTGGATCTCAAGGATGTGCTTCCTCATAGCAGCATGTTTTTCAGATGGACAAGGAGACACTTGGTGTTCTACCCAAAGCTTTAACCTAAAATAAAAACAA--aaacaaaaataaacccctagagaatatgatctctcagtacagttgtttcttgggatacacaggcaattcgtttcagtaccccctacatgtaccaacacctgctcgtcctccagccctgacattgtctctgctgggcctgcatataggaaaagtctgccgttcatatacgcaaatcttgcatcccacaaatgcaatagttttgatccccgtttggttgaaaaaagtgtgcacataagagaccccaggaattcaaggctgcgttgctccaaggttgcctggatttcgagtgtatttgggagtgagaagcaaggattacaatctggagtgcatggcatggcaagccacagtgtgtccgaagagggaagtgtga---tgtgatacacactggttttcacccttggttcctggctcacaact-ccatagcccttgttatagtcttttgttataacattggctgtgctgggcctcaggggaggcctctgacctcctcctgcccttccttcacctg-cccaaggcaagactcgaatg-tccctgcctttctgatggtggctcttaagaccctcccagaacacggtctcagcctgttccttgtgggaggaaatgctgacatcatgaagc-ttcataaaaacccaagaggactgggtttcatgggtttctggatggctgagcatgcggaggctcctggagggcgacgcccagggaaggtatggaagccccgcgccccttcccccatgcctccttctatgagtctcttcttctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtgtttccctgagttctgtgagctgctacagcaaattaatcaaacccaaagagtggggcatgggatccccaacttgaagccggtcagtcagaagttctggaggtctggacttgggaatggtgtggggggcaatcttagggaatgaaccttcaatctatgggatccgggactgtgtctgggtagacagcgtcagagctgacttagaggaca-cccagctgctgttc--gctactgggtctgggggaaaaaaac--cccacatatctggtcctagaagtattcttctgtgttgatgattcctg-----tgat i ponAbe2.chr19 I 6 C 0 s rheMac3.chr19 3729203 1299 - 64156825 agagctgctgggattccaaagaaagaagcactgaacaccagggtgtccatagagcatttattagggggacttccatagagtgggGCATCCTTGTCTCCTTGCCCAATGTCTGCTTGTGCATCTCAAGGATGTGCTTCCACATAGAAGCATGTTCCTGAGATGGACAAGGAGGCACTGGGTGTTCTACACAAAGCTTTaacc--------aaccaaccaaccaaccaaaaaaccctagagaatatgatctctcagtacagttgttttttgggatacacaggcaattcgtttcagtgccctctacatgtacccaaatctgcccgtactccagcctcgatgttgtctctgcttgacctgcatataggaaaagtttgctgttcatacacgcaggtcttgcttctcacaaatgccatagtt-tgatccctgtttggttgaaaa-agtgtgtatataagagatcccaggaattcaaggttgccttgctccagggtcgcctggattttgagtgtatttgggaatgagaagcaaggattacaatctggagtgcatggcatggcaagacacagtgcgtccagagagggaagtgtgatattgggatatataccggttttcacccgcggttccttgcttgtaactcccatagcccttgttacagtcttttgttataacattggctgtgttgggcctcaggggaggcctctgacctcctcctgcccttcctttacctg-ctcaaggcaagaatctaatgttccctgcctttctaatggtggctcataagaccctcccagaagacagtctcaccctgtttcttgtgggaggaaatgctgACATCatgaagcttccataaaagcccaagaggactgggtttcatgagtttctggatggctgagcatgcagtggttcctggagggtggcacccagggagggcatggaagtctcgtgccccttcccccatgcctcctcctatgtgtctctttatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtccatgtctccctgagttctgtgagctgctacagcaaattattcaagcccaaagagggggtcatgggatccccaacttgaagttg-------------tttggaggtctggacttggcagtggtgtggagggcagtcttggggactgagccttcaatctgtgggatctcggactgtctctgggtagacagcgtcagaactgactta---gacatcccagctgatgtctaagctactgggttt-ggggaaaaaaaa--cccacacatctgatcctacaag---tcttctgtgttgatgatcgttgatgattggt i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55180903 1314 + 59248254 agagctgctgggattccatagaaagaagcactaaacaccagggtgttcatagagcatttattagggggacttccatagagtgggGCGTCCTTGTCTCCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGATGTTCTATCCAAAGCTTTAACCTAAAATAAAAATAA--AAACAAAAATAAACCCCTAGAGAATATGATCTCTCAGTACAGTTGTTTCTTGGGATACACAGGCAATTCATTTCAGTACCCGCTACGTGTAACAAAACTCACTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCCGCTGTTCATATACGCAAGTCTTGCTTCTCACAAATGCAATAGTTCTGATCCCCATTTGTTTGAAAACAGTGTGCACATAAGAGACCCCAGGAATTCAAGGTTGCCTTGCTCCAAGGTTGCCTGGAGTTtgagtgtatttgggagtgagaagtaaggattacaatctggagtgcatggcatggcaagccacagtgcatccggggaggaaagtgtgatgttggcatatatgctggttttcacccgcggttcctggttcataactcccatagcgcttgttacagtctttcgttagaatgttggctgttttgggcct--aggggggcctctga---cctcctgcccttccttcacctg-cccaaggcaagacttgaatgttccctgcctttctgatggtagctcttgagacccctctagaagatggtctcaccctgttccttgtgggaggaaatgctgACATCatgaagcttccataaaagcccaagaggactgggtttcatgagtttctggatggctgagc-tgtggaagctcctggagggtggcgtccagggagggcatggaagccccgcgccccttcccccgtgcctcctgctatgtgtctcttcatctgtgtcctctgcagtgtgctttgtattcaaccaggaaatgtcagtctttccctgagttctgtgagctgctacagcaaattattcaagcccaaagagggggtcatgggatccccaacttgaagccagtcgatcagaagttctggaggtctgcacttgggaatggtgtgggggacagtcttggggacttagcctttaatctgtgagatgtgggactgtctctgggtagacagcgtcagagttgacttagaggaca-cccagctacagttc--gctactgggtct-gggggaaaaaaaatcccacacatctggtcctagacgtcttcttctgtgttgatgattcctg-----tgat i macFas5.chr19 I 6 C 0 s papAnu2.chr19 47288169 1317 + 51301725 AGAGCTGCTGGGATTCCAtagaaagaagcactaaacaccAGGGTGTTCACAGAGCATTTATTAGGGGGACTTCCATAGAGTGGGGCATCCTTGTCTCCTTGCCCAGTGTCTCCTTGAGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGCTGTTCTATCCAAAGctttaacctaaaataaaaataa--acacaaaaataaacccCTAGAGAATATGATCTCTCAGTACAGTTGTTTCTTGGGATACACAGGCAACTCATTTCAGTACCCCCTACACTTAACAAAACTCGCTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCTGCTGTTCATATACACAAGTTTTGCTTCTCACAAATGCTATAGTTTTGATCCCCGTTGGTTTGAAAAAAGTGTGCACATAAGAGACCCCATGAATTCAAGGTTGCATTGCTCCAGGGGTGCCTGGATTTTAAGTGTATTTGAGAATGAGAAGCAGGGATTATAATCTGGAGTGCATGGCATGGCAAGCCACAGTGCATCCAGGGAGGGAAGTGTGATGTTGGGATATATGCTGGTTTTCACCCGCAGTTCCTGGTTCATAACTCCCACAGTGcttgttacagtcttttgttaGAATGTTCACTGTGTTGGGCCT-AgggggggCCTCTGAcctcctcctgcccttccttCACCTG-CTCAAGGCAAGACTGGAATGTTCCCTGCCTTTCTGATGGTGGCTCTTAAGACCCATCTAGAAGATGGTCTCACCCTGTTCCTTGTGGGAGGAAATGCTGAcatcatgaagcttccataaaagcCCAAGAGGATTGGGTTTCATGAGTTTCTGGATGGCTGAGCATGTGGAAGCTCCTGGAGGGTGGCgtccagggagggcatggaagcccCGTGCCCCTTCCCCCATGCCTCCTGCTATGTGTCTCTTCATCTGTGTCCTCTGCAGTGTGCTTTGTATTCAACCAGGAAATGTCAGtgttt--ctgagttctgtgagctgctacAGCAAATTTatcaaacccaaagagggggtcatgggatccccaacttgaagccagtcGATCAGAAGTTCTGGAGGTCTGCACTTGGGAATGGTGTGGGGGACAGTCTTGGGGACTTAGCCTTTAATCTGTGGGATGTGGGACTGTCTCTGGGTAGACAGCGTCAGAGCTGActtagaggaca-cccagctgcTGTTC--GCTACTgggtct-ggggaaaaaaaaatcccacacatCTGGTCCTAGAAGTCttcttctgtgttgatgattCCTG-----TGAT i papAnu2.chr19 I 34665 C 0 s chlSab2.chr6 46981313 1317 + 50890351 agaaccgctgggattccatagaaagaagcactaaacaccagggtgtccatagagaatttattaggggaacttccatagagtgggGCATCCTTGTCTCCTTGCCCAGTGTCTCCTTGTGGATCTCAAGGATGTGCTTCCACATAGCAGCATGTTCTTCAGATGGACAAGGAGACACTGGGTGTTCTATCCAAAGCTTTAACCTAAAATAAAAATAA--ACACAATAATAAACCCCTAGAGAATATGATCTCTCAGTCCAGTTGTTTCTTGGGATACACAGGCAACTCATTTCAGTACCCCCTACACATAACAAAACTTGCTGGTACTCCAGCCCTGACATTGTCTCTGCTGGACCTGCATATAGGAAAAGCCCGCTGTTCATATACGCAAGTCTTACTTCTCACAAATGCAATAGTTCTGATCCCCATTTGTTTGAAAACAGTGTGCACATAAGAGACCCCAAGAATTCAAGGTTGCATTGCTCCAGGGCTGCCTGGATTTtgagtgtatttgggagtgagaagcaaggattacaatctggagtgcatggcatggcaagccacagtgcatgcggggagggaagtgtgatgttgggatatatgctggttttcacccgcggttcctggttcataactcccatagcgcttgttacagtatttcgttagaatgttggctgtgttgggcct-aggggaggcctctgacctcctcctgcccatccttcacctg-cccaaggcaagacttgaatgttccctgcctttctgatggtggctcttgagacccatctagaagatggtctcaccctgttccttgtgggaggaaatgctgACATCatgaaacttccataaaagcgcaagaggactgggtttcatgagtttctggatggctgagcatgtggaagcgcctggagggtggcgcccagggagggcatggaagccccgcgccccttcccccatgcctcctcctctgtgtctctttatctgtgtcctctgcagtgtgctttgtattcaaccgggaaatgtccatgttt--ctgagttctgtgagctgctacaggaaattaatcaaacccaaagagggggtcatgggatccccaacttgaagccagtcgatcagaagttctggaggtctgcacgtgggaaagatgtgggggacagtcttggggacttaacctttaatctgtgggatgtgggactgtgtctgggtagacagcgtcagagttgacttagaggaca-cccagctgctgttc--gctactgggtct-ggggaaaaaaaaatcccacacatctggtcctagaagtcttcttctgtgttgatgattcctg-----tgat i chlSab2.chr6 I 6 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e nomLeu3.chr10 102826239 102 - 106955855 I a score=34944.000000 s hg38.chr19_GL949753v2_alt 258316 14 + 796479 gtgagagtagagga s panTro4.chr19 59210133 14 + 63644993 gtgagagtagagga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56032945 14 + 60714840 gtgagagtagagga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826341 14 - 106955855 GTGAGAGTAGAGGA i nomLeu3.chr10 I 102 C 0 s rheMac3.chr19 3730502 14 - 64156825 gtaagagtagagga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55182217 14 + 59248254 gtgagagtagagga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47289486 14 + 51301725 GTGACAGTAGAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46982630 14 + 50890351 gtgagagtagagga i chlSab2.chr6 C 0 I 33 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T a score=456898.000000 s hg38.chr19_GL949753v2_alt 258330 275 + 796479 aaagcaccgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagagcctgacagagctgcctggaaacagagttccctggttccacaggttcaaagccagagttgctgtcagtccattggaggagatgctgttgctggtcaatggttctcttgagagcatcttatctgaattcctgacgtcctaaagaaCATCTAGTGATAAACTTTGTCAAAGCAGAA-GGGGCTGAAGGACATGGAAGAGtttcttatggg s panTro4.chr19 59210147 275 + 63644993 aaagcaccgtagagagCGCTCtctgtacatagagaggtaaaggaagttcttatcagcaacaagggagagcctgacagagctgcctggaaacagagttccctggttccacaggttcaaagtgagagttgctgtcagtccattgaaggagatgctgttgctggtcaatggttctcttgagagcatcttatctgaattcctgacgtcctaaagaatatctagtgataaaccttgtcaaagcagga-ggggctgaaggacatggaagagtttcttatggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56032959 275 + 60714840 aaagcaccgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagaggctgacaaacctgcttagaaacagagttccctggttccacaggttcaaagccagaggtgctgtcagtccattggaggagatgccattgctgggcaagtgttctctcgagagcatcttattggaattcctgacatcctaaagaatatctagtgataaaccttgtcaaagcagaa-gggggtgaaggacatggaagagtttcttgtagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826355 271 - 106955855 AAAGCACCATAGAGAGAGCTCTCTGTACATAGAGAggtaaaggaagt-----tcagcaacaagggagaagctgacagagctgcccggaaacagagttccctggttccagaggttcaaagtcagagttgctgtcagtccattggaggagaagccgttgctgggcaagtgttctctcaagagtgtcttatctgaattcctgacgtcctaaagaaTATCTAGTGATAAACCTTGTCAAAACAGGAGGGGGGTGAAGGACATGGGAGAGtttcttatggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3730516 276 - 64156825 aaaacaccttagagagagctctcAGTACATAGAGAggtaaaggaggttcttataggcaacaaaggagaggctgacagagctgcttagaaacagagttctctggttccacaggttcagagccagagctgctgtcggtccactgcaggagatgttgttgctgggaaaatgttctctcgagagcatcttacctgaattcctgacatcctaaagaaTAGCTAGTGATAAACCTTGTCAATGCAGGAGATGGGTGAAGGACATGAAAGAGtttcttgtggg i rheMac3.chr19 C 0 I 486 s macFas5.chr19 55182231 274 + 59248254 aaagcactgtagagagagctctctgtacatagagaggtaaaggaagttcttatcagcaacaagggagaggctgac--agctgcctagaaacagagttctctggttccagaggttcaaagccagagttgctgtcagtccattggaggagatgccattgctgggcaagtgttctctcgagagcatcttacctgaattcctgacatcctaaagaaTAGCTAGTGATAAACCTTGTCAAAGCAGGAGAGGGGTGAAGGACATGGAAGTGTTTCTTGTGGG i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47289500 274 + 51301725 AAAGCACTGTAGAGAGAGCTCTCTGTACGTAGAGAGGTAAAGGAAGTTCTTATCAGCAACAAGGGAGAGGGTGAC--AGCTGCCTAGAAACAGAGTTCCCTGGTTCCAGGGGTTCAAAGCCAGAGTTGCTGTCAGTCCATTGGAGGAGATGCTATTGCTGGGCAAGTGTTCTCTCAAGAGCATCTTATCTGAATTCCTGACGTCCGAAAGAATAGCTAGTGATAAACCTTGTCAAAGCAGGAGAGGGGTGAAGGACATGGAAGTGTttcttgtggg i papAnu2.chr19 C 0 I 5 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e chlSab2.chr6 46982644 33 + 50890351 I a score=26260.000000 s hg38.chr19_GL949753v2_alt 258605 17 + 796479 ttttttaaaagtcctta s panTro4.chr19 59210422 17 + 63644993 ttttttaaaagtcctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56033234 17 + 60714840 ttttttaaaagtcctta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826626 17 - 106955855 ttttttaaaagtcctta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3731278 17 - 64156825 ttttttaaaagtcctta i rheMac3.chr19 I 486 C 0 s macFas5.chr19 55182507 17 + 59248254 TTTTTTTTAAGTCCTTA i macFas5.chr19 I 2 I 267 s papAnu2.chr19 47289779 17 + 51301725 ttttatttACGTCCTTA i papAnu2.chr19 I 5 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e chlSab2.chr6 46982644 33 + 50890351 I a score=591044.000000 s hg38.chr19_GL949753v2_alt 258622 339 + 796479 gaaacagttcttatctgagacgtggaagcatgggcctcctctccttcaggccttcctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtaactttTCTATTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgagagtttcaggaatttggttcaggggagggcttgtttctac-acttttagcaaaagggttaa-tttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtggaaacatgcatctg-tccaacccacagaa s panTro4.chr19 59210439 339 + 63644993 gaaacagttcttatctgagacgtggaagcatgggcctcctctccttcaggccttcctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtaactttcCTCTTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgagagtttcaggaatttggttcaggggagggcttgtttctac-acttttagcaaaagggttaa-tttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctgaagacctcagcttgggttccagcctgcaggtggaaacatgcatctg-tccaacccacagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56033251 338 + 60714840 gaaacagttcttatctgagagctggaagcat-ggcctcgtctccttcaggccttcttggccctgtgtggtctgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGAgtctgcagtgaagggattgggttatgaagtttaacctgagaatttcaggaatttggttcaggggagggattgtttctac-acttttagcaaaacggttaa-tttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtgaaaacatgcatctg-tccagcccacagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826643 340 - 106955855 gaaacagttcttatctgagatgtggaagcatgggcctcctctccttcaggcctttctggccctgtggggtctgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGAgtctgcagtgaagggatggggttacgaagtttaacctgacagtttcaggaatttggttcaggggagggcttgtttccac-acttttagcaaaagggttaa-tttttcagtgttttctagaaacaacctaaagtgctttatcagtacttggggatgctcaagacctcagcttgggttccagcctgcaggtggaaacatgcatctgttccaacccacagaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3731295 341 - 64156825 gaaacagttctcatctgagacctggaagcatgagccttctctccttcaggcctttctggccctatggggtatgagtttgaccaaagtcatctcatccttgcatctgtgactttcCTATTGGGtgtctgcagtgaagggagtgggttacaaagtttaacttgagagtttcaggaatttggttgaggagagggcttgtttctacaataattagcaaaagggttaattttttcagtgttttctagaaacaacctaaagtgctttatcagtacctgggaatattcaagacctccgcttgggttccagcctgcaggtggaaacaggcatctg-tccaacccacagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55182791 339 + 59248254 gaaacagttcttatctgagacctggaagcatgagcgtcttctccttcaggcctttctggccctgtggggtgtgagtttgaccaaagtcatctcatccttgcacctgtgactttcCTATTGGGtgtctgcagtgaaggcactgggttacgaagtttaacctgagagtttcaggaatttggttgaggggagggctcgtttctat-atttttagcaaaagggttaa-tttttcagtgttttctagaaacaacctaaagtgctttatgagtacttggggatgctcaagacctccgcttgggttccagcctgcaggtggaaacaggcatctg-tccaacccacagag i macFas5.chr19 I 267 C 0 s papAnu2.chr19 47289796 338 + 51301725 GAATCAGTTCTTATCTGAGACCTGGAAGCATGAGCCCCCTCTCCTTCAGGCCTTTCTGGCCCTATAGGGTCTGAGTTTGACCAAAGTCATC-CATCCTTGCTCCTGTGACTTTCCTATTGGATGTCTGCAGTGAAGGCACTGGGTTACGAAGTTTAACCTGAGAGTTTCAGGAATTTGGTTGAGGGTAGTgcttgtttctat-atttttagcaAAAGGGTTAA-TTTTTCAGCGTTTTCTAGAAACAACCTAAAGTGTTTTATCAGTATTTGGGGATGCTCAAGACCTCCGCTTGGGTTCCAGCCTGCAGGTGGAAACAGGCATCTG-TCCAACCCACAGAG i papAnu2.chr19 C 0 I 326 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e chlSab2.chr6 46982644 33 + 50890351 I a score=685432.000000 s hg38.chr19_GL949753v2_alt 258961 419 + 796479 cagtcatggccctttgtctcactctcagaacaaggaaaaaagtggaggaaactgtgggacctt--aGAGACTGTGACTCCCCCTCTTCTGTGTTTGTGGACAGACCCTGGGATG-----ACTCAGTGACCCGGGCTACACTCAGCACTGAGCCAC---CTTCCCGGGTGTGCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATCTCTGACCCTGGAGTGTGAGGCTCACATGGACCCCGCCATGCCGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGACACCGCAGGGCAGGAGCGGCTACAGCAATGC-CCTCATCAGCTTTCCTTCCTGAGTCAGCCTGGGGAGAAACCCTATATGGAAGATCAGGTGTG-TGGGAGAAAAACCCACCCCAGAGGAATAAAAATCAaagagtcc s panTro4.chr19 59210778 419 + 63644993 cagtcatggccctttgtctcactctcagaacaaggaaaaaagtggaggaaactgtgggacctt--aGAGACTGTGACTCCCCCTCTTCTGTGTTTGTGGACAGACCCTGGGATG-----ACTCAGTGACCCCGGCCACACTTAGCACTGAGCCAC---CTTCCCGGGTGTGCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATCTCTGACCCTTGAGTGTGAGGCTCGCATGGACCCCGCCATGCTGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGACACCGCAGGGCAGGAGCGGCTACAGCAATGC-CCTCATCAGCTTTCCTTCCTGAGTCAGCCCTGGGAGAAACCCTATATGGAAGATCAGGTGTG-TGGGAGAAAAACCCACCCCAGAGGAATGAAAATCAaagagtcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56033589 422 + 60714840 cagtcatgcccctttgtctctctctcagaacaaggaaaaaagtggaggaaattgtgggaccct--aGAGACTGTGACTCCCCCACTTCTGTGTTTGTGGACAGACCCTGGGATG-----ACTCAGTGACCCTGGCCACACTCAGCACTGAGCCACTTTCTTCCTGGGTGTGCATGACACAGATGCGCTTTATCACTGCTGGACCGGGCATATCTGATCCTTGAGTGTGAGGCTCACATGGACCCCACCATGCTGGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCATGGGCACCGCAGGGCAGGAGCGGCTACAGCAATGC-CCTCATCAGCTTTCCTTCCTGAGTCAGCCCTGGGAGAAACCCTGTATGGAAGATCAGGTGTG-TGGGAGAAAATCTCACCCCAGAGGAATAAAAATCAAAGAGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102826983 419 - 106955855 cagtcatggccctttgtctttctctcagaacgaggaaaaaagtggaggaaactgtgggacctt--aGAGACTGTGACTCCCCCTCTTCTGTGTTTGTAGACAGACCCTGGGATG-----ACTCAGTGACCCTGGCCACACTCAGCACTGAACCAC---CTTCCTGGGTGTTCATGACACAGATGCGCTTTATCATTGTTGGACCGGGCATATCTGACCCTTGAGTGTGAGGCTCACATGGACCCCGCCATGCCAGGCATAACACAGAGGTGATTCTAAGCTTGGGAGCGTGGACGCCGCAGGGCAGGAGCAGCTACAGCAATGC-CCTCATCAGCTTTCCTTCTTGAATCAGCCCTGGGAGAAACCCTGCATGGAAGATCAGGTGTG-TGGGAGACAAACCCACCCCAGAGGAATAAAAATCAAAGAGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3731636 425 - 64156825 cagtcatggcactttgtctctctctcagaacaaagcaaaaagtgtaggaaaccatgggaccctaGAGAGACTGTGTTTCCCCCTCTTCTGTATTTATGGACAGACCCTGGGATAGCTCCGCTCAGTGACCCCAGCCACACTCAGCACTAAGCCAC---TTTCCCGGATGGGCATGACACAGACTCACTTTATCATTGCTGGACCGGGCATCTCTCGCACATGAGTGTGAGACTCACATGGGCCCCACCATGCGGGGCACAACACAGAGCTGATACTAAGCTTGGAAGCATGGACACTGCAGGGTAGAAGCGGCTACAGCAATGCTCCTCCTCAGCTTTCATTCCTGAGTGAGCCCTGGGAGAAA--CTGTATAGAAGATCACGTGTA-TAGGAGAAAACCCCACCcaagagaaataaaaatcaaagtgccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55183130 420 + 59248254 cagtcgtggcactttctctctctctcagaacaaggaaaaaagtggaggaaactgtgggacctt--aGAGACTGTGGCTCTCCGTCTTTTGTGTTTGTGGACAGACCCTGGGATA-----ACTCAGTGACCCAGGCCACACTCAACACTGAGCCAC---CTTCCTGGGTGCACACGACACAGACTTGCTTTATCATTGTTGGACTGGGCGTATCTGGCACTTGAGTGTGAAGGTCACATGGACCTCGCCATGCTGGGCATAACAAGGAACTGATTCAAAACTTGGGAGTGTGGACACTGCAGGGCAGGAGTGGCTACAGGAATGC-CCTCATCAGTTTTCATTCCTGAGTCAGTCCTGGGAGAAACCCTGTATGGAAGATCATGTGTGTTGGGAGAAAAACCCACCCCCGAGGAataaaaatcaaacagtcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47290460 419 + 51301725 cagtcatggcactttctctctctctcagaacaAGGAAAAAAGTGGAGGAAACTGTGGGACCCT--AGAGACTGTGGCTCTCCGTCTTTTGTGTTTGTGGACAGACCCTGGGATA-----ACTCAGTGACCCAGGCCACACTCAACACTGAGCCAC---CTTCCCGGGTGCACACGACACAGACTTGCTTTATCATTGTTGGACCAGGTGTATCTGGCACTTGAGTGTGAAGGTCACACAGACCCCGCCATGCTGGGCATAACACGGAGCTGATTCTAAACTTGGGAGCGTGGACACCGCAGGGCAGGAGTGGCTACAGGAATGC-CCTTATCAGTTTTCATTCCTGAGTCAGCCCTGGGAGAAACCCTGTATGGAAGATCATGTATG-TGGGAGAAAAACCCACCCCAGAGGAATAAAAATCAAACCGTCC i papAnu2.chr19 I 326 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45546147 17017 + 49145316 T e chlSab2.chr6 46982644 33 + 50890351 I a score=49717.000000 s hg38.chr19_GL949753v2_alt 259380 24 + 796479 gttagag-aaaaaacaggcaattgt s panTro4.chr19 59211197 24 + 63644993 attagag-aaaaaacaggcaattgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56034011 24 + 60714840 GTTAGAG-aaaaaacaggcaattgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102827402 25 - 106955855 GTTAGagaaaaaaacaggcaattgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3732061 24 - 64156825 attacag-aaaaaacaggcaactat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55183550 24 + 59248254 attagag-aaaaaacaggcaactat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47290879 24 + 51301725 ATTAGAG-AAAAAACAGGCAATTAT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45529130 24 + 49145316 attagag-aaaatacaggcgattac i calJac3.chr22 T 17017 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e chlSab2.chr6 46982644 33 + 50890351 I a score=925788.000000 s hg38.chr19_GL949753v2_alt 259404 337 + 796479 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacaagacacagctgaaatgataaacattgtattggtgtagaatatttactaaaatttttcattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgaaaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtt s panTro4.chr19 59211221 336 + 63644993 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacaagacacagctgaaatgataaacattgtattggtgtagaatatttatt-aaatttttcattagtcatcggagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacaccttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56034035 337 + 60714840 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaacgagacacagctgaaatgataaatattgtattggtgtagaatatttattaaaattttccattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaACATGAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102827427 337 - 106955855 agaaatgaattaggaagctattgtgatgtg-aaaatagtaaattatattaacacatttagaaataatttcatccagaatgagacacagctgaaatgataaacattgtattggtgtagaatatttattaaaatttttcattagtcatcagagaaaaactagaaatgaaaaaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctttggatcacactttcagaatgaaggaaataaggagtatgttattcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3732085 332 - 64156825 agaaatgaattaggaagctattgtgatgtgaaaaatagtaaatcatatcagcacatttagaaataattgcatcaaggacaagacagagctgaaatgatgaacattgtattggtgtggaatatcagtt-aaatttttcattagtcatcagagaaaaactagaaatgaataaaatagaaaacataattaatgcgcacaagaaacagaat--ggagaggaaacagatatctctctatgtgtcacactttcagaatgaaggaaat---gagtatgttagtcagtaaatacttgcaaagaaaatggttgacatttttatagaaatgaagaaagaacatgagtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55183574 333 + 59248254 agaaatgaattaggaagctattgtgatgtgaaaaatagtaaattatattaacacagttagaaataatttcatcaagaatgagacacagctgaaacaataaacattgtattggtgtagaatatttattaaaatttttcattagtcatcagagaaaaactagaaataaa-aaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaaacagatatctctctatagatcacactttcagaatgagggaaataaggagtatgtt----agtaaatacttgcaaagaaataagttgacatttttacagaaatgaagaaagaacatgagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47290903 334 + 51301725 AGAAATGAATTAGGAAGCTATTGTGATGTGAAAAATAGTAAATTATGTTAACACAGTTAGAAACAATTTCATCAAGAATGAGACACGGCTGAAACAATAAACATTGTATTGGTgtagaatatttattaaaatttttcactagtcatcagagaaaaactagaaatgaaaaaaatagaaacaataattaATGCACACAAGAAATGGaatgagaagaggaaacagaTATCTCTCTATAGATCACACTTTCAGAATGAGGGAAATAAGGAGTATGTT----AGTAAATACTTGCAAAGAAATAAGTTGACATttttacagaaatgaagaaagaacatgAGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46982677 337 + 50890351 agaaatgaattaggaagctattgtgatgtgaaaaattataaattatattaacacagttagaaataatttcatcaagaatgagacacagctgaaacaataaatatcgtattggtgtagaatatttattaaaatttttcatcagtcatcagagaaaaactagaaatgaa-aaaatagaaaagataattaatgcacacaagaaatggaatgagaagaggaagcagatatctctctatagatcacactttcagaatgagggaaataaggagtatgttagtgagtaaatacttgcagagaaataagttgacatttttacagaaatgaagaaagaacatgagtt i chlSab2.chr6 I 33 C 0 s calJac3.chr22 45529154 324 + 49145316 agaaatgaattaggaaaccatagtgacgtg-aaaatagtgaatgacatcaacaaatttagaaataatttcatccagaacaagacacagctaaaatgataaatatcatattggtgctgagtatttatt-ctctttttcagaagccatcacagaaaccctagaaatgaaaaaaaaagaaaagaaaattaatgtgcgc-agaaatagaatgagaagagtaaacagacatcgctct----gtcacaatttcagagcgaaggaaa---ggagtatgtt----agtaaacacttgcagagaaaatagttgacatttgtacagaaatgaagaaagaacatgaact i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I a score=332853.000000 s hg38.chr19_GL949753v2_alt 259741 163 + 796479 taacgtgaacaaattcataaataacatcaatgtcttaactatgatagagtaaaagatacctagaatagatacaaagtaattttaaaactactggagaaaatgaaaattattgtccaatgaaagacaagcacattgggactggatttcccaagagtaaaaagtg s panTro4.chr19 59211557 163 + 63644993 taacgttcacaaattcataaataacatcaatgtcttaactatgatagagtaaaagatacctagaatagatacaaagtaattttaaaactactggagaaaatgaaaattattctcaaatgaaagacaagcacattgggaccggatttcccaagcgtaaaaaGTG i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56034372 163 + 60714840 TAACGTGCACAAATTCATAAATAACATTAATGTCTTAACTATGATAGAGCAAATGATACCTAGAATAGATACAAAGTAATTTTAAAACTACTGGAGAAAATGAAAATTATTCTCAAATGAAAGACAAGCACATTGGGACCGGATTTCCCAAGAGTAAAAAGTG i ponAbe2.chr19 C 0 I 5693 s rheMac3.chr19 3732417 163 - 64156825 taccggaaacaaattaataaataaaattaatgtcttaactatgatagagtaaaagctacctagaatagattaaaagtaattttaaaattactggagaaaataaaaactattctcaaaggaaagaggagcacattgggactggatttcccaagagtaaaaagtg i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55183907 163 + 59248254 taatgtgcataaactcataaataacattaatgtcttaactatgatagagcaaacaatacctagaatagatacaaagtaattttaaaattactggagaaaatgaaaattattctcaaatgaaagacaagcacgttgggactggatttcccaagagtaaaaaGTG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47291237 163 + 51301725 TAATGTGCATAAACTCATAAATGACATTAATGTCTTAACTATGATAGAGCAAACAATACCTAGAATAGatacaaagtaattttaaaattactggagaaaatgaaaattattctcAAATGAAAGACAAACACATTGGGACTGGATTTCCCAAGAGTAAAAAGTG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46983014 163 + 50890351 taatgtgcataaactcataaataacattaatgtcttaactatgatagagcgaacaatacctagaatagatacaaagtaattttaaaattactggagaaaatgaaaattattctcaaatgaaagacaagcacgttgggactggatttcccaagagtaaaaaGTG i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45529478 159 + 49145316 caatgtgcacaaattcatcaatgaaatgaacgtcttaactatg-tagagtgaagggcatctagaataaaca-acagtaatttaaaaaccaat-gaaaaaacgaaaTTTATTCTCAAAT-AATGCCAATCTCATGAGGACTGGATTTCCAAAGAGTATGAAGTG i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C a score=300373.000000 s hg38.chr19_GL949753v2_alt 259904 189 + 796479 -caagAAAATGACTGGGGGCTgaggttcaagttggctgaatggaaagggctggagtctgcc-tactcactaagaggacccaaaatagcgagtaaataccaacaggtcaagtggatcttcca--agaggatgctggggttcacctgagaaa---------catgaggacatggagagaagagaagagaaaaggtgggagccag s panTro4.chr19 59211721 189 + 63644993 -CAAGAAAATGACTGGGGGTTGAggttgaagttggctgagtggaaagagctggagtctgcc-tactcactaagaggacccaaaatagtgagtaaataccaacaggtcaagtggatcttcca--agaggatgctggggctcacctgagaag---------caggaagacatggagagaagagaagagaaaaggtgggagccag i panTro4.chr19 I 1 C 0 s rheMac3.chr19 3732581 189 - 64156825 -caagaaaatgACTGGGGGTTGAggttccagttggctgaatggaaagggctggagtctgcc-tgctcaccaagaggacccaaaatggcaagtaaataacaacaggtcaagtggatcttcca--agaggatgctggggttcacctgagaac---------catgaggacacgtagagaagagaagagaaaaggtgggagccag i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55184071 189 + 59248254 -CAAGAAAATGACTGGGGGTTGAAgttccagttggctgaatggaaagggctggagtctgcc-tgctcaccaagaggacccaaaatggcaagtaaataacaacaggtcaagtggatcttcca--agaggatgctggggttcacctgagaac---------catgaggacacgtagagaagagaagagaaaaggtgggagccag i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47291401 189 + 51301725 -CAAGAAAATGACTGGGGGTTGAAGTTCCAGTTGGCTGAATGGAAAGGGCTGGAGTCTGCC-TACTCACCAAGAGGACCCAAAATGGCGAGTAAATACCAACAGGTCAAGTGGATCTTCCA--AGAGGACGCTGGGGTTCACCTGAGAAC---------CATGAGGACacggagagaagagaagagaaaaggtggGAGCCAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46983178 189 + 50890351 -CAAGAAAATGACTGGGGGTTGAAGTTCCATTtggctaaatggaaagggctggagtctgcc-tactcacaaagaggacccaaaatggcgagtaaataccaacaggtcaagtggatcttcca--agaggacgctggggttcacctgagcac---------catgaggacacagagagaagagaagagaaaaggagggagccag i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45529637 202 + 49145316 CTGAAAAAATGCCTGTGGGTTCAGGCTCATGTtggctgaatggaagcaggtggtgtgtgccgttctcatagagaggaaccaaaatggtgaggaaataccaacacgttaagcggatgttctaagagaggatgctggggtgcaccagagaaccccagaaagcagagggacacagaaagcagagaagagatgagctgagagccag i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56034535 5693 + 60714840 I e nomLeu3.chr10 102827764 0 - 106955855 C a score=58299.000000 s hg38.chr19_GL949753v2_alt 260093 25 + 796479 gagaggctcc-taacacggggaaggg s panTro4.chr19 59211910 25 + 63644993 gagaggctcc-taacacggggaaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56040228 26 + 60714840 gagaggctccttaacagagggaaggg i ponAbe2.chr19 I 5693 C 0 s rheMac3.chr19 3732770 25 - 64156825 gagaggctcc-taacacggggaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184260 25 + 59248254 gagaggctcc-taacatggggaaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47291590 25 + 51301725 GAGAGGCTGC-TAACACGGGGAAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46983367 25 + 50890351 gagaggctcc-taacacggggaaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45529839 25 + 49145316 gagaggctcc-taacacaaggaaggg i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C a score=134204.000000 s hg38.chr19_GL949753v2_alt 260118 112 + 796479 gtgagtgagtgagagattcaccaacacggggaaggggtgagtgagtgagagattccccaacacggggaaggggtgagtgagtgagagGATCCCTAACACGGGGAAGGTGTGA s panTro4.chr19 59211935 110 + 63644993 gtgagtgagtgagaggctc-TTAACACAGGGAAGGGGTGAGTGAGTgagagattccctaacacggggaaggggtgagtgagtgagaggct-ccTAACACGGGGAAGGGGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56040254 111 + 60714840 gtgagtgagtgagagattccctaacacggggaaggggtgagtgagtgagaggct-ccTAACACGAGGAAGGGGTGAGTGAGTgagagattccctaacagggggaaggggtga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3732795 104 - 64156825 gtgagtga-tgagagg---cctaacatggggaaagggtgagtgagtgagagATtccctaacacggggaaggggtgagtgagtgagaggcctcCTAACAAGGGGAAGGG---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184285 108 + 59248254 gtgagagagtgagagattccctaacacggggaaagggtgagtgagtgagagattctctagcatggggaaggggtgagtgagtgagaggccTCCTAACAAGGGGAAGGG---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47291615 71 + 51301725 GTGAGTGA-TGAGAGATTCCCTAACACAGGGAAGAGGTGAGT------------------------------------GAGTGAGAGGCCCCCTAACAAGGGTAAGGG---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46983392 111 + 50890351 gtgagtga-tgagagattccctaacatggggaagcgatgagtgagtgagagATTCCCTAACACGGGGAAGGGGTGAGAGAGTgagagattccctaacacggggaaggggtga i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e calJac3.chr22 45529864 0 + 49145316 C e nomLeu3.chr10 102827764 0 - 106955855 C a score=74936.000000 s hg38.chr19_GL949753v2_alt 260230 80 + 796479 GTGAGTgagaggatccctaacacggggaaggggtgaatgagtgagagc--------------------------------ctccctaacacagggaaggggtgagtgagtga s panTro4.chr19 59212045 80 + 63644993 GTGAGTgagagattccctaacacggggaaggggtgagtgagtgagaga--------------------------------ttccctaacacggggaaggggtgagtgagtga i panTro4.chr19 C 0 I 2356 s ponAbe2.chr19 56040365 80 + 60714840 gtgagtgagaggccccCTAACACGGGGAAGGGGTGAGTAAATgagagc--------------------------------atccctaacacggggaaggggtgagtgagtga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3732899 44 - 64156825 ------------------------------------GTGAGTgagagg--------------------------------ctccttaacagagggaaagggtgagtgggtat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184393 44 + 59248254 ------------------------------------GTGAGTgagagg--------------------------------ctccttaacaaagggaaagggtgagtgggtat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47291686 44 + 51301725 ------------------------------------GTGAGTGAGAGG--------------------------------CTCCTTAACAAAGGGAAAGGGTGAGTGGGTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46983503 112 + 50890351 gcaagtgagagattctctagcatggggaaggggtgagtgagtgagaggccccCTCACAAGGGGAAGGGGTGAGTgagaggctccttaacaaagcgaaagggtgagtgggtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45529864 69 + 49145316 gtgagtaaggggctccctgaaaaggagaaggg--------gtgagagg--------------------------------ccccctaacatggggaagaggtgaaggag--- i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C a score=433580.000000 s hg38.chr19_GL949753v2_alt 260310 272 + 796479 ggggtccctggcatctacacctctgctgtgggcccttaggatcctgcccacaggagagcgcctgtcccctctgggcctccagaggcccacagttttctcctggagactgtaccaaggccccactggagcccacgtggaatcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcagggagggaggaggccaggcacctctgtgggccccagaataagtatgacagctggggcacaggagcagccaagctgagc s ponAbe2.chr19 56040445 272 + 60714840 gaggtccctggcatctacacctctgccgtgggctcttaggatcctgcccacaggagagcgcctgtcccctctgggcctccagaagcccacagtttgctcctggagactatatcaaggccccgctggagcccacgtggaatcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcagggagggagggggccaggcacctctgtgggccccagaataaatatgacagctggggcacaggagcagccaagctgagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3732943 272 - 64156825 gaggcccctgggatccacacccctgccttggccctttacaattctggtcacaggagagcccctgaccccccttggcctgcagaggcacacagggagttcctggagatggtgcagaggcacctctggagcccacgtggagtcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcagggagggaggaggccaggcacctctgtgggccccagaatCAATATGACAGCTGGGGCACAGGAACAGCGAAGCTGAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184437 272 + 59248254 gaggcccctgggatccacacccctgccttggccctttacaattctggtcacaggagagcccctgaccccccttggcctgcagaggcacacagggagttcctggagatggtgcagaggcacctctggagcccacgtggagtcccacaggcttctgatccctgagcagcctgggtccagctgccactgccttagcaaggagggaggaggccaggcacctctgtgggccccagaatCAATATGACAGCTGGGGCACAGGAACAGCGAAGCTGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47291730 272 + 51301725 GAGGCCCCTGGGATCCACACCCCTGCCTTGGCCCTTTACAATTCTGGTCACAGGAGAGCCCCTGACCCCGCTTGGCCTGCAGAGGCACACAGGGAGTTCCTGGAGATGGTGCAGAGGCGCCTCTGGAGCCCACGTGGAGTCCCACAGGCTTCTGATCCCTGAGCAGCCTGGGTCCAGCTGCCATTGCCttagcagggagggaggaggccagGCACCTCTGTGGGCTGCAGAATCAATATGACAGCTGGGGCACAGAAACAGCCAAGCTGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46983615 272 + 50890351 gaggcccctgggatccacacccctgccttggccctttacaattctggtcacaggagagcccctgaccccccttggcctgcagaggcacacagggagttcctggagatggtgcagaggcgcctctggagcccacgtggagtcccacaggcttctgatccccgagcagcctgggttcagctgccattgccttagcagagagggaggaggccaggcacctctgtgggccccagaatcaatatgacagctggggcacaggaacagccaagctgagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45529933 267 + 49145316 --agcccctggcatccacccctctgctgtggactcttacaatcctgctcacaggagagtacctg-cccctctgggcctccaggggcacacaggttgctcctagagagtgtgctgaggccccactggag-ccacatggaatcccataggctttccatccctgagcaacctggctccagctgcccctgcctttccatggagggaggaggccaggcacttccacggacctcagaataAATATGACAACTGGGGTACAG-AGCAGCCAAGTTGAGC i calJac3.chr22 C 0 I 17162 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C e panTro4.chr19 59212125 2356 + 63644993 I a score=63788.000000 s hg38.chr19_GL949753v2_alt 260582 57 + 796479 accacacagctgcccacctctgttgcttcct----gcgaaatggggcttccttcctgc--------------------------------------------------------------taa s ponAbe2.chr19 56040717 57 + 60714840 accacacagctgtccacctcTGTTGCTTCCT----GCTAAATGGGGCTTCCTTCCTGC--------------------------------------------------------------TAA i ponAbe2.chr19 C 0 I 21 s rheMac3.chr19 3733215 119 - 64156825 ACCACACAGCTCCCCACCTCTGTTGTGTCCT----GCTAAATTGGGCTTCCTTCCTGTTAAATTGGGCGTCCTTCCTGTTAATGGGGCTTCCTTCCTGCTAAATGGGGCTTCCTTCCTGCTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184709 57 + 59248254 ACCACACAGCTCCCCACCTCTGTTGTGTCCT----GCTAAATTGGGCTTCCTTCCTGT--------------------------------------------------------------TAA i macFas5.chr19 C 0 I 189 s papAnu2.chr19 47292002 56 + 51301725 ACCACACAGCTCCCCACCTCTGTTGTGtcct----gct-aatggggcttccttcctgc--------------------------------------------------------------taa i papAnu2.chr19 C 0 I 124 s chlSab2.chr6 46983887 57 + 50890351 accacacagctccccacctctgttgcttcct----gctaagtggggcttccttcctgt--------------------------------------------------------------taa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45547362 60 + 49145316 ACCCCACAGCTCCCCATC-CTACCGTTCTCTTCGAGCAAAAAGGGGCATCTATCAAGC--------------------------------------------------------------TAT i calJac3.chr22 I 17162 I 1 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C e panTro4.chr19 59212125 2356 + 63644993 I a score=678942.000000 s hg38.chr19_GL949753v2_alt 260639 420 + 796479 tggggcttgccagctgcagggcctcagtgcacccgtcctgcccccacccgaacaccgtggccctggctcggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccct--gctgccccaggcccagggagggtgtggggaggcctggcactttcacgtgtccccag-agcaaaaccgagtgacacttcttcaggagggaagtgtgagcgggccctgtgcctcacagctgccagtctccagtgccccagccgaggggcgctgccctccctagtgacaggcccacagctcagccaccctgcccccacctggacatttcagCTGCAGCCCCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCC-GCAGGCTCTACCAC s ponAbe2.chr19 56040795 418 + 60714840 TGgggcttgccagctgcagggccccagtgcacccatcctgcccccacctgaacaccgtg-ccctggctcggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccct--gctgccccaggcctagggagggcgtggggaggcctggcactttcgtgtgtccccaacagcaaaaccgagtgacgcttcttcaggagggaagtgtgagcaggccctgtgccccacagctgccagtctccagtgccccagcagaggggccctgccctctctagtgacaggcccacagcacagccgccctgcccccacctggacatttcagCTGCAGCCCC-AGCCCTTCTGAGAGCCCAGTCCCCACGGGCCTGTGATCTGCC--CAGGCTCTACCAC i ponAbe2.chr19 I 21 M 3000 s rheMac3.chr19 3733334 424 - 64156825 TGGGGCTTGCCAGCTGCACGGCCCCAGTGCACCCGTCCTGCCCCCACCTGAACACCGTGGCCCTGGCTTGGTGCCCTTTGAAAGCCCAGTGATCAGAGGCCCCTGGCAAGCCCTTTGCAGTCACTGCCACCTCTGCCTCTGCTCCTAGGCTGCCCCAGGCTCAGGGAAGGTGTGGGGAGGCCTGACACTTTCACGTGTCCCCAACAGCAAAACCGAGTGCCACTTCTTCAGGAGGGAAGTGTGAGCAGACCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCGGAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACGGCCGCCCTGCCCCGACCTGGACATTTCAGCTGCAGCCCCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGTTCCAACAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55184955 424 + 59248254 TCgggcttgccagctgcagggccccagtgcacccgtcctacccccacctgaataccatggccccggcttggtgccctctgaaagcccaatgctcagagacccctgacaagccctttgcagtcactgccacctctgcctctgcccctaggctgccccaggctcagggagggtgtggggaggcctggcacttttgcatgtccccaacaGCAAAACCGAGTGCCACTTTTTCAGGTGGGCAGTGTGAGCGGGCCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCCAAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACAGCCACCCTGCCCCCACCTGGACATTTCAGCTGCAGCCTCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i macFas5.chr19 I 189 C 0 s papAnu2.chr19 47292182 424 + 51301725 TGGGGCTTGCCAGCTGCAGGGCCCCAGTGCACCCGTCCTGCCCCCACCTGAACACCGTGGCCCTGGCTTGGTGCCCTCTGAAAGCCCAATGCTCAGAGGCCCCTGACAAGCCCTTTGCagtcactgccacctctgcctctgcccctaGGCTGCCCCAGGCTCAGGGAAGGTGTGGAGAGGCCTGACACTTTCGCGTGTCCCCAACAGCAAAACCGAGTGCCACTTCTTCAGGAGGGAAGTGTGAGCAGACCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCGGAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACGGccgccctgcccccacctggccATTTTGGCTGCAGCCCTCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i papAnu2.chr19 I 124 C 0 s chlSab2.chr6 46983944 424 + 50890351 tggggcttgccagctgcagggccccagtgcacccgtcctacccccacctgaacaccgtggccctggcttggtgccctctgaaagcccaatgctcagaggcccctgacaagccctttgcagtcactgccacctctgcctctgcccctaggctgccccaggcgtagggagggTGTGGGGAGGCCTGGCACTTTTGCGTGTCCCCAACAGCAAAACCGAGTGCCACTTCTTCAGGAGGGCAGTGTGAGCAGACCCTGTGCCCCACAGCTGCCAGTCTCCAGTGCCCCAGCCAAGGGGCCCTGCCCTCCCTAGTGACAGGCCCACAGCACAGCCGCCCTGCCCCCACCTGGACATTTCAGCTGCAGCCCCCAGCCCTTCTGAGAGCCCAGTCCCCACAGGCCTGTGATCTGCCCACGGGCTCTACCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45547423 413 + 49145316 TGGAGTTTGCCCCCTTAACGGCCACGGTGCACCTCTTCTGTCCCCACCGGAACCCTGTGGACATGCCCGGTTGCCCTCT-CACGCCCAATGCCCACATCCTCCTGACAATCCCTATACGTTCCCTGCCACCTCTGCCTCGGGCCTT--CTTTCTCCAACCCCTGGGAAAGTGTGGGGAGACCTGGCACTTATGCTGATCCCCAA-AGTAAGACCAAGTGCTCCCTCTTCAGGAGGGAAGTGTGAGCGGGCCCTGGGCC-CACCCCTGCTAGTCTCCAGTGCCCCAGCCGAGGGGC-CTGCTGTCTTCAGGGACCGGCCCAGAGCACAGCTGCCTGGCCTCTACCTGGACATTTCAGCCTCAGCCCC-----TTTCTGATAGCCCAGTCCCCACAGGCCTGTGATCTGCCCCCAGGCTCTACCCC i calJac3.chr22 I 1 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e nomLeu3.chr10 102827764 0 - 106955855 C e panTro4.chr19 59212125 2356 + 63644993 I a score=65119.000000 s hg38.chr19_GL949753v2_alt 261059 53 + 796479 CTGAGCCTTctgcctgccccgcctgaaggttctgccggtgacctggggaccag s rheMac3.chr19 3733758 53 - 64156825 CTGAGCCTTCTGCCTGTCCTGCCTGAGAATTCTGCCTGTGACCTGGGGACCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55185379 53 + 59248254 CTGAGCcttctgcctgtcccgcctgagaattctgcctgtgacctggggaccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47292606 53 + 51301725 CTGAGCCTTCTGCCTGTCCTGCCTGAGAATTCTGCCTGTGACCTGGGGACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984368 53 + 50890351 CTGAGCCTTCTGCCTGccccgcctgataattctgcctgtgacctggggaccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45547836 53 + 49145316 CTGAGAATTCTGCCTGccccacctgagagttctgccagtgacctggacaccag i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e nomLeu3.chr10 102827764 0 - 106955855 C e panTro4.chr19 59212125 2356 + 63644993 I a score=145048.000000 s hg38.chr19_GL949753v2_alt 261112 88 + 796479 cccatccctccccatcacagccagcatctgaaccctggagcagccgaaacccagtccagccccttcaggactcacacacgctgtccag s panTro4.chr19 59214481 88 + 63644993 cccatccctccccatcacagccagcatctgaaccccggagcagccgaaacccagtccagccccttcaggactcacacacgctgtccag i panTro4.chr19 I 2356 C 0 s rheMac3.chr19 3733811 88 - 64156825 CCCAGCCCTCCCCATCACAGCCAGCACCTGAAGCCTGGAACAGCCGAAACCCAGTCAAGCTCCTACAGGACTCGCACACACTGTCCAG i rheMac3.chr19 C 0 T 79304 s macFas5.chr19 55185432 88 + 59248254 cccagccctccccatcacagccagcacctgaagcctggaacagccgaaacccagtcaagctcctacaggactcgcacacactgtccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47292659 88 + 51301725 CCCAGCCCTCCCCATCACAGCCGGCACCTGAACCCTGGAAGAGCCGAAACCCAGTCAAGCCCCTACAGGACTTGCACACACTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984421 88 + 50890351 cccagccctccccatcacagccggcacctgaaccctggaagagccgaaacccagtcaagcccctacaggactcacacacactgtccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45547889 88 + 49145316 tccatttctcctcatcacagccggcacctgaaacctggaacagtggaatcccattccagcccctttgggactcacacacgctgttcag i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e nomLeu3.chr10 102827764 0 - 106955855 C a score=301480.000000 s hg38.chr19_GL949753v2_alt 261200 262 + 796479 ccggccacctaggggcctgtgatcc-gggaactacctgccctttcctacc-tgctggcacctgaccactcaccccagggcctgaggtcgggcccacccagccagcaacaccaccacaactgatgtccactcTCCCATCCAGAGAGGCAGAA-GCcccacatcccacctacatgaagca-----gctaccacgtcagacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaatcacgcctgcagagag s panTro4.chr19 59214569 261 + 63644993 ccggccacctaagggcctgcgatct-gggaactacctgccctttcctaccctgctggcacctgaccactcaccccagggcctgaggtcgggcccacccagccagcaacaccaccacaactgacgtccactcTCCCATCCAGAGAGGCAGAA-GCCCCACATCCCACCTACATGAAGCA-----GCTACCACGTcagacaa--gacagctgctcagggtctccactgggctgagggaggaggctctgccttggaaccacgcctgcagagag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55185520 264 + 59248254 ccggccacctaggggcctgcaatcc-gggaactgcctgccctttcctactctgctggcacctgaccagtcaccccagggcctgaggtcgggcccacccagccggtaacaccaccacaactgacgtccactcTCCCATCCAGAGACgcagaaccccccacatcccacctacatgaagca-----gctgccacgtcggacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaaccatgactgcagagag i macFas5.chr19 C 0 I 109 s papAnu2.chr19 47292747 264 + 51301725 CCGGCCACCTAGGGGCCTGCGATCC-AGGAACTGCCTGCCCTTTCCTACTCTGCTGGCACCTGACCAATCACCCCAGGGCCTGAGGTCAGGCCCACCCAGCTGGTAACACCACCACAACTGACGTCCACTCTCCCATCCAGAGACGCAGAACCCCCCACATCCCACCTATATGAAGCA-----GCTGCCACGTCGGACAACGGAAGGCCACTCAGGGTCTGCACTGGGCTGAGGGAAGAGGCTCTGCCTTGGAACCATGCCTGCAGAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984509 264 + 50890351 ccggccacctaggggcctgcaatcc-gggaactgcctgccctttcctaccctgctggcacctgaccagtcaccccagggcctgaggtcgggcccacccagccggtaacaccaccacaactgacgtccactcTCCCATCCAGAGACGCAGAACCCCCCACATCCCACCTACCTGAAGCA-----GCTGCCATGTcagacaacagacagccgctcagggtctgcactgggctgagggaggaggctctgccttggaaccatgtctgcagagag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45547977 261 + 49145316 ctggccacctagaggcctgtgatccagggaactgccagccctttcccactctgctggcacctgaccactcaccccagggcctgaggtcgggtctccccagccagcaa---caccacaactgatgtccacTTCTCCACCCAGAAAGGTAGAA-GCCCCACATCCCAGCTACATGAAGCACCAGTGTGACCATgacagac-atggacagcag----gtgtctacgctgtgctgagtgaggaggttctaccttgggatgattcctgcagagag i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 3733899 79304 - 64156825 T a score=924724.000000 s hg38.chr19_GL949753v2_alt 261462 858 + 796479 tggcaaggcaggtgtttcccactgccctcagccacactgtggcctggggagagacaagagtgtgtgtctgaactgagactcatgagccctggagcacgggtgtgatagggagacagacaacgttcctccctat--gggactggaaacgg-tgtagctccttcac------------cccccgcagagacctcagggcatttcactaggagctgctccagccatgtccatcaggactagtgcctgcactcatcactggga---tatctgtgggcaagccgggggttccagctctgcccaggggtgttccctcgcccctgtggaacaggaagctcagggcacctgacactccacggtccagcccttcccctgaaacaagagtcagcacctcacaggaaacacaccaggtccacatccacctgcttgtgccgagcgtggctcttacccttaagcaccagctcctggcctgcaatctgagctgcacagcccaatgcaaaccctgctgcagaagctcccaaagccat--gggaaaagccaaaagacccttcccaacatgctctacagtcaccctccctgcgggg-ctgggggaaaatgtgcaaaagaaatcccatccaaacgaaaataaattcgaagagagtaagtggaggcctctccagatgagaaggaatcagtgtaaggattctgacgccgtgaaaaatctgaatattgtggcaccaccaaaggatcgcactggctcgctagtgatggatgctgaaaacaatggaaactctgaaaggacagataaagaatgagactgacacaaaaacattacaaagaatcaatgaaagaaaacgttggttttttgaaagtataaataaaattgagagatggctgactacac s panTro4.chr19 59214830 857 + 63644993 tggcaaggcaggtgtttcccatggccctcagccacactgtggcctggggagagacaacagtgtgtgtctgaactgagactcatgagccctggagcacgggtgtgatagggagacagacaacgttcctccctat--gggactggaaacgg-tgtagctccttcac------------cccccgcagagacctcagggcatttcactaggagctgctccagccctgtccatcaggactagtgcctgcactcatcactggga---tatctgtgggcaagccggggattccagctctgcccaggggtgttccctcgcccctgtggaacaggaagctcagggcacctgacactccacggtccagcctttcccctgaaacaacagtcagcacctcacaggaaacacaccaggtccatatccacctgcttgtgctgagggtggctcttactcttaagcaccagctcctggcc-gcaatttgagctacacagcctgacacaaaccctgctgcagaagcacccaaagctat--gggaaaagccaaaagacccttcccaacatgctctacagtcaccctccctgcgggg-ctgggggaaaatgcgcaaaacatatcccatgcaaacgaaaataaattcgaagagagtaagtggaggcctctccagatgagaaggaatcagtgtaaggattctgacgccgtgaaaaatctgaatattgtgacaccaccaaaggatcgcactagctcgctagcaatggacgctgaaaacaatggaaactgagaaaagacagataaagaatgagactgacacaaaaacattacaaagaatcaatgaaagaaaacgttgattttttgaaagtataaataaaattgagagatggctgactacac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55185893 860 + 59248254 tggcaaggcaggtgtttcccacggctcccagccacaccgtggcctggggagagacaacagtgtgagtctgaactgagactcacgagccctggagcaggggtgtgatagggaaacagacaatgttcctccttat--gggactggaagcggatgtagctccttcat------------cccctgcagagacctcagggcattttaccaggcgctgccccagccatgtccatcaggactggtgcctgcactcatcattagga---tattcgtgggcaagccaggggttccagctctgccccgctgtgttccctcaccccgttagaacaggaagctccgggctccagacactccacggtccagcccttccgctgaaacgacagacagcacctcacaggaaacacgccaggtccatatgcacctgcttgtgctgagggtggctcttacccttaagcaccagctcccggcctgcgatttgaactgaacagcccaacacaaaccgtgctgcagaagcgcccaaggctatggggaaaaagccaaaagacccttcccagcatgctctgcagtcacgctccccgcggggccggggggaaaatgcgcaaaagaaatcccatccagatgaaaataaattcaaagagagtaagtggcagcctctccagatgagaaggaatccgtgcaaggatcctgacgccgtgaaaaatctgaatattgtggcaccaccaaaggatcgcactagctctctagcgatggacgctgaaaacaacggaaactcagaaaggacagataaagaatgagacagagaaaaaaacattacaaagaatcagtgaaagaac--gttggttttttaaaagcataaataaaattgagagatggctgactacac i macFas5.chr19 I 109 C 0 s papAnu2.chr19 47293011 855 + 51301725 TGGCAAGGTGGGTGTTTCCCACGGCTCCCAGCCACACCGTGGCCTGGGGAGAGACAACAGTGTGAGTCTGAACTGAGACTCAGGAGCCCTGGAGCAGGGGTGTGACAGGGAAACAGACAATGT---CCCCTAC--GAAACTGGAAGCGGATGTAGCTCTTTCAT------------CCCCAGCAGAGACCTCAGAGCATTTCACCAGGTGCTGCCCCAGCCACGTCCATCAGGACTGATGCCTGCACTCATCATTAGGA---TATTCGTGGGCAAGCCAGGGGTTCCAGCTCTGCCCCGCTGTGTTCCCTCACCCCGATGGAACAGGAAGCTCAGGGCTCCAGACACTCCACGGTCCAGTCCTTCCCCTGAAACGACAGACAGCACCTCACAGGAAACACGCCAGGTCCATATGCACCTGCTTGTGCTGAGGGTGGCTCTTACCCTTAAGCACCAGCTCCCGGCCTGTGATTTGAACTGAACAGCCCAACACAAACCGTGCTGCAGAAGCGCCCAAGGCTAT-GGGAAAAAGCCAAAAGACCCTTCCCAACATGCTCTGCAGTCACATTCCCTGCGGGG-CGGAGGGAAAATGCCCAAAAGAAATCCcatccaaatgaaaataaattcaaagagaGTAAGTGGCAGCCTCTCCAGATGGGAAGGAATCCGTGCAAGGATTCTGACGCTGTGAAAAATCTGAATATTGTGGCACCACCAAAGGATCGCACTAGCTCTCTAGCGATGGACGCTGAAAACAACGGAAACTCAGACAGGACAGGTAAAGAATGCGATGGAGACAAAAACATTACAAAGAATCAGTGAAAGaat--gttggttttttaaaagcataaataaaattgagagatGGCTGACTACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46984773 862 + 50890351 tggcaaggcaggcgtttcccacgactcccagccacactgtggcctggggagagacaacagtgtgagtctgaactgagactcacgagccctggagcaggggtgtgagagggaaacagacaatgttcctccctat--gggactggaagcggatgtagctccttcat------------tccccgcagagacctcagggcatttcaccaggcgctgccccagccatgtccatcaggactggtgcctgcactcatcattaggatattattcgtgggcaagccaggggttccagctctgcccagctgtgttccctcaccccagtggaacaggaagctcagggctccagacactccacggtccagtccttcccctgaaacgacagacagcacctcacaggaaacacgccaggtccatatgcacctgcttgtgctgagggtggctcttacccttaagcaccagctcccagcctaccatttgaactgaacagcccaacacaaaccatgctgcagaagcgcccaaggctat-gggaaaaagccaaaagacccttcccaacgtgctctgcagtcacgctccccgcggggccggagggaaaatgcccaaaagaaatcccatccaaatgaaaataaattcaaagagagtaagtggcagcctctccagacgagaaggaatccgtgcagggatcctgacgccgtg-aaaatctgaatattgtggtgccaccaaaggatcgcactagctctctagcgatggacgctgaaaacaacggaaactcagaaaggacaggtaaagaatgagacggagacaaaaacattacaaagaatcagtgaaagaacgtgttggtgtttt-gaagcataaataaaattgagagatggctgactacac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45548238 759 + 49145316 tggc-aggcaggcgtttcccacggctctcagccacacagtggcctggggagagacaacggtgtgtgtctgaacagagactcatgagccctggagcaggggtgtgataggggaacagataatgttcctccccattgaggaatggaaatggatgcaggtccttcctgccccacttctcccccagcagagacctcagggcatttcaccaggagttgccccagccacatccatcagacctggtgcctgcactcatcattagga---tatttgtgggtaagccaggggttccggctctgcccagctgtgtttcctcatccc-acggaacaggaagctcagggctccaggcaccccatagtccagcccttcacctgaaacaacggacagcacctcacaggaagca-gacaggtccacacccacctgcttgtgcagaggctggctcttccccttaagcaccagctcccggcctgcaatttgaaccgcacagcccaacacaaaccctgctgcagaagcgcccaagactat--ggaaaaagtcaaaagacccttcccagcatactctacagtcacactccctgtgggg-ctggggg-aaatgtgcaaagga-accccatcccggtgaaataaaatccaaagagaatgagtggcagcctctccggatgagaaggaatcagtgtgaggattctcatg-tgtgacaaatctgaatgttgtggcaccac---------------------------------------------------------------------------------ATAaaaa---------------------------gttgggcttttgaaagtatacacataattgacagacggctgactacgc i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e nomLeu3.chr10 102827764 0 - 106955855 C e rheMac3.chr19 3733899 79304 - 64156825 T a score=1276233.000000 s hg38.chr19_GL949753v2_alt 262320 803 + 796479 taacc-aa-aaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagagatacaaaagatcatcagagactactatgaacacctttatgcacataaactagaaaacctggag-aaaatagatgaattcctagacacacacaacttcccaagattgcacaggcaaaaaatagaaactctaaacagaccgataacaaccaatgaaaaaggatcagtactaaaaa-tcttccagcaaaaaagtccaggaacagatggattcgcagttgaacttagctgtatgtacgaaggagggctggtaccaatcatactgaaagtattcca-aa-aatcaaggaagtgggattctttgccagctcattttacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctaacagtgtatcaaaaacataattcatcatgatcaagttggcttgattccagggaagaaaggatggttcaatatatgc-aagtcaataaaagtgactcatgacataaact------aagaacaaaaagcatatgatcatctctatagatgcagataaagctttcaagaaagtccaacatcgcttcgtgataaaatccctcaacaggctaggcatgaaagaaacataccgcaaaataccaacaccccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaaacattttccc s panTro4.chr19 59215687 802 + 63644993 taacc-aa-aaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagagatacaaacgatcatcagagactactatgaacacctttatgcacataaactagaaaacctggag-aaaatagatgaattcctagacacacacaacttcccaagattgcacaggcaaaaaatagaaaccctaaacagaccgataacaaccaatgaaaaaggatcagta-taaaaa-tcttccagcaaaaaagtccaggaacagatggattcgcagttgaacttagctgtatgtacgaagaagggctggtaccaatcatactgaaactattcca-aa-aatcaaggaagtgggattctttgctagctcattctacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctagcagtgtatcaaaaacataattcatcatgatcaagttggcttgattctagggaagaaaggatggttcaatatatgc-aagtcaataaaagtgactcatgacataaact------aagaacaaaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcgcttcgtgataaaatccctcaacaggctaggcatgaaagaaacatatcacaaaataccaacaccccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaaacattttccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102827764 802 - 106955855 TAACC-aa-aaaaaggagatttaaataagcacaatcagaaatgataaagttgacattacaaccaacaccacagaaatacaaaagatcatcagagactactatgaacacctttatgcacataaactagagaacctagag-aaaatagatgaattcctagatacatgcaacttcccaagattgcacaggcaaaaaatagaaaccgtaaacagatcaataacaaccaatgaaaaaggatcagtactaaaaagtcttccagcaaaaaagcccaggaacagatggattcacagttgagcttagccatatgtatgaagaagggctggtgccaatcatactgaaagtattcca-aa-aatcaaggaagtgggattctttgctagctcagtctacaaaatcagtatcatcctgatagcaaaatcagacaaggatccaacagaaaaataaaactacaggccaagaaatctgaggaacataggtgcaaaaatcctcaagaaaatactagcaaacagaatctaac--tgtatcaaaaacataattcatcatgatcaagttggcttgattccagggaagaaaggatggttcaatacatgcaaagtcaataaaagtgactcatgacataaact-------agaacaaaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcccttcatgataaaatccctcaacaggctaggcatgaaagaaacataccccaaaataccaacagcccctgcgtgacaaacccacagccaacatcaaattgaatggggagaagtgaaagcattttccc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55186753 804 + 59248254 taatc-ac-aaaaaggaaatttaagtaagtacaatcagaaatgatcaagttgacagtacaactaacaccacagaaatacaaacgatcatcagagactactaggaacagctttatgcacataaactagaaaacctagag--aaatggacgaattcctagacacatatagcttcccaagatctcacaggcaaaaaatagaaaccctaaacagaccaataacgaccaatgaaaaaggatcagtactaaaaagtcttccagcaaaaaggcccaggaacagatggattcacggctgaactttgccatatgtacgaagaagagctggtgccaatcataccgaaagtatttcagaa-aatcaagcttgtggaattctttgctagttcattctacaaaatcagtatcatgtggatagcaaaatcacacaaggatccaacagaaaaataaaactacaggccaagaaacctgaggaacacagatgcaaaaatcctcaagaaaatactagcaaacggaatctaactgtgtatcaaaaacataattcatcatgctcaagttggcttgattccagggatggaaggatggctcaatatatgc-aagtcaataaagatgactcatgaaataaact------aagaacagaaagcatatgatcatctcaatagatgcagataaagcattcaagaaagtccaacatcccttcatgataaaatccctcaacagacgaggcgtgaaagaaacatacctcaaaataataagagccccggcatgacaaacccacagtcaatatcaaattgaatagggagaaatgaaaactttttccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47293866 805 + 51301725 TAACC-aa-aaaaaGGAGATTTAAAtaagtacaatcagaaatgatcAAGTTGACAGTACAActaacaccacagaaatacaaaagatcatcagagactactatgaacagctttatgcacataaactaggaaacctagag--aaatggatgaattcctagacacatatagCTTCCCAAGATCGCACaggcaaaaaatagaaaacctaaacagaccaataacgacCAATGAAAAAGGATCAGTACTAAAAAGTCTTCCAGCAAAAAGGcccaggaacagatggattcacgGTTGAACTTTGCCATATGTACGAAGAAGAGCTGGTGCCAATCATactgaaagtatttcaaaa-aatcaagCTTGTGGAATTCTTTGCTAGTTCATTCTACAAAATCAGTATCATCCGGATAGCAAAATCACACAAGGatccaacagaaaaataaaactacaggccaagAAACCTGaggaacacagatgcaaaaatcctcaagaaaatactagcaaacagaatctaACAGTGTATCAAAAACGTAATTCATCATGCCCAAGTTGGCTTGATTCCAGGGGTGAAAGGATGGCTCAATATATGCAAAGTCAATAAAGATGACTCAGGACATAAACT------AAGAACAGAAagcatatgatcatctcaatagatgcagataaaGCATTCAAGAAAGTCCAACATCCCTTCACGATAAAATCCCTCAACAGACGAGGCAtgaaagaaacatacctcaaaataataagagccccGGCATGACAAACCTACAGTCAATATCAAATTGAATAGTGAGAAATGAAAACCTTTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46985635 806 + 50890351 gaaccaaa-aaaaaggagatttaagtaagtacaatcagaaatgatcaagttgacagtacaaccaacaccacagagatacaaacgatcatcagagactactttgaacagctttatgcacataaactaggaaacctagag--gaatggatgaattcctagacacatatagcttcccaagatcgcacaggcaaaaaatagaaaccctaaacagaccaataacgaccaatgaaaaaggatcggtactaaaaagtcttccagcaaaaaggcccaggaacagatggattcacggttgaactttgccatatgtacgaagaagggctggtgccaatcatactgaaagtatttcaaaa-aatcaagcttgtggaattctttgctagttcattctacaaaatcagtatcatctggatagcaaaatcacacaaggatccaacagaaaaataaaactacaggccaagaaacctgaggaacacagacgcaaaaatcctcaagaaaatacaagccaacggaatctaacagtgtatcaaaaacgtaattcatcatgctcaagttggcttgattccagggatgaaaggatggctcaatatatgcaaagtcaataaagatgactcatgacacaaact------aagaacagaaagcatatgatcatctcaatagatgcagataaagtattcaagaaagtccaacatcccttcacgataaaatccctcaacagacgaggcatgaaagaaacataccccaaaataataagagcaccggcatgacaaacccacaatcaacatcaaattgaatagtgagaaatgaaaaccttttccC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45548997 786 + 49145316 taacc-aataaaaacgagatttaaatgagcacaatcagaaatgagaaagatgacattacagccaacacaacagaaatacaaaagatcatcagagacgaccgcgaacaccttgatgcacatcaaccagaaaacctagaagaaaatggatggattcctagacacatacaacttcccaagattgcacagg-aaaaaatagaaaccctcaacagaccaacaacaagcaatgaaaaagaatcagtactaaaacttcttccagcaaaaaagcccaggaacagatggattcaccgtcaaacttcaccacatgtacgaagaagagctggtagcaatcacactgaagctattcccaaataatcaaggaagtgggattcattcctagctcattctatgaaaccagtattaccctgatagtaaagtcagacaaggactcaacagaagaataaaactacaggccaagaaacctgatgaacacagatgcaaagatcgtcaa-aaaatactagcaaacagaatctaacagtgcatcaaaaacataattcatcatgatcaagttgtcttcctccca-ggatgaaaggagggttcaatacatgg-aagtcaacaaaggggactcatggcacaaacttgaacttagaacacaaagcctataatcatgtgaataggtgaagataaattattcactaaagtccaac----------------atccctcaacaaactaggcat----gaaacatacctcaaaataagag----ccctacatga-aaacccagaggcaacatcaaagtgaatggggagaattgaaaatattttccc i calJac3.chr22 C 0 I 306 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 3733899 79304 - 64156825 T a score=48034.000000 s hg38.chr19_GL949753v2_alt 263123 32 + 796479 aggaaaatgAGAATGGGATCCTCCCTAG-CCCC s panTro4.chr19 59216489 32 + 63644993 aggaaaatgAGAATGGTATCCTCCCTAG-CCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828566 32 - 106955855 aggaaaatgggaATGGGATCCTCCCTAG-CCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55187557 33 + 59248254 aggaaaatgggaATGGGATCCTCCGTAATTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47294671 33 + 51301725 AGGAAAACGGGAATGGGATCCTCCATAATTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986441 33 + 50890351 AGGAAGATGGGAATGGGATCCTCCGTAATTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550089 32 + 49145316 aagaaaaTGGGAATGGAATCCTCCCTAG-CCCC i calJac3.chr22 I 306 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 19707743 10192 - 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 3733899 79304 - 64156825 T a score=220336.000000 s hg38.chr19_GL949753v2_alt 263155 121 + 796479 TGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGGGTCCCTCTCATGCTAGAATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGGCCATGGGAGTGACAGTCATGG s panTro4.chr19 59216521 121 + 63644993 TGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGCGTCCCTCTCATGCTAGAATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGACCATGGGAGTGACAGTCATGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828598 121 - 106955855 TGGGGTCTCCTACTGGACCAGGGCCTATCTGTGGGGCAGGGTCCCTCTCGTTCTATCATCTCCCGTTCCCCTCGTCAAATCTCAGTGAAGTGGACCATGGCCATGGGCGTGACAGTCATGG i nomLeu3.chr10 C 0 I 115 s macFas5.chr19 55187590 114 + 59248254 TGGGGTCTCCTACT-------GGCCTACCTGTGGGGCAAGGTCCCTCTCATACTGGAATCTCCCATTCCCCTCGTCAAATCTCAGTGAAGTGAACCATGGCCATGGGCGTGAGAGTCATGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47294704 121 + 51301725 TGGGGTCTCCTACCGGACCAGGGCCTACCTGTGGGGCAAGGTCCCTCTCATGCTAGAACCTCCCATTCCCCTTGTCAAATCTCAATGAAGTGAACCATGGCCTTGGGCATGAGAGTCATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986474 121 + 50890351 TGGGGTCTCCTACTGGACCAGGGCCTACCTGTGGGGCAGGGTCCCCCTCATACTGGAATCTCCCATTCCCCTCGTCAAATCTCAGTGAAGTGAACCATGGCTGTGGGCATGAGAGTCATGG i chlSab2.chr6 C 0 I 96 s calJac3.chr22 45550121 114 + 49145316 TGGGGTCTCCTACTGCACCAGGGCCTACCTGCAGGGCAGAGTCCCCCTCATGTTAGAA-------TTCCCCTCGTCAGATCTCAGTGAAGTGGGCCATGGACATGGGTGTGAGAGTCATGG i calJac3.chr22 C 0 I 185 s canFam3.chr1 102772729 118 + 122678785 TGCAATATCTGAC-AGACCAGGGCCTGGCTGTGGGGTTG-GTCCCTCCCAGACTAGGGTGTCCC-TTCCTCTCCTCAGATCTCACCTAGACAGAGCAAGGCCATGAGGGTGGGGGTCTTGG i canFam3.chr1 I 293 C 0 e mm10.chr7 3845320 58957 + 145441459 T e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 3733899 79304 - 64156825 T a score=1000.000000 s hg38.chr19_GL949753v2_alt 263276 1 + 796479 C s panTro4.chr19 59216642 1 + 63644993 C i panTro4.chr19 C 0 I 78 s macFas5.chr19 55187704 1 + 59248254 C i macFas5.chr19 C 0 I 94 s papAnu2.chr19 47294825 1 + 51301725 C i papAnu2.chr19 C 0 I 94 s canFam3.chr1 102772847 1 + 122678785 C i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45550235 185 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=273.000000 s hg38.chr19_GL949753v2_alt 263277 1 + 796479 A s panTro4.chr19 59216721 1 + 63644993 A i panTro4.chr19 I 78 C 0 s canFam3.chr1 102772848 1 + 122678785 A i canFam3.chr1 C 0 I 2946 e mm10.chr7 3845320 58957 + 145441459 T e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45550235 185 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e papAnu2.chr19 47294826 94 + 51301725 I e macFas5.chr19 55187705 94 + 59248254 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=46345.000000 s hg38.chr19_GL949753v2_alt 263278 508 + 796479 CAGAGAGGCAGGGCTCTCCtgtagcaggacgagccgcagacaaaactcctcagacaccggattaaagaaggaagaggtttttattcagctgggagcgtgggcagactcgcgtcttaagagccgaactccccgaaaaagaaattcttggcctttttaaaggcttataactttaaggggtccacgtgaaagggtcgtgatacatcaagcaagcgtgggaaacgtgactgtgggggctatatgcatcagctaacagaacaaaaagttttacagtgcttttttcatgcagtgtctggaatttacagataacaccagtagtttaggtcaggggttgatgttattattattactttttttaactcctacggccgggtggtggtgccaaggttgtctggctatttatcttacttttgtatttttccaacttttggctttttctctcttcctgttttgtgaactaggcaaggtggggggaggagggcagcaggagtagtagtggtctccttcctta s panTro4.chr19 59216722 506 + 63644993 CAGAGAGGCAGGGCTGTCCtgtagcaggacgagccgcagacaaaactcctcagacaccggattaaagaaggaagaggtttttattcagctgggagcgtgggcagactcgcgtcttaagagccgaactccctgagaaagaaattcttggcctttttaaaggcttataactttaaggggtccgcgtgaaagggtcgtgatacatcaagcaagcgtgggaaacgtgactg--ggggctacatgcatcagctaacagaacagaaagttttacagtgcttttttcatgcagtgtctggaatttacagataacaccagtagtttaggtcagaggttgatgttattattattactttttttaactcctacggccgggtggtggtgccaaggttgtctggctatttatcttacttttgtatttttccaactttttgctttttctctcttcctgttttgtgaactaggcaaggtggggggaggagggcagcaggaatagtagtggtctccttcctta i panTro4.chr19 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45550235 185 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e chlSab2.chr6 46986595 96 + 50890351 I e papAnu2.chr19 47294826 94 + 51301725 I e macFas5.chr19 55187705 94 + 59248254 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=39211.000000 s hg38.chr19_GL949753v2_alt 263786 43 + 796479 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCATGGGTGGT s panTro4.chr19 59217228 43 + 63644993 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCATGGGTGGT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55187799 43 + 59248254 CTCCCACTTACTGGATTTTCCCACCAGCATCTCCACGGGTGGT i macFas5.chr19 I 94 C 0 s papAnu2.chr19 47294920 43 + 51301725 CTCCCACTTACTGGATTTTCCCACCAGCATCTCCACGGGTGGT i papAnu2.chr19 I 94 C 0 s chlSab2.chr6 46986691 43 + 50890351 CTCCCACTTACAGGATTTTCCCACCAGCATCTCCACGGGTGGT i chlSab2.chr6 I 96 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45550235 185 + 49145316 I e nomLeu3.chr10 102828719 115 - 106955855 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=162014.000000 s hg38.chr19_GL949753v2_alt 263829 151 + 796479 GAGCTGTCCCGGACCCCG--------CTGGCTCATGTTTTCCCAGGACttggcctttctcgaatgctttatctgcatcggttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcacctttattgacttgcatatattgaaccatcctt s panTro4.chr19 59217271 150 + 63644993 GAGCTGTCCTGGACCCCG--------CTGGCTCATGTTTTCCTAGGACTTG-CCtttctcgaatgctttatctgcatcggttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcatctttattgacttgcatatattgaaccatcctt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828834 151 - 106955855 GAACTGTCCCGGACCCCG--------CTGGCTCATGTTTTCCCAGGGCttggcctttcttgaatgctttatctgcatctgttgagatgatcacatgctttttgttcttagtttatgtcgtgagtcacctttattgacttgcatatattgaaccatcctt i nomLeu3.chr10 I 115 C 0 s macFas5.chr19 55187842 145 + 59248254 GAACTGTCCCGGACCCCACCACGAGCCTGGCTCTTGTTTTCCCAGGGCttggactttcttgaaggctttatctgcctctattgagatgatcatatggtttctgttcttagtttatgtcgtgagtca--------------cgtatattgaACCATCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47294963 145 + 51301725 GAACTGTCCCGGACCCCGCCACGAGCCCGGCTCTTGTTTTCCCAGGGCTTGGACTTTCTTGAAGGCTTtatctgcctctattgagatgatcatatggttttcgTTCTTAGTTTATGTCGTGAGTCA--------------CGTATCTTGAACCATCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986734 145 + 50890351 GAACTGTCCCGGACCCCACCACGAGCCTGGCTCTTGTTTTCCCAGGGCttggactttcttgaaggctttatctgcctctattgagatgatcgtatggtttttgttcttagtttatgtcgtgagtca--------------cgtatattgaACCATCCTT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e calJac3.chr22 45550235 185 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=1498648.000000 s hg38.chr19_GL949753v2_alt 263980 904 + 796479 TGAGACAGGCACCAGGCTTTCTGCTGATATTTCAGACACGCATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGACATGTCCTCGTCTCATTGAGGGCCGGGACGTAGCTGCAAATGGACGTGGTGCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCTCAGAGACTCCTCATGGGGTTTCACTCTCTCCTTCAGCTCACCCATAAACACACCCTTGTGGGGAACCTACCATGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCGGGGCAGACTCACATCAGCAGAGACTCATCTCACATCTTGCTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGATGAACAGAAAGGGGAAATACAGGGAGACAAGGGAAGGAATCATGTCTCTTTTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCATCGCAACAG-CGTCCG--CCCCCGTCTCCCTGGAAACAACATTGACCTGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAAACACTCCTGTTCCCATCCTGTGCTCCTGAGTTCAAGGTTCTGGGACAATACGTGGGGTTagcactctgctttgagggaaaatcttgtctttatttaaatattcatgtgtcaccccctgcctgtgtgaccttgggcagtaacctcccatttctgagcctcggtttcctcatttgGAGCCTGTGATGAACCCCATTTATCACAGGGGAGCTGGGTCATTGGAGCCTGGGGACTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGTGGGGGCATGAGGGGATGCTGGCGCCCACCATCAAG s panTro4.chr19 59217421 904 + 63644993 TGAGACAGGCACCAGGCTTTCTGCTGATATTTCAGACACACATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGACATGTCGTCGTCTCATTGAGGGTCGGGACGTAGCTGCAAATGGACGTGGTGACTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAACAGAGGGTTCTTCCTTCCTCTCAGAGCCTCCTCATGGGGTCTCACTCTCTCCTTCAGGTCATGCATAAACACACCCTTTTGGGGAACCTACCATGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACTCACATCAGCAGAGACTCATCTCTCATCTTGTTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGATGAACAGAAAGGGGAAATAGACGGAGACAAGGGAAGGAATCATGACTCTTTTCCCAAAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCATCGCAACAG-CATCCG--CCCCCGTCTCCCTGGAAACAACATTGACCCGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAAACACTCCTGTTCCCATCCTGTGCTCCTGAGTTCAAGGTTCTGGGACAATACGTGGGGTTAGCACTCTGCTTTGAGGGGAAATCTTGTCTTTATTTAAATATTCATGtgtcaccccctgcctgtgtgaccttgggcagtaacctcccatttctgagcctcggtttcctcatttgGAGCCTGTCATGAACCCCATTTATCACAGGGGAGCTGGGTCATTGGAGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGTGGGGGCATGAGGGGATGCTGGCGCCCACCATCAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102828985 903 - 106955855 TGAGACAGGCACCAGGCTTTCTGCTG-TATTTCAGACACACATGGCATCTCTCCTGATCTCCTTTCACTGTCTGCCTGGCCTGTCGTCATCTCATTAAGGGCCGGGACATGGCTGCAAAAGGACGTGATGCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCGACGGAGGGTTCTTCCTTCCTCTCAGAGCCTCCTCATGGGGTCTCACTCTCTCCTTCAGCTCACCCACAAACACACCCTTGTCGGGAACCTACCACGGCCAGTCTTCTCATCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACTCACATCAGCAGAGACTCATCTCACATCTGGCTGTGCAGTTCCAGTTGAGCTTTATTGTGGCGGTGAACAGAAAGGGGAAATATACAGACACAAGGGAAGGAATCATGACCCTTTTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAACGTTCCCTTCACGAACTTCTCATTCACTCGTCACAACGG-CATCCA--CCCCCATCTCCCTGGAAACAAAATTGACCTGACTCTGCCTTCTTGGTG-CCCCCGTCTTCTTTCAGGCACTCCTGTTCCCATCCTGCGCTCCTGCGTTCAAGGTTTTGGGACAATACGTGGGGTTAGCACTCTGATTTGTAGGGAAATCTCATCTTTATTTAAATATTCATGtgtcaccgcctgcctgtgtgaccttgggcagtaacctctcatctctgagcctaagtttcctcatttgGAGCCTGTCATGAGCCCCATTTATCACAGGGGAGCTGGGTCATTGGAGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGGGGAGGGGACATGAGGGGATGCTGGCGCCCACCATCAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55187987 901 + 59248254 TGAGACAGGCACCGGGCTTTCTGCTAATATTTCAGCCACACAAGGCATCTCTCCTGATCTCCTTTCGCTGTCTGCCCGACCGGTCCTCATCTCATTGAGGGCCAGGATGTAGCTGCAAATGGACATGGTGCCTTCCTGAGTTGGTCCCTTCGAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCTCAGAGCCTCTCCGTGGGGTCCCACTCTCTCCTTCAGGTCACCCGTAAACACACCCTTGTGGGGAACTTACCGCGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACTCAGATCAGCAGAGACTCCTCTCACGTCTGGCTGTGCAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACACAAGGGAAGGAATCGTGACCCTTTTCCCAGAACTGGAGTGTGGGTTTTCTCTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCGCAACGGTCATCCG--CCCCCGTCTCCCTGGA---AACATTGGCCTGACTCTGCCTTCTTGGTG-CCCCCCCTTTCTTTCAAACACTCCTGTTCCCATCCTGCGCTCCTGCGTTCAAGGTTGTGGGACAATACATAGGGTTAGCACTCTGATTTGAGGGGATATCTCGTCTTTATTTAATTATTCGTGTGTtaccccttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttggagcctgtcatgaactccattcctcacagggtggctgGGTCATTGGTGCCTGGGGGCTGCAGGGGGCTCAGCCATGGGTAATTTCCAGAG-AGGTGAAGACAGGAGAGGTGGGGGCGTGAGGGGATGCTGGCGCCCACCATCAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295108 908 + 51301725 TGAGACAGGCACCGGGCTTTCTGCTGATATTTCAGACACACAAGGCATCTCTCCTGATCTCCTTTCGCTGTCTGCCCGACCGGTCCTCATCTCACTGAGGGCCAGGATGTAGCTGCAAATGGACGTGGTGCCTTCCTGAGTTGGTCCCTTCGAGGTGAAGGCAACAGAGGGTTCTTCCTTCCTCTCAGAGCCTCTCCGTGGGGTCCCGCTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTCTCACCAGTGCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACTCAGATCAGCAGAGACTCCTCTCACGTCTGGCTGTGCAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACGCAAGGGAAAGAATCGTGACCCTTTTCCCAGAACTGGAGTGTGAGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCGCAACGGTCACCCAcccccccGTCTCCCTGGAAACAACATTGACCTGACTCTGCCTTCTTGGTGccccccccTTTCTTTCAAACACTCCTGTTCCCATCCTGCGCTCCTGCGTTCAAGGTTGTGGGACAATACATAGGGTTAGCACTCTGATTTGAGGGGAAATCTcgtctttatttaaatattcatgtgTTACCCCttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttggagCCTGTCATGAACTCCATTCCTCACAGGGGAGCTGGGTCATTGGTGCCTGGGAGCTGCACGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGAGGTGGGGGCGTGAGGGGATGCTGGCGCCCACCATCAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46986879 902 + 50890351 TGAGACAGGCGCCAGGCTTTCTGCTGATATTTCAGACACACAAGGCATCTCTCCTGA---CCATTCGCTGTCTGCCCGACTGGTCCTCATCTCACTGAGGGCCAGGATGTAGCTGCAAATGGACATGGTGCCTTCCTGGGTTGGTCCCTTCGAGGTGAAGGCAACGGAGGGTTCTTCCTTCCTCTCAGAGCCTCTCCGTGGGGTGCCACTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTCTCACCAGTCCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACGCAGATCAGCAGAGACTCCTCTCACGTCTGGCTGTGCAGTTCCAGTTGGGTTTCACTGTGGCAATGAGCAGAAAGCAGAAATACAGGGACACAAGGGAAGGAATCGTGACCCTTTTCCCAGAACTGGAGTGTGGGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATCGAAACGGTCATCCA--CCCCCGTGTCCCTGGAAACAACATTGGCCTGACTCTGCCTTCTTGGTG-CCCCCCATTTCTTTCAAACACTCCTGTTCCCATCCTGCGCTCCTGCGTTCAAGGTTTTggggcaatatgtagggttagcactctgatttgaggggaaatctcgtctttatttaattattcatgtgttaccccttgcctgtgtgaccttgggcagtaacttcccatctctgagcctcagtttcctcatttgGAGCCTGTCATGAACTCCATTCCTCACAGTGGGGCTAGGTCATTGGTGCCTGGGGGCTGCACGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGAGGTGGGGCCGTGAGGGGATGCTGGCGCCCACCATCAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550420 894 + 49145316 TGAGACAGGCACCAGGTTTTCTGCTGATATTTCAGACAAACATGGGATCTC-CCTGATCTCCTTTCACTGTCTGCCGGACCTGTCCTCATCTCATTTATGGCCAGTAGGTAGCTGCAAATGGATGTGGTTCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAATGGAGGACTCTTCCTTCCTCTCAGCACCTTCCCGTGGGGTCTCACTTTCTCCTTCAGCTCATCCATAAGCATATCCTTGTGGGGTTCCTGCCACAGCCAGTCCTCTCAGCAGCCCTGGGGGGGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGACTCAGATCAGCAGAGACTCACCTCACATCTGTCTGTGCAGTTTCCTTTGTGCTTCATTGCTGCAATGAGCA-AAAGAGGAAATATAGGGAAATA--GGGAAGAATCACGACTCTTTTCCCAGAACTGGAATGTGGGTTTTCTTTATGCAAAAATGTTCCCTTCACGAACTTCTC-CTTAGTCGTCACCACAG-CCTCCA--CCTCCATCTCCCTGGA---AACGTTGACCTGATTCTGCCTTCTTGGTG-CCCCCGTTTACTTTCAAACACTCCTATTCTCATGTTTTGCTCCTGTGTTC-TGGTTTTGGGACAATACATGGGTTTAGCACTCTGATTTGAAGGGAAATCTCATCTTCATTTAAATATTCATGTAAcacctcctgcccgtgtgacctt-ggctgtgacctcccatttctgagcctgagtttcctcatttgAAGCCTGTCATGAACTCCATTCATCACAGCGGAGCTGGGTCATTGGAGTCTGGGAGCTGCACGGGGCTCAGCCACGGGTGATTTCCAGAGCAGGTGAAGACATGAGGGGCGGGGACATGAAGGGATGCTGGTGTGCATGCTCAAG i calJac3.chr22 I 185 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e ponAbe2.chr19 56041213 3000 + 60714840 M e rheMac3.chr19 3733899 79304 - 64156825 T a score=359230.000000 s hg38.chr19_GL949753v2_alt 264884 180 + 796479 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGGTTATCACAGTCATGTCCAGAAAATGAGAAATGAAAGCTTGTCAGAAGGAGAAGCGCCTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTG s panTro4.chr19 59218325 180 + 63644993 GCCTGAGATTGATGTTTCCACTAAGGAGAGCACCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGGTTATCACACTCATGTCCAGAAAATGAGAAATGAAAGCTTGTCAGAAGGAGAAGCGCCTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044296 179 + 60714840 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGA-ACTTCTCGTAATATTTCATCAGCACCCCGGTTATCACAGACATGTCCAGAAAATGGGAAATGAAAGCGTGTCAGAAGGAAAAGCACGTGCATTAAAGAGAAAATTAAAACTGACAGAGCATTTG i ponAbe2.chr19 M 3000 C 0 s nomLeu3.chr10 102829888 177 - 106955855 GCCTGAGATTGATGTTTCCACTAAGGAGAGCCCCTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCTTCAGCACCCCAGTTATCACAGTCATGTGCAGAAAATGGGAAATGAGAGCTTGTCAGAAG---AAGCACCTGCATTAAAGAGAAAATTAAAACCGACAGAGCATTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55188888 179 + 59248254 GCCTGTGATTGAGGTTTGCACTCAGGAGTGCCCGTTTGTTCCTGCCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCAATTATCACAGTCATGTGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAG-ACCTACGTTAAAGAGAAAATTAAAACTGACAGAGCATTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296016 180 + 51301725 GCCTGTGATTGAGGTTTGCACTCAGGAGTACCCGTTTGTTCCTGTCCTTGAGAGATGCTTCTCATAATATTTCATCAACACCCCGATTATCACAGTCATGTGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAGCACCtacattaaagagaaaattaaaactgacagAGCATTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987781 179 + 50890351 GCCTGTGATTGAGGTTTGCACCCAGGAGTGCCCGTTTGTTCCTGCCCTTGATAGATGCTTCTCACAATGTTTCATCAACACCCCGGTTATCACAGTCAT-TGCAGAAAATGGGAAATGAAAGCTGGTCAGAAGGAGAAGCACCTACGTTAAAGAGAAAATTAAAACTGACAGAGCATTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45551314 157 + 49145316 GCCTGTGACTGATGTTTCCACTCAGGATCCCCTCTTCGTTCCTACCCTTGAGAGATGTTTCTTACCATATTTCATCAACACCCCAGTTGTCATGGTCATGTGCAGAAAATAGGAAATGAAAGCTCTTCAGAAG---AAGCAT-----------------TTGAAA---ACAGAGCATTTG i calJac3.chr22 C 0 I 3546 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=639052.000000 s hg38.chr19_GL949753v2_alt 265064 379 + 796479 TGTCTGGTGCCATT-GGGGTCTTCAGGGAGGAAGTAATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAAtctttttttttttttttt------cgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccacctcccgggttcaaacgattctcctgtctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttttagtaaagatggggcttcaccatgttggccaggctggtctcaaactcctgccctcacctgatccgcctgcctccgcctcccaaagtgctgggattacaggggtgggccaccgcgcctggccA s panTro4.chr19 59218505 385 + 63644993 TGTCTGGTGCCATT-GGGGTCATCAGGGAGGAAGTAATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAAtctttttttttttttttttttttccgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctcagctcaccgcaacctccccctcccgggttcaaatgattctcctgcctcagcctcccgagtagctggcactacaagcatgcaccaccacacccagctaatttttgtatttttagtaaagatggggcttcaccatgttggccaggctggtctcaaactcctgacctcacctgatctgcctgcctccgcctcccaaagtgctgggattacaggggtgggccaccgcgcctggccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044475 372 + 60714840 TGTCTGGTACCATTAGGGGTCATCAGGGACGAAGCAATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAAtctttttttt--------------tgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccgcctcccgggttcaaatgattctcctgcctcagcctcccgagtagctggcgctacaagcacgcaccaccacacccagctaatttttgcgtttttagtagagacggggtttcaccatgttggtcaagctggtctcaaactcctgacctcacatgagccgcctgcctcggcctcccaaagtgctgggattacgggggtgggccaccgcgcctggccA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830065 379 - 106955855 TGTCTGGTGCCATTAGGGGTCATCAGGGAGGAAGTAATTAAGTCACTAGTGTGCATACATTTAAGCATGAAATGCAAATCttttttttttttttt-------tgagacagagtctcactctgtcgcccaggctggagtgcagtggcacaatctcagctcaccgcaacctccgcttcccgggttcaaatgattcccctgcctcagcctcctgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttttagtaaagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcacatgatccgcctgcctcagcctcccaaagtgctgggattacaggggtgggccaccctgcctggccA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189067 368 + 59248254 TGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGCAATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATCAtttc-----------------tgagatggagtctcattctgtcccccaggctggagtgcagtggcgcagtcttggctgatcgcaacctgcgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagcacgcaccaccacacctggctaatttttgta-ttatagtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296196 369 + 51301725 TGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGCAATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATcatttc-----------------tgagacggagtctcactctgtcccccaggctggagtgcagtggcgcaatctcggctgatcgcaacctgcgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttgtagtagagacggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcttcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46987960 369 + 50890351 TGTCTGGTGCCATTAGGGGTCATTAGGGAGGAAGCAATTAAGTCACCAGGGTGCATGCATTTAAGCATGAAATGCAAATCAtttc-----------------tgagacggagtctcactctgtcccccaggctggagtgcagtggcgcaatctcggctgatcgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctggcactacaagcacgcaccaccacacccggctaatttttgtatttgtagtagagacggggtttcgccacgttggccaggctggtcttgaactcctgacctcaggtgatccacctgcttcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45551471 3546 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=143123.000000 s hg38.chr19_GL949753v2_alt 265443 59 + 796479 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA s panTro4.chr19 59218890 59 + 63644993 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044847 59 + 60714840 AAATGCAAATCTTGACCTCTCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830444 59 - 106955855 AAATGCAAATCTTGACCTATCATGATAAACTGAAAAATAGGAGTAAATTAAAAAATACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189435 59 + 59248254 AAATGCAAATCTTGACCTATCATGAGAAACTGAAAAATAGGAGTAAATTAAAAAATATA i macFas5.chr19 C 0 T 30396 s papAnu2.chr19 47296565 59 + 51301725 aaatgcaAATCTTGACCTATCATGAGAAACTGAAAAATAggagtaaattaaaaaataca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46988329 59 + 50890351 AAATGCAAATCTTGACCTATCATGAGAAACTGAAAAATAGGAGTAAATTAAAAAATACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45555017 59 + 49145316 AAATGCAAATCTTGACCTACCATGATAAACTGAAAAATAGGAGGAAATTAACAAATACA i calJac3.chr22 I 3546 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=282181.000000 s hg38.chr19_GL949753v2_alt 265502 372 + 796479 TATGCTAGACTGAATTATGTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCGATAGTAAAAAGATAAGGGAAGGAGATGCTAAGAGAGTACTCTCAGGGGACTAACTGCAAGTGAGGAATTCTATACTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAACAGAAGAAGGCTCAGGGCAAGACGGACCTGTGAAG-CTG-TCTGGTTGGGCTTCCCCTTCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCTCTCAAATCATCAGATGTGCTTTCTCTTCCAGGTGTTATA-CTTACCCTTT s panTro4.chr19 59218949 371 + 63644993 TATCCTAGACTGAATTATGTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCAATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTATTCTCAGGGGACTAACTGCAAGTGAGGAATTCTATACTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAGTTCCTAAACAGAAGAAGGCTCAGGGCAAGACGGACCCGTGAAG-CTG-TCTGGTGGGGCTTCCCCTTCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCTCTCAAATCATCAGAGGTGCTTTCTCTTCCAGGTGTTATA-CTTACCCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56044906 371 + 60714840 TATGCTAGACTGAATTATATAATTTAAAATGCATTTTTGTGTTTCGTGATTTTCAACTCAACATATCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCCGATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTACTCTCAAGGGACCAACTGCAAGTAAGGGATTCTGTGCTTACTCAGGTTAATACCTTAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAGCAGAAGAAGGCTCAGGGCAAGACGGACCCGTGAAG-CCA-TCTGGTTGGGCTTCCTCTGCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCCCTCAAATCATCAGATGTGCTTTCTCTTCCAGGTGTTACA-CTTACCCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830503 372 - 106955855 TATGCTAGACTGAATTAAATAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAACATGTCAATAGCATTGCTTCTCAGTGGGACTGGACTTCCTGATAGTAAAAAGA-AAGGGCAGGAGATGCTAAAAGAGTACTCTCAAGGGATTAACTGCAAGTGAGGAATTCTATGCTTACTCAGGTTAATACCTGAAAGGTAAAGGGGTCAGCAGGGGACCAATTCCTAAGCAGAAGAAGGCTGAGGGCAAGACGGACCTGTGAAGCCCC-TCAGGTTGGGCGTCCCCTGCGTGAGGGCTGAGGAGGGATTGGAGGGTGGATGCCTC-AATCATCAGATGTACTttctctcccaggtgttatatcttacccttt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45555076 369 + 49145316 TATGCTAGACTGAATTATCTAATTTAAAATGCATTTTTGTGTTTTGTGATTTTCAACTCAATATGTCAAAAGAATTGCTTCTCATTGGGATGGGAC-TCCCAACAGAAAAAACA-AAGGCCAGGAGATGTTGAAGAAGTATCTTCAAGGAATGAATTGAAAGTGAGGAGTTGGATGTTCAGCCAAGTTAATATCTGAAAGGTAAAAGGGTTAGCAGGGGACCAATTCCTAAGCAGAAGCA-GCTCAGGGTAAGATGGACCTGTGAAG-CTGATCAGGTCAGGCTTCCCCTGTGTGAGGGCTGAGGAGGGATTGGAGGGTGGATCACTC-AATCATCAGATGTGCTTTTTCTT-CAGGTGTTCTATCCTATCTTTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 0 + 51301725 C e macFas5.chr19 55189494 30396 + 59248254 T e rheMac3.chr19 3733899 79304 - 64156825 T a score=151826.000000 s hg38.chr19_GL949753v2_alt 265874 142 + 796479 AACTAATACAGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAAGTTACTAGATATTACTGTTTTCATGCTCAGTGAAGGCAATTTTAAATGATATCATCCAGTTGGAAGA s panTro4.chr19 59219320 142 + 63644993 AACTAATACAGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAAGTTACTAGATATTACTGTTTTCATGCTCAGTGAAAGCAATTTTAAATGATATCATCCAGTTGGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045277 142 + 60714840 AACTAATATAGAAATGTTTTCATCTATTTTGATAGAGAGAGTGGGAGGAAAAAGAAGGCATTTTCTGAGCTGCAGGTTACTAGATATTACTGTTTTCATGCTCAGTGAAAGCAATTTTAAATGATGTCATCCAGTTGGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102830875 139 - 106955855 aactaatatagaaatgttttcatctattttgatagagaaagtgggaggaaaaagaagGCATTTTCTGAGCTGCAAGTTACTAGATATTATTGTTTTCATGCTCAGCGAAAGCAATTTCAAATG---TCATCCAGTTGGAAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55159098 140 + 59248254 aataaataaaTAAAAAATTTCACAAATCTTGATAGAG--AGTGAAAGGGAAAGGAAGGTATTTCCAGAGCTACATTTAAAATTTTTTTACTGTTTTCACACTCAGTGAAAGCAATTCTAAATGATGAAACTTAGTTGGAAGA i macFas5.chr19 T 30396 C 0 s calJac3.chr22 45555445 142 + 49145316 AATTAATATAGAAATGTTTTCATCTACTTTGATAGAGAGAGTGTGAGGAAGAAGAAGGCATTTTCTGAGCTGCAAGTTACTAGATATTACTGTTTTTATGCTCAGTGAAAGCGATTTTAAATGATGTAATCCAGTTAGAAGA i calJac3.chr22 C 0 I 1 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 0 + 51301725 C e rheMac3.chr19 3733899 79304 - 64156825 T a score=2820.000000 s hg38.chr19_GL949753v2_alt 266016 3 + 796479 TCA s panTro4.chr19 59219462 3 + 63644993 TCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045419 3 + 60714840 TCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831014 3 - 106955855 TCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55159238 3 + 59248254 TCA i macFas5.chr19 C 0 I 30253 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45555587 1 + 49145316 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 0 + 51301725 C e rheMac3.chr19 3733899 79304 - 64156825 T a score=2907.000000 s hg38.chr19_GL949753v2_alt 266019 8 + 796479 ATGAATCC s panTro4.chr19 59219465 8 + 63644993 ATGAATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045422 8 + 60714840 ACGCATCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831017 8 - 106955855 ATGAATCC i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45555587 1 + 49145316 I e chlSab2.chr6 46988388 0 + 50890351 C e papAnu2.chr19 47296624 0 + 51301725 C e macFas5.chr19 55159241 30253 + 59248254 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=494277.000000 s hg38.chr19_GL949753v2_alt 266027 310 + 796479 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctactaaaaatacaaaaaaattagctgggcgtggtggtgggcgcctatagtcccagctactcgggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagcgcagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaaaaa------agaaTCAATG s panTro4.chr19 59219473 308 + 63644993 ggccaggctcggtggctcacgcctgtaatcccagcactttgggaggccgaggagggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctactaaaaatacaaaaaaaatagctgggcgtggtggcgggcgcctatagtcccagctactcgggaggctgaggcaggagaatgttgtgaacctgggaggcggagcttgcagtgagcgcagattgtgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaagaaa--------gaaTCAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045430 314 + 60714840 ggccgggcccagtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcac-----aaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatac-aaaaaattagccgggcatggtggcaggtgcctgtagtcccagctactcgggaggccgaggcaagagaacggcgtgaacctgggaggcggagcttgcagtgagcccagattgtaccactgcactccagcctgggcgacagagtgaaactccatctcaaaaaaaaaaaagaaaaaaaaagaagaTCAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831025 308 - 106955855 Agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcac-----gaggtcaggagatcgagaccatcctggctaacacagtgaaa-ctccgtctctactaaaaatacaaaaagattagccgggcgtggtggcgggcgcctgtagtctcagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagcccagattgtgccactgcactccagcctgggcgacagagcgagacttcgtctcaaaaaaagaaaaaaaa-------aaGATCAATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189494 307 + 59248254 ggccgggctcagtggctcacgcctgtaatcctagcactttgggaggccaaggcaggtggatcacaaggtaaggtcaggagatggagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatag-aaaaaattagctgggcgtggtggcgggcgcctatagtcccagctactc-ggaggctgaggcaggagaacggtgtgaacccgggaggaggagcttgcagtgagccgagatcgcgccgct-cactccagcctgggcgacagagcgagactccgtctc----aaaaaaaaaaaaa------aaGGTCAATG i macFas5.chr19 I 30253 C 0 s papAnu2.chr19 47296624 307 + 51301725 ggccgggctcggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcac-----aaggttaggagatggagaccatcctggctaacacggtgaaa-ctccgtctctactaaaaatag-aaaaaattagccgggcgtggtggt-ggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgggaatccgggaggcggaacttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaa------aagatcaatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46988388 297 + 50890351 ggccgggctcagtagctcacgcctgcaatcccagcactttgggaggccaaggcaggtggatcac-----aaggtcaggagatggagaccatcctggctaacacggtgaaa-ccgcgtctctactaaaaatag-aaaaaatg----gggcgtagtggt-ggtgcctgtagtcccagctacttgggaagctgaggcaggagaatggcgtgaacccgggaggaggagcttgcagtgagccgagatggcgccactgccctccagcctgggcgacagagtgagactccgtctc------aaaaaaaaaaa------aaGATCAATG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45555587 1 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=1372480.000000 s hg38.chr19_GL949753v2_alt 266337 657 + 796479 AATCCAAAATGTAGAATATGAGATGCCACAGTGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACAGA--CATGCCCACATGAATGCAACCACACACGGGCACACATGTATGAGTCAGTGTGCATGTACACATGTGAGTACTCAGAGTTCAGCTACAGTGGAATTAGAACGTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAGTGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTCT---TTTTTTTTAATCCTGTATGTAAAAGAGTAATTCATCCACTGAAGGATAAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATGAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATACTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACATAATCCAAAAAGTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCaggctgagcggggaggatcacttgagcccaggagttcaagaccagccagggcaa-atagtgagactcatctttaTTT--ATTTTTTTAAAAAAAGAAGG--TATTAAAGATG s panTro4.chr19 59219781 657 + 63644993 AATCCAAAACGTAGAATATGAGATGCCACAGCGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACAGA--CATGCACACATGAATGCAACCACACACGGGCACACATGTATGAGTCAGTGTGCATGTACACATATGAGTACTCAGAGTTCAGCTACAGTGGAATTAGAACGTGTCTTCTCTAAAGGCAAGGACAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTCG---TTTTTTTTAATCCTGTATGTAAAACAGTAATTCACCCACTGAAGGATAAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCACAAAACACAATAGTACCATCTAAAATGAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACATAATCCAAAAAGTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCaggctgagcggggaggatcacttgagcccaggagttcaagaccagccagggcaa-atagtgagactcatctttaTTT--ATTTTTTTTAAAAAAGAAGG--TATTAAAGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56045744 665 + 60714840 AATCCAAAGCGTAGAATATGAGATGCCACAGCGATG-TAAGTGAGAAACAGGCAAGTAATTGAAAAT----------------cacacacacacgcatccacacacgaatgcaaccacacacgggcacacacGTATGAGTCAGTGTGCATGTACACATACGAGTACTCAGAGTTCAGCTACAGTGGAGTTAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAATTTTTTGGTTTTTTTTTTTACCCTGTATGTAAAAGAGTCATTCACCCACTGAAGGATGAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATAAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCTAGTAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACACAATACAAAAACTTTTAGAAATAAAAACTAAAATGTTGTGTTTTAATG-AAGTTGTAAGGGCTGGGCATGAAGGG-ATTTGCACgctgaggtgggaggatcacttgagcccaggagttcaagaccagccagggcaacacagtgagactcatctttaTTTTATTTTTTTTTTAAAAAGAAGG--TATTAAAGATG i ponAbe2.chr19 C 0 I 1254 s nomLeu3.chr10 102831333 653 - 106955855 AATCCAAAACGTAGAATATGAGACGCCACAGTGATG-TAAGTGAGAAACAGGCAAGTATTTGAAAAT----------------CACACACACA--CATGCACACGTGAATGCATCCACACACGGGCACACACATATGAGTCAGTGTGCATGTACACATATGAGTACTCAGAGTTCAGCTGCAGTGAAA-TAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAGTCATTCTAAATTTTTTT---TTTTTTTTAATCCTGTATGTAAAAGAGTAATTCACCCACTGAAGGATGAGTT-AAATAGCCCAGTA-CCCCAATCACACCTAGGCATGAAACACAATAGTACCATCTAAAATAAAATGATAATTTACAATCAGTAAGTGAAGAAAGGTATGCCAGCAAAATATCTATTGGAAATATTAATATTCAACAAAATGTAACGTAATACAAAAACTTTTAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAAGGCTGGGCATGAAGGG-ATTTGCaggttgaggcggaaggatcacttgagcccagaagttcaagaccagccagggcaacatagtgagactcatctttaTTT------TTTTTAAAAAAGAAGA--TATTAAAGATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55189801 660 + 59248254 ACTCCAAAACGTAGAATATGAGATGCCGCAGTGATG-AAAGTGGGAAACAGTCTAGTATTTGAAAAT----------cacacacacacacaca--catgcacacacGAATGCAACCACACGGGAGCACACACATATGAGTACATGTGCATGTACACATATCAGTACTCAGAGTTCGGCTACGGGGGAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATATAATTGAATGAATACTTAACTAAATAGGCGAAGTTATTCCAAACTATTCA---TTTTTTT--ACCCTGTACGTAAAAGAGTAATTCACCCACTGAAGGATGAGTT-AAATAGCTCAGTAGCCCCAATAACACCTAGGCATGAAACACAACAGTACCATCCAAAATAAAATGATAATTTACAATCGGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGAAATATTAATACCCAATAAAATGTAACATGATACAAAAACTTTCAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGATGTAAGAGCTGGGCATGAAGGGTttttgcaggttgaggtgggaggatcacttgagcccaggagttcaagaccggccagggcaacatagtgagactcATCTTCATTT--ATTTTTTT----AAAGAAGG--TATTAAAGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47296931 657 + 51301725 acTCCAAAACGTAGAATATGAGATGCTGCAGTGATG-AAAGTGGGAAACAgtctaatatttgaaaat------------cacacacacacaca--catgcacacacgaatgcaaccacacgggggcacacacaTATGAGTACGTGTGCATGTACACATATCAGTACTCAGAGTTCAGCTACGGGGAAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATGTAATTGAATGAATACTTAACTAAATAGGGGAAGTTATtccaaattattc----ctttttt--accCTGTACGTAAAAGAGtaattcacccactgaaggatgAGTT-AAATAGCTCAGTACCCCCAGTGACACCTAGGCATGAAACACAATAGtaccatctaaaataaaatgataatttagaATCAGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGaaatattaatatccaataaaatataacatgatacaaaaacttttagaaataaaaactaaaattttgtgttttaatg-aaGTTGTAAGAGCTGGGCATGAAGGGTTtttgcaggctgaggtgggaggatcacttgagcccaggagttcaagaccggccaggacaacatagtgagactcatcttcattt--attttttt----aaagaagg--tatTAAAGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46988685 671 + 50890351 ACTCCAAAACGTAGAATATGAGATGCCGCAGCGATG-AAAGTGGGAAACAGTCTAGTATTTGAAAATcacacacacacacacacacacacgca--catgcacacacGAATGCAACCACACGGGGGCACACACATATGAGTACGTGTGCGTGTACACATATCAGTACTCAGAGTTCAGCTACAGGGGAATTAGAACCTGTCTTCTCTAAAGGCGAGGATAAATGAATCTTCATTCGAAAATATGTAATTGAATGAATACTTAACTAAATAGGTGAAGTTATTCCAAACTCTTCA---TTTTTTC--ACCCTGTACATAAAAGAGTAATTCACCCACTGAAGGATGAGTTAAAATAGCTCAGTACCCCCAATGACACCTAGGCATGAAACACAATAGTACCATCCAAAATAAAATGATAATTTGCAATCGGTAAGTGAAGAAAGGTATGCTATTAAAATATCTATTGGAAATATTAATGTCCAATAAAATGTAACATGATACAAAAACTTTCAGAAATAAAAACTAAAATTTTGTGTTTTAATG-AAGTTGTAAGAGCTGGGCGTGAAGGGTttttgcaggctgaggtgggaggatcacttgagcccaggagttcaagaccggccagggcaacatagtgagactcATCTTCATTT--ATTTTTTT----AAAGAAGG--TATTAAAGATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45555588 636 + 49145316 AATCTAAAATGTAGAATGTGAGATGCCACAGTGATGAAAAATGGGAAACAGGC-AGTATTTAAAAAT----------------CAAacacaca--cacacacacacca-----------------cacacacGTATGAGTACGTGTGCATGTACATATATGAGCACTCAGAGTTCAGCTACAATGGAATTAGAACCTGTCTTCTCTAAAGGCAAGGATAAATGAATCCTCATTCAGAAATATATAATTGAATGAATACTTAACTAAATAGGTGAAATTATTCCAAATTATTCA---TTTTTT---ACCCTGTATGTAAAAGAGTAATTCACCTACTGAAGGATGAGTC-AAAGAGCTCAATACCCACAATAACACCCATGCATGAAACACAGCAGTACCATCTAAAATAAA---ATAATTTCCAATCAGTAAGGGAAGAAGGGTATGCTATTAAAATACCTCTTGGAAATATTGATATCCAACAAAATGAAACATAATAC-AAAACATTTAGAAATTAAAACTAAAAGTTTGTGTTTTAATGTAGGTAGTAAGGGCTGGGCACAAAAGGTATTTGCaggctgaggc-caaggatcacttgagcccagaagttcgagaccagccagggcaacgtagtaagactgatctctatta--aa--ataaaaaaaaggaaGGTATATGAAAGGTG i calJac3.chr22 I 1 I 935 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=2548.000000 s hg38.chr19_GL949753v2_alt 266994 1 + 796479 A s panTro4.chr19 59220438 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047663 1 + 60714840 A i ponAbe2.chr19 I 1254 C 0 s nomLeu3.chr10 102831986 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55190461 1 + 59248254 A i macFas5.chr19 C 0 I 1288 s papAnu2.chr19 47297588 1 + 51301725 A i papAnu2.chr19 C 0 I 1291 s chlSab2.chr6 46989356 1 + 50890351 A i chlSab2.chr6 C 0 I 1337 s calJac3.chr22 45557159 1 + 49145316 A i calJac3.chr22 I 935 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=2800.000000 s hg38.chr19_GL949753v2_alt 266995 1 + 796479 C s panTro4.chr19 59220439 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047664 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102831987 1 - 106955855 C i nomLeu3.chr10 C 0 I 1255 s macFas5.chr19 55191750 1 + 59248254 C i macFas5.chr19 I 1288 C 0 s papAnu2.chr19 47298880 1 + 51301725 C i papAnu2.chr19 I 1291 C 0 s chlSab2.chr6 46990694 1 + 50890351 C i chlSab2.chr6 I 1337 C 0 s calJac3.chr22 45557160 1 + 49145316 C i calJac3.chr22 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=793439.000000 s hg38.chr19_GL949753v2_alt 266996 364 + 796479 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATTAGGGCTCCCGAATGGGGTGAAGACCCACATGCAGAATGTCTCTGAGCCCTGAGAGTGGAGCAGTGTGTTCAGGATCCTGAG-------CCTGTGGAACCAACATTCTCTGAGATGTGAGTCTATGGAATGTGTGTTATAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGGCGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTTGTGTTTATGCAAATTTCATATTGCTGATCAGTCATGCAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGTACCCGAGAGTCTGGAGACACATGTGGG s panTro4.chr19 59220440 364 + 63644993 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATTAGAGCTCCCGAATGGGGTGAAGACCCACATGCAGAATGTCTCCGAGCCCTGAGAGTGGAGCAGTGTGTTCAGGATCCTGAG-------CCTGTGGAACCAACATTCTCTGAGATATGAGTCTATGGAATGTGTGTTATAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGGTGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTTGTGTTTATGCAAATTTCATATTGCTGATCAGTCATGTAGAAGGCAGAGGTCAGTGTGTTCACAGGATTCGTACCCGAGAGTCTGGAGACACATGTGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56047665 363 + 60714840 TGGGAAAAAGCACGGTATGAAATACCAAGGAAGAAGGAATTAGGGCTCCCGGATGGGGTGAAGACCCACATGCAGAGCGTCTCCAAGCCCTGAGAGTGGAGCAGTGTGTTCAGGACCCTGAG-------TCTGCGGAAGGAATCTTCTCTGAGATGTGAGTCTATGGAATGTGTGTTGTAAGACCTGCCTTTTGTTAGTATAATCCAGCAAAAGCCCATGGATGAGGACTCAGTTTTATTTTAGGGGATGTGGGGACAGTATATTTTCTATTCATATTTATGCAAATTTCATAGTGCTGGTCAGTCATGTAGAAGGCAGAGGTCAGTGGGTTCACATGATTCGTACCCGAGAGTCTGGAGACACACGT-GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833243 364 - 106955855 TGGGAAAAATCACTGTATGAAAAACCGAGGAAGAAGGAATGAGGGCTCCCGGATGGGGTGAAGACCCACATGCAGAGTGTCTCCGAGCCCCGAGAGTGGAGCAGTGTGTTCAGGCCTCTGAG-------CCTGTGGAATGAATCTTCTCTGAGATGTGAGTCTATGGAACGTGTGTTGTAAGACCTGCCTTTTCTCAGTATAATCCAGCAAAAGCCCATGGGCGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTTCTATTCGTATTTATGCAAATTTCATAGTGCTGGTCAGTCATGTAGAAGGCAGAGGTCAGTGTGTTCGCAGGATTCGTACCCAAGAGTCAGGAGAAACACGTGGG i nomLeu3.chr10 I 1255 C 0 s macFas5.chr19 55191751 364 + 59248254 TGGGAAAAATTACTGTGTGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGTGAAGACCCATATACAGAGTATCTCCGAGCCCTGAGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCTTGGGTGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTCTTATTCATATTTGTGCAGATTTCATAGTGCTGGTCAGTCATGTAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGCACCCGAGAGTCAGGAGGCACACGTGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47298881 364 + 51301725 TGGGAAAAATTACTGTATGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGGGAAGACCCACATACAGAGTATCTCCGAGCCCTGGGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCTTGGGTGAGGACCcagttttattttaaggaatgtgGGGACAGTAtatttcttattcatctttgtgcaGATTTCATAGTGCTGATCAGTCATGTAGAAGGCGGAGGTCAGTGTGTTCACAGGATTCGTACCTGAGAGTCAGGAGGCACACGCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46990695 364 + 50890351 TGGGAAAAATTACTGTGTGAAAAACTGAGGAAGAAGGAATTAGGGCTCCTGGATGGGGTGAAGACCCACATACAGAGTATCTCTGAGCCCTGAGAGTAGAGCAGTGTGTTCAGGGCCCTGAG-------CCTGTGGAAGGAATCTTCTCTGAGATGTGAGTCTGTGGAATGTGTGTTGTAAGACCTGCCTTTTACTAGTATAATCCAGCAAAAGCCCATGGGCGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATATTTCTTATTCATATTTGTGCAGATTTCATAGTGCTGGTCAGTCATGTAAAAGGTGGAGGTCGGTGTGTTCACGGGATTTGTACCCGAGAGTCAGGAGGCACACGCGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45557161 351 + 49145316 TGGGAAAACCCATTGCATGAAACACGGAGGAAGAAGGAATTAGGGCGCCCCGGTGGGGTGAAGACCCAAGTGCAGAGTGTCTCCAAGCCCCAAGGGTAGAGCAATGTGTTAAGGGCCCTGAGAATCTTCTCTGTGGGAGGAATCGTCTCTGAGATGTGAGTCTATGGAA--TATGCTGTAAGATACGCCTTTTATTAATATAATCCAGCAAAAGCCCAAGGACGAGGACCCAGTTTTATTTTAGGGAATGTGGGGACAGTATGTTTTCTTTTTATATTTATGCCAATTTCCTAGTGCTGGTCAGTCACGTAGAAGGCAGAGGTCAATGTGTTCACAGGATTC------------------ACACATGTGGG i calJac3.chr22 C 0 I 6845 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=297115.000000 s hg38.chr19_GL949753v2_alt 267360 172 + 796479 GGTCCATGGGAAAGGCTGGTGGCCGGGTATGGTGGGAAGGTAATCAGCGACAGATGCCAGAGTCTCCTGCTTGATCTTGCCGAAATCTGGCTCAAATGTTTGGCCTGGCACAACCAAACTAGAACTTGGAAGACGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT s panTro4.chr19 59220804 172 + 63644993 GGTCCATGGGAAAGGCTGGTGGCCGGGTATGGTGGGAAGGTAATCAGCGACAGATGCCAGAGTCTCCTGCTTGATCTTGCTGAAATCTGGCTCAAATGTTTGGCCTGGCACAACCAAACTAGAACTTGGAAGACGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048028 169 + 60714840 GGTCTATGGGAAAGGCTGGTGGCCGGGTATGGCGGGAAGGTAATCAGCGACAGATGCCAGAGTCTC---CTTGATCTTGCCGAAATCTGGCTCAAATGTTTGGCCTGGCAGAATCAAACTAGAACTTGGAAGATGCTGTATAGGTAAAACATAATATTGTAATCATTCATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833607 172 - 106955855 GGTCCATGGGAAAGGCTGGTGGCCGGGTATGGCGGGAAGGTAATCAGCGACAGATGCCAGAATATCCTGCTTGATCTTGCCGAAATCTGGCTCAAATATTTAGCCTGGTACAACCAAACTAGAACATGGAAGACGCTGTATAGGTAAAACATAGTATTGAAATAATTCACAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192115 172 + 59248254 GGTCCGTGGAAAAGGCTGGCGGCCTGGTATGGCGGGAAGGTCATCAGCGATAGACGCTAGAGTCTCTTGCTTGATCTTGCTGAAATCTGGCTCAAATGTTTGGCCTGGCACAACCAAACTAGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299245 172 + 51301725 GGTCCGTGAAAAAGGCTGGCAGCCTGGTATGGCGGGAAGGTCATCAGCGACAGACACTAGAGTCTCCTGCTCGATCTTGCCGAAATCTGGCTCAAATGTTTGGCCTGGCACAACCAAACTGGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991059 172 + 50890351 GGTCCATGGAAAAGGCTGGCGGCCTGGTATGGTGGGAAGGTCATCAGCGATAGACGCTAGAGTCTCTTGCTTGATCTTGCTGAAATCTGGCTCAAATGTTTGGCCTGGCACAACCAGACTAGAACTTGGAAGATGCTGTATAGATAAAACCTAATATTGTAACCATTCATAT i chlSab2.chr6 C 0 I 222 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=26484.000000 s hg38.chr19_GL949753v2_alt 267532 27 + 796479 TCTGTTAAGG------------CTTTGAAAATGTCCTTA s panTro4.chr19 59220976 27 + 63644993 TCTGTTAAGG------------CTTTGAAAATGTCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048197 27 + 60714840 TCTGTTAAGG------------ATTCGAAAATGTCCTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833779 27 - 106955855 TCTGTTAAGG------------CTTTGAAAATGTCCTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192287 37 + 59248254 --TGTTATGGATATGAACATAACGTTGAAAATGTCCTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299417 37 + 51301725 --TGTTATGGATATGAACATAACTTTGAAAATGTCCTTA i papAnu2.chr19 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46991231 222 + 50890351 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=3822.000000 s hg38.chr19_GL949753v2_alt 267559 2 + 796479 AT s panTro4.chr19 59221003 2 + 63644993 AT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048224 2 + 60714840 AT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833806 2 - 106955855 AT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192324 2 + 59248254 AT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299454 2 + 51301725 AT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 46991453 2 + 50890351 AT i chlSab2.chr6 I 222 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=1365.000000 s hg38.chr19_GL949753v2_alt 267561 1 + 796479 A s panTro4.chr19 59221005 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048226 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833808 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192326 1 + 59248254 A i macFas5.chr19 C 0 C 0 s chlSab2.chr6 46991455 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e papAnu2.chr19 47299456 1 + 51301725 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=238587.000000 s hg38.chr19_GL949753v2_alt 267562 160 + 796479 AGATTTCTTTATCCTGGAAGGTAGATGGCAAATGATAACATTTCTTTATTCTAGAGGGTAGATGGCAAACGATAAGATTTCTTTATTCTAGAGGTTAGATGGTGAATGATATGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAACATTTCTCTAT s panTro4.chr19 59221006 160 + 63644993 AGATTTCTTTATCCTGGAAGGTAGATGGCAAATGATAACATTTCTTTATTCTAGAGGGTAGATGGCAAACGATAAGATTTCCTTATTCTAGAGGTTAGATGGTGAATGATATGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAACATTTCTCTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048227 123 + 60714840 AG-------------------------------------ATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATGTCTGTATTCTAGAGGGTAGATGATGAATGATAAGATTTCTTTATTCTAGAAGGTAGATGGCAAACGATAAGATTTCTTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102833809 160 - 106955855 AGATTTCTTTTTTCTAGAGGGTAGATGGTGAGTGATAAGATTTCTTTATTCTAGAGGATAGATGGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTTTTCTAGAGGGTAGATGGTGAGTGATAAGATTTCTTTAT i nomLeu3.chr10 C 0 I 370 s macFas5.chr19 55192327 160 + 59248254 AGATTTCTTTATTCTAGAAGGTAGATGGTGAATGATGAGATTTCTTTGTTCTAGAGGGTAGATGGCGAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAAGATTTCTTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299457 160 + 51301725 AGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTACTCTAGAAGGTAGATGGCAAATGATAACATTTATTTACTCTAGAGGGTAGATGGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTAT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 46991456 160 + 50890351 AGATTTCTTTACTCTAGAAGGTAGATGGCAAATGATAACATTTATTTACTCTAGAGGGTAGATGGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGCAAATAATAAGATTTCTTTATTCTAGAGGATAGATGGTGAATGATAAGATTTCTTTAT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=185819.000000 s hg38.chr19_GL949753v2_alt 267722 124 + 796479 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGCTGGCGAACGATAAGATTTCTTTACTCTAGAGGGTAGACGGCAAATGATAAGATTTGTTTACTCTAGAGGGTAGA s panTro4.chr19 59221166 124 + 63644993 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGCTGGCGAACGATAAGATTTCTTTACTCTAGAGGGTAGACGGCAAATGATAAGATTTGTTTACTCTAGAGGGTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048350 87 + 60714840 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGATAGCGAATGATAAGATTTC-------------------------------------TTTATTCTAGAGGGTAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834339 124 - 106955855 TCTAGAGGGTAGATGGTGAATGATAAGATGTCTTTATTCTAGAGGGTAGATGGCAAATGGTAAGATTTCTTTACTCTAGAGGGTAGATGGCAAATGATAAGATTTGTTTACTCTAGAGGGTAGA i nomLeu3.chr10 I 370 C 0 s macFas5.chr19 55192487 124 + 59248254 TCTAGAAGGTAGATGGCAAATGATAACATTTATTTACTCTAGAGGGTAGATGGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGCAAATGATAAGATTTCTTTATTCTAGAGGATAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299617 124 + 51301725 TCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGATGGTGAATgataatatttctttattctagAGGGTAGATGGTGAATGATAACATTTGTTCATTCTAGAGGGTAGA i papAnu2.chr19 C 0 I 181 s chlSab2.chr6 46991616 124 + 50890351 TCTAGAGGGTAGATAGTGAATGATGAGATTTCTTTATTCTAGAGGGTAGATGGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGATAGTGAATGATAAGATTTCTTTATTCTAGAGGGTAGA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=54696.000000 s hg38.chr19_GL949753v2_alt 267846 31 + 796479 TGGTGAATGATAACATTTCTTTATTCTAGAG s panTro4.chr19 59221290 31 + 63644993 TGGTGAATGATAAGATTTCTTTATTCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048437 31 + 60714840 TGGTGAATGATAACATTTCTTTATTCTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834463 31 - 106955855 TGGTGAACGATAAGATTTCTTTACTCTAGAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192611 31 + 59248254 TGGTGAATGATAAGATTTCTTTATTCTAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299922 31 + 51301725 TGGCGAATGATAAGATTTCTTTATTCTAGAG i papAnu2.chr19 I 181 C 0 s chlSab2.chr6 46991740 31 + 50890351 TGGTGAATGATAACATTTGTTTATTCTAGAG i chlSab2.chr6 C 0 I 107 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=14571.000000 s hg38.chr19_GL949753v2_alt 267877 10 + 796479 AGTAGATTGT s panTro4.chr19 59221321 10 + 63644993 AGTAGATTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048468 10 + 60714840 GGTAGATGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834494 10 - 106955855 GATAGATGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192642 10 + 59248254 GGTAGATGGT i macFas5.chr19 C 0 I 329 s papAnu2.chr19 47299953 10 + 51301725 GGTAGATGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991878 10 + 50890351 GGTAGATGGT i chlSab2.chr6 I 107 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=6603.000000 s hg38.chr19_GL949753v2_alt 267887 4 + 796479 GAAT s panTro4.chr19 59221331 4 + 63644993 GAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048478 4 + 60714840 GACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834504 4 - 106955855 GAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192981 4 + 59248254 GAAT i macFas5.chr19 I 329 C 0 s papAnu2.chr19 47299963 4 + 51301725 GAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46991888 4 + 50890351 GAAT i chlSab2.chr6 C 0 I 126 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=21192.000000 s hg38.chr19_GL949753v2_alt 267891 19 + 796479 ATTTGGTCCTTCATGTTTT s panTro4.chr19 59221335 18 + 63644993 ATTTGGTCCTTCATG-TTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048482 18 + 60714840 ATTTGGTCCCTCATG-TTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834508 18 - 106955855 ATTTGGTCCTTCATG-TTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55192985 18 + 59248254 ATTCGGTCCCTCATG-TTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299967 18 + 51301725 ATTCGGTCCCTCATG-TTT i papAnu2.chr19 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46991892 126 + 50890351 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=1011767.000000 s hg38.chr19_GL949753v2_alt 267910 578 + 796479 CTCAGGATCCTCCCTCCAAACATTCTATCCTATACAGCAAAGCTTTACATCCTTCAAACACAACAGTCGTCTTGGACCTAGATATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT-TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCATTTTGCATACTTCTGTCTGACTGTCATAGGTGAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCCGTGATTTTCCTTTCGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACGTggtgtactttggttctgcctggaaaggcaggaagtctcgaagtgaggagctcacaggtcaaagg-agattgaaatgttttcagacagaataggcaaatccgtagagacagaaagcacacttgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtaggatgatgacaatgtgtggaacaggatggcagtgatggttacacaGTGATCTGAGGAGAAGATACACAGG s panTro4.chr19 59221353 578 + 63644993 CTCAGGATCCTCCCTCCAAACATTCTATCCTATACAGCAAAGCTTTACATCCTTCAAACACAACAGTGGTCTTGGACCTAGACATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT-TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCATTTTGCATACTTCTGTCTGACTGTCATAGGTGAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCCGTGATTTTCCTTTCGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACGTggtgtactttggttctgcctggaaaggcaggaagtctcgaagtgaggagctcacaggtcaaagg-agattgaaatgttttcagacagaataggcaaatccgtagagacagaaagcacactcgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgacaatgtgtggaataggatggcagtgatggttacacaGTGATCTGAGGAGAAGATACACAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56048500 575 + 60714840 CTCAGGATCCTCCCTCCAAACATTCTATCCTATGCAGCAAAGTTTTACATCCTTCAAACACAACAGTGGTGTTTGACCTAGACATGTTGAACTCTTTAATGGTAGGACTCAAGTCCTCTTGCTGT-TTGGGAGAATTCAGAAAAGAATCAGCCCCAGTCATTTTGCATACTTCTGTCTGACTGTCATAGGTCAGTAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCAACCTGAGGTCTTGTCTTCACCTGGATGTCTATCCTGCTTCTGTGATTTTCCTTTTGTGGATCACCAACACACTGCAAATGCCTATCATTGCTTTTGACATggtgtactttggttctgcctggaaaggcagggcatcttaaaatgaggagctcacaggtcataggtggattaaaagatttTtagccagaataggcaaatccgtagagacagaaagcatactcgtgg-tagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgataatgtgtggaacgggatggcagtgatgtttacacaaTGATCT---GAGAAGCTGTACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102834526 576 - 106955855 CTCAGGATCCTCCCTCCAAACCTTCTATCCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGCGGTCTTGGACCTAGACATGTTGAACTCTTTAATGCTAGGACTCAAGTCCTCTTGCTGT-TTGGGACAATTCAGAAAAGAATCAGCCCCAGTCATTTTGCATAGCTCTATCTGACTGTCATAGGTGAGCAGAAAGAAACAGCTCAACTGCTTGACAAGATTCATCAACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTCCTTCTGTGATTTTCCTTTCATGGATCGCCAACACACTGCAAATGCCTATCATTGCTTTTGACATggtgtactttggttctgcctggaaaggcagggcatcttaaaatgaggagctcataggtcataggtggattaaaagattttcAGccagaacaggcaaatccatagacatagaaagcacactcgtggttagcaggtgctggagggaagagggaatggggagtggctgctgaatgggtgtagggtgatgacaatgtgtggaacaggatggcagtgatggttacacaaTGATCT---GAGAAGCTGCACAGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55193003 580 + 59248254 CTCACGTTCCTCCCTCCAAACATTCTATTCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGTGGTCTTTGACCTAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTTCTCTTGCTGTTTTGGGACAATTCAGAAAAGAATCAGCCCCAGTCCTTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATTCTACTTCTGTGATTTTCCTTTCGTGGATCACCAACGCACTGCAAACGCCTATCATTGCTTTTGACATGGGGtactttggttcttcctggaaaggcagggagtctcagagtgaggagctcacagatcataggcagattgaaatgttttcAGCAagaataggcaaacccatagagacagaaagcacactcgtggttagcaggtgctggagggaggaaggaatggggggtggctgctgactcggtgtagggtgatgacaatgtgtggaacaggatggcagtgatggttacacaaTGATCTGAGGAGAAGCTGCACAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47299985 579 + 51301725 CTCACATTCCTCCCTCCAAACATTCTATTCTATGCAGCAGGGTTTTACATCCTTCAAACACAACAGTGGTCTTTGACCTAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTCCTCTTGCTGTTTTGGGACAATTCAGAAAAGAATCAG-CCCAGTCATTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGCCTGCAGCTGGATTTCTATCCCACTTCTGTGATTTTCCTTTCGTGGATCACCAACGCACTGCAAACTCCTATCATTGCTTTTGACATGGTGTACTTTGGTTCTGCCTGGAAAGGCAGGGAGTCTCGGAGTGAGGGGCTCACAGATCATAGGCAGATTGAAATGTTTTCAGCAAGAATAGGCAaacccatagagacagaaagcacacTCATGGTTAGCAGGTGCTGGAGGGAAGAAGGAATGGGGAGTGGCTGCTGACTGGGTGTAGGGTGATGACAATGTGTGGAACAGGATGGCAGTGATGGTGACACAATGATCTGAGGAGAAGCTAAACAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992018 580 + 50890351 CTCAGGATCCTCCCTCCAAACATTCTATCCTGTGCAGCAGGGTTTTACATCCTTCCAACACAACAGTGGTCTTTGACCCAGACATGTTGAACTCTTTAGTGCTAGGACTCAAGTCCTCTTGCTGTGTTGGGACAATTCAGAAAAGAATCAGCCCCAGTCATTTTGCATACTTCTGTCTGACTGTCCTAGGTGAGTAGAAAGAAACAGTTCAACTGCTTGACAAGATTCATTGACCTGAGGTCTTGTCTGCAGCTGGATTTCTATCCTACTTCTGTGATTTTCCTTTCATGGATCACCTACACACTGCAAACGCCTATCATTGCTTTTGACATGGGGtactttggttctgcctggaaaggcagggagtcttggagtgaggagctcacagatcataggcagattgaaatgttttcAGCAagaataggcaaagccatagagacagaaagcacactcgtggttagcaggtgctggagggaggaaggaatggggagtggctgctgactgggtgtagggtgatgacaatgtgtggaacaggatggcagtgatggtgacacaaTGATCTGAGGAGAAGCTGCACAGG i chlSab2.chr6 I 126 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3733899 79304 - 64156825 T a score=183545.000000 s hg38.chr19_GL949753v2_alt 268488 80 + 796479 TAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTTGGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGT s panTro4.chr19 59221931 80 + 63644993 TAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTCGGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049075 80 + 60714840 TAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGGTCAGAGAGGGTGTGAGGGCATCAGGGTGGATTTATCTTTTTCTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835102 80 - 106955855 TAGCATCTGAGAAGGAGGGAAGGGCTTGTAGGGTTCAGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3654595 80 - 64156825 TAGCATCTGATAAGGAGGGAAGCGCTTGTAGGGTCCACACAGGAGGTGAGGGCATCATGGTGCATTTATCTTTTCCTGGT i rheMac3.chr19 T 79304 C 0 s macFas5.chr19 55193583 80 + 59248254 TAGCATCTGAGAAGGAGTGAAGGGCTCACAGGGTTCAGAGAGGGTGTCAGAGCATCAGGGTGGATTTATCTTTTCCTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300564 80 + 51301725 TAGCATCTGAGAAGGAGGGAAGGGCTCACAGGGTTCAGAGAGGGTGTCAGGGCATCAGGGTGGATTTATCTTTTCCCGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992598 80 + 50890351 TAGCATCTGAGAAGGAGGGAAGGGCTCACAGAGTTCAGAGAGGGTATCAGGGCATCAGGGTGGATTTATCTTTTCCTGGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e canFam3.chr1 102772849 2946 + 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I a score=438400.000000 s hg38.chr19_GL949753v2_alt 268568 186 + 796479 TGAAATCTGATACTCT-CCCATTGATTTAGTTA-CTGAAGCACGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAATAAAGCACACCAGGGAGTATGGCAATGAGGAATAAAGAAGACTGTGTTA-CACACCA-TGGACCAGAGCACACAGATGTGCAGAGGTGTGGATCCAGCCCTGCCATGTGGGA s panTro4.chr19 59222011 187 + 63644993 TGAAATCCGATACTCT-CCCATTGATTTAGTTA-CTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAATAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTAACACGCCA-CAGACCAGGCCACACAGATGTGCAGAGGTGTGGACCCAACGCTGCCATGTGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049155 187 + 60714840 TGAAATCTGACACTCC-CCCATTGATTTAGTTA-CTGAAGCACGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAGGAAGACTGTGTTAACACGCCA-CGGACCAGAGCACACAGGTGTGCAGAGGTGTGGACCCAACGCTGCCATGTGGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835182 186 - 106955855 TGAAATCCGATACTCT-CCCATTGATTTAGTTA-CTGAAGCATGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAGGAAGACTGTGTTA-CACGCCA-TGGACCAGAGCACACAGGTGTGCAGAGGTGTGGACCCAACGCTGCCATGTGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3654675 186 - 64156825 TGGAATCTGATCTTCT-CCCATTGAATTAGCTC-CTAAACCAGGTGTGGAACTCTGAATGGAAGACATGAAGACCCAATAACGTACACCAGGAAGTGTCGCAATGAGAAATGAAGAGGACTGTGTGA-CATGCCA-TGGACCAGAGCACGCAGGTGTGCAGAGGTGTGGACCCAAGACTGCCCTGTGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55193663 187 + 59248254 GGAAATCCGATATTTTCCCCATTGATTTAGTTA-CTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTA-CGCGCCA-TGGACCAGAGCACGCAGGTGTGCAGAGCTGTGGAGCCAACGCTGCCGTGTGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300644 186 + 51301725 GGAAATCCGATACTTC-CCCATTGATTTAGTTA-CTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATAAAGAAGACTGTGTTA-CATGCCA-TGGACCAGAGCACGCAGGTGTGCAGAACTGTGGACCCAACGCTGCCGTGTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992678 186 + 50890351 GGAAATCCGATACTGC-CCCATTGATTTAGTTA-CTGAAGCGTGTTTGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACCAGGGAGTGTGGCAATGAGGAATATAGAAGACTGTGTTA-CACGCCA-TGGACCAGAGCACACAGGTGTGCAGAGCTGTGGACCCAACGCTGCCATGTGGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19717935 161 - 122678785 TGGGACTTGGTGTTCT-ACCATTTATTTAGTTATTTAAAACAGAATCTGTGTTCTGAGCCGAAGA-------GCGCA------CACACCAGGGAATGCGGTAAATA-AAATAGAGAAAGTTATATTT-CATGAAAGTGGAACAGAGCATGAA-------------GTGGACCCAGAGATATCCTGGAGGA i canFam3.chr1 I 10192 C 0 e mm10.chr7 3845320 58957 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I a score=345025.000000 s hg38.chr19_GL949753v2_alt 268754 204 + 796479 TGTAGCCTCATGTCTA----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAA------------------CATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGC---------AAAATATCTCTGCAATCCAACACTGATTCCTCCTTCTAGAAATTATCAGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCT s panTro4.chr19 59222198 208 + 63644993 TGTAGCCTCATGTCTATCTGGGGGTGGGGAAAGAAGAGGATCCAACCAAGGGAAGTCAA------------------CATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGG---------AAAATATCTCTGCAATCCAACACTGATTCCTCCTTCTAGAAATTATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049342 197 + 60714840 TGTAGCCTCAGGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAA------------------TATTAATAGAGAGGAAAGGTATCACATGTTAA-------CCTTGGATCACTCCAG---------AAAATATCTCTGCAATCCAACACTGATTCCGCCTTCTAGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3654861 203 - 64156825 TGTAGCCTCATGTCTA----AGGATGGGAAAAGAAGCAGATCCAACCAAGGAAAGTCAA------------------CATTAATGGAGAGGAAAGGTGTCACATTTTAATGGTTCTCCATGGATTACCCCAG---------AAAATGTCCCTGCACTCAAACATTGGTTCCTTCCTCTAGAAACGACCAGCAGACAGTCCAGATAGCATT-GCCCTAGATTTTCTTCCAGAATCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55193850 204 + 59248254 TGTAGCCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATTCAACCAAGGGAAGTCAA------------------CATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCCGG---------AAAATGTCTCTGCAATCCAACACTGATTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCGGAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47300830 198 + 51301725 TGTAGCCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAA------------------CATTAATAGAGAGGAAAGGTATCACATGTTAATGGTCCTCCATGGATCACCCTGG---------AAAATGTCTCTGCAATCCAA------TTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46992864 188 + 50890351 TGTAACCTCATGTCTG----GGGGTGGGAAAAGAAGGGGATCCAACCAAGGGAAGTCAA------------------CATTAATAGAGAGGAAAGGTATCACATGTTAG----------------ATGCTGG---------AAAATGTCTCTGCAATCCAACACTGATTCCTCCTTCTGGAAATGATCGGCAGACAGTCCAGATAGCATTGGCCCTAAATTGTCTCCCAGAACCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19718096 225 - 122678785 TGTAGTCTCATGTCAT----AGGTTGAGGAAAGATGGAAGCCAGTCCAGAAAAAGTCAAGGAAATGCCAGGAAGGAGAAATGCTGGGGAGTGAAATGACTACAGTTTATTTGC---ATATGAGGCACTACAGCACCAATCCAGACTTTTTCTGCACCCAAACCATGTTTATACA--CAGAATATTCTCAGCAGACTGTTTCTCTAGCTTATGCCC-AGATTTTCTTCCAGAACCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3845320 58957 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=262811.000000 s hg38.chr19_GL949753v2_alt 268958 129 + 796479 CCTGGGATCACCATATCTATTCCCAAGGTTCCACCACTCTGAGAGATGCATTGTCCTCTCTGCTGTTCACCTCCTAGCTGCATCTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCT s panTro4.chr19 59222406 129 + 63644993 CCTGGGATCACCATATCTATTCCCAAGGTTCCACCACTCTGAGAGATGCATTGTCCTCTCTGCTGTTCACCTCCTGGCTGCATCTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049539 129 + 60714840 CCTGGGATCACCATATCTGTTCCCAAGTCTCCACCACTCTGAGAGGTGCATTGTCCTCTCTGCTATTCACCTCCTGGCTGCATCTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3655064 130 - 64156825 CCTGGGATCATCAGATCTGTTCCTGAGGCTTCACGACTCCGAAAGGTCCATTATCCTCTCTGTTGTTCACCTCCCGGCTGCATCTTGGGAAGCTTCTCCAGCTATGCCGAGCCTCAAATAACAGAATCCC i rheMac3.chr19 C 0 I 93607 s macFas5.chr19 55194054 127 + 59248254 CCTGGGATCACCAGATCTATTCCCAAGGCTCCC--ACTCTGAGGGGTGCATTGTCCTCTCTGCTGTTCACCTCCCGGCTGCATTTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301028 127 + 51301725 CCTGGGATCACCAGATCTATTCCCAAGGCTCCC--ACTCTGAGGGTTGCATTGTCCTTTCTGCTGTTCACCTCCCGGCTGCATTTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993052 127 + 50890351 CCTGGGATCACCAGATCTATTCCCAAGGCTCAC--ACTCTGAGGGGTGCATTGTCCTTTCTGCTGTTCACCTCCCGGCTGCATTTTAGG-GGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3786363 129 + 145441459 CTTTGGGTCATCAGCTTTATTTCCCAGCGTGTAGAACATTGAAAGATGCATTCTTTTCTCTTTAGATTAGTTCCCAGCTACAGGGTGGG-TCTGTCTATGGCTTCGCCAAGCCTCAGTGGCTAGAATCGA i mm10.chr7 T 58957 C 0 s canFam3.chr1 19718321 126 - 122678785 CTTGATATCCTCAACGTCATTTCCAATGTTCTACCTCACTGAACAGT---CGGTCTTGTCTCACAGTTATGTCCTGGCTGCACCTTGGG-GTCTTCTCTGACTATGCTGAGCTTGAAAGAGCAGCACCCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=394633.000000 s hg38.chr19_GL949753v2_alt 269087 183 + 796479 GAGGACCACCAGGATCAAGCCAGCCTTGCCCATGTGGATGAGATTCTCCACTGTGTAATCCTGGGGGTGTGAGGTTGGGGATGGTGGGCAAAGAGACCACAGAGGTCAGGGCAGATCAACATCACCC-AGGACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACC---TGACCCT s panTro4.chr19 59222535 183 + 63644993 GAGGACCACCAGGATCAAGCCAGCCTTGCCCATTTGGATGAGATTCTCCACTGTGTAATCCTGGGGGTGTGAGGTTGGGGATGGTGGGCAAAGAGACCACAGAGGTCAGGGCAGATCAACATCACCC-AGGACCTCTGGATGTCCACCCAGGGCACCCACCTCCCTTTCACAGGACC---TGACCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049668 183 + 60714840 GAGGACCACAAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATATTGGGGGTgtgaggctggggatggtgggcaaagaggtcacagaggtcagggcagatcaacatcacct-aggacctCTGGATGCCCACCCAGAGCACCCACCTCCCCTTCACAGGACC---TGACTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3748801 183 - 64156825 GAGGACCACCAGGATTAAGCCCGCCATGCCCATGCGGATGAGATTCTCCACTGTGTAATCCTGGGAGTGTGAGGCTGGGGATAGTGGACAAGGAGGTCACAGAGGTCAGGACAGATCAACATCACCC-AGGACCTCTGGATGTCCACCCAGAGCACATCCTTACCCTTGACAGGACC---CCACCCT i rheMac3.chr19 I 93607 C 0 s macFas5.chr19 55194181 183 + 59248254 GAGGACCACCAGGATCAAGCCAGCCATGCCCATGTGGATGAGATTCTCCAGTGTGTAATCCTGGGGGAATGAGGTGGGAGATGGTGGACAAAGAGGCCGCAGAGGTCAGGGCAGATCAGCAACGCCC-AGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACC---TGACCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301155 183 + 51301725 GAGGACCACCAGGATTAAGCCAGCCATGCGCATGCAGATGAGATTCTCCACTGTGTAATCCTGGGGGAATGTGGTGGGGGATGGTGGACAAAGAGGCCGCAGAGGTCAGGGCAGATCAGCAACGCCC-AGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACC---TGACCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993179 183 + 50890351 GAGGACCACCAGGATCAAGCCAGCCATGCCCATGCGGATGAGATTCTCCAGTGTGTAATCTTGGGGGAATGAGGTGGGGGATGGTGGACAAAGAGGCCACAGAGGTCAGGGCAGATCAGCATCACCC-AGTACCTCTGGATGTCCACCCAGGGCACCCACCTCCCCTTCACAGGACC---CGACCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3786492 177 + 145441459 AAGGACGATGAGGACCAGGACTGCCATCCCCATCCTGATGAGATTCTCCATTGTGTGATCCTGGTTCTCTGTGGCTGTGGA-GTTAGATACAGAAGTTACAGAAGTTAGGGATGGTCGAAGTTTCCT-AA-----CTAAGCATCCAACCAGGGCCCTTGCTGTCCCTGGAGAGGAAA---AGGTTCT i mm10.chr7 C 0 I 75614 s canFam3.chr1 19718447 177 - 122678785 AAGAACCATCAGGATCAAGGCGGACATGCCGAACCGGATGAGATTCTGCACCGTATAATCTTGGCTGTTTGAGGCTAGAGGTTGTGGACAAGGAAGTTGTGGTGGTTAGGGAAGACTGCAAGTACCCTGGGATCCCTGCATGTCCATCC----------TCTTGCATTTATTGCACCATGTGACCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=210293.000000 s hg38.chr19_GL949753v2_alt 269270 101 + 796479 CTGTG-CCAGCCCCATAACTGAAAGCATCTCCTCACGCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTATCAGCTGCTCCTGAGAATCAA s panTro4.chr19 59222718 101 + 63644993 CTGTG-CCAGCCCCATAACTGAAAGCATCTCCTCACGCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTATCAGCTGCTCCTGAGAATCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049851 101 + 60714840 CTGCG-CCAACCCCATAACTGAAAGAATCTGTTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3748984 101 - 64156825 -TGTGCCCGGCCCCGTAAATGAGAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGACAGGCCGAGGGTGTCAGCTGCTCCTGAGAATGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55194364 101 + 59248254 CTGTG-CCAGCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGGATCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301338 101 + 51301725 CTGTG-CCAGCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAATTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993362 101 + 50890351 CTGTG-CCATCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGGGTCTGAGTTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGGATCAA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3862283 98 + 145441459 TCTTT-CCTGTGCTATGAC---ATGGAATTCTCTATTCGTCTGCCTAGGTTTTGGAAATGTTCTAGCATGAACAGATGTTATCAGCTGGTCCTGAGAATAGT i mm10.chr7 I 75614 C 0 s canFam3.chr1 19718624 101 - 122678785 GTGAG-CCCATTGCCCCACACAGAAATCCTCATCACTCATCCATTTGTGAGTCTGACTTGTGATGTGATGATCTGACAGTATCAGCTAGTCCTGAGAGTCAG i canFam3.chr1 C 0 I 20482 e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=246067.000000 s hg38.chr19_GL949753v2_alt 269371 153 + 796479 AGCAAAGGAGAAG-----------TACCCTGAGCCAGCC------TCTCCCATGGGCTCGGCATTCT-TATCTTCC-------CC--TGTC----TCCTGACATGAGTTCTAAGGAGTTCCTTAGTAAACTCTTC-CTCT---GTAGCAGTGTTCGTTCCGTTCTTCTTAATGAATTATTTCAGCTTT s panTro4.chr19 59222819 153 + 63644993 AGCAAAGGAGAAG-----------TACCCTGAGCCAGCC------TCTCCCCTGGGCTCGGCATTCT-TATCTTCC-------CC--TGTC----TCCTGACATGAGTTCTAAGGAGTTCCTCAATAAACCCTTC-CTCT---GTAGCAGTGTTCGTTCCGTTCTTCTTAATGAATTATTTCAGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56049952 153 + 60714840 AGCAAAGGAGAAG-----------TACCCTGAGCCAGCC------TCTCCCCTGGGCTCAGCATTCT-TATCTTCT-------CC--TGTC----TCCTGACATGAGTTCTAAGGAGTTCCTCAATAAACCCTTC-CTCT---GTAGCAGTGTTCGCTCCGTTCTTCTTAATGAATTATTTCAGCTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3749085 158 - 64156825 AACAGAGGGGAAG-----------AGCCCTGAGCCAGCC------TCTCCCCCGGGCTCTTCACTCT-TACCTTCC-------CCTATGTC----TCCTGACAAGAGTTCTAGTGAGTTCCTCGATAAACCCTTC-CTCTGCCGCAGCAGCACTCCCTTCAGTCTCCTTATTGAATTATTTCAGACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55194465 153 + 59248254 AACAAAGGAGAAG-----------TACCCTGAGCCAGCC------TCTCTCCTAGGCTCTGCATTCT-TATCTTCC-------CC--TGTC----TTCTGACACGAGTTCTAGTGAGTTCCTCAGTAAACCCTTC-CTCT---GTAGCAGGGTTTCCTCCAGTCTCCTCATGGAACTATTTCAGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301439 153 + 51301725 AACAAAGGAGAAG-----------TACCCTGAGCCAGCC------TCTCTCCTAGGCTCTGCATTCT-TATCTTCC-------CC--TGTC----TTCTGACATGAGTTCTAGTGAGTTCCTCAGTAAACCCTTC-CTCT---GTAGTAGGGTTCCCTCCAGTCTCCTCATGGAACTATTTCAGCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993463 153 + 50890351 AACAAAGGAGAAG-----------TACCCTGAGTCAGCC------TCTCTCCTAGGCTGTGCGTTCT-TATCTTCC-------CC--TGTC----TTCTGACACGAGTTCTAGTGAGTTCCTCAGGAAACCCTTC-CTCT---GTAGCAGGGTTCCCTCCAGTCTCCTCATGGAACTATTTCAGCTTT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3862381 183 + 145441459 AGAAGAAGAGGAGCAGGATGTATCTGTACTTAATCGACCTTAGTGTTTCTTCTGAGTTCCACTCTAT-CATGTATTGGAGATGCC--TATCATTTTCACCATATAAGCT-TATAGAGTTCTAGGATGAATGTTTC-TTGTTATATAGCTGGTTCCCCTCTCTTATTCTTACTAAATTCTTCAAACATT i mm10.chr7 C 0 I 86227 s canFam3.chr1 19739207 161 - 122678785 AGCACATGGTGAG---GAACTGGAGACCCCCATCCAGCC------TGCCTTCT--TCTCTGTGTTCTATATCCCTC-------CA--CTTG----TCATCATCTCGTTCCTCTACAGTTCCTAAACTAGCCCTTCACTGC---ACTAGAGGGGTTCGTCTGCTCTCCCCAGTGGATGCCCTCAGTCTC i canFam3.chr1 I 20482 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=81430.000000 s hg38.chr19_GL949753v2_alt 269524 44 + 796479 CCTGCTTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGG s panTro4.chr19 59222972 44 + 63644993 CCTGCTTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050105 44 + 60714840 CCTGTGTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3749243 44 - 64156825 CCTGTGTCCTACAAATCCAGACGTTGCTCCTGAGGCATTTGGGG i rheMac3.chr19 C 0 I 361 s macFas5.chr19 55194618 42 + 59248254 CCTGTGTTCTACAAATCCAAACATTGCTCTTGAGTCATTTGG-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301592 44 + 51301725 CCTGTGTTCTACAAATCCAAACGTTGCTCTTGAGTCATTTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993616 44 + 50890351 CCTGTGTTCTACAAATCCAAATGTTGCTCTTGAGTCATTTGGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19739368 44 - 122678785 CTTCTTTTCCTTGATTTCAGACTTGGCTTCTGAGTCAGTCTGGA i canFam3.chr1 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=86741.000000 s hg38.chr19_GL949753v2_alt 269568 65 + 796479 GAGAGTTTTCCTTCACCCTGAGGGCTCAGGATCTGCAAGGAA----AGTGGTCCCCAGTACAGAGGTCA s panTro4.chr19 59223016 65 + 63644993 GAGAGTTTTCCTGTAACCCGAGGGCTCAGGATCTGCAGGGAA----AGTGGCCCCTGGTACAGAGGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050149 65 + 60714840 GAGAGTTTCCCTGTACCCCGAGGGCTCAGGATCTGCAAGGAA----AGTGGTCCCCAGTACAGAGGTCA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55194660 64 + 59248254 GAGAGTTTTCCTGTACCCCAAGGGCTCAGGATCTGCAAGGAA----AGT-GTCCCCAGTATAGAAATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301636 64 + 51301725 GAGAGTTTTCCTGTACCTCAAGGGCTCAGGATCTGCAAGGAA----AGT-GTCCCCAGTACAGAAATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993660 64 + 50890351 GAGAGTTTTCCTGTACCCCAAGGGCTCAGGATCTGCAAGGAA----AGT-GCCCCCAGTACAGAAATCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19739412 66 - 122678785 TAGATTCTGGCTGTGCCTCAGGTGCTCAGGGT-TGCAGAGAACTATAGC--CTCCCAACACAGAAATCA i canFam3.chr1 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 3749287 361 - 64156825 I a score=330910.000000 s hg38.chr19_GL949753v2_alt 269633 171 + 796479 CTGAGCCCTGTGTGCTGTCTGTGCAGCCTGGGACACGGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGT-TTCACGGATCCACCAGCTGAGGACCCAGGCTCCCTGGATGAGGGGTTGGTCCTCAGGGGCTCCCGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGG s panTro4.chr19 59223081 171 + 63644993 CTGAGCCCTGTGTGCTGTCTGTGCAGCCTGGGACACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGT-TTCACGGATCCACCAGCTGAGGACCCAGCCTCCCTGGATGAGGGGTTGGTCCTCAGGGGCTCCCGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050214 171 + 60714840 CTGAGCCCTGTGTGCTCTCTGTGCAGCCTGGGACACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGT-TTCACGGATCCACCAGCTGAGGACCCAGGCTCCACGGATGAGAGGTTAGTCATCAGGGGCTCCTGAATGTCAGAAGCACAAAGCGGTGAAAGTCTGGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 3749648 171 - 64156825 CTGAGCCCCGTGCACTGTCTGTGCAGCCAGGGACACAGGAGCACATAAGCCAATTCCCCCGGAGAGGAGAGT-TTCACTTATCCACCAGCTGAGGACCCAGGCTCCACGCATGAGAGGTTGGTCCGCAGGGGCTCCCCAGTGTCAGAAGCACAAAAGGGGGAAATTCTGGGG i rheMac3.chr19 I 361 I 293 s macFas5.chr19 55194724 171 + 59248254 CTGAACCCTGTGTACTGTCAGTGCAGCCTGGGACACAGGAGCACATGAACCAATTCCCCTGGAGATGAGAGT-TTCACAGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTTGGTCCTCAGGGGCGCCTCAATGTCAGAAGCAGAAAGGGGTGAAAGTCTGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301700 171 + 51301725 CTGAGCCCTGTGTGCTGTCAGTGCAGCCTGGGACACAGGagcacatgagccaattcccccGGAGATGAGAGT-TTCACGGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTTGGTCCTCAGGGGTGCCTCAATGTCAGAAGCAGAAAGGGGTGAAAGTCTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993724 171 + 50890351 CTGAGCCCTGTGTGCTGTCGGTGCAGCCTGGGACACAGGAGCACATGAGCCAATTCCCCCGGAGATGAGAGT-TTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGCATGAGGGGTTGGTCCTCAGGGGCGCCTCAATGTCAGAAGCAGAAAGTGGTGAAAGTCTGGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19739478 164 - 122678785 --TGTCCTTGTATGTTTACTGTTCAGTCTGGGACATAAGACCTCCT-AGCTCACAACCCTGCAGATGAGAGTGCTCAATGATTCAGTAGCCAAGAATCCAGCATCCAAGGAAGAGGCATTGGT-GTCAGGGGCTCC----TGTCAGGAGGACAGAGGTGCCAATGTGTGGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C a score=12499.000000 s hg38.chr19_GL949753v2_alt 269804 9 + 796479 CTGCCTCCC s panTro4.chr19 59223252 9 + 63644993 CTGCCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050385 9 + 60714840 CTGCCTCCC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55194895 9 + 59248254 CTGCCTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301871 9 + 51301725 CTGCCTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993895 9 + 50890351 CTGCCTCCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19739642 9 - 122678785 TAGAGTCCC i canFam3.chr1 C 0 T 20926 e mm10.chr7 3862564 86227 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 3749819 293 - 64156825 I a score=498563.000000 s hg38.chr19_GL949753v2_alt 269813 425 + 796479 -----------------CTTCACCTGGGTTTTCATTGTCCAATTAATCTAATTAACTAATTCTTCATATAATCAGGAAAACCTAGAATGATGTGATACCTTCCCCCCGGCCCCCATCCAAAAATATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAATCTAGGTGAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttatttattatttttattatttatttatttatttattgaggcagagtcttgctctgttgctcaggctggagtgcagtggtgtgatctcggctcactgcaagctccgtctcctgggttcaagcaattctcctg-ccccagcatcccgagtagctgggattacaggtgcacgccaccacgcccagctac s panTro4.chr19 59223261 418 + 63644993 -----------------CTTCACCTGGGTTTTCATTGTCCAATTAATCTAATTAACTAATTCTTCATATAATCAGGAAAACCTAGAATGATGTGATACCTTCCCCCCGGCCCCCACACAAAAATATCTTGTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAATCTAGGTGAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttatttattatttttattatttatttatt--------gaggcagagtcttgctctgttgctcaggctggagtgcagtggtgtgatctcagctcactgcaaccttcgcctcccgggttcaagcaattctcctg-ccccagcatcccgagtagctgggattacaggtgcacgccaccacgcccggctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050394 422 + 60714840 CTTCATGCCCTGAGCCACTTCACCTGGGTTTTCATTGTCCAATTAATCTAATTAACTAATTATTCACATAATCAGGAAAACCTAGAATGATGTGATACCTTCCCCCCTGCCCCCACACACAAATATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGTGAAGCTAGGTGAATCTAGACCAGTAACAAACATGTAAACTCCTACCACATCAAATGTCttatttatttat------------ttatttatttatt--------gaggcggagtcttgctctgttgctcaggctggagtgcagtggtgtgatcttagctcactgcaacctttgcctcccgggttcaaacaattcttctg-ccccagcatcccgagtagctgggattacaggtgcacaccaccacgcccggctaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55194904 422 + 59248254 CTTCATGCCCTCAGCCACTTCACCTGGGTTTTCAATGTCCAATTAAT----CTAACTAATTCTTCATATAGTCAGGAAAACCTAGAATGATGTGATACCTTCCCCTCCATCCCCACTCACAAACATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGTGAATCTAGACCAGTAACAAACATGTAAACTCCCACCACACAAAATATCtt-tttatttatttat--------ttacttatttatt--------gagatggagtctctctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47301880 426 + 51301725 CTTCATGCCCTTAGCCACTTCACCTGGGTTTTCAATGTCCAATTAATCTAACTAACTAATTCTTCATATAGTCAGGAAAACCTAGAATGATGTGATACCTTCCTCTCCATCCCCACTCACAAACATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATTAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGTGAATCTAGACCAGTAACAAACATGTAAACGCCCACCacacaaaatatctt-tttatttatttat--------ttacttatttatt--------gagatggagtctcgctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46993904 422 + 50890351 CTTCATGCCCTCAGCCACTTCACCTGGGTTTTCAATGTCCAATTAAT----CTAACTAATTCTTCATATAATCAGGAAAACCTAGAATGATGTGATACCTTCCCCTCCATCCTCACTCACAAACATCT-GTCTGCTAAATAGTGGTGCTATTAGAGGTTCATAAATCAGTATTTCTGCTTTTACAAAGTGCGAATCTAGGTGAATCTAGACCAGTAACAAACATGTAAACTCCCACCACACAAAATATCtt-tttatttatttat--------ttacttatttatt--------gagatggagtctcgctctgtttcccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcccccagcgtcccaagtagctgggatgacaggtgcgtgccaccacccccagctaa i chlSab2.chr6 C 0 I 2399 e mm10.chr7 3862564 86227 + 145441459 I e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 3749819 293 - 64156825 I a score=273.000000 s hg38.chr19_GL949753v2_alt 270238 1 + 796479 t s panTro4.chr19 59223679 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050816 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C e chlSab2.chr6 46994326 2399 + 50890351 I e papAnu2.chr19 47302306 0 + 51301725 C e macFas5.chr19 55195326 0 + 59248254 C e rheMac3.chr19 3749819 293 - 64156825 I a score=358705.000000 s hg38.chr19_GL949753v2_alt 270239 306 + 796479 ttttttgtatctttagtagagat-ggcggtttcaccatgttggccaggctggtgtcgaactcctgacctcatgatcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccactgtgcccggccTAtttttatttttattgagatggagtctcactctgtcgcacaggttggagtgcagtggcactatctcggttcattgcaacctctgccgcccgggttc---aagtgattcttgtgcttcagcctccctagtatctgggactacagggccgcaccaccatgcctggctaatttt-----tttt s panTro4.chr19 59223680 306 + 63644993 ttttttgtatctttagtagagat-gggggtttcaccatgttggccaggctggtctcgaactcctgacctcatggtcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccactgtgcccggccTAtttttatttttattgagatggagtctcactctctcgcacaggttggagtgcagtggcactatctcggttcattgcaacctctgccgcccgggttc---aagtgattctcgtgcttcagcctccctagtatctgggactacagggccgcgccaccatgcctggctaatttt-----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56050817 307 + 60714840 ttttttgtatctttagtagagatggggggtttcaccatgttggccaggctggtctcgaactcctgacctcatgatcctcccacctcggcctcccaaagtgctgagattgtaggcatgagccaccgtgcccagccTAtttttatttttattgagatggagtctcactctgtcgcacaggttggagtgcagtagcgttatctcggttcattgcaacctctgccgccagggttc---aagtgattctcatgcttcagcctccctagtagctgggactacaggggtgcgccagcatgtctggctaatttt-----tttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55195326 307 + 59248254 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactctctacctcatgatccttctgcctcagcctcccaaagtgctgggattacaggcatgagctaccgcaccaggccTAtttttatttttattgagatggaatctcactcagtcgcataggctggagtgcagtggcgctctcttggctcattgcaacctctgccgcctgggttcatgaggtgattctcatggttcagcctcctgagtagctggcactacaagggtgtgccaccatgcccagctattttt-----ttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302306 312 + 51301725 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactcttgacctcatgatccttctgcctcagcctcccaaagtgctgggattataggtgtgagccaccgcaccaggcctatttttatttttattgagatggaatctcactcagtcgcacaggctggagtgcagtggcgctctctttgctcattgcaacctctgccgcctgggttcatgAGGTGATTCTCATggttcagcttcctgagtagctggcactacaggggtgtgccaccatgcccagctatttttttttgttt- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46996725 307 + 50890351 ttttttgtatctttagtagagat--ggggtttcaccatgttggccaggctggcctcgaactcttgacctcatgatccttctgcctcagcctcccaaagtgctgggattataggtgtgagccaccgcaccaggccTAtttttatttttattgagatggaatctcactcagtcgcacaggctggagtgcagtggcgctctctttgctcattgcaacctctgctgcctgggttcatgaggtgattctcatggttcagcctcctgagtagctggcactacaggggtgtgccaccatgcccagctattttt-----ttt- i chlSab2.chr6 I 2399 C 0 e mm10.chr7 3862564 86227 + 145441459 I e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102835368 0 - 106955855 C e rheMac3.chr19 3749819 293 - 64156825 I a score=307839.000000 s hg38.chr19_GL949753v2_alt 270545 186 + 796479 tgtatttttagtagagatgggcttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcatgagtcactgcgcctggccATCAAATATATTAAGAATATGGAT--ATATTTATCAAGTGAACTTGGAAATACTTACAC s panTro4.chr19 59223986 186 + 63644993 tgtatttttagtagagatgggcttttaccatgttggccaggctcgtatcaaactcctgacctcaggtgatctgcccgccttggctccccaaagtgctgggattacaggcatgagtcaccacgcctggccATCAAATATATTAAGAATATGGAT--ATATTTATCAAATGAACTTGGAAATACTTACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051124 186 + 60714840 tgtatttttagtagagatgggcttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcctgctttggcctcccaaagtgctgggattacaggcgtgaatcaccgcgcccggccATCAAATATATTAAGAatatggat--atatatatcaaatgaacttggatatacctacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835368 184 - 106955855 tgtatttttagtagagacggatttttaccatgttggccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcgttagtcaccaggcccgaccATCAG--ATATTAAGAATATGGAT--ATATATATCAAATGAACTTGGATATACCTACAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55195633 179 + 59248254 tgtatttttagtagagacgagctttta---------ccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgctgggattacaggcgtgagtcaccgtgcccggccATCAAATATATTAAGAATATGGATGAATACATATCAGATGAACTTGGATATGCCTACAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302618 179 + 51301725 tgtatttttagtagagacaagctttta---------ccaggctggtatcaaactcctgacctcaggtcatctgcccgccttggcctcccaaagtgctgggattacaggcgtgagtcaccatgcctggccatcaaATATATTAAGAATATGGATGAATATATATCAGATGAACTTGGATATGCCTACAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997032 179 + 50890351 tgtatttttagtagagatgagctttta---------ccaggctggtatcaaactcctgacctcaggtgatctgcccgccttggcctcccaaagtgatgggattacaggcgtgagtcaccatgcctggccATCAAATATATTAAGAATATGGATGAATATATATCAGATGAACTTGGATATGCCTACAC i chlSab2.chr6 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3749819 293 - 64156825 I a score=801114.000000 s hg38.chr19_GL949753v2_alt 270731 377 + 796479 ACATATTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATGTAAAACTTTAGATATTTA----AGATGTAGTTACATACATATTGATATTTGAAGTGAGAA-TATTGGCAAGCAATATAGAAAT----AAGTAAAATCT-CCATTGTCTCATGGTTTGTATACATTTCATCAGGAAATTAGAGGAGATCCATAGAAAAGCAATTAGAATGGGGTAATTTGGTAGTGAGTTAGCATGAAATACAATGAATATACTCAAACGAGTAGCTTTCTCATGGATAATTATCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACATATACATTGTTAAAGGTGTTGAATAATTCTTCAAGTTGGAATGAATATAATTCTTC-A s panTro4.chr19 59224172 382 + 63644993 ACATATTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATGTAAAACTTTAGATATTTATTTAAGATGTAGTTACATACATATTGATATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATCT-CCATTGTCTCATGGTTTGCATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGCAATTAGAATGGGGTAATTTGGTAGTGAGTTAGCATGAAATACAATGAATATACTCAAACGAGTAGCTTTCTCATGGATAATTATCTTTTATTTTTTAAATGTGAAAGAATAAAGTACTTCACATATACATTGTTAAAGATGTTGAATAATTCTTTAAGTTGGAATGAATATAATTCTTC-A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051310 382 + 60714840 acatattcaaatgtaacttatataaccacacat-aaatatgtatagatataaaactttagatatttatttaagatgtagttacatacatattgatatTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATTT-CCTTTGTCTCATGGTTTGTATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGCAATTAGAATGGGGTAATTTGGTAGGGAGTTAGCATGAAATACAATGAATATACTCAAACCAGTAGCTTTCTCAGGGATAATTATCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACATATACATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACATAATTCTTC-A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835552 375 - 106955855 ACATATTCAAATGTAACTTACATAACCACACAT-AAATATGTATAGATATAAAACTTTAGATATTTATTGAAGATGTAGTTACATACATATTGATATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAAT----AAGTAAAATTT-CCATTGTCGCATGGTTTGTATACATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGCAATTAGAAGGGGGTAATT-------GAGTTAGCATGAAATACAATGAATATACTCAAACCAGTAGCTTTCTCATGGATAATTATCTTTGATTTTTAAAATATGAAAGAATAAAGTACTTCACACATACATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACGTAATTCTTC-A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750112 380 - 64156825 ACATATTCAAATGTATCTTACATAACCCCATGT-AAATATGTATACATGTAAAACTTCAGCTATGTATTTAAGATGTCGTTACATATATGTTGACATTTAAAGTGAGAAGTGTTGGCACATAATTTAGAAATAAAGAAGTAAAATTTCCCATTGTCTTATGGTTTACACACATTGCATTAGTGAATTAGAGGAGATCCGTTGAAAAGCAATTAGCACAGGGCACTTTAGTAGTG----AGCATGAAATACAATGAATATACTCAAAGCAGTAGCTTTCTCATGGAGAGTTGTCTCT--TCTTTAAAACATGTA--AAGGAAATACTTCACTTATAAATTGTTAAAGGTGGTGAAGAATTCTTTAAATTGGAATGAATGTAATTTTTTAA i rheMac3.chr19 I 293 C 0 s macFas5.chr19 55195812 383 + 59248254 ACATACTCAAATGTAACTTATATAACCACACAT-AAATATGTATAGATATAAAGCTTTAGATATTTATTTAAGATGT-ATTACATACATATTGGTATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTT-CCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTAGAGGAGATCCATAGAAAAGCAGTGAGAATGGGGTCATTTGGTAGTGAGTTAGCACGAAACACAATGAATATACTCAAACT--CAGCTTTCTCATGGATAATTACCTTTTATTTTTAAAATATGAAAGAATAAAGTACTTCACTTATAAATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAACATAATTCTTC-A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47302797 384 + 51301725 ACATACTCAAATGTAACTTATataaccacacataaaatatgtatagatATAAAGCTTTAGATATTTATTTAAGATGT-ATTACATACATATTGGTATTTGAAGTGAGAAATATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTT-CCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTAGAGGAGATCCCTAGAAAAGCAGTGAGAATGGGGTTATTTGGTAGTGAGTTAGCATGAAACACAATGAATATACTCAAACT--CAGCTTTCTCATGGAtaattaccttttatttttaaaatatgaaagaataaagTACTTCACTTATAAATTGTTAAAGGTGTTGAATAATTCTTTAAGTTGGAATGAATATAATTCTTC-A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997211 383 + 50890351 ACATACTCAAAAGTAACTTATATAACCACACAT-AAATACGTATAGATATAAAGCTTTAGATATTTATTTAAGATGT-ATTACATACATATTGGTATTTGAAGTGAGAAACATTGGCAAGCAATATAGAAGTAAAGAAGTAAAATTT-CCGTTGTCTCATGGTTTGTATAAATTTTATCAGGAAATTCGAGGAGATCCATAGAAAAGCAGTGAGAATGGGGTCATTTGGTAGTGAGTTAGCACGAAACACAATGAATATACTCAAACT--CAGCTTTCTTATGGATAATTACCTTTTATTTTTAAAATATAAAAGAATAAAGTACTTCACTTATAAGTTGTTAAAGGTGTTGAATAATTCTTTAAGTTGAAATGAATATAATTCTTC-A i chlSab2.chr6 C 0 C 0 e mm10.chr7 3862564 86227 + 145441459 I e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I a score=179840.000000 s hg38.chr19_GL949753v2_alt 271108 73 + 796479 AATGTCCACCCAGGACACCCAGCTCCTCTTGACAGGACCT-GACCCTCTGTGCCCAGCGTCATCACGGCAAGCA s panTro4.chr19 59224554 73 + 63644993 AATGTCCACCCAGGACACCCAGCTCCTCTTGACAGGACCT-GACCCTCTGTGCTCAGCGTCATCACGGCGAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051692 73 + 60714840 AATGTCCACCCAGGACACCCAGCTCCCCTTGACAGGACCT-GACCCTCTGTGCCCAGCGTCATCACGGCGAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102835927 73 - 106955855 AATGTCCACCCAGGACACCCAGCTCCCCTTGACAGGACCT-GACCCTCTGTGCCCAGCGTCATCACCGCAAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750492 72 - 64156825 AATGTCCACCCAGGACACCCAG-TTCCCTTGACAGGACCT-GACCCTCTGCGCCCAGCGTCTTCACCGCGAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55196195 73 + 59248254 AATGTCCGCCCAGGACACCCAGCTCCCCTTGACAGGACCT-GACCCTCTGCGCCCAGCGTCTTCACCGCGAGCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303181 73 + 51301725 AATGTCCGCCCAGGACACCCAGCTCCCCTTGACAGGACCT-GACCCTCTGCGCCCAGCGTCTTCACCACGAGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997594 72 + 50890351 AATGTCCACCCAGGACGCCCAG-CTCCATTGACAGGACCT-GACCCACTGCGCCCAGCGTCATCACCGCGAGCA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3948791 73 + 145441459 AATATCCATCCAGGGAGTCTGCCTTCCCTGGACAAGATGTGGACTTTCTGCATCCAGTACTATGACTTTGAAG- i mm10.chr7 I 86227 N 0 e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I a score=208543.000000 s hg38.chr19_GL949753v2_alt 271181 74 + 796479 TCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTGTGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCA s panTro4.chr19 59224627 74 + 63644993 TCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTATGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051765 74 + 60714840 TCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTAGTGGTGGGCCGAGGGTCTCAGCTGCTCCTGAGAATCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836000 74 - 106955855 TCTCCTCACTCACCAGCCTTGGAGTCGGACTTGTTTTGTGGTGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750564 74 - 64156825 TCTCCTCACTCACCGGCCTTGGAGTCGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55196268 74 + 59248254 TCTCCTCACTCGCCGGCCTTGGAGTCGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303254 74 + 51301725 TCTCCTCACTCGCCGGCCTTGGAGTTGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997666 74 + 50890351 TCTCCTCACTCGCCGGCCTTGGAGTCGGACTTGGTTTGTGGTGGGCTGAAGGTCTCAGCTGCTCCTGAGAATCA i chlSab2.chr6 C 0 C 0 s mm10.chr7 3786696 74 + 145441459 TCTCTTTATTCATCTGCCTAGGTTTTGGACATGTTCTAGCATGAACAGATGTTCTCAGCTGGTCCTGAGAATAG i mm10.chr7 N 0 C 0 e canFam3.chr1 19739651 20926 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I a score=13225.000000 s hg38.chr19_GL949753v2_alt 271255 8 + 796479 AAACAGAG s panTro4.chr19 59224701 8 + 63644993 AAACAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051839 8 + 60714840 AAACAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836074 5 - 106955855 AAACA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750638 6 - 64156825 GAAC--AG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55196342 8 + 59248254 AAACAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303328 8 + 51301725 AAACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997740 8 + 50890351 AAACAGAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3786770 8 + 145441459 TAGAAGAA i mm10.chr7 C 0 C 0 s canFam3.chr1 19718725 8 - 122678785 AAATAGAG i canFam3.chr1 T 20926 I 25069 e calJac3.chr22 45557512 6845 + 49145316 I a score=19652.000000 s hg38.chr19_GL949753v2_alt 271263 6 + 796479 GAGAAG s panTro4.chr19 59224709 6 + 63644993 GAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051847 6 + 60714840 GAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836079 6 - 106955855 GAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750644 6 - 64156825 GAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55196350 6 + 59248254 GAGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47303336 6 + 51301725 GAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46997748 6 + 50890351 GAGAAG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3786778 6 + 145441459 GAGGAG i mm10.chr7 C 0 I 9094 e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I a score=56620.000000 s hg38.chr19_GL949753v2_alt 271269 29 + 796479 AGACATATTCAGAGGTAACTCATATGACA s panTro4.chr19 59224715 29 + 63644993 AGGCATATTCAGAGGTAACTTATATGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051853 29 + 60714840 AGACATATTCAGAAGTAACTTATATAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836085 29 - 106955855 AGACATATTCAGAGGTAACTTATATAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3750650 27 - 64156825 AGAC--ATTCAGATGTAACTTATATAACA i rheMac3.chr19 C 0 I 410 s macFas5.chr19 55196356 27 + 59248254 AGAC--ATTCAGATGTAACTTATATAACA i macFas5.chr19 C 0 I 102 s papAnu2.chr19 47303342 27 + 51301725 AGAC--GTTCAGATGTAACTTATATAACA i papAnu2.chr19 C 0 I 102 s chlSab2.chr6 46997754 27 + 50890351 AGAC--ATTCAGATGTAACTTATATAACA i chlSab2.chr6 C 0 I 102 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I a score=796202.000000 s hg38.chr19_GL949753v2_alt 271298 372 + 796479 AATT----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAAAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATATTAACTTATTACCAAATTGCCCTCTTCTGATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTAGATGTTAGAATTATCCAGTGATTGGACAACATTGGACATGAAC-CC-CCCAGGCCCAGAGCTGGGCTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCCCATGCCACAGGGAGCCGCCCAGTCAGTTTCCCTCAGGCCACTGTGCTTTAAAACATCCAAACAC s panTro4.chr19 59224744 463 + 63644993 AATTCTATATAAGGCTATATAACCTCCCTG----------------------------------------------------------------------TCAAGGAGAGGTGGGGGTCTTGGGGAGACATTTACAAAATTATGTTCATCTAATTTAAAGAATTACTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGAGTATATTCATTGTATTTCATATTAACTTATTACCAAATTGCCCTCTTCTGATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTAGATGTTAGAATTATCCAGTGATTGAACAACATTGGACATGAAC-CCACCCAGGCCCAGGGCTGAGCTGCACTGTAGCTCCCGCTGACCTCCCCCGGGTTTCTCATGCCACAGAGAGCCCCCCGGTCAGTTTCCCTCGGGCCATTGTGCTTTAAAACATCCAAACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56051882 463 + 60714840 AATTCTATATAAGGCTATATAACCTCCCTG-----------------------------------TCAAGGAGAGGTGGGGGTCTTGGGTAGACATTTAA-----------------------------------AGAATTATGTTCATCTAATTTAAAGAATTATTCAACACCTTCGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTAAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGCATTTCATATTAACTCATTACCAAATTGCCCTCTTCtaatttaaatttaaattaacaattttaaaGCATCTCTTTTTCCTATAAAAGAGGTTTAGTTCGATGTTAGAATCATCCAGTGATTGGACAAGATTGGACATGAAC-CCACCCCGGCCCAGGGCTGAGCTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCACATGCCACAGGGAGCCGCCCGGTCAGTTTCCCTCGGGCCATTGTGCTTTAAAACATCCAAACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102836114 464 - 106955855 AATTCTATATAAGGCTATATAACCTCCCTGTCAAGGAGAGGTGGGGGTCTTGGGTAGACATTTAA----------------------------------------------------------------------AAAATTATGTTCATCTAATTTAAAGAATTATTCAACACCTTTGACAACTTATAAGTGAAGTATTTGATTCCTTTATATTTTTTGAACAAGAGATAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCACGTTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATTAACAATTTTAAAGCATCTCTTTTTCCTATAAAAGGGGCTTATTTAGATGTTAGAATCATCCAGTGATTGGACAAGATAGGACATGAACGCCCCCCAGGCCCAGGGCTGAACTGCACTGTAGCCCCCGCTGACCTCCCCCGGGTTTCACATGCCACAGGGAGCCGCCCGGTCAGTTTCCCTCGGGCCACTGTGCTTTAAAACATCCAAACAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3751087 369 - 64156825 ----------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTCAACACCTTTAACAATGTGTAAGTGAAGTATTTGATTCTTTACATTTTTTAAAACAAGAGATAAGTATCCACGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATATTAACTCACTACCAAATTGCCCCCTTCTAATTTAAATCTAAATTAAC-AATTTAAAGCA---CTTTTTCATATAAAAAACGTTTAGTTAGATGTTAGAATGATCCAGTGATTGGACAAGATTGGACACGAAC-CCACCCAGGCCCAGGGTTGAGCTGCACTGCAGCTCCCGCTGACCTCCCGCGGGTTTCACGAGCCACACGGAGCCCCCCGGTCAGTTTCCCTGGGGCCACTGTGCTTTGAAACATCCAAACAC i rheMac3.chr19 I 410 I 986 s macFas5.chr19 55196485 373 + 59248254 ----------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTCAACACCTTTGACAATTTATAAGTGAAGTATTTGATTCTTTCATATTTTTTAAACAAGAGGTAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCGTATTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATGATCAAATTTAAAGCACCTCCTTTTCCTATAAAAGAGGTTTATTTAGATGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGAAC-CCACCCGGGCCCAGGGTTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGCGGGTTTCACGAGCCACACGGAGCCCCCCGGTCAGTTTCCCTGGGGCCACTGTGCTTTGAAACATCCAAACAC i macFas5.chr19 I 102 I 810 s papAnu2.chr19 47303471 365 + 51301725 ----------------------------------------------------------------------------------------------------------------------------------------------------------------aattatTCAACACCTTTGACAATTTATAAGTAAAGTATTtgattctttcatattttttaaacaagaggTAAGTACCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATAGTAACTCACTACCACATTGCCCTcttctaatttaaatttaaattatcaaatttaAAGCACCTCCTTTTCctataaaagaggtttatttagatGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGGAC-CCACCCAGGCCCAGGGCTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGTGGGTTTCACGAGCCACACGGAGCCCC--------TTTCCCTGGGGCCACTGTGCTTTGAAACATCCAAACAC i papAnu2.chr19 I 102 I 809 s chlSab2.chr6 46997883 373 + 50890351 ----------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATTCAACACCTTTGACAATTTATAAGTGAAGTATTTGATTCTTTCATATTTTTTAAACAAGACGTAAGTGCCCATGAGAAAGCTACTGGTTTGGGTATATTCATTGTATTTCATATTAACTCACTACCAAATTGCCCTCTTCTAATTTAAATTTAAATTATCAAATTTAAAGCACCTCCTTTTCCTATAAAAGAGGTTTATTTAGATGTTAGAATCATGCAGTGATTGGACAAGATTGGACATGAAC-CCACCCGGGCCCAGGGTTGAGCTGCACTGCAGCCCCCGCTGACCTCCCGTGGGTTTCATGAGCCACATGGAGCCCCCCGGTCAGTTTCCCTTGGGCCACTGTGCTTTGAAACATCCAAACAC i chlSab2.chr6 I 102 I 816 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I a score=150115.000000 s hg38.chr19_GL949753v2_alt 271670 290 + 796479 Agccgggcgcggtggctcacgcctataatctcagcactttgggaggctgaggcgggcacatcacaaggtcaggagatcgagaccatcatggttaacacagtgaaaccctgtctctactaaaaatataaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggagacggaggttgcagtgagccgagatcgtgccactgcactccagcctgggagacagagcgagactccgtctcaaaaaaaaa s panTro4.chr19 59225207 290 + 63644993 Agccgggcgcggtggctcacgcctgtaatctcagcactttgggaggccgaggcgggcacatcacaaggtcaggagatcgagaccatcgtggttaacacagtgaaaccctgtctctactaaaaatataaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagccgagaacgcgccactgcactccagcctgggtgacagagcgagactccatctcaaaaaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56052345 290 + 60714840 agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacaaggtcaggagatcgagaccatcatggttaacacggtgaaaccctgtctctactaaaaatataaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctacgcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtaagccgagatcgcaccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaa i ponAbe2.chr19 C 0 I 814 s nomLeu3.chr10 102836578 289 - 106955855 Agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca-aaggtcaggagatcgagaccatcatgtttaacacagtgaaaccccgtctctactaaaaatataaaaaattagcagggcgtggtggcgggcatctgtagtcccagctactcaggaggctgaggcaggagaatggagtgaacccgggaggtgaagcttgcagtgagctgggatcccaccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaca i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 3751456 986 - 64156825 I a score=-584.000000 s hg38.chr19_GL949753v2_alt 271960 8 + 796479 caaa--aaaa--- s panTro4.chr19 59225499 10 + 63644993 caaacaaaaa--- i panTro4.chr19 I 2 C 0 s nomLeu3.chr10 102836867 8 - 106955855 -----aaaaacaa i nomLeu3.chr10 C 0 I 805 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e ponAbe2.chr19 56052635 814 + 60714840 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 3751456 986 - 64156825 I a score=1092.000000 s hg38.chr19_GL949753v2_alt 271968 2 + 796479 aa s panTro4.chr19 59225509 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053449 2 + 60714840 AA i ponAbe2.chr19 I 814 C 0 s nomLeu3.chr10 102837680 2 - 106955855 AA i nomLeu3.chr10 I 805 C 0 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e papAnu2.chr19 47303836 809 + 51301725 I e macFas5.chr19 55196858 810 + 59248254 I e rheMac3.chr19 3751456 986 - 64156825 I a score=9466.000000 s hg38.chr19_GL949753v2_alt 271970 10 + 796479 gaaagaCAGC s panTro4.chr19 59225511 10 + 63644993 gaaaGACAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053451 10 + 60714840 GAAAGACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102837682 10 - 106955855 GAAAGACAGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55197668 10 + 59248254 GAGAGAGGGG i macFas5.chr19 I 810 C 0 s papAnu2.chr19 47304645 10 + 51301725 GAGAGAGGGG i papAnu2.chr19 I 809 C 0 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46998256 816 + 50890351 I e rheMac3.chr19 3751456 986 - 64156825 I a score=799450.000000 s hg38.chr19_GL949753v2_alt 271980 452 + 796479 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTGTTTCAAAATACTGTGGCTTTGTCTTACTAAGCTGAGGTTCCAGGAGGGATGAGTGAAACTGCATGCACCCGCTCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATTTGGAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGAGAGCAGGTCTAGGATTGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTCTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAACCACCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTAGACCAAGTACCTGACTGTGATCTCCCCTGACCCTGGCTCTCCAATG s panTro4.chr19 59225521 449 + 63644993 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTGTTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGGTTCCAGGAGGGATGAGTGAAACTGCATGCACCGGCTCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATTTGGAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGGGAGCAGGTCTAGGATTGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGG-TGCAAGGGGAACGGTCTTTTTCAGGAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCAGGCTCCTCCCACCTGACTCCTAGACCAAGCACCTGACTG--ATCTCCTCTGACCCTGGCTCTCCCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053461 451 + 60714840 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTGTTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTGAAACTGCATGCACCTGCCCCCATCTCTGTTGGCTTTTTAACGCTTACAAGTCTCAGTTATTTGAAGAATCAGGA--CAGGGCCAGAGATGGCTGGAGATGGGAGCAGGTCTAGGA-TGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGACAGTCACATCAAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCTTAGACCAAGCACCTGCCTGTGATGTCCCCTGTCCCTGGCTCCCCCATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102837692 452 - 106955855 AGATTCTAAAACAGTGAGGCTTTGTAAACCTTTGTTGTTTCAAAATATTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTGAAACTGCATGCACCTGCCCCCATCTCTGTTGGCTTTTTAACCCTTACAAGTCTCAGTTATCGGGAGAATCAGGACCCCTGTCCAGAGATGGCTGGAGACGGGAGCAGGTCTAGGA-TGAGTCACATCCCAGATGCCCTAGAAGGTCAGAAATGAAGGGGCTTTGGAGCGGTCACATCCAGGCAGCTCCCCCTTATTCAGATGGGGAGTCCAGGGTGCAAGGGGAACGGTCTTTTTCAGGAGTTCCACCTCCCAAGGAGAGGTTGAGCCATCACAGACCCAGCCCCACCTCCCCAGGCTCCTCCCACCTGACTCCTAGACCAAGCACCTGCCTGTGATCTCCCCTGACCCTGGCTC-CCCATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55197678 450 + 59248254 AGATTCTAAAACAGTGGGACTTTGTAAATCTTTGTTGTTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTAAAACTGCATGCACCTGCCCCCATCTCCGTTGGCTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAGGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGGGAACCAACTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGTCCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTAGAGCAAGCACCTGCCTATGATCGCCCCTGGCCCTGGCTC-CCCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47304655 449 + 51301725 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTGTTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGGGGGATGAGTAAAACTGCATGCACCTG-CCCCATCTCCGTTGGCTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAAGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAATGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGAGAACCAGCTTTTTCAGAAGTTCCACCTCCCAAGGAGAGGCTGAGCCATCACAGACccagctccacctccccaggctccTCCCACCTGACTCCTAGAGCAAGCACCTGCCTGTGATCGCCCCTGGCCCTGGCTC-CCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46999072 450 + 50890351 AGATTCTAAAACAGTGGGGCTTTGTAAACCTTTGTTGTTTCAAAATAGTGTGGCTTTGTCTTACTAAGCTGAGATTCCAGGAGGGATGAGTAAAACTGCATGCACCTGCCCCCATCTCTGTTGGTTTTTTAACCCTTACAAGCCTCCGTTATTGGGAGAATTAGGA--CAAGGCCAGAGAGGGCTGGAGATGGGAGCAGGTCTAGGA-GGAGCCACATCCCAGATGCCCCAGAAGGTCAGAAACGAAGGGGCTTTGGGGTGGTCACATCCAGGCAGCTCCCCGTTATTCAGATGGGGAGTCCAGGGTGCGAGGAGAACCAGCTTTTTCAGACGTTTCACCTCCCAAGGAGAGGCTGAGCCATCACAGACCCAGCCCCACCTCCCCGGGCTCCTCCCACCTGACTCCTACAGCAAGCACCTGCCTGTGATCTCCGCTGGCCCTGGCTC-CCCATG i chlSab2.chr6 I 816 C 0 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3751456 986 - 64156825 I a score=654240.000000 s hg38.chr19_GL949753v2_alt 272432 307 + 796479 AGAGGTGACGGCTCCTGGGAATCCTGCTGAGGGAGGGGGAAAGACCCCGCTGCTCCACTCATCAATGCTGAATCTTAGACACCTCCCTCCCCTCTGAACACTACGGAGGGAACACCTGCCCCATCCCTGGAGCCCCAGGGAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTTCCCTGGAAATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTGGCTGTTTTTTTTTGTGACCCATGGGGTCAGGACTTAGAGGTTGGGA--CCCA s panTro4.chr19 59225970 294 + 63644993 AGAGGTGACGGCTCCTGGGAATCCTGCTGAGGGAGGGGGAAAGATCCTGCTGCTCCACTCATCCATGCTGAACCTCAGACACCTCCCTCCCCTCTGAACACCACGGAGGGAACACCTGCCCCATCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCT-------------CCCCTCTGCTTCCCTGGAAATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTCGTTGTTTTTTTTTGTCACCCATGGGGTCAGGACTTAGAGGTTGCGA--CCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56053912 307 + 60714840 AGAGGTGACGGCTCCTGGGAATCCTGCTCAGGGAGGGGGAAAGACCCTGCTGCTCCACTCAACAATGCTGAACCTCAGACACGTCCCTCCCCTCTGAACACCACGGAGGGAACAGCTGCCCCACCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTGCCCTGGAAATCAGACTCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAAATTCTCTTGAGCTGGGAGTGGCTGGTTTTTTTTGTCACCCATGGGGTCAGGACTTAGGGGTTGGGA--CCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838144 302 - 106955855 AGAGGTGACGGCTCCTGGGACTCCTGCTCGGGGAGGGGGAAAGACCCTGCTGCTCCACTCATCAATGCTGAACCTCAGACACCTCCCTCCCCTCTGAACACCATGGAACGAACACCTGCCCCATCCCTGGAGCACCAGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTCCCCTCTGCTGCCCTGGAAGTCAGACCCTGAATATTGGAGGTAGCATTGAGAAGAGTCTAGAAACTTCTCTTGAGCTGGGAGTGGCTGTTTTT-----TCACCCATGGGGTCAGGACTTAGGGGTTGGGA--CCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3752442 304 - 64156825 AGAGGTGATGGCTCCTGGGAATCCTGCTCCTGGAGGGGGAAAGTGCCCGCTGCTCCACTCGTCAGCGTTGAACCTCAGACACCTCCCTCCCCTGTGACCACCACGGAGGGAACACCTGCCCCATCTCTGGAGCCCCAGGAAGCCACGCGGACCACACCCTT-CTGTCCACCCTCCCCTCTGCTGCCCTGGAAATCAGACCCTGAATATTGAAGGTACCATTGAGATGAGTCTAAAAACTTCTCTTGAACTGGGTGTGAC--GGTGTTTTTGTCACCCAGGGAGTCAGGGCTTAGTGGTTGCGA--TCCA i rheMac3.chr19 I 986 C 0 s macFas5.chr19 55198128 306 + 59248254 AGAGGTGATGGCTCCTGGGAATCCTGCTCAGGGAGGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGACACCTCCCTCCCCTCTGACCACCACGGAGGGAGCACCTGCCCCAACCCTGGAGCACCAGGAAGCCACGCGGACCACACCCTTACTGTCCACCCTGCCCTCTGCTGCCCTG--AATCAGATCCCGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGACTTGGGAGTGGCTGGTTTTTTTTGTTACCCA-TGAGTCAGGACTTAGAGGTTGGGACCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305104 303 + 51301725 AGAGGTGATGGCTCTTGGGAATCCTGCTCGGGGAAGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGacacctccctcccctctgaCCACCACGGAGGGAGCACCTGCCCCATC-CTGGAGCACCAGGAAGCCACGCGGACCACACCCTTACCGTCCACCCTGCCCTCTGCTGCCCTG--AATCAGACCCTGAATATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGAGCTGGGAATGGC--TGTTTCTTTGTCACCCA-TGAGTCAGGACTTAGAGGTTGGGACCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46999522 307 + 50890351 AGAGGTGATGGCTCCTGGGAATCCTGCGCGGGGAGGGGGAAAGTCCCCGCTGCTCCACTCATCAATGCCGAACCTCAGACACCTCCCTCCCCTCTGACCACCACGGAGGGAGCACCTGCCCCAACCCTGGAGCACCGGGAAGCCACGCAGACCACACCCTTACTGTCCACCCTGCCCTCTGCTGCCCTGGAAATCAGACCCTGCTTATTGGAGGTAGCATTGAGATGAGTCTAGAAACTTCTCTTGACTTGGAAGTGGC--TGTTTTTTTGTCACCCATGGGGTCAGGACTTAGGGGTTGGGACCCCCA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3786784 9094 + 145441459 I e canFam3.chr1 19718733 25069 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I a score=495234.000000 s hg38.chr19_GL949753v2_alt 272739 229 + 796479 GAGGCTCAGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCTGTCTTCCACTCTCAGTCTAATCTCCTCTCCTCTGAGGTTCACC---CCCCGGCCCCGCCATCTCCTCC--CAGCCCTCCCTGCTCTTTAC-TCTACTGGGACTTCAGGGGTGGGAGCCAGGGGTGAGAGGTCCCTGTCGATTTCCACCCTCTCATGGTCTGGACCCTCCCCTGCAGACCCT-CC s panTro4.chr19 59226264 229 + 63644993 GAGGCTCCGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTTCCACTCTCAGTCTAATCTCATCTCCTCTGAGGTTCACC--TCCCCCTCCCCGCCGTCTCCTCC--CAGCCCTCCCTGCTCTTTAC-TCTACTGGGACTTC-GGGGTGGGAGCCCAGGGAGGGAGATCCCCATCTATTTCCACCCTCTCATGGTCTGGACCGTCCCCTGCAGACCCT-CC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054219 232 + 60714840 GAGGCTCCGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTTCCACCCTCAGTCCAGTCTCGTCTCCTTTGAGGTTCACCCCTCCTCCGCCCCGCCGTCTCCTCC--CTGACCTCCCTGCTCTTTAC-TCTACTGGGACTTCAGGGGTGGAAGCCAGGGGTGGGAGATCTCCATCTATTTCTACCCTCTCATGGGCTGGACCCTCCCCTGCAGACCCT-CC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838446 230 - 106955855 GAGGCTCTGATTCTGAGGTGGAGACATCAGGAGGGGAGCGGGTGGGGCCTCCGTCTCCCACCCTCAGTCTAATCTCGTCTCCTCTGAGGTTCACC---CCCCACCCCCGCCATCTCTTCC--CAGCCCTCCCTGCTCTTTAC-TCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAGATCCCCGTCTATTTCTACCCTCTCATGGGCTGGACCCTCCCCTGCAGACCCTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3752746 219 - 64156825 GACGCTCTGATTCTGAGGTGGAGACATCAGGAGGGGAGCATGTGGGTCCTCTGTCTTCCACCGTCGGTCTAATCTCATCTCCTCTGAGGTTCACC---C----------CCGTCTCCTCC--CAGCCCTCCCTGCTCTTTAC-CCTACTGAGAGTCCAGGGGTTGGAGCCAGGGGTGGGAGGTCCCGGCCTATTTCCACCCTCTCATGGACTGGACCCTCCCCTGCAGACCCT-CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55198434 218 + 59248254 GAGGCTCTGATTCTGAGGTGGAGACATCAGGAGGGGTGCGGGTGGGGCCTCCGTCTTCCACAGTCATTCTAATCTCATCTCCTCTGAGGTTCACC---C----------CCGTCTCCTCC--CAGCCCTCCCGACTCTTCAC-TCCACTGAGACTTCAGGGGTGGGAGCCAGGGGTGGGAGGTCGC-ATCTATTTCCACCCTCTCATGGGCTGGATCCTCCCCTGCGGACCCT-GC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305407 215 + 51301725 GAGGCTCTGAATCTGAGGTGGAGACACCAGGAGGGGAGTGTGTGGGGCCTCCATCTTCCACCCTCAGTCTAATCTCAT---CTCTGAGGTTCACC---C----------CCATCTCCTCC--CAGCCCTCCCTGCTCTTTAC-CCTACTGAGACTTCAGGGATGGGAGCCAGGGGTGGGAGGTCCC-GTCTATTTCCACCCTCTCATGGGCTGGACCCTCCGCTGCGGACCCT-CC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46999829 215 + 50890351 GAGGCTCTGATTCTGAGGTGGA-ACATCAGGAGGGGAGCGGGTGGGGCCTCTGTCTTCCACAGTCATTCTAATCTCATCTCCTCTGAGGTTCA-----C----------CCATCTCCTTC--CAGCCCTCCCGGCTCTTCAC-TCCACTGAGACTTCAGGGGTGGGAGCCAGGGGTGGGAGGTCCC-ATCTATTTCCACCCTCTCATGGGCTGGATCCTCCCCTGCGGACCCT-GC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19743802 195 - 122678785 GAGGCTC----TCTGATATGGAGGCACAAACAAAGGTTTGTGGGAGACCTGTGTCT----------ATTCAGGATCATCCTC------GCTCACC---C----------ACCTCTCATGCAGCAG-----CCTACTCCTTACTTCTGCTGAGACTGAAGAATGGGGGACCCCAGGTGGAGGCTGT--AGCTTTTTCCACTCTCTCCTGGGCTGGACCCTCCTCTGTGGAGCCT-CC i canFam3.chr1 I 25069 T 23913 e mm10.chr7 3786784 9094 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I a score=44748.000000 s hg38.chr19_GL949753v2_alt 272968 15 + 796479 CCCTTCACTCCCCTC s panTro4.chr19 59226493 15 + 63644993 CCCTTCACTCCCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054451 15 + 60714840 CCCTTCACTCCCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838676 15 - 106955855 CCCTTCACTCCCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3752965 15 - 64156825 CCGTTCACTCCCCtc i rheMac3.chr19 C 0 I 309 s macFas5.chr19 55198652 15 + 59248254 CCCTTCACTCCCCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305622 15 + 51301725 CCCTTCACTCCCCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000044 15 + 50890351 CCCTTCACTCCCCTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720084 15 - 122678785 CTCCTTAATTCCCTC i canFam3.chr1 T 23913 C 0 e mm10.chr7 3786784 9094 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I a score=18125.000000 s hg38.chr19_GL949753v2_alt 272983 13 + 796479 ATTCATTATTGTC s panTro4.chr19 59226508 13 + 63644993 ATTCATTCTTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054466 13 + 60714840 ATTCATTATTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838691 13 - 106955855 ATTTATTATTGTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55198667 13 + 59248254 CTTCATTATTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305637 13 + 51301725 TTTCATTATTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000059 13 + 50890351 CTTCATTATTGTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720099 12 - 122678785 TTCCATTCCAGC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3786784 9094 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3752980 309 - 64156825 I a score=108512.000000 s hg38.chr19_GL949753v2_alt 272996 42 + 796479 CCAGAGCTCTGCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAG s panTro4.chr19 59226521 42 + 63644993 CCAGAGCTCTGCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054479 42 + 60714840 CCAGAGTTCTGCTGGGGGTAGGGC-CTGAGCTGAGCCTTTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838704 41 - 106955855 CCAGAGCTCTCCT-GGGGCAGGGC-CTGAGCTGAGCCTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3753289 42 - 64156825 CCAGAGCTCTGCTGGGAGCAGGGC-CTTTGCTGAGCCTTTGAG i rheMac3.chr19 I 309 C 0 s macFas5.chr19 55198680 42 + 59248254 CCAGAGCTCTGCTGGGAGCAGGGC-CTGAGCTGAGCCTTTGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305650 42 + 51301725 CCAGAGCTCTGCCGGGGGCAGGGC-CTGAGCTGAGCCTTTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000072 42 + 50890351 CCAGAGCTCTGCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19720111 42 - 122678785 CCAGATCTCTGCA-AGGACAGGCCAATGACCCGAGCATCTTGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3786784 9094 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I a score=2658332.000000 s hg38.chr19_GL949753v2_alt 273038 957 + 796479 --CTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGCGGGGAATCAGCTGCCCCCTCCTTGGTCAAAAGGAAAGTGTGCATCCCTCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCCGCACGGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCC---------ACCTTGCTCTGAGCTGAG-----------ACCTCCCCAG-GCCTCTCCCTGGGACCCTCAGTCTCT--CTG--TCTCTGTTTTCTCTGAG-------------TCTCC----CC-TCCCCGCCCA--------CCCCTGTCACT---GTCTGTC-----TCTCCCTCCCTTAGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGG--------------CT---CCCCCAGCAGGGCCTTTGCGGAGCCTGGGTCCCTGACTGAACCCGCTGGGCTCCTCACCTGTGATCAGGATGTCCAGGGGGTCGCTGGGGGCCGACCACTCGGAGGAGAGGTTGTATGCACCGGAGCATGTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAACAAATCTG-----------------------------------------------------TCGTAGCCGGCATCAGAGCCACACTGGAAGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCT-GGGAAAAGGTGCTCATGGTTTCCAGGAG--------------CCGACCCTCAGGCTTCCCCACAA--ACTTTCCCTCTCCCCCGGGGCC s panTro4.chr19 59226563 956 + 63644993 --CTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGCGGGGAGTCAGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGTTCATCCCTCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCCGCACGGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCC---------ACCTTGTTCTGAGCTGAG-----------ACCTTCCCAG-GCCTCTCTCTGGGACCCTCAGTCTCTGGTTG--CCTCTGTTTTCCCTGAG-------------TCTCC----CCCTCCCCACCCA--------CCCCTGTC-------TCTGTC-----TCTCCCTCCCTTGGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGG--------------CT---CCCCCGGCAGGGCCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTTGCTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGAACAGAACAAATCTG-----------------------------------------------------TCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACAACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCT-GGGAAAAGGTGCTCATGGTTTCCAGGAG--------------CCGACCCTCAGGCTTCCCCACAA--ACCTTCCCTCTCCCCCAGGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56054521 944 + 60714840 --CTCGGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCATGAGCTCCAGGGGGCCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGATTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTTATGGGGAATTCAGCCTGGTACTTATGAGATTGGCACTTTGATTTTAGACGCAGCGGAGGATCAGCTGTCCCTTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGTCACTGTGGGGCCCGGCCTCACAGAGAGGGA-GGTCTGGCACGGATCTGTCCTAGAGAGAAGAAG------GATGGGTGAGGGGCTGCCCC---------ACCTTGTTCTGAGCTGAG-----------ACCTCCCCAG-GCCTCTCCCTGGGACCCTCAGTCTCT--CTG--TCTCTGTGTTCTCTGAG-------------TCTCC----CC-TCCCCGCCCA--------CCCCTGTC-------TCTGTC-----TCTCCCTCCCTTAGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGG--------------CT---ACCCCGGCAGGTCCTGTGCAGAGCCTGGGTCCCTGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCGCCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTGACAGGGCCCAGGGTGAAGTTGGCCTGGGAGATCCCAGCCTGGGGCTGCCAGCCAGGGCGCTGGAGGAAGTCACGCCCCCACTCCTTGTACAGAGCGAATCTG-----------------------------------------------------TCATAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTGGAAACACCT-GGGAAAAGGTGGTCATGGTTTCCAGGAG--------------CCGACCCTCAGGCTTCCTCACAA--ATCCTCCGT--------GGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102838745 958 - 106955855 --TTCAGAGAGGACAGGGTCGGTGCCCTCACCTGAGACCACGATCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACCCATGGGGAATTCAGCCTGGTACTTATGAGATTGGCGCTTTGATCTCAGACGCAGCAGGGGATCAGCTGTCCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCGTCCCTGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACTGTGGGGCCCGGCTGCACCAGGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGAAGAAG------GATGGATGAGGAGCTGCCCC---------ACCTTGTTCTGAGCTGAG-----------ACCTCCCCAG-GCCTCTCTCTGGGACCCTCAGTCTCT--CGG--TATCGGTTTTTTTGGAG-------------TCTCC----CCCGCCCCGCCCAT-------CCCCTGTCTCT---GTCTGTC-----TCTCCCTCCCTTGGGA-CCCCACCCCTCATCCCGGCCATCACTACCTGGG--------------CT---CCACCGGCAGGGCCTGTGCAGAGCCTGGGTCCCTGACTGAACCTGCTGGGCTCCTCACCTGTGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCGCCAGAGCATCTGTACTGGCCCCCATAAGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGTGAATCTG-----------------------------------------------------TCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACGCCT-GGGAAAAGGTGGTCATGGTTTCCAGGAG--------------CCGACCCTCAGGCTTCCCCACAA--ACCCTCCCTCTCCCCCGGGGCC i nomLeu3.chr10 C 0 I 290 s rheMac3.chr19 3753331 1007 - 64156825 --CTTAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGACTCACTGGGGTGAGTCAGCAGGTGGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCTGCATGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTTGGGATATTTGTGCATTGATCTTAGATGGAGGTGGGCATCAGCTGCTCCCGCCTGTGTCAGAAGGAAAGCGTGGAACTGCCACGAGGACTGACAGAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGGGCCCGGCTGCACCGAGAGGAAGGATCTGTCGGGGATCTGTCCTGGAGAGAAAAGG------GATGGATGAGGGGCTGCCCC---------AACTTGCTCTGAGCTGAT-----------ACCTCCCTAG-GCCTCTCTCTAGGACCCTCAGTCTCT--CTG----TCTGTTTTCTCTGAG-------------TCTTC----CCTTCTC--CCCAT-------TCCCTGTGTCT---GTCTGTC-----TCTCTCTCCCTTGGGACCCCCACCCCTCATCCCGGCCATCACCACCTGGG--------------CT---CCCCCAGAAAGGCCTGAACAGAGCCTGGGTCCCTGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGGCACTGGGGGCCGACCACTGGGAGGAGAGGTTGTGTGCACTGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGAGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAGGTCACCTTCTCCCTCCTTGTATAGAACAAATCTGAGCCAGGGCGCTGGAGGAAGTCACATGCCCCCTCCTTATACAGAGAGAATCTATCATAGCCAGCATCAGAGCCACACTGGAGGGTCAGACTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTTAGAAACACCT-GGGAAAAGGTGGTCACAGTTTCTAGGAG---------------CGACCCTCAGGCTTCCCCACAA--ACCCTCCCTCTCCCCCTGGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55198722 955 + 59248254 --TTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTAGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCATGGGCTGAGGTCACAGGACTTATGGGGAATTCAGTCTGGTACTTATGAGATTGGCGCTTTGATTTTAGACGCAGGGGGGGATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCACGGATCTGTCCTGGAGAGGGGAAG------GATGGATGAGGGGCTGCCCC---------ACCTTGTTCTGAGCTGAT-----------ACCTCCC-AG-GCCTCTCTCTGGAACCCTTAGtctct--ctg----tctgttttctctgag-------------tctcc----ccctctctgcccat-------cgcctgtctct---gtctgtc-----tctctctccctTGGGACCCCCACACCTCGTCCCAGCCATCACCATCTTGG--------------CT---CCCCCAGCAGGGCCTGTGCAGAGCGTGGGTCCCTGACTGAACCCACTGGGCTCCTCACCTGAGATCAGGATGTCCAGGGGATCACTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGAGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCAAATCTG-----------------------------------------------------TTGTAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGACAGTGACGGCTTCTTAGAAACACCT-GGGAAAAGGTGGTCACGGTTTCCAGGAG---------------CGACCCTCAGGCTTCCCCACAA--ACCCTCCCTCTCCCCCTGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47305692 952 + 51301725 --TTCAGAGGGGACAGGGTCAGGGCCCTCACCTGAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTTATGAGACCGGCGCTTTGATTTCAGACGCAGGGGGGCATCAGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCACGAATCTGTCCTGGAGAG---AAG------GATGGATGAGGAGCTGCCCC---------GCCTTGTTCTCAGCTGAC-----------ACCTCCC-AG-GCctctctctggaaccctcagtctct--ctg----tctgttttctctgag-------------tctcc----ccctctctgcccat-------cgcctgtctct---ctctgtc-----tctctctcccttgggACCCCCACACCTCATCCCAGCCATCACCATCTTGG--------------CT---CCCCCAGCAGGGCCTGTGCAGAGCGTGGGTCCCTGACTGAACCCGCTGGGTTCCTCACCTGAGATCAGGATGTCCAGGGGGTCACTGGGGGCCGACCACTCGGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCGAATCTG-----------------------------------------------------TTGTAGCCGGCATCAGAGCCACACTGGAGGGTCAGCTTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGACAGTGACGGCTTCTTAGAAACACCT-GGGAAAAGGTGGTCACGGTTTCCAGGAG---------------CGACCCTCAGGCTTCCCCACaa--accctccctctccccctgggCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47000114 954 + 50890351 --TTCAGAGAGGACAGGGTCAGGGCCCTCACCTGAGACCATGAGCTCCAGGGGGTCACTGGGGTGAGTCAGCAGGTAGGGGTTGGAGCTGAGGGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGAAATTCAGCCTGGTACTTATGAGATTGGCGTTTTGATTTTAGACGCAGGGGGGGATCGGCTGCTCCCTCCTTGGTCAGAAGGAAAGTGTGCATCCACCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACCGTGGAGCCCGGCTGCACTGAGAGGAAGGGTCTGGCGTGGATCTGTCCTGGAGAGAAGAAG------GATTGATGAGGGGCTGCCCT---------ACTTTGTTCTGAGCCGAT-----------ACCTCCC-AG-GCCTCTCTCTGGAACCCTTAGtctct--ctg----tctgttttctctgag-------------tctcc----ccctctctgcccat-------c-cctgtctct---aactgtc-----tctctctccctTGGGACCCCCACACCTCGTCCCAGCCATCACCATCTTGG--------------CT---CCCCCAGCAGGGCCTGTGCAGAGCCTGGGTCCCTGACTGAACCTGCTGGGTTCCTCACCTGAGATCAGGATGTCCAGGGGGTCGCTGGGGGCCGACCACTCAGAGGAGAGGTTGTGTGCACCGGAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCCCAGGGGGAAGTTGGCCTGGGAAAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGAGGAAGTCACGTCCCCACTCCTTGTACAGAGCAAATCTG-----------------------------------------------------TTGTAGCCGGCATCAGAGCCACACTGGAGGATTAGCTTCTCCCCAGGGGCCACAACAGGACCCGGCTGCACTGAGAGTGACGGCTTCTTAGAAACACCT-GGGAAAAGGTGGTCACGGTTTCCAGGAG---------------CGACCCTCAGGCTTCCCCACAA--ACCCTCCCTCTCCCCCTGGGCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3795878 933 + 145441459 --CTCTGACATGTCAGGATCA----CCTCACCTGAGACTGTGAGCTCCACAGGGGAACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTTGATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCTCCTTGGACAGAATGAAAGTATCCACAGAGTCCATTGACCAACACAGCAGGCTCACGGTCTCTCCTGAGTGCACTGTGTGGTTAGGCTGCACTGAGAGGGAAGGAGTGAGAGGGAGCTGTCCTAAAGAGAAGAGG------CAT-GATGAGAGGCTAGCTT----------CCTTGTTCTGAGCTCCA-----------ATCACACATG-ACTCCACCCTGAGAACCTGGGCCTCT----G----TCTCTTTTCTCTGA---------------------------CTGAGCTCAA-------CTCCTGTTCTC---ATCTTCTTGTGATCAATCCTGCTTAGGATTCCTGTATC-CATGCTGGCCATAAGCTCCCCAG--------------CC---CCCCCATTAGAGCCTGAGCAGAGGCTAGGTTCCTGACTGAGTCTGTTGAGTTCCTCACCTGTGATCAGGATGTCCAGGGGGTCACTGGAGGCTGACCACTCAGAGGAAAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACTCACATAGCCCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCTCCCCACCTTGTGCAGAGCAAATCTG-----------------------------------------------------TCATAGTTGATGTCAGAGAAACACTGCAGTGTGAGGGTCATTCCAGGGTCCAGGATATGGCCTTGGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTG---ACAG---CTAGAGA--------------CTGAGGTTTGGTTCTTACCAAAC--ACCTTTGCCCTCCCCTC----- i mm10.chr7 I 9094 C 0 s canFam3.chr1 19720153 1008 - 122678785 CCATCAAAGGACAAATGAGTGGACCTCTCACCTGAGACAAGGAGCTCCAGGGAGTCACTGGGACTTGACAACAGGTAGGGGGAGGAGTTGTGTGAGCTGTAGCACCTGTAGGTCCCCTGGTGGTCTGAGGTCACAGGATTCAGGGTGAAGTTGACCTCATACGGTATAGCTGTATCCTGCAGATGAAGGTGCTGGGGAGGAGCAAGGGACCCCTCCTTGGACAGGTGGAAGGTATTGAACCAGATCTCAGAGCGACACTGCAGGGTCACATTCTCTCCCCAGGATACTGAAGGCCCAGGCTGGGCTGAGAGGGATGGTTTTGGGTATAT---TCCTGGGGAAAAGGAAGGTCGTGATGTGTAGAGGCCTGCCTCTCCACATATGCCCTTGACCCAGCTGGGGGACCACCTTCGTCTCTCCAGAGACTCTGTGTGGGACCC----CCTCT--CAGCTCCTCTTGTCTCTCTGAGTGGATGTCCTTCATCTCCATGACCCTCACCGGCCATTTTTCAGCCCCTGTCCCTAGAACATGGC-----CCCATCTCAGCCTGTGCTCCTGACCCTCTCCCCGGACCCCATCACCCAGGGGTGACAGTGGCCCCTGAGCCTTCAGCAG-------ACAGGACATGGGGC-------------AGGGGGCTTCTCACCTGTGATCAGGATGTCCAGAGGGGCACTGGGTGCTGACCACGTGGAGGAGAGGTTGTGTCCACTGTAGCACCTGTACCGGCCCCCGTGGGTGCGGCTCACAGGGTCCAGGGGGAAGTCGG--------------GGCTGGGTTGACCATCCAGA-TGCTGGGCAGGTCTGAGCTCCTCATCCTTGGTCAGAGCGAATCTA-----------------------------------------------------TCAAAGCCAGCTTCTGAGTGACACTGCAGGGTCAGGTTGTCTCCAGAATGAACCAATGAGCCTGGCTGAGCTGAGAGGGAGGGCTCCCTGTAGGCACCT-GCATGGAAGGGCACAGTGACACTGAGGGGACCCAGACCCACATTGGGCCCAAGGCCTACATGAAGCTATCGTGGGTCCCTCCCAAAGCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I a score=125060.000000 s hg38.chr19_GL949753v2_alt 273995 50 + 796479 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT s panTro4.chr19 59227519 50 + 63644993 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055465 50 + 60714840 TCATCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102839993 50 - 106955855 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT i nomLeu3.chr10 I 290 C 0 s rheMac3.chr19 3754338 50 - 64156825 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55199677 50 + 59248254 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306644 50 + 51301725 TCACCACTGCTGATCTTCCTGTGTCT------------CTGGCCCCAGGAGCCCTGAGCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47001068 50 + 50890351 TCACCACTGCTGATCTTCCTGTGTCT------------CTGACCCCAGGAGCCCTGAGTCCT i chlSab2.chr6 C 0 T 20516 s mm10.chr7 3796811 59 + 145441459 CTGCCTTTGTGTATGTCCCCTCTTCTCCCCAATCAGGGCTGTTTTCGAGAACACAGGCT--- i mm10.chr7 C 0 C 0 s canFam3.chr1 19721161 34 - 122678785 ------------TCCAACCTGTAGTT------------CTGGCCCTAGGAGGCCAGTG---- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I a score=1208852.000000 s hg38.chr19_GL949753v2_alt 274045 598 + 796479 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAG-ACGC-GGCTC---CTCCCCACCTG---CCTGGAGACTCAGGGAGACTCAGGGAAC-CCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCCCCAGGAGATCACTGGGTAGAGACCACACATAGGGAGCGCGCGAGTCATAACCATAGCACCTGTACGACCACCTGCGACTTGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCACGGGCATGGGAATGGGAGTT-CAGGCATTGTG--------GGTGTTCATCTTCT--CCTTCCTTACACAGAATGAAGCCATCAAATGCCACCTGTGAGTCACACTGGATGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTT------GCTGTAGGCTCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGGCTCAGACCTCCCGCGTCATCCCCAGG---GCTGGGCTGTGAGAGGGAGAAGCCCCTGAGAGCTGACCCCCTTCCTGAGGGCGGAGCCTGGGGCTGGGATCCCTGAGTGTC-------------AGCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGCTCTCTGA s panTro4.chr19 59227569 598 + 63644993 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAG-ACGT-GGCTC---CTCCCCACCTG---CCTGGAGACTCAGGGAGACTCAGGGAAT-TCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAGAGACCACACATAGGGAGCATGCGAGTCATAACCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCACGGGCATGGGAATGGGAGTT-CAGGCATTGTG--------GGTGTTCATATTCT--CCTTCCTTACACAGAATGAAGCCATCAAATGCCACCTGTGAGTCACACTGGAGGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT------GCTGTAGGCTCCTAGGAGAGAAGGAGGCA-CCGTGTTGAATGGGGCTCAGACCTCCCGCGTCATCCCCAGG---GCTGGGCTGTGAAAGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGATCCCTGAGTGTC-------------AGCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGCTCTCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56055515 598 + 60714840 CTCGCCCCAACATCATCCCACCTGGAGCTGCCCTGAG-ACGC-GGCTC---CTCCCCACCTG---CCTGGAGACTCAGGGAAACTCAGGGAAC-TCCAGACAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGTGCGAGTCATAACCATAGCACCTGTACGACCATCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCAGGACGACCCATGGTTACGGGGCTGAGAGTT-CAGGCATTGTG--------GGTGTTCATCTTCT--CCTTCCTTACACAGAATGAAGCCGTCAAATGCCAGCTGTGAGACACACTGGAGGGTCACATTCCCTCCTGAGGTCACCACAGGGCTGGGCAGAGCTGAGAGGGTGGGTTT------GCTGTAGAATCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGGCTCAGACCTCTCGCGTCATCCCCAGG---GCTGGGTTGTGAGAGGGAGATGCCCCTGAGAGCCGACCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTTTCACTTGTCACCACCAGCTTCAGGGGGTCACTGCTCTCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840043 588 - 106955855 CTCGCCCCAACATCATCCCCCCTGGAGCTGCCCTGAG-AGGC-GGCTC---CTCCCCACCTG---CCTGGAG----------ACTCAGGGAAC-TCCAGGCAATGCTGTGAATGTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGGAGAGCGCGAGTCATAAGCATAGCACCTGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGACGGCCCAGGACCACCCACGGGTACGGGGCTGGGAGTT-CAGGCATTGTG--------GGTGTTCATCTTCT--CCTTCCTTACACAGAATGAAGCCGTCAAATGCCAGCTGTGAGCCACACTGCAGGGTCACATTCTCTCCTGAGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT------GCTGTGGGCTCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGGCTCCCACCTCCCACATCATCCCCAGG---GCTGGGCTGTGAGAGGCAGACGCCCCTGAGAGCCGATCCCCTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGAGCTCTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3754388 575 - 64156825 CTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAG-ACGC-GGCTC---CTCCCCACCTG---CCCGGAG----------ACTCAGGGAGC-TCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGCGTGAGTCATAACCATAGCACCGGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGACAGCCCGGGG------------ATGGAAGTGGGAGTT-CAGGCATTGTG--------GGTGTTCATCTTCT--CCTTCCTTACACAGAATGTAGTTATCAAATGCCACCCGTGAGCCACACTGGAGAGTCACATTCCATCCTGAGGCCACCACAGGGCTGAGCAGGGCTGAGAGGGTGGGTTT------GCTGTAGGCTCCTGGGAGAGAAGGAGGCA-CCGTGTTAAATGGG-CTCCCACCTCCCGCATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGA i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55199727 588 + 59248254 CTCGTCCCAACATCATCCCACCTGGCGCTGCCCTGAG-ACGC-GGCTC---CTCCCCACCTG---CCTGGAG----------ACTCAGGGAAC-TCCAGGCAATGCTGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGCGTGAGTCATAACCATAGCACCGGTACGACCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGACGGCCCGGGATGACCCACGGGTACGGGGCTGGGAGTT-CAGGCATTGTG--------GGTGCTCATCTTCT--CCTTCCTTACACAGAATGAAGCCGTCAAATGCCACCCGTGAGTCACACTGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTT------TCTGTAGGCTCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGGACTCACACCTCCCGCATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47306694 587 + 51301725 CTCATCCCAACATCATCCCACCTGGCGCTGCCCTGAG-ACGC-GGCTC---CTCCCCACCTG---CCCGGAG----------ACTCAGGGAAC-TCCAGACAATGATGTGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTAAAGACCACACATAGGGAGAGCGTGAGTCATAACCATAGCACCGGTACAACCACCTGCGACTTGGGCTCACGGGGCCCACGGAGAAGACAGCCCGGGATGACCCACGGGTACGGGGCTGGGAGAT-CAGGCATTGTG--------GGTGTTCATCTTCT--CCTTCCTTACACAGAATGAAGCCGTCAAATGCCACCCGTGAGTCACACTGGAGGGTCACGTTCCCTCCTGAGGCCAccacagggctgggcagggctgagaGGGTGGGTTT------TCTGTAGGCTCCTAGGAGAGAAGGAGGCA-CCGTGTTAAATGGG-CTCCCACCTCCCGCATCATCCCCAGG---GCTGGGCTGTGAGAGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGAGGACAGAGCCTGGGGCTGGGACCCCTGAGTGTC-------------CTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGCGCTCTGA i papAnu2.chr19 C 0 C 0 s mm10.chr7 3796870 573 + 145441459 CTCCATTTTAAGTTTCTCTACCTGCAACTCAGCAGAG-GGGCAGGCCT---ATGGCAAAGGG---CTTAGGG----------TCTCAGAAAATGTTTGGAGAATGATAGTGAGGACTTACCTGAGATGAGTATTTGTTGGAGAGCACTAGGTACTGACCACAGCTGTGGGGCATTCTTGTAGTAACCGTAACATCTGAATGCCCCTGTATGGGTTGGGGTTGTGGGTCCTATAATAAACAGGGCTCTGTACTGTCTAC-----------TAGAAGATATATGCTCTGTGTCCAGTGAGCTGGTAAATTTCTTATCTTCCTTCGTGAGAATGAATTTATCATAGTCACCGTGTGAGGCACAGTGGAGTGTCATGTTTCCTCCTGCTGTCACCACAGGGCTGGGCAGTACTGACAACCTGGGTTTATAATATTCATAGATTCCTAGGAGAGAAGGAGGAC-GTCTTTTACATGTT-CTCACACTGTCCCAGTGTTCTCTTGG---GATACTCTGTGGGAAGGGAGTTCTATTGAGAG-------------------CAGAGCCTGGGGTTGATATCC---ACTGTC-------------CCCTCACCTGTCACCACCAGCTCCAGGGTGTCACTGGGCTGTGA i mm10.chr7 C 0 C 0 s canFam3.chr1 19721195 590 - 122678785 -TCACCCACCCTGCATCACTCCCAGGGCTCTATTGGGCATAT-GGCTTAGGTTAGTCATATGGGCCCAGGAG--------AAAGATGGGGTGC-AGCAGGGACTGC---------CTCACCTGTGACCTGAAGGTGCAGGGGGTCACTGGGGTGTGACCATGAATACGGGTACGACTGTTGAGAAATGTAGCATCTGTAGGTGCCCCCATGGGAGGTGTTCACAGGGCCCACAGGGAAGAGTGCCCGGTACCTCTCACG---AAGGATCGTCAAATC-CAGGTGTTGGG--------GCACATCAGCTCCC--TGCTCCTTCAGCAGATGGAATGAGTACCATGGGTAACGTGAACTACAGGAGAGGGACATGTTCACTCCTGAGGCCACCACAGGGCCTGGGTTAACTGAGAGGGTGGGTGC------CCCAAATACTCCTGAGAGAGAAGGAGGGAGCTATGTTACAGCGGGCAGTCAACCCATGTA----CTCCATGTACTCTGTGCTGTGAGCAAGGGGT-CCCCTGAGACCACATTCCATTCTC-----TTCAGCCTGGAGGAGGGGCCCCAGAG-GTCGGGTCAGCACCTGCCCTTACCTGTCACCACCAGGGTCAGGAGGTCACTCCGCTGTGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=9461.000000 s hg38.chr19_GL949753v2_alt 274643 11 + 796479 GAGGCCTGCAG s panTro4.chr19 59228167 11 + 63644993 GCGGCCTGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056113 11 + 60714840 CCGGCCTGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840631 11 - 106955855 CCAGCCTGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55200315 11 + 59248254 CCAGCCTGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307281 11 + 51301725 CCAGCCTGCCA i papAnu2.chr19 C 0 C 0 s mm10.chr7 3797443 11 + 145441459 CCAACCAGCTG i mm10.chr7 C 0 C 0 s canFam3.chr1 19721785 8 - 122678785 CCAGCTCT--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T e rheMac3.chr19 3754963 8 - 64156825 I a score=515361.000000 s hg38.chr19_GL949753v2_alt 274654 258 + 796479 TGTGGCTGCCATAGATACAGCAATACCGCCCTGCATGTTCCCAGGTGATGGATAGGATGG-GGAAC-------------------------------------------------------TGGCCCTTCTTCACAAGCTCCTGTGGGA--TCCGTGTA-----ATCCAGAGTGCTGTTTTCTTTTCTCTATATAGATGGTACTCCTGCGTCTCCAGGCTCCCCTGACACCTGAGGGTCACAGGACTCCCTTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGG-------------------------------GTGGGCTTGGGGAGGGGCCCTGGAAGGAAATCAGAGT- s panTro4.chr19 59228178 258 + 63644993 TGTGGCTGCCATAGATACAGCAATACCGCCCTGCATGTTCCCAGGTGATGGATGGGATGG-GGAAC-------------------------------------------------------TGGCCCTTCTTCACAAGCTCCTGTGGGA--TCCGTGTA-----ATCCAGAGTGCTGTTTTCTTTTCTCTATATAGATGGTACTCCTGCGTCTCCAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGG-------------------------------GTGGGCTTGGGGAGGGGCCCTGGAAGGAAATCAGAGT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056124 256 + 60714840 TGTGGCTACCATAGATACAGCGATAATGCCCTGCATGTTCCAAGTTGATGGACGGGATGG-GGG---------------------------------------------------------CTGCCTTTCTTCACAAGACCCTGTGGGA--TCCGTGTA-----ATCCAGGGTGCTGTTTTCTTTTCTCTATATAGACAGTACTCCTGGACCTCCAGGCTCCCCTGACACCTGAGGGTCATGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGG-------------------------------GTGGGCTTGGGGAGGATCCCTGGAAGGAAATCAGAGT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840642 258 - 106955855 TGTGGCTACCGTAGAAACAGCGATACCGCCCTGCGTGTTCCCAGGTGACGGATGGGATGG-GGAAC-------------------------------------------------------TGGCCCTTCTTCACAAGCTCTTGTGGCA--TCTGTGTA-----ATCCAGGGTGCTGTTTTTTTCTCTATATATAGACGGTACTCCTGGGTCTCCAGGCTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGCCTGGCTCAGCCCAGAGG-------------------------------GTGGGCTTGGGGAGGAGCCCTGGAAGGAAATCAGAGT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3754971 345 - 64156825 TGTGGCTGTAATACTGACAGCGATACCGCCCTGTGTGTTCCCAGGCGATGGATGCAATGGCGAAATAGCCCTTCTTGACAAGTGCCCTGTGTGTTCCCAGGTGATGAATCCAATGGCGAAATAGCCCTTCTTGACAAGCTCTTGTCGTA--TCCGTCTA-----ACCCAGGATGCTGTTTTTTTTTCCCTTTGTAGACGGTAGTCCTGAACCTGAAGGCTCCCCTGACACCTGAGGGTCACGGGACTTCCCTCGCTGATCACAGACCCTGGCTCAGCCCAGAGGGTGGATCATAGACCCTGGCTCAGCCCAGAGAGTGGGCTTGGGAAAGGTCCCTGGAAGAAAATCAGAGA- i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55200326 258 + 59248254 TGTGGTTACCATAGATACAGCGATACCGCCCTGCGTGCTCCCAGGTGGTGGATGGGATGG-GAAAC-------------------------------------------------------TGGCCCTTCTTCACAAGCTCCTGTGGGA--TCCGTGTA-----ATCCAGGGTGCTGTTTTTTCTTCTCTATATAGACGGTACTCCTGGGTCTCCAGGCTCCCCTGACACCTGAGGGTCATGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGG-------------------------------GTGGGTTTGGGGAGGGTGCCTGGAAGGAAATCAGAGT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307292 258 + 51301725 TGTGGCTACCATAGATACAGCGATACCGCCCTGCGTGCTCCCAGGTGGTGGATGGGATGG-GGAAC-------------------------------------------------------TGGCCCTTCTTCACAAGCTCCTGTGGGA--TCCGTGTA-----ATCCAGGGTgctgttttttcttctctatatagACGGTACTCCTGGGTCTCCAGGGTCCCCTGACACCTGAGGGTCACGGGACTCCCCTGGGTGATCACAGAGTCTGGCTCAGCCCAGAGG-------------------------------GTGGGTTTGGGGAGGGTGCCTGGAAGGAAATCAGAGT- i papAnu2.chr19 C 0 C 0 s mm10.chr7 3797454 255 + 145441459 ---AGCCATAACAATAACAGCGATATTGCCCTGCATGTTGTTGTGTCACAGAAGGGATGA-AGAAC-------------------------------------------------------TTGCCCTTGTTCCCAGGCTGCTGTAGGG--TCTGTGTG-----ATTTGTGGTTTTTGGCTTCCCTCATTATGCAGAAAATACACTTCTGCATCCAGGTTCCCCTGACACCAGATGGTCATTGCTCTTTCGGAGGTGATCACAGAGCTTGGTTCAGCCTTGATG-------------------------------GTTGGTTTTTGGAGATTACCTACATAGAAGTCAGAGT- i mm10.chr7 C 0 I 71094 s canFam3.chr1 19721793 259 - 122678785 TCCTGCTCTGATATGCACACTGGTATCGCCCTGCCTCATGTGCGCTCATGGATTCAATGG-AGTAA-------------------------------------------------------CTGGCTTTGGTTTTGGAATCCTGGGAGATCTCCATGTAAAAATACCCAGAG-------ACCCTCTCTTTAAACAGATAGTAAGCATCAGCCTGCAGAGACGTCTGACACCAGAGGGTCACAGAGCTCCCCTTGGTGGCCATGAGGCCTGGGTCAGCCCAGATA-------------------------------GAGGGCTTGGGGAGGGTCCCTGGAAAGGAATCAGATGC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=39586.000000 s hg38.chr19_GL949753v2_alt 274912 27 + 796479 TCAGATTCTAAGTCAT--TTCCC-----ACCCAA s panTro4.chr19 59228436 27 + 63644993 TCAGATTCTAAGTCAT--TTCCC-----ACCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056380 27 + 60714840 TCAGATTCTAAGTCAT--TTCCC-----ACCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840900 32 - 106955855 TCAGATTCTAAGTCAT--TTCCCACCCAACCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3755316 27 - 64156825 TCGGATTCTAAGTCAT--TTCCC-----ACCCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55200584 32 + 59248254 TCAGATTCTAAGTCAT--TTCCTACCCAACCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307550 32 + 51301725 TCAGATTCTAAGTCAT--TTCCTACCCAACCCAA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19722052 27 - 122678785 ATAGTTGCAAGGGTGCCATTCAC-----GCCT-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3797709 71094 + 145441459 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=1056464.000000 s hg38.chr19_GL949753v2_alt 274939 548 + 796479 CAGATCTCAGCTCTCAGCTGCAGGACCCTCCAGACACCCCCATCAGTCAGCCCAGAACTGCTATTCCCCATCCCCAGCTGCACAGGGGTGGCCCCTTGTCCCCGGTGAGGAGGAGGGACTT--GGGACAGCTAGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGGCTCAGCCCTGGAAGAGAGTTCCCTATGAGGA-------------------ATTTGCCCCTGAAGCCTGAGCAGGTCCTC----------------------------------CCCTCCCTGGGATCTTTGTGAGCC-----------------CCTGGGGTCTCCTTAGGGACAAGAGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAAGCT-CCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGACCGTGAGGAT---GGGGGTCATGGCGTCTCCTCCCACTG--CACTGCTCTGTG---GATGGAT----GAGCCCTCGG----TGCTGGCAGGACAGAG-GACACACAGGGTGTGGACACTTGGAGGCTCGGTCCTTCTTC--TCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCT-CCCAGGAGCCTGGCTGTCTTTCC s panTro4.chr19 59228463 548 + 63644993 CAGATCTTAGCTCTCAGCTGCAGGACCCTCCAGACACCCCCATCAGTCAGCCCAGAACTGCTATTCCCCATCCCCAGCTGCACAGGGGTGGCCCCTTGTCCCCGGTGAGGAGGAGGGACTT--GGGACAGCTAGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGGCTCAGCCCTGGAAGAGAGTTCCCTATGAGGA-------------------ATTTGCCCCTGAAGCCTGGGCAGGTCCTC----------------------------------CCCTCCCTGGGATCTTTGTGAGCC-----------------CCTGGGGTCTCCTTAGGGACCAGAGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAAGCT-CCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGACCGTGAGGAT---GGGGGTCATGGCGTCTCCTCCCACTG--CACTGCTCTGTG---GATGGAT----GAGCCCTCGG----TGCTGGCAGGACAGAG-GACACACAGGGTGTGGACACTTGGAGGCTGGGTCCTTCTTC--TCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCT-CCCAGGACCCTGGCTGTCTTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056407 550 + 60714840 CAGAGCTCAGCTCTCAGCCTCAGGACCCTGCAGACACCCCCATCAGTCAGCCCTGAACTGCTATTCCCCGTCCCCAGCTGCACAGGGGTGGCTCCTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGTCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGG-------------------ATTTGCCCCTAAAGTCTGAGCAGATCCTC----------------------------------CCCTCCTTGGGATCTTTGTGAGCC-----------------CCTGGGGTCTCCTTAGGGACAAGAGTTTGGCTGTGGGGTGAGGTCCCTTCTAG--GTTAGAAGCTCCCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGACCACGAGGAT---GGGTGTCATGGCGTCTCCTCCCACTG--CCCTGCTCTGCA---GATGGAT----GAGCCCTCGG----TGTTGGCAGGACAGAGAGACACACAGGGTGTGGACACTCAGAGGCTGGGTCCTTCTTC--TCATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCT-CCCAGGAGCCTGGCTCTCTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102840932 548 - 106955855 CAGATTCCAGCTCTCAGCC-CAGGACCCTCCAGACGCCCCAGTCAGTCAGCCCAGAACCGCTATTCCCCATCCCTAGCTGCACGGAGGTGGCCCCTTGTCCCCAGTGAGGAGGAGGGACCT--GGGAGAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGCGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGG-------------------ATTCGCCCCTGAAGCCTGGGCAGGCCCTC----------------------------------CCCTCCCTGGGATCTTTGTGAGCC-----------------CCTGGGGT-TCCTTAGGGATCAGAGTTTGGCTGTGGGGTGAGGTCCCTCCTAG--GTTAGAAGCT-CCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGACCGTGAGGAT---GGGGGTCATGGCGTCTCCTCCCACTG--CCCTGCTCTGCA---GATGGAT----GAGCCGTCGG----TGCTGGTGGGACAGAGAGACACACAGGGTGTGGACACTCGGAGGCTGGGTCCTTCTTG--TAATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCTCCCCAGGAGCCTGGCTCTCTTTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3755343 551 - 64156825 CATATCTTAGCTCTTGGCTGCAGGACCCTCCACACGCCCCCATCAGTCAGCCCAGATCTGCTATTCCCCATCCCCAGCTGCACGGAGGTGGCGCCTTGTCCCCAGGGAGGAGGAGGGAACT--GGGACAGCCGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCCCTGAAGCCTGAGCAGGTCCTC----------------------------------CCCTCCCTGGGATCTTTGTGATCC-----------------CCTGGGGTCTCCTTATGCGCCAGAGTTTGGCTGTGGGGTGAGGGCCCTTCTAG--GTTAGAATTAAACCTGGGTCTTC---AAATCTCACCGAGACAGATCAGGAGCGTGAGGAT---GGGGGTCATGGCGTCTCCTCCCACTG--CCCTGCTCTGCG---GATGGTT----GAGCCCCCGG----TGCTGGCAGGACAGAGAGACACACAGGGTGTGGACACTCAGAGTCTGGGTCATTCTTC--TCATGGAGTTTTGTCATCTGCAGACACACAGGAAGTGGAACTGCCCTTCCCAGGAGCCTGGCTCTCATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55200616 543 + 59248254 CAGATTCCAGCTCCCAG-TCCAGGACCCTCCAGATGCCCCCATCAGTCAGGCCAGATCTGCTATTCCCCGTCCCCAGCTGCACGGGGGTGGCCCCTTGTCCCCAGTGAGGAGAAGGGACCT--GGGACATCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTCCGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCCCTGAAACCTGAGCAGGTCCTC----------------------------------CCCTCCCTGGGATCTTTGTGAGCC-----------------CCTGGGGTCTCCTTATGCACCAGAGTTTGGCTGTGCGGTGAGGTCCCTCCTAG--GTTAGAATCTCCCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGAGCGTGAGGAT---GGGGGTCATGGCGTCTCGTCCCACTG--CCCTGCTCTGCA---GATGGAT----GAGCCCTCGG----TGCTGGCAGGACAGAG----ACATGGGGTGTGGCCACTCGGAGGCTGGGTC---CTTC--TTATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCTCCCCTGGAACCTGGCTGTCATTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47307582 543 + 51301725 CAGATTCCAGCTCCCAG-TCCAGGACCCTCCAGATGCCCCCATCAGTCAGCCCAGATCTGCTATTCCCTGTCCCCAGCTGCACGGGGGTGGCCCCTTGTCCCCAGTGAGGAGAAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGAGGTCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAG-------------------ATTTGCCCCTGAAGCCTGAGCAGGTCCTC----------------------------------CCCTCCCTGGGATCTTTGTGAGCC-----------------CCTGGGGTCTCCTTATGCACTAGAGTTTGGCTGTGAGGTGAGGCCCCTCCTAG--GTTAGAATCTCCCCTCCCTCTTC---AAATCTCACCGAGACAGATCAGGACCGTGAGGAT---GGGGGTCATGGCGTCTCCTCCCACTG--CCCTGCTCTGCA---GATGGAT----GAGCCCTCGG----TGCTGGCAGGACAGAG----ACACAGGGTGTGGCCACTCGGAGGCTGGGTC---CTTC--TTATGGGGTTTTGTCATCTGCAGCCACACAGGAAGTGGAACTGCCCTCCCCAGGAACCTGGCTGTCATTCC i papAnu2.chr19 C 0 C 0 s mm10.chr7 3868803 540 + 145441459 CAGATTGCAGTCCTTAACCCCATGACCTTTCCGCCACCCACAGGACT-ATCACACAGGTGGTGTTTTCCACCATCA-CAGCCCAGGCATAGCTCCTGGAT----ATGAAGAAAAGAGCATTTCAGGTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGAGGCTCAGAGTCAGTCCTGGAAGAGAGTCCTTTGTAAGAG-------------------ATTTGTCCCT-AAGGCTGAGGAAGTCTGC-------------------------------------------AGAAACATCTGAGAC-----------------CCTGGGGTTTCCTTTTGGGTGAGTGCTGGTCTACAGGCCATGATCATTTCCAGACATCAGTATCCCCTCCCCCTCTTC---ACATCTCACCAAGACAGAGCAGGGCTGTGAAGGTGCAGGAGGACATGGCAACTCCCCTCATTG--GCTGCAACTGTGCTTGAGGGCA----GAGCTACAGAGCCTTTCTGAAGGGATTGGG-----TACAGGGTGTGG-CACT-GGAGGCAGGGCAGTCCCCA--TGACATGGTCATAT-ATCAGCAGCCCCACAGAAAGAGGAACTGCCCTCCTCAGGACCAT-GCTCTGACTTC i mm10.chr7 I 71094 C 0 s canFam3.chr1 19722079 582 - 122678785 TATTTTTCCCCCTGCTACCCCAAGGCCC------CTCCCACACTGGTCATCAT-CATCCTTGACGCTCTGCCCCTAGCTGTCCTGGGGTT--------------ATGGGCAGAAG-----C--AGGATATCTGGGGA-GGACTCACCTGCCTGTGCCTGGTCCCATGGTCCCCAACACAGCCCTGGAAGAGAGTGC-CTGTGAATGGGTCCCTCCACCCACATGTAGTTGCTCC--AGGCCTGGGTGGGTCCCCGGGCACTGGGGTCACATTTGGGGCTCAGGACACTCCTCCCCCAGAAGTTCTGCTCCCCTGGCAGATCTTCCCTGACCTGGGGTCT-CTCAGGAACCAGGACCTAG-GGCAGGGAGAAAACAACCCCAT------------CCCTTCTCTCTTCCAGAGATCTTACCCAGGCAAAGAAGGGCAGTGAAGTT---CAGGGTTCTGGCGCTGCCTTCCATGGTCCCCAGAGGTGCA---GACAGCTTATAAAATCCCCAG----AGCCTGCAGGATGGACAGATGCGTGGGGTGTGA-----CATGGCCCAGGCCCTTTTTCAGTCACAGGGCCC--TCATGACCAGCCTCACAGGAAGGGGAACAACCCA-CTCAGGGTCTTGCTCTTCTCTCC i canFam3.chr1 C 0 I 23794 e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=8646.000000 s hg38.chr19_GL949753v2_alt 275487 7 + 796479 TGTAGGG s panTro4.chr19 59229011 7 + 63644993 TGTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056957 7 + 60714840 TTTAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841480 7 - 106955855 TTTAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3755894 7 - 64156825 TTTAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55201159 7 + 59248254 TTTAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308125 7 + 51301725 TTTAGGT i papAnu2.chr19 C 0 C 0 s mm10.chr7 3869343 7 + 145441459 CTCAATG i mm10.chr7 C 0 C 0 e canFam3.chr1 19722661 23794 - 122678785 I e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=146578.000000 s hg38.chr19_GL949753v2_alt 275494 96 + 796479 CTGAGGTGGGGGTGGGC-CCAACTCCTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGCCTTGTCTTCAT s panTro4.chr19 59229018 95 + 63644993 CTGAGGTGGGGGTGGGC-CCAACTCCTCTACAGACATTTCAGACAGAAATGGGGTCTTTCCTGA-CCCCAGCCACTGTCTGTCTGCCTTGCCTTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56056964 96 + 60714840 TTGAGGTGGGGGAGGGC-CCAACCCCTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCCGACCCCCAGCCACTGTGTGTCTGGCTTGCCTTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841487 96 - 106955855 CTGAGGTGGGGGCGGGC-CCAACCCTTCTATAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCGCAGCCACTGTCTGTCTGGCTTGCCTTCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3755901 97 - 64156825 CTGAGGTGGGGGCAGGCACCAGACCCTCTGTAGACAGTTCAGACAGAAATGGGGTGTTTCCTGACCCCCAGCCACTGTCTGTCTGGTTCGTCCTCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55201166 96 + 59248254 CTGAGGTAGGGGCAGGC-CCAACCCCTTTGTAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCTCAGCCACCATCTGTCTGGCTTGCCTTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308132 96 + 51301725 CTGAGGTAGGGGCAGGC-CCAACCCCTTTGTAGACATTTCAGACAGAAATGGGGTCTTTCCTGACCCCCAGCCACCGTCTGTCTGGCTTGCCTTCAT i papAnu2.chr19 C 0 C 0 s mm10.chr7 3869350 93 + 145441459 GTGGGACTAGGCCAGGCAGTAGACCCTCTGCCATTAGGTTTTACACAGATGGCG--ATTCCTCATCCC--ACCAGTGTCTGCCTCACCTGTGCACAT i mm10.chr7 C 0 T 70185 s canFam3.chr1 19746455 30 - 122678785 CTGAGGT-----------CTAT-------------------------GATGGTG--------------CAGCCAGTGATT----------------- i canFam3.chr1 I 23794 C 0 e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=521216.000000 s hg38.chr19_GL949753v2_alt 275590 311 + 796479 CTCACTAAGACCTGGGATGCAGCAGGAAAAAGAACCAATGCTTTCCTGAGTCA-CCCCTTTCAGGTGAGGGCGACC---------T-CCTCCCTCTCACAGCCT-CCCTCAAGGTCTCCCTCCCTCCTTCAGCCCATCCATCAGTTCAGCGTTGTGGGGTCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTTCAGGGAAGATGCAGGTCCATGCTGCAGGGTGGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGTGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGGAA- s panTro4.chr19 59229113 312 + 63644993 CTCACTAAGACCTGGGATGCAGCAGGAAAAAGAACCAATGCCTTCCTGAGTCAGCCCCTTTCCGGTGAGGGCGACC---------T-CCTCCCTCTCACAGCCT-CCCTCAAGGTCTCCCTCCCTCCCTCAGCCCATCCATCAGCTCAGCATTGTGGGGTCCTTACCATGGCAGTCGTCCCTCCAGCCCCGGAGATCCTTCAGGGAAGATGCAGGTCCATGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGGAA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057060 312 + 60714840 CCCACTAAGACCTGGGATGTAGCAGAAAAAAGAACCAGTGCCTTCCTGAGTCATCCCCTTTCAGGTGAGGGTGACC---------T-CCTCCCTCTCACAGCCT-CCCCCAAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCTCAGCGTTGTGGGATCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTTCAGGGAAGATGCAGGTCCACGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCAGGCTGAGCTGCATGTGGCAGTGAGAACAGAGGAGAAATGCAGGGAC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841583 312 - 106955855 CTCACTAAGACCTGGGATGTGGCAGGAAAAAGACCTGGTGCCTTCCTGAGTCAGCCGCTTCCAGGTGAGGGCGACC---------T-CCTCCCTCTCACAGCCT-CCCCCAAGGTCTCCCTCCTTCCTTCAGCCTGTCCATCAGCTCAGCGTTGTGGGCTCCTTACCATGGCAGTCGTCCCTCCAGCCCTGGAGATCCTCCAGGGAAGATGCAGGTCCATGCTGCAGGGTAGA-CTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGCAGCCCGGGCTGAGCTGCGTGTGGCAGTGAGAACAGAGGAGAAATGCAGGGAA- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3755998 320 - 64156825 TTCACGAAGGCCTGGGAGATAGCAACAAATAGAACTCGTGCCTTCCTGTATGTG-CCCTTCCTGATCAGGGTGAGCCAAGGCTTTTCCTTCCTTCTCACAGCCT-CCCACAAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCGGCACGGTGTTGTGGGGTCCTTACCATGGCAGTCATCTCTTCAGCCCTGGAGATGCTTCAGGGAAGACACGGGTCCATGCTGCA-GGCAGA-CTCAGATCAGCAGAGACGCACGTGACACCTGACTGGGCAGTCCAGGCTGAGCTGTGTGTGGCAGTGAGCACAGAGGAGAAATGCAGGGAA- i rheMac3.chr19 C 0 I 361 s macFas5.chr19 55201262 321 + 59248254 CTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGATGCCTTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGACCGTGGGCTCCT-CTTCCCTCTCAGAGCCTCCCCATGGGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCTAAGCGTCGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCACGCTGCA-GGCAGA-CCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGCGTGTGGCAGTGAGAACACAGGAGAAACGCAGGGAA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308228 321 + 51301725 CTCGCTAAGACCTGGGATGTAGCAGGAGAAAGAACTGGTGCCTTCTTGAGTCAGCCCCTTTCAGGCGAGGGCGACCGTGGGCTCCT-CTTCCCTCTCAGAGCCTCCCCATGggatctccctccctccttcagccCGTCCATCGGCTCAGCGTCGCGGGGTTCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAAACGCACCTGACACCTGGCTGTGCAGCTCAGGCTGAGCTGCGTGTGGCAGTGAGCACAGAGAAGAAATGCAGGGAA- i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19746485 264 - 122678785 ----------CCTGAGA-----------------------CTTTCTCAGAT--GTCCTGTCCAGGTGAGGA-GACCAGGGCATGTA-CTTCCCTCCCAGAGCCT-CCCCCATGGGGTTCTT--TAACCTTAGCACATCCCT--------------GGGGTTCTGATCATGGATGGGGTCCC--CAGGCCCAGAAATGCTTAAGGGGACATG--GGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGATAGACGTACAATATCTCTGCTCACCTCAGATCTAGGTCACCACGACAATGAACCCA---AAGAAATGTAGGCAAA i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 70185 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=139636.000000 s hg38.chr19_GL949753v2_alt 275901 131 + 796479 TAAAGAGAGGAAGTCATGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGTAATCCCCCCC------TTTTTTTTTACTTCCC----------CCCCCTTTTTTT---------TTGGCTACAGCGTCCA---CCCCTGACGTCC s panTro4.chr19 59229425 131 + 63644993 TAAAGAGAGGAAGTCATGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAACAGTAATCCCCCCC------TTTTTTTTAAATTCCC----------CCCCCTTTTTTT---------TTGGCTACAGCGTCCA---CCCCTGACGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057372 146 + 60714840 TAAAGAGAGGAAGTCATGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGTAATCCCCTCCCC-tttttttttttaacttccctttttttttttttttttttttt---------ttGGCTACAGCGTCCG---CCCCTGACATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102841895 146 - 106955855 TAAAGAGAGGAAGTCATGACCCTCTTTGTGGCCCTGGACTATAGGTTTTCTTTCTAATCAATAGTAATCCCCCCCCCGttttttttttttacttccc----------tttttttttttttGCTACAGCTTCCCTACAGCTTCCA---CCCCTGACGTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55201583 126 + 59248254 TAAAGAGAGGAAGTCGTGACCCTCTTTGTGGCCTTGGACTATAGATTTTCTTTCTAATCAATAGTAAT-CCCCCC-------TTTTGTTAACTTCCT----------CCCTTTTTGTTT---------T---CTACAACGTCCA---CCCCTGACCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308549 127 + 51301725 TAAAGAGAGGAAGTCGTGACCCTCTTTGTGGCCCTGGACTATAGATTTTCTTTCTAATCAATAGTAATccccccc-------TTTTGTTAACTTCcc----------ccctttttgttt---------t---ctacaacGTCCA---CCCCTGACCTCC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19746749 108 - 122678785 TAGGGAAAGAAA--CACAGCCCCTCTCCTGACCCCAGAGCCTGGGCTTTCTTTCTAAC--ACAG-----CCTCCA------------TGGACTTCTC----------TTTTTTCCTGTG---------C------CATTGTCCATATCCCCTTT----- i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 70185 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T e rheMac3.chr19 3756318 361 - 64156825 I a score=115145.000000 s hg38.chr19_GL949753v2_alt 276032 64 + 796479 CTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCATTGCATCCTTG------GCCGTCCCTC s panTro4.chr19 59229556 64 + 63644993 CTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCGTTGCATCCTTG------GCCATCCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057518 64 + 60714840 CTGGGAACAAACCTC-TGAGTCTTTCCTGCCTCCTCGGTGCCCGTTGTGTCCTTG------GCCATCCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842041 65 - 106955855 CTGGGAACAAAGCTCTTGAGTCTTTCCTGCCTCCTCTGTGCCCGTTGCGTCCTTG------GCAGTCCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3756679 64 - 64156825 CTGGGAAAAAACCTT-TGAGTCTTTCCTGCCTCCTCGGTGCCCCTTGCGTCCTTG------GCCGTCCCTC i rheMac3.chr19 I 361 C 0 s macFas5.chr19 55201709 64 + 59248254 CTGGGAACAAACCTC-TGAGTCTTTCCGGCCTCCTCGGTGCCCCTGGCGTCCTTG------GCTCTCCCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308676 64 + 51301725 CTGGGAACAAACCTC-TGAGTCTTTCCGGCCTCCTTGGTGCCCCTTTCGTCCTTG------GCTGTCCCTC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19746857 68 - 122678785 ATGGGAACACAGCCT-TGAGTCCCTCCCAGCACATCATTGCCCCTTGT-TCCTGGGGCAGAGCCATCCTC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3869443 70185 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 47001118 20516 + 50890351 T a score=1106026.000000 s hg38.chr19_GL949753v2_alt 276096 529 + 796479 ----TGCA-CCTTAATCCCTGTT--CAACGTTTTGGGAACAATGACTTATATTTGAGCTTTGATTTGGGGAGTGGGGGAGGAAGCTGATATTTAttcagagactggt-tatcattca-ctgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgcagcttgttgtcacaaatcccactggtcacagtggttgt--ggggTCAGTGGTTCCTGACACA-TGGGAGAGG-----CTCATCTGTGCTTCATTTCCAGACCAGGTCAGCACATGAAGTGTTTGGGATATGATAGGATCATAGCGTTG------------------GATGATTGATGTG--TTCTCTCAAGATCTCATATCTGGGATCCC---TAATGGAGAAATG-TACGTGAAGTATTTCTGAAATATGCAGAACATCAATATCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCTCCAAGTGTAGATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCATCAAGGGGTCATTAG-GGTGGAGGTTTCCACC s panTro4.chr19 59229620 529 + 63644993 ----TGCA-CCTCAATCCCTGTT--CAACGTTTTGGGAACAATGACTTATATTTGAGCTTTGATTTGGGGAGTGGGGGAGGAAGCTGATATTTAttcaaagactggt-tatcattca-ctgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgcaGCTTGTTGTCACAAATCCCACTGGTTACAGTGGTTGT--GGGGTCAGTGGTTCCTGACACA-TGGGAGAGG-----CTCATCTGTGCTTCATTTCCAGACCAGGTCAGCACATGAAGTGTTCGGGATATGATAGGATCATAGCGTTG------------------GATGATTGATGTG--TTCTCTCAAGATCTCACATCTGAGATCCC---TAATGGAGAAATG-GACATGCAGTATTTCCGAAATATGCAGAACATCAATGTCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCCCCAAGTGTAAATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCGTCAAGGGGTCATTAG-GGTGGAGGTTTCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56057582 514 + 60714840 ----TGCA-CCTCAATCCCTGTT--CAACGTTTCGGGAACAATGACTTATGTTTGAGCTTTGATTTGgggagtgggggaaggagctgatatttattcaaagactggt-tatcgtcca-ctgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgcaGCTTGTTGTCACAAATCCCACTCATCA-----------------CAGTGGTTCCTGGCACA-TGGGAGAGG-----CTCATCTGTGCTTCATTTCCAGACCAGGTTAGTACATGAAGTGTTTGGGATATGATAGGATCATAGCGTTG------------------GATGATTGACGTG--TTCACTCAAGATCTCACATCTGAGATCCC---CAATGGAGAAATG-TACATGCAGTATTTCTGAAATATGCAGAATATCAATGTCATGA-GCAGAAAAA--------------------GAGGCGTGGAAGTCCCCAAGTGTAGATGGATCCGCATTAAATAACAGAGGCCAGAGGTGAGTCGCCACACATGCCTGGGACCATCAAGGGGTCATTAG-GGTGGAGGTTTCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842106 527 - 106955855 ----TGCA-CCTCAATACCTGTT--CAACGTTTTGGGAACAATGAC--ATGTTTGAGCTTTGATTTGGggagtgggggagggagctgatatttattcaaagactggt-tatcatcca-ctgcctacgtgacctcgggcggtaatgaacaatttctgagcctcagcttcttcctttgcagcttgttgtcacaaatcccactcatcacagtggttgt--ggggTCAGTGGTTCCTGGCACA-TGGGAGAGG-----CTCATTTGTGCTTCATTTCCAGACCAGGTTAGTACATGAGGTGTTTGGGATATGATAGGATCATAGCGTTG------------------GATGACTGATGTG--TTCACTCAAGATCTCACATCTGAGATCCC---TAATGGAGAAATG-TACATGCAGTATTTCTGAAATATGCAGAACATCAATGTCATAA-GCAGAAAAA--------------------GAGGTGTGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACAGAGGCCAGAGGTGAGTCGCCACAGGTGCCTGGGACCATTAAGGGGTCTTTAG-GGTGGAGGTTTCCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3756743 525 - 64156825 ----TGCA-CCTCAATTCCTGGT--CAACATTTTGGGAACAATGACTTACGTTTGCGCTTTGATTTGAGGAGTTGAGGAGGGAGTTGATACTTATTTGATGACTGtt-tgtcatcca-ctgcctatgtgaccttggtctgtagtgtcccatctctgagcctcagcttcttcctttgcaggctgttgtcatgaatcccactcgtcaccgtggttgt--ggggTCAGTGGTGCCTGGACAT-TGGGAGGGG-----CTCATTTGTGCTTGATTTCCAGACCAGGGTAAGACCTGAG--GCTTGGGACATGAGAGGATCTTGGTGTTG------------------GATGGTTGATGCG--TCCACTCATGATGTCGCCCCTGA---CCC---TAATGGAGAAGTG-TACATCAGGCATTTCTGAAATACCCAGAGAATCAATATCATGA-GCAGAAAAA--------------------GAGGTGTGGAAGTTCTCAAGTGTAGATGGATCAACAACAAAGAACAGAAGCCAGAGATGAGATGCCACAGGGTCCTGGGACCATCAAGGGGTCATTAACGGTTGAGGTTTCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55201773 550 + 59248254 ----TGCA-CCTCAATCCCTGTT--CAACGTTTTGGGAACAATGACTTATGTTTGAGCTTTGATTTGGGGAGTGGGGGAGGGAGCTGATATTTATTCAATGACCGGT-tatcatcca-ctgcctacgtgacctcgggcggtaatgaaccatctctgagcctcagtttcttcctttgcaGCTTGTTGTCGCAAATCCCACTCGTCACCATGGTTGT--GGGGTCAGTGGTTCCTGGGACA-TGGGAGAGG-----CTCCTTGGTGCTTCATTTCCAGACCAGGTGAGGACATGAGGTGTTTGGGATATGATAGGATCAGAGCGTTG------------------GATGATTGATGTG--TTCACTCGAGATCTCACATCTGAGATCCC---TAATGGAGAAATC-TACAGGCAGCATTTCTGAAATACGCAGAACATAACTGTCAAGAGGCATGGAAGCCCCCAAGTGTAGATGTCATGAGGCATGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACGGAGGTCAGAGGTGGGTCGCCACAGGTGCCCAGGACCCTCACGAGGTCATTAA-GGTGGAGGTTTCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47308740 537 + 51301725 ----TGCA-CCTCAATCCCTGTT--CAACGTTTTGGGAACAATGACTTATGTTTGAGCTTTGatttggggagtgggggagggagctGACATTTATTCAATGACCGGT-TATCATCCA-CTGCCTACGTGACCTCGGGCGGTAGTGAaccatctctgagcctcagtttcttcctttgcaGCTTGTTG-------------TCGTCACCGTGGTTGT--GGGGTCAGTGGTTCCTGGGACA-TGGGAGAGG-----CTCCTTGGTGCTTCATTTCCAGACCAGGTGAGGACATGAGGTGTTTGGGATATGATAGGATCAGAGCGTTG------------------GATGATTGATGTG--TTCACTCGAGATCTCACATCTGAGATCCC---TAATGGAGAAATC-TACAGGCAGCATTTCTGAAATACGCAGAACATCAGTGTCATGAGGCATGGAAGCCCCCAAGTGTAGATGTTATGAGGCATGGAAGTCCCCAAGTGTAGATGGATCCACATTAAATAACGGAGGTCAGAGGTGGGTCGCCACAGGTGCCCAGGACCCTCACGAGGTCATTAA-GGTGGAGGTTTCCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46980602 544 + 50890351 ----TGCA-CCTCGATTCCTGGT--CAACATTTTGGGAACAATGACTTATGTTTGCGCTTTGATTTGAGGAGTTGAGGAGGGAGTTGATACTTATTTGATGACTGGT-TGTCATCCG-CTCCGtatgtgaccttggtctgcagtgtcccatctctgagcctcagcttcttcctttgcagactgTTGTCATGAATCCCACTCGTCTTCGTTGTCGT--GGGGTCAGTGGTGCCTGGGACATTGGGAGGGG-----CTCATTTGTGCCTGATTTCCAGAGCAGGGTAAGACCTGAGGTGCTTGGGACATGAGAGGATCTTAGTGTTGGACTCCACAGTCTACGTAGATGATTGATGTT--TCCACTTAAGATGTCACATCTGA---CCC---TAATGGAGAAATG-TGCATCAGGTGTTTCTGAAATACCCAGAGCATCAAGGTCATGA-GCACAAAAA--------------------GACATGTGGAAG-CCCTGAGTGTAGAAGGAGCCACAAGAAAGAACAGAGGCCAGAGGTGAGATGCCACAGGGTCCTGGCACCATCAAGGGCTCATTAG-GGTGGAGGTTTCCGCC i chlSab2.chr6 T 20516 C 0 s canFam3.chr1 19746925 509 - 122678785 TCCATCCATCCTGGGGTCCTGTCTGTAAGCTGTATGGAGCACATATTTGGTTTAGAGCTCTGATT-------TTGAAGAAAAACTTATCCTTTATCTAAATATTCATCTATTATCCATTTGTCTATGTGACCCAGGGTGATAATATCCTGTCTACAAGTCT--------------------TATTGTCCTGAACCCCACTCCTCAGAGTAGTTGCGGGGGGTCAGTGGTTCCTAGTTCA-GGGGGGAGGGGGAATCCATCACTG-TTAGTTTTCAGAACAGGTTAA---ATGGA--GTTTGGTACATGGGA-GATTATGGGGTCA------------------GACCCATAATTTGGACCCAGTCAAGACTCCTCAT---GGACTCCACATACCACATAAGTGCTACTGACCATATTTCTGAAGTGTGTAGAG----ATAGTCATAT-GCAGGAACA--------------------GAGAAATGAGAGTTCTCCAAATCATAGAGAACCACAAGACAGAACAGAGAACAAGGCAGAGCAGCTGCCAATTCCCAGGCCCATCATCAGGCCATCAA--GCAGAGGCCTCCACC i canFam3.chr1 C 0 T 1378 e mm10.chr7 3869443 70185 + 145441459 T e calJac3.chr22 45557512 6845 + 49145316 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 276625 1 + 796479 a s panTro4.chr19 59230149 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058096 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842633 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3757268 1 - 64156825 A i rheMac3.chr19 C 0 I 74644 s macFas5.chr19 55202323 1 + 59248254 a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47309277 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 46981146 1 + 50890351 A i chlSab2.chr6 C 0 I 27447 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I a score=289007.000000 s hg38.chr19_GL949753v2_alt 276626 179 + 796479 aaggtggcccaaagtgattagactcaacatgccagacctgccttgg----tttactacggagaaagagattcaaatgtttaggaaggttaaaatgttagagaggagttgtcattcaagacggcctcatctaaattggaagagtctagaagatctatctttcttttctt-----------ttttttt---tttttttt s panTro4.chr19 59230150 187 + 63644993 aaggtggcccaaagtgattagactcaacatgccagatctgccttgg----tttactacagagaaagagattcaaatgtttaggaaggttaaaatgttagagaggagttgtcattcaagacgggctcatctaaattggaagagtctagaagatctatctttcttttctt---ttcttttcttttctt---tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058097 177 + 60714840 aaggtggcccaaagtgattagactcaaaatgccagacctgccttgg----tttactacagagaaagagattcaaatgtttaggaagattaaaatgttagagaggagttgtcattcaagg-gggctcatctaaattggaagagtctagaagatctatctttctatttt------------tttttta---tttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842634 190 - 106955855 aaggtggcccaaagtgattagactcaaaatgccagacctgccttgg----tttactacagagaaagagattcaaaggtttaggaagattaaaatgttagagaggagttgtcattcaagatgggctcatctaaataggaagagtctagaagatctatctttctttcttttcttttcttttttttttt---tttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55202324 185 + 59248254 aaggtggcccaaagtgattagactcaaaatgccagacctgccttggtttatttactatagagaaacggattcaaatgtttaggaagattgaaatgttagagaggagttgtcattcaaaa-ctcctcatctaaattggaagagtctagaagatgtatctttcttttttt-----------ctttttcttttttttttt i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47309278 182 + 51301725 AAGGTGGCACAAAGTGATTAGACTCAAAATGCCAGACCTGCCTTGGTTTATTTACTATAGAGAAACGGATTCAAATGTTTAGGAAGATTGAAATGTTAGACAGGAGTTGTCATTCAAAA-CTCCTCATCTAAATTGGAAGAGTCTAGAAgatgtatctttctttttta-----------ctttttc---tttttttt i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 47008594 178 + 50890351 aaggtggcccaaaatgattagactcaaaatgccagacctgccttgg----tttactatagagaaagggattcaaatgtttaggaagattgaaatgttagagaggagttgtcattcaaaa-ctcctcatctaaattggaagagtctagaagatgtatctttctttttta-----------ctttttc---tttttttt i chlSab2.chr6 I 27447 T 13296 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=76948.000000 s hg38.chr19_GL949753v2_alt 276805 42 + 796479 gagatgcagtctcactctgttgcccaggctggagtgcagtgg s panTro4.chr19 59230337 42 + 63644993 gagatgcagtctcactctgttgcccaggctggagtgcagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058274 42 + 60714840 gagatgcagtctcactctgttgcccaggctggagtgcagtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102842824 42 - 106955855 gagatgaagtctcactctgttgcccaggctggagtgcagtgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55202517 42 + 59248254 gagacggagtctcactctgttgcccaggctggagcgcagtgg i macFas5.chr19 I 8 I 14531 s papAnu2.chr19 47309468 42 + 51301725 gagacagagtctcactctgttgcccaggctgaagcgcagtgg i papAnu2.chr19 I 8 I 15271 s chlSab2.chr6 46995476 42 + 50890351 gagacggagtctcactctgttgcccaggctgaagcgcagtgg i chlSab2.chr6 T 13296 I 21211 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=1146.000000 s hg38.chr19_GL949753v2_alt 276847 2 + 796479 ca s panTro4.chr19 59230379 2 + 63644993 ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56058316 2 + 60714840 ca i ponAbe2.chr19 C 0 I 4147 s nomLeu3.chr10 102842866 2 - 106955855 ca i nomLeu3.chr10 C 0 I 1742 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=128658.000000 s hg38.chr19_GL949753v2_alt 276849 1448 + 796479 c---cctcctcctcctcctcctcctccacaccctcctcctcctccttcttctccttctccttctccctctccctctccctctccctctccttcaccttctccttctccttcttcttcttctatttttttttttttttttttttgagacggagtctcgctc-tgtcgcccaggctggagtgcaatggcgtgatctcggttcactgcaacctccgcctccctggttcaagcaattctcctatctcagcctcccaagtagctgggattacaggcacccaccatcatgccaggctaatttttgtatttttagtagaggtggggtttcatcatgttgaccaggctggtctcgaactcctaacctcaagtgatcctcctgccttggcctcccaaagtgctgggattacatgcgtgagccaccatgcTttcttatccagcactgctaataaagaccaccagaaaccattttccttgagcaggcacagccagcaatatacattcactgtcctacctcaggcacataccaactgtttagttctatcccatagtttagttctcaccataatcatcattatcatctcctttcataaaatgttagactgaatcattacattgataaaattatgctggttggaatgcccatcaatgacagactggataaagatactgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacaaacacaggaaccaaaaaccaaacactgcatgttctcattcataagtgggagctgaacaatgagaacacatggacacaggaatggaaacaacacacacttgggcctgttggggggaa-aagggaggaagagcctcaggataaataactaatgggtgccgggtttaatacctaggtgatgggctgatgggtgcaacaaaccaccacagcacacgtttgtttacttatgtaacaaacctgcaggtcctgcacatgtatcccagaacataaaattaaattaaaTTAGATATCAaaaataaaaataaaataaagttaaaaaaagaaattatgctatttggaccaggaaagcaagaagtagcacctattccaaatttattagtaacacatttgcatgacagagggtgagaaataaattccacaaaaatattggagccttccgcctcaacacaatttctgagtccactgatatggaaaatgttgagatgtaacttctaaagcaaaaggtaagttgttgcatctggcccttcctacaaccaaaagaaccatggtacctagtaagcctcttgggttttttttttttttttcctgagacagaattttgctttttttgcccaggctggagtgcagtggcacaatctgggctcactgcaaccgatttcaagcgattctcctgcctcagcctctctag s panTro4.chr19 59230381 1433 + 63644993 ccctcctcctcctcctcctcctcctccacactctcctcctccttctccttctccctctccttctccctctccctctccctctccttctccctctccttctccttctccttcttgttcttcta---------------ttttttgagacagagtttcattcttgttgcccaggctggagtgcaatggcgtgatctcggttcactgcaacctccgcctccctggttcaagcaattctcctatctcagcctcccaagtagctgggattacaggcacccgccatcatgccaggctaatttttgtatttttagtagaggtggggtttcatcatgttgaccaggctggtctcgaactcctaacctcaagtgatcctcctgccttggcctcccaaagtgctgggattacatgcgtgagccaccatgcTttcttatccagcactgctaataaagaccaccagaaaccattttccttgagcaggcacagccagcaatatacattcactgtcctacctcaggcacataccaactgtttagttctatcccatagtttagttctcaccataatcatcattatcatctcctttcataaaatgttagactgaatcattacattgataaaattatgctggttggaatgcccatcaatgacagactggataaagatactgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgtcctttgcagggacatggatggagctggaagccattatcctcagcaaacaaacacaggaaccgaaaaccaaacactgcatgttctcattcataagtgggagctgaacaatgagaacacatggacacaggaatggaaacaacacacacttgggcctactggggggaagaagggaggaagagcctcaggataaataactaatgggtgcggggtttaatacctaggtgatgggctgatgggtgcaacaaaccaccacagcacacgtttgtttacttctgtaacaaacctgcaggtcctgcacatatatcccagaacataaaataaaattaa-----atatcaaaaataaaaataaaataaagttaaaaaaagaaattatgctatttggaccaggaaagcaagaagtagcacctagtccaaatttattagtaacacatttgcatgacagagggtgagaaataaattccacaaaaatattggagccttctgcctcaacacaatttctgagtccactgatatggaaaatgttgagatataacttctaaagcaaaaggtaagttgttgcatctggcccttcctacaaccaaaagaaccatgatacctagtaagcctcttgggtttttttttttttttttctgagacagaattttgctttttttgcccaggctggagtgcagtggcacaatctgggctcactgcaaccgatttcaagcgattctcctgcctcaccctccctag i panTro4.chr19 C 0 I 756 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 278297 290 + 796479 tagctgggattacaggtgcccgccctcacgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcgaactcctgactgcatgatccgcccacctcggcctcccaaagtgctaggattacaggcgtgagccaccgtgcctggccctacctcttggattttgaaagcaacatatttctcatgtgggtgtgctccattagcccatttactaagtgactcaaaaggaggccgggtgcagtggctcatgcctgtaatcccagcacttt e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I e panTro4.chr19 59231814 756 + 63644993 I a score=76654.000000 s hg38.chr19_GL949753v2_alt 278587 833 + 796479 gggaggccgaggtgggcggatcatgaggtcaggagtttgagaccagtctgaccaacatggcaaaactccgtctctactaaaaatacaaaaaattagccaggcatggtagcgggcgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcagaggttgcagtgaaccgagattgtcccattgcattccagcctggacaacactgtgagactccatctcaaaaaaaaaaaaaaagttttgagtggggtgtggaataggggaaggctctgcaacagatccaggtcctgcacaagctcttctgccacctgggccatatgatccagtggaacagatggtgcttgaagtgtcagtggcagatcgagatgctgtttggaggttttgacaagctccttcctataggtgaattggggcttagacacttaggattgtggagcaaaatcctatcatcattcacagatagctagtctccttttgaaaaacaTATATTTTTTTTTgccgggcacagtggctcatgcctgtaatcccagcactttgggagaccaaggtgggcagatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaaccc-tgtctccactaaaaataaaaaaattagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgaggcaggagagtcgcttgaacccaggagacggagattgcagtgagccgagatcatgccactgcactctagcctgtgcaagaagggtgagactccatctcaaaaaaaaaaaaaaaggaaaaTATTATATTTTTTT s panTro4.chr19 59232570 833 + 63644993 ggggggcagaggtggggggttcatgaggtcaggagttcgaggccagtctgaccaacatggcaaaactccgtctctactaaaaatacaaaaaattagccaggcatggtagcgggcgcctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctgggaggcagaggttgcagtgagccgagattgtcccattgcattccagcctgggcaacactgcgagactccatctcaaaaaaaaaaaaaaagttttgagtggggtgtggaataggggaaggctctgcaacagatccaggtcctgcacaagctcttctgccacctgggccatatgatccagtggaacagatggtgcttgaagtgtcagtggcagatcgagatgctgtttggaggttttgacaagctccttcctataggtgaattggggcttagacacttaggattgtggagcaaaatcctatcatcattcacagatagctagtctccttttgaaaaacaTATATTTTTTTTTgccgggcacagtggctcatgcctgtaatcccagcactttgggagaccaaggtgggcagatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacccctgtctccactaaaaataaaaaaattagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgaggcaggagagtcacttgaacccaggaggcggagattgcagtgagccgagatcatgccactgcactctagcctgtgcaagaagggtgagactccatctcaaaaaaaaaaaaaa-ggaaaataaTATATTTTTTT i panTro4.chr19 I 756 C 0 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e ponAbe2.chr19 56058318 4147 + 60714840 I e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=44200.000000 s hg38.chr19_GL949753v2_alt 279420 164 + 796479 CCATTATTGAGCCTTAGGAGAGACTGGATGCTTGGGCACAGGTCACCAAGGTACCATGAAATGTGAAGTGTGTGTTAGCCGatgcaagctgtataataagatcatgtccactcaggccctgaaagtgtgagcaatttacacaaagcagggggccaaatgcccat s panTro4.chr19 59233403 164 + 63644993 CCATTATTGAGCCTTAGGAGAGACTGGATGCTTGGGCACAGGTCACCAAGGTACCATAAAATGTGAAGTGTGTGTTAGCCGatgcaagctgtataataagatcatgtccactcaggccctgagagtgtgagcaatttacacaaagcagggggccaaatgcccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062465 164 + 60714840 CCATTATTGAGCCTTAGGAGAGACTGGATGCTCGGGCATAGGTCACCAAGGCACCGTGAAATGTGCAGTGTGTGTTAGCTGatgcaagctgtataataagatcatgtccactcaggccctgaaagcgtgagtaatttacacaaagcagggggccaaatgcccat i ponAbe2.chr19 I 4147 C 0 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e nomLeu3.chr10 102842868 1742 - 106955855 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=112662.000000 s hg38.chr19_GL949753v2_alt 279584 215 + 796479 ggttcctgtccctgctacacaaccttctgccttccagcctgcacctataatctcatggggatttctctatgctccgttgacagagaaagtgaagactcaagcctggtttgcagatggttctgcacgatatgcagacgccacccagaggttgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAG s panTro4.chr19 59233567 215 + 63644993 ggttcctgtccctgctacacaaccttctgccttccagcctgcacctataatctcatggggatttctctatgctccgttgacagagaaagtgaagactcaagcctggtttgcagaaggttctgcacaatatgcaggcgccacccagaggttgagagcttcagcgcttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062629 215 + 60714840 ggttcctgcccctgctacacaaccttctgccttccagcctgcatctataatctcatggggatttctctaccatcagttgacagagaaagtgaagactcaatcctggtttgcagatggttctgcacgatctgcaggcgccacccagaggctgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGCGCAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844610 211 - 106955855 ggttCCTGTCcctgctacacaaccttctgccttccagcctgcacctataatctcatagggatttctctacgctcagttgac----aaagtgaagactcaagtctggtttgcagatggttctgcacgatatgcaggcgccacccagaggttgagagcttcagcacttctgcccctttatgggacatccctaaaagacagtAAAGTCAGGGTGCAAG i nomLeu3.chr10 I 1742 C 0 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e calJac3.chr22 45557512 6845 + 49145316 I e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 279799 1 + 796479 T s panTro4.chr19 59233782 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062844 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844821 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45564357 1 + 49145316 T i calJac3.chr22 I 6845 C 0 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e chlSab2.chr6 46995518 21211 + 50890351 I e papAnu2.chr19 47309510 15271 + 51301725 I e macFas5.chr19 55202559 14531 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=5348.000000 s hg38.chr19_GL949753v2_alt 279800 2 + 796479 GA s panTro4.chr19 59233783 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062845 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844822 2 - 106955855 GA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217090 2 + 59248254 GA i macFas5.chr19 I 14531 C 0 s papAnu2.chr19 47324781 2 + 51301725 GA i papAnu2.chr19 I 15271 C 0 s chlSab2.chr6 47016729 2 + 50890351 GA i chlSab2.chr6 I 21211 C 0 s calJac3.chr22 45564358 2 + 49145316 GA i calJac3.chr22 C 0 C 0 e mm10.chr7 3869443 70185 + 145441459 T e canFam3.chr1 19747434 1378 - 122678785 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=34373.000000 s hg38.chr19_GL949753v2_alt 279802 12 + 796479 CCCCCTTCCTGA s panTro4.chr19 59233785 12 + 63644993 CCCCCTTCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062847 12 + 60714840 CCCCCTTCCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844824 12 - 106955855 CTCCCTTCCTGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217092 12 + 59248254 CCCCCTTCCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324783 12 + 51301725 CCCCCTTCCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016731 12 + 50890351 CCCCCTTCCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564360 12 + 49145316 CCCCCTTCCCGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102775795 12 + 122678785 CTTTCTGCCTGG i canFam3.chr1 I 2946 C 0 e mm10.chr7 3869443 70185 + 145441459 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=73775.000000 s hg38.chr19_GL949753v2_alt 279814 34 + 796479 GGACAG----AGCCTGCGGCTGGGCGCCTTGAGTGTCC--------- s panTro4.chr19 59233797 34 + 63644993 GGACAG----AGCCTGCGGCTGGACCCCTTGAGTGTCC--------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062859 34 + 60714840 GGGCAG----AGCCTGTGGCTGGGCCCCTTGAGTGTCC--------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844836 34 - 106955855 GGACAG----AGCGTGTGGCTGGGCCCCTTGAGTGTCC--------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217104 34 + 59248254 GGACAG----AGCCTGGGGCTGGGACCCCTGAGTGTCC--------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324795 34 + 51301725 GGACAG----AGCCTGCGGCTGGGACCCCTGAGTGTCC--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016743 34 + 50890351 GGGCAG----AGCCGGGGGCTGGGACCCCTGAGTGTCC--------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564372 34 + 49145316 GGGCAG----AGCCTGGGGCTGGGACCCCTGAGTGTCC--------- i calJac3.chr22 C 0 I 153 s mm10.chr7 3799258 37 + 145441459 GGACAGTTATAACCTGAGGCCTAGGATCCTGTGTGTC---------- i mm10.chr7 T 70185 C 0 s canFam3.chr1 102775807 33 + 122678785 AGAAGG----GGCCCCAGG----------GGAGAGTCCAGCTCCTGC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3757269 74644 - 64156825 I a score=72158.000000 s hg38.chr19_GL949753v2_alt 279848 29 + 796479 TCTCACCTGTCACCACCAGCACCAGGGGG- s panTro4.chr19 59233831 29 + 63644993 TCTCACCTGTCACCACCAGCTCCAGGGGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062893 28 + 60714840 TCTCACCTGTCACCACCAGCTCCA-GGGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844870 28 - 106955855 TCTCACCTGTCACCACCAGCTCCA-GGGG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217138 28 + 59248254 TCTCACCTGTCACCACCAGCTCCA-GGGG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324829 28 + 51301725 TCTCACCTGTCACCACCAGCTCCA-GGGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016777 28 + 50890351 TCTCACCTGTCACCACCAGCTCCA-GGGG- i chlSab2.chr6 C 0 I 122 s mm10.chr7 3799295 28 + 145441459 TCTCACCTGTCACCACCAGCTCCA-GGAG- i mm10.chr7 C 0 I 1 s canFam3.chr1 102775840 29 + 122678785 CCTTACCTCTAACCTTCAGGGTCA-GGAGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45564406 153 + 49145316 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=129204.000000 s hg38.chr19_GL949753v2_alt 279877 123 + 796479 GTCACTGTGCCCTGACCGGCCTGT----GGCACTTTGATAATAACAGTGACAGTTCTCTGCATTGTGCTCTGGCTTGTG--TGAGATATGGGTCCTGGTCTTGTTCCCAGGCCCCAGTGGTTTCCTTAA s panTro4.chr19 59233860 123 + 63644993 GTCACTGTGCCCTGACCGACCTGT----GGCACTTTGATAATAACAGTGACAGTTCTCTGCATTGTGCTCTGGCTTGTG--TGAGATATGAGTCCCGGTCTTGTTCCCAGGCCCCAGTGGTTTCCCGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56062921 123 + 60714840 GTCGCTGTGCCCTGACCGGCCTGT----GGCACTTTGATAATAACAGTGATATTTCTCTGCATTGTGCTCTGGCTTGTG--TGAGTTATAGGTTCTGGTCTTGTTCCCAGGCCCCAGTGGTTTCCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102844898 123 - 106955855 GTCGCTGTGCCCTGACCGGCCTGT----GGCACTTTGATAATAACAGTGATATTTCTCTGCATTGTGCTCTGGCTTGTG--TGAGATATGGGTCCTGGTCTTGTTCACAGGCCCCAGTGGTTTCCTTAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217166 122 + 59248254 GTCACTGGGCTCTGACCAGCCTTC----AGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGGGTTCTGTG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324857 122 + 51301725 GTCGCTGGGCTCTGACCAGCCTTC----AGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTtgttcctgggctccagtgggTTCTGTG- i papAnu2.chr19 C 0 C 0 s mm10.chr7 3799324 122 + 145441459 -TCACTGTAGCCTGA-TGATTTATACTGGGTGCT---GTAGGAACATTCATATTGACCTGCAT--TACTCAGGTCTACATTTGAGAATGAGAATTCAGCCTTGTTTGCTGGCTTCTGTTAGTTCTTTGT i mm10.chr7 I 1 I 3 s canFam3.chr1 102775869 120 + 122678785 -TCACTCCACTGTGACCAACCATT----CCTGCTCTGATATGCACACTGGTA-TTCACTGCATAGTGTGGGCTCACGGA--TTCAATGTAGTAACTGGCATTGTTGCTGAAATCCTGTGAGATCTTCA- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45564406 153 + 49145316 I e chlSab2.chr6 47016805 122 + 50890351 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=6872.000000 s hg38.chr19_GL949753v2_alt 280000 3 + 796479 TGT s panTro4.chr19 59233983 3 + 63644993 TGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063044 3 + 60714840 TGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845021 3 - 106955855 TGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217288 3 + 59248254 TGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324979 3 + 51301725 TGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016927 3 + 50890351 TGT i chlSab2.chr6 I 122 C 0 s mm10.chr7 3799449 3 + 145441459 GGT i mm10.chr7 I 3 C 0 s canFam3.chr1 102775989 3 + 122678785 TGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45564406 153 + 49145316 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=199106.000000 s hg38.chr19_GL949753v2_alt 280003 91 + 796479 TCTGTGACACTGAGCTT------------------------------CCCTCTTTATCCAGCTGGTGCTCTTGGGGCTCCAGGGTACCCTGACACCAGGTGGTCACAGGCCTCCTCCCAGG s panTro4.chr19 59233986 91 + 63644993 TCTGTGACACTGAGCTT------------------------------CCCTCTTTATCCAGCTGGTGCTCTTGGGGCTCCAGGGTACCCTGACACCAGGTGGTCACAGGCCTCCTCCCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063047 121 + 60714840 TCCATGACACTGAGCTTCCCTCTTTATCCAGCTGGTACTCTTGGGCCCCCTCTTTATCCAGCTGGTACTCTTGGGCCTCCAGGATACCCTGACACCAGGTGGTCACAGGCCTCCTCCCGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845024 91 - 106955855 TCCATGACACTGAGCTT------------------------------CCCTCTTTATGCAGCTGGTACTCTTGGGCCTCCAGGATACCCTGACACCAGGTGGTCACAGGCCTCCTCCCGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217291 91 + 59248254 TCCAGGGCGCTGTGCTT------------------------------CCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324982 91 + 51301725 TCCAGGGCGCTGGGCTT------------------------------CCCTCTTTATGCAGACGGtactcctgggcctccagggtCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016930 91 + 50890351 TCCAGGGCTCTGGGATT------------------------------CCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCCGACACCAGATGGTCACGGGGCTCCCCCGGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564559 91 + 49145316 TCCTTGACATTGAACCT------------------------------CCATCTTTAGCCAGACGGTACTCCTGGGCCTCCTGGGTGCCCTGACACCAGAGGGTCACAGGCTTATTCCAGGT i calJac3.chr22 I 153 I 403 s mm10.chr7 3799452 87 + 145441459 TTTATATAGCT----TT------------------------------CCATCTTTATAGAGGTGGTACTCATTGGCTCCAATTGTCTCTTCACACAAGAAGGTCACCTTAGTCCACTGGGA i mm10.chr7 C 0 C 0 s canFam3.chr1 102775992 91 + 122678785 ACAAGGATCCAGAGTCC------------------------------TTCTCTTTGTACAGAGAGTAGATGTCAGCCTGCAGAGAAACCTGACACCAGATGGTCACAGGGCTCCCCTCACT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3757269 74644 - 64156825 I a score=405303.000000 s hg38.chr19_GL949753v2_alt 280094 221 + 796479 GATCACACAGTCTGGCTCAGTCCAGGTGGTGGGTTTAGTGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATTCCTCA-AATCCCAGCTGTCAGTCCCAAGACCCGCCCAGATGTCCCCATCAGTCAGCTCAGAGATGCTGT-----TCTCCATC-CCCAGGTGGCTGGG----GGTGGCCCGTTGTCCCCAGTG--AGCAGGAGCGACCTGGGACT s panTro4.chr19 59234077 221 + 63644993 GATCACACAGTCTGGCTCAGTCCAGGTGGTGGGTTTAGTGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCA-AATCCCAGCTGTCAGTCCCAAGACCCGCCCAGATGTCCCCATCAGTCAGCTCAGAGATGCTGT-----TCTCCCTC-CCCAGGTGGCGGGG----GGTGGCCTGTTGTCCCCAGTG--AGCAGGAGCGACCTGGGACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063168 221 + 60714840 GATCACACAGTCTGGCTCAGCCTAGGTGGTGGGTTTAGGGAGGAGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCA-AATCCCAGCTGTCAGTCCCAAGACCCGCCCAGACATCCCCATCAGTCAGCTCAGAGATGCTGT-----TCTCCATC-CCCAGGTGCCTGGG----GGTGGCCCCTTGTCCCCAGTG--AGCAGGAGCAACCTGGGACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845115 221 - 106955855 GATCACACAGTCTGGCTCAGCCCAGGTGGTGGGTTTAGGGAGGGGCCTTGAAATGAAATCACAGGTTGGGTCCCAAGATACTAATGCATCCCTCA-AATCCCAGCTGTCAGTCCCAAGACCCGCCCAGAAGTCCCCATCAGTCAGCTCAGAGATGCTGT-----TCTCCATC-CCCAGGTGCCTGGG----GGTGGCCCGTTGTCCCCAGTG--AGCAGGAGTGACCTGGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55217382 217 + 59248254 GATCACAGAGCCTGGCTCAACCCAGAGGGCGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGTCCCT-CAGCCCTCA-GATCCCAGCTCCCAGTCCCAGGACCC-TTCAGATGTCGCCATCAGTCA-CCCAGAACTGCTG------TCTCCTCC-CCCAGCTGCCCATG----GGTGGCCCTTTGTCCCCAGTG--AGGAGGAGGGACCTGGGACA i macFas5.chr19 C 0 T 98248 s papAnu2.chr19 47325073 217 + 51301725 GATCACAGAGCCAGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGTCCCT-CAGCCCTCA-GATCCCAGCTCCCAGTCCCAGGACCC-TTCAGATGTCGCCATCAGTCA-CCCAGAACTGCTG------TCTCCTCT-CCCAGCTGCCCATG----GGTGGCCTTTTGTCCCCACTG--AGGAGGAGGGACCTAGGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017021 215 + 50890351 GATCACAGAGCCTGGCTCAGCCCAGAGGGCGGGTTTGTGGAGGGGCCCTGGAAGGAAATCAGAGGCTGGATCCCAAGATGTCCCC---ACACTCA-GATCCCAGCTCCCAGCCCCAGGACCC-TTCAGATGTCACCATCAGTCA-CCCAGAACTGCTG------TCTCCTCT-CCCAGCTGCCCATG----GGTGGCCCTTTGTCCCCAGTG--AGGAGGAGGGACCTAGGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565053 205 + 49145316 GATCACGGGACCCGGCTGGGCCCACAAGATGGGTTGGAGTAGTTTCTCTGGGAGGAAATCACAGGTTAGGCCCCAAGATGTCCC--CACCCCTCA-GATCCCAGCTCTCAGCCCCAGACCCC-TCCAGACATCCTCATCAGTCA----------GCTTT-----TCTCCATC-CCCAGCTGCCCAGG----GGTGACCCCTTGTCCCCAG-----ATAGGAGGGACCTGGGACA i calJac3.chr22 I 403 C 0 s mm10.chr7 3799539 214 + 145441459 GACCACAGAATCTGGCTGTACTCTGAGGATAGGCTTAGGGAGGGACCCTGCAAGTAACAGAGCAACTAGGACTCAGGACAAACA-----CACTCA-GATTGCAGTCCTTAACCCCATGACCT-TCCCGCCACCCACAGGACTCA-CACACAGTAGGTGT-----TTTCCACC-ATTA-CAGCCCAGGAACTGAAGATCCTGGATCTGAAG-----AAAAGAGCATTTCAGGTCA i mm10.chr7 C 0 C 0 s canFam3.chr1 102776083 210 + 122678785 GACCATGAGGTCTGAGTCAGCCCAAATGGAGGGTTTGGGGAGGGTCCCTGGAAAGGAATCAGATGGAGAGTTGCAAAGGTACCCTTCTCCCCTCATTTTCCCAACTGTCCATCCAAGGCCCC-TACAACACTGGTCACCAGCAG-CCCTGACCCTCTCTGACCCTCTCTGCCTCCCAGCTGTCCAGA----GC--GCCTGTTG-----AGTGGAAGCAGGAGG----------- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3757269 74644 - 64156825 I a score=65860.000000 s hg38.chr19_GL949753v2_alt 280315 24 + 796479 GCTGGGGACAGACTCACCTGCCTG s panTro4.chr19 59234298 24 + 63644993 GCTGGGGACAGACTCACCTGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063389 24 + 60714840 GCTGGGGACAGACTCACCTGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845336 24 - 106955855 GCTGGGGACAGACTCACCTGCCTG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47325290 24 + 51301725 GCTGGGGACAGACTCACCTGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017236 24 + 50890351 GCTGGGGACAGACTCACCTGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565258 24 + 49145316 GCTGGGGACAGACTGACCTGCCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3799753 24 + 145441459 GCTGCAGACACACTCACCTGTCAG i mm10.chr7 C 0 C 0 s canFam3.chr1 102776293 23 + 122678785 TCTGAGGA-GGACTTACCTGCCTG i canFam3.chr1 C 0 T 14622 e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=167661.000000 s hg38.chr19_GL949753v2_alt 280339 63 + 796479 CACATGGGTCCTGAAGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCT s panTro4.chr19 59234322 63 + 63644993 CACATGGGTCCTGAAGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063413 63 + 60714840 CACATGGGTCCTGAGGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAAATTTGCCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845360 63 - 106955855 CACGTGGGTCCTGAGGCTCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47325314 63 + 51301725 CACACAGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAATTCCCTGTGAGGGATTTGCCCCT i papAnu2.chr19 C 0 T 30676 s chlSab2.chr6 47017260 63 + 50890351 CACGTGGGTCCTGGGGCCCAGACTCAGACCTGGAAGAGAGTTCCCTATGAGGGATTTGCCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565282 63 + 49145316 CACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTCCCAGTGAGAGATTTGTCCCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3799777 63 + 145441459 CACTGGGATCCAGAGGCTCAGAGTCAGTCCTGGAAGAGAGTTCTTTGTAAGAGGTTTGTCCCT i mm10.chr7 C 0 C 0 s canFam3.chr1 19746056 61 - 122678785 CACTCGCGTCCTGGAGCTCATACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTGCCTC- i canFam3.chr1 T 1378 C 0 e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=38540.000000 s hg38.chr19_GL949753v2_alt 280402 32 + 796479 GAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAG s panTro4.chr19 59234385 32 + 63644993 GAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063476 32 + 60714840 GAAGCCTGAGCAGTTTCTCCCCCACCTGTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845423 32 - 106955855 GAAGCCTGAGCAGATCCTCCCCTGCCTGTGAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017323 31 + 50890351 -AAACCTGAGCAGACCCTCCCCGCCCTGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565345 32 + 49145316 AAAGCCGGAGCAGGTCTTCTTCTTTCCTTGAG i calJac3.chr22 C 0 T 15265 s mm10.chr7 3799840 22 + 145441459 -AAGGCTGAGCAAGTCTGC---------AGAA i mm10.chr7 C 0 I 1 s canFam3.chr1 19746117 32 - 122678785 AAATCCTGAGCTGAACCCCTCCTCTCCATGAG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47325377 30676 + 51301725 T e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=4692.000000 s hg38.chr19_GL949753v2_alt 280434 3 + 796479 CAT s panTro4.chr19 59234417 3 + 63644993 CAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063508 3 + 60714840 CAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845455 3 - 106955855 CAT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017354 3 + 50890351 CAT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3799863 3 + 145441459 CAT i mm10.chr7 I 1 C 0 s canFam3.chr1 19746149 3 - 122678785 CCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565377 15265 + 49145316 T e papAnu2.chr19 47325377 30676 + 51301725 T e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=6541.000000 s hg38.chr19_GL949753v2_alt 280437 6 + 796479 CCTGAC s panTro4.chr19 59234420 6 + 63644993 CCTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063511 6 + 60714840 CCTGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845458 6 - 106955855 CCTGAC i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47017357 6 + 50890351 GCTAAC i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45550112 6 + 49145316 CCTAGC i calJac3.chr22 T 15265 C 0 s mm10.chr7 3799866 5 + 145441459 -CTGAG i mm10.chr7 C 0 I 1 s canFam3.chr1 19746152 5 - 122678785 CCTGA- i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47325377 30676 + 51301725 T e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=398762.000000 s hg38.chr19_GL949753v2_alt 280443 283 + 796479 CCCTGAGATTTCCTGATAGACCAGGGCTTGGCTCTGGAGTTAAGTCCCTTCAAGACTAGGGTGCCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGTTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTACAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAG-ACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGGAACTG-------------CAGAAGCCTGGCTCTCATTTCCCCA s panTro4.chr19 59234426 283 + 63644993 CCCTGAGATTTCCTGATAGACCAGGGCTTGGCTGTGGAGTGAAGTCCCTTCAAGACTAGGGTGCCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGTTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTACAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAG-ACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGAAACTG-------------CAGAAGCCTGGCTCTCATTTCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063517 282 + 60714840 CCCTGAAATTTCCTGATAGACCAGGGCTTGGCTGTGGAGAGAAGTCCCTTCAAGACTAGAGTG-CCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGCTGTGAGGGTGGGAGTCACGGCATCTCCTCCCACTGGCCCCAGCTGTGCAGATGGATGAAACCATGGTGTCCAGGAGGACAGACAG-ACACA-------------CTCAAAGGCTGGGTTCTCCCTGTCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGAGAACTG-------------CAGAAGCCTGGCTTTCATTTCCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845464 277 - 106955855 CCCTGAGATTTCCTGATAGACT-TGGCTTGGCTGTG-----AAGTCCCTTCAAGACTAGGGTGTCCC-TTCTCCTCTTGAAATCTCACCAAGTCAGAGTAGGGCTGTGAGGGTGGGGGTCATGGCATCTCCTCCCACTGGCCCCGGCTGTGCAGATAGATGAAACCACAGTGTCCAGGAGGACAGACAG-ACACA-------------CTCAAAGACTGGGTTCTCCCTATCATGGGGTTGTCCCATCAGCAG-----CCCCACAGGAAGGGGAACTG-------------CAGAAGCCTGGCTCTCATTTCCCCA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47294701 306 + 51301725 CCCTGGGGTCTCCTACCGGACCAGGGCCTACCTGTGGGGCAAGGTCCCTCTCATGCTAGAACCTCCCATTCCCCTTGTCAAATCTCAATGAAGTGAACCATGGCCTTGGGCATGAGAGTCATGGCGTCTCCTCCTACTGGCCCCGGCCGTGCGGGTGGATAAGACCACGGTG-CCCAcaggacag--ag-acacacagggccTGGGCACATAGAAGCAATGTTCTCCCACTTACTGGATTTTCCCACCAGCAT-----CTCC-ACGGGTGGTGAACTGTCCCGGACCCCGCCACGAGCCCGGCTCTTGTTTTCCCA i papAnu2.chr19 T 30676 C 0 s chlSab2.chr6 47017364 303 + 50890351 CCCTGGAGCTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCC-TTCCCTGCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAACCCTCGGTG-CTGGCAGGACAGACAC-ACACACAGGGTGTGGCTGCTCGGAGGCTGGGTCCTTCTTGTCATGGGATTGTCTCATCCTCAG-----CCCA-CAGGAAGGGGAACTGCCC----TCCCCCCGGGAGCCTGGCTCTCATTTCCCCA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45550118 292 + 49145316 CCCTGGGGTCTCCTACTGCACCAGGGCCTACCTGCAGGGCAGAGTCCCCCTCATGTTAGAA-------TTCCCCTCGTCAGATCTCAGTGAAGTGGGCCATGGACATGGGTGTGAGAGTCATGGGGTCTCCTGCTACTGGCCCTGGCTGTGCAGATGAAAGAGACCATGGTGTCC------ACAGA----ACACACAGGGTGTGGGCACACAGA-GCCATGATCCCCTGCTTACAGGATTTTTCCATAAGCAT-----CTCC-ATGGGTAGCAAACCATCCCCCCCACAACCACAAGCCTGGCTCTTGTTTTCCCA i calJac3.chr22 C 0 C 0 s mm10.chr7 3799872 299 + 145441459 CCCTGGGGTTTCCTTTTGGGTGAGTGCTGGTCTACAGGCCATGATCATTTCTAGACCTCAGTATCCCCTCCCTCTCTTCACATCTCACCAAGGCAGAGCCGGGCTGTGAAGGTGCAGGACATGGCATCTCACCTCAGTGGCTGCAACTGTGCTTGAGGCCAGAGCTACAGAGCCTTTCTGAAGCGATTGTGTACA--GGGTGTGGC--ACTGGAGGCAGGGCAGTCCCCATGACATGTTCATAT-ATCAGCCA-----CCCCACAAAAAGAGGACCTG-------CCCTCCTAAGCACCATGCTCTGACTTCCTCA i mm10.chr7 I 1 I 16630 s canFam3.chr1 19746157 289 - 122678785 GCCTGAGATCT-TTGGCAGACCAGGACCTGGCTGTGGGAT-GGGTCCCTCCCAGACTAGGGTGTCCC-CTCCCCTCCTCAGATCTCACTTAAACAGAGCAGGGCCATGAGGGTGGGGGTCATGGTGTCTCCTGTCTTTGGCCCTGGCCCTGCAGAT-GATAGGACCATGAGG-CCCAGAGGATAGGCAG-ACGCACAAGGTGTGGGTACTTGGAGGCCA-GTCTTACCCATAATGGGGTTGTCACATTAGCAGGATGTGACTACAGGAAGGGGAAC--------------------ACCCGGTCCCCAGGTCCCCT i canFam3.chr1 C 0 C 0 e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=3563.000000 s hg38.chr19_GL949753v2_alt 280726 3 + 796479 GGG- s panTro4.chr19 59234709 3 + 63644993 GGG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063799 3 + 60714840 GGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845741 3 - 106955855 GGG- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47295007 3 + 51301725 GGG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017667 3 + 50890351 GGG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550410 3 + 49145316 GGG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746446 3 - 122678785 -AGC i canFam3.chr1 C 0 T 23788 e mm10.chr7 3800171 16630 + 145441459 I e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=33145.000000 s hg38.chr19_GL949753v2_alt 280729 42 + 796479 C---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTTCCTGAAGACATTTCAG s panTro4.chr19 59234712 42 + 63644993 C---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTCCATGAAGACATTTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063802 42 + 60714840 C---------------------------------TGAGGTG----------------------------------------------------------GGAGTGAGTATCAGGTTCCCTGAAGACATTTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845744 42 - 106955855 C---------------------------------CGAGGTG----------------------------------------------------------GGAGTGAGCACCAGGTTCCCTGAAGACATTTCAG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47295010 133 + 51301725 CTTGGACTTTCTTGAAGGCTTtatctgcctctattgagatgatcatatggttttcgTTCTTAGTTTATGTCGTGAGTCACGTATCTTGAACCATCCTTTGAGACAGGCACCGGGCTTTCTGCTGATATTTCAG i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47017670 42 + 50890351 C---------------------------------TGAGGTG----------------------------------------------------------GGGGCGGGCACCAGGCTCTCTGCAGACATTTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550413 42 + 49145316 C---------------------------------TTGGGCT----------------------------------------------------------GAGACAGGCACCAGGTTTTCTGCTGATATTTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19722661 42 - 122678785 C---------------------------------TGAAGGG----------------------------------------------------------TGGCCCAACAGCAGCAGGCCTTGGAGCCTTGCAG i canFam3.chr1 T 23788 C 0 e mm10.chr7 3800171 16630 + 145441459 I e macFas5.chr19 55217599 98248 + 59248254 T e rheMac3.chr19 3757269 74644 - 64156825 I a score=34292.000000 s hg38.chr19_GL949753v2_alt 280771 24 + 796479 -ACAGAAATGGGCTCCCCCTGATCC s panTro4.chr19 59234754 24 + 63644993 -ACAGAAATGGGCTCCCCCTGATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063844 24 + 60714840 -ACAGAAATGGGCTCCCCCTAATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845786 24 - 106955855 -ATAGAAATGGGCTCCCCCCGATCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119351 22 + 59248254 ---AGGAGTGGGGTCTCCCTAGCCC i macFas5.chr19 T 98248 C 0 s papAnu2.chr19 47295145 24 + 51301725 -ACACAAGGCATCTCTCCTGATCTC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47017712 24 + 50890351 -AGAGAAATGGGGTCTCCCCGTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550455 24 + 49145316 -ACAAACATGGGATCTCCCTGATCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19722703 25 - 122678785 ACCAGATGTGAGTTTCCCCGGATCC i canFam3.chr1 C 0 I 23728 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=42119.000000 s hg38.chr19_GL949753v2_alt 280795 35 + 796479 TTGGCTACTGGCTGCAGGATCTTTCCTCATCTTAT s panTro4.chr19 59234778 35 + 63644993 TTGGCTACTGGCTGCAGGATCTTTCCTCATCTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063868 35 + 60714840 TTAGCTACTGGCTGCAGGATCTTTCCTCATCTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845810 35 - 106955855 TTGGCTACTGGCTGCAGGATCTTTCCTCATCTTAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119373 32 + 59248254 T-GGCCCCTG--TGCCTGATCCTTCCTCCTCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47295169 34 + 51301725 C-TTTCGCTGTCTGCCCGACCGGTCCTCATCTCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017736 35 + 50890351 TGGGCCACTGTCTGCCTGATTTATCTTTATCTCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550479 35 + 49145316 CCTTTCACTGTCTGCCGGACCTGTCCTCATCTCAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19722728 23728 - 122678785 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=273991.000000 s hg38.chr19_GL949753v2_alt 280830 176 + 796479 TGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAGGGCCTCCCTGAGTGAGCCTCTTCCAGGTGAGGGTAACTGAGGGCTTCTCTTCCCC-TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTGGGGTCCTTACCATGGCCAGTCATC s panTro4.chr19 59234813 176 + 63644993 TGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAGGGCCTCCCTGAGTGAGCCTCTTCCAGGTGAGGGTAACTGAGGGCTTCTCCTCCCT-TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTGGGGTCCTTACCATGGCCAGTCATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56063903 166 + 60714840 TGAGGGCTAAGATGTAGTAGAAAAATGGGCCCAGGGCCTTCCTGAGTGAGCCTCTTCCAGGTGAGGGTAACTGAGGGCT-----------TCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCACGGGGTTGTTGGGTCCTTACCATGGCCAGTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102845845 177 - 106955855 TGAGGGCTAGGATGTAGTAGAAAAATGGGCCCAGGGCCTCCCTGAGTGAGCCTCTTCCAGGTGAGGGTAACTGAGGGCTTCTCTTCCCCATCTCAGAGCCT-CCACATGGGGTCTCCTTTACTCCTTCATCCTGTCTATCAGCATGGGGTTGTGGGGTCCTTACCATGGCCAGTCATC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55119405 173 + 59248254 TGAGAGCCGGGACCTCACAG-CAAACACAC-CGGTGCCTTCCGGAGTCCTCCCCTTCCAGGTGAGGGTGGCCGAGGCCTCCTCCTCCCA-TGTCAGAGCCT-CCCCATGGGGTCTCCCTCACGCCTGCAGCCCGTCCGTCCACACATCACTCTGGGT-CCTTTCCAGAGTCAGTCACC i macFas5.chr19 C 0 I 98724 s papAnu2.chr19 47295203 174 + 51301725 TGAGGGCCAGGATGTAGCTG-CAAATGGACGTGGTGCCTTCCTGAGTTGGTCCCTTCGAGGTGAAGGCAACAGAGGGTTCTTCCTTCC--TCTCAGAGCCT-CTCCGTGGGGTCCCGCTCTCTCCTTCGGCTCACCCGTAAACACACCCTTGTGGGGAACCTACCACGGCCAGTCTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017771 173 + 50890351 TGAGGGCCGGGACACAGCAG-CAAATAGACCCAGTGACTTCCTCAGTCAGCCCCTTTCAGGCGAGGACGACCATGGGCTCCTCTTCCC--TCTCAGAGCCT-CCCCATGGGGTCTCCCTCCCTCTTTCAGCCCGTCCATCGGCTCAGCGTCGCGGGGTCCTTACCATGG-CAGTCGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550514 174 + 49145316 TTATGGCCAGTAGGTAGCTG-CAAATGGATGTGGTTCCTTCCTGAGTTGGTCCCTTCCAGGTGAAGGCAATGGAGGACTCTTCCTTCC--TCTCAGCACCT-TCCCGTGGGGTCTCACTTTCTCCTTCAGCTCATCCATAAGCATATCCTTGTGGGGTTCCTGCCACAGCCAGTCCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746456 155 - 122678785 TGAGGTCTATGATGGTGCAG-CCAGTGATTCCTGAGACTTTCTCAGAT-GTCCTGTCCAGGTGAGGA-GACCAGGGCATGTACTTCCC--TCCCAGAGCCTCCCCCATGGGGT----------TCTTTAACC------TTAGCACATCCC--TGGGGTTCTGATCATGGATGGGGTCC i canFam3.chr1 I 23728 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=188868.000000 s hg38.chr19_GL949753v2_alt 281006 91 + 796479 TCATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGTCCATGGTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACATCAGGCTGTG s panTro4.chr19 59234989 91 + 63644993 TCATCCGTCATGGAGATGCTTCAGGGAAAATGCAGGTCCATGGTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACATCGGGCTGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064069 91 + 60714840 TCATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGTCCATGCTGCAGGGCAGA-CTCAGGTCAGCAGAGACGCATCTGACACCTGGCTGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846022 91 - 106955855 TTATCCGTCGTGGAGATGCTTCAGGGAAAATGCAGGACCATGCCGCAGGGCAGA-CTGAGGTCAGCAGAGACGCATCTGACATCTGGCTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218302 90 + 59248254 TCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTG i macFas5.chr19 I 98724 C 0 s papAnu2.chr19 47295377 91 + 51301725 TCACCAGTGCTGGGGAAGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTCCTCTCACGTCTGGCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017944 90 + 50890351 TCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA-GGCAGA-CCCAGGTCAGCAGAAACGCACCTGACACCGGGCTGTG i chlSab2.chr6 C 0 I 40010 s calJac3.chr22 45550688 91 + 49145316 TCAGCAGCCCTGGGGGGGCTTCAGGGAAGATGCAAATTCAGGCTGCAGGGCAGA-CTCAGATCAGCAGAGACTCACCTCACATCTGTCTGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746611 87 - 122678785 ---CCAGGCCCAGAAATGCTTAAGGGGACATG--GGTTCCTGCTGTGCTGTGGAGCTCATGTCAGCACAGATAGACGTACAATATCTCTGCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=167850.000000 s hg38.chr19_GL949753v2_alt 281097 218 + 796479 TAGTTCAAGTTGAGCTGCACTGTGGCAATGAGCGCAATGGAGAAACACA-GGAAATATGGGTAGAGAACACGAC-CT-GTATCCAACACTGCCA-----GTTTGCTCTAT--CAACCCGTGCCCTCCATGGACTTTCCCTTT-CTCTTA-----------------------GCAGCAGTATCCAC-----CTTCGTCTCCTTGGAAACAGACTTGTGATCCACTCCTGAGTCTTCAGTG-TCCTTTGTTTC---------------------------CCTGAG s panTro4.chr19 59235080 218 + 63644993 TAGTTCAAGTTGAGCTGCACTGTGGCAATGAGCGCAATGGAGAAACACA-GGAAATATGGGTAGAGAACACGAC-CT-GTATCCAACACTGCCA-----GTTTGCTCTAT--CAACCCGTGCCCTCCATGGACTTTCCCTTT-GTCTTA-----------------------GCAGCAGCATCCAC-----CTTCGTCTCCTTGGAAACAGACTGGTGATCCACTCCTGAGTCTTCAGTG-TCCTTTGTTTC---------------------------CCTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064160 218 + 60714840 TAGTTCAAGTGGAGCTGCATTGTGGCAATGAGCGCAATGGAGAAACACA-GGAAATATGGGTAGAGGACATGAC-CT-GTATCCAACACTGCCA-----GTTTGCTCTAT--CAACCGGTGCCCTCCATGGACTTTCCCTTT-CTCTTA-----------------------GCAGCAGCATCCAC-----CTTCGTCTCCTTGGAAACAGACTTGTGATCCACTCCTGAGTCTTCAGTG-TCCTTTGTTTC---------------------------CCTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846113 218 - 106955855 TAGTTCAAGTTGAGCTGCATTGTGGCAATGAGCGCAATGGAGAAACACA-GGAAATATGGGTAGAGGACATGAC-CT-GTATCCAACGCTGCCA-----GTTTGCTCTAT--CAACCAGTGCCCTCCATGGACTTTCCCTTT-CTCTGA-----------------------GCAGCAGCATCCAC-----CTTTGTCTCCTTGGAAACAGACTTGTGACCCACTCCTGGGTCTTCAGTG-TCCTTTGTTTC---------------------------Ccggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55218392 239 + 59248254 CAGCCCAGGCTGAGCTGTGA-GTGGCAGTGAGAACACAGGAGAAATGCAGGGAAATAGGGGAAGAAATCATGAC-CC-TTTAGTGGCCCTGGAGT----GTTTCTTTTCTAACCAATAGTACTCt--------ttttcttttacttctcttaattttttttttgttttttttGCAACAGAGTCTACTTCCACCCCACCTCC---GGAACAAACCTCTGAATCATTTCTGCCTCCACTGTG-CCTTTTGTTTC---------------------------TTTGGG i macFas5.chr19 C 0 I 38480 s papAnu2.chr19 47295468 228 + 51301725 CAGTTCCAGTTGAGTTTCACTGTGGCAATGAGCAGAAAGCGGAAATACAGGGACGCAAGGGAAAGAATCGTGAC-CCTTTTCCCAGAACTGGAGTGTGAGTTTTCTTTATGCAAAAAAGTTCCCTTCACGAACTTCTCATTTACTCATC-----------------------GCAAC--GGTCACCCAcccccccGTCTCCCTGGAAACAA--CATTGACCTGACTCTGCCTTCTTGGTGccccccccTTTC---------------------------TTTC-- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45550779 217 + 49145316 CAGTTTCCTTTGTGCTTCATTGCTGCAATGAGCA-AAAGAGGAAATATAGGGAAATAGGG--AAGAATCACGACTCT-TTTCCCAGAACTGGAATGTGGGTTTTCTTTATGCAAAAATGTTCCCTTCACGAACTTCTCCTTA-GTCGTC-----------------------ACCACAGCCTCCAC-----CTCCATCTCCCTGGAAACGT-----TGACCTGATTCTGCCTTCTTGGTG-CCCCCGTTTAC---------------------------TTTC-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19746698 242 - 122678785 CACCTCAGATCTAGGT-CACCACGACAATGAACCCAA---AGAAATGTAGGCAAATAGGGAAAGAAACACAGCC-CC-TCTCCTGACCCCAGAGCCTGGGCTTTCTTTCT--AACACAG---CCTCCATGGACTTCTCTTTT-TTCCT------------------------GTGCCATTGTCCAT-----ATCC-CCTTTATGGGAACACAGCCTTGAGTCCCTCCCAGCACATCATTG-CCCCTTGTTCCTGGGGCAGAGCCATCCTCTCCATCCATCCTGGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e chlSab2.chr6 47018034 40010 + 50890351 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=278978.000000 s hg38.chr19_GL949753v2_alt 281315 362 + 796479 ---------GGGAACT--------CACCTGTT--------------------------------------------GGGAT------------------GGGGAGCTGAT-TTTTACTTAATGATTgct-cattatctg-ctgcccatgtgaccttgagccttcacaaccccttctctgagcctcagtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGGGTCGT-GGGGGTCGGCGGTGACTGG----GACTTCGAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACAT--AGGGTTGTAAATTTGAGAAAATCAGGGTGT---TGGACA------------ATTGACGCTCCCACCCAAGAATCCTCATCTACCCTGAGCACTA-AGAAATTGTACATATAATATTGCTTAAATACACAGATTATCACAGTCATGAGTAGAAA s panTro4.chr19 59235298 361 + 63644993 ---------GGGAACT--------CACCTGTT--------------------------------------------GGGAT------------------GGGGAGCTGAT-TTTTACTTAATGATTGCT-CATTATCTG-CTGCccatgtgaccttgagccttcacacccccttctctgagcctcagtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGGGTCGT-GGGGGTCGGTGGTGACTGG----GACTTCGAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACAT--AGGGTTGT-AATTTGAGAAAATCAGGGTGT---TGGACA------------ATTGACGCTCCCAGTCAAGAATCCTCATCTACCCTGAGCACTA-AGAAATTGTACATATAATATTGCTTAAATACACAGATTATCACAGTCATGAGTAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064378 361 + 60714840 ---------GGGAACT--------CACCTGTT--------------------------------------------GGGTT------------------GGGGAGCTCAT-TTTTACTTAATGATTgct-cattatctg-ctgcccatgtgaccttgagccttcacacccccttctctgagcctcagtttccttgtgtggagcaagttgttacacaccccactcatcagaggggtcgt-gggggtcaGTGGTGACCGG----GACTTCAAAGGAGCTCAGTGATGGTTAATTCCAAGGACAGAGTAAGACAT--AGGGTTGT-AATTTGAGAAAATCAGGGTGT---TGGACA------------ATTGACACTTCCACTCAAGGATCCTCATCTACCCTGAGCACTA-AGAAATGGTACATATAATATTGCTTAAATACACAGATTATCACAGTCATGAGTAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846331 361 - 106955855 ---------aggaact--------cacccatt--------------------------------------------gggat------------------ggggagctgat-ttttacttaatgattgct-cattatctg-ctgcccatgtgagcttgagccttcacacccccttctctgagcctcagtttccttgtgtgGAGCAAGTTGTTACACACCCCACTCATCAGAGGAGTCGT-GGGGGTCGGTGGTGACCGG----GACTTCAAAGGAGCTCAATGATGGTTAATTCCCAGGACAGAGTAAGACAT--AGGGTTGT-AATTTGAGAAAATCAGGGTAT---CGGACA------------ATTGACGCTCCCACTCAAGGATCCTCATTTACCCTGAGCACTA-AGAAATGGTACATATAATATTGCTTAAATACACAGATTATCACAGTCATGAGTAGAAA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47295696 428 + 51301725 -----------AAACA--------CTCCTGTTCCCATCCTGCGCTCCTGCGTTCAAGGTTGTGGGACA-ATACATAGGGTT-AGCACTCTGATTTGAGGGGAAATCTcgt-ctttatttaaatattcatgtgTTACCCC-ttgcctgtgtgaccttgggcagtaac-ttcccatctctgagcctcagtttcctcatttggagC---CTGTCATGAACTCCATTCCTCACAGGGGAGCT---GGGTCATTGGTGCCTGG----GAGCTGCACGGGGCTCAGCCATGGGTAATTTCCAGAGCAGGTGAAGACAGGAGAGGTGGG-GGCGTGAGGGGATGCTGGCGC---CCACCATCAAGGCCTGTGATTGAGGTTTGCACTCAGGAGTACCCGTTTGTTCCTGTCCTTG-AGAGATGCTTCTCATAATATTTCATCAACACCCCGATTATCACAGTCATGTGCAGAAA i papAnu2.chr19 C 0 I 52136 s calJac3.chr22 45550996 426 + 49145316 -----------AAACA--------CTCCTATTCTCATGTTTTGCTCCTGTGTTCTGGTTTTGGGACAATACAT---GGGTTTAGCACTCTGATTTGAAGGGAAATCTCAT-CTTCATTTAAATATTCATGTAAcacctc-ctgcccgtgtgaccttg-gctgtgac-ctcccatttctgagcctgagtttcctcatttgAAGC---CTGTCATGAACTCCATTCATCACAGCGGAGCT---GGGTCATTGGAGTCTGG----GAGCTGCACGGGGCTCAGCCACGGGTGATTTCCAGAGCAGGTGAAGACATGAGGGGCGGG-GACATGAAGGGATGCTGGTGTGCATGCTCA---AGGCCTGTGACTGATGTTTCCACTCAGGATCCCCTCTTCGTTCCTACCCTTG-AGAGATGTTTCTTACCATATTTCATCAACACCCCAGTTGTCATGGTCATGTGCAGAAA i calJac3.chr22 C 0 I 16310 s canFam3.chr1 19746940 379 - 122678785 GTCCTGTCTGTAAGCTGTATGGAGCACATATT--------------------------------------------TGGTTTAGAGCTCTGATTTTGAAGAAAAACTTATCCTTTATCTAAATATTCATCTATTATCCATTTGTCTATGTGACCCAGGGTGATAAT-ATCCTGTCTACAAGTCTTA--------------------TTGTCCTGAACCCCACTCCTCAGAGTAGTTGCGGGGGGTCAGTGGTTCCTAGTTCAGGGGGGAGGGGGAATCCATCACTGTTAGTTTTCAGAACAGGTTAA---ATG-GAGTTTGG-TACATG-GGAGATTATGGGGT---CAGACC--------CATAATT--TGGACCCAGTCAAGACTCCTCATGGACTCCACATACCACATAAGTGCTACTGACCATATTTCTGAAGTGTGTAGAG----ATAGTCATATGCAGGAA i canFam3.chr1 C 0 T 28289 e mm10.chr7 3800171 16630 + 145441459 I e chlSab2.chr6 47018034 40010 + 50890351 I e macFas5.chr19 55218631 38480 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=28512.000000 s hg38.chr19_GL949753v2_alt 281677 116 + 796479 tcctt----------------------------ccttccttccttccttccttccttccttccttcctccctccctccctcccttctct-----------------------ccctccctccctcactccccccctTTCTTTCTTTCTttctttcttctttcctt---tt- s panTro4.chr19 59235659 93 + 63644993 tcctt----------------------------ccttctttccttccttccttccttcctccctccctccctccctCACTC-----------------------------------------------CCCCCCctttctttctttctttctttcttctttctttc--ct- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56064739 95 + 60714840 tcctt----------------------------ccttccttccttccttccttcctccctccctctctcccttctctccct-----------------------------------------------ccctccctctctctctTTCTTTCtttcttctttctttccttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102846692 171 - 106955855 tccttttttccttcctccctccctccctccctcccttccttccttccttccttccttccttccttccttccttcctctctctctcttcttttcctttcctttcctttctttctcctttctttctttctttctttctttctttctttctttctttctttcttctttcttctt i nomLeu3.chr10 C 0 I 789 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e papAnu2.chr19 47296124 52136 + 51301725 I e macFas5.chr19 55218631 38480 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=44821.000000 s hg38.chr19_GL949753v2_alt 281793 95 + 796479 tttttttttttgacagagtctcactctgttgcccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg s panTro4.chr19 59235752 95 + 63644993 tttttttttttgacagagtctcactctgttgcccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg i panTro4.chr19 C 0 I 735 s ponAbe2.chr19 56064834 95 + 60714840 tttttttttttgacagagtctcactctgttacccaggctggagtgcagtggcacaatcttggctcactgcaaccaccatctcctgggttcaagtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102847652 95 - 106955855 tttatttttgagatggagtcttgctctgtcagccaggctggtgtgcagtggcatgatcttggctcactgcaacctctttctcccaggttcaagca i nomLeu3.chr10 I 789 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e papAnu2.chr19 47296124 52136 + 51301725 I e macFas5.chr19 55218631 38480 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=8622.000000 s hg38.chr19_GL949753v2_alt 281888 15 + 796479 attctcctgcctcag s panTro4.chr19 59236582 15 + 63644993 attctcctgcctcag i panTro4.chr19 I 735 C 0 s ponAbe2.chr19 56064929 15 + 60714840 attctcctgcctcag i ponAbe2.chr19 C 0 I 727 s nomLeu3.chr10 102847747 15 - 106955855 attctcctgcctcag i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e papAnu2.chr19 47296124 52136 + 51301725 I e macFas5.chr19 55218631 38480 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=458459.000000 s hg38.chr19_GL949753v2_alt 281903 937 + 796479 cttcctgagtagctgggactacaggggcatgccaccgcacctggctaatttcttttgtattttagtagagatggggtttctccatgttgcccaggttggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccacgcccagtcgaaggactagtttttaattccggttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTGCCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCGGATAAAGCAATTGTCatatatatatacacacatacacacacacatatatacatctatacatatacacatatatatacatatacacacatatatacgcatatatacat--atatacacacacatatatacatatatatatgtatacacgcacacacacaAAtatatatacactgtggaatactactcagccataagagggaacaaaataatggcattcatagtgacctggatgaaattggagactattattctaagtgaagaaattcaggaatgaaaaaccaaatattttatgttctcattcctaagtgggagctaagctatgaggatgcaaaggcataagaatgctacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaatcgggtttaatgtatactactagggtgatgggtgcacaaaaatctcagaaatcatcactaaagaacttctgcaagtaaccaaacaccacgttccccaaaaaccta s panTro4.chr19 59236597 935 + 63644993 cttcctgagtagctgggactacaggggcatgcctccgcacccggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccagtttggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccgtgcccagtcgaaggactagtttttaattccggttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTGCCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGTGGATAAAGCAATTGTcatatatatatacacacacacacacacacatata--catctatacatatacacatatatatacatatacacacatatatacacatatatacatgtatatacacacacatatatacatatatatatgtatgcac--acacacacatatacatatacactgtggaatactactcagccataagagggaacaaaataatggcattcacagtgacctggatgaaattggagactattattctaagtgaagaaattcaggaatgaaaaaccaaatgttttatgttctcattcctaagtgggagctaagctatgaggatgcaaaggcataagaatgctacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaatcgggtttaatgtatactactagggtgatgggtgcacaaaaatctcagaaatcatcactaaagaatttctgaaagtaaccaaacaccacgttccccaaaaaccta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56065671 894 + 60714840 cctcctgagtagctgggactacaggggcatgccaccgcacctggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccaggttggtcttgaactcctgagctcagacaatccgcccgactcgccctcccaaagtgctaggattacaggcgcgagcaaccgcgcccggtcgaaggactagtttttaattccagttctggctgtctggttggttctggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccgttaatccaaaattgccacctcactttcatcagtaggtggtatcttaggccATCTTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTACCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCGGATAAAGCAATTGTCatatatatatatatacacacacacacacatata------tatacatatatacatata------------------------catatatacat--atatataaatatatatatacatatttatacatatatac--acacacac-----------cactgtggaatactactcagccataagaaggaacaaaataatggcattcatagtgacctggatgaaattggagactattattctaagtgaagtaattcaggaatgaaaaaccaaatgttttatgttctcactcttaagtgggagctaagctatgaggatgcaaaagcataagaatgttacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaattgggttcagtatgtactactagggtgatgggtgcaccaaaatctcagaaattatcactaaagaacttctgcaagtaacctaacaccatgttccccaaaaaccta i ponAbe2.chr19 I 727 C 0 s nomLeu3.chr10 102847762 877 - 106955855 cttcctgagtagctgggactactggtgcatgccactgcacccggctaatttcttttgtattttagtagagatggggtttcaccatgttgcccaggctggtcttgaactcctgagctcaggcaatccgcccgcctcgccctcccaaagtgctaggattacaggcgtgagcaaccgcgcccagtcaaaggactagtttttaattccagttctggctgtctggttggttttggttttcctcatgtatgtttgctgagaggatctatgtagttgcctgtgatgcccattaatccaaaattgccacctcgctttcatcagtaggtggtatcttaggccATCGTTATATAAGAGTAACTTTTTTTTCACTTTTTGGAAAATATTTTATTTACCAAAATACATTTGAGAAAAATAATGTTGATTATACAAGCAGATAAAGCAATTGTcatatatatatatatacacacacacacatatata------tatacatatatacatata------------------------cacatatatat--------------------acacatatataaataCACAC--ACacacac----------acactgtggaatactactcagccataagaaggaacaaaataatggcattcacagtgacctggatgaaattggagactattattctaagtgaagtaattcaggaatgaaaaaccaaatattttatgttctcactcttgagtgggagctaagctatgaggatgcgaaagcataagaatgttacaatggactttggggactcgggggaaagggagggaggaggtgagggataaaagactataaattgggttcagtgtgtactactagggtgatgggtgcacgaaaatctcagaaatcatcactaaagaacttctgcaagtaatcaatcaccatattccccaaaaaccta i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e papAnu2.chr19 47296124 52136 + 51301725 I e macFas5.chr19 55218631 38480 + 59248254 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=153793.000000 s hg38.chr19_GL949753v2_alt 282840 147 + 796479 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgcagtgttggccccaggcaaatctgcttgagactcaatgttc s panTro4.chr19 59237532 147 + 63644993 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgcagtgttggccccaggcaaatctgcttgagactcaatgttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56066565 146 + 60714840 tggaaataagaaaG---------AAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCTGTGTCTTAACTTGttcattccaccagcat---aaatgcagcaacacatgtgtagtgttggccccaggcaaatctgcttgagactcaatgttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102848639 146 - 106955855 tggaaataag-aag---------aAAATAA----AAGAAAAATGATGTTGGTTATAAGTTGTGCAAACCCGTGTCTTAACTTGTTCAttccaccagcat--aaaatgcagcaacacatgtgtagtgttggccccaggcaaatctgcttgagactcaatgttc i nomLeu3.chr10 C 0 I 312 s macFas5.chr19 55257111 162 + 59248254 tgaaaaaAAAAAAAAACTTTACCAAAATAAATTTAAGATCAAGAATGCTAGTCGTAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCATAAaaaatgtagcaacacatgtgaagtgttggttccaggcaaaccggcttaagactcaatgttc i macFas5.chr19 I 38480 C 0 s papAnu2.chr19 47348260 160 + 51301725 tggaaaaaaaaaaaaactttaccaaaataaatttaagatcAAGAATGCTAGTCGTAAACTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCATAAAAAATGTAGCAACAC--GTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTC i papAnu2.chr19 I 52136 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=466464.000000 s hg38.chr19_GL949753v2_alt 282987 467 + 796479 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcgcca----------------------------------------tgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgccgcaggcacacaacctcacgttgtctcttagtaacacaggggacatgctagaa-gcaagttc-----ctagatgccaaccaagaatcaagctcacaaacaagtccttctaaagttagcatcctcatcactgttaggttaacttcttcttgcataTCCTTCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGCACGTGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGCAGATTTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGACTTTCCATGTTGGCGGCCTTTG s panTro4.chr19 59237679 467 + 63644993 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcacca----------------------------------------cgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgctgcaggcacacaacctcacgttgtctcttagtaacacaggggacatgctagaa-gcaagttc-----ctagatgccaaccaagaaccaagctcacaagcaagttcttctaaagttagcatcctcatcaatgttaggttaacttcttcttgcataCCCTTCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGAACGTGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGAAGATGTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGACTTTCCATGTTGGCGGCCTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56066711 465 + 60714840 aagattgttattagatgggg-accacataggcataatgagcagctacagagaaaccagaggaaaccgggtgttcacca----------------------------------------tgaattacactgtttacagaaacagcctagtgaagacgtaacagcagaattcagt---gcaggcacacaacctcacgttgtctcttagtaacacaggggatatgctagaaggcaagttc-----ctagatgccaaccaagaaccaagctcacaagcaagtccttctaaagtgagcatcctcatcgctgttaggttaacttcttcttgcataCACTGCACCTAAAAGAAATAGTAGTCATCTTCAATCCTTCAGCACAGCGTTCACACAGAACATGCCTCCAGCTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCTGATGAAGATTTTTCAAAGTTCTTCAAACTG--AAGAGTAAATCCAAAACCATCTTGACTTGCCATGTTGGCAGCCTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849097 468 - 106955855 aagattgttattaggtgggg-accacataggcataatgagcagctacagagaaaccagaggaaactgggtgttcacca----------------------------------------cgaattacactgtttacagaaacagcctagtgaagacataacagcagaattcagtgctgcaggcacacaacctcacattgtctcttagtaacacagggaacatgctagaaggcaagttc-----ctagatgccaaccaagaaccaagctcacaagcgagtccttctaaagttagcatcctcatcgctgttaggttagcttcttcttgcataCCCTGCACCTAAAAGAAATAGTAGTCACCTTCAGTCCTTCGGCATAGCGTTCACACAGAACGTGCCTCCAGTTCTCCCAGATTCTTCTAGGGCCAGCACAGCTTTTCCGATGCAGATTTTTCAAAGTTCTCCAAACTG--AAGAGTCAATCCAAAATCATCTTGTCTTTCCATGTTGGCAGCCTTTG i nomLeu3.chr10 I 312 C 0 s macFas5.chr19 55257273 508 + 59248254 aaggttgttattaggtgggg-accacataggcataaGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCACCAGCtttttttttttttttttt---AACTAGCTCATCAACAGTGAGCTACACTATTTGCAGAAACAGCCTAGTCAAGAC---ACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagacgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttgcaactgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCTGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47348420 513 + 51301725 AAGGTTGTTATTAGGTGGGGCACCACGTAGGCATAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGtttgccagcttttttttttttttttttttaaactagcttATCAACAGTGAGCTACACTGTTTGCAGAAACAGCCTAGTCAAGAC---ACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGaaaaaaaTAACAGTCGTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGACTCTTCCGGCCctatctcagttttttttttgccGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGTCATCT i papAnu2.chr19 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47018034 40010 + 50890351 I e rheMac3.chr19 3757269 74644 - 64156825 I a score=570263.000000 s hg38.chr19_GL949753v2_alt 283454 268 + 796479 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTAGAGACCGCCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCATTCACTGGGGGC-TAGACAGGCTGCACCCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGAGAAGTCGT---AGTTACTCCTGACTTTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC s panTro4.chr19 59238146 268 + 63644993 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTAGAGACCGCCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCATTCACTGGGGGC-CAGACAGGCTGCACTCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGGGAAGTCGT---AGTTACTCCTGACTTTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067176 271 + 60714840 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATCATCCCCTGGAGACTACCAGGATCAAGCCAGCATGGTGGTTGGAATGAGATTCTCCATTGCATAGTCTGAAGGGGCATGGTCAGTAGACAGAACAGGGCGTTCACGGGGGGC-CAGACAGGCTGCACTCACGTTGGGAG-CCTGGATGGGTGTTTACACCTTGACACTCCTGAAAGGGAAGTCCTGAAAGGGAAGCCTGACTCTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849565 268 - 106955855 GGGGCCTTCTCTGGCTGTGCTGAGCCTGAAAGATTATCCCCTAGAGACCAGCAGGATCAAGCCAGCATGGTCATTGGAATGAGATTCTCCATTGCACAGTCTGGAGGGGCATGGTCGGTAGACAGAACAGGGCTTTCACTGGGGAC-CAGACAGGCTGCACTCACATTGGGAG-CCTGGATGGGTGTTTACACATTCACACTCCTGAAAGGAAAGTCAT---AGTTACTCCTGACTCTGAAACTATACTTGGTGGATGCTGGTTGAGAGGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60158695 270 + 64156825 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCACTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i rheMac3.chr19 I 26022 T 71291 s macFas5.chr19 55257781 270 + 59248254 GGGGCCTTCCCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i macFas5.chr19 C 0 T 53931 s papAnu2.chr19 47348933 270 + 51301725 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCATGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCT---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i papAnu2.chr19 C 0 T 37983 s chlSab2.chr6 47058044 270 + 50890351 GGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATAGAATATTTGCTGAGGACTTAGACAGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTAGAAAGGGGAGTTCC---AGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATC i chlSab2.chr6 I 40010 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I a score=1820.000000 s hg38.chr19_GL949753v2_alt 283722 2 + 796479 AA s panTro4.chr19 59238414 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067447 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849833 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47058314 2 + 50890351 AA i chlSab2.chr6 C 0 T 57092 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e papAnu2.chr19 47349203 37983 + 51301725 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=54415.000000 s hg38.chr19_GL949753v2_alt 283724 103 + 796479 GGACTCCTACGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCCTGTCTTGGCTCCTTCATAACAACTCTCTTCCCTCttttt s panTro4.chr19 59238416 103 + 63644993 GGACTCCTACGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCCTGTCTTGGCTCCTTCATAACAACTCTCTTCCCttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067449 103 + 60714840 GGACTCCTAGGAATAAGAGCATGGAAGGATTAGAGCAGCCGGGGCCATTCTACTCCTGCTCGCATGTCTTGGTTCCTTCATAACAACTCTCTTCCCttctttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849835 103 - 106955855 GGACTCCTAGGAATAAGAGCATGGGAGGATTAGAGCAGCTGGGGCCATTCTACTCCTGCTCCCATGTCTTGGTTCCTTCATAACAACTCTCTTCCCttctttt i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47058316 57092 + 50890351 T e papAnu2.chr19 47349203 37983 + 51301725 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=7414.000000 s hg38.chr19_GL949753v2_alt 283827 17 + 796479 ttttttttt------ttttttga s panTro4.chr19 59238519 23 + 63644993 ttttttttttttttgttttttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067552 14 + 60714840 tttttt---------ttttttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849938 15 - 106955855 ttttttt--------tttttcga i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47311220 17 + 51301725 ttcttcttc------ttttttga i papAnu2.chr19 T 37983 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e chlSab2.chr6 47058316 57092 + 50890351 T e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=86629.000000 s hg38.chr19_GL949753v2_alt 283844 68 + 796479 gatggagtcttgctccattgcccaggctggagtgcagtggtgcaatctcagctcactgcaacatctgc s panTro4.chr19 59238542 68 + 63644993 gatggagtcttgctccattgcccaggctggagtgcagtggtgcaatctaagctcactgcagcatctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067566 68 + 60714840 gatggagtcttgctccattgcccaggctggagtgcagtggcgcaatctcggctcactgcaacttctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102849953 68 - 106955855 gatggagtcttgctccattgcccaggctggagtgcagtggtgccatctcagctcactgcaacctctgc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47311237 68 + 51301725 gatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatcttggctcactgcaacctctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47001224 68 + 50890351 gatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatctcagctcactgcaacctctgc i chlSab2.chr6 T 57092 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e macFas5.chr19 55258051 53931 + 59248254 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=3103858.000000 s hg38.chr19_GL949753v2_alt 283912 1810 + 796479 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccatgcctggctaatttttgtatttttagtagagacagtgtttcaccttgttggtcaagctggtctcgaactcctgacctcagatgatccacctgccttggactcccaaagtgctggggccaccgcgcctggACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTCCCACCTCAGATGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGATACAGGAATA-------------------------------CTTAACTGTGCTCCTTTCTCATCTTCAATTTGTTCCCATATTAGGTAAACCCGTGCTTAACCCCTTAAGGTAAATACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGATTGTACCAGAGTCCAGGGTACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCTAATTATCTCTGTGGTCCAGTGTAGCTTAA---TACTACTACTATTAAAAGTAATAATCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGTCCTGTTTTGCGATGAATGAGAGAATGATTTTAGAATCCAAGCCttttt-----------tttttttttgagacagagttttgctcttgttgtccaggctggagtgcaatggtgcaatctcggctcaccgcaacctctgcctcc--gattcaagcgattctcctccctcagcctcctgagtagctgggattacaggcatgcacaactacacctggctaatactgtatttttagtagagacagtgtttctctatgttggtcaggctggtctcgaactcttgacctcaggtgatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGCATCCAAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAAAAAAATCTCCCATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAGCAAAAAATTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCAGATGGATACATGGACAAAAAAATTAAGCTACCTAGAGATCTCGAATGTGTGTCAACCTAATACAAGGACTATTAGAGAATACAGGTGGGCAAGAATCACTTAACCCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGG-AAAAATGAAAAAATGACAAAGTGGTCATTATATGAAGATCCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTAT----TCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAAGACTTATTTGATTATGAGGAAATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTCACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATCAATCTCAAATCATTGGATGGAGAGAAATATACATATACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctact-aaaaatacaaaattagccggaaatggtgg s panTro4.chr19 59238610 1810 + 63644993 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtagagagagtgtttcaccttgttggtcaagctggtctcgaactcctgacctcagatgatccacctgccttggactcccaaagtgctggggccaccgcgcccggACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTTCCACCTCAGATGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGATCACCACCAACTTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGCAAACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGATACAGGAATA-------------------------------CTTAACTGTGCTCCTTTCTCATCTTCGATTTGTTCCCATATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGATTGTACCAGAGTCCAGGGTACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCTAATTGTCTCTGTGGTCCAGTGTAGCTTAA---TACTACTATTATTAAAAGTAATAATCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGTCCTGTTTTGTGATGAATGAGAGAATGATTTTAGAATCCAAGCC--ttt-----------ttttttttgaagacagagttttgctcttgttgtccaggctggagtgcaacggtacaatctcagctcaccgcaacctctgcctcc--gattcaagcgattctgctccctcagcctcctgagtagctgggattacaggcatgcacaactacacctggctaattttgtatttttagtagagacagtgtttctccatgttggtcaggctggtctcgaactcttgacctcaggtgatccgcccacctcggcctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGCATCCAAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAACAAAATCTCCCATTGTTAATTCAGTGTAGAAACTCATGAGAAAAAAGCAAAAAATTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCATATGGATACGTGGACAAAAAAATTAAACTACCTAGAGATCTCGAATGTGTGTTAACCTAATACAAGGACTATTATAGAATACATGTGGGCAAGAATCACTCAACCCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACAAAAAAATGAGAAAGTGGTCATTATATGAAGATGCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTAT----TCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAACACTTATTTGATTATGAGGACATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTCACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggccaggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggaggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctact-aaaaatacaaaattagccggaaatggtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56067634 1826 + 60714840 ctcccaggttcaagcaattcttctgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtagagacagtgcttcaccttgttggtcaggctggtcttgaactcctgacctcagatgatccacccgccttggactcccaaagtgctgggGCCACCATGCCCAGACCTCTCTTCCCTTCTCATGGGAGAATTGTGTAACCATCCTTGCTAACCTCAACTTCCACCTCAGATGGAGCACTGTATAATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGGTTTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAGAAAAAAAGGAATGCAAAGACACAGGAATG-------------------------------CTTAACTGTGCTCCTTTCTCATCTCAAATTTGTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAACACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCACATGTGGGACTCTAGGTTGTACCAGAGTCCAGGATACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGCTCCAGTGCAGCTTAA---TACTACTGCTAATAAAAGTAATAATCACTGTCTCACTTTTAATGGATGGGCCCACCCATCTGTCCTGTTTCGCGATGAATGAGAGAATGATTATAGCATCCAAGCCTttttgttttgttttgtttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctctgcctcccagattcaagcgattctcctccccgagcatcct--gtagctgggattacaggcatgcacaactacgcctggctaattttgtatttttagtagagacagggtttctccatgtt-gtcaggctggtctcgaactcctgacctcaggtgatctgcccaccttggtctcccaaagtgctaggattacaggtgtgagccaccatgccgggccGTATCCAAGCCTCTTTTCCAGGAACAAGAAATACTACAGTGAAAAAAATCTCCCATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAGCAAAAATTTTT-AAGGAGATAAATTAG---------AAAACAACATGTGCAGATGGATACATGGA-AAAAAAATTAAGCTACCTAGAGATCTCGAATATGTGTTAACCTAATACAAGGACTATTAGAGAATACAGGTGAGCAAGAATCACTTAACCCACTTTGTCGTGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCAGTATATGAATATCCAGAAAAATAATATTATTCAATATAGGATCAGCTGATTGAAGTATTTTGTCAACAAATATGCAGAAAGTTTCCTAGTGTGGACAACACTTATTTGGTTATGAGGAAATTTAGTAAGTGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAA---TTAAGTAAAAATCAATAAAGACATAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGGGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGTTATGTggccgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaacgctgtatctact-aaaaatacaaaattagctggaaatggtgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102850021 1823 - 106955855 ctcccaggttcaagcaattcttttgtctcagcctccagagtagttgggactacaggggcctgccaccacgcctggctaatttttgtatttttagtaaagacagtggttcaccttgttggtcaggctggtctcgaactcctgacctcagatgatccacccgccttggactcccaaagtgctggggccaccgcgcctggACCTCTCTTCCCTTTTCATGGGAGAATTGTGTAACCGTCCTTGCTAACCTCAACTTCCACCTCAGATAGGGCACTGTATGATTTCCTTCCTCAAATTTGTTCAAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATATTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGAATTCAAAGACACAGGAGTG-------------------------------CTTAAGTGTGCTCCTTTCTCATCTCAGATTTGTTCCCAAATTAGCTAAACCAATGCTTAACCCCTTAAGGTAAACACCTCTAGTAACTCTTCATCTGTCAATACAGAATTCAGAGATGCGTATGTGGGACTCTAGGTTGTACCAGCGTCCAGGATACAACAGAGCTAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTGTCTCTGTGGTCCAGTGCAGCTTAA---TACTACTACTAATAGAAGTAACAAGCACTGCCTCACTTTTAATGATTGGGTCCACTCATCTGCACTGTTTTGTGATGAATGGGAGAATGATTATAGCTTCCAAGACttttt--------tttttcttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccagattcaagtgattctcctccctcagccccctgagtagctgggattacaggcatgcacaactacacctggctaattttgtatttttagtagagacagggtttcttcatgttggtcagtctggtctcgaactcctgacctcaggtgatccgcccacctctgcctcccaaagcactgggattacaggtgtgagccaccatgccgggcTGCATCCTAGCCTCTTTTCCAGGAGCAAGAAATACTACAGTGAACAAAATCTCCTATTGTTAATTCAATGTAGAAACTCATGAGAAAAAAACAAAAATTTTT-AAGGAGCTAAATTAG---------AAAAAAACATGTGCAGATGGATACATGGACAAAAAAATTAAGCTACCTAGAGATCTCGAATGTGTGTTAACCTAATACAAGGACTATTAGATAATGCAGGTGAGCAAGAATCACTTAAACCACTTTGTCATGGAAAATGTCTTTGAGGATGTGACAGGTTTGGTAAGAACAGAACAATGAGAAGGTGGTCATTATATGAAGATCCAGAAAAATAATGTTATTCAATATAGGATCAGCTGATTGGAGTATTTTGTCAACAAACATGCAGAAAGTTTCCTAGTGTGGATAACGCTTATTTGATTATGAGGAAATTTAATAAATGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAGTAAAGACACAAAATGAGAAAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATACACAGAATACTCTCTGAGAATAACTAGAATAAGGAGATATGTggctgggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggtgggtggatcacttgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccatctctact-aaaaatacaaaattagccggaaatgatgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55204120 1820 + 59248254 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactataggcacgtgccaccatgaccgactaatttttgcatttttagtagagacggggcttcaccttgttggtcaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggGCC-CCACACCTGGACCTCTCTTGCCTTCTCATGGAAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTG-------------------------------CTTAACTATGCTCCTTTCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCGTAACTCTTCACCTGTCCATACAGAATTCA------TGTGTGTGTGACTCTAGGTTGTACCAGAGCCCAGCATACAACAGAGCCAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGGTCCAGTGCAGCTTAA---TACTACTACTACTAAAAGTAATAATCACTGACTCACTTTTAATGATTGGGTCCACCCATCTGTCCTGTTCTGCAAT--------GAATGACTATAGCATCCAAACCttttt-tttttttttttttttttttgaggcagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcacggcaacctctgcctcccagattcaaccgattcgcctccctcagtctcctgagtagctgggattacagacatgcgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccatgccaggccGCATCCAAGCCTCTTTTTCAGGAACAAGAAACACTACAGTGAACAAAATCTCCCATTGTTAATTCAATGTATAAACTCATGAGAAAAAAGCAAAAAATTTTTAAGGAGATAAATTAG---AAAAAAAAAAAACCATGTGCAGACGGATACATGGA-CAAAAAATTAAGCTACCTAGAGATCTCAAATATGTGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAATCACTTAACCTACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCACTATATAAAGATCCAGAAAAATAATATTATTCAATATAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTCCTAGTGTGGACAATACTTATTTAATTATGAGCAAATTTAATAAGTGATGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAATGAAGAAATAAAATGAG-AAAAAACCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATACATATGCAGAATACTCTCTGAGAAGAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcacttcatgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctacc-aaaaatacaaaattagccggaaatggtgg i macFas5.chr19 T 53931 C 0 s papAnu2.chr19 47311305 1821 + 51301725 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactacaggcacgtgccaccatgcccggctaatttttgcatttttagtagagac--ggcttcaccttgttggtcaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaagtgctggggcc-gCACACCTGGACCTCTCTTGCCTTCTCATGGGAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCATTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTG-------------------------------CTTAACTATGCTCCTTCCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCGTAACTCTTCACCTGTCCATACAGAATTCA------TGTGTGTGTGACTCTAGGTTGTACCAGAGCCCAGCATACAACAGAGCCAAAGGCTGTCACTGCCTTTTCTATTGTTCTGCCTCATCCAATTATCTCTGTGGTCCA-TGCAGcttaa---tactactactactaaaagTAATAATCACTGACTCATTTTTAATGATTGGGTCCACCCATCTGTCCTGTTTTGCAAT--------GAATGACTATAGcatccaaatcttttt-tttttttttttttttttttgaggcagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcaccgcaacctctgcctcccagattcaagcgattctcctccctcagtctcctgagtagctgggattacagacatgtgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgtccaccttggcctcccaaagtactgggattacaggtgtgagccaccatgccaggccgcATCCAAGCCTCTTTTTCAGGAGGAAGAAATACTACAGTGAACAAAATCTCCCGTTGTTAATTCAATGTATAAACTcatgagaaaaaagcaaaaatttttaaaggagataaattagaaaaaaaaaaaaaaaacatgtgcaGACGGCTACATGGA-CAAAAAAGTAAGCTACCTAGAGATCTCAAATGTGTGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAACCACTTAACCCACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTCGGTAAGAACCAAACATTGAGAAGGTGGTCATTATATGAAGAtccagaaaaatattattattcaataTAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTTCTAGTGTGGATAACAGTTATTTAATTATGAGGAAATTTAATAAGTGCTGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAaaagtcaataaagaaacaaaatgag-aaaaaacctATCTACAATAAAACCATGAATCTCAAGTCATTGGATGGAGAGAAATATACATACGCAGAATTCTCTCTGAGAAGAACTAGAATAAGGAGATacgtggccgggcgcagtggctcacacctgtaatcccagcacttcctgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaatacaaaattagccagaaatggtGG i papAnu2.chr19 C 0 I 40238 s chlSab2.chr6 47001292 1836 + 50890351 ctcccaggttcaagcaattctcctgtctcagcctccagagtagctgggactataggcacgtgccaccatgaccaactaatttttgcatttttagtagagatggggcttcaccatgttggtcaggctggtcttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctgggGCC-CCACACCTGGACCTCTCTTGCCTTCTCATGGGAGAATTGTGTAACAGTCCTTGCTAACCTCAACTTCCACCTCAGACGGAGCACTGTATGATTTCCTTCCTCAAATTTGTTCCAGTTCTTGGGCCTCGTTGAGGTCACCACCAACCTCTCGG-TTTGGGGGATAGTAAGAGTTTAGTTTTGC-AACCACAACTCAGTGACAG-AAAAAAGGATTTCAAAGACACAGCAGTGCTTAATTATGCTCCTTTCTCATCTCAAATTTCTTAACTATGCTCCTTTCTCATCTCAAATTTCTTCCCAAATTAGCTAAACCCATGCTTAACCCCTTAAGGTAAATACCTCTCATAACTCTTCACCTGTCCATACAGAATTCAGAGATGGGTATGTGGGACTCTAGCTTGTAC-----------------CAGAGCTAAAGGCTGTCACTGCCTTTTCTACTGTTCTGCCTCATCCAATTATCTCTGTGGTCCAGTGCAGCTtaatactactactactactaAAAGTAATAATCACTGACTCACTTTTAATGATTGGGTCCACCCATCTGTCCTGTTCTGCAAT--------GAATGACTATAGCATCCAAACC-----------ttttttttttttttgaaacagagttttgctcttgttgcccaggctggagtgcaatggtgagatcttggctcactgcaacctctgcctcccagattcaagcgattctcctccctcagtctcctgagtagctgggattacagccatgcgcaactatgcctgtctaattttgtatttttaatagagacagggtttctccatgttggtcaggctggtcccgaactcctgacctcagatgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccatgccaggccGCATCCAAGCCTCTTTTTCAGGAGGAAGAACTACTACAGTAAACAAAATCTCCCATTGTTAATTCAATGTATAAACTCATGAGAAAAGAGCAACAATTTTTTAAGGAGATAAATTAGAAAAAAAAAAAAAAAACATGTGCAGACGGATACATGGA-CAAAAAATTAAGCTACCTAGAGATCTCAAATGTATGTTAACCTAATACAAGGACTATTAGAGAATATAGGTGAGCAAGAATCACTTAACCTACTTTGTCATGGAAAATGTCTTTGCGGATGTGACAGGTTTGGTAAGAACCAAACAATGAGAAGGTGGTCACTATATAAAGATCCAGAAAAATAATATTATTCAATATAAGATCAGCTGATTGAAGTATTTTGTGAACCAATATGCAGAAAGTTTCCTAGTGTGGACAATAATTATTTAATTATGAGGAAATTTAATAAGTGATGTGAAGTAACATAGATCTGTATTTACAGATGTGCAATAAATTGTTAAGTAAAAATCAATAAAGAAATAAAATGAG-AAAAAATCTATCTACAATAAAACCATGAATCTCAAATCATTGGATGGAGAGAAATATATATATGCAGAATACTCTCTGAGAAGAACTAGAATAAGGAGATATGTggccgggtgcagtggctcacacctgtaatcccagcacttcatgaggtcgaggtgggtggatcacttgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctact-aaaaatacaaaattagccggaaatggtgg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=114222.000000 s hg38.chr19_GL949753v2_alt 285722 95 + 796479 tgcatgcctgt-aatcccagctactcaagaggctgaggcaggagaatcgcttgagcctgggaggcggaggttgcagtgagcagagatcacgccact s panTro4.chr19 59240420 96 + 63644993 tgcatgcctgtaaatcccagctactcaagaggctgaggcaggagaatcacttgagcctgggaggcagaggttgcagtgagcagagatcacgccact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069460 96 + 60714840 tgcatgcctgtaaatcccagctactcaagaggctgaggcaggagaatcgcttgagcctgggaggcagaggttacagtgagcagagatcacgccact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851844 95 - 106955855 tgcatgcctgt-aatcccagatactcaagaggctgaggcaggagaatcgcttgagcccggaaggtggaggttgcagtgagcagagatcacgccact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55205940 95 + 59248254 tgcacgtctgt-agtcccagctgctcgagaggcttaggcaggagaatcacttgagcccagaaggtagaggttgcagtgagccaagatcgtgccatt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003128 95 + 50890351 tgcacacctgt-agtcccagctactcgagaggcttaggcaggagaatcgcttgagcccggaaggtagaggttgcagtgagccgagatcgcgccatt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e calJac3.chr22 45551422 16310 + 49145316 I e papAnu2.chr19 47313126 40238 + 51301725 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=3279.000000 s hg38.chr19_GL949753v2_alt 285817 2 + 796479 gt s panTro4.chr19 59240516 2 + 63644993 gt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069556 2 + 60714840 gt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851939 2 - 106955855 gt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206035 2 + 59248254 gt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003223 2 + 50890351 gt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567732 2 + 49145316 GC i calJac3.chr22 I 16310 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e papAnu2.chr19 47313126 40238 + 51301725 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=280393.000000 s hg38.chr19_GL949753v2_alt 285819 154 + 796479 acAGGAAGTTTCAAACCCAGGAGAGGTTATCTTTCAAGTACTCAGTGTTGTGGTTTCTCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGTTAATGG s panTro4.chr19 59240518 154 + 63644993 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTACTCAGTGTTGTGGTTTCTCCTGCCAGGGTGACAGCCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGTTTTTATTCCTATCTCCACAGGATGAAAACAGTTAATGG i panTro4.chr19 C 0 I 1627 s ponAbe2.chr19 56069558 154 + 60714840 acAGGAAGTTTCAAACGCAGGAGAGATTATCTTTCAAGTCCTCGGTGTTGTGGTTTCCTCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGTTAATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102851941 154 - 106955855 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTTCTCAGTGTTGTGGTTTCCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTATTCCTACCTCCACAGGATGAAAACAGCTAATGG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206037 154 + 59248254 acAGGAAGTTTCAAACCCAGGAGAGATTATCTTTCAAGTACTCAGTGTTGTGGTTTCCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTGTTCCTGCCTCCACACGATGAAAACAGTTACTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353364 142 + 51301725 ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCC-------TGCAGTTGCCCCTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAA----TCTCTTGCTTTTGTTCCTTCCTCAACACAATGGCCACGGTTACCGG i papAnu2.chr19 I 40238 C 0 s chlSab2.chr6 47003225 154 + 50890351 acAGGAAGTTTCAAACCCAGGAAAGATTATCTTTCAAGCACTCAGTGTTGTGGTTTTCCCTGCCAGGGTGACAACCTGATGATTATGGAAATCTAATCAGAAAACTGCTATCTTGCTTTTGTTCCTACCTCCACACAATGAAAACAGTTACTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567734 139 + 49145316 ACAGTGGGTGTCATATGCAGGGGAGAGTCACTTTCAAGTCC-------TGTGGTTGC--------AGGTGACAGCCTGGTGCTCATAGGAATCTGCTCAGAAAATCTCTATCTTGTTTCTGTTCCTTCCTCAACACAATGGCCATGGTTACCGG i calJac3.chr22 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=28119.000000 s hg38.chr19_GL949753v2_alt 285973 11 + 796479 TAGAGACAAAA s panTro4.chr19 59242299 11 + 63644993 TGGAGACAAAA i panTro4.chr19 I 1627 C 0 s ponAbe2.chr19 56069712 11 + 60714840 TGGAGACAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852095 11 - 106955855 TGGAGACAAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206191 11 + 59248254 TGGAGACAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353506 11 + 51301725 TGGAGACAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47003379 11 + 50890351 TGGAGACAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567873 11 + 49145316 TGGAGACAAAA i calJac3.chr22 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19747319 28289 - 122678785 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=232408.000000 s hg38.chr19_GL949753v2_alt 285984 110 + 796479 TATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAA---TTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT s panTro4.chr19 59242310 110 + 63644993 TATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAA---TTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069723 110 + 60714840 TATGTCCAGAGTAGACAGGAGTCACAGAAAAAGTGAA---TTCTGATGCATTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852106 110 - 106955855 TATGCCCAGAGTAGACAGGAGTCACAGAAAAAGTGAA---TTCTGATACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGATACCTTTTGGAAACAAGGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206202 110 + 59248254 TATGTCCAGAGTAGACAGAGGTCACAGAAAAAGTGAA---TTCTGACACGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAGCTGAGAGACCTTTTGGAAATAAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353517 110 + 51301725 TATGTCCGGAGTGGACTAGAGTCCaaaaaaaaGGTAC---ATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47003390 110 + 50890351 TATGTCCAGAGTAGACAGAGGTCACAGAAAAAGTGAA---TTCTGACATGTTCTTTCCCAGGAAGTTACTGGTACAGAAGTTTAGAACTGAGAGACCTTTTGGAAATAAGGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45567884 109 + 49145316 TACGTCCAGAGTGGACTGGAGTCCAAGAAAAGATGTA----TCTGGCATCGCCTTTCCTAGAAAGTCACTGGGACAGAAGTTCAGAAATGAATGAGCTTTTGAAAACAAGAAT i calJac3.chr22 C 0 I 320 s canFam3.chr1 19719030 111 - 122678785 TACATTCAGACGAGGTAAAAGGTACCAAGAGAGAGGAATTTCCTGAAAC--TTCTTCCAGAGAAGTCAGGGACATCAAATTTCAGGTCTGAATTAGTCTTTTAACTCCGGGAT i canFam3.chr1 T 28289 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=5112.000000 s hg38.chr19_GL949753v2_alt 286094 2 + 796479 GG s panTro4.chr19 59242420 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069833 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852216 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206312 2 + 59248254 GG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353627 2 + 51301725 GG i papAnu2.chr19 C 0 T 40453 s chlSab2.chr6 47003500 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45568313 2 + 49145316 GG i calJac3.chr22 I 320 C 0 s canFam3.chr1 19719141 1 - 122678785 -A i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=187531.000000 s hg38.chr19_GL949753v2_alt 286096 142 + 796479 CATTCTGCCTTTGATGGATGGAAGAGTACTATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA s panTro4.chr19 59242422 142 + 63644993 CATTCTGCCTTTGATGGATGGAAGAGTACTATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTGTCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069835 115 + 60714840 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCCAGATTTAGATAGAGTTTGCTAAAGGCGTCTATCTT-AGAGTGGCTGAGCCTTCTCCACTTCAAGCTATGACTTTCTGTGAA--------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852218 136 - 106955855 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCC------AGATAGAGTTTGCTAAAGGTGTCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATGACTTTCTGTGAATTACCCACCCACTTGTCCTTCACAATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206314 118 + 59248254 CATTCTGCCTTTGATGGATGGAAGAGTACCATCCCAGATTTAGATAGAGTTTGCTAAAGGCATCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATCACTCTCTGTGAATTA------------------------ i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47003502 142 + 50890351 CATTCTGCCTTTGATGTATGGAAGAGTACCATCCCCGATTTAGATAGAGTTTGCTAAAGGCATCTATCTT-AGAGTGGCTGAGCCATCTCCACTTCAAGCTATCACTCTCTGTGAATTACCCACCCACTTGCCCTTCAGAATA i chlSab2.chr6 C 0 I 32 s calJac3.chr22 45568315 128 + 49145316 CATTCTGCCTTTCATAAATGGGAGAATAACATCCCAGATTTATTTAGAGTTTAATAAAGGTGTTCATCTTCAGAGCAGCTGAGCAAACTCAACCTTGAACTTCCACTCTCCATGAGTTCCCTGACCAC--------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19719142 102 - 122678785 -ATTCAGAATTTAACG---GGGAGAACAAAGTCTCAGATCTGAAGAGAATTTTTTCAATGTCTTAATCA--AGAATGGATGA-TCAACTTAGCTGCAGG-TATGACTTAC--------------------------------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e papAnu2.chr19 47353629 40453 + 51301725 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=372621.000000 s hg38.chr19_GL949753v2_alt 286238 174 + 796479 AGAGCTTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCT-GCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTCTCTCCACTTCAGCTGGACCTCT s panTro4.chr19 59242564 174 + 63644993 AGAGCTTACCCACCCACTTGTCCTGCAGAATAAGAGGGACCTTTTAGTCT-GCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCACCTTTGCAATCCC------------TAGGAGTCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTCTCTCCACTTCAGCTGGACCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56069950 169 + 60714840 -----TTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCT-GCTCTTCTGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGACAGGGGCAAGGAATAGGGTCCACTCCTTTCTTCACTTCAGCTGGACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852354 174 - 106955855 AGAGCTTACCCACCCACTTGTCCTACAGAATAAGAGGGACCTTTTAGTCT-GCTCTTCTGATTGCAGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCAATCCC------------TAGGAATCAGCACCATGGATAGGAGTAAGGAATAGGGTCCACTCCTTTCTCTACTTCAGCTGGACCTCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206432 166 + 59248254 --------CCCACCCACTTGTCCTACAGAATATGAGGGACCTTTTAGTCT-GCTCTTCCGGTTGCAGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTCGTGTCCACTCCTCTCTCCACTTCAGCTGGACCTCt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313176 174 + 51301725 aGAGCTTACCCACCCACTTGCCCTTCAGAATAAGAAGGACCTTTTAGTCT-GCTCTTCCGATTACGGACCTGATTCCACAGGTGCCTGGGACATCGTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTAGGGtccactcccctctccacttcagctggacctct i papAnu2.chr19 T 40453 C 0 s chlSab2.chr6 47003676 174 + 50890351 ATAGCTTACCCACCCAGTTGCCCTTCAGAATAAGAGGGACCTTTTAGTCT-GCTCTTCCGATTGCGGACCTGATTCCACAGGTGCCTGGGGCATCTTTGCCATCCC------------TAGGAATCAGCACCATGGACAGGGACAAGGACTAGGGTCCACTCCTCTCTCCACTTCAGCTGGAcctct i chlSab2.chr6 I 32 I 33663 s calJac3.chr22 45568443 166 + 49145316 ----------------CCTGTCCCTTAGAATAGAAGACTCCTTTAATTCT-GGTCTTCAAATTG-GGGCCTGATTCCACTGGT--TTTGGAGATGTCTGTAATCCCAAAAAAGCAAAAAAAAAATCAGCACTGTGGACAAGAGCAAGGGATGCGGTCTG-TTCTCTTCCCACTTCAGGTGGGCCTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19719244 164 - 122678785 AGAGATTCTCCAGCCTCCTGACCTGGA-AATGGGAGGCACCCTTTCCTCTGGCTCTACATATCCAGGTCCTATTTCCACAGGTGCCATTGTAGTCTTC---CTTTC------------TAGATATCAGCACCAAGGACAGAGACAGAGG-------CCACACCTCTGTGCACCTTGATTTGGCTCCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=1093.000000 s hg38.chr19_GL949753v2_alt 286412 1 + 796479 T s panTro4.chr19 59242738 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070119 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852528 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206598 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47313350 1 + 51301725 c i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45568609 1 + 49145316 T i calJac3.chr22 C 0 I 3 s canFam3.chr1 19719408 1 - 122678785 T i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=3176.000000 s hg38.chr19_GL949753v2_alt 286413 5 + 796479 GTTCG s panTro4.chr19 59242739 5 + 63644993 Gttcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070120 5 + 60714840 GTTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852529 5 - 106955855 Gttct i nomLeu3.chr10 C 0 I 317 s macFas5.chr19 55206599 5 + 59248254 cttcc i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47313351 5 + 51301725 cttcc i papAnu2.chr19 C 0 I 2 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19719409 0 - 122678785 C e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=12816.000000 s hg38.chr19_GL949753v2_alt 286418 42 + 796479 Tttt------------------------------------------------------ctttctttctttctttcttt---------ctttct--------------------------------------ttctttctttct-- s panTro4.chr19 59242744 134 + 63644993 ttttttctttttctttcttttcttttctttctttctttctttctttctttctttctttctttctttctttctttcttt---------ctttctctctttctttttctttctttcttttctctctctcccctttctttctttct-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070125 42 + 60714840 cttt------------------------------------------------------ctttctttctttctttcttt---------ctttct--------------------------------------ttctttctttct-- i ponAbe2.chr19 C 0 I 200 s nomLeu3.chr10 102852851 42 - 106955855 tttc------------------------------------------------------ctttctttctttctttcttt---------ctttct--------------------------------------ttctttcttttt-- i nomLeu3.chr10 I 317 I 1 s macFas5.chr19 55206606 41 + 59248254 cctt------------------------------------------------------ccttccttccttccttcctt---------ccttcc--------------------------------------ttccttccttc--- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47313358 41 + 51301725 cctc------------------------------------------------------cctccctccctccctccctc---------ctttcc--------------------------------------ttccttccttc--- i papAnu2.chr19 I 2 C 0 s canFam3.chr1 19719409 45 - 122678785 --------------------------------------------------------------CATGCTTTTTCTTTTTATAAAAAAACTCATT--------------------------------------TTAttttatttaag i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=11281.000000 s hg38.chr19_GL949753v2_alt 286460 10 + 796479 -Cttccttcct s panTro4.chr19 59242878 10 + 63644993 -Cttccttcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070367 10 + 60714840 -Cttccttcct i ponAbe2.chr19 I 200 C 0 s nomLeu3.chr10 102852894 10 - 106955855 -cttccttcct i nomLeu3.chr10 I 1 C 0 s macFas5.chr19 55206647 10 + 59248254 -cttccttcct i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47313399 10 + 51301725 -cttctttctt i papAnu2.chr19 C 0 T 52319 s canFam3.chr1 19719454 10 - 122678785 attttattca- i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=3156.000000 s hg38.chr19_GL949753v2_alt 286470 15 + 796479 tccaacttttatttc----- s panTro4.chr19 59242888 15 + 63644993 tccaacttttatttc----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070377 15 + 60714840 tccaacttttatttc----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852904 10 - 106955855 tcc-----ttccttc----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55206661 15 + 59248254 tccttctttccttcc----- i macFas5.chr19 I 4 I 4806 s canFam3.chr1 19719464 12 - 122678785 --------tccattcatgag i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e papAnu2.chr19 47313409 52319 + 51301725 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=5845.000000 s hg38.chr19_GL949753v2_alt 286485 7 + 796479 agacaca s panTro4.chr19 59242903 7 + 63644993 agataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070392 7 + 60714840 agataca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852914 7 - 106955855 agacaca i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19719476 7 - 122678785 agacaca i canFam3.chr1 C 0 I 131 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=88880.000000 s hg38.chr19_GL949753v2_alt 286492 172 + 796479 gggagtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcccccaactagtgagcataatacccaataagtag-tttttaaccctcttccaccctctagtaatccacagtgtctatttttcctatccttatgctcatCTTTTT s panTro4.chr19 59242910 172 + 63644993 ggaagtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcccccaactagtgagcataatacccaataagtag-tttttaaccctcttccaccctctagtaatccacagtgtcttttgttcctatccttatgctcatCTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070399 171 + 60714840 gggagtacaagtacaaatttcttacatgggaatactgcttgatgctgaggtttggagtatggatcacatcccccaactagtgagcataatacccaataattag--ttttaaccctcctccaccctctagtaatccacagtgtctattgttcctatccttctgctcatCTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102852921 173 - 106955855 gggggtacaagtacaaatttcttacatgggaatattgcttgatgctgaggtttggagtacggatcacatcacccaactagtgaacataatacccaataagtagttttctaaccctcctccaccctctagtaatccacagtgtctattgttcctatccttatgctcatCCTTTT i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 19719483 131 - 122678785 I e calJac3.chr22 45568610 3 + 49145316 I e chlSab2.chr6 47003850 33663 + 50890351 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=72285.000000 s hg38.chr19_GL949753v2_alt 286664 96 + 796479 CTTTACACATTTCACCTCATACTGACCACCCAGCAGGAACAAAATACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTTC s panTro4.chr19 59243082 96 + 63644993 CTTTACACATTTCACCTCATACTGACCACCCAGCAGGAACAAAAGACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070570 96 + 60714840 CTTTACACATTTCACCTCATACTGACCACCCAGCAAGAACAAAAGACCTCAATGCTGCTTGGAAAATAAGGCTCCCTCCCTTCATCTCTACCTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853094 96 - 106955855 CTTTACACATTTCGCCTCATACTGACCACCCAGCGGGAACCAAAGACCTCAATGCTGTTTGGAAAACAAGGctcccttccttcatctctaccttcc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45568613 95 + 49145316 CTTCACGTGTTTCCTTCCACAATGACCACCCAAGAGCTACCAACGACCCCAGCACTGCTGGAAAAATAAAGCCTTCTCTTTTCATCTCTGCTTTT- i calJac3.chr22 I 3 C 0 s canFam3.chr1 19719614 94 - 122678785 CTTCGTGCTTTTCCTCTCCCACTGACTACCAGTGGATCCCCCATGAGCTCAGTGCTGCTGCAGATGTGATGCCCCACCCTTCAAGCGCCCTCTC-- i canFam3.chr1 I 131 C 0 e mm10.chr7 3800171 16630 + 145441459 I e chlSab2.chr6 47003850 33663 + 50890351 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=471254.000000 s hg38.chr19_GL949753v2_alt 286760 416 + 796479 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCCGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACAGACTGTTTGGGGCAGGGACAGAAGGAGTAGGTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTTGGCCCCCTACCTTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAG----AGTGAGAATGACCCCCACTTTCATGAATTTCTTCATCCCTTTCTGAGATGGGATTGCCCTATGACTGGTCCCTGCTGT s panTro4.chr19 59243178 420 + 63644993 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACAGACTGTTTGGGGCAGGGACAGAAGGAGTAGGTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTTGGCCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCTGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCACCCCCACTTTCATGACTTTCTTCATCCCTTTCTGAGATGGGATTGCTCTATGACTGGTCCCTGCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56070666 420 + 60714840 ---TTCCCAGGCTCTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTGAGGAGCTGCAGATCCCACTGACTGTTTGGGGCAGGGACAGAAGGAGTAGATGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGCCAACCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCATCCCCACTTTCTTGACATTTTTCATCCCTATCTGAGATGGGATTGCTCTATGACTGGTCCCTGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102853190 420 - 106955855 ---ttccCAGGCTTTCTGGAAACAACCTCTTCTGTAAAGACTTCAAGGGCAGAAGACTAAGCTGAGAAACTCAGCCCAGAGCTGCAGGAGACTGTGACTCCTGTAGTCTGTGGGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGAGGGTAAGGAGTTGCAGATGCCACGGACTGTTTGGGGCAGGGACAGAAGGAGTAGCTGGGGTTGTGGTGCCTCTTGCTCTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGCCAACCCCCTACATTTTCAAATCTTCTCATTCCACTTACCCAGCACCTTCTGTGACCCCCGAGTA-GGGTAAGGCATGGAGTGAGAGTGAGAATCACCCCCACTTTCATGACTTTTTTCATCCCTTTCTGAGATGGGATTGCTCTTTGACTGGTCCCTGCTGT i nomLeu3.chr10 C 0 I 1294 s chlSab2.chr6 47037513 419 + 50890351 ---TTCCCAGCCCCTCTGGAAACAACTTCTTCTGTAAAGACTTCAAGGGCAGAAGAATAAGATGAGAAACTCAGCCCAGGGCTGCCGGGGACTGTGACTCCTGTAGTCTGTGAGGACCTTGTTGCTCAGCCAACATGAAGTGAGTCCATGTGGGTGAGGAGCTGCAGACCCCACTGTCTGTTTGGGGCAGAGACAGCAGGAGTAGGTGGGGCTGTGGTGCCTCTTGCTGTGTTCCTCAGCTTCATCTCTTTTGCTCAAAGGTCAACCCCCTACATTTTCAAATCTTCTCATTCCACTCACCCAGCACCTTCTGTGACCTCCAAGTA-GGGTAAGGCATGGAGTTACAGTGAGAATCACCCCCACTTTCATTACTTT-TTCATCCCTTTCTGAGATGGGTTTGCCCTATGACTGGTCCCTGCTGT i chlSab2.chr6 I 33663 C 0 s calJac3.chr22 45568708 368 + 49145316 ---TCCCTACCCCTTCTGGAAGCAACCTCTTCTGTAAAGGTTTCATGTGCAGGA---TACACTGAGAAACTCAGCTCAGGACTTGGAGAGATTGTGACTCCTCTA--------GGACCCTCTTACTCAGCAGATGGGAAGTGCATTCATGAGAGTGAAGGGCTGCGGAACCCACATGCTGCTCGGGACAT-GACAGGAGGAACATGTAAGGCTCTGGT-------------TCCCTCACCTCCATCTCCTTTTCTAAAAGGTAAACCTCCAACATTGTTAA----TCTTCCTTCACTCA----------TCTGTGACCCCCAAGTG-AGGTAAGGCATGGGGTGAGAGTGAGAATAACTGTCTCTTTTA-------------CCCTCTCTGGGCTGGGACTGCCCTGTGTCTAACCCTCTCTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19719708 381 - 122678785 CTGGCCCCAGGTCCTGTGGAACCA--CTGCACTGTAAACATTTAAAGTGCAGAG----AATCAGCAAAGTTCAGCCTAGGCCTG-GGAAGGCTGTGTTTCCTGCAGGCTAAGAAGACTCTAAT--CCAGCAGACATGAAGCTTGTCCATG-GGGTGAGGGCCTGCAGTCTCCAAATGCTGCTTAGAACA-----AGAAGCAGGCTGTGGGGCTGTGGTGGCTCCCTCTGTTCTCCTCA-CCCCACCGTACCTCCTCACAGTT----CCTTTATAGTCTTCAGTCTCCTC--CCCACTCGCCTGGCTCTGCCTCTTTTCCTCTGGTGTAGGTAAGACATGAACATGGCATGG-----------ACTCT----GTTTTTTTTATTCCTG-ATAAGA-GGGATCATCCAATGGTTGGGCTCCT---- i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=66430.000000 s hg38.chr19_GL949753v2_alt 287176 98 + 796479 TTTTCCTTCC--TTCTATCCCAGGCCGGGGCTCTCCTAGCACAGGGATGCATGCTAAGG-TTTAGAATCTTAACGGATGTGGTGCTTGGAGCTCCTGTACT s panTro4.chr19 59243598 99 + 63644993 TTTTCCTTCC--TTCTAACCCAGGCCAGGGCTCTCCTAGCACAGGGATGCATGCTAAGGGTTTAGAATCTTAACGGATGTGGTGCTTGGAGCTCCTATACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071086 100 + 60714840 TTTTCCTTCC-TTTCTATCCCAGGCCAGGGCTCTCCTAGCACAGGGATGCATGCTGAGGGTTTAGAATCTTAATGGATGTGGTGCTTGGAGCTCCTATACT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47037932 101 + 50890351 TTTTTCTTCCTTTTCTATACCAGGCCAGGGCTCTCCTAGCACAGGGATGCATGCTGAGGGTTTAGAATCTTAATGGATGTGGTGCTTGGAGCTCCTATACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45569076 89 + 49145316 TACTCCTTCC-TTCCCAGCCCAGCCCAGGGCTCTCC-----------TGCATGCTGAGGGTCTAGAATTTCCATGCGCATGGGTCATGGAGCTCCTATCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19720089 97 - 122678785 TAATTCCCTC--TTCCATTCCAGCCCAGATCTCTGCAAGGACAGGCCAATGACCCGAGCATCTTGGCCATCAAAGGACA-AATGAGTGGACCTCTCACCT- i canFam3.chr1 C 0 I 6556 e mm10.chr7 3800171 16630 + 145441459 I e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=29175.000000 s hg38.chr19_GL949753v2_alt 287274 47 + 796479 GAGACCAAAATCTTTA-GGGGTCACTGGGGTGTGACAATAGGGGTAAG s panTro4.chr19 59243697 47 + 63644993 GAGACCAAAATCTTTA-GGGGTCACTGGGGTGTGACAACAGGTGTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071186 47 + 60714840 GAGACCAAAATCTTTA-GGGGTCACTGCGGTGTGACAACAGGTGTAAG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47038033 35 + 50890351 GAGACCAAAATCTTTAGGGGGTCACTG-------------GGCATAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45569165 45 + 49145316 GAGAACACAAACACT--GAGGTCATGGGGGTGTG-CAACAGGAGGAAG i calJac3.chr22 C 0 T 25911 s canFam3.chr1 102761694 48 + 122678785 GGGACCAGGAACTTCACAGGGACACTGGGCTATGACAACAGGTACAGG i canFam3.chr1 T 14622 C 0 e mm10.chr7 3800171 16630 + 145441459 I e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=2255.000000 s hg38.chr19_GL949753v2_alt 287321 2 + 796479 GA s panTro4.chr19 59243744 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071233 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47038068 2 + 50890351 GA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543299 2 + 49145316 GG i calJac3.chr22 T 25911 I 2 s canFam3.chr1 102761742 2 + 122678785 GA i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47313409 52319 + 51301725 T e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=95560.000000 s hg38.chr19_GL949753v2_alt 287323 76 + 796479 GGAACTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAGAGGGCTTGGAGTAAACTTGGCCTGA s panTro4.chr19 59243746 76 + 63644993 GGAACTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAAAGGGCTTGGTGTAAACTTGGCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071235 76 + 60714840 GGAGCTATGTGGACCACAGCACTAGTAGGTCCCCCTGTGGGCTGAAGTCAAAGGACTTAGTGTAAACTTGGCCTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47261090 76 + 51301725 GGAGCTGAATGAGGCGTAGCACCTGTAGGTCCCCGCgtgagctgaggtcacaggaCTCATGGGGAATTCAGCCTGG i papAnu2.chr19 T 52319 C 0 s chlSab2.chr6 47038070 76 + 50890351 GGAGCTATGTGGACCACAGCATTAGTAGGTCCCCCTGTGGGCTAAAGTCAAAGGACTTAGTGTAAACTTGGCCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543303 76 + 49145316 GGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGG i calJac3.chr22 I 2 I 54 s canFam3.chr1 102761744 74 + 122678785 GGTGTTGAGTGAGCCATAGCACCTGTAGGTCCCCCCATGGGATGAGGTCACAGGACTCAAGGAGAATTCAGCCA-- i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e nomLeu3.chr10 102853610 1294 - 106955855 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=26884.000000 s hg38.chr19_GL949753v2_alt 287399 54 + 796479 GAGAGTAAGGCCATGTCTTTCAATCGATGGTTTTGGGGAGGCACAAGTGACCGG- s panTro4.chr19 59243822 54 + 63644993 GAGAGTAAGGCCATGTCTTTCAACCGATGGTTTTGGGGAGGCACAAGTGACCTG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071311 54 + 60714840 GAGAGTAAAGCCATGTCTTTCAATCAATGGTTTTGGGGAGGCACAAGTGACCTG- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47261166 54 + 51301725 TACATGTGGGACTGGTGCTTTGATTTCAGACGCAGGGGGGCATCAGCTGCTCCC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47038146 54 + 50890351 GAGAGTAAGGTCATGTCTTTCAATCGATGGTTTTGGGGAGGCGCAAGTGACCTG- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102761818 55 + 122678785 TACAGCCCAGCTCGGTACTTTGATCTAAGATGCAGAGGGGGATCAGCTGCCCCCC i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45543379 54 + 49145316 I e nomLeu3.chr10 102853610 1294 - 106955855 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=109932.000000 s hg38.chr19_GL949753v2_alt 287453 88 + 796479 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCGAGGACACTAAGGGCCCTGGCT s panTro4.chr19 59243876 88 + 63644993 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCAAGGACACTAAGGGCCCTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071365 88 + 60714840 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAGTTCTCTCCCGAGGACACTAAGGGCCCTGGCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47261220 88 + 51301725 TCCTTGGTCAGAAAGAAAGTGTCCGTCCATCCCTGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCACTGTGGGGCCCGGCT i papAnu2.chr19 C 0 I 57721 s chlSab2.chr6 47038200 88 + 50890351 TCCTTGGACAGACAGAAGGTACCCAACCAGATCTCTGAGTAGCACTGCAAGGTCAAATTCTCTCCCGAGAACACTAAGGGTCCTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543433 88 + 49145316 TCCTTGGTCAGAAGGAAAGTGTCCATCGGACTCTGTGACTGACACAGCAGGGTCACGTCCTCTCCTGAAGCCACCCTGGGGCCTGGCT i calJac3.chr22 I 54 T 20835 s canFam3.chr1 102761873 82 + 122678785 TCCTTGGACAGTAGGAAAGTGTCCACAGAGCTCAGTG------ACAAAAGGGTCACATTCTCTCCTGGGGCCACCATAGGTCCTGGCT i canFam3.chr1 C 0 I 1 e mm10.chr7 3800171 16630 + 145441459 I e nomLeu3.chr10 102853610 1294 - 106955855 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=160634.000000 s hg38.chr19_GL949753v2_alt 287541 303 + 796479 CAGACAAATGGAGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCCTGGACCCCGAACTGAGGGACTGGCCTCCTCTCTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTTTGTAATCTCCAGGCC---TCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGA----CCAC-TGCCTCATCGCATCCTCTACTCTAggaccctctccctggaccct----caac-ccagggatgaccctggtcccaggaccctgAGCATATAATCAAGA----CAGGGGGCTA s panTro4.chr19 59243964 303 + 63644993 CAGACAAATGGGGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCCTGGACCCCGAACTGAGGGACTGGCCTCCTCTCTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTTTATAATCTCCAGGCC---TCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGA----CCAC-TGCCTCATCGTATCCTCTACTCTAGGACCCTCTCCCTGGACCCT----CATC-CCAGGGATGACCCTGGTCCCAGGACCCTGAGCATATAATCAAGA----CAGGGGGCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071453 303 + 60714840 CAGACAAAGGGAGGGTTTCTTGTACATTTCTAGGAAATATGAAGGTTGCAGTGTGTACAAAGCAGCCCCTTCCCACATGTCGTGGACCCTGAACTTAGGGACTGGCCTCCTCTCTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTATATAATCTCCAGGCC---TCTCACTCTCCTTTTCTAAGTTACTCTCCTTGGA----CCAC-TGCCTCATCGCATCCTCTACTCTAGGACCCTCTCCCTGGACCCT----CATCACCAGGGATGACCCTGGTCCCAGGACCCTGAGCATATAATCAAGA----CA-GGGGCTA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47038288 304 + 50890351 CAGACAAAGGGAGGGTTTCTTGAACATTTCTAGGAAATACCAAGGTTGTAGTGTGTACAAAGCAGCCCCTTCCCACAAGTCCTGGACCCTGAACTGGGAGACTGGCCTCCTCTCTCTCAGCTCCTGTTAGACTCTTGGTGTGGGTCTGTATAATCTCCAGGCC---TCTCACTCTCCTTTTCTAAGTTGCTCTCCTTGGA----TCAC-TGCCTCATTTTCTCCTCTACTCTAGGACCCTCTCCCTGGACCCT----CATCACCAGGGATGACCCTGGTCCCAGGGCCCTGAGCATATAATCAAGA----CAGGGGGCTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102761956 260 + 122678785 CACCCAGAGGGAGG--------------------------------------GTGTGTAGGGGAGC-----------TGTCCTAGA----GA---GAGGAAGGGCCCTTGTTCTGATCTGAGTCTGTCTGTGTCC---TCTGAGTCTTTCCCATCCCCATCCCCTGtctctctctctctctctgtctctcCTTCCCTGGGGACCCCACATCCCTGGTTGACACCATCACCTGGGGCTCCCCTGTCAGGGCCCTGTGAAAGT-CTGGGGTCCTGCCTGCACCCGTGACCCTTCGCCTGTGATTAGGATGTCCAAGGGGTTA i canFam3.chr1 I 1 T 522 e mm10.chr7 3800171 16630 + 145441459 I e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47261308 57721 + 51301725 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=18102.000000 s hg38.chr19_GL949753v2_alt 287844 35 + 796479 ggccaggcgcagtggctcacccctgtaatcccagc s panTro4.chr19 59244267 35 + 63644993 ggccaggcgcagtggctcacccctgtaatcccagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56071756 35 + 60714840 ggccaggtgtggtggctcacccctgtaatcccagc i ponAbe2.chr19 C 0 I 22840 s chlSab2.chr6 47038592 35 + 50890351 ggccgggcacagtagctcacccctgtaatcccagc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47261308 57721 + 51301725 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=38194.000000 s hg38.chr19_GL949753v2_alt 287879 73 + 796479 actttgggaggccgaggtgggcagatcacgaggtcaggagatcgagactatcctggccaacatggtgaaaccc s panTro4.chr19 59244302 73 + 63644993 actttgggaggccgaggtgggcagatcacgaggtcaggagatcgagactatcctggccaacatggtgaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094631 73 + 60714840 actttgggaggccaaggtgggcagatcacgaggtcaggagatcgagactatcctggccaacatgatgaaaccc i ponAbe2.chr19 I 22840 C 0 s chlSab2.chr6 47038627 73 + 50890351 actttgggaggccaaggtgggtagatcacaaggtcaggagactgagactatcttgcctaacatggtgaaaccc i chlSab2.chr6 C 0 T 27705 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102853610 1294 - 106955855 I e papAnu2.chr19 47261308 57721 + 51301725 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=2003.000000 s hg38.chr19_GL949753v2_alt 287952 8 + 796479 agtcacta s panTro4.chr19 59244375 8 + 63644993 agtcacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094704 8 + 60714840 aatcacta i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102853610 1294 - 106955855 I e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47261308 57721 + 51301725 I e macFas5.chr19 55206676 4806 + 59248254 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=387.000000 s hg38.chr19_GL949753v2_alt 287960 2 + 796479 cA s panTro4.chr19 59244383 2 + 63644993 cA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094712 2 + 60714840 TA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55211482 2 + 59248254 cG i macFas5.chr19 I 4806 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e nomLeu3.chr10 102853610 1294 - 106955855 I e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47261308 57721 + 51301725 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=8030.000000 s hg38.chr19_GL949753v2_alt 287962 11 + 796479 ggccaggtgcg s panTro4.chr19 59244385 11 + 63644993 ggccgggtgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094714 11 + 60714840 Tgccgggcgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102854904 11 - 106955855 ggccgggcgca i nomLeu3.chr10 I 1294 C 0 s macFas5.chr19 55211484 11 + 59248254 ggccgggcgcg i macFas5.chr19 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e chlSab2.chr6 47038700 27705 + 50890351 T e papAnu2.chr19 47261308 57721 + 51301725 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=472866.000000 s hg38.chr19_GL949753v2_alt 287973 394 + 796479 gtggctcacacctttaatcccagcactttgggaggctgtggcgggcagatcacgaggtcaggagatcgagactatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagcttggcatggtggcatgcgcctgtagtcccagctacttgggaggctgaggaagaagaattgcttgaactcgggaggtggaggttgcagtgagccgacatagtgccactacactccagcctgggtgacaaagcgagactccgtctc------aaaaaaaaaaa----aaGAGCGAATGGGGCTTGAAGGCTACAGACAGGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGCATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG s panTro4.chr19 59244396 392 + 63644993 gtggctcacgcctgtaatcccagcactttgggaggctgtggcaggcagatcacgaggtcaggagatcgagactatcctggccaacgtggtgaaaccctgtcactactaaaaatacaaaaattagcttggcatggtggcgtgcgcctgtagtcccagctacttaggaggctgaggaaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagatagtgccactacactccagcctgggtgacaaagcgagactccgtctc------aaaaaaaaaaa------GAGTGAGTGGGGCTTGAAGGCTACAGACAGGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGGATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56094725 398 + 60714840 gtggctcacgcctgtaatcccagcactttgggaggctgtggcgggcagatcatgaggtcatgagatcgagactatcctggccaacatggtgaaaccctgtcactactaaaaatacaaacattagcttggcatggtggcgtgcacctgtagtcccagctacttgggaggctgaggcaggagagtcacttgaactcgggaggtggaggttgcagtgagccgagatcgtgccactacactccagcctgggtgacaaagcgagactccatctc------aaaaaaaaaaaaaaaaaGAGTGAATGGGGCTTGAAGGCTGCAGACAGGAGGTTAGGATGCCATTTTGGATTTATCTTTTCCTGGAGGGGATGTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102854915 393 - 106955855 gtggctcacacctgtaatcccagcactttgggaggtcgaggtgggcagatcacgaggtcaagagatcgagactatcctggccaatatggtgaaactctgtcactactaaaaatacaaaaattagcttggcatggtggcatgtgcctgtagtcccagctacttgggaggctgaggaaggagaattgcttgaactcgggaggtggaggttgcagtgagccgagatcgtgccactacattccagcctgggtgacaaagtgagactctgtctc------aaaaaaaaaaa-----aGAGTGAATGAGGCTTGAAGGCTACAGACAGGAGGTTAGGACGCCATTTTGGATTTATCTTTTCCTGGAGGGGATCTGATCTTCTCCCATGGATTTAGTTACTGGTTCAGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55211495 396 + 59248254 gtggctcaagcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagccaggcgtggtggcgggggcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagctgaattggcaccacctcactccagcctgggtgacagagcgaggctccgtctc------aaaaaaaaaaa-aaaaaGAGTGAA-GAGGCTTGAAGGCTACAGACAGGAGGTTAGGATGCCCTTCTGGATTTATCTTTTCCTGGTGGGGATCTGACCTTCTCCCATGGATTTAGTTACTGGGTCAGGTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47010995 402 + 50890351 gtggctcatgcctgtaatcccagcactttgggaggccgagaggggcggatcacgaggtcaggagatcgagaccatcctggccaacatggtgaaaccctgtcactactaaaaatacaaaaattagccgggcatggtggcaggcgcctgtagctccagctacccggaaggctaagccaggagaatggcgtgaatccggaaggcagagcttgcagtgagccaaattggtaccacctcactccagcctgggcgacagagcaaggctccatctcaaaaaaaaaaaaaaaaa-aaaaaGAGTGAA-GAGGCTTGAAGGCTACAGACAGGAGGTTAGGATGCCCTTCTGGATTTATCTTTCCCTGGTGGGGATCTGACCTTCTCCCATGGATTTAGTTACTGGGTCAGGTG i chlSab2.chr6 T 27705 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e papAnu2.chr19 47261308 57721 + 51301725 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=382254.000000 s hg38.chr19_GL949753v2_alt 288367 218 + 796479 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGATAATGAGAATTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCATGCAGGTGTGCAGAGATGTGGACCCAACGCTGCCTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG s panTro4.chr19 59244788 218 + 63644993 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACG-GGGAGTGTGATAATGAGAAGTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCACGCAGATGTGCAGAGATGTGGACCCAACGCTGCCTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATTCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095123 218 + 60714840 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGATAATGAGAAGTGAAGTGGACTGTGTGACACGCCAAGGACCAGAGCATGCAGGTGTGCGGAGATGTGGACCCAGTGCTGCCTGCCATGTGGGATGTAGCCTCATGTTTCGGGCTGGGAAGAGAAGGGAACCCAACAAAGGGAAGTCAACATTAATAGAAAGGAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855308 218 - 106955855 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACTCA-GGGAGTGTGATAATGAGAAATGAAGTGGATTGTGTGACACGCCAAGGACCAGAGCACGCAGGTGTGCGGAGACGTGGACCCAGCGCTGCCTGCCATGTGGGATGTAGCCTTTTGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAATATTAATAGAAAGGAAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55211891 214 + 59248254 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGGTAATGAGAAATGAAGAGGACTGGCTGACACGCCATGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAAGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319029 215 + 51301725 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACATTGGAGTGTGGTAATGAGAAATGAAGAGGACTGTCTGACATGCCGTGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGggctgggaagagaagggaatcCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i papAnu2.chr19 I 57721 C 0 s chlSab2.chr6 47011397 214 + 50890351 TGGAACTCTGAACTGAAGAGATGGAGGCTCAGTAAAGCACACA-GGGAGTGTGGTAATGAGAAATGAAGAGGACTGGCTGACATGCCGTGGACCACAGTACACAGGCGTGCGGAGATGTGGACCCAACG----CTGCCATGTGGGATGTAGCCTCATGTCTCGGGCTGGGAAGAGAGGGGAATCCAACCAAGGGAAGTCAACATTAATAGAAAGGAAAG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45543521 20835 + 49145316 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=151500.000000 s hg38.chr19_GL949753v2_alt 288585 75 + 796479 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCTCTGCACTCAAACACCCATTCCTCCCTCT s panTro4.chr19 59245006 75 + 63644993 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCTGCACTCAAACACCCATTCCTCCCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095341 75 + 60714840 GTGTCATATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCCGCACTCAAACACCCATTCCTCCCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855526 75 - 106955855 GTGTCACATTTTAATGGTCCTCCATGGATCACCCCAGACCAGTGTCCCTGCACTCAAACACTCATTCCTCCCTGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212105 75 + 59248254 GTATCATATTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319244 75 + 51301725 GTATCATATTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011611 75 + 50890351 GTATCATACTTTTATGGTCCTCTACAGATCACCCCAGACCAGTGTCCCTGCACTCAAACATCCATTCCTCCCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522686 62 + 49145316 GTGTCACATGTGCATGGTCCTCCATGGATCACCCCAGA-AATGGTCTCTGTACTTG------------TCCCTCT i calJac3.chr22 T 20835 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=228258.000000 s hg38.chr19_GL949753v2_alt 288660 164 + 796479 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcccagattgcgccactgcattccagcctggtgacagagcaagactccatctcaaaaaaaa---aaaaaaaaaaaaaaaagaaagaaaagaaaagaaaga---aaaaa s panTro4.chr19 59245081 149 + 63644993 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacctgagaggcggaggttgcagtgagcccagattgcgccactgcattccagcctggtgacagagcaagactccgtctcgaaaaaaa---aaaaaaaaaa---------------gaaaagaaaga---aAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095416 130 + 60714840 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcactgagcccagattgcgccactgcattccagcctggcgacagagcaagactccgtctcaaaaa-------------------------------------aaaga---aagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855601 143 - 106955855 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcgcagattgcgccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaa---aaaaagaaag---------------------aagga---aaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212180 170 + 59248254 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacacaagaggcggaggttgcagtgagcccagattccaccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaagaaagaaagaaaaaagaaaaacaaacaaacaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319319 148 + 51301725 AGAAAttgccagaggctgaggcaggagaatcacttgaacccgagaggcagaggttgcagtgagcccagattgtaccactgcattccagcctggcaacagagcgagactccgtctcaaaaaaaa---------------------aaaaaagaaaaacaaacaaa-aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011686 163 + 50890351 AGAAATTGCCAgaggctgaggcaggagaatcacttgaacccgagaggcggaggttgcagtgagcccagattgcaccactgtactccagcctggcgacagagcgagactccgtctcaaaaaaaa---aaaaaaaagaaaagaaaagaaaAAGAAAAACAAAC----AAAAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e calJac3.chr22 45522748 0 + 49145316 C e rheMac3.chr19 60158965 71291 + 64156825 T a score=6398.000000 s hg38.chr19_GL949753v2_alt 288824 3 + 796479 aga s panTro4.chr19 59245230 3 + 63644993 AGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095546 3 + 60714840 aga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855744 3 - 106955855 aGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212350 3 + 59248254 aga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319467 3 + 51301725 aga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011849 3 + 50890351 ATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522748 3 + 49145316 AGA i calJac3.chr22 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e canFam3.chr1 102762216 522 + 122678785 T e rheMac3.chr19 60158965 71291 + 64156825 T a score=66861.000000 s hg38.chr19_GL949753v2_alt 288827 28 + 796479 aaTTGCCAGCAGACAGTCCAGATGGCAT s panTro4.chr19 59245233 28 + 63644993 AATTGCCAGCAGACAGTCCAGATGGCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095549 28 + 60714840 aaTTGCCGGCAGACAGTCCAGATGGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855747 28 - 106955855 AATTGCCAGCAGACGGTCCAGATGGCAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212353 28 + 59248254 aaTTGCTAGAAGACAGTCCAGATAGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47319470 28 + 51301725 aattgccagcAGACAGTCCAGATAGCAT i papAnu2.chr19 C 0 I 590 s chlSab2.chr6 47011852 28 + 50890351 AATTGCCAGCAGACAGTCCAGACAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522751 28 + 49145316 AATGATTAACAGACAGTCCAGAAAATGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19726742 28 - 122678785 AATGACCTGCTGACAGTTTACACAGCAC i canFam3.chr1 I 6556 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=62372.000000 s hg38.chr19_GL949753v2_alt 288855 26 + 796479 AGGCCTCAGATGGTCTTCCCGAACCT s panTro4.chr19 59245261 26 + 63644993 AGGCCTCAGATGGTCTTCCCGAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095577 26 + 60714840 AGGCCTCAGATGGTCTTCCCGAACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855775 26 - 106955855 AGGCCTCAGATGGTCTTCCCGAACCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212381 26 + 59248254 AGGCCTCAGATTGTCTTCCAGAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320088 26 + 51301725 AGGCCTCCGATTGTCTTCCAGAACCT i papAnu2.chr19 I 590 C 0 s chlSab2.chr6 47011880 26 + 50890351 AGGCCTCAGATTGTCTTCCAGAACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522779 26 + 49145316 AGCCCCTAAATTGTCTCCCAAAACAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19726770 26 - 122678785 ATGCCCTACATGCTCCTCTAGAACCT i canFam3.chr1 C 0 C 0 e mm10.chr7 3800171 16630 + 145441459 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=1184104.000000 s hg38.chr19_GL949753v2_alt 288881 413 + 796479 CCTAGGACCATCAGATTCGCTTCCAAGGCTCCAG--CATTC--AATGGTGCATTGTTCTCTCTTCTGTTCACCTTCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGCGTAATCCTGAAGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTGGATGTCTCCCCAGGGCACCCATATCATCT-------TGACAGGACCTGACCCTCTGTGCCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAA s panTro4.chr19 59245287 413 + 63644993 CCTAGGACCATCAGATTCACTTCCAAGGCTCCAG--CATTC--AATGGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGTGTAATCCTGAAGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTGGATGTCTCCCCAGGGCACCCACATCATCT-------TGACAGGACCTGACCCTCTGTGCCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56095603 413 + 60714840 CCTAGGACCATCAGATTCACTTCCAAGGCTCCAG--CATTC--AATGGTGCATTGTCCTTTCTTCTGTTCACCTCCCAGCTGCAGCTTGGGGGCTTCTCTGGCTGTACCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCTACTGTGTAATCCCGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCGCAGAGGTCAGGGTGGATCAATATCACCCAGGACCCCTAGATGTCCCCCCAGGGCACCCGCATCATCT-------TGACAGGACCTGACCCTCTGTGCCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGGCTGAGGTTATCAGCTGCTCCTGAAAATCAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102855801 413 - 106955855 CCCAGGACTAGCAGATTCACTTCCAAGGCTCCAG--CATTC--GATGGTGCATTGTCGTCTCTTCTGTTCACCTCCCAGTTGCAGCTTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCATGCCCATGCGGATGAGATTCTCTACTGTGTAATCCTGAAGGTGTGAGGCTGGGGGTGGTGGACAAAGAGGTCACAGAGGTCAGGGCAAATCAGTATCACCCAGGACCCCTAGATGTCCCCCCAGGGCACCCACGTCATCT-------TGACAGGACCTGACCCTCAGTGCCAGCCCCATAACTGAGAGCATCTCCT--CACTCACTGGTCCCAGAGTCAGACTTGTTTTGTGATGGACTGAGGTTATCAGCTGCTCCTGAAAATCGAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212407 412 + 59248254 CCTGGGACTTTCAGATTCTCTTCCAAGGCTCCAG--CACCC--AATGGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGAAAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGAC-CCCCAGGGCACCCACATCATCT-------TAACAGGACCTGACCCTCTGTGCCAGTTCCATAACCGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320114 412 + 51301725 CCTGGAACTTTCAGATTCCCTTCCGAGGCTCCAG--CACCC--AATGGTGCATTGTCCTCTCTTCTGTTCACCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCGAGGACCACCAGGATCAAGCCGGCCACACCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGAC-CCCCAGGGCACCCACATCATCT-------TAACAGGACCTGACCCTCTGTGCCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAgtcagacttgttttgtgacgGACTGAGGTTATCAGCTGCTCCTGAAAATCAAaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47011906 412 + 50890351 CCTGGGACTTTCAGATTCTCTTCCGAGGCTCCAG--CACCC--AATGGTGCATTGTCCTCTCTTCTGTTCATCTCCCAGCTGCATCCTGGGGGCTTCTCTGGCTGTGCCAATCCTGAAATATCAGAATCCCAAGGACCACCAGGATCAAGCCGGCCACGCCCATGCGGATGAGATTCTCCACAGTGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGACGTCACAGAGGTCAGGGCAGATCAGTATCACCCAGGACCCCTAGATGAC-CCCCAGGGCACCCACATCATCT-------TAACAGGACCTGACCCTCTGTGCCAGTTCCATAACTGAGAGCATCTCCT--CACTCACCAGTCCCAGAGTCAGACTTGTTTTGTGACGGACTGAGGTTATCAGCTGCTCCTGAAAATCAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45522805 415 + 49145316 CCTGAGATCATTAGATCTGTTCTCAGGTTTCCAG--CACTCTGAAGGCTGCACTGTCCTCTCTGCTGTTCACCTCCTGGCTGCATCCTGGGGGCTTCTCTGGCTGTGCTGAGCCTCAAAGAGCAGAACGCCGAGGACCACCAGGACCAAGCCGGCCACGCCCATGCGGATGAGATTCCCCACTGTGTAATCCTGGGGCTgtgaggctggggatggtgggcaaagaggtcacagaggtcagggaggatcagcatcacccaggacctCTGGATGTCCACCCAGGGCACCCACCTCCCCT-------TGACAGGACCTGACCCTCTGTGCCAGCCCCATGACCGCGAGCATCTCCT--CACTCACCATCCTGGGAGTGGGACTTGTTTTGTGATGGGCTGAGGGTCTCAGCTGCTCCTGAGAATCAAAA i calJac3.chr22 C 0 I 35756 s mm10.chr7 3816801 407 + 145441459 CTTTGGGTCATCAGATTTATTTCCCAGAGTGTAGAACATTG--AAAGATGCATTCTTTTCTCTTTAGATTAGTTCCCAGCTGCAGGGTGGGTCTGTCTATGGCTTCGCCAAGCCTCAGTGGCTAGAATCGAAAGGACTATGAGGACCACGACTGCCATCCCCATCCTGATCAGATTCTCTGTTGTGTGATCCTGGTTCTCTGTGGCTGTGG-TATTAGATACAGAAGTTACAGAAGTTAGGGATGGTCAAAGTTTCCTAA-----CTAAGCATCCAACAAGGG--CCCTTGTTGTCCCCGGAGATGACAAGGTTCTACTCT---TACCTGTACTATGACATGGAAT-TCTCTT--TATTCGTCTGCCTAGGTTTTGGGCATGTTCTAGCATGAACAGATGTTCTCAGCTGGTCCTGAGAATAG--- i mm10.chr7 I 16630 C 0 s canFam3.chr1 19726796 411 - 122678785 TCTGGGCACAGGAGATGTATTTCCCAGGCTCTGC--GATTTTGATTGTTGCGTTGTTCACTCTTGTGTTTACCTGCTGGCTGCATCTTGGGTTCTTCTCTGACTGTACCAGGACTCAAAGAGGAGAATCCCGAGGACCACCAGCATCACAGTAGCCATGCCCATTCGGATGAGATTCTCCACTGTGTAATCCTTGGGGTCAGAGGCTAAGGATGA-GGACAGAAAGATCACAGAAGTCAGGGCAGACTCAAATCATTTGGGATC-TTGGATGTCCACCCAGGGTACCTGCCTCCCCT-------TGACAGGACTTCACCCTCCACACCAGCCCTAAAACTGAG----TTTTCTGCTAGTTACCACTGCTGGGATCTGACTTCGTTTGTGATGAGTTGATGTTGTCAGATGCTTCTGAGAATCATAA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60158965 71291 + 64156825 T a score=65218.000000 s hg38.chr19_GL949753v2_alt 289294 42 + 796479 C------AGGGGAAGGGGAAGGAGAAGTTCTTGAAGCAATCTGAGCCC s panTro4.chr19 59245700 42 + 63644993 C------AGGGGAAGGGGAAGGAGAAGTTCTTGAAGCAATCTGAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096016 42 + 60714840 C------AGGGGAATGGGAAGGAGAAGTTCTTGAAGAGATCTGGGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856214 42 - 106955855 C------AGGGGAAGGGGAAGGAGAAGTTCTTGAAGAGATCTGGGCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212819 48 + 59248254 CAGGGGAAGGGGAAGGGGAAGGAGAAGTTCTTGAAGAGATCTCAGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320526 42 + 51301725 c------aggggaaggggaagaagaagttCTTGAAGAGATCTCAGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012318 42 + 50890351 C------AGGGGAAGGGGAAGGAGAAGTTCTTGAAGAGACCTGAGCCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3817208 42 + 145441459 ------TAGAAGAAGAGGAGTAGGATGTATCTGTACTTAAGTGGCCGT i mm10.chr7 C 0 C 0 s canFam3.chr1 19727207 35 - 122678785 --------AACCATGAGGAAAAATGAGGTCCTGATGAGACTCA----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45523220 35756 + 49145316 I e rheMac3.chr19 60158965 71291 + 64156825 T a score=253231.000000 s hg38.chr19_GL949753v2_alt 289336 116 + 796479 AGCCTCTCCCCTGAGCTCTGCATTCTCC-------TAGTTCCCTGTGCCTCTCAACATG-ACTTTTATGGAGTTCCTCCATAAACCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCA s panTro4.chr19 59245742 116 + 63644993 AGCCTCTCCCCTGCGCTCTGCATTCTCC-------TAGTTCCCTGTGCCTCTCAACATG-ACTTTTATGGAGTTTCTCCATAAACCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096058 116 + 60714840 AGCCTCTCCCCTGCGCTCTGCATTCTCC-------TAGTTCCCTATGCCTCTCAACGTG-ACTTTTATGGAGTTCCTCCATAAACCATCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856256 116 - 106955855 AGCCTCTCCCCTGCGCTCTGCATTCTCC-------TAGTTCCCTATGCCTCTCAGCATG-ACTTTTACGGAATTCCTCCATAAACCCTCTCTCTGCTGGAGCACGGTTCCCTCCAGTCTCCTCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55212867 116 + 59248254 AGCCTCTCACCTGGGCTCTGCATTCTCC-------TAGTTCCCTATGCCTCTCGACATG-ACTTCTATGGAGTTCCTCGATAAGCCCTCCCTCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320568 116 + 51301725 AGCCTCTCCCCTGGGCTCTGCATTCTCC-------TAGTTCCCTATGCCTCTCGACATG-ACTTCTATGGAGTTCCTCGATAAGCCCTCCCGCTGCTGGAGCAGGGTTCCCTCCAGTCTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012360 116 + 50890351 AGCCTCTCCCCTGGGCTCTGCATTCTCC-------TAGTTCCCTATGCCTCTCAATATG-ACTTTTATGGAGTTCCTCGATAAGCCCTCCCTCTGCTGCAACAGGGTTCCCTCCAGTCTCCTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558976 113 + 49145316 AGCCTCTCCCCTGGGTTCTGCATTCTTA-------CATTCCTCTGTCTCTTGTGTCGTG-ACTT-TATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCG--TACCTCA i calJac3.chr22 I 35756 C 0 s mm10.chr7 3817250 124 + 145441459 AGTGTTTCTTCTGAGTTCCACTCTATCATTTATTGTAGATGCCCATCATTTTCACCATATAAGCTTATAGAGTTCTGGGATGAATGTTTCTTGTTATACAGCTGGTTCCCCTCTCTTATTCTTA i mm10.chr7 C 0 C 0 s canFam3.chr1 19727242 109 - 122678785 AATTTGTCCCCTG-ATTGAGTGTTCTTG-------TACCTTCCTGCATTTCTCATGATATAACTTTATAGA---CTGTAATGAACCCTTTCTCTGCTATAGAAATATGCCTC----TGTTCTCA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60158965 71291 + 64156825 T a score=50537.000000 s hg38.chr19_GL949753v2_alt 289452 18 + 796479 CTGAATTATTTCAGCTTT s panTro4.chr19 59245858 18 + 63644993 CTGAATTATTTCAGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096174 18 + 60714840 CTGAATTATTTCAGCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856372 18 - 106955855 CTGAGTTATTTCAGCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087674 18 + 64156825 TGGAACTAGTTCAGTTTT i rheMac3.chr19 T 71291 C 0 s macFas5.chr19 55212983 18 + 59248254 CTGAATTATTTCACCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320684 18 + 51301725 CTGAATTATTTcaccttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012476 18 + 50890351 CTGAATTATTTCACCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559089 17 + 49145316 TTGGGTT-CTTCAGCCTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3817374 18 + 145441459 CTAAATTCTTCAAACATT i mm10.chr7 C 0 N 0 s canFam3.chr1 19727351 18 - 122678785 TTGGATTCTTTCAGTCTC i canFam3.chr1 C 0 C 0 a score=302539.000000 s hg38.chr19_GL949753v2_alt 289470 150 + 796479 CCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTG-GGAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAA---GTGGCCCCC------AGAAGTCACTGAGCCCTT-TGTGCT-CTC-----TGTGCAGCCTGGGAC-ACAGGAGCACAT s panTro4.chr19 59245876 150 + 63644993 CCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTG-GGAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAA---GTGGCCCCC------AGAAGTCACTGAGCCCTT-TGTGCT-CTC-----TGTGCAGCCTGGGAC-ACAGGAGCACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096192 151 + 60714840 CCTTTGTTCTTTGAATTTAAACTTTGCTCCTGAGTCATTTG-GGAAAGAGCTTTCCTGCACCATGAAAGCTCAGGATCTGCAAGGAAA---GTGGCCCCC------AGAAGTTACTGAGCGCTT-TGTGCTCCTA-----CATGCAGCCTGGGAC-ACAGGAGCACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856390 151 - 106955855 CCTTTGTTCTTTGAATTTAAACTTTGCTCTTGAGTCATTTG-GAAAAGAGCTTTCCTGCACCGTGAAAGCTCAGGATCTGCAAGGAAA---GTGGCCCCC------AGAAGTCACTGAGCCCTG-TGTGCTCTTA-----TGTGCAGCCTGGGAC-ACAGGAGCACAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087692 154 + 64156825 CCTGTGTTCTATGAATTTAAACATTGCTCCTGAGTCATCTG-GGGGAGAGTTTTCTTACATCTCAGGGGCTCAGGATTTGCAACGAAA---GTGGTCCCC-AGTATAG-GGTCACTGAGCCCTG-TGTGCT-ATC-----TGTGCAGCCTGGGAC-ACAGGAGCACGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55213001 130 + 59248254 CCTTTGTTT--------------TTGCTCCTGAGTCATTTG-GGAAAGAGTTTTCCTGCACCGTGAAAGACCAGGATC--------------TGGTCCCC-GGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----TGTGTAGCCTGGGAC-ACGGGAGCACAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320702 141 + 51301725 cctttgttt--------------ttgctCCTGAGTCATTTG-GGAAAGAGTTTTCCTGCACCGTGAAAGACCAGGATCTGCAAGGAAA---GTGGTCCCC-AGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----GGTGCAGCCTGGGAC-ACGGGAGCACAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012494 141 + 50890351 CCTTTGTTT--------------TTGCTCCTGAGTCATTTG-GGAAAGAGTTTTCCGGCACCGTGAAAGATCAGGATCTGCAAGGAAA---GTGGTCCCC-GGTACAGAGGTCACTGAGCCCTG-GGTGCT-GTC-----GGTGCAGCCTGGGAC-ACGGGAGCACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559106 160 + 49145316 TCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTT-GGAATAAAGTTTACTTGAGCCCAAGAGCTCAAGATTAGTGAGAAGA---ATGATCTCC-CAACTAGAAAGAATTGAGCTCTTAAGTGCT-GTCTTAGATGTGTAATCTTGTGCAACAGGAACAC-- i calJac3.chr22 C 0 C 0 s mm10.chr7 3949074 159 + 145441459 ACTGTATTCTTTATGCTAAAAACATATGACTAAGTACTTTATAGCAACAATTTATCTGAATACAAAGGGATCAGGATTAGTGATAAAAAGCACCATTCAC-AGTTCAGAATAAAGGAAACCTCC-TGAGCA-CTC-----TGCTTAATCTACCAC-AAAGAATCACAT i mm10.chr7 N 0 N 0 s canFam3.chr1 19727369 143 - 122678785 CCAGTGTTTTGTGAATTCAGACTTTGCTTCTGAGTCCCTTT-GG----ACTCTTCCTGCATCCCT-TAGCTCAGAATTTAGTGGTACA---ATCATCTCTCAGTACAGAAGTATTTGGGCTCTTCTATTCT-CTG-----TGTTCATTCTGA----GCATGA------ i canFam3.chr1 C 0 C 0 a score=229378.000000 s hg38.chr19_GL949753v2_alt 289620 79 + 796479 AAGCCAATTCCCCCAGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGATGACGGGTTGGTCCT s panTro4.chr19 59246026 79 + 63644993 AAGCCAATTCCGCCAGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGATGATGGGTTGGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096343 79 + 60714840 AAGCCAATTCCCCCAGAGACGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCATGGAGGAGGGGTTGGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856541 79 - 106955855 AAGCCAATTCCCCCAGAGATGAGAGTTTCACCGATCCACCAGCTGAGGACCCAGGCTCCGTGGATGATGGCTTGGTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087846 79 + 64156825 AAGCCGATTCCCCCTGAGATGAGAGTTTCACAGATCCACCAGTGGAGGACCCAGGCTGCGTGGATGAAGGGTTGGTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55213131 79 + 59248254 GAGCCAATTCTCCCGGAGATGAGAGTTTCATGGATCCACCAGCTGAGGACTCAGGCTCCGTGCATGAGGGGTGGGTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320843 79 + 51301725 GAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACCCAGGCTCCGTGCATGAGGGGTGGGTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012635 79 + 50890351 GAGCCAATTCCCCCGGAGATGAGAGTTTCACGGATCCACCAGCTGAGGACTCAGGCTCCGTGCATGAGGGGTGGGTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559266 78 + 49145316 -AACAAATTCCCCCAGAGATAGAAGTTTCCATTTTTCAGTGGATGAGGACCCAGGCTCCGTGGACAAGGAGCTGGTCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19727512 79 - 122678785 AAGCTACTTCCTTTTGATAGGAGACCTTGTATTTTTCAACACTTTAGGATCCAGTGTCCATGGATAAGGGGTTGGTCTT i canFam3.chr1 C 0 I 2281 a score=73637.000000 s hg38.chr19_GL949753v2_alt 289699 29 + 796479 CAGGGGCTCCTGAAAGTCAGAATCACAAA------------ s panTro4.chr19 59246105 29 + 63644993 CAGGGGCTCCTGAATGTCAGAATCACAAA------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096422 29 + 60714840 CAGGGGCTCCTGAATGTCAGAAGCACAAA------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856620 29 - 106955855 CAGGGGCTCCTGAATGTCAGAATCACAAA------------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60087925 29 + 64156825 CAGGAGCTCCTGAATGTCAGGAGCACAAA------------ i rheMac3.chr19 C 0 I 48240 s macFas5.chr19 55213210 29 + 59248254 CAGGGGCTCCTGAATGTCAGAAACACAAA------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320922 29 + 51301725 CAGGGGCTCCTGAATGTCAGAAACACAAA------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012714 29 + 50890351 CAGGGGCTTCTGAATGTCAGAAACACAAA------------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559344 41 + 49145316 CAGCTGCTCTTGAAAGTCAGGAGCAGGAGGGCTGAGGGCTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19727591 2281 - 122678785 I a score=1179976.000000 s hg38.chr19_GL949753v2_alt 289728 665 + 796479 CAGCTGCCTCCCCTTGACGCCACCTCAACCACCTCACCTGGTGTTTCATCATACAATAAGTCTCTAGTCAGCTAACTATTCATATAGTCAGTCA-TATATATATACGTATGTATATAAA---------------tgtgtgtgtgtgtgtgtgtgtgtatatatatgtatatataaatatatatatatatatatatatGGTGTTA-CAGAGGCTCATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggttaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagcccaggtcatgccattgcactccagcttgggcaac-agggcaagagactccatctcaaac----------------aaacaaacaaaaaTTTCTGCTTTTATAAAGTGTGAGTCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAATACATTAAGCATGTAGATATACGTATAAAAAATATATGCAGATATACCTACACTT-ATATTCAGATG------------------TAACTTATA s panTro4.chr19 59246134 655 + 63644993 CAGCTGCCTCCCCTTCACGCCACCTCAACCACCTCACCAAGTGTTTCATCATACAATAAGTCTCTAGTCAGCTAACTATTCATATAGTCAGTCa-tatatatatatgtatgtatataaa---------------tgtgtgtgtgtgtgtgtgt--------------------------atatatatatatatatatGGTGTTA-CAGAGGCTCATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtgatggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagccgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagcccaggtcgtgccattgcactccagcttgggcgac-agggcaagagactccatctcaaactaacaaacaaacaaaccaacaaacaaaAATTTCTGCTTTTATAAGGTGTGAATCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAATACATTAAGCatgtagatatacatataaaaaatatatgcagatatacctacactt-atattcagatg------------------taacttata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56096451 637 + 60714840 CAGCTGCCTCCCCTTCATGCCACCTCAACCACCTCACCTGGTGTTTCATCATACAGTAAGTCTCTAGTCAGCTAATTATTCATATAGTCAGTCA-TATAGATAT--GTATGTATATAAg---------------tgtgtgtgtgtgtgtgtgt------------------------------------gtgtgtatgGTGTTA-CAGAGGCTCATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcac--gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaata-aaaaaatgagctgggcatggtggcacctgcctgtaatcccagctacttgggaggctgagacaggagaatcgcttgaacctaggaggcagaggttgcagtgagcccaggtaatgacattgcactccagcttgggcaac-agggcaagagactccatctcaaac----aaacaaacaaacaaacaaacaaaAATTTCTGCTTTTATAAAGTGTGAATCTAGGTGAGAAGACCAATAACAAACATGTAAAAGCCCTCCATGTCAAatatattaagcatgtagatatacatataaaaaatatatgcagatatacctacagtt-atattcagacg------------------taac--ata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102856649 660 - 106955855 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCATACAATAAGTCTCTAGTTAGCCAATTATTCATATAGTCAGTCA-TATAGATAT--GTATGTATATAAA---------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt------------gtgtgtgtgtgtgtgtATGGTGTTATCAGAGGCTCATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccgtctctactaaaaata-aaaaaatgagccaggcatggtggtgcctgcctgtaatcccagctacttgggaggctgagacaggagaatcgcttgaacctgggaggcagaggttgtagtgagcccaggtcgtgccattgcactccagcttgggcgac-agggtgagagactccatctcaaac--------aaacaaacaaacaaacaaaaaTTTCTGCTTTAATAAAGTGTGAATCTAGGTGAGAAGACCAATAACAAACACGTAAAAGCCCGCCATGTCAAATACATTAAGCATGTAGATATACATGTAAAAAATATATGCAGATATCCCTACACTT-ATATTCAGATG------------------TAACTTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213239 649 + 59248254 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCATACAATAAGTATCTAGTTAGCTGATTATTCATGTAGTCAGTCa-tatatatat--gtatgtatataaatgtgtgtggggtgtgtgtgtgtgtgtgtgtgtgt--------------------------gtgtgtatatatatatatGACGTTATCAGAGGC-CATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggctaggcacggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaagataaaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcggaggttgcagtgagcccaggtcgtgccactgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaaTTTCTGATTTTATAAAGTGCAAATCTAAGTGAGAAGACCAATAACAAACGTGTAAAAGCCCGTGATGTGAAATACATTAAGCATGTAGATATACATATAAAAAACATATGCAGATATACCTACACTT-ATATTCAGATG------------------TAACTTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47320951 632 + 51301725 CAGCTGCCTCCCCTTCACGCCACCTCAACCACCTCACCTGGTGTTTCATCGTACAATAAGTCTCTAGTTAGCTGATTATTCATGTAGTcagtca-tatatatat--gtatgtatataaa-----------------tgtgtgtgtgtgtgtgt--------------------------gtgtgtgtgtgtatatatgacgTTATCAGAGGC-CATAAAACA--ATTTCTGCTTTt------------------------------------------------------agggctaggcacggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctgaccaatgtggtgaaaccctgtctctactaaagacacaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcagaggttgcagtgagcccaggtcgtgccgctgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaatttctgattttataaagTGCAAATCTAAGTGAGAAGACCAATAACAAATGTGTAAAAGCCCGTGATGTGAAATACATTAAGCATgtagatatacatataaaaaatatatgcagaTATACCTACACTT-ATATTCAGATG------------------TAACTTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47012743 634 + 50890351 CAGCTGcctccccttcacgccacctcaaccacctcacctGGTGTTTCATCGTACAATAAGTCTCTAGTTAGCTGATTATTCATGTAGTCAGTCa-tatatatat--gtatgtatataaa---------------tgtgtgtgggtgtatgtgt--------------------------gtgtgtgtgtgtATATATGATGTTATCAGAGGC-CATAAAACA--ATTTCTGCTTTT------------------------------------------------------AGggctaggcatggtggctcatgcctgtaattccagcactttggg------aggagggcagatcac--gaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaagatacaaaaaattagttgggcgtggtggtacatgcttataatcccagctactcgggcgtctgaaacaggagaatcgcttgaaactgggaggcggaggttgcagtgagccgaggtcgtgccactgcactccagcttgggcgac-agggca--agattccgtctcaaac------------aaacaaacaaaaaacaaTTTCTGCTTTTATAAAGTGCAAATCTGCGTGAGGAGACCAATAACAAACATGTAAAAGCCCGCGATGTGAAATACATTAAGCatgtagatatacatataaaaaatatatgcagatatacctacactt-atattcagatg------------------taacttata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559385 674 + 49145316 CCACTGCCTCTGCTTCGTGCTGCCTCAGCCAGCTCCCCTGGGGTTTCCTTAACCATTTAATGTCTCGTTAACTGACTCTTCATATAGTTAAGAACTATCTACA---ATGTG-ATATAAA---------------TACAAAAATGTATTTTTTT-------------------------------------TCTAAATGATAATG-GGTGGGATAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCAAggctgggtgtggtggctcacacctgtcatcctagtactttgggcagctgaggcaagcagattacctgaggtcaggaactcaagaccagccttacc-atatggagaaaccccatctctactaaaaat--acaaaattaacc-ggcatgatggagcatgcctgtaatcccagctacttgggaggctgagtcaggagaatcacttgaatctgggaggtggaggtttcggtgagccaagatcgtaccactgcactccagcctgggcaacaagagtg--aaacccca--tcaaaa------------aaacaaacaaaaaCCCATACCCGAACTTAAA----GTAAA--------ATAAAAACAATATCAAAA----AAACATACCCGATG-AAAAAATATTAAGCATAGGAATGAATG------AAATAT---TAAGTATTCCTATGCTTAATACTTATGTGTGTGTCTGTGTAGGTTCATAACACATA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19727591 2281 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=44641.000000 s hg38.chr19_GL949753v2_alt 290393 19 + 796479 TAACCATACATAAATATGT s panTro4.chr19 59246789 19 + 63644993 taaccatacataaatatgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097088 19 + 60714840 taaccatacataaatatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857309 19 - 106955855 TAACCATACATAAATATGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213888 19 + 59248254 TAACCATACATAAGTATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321583 19 + 51301725 TAACCATAcataagtatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013377 19 + 50890351 taaccatacataaatatgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560059 18 + 49145316 TATTCATATA-AAATATGT i calJac3.chr22 C 0 I 1449 s canFam3.chr1 19729872 19 - 122678785 TAACTTAAAATAATTAAGT i canFam3.chr1 I 2281 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=438734.000000 s hg38.chr19_GL949753v2_alt 290412 221 + 796479 -ATATATGTAAAACTTTAGATATTTATTTAAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCGGTTTAGAAATAAAAAATAAAATTTCAATTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA s panTro4.chr19 59246808 221 + 63644993 -atatatgtaaaactttagatatttatttaAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCGGTTTAGaaataaaaaataaaatttcaattttcttatagttaatataaaCTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097107 221 + 60714840 -atatatgtaaaactttagatatttatttaAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCAGTTTAGaaataaaaaataaaatttcaattttcttatagttaatataaattttatCAGTAAATTTGGGGAGATCAGTTGAAAGATAATTGAAAGGGAAAAATGTTATAGCAAGCTAAAATGAAATTAAATGAATATACTCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857328 221 - 106955855 -ATATATGTAAAACTTTAGATATTTATTTAAGAT-GCAGTTACATGCATATTAATA-----------------------CTTGAAGTCACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAAATTTCAGTTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAATGGAAAGATAATTGAAAAGGAAAAATGTTATAGCAAGCTAAACAGAAATTAAATGAATATACTCAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55213907 221 + 59248254 -ATATATGTTAAACTTTAGATATTTATTTAAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAATTTTCAATTTTCTTATAGTTAATATACATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAAATGTCATAGCAAGCTAATATGAAATTAAATGAATATACTCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321602 221 + 51301725 -atatatgttaaacTTTAGATACTTATTTAAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGTGACAAAAATTGATATGcagtttagaaataaaaaataaattttcaattttcttatagttaatataaattttatcagTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAAATGTCATAGCAAGCTAAtatgaaattaaatgaatataCTCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013396 217 + 50890351 -atatatgttaaactttagatatttatttaAGAT-GCAATTACATGCATATTAATA-----------------------CTTGAAGGGACAAAAATTGATATGCAGTTTAGAAATAAAAAATAAATTTTCAATTTTCTTATAGTTAATATAAATTTTATCAGTAAATTTGGGGAGATCAGTTGAAAGATAATGGAAAGGGAAAA----TATAGCAAGCTAATATGAAATTAAATGAATATACTCAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19729891 244 - 122678785 AATTTGGGTATCACTTTAGATGTTTTCTTAAAACAACACTTAGCTTTGTGTTAACATCTTGTCATTATTATATATATTTTTTGCCTTAAATAAGACTAGTGCATAATCTAGAAATAAACAGGTAAGTTTCAATGTTTTTGCAGTTGATATAATGATTATCAGTAAATTAAAGGAGATCAGTTGCAAAGCAATGGGAAGGTGGAGAATCAAAACTAAGTTAATA--GAATAAAATGAATATAACTGg i canFam3.chr1 C 0 I 577 e calJac3.chr22 45560077 1449 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=315727.000000 s hg38.chr19_GL949753v2_alt 290633 180 + 796479 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcatggtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa s panTro4.chr19 59247029 180 + 63644993 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcacggtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097328 180 + 60714840 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATGAATCAggctgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857549 179 - 106955855 ACTAAAAGCTTTCTCACGTGTATATCTTACTTAGAAATATAAATGAATCAggctggg-acggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctactaaaaatacaaga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214128 174 + 59248254 ACTAAAAGCTTTCTCATGTGTATATCTTACTTAGAAATATAAATTAATCAggctgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactgaaaat------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321823 174 + 51301725 ACTAAAAGCTTTCTCATGTGTATATCTtacttagaaatataaattaatcaggctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctacttaaaat------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013613 178 + 50890351 ACTAAAAGCTTTCTCATGTGTATATCTCACTTAGAAATATAAATGAATC-ggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagatgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaacacaa-a i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19730135 577 - 122678785 I e calJac3.chr22 45560077 1449 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=488992.000000 s hg38.chr19_GL949753v2_alt 290813 277 + 796479 aaattagcccggcatggtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggacaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaacaaac-aaaaGAAATATACATGAATCAAATACTTCACTTAAGAATAA----AGTAGTTGAAGAATTTTTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGA s panTro4.chr19 59247209 280 + 63644993 aaattagccgggcatggtggtgggtgcctgtagtcccagctactcgg-aggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcacgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaataaac-aaaaGAAATATACATGAATCAAATACTTCACTTAAGAATAATTAAAGTAGTTGAATAATTTTTTAAATTAGACTAAATGTACACATTCTTGTGAACGGAACTTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097508 281 + 60714840 aaattagccgggcatggtggcgggcgcctgtagtcccagctattcgggaggctgaggcaggacaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccaggctgggcgacagagcaagactccatctcaaaaacaaaaacaaacaaacaaaa-aaaaGAAATATACATGAATCAAATACTTCACTTAAAAATAATTAAAGTAATTGAAGAATTATTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102857728 282 - 106955855 aaattagccaggcatggtggtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggagcttgcagtgagccgagatcgcaccactgcactccaggctgggcgacagagcaagactccatctcaaaaataaaaacaaacaaacaaacaaaaaGAAATATAAATGAATCAAATACTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTATTTAAATTAGACTAAATGTACACATTCTTATGAACGGAACTTGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214302 260 + 59248254 --actagccaggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggggtgaacccgggaagcagagcttgcaatgagctgagactgcaccactgcactccagcctgggtgacagagcaagactccatctc-----aaaaaaaaaa----------aaaagaaatataaaTGAATCAAATATTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTCT-----TTAGACTAAATGTACACATTCTTATGAACAGAACTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47321997 265 + 51301725 --actagccaggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggggtgaacccaggaagcagagcttgcaatgagctgagactgcaccactgcactccagcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaaa----------aaaagaaatataaatgaatcaaatatttcacttaaaaataattaaagtagtTGAAGAATTCT-----TTAGACTAAATGTACCCATTCTTATGAACAGAACTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47013791 267 + 50890351 aaactagccgggcgaagtggcgggcgcctgtagtcccagctacttgggaggctgaggtaggagaatggggtgaacccaggaggcagaacttgcaatgagctgagattgcaccacggcactccagcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaga----------aaaagaaaTATAAATGAATCAAATATTTCACTTAAAAATAATTAAAGTAGTTGAAGAATTCT-----TTAGACTAAATGTACACATTCTTATGAACAGAACTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45561526 208 + 49145316 AAATTAgccagatgtggtggtgcacacctgcaattccagctactagggaaactgaggcaggaggattgcttgagcccaggagttttaggttgcagtgagctatgatcctgctactgtggttcagcctgggcaacagagtgagaccccatctctaaaaataaaataaa---------------------------aTCAAG---ttaaattataaa-----------------------------ttaaaataaaaataGAAGTGCTA--------------- i calJac3.chr22 I 1449 T 38007 e canFam3.chr1 19730135 577 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=89773.000000 s hg38.chr19_GL949753v2_alt 291090 44 + 796479 AAACACTTATTAACTTCATTAA-TAAACTTCAATTTTATATATTA s panTro4.chr19 59247489 43 + 63644993 AAACACttattaa-ttcattaa-taaacttcaattttatatatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097789 44 + 60714840 AAACACTTATTAACTTCATTAA-TAAACTTCAATTTTATATATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858010 44 - 106955855 AAACACTTATTAACTTCATTAA-TAAACTTCAATTTTATATATTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214562 44 + 59248254 AAACACTTATTAACTTCATTCA-TAAACTTCAATTTTATATATTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322262 44 + 51301725 AAACACTTATTAACTTCATTCA-TAAActtcaattttatatatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014058 44 + 50890351 AAACACTTATTAACTTCATTCA-TAAACTTCAATTTTATATATTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523727 45 + 49145316 AAACACTTGTGAAGTTCATGAAGGAAACCTCCATTTTTAATGTGA i calJac3.chr22 T 38007 C 0 e canFam3.chr1 19730135 577 - 122678785 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=144537.000000 s hg38.chr19_GL949753v2_alt 291134 81 + 796479 ATAATAGAAATACTTG-CTATTAACAACTAAT---TTTATACAGCAAATGTAAATATTGAATTATG-CCCCCAGGACAATGGGAGT s panTro4.chr19 59247532 83 + 63644993 ataatagaaatatttGGCTATTAACAACTAAT---TTTATACAGCAAATGTAAATATTTAATTATGGCCCCCAGGACAATGGGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097833 81 + 60714840 ATAATAGAAATACTTG-CTATTAACAACTAAT---TTTATACAGCAAATGTAAATATTGAATTATG-ACCCCAGGACAATGGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858054 81 - 106955855 ATAATAGAAATACTTG-CTATTAACAACTAAT---TTTATACAGCAAATGTAAATATTGAATTATG-CCCCCAGGACAATGGGAGT i nomLeu3.chr10 C 0 I 481 s macFas5.chr19 55214606 80 + 59248254 ATAATAGAAATACTTG-TCGTTAACAACTAAT---TTTATAAAGCAAATGTAAATATTGAATTACA--CCCCACAACAATGGGAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322306 80 + 51301725 ataatagaaatacTTG-TCGTTAGCAACTAAT---TTTATAAAGCAAATGTAAATATTGAATTACA--CCCCACGACAATGGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014102 80 + 50890351 ATAATAGAAATACTTG-CCGTTAACAACTAAT---TTTATAAAGCAAATGTAAATATTGAATGACA--CCCCACGACAATGGGAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523772 84 + 49145316 AGGGGAGGAAGACTTG-ATGTTAATAAAAAATGGATGTCTACATTGAATATATAAATTAAATCAAA-GCCCAATGAAAGCAGAAGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19730712 79 - 122678785 gccAGAAAAACACTTT-ATAATCACAAATTAT---TCTCTATAAAGGATATATGCATTTCATATAA-ACCCAATGA-AATTGGAG- i canFam3.chr1 I 577 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=86135.000000 s hg38.chr19_GL949753v2_alt 291215 40 + 796479 GGAATTACTTGTTTTTAAA-TCATAAATCCATATATCTTAA s panTro4.chr19 59247615 41 + 63644993 GGAATTACTTGTTTTTAAAATCATAAATCCATATATCTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097914 40 + 60714840 GGAATTACTCATTTTTAAA-TCATAAATCCATATATCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858616 40 - 106955855 GGAATTACTTGTTTTTAAA-TCATAAATCCATATATCTTAA i nomLeu3.chr10 I 481 C 0 s macFas5.chr19 55214686 40 + 59248254 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322386 40 + 51301725 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014182 40 + 50890351 GGAATTACTGGTTTTTAAA-TCATAAATCCACATATCTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523856 39 + 49145316 AGAATTAACTATTTTAAAA-TAATAGATTCAT-TAACTGAA i calJac3.chr22 C 0 I 10 s canFam3.chr1 19730791 30 - 122678785 ----------ATTTTAAAG-TCCTAAATCCTCATAATGTAA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=6090.000000 s hg38.chr19_GL949753v2_alt 291255 5 + 796479 AGAGA---- s panTro4.chr19 59247656 5 + 63644993 AGAGA---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097954 5 + 60714840 AGAGA---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858656 5 - 106955855 AGAGA---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214726 5 + 59248254 AGAGA---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322426 5 + 51301725 AGAGA---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014222 5 + 50890351 AGAGA---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19730821 5 - 122678785 ----ATTTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45523895 10 + 49145316 I e rheMac3.chr19 60087954 48240 + 64156825 I a score=216463.000000 s hg38.chr19_GL949753v2_alt 291260 98 + 796479 CAAATTTAAATATTCAAATATTGTTTTAAAAGAT-TCAG--AAGAAGAGAGA------AAAAATAAACAAGTATGCCCAGAAAATGCAGAGCAGCAATGAACAGCAG s panTro4.chr19 59247661 98 + 63644993 CAAATTTAAATATTCAAATATTGTTTTAAAAGAT-TCAG--AAGAAGAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGCAGCAATGAACAGCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56097959 98 + 60714840 CAAATTTAAATATTCAAATATTGTTTTAAAAGAT-TCAG--AAGAACAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGTAGCAATGAACAGCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858661 98 - 106955855 CAAATTTAAATATTCAAATATTGTTTTAAAAGAT-TCAG--AAGAAGAGAGA------AAAAATAGACAAGTATGCCCAGAAAATGCAGAGCAGCAATGACCAGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55214731 98 + 59248254 CAAATTTAAATATTCAAATATTGTTTTAAAAGAT-TCAG--AGGAAGAGAGA------GAAAATAGACAAGCATGCCCAGCAAATGCAGAGTAGCAATGAACAGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322431 98 + 51301725 CAAATTTAAATActcaaatattgttttaaaagat-tcag--aagaagagaga------gaaaatagacaaGCATGCCCAGCAAATGCAGAGTAGCAATGAACAGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014227 98 + 50890351 CAAATTTAAATATTCAAATATTGCTTTAAAAGAT-TCAG--AAGAAGAGAGA------GAAAATAGACAAGCATGCCCAGCAAATGCAGAGTAGCAGTGAACCGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523905 100 + 49145316 TAAATTTATATATTCAAGTATTGCTTTAATAGTT-TTGGAAAAGAGGAGAGT------AACGACGGACAAGTACACACAGAAAACACAGAGTAGAAGTGAGTGACAC i calJac3.chr22 I 10 C 0 s canFam3.chr1 19730826 104 - 122678785 -TATTTTGCATCTGCAAGGCTCACCTCGAACGTTCTGAG--AAGCAGTCAGGGTGGTTGACACTGGACAAGTTTCCACACACAATGCAGCGCAGACACGAATTGCAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60087954 48240 + 64156825 I a score=1855273.000000 s hg38.chr19_GL949753v2_alt 291358 681 + 796479 ACAAGACGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGCGGCCCCTCCTTTG-TCTCAGGGGTGCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGGCGGTGTGAGTGGTACCCACA-GCTGGGGCGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCACCGTCAGATCCCACCGAGGCCTGAGCAGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTCCGTCTGTCCTCTCTCCAACT-CGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCTGACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACGCTTCGTGTGACATGTGAGAGA-GAGGAGATTCTAAA-CAGTGGGG-TTTTTACACATCTTTGCTTTCT-CATAATATTGTGGCTTCGTCTCACGAACCTCAGACCCCAGCACTGATGGATATGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT s panTro4.chr19 59247759 681 + 63644993 ACAAGACGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGTGGCCCCTCCTTTG-TCTCAGGGGTGCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGGCCGTGTGAGTGGTACCCACA-GCTGGGGCACTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCTTCATCACAGTCAGATCCCACAGAGGCCTGAGCAGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAAGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTCCGTCTGTCCTCTCTCCAACT-CGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCACATCCTGCTGACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACGCTTCGTGTGATGTGTGAGAGA-GAGGAGATTCTAAA-CAGCGGGG-TTTTTACACATCTTTGCTTTCT-CACAATATTGTGGCTTCGTCTCACGAATCTCAGACCCCAGCACTGATGGATATGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098057 681 + 60714840 ACAAGATGTGCTGTGAATAAGTTCCTAACTTCCTCCAGGGAGC---AGGTGCGCGGCCCCTCCTTTG-TCTCAGGGGTGTCCTGA---GCACAGAGGCCTCCAGGTGAGCACAAGAGGGGCCTTGTGAGTGGCACCCACA-GCAGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCACAGTCAGATCCCACTGAGGCCTGAGCGGCCTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGTTCTCATGGAAATGAGAAGTGAGAGCTGCCAAGGGAGCGTCCGTCTGTCCTCTGTCCAACT-CGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCTGACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCCACAGGA--CAGGGTAGGGGCCTGGGAGTCTTGTAAAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACACTCCGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGG-TTTTTACACGTCTTTGCTTTCT-CATAATATTGTGACTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102858759 675 - 106955855 ACAAGATGTGCTGTGAATAAGTTCCTAATTTCCTCCAGGGAGC---AGGTGCACGGCCCCTCCTCTG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCAGTTGAGGACAGGAGGGGCCGTGTGAGTGGCACCCACG-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGCGTGGACTCCAGCCTCATCA--GTCATATCCCACTGAGGCCTGAGCAGTGTCC-TCCCCTGTCCTGAGTGGGCTCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCGGG--CTCTTGGAAATGAGAAGTGAGAGTTGCCAAGGGAGCATCTGTCTGTCCTCTCTCCAACT-CGCCTGCCTCTATTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCTGACCAGCTCTGTTCTCCTTCTTCTACTCA---TCACTCATCCCGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTAGAAAATCTG-AAACACTTTGTGTGA--TGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGG-TTTTTACACATCTTTGCTTTCT-CATAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATATGATTCCACGTACCTGCAGCAGCCCCTCTTGGCTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136194 683 + 64156825 ACAAGCCGTGCTGTGACTAATTTCCTAACTCA-TCCAGGGAGC---AGGTGCACAGCCCCTCCTTAG-TCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGATCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCC-TTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGTTGAGGGG-TTCACCCTCAGGAGCTCTTGGAAATGAGAAATAAGAGCTGCCAAGGGAGCGTCCGTCTTTC--CTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTG-TCCAAGTCAGG-CTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCA---TCACCCATCTTGCAGGA--CAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGGGTG--TTGCTTTTAGTAGAAAATCTG-AACCACTTTGTGTGATACATGAGAGA-GGGAAGATTCTAAACCAGTGGGG-TTTTTACAAATCTTTGCTTTCT-CCTAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGATACAATTACACGTACCTGCGGCTGCCTCTCCTGGCTTTGT i rheMac3.chr19 I 48240 C 0 s macFas5.chr19 55214829 682 + 59248254 ACAAGATGTGCCGTGAATAAGTTCCTAAGTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTCG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGGTTGAAGACAGGAGGGGCCATGAGAGTGGCACCCACA-GCTGGGGTGCTTCTCTTTAAAGGAGCAGGTCTGGGGTGGGTTCCACCCTCATCACAGTCAGATCCCACCGAGGCCGGAGCAGCGTCC-TCCCCTGTCCTGAGTGGGCCCAGGGACC-CTGCAGGTGTGGGTGAGGGGCTCCATCTTCAGGATCTCATGGAAACAAGAAGTGAGAGCTGCCAAGGGAGGGTCCATCTGTCCTCTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCACCAGCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCTCACCAGGTCTGTTCTCCTTCCTCTACTCA---TCGCTCATCCTGCAGGA--TAGGGTGGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTAGAAAATCTGAAACAACTTCGTGTGATGTGTGAGAGA-GGGGAGATTCTTAA-CAGTGGGGTTTTTTGTAAATCTTT-CTTTCT-CGTAATTTTGTGGCTTCATCTCACAAATCTCAGACCCCAGGATGGATAGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47322529 662 + 51301725 ACAAGATGTGCCGTGAATAAGTTCCTAACTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTAG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGCTTGAAGACAGGAGGGGCCATGAGAGTGGCACCCACA-GCTGGGGTGCCTCTCTTTAAAggagcaggtctggggtgggttCCACCCTCATCACAGTCAGATCCCACCGAGGCCGGAGCAGCGTCC-TCCCCTGTCCTGAGTGGGCCCAGGGACC-CTGCAGGTGTGGGTGAGGGGCTCCATCTTCAGGATCTCATGGAAACAAGAAGTGAGAGCTGCCAAGGGAGCGTCCATCTGTCCTCTCTCCAACT-TgcctgcctctcttcctcctccatcagCCCCAGCATCTTCCCCATGTTCCAAGTCAGGCCTGGACCCCAAATCCTGCTCACCAGGTCTGTTCTCCTTCCTCTACTCA---TCGCTCATCCTGCAGGA--TAGGGTAGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--TGGTTTTTAGTagaaaatctg-aaacactttgTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-cagtggggttttttgt---------------------ttttgtggcttCATCTCACGAATCTCAGACCCCAGGACGGATGGATACGATTACATGTACCTGCAGCTGCCCCTCTTGGCTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47014325 680 + 50890351 ACAAGATGTGCCGTGAATAAGCTCCTAACTTACTGCTGGGAGC---AGGTGCACGGCCCCTCCTTCG-TCTCAGGGGTGCCCTGA---GCAAAGAGGCCTCCGGTTGAAGACAGGAGGGGCCATGAGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGCCTGGGGTGGGTTCCA--CTCATCACAGTCAGACCCCACTGAGGCCGGAGCAGCGTCCTTCCCCTTTCCTGAGTGGGCCCAGGGACC-CCGCAGGTGTGGGTGAGGGGCTCCATCCTCAGGATCTCATGGAAACGACAAGTGAGAGCTGCCAAGGGAGCGTCCATCTGTCCTCTCTCCAACT-TGCCTGCCTCTCTTCCTCCTCCACCAGCCCCAGCATCTTCCCCATATTCCAAGTCAGGCCTGGACCCCAAATCCTGCTCACCAGGTCTGTTCTCCTTCCTCTACTCA---TCACTCATCCTGCAGGA--TAGCGTGGGGGCCTGGGAGTCTTGTAGAGCT-------GCA--CGGTTTTTAGTAGAAAATCTG-AAACACTTTGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTTGTAAATCTTT-CTTTCT-CATAATTTTGTGGCTTCATCTCACGAATCTCAGACCCCAGGACGGATGGATACGATTACACGTACCTGCAGCTGCCCCTCTTGGCTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524005 639 + 49145316 ACAAGACGGGCTGTGGCTGATTCCCTAACTCACTCCAGGGAGC---AGGTACATGGCCTCTCCTTAG-TCTCAGGGGTGTCCTGA---GCACAGAGGCCACCAGGTGAGTACAGGAGGGGCCATGTGAGTGGTACCCACA-GCTGGGGTGCTTCTCTCTAAAGCAGCAGGTCTAG-GTGAACTCCAGCCTCATCCCAGTCAGATCCCACTGAAGCCTGAGCAGCTTCC-CCTCCTGTCCTGAGAGGGCTGTGGGATA-CTGCATGTGTGGGTGAGGGGCTCCATCCTCAGGGGCTCTTGGAAATGAGAAATCAGAGCTGCAAAGGGAGTGACTATCTGTCCTCTCTCCAGCT-TGCCTGCCTCTCTTCCTCCTTCATCAGTCCCAGCATCTTCCCTGTG-TCCAAGTCAGG-CTGAACCCCAAATCCTGCTGACCCAAGCTATTCTCCTTTCTCTTCCCA---TCACACATCCCACAGGA--CCAGGT------CTAGAAG-ATTGGAGAGCT-----------------TTTGTT------TCTG-ACG-----------------GAGAGAGGGGGAGATTCTAAAACAGTGGGG--CTTTGTAAACTTGT-TACTTT-CAAAATACTGTGGCTTTGTCTTACTAAGCTGAGATCCCAGGAGTGATGAGTGAAACCGCGGGCACCTGC-TCCATCTCCGTTGGCTTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19730930 650 - 122678785 AC-AGACACACTGC--ACAGCATCCAAGGGGACTCCTGTGTGCTCTGTCTGTGTGAACCTACCTTTGATGTCAGGTGGGCACTGAGGGGCATGGAGGCCCCGAGGGGAGCACAG--GGGGCTGTG-GAGCGGTGCTCATAGGCAGGGAGGCATCTCTCT--AGGAATGTGTCTGGTAAGGGCTCCACCTGCGCTCTCAGCAAACCCCACCTTGGTCTCAGCAGC-TCC-AGGCCTGATGTGAGAGGGCTCAGAGACCTCCTCAGGTGTGAGTGAGGGGCTCCATACTCAGGGTCT-TTGGAAATTGGGAGGGAATGTGGAC------------------CATCATTACAACTGTCCCAGACTC---TCCTCCTCCATCATCCC--ATATCCTGCCTGTGCTCTGAGTCAGGCCTGGACACCAAGTGCTG-----CAAAACTGCCCCTCTTCATC--CTCAATCGCACACGTTCTCCAAAACCTCGCCTAGGAGTTGAGGTGTGCTGACAAGGG-------GCAGGTGGCTTTTAG----AAAATTG-CACGGTTTTGTACGGGATGAGGAGGA-GCTGAGATGATCAATCAGTGGG--CATTTCCTAATCTGTGCTGTCTCCATGCTACTGAGAATACTTCTTGTTCTGCTAAGACCCCCGC-CTGAGGGACCAAATCATATGCATCTGC----GTTTCCCTGGGCTTCtt i canFam3.chr1 C 0 I 1650 a score=99214.000000 s hg38.chr19_GL949753v2_alt 292039 40 + 796479 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG s panTro4.chr19 59248440 40 + 63644993 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098738 40 + 60714840 AGACCTTGCGAGGCATAGCTATTGGCAAGAGCAGACCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859434 40 - 106955855 AACCCTTGCGAGGCATAGCTATTGGCAAGAGCGGACCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136877 40 + 64156825 AACCCTTGCAACACATAGTTATTGGTAGAAGCCGACCAGG i rheMac3.chr19 C 0 T 1220 s macFas5.chr19 55215511 40 + 59248254 AACCCTTACGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323191 40 + 51301725 AACCCTTACGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015005 40 + 50890351 AACCCTTGCGAGGTGTCGCTATTGGCAAGAGCAGACCAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524644 40 + 49145316 AACCCTTACAAGCCTCAGTTATTGGGGGAATCAGGACAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I a score=184795.000000 s hg38.chr19_GL949753v2_alt 292079 89 + 796479 ---TCTTAGGGTGAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATGAGGGGGC--TTTG s panTro4.chr19 59248480 89 + 63644993 ---TCTTAGGGTGAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATGAGGGGGG--TTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098778 89 + 60714840 ---TCTTAGGGTTAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGCCACATCTCAGATGCCCCACAAGGTCAGAAATCAGGGGGA--TTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859474 91 - 106955855 ---TCTTAGGGTTAGTGATGGGAGCTGCTTTTCTAGGTCTAGGATGAGTCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGGGCTTTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215551 89 + 59248254 ---TCTTAGGGTGACTGATAAGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323231 89 + 51301725 ---TCTTAGGGTGACTGATAGGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015045 89 + 50890351 ---TCTTAGAGTTACTGATAGGAGCTGCTTTTCTAGGTCTGGGATGAGCCACATCTCAGATGCCCCAGAAGGTCAGAAATGAGGGGGT--TTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524684 83 + 49145316 GCCAGAGAGGGTTGCATATGAGAGC---------AAGTCTAGGTTAAGCCACATCTCAGATGCCCCAAAAAGTCAGAAATGAGGAGGC--TTTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=32043.000000 s hg38.chr19_GL949753v2_alt 292168 14 + 796479 GGG--GTCACTTCCAA- s panTro4.chr19 59248569 14 + 63644993 GGG--GTCACTTCCAA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098867 14 + 60714840 GGG--GTCACTTCCAA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859565 14 - 106955855 GGG--GTCACTTCCAA- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215640 14 + 59248254 GGG--GTCACTTCCAA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323320 14 + 51301725 GGG--GTCACTTCCAA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015134 14 + 50890351 GGG--GTCACTTCCAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524767 16 + 49145316 GGGGAGTCACCTCCAG- i calJac3.chr22 C 0 I 19113 s mm10.chr7 3822177 15 + 145441459 GGA--GCTACTCACATA i mm10.chr7 N 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=481265.000000 s hg38.chr19_GL949753v2_alt 292182 195 + 796479 GCTCAGGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCACGTCTGTCCTCCTTGTAGAGAGCAAACCTGTCATAGCCAACATCAGAGTGATACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGCGGGGTCAGGAGGGAGGGCTTTCTAGACACACCTGGAA s panTro4.chr19 59248583 194 + 63644993 GCTCAGGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCATGTCCGTCCTCCTTGTAGAGAGCAAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCC-GGGACCACAACAGGGCCCTGCGGGGTCAGAAGGGAGGGCTTTCTAGACACACCTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56098881 195 + 60714840 GCTCAGGGGGAAGTCAGCCTGGAAGAGCCCAGCCTGGGGCTGCCAGCCAG-----TGGAGGAGGTCATGTCTGTCCTCTTTGTATAGAGCAAACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGTACCACAACAGGGCCCTGTGGGGTCAGGAGGGAGGGCTTTCTAGACACACCTGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859579 195 - 106955855 GCCCAAGGGGAAGTCAGCCTGGGAGAGCCCAGCCTGGGGCTGCCGGCCAG-----TGGAGGAGGTCATGTCTGTCCTCCTTGCACAGAGCGAACCTGTCATAGCTGACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGCGGGGTCAGGAGGGAGGGCTCTCTAGACACGCCTGGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215654 198 + 59248254 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCCGGGGCTGCTGGCCAGGGTGCTGGAGGAGGTCATGTCTGTTCTCCGTGTATAGTG--AACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGTGGGGTCAGGAGGAAGGGCATTCTAGACACACCTGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323334 198 + 51301725 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCTGGGGCTGCTGGCCAGGGTGCTGGAGGAGGTCATGTCTGTCCTCCGTGCATAGTG--AACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTGTGGGGTCAGGAGGAAGGGCTTTCTAGACACACCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015148 198 + 50890351 GCCCAGGGGGAAGTCATCCTGGGAGAGCCCAGCCCGGGGCTGCTGGTCAGGGTGCTGGAGGAGGTCATGTCTGTCCTCCGTGTATAGTG--AACCTGTCATAGCCAACATCAGAGTGACACTGGAGGGTCAGGTTCTCTCCAGGGACCACAACAGGGCCCTACGGGGTCCGGAGGGAGGGTTTTCTAGACACACCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543896 200 + 49145316 GCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGTCTGCCGGCCAGGGCGCTGGAGGAGGTCAGGTCCCCAGTCCTTGTACAGAGTGAACCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCCTCTCCCCAGGGGCCACGACAGGACCCGGCTGCACTGAGAGTGATGGCTTCTCAGAAACACCTGGGA i calJac3.chr22 I 19113 I 19641 s mm10.chr7 3822192 200 + 145441459 GCCCAGTGTGAAGTTGGCCATAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCTTGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGAAACACTGCAGGGTGAGGGTCATTCCAGGGTCCAGGATATGGCCTTGGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAGAG i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=78294.000000 s hg38.chr19_GL949753v2_alt 292377 44 + 796479 GGATAAAGGAGCCGG---GACTGCAGGGGCTGGTTCCTCCTATAAAC s panTro4.chr19 59248777 44 + 63644993 GGAAAAAGGAGCCAG---GACTGCAGGGGCTGGTTCCTCCTGTAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099076 44 + 60714840 GGAAAAAGGAGCCGG---GACTGCAGGGGCTGGTTCCTCCTATAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859774 44 - 106955855 GGAAAAAGGAGCTGA---GACTGCAGGGGCCAGTTTCTCCTGTAAAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215852 43 + 59248254 GGG-AAAGGAGCCGG---GAGTGCAGGGGCTGGTTCCTTCTGTAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323532 43 + 51301725 GGG-AAAGGAACCAG---GAGTGCAGGGGCTGGTTCCTTCTGTAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015346 43 + 50890351 GGG-AAAGGAGCCGG---GAGTGCAGGGGCTGGTTCCTTCTGTAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563737 44 + 49145316 GGAAAGAGGAGCCAG---GACTCAGATGGCCGATTGCCCCTATGCCC i calJac3.chr22 I 19641 C 0 s mm10.chr7 3822392 44 + 145441459 ---GGAAGGTGACAGCTAGAGACTGAGGTTTGGTTCTTACCAAACAC i mm10.chr7 C 0 I 1466 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=32731.000000 s hg38.chr19_GL949753v2_alt 292421 18 + 796479 C-TCCTTCTGGAGTCTCCC s panTro4.chr19 59248821 18 + 63644993 C-TCCTTCTGGAGTCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099120 18 + 60714840 C-TCCTTCTGGAGTCTCCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859818 18 - 106955855 C-CCCTTCTGGAGTCTCCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215895 18 + 59248254 C-TCCGTCTGGAGTCTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323575 18 + 51301725 C-TCTATCTGGAGTCTTCt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015389 18 + 50890351 C-TCCGTCTAGAGTCTTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563781 19 + 49145316 CTTCCTTCCGTAGTCTTCC i calJac3.chr22 C 0 C 0 e mm10.chr7 3822436 1466 + 145441459 I e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=13956.000000 s hg38.chr19_GL949753v2_alt 292439 5 + 796479 TTGCT s panTro4.chr19 59248839 5 + 63644993 TTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099138 5 + 60714840 TTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859836 5 - 106955855 TTGCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215913 5 + 59248254 TTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323593 5 + 51301725 ttgct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015407 5 + 50890351 TTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563800 5 + 49145316 TCACT i calJac3.chr22 C 0 I 20 s mm10.chr7 3823902 5 + 145441459 ttgtt i mm10.chr7 I 1466 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=26844.000000 s hg38.chr19_GL949753v2_alt 292444 15 + 796479 CTGtttttctttttc s panTro4.chr19 59248844 15 + 63644993 CTGtttttctttttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099143 15 + 60714840 CTGTTTttctttgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859841 15 - 106955855 TTGGGTTTCTTTCTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55215918 15 + 59248254 CTGtttttctttttc i macFas5.chr19 C 0 I 307 s papAnu2.chr19 47323598 15 + 51301725 ctgtttttctttttc i papAnu2.chr19 C 0 I 319 s chlSab2.chr6 47015412 15 + 50890351 CTAtttttctttttc i chlSab2.chr6 C 0 I 453 s mm10.chr7 3823907 15 + 145441459 ttgttttgttttgtt i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=71807.000000 s hg38.chr19_GL949753v2_alt 292459 44 + 796479 -ttttt------------------ttttttttttgagacagagtctcgctctgtcacccaggc s panTro4.chr19 59248859 62 + 63644993 -tttttctttttcttttttcttttttttttttttgagacagagtctcgctctgtcacccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099158 50 + 60714840 -tttgtcttttt------------ttttttttttgagacagagtctctctctgtcacccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102859856 55 - 106955855 -TTTCTTttcttttttt-------ttttttttttgagacagagtctctctctgtcacccaggc i nomLeu3.chr10 C 0 M 957 s macFas5.chr19 55216240 44 + 59248254 -ttttt------------------ttttttttgtgagatggaatctcgctctgtcacccaggt i macFas5.chr19 I 307 C 0 s papAnu2.chr19 47323932 44 + 51301725 -ttttt------------------ttttttttttgagatggaatctcgctctgtcacccaggt i papAnu2.chr19 I 319 C 0 s chlSab2.chr6 47015880 44 + 50890351 -ttttt------------------ttttttttttgagatggaatctcgctctgttacccgggt i chlSab2.chr6 I 453 C 0 s mm10.chr7 3823922 45 + 145441459 ttgttt------------------tgtGtttttcaggactgggtttctctgtctagccctggc i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=134958.000000 s hg38.chr19_GL949753v2_alt 292503 99 + 796479 tggagtgcaatgacacagtctc-------ggctcactgcaacctccgcctcccgggttcgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg s panTro4.chr19 59248921 99 + 63644993 tggagtgcaatgacacagtctc-------ggctcactgcaacctccgcctcccgggttcgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099208 99 + 60714840 cagagtgcaatgacacaatctt-------ggctcactgcaacctccgcctcccgggtttgagcgattctcctgcctcagcctcccaagtagctgggattacaggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55216284 99 + 59248254 tggagtgcaatgacacaatctt-------ggctgactgcaacctctgcctcccagattcaagcgattctcctgcctcagcctcccaaatagctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47323976 99 + 51301725 tggagtgcaatgacacaatctt-------ggctgactgcaacctctgcctcccagattcaagcgattctcctgcctcagcctcccaaatagctgggattacaggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47015924 99 + 50890351 tggagtgcaatgacacaatctt-------gactgactgcaacctctgcctcccagattcaagcaattctcctgcctcagccccccaaatagctgggattacaggtg i chlSab2.chr6 C 0 C 0 s mm10.chr7 3823967 87 + 145441459 ---tgtgctggaactcactctgtagaccaagctggccttgaactc---------------agaaatccaccagcctctgcctcttgagt-gctgggaataaaggtg i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e nomLeu3.chr10 102859911 957 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=34795.000000 s hg38.chr19_GL949753v2_alt 292602 20 + 796479 tgtgccgccacgcccagcta s panTro4.chr19 59249020 20 + 63644993 tgtgccgccacgcccagcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099307 20 + 60714840 tgtgccaccacgcccagcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102860870 20 - 106955855 Tgcgccaccgtgcctggcta i nomLeu3.chr10 M 957 C 0 s macFas5.chr19 55216383 19 + 59248254 tgtaccaccacacccagct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324075 19 + 51301725 tgtaccaccacacccagct- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016023 19 + 50890351 tgtaccaccacacccagct- i chlSab2.chr6 C 0 C 0 s mm10.chr7 3824054 20 + 145441459 tgtgccatcacgcccggctA i mm10.chr7 C 0 I 211 e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=205255.000000 s hg38.chr19_GL949753v2_alt 292622 115 + 796479 atttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacctgcctcggcctcccaaagtgctgagattacacgtg s panTro4.chr19 59249040 115 + 63644993 atttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacccgcctcggcctcccaaagtgctgagattacaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099327 115 + 60714840 atttttgtatttttagtagaaatggggtttcaccatgttggccaggctggtcttgaactcctgacatcaggtgatccacctgcctcggcctcccaaagtgctgagattacaggcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102860890 115 - 106955855 atttttgtatttttagtagaaatggggtttcgccatgttggccagcctggtcttgaactcctgacatcaggtgatccacccgcctcagcctccctaagtgctgagattacaggcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216402 115 + 59248254 atttttatatttttagtagagatggggtttcactgtgttggtcaggctgttcttgaactcttgacatcaggtgatccacccgcctcagcctcccaaagtgctgggattacaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324094 115 + 51301725 atttttatatttttagtagagatggggtttcactgtgttggtcaggctgttcttgaactcctgacatcaggtgatccacccgcctcagccttccaaagtgctgggattacaggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016042 115 + 50890351 atttttatatttttagtagagatagggtttcgccgtgttggccaggcagttcttgaactcctgacatcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggcg i chlSab2.chr6 C 0 C 0 e mm10.chr7 3824074 211 + 145441459 I e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=43803.000000 s hg38.chr19_GL949753v2_alt 292737 28 + 796479 tgagccactgtgccca--gccCTTGCTTTG----- s panTro4.chr19 59249155 28 + 63644993 tgagccactgtgccca--gccCTTGCTTTG----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099442 28 + 60714840 tgagccactgcgcctg--gccCTTGCTCTG----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861005 28 - 106955855 tgagccaccgcgcctg--gccCTTGCTCTG----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216517 28 + 59248254 tgagccaccatgcccg--gccTTTGCTCTG----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324209 28 + 51301725 tgagccaccgcgcccg--gcctttgctCTG----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016157 28 + 50890351 tgagccaccgcgccca--gccTTTGCTCTG----- i chlSab2.chr6 C 0 C 0 s mm10.chr7 3824285 35 + 145441459 TGATCCAGAGTAACCGAAGCCCTCATAAAGCATCA i mm10.chr7 I 211 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e calJac3.chr22 45563805 20 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=235351.000000 s hg38.chr19_GL949753v2_alt 292765 124 + 796479 TTTTCCT------CACCCTGAATTTG--TGTCCCTAGGATTTCTGTGTTC-----TCCTTCCCCTTTTTGTCTTTCTTAGCAGGGGC--------------TGCCCTGCCTGTAAAGC--TCTCCACAACCTGTCTGGCTTCCCTGA-ATTGTA s panTro4.chr19 59249183 124 + 63644993 TTTTTCT------TACCCTGAATTTG--CATCCCTAGGATTTCTGTGTTC-----TCCTTCCCCTTTTTGTCTTTCTTAGCAGGGGC--------------TGCCCTGCCTGTAAAGC--TCTCCACAACCTGTCTGGCTTCCCTGA-ATTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099470 124 + 60714840 TTTTTCT------CAACCTGAATTTG--TGTCCCTAGGATTTCTGTGTTC-----TCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGC--------------TGCCCTGCAGGTAAGGC--TCTCCACAACCTGTCTGGCTTCCCTAA-ATTGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861033 124 - 106955855 TTTTTCT------CACCCTGAATTTG--TGTCCCTAGGATTTCTGTGTTC-----TCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGC--------------TGCCCTGCAGGTAAGGC--TCTCCACAACCTGTCTGGCTTTCCTAA-ATTGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216545 124 + 59248254 TTTTTCT------CACTCTGAACTTG--TATCCCTAGGATTTCTGTATTC-----TCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGC--------------TGCCCTGCAGGTAAGAG--TCTCCACAACCTGCCTGGCTCCCCTAA-ATTGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324237 124 + 51301725 TTTTTCT------CACTCTGAACTTG--TATCCCTAGGATTTCTGtgttc-----tccttcccctttttttctttcttagcgGGGGC--------------TGCCCTGCAGGTAAGAC--TCTCCACAACCTGTCTGGCTCCCCTAA-ATTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016185 124 + 50890351 TTTTTCT------CACTCTGAATTTG--TATCCCTAGGATTTCTGTGTTC-----TCCTTCCCCTTTTTTTCTTTCTTAGCAGGGGC--------------TGCCCTGCAGGTAAGAC--TCTCTACAACCTGTCTGGCTCCCCTAA-ATTGTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563825 117 + 49145316 TTTTCCT------CACTCTATATCTG--TGTCCCCAGGGGCCCG-----------TTTTTCCCTTATCTTTTCTTCTCTAGTGGGTC--------------TAGCCTGAGGGCAAGGC--TGCCAACAGCTCCCCTG--TACCCTGACGTTGTA i calJac3.chr22 I 20 T 19656 s mm10.chr7 3824320 151 + 145441459 TCTCCCTAATGGGCACTCTGGGCTTGGCTGTCACTGTGAGTCTTGGAATCACTGTTTCCTGTGCTCTGTGTCAACGTTCAAAAGAGCCCTGGATCCCCACATACACCGCACATCAAGTGGTCTCTGAAACCTGTATGATTTCAATATCATT--- i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=7595.000000 s hg38.chr19_GL949753v2_alt 292889 3 + 796479 CTA s panTro4.chr19 59249307 3 + 63644993 CTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099594 3 + 60714840 CTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861157 3 - 106955855 CTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216669 3 + 59248254 CAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324361 3 + 51301725 CTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016309 3 + 50890351 CTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544286 3 + 49145316 CCA i calJac3.chr22 T 19656 C 0 s mm10.chr7 3824471 3 + 145441459 CTA i mm10.chr7 C 0 C 0 e canFam3.chr1 19731580 1650 - 122678785 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=3864787.000000 s hg38.chr19_GL949753v2_alt 292892 1463 + 796479 GAGAAGACTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCATACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGG--GTCA-GCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACTGGAGGGTCACGTTCTCTCCTGAGGTCACCACAGGACTGGGCAGGGCTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAA-------------AGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGA-GGGCAGAGCCTGGAGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGTAGTAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTC----TGGGCTTCCCTCTTTAACCAGACGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCGGATGGTCACAGAGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGCTTTGGAGAGGTTCCCTGGAAGGAAATCAGAGTCTGGGCTCCAAGACCT-----CCCC-ACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGACGT-CCCCATCAATCA-CCCAGAACTGCGGTCTTCACCCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCATTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCTGAAGCCTGAGCAGGTCCTCCCCTGCCTGGGAACCTCCTAAAACCCTGGAGTTTCCTGATAGACAAGGGCCTCGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGAACCATGAGGGCAGGGCTCACGGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACACAGGGTGTGGCAGCTCGGAGGCTGGGTCCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACTGCTC-TCCCCA--GGAGCCTGGCTCTCATTTCCCCAGGGCTGAAGTGAAGTAGTTGAGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAGTGGGGTC-TCCCTT-CCCCGGGCCACTGTCTGCCTGATTTAT s panTro4.chr19 59249310 1463 + 63644993 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCATACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGG--GTCA-GCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTTGAATCTCAGCCATGAGCCACACTGGAGGGTCATGTTCTCTCCTGAGGTCACCACAGGGCTGGGCAGGGTTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCACA-CCTCCCGCGTCAT-CCCCAGGGCTGGGCTGTGAA-------------AGGGAGACACCCCTGAGAGCCGACCCCCTTCCTGA-GGGCAGAGCCTGGGGCTGGGACCCCAGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGCGATAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTC----TGGGCTTCCCTCTTTATCTAGACGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCGGATGGTCACAGGGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGAGAGGTTCCCTGGAAGGAAATCAGAGTCTGGGCTCCAAGACCT-----CCCC-ACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGATGT-CCCCATCAATCA-CCCAGAACTGCAATCTCCACCCCCAGCTGTCC-ATGGGTGGCCCTTTGTTCCCATTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCTGAAGCCTGAGCAGGTCCTCTCTTGCCTGGGAACCTCCTAAAACCCTGGAGTTTCCTGATAGACAAGGGCCTCGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGAGCCATGAGGGCAGGGCTCACGGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACACAGGGTGTGGCAGCTCGGAGGCTGGGTCCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACTGCTC-TCCCCA--GGAGCCTGGCTCTCATTTCCCCAGGGCTGAAGTGAAGTAGTTGAGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAGTGGGGTC-TCCCTT-CCCCGGGCCACTGTCTGCTTGATTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56099597 1463 + 60714840 GAGAAGGCTGTGGCTTCCTCACCTGACACCAGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTGACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGG--GTCA-GCTGTGAGTCCAGGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACTGGAGGGTCACATTCTCTCCTGAGGTCACCACAGGGCTGGGCACGGCTGAGAGGGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGATGCACCGTGTTAAATGGGGCTCACA-CCTCCCACATCAT-CCCCACGGCTGGGCTGTGAG-------------AGGGAGACGCCCCTGAGAGCCGACCCCCTTCCCGA-GGGCAGAGCCTGGGGCTGGGACCCTGGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGACATAGTAACAGCGGTATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTTGTTCTTGGGCTCCAGTGGGTTCTGTGTGTCCCAGGGTTC----TGGGCTTCCCTCTTTATCCAGATGGTATTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACAGAGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGATGGGTTTGGAGAGGTTCCCTGGATGGAAATCAGAGTCTGGGCTCTAAGACCT-----CCCC-ACCCCTCAGATCCCAGCTCTCAGCCCCAGGACCCTCCAGACAT-CCCCATCAGTCA-CCCAGAACTGCGGTCTCCACTCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCCTCTGAAGCCTGGGCAGGCCTTCCCCTGCCTGGGAACCTCCTAACACCCTGGAGTTTCCTGATAGATGAGGGCCTGGTTATGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTGAGGCTTCCAATCTCACCGAGGCAGAGCAGCGCCATGAGGGCAGGGCTCACGGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGAGACACAGAGAGTGTGGCCGCTCGGAGGCTGGGTTCTTCTTGTCATAGGATTTTCTCATTCTCAGCC-CACAGAAAGGGGAACGGCCC-TCCCCA--GGAGCCTGGCTCTCATTTCCTCAGGGCTGAAGTGAAGTAGCTGGGACTACAGGCACCAGGCTCTCTGCAGACATTTCAGACAGAAATGGGGTC-TCCCTTCCCCCGGGCCACTGTC-GCCTGATTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102861160 1464 - 106955855 GAGAAGGCTGTGGCTTCCTCACCTGAGATCAGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGCGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGG--GTCA-GCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTTTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACTGGAGGGTCACGTTCTCTCCTGAGGTGACCACAGGGCTGGGCACGGCTGAGAGGGTGGGTTTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCATGTTAAATGGGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAG-------------AGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGGCAGAGCCTGGGGCTGGGACCCTGGAGTGTCCTCTCACCTGTCACCACGAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTGTGATAGTAACAGCGGTATCTCCCTGCCTGGTGCTCTGTCATGGA--TGGGATGGACAAGTTGGCCCTGTTCCTGGGTTCCAGTGGGTTCTGTGTGTCCCAGGATGC----TGGGCTTCCCTCTTTATACAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACAGGGTTCCCCCGGCTGATCACAGAGCCTGGCTCAGCCCAGAGGGTGGGTTTGGAGAGATTTCCTGGAAGGAAATCAGAGGCTGGGCTCCAAGACCT-----CCCC-ACCCCTCAGATCCCAGCTCTCAGCCCCAGGGCCCTCCAGACGT-CCCCATCAGTCA-CCCAGAACTGCGGTCTCCACCCCTAGCTGCTC-ATGGGTTGCCCTTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTGTGAGGGATTTGCCCCTGAAGCCTGAGCAGGCCCTCCCCTGCCTGGGAACCTCCTAACACCCTGGGGTTTCCTGATAGACAAGGGCCTGGTTACGGGGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCTAAGGCTTCCAATCTCACCCAGGCAGAGCAGAACCATGAGGGCAGGGCTCACGGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGGGCCTGGCAGGTCAGAGAGACACACAGGGTGTGGCCGCTTGGAGGCTGGGTCCTTCTTGTCATGGGGTTGTCTCATTCTCAGCC-CACAGGAAGGGGAGCTGCCC-TCCCCG--GGAGCCTGACTCTCATTTCCCTAGGGCTGAAGTGAAGTAGCTGGGACTACAGGCACCACGCTTTCTGCAGACATTTCAGACAGAAATGGAGTC-TCCCTTCCCCTGGGCCACTGTCTGCCTGATTTAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55216672 1451 + 59248254 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGTAGGATATGCCTGCG--AGAGCCATAGCATCTGAACGTCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAAGA--GACA-GCTGTGAGTTCGAGGTCCAGGAGAGATTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTTAGCCGTGAGCCACACAGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGACTGAGAGGGTGGGTTTGCTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTTAAT-GGGCTCCCA-CCTCCCACATCATCCCCCAGGGCTGGGCTGTGAG-------------AGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGACAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGCCTTCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGGGTTCTGTGTGTTCCAGGGCGC----TGTGCTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGATGATCACAGAGCCTGGCTCAACCCAGAGGGCGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGT-----CCCTCAGCCCTCAGATCCCAGCTCCCAGTCCCAGGACCCTTCAGATGT-CGCCATCAGTCA-CCCAGAACTGCTGTCTCCTCCCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCT--GGGACAGCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAGTTCCCTATGAGGGATTTGCCCCTGAAGCCTGAGCAGACCCTCCCCGCCCTGGGAACCTGCTAACACCCTGGAGTTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCATCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAGACCATGGTGCCTGGCAGGACAGAGACACACACAGGGTGTGGCCGCTCGGAGGCTGGGTCCTTCTTGTCATAGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACCGCCC-TCCCCC--CGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGG-----------GCGGGCATCAAGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCCGTCCCCGGGCCACTGTCTGCCTGATTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47324364 1450 + 51301725 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTCCAGGAGGTCACTGGGTTCTGACCACACCTGTAGGATATGCCTGCG--AGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAAGA--GACA-GCTGTGAGTTCGAGGTCCAGGAGAGACTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTTAGCTGTGAGCCACACAGGAGGGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGACTGAGAGCGTGGGTTTGTTGTAGAATCCTAGGAGAGAAGGAGGCACCGTGTTTAAT-GGGCTCCCA-CCTCCCACATCAT-CCCCAGGGCTGGGCTGTGAG-------------AGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGACAGAGCCTGCGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTTCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGGA--TGGGATGGAGAATCTGGCCTtgttcctgggctccagtgggTTCTGTGTGTTCCAGGGCGC----TGGGCTTCCCTCTTTATGCAGACGGtactcctgggcctccagggtCCCCTGACACCAGATGGTCACGGGGTTCCCCCGGATGATCACAGAGCCAGGCTCAGCCCAGAGGGTGGGTTTGGGGAGGGGCCCTGGAAGGAAATCAGAGGCTGCATCCCAAGACGT-----CCCTCAGCCCTCAGATCCCAGCTCCCAGTCCCAGGACCCTTCAGATGT-CGCCATCAGTCA-CCCAGAACTGCTGTCTCCTCTCCCAGCTGCCC-ATGGGTGGCCTTTTGTCCCCACTGAGGAGGAGGGACCT--AGGACAGCTGGGGACAGACTCACCTGCCTGCACACAGGTCCTGGGGCCCAGACTCAGCCCTGGAAGAGAATTCCCTGTGAGGGATTTGCCCCTGAAGCCTGAGCAGACCCTCCCCGCCCTGGGAACCTGCTAACACCCTGGAGTTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGATACCATGGTGCCTGGCAGGACAGAGACATACACAGGGTGTGGCTGCTCGGAGCCTGGGTCCTTCTTGTCATAGGGTTGTCTCATCCTCAGCC-CACAGGAAGGGGAACCGCCC-TCGCCT--GGAGCCTGGCTCTCATTTCCccagggctgaggtgggg-----------gcggGCATCAGGCTCTCTGCAGACATTTCAGAGAGATATGGGGTC-TCCCCGTCCCCGGGCCACTGTCTGCCTGATTTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47016312 1448 + 50890351 GAGAAGGCTGTGGCTTCCTCACCTGAGACCGGAATCTGCAGGAGGTCACTGGGTTCTGACCACACCTGCAGGATATGCCTGCG--AGAGCCATAGTATCTGAGCATCCACCTGTGGCTGGGGGTCACGGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTAGGA--GACA-GCTGTGAGTTCGAGGTCCAGGAGAGATTGTGATCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACAGGAGAGTCACGTTCCCTCCTGAGGCCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTGCTGTAGGCTCCTAGGAGAGAAGGAGGCACCGTGTTTAAT-GGGCTCCCA-CCTCCCGCATCAT-CCCCAGGGCTGGGCTGTGAG-------------AGGGAGACGCCCCTGAGAGCCGACCCCCTTCCTGA-GGGCAGAGCCGGGGGCTGGGACCCCTGAGTGTCCTCTCACCTGTCACCACCAGCTCCAGGGGGTCACTGTGCTCTGACCAGCCTGCAGGGCTGAGATAGTAACAGCGAAATCTCCCTGCATGGTGCTCTGTCATGAA--TGGGATGGAGAATCTGGCCTTGTTCCTGGGCTCCAGTGGGTTCTGTGTGTTCCAGGGCTC----TGGGATTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTCCCCCGACACCAGATGGTCACGGGGCTCCCCCGGATGATCACAGAGCCTGGCTCAGCCCAGAGGGCGGGTTTGTGGAGGGGCCCTGGAAGGAAATCAGAGGCTGGATCCCAAGATGT-----CCCC--ACACTCAGATCCCAGCTCCCAGCCCCAGGACCCTTCAGATGT-CACCATCAGTCA-CCCAGAACTGCTGTCTCCTCTCCCAGCTGCCC-ATGGGTGGCCCTTTGTCCCCAGTGAGGAGGAGGGACCT--AGGACAGCTGGGGACAGACTCACCTGCCTGCACGTGGGTCCTGGGGCCCAGACTCAGACCTGGAAGAGAGTTCCCTATGAGGGATTTGCCCCT-AAACCTGAGCAGACCCTCCCCGCCCTGGGAACATGCTAACACCCTGGAGCTTCCTGATAGACAAGGCCCTGGTTATGGAGTGGGGTCCCTCCCAGACTAGGGTGCCCCTTCCCT---GCTTCCAATCTCACCGAGGCAGAGCAGAGCCACGAGGGCAGGGGTCACAGCGTCTCCTCCCACTGGCTGCAGCTGTGCAGATGGATGAACCCTCGGTG-CTGGCAGGACAGACACACACACAGGGTGTGGCTGCTCGGAGGCTGGGTCCTTCTTGTCATGGGATTGTCTCATCCTCAGCC-CACAGGAAGGGGAACTGCCC-TCCCCCCGGGAGCCTGGCTCTCATTTCCCCAGGGCTGAGGTGGGG-----------GCGGGCACCAGGCTCTCTGCAGACATTTCAGAGAGAAATGGGGTC-TCCCCGTCCCTGGGCCACTGTCTGCCTGATTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544289 1441 + 49145316 GACAATACTATGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACAT--AGGGAAAGCTTGAGTCATAACCATAGCACCTGTACGTCCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCAGGGGTA--CGGG-GCTGGGAGC------TGCATGGTGGGTGTTCATCTTCTTCCTTACACAGAATGAAGCCATGAAATGGCAACTCTGAGCCACACTGGAGGGTCACGCTTCTTCCTGGGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTCCTGTAGACTCCTAGGAGAAAAGGAGGCCCCGTGTTAAGTGGGGCTCACA-CCTCCCACATCAT--CCCAGGGCTGGGCTGTGAG-------------AGGGAGATGCCCCTGAGTGCAGAGCCCCTTCCTGA-GGGCAGATCCTGGGGCTGGGACCCCTGAGTG-ACTCTCACCTGTCACCACCAGCTCCAGGGGATCACTGGGCTTGGACCAGCCAGAGTGGCTGTAATACTGACAGCGATACTGCCCTGCGTGTTGCCAGGCGATGGA--CTGGATGGGGAACTGGCCCTTCTTCACAAGCTCCCGTGGGATCCATGTAATCCAGGATGC----TGATGCTTTTTCTTTATATAGATGATACTCCTGGGCTTCCTGGTCCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGTGACCACAGAGCTTGGCTCAGCCCAGAGGGTGGGTGTGGGGAGGGTCCCTGGCAGGAAATCAGAGGTCAGATTCTAAGTCATTTACACCCA-ACCCAACAGATTCCAGCTCTCAGT-CAAGGACCCTCCAGAC---CCCCATCAGTCAGCCCAGAACTGCTGTTCCCCTCCCCAGCTGCAC-GGGGTGGGCC--TTGTCCCCAGTGAGGAGGA-AGACCT--GGGCCAGCTGGGGACGGACTCACCTGCCTGCATGTGGGTCCTGGGGCCCAGACTTAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCTGAAGCCTGAGCAGCTCCTTCCCTCCCTGGGGTCTTTGTGAGCCCCTGGGGTCTCCTTATGGACCAG--TTTGGCTGTGGGGTGAGGTCCCTCCTAGGTTAGAATCTCCCCTCCCT----CTTCAAATCTCACCGAGACAGATCAGGACCATGAGGATGGGGGTCATGGCGTCTCCTCCCACTGCC--CTGCTCTGCGGATGGATGAGCCCTCGGTG-CTGGCAGGACAGAGAGACAC--AGGGTGTGGACACTTGGTGCCTTGGTTGTTCTTGTCATGGGGTTGTGTCATCTGCAGCCACACAGGAAGCAGAACTGCCC-TCCACA--GGAGCCTGGCTCTCATTCCTTTAGGTTTGAGGTAGGG--GTGGGG---GTGGGT-CCAACCCCTCTGCAGACATTTCAGACTGTAATGGGGTCTTTCCTGACCCCCAGCCACTGTCTGTCTGCTTTGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3824474 1434 + 145441459 TGGAAGGCTGAGGC-TCCTCACCTGAGACCAGGAGCTCCACGGATTCACTTGGAGGTGACCACACATATGGTCTGTTCCTGTC--ATAACTGTAACATCTGCATATCCATCTCTGGTTGGGGGTCACAGGGCCCACAGAGAACAGGGCGTGGTACTTCCTTGTAGAGTAGTTATACTGTGAGTCTTGTCTCCATATGAGATTCTGTGGTCCTTCTACAGTCAAAATGAACCTGTGATAGCTCTGCGAGGACTCACACTGGAGGGTGACATACCCTCCTGAAGTTACCACTGGGCTGGCCTGGGCTGAAAGGCTGGGTGTCCAGTAGTCTTCTAGGAGAGAAGGAGGAGTCA-GTTAAAT-GTCCGCAGG-CCT----CATTAT-TCTC----CTTGGCTCTGAGGTTCCCACAGTGAGGGTGGGCATTCCTGTTAACAGAGCCAAGTCTGGACATTTATAACCTGAGGCCTAGGATCCTGTGTGT-CTCTCACCTGTCACCACCAGCTCCAGGAGGTCACTGTAGCCTGATGATTTATACTGGGTGCTGTAGGAACATTCATATTGACCTGCAT--TACTCAGGTCTACATTTGAGAATGAGAATTCAGCCTTGTTTGCTGGCTTCTGTTTGTTCTTTGT----TACGGTTTTATATAGCTTTCCATCTTTATAGAGGCGGTACTCATTGGCTCCAATTGTCTCTTCACACAAGAAGGTCACCTTAGTCCACCTGGAGACCACAGAGTCTGGCTGTACTCTGAGGATAGGCTTAGGGAGGGACCCTGCAAGTAACAGAGCAACTAGGACTCAGGACAA-----ACAC-A---CTCAGATTGCAGTCCTTAACCCCATGACCTTCCCGCCAC-CCACAGGACTGA-CACACAGGAGGTGTTTTCCACCATCACAGCCC-AGGCATGGCTCCTGGATC----TGAAGAAAAGAGCATTTCAGTTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGAGGCTCAGAGTGAGTCCTGGAAGAGAGTTCTTTGTAAGAGATTTGTCCCT-AAGGGTGGGCAAGTCTGC---------AGAAACATCTGAGACCCTGGGGTTTCCTTTTGGGTGCGTGCTGGTCTACAGGCCATGATCATTTCCAGACCTCAGTATCCCCTCCCC--CTCTTCACATCTCACCAAGACAGAGCCGGGCTGTGAAGGTGCAGGACATGGCATCTCCCCTCAGTGGCTGCAACTGTGCTCAAGGGCAGAGCTACAGAGCCTTTCTGAAGGGATTG-TGTACAGGGTGTGGCA--CTGGAGGCAGGGCAGTCCCCATGACATGGTCATAT-ATCAGCAACCCCACAGAAAGAGGAACTGCCC-TCCTCA--GCACCATG-CTCTGACTTCCTCAATGGTGTGACTAGG-----------CCAGGCAGTAGACCCTCTGCCATTAGTTCTTACACAGATGGCGTT-TCCTCATCCC---ACCAGTGTCTGCCTCACCTGT i mm10.chr7 C 0 T 29542 s canFam3.chr1 19733230 1306 - 122678785 GAGAGGGTTGGG--CTTCTCACCTGAGTCCAACAGCTCCAGGGGGTCACTGGAGAATGACCACACTTGGAGGGTGTTGCTGTA--ATAACCATAGCATCTGAATGACCACTTGAGGCTGGGGTCCACGGGGCCCACAGGGAACAGGCCCTGGAACACCTCACTGGGG--GCTC-GCTGGGAGTCCTGAGTCCAGGACGGTTGGCCTTCTCCTTCCTTCATCAGGACAAACCTGTGGAATCCTGTCTGTAAACCACACTGGAGGGTCACATTCCCTCCTGAGGGCACGACAGGGCTGGGTAGGGCTGAGAGGTTGGGTTTGCCATGGAATCCTAGGAGAG-GGGAGGGGCTGTGTTAAATGGGGCTCAGATCCCCCCACATGAT-CCCCAGGACTCGGCTGTGAG-------------ACGGCAACACT-CTAAGAGCAGATCTTCTTCCTGA-------------GGTCTGGGACCC-TAAGTGGACTCTCACCTGTCACCACCAGCTCTAAGGGGTCACTGTAATGTGACTGGTCAGTGGCCCTTCTATAGTAGCAGCAATATCGTCCTGCATATTGCT--GTCATGTA--CATGATGGAGAACTTGGCCTTGTCCTTGGGTTCCAGTGCAGGCTGTCTCTCCCAAGGCCA----TAACTTTCCCTCTTTATGCAGGAGGTACTCCTGGGCCTTCAGGCTCCCCTGACACCAGATGGTCACAGGTGTCCCCCAGGGGATCACAGAACCTGGCTCAGTCCAGATGGTGGGTTTGGGGAGGATCCCTGGAAGGAAACAAGAGACTGGGTCACAAGATCC-----TCCC-CACACCCAATTCCCAACTC--AGCCCCA--AACCCCCAGGTATCCCCCCTCTGTCAGCCCAGAGATGCTGATCTCCATGCCTCCTGCCTGGTTGGTGGTTC-CTGTTCCCAGTGAGGAGGTGGGAA-T--GGGACCCCTGGGGACAGACTCACCTGCTTGTACTCGGGTCCTGGAGCTCACACTCAGCCCTGGAAGAGA-------------GGTTTGCC-CTGAGTTCTGAGCAGA---ATCCCTTCTCATAAGCCTCCTGAG--CCTGGGATCT-TTGACAGACAAGGACCTGGCTGTGGGGTG-GGTCCCTCCCAGACTAGGGGGTTCCCTCCTC---TCCTCAGATCTCACCTAGACAGAGCATGGCCATCATGGTTAGGGTCATGGTGTCTTCTCTCTCTGGTT-CAGCTGTGCAGATGGA-GGAACCTCAGTGCCC-ACAGGACAGACAGACACACAGGGTGTGTCCCCTTGGGGACC-AGTCTTCCTCATCATGGGGTTGTCACGTCAGCAACCATACAAGAAGGAAAACACCTTGTTCTCC--GGGGCCTAGCCTGGGT---------------------------------------------------------------------------------------------------------------- i canFam3.chr1 I 1650 C 0 e rheMac3.chr19 60136917 1220 + 64156825 T a score=321127.000000 s hg38.chr19_GL949753v2_alt 294355 148 + 796479 CTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCGT s panTro4.chr19 59250773 148 + 63644993 CTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGTGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCCCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101060 148 + 60714840 CTTTATCTCACTGAGAGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTTTCAGGCGAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATGAGCTCAGCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102862624 149 - 106955855 CGTTATCTCACTGAGAGCCGGGACACAGTTTTCAAATAGACCTGGTGCCTTCCTGAGTCAGCTCCTTTCAGGCAAGGGTGA----------CCTCCTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCCCCTTCAGCCCGTCCATCAGCTCAACAT i nomLeu3.chr10 C 0 M 1270 s macFas5.chr19 55218123 152 + 59248254 CTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCGGTGCCTTCCTGAGTCAGCCCCTT-----AGAGGGAGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCCTTCAGCCCGTCCATCGGCTCAGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47325814 157 + 51301725 CTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCGGTGACTTCCTCAGTCAGCCCCTTTCAGGCGAGGACGA-CCGTGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGgggtctccctccctccttcagccCGTCCATCGGCTCAGCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017760 157 + 50890351 CTTTATCTCACTGAGGGCCGGGACACAG-CAGCAAATAGACCCAGTGACTTCCTCAGTCAGCCCCTTTCAGGCGAGGACGA-CCATGGGCTCCTCTTCCCTCTCAGAGCCTCC-CCATGGGGTCTCCCTCCCTCTTTCAGCCCGTCCATCGGCTCAGCGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545730 156 + 49145316 CCTCATCTCACTGAGAGCCGGGATATAG-CAGCAAATAGAACTGGTGCCTTCCTGTATCTGC-CCTTCCAGATGAGGGTAAGCTAAGGATTCCTGTTCCTTCTCACAGCCT-C-CCATGAGGTCTCCCTCCCTCCTTCAGCCTGTCCATCAGCACAGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19734536 123 - 122678785 ----------CTGAGGTCCATGATGGTG-CAGCAAGTGGACTCTGACATGTCCTG-----------TCCATGTGAGGA-GA-CCTGCATATGTTCTTTCCTCCCAGAATCTCCTCCATAGGGTATCCTTCAACC--TCAGCATATCCCT----------- i canFam3.chr1 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e rheMac3.chr19 60136917 1220 + 64156825 T a score=401269.000000 s hg38.chr19_GL949753v2_alt 294503 234 + 796479 TGCGGGGTCCTTACCATGGTCAGTGATTTTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCCACA----GGCAGACTCAGATCAGCAGAGACACATCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCATGTGGCAATGAGCACAGAGGAGAAAT-GCAGGGAAATAGGGGAGGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTTCTTTCTAACCAATAGTACTC-- s panTro4.chr19 59250921 234 + 63644993 TGCGGGGTCCTTACCATGGTCAGTGATTTTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCCGCA----GGCAGACTCAGATCAGCAGAGACACGCCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCATGTGGCAACGAGCACACAGGAGAAAT-GCAGGGAGATAGGGGAGGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTTCTTTCTAACCAATAGTACTC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101208 234 + 60714840 TGCGGGGTCCTTACCATGGTCAGTGATTCTTCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA----GGCAGACTCAGATCAGCAGAGACGCACCTGACACCTGGCTGTGTAGCCCAGGCTGAGCTGCGTGTGGCAATGAGCACAGAGGAGTGAT-GCAGGGAAATAGGGGAGGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTTCTTTCTAACCAATAGTACTC-- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218275 234 + 59248254 CGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA----GGCAGACCCAGGTCAGCAGAGACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAGTGAGAACACAGGAGAAAT-GCAGGGAAATAGGGGAAGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTCTTTTCTAACCAATAGTACTC-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47325971 234 + 51301725 CGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA----GGCAGACTCAGGTCAGCAGAGACGCACCTGACACCGCGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAATGAGCACAGAAGAGAAAT-GCACGGAAATAGGGGAAGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTCTTCTCTAACCAATAgtactc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47017917 235 + 50890351 CGCGGGGTCCTTACCATGGCAGTCGTCTCTCCAGCCCTGGAGATGCTTCAGGGAAGATGCAGGTCCATGCTGCA----GGCAGACCCAGGTCAGCAGAAACGCACCTGACACCGGGCTGTGCAGCCCAGGCTGAGCTGTGAGTGGCAATGAGCACAGAAGAGAAATGGCAGGGAAATAGGGGAAGAAATCATGAC-CCTTTAGTGGCCCTGGA----GTGT----TTCTTTTCTAACCAATAGTACTC-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545886 239 + 49145316 TGTGGGGTTCTTACTTAGGCAGTTGTCTCTTCAGCCCTGGACATGCTTCAGGGAAGATGCAGGTCCATGCTCCA----GGCAGGCTCAGATCAGCAGAGACGCATCTCACATCTGTCTGTGTAGTCCAGGCAGAGCTGTGTGTGGCCGTGGGCACAGAACAGAAAT-GCAGGGAAACAGGGGAAGGAAAGTTGACTTCTTTCTTGGCACTGGATTTTGGGT----TTTCTTTCAACCAAATAGTTCCC-- i calJac3.chr22 C 0 I 4772 s canFam3.chr1 19734659 224 - 122678785 ---GGGGTCCTCACCATGGACGGGG--TCCCCTGCCCCAGAGATGCTGCA--GAAGACATGGGTTCCTGCTGTGCTGTGGC--GCTCATGTCAGCACAGACACATTTGTGACATCTCTGCTT-GTTCAGGTCAAGGTCACTGTGGCAAAAAGCCTAGAAGAGAAAT---------ATAGGAAAGGAAACACATCC-TCTCTCCTGGCCCCAGA----GCATGGTATTTCTTTCTATC--ACAGCTTGCAT i canFam3.chr1 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=-1395.000000 s hg38.chr19_GL949753v2_alt 294737 1 + 796479 -T s panTro4.chr19 59251155 1 + 63644993 -T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101442 1 + 60714840 -T i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218509 1 + 59248254 -t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326205 1 + 51301725 -t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018152 1 + 50890351 -t i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19734883 1 - 122678785 G- i canFam3.chr1 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e calJac3.chr22 45546125 4772 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=20945.000000 s hg38.chr19_GL949753v2_alt 294738 27 + 796479 ----------CTTTCTTGTACTTCCCTTAAttttttt s panTro4.chr19 59251156 26 + 63644993 ----------CTTTCTTGTACTTCCCTTAA-tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101443 22 + 60714840 ----------CTTTCTTGTACTTCCCttaa-----tt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218510 22 + 59248254 ----------ttttcttttacttctcttaa-----tt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326206 22 + 51301725 ----------ttttcttttacttctcttaa-----tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018153 22 + 50890351 ----------ttttcttttacttctcttaa-----tt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550897 20 + 49145316 ----------CCTTCACGAACTTCTCCTTA------- i calJac3.chr22 I 4772 C 0 s canFam3.chr1 19734884 27 - 122678785 GACTTCTTTATTTTCCTGGACTTTTCT---------- i canFam3.chr1 C 0 I 11993 e mm10.chr7 3825908 29542 + 145441459 T e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=45658.000000 s hg38.chr19_GL949753v2_alt 294765 39 + 796479 ttttttttt--tttttttGCAACAGCGTCCACCTCCACCCC s panTro4.chr19 59251182 39 + 63644993 ttttttttt--tttttttGCAACAGCGTCCACCTCCATCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101465 39 + 60714840 ttttttttt--tttttttGCAACAGTGTCCACCTCCACTCC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218532 40 + 59248254 ttttttttgt-tttttttGCAACAGAGTCTACTTCCACCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326228 41 + 51301725 ttttttttttgtttttttgcaacagagtctACTTCCACCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018175 39 + 50890351 ttttttttg--ttttcttGCAACAGAGTCTACTTCCACCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45550917 29 + 49145316 ------------GTCGTCACCACAGCCTCCACCTCCATCTC i calJac3.chr22 C 0 I 157 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19734911 11993 - 122678785 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=65451.000000 s hg38.chr19_GL949753v2_alt 294804 51 + 796479 ACCTCCAGTAACAAACCTCTGAATCTTTTCTGCCTCCACTGTGCCTTCTGT s panTro4.chr19 59251221 51 + 63644993 ACCTCCAGTAACAAACCTCTGAATCGTTTCTGCCTCCACTGTGCCTTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101504 51 + 60714840 ACCTCCAGTAACAAACCTCTGAATCGTTTCTGCCTCCACTGTGCCTTCTGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218572 50 + 59248254 ACCTCC-GGAACAAACCTCTGAATCATTTCTGCCTCCACTGTGCCTTTTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326269 51 + 51301725 ACCTCCAGGAACAAACCTCTGAATCATTTCTGCCTCCACtgtgccttttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018214 51 + 50890351 ACCTCCAGGAACAAACCTCTGAATCATTTCTGCCTCCACTGTGCCTTTTGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19734911 11993 - 122678785 I e calJac3.chr22 45550946 157 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=134309.000000 s hg38.chr19_GL949753v2_alt 294855 105 + 796479 TTCTTTGGGC-------TTCCCTCTATACCTC-----AATCCATGTTCAACATTTTCGGAGTAATTACTTAG------GCTTTGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA s panTro4.chr19 59251272 105 + 63644993 TTCTTTGGGC-------TTCCCTCTATACCTC-----AATCCATGTTCAACATTTTCGGAGTAATTACTTAG------GCTTTGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101555 105 + 60714840 TTCTTTGGGC-------TTCCCTCTACACCTC-----AATCCGTGTTCAACATTTTCAGAGTAATTACTTAG------GCTTTGTTTT----AAAATTTTCATTC-TTATGTATCTATTTATTTTTTA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218622 105 + 59248254 TTCTTTGGGT-------TTCCCTCCACACCTC-----AATCCAAGTTCAACATTTTCAGAGTAATTACTTAG------GCTTTGTTTT----GAAatttttattc-ttatgtatctatttatttttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326320 101 + 51301725 ttctttgggT-------TTCCCTCTACACCTC-----AATCCAAGTTCAACATTTTCAGAGTAATTACTTAG------gctttgtttt----gaaatgtttattc-ttatgtatc----tatttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018265 105 + 50890351 TTCTTTGGGT-------TTCCCTCTACACCTC-----AATCCAAGTTCAACATTTTCAGAGTAATTACTTAG------GCTTTGTTTT----GAAatttttattc-ttatgtatctatttatttttta i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19746904 127 - 122678785 -TCCTGGGGCAGAGCCATCCTCTCCATCCATCCTGGGGTCCTGTCTGTAAGCTGTATGGAGCACATATTTGGTTTAGAGCTCTGATTTTGAAGAAAAACTTATCCTTTATCTAAATATTCATCTATTA i canFam3.chr1 I 11993 T 16212 e mm10.chr7 3825908 29542 + 145441459 T e calJac3.chr22 45550946 157 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=64654.000000 s hg38.chr19_GL949753v2_alt 294960 51 + 796479 ATTTTTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCTGAGTGGGGA s panTro4.chr19 59251377 51 + 63644993 ATTTTTGTGGGTACATTACTTACGTTTGGGCTCTGGTTTGCTGAGTAGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101660 51 + 60714840 ATTTTTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCTGAGTGGGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218727 51 + 59248254 attttTGTGGGTACATTACTTAGATTTGGGCTCTGGTTTGCGGAGAGGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326421 51 + 51301725 atttttgtgggtacattaCTTAGGTTTGGGCTCTGGTTTGCGGAGAGGCGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018370 51 + 50890351 attttTGTGGGTACATTACTTAGGTTTGGGCTCTGGTTTGCGGAGAGGTGA i chlSab2.chr6 C 0 I 15 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45550946 157 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=2619.000000 s hg38.chr19_GL949753v2_alt 295011 13 + 796479 GTTGATTTCTTTC- s panTro4.chr19 59251428 13 + 63644993 GTTGAtttctttc- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101711 13 + 60714840 GTTGATTTCTTCC- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218778 11 + 59248254 ---CAACTCTCTCA i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47326472 11 + 51301725 ---CAACTCTCtca i papAnu2.chr19 C 0 I 4 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45550946 157 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e chlSab2.chr6 47018421 15 + 50890351 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=47664.000000 s hg38.chr19_GL949753v2_alt 295024 55 + 796479 Tttctttctttc---tttccttttttttttttttgagaccgagtctcgctctgtcgcc s panTro4.chr19 59251441 53 + 63644993 tttctttctttc---tttc--tttttgtttttttgagaccgagtctcgctctgtcgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101724 49 + 60714840 tttttttttttt---------tttttttttttttgagacagagtctcactctgttgcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55218793 53 + 59248254 tttctttctttc---tttt--tttttttttttctgagatggaatcttgacctgtcacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47326487 51 + 51301725 tttctttctttc-----tt--tttttttttttctgagatggaatcttgacctgtcacc i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47018436 56 + 50890351 TTTCtttctttcttttttt--tttttttttttctgagatggaatcttgacctatcacc i chlSab2.chr6 I 15 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45550946 157 + 49145316 I e nomLeu3.chr10 102862773 1270 - 106955855 M e rheMac3.chr19 60136917 1220 + 64156825 T a score=506983.000000 s hg38.chr19_GL949753v2_alt 295079 290 + 796479 caggctggagtgcaatggcgctatctcggctcactgcaagctccacctcccgggttcataccattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcctacctcggcctcccaaagtgctgggattacaggcgtgagccactgcg-cccggcTGGTggggagttgatttctatgtaattcccgat s panTro4.chr19 59251494 291 + 63644993 caggctggagtgcaatggcgctatctcggctcactgcaagctccgcctcccgggttcataccattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccgcctatctcggcctcccaaagtgctgggattacaggcgtgagccactgcgccccggccAGTGGGGAGTTGATTTCTATGTAATTCCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56101773 290 + 60714840 caggctggagtgcagtggcgcaatcttggctcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcatccgccaccatgcctggctaatttttttgtatttttattagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccacccgcgtcagcctcccaaagtgctgggattacaggcgtgagccaccgca-cccggccAGTGGGGAGGTGATTTCTATGTCATtcctgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864044 289 - 106955855 caggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccaggttcacgccattctcctg-ctcagcctcccgagcagctgggactacaggcatccgccaccacgcccggctattttttttgtacttttattagagacagggtttcaccatgttagccaggatggtcttgatctcttgaccttatgatacactcgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcg-cccggccAGTGGGGAGTTGATTTCTATGTAATtcctgat i nomLeu3.chr10 M 1270 C 0 s macFas5.chr19 55218846 290 + 59248254 caggctagagtgcagtggcacaatcttggcacactgcaagctccacctcccgggttcacgccattctcctacctcagcttcccgagcagctgggactacaggtgcccaccaccacgcccggctactttttttgtatttttattagagacggggtttcaccgtgttagctaggatggtcttgatctcctgacctcatgatccgtccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccaca-cccagccAGTggggaattgatttctatgtaattcctgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326538 290 + 51301725 caggctagagtgcagtggcacaatcttggcacactgcaagctccacctcccgggttcacgccattctcctgcctcagcttcccgagcagctgggactacaggtgcccaccaccacgcctggctaatatttttgtatttttattagagacagggtttcaccgtgttagctaggatggtcttgatctcctgacctcatgatccgtccgcctcggcctcccaaagtgctgggattacaggggtgagccaccaca-cccagccagtggGGAATTGATTTCTATGTAATTCCTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018492 289 + 50890351 caggctggagtgcagtggcgcaatcttggcacactgcaagctccacctcccgggttcacgccattctcctgcctcagcttcccgagcagctgggactacaggca-ccaccaccacgcctggctaaattttttgtatttttattagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccgccctcctcagcctcccaaagtgctaggattacaggcatgagccactgca-cccagccAGTggggaattgatttctatgtaattcctgat i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45550946 157 + 49145316 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=402554.000000 s hg38.chr19_GL949753v2_alt 295369 204 + 796479 tattatctacggcttgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCGGATGTGGGGGTCAGCCGTGCTTGGGTCATGGGAGAGGCTCAATCACGGTTAATGTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT s panTro4.chr19 59251785 204 + 63644993 TATTATCTATGGCTtgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGTCAGCCGTGCTTGGGTCATGGGAGAGGCTCAATCATGGTTAATGTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102063 253 + 60714840 tattatctacggcttgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtggagcctgttgtcatgaacctctctcatcacagcggttgtgaggGCCAGCCATGCTTGGGTCATGGGACAGGCTCAGTCACGGTTCATGTCTAGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGTTTCAGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864333 203 - 106955855 tattatctatggattgtgtgatcttgggcagtactgtctcatctctgagcctcagtttccctgtgtggagcctgttgtcatgaacctcact-atcacagcggatgtgagggtcaTCCGTGCTTGGGTCATGGGAGAGGCTAAATCACGGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTTGGGACATGAGAGGATTCTGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55219136 204 + 59248254 tattatctatggcctgcgtgatcttgggcagtactacctcgtctctgagcctcagtttccctgtgtgGAGCCTGCTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGCCAGCGGCACTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCCGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47326828 204 + 51301725 TATTATCTATGGCCTGCGTGATCTTGGGCAGTACTActtcatctctgagcctcagtttccctgtgtgGAGCCTGCTGTCATGAACCTCACTCATCACAGCGGATGTGAGGGCCAGCGGCGCTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCCGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018781 204 + 50890351 tattatctatggcctgcgtgatcttgggcagtactacctcgtctctgagcctcagtttccctgtgtgGAGCCTGTTGTCATGAACCTCACTCATCACAGCAGATGTGAGAGCCAGCGGCGCTTGGCTCATGGCAGAGACTCAATCACAGTTAATTTCT-------------------------------------------------AGACTAGATTAAGACATGAGGGGTGGGGACATGAGAGGACTCTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45551103 198 + 49145316 TAAcacctcctgcccgtgtgacctt-ggctgtgacctcccatttctgagcctgagtttcctcatttgAAGCC---TGTCATGAACTCCATTCATCACAGCGGAGCT--GGGTCATTGGAGTCTGGGAGCTGCACGGGGCTCAGCCACGGGTGATTTCC-------------------------------------------------AGAGCAGGTGAAGACATGAGGGGCGGGGACATGAAGGGATGCTGGT i calJac3.chr22 I 157 T 27406 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e rheMac3.chr19 60136917 1220 + 64156825 T a score=482755.000000 s hg38.chr19_GL949753v2_alt 295573 281 + 796479 TTCAGTCTCtatgattatgtcacagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattcccaacaaacaaggtacagagggacatacctcaaaatactaaaggcgataggtgacgaaatcccagccaatatcgcaaacagggaaaaatagaaagcattccccctaagaactggagcatgacaaagatgtgcactgtcaccactc---ttcaacgtagtactggaggtccttg-ccagagcaatcaggcaagacaaagaaataaaac s panTro4.chr19 59251989 281 + 63644993 TTCAGTCTCtatgattatgtcacagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattctcaacaaacaaggtacagagggacatacctcaaaatactaaaggcgataggtgacgaaatcccagccaatatagcaagcagggaaaagtagaaaacattccccctaagaactggagcatgacaaagatgtgcactgtcaccactc---ttcaacgtagtactggaggtcctcg-ccagagcaatcaggcaagacaaagaaataaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102316 282 + 60714840 TTCAGTCTCtatgattatgtcatagaggtgcagaaaaagcatttgataaaatcctgcatcccttcatgataaaaattctcaacaaacaaggcacagagggacatacctcaaactactaaaggccaaaggtgatgaaatcccagccaatatagcaaacagggaaaagtagaaagcattccccctaagaactggagcacgacgaagatgtgcatcatcaccactc---ttcagcgtagtactggaggtcctcgcccagagcaatcaggcgagacaaagaaataaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864536 281 - 106955855 TTCAGTCTCtatgattatgtcatagaggtgcagaaaaagcatttgataaaatcctgccttccttcgtgataaaaattctcaacaaacaaggcacagagggacatacctcaaaatactaaaggccataggtgacgaaatcccagccaatacagcaaacagggaaaagtagaaagcactccccctaagaactggggcacgacgaggatgtccactgtcaccactc---ttcagcgtagtactggaggtccttg-ccagagcaatcaggcaagacaaaggaataaaac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55219340 284 + 59248254 TTCAGTCTCtatgattatgtcatagagatgcagaaaaagcatttggtaaaatcctgcatcccttcaggataaaaattctcaacaaacaaggcatagaaggacatacctcaaaatactaaagaccataggcgacgaaatcacagccaatagagcaaacagggaaaagcagaaagctttccccctaagaactggagtaagacaaagatgtccgctctcaccactcggattcgacgtagtgctggaggtcctcg-ccggagcaatcaggcaagacaaagaaataacac i macFas5.chr19 C 0 I 2987 s papAnu2.chr19 47327032 284 + 51301725 TTCAGTCTCTATGATTATGTCATAGAGATGCggaaaaagcatttggtaaaatcCTGCATCTCTTCaggataaaaattctcaacaaacaaGGCATAGAAGGACATACCTCAAAATACTAAAGACCATAGGCGACGAAATCACAGCCAATATAGCAAACAGGGAAAAGCAGAAAGCTTTCCCCCTAAGAACTGGAGTAAGACAAAGATGTCCGCTCTCACCACTCGGCTTCAACGTAGTGCTGGAGGTCCTCG-Ccggagcaatcaggcaagacaaagaaataacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47018985 283 + 50890351 TTCAGTCTCtatgattatgtcatagagatgca-aaaaagcatttggtaaaatcctgcatctcttcaggataaaaattctcaacaaacaaggcatagaaggacatacctcaaaatactaaagaccataggcgacgaaatcacagccaatatagcaaacagggaaaagcagaaagcattccccctaagaactggagtaagacaaagatgtccgctctcaccactctgactcaacatagtgctggaggtcctcg-ccggagcaatcaggcaagacaaagaaataaaac i chlSab2.chr6 C 0 I 8495 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e rheMac3.chr19 60136917 1220 + 64156825 T a score=3350.000000 s hg38.chr19_GL949753v2_alt 295854 5 + 796479 acatc s panTro4.chr19 59252270 5 + 63644993 acatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102598 5 + 60714840 acatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102864817 5 - 106955855 acatc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47327316 5 + 51301725 ttatc i papAnu2.chr19 C 0 T 68798 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e chlSab2.chr6 47019268 8495 + 50890351 I e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=389147.000000 s hg38.chr19_GL949753v2_alt 295859 773 + 796479 taaattgg---aaaaaaaaaaagtgaaattatttctgttcgctgatgatattatcttatacctcaaaaaccctaaagactcagccaaaacactcttagatttgataaagaaatgcagtaaagtttcaggatatagaatcaaagtacagaaatcagtagcatttctgtactccaataatgacgaagctgagaaccaagtcaaggaggcaatcccatggacagtgggtgcacaaaaataaaacacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagaagacacaaacagatggaaaaacatcccattctcataaatcagaataattactatgattaaaatgaccacattgcccaaagcaatctacagatttaatgcagtccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttatattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactgactcaaagtttacaaggctatagtaaccaaaagagcatgacactggtataaaaatagacatataggccagttgcagtggctcacgcctctaatcccagcactttgggaggctgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaatacaaaagaattagccaggtgtggtgATGGGT s panTro4.chr19 59252275 773 + 63644993 taaattgg---aaaaaaaaaaagtgaaattatttctgttcgctgatgatattatcttatacctcagaaaccctaaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatatagaatcaaagtacagaaatcagtagcatttctgtactccaataatgacgaagctgagaaccaagtcaaggaggcaatcccgtggacagtgggtgcacaaaaataaaacacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagatgacacaaacagatggaaaaacatcccattctcataaatcagaataattactatgattaaaatgaccacactgccccaagcaatctacagatttaatgcagtccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttatattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactgactcaaagtttacaaggctatagtaaccaaaagagcatgacactggtataaaaatagacatataggccagttgcagtggctcacgcctctaatcccagcactttgggaggctgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaatacaaaagaattagccaggtgtggtgATGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56102603 772 + 60714840 taaattgg-----aaaaaaaaagtgaaattatttctgttcg-tgatgatattatcttatacctcaaaaaccataaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatataaaatcaatgtacagaaatcagtagcatttctgtacaccaataatgacgaagctgagaaccaagtcaagaaggcaatcccattgacagtgggtgcacaaaaataaaatacctgggaatatatttaaccaaggaggtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaaattgtagatgacacaaacagatggaaaaatatcccattctcataaatcagaataattactatgattaaaatgagcacactgcccaaagcaatctacagatttaatgcaatccttacaaaaataccttcatttttcacagacttagaaaaagaaaccttaaaagttacattgagcc-aaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaactcactcaaagtttacaaggctatactaaccaaaaaagcatgacactggtataaaaatacacatacaggctgggtgcagtggctcatgcctctaatcccagcactttgggaggctgaggcaggtggattatgaggtgtcaggagttcaagaccagcttggccaacatggtgaaaccccgtctctgctaaaaaaacaaaaaaattagccaggcatggtgatgggt i ponAbe2.chr19 C 0 I 2730 s nomLeu3.chr10 102864822 773 - 106955855 taaattggaaaaaaaaaaaaaagtgaaattatttctgtttgctgatgatgttatcttatacctcaaaaaccctaaagactcagccaaaacactcttagatttgataaagaaatccagtaaagtttcaggatataaaatcaatgtacagaaatcagtagcatttctgtacgataat--tgatgaagctgagaacccagtcaag-aggcaatcccattgactgtgggtacacagaaataaaatacctgggaatgtatttaaccaaggatgtgaaagatttctacaaggaaaacttcaaaccagtgatgaaagaagttgtagatgacacaaacagatggaaaagcgtcgcgttctcat-agtcataataattactgtgattacagagaccacactgcccaaagcaatccacagatttaatgttgtccttacacaaataccatcatctttcccagacttagagagagaaacctgaaaagttatattgagtcaaaaaaaagagcccaaacagccatagcaatcctaagcaaaaagagcaaagctagagacatcacattaattgactcaaagtttacaagcctatactaaccaaaagagcatgacactggtataaaaatagacatataggccgggtgcagtggctcacgcctctaatcccagcactctgggaggccgaggcaggtggattacgag--gtcaggagttcaagaccagcttggccaacatggtgaaaccctgtctctgctaaaaatacaaaaaaagtagacaggcgtggtgatgggt i nomLeu3.chr10 C 0 I 3017 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e chlSab2.chr6 47019268 8495 + 50890351 I e papAnu2.chr19 47327321 68798 + 51301725 T e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=164819.000000 s hg38.chr19_GL949753v2_alt 296632 318 + 796479 gatctcaaattaacaacctaacatcacaactaaaagaactagagaaTAATCCgcccggcgcggtggctcacgcctgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactgaaaacacaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcacgccactgcactccagcctgggagacagCA s panTro4.chr19 59253048 318 + 63644993 gatctcaaattaacaacctaacatcacaactaaaagaactacagaagAATCAgcccggtgcggtggctcacgcctgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtttctactgaaaacacaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggagggggagcttgcaatgagccgagatcacgccactgcactccaggctgggagacagCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106105 318 + 60714840 gatctcaaattaacaacctaacatcacaactaaaagaactagggaagAATCagcctggtgtggtggctcacacgtgtaattccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcttggctaacatggtgaaaccctgtctctactgaaaacacaaaaaattagccgggcatgttggcgggcgcctgtagtcccagctactcgagaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagctgagatcacaccactgcactccagcctgggagacagCA i ponAbe2.chr19 I 2730 C 0 s nomLeu3.chr10 102868612 315 - 106955855 gatctcaaattaacaacctaacatcacaactaaaagagctagagaagAATCAgcctggtgcagtggctcacgcctgtaattccagcactttgggaggc---ggcaggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaatcctgtctctactgaaaacacaaaaaattagccgggcgtgttggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagattgccccactgcactccagcctgggcgacagCA i nomLeu3.chr10 I 3017 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e chlSab2.chr6 47019268 8495 + 50890351 I e papAnu2.chr19 47327321 68798 + 51301725 T e macFas5.chr19 55219624 2987 + 59248254 I e rheMac3.chr19 60136917 1220 + 64156825 T a score=3537.000000 s hg38.chr19_GL949753v2_alt 296950 6 + 796479 ATTgga s panTro4.chr19 59253366 6 + 63644993 ATTGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106423 6 + 60714840 ATTGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102868927 6 - 106955855 ATTGGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55222611 6 + 59248254 ATTGCC i macFas5.chr19 I 2987 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e chlSab2.chr6 47019268 8495 + 50890351 I e papAnu2.chr19 47327321 68798 + 51301725 T e rheMac3.chr19 60136917 1220 + 64156825 T a score=246057.000000 s hg38.chr19_GL949753v2_alt 296956 137 + 796479 atgcaatttagaaataaagtgaaatttcaacttttgtgtgagttatgtacattttattagtaaattagaggggatcaattgaaaataattggaattaagaaattctgtagtaagttggtataaaataaagtaaatga s panTro4.chr19 59253372 137 + 63644993 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTTGTGTGAGTTATGTACATtttattagtaaattagaggggatcaattgaaaataattggaattaagaaattctgtagtaagttggtataaaataaaataaatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106429 136 + 60714840 ATGCAATTTAGAAATACAGTGAAATTTCAACTTTCTTGTGAGTTATGTACATTTTATTAGTAAATTAGA-GGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGTTGGTATAAAATAAAATAAATGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102868933 137 - 106955855 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATGTACATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGGAAGTTGGTATAAAATAAAATAAATGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135697 136 + 64156825 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATATATATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAG-TGGTATAAAATAAAATAAATGT i rheMac3.chr19 T 1220 C 0 s macFas5.chr19 55222617 136 + 59248254 ATGCAATTTAGAAATAAAGTGAAATTTCAACTTTCTTGTGAGTTATATATATTTTATTAGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAG-TGGTATAAAATAAAATAAATGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47027763 137 + 50890351 ATGCAATTTAGAAATAAAGTGAAATTTCAATTTTCTTGTGAGTTATGTATATTTTATTGGTAAATTAGAGGGGATCAATTGAAAATAATTGGAATTAAGAAATTCTGTAGTAAGTTGGTATAAAATAAAATAAATGT i chlSab2.chr6 I 8495 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e papAnu2.chr19 47327321 68798 + 51301725 T a score=246085.000000 s hg38.chr19_GL949753v2_alt 297093 128 + 796479 actcaaaccaattactgtatcatgtatacctagcttttattt-----ataaggaatcaaagacctcatttacagattattcaagtgattgaataattgtttaaattgaaataaatatataaaattcttata----aa s panTro4.chr19 59253509 128 + 63644993 actcaaaccaattactgtatcatgtatacctagcttttattt-----ataaggaataaaagacctcatttacagattattcaagtgattgaataattgtttaaattgaaataaatatataaaattcttata----aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106565 128 + 60714840 ACTCAAACCAATTACTGTATCATGTATACCTAGCTTTTATTT-----ATAAGGAATCAAAGGCCTCATTTACAGATTATTCAAGTGATTGAATAATTGTTTAAACTGaaataaatatataaaattcttata----aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869070 128 - 106955855 ACTCGAACCAATTACTCTATCATGTATACCTAGCTTTTATTT-----ACAAGGAATCAAAGGCCTCATTTACAGATTATTCAAGTGATTGAATAATTGTTTAACTTGAAATAAATATATAAAATTCTTATA----AA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135833 126 + 64156825 ACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTT-----ATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGCTTACATTGAAATAAATATATAAAAGTCATAAA------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222753 126 + 59248254 ACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTT-----ATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGCTTACATTGAAATAAATATATAAAAGTCATAAA------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47258523 133 + 51301725 GCTCAAACCAGTCACTTTCTCCTGGATACctatctcttattttaaaaaagataaatcaaataTCTCACCTAAAAATTGTTAAAGATGTTGAATAAGTCTTTAAGTTAAAATGAGCATACAATATTCTTAcaag---- i papAnu2.chr19 T 68798 I 72243 s chlSab2.chr6 47027900 128 + 50890351 ACTCAAACCATTTACTGTATCATGTGTACCTAGCTTTTATTT-----ATAAGGAATCAAAGGCCTCATTTACAGATTATTAAAGTGATTGAATAATTGTTTACATTGAAATAAATATATAAAATTCTTATA--AA-- i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T a score=15288.000000 s hg38.chr19_GL949753v2_alt 297221 8 + 796479 taaaattt s panTro4.chr19 59253637 8 + 63644993 taaaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106693 8 + 60714840 taaaattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869198 8 - 106955855 TAAAATTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135959 8 + 64156825 TAAAATTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222879 8 + 59248254 TAAAATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47028028 8 + 50890351 TAAAATTT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T e papAnu2.chr19 47258656 72243 + 51301725 I a score=279845.000000 s hg38.chr19_GL949753v2_alt 297229 117 + 796479 caagacacttcttaagttcatcaataaacctcaattttaaaagtttaggataggaaaacttaacataaataagaaactattttctaaagcaaatatataaatgaaatcatgtcccaa s panTro4.chr19 59253645 117 + 63644993 caagacacttcttaagttcatcaataaacctcaattttgaaagtttaggataggaaaacttaacataaataagaaactattttctaaagcaaatatataaatgaaatcaagtcccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106701 111 + 60714840 CAAGACACTTCTTAGGTTCATCAATAAACCTCAATTTTAAAATT------TAGGAAAACTTAACATAAATAAGAAACTATTTCCTAAAGCAAATATATAAATGAAATCAAGTCCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869206 117 - 106955855 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACATAAATAAGAAACTATTTTCTAAAGCAAATATATAAATGAAATCAAGTCCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60135967 117 + 64156825 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACGTAAATAAGAAACTATTTTCTAAAGCAAATATATAAATGAAATCAAGTCCCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55222887 117 + 59248254 CAAGACACTTCTTAAGTTCATCAATAAACCTCAATTTTAAAAGTTTAGGATAGGAAAACTTAACGTAAATAAGAAACTATTTTCTAAAGCAAATATATAAATGAAATCAAGTCCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47330899 117 + 51301725 caagacacTTCTTAAGTTCATCAATAaacctcaatttaaaaagtttaggATAGGAAAACTTCACGTAAATaagaaactattttctaaagcaaatatataaatgaaatcaagtcccaa i papAnu2.chr19 I 72243 C 0 s chlSab2.chr6 47028036 115 + 50890351 CAAGACACTTCTTAAGTTCATCAATAAACCTCAACTTTAAAAGTTTAGGATAGGAAAAC--AATGTAAATAAGAAACTATTTTCTAAAGCAAATATATAAATGAAATCAAGTTCCAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T e calJac3.chr22 45551301 27406 + 49145316 T a score=30984.000000 s hg38.chr19_GL949753v2_alt 297346 11 + 796479 attaaaatgat s panTro4.chr19 59253762 11 + 63644993 attaaaatgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106812 11 + 60714840 ATTAAAACGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869323 11 - 106955855 ATTAAAATGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136084 11 + 64156825 ATTAAAATGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223004 11 + 59248254 ATTAAAATGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47331016 11 + 51301725 attaaaatgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47028151 11 + 50890351 ATTAAAATGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523895 11 + 49145316 ATAAAAATTGT i calJac3.chr22 T 27406 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19747031 16212 - 122678785 T a score=1184411.000000 s hg38.chr19_GL949753v2_alt 297357 395 + 796479 aagtttatatatt-------catgtattgctttaaatgtttcagaagaacagagag------taacaatagacaagtgtgcacagaaaaggcagggtagaaatgaatgacacacaagccgCGCTGTGAATAACTCCCTAACTCA-TCCAGGGAG-----CAGGTGCGTGGCCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTTCAGGTGAGCACAGGAGGGGCGGTGTGAGGTGCACCCACA-AGTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGGGCGGACCCCAGCCTCATCCCAGTCAGATCCCACCGAGGCCCGAGCAGCCTCCTGTCCTGTCATAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGCTTCATCCTCAGGGGCTCTTGGAAATGAG s panTro4.chr19 59253773 395 + 63644993 aagtttatatatt-------catgtattgctttaaatgtttcagaagaacagagag------taacaatagacaagtgtgcacagaaaaggcagggtagaaatgaatGACACACAAGCCGCGCTGTGAATAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCAGGGTCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTTCAGGTGAGCACAGGAGGGGCGGTGTGAGGAGCACCCACA-AGTGGGGTGCTTCTCTCTAAAGGAGCACGTCTTGGGTGGACACCAGCCTCATCCCAGTCAGATCCCACCAAGGCCCGAGCAGTCTCCTCTCCTGTCCTAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGCTTCATCCTCAGGGGCTCTTGGAAATGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56106823 394 + 60714840 AAGTTTATGTATT-------TATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------TAACAATAGACAGGTGTGCACAGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGCACTGTGAATAATTCCCTAACTCA-TCCAAGGAG-----CAGGTGCGCGGCCCCT----------CCTTACTCTCAGGGGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGAGCTGTGTGAGTGGCACCCACA-GCTGGGATGCTTCTCTCTAAAGGAGCACGTCTGGGGTGGACTCCAGCCTCATCACAGTCAGATCCCACTGAGGCTGGAGCAGCCTGCTCTCTTGTCTTGAGATGGCCCAGGGACC-CCGCAGGTGTGGGTGAGGGGC-TCATACTCAGGGGCTCTTGGAAATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869334 394 - 106955855 AAGTTTACATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------TAACAATAGGCAAGTGTGCACAGAAAAGGCAGGGTAGAAATGAATGACACACAAGCTGCACTGTGAATAATTCCCTAACTCA-TCCAGAGAG-----CAGGTGCACGGCCCCT----------CCTTACTCTCAGAGGTTCCCTGA---GCACAGAGGCCTTCAGGCGAGCACAGGAGGGGTGGTGTGAGGGGTACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTGGGGTGGACTCCAGCCTCATCATAGTCAGATCCCATCGAGGCCGGAACAGCCTCCTCTCCTGTCCTAAGAGGACCCAGGGACC-CCGCATGTGTGGGTGAGGGGC-TCATCCTCAGGGGCTCTTGGAAATGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136095 394 + 64156825 AAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGAAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTTCCTAACTCA-TCCAGGGAG-----CAGGTGCACAGCCCCT----------CCTTAGTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGATCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGTTGAGGGGT-TCACCCTCAGGAGCTCTTGGAAATGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223015 394 + 59248254 AAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCCCCT----------CCTTAGTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCACAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACTCAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TCACCCTCAGGAGCTCTTGGAAATGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47331027 394 + 51301725 aagtttatatatt-------catgtattgCTTTAAATGTTTCAGAAGGACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACACAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCCCCT----------CCTTACTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGGAGGGACCGTGTGAGCGGCACCCACA-GCTGGGGTGCTTCTCTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCAGAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCTCAGAGGACCCAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TTATCCTCAGGAGCTCTTGGAAATGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47028162 375 + 50890351 AAGTTTATATATT-------CATGTATTGCTTTAAATGTTTCAGAAGAACAGAGAG------GAACAATAGACAAGTGTGCACGGAAAAGGCAGGGTAGAAATGAATGACACGCAAGCCGTGCTGTGACTAATTCCCTAACTCA-TCCAGGGAG-----CAGGTGCACGGCTCCT----------CCTTACTCTCAGGAGTTCCCTGA---GCACAGAGGCCTCCAGGTGAGCACAGTAGGGACCGTATGAGCGGCACCCACA-GCTG----------CTCTAAAGGAGCAGGTCTTTGGTGGACTCCAGCCTCATCAGAGTCAGATCCCACCGAGGCCTGAGCAGCCTCCTTTCCTGTCCT---------CAGGGACC-CTGCAGGTGTGGGTGAGGGGT-TCATCCTCAGGAGCTCTTGGAAATGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45523906 395 + 49145316 AAATTTATATATT-------CAAGTATTGCTTTAATAGTTTTGGAAAAGAGGAGAG------TAACGACGGACAAGTACACACAGAAAACACAGAGTAGAAGTGAGTGACACACAAGACGGGCTGTGGCTGATTCCCTAACTCACTCCAGGGAG-----CAGGTACATGGCCTCT----------CCTTAGTCTCAGGGGTGTCCTGA---GCACAGAGGCCACCAGGTGAGTACAGGAGGGGCCATGTGAGTGGTACCCACA-GCTGGGGTGCTTCTCTCTAAAGCAGCAGGTCT-AGGTGAACTCCAGCCTCATCCCAGTCAGATCCCACTGAAGCCTGAGCAGCTTCCCCTCCTGTCCTGAGAGGGCTGTGGGATA-CTGCATGTGTGGGTGAGGGGCTCCATCCTCAGGGGCTCTTGGAAATGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19730819 408 - 122678785 AAATTTGTATTTTGCATCTGCAAGGCTCACCTCGAACG-TTCTGAGAAGCAGTCAGGGTGGTTGACACTGGACAAGTTTCCACACACAATGCAGCGCAGACACGAATTGCACAC-AGACACACTG------------CACAGCA-TCCAAGGGGACTCCTGTGTGCTCTGTCTGTGTGAACCTACCTTTGATGTCAGGTGGGCACTGAGGGGCATGGAGGCCCCGAGGGGAGCACAG--GGGGCTGTG-GAGCGGTGCTCATAGGCAGGGAGGCATCTCTCT--AGGAATGTGTCTGGTAAGGGCTCCACCTGCGCTCTCAGCAAACCCCACCTTGGTCTCAGCAG-CTCCAGGCCTGATGTGAGAGGGCTCAGAGACCTCCTCAGGTGTGAGTGAGGGGCTCCATACTCAGGGTCTTTGGAAATTGGG i canFam3.chr1 T 16212 I 13895 e mm10.chr7 3825908 29542 + 145441459 T a score=1562367.000000 s hg38.chr19_GL949753v2_alt 297752 596 + 796479 AAATAAGAGCTCCCAAGGGAGCGTCCATCTGTCCTCTCTCCAACTTGCTTGCCTCTCTTCCTCCTCCATCAGCCCCAGCGTCTTCCCCATGTCTGAGTCTGGCTGGACCCCAAATCCTCCTGATCCAGCCTGCTCTCCTTCCTCTGCTCATCACATATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCACAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGAAACAG--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTCCTAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACATGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCAACACACAGTTATTGGTAGGAGCTGACCAGGCCAAGGGAGGGCTGGGGGACGGCAGCAGGTCTAGGATGAGCCGCAACCCAGATGCCCCAGAAGGTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAGGCCAGGGCGGAAGGGGAAAAGGCTTTCTCAGAAGTTC s panTro4.chr19 59254168 596 + 63644993 AAATAAGAGCTCCCAAGGGAGCATCCATCTGTCCTCTCTCCAACTTGCTTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCATGTGTGAGTCTGGCTGGACCCCAAATCCTCCTGATCCAGCCTGCTCTCCTTCCTCTACTCATCATACATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCACAGCTGTGCTGGGTGTTGCTTTTAGCGGAAAATCTGAAACAG--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTCCTAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACATGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCAACACACAGTTATTGGTAGGAGCTGACCAGGCCAAGGGAGGGCTGGGGGACGGGAGCAGGTCTAGGATGAGCCACAACCCAGATGCCCCAGAAGGTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTGGGATGGGAAAGGCCAGGGCGGAAGGGGAAAAGCCTTTCTCAGAAGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56107217 592 + 60714840 AAATGAGAGCTGCCAATAGACTGCCCATCTGTCCTCTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCATCAGTCCCAGCATCTTCCCCACGTCCAAGTCAGGCTGGACCCCAAAGCCTCCTGATCCAGCCTGTTCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTAGGGGTCTGGGAGTCAAGCATAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGCAACAC--TGTGTGATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGATTTCTCATAATACTGTGGCTTCATCTCACGAATCTCAGACCCCAACATTGATGGATACAATTACAATTACACGTACCTGCAGCTGCCTCTCCTGGC-TTTCTAACCCTTGCA--ACACAGTTATTGGTAGGAGCCGACCAGGCCAAGGGAGGGCTGGAGA--TGGAACAGGTCTAGGATGAGCCACAACCCAGATGCCCCagaaggtcagaaatgaaagggctttgggg--gtcacttccaggcagctccttcttattcagatgggaaagcccagggtggaaggggaaaaggctttctcaGAAGTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102869728 596 - 106955855 AAATAAGAGCTCCCAAGAGAGTGTCCGTCTGTCCTCTCTCCATCTCGCCTGCCTCTTTTCCTCCTCCATCAGCCCCAGCATCTTCCCTGTGTCCAAGTCAGGCTGGACCCCAAATCCTCCTGATCCAGCCTGTTCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTAGGGGCCTGGGAGTCATGCATATCTGTGCTGGGTGTTGCTTTTAGCAGAAAATCTGAAACAC--TGTGTAATGTGTGAGAGA-GGGGAGATTCTAAA-CAGTGGGGTTTTTACAAATCTTTGCTTTCTTATAACACTATGGCTTCATCTCACGAGTCTCAGACCCCAACATTGATGGAAACAATTACAATTCCACGTACCTGCAGCTGCCTCTCCTGGCTTTTCCAACCCTTGCAACACACAGTTATTGGTAGGAGCCCACCAGGCCAAGGGAGGGCTGGAGA-CGGGAGCAGTTCTAGGATGAGCCACAACCCAGATGCCCCAGAAGGTCAGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATAGGAAAGCCCAGGGTGGAAGGGGAAAAGGCTTTCTCAGAAGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60136489 590 + 64156825 AAATAAGAGCTGCCAAGGGAGCGTCCGTCTTTC--CTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTGTCCAAGTCAGGCTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCTTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGAAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCCTAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCCTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTGGTAGAAGCCGACCAGGCCCAGGGAGGGTTGGAGA-CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCGCaggaggtcagaaatgaaagggctttgggg--gtcacttccaggcagctccttcttattcggatgggaaaacccagggtgggaggggaaaaagctttctcaGAAGTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223409 590 + 59248254 AAATAAGAGCTGCCAAGGGAGCGTCCGTCTTTC--CTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTCCCCGTGTCCAAGTCAGGCTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCTTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCCTAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCCTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTGGTAGGAGCCGACCAGGCCCAGGGAGGGTTGGAGA-CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCGCAGGAGGTCGGAAATGAAAGGGCTTTGGGG--GTCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAACCCAGGGTGGGAGGGGAAAAAGCTTTCTCAGAAGTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47331421 592 + 51301725 AAATAAGAGCTGCCAAGGGAGCGGCCGTCTTTCCTCTCTCCAACTTgcctgcctctcttcctcctccatcagCCCCAGCATCTTCCCTGTGTCCAAGTCAGGCTGGACCCCAACTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACCCATCCTGCAGGACAGGGTCGGGGCCTGGGAGTCATGCATAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGATACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATCTTTGCTTTCTCCTAATATTGTGGCTTCATCTCACGAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCAGCTGCCTCTCCTGGC-TTGGTAACCCTTGCAACACATAGTTATTGGTAGGAGCCGACCAGGCCCAAGGAGGGTTGGAGA-CTGGGGCAGGTCTAGGATGAGCCACAACCCAGATGCCCCAGGAGGTCAGAAATGAAAGGGCTTTGGGG--GCCACTTCCAGGCAGCTCCTTCTTATTCGGATGGGAAAACCCAGGGTGGGAAGGGAAAAGGCTTTCTCAGAAGTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47028537 592 + 50890351 AAATAAGAGCTGCCAAGGGAGCGGCCTTCTTTCCTCTCTCCAACTTGCCTGCCTCTCTTCCTCCTCCATCAGCCCCAGCATCTTTACCGTGTCCAAGTCAGGCTGGACCCCAGCTCCTCCTGACCCAGCCTGTGCTCCTTCCTCTACTCATCACACATCCTGCAGGACAGGGTCGGGGCCTGGGATTCGTGCATAGCTGTGCTGGGTGTTGCTTTTAGTAGAAAATCTGAACCACTTTGTGTGAGACATGAGAGA-GGGGAGATTCTAAACCAGTGGGGTTTTTACAAATTTTTGCTTTCTTCTAATATTGTGGCTTCATCTCACCAATCTCAGACCCCAGCACTGATGGA------TACAATTACACGTACCTGCGGCTGCGTCTCCTGGC-TTTGTAACCCTTGCAACACATAGTTATTTGTAGGAGCCGACCAGGCCCAGGGAGGGTTGGAGA-CTGGGGCACGTCTAGGATGAGCCACAACCCAGATGCCCCAGGAGGTCAGAAATGAAAGGGCTTTGGGG--GCCACTTCCAGGCAGCTCCTTCTTATTCGGACGGGAAAACCCAGGGTGGGAAGGGAAAAGGCTTTCTCAGAAGTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45524301 541 + 49145316 AAATCAGAGCTGCAAAGGGAGTGACTATCTGTCCTCTCTCCAGCTTGCCTGCCTCTCTTCCTCCTTCATCAGTCCCAGCATCTTCCCTGTGTCCAAGTCAGGCTGAACCCCAAATCCTGCTGACCCAAGCTATTCTCCTTTCTCTTCCCATCACACATCCCACAGGACCAGGTC--------------------------------------------TAGAAGATTGGAGAGCTTTTGTTTCTGACG-GAGAGAGGGGGAGATTCTAAAACAGTGGGGCTTTGTAAACTTGTTACTTTC--AAAATACTGTGGCTTTGTCTTACTAAGCTGAGATCCCAGGAGTGATGAG------TGAAACCGCGGGCACCTGC-TCCATCTCCGTTGGC-TTTTCAACCCTTACAAGCCTCAGTTATTGGGGGAATCAGGACAAGGCCAGAGAGGGTTGCATA-TGAGAGCAAGTCTAGGTTAAGCCACATCTCAGATGCCCCAAAAAGTCAGAAATGAGGAGGCTTTGGGGGAGTCACCTCCAGGCAGCTCCCCCTTATTCAGATGGG-GAGTCCAGGGTGTGAGGGGAA-----CTTCTTAGAAGTTC i calJac3.chr22 C 0 I 18403 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I a score=645059.000000 s hg38.chr19_GL949753v2_alt 298348 286 + 796479 tgaggtaggatgtgggactttggaggcggggactcagacaccacaccagattgagaactagctaaaacagggcaga-------gggtggaagcagctcttcttaagacacgcccaccagtgtggcatcccggtttaccgttgccatggcaacccccggaaggtaccgcccttttccacggcaaagacccactgaccggaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagagtggctgcaggtgtgtttct s panTro4.chr19 59254764 286 + 63644993 tgaggtaggatgtgggactttggaggcggggactcaggcaccacaccagattgagaactagctaaaacagggcgga-------gggtggaagcagctcttcttaagacacgcccaccaatgtggcatctcggtttaccattgccatggcaacccccggaagttaccgcccttttccacggcaaagacccactgaccggaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagtgtggctgcaggtgtgtttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56107809 286 + 60714840 tgaggtaggatgtgggactttggaggcggggactcagacaccacaccagattgaaaactagctaaaacagggcggg-------gggtggaagcagctcttcttaagacacccccaccagtgtggcatcccagtttacctttgccatggtaacccctggaaggtaccgcccttttccacagcaatgacccactgactcgaagttaccgccctttttctaggaatttctgcatacctgacctttaatttgcatataattagaagcaggtacaagtgtggctgcagctgtgtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870324 286 - 106955855 Ggaggcaggatgtgggactttggaggtgggaatgcagacaccacaccagattgagaactagctaaaacagggcggg-------gggtggaagcagctcttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacccccggaagttaccgcccttttccatggcaaggacccactgactggaagttaccgccctttctctaagaatttctgcatacctgacctttaatttgcatataattaaaagcaggtacaagtgtggctgcagctgtgtttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60137079 290 + 64156825 tgaggtaggatgtgggactttggaggcggggactcagacgccaccccagattgacacctagttaatatagggcggg--aggaggggtagaagccgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagttaccgccctttcccaaggcgaagacccactgaccggaagttaccaccctttc-ctaggaatttctgcatacgtgccctttaattagcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55223999 290 + 59248254 tgaggtaggatgtgggactttggaggcggggactcagacgccaccccagattgacacctagttaatatagggcggg--aggaggggtagaagccgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagttaccgcccttttccaaggcgaagacccactgaccggaagttaccaccctttc-ctaggaatttctgcatacgtgccctttaatttgcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i macFas5.chr19 C 0 T 16998 s papAnu2.chr19 47332013 290 + 51301725 TGAGGTAGGATGTGGGACTTTGGAGGCGGGGACTCAGACGCCACCCCAGATTGACACCTAGTTAATATAGGGCGGG--AGGAGGGGTATAAGCCGCTGTTCTTAAGACACGCCCACCAGCGTGGCAtctcagtttaccattgccatggcaacgcCCGGAAGTTACTGCCCTTTTCCAAGGCGAAGACCCACTGACCGGAAGTTACCACCCTTTC-CTAGGAATTTCTGCATAGGTGCCCTTTAATTTGCCTATAATTAAAAGCAGGTACAAGAATGACTGCAGCTGTGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47029129 292 + 50890351 tgaggtaggatgtgggactttggaggcggggactcagacaccaccgcagactgagaactagctaatacagggcggggtggggagggtggaagctgctgttcttaagacacgcccaccagcgtggcatctcagtttaccattgccatggcaacgcccggaagtcaccgcccttttccaaggcgaagacccactgaccggaagttaccaccctttt-ctaggaatttctgcatacgtgtcctttaatttgcctataattaaaagcaggtacaagagtgactgcagctgtgtttct i chlSab2.chr6 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I a score=236437.000000 s hg38.chr19_GL949753v2_alt 298634 142 + 796479 gagctgctattctgggcacaccgcctgtggggcagccctgccaccctaggagcagtacct---------ctgctgctgctgtgctcggccacttgactagaggttgccgtaacccttaaggggttgtgtaacaccagctcacccttaaatt s panTro4.chr19 59255050 142 + 63644993 gagctgctattctgggcacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctgtgctcggccacttgactagaggttggcgtaacccttaaggggttgtgtaacaggagctcacccttaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56108095 140 + 60714840 gagctgctattctgggtacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctgtgcacggccatttgactagaggttggcataacccttaaggggttatgtaacaccagctcaccctt--act i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870610 142 - 106955855 gagctgctatcctgggcacactgcctgtggggcagccctgctaccctaggagcagtacct---------ctgctgctgctttgcaaggccacttgactagaggttggcgtaacccttaaggggttatgtaacaccagctcacccttaaatt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60137369 151 + 64156825 aggctgctgttctgggcaccctgcctgcggggcagccctgctACCTGACCCGGAGTACCTctgctgctgctgctgctgctgTGCATGGCCGCTTGACGAGAGGTTGGCGTAACCCTTAAGGGGTTAGGTAACACTAGCTCACCCTTAAATT i rheMac3.chr19 C 0 I 5568 s papAnu2.chr19 47332303 142 + 51301725 GAGCTGCTgttctgggcacactgcctgcGGGGCAGCCCTGCTACCTGAGGCGGagtacct---------ctgctgctgctgtgcatGGCCGCTTGACGAGAGGTTGGCATAACCCTTAAGGGGTTAGGTAACACTAGCTCAcccttaaatt i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47029421 142 + 50890351 gagctgctgttctgggcacactgcctgcggggcagccctgctacctgaggcggagtacct---------ctgctgctgctgtgcatggccgcttgacgagaggttggcgtaacccttaaggggttaggtaacactagctcacccttaaatt i chlSab2.chr6 C 0 I 21 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e macFas5.chr19 55224289 16998 + 59248254 T a score=1308456.000000 s hg38.chr19_GL949753v2_alt 298776 1099 + 796479 ccttttttttttgttttt-gagatagagttttactctgtcacccaggttgaagtgcaatggcgccatctcggctcgctgcaatctctgcctccggagttcaagcgattctcctgcctcggttccgaagtagctggaattacaggcaccagccaccacaccctgctaatttttgtag-tctttagtagagacggggtttcaccgtgttggccaggttggtctcagac-tcctgacctcaaatgatctgcccgcctcagccttccaaggtgctgggatgacaggtgtggaccaccgcgaccggcctaaattctttcttaggcaaagccaagaactcttctgggctatgccccgatttgggagctccccttccccgcatcatctagttaccaggaagggatgacggagacagcgagtgagaggcagagagactttccgcagaggcagggacaattaggagagaggcgagatggctagacagcagagatggtga----cagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagcgagaggttgctgagacagtcggagagacagcg-gggcggggcagtctgtgatcagggctccaagagcggtcacac--aggctgtaacagtaaacagctgctaatactgcagagctgtcacactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagcgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcaccggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccatgtggaagatttttgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccgtaatatctggtgagcCGTAtgggtaatgcgagcactagacacctaaaccccaccagaacgcaatgcatccatgtaaggaacctgcgcgtgtagcgcctgaatctaaaaaa--aTAGAGTAACATTAAA------------AACAACAACAACA-----ATAAAgccgtgtgaggtggctcacgcctgtaatc s panTro4.chr19 59255192 1103 + 63644993 tttttttttttttttttt-gagacggagtttta--ctgtcacccaggctgaagtgcaatggcgccatttcggctcgctgcaatctctgcctccggagttcaagcgattctcctgcctcagctcttaagtagctggcattacaggcacccgccaccacaccctgctaatttttgtag-tctttagtagagacggtgtttcaccatgttggccaggttggtctcagac-tcctgacctcaaatgatctgcccgcctcagccttccaaggtgctgggatgacaggtgtgaaccaccgcgaccggcctaaattctttcttaggcaaagccgggaactcttctgggctatgccccgatttgggagttcaccttccccgcattatctagttatcaggaagagatgacggggatagcgagtgagaggcagagagactttcagcagaggcagggacaattaggagagaggcgagatggctagacagcagagatggtgacagtcagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagccagaggttgctgagacagtcggagagacagcg-gggcggggcagtctgtgatcagggctccaggagcggtcacactgaggctgtaacaataaacagctgctaatactgcagagctgtcacactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagcgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcaccggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccatgtggaagattttcgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccgtaatatctggtgagcCGTAtgggtaatgcgagcactagacacctaaaccccaccagaacgcaatgcatccatgtaaggaacctgcgcgtgtagcgcctgaatctaaaaaa--aTAGAGTAACATTAAA------------AACAACAACAACA-----ATAAAgccgggtgagttggctcacgcctgtaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56108235 1116 + 60714840 tttttttttttttttttt-gagacggagtttcactctgtcacccaggctgaagtgcaatggcgccatctcggcttgctgcaatctccgcctccggggttcaagcgattctcctgcctcagctcctaaggagctgggattacaggcacccaccaccacgccctgctaatttttgtag-tctttagtagagacggggtttcaccgtgttggccaggttggtctcggac-tcctgacctcaagtgatctgcccgcctcagcctcccaaagtgctgggatgacaggtgtgaaccactgcgaccggcctaaattctttcttaggcaaagccaagaactcttctgggctatgccccgatttgggagctcaccatccccgcatcatctagttaccaggaaggggtgatgaggacagcgagtgagaggcagcgagactttccgcagaggcagggacaattagcagagaggcgagatagctagacagcagagatggtgacagtcagtgatcagtggaggggtggcaaagagtgaaagacatggagaggtggCACTGGGCTAGACAGCAAGAGGTTGCTGAGATAGTTGGAGAGACAGCA-GGGCGGGGCAGTCTGTGATCAGGGCTCAAagagtggtcacactgaggctgtaataataaacagctgctaatactgcagagctgtcatactaacaaaaggctttgcttttggcaccttcatctttccttggatagtggtggagctcagcgatgggcaaggaggtgagacccccgctccaaccgacaggcccatgggttaccagtccctgcactggacccctgggtgacagctgagcccacccaagctgggggatcctgcagaga-ccttcacctgggccccaggt-gaagattttcaatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccataatatccgatgaGTTGTAtgggtaatgcgagcactagacacctaaacctcaccagaacgcaatgcatccatgtaaggaacctgcgcatgtagcacctgaatctaaaaaa--aTAGAGTAACATTAAAaacagcaacaacaacaacaacaaca-----aAAAagccgagtgaggtggctcacgcctgtaatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102870752 1113 - 106955855 cctttttttttttttttt-gagacggagttttgctctgtcacccaggctggagtgcaatggcgccatctcagctcgctgcaatctccgcctccggggttcaagtgattctcctgcctcagctcctaagtagctgggattacaggcacccgccaccacgccctgctaatttttgtag-tctttagtagaaacgaggtttcactttgttggccaggttggtctcgaac-tcctgacctcaagtgatctgcctgcctcagccttccaaagtgct-ggatgacaggtgtgaaccaccgcgaccggcctaaattctttcttaggcaaagccaagagctcttctgggctatgccccgatttgggagctcaccttccctgcatcatctagttaccaggaagggatgatgaggacagcgagtgagaggcagagagactttcagcagaggcagggacaattagcagagaggcgagatggctagacagcagaggtggtgacagtcagtgatcagcggaggggtggcaatgggtgaaagacacggagaggtggcactgggctagacagcgagaggttgctgagacagttggagagacagca-gggcggggcagtctgtgatcagggctccaagagcggtcacactgaggctgtaacaataaacagctgctaatactgcagagctgtcctactaaccaaaggctttgcttttggcgccttcatctttccttggatagtggtggagctcagtgatgggcaagcaggtgagacccccgctccaaccgacaggcccatgggttaccagtccccgcactggacccctgggtgacagctgagcccacccaagctaggggatcctgcagagacccttcacctgggccccatgtggaagattttcgatgttatttaggcttttggggatgggggagtgtcccctctgcctcccccataatatctggtgaGctatatgggtaacgcaagcactagacacctaaacctcaccagaatgcgatgcatccatgtaaggaacttgtacgtgtagcacctgaatctaaaaaaaCATACAGTaacattaaa------agcaacaacaacgacaaca-----aaaaAgccgggtgaggtggctcacgcctgtaatc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47332463 1081 + 51301725 ttatttatttattttttt-gagacgtagtttcgctgtgttgcccaggctgaagtgcaatggcgccatctcggctcactgcaacctccgcctcaag------------------------gCTCctaagtgactgggattacaggcgcccgccaccacgccctgctaatttttgtagttttttagtagagagggggttttaccgtgttggccaggctggtctcggac-tcctgacctcaggtgatccacccacctcagcctcccacagtgctgggatgacaggtgtgagccaccgcgcccggcctaaattctTTCTTAGGCAAAGCCAAGAACTGTCCTGGGCTATGCCCCAATCTGGGAGCTCACCTTCCCCGCATCATCGAGTGACCAGGAAAGGATGATGAGGACAGCGAATGAGAGGTAGAGAGACTTTCAGCCGAGGCAGGGACAATTAGCGGAGAGGCGAGATGGCTGGACAGCAGAGATGGTGACAGTCAGCGATCCAAGGAGGGGTGGCAATGGGTGAGAGACACGGAGAGGTGGCACTGGGCAAGACAGCGAGAGGTTGCTGAGACAGGTGGAGAGACAGCGAGGACAGGGCAGTCTGTGATCAGGGCTCCAAGAGCGGTCACACTGAGGCCATAACGATAAACAGCTGCTAATGCTGCAGAGCTATCATACTAACCAAAGCCTTTGCTCTTGGCGCCTTCATCTTTCCCTGGCTGGTGGTGGAGCTCAGCGACGGGCAAGCAGGTGAGACCCCCGCTCCAACCGGCAGGCCCATGGGTTACCAGTCCCCGCACTGGACCCCTGGGTGACAGCTGAGCCCACTCAAGCGGGGGGATCCTGCAGAGA-CCTTCACCTGGGCCCCATGTGGAA--------ATGTTATTTAGGCTCTTGGCGATGGGGAAGTGTCCGCTTTGCCT-CCCCATAATATCTGGTGAGCTATATGGGTAATGCGTGCCCTAGACACCTAAACCTCACCAGAACACAATGCATCCATGAAAGGAACCTGCGTGTGTAGCACCTGAATCTaaaaaa--aTAGAGtaacattaaa----------acaacaacaacaacagcatccaaaagccgggtgaagtggctcacgcctgtaatc i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47029584 1095 + 50890351 ttatttatttatttttttggagacggagtttcgctgcgttgcccaggctgaagtgccatggcgccatctcggctcactgcaacctccgcctcaagggttcaagcgattcttctgcttcagctcctaggtgactgggattacaggcgcccgccaccacgccctgctaatttttgtag-tttttagtagagagggtgttttactgtggtggccaggctggtcttgaactttctgacctcaagtgatccacccacctcagtctcccacagtgctgggatgacaggtgtgagccaccgc-----gcctaaattctttcttaggcaaagccaagaactgacctgggctatgccccaatctgggagctcaccttccccgcatcGTCTAGTGACCAGGAAAGGATGATGAGGACCGCGAGTGAGAGGC--AGAGACTTTCAGCCGAGGCAGGGACAATTAGCAGAGAGGCCAGATGGCTGGACAGCAGAGATGGTGACAGTCAGCGATCCGCAGAggggtagcaatgggtgagagacacggagaggtggcactgggcaagacagcgagaggttgctgacacaggtggagagacatcgaggacagggcagtctgtgatcagggctccaagagccatcacacagaggccgtaacgataaacagctgctaatactgcagagc--tcatactaaccagaggctttgctcttggtgccttcatctttccctggctggtggtggagctcagcgacgggcaagcaggtgagacccccactccaaccagcaggtccatgggttaccagtcccggcactggacctctgggtgacagctgagcccacccaagcggggggatcctgcagaga-ccttcacctgggccccatatggaa--------atgttatttaggctcttggggatggggaggtgtccgctttgcctcccccataatatctggtgaGctatatgggtaatgcgtgccccagacacctaaacctcaccagaacacaatgcatccatgtaaggaacctgcgtgtgtagcacctgaatctaaaaaa--aTAGAGTAACATTAA-------------AACAACAACAACAGCATCAAAAAgccgggtgaggtggctcatgcctgtaatc i chlSab2.chr6 I 21 I 23417 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=4628.000000 s hg38.chr19_GL949753v2_alt 299875 6 + 796479 tcagaa s panTro4.chr19 59256295 6 + 63644993 tcagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56109351 6 + 60714840 tcagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102871865 6 - 106955855 tcagaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47333544 6 + 51301725 ctagaa i papAnu2.chr19 C 0 T 19545 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47030679 23417 + 50890351 I e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=668515.000000 s hg38.chr19_GL949753v2_alt 299881 1281 + 796479 ctttgggaggccgaagcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaacaccgtctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacgcctgtaatcctagcactttgtgaggccaaggcggacagatcacctgcggtcaggagttcgagacaagcctggccaacatggtgaaaccccatctctattaaaaat-taaaaattagccgggcatgatggtgggcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaacccaggaggtgaaggttgcagtgagccgagatggtgccactgcattccagcctaggcgacagagagaagcttcgtctc---aaaaaaaaaaaaaagagaaaaaaTGGTCCACAATAAAATAACAGGCGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGAAGTATAAGTATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCAC-AAAAAACCCTAAATGTAATGACGTTAATGCAGTTCCTGACAGTGACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCCTTCCTGACCGTATGACGCAATGAAATTTCGATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt--------------------------------------ttttcttttcttttactttgagatggagtctcgctctgtcacccaggctggagtgcaacagcctgacctcagctcactgcaacctctgctacccatgttcaagtgattctcctgtctcagtctcccaagtagct-ggatgacaggcatgagccaccacgcccagttaatttttgtatttttagtagagacaggatttcaccctgttggtcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTGGATGGGTTACAGCCGTTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT s panTro4.chr19 59256301 1297 + 63644993 ctttgggaggccgaagcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacgcctgtaatcctagcactttgggaggccaaggcgtacagatcacctgcggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatataaaaattagccgggcatggtggtgggcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaaccctggaggtgaaggttgcagtgagccgagatggtgccactgcattccagcctaggcgacagagagaagcttcgtctcaaaaaaaaaaaaaaaaagagaaaaaaTGGTCCACAATAAAATAACAAGTGGTTATTTTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTACTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGAAGTATAAGTATTTTAGAGTTGCTTCATGAATTTTTTTGCTAAAATCTAAAAAGAAAACCCAC-AAAAAACCCTAAATGTAATGACGCTAATGCAGTTCCTGACAGTCACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCCTTCCTGATCGTATGACGCAATGAAATTTGAATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt----------------------------ttttattttattttcttttattttactttgagatggagtctcgctctgtcacccaggctggagtgcaacagcctgacctcagctcactgcaacctctgcctcccatgttcaagtgattctcctgtctcagtctcccgagtagctgggatgacaggcatgagccaccacacccagttaatttttgtatttttagtagagacaggatttcaccctgttggtcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcctggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTGGATGGGTTACAGCCGTTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56109357 1294 + 60714840 ctttgggaggccgaagcggatggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaataccatctctactgaaaatacaaaaacttagctgggcatggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgtggtgactcgcacctgtaatcctagcactttgggaggccaaggcgggcagatcacctgcggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatataaaaatcagccgggcatggtggtgagcacctgtaatcccagctactggggagtctgaggcaggagaatcacttgaacccaggaggtgaaggttgcagtgagccaagatggtgccactgcattccagcctaggcgacagagagaaacttcgtctc---aaaaaaaaaaagaagagaaaaaaTGGTCCACAATAAAATAACAAGTGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAATTTTTTCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATTTGAAGTCCTAATATAAATTTAATTTACCATATTGATGTATAAGTATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCACAAAAAAACCCTAAATGTAATGACGTTAATGCAGTTCCTGACATTGACTTTTAGCCCTTCTGCAAACTTTTGTTTCGTTGCTTTCCTGACCATATGACGCAATGAAATTTGAATTTGCTTCAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTATGAGCTTCTCTCATCt----------------------------ttttattttattttcttttcttttactttgagacggagtcttgctctgtcacccaggctggagtgcaacgacctgacctcagctcactgcaacctctgcctcccatgttcaagtgagtctactgtctcagcctcccgagtagctgggatgacaggcatgagccaccacgcccagttaatttttgtatttttagtagagacaggatttcaccatgttgatcaggctggtctcgaattcctcacctcaggtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccactgtgcctggccAGGATATTTTTTTCTTTAGAGCACTTACTTCACTTTCTTTGAGTGAAGTTAGATGGGTTACAGCCATTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102871871 1308 - 106955855 ctttgggaggccgaagcggatggatcacctgaggtcaggagtttgagatcagcctggccaacatggtgaaacaccatctctactgaaaatacaaaaacttagctgggcttggtggtgggtgcctgtaatcccagctactcATGAATTATCATGAAGAGAAAATGggccaggtgcggtgactcacacctgtaatcctagcactttgggaggccaaggcgggcagatcacctgctgtcaggagttcgagagaagcctggccaacatggtgaaaccccatctctactaaaaatataaaaattagccggacatggtggtgggcacctgtaatcccagctactggggagtctgaggcagaagaatcacttcaacccaggaggtgaaggttgcagtgagccaagatggtgccacttcattccagcctaggcgacagagagaaacttcgtctc----------aaaaaaagagaaaaaaTGGTCCACAGTAAAATAACAAGTGGTTATTGTACCTGAATTTATCAGTAAAAAATTGAA-TTTTCCTTTTATTGCCTAGAGTCCACCTTCTATCAATGTCACAAGCATGACACTCAGAACAGAGAGGAAAAGATTATATCTGAAGTCCTAATATA-----AATTTACCATATTGATATATAAATATTTTAGAGTTGCTTCATGAA-TTTTTTGCTAAAATCTAAAAAGAAAACCCACAAAAAAACCCTAAATGTAATGACATTAATACGGTTCCTGACATTGACTTTTAGCCCTTCTG-AAACTTTTGTTTCATTGCCTTCCTGACCATATGACGCAATTAAACTTGAATTTGCTTTAATTTCTGCTTCCTCTTTCCCTATGTTTCAGTTCTGAAGGTAAGCACTTCTCTCATCTTTttttaatttaatttaatttaatttaattttattttattttattttattttactttgagacagagtctcgctctgtgacccaggctggagtgcaacggcctgacctccgctcactgcaacctctgcctcccatgttcaagtgattctcctgtctcagcctcccgagcagctgggatgacaggcatgagccaccacacccagttaatttttgtatttttagtagagacaggatttcaccatgttggtcaggctggtcttgaattcctcacatcaggtgatccacctgctttggcctcccaaagtgctgagattacaggtgtgagccaccgtgcccggccAGGATATTTTTTTCTTTAGAGCACTTACTTCATTTTCTTTGAGTGACGTTGGAGGGGTTATAGCCATTGTGGTGTTACAAAGAATAATTCTGAGAGAAAT i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47030679 23417 + 50890351 I e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=374307.000000 s hg38.chr19_GL949753v2_alt 301162 444 + 796479 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGAGACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTTTTGCATGTCCATTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATGAGTAAATGAGTTGGAATTTATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTTGGGTTTTATTATACTTAATTTCATTTTAATGTTATTTCATGTGAGATTACTTGAATACAAGCTGTTGCATAATTGCTCCCAAGTGGAGTCTTTGCTGTGCACTTGCATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCAGGGCAGCGTGTGGGTG s panTro4.chr19 59257598 444 + 63644993 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTCTTGCATGTCCATTGTACatttaatattttaatttacaatgagtttacaaataatttttacaaataaatgttacaaataaaaataatttaCAATGAGTAAATGAGTTGGAATTTATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTTGGGTTTTATTATACTTAATTTCATTTTAATGTTATTTCATGTGAGATTACTTGAATACAAGCTGTTGCAAAATTGCTGCCAAGTGGAGTCTTTGCTGTGCATTTGCAAACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCAGGGCAGCGTGTGGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56110651 439 + 60714840 ATCGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACTACATAATGCATTTATTTACAAGTCTTTTTTTGCATGTCCATTGtaaatttaatattttaatttaCAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAGACAATTTACAATGAGTAAATGAGTTGGAATTAATTTACATGCTTATGGCTGCCTTTGATTAAACTTCTTCCAA----AAACTCTGTCCAGATGTT-GGTTTTATTATACTTAATTTGATTTTAATTTTATTTCATGTGAGATTACTTGAATACAAGTTGTTGCATAATTGCTACCAAGTGGAGTCTTTGCTGTGCATTTGGATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATAGCCAGGGCAGCGTGTGGGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102873179 442 - 106955855 ATCGTTATGTGTTGGTAAAATAAAAGTGTCTTAAGTTAAAAGTTTCCTTTGACACCCAATAAAGAAATTAGTATTACCACATAATGCATTTATTCACAAGTCTTTTTTTGCATGTCCACTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATGAGTAAATGAGTTGGAATTTATTTACACGCTTATGGCTGCCTTTGATTAAACTTCTTCCAAAAATAAACTCTGTCCAGATGTT-GGTTTTATTATGCTTCATTTCATTTTAATTTTATTTCATGTGAGATTACTTGAATACAAGTTGTTGCGTAATTGTTATCAAGTGGAGT-TTTGCTGTGCATTTGCATACCCCAGAGTGGGAGGTTTGGGGATTCTGAATGGCCGGGGCAGCGTGTGGGTG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47054096 441 + 50890351 ATTGTTATTTGTTGGTAAAATAAAAGTGTCTTAAGTTACAAGTTTCCTTTGACACCCAATAAAGAAATTAATATTACTTCATAATGCATTTATTTACAAG--TTTTTTTGCATGTCCACTGTAAATTTAATATTTTAATTTACAATGAGTTTACAAATAATTTTTACAAATAAATGTTACAAATAAAAATAATTTACAATTAGTAAATGAGTTGGAATTTATTTACATGCTTATGACTGCCTTTGCTTAAATTTCTTCCAAAAATAAACTCTGTCCAGATGtt-agttttattatacttaatttaattttaattttatttcatGTGAGATTATCTGAATACAAGTTGTTGCATAATTGCTACCAAATGGAGTCTTTGCTGTGCATTTGCATGCCCTAGAGTGGGAGGTTTGGAAATTCTGAATGGCCAGGGCACCATGTGGGTG i chlSab2.chr6 I 23417 T 19868 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=576843.000000 s hg38.chr19_GL949753v2_alt 301606 1132 + 796479 TACCTTCACAGGCCTGATGTGTGAGCCTTCAAACACCGGGGTGGAGGAAGTGATTAAATAGAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACCTGGGGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGGCGTCACTGACAATGAACACAAAGGGGCTGAATGTCGGGAATCCTGCAGACGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGATTCTGAATCTGGGTTACGCACAATGACAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGATGAGGATGGTGTGTGTGGTTGTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCGGCTGCGAACATGTTGGACTCTCTGCTTGTATCTATGCAGGACGAGGACCATGGAGCTGCTGGTGCAGATCATGAGGGAGACACATATACGGGAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCGATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTCTTTATTGGGTCAGTTATTTACTTTGCAGTATAAATATTTACAACAAGATTCAAGATCCAACAGAGGAAACAGCAGAAAACTATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTCATGGCCTGGAAGCCACTGAAGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGGAAAGGTTTCAATCCAAAAGCCGCCACTGTCTGAGGGATCCCTTTAGAGAAAAGAACCGGGTTGTTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGGGACAAAAGTAAAGCTATAAAAGTAAAGGAGTAGAGAATTTCCAAGGATTCCAGCAGCGGTCTGAATGAGAAAGGTAATACTCCAATTTAAGTTAACAGAAACCA---TCTCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTCATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT s panTro4.chr19 59258042 1132 + 63644993 CACCTTCACAGGCCTGATGTGTGAGCCTTCAAACACCGGAGTGGGGGAAGTGATTGAATAGAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAAAGACCATACCTGGGGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGACATCACTGACAATGAACACAAAGGGGCTGAATGTCGGGAATCCTGCAGAAGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGATTCTGAATCTGGGTTACGCACAATGATAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGATGAGGATGGTGTGTGTGGTTGTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCGGCTGTGAACATGTTGGACTCTCTGCTTGTATCTATGCAGGACGAGGACCATGGAGCTGCTGGTGCAGATCGTGAGGGAGACACATATACGGGAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCGATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTCTTTATTGGGTCAGTTATATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCAACAGAGGAAACAGCAGAAAACTATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTCATGGCCTGGAAGCCACTGAAGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGAAAAGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATCCCTTTAGAGAAAAGAACCGGGTTGTTGGCTAAGACCAGCTGGCTGAGAAACAGGTCTCTGGGTCTAACTATTTGTGTGGGGACAAAAGTAAAGCTATAAAAGTAAAGGAGTAGAGAATTTCCAAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACTCCAATTTAAGTTAACAGAAACCA---TCTCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTAATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56111090 1115 + 60714840 GACCTTCACAGGCCCAATATGTGAGCCTTCAAACACTGGAGTGGGGTTATTAATTAAATAAAGGATGCAATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACTTGGAGCATTTCTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCGGGCGTCACTGACAATGAACACAGAGGGGCTGAATGTCGGGAATCCTGCAGACGCCAGGAAAGAGGTACTTCTCAGCCATTGGCTTGGGTTCTGAATCTGGGTTACACACAATGATAAAATATCAGCTAGAGCATGAGAGGAGACAAACATGCTCACCAGGACGAGGATAGTGTGTGTGGCTCTGGTTTCATGAGACGTTCTGTGGGAGAGGTTGCAGCTGTGAATGTGTTGGACTCTC----TGTGCCTATGAAGGATGAGGACCATGGAGCTGCTGGTGCAGATCATGA---------------GGCAGACACATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTACATACAGCAATCTTCCTGGATAGGGTGAGGAGCAGTATCTATACATTTTTTCCACACGCATGTTTCTGCTCTTTATTGGGTCAGTTATATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCACCAGAGGAAACAGCAGAAAACTATACACTTTGGGGATCTAATTCGGAGTTCCATCTTCCGAGAGATACTGGGGTGAAGCTTCATGGCTTGGAAGCCACTGAGGAGGCAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGGTAGAAGACAAGTTTACATCCAGCCTCATCCAGGAAAGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATCCCTTTAGAGAAAAGAACCAGGTTGTTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGGGACAAAAGTAAAGCTAT-AAAGTAAAGAAGTAGACAATTTCCAAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACCGCAATTTAAGTTAACAGAAAACAGTCCATCCATTTAGAGGAGATGTTGGAGTTTGATTCTATTTTCATCAGAGGAATCTGTAGACTGAAAAATACAATTGAGTGTTTTCACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102873621 1119 - 106955855 TACCTTCACAGGCCCGATATGTGAGCCTTCAAACACCGGAGTGGGGGAAGTAATTAAATAAAGGATGCGATGGTCTGGAGGCAATTTATAGCCCAGAGACCATACTTGGAGCATTTTTCTTCCTTATCTAGCACACAAAGTAGAACCGTGACACTCAGGCGCCATTGACAATGAACACAAAGGGGCCGAATGTCGGGAATCCTGCAGACGCCAGGAAAGGGGTACTTCTCAGCCATTGGCCTGGGTTCTGAACCTGGGTTACGCACAGTGACAAAATACCAGCCAGAGCATGAGAGGAGACAAACATGCTCGCCAGGACGAGGATGGTGTGTGTGGCTCTGGTTTCATGAGATGTTCTGCGGGAGAGGTTGCAGCTGTGAACGTGTTGGACTCTCTGCTTGTGCCTATGAAGGATGAGGACCATGGAGCTGCTGGTGCAGATCATGA---------------GGGGGATGCATATACCATCTGTGCAGCAGTAAATGACTGCAACTATTGCATACAGCAATCTTCCCGGACAGGGTGAGGAGCAGTATCTATACATTTTTTCCATACTCATGTTTTTGCTC-TTATTGGGTCAGTTACATACTTTGCGGTATAAATATTTACAACAAGATTCAAGATCCAGCAGAGGAAACAGCAGAAAACGATAAACTTTGGGGATCTAATTCAGAGTTCCATCTTCCCAGAGATACTGGGGTGAAGCTTAATGGCCTGGAAGCCACTGAGCAGGTAGGTGGTGCTGAGGGAAACCCCTCTGGCCACTCTGTGTAGATAGTAGACAAGTTTACATCCAGCCTCATTCAGGAAGGGTTTCAATCCAAAAGCCGCCATTGTCTGAGGGATGCCTTTAGAGAAAAGAACCAGGTTATTGGCTAAGACCAGCTGGCTGAGAATCAGGTCTCTGGGTCTCACTATTTGTGTGGTGACAAAAGTAAAGCTAAAAAAGTAAAGGAGTAGAGAATTTCGGAGGATTCCAGCAGCAGTCTGAATGAGAAAGGTAATACCCTAATTTAAGTTAACAGAAACCAGACCATCCATTTAGAGGAGATGTTGGAGTTTAATTCTATTTCCATCAGAGGAATCTGTTGACTGAAAAATACAATTGAGTGTTTTCACTGT i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=100706.000000 s hg38.chr19_GL949753v2_alt 302738 407 + 796479 ACCCGGTTtcatgcgcttccgtgtgaagagaccactaaacaggctttgtgtgagcagtaaagcttttaatcacctgggtgcaggtgggctgagtccaaaaagagagtcatcgaagggagataggggtggggccattttataggatttgggtaggtaaaggaaaaagaggggttgttctctggtgggcaggtgtgggggtcacaaggtgctccgtagaggagcttttgagccaggatgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaggaacaagccattttcacttcttttgtggtggaatgtcatcagttaaggcag-------------------gaaccagccatctggatgtgtatgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgac s panTro4.chr19 59259174 396 + 63644993 ACCCGGTTtcatgcgtgtccgtgtgaagagaccactaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtcc-aaaatagagtcatcgaagggagataggggtggggccattttataggatttgggtaggtaaaggaaaaagaggggttgttctctggtgggcaggtgtgagggtcacaaggtgctccttaggggagcttt----------tgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaggaataagccattttcacttcttttgtggtggaatgtcatcagttaaggcag-------------------gaaccagccatctggatgtgtacgtgcaggtcacaagggatatgatggcttagcttgggctcagaggcctgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112205 423 + 60714840 ACCCAGTTtcatgcgcgtccatgtgaagagaccactaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggcgggctgagtcc--aaaaagagtcagcgaagggagataggggtggggccgttttacaggatttgggtaggtaaaggaaaaaggggggttgttctctggcaggcaga-gtgggggtcacaaggtgctcagtgggggagcttttgagccaggatgagccaggagaagggatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaactggccatctggatgtgaactggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgac i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102874740 0 - 106955855 C e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=73449.000000 s hg38.chr19_GL949753v2_alt 303145 142 + 796479 aCCCAGAAAATGCCTTTTTCTCACGAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACAATTacaaagctatttattccaaaattatgatttgtaaaactacaatgacttgaacccacttaatttcaa s panTro4.chr19 59259570 142 + 63644993 aCCCAGAAAATGCCTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACTATTacaaagctatttattccaaaattatgatttgtaaaaccacaatgacttgaacccacttaatttcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112628 142 + 60714840 aCCCAGAAAATGCCTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAaacattaagaacaaacttgtacaattacaaagctatttattccaaaattatgatttgtaaaaccacgatgacttgaacctacttaatttcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102874740 140 - 106955855 ACCCAGAAAATGACTTTTTCTCACAAAACTCATTATTCCAGGTGAATACAAACATTAAGAACAAACTTGTACAATTACAAAGCTGGTTATTCCAAAATTATGATTTGTAAAACCACAATGACTTGAACCCAC--AATTACAA i nomLeu3.chr10 C 0 I 1162 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=153953.000000 s hg38.chr19_GL949753v2_alt 303287 594 + 796479 tcaaagaaagactcaataaattcctgggcctccccacagtggagtcctgggcagctgtgggtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACGTGTAGTTGTGTAGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACGTTATCAACAGTTAACTTTATTTTACTCAGAACCAGAGAAAAATGGTATAGTGTTATGTCATTGtgtgtgtattttgtaatctattttttaaaatgaaagattaatcaatacctttaaaagtgggtagttgagagagagagagaaaacagtgcagaggagacagaataaagctagactgacatcattgtgtcttgtttcttgttttggtatagaaatataaacatACctttgggaggctgaggtgggcgaatcgcaagatcaggagttcaagaccagcctggccaacatggtgaaaccccacctctactgaaaataaaaagattagctgggcatggtggcacactcctgtcatcccagctactcgggaggctctgacaggagaattgcttgaacctgggaggtggagattgcagtgagctgagactgtgccactgcatt s panTro4.chr19 59259712 594 + 63644993 tcaaagaaagactcaataaattcctgtgcctccccacagtggagccctgggcagctgtgtgtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACGTGTAGTTTTATGGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACGTTATCAACAGTTAACTTTATTTTACTCAGAACCAGAGAAAAATGGTATCGTGTTATGTCATTGtgtgtgtattttgtaatctattttttaaaatgaaagattaatcaaaacctttaaaagtgggtagttgagagagagagaggaaacagtgcagaggagacagaataaagctagactgacatcattgtgtcttgtttcttgttttggtatagaaatataaacatACctttgggaggctgaagtgggcgaatcgcaagatcaggagttcaagaccagcctggccaacatggtgaaaccccacctctactgaaaataaaaaaattagctgggcatggtggcacactcatgtaatcccagctactcgggaggctctgacaggacaattgcttgaactcgggaggtggagattgcagtgagctgagactgcaccactgcatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56112770 589 + 60714840 tcaaagaaagactcaataaattcctgtgcctctccacagtggagccctgggcagctgtgggtgagatgaatgagTTATCTTGAAGGCTGACCTTCCAAGACACGTAGTTGTGTGGTTGGGGTGGCAGGGAGAAAAGAAAAAGAAAGATTCAGGACATCATCAACAG-----TTTATTTTACTCAGAACCAGAGAAAAATGGTATAGTGTTATGTCATTGTGTGTGTATTTTTTAATCTACTTTTAAAAATGAAAGATTAATCAAAACCTTTAAAAGTGGGTAGTTGAGAGAGAGAGAAAAAACAGTTCAGAGGAGACAGAATAAAGCTAGACTGACATCATTGCGTCTTGTTTCTTGTTTTGGTATAGAAATATAAACATATctttgggaggctgaagtgggcggatcacgagacaaggagttcaagaccagcctggccaacatggtgaaaccccacctctactaaaaataaaaaaattagctgggcatggtggcacactcctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgcagtgagctgagactgcaccactgcatt i ponAbe2.chr19 C 0 I 51 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102874880 1162 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=85623.000000 s hg38.chr19_GL949753v2_alt 303881 1001 + 796479 tgtagggaccagccccacagggtcggtgggtctctccctgtgtgtggtgacgatagagtgtagaaataaagacacaagacaaagagataaaagaaaaggcagctgcgcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgttgggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttacgccattatttctgcatatcagggactattagtactttcactaatttactactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagactcccttccccagtctgctaagtagcgggtgttgttccttgccacttacgctaccgctagaccacggtccgcttggcaacggacgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccctgtccgggcatgacagagggctcgcactcttgtcttctggtcacttctcactgtgtcccctcagctcctatctctgtatggcctggcttttcctaggttatgattacagagggaggattattataatattgggataaagggtaactgctacaaacaaatgattaatgatattcatatataatcataactaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggcacctgggtggcttgccac s panTro4.chr19 59260306 980 + 63644993 tgtagggaccagccccacagggtcggtgggtctctccctgtgtgtggtgacgagagagtgtagaaataaagacacaagacaaagagataaaagaaaaggcagctgggcccgggggaccactaccaccaatgcgtggagaccggtagtggccccgaatgtcgggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagcgtgtgagtcatctccaatgataggtaaggtcacgtgggtcacgagtccactggacagggggcccttccctgcctggcagccgaggcagagagagagaggagacagagagaaagacagcttacaccattatttctgcatatcagggactattagtactttcactaatttaccactgctatctagaaggcagagccaggtgtacaggatggaatatgaaggcggactaggagcgtgaccactgaagcacagcatcacagggagacggttaggcctccggataactgtgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaacctcccccagggaaagggagactccctttcccggtctgctaagtagcgggtgttgttccttgccacttacgctaccgctagaccacg------------------gtcttcccaaatactggcgtcaccgctagaccaaggagccctctggtggccctctctgggcataacagaaggctctcactcttgtcttctggtcacacctcac--tgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagt-attgctacaaactaatgattaatgatattcatatataatcatatctaagatctgtatctggtataactattcttgttttatattttcttatactggaacagcttgtgtcctctgtctcttgcctcggcacctgggtggcttgccgc i panTro4.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e ponAbe2.chr19 56113359 51 + 60714840 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102874880 1162 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=13130.000000 s hg38.chr19_GL949753v2_alt 304882 68 + 796479 ccacagcattctagcctgggcgac-gagcaagactccgtttaaa-------aatatatatatatacatatataaac s panTro4.chr19 59261286 65 + 63644993 ccacagcattctagcctgggcgac-gagcaagactccatttaaa----------aTATATATATATATATAAAAAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102876042 76 - 106955855 ccactgcattccagcctgggtgacagagcaaggctccattaaaaaaaaaaaaaaatatatatatatatatagaaac i nomLeu3.chr10 I 1162 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e ponAbe2.chr19 56113359 51 + 60714840 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=154862.000000 s hg38.chr19_GL949753v2_alt 304950 304 + 796479 --atattcctgaatgtctatactataaaatatttttaaatataacttataaatctaaagataataCCTTAAAAAAGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAAGAATTATTTGTACTAGAATGTAAGCAAAATTACTTGACCatatattttataatgcatatattatttatcatattatataataaatgtatacttttaaatcaaattatatattatgtagtgacatatagttaatattattatataattttgactatatataGTAAAACATAAGTGAATACACC s panTro4.chr19 59261351 301 + 63644993 --ATATTCTTGAATGTCTATACtataaaatatttttaaatataacttataaatCTAAAGATAATACCTTAAAAAGGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAAGAATTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgcatatattatttatcatattatataataaatgtatacttttaaatcaaattatatattatGTAGTGACATATAGTTAA---TATTATATAATTTTGACTATATATAGTAAAACATAAGTGAATACACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56113410 301 + 60714840 --ATATTCTTGAATGTCTATACtataaaatatttttaaatataaCTTACAAATCTAAAGATAACACCTTAAAAAAGGAAATAGAATTCAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAGGAGTTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgaatatattatttatcaaattatataataaatgtatactttttaatcaaattatatattatGTAGTGACATATAGTTAA---TATTATATAATTTTGACTATATATAGTAAAACATAAATGAATACACC i ponAbe2.chr19 I 51 C 0 s nomLeu3.chr10 102876118 302 - 106955855 atatattcttgaatgtctacactataaaatattttaaaatataacttataaatctaaAGATAATACCTTAGAAAAGGAAATAGAATTGAGTTCCTATCAAATTAGGGCATTACTAAACAAGGAGGAATTATTTGTACTAGAATGTAAGCAAAATTATTTGACCatatattttataatgcatata----ttatcatattatataataaatgcatactttttaatcaaattatatattatgtagtgacatatagttaatattattatataATTTTGACTACATATAGTAAAACATAAGTGAATACACC i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47333550 19545 + 51301725 T e macFas5.chr19 55224289 16998 + 59248254 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=667458.000000 s hg38.chr19_GL949753v2_alt 305254 728 + 796479 CTC-AAAAATGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCATcctagagaaatagctgactccacattcggagagaaaatacaggagatgaagtcagaacttcttatcatgcaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatatgttcaaagcctatcagtttaCTACTGTTAAAAACAAAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGGAAAAGAACAAAATCTCCACATCAAAAACGTGGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCGTTGAGTATACaagcaataaacatcaatggctgacaaaacccttaggctgaaggttgatagtgaatataataacgagtggatcctgctgatagtacAGCCATCAGTACAGAATTGCAAGGTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTGTCTCACTTCTGACATT s panTro4.chr19 59261652 728 + 63644993 CTC-AAAAATGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCATcctagagaaatagctgactccacattcggagagaaaatacaggagatgaagtcagaacttcttatcatgcaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatatgttcaaagcctatcagtttactactgttaaaaacaaAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGGAAAAGAACAAAATCTCCACATCAAAAACGTGGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACACAATAATAAGTACAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTCAACCCTGCAAAGCTTGGATAACCTATGCATTGAGTATACaagcaataaacatcaatggctgccaaaacccttaggctgaaggttgatagtgaatataataatgagtggatcctgctgatactacAGCCATCAGTACAGAATTGCAATGTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTGTCTCACTTCTGACATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56113711 728 + 60714840 CTCAAAAAATGTTTAATTCTTA-AAATATGTACGGTCAAAAATTCTAAA--TTTCATcctagagaaacagctgactccacatttagacagaaaatataggagatgaagtcggaacttcttatcatacaagaaagcaaagaCATCACCTCATACCATCAGATTcatgttacctgaacataaagtctatc--atgaaaagttcccaagggcgaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaatacgttcaaagcctatctgtttacaactgttaaaaacaaaattaaaaaacaaaaaaCCCCTCAAATATGAGGAATGGT-AAAGAACCAAATCCCCACATCAAAAACGTAGAAATGAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACATTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAATAGCTATAGTAATGTTTTTGCCTAAGAATAGCTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCATTGAGTATACAAGAAATAAACATCAATGGCTACCAAAACCCTTAGGCAGAAGGTTGATAGTGAATATAATAATGAGTGGATCCTGCTGATGGTACAGCCATCGGTACAGAGTGGCAATCTGGAGAATGCAAGACACAAGCAAATGAGCCATTGTCTCTCACTTCTGACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102876420 728 - 106955855 CTCAAAAAAAGTTTAATTCTTA-AAATATGTATGGTCAAAAATTCTAAA--TTTCAtcctagagaaatagctgactccacattcggacagaaaatacaggagatgaagtcagaacttcttatcacacaagaaagcaaagacatcaccacataccatcagattcatgttacctgaacataaagtctatc--atgaaaagttcccaatggcaaaatgtggaatatttatagaatcaaataatataggtagtgtattaaaactaatgaaTATGTTCAAAGCCTATCTGTTTACTACTGTTAAAAACAAAATTAAAAAACAAAAAACCCCTCAAATATGAGGAATGGT-AAAGAACCAAATTCCCACATCAAAAATGTGGAAATAAAGGCAAGAAGCAAGATCTCTTTTGTTTATCTGAAGTGTTACACAGGAAACACTC---TTTTCTGTAGAATGTTTCTACATAATAATAAGTATAGTAACAGCTATAGTAATGTTTTTGCCTAAGAATAACTGTAGAGTTTTTGCATAATAATAGTTAACCCTGCAAAGCTTGGATAACCTGTGCATTGAGTATACaagcaataaacatcaatggctgccaaaacccttaggctgaaggttgatagtgaatataataatgagtggatcctgctgaTGGTACAGCCATCGGTACAGAATTGCAATGTGGAGAATGCAAGACACAAGCAAATGCACCATTGTGTCTCACTTCTGACATT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55207291 664 + 59248254 ccC-AAAAATATTTAACATTGATAAATATATGTTGTCAGGATTTTAACTTTTTTTttcctgaagaaatggttgaagctaccttaggacagaaactataggagatgaactcagaaccccttattgttcaaaagagcaaaggagtcaccaagtaccctcagactcatgtgaccagaagaaaaagggttcccaatggaggattcttattggcaaagtgtgggacatttatagcatcaaataatatttgtaatggataaaa---aatgaatagatacaaactctatgtgtttaataccgctataaacaaaat---acaacatacaacacttcacatttgggatatggt-aaagaaccaaatcactacattgcaaagttgcaaatggaggcaagacccaagtgctctcttttctctatgaagtacttcacaggaaacattctttttctctgtagaat-tttccacctaataa------------------------------tgtcaaagagtggacata----------------------------------cttgggtaatctgtgtattgcgtgtataggcaataaagaccaatggctgccccaaccctgaggttacaggtcaatgctaaatataaaaatgggtggatccagttgaagatacAGCCATAGGGGCAGAATTGCAAAATGGAGAATGCAAGACACAAGCAAATGAGTTACTGTGTCTCAGTTCTGACATT i macFas5.chr19 T 16998 I 21040 s papAnu2.chr19 47314005 663 + 51301725 ccc-aaaaatatttaacattgataaatatatgttgtcaggattttaacattttttttcccgGAGAAATGGTTGAAGCTACCTTAGGACAGAAACTATAGGAGATGAACTCAGAACCCCTTATTGTTCAAAAGAGCAAAGGAGTCACCAAGTACCCTCAGACTCATGTGACCAGAAGAAAAAGGGTTCCCAATGGAGGATTCTTATTGGCAAAGTGTGGGACATTTATAGCatcaaataatatttgtaatgGATAAAA---AATGAATAGATACAAACTCTATGTGTTTAATACCGctataaacaaaat---acaacataCAACACTTCACATTTGGGATATGGT-AAAGAACCAAATCACTACATTGCAAAGCTGCAAATGGAGGCAAGACCCAAGTGCTCTCTTTTCTCTAAGAAGTACTTCACAGGAAACATTC-TTTTCTCTGTAGAAT-TTTCCACCTAATAA------------------------------TGTCAAAGAGTGGACATA----------------------------------CTTGGGTAATCTGTGTATTGCGTGTATAGGCAATAAAGACCAATGGCTGCCCCAACCCTGAGGTTGCAGGTCAATGCTAAATATAAAAATGGGTGGATCCAGTTGAAGATACAGCCATAGAGGCAGAATTGCAAAATGGAGAATGCAAGACACAAGCAAATGAGTTACTGTGTCTCAGTTctgacatt i papAnu2.chr19 T 19545 I 21315 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=21260.000000 s hg38.chr19_GL949753v2_alt 305982 41 + 796479 TTCTAAGCATCTTTTTCACCATACCCTCAAATCTAGACCGT s panTro4.chr19 59262380 41 + 63644993 TTCTAAGCATCTTTTTTACCATACTCTCAAATCTAGACCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56114439 41 + 60714840 TTCTAAGCATCTTTGTTACCATACCCTCAAATCTAGACCGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102877148 41 - 106955855 TTCTAAGCATCTTTGTTACCACACCCTCAAATCTAGACCGT i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47314668 21315 + 51301725 I e macFas5.chr19 55207955 21040 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=1206645.000000 s hg38.chr19_GL949753v2_alt 306023 989 + 796479 tatctggctgggcgtctctatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgactgatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttggtctattctgctgttaatgcttctcatcgtattatgaaattcgtgtcatgaatttttcagctcgagaagttcagtttgggtgtttcttaaaatttaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgaatttcaactttgctcttgatttgaatgaccttccttgccatccagattccaaattctacgtttgtcatttcagacaattcatactgattaagaacaatttctggggagctcg-----tggactggtttggagataataggagttatttccctgattttttttctcatctgggagggttgctattcctttcattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcaggggactaaggctctgtacagggtctttgc---tgaattcttgctcttggtt--ttccaggcggtagaatttagtaaagtgatttttggtgttgtagtgtggctgtaatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccactgcgtggtgcctttgtTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggTAGGT s panTro4.chr19 59262421 994 + 63644993 tatctggctgggcgtctctatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggactatgtcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgacggatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttggtctgttctgctgttaatgcttctcatcgtattatgaaattcgtgtcatgaatttttcagctcgagaagttcagtttgggtgtttcttaaaatttaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgaatttcaactttgctcttgatttgaatgaccttccttgccatccagattccaaattctacgtttctcatttcagacaattcatactgattaagaacaatttctggggagctcgtggactggactggtttggagataataggagttatttccctgattttttttctcatctgggaggtttgctattcctttcattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcaggggactaaggctctgtacagggtctttgc---tgaattcttgctcttggtt--ttccaggcgatagaatttagtaaagtgatttttggtgttgtagtgtggctgcgatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccgctgcgtcgtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggTAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56114480 988 + 60714840 tacctggctgggtgtctctgtgtttcttgtatttgtgagtcaaactctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatatcatatttctcagagattttgttcacttttaaaaatattttttccttatatttgactgatttgattcgaacaagtcttcaagctttgaaattcttttccccagtttggtctattctgctgttattgcttcgcatcgtattatgaaattcgtgtcatgaattttgcagctcaagaagttcagtttgggtctttcttaaagtttaatcgttcatgtcattaatcattttattggattgcttggcttccttggattgagtttcgactttgctcttgatttgaatgacctttcttgccatccagattccaaattctatgtttgtcatttcagacaattcatgccgattaagaaaaacttttggggagctcg-----tgggctggtttggagataataggagttatttccctga-ttttttcctcatctgggagggttgctattcctctcattgcaagagtagaaactgagtatagtctgttggctttgtttctggaagttttcagatgactaaggctctgtacagggtctttgttgatgaattcttgctcttggtt--ttccaggcgatagaatttagt--agtgatttttggtgttgtagtgtggctgcga-ccagtagatggcgcttgagagcaacaggcaatagacaggctcctactccactgcgtggtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgtttttgttttttgagacagggtctcactttgtcacccagggtggagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggtaggt i ponAbe2.chr19 C 0 I 1183 s nomLeu3.chr10 102877189 990 - 106955855 TATCTGGTTCAGCAtcactatgtttcttggatttgtgtgtcaaactctctagcgagtttaggaaaatattcatggaccatatcctc-aatatactttccaagttccttattctctcttcccctttcaggaatgctgacaagtcatacatttggtgtctttagataatgtcatatttctcagagattttgttcacttgtaaaaatattttttccttatatttgactgatttgattcaaacaagtcttcaagctttgaaattcttttcctcagcttgatctattctgctgttaatgcttctcatcgtattatgaaatttgtgtcatgaatttttcagctcaagtagttcagtttgggtctttcttaaaattgaatcgttcatgtcattaatcattttactggattgcttggcttccttggattgagtttcaactttgctcttgatttgaatgaccttcctttccatccagattccagattctacgtttgtcatttcagacaattcatactgattaagaacaatttctggggagctcg-----cgggctgatttggagataataggagttatttccctga-tttttttctcatctgggagggttgctattccttcgattgcaagggtataaattgagtatagtctgttggctttatttctggaagttttcagaggactaaggctctgtacagggtctttgttgatgaattcttgctgttggtt--ttccaggcggtagaatttgataaagtgatttttggtgttgtagtgtggctgcgatccagtagatggcgcttgagagcaataggcaatagacaggctcttactccactgcgtggtgcctttgCTTATCTTTGTTCTTGACCTTGATACTTTTGAAAAGGTCAGAGCAG-tttttttgttcttgttttttgagacagggtctcactctgtcacccagggtggagtgcagtggcacgctcttggatcactgcagcctcaaccttcccaggctcaggtaggt i nomLeu3.chr10 C 0 I 1169 s macFas5.chr19 55228995 970 + 59248254 tatctggctggacgtctctgtgtttcttggatttgtgtgtcaaa--ctctagcgagtttaggaaaatattcatggactatatcctcaaatatattttccaagttgcttattctctc-tcctctttcaggaatgctgacaagtcatatatttggtctctttagataatg---tatttctcagagattttgttcatttttaaaagtattttttctttatatttgactgatttgattcaaacaagtcttcaagctttgacattcttttcctcagcttggtctattctgctgttaatgcttctccacgtattatgaaattcgcgtcgtgaatttttcaactcaagtagttcagtttgggtctttcttaaaatttaatcgttcatgtcattaatcacgttactggattgcttgggttccttggattgagtttcaactttgttcttgatttgaatgaccttccttgcgatccagattccaaattctacgtttgtcatttgagacaattcatactgattaaggacaatttctggggagttcg-----tgggctggtttggagatactaggagtcatttccctga-tttttttctcatctgggagggttgctattcctttcattgcaagggtataagttgagtatagtctgttggctttatttctggaagttttcagacaactaaggcattga----------------tgaattcttgctcttggtttcttccaggcggtagaattgagt--agtgattcttggtgttgtcgtttggctgcgatccagtagacggcgcttgagagcaacaggcaacagacaggctcgcactccactacgtggtgcctttgCTGACCTTTGTTCTCGACCTTGATACTTTTGAAAAGGTCAGAGCCGttttttttgtttttgttttctgagacagggtctcactttgtcccccaggctgcagtgcagtggcacgatcttggatcactgcagcctcaaccttcccaggctcaggtgggt i macFas5.chr19 I 21040 C 0 s papAnu2.chr19 47335983 970 + 51301725 TATCTGGCTGGACGCCTCTGTGTTTCTTGGATTTGTGTGTCAAA--CTCGAGCGAGTTTAGGAAAATATTCATGGACTgtatcctcaaatatattttccaagttgcttattctctc-tcctctttcaggAATGCTGACAAGACATATATTTGGTCTCtttagataata---tatttctcagagattttgttcatttttaaaagtattttttctttatatttgactGCTTTGATTCAAACAAGTCTTCAAGCTTtgacattcttttcctcagcttggtctattctgctgttaatgctTCTCCACGTATGATGAAATTCGCGTCGTGAATTTTTCAACTCAAGTAGTTCAGTTTGGgtctttcttaaaatttaatcGTTCATGTCATTAATCACGTTACTGGATTGCTTGGGTTCCTTGGATTGAGTTTCAACTTTGTTCTTGATTTGAATGACCTTCCTTGCGATCCAGATTCCAAATTCTACGTTTGTCATTTGAGACAATTCATATTGATTAAGGACAATTTCTGGGGAGTTCG-----TGGGCTGGTTTGGAGATACTAGGAGTTatttccctga-tttttttctCACCTGGGAGGGTTGCTATTCCTTTCATTGCAAGGGTATAAGTTGAGTATAGTctgctggctttatttctggaagttTTCAGACAACAAAGGCATTGA----------------TGAATTCGTGCTCTTGGTTTCTTCCAGGCGGTAGAATTCAGT--AGTGGTTTTCGGTGTTGTCGTTTGGCTGCGATCCAGTAGATGGCGCCCGAGAGCAACAGGCAACAGATAGGCTCGCACTCCACTACGTGGTGCCTTTGCTGACCTTTGTTCTCGACCTTGATACTTTTGAAAAGGTCAGagccgttttttttgtttttgttttctgagacagggtctcactttgtcccccaggctgcagtgcagtggcacgatctcggatcactgcagcctcaaccttcccaggctcaggtgggt i papAnu2.chr19 I 21315 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=2865.000000 s hg38.chr19_GL949753v2_alt 307012 2 + 796479 GA s panTro4.chr19 59263415 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116651 2 + 60714840 gA i ponAbe2.chr19 I 1183 C 0 s nomLeu3.chr10 102879348 2 - 106955855 GA i nomLeu3.chr10 I 1169 C 0 s macFas5.chr19 55229965 2 + 59248254 ga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47336953 2 + 51301725 ga i papAnu2.chr19 C 0 I 630 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e rheMac3.chr19 60137520 5568 + 64156825 I a score=1000.000000 s hg38.chr19_GL949753v2_alt 307014 1 + 796479 C s panTro4.chr19 59263417 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116653 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102879350 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55229967 1 + 59248254 c i macFas5.chr19 C 0 I 629 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=541982.000000 s hg38.chr19_GL949753v2_alt 307015 1023 + 796479 AGAGCAGGCAAGTTAACTTAAGGCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGGGGCAAGTGTGGCATGGGCTCCAGACCCCGAGCACTGGAATTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCGGTTCTGCAAAGGAGAGGTGTAGCTGGGGTGGCGTGGGCAATGGTGGTGGCAGAGTTTGTGTGAAACTTGTCTCTTCCCCAATCACTGTcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcaattgctggtgagagccagttgtagcgctggcagtgggctttatgcttgacctttgttaaccagaagcattcaggtatcctaagtgatgggttgggttgtggaaaactcagtggtcttgatcagtactctgcctccaacgcagggaaatgaaggtaagtgtggctggtccaggcaagcctgtactcaggcccaatgctaggcacaggctccGTCCCCACAGAGGCTACATGTGTGGTTCTCAGGTCCCTGGAGAGACACTCAAGCACTGAGTAGGGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACGTTGGGTTCCAAGCCTAGAAAATGACAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACCGTCAAATCACATGCGGTTTGATGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTCTCAGGCTACAACTTTTCCCCCTCGGTTCTGTCAAAGAGAGGTGTCCAACGCCAGTGCTTGGTGTCTGGAGCCCATGCCACAATTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCGAAGTAGTGACCCTCACCCATGTTTGATGTCAAGttc--------tt s panTro4.chr19 59263418 1031 + 63644993 AGAGCAGGCAAGTGAACTTAAGGCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGGGGCAAGTGTGGCATGGGCTCCAGACACCGAGCACTGGAATTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCGGTTCTGCAAAGGAGAGGTgtagctggggtggcgtgggcaatggtggtggcagagtttgtgtgaagcttgtctcttccccactcaccgtcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcacttgctggtgagagccagttgtagcgctggcagtgggctttatgcttgacctttgttaaccggaagtattcaggtatcctaagtgatgggttgggttgtggaaaactcagtggtcttgatcagtactctgcctccagcgcagggaaatgaaggtaagtgtggctggtccaggcaagccagtactcaggcccaatgctaggcacaggctccgtccccacagaggctccatgtgtggttctcaggtccctggagaggcactgaagcactgagGAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACGTTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACCATCAAATCACATGCGGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTCTCAGGCTAAAACTTTTCCCACGCGGTTCTGCAAAAGAGAGTTGTCCAACGCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGTTTGATGTCAAGttctttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56116654 1020 + 60714840 AGAGCAGGCAAGTGAACTTAAGGCCTCCTCCTTGGCAATCTGGTCGCAAGTAGGGGACAGGTCCCCACAGACAGAACTGAGAGGCAAGTGTGGCATGGGTTCCAGACACCAAACACTGGAGTTAGACACCTCTCCTTTGCAGAAAAGTTTAGCCTTTCCTCAAGCAGTTCTGC-AAGGAGAGGTGTAGCTGGGGTCACGTGGGCAATGGTGGTGGCAGAGTTTGTGTgaagcttgtctcttccccaatcactgtcacttgtttcaggagacgttgtaatgtgctatatggtttgacctccaggccagtaggtggcacttgctggtgagagccagttgtagtgctggcagtgggctttatgtttgacctttgttaaccggaagtattcaggtatcctaagtaatgggttgggttgtggaaacctcagtggtcttgattagtgctctacctccaaggcagggaaatgaaggtaggtgtggctggtccaggcaagcctgtactcaggcccaatggtaggcaccagcTCTGTCCCCACAGGGGCTCCGTGTGCAGTTCTCAGTTCCCTGGAGAGACAATCAAGCACTGAGTAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCACATTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACCCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACAGTCAAATCACATGCGGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTACCTCCTGGGTAAAATCCATGCCTCTCAGGCTAAAACTTTTCCCATGCGGTTCTGCAAAAGAGAGGTGTCCAACTCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGTCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGCTTGATGTCAAGttc---------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102879351 1023 - 106955855 AGAGCAGGCAAGTGAACTTAAGTCCTCCTCCTTGGCAATCTGGTCTCAAGTAGGGGACAGATCCCCACAGACAGAACTGAGAGGCAAGTGTGGCATGGGCTCCAGACACCAAGCACTGGAGTTAGACACCTCTCCTTTGCAGAAAGGTTTAGCCTTTCCTCAAGCAGTTCTGCAAAGGAGAGGTgtagctggggtggcgtgggcaatggtggtggctgagtttgtgtgaagcttgtctctttcccaatcactgtcacttgtttcaggagacgttgtaatgtgctgtatggtttgacctccaggccagtaggtggcacttgctggtgagagccagctgtagcgctggcagtgggctttatgcttgacctttgttaaccggaagtattcaggtatcctaagtgatgggttgggttgtggaaacctcagtggtcttgatcagtgctctgcctccaaggcagggaaatgaaagtaggtgtggctggtccaggcaagcctgtactcaggcccaatggtaggcacaagctctgtccccacaggggttccgtgtggggttctcaggtccctggagagacactccggCACAGAGTAGAGCAATGACTATTATGCCAAAGTTACAGCAGAGTTCCCCAGAGGGGCATGTTGGGTTCCAAGCCTAGAAAATGGCAGTGGGACTCACTTTAATCTAATGCTCCCAACTCAGCAGAGCTCCTCCCTGTGGCCCAATGCTGGAAGCAATTTCAGACAGTCAAATCACATGCAGTTTGACGTCAGACCACTCAACTACCCCAGGCCACAGATCTTGCCTCCTGGGTAAAATCCATGCCTTTCAGGCTAAAACTTTTCCCACGCAGTTCTACCAAAGAGAGGTGTCCAACTCCAGTGCTTGGTGTCTGGAGCCCATGCCACACTTGCCTCTCAGTTCTGTCCATGGGGACCTGTCTTCTACTTGAGCCCAGATTGCCAATCTCTGGCCCAAGACTCTCCAAAGTAGTGACCCTCACCCATGCTTGATGTCAAGTTC--------TT i nomLeu3.chr10 C 0 I 1060 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=56791.000000 s hg38.chr19_GL949753v2_alt 308038 215 + 796479 ttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagcttcgcctcccaggttcgtgccattctcctgcctcagcctcccgagtagctgggactacaggcacccaccaccgtgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctt s panTro4.chr19 59264449 215 + 63644993 ttttttttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagcttcgcctcccaggttcgtgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56117674 212 + 60714840 ---tttttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggtgcaatctcggctcactgcaagctccgcctcctgggttcgtgccattctcctgcctcagcctctcgagtagctgggactacaggcacctgccactgcgcccggctaattttttgtatttttagtagaaacggggtttcaccgtgttagccaggatggtctt i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=11653.000000 s hg38.chr19_GL949753v2_alt 308253 134 + 796479 gaactcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaagcatgagccaccacgcccagctaattttttgtatttttagtagagacggggtttcaccgtgttagtcaggatggtctc s panTro4.chr19 59264664 134 + 63644993 gaactcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccgttttacccaggatggtctc i panTro4.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e ponAbe2.chr19 56117886 0 + 60714840 C e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=3928.000000 s hg38.chr19_GL949753v2_alt 308387 15 + 796479 gatctcctgacctcg s panTro4.chr19 59264798 15 + 63644993 gatctccggacctcg i panTro4.chr19 C 0 T 15417 s ponAbe2.chr19 56117886 15 + 60714840 gatctcctgacctcg i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I a score=70979.000000 s hg38.chr19_GL949753v2_alt 308402 817 + 796479 tgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccgggccGATGTCAAGTTCTTGCACTGCCCACTAAGGGTTAGgatcaggaatggcctctttctgtcagcatccaggtctgggagcacacatggagcacttccctgggcccttccttttcacagtcctcccgctgttccctaagtcagatccagggcttaggtcggtcaaagagctccccagtggcctggattgcctggctccccactgagaatgggtatcatgtggtctcataacttccctctcaggcactggaagttcactcatggttttctgccaggtcttgctgcatgagctgctgcctgccttctttttagcagtatctgagatttccttcactttcatattcaactcctgtattagtccattttcaggctgctgataaagacatacccgagaccaggtaatttataagaaaaagagatttaattgactcacagttccacatggctgcagaggcctcacaatcatggtggaaggtgaaagcaacatctcacgtggtggcaggtacagaggaaatgagag--ccaagcaaaaggggaaaccccttataaaatcatcagctcttctgagacttattcacgaccacaagaacagaatgggagaaactgcctccatgattcagttatctcccaccggctcccacagcacgtgggaattatgggagctacaattcaagatgagatttgggtggggacacagccaaaccatatcacctcccatgttctttcttggatacaagaatgcagaatgaatctctacaca s ponAbe2.chr19 56117901 817 + 60714840 tgatccacccgcctcggcctcccaaattgctgggattacaggcgtgagccaccatgcctggccAGTGTCAAGTTCTTGCACTCTCCACTAAGGGTTAGgatcaggaatggcctctttctatcagcatccaggtctgggagcacgcatggagcacttccctgggcccttccttttcacagtcctcccactgttccctaagtcagatccagcacttaggtcggtcaaagagctccccagtggcctggattgcctggctccccactgagaatgggtatcatgtggtctcataatttccctctcaggcgctggaagttcactcatggttttctgccaggccttgctgcatgagctgctgcctgccttctttttagca-tatctgagatttccttcactttcatattgaactcctgtattagtccgttttcaggctactgataaagacatacccgagactgggtaatttataagaaaaagaggtttaattgactcacagttccacatggctgcagaggcctcacaatcatggtggaaggtgaaagcaacatctcacatggtggcaggtaaagaggaaatgagagagccaagcaaaaggggaaactccttataaaatcatcagatcttgtgagacttattcacgaccacaagaacagtatgggagaaactgcctccatgattcagttatctcccaccggctcccacagcacatgggaattatgggagctacaattgaagatgagatttggatgaggacacagccaa-ccatatcacctcccacgttctttcttggatgcaagaatgcagaatgaatctctacaca i ponAbe2.chr19 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e nomLeu3.chr10 102880374 1060 - 106955855 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=138642.000000 s hg38.chr19_GL949753v2_alt 309219 546 + 796479 ccattttggtattttcaCCATCTCGGAAGACataacagtgtattatatccttaaaaatcactataaaagtagattttaagggttcttaccacacaaaaattagaaatatggaaagtaatgtatatgttaattagattgatttgcccaacagacaag--tatatatatttcaaaactacatactttacacaataagtatatacaatttAGGAAtttttcttttttctttttttttttgatggagtctcactctgtcaccaagctggagtgcactggtgcgatctcggctcactgcaatctccgcctcctgggttcaagcgattcccctgcctcagcctcccgagtagctgggactacaggcgtgcaccaccacgcccggctaattttttgtattttagtagagatggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccAAAGCTGTGTTATGAACATGAAGTTCTAAACACATTTTCTCATATGTTCACACATGTCTCATTCCAGCCTCAGTGCTCATGGGGTAGGATCT s ponAbe2.chr19 56118718 540 + 60714840 ccattttggtattttcaCCACCTCGGAAAACataacaatgtattatatccttaaaaatcgttataaaagtagattttaagggttcttaccacacaaaaattagaagtatgtaaagtaatgtatatgttaattagattgatttgcccaacagacaag--tatatatatttcaaaactacatactttacacaataagtatatacaatttAGGAAtttttctttttt----ttttttttgatggagtctcactctgtcgccaagctggagtgcactggtgcgatcttggctcactgcaatctcttcctcccgggttcaagcgattcccctgccttagcctcccaagtagctgggactacaggcacgcaccaccacgcctggctaattttttgtattttagtagagatggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccAAAGCTGTGTTGCGAACATGAAGTTCTAAACACATTTTCTTGTATGTTCACACAT--CTCATTCCAGCCTCAATGCTCATGGGGTAGGATCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881434 540 - 106955855 cCATTTTGGTATTTTCACCATCTCGGAGGACataacagtgtattatatccttaaaaatcactataaaagtagattttaagggttcttaccacacaaaaattggaagtatgtaaagtaatgtatatgttaattagattgatttgcccaacagacaagtatatatatatttcaaaactacatacttcacacaataagtataaataatttAGGAAtttttctt--------ttttttttgatggagtctcactctgtcaccaagctggaatgcactggtgcaatctcggctcactgcagtctccgcctcccaggttcaagcgattcccctgcctcagcctcctgagtagctgggactacaggcgcccatcaccacgcccggctaattttttgtattttagtagagacggggtttcaccatgttggccaggatggtctcgatctcctgaccttgcgatccgAAGCTGTGTTGTGAACATGAAGTTCTAAACACATTTTCTCATATGTTCACACATGTCTCATTCCAGCCTCAGTGCCCACGGGGTAGGATCT i nomLeu3.chr10 I 1060 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e calJac3.chr22 45524842 18403 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=3825.000000 s hg38.chr19_GL949753v2_alt 309765 8 + 796479 CCTTACCT s ponAbe2.chr19 56119258 8 + 60714840 CCTTACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881974 8 - 106955855 TCTTACCT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45543245 8 + 49145316 CCTCACCT i calJac3.chr22 I 18403 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 19731227 13895 - 122678785 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=223823.000000 s hg38.chr19_GL949753v2_alt 309773 435 + 796479 GAGACCACAAAC-CCTGGGGGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTACTCTATAAGACATAGCACCTGTAGGTCC---------------TCCCAGCATTCATGGAGAATTCAGCCT-GTACTGCTGAGCTTGGTACTTTGATATTAGACACAAAGGTA--GGGATCTGCTG-CTCCCTTCTTGGAAATAAGAAAAGTGTC--------------ACTGATGTAGCAGGACCATGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGCACCAACAGGGAATATCCCTCAGGCACCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTGAGCAGAGACCTTCCCAGGGCTTCTCTCTAGGACCCTCAGTCTCTCTGTCATTCACTGTTTCCTCTGAGTctcttcctctccctcccatccaccttgcccctctgtctctttccctct s ponAbe2.chr19 56119266 434 + 60714840 GAGACCACAAAC-CCTGGGAGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTGCTCCATAAGACATAGCACCTGTAGGTCC---------------TCCCAGAATTCATGGAGAATTCCACCT-GTACTGCTGAGCTTGGTACTTTGATATTAGACACAAAGGTA--GGGATCTGCTG-CTCCCTTCTTGGAAATAAGAAAAGTGTC--------------ACTGATGTAGCAGGACCGTGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGTACCAACAGGGAATATCCCTCAGGCAGCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTCAGCAGAGACCTTTCCAGGGCCTCTCTCTAGGACCCTCAGTCTCTCTGTCATTCACGGTTTCCTCTGAGTctcttcctctccctcccatcccccttgcccc-ctgcctctttccctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102881982 437 - 106955855 GAGACCACAAAC-CCTGGGGGTCCCTGGGGTGTGAAAACAGGTAGGGGGAGGTGTTCCATAAGACATAGCACCTGTAGGTCC---------------TCCCAGAATTCATGGAGAATTCCACCT-GTACTGCTGAGCTTGGCACTTTGATATTAGACACAAAGGTAGGGGGATCTGCTG-CTCCCTTCTCGGAAATAAGAAAAGTGTC--------------ACTGATGTAGCAAGACCATGTTCTTTCCTGAGGCCACCATGGAGCCCGGCTGCACCAACAGGGAATATCCCTCAGGCAGCTGTCCTAGAGAGAGGCAGGATGGGTGAGGGGCTGCCCCCACCTTGTTCTGAGCAGAGACCTTCCCAGGGCCTCTCTGTAGGACCCTCAGTGTCTCTGTCATTCACTGTTTCCTCTGAGTctcttcctctccctcccatcccccttgcccctctgcctctttccctct i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45543253 443 + 49145316 GAGACCACGAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCATAGCACCTGTAGGTTCCTGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTCCTTATGAGCTTGGTGCTTTGATTTCAGATACTGGGG----GTGATGGGCTG-CTCCCTCCTTGGTCAGAAGGAAAGTGTCCATCGGACTCTGTGACTGACACAGCAGGGTCACGTCCTCTCCTGAAGCCACCCTGGGGCCTGGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTGGAGAGAACAAGGATGGGTGAGGGGCTG-CCCTGCCTTGTTCTGAGCTGAGAACTCCCCA-GGCTTCTCTCTGGGACCCTCAGTCTCT------GTCTCTGTTT--TCTGAGTCTCCCCCT-TCCCACCGA------TTGC----CTGTCTCTCTCTCCCT i calJac3.chr22 C 0 I 26 s canFam3.chr1 102761694 390 + 122678785 GGGACCAGGAACTTCACAGGGACACTGGGCTATGACAACAGGTACAGGGAGGTGTTGAGTGAGCCATAGCACCTGTAGGTCCCCCCATGGGATGAGGTCACAGGACTCAAGGAGAATTCAGCC--ATACAGCCCAGCTCGGTACTTTGATCTAAGATGCAGAGG----GGGATCAGCTGCCCCCCTCCTTGGACAGTAGGAAAGTGTCCACAGAGCTC----AGTGACAAA--AGGGTCACATTCTCTCCTGGGGCCACCATAGGTCCTGGCTGCACCCAGAGGGAGGGTGTGTAGGGGAGCTGTCCTAGAGAGAGGAAGGGC-------------------CCTTGTTCTGATCTGAG------------------------------------TCTGT------CTGTGTCCTCTGAGTCTTTCCCATCCCCATCCC------CTGtctctctctctctctctgtct i canFam3.chr1 T 522 C 0 e mm10.chr7 3825908 29542 + 145441459 T e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=1146.000000 s hg38.chr19_GL949753v2_alt 310208 2 + 796479 cT s ponAbe2.chr19 56119700 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882419 2 - 106955855 cT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 102762084 2 + 122678785 ct i canFam3.chr1 C 0 I 147 e mm10.chr7 3825908 29542 + 145441459 T e calJac3.chr22 45543696 26 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=97702.000000 s hg38.chr19_GL949753v2_alt 310210 380 + 796479 AAAGAACCTTATCCATtgacatggtttgattgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacgtgttgtgggaggaacctggtgggagataattgaatcgtggag-gcggtgggtggtttcccccatactgttctcctggtagtaagtctcacgagatctgatggttttataaggggaaacccctttcacttggctctcatttc-tttcttgtctgccacc-------atgtgcctttcaccttccaccatgcttatgaggtctccccagccacatggaactgtgagtccattaaacctctttttctttataaatcacccagtcttggggatgtctttatcagcagcaagaaaacagactaatacaCTCAT s ponAbe2.chr19 56119702 386 + 60714840 AAAGAACCTTATCCATtgacatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacatgttgtgggaggaacctggtgggagataattgaatcatggagaggggtgggtggtttcccccatactgttctcctggtagtaagtctcacgagatctgatggttttataaggggaaacctctttcacttggctctcatttc---tcttgtctgccaccatgtaagatgtgccttttgccttccgccatgattgtgaggcctccccagccacatggaactgtgagtccattaaacctctttttctttataaatcacccagccttggggatgtctttatcagcagcatgaaaacagactactataCTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882421 389 - 106955855 AAAGAACCTTATCCATtgacatggtttggctgtgtccccacccaaatctcatcttgaattgtagctcccataattcccacatgttttgggaggaacctggtgggagataattgaatcatggaggggggtgggtggtttcccccatcctgttctcctggtagtaagtctcatgagatctgatggttttaaaaggggaaacccctttcacttggctctcattttccctctcgtctgccaccatgtaagatgtgccttttgccttccaccatgattgcgaggcctccccagccacgtggaactgtgagtccattaaacctctttttctttataaatcacccagccttggggatgtctttatcagcagcatgaaaacagactaatacaCTCAT i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3825908 29542 + 145441459 T e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45543696 26 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=5964.000000 s hg38.chr19_GL949753v2_alt 310590 11 + 796479 CATGCTGGTCA s ponAbe2.chr19 56120088 11 + 60714840 CATGCTGGTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882810 11 - 106955855 CATGCTGGTCA i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3796366 11 + 145441459 CATGCTGGCCA i mm10.chr7 T 29542 C 0 e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45543696 26 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=74652.000000 s hg38.chr19_GL949753v2_alt 310601 131 + 796479 TCACCGCCTGCAGATCCCCAGCAGGCCCTGTGCAGAATCTGGGTCCCTGAGTGAACCTGCTGGACCCCTCACCTGCAAT-AGCATATCCAGGGGATT-CAGGGGACCAAACAATCAGAAAAGACATTGTGggc s ponAbe2.chr19 56120099 131 + 60714840 TCACCACCTGCAGATCCCCAGCAGGCCCTGTGTAGAATCTGGGTCCCTGAGTGAACCTGCTGGACCCCTCACCTGCAAT-AGCATATCCAGGGGATC-CAGGGGACCAAACAATCAGAAAAGACATTGTGggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882821 132 - 106955855 TCACCACCTGCAGATCCCCAGCAGGCCCTGTGCAGAATCTGGGTCCCTGAGTGAGCCTGCTGGACCCCTCACCTGCAGTCAGCATATCCAGGGGATC-CAGGGGACCAAACAGTCAGAAAAGACATTGTGggc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45543722 132 + 49145316 TCACCACTTG-GGCTCCCTGGCAGGGCCTCTGCAGAGCCTGGGTCCCTGACTGAACTGGCTGGGCTCCTCACCTGAGATCAGGATATCCAGGGGGTCGCTGGGGGCCGACCACTTGGAGGAGAGGATGTGGGC i calJac3.chr22 I 26 I 5 s mm10.chr7 3796377 133 + 145441459 TAAGCTCCCCAGCCCCCCCATTAGAGCCTGAGCAGAGGCTAGGTTCCTGACTGAGTCTGTTGAGTTCCTCACCTGTGATCAGGATGTCCAGGGGGTCACTGGAGGCTGACCACTCAGAGGAAAGGTTGTGTGC i mm10.chr7 C 0 I 98075 e canFam3.chr1 102762086 147 + 122678785 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=74205.000000 s hg38.chr19_GL949753v2_alt 310732 327 + 796479 tcggtgcggtgactcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaagagttcaagaccaggctggccaacatggcaaaacccagtctctactaaaaatac-aaaaaaaaaaaaaaaaatttagccaggcatggtagtgtatgcctgtaatcccaggtacttgagaggctgaggcaggagaattacttgaacccaggaggtgaaggttgcagtgagctgagatcgtaccacgcactccagcctgggcaacaagagcgaaactccatctcaaaaaaacaaaaacaaaacaaaacaa---gaaaAGAAA s ponAbe2.chr19 56120230 323 + 60714840 tgggcgcagtgactcatgcctgtaatcccagcactttgggaggccgagg-gggtggatcacctgaggtcaggagttcaagaccaggctggctaacatggcaaaacccagtctctactaaaaatactaaaaaaaaaaaaaaaaaattagccaggcatggtagtgtatgcctgtaatcccaggtacttgggaggctgaggcaggagaattacttgaatccgggaggtggaggttgcagtgagctgagat-------cacactccagcctgggcaacaagagcgaaactccatctcaaaaaaaaaaaaaaaaaaagaaagaaaagaaaaagaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102882953 322 - 106955855 cgggcgcggtggctcacgcctgtaatcgcagcactttggaaggctgaggtgggtggatcacttgaggtcaggagttcaagaccaggctggccaacatggtgaaacccagtctctactaaaaatac-aaaaaaaaaaaaaaaa------ttaggcatggtagtgtacgcctgtaatcccaggtacttgggaggctgaggcaggagaattacttgagcccgggaggtggaggttgcagtgagctgagatcgcgccatgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaaaaaaagaaagaaaaagga--aaagaaaaa i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3796510 98075 + 145441459 I e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45543854 5 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=546.000000 s hg38.chr19_GL949753v2_alt 311059 1 + 796479 A s ponAbe2.chr19 56120553 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883275 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3894585 1 + 145441459 A i mm10.chr7 I 98075 C 0 e canFam3.chr1 102762086 147 + 122678785 I e calJac3.chr22 45543854 5 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=11644.000000 s hg38.chr19_GL949753v2_alt 311060 22 + 796479 GAAAAGACGTTGCGTTTAGCAC s ponAbe2.chr19 56120554 22 + 60714840 aaaaaGACGTTGCGTTTAGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883276 22 - 106955855 gaaaagaTGTTGCGTTTAGCAC i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3894586 22 + 145441459 GAGGAGAGGTTGTGTGCACCAT i mm10.chr7 C 0 C 0 s canFam3.chr1 102762233 22 + 122678785 GAGGAGAGGTTGTGTCCACCTT i canFam3.chr1 I 147 C 0 e calJac3.chr22 45543854 5 + 49145316 I e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=155861.000000 s hg38.chr19_GL949753v2_alt 311082 263 + 796479 AGCATCTGTCCTGGCTCCCATGGGAGCCACTC--------CAAGGAAACGTCAGCCTGACGGAGCCCAGCCTGGGGCTGCCAGCCATGGTGCCAG-GGTGGTCATGTCGCCTCTCCTCAGACAGGAAAAGTCCTTGGTGGCCAACATCAGAGCAACACTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTTTGGTCCCGTGCAGGGAG--------TCCTAGACACACCTAGAGGGAAAGACAAGTCAGGACTTTGGGGGCTGACTCCCC s ponAbe2.chr19 56120576 263 + 60714840 AGCATTTGTCCTGGCTCCCATAGGAGCCACTC--------CAAGGAAACGTCAGCCTGACAGAGCCCAGCCTGGGGCTGCCAGCCATGGTGCTGG-GGTGGTCATGTCCCCTCTCCGCAGACAGGAAAAGTCTCTGGTAGCCAACATCAGAGCAACACTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTTTGGTCCCGTGCAGGGAG--------TCCTAGACACACCTAGAGGGAAAAACAAGTCAGGACTTTGGGGGCTGGTTCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883298 251 - 106955855 GGCATCTGTCCTGGCTCCCATGGGAGCCACTC--------CAGGGAAACGTCAGCCTGACAGAACCCAGCTTGGGGCTGCCAGCCATGGTGCTGG-GGTGGTCATGTCCCCTCTCCACGGACAGGAAAAGTCCCTGGTAGCCAATATCAGAGCAACCCTGGAAGGTCAGACTCTCTCCAGAGATTAGGAGGGGCCCCTGTT------------GGGAG--------TCCTAGATGCACCTAGAGGGAAAGACATGTCAGGACTTTGGGGGCTGGTTCCCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45543859 270 + 49145316 AGCATCTGTACTGGCCCCCGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTGGGAGAGCCCAGCCTGGGTCTGCCGGCCAGGGCGCTGGAGGAGGTCAGGTCCCCAGTCCTTGTACAGAGTGAACCTGTCGTAGCCGACATCAGAGCCACACTGGAGGGTCAGCCTCTCCCCAGGGGCCACGACAGGACCCGGCT-------GCACTGAGAGTGATGGCTTCTCAGAAACACCT---GGGAAAGGTGGTCATGGTCTCCAGGAGCCGACCCTCA i calJac3.chr22 I 5 I 8 s mm10.chr7 3894608 273 + 145441459 AGCATCTGTATTGGCCTCCAGTGGAGCTACTCACATAGCCCAGTGTGAAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCCCCCCACCTTGTGCAGAGCAAATCTGTCATAGTTGATGTCAGAGTAACACTGCAGGGTGAGGGTCATTCCAGGGTCCAGGATATGGCCTTGGTGAGTCA---GCAGAGAG----GGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTAGAGACTGAGGTTTTATTCTTA i mm10.chr7 C 0 C 0 s canFam3.chr1 102762255 271 + 122678785 AGCATGTGTACCGGCCCCCATGGAAGGATCTCACTGGGCCCAGAGGGACATCTGCCCCAGATATCCCAGCCTGAAGCTGCCGGCCATGATGCTGAAGAAGGTCACGTGCCCT-TCCTTGGATAGAGCAAATCTGTCATACTGGACATCAGAAAGACACTGGAGGGTCAATCTCTGTCCAGAGGTCACAAAAGGGCCCTCCTGGGTCAGGAGCAAGGGC-------TTCCATGACACA-CTGGGGAGAAGATCAGCCATGGGTTGTAGGGGCTGATTCTTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47054537 19868 + 50890351 T e papAnu2.chr19 47336955 630 + 51301725 I e macFas5.chr19 55229968 629 + 59248254 I e rheMac3.chr19 60137520 5568 + 64156825 I e panTro4.chr19 59264813 15417 + 63644993 T a score=329283.000000 s hg38.chr19_GL949753v2_alt 311345 171 + 796479 TCAAATACATCCCTTGTCCTC----CTGGCTC---TGCAGATCTCACCATCACTTA-TACTCTGT-------GTCTCTGGC--CCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCA---CGCTTGGGACTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAAGAATGTTTGGGG--TAAAG s ponAbe2.chr19 56120839 173 + 60714840 TCAAATACAACCCTTGCCCTC--CTCTGGCTC---TGCAGATCTCACTGTCACTTA-CACTCTAT-------GTCTCTGGC--CCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCA---CACTTGGGATTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAATAATGTTTGGGG--TAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883549 173 - 106955855 TCAAATACATCCCTTGCCCTC--CTCTGGCTC---TGCAGATCTCACTGTCACTTA-TACTCTAT-------GTCTCTGGC--CCCAGAAGCCCTCGT--TCCCCTCATTCCACCCTCA---CACTTGGGGCTTGCCTGGGAGC-AAGATCCACAGCAACCTGTCTGATGCTTCAAAGAATGTTTGGGG--TAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143088 173 + 64156825 TCAAATACATCCCTTGTCCTC--CTCTGGCTC---TGCAGATCTCACCGTCACTTA-CACTCTAC-------GTCTCTGGC--CCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCA---CACTTGGGGCTTGCCTGGGAGT-GAGATGCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGG--TTAAG i rheMac3.chr19 I 5568 C 0 s macFas5.chr19 55230597 173 + 59248254 TCAAATACATCCCTTGTCCTC--CTCTGGCTC---TGCAGATCTCACCGTCACTTA-CACTCTAC-------GTCTCTGGC--CCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCA---CACTTGGGGCTTGCCTGGGAGT-GAGATGCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGG--TTAAG i macFas5.chr19 I 629 C 0 s papAnu2.chr19 47337585 173 + 51301725 TCAAATACATCCCTTGTCCTC--CTCTGGCTC---TGCAGATCTCACCGTCACTTA-CACTCTAT-------GTCTCTGGC--CCCAGAAGCCCTTGT--TCCCCTCATTCCACCCTCA---CACTTGGGGCTTGCCTGGGAGT-GAGATCCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGG--TTAAG i papAnu2.chr19 I 630 C 0 s chlSab2.chr6 47034669 173 + 50890351 TCAAATACATCCCTTGTCCTC--CTCTGGCTC---TGCAGATCTCACCGTCACTTA-CACTCTAC-------GTCTCTGGC--CCCAGAAGCCCTTGT--TCCCCTCCTTCCACCCTCA---GAGTTGGGGCTTGCCTGGGTGT-GAGATCCACAGCAACCTGTCTGATGCCTCAAAGAACGTTTGGGG--TTAAG i chlSab2.chr6 T 19868 C 0 s calJac3.chr22 45544137 142 + 49145316 ACAAAT-CCTCCCTTTCCC------------------CGGGCCTCACCACTGCTGATCTCCCTGT-------GTCTCTGG---CCCAGGAGCCCTGAG--CCCTCTTACCCCAACATCGTCCCACCTGGAGCTATCCTGAGACT-CGGCTCCTCC-CCACCTGCCCGGAGACTCA--------------------- i calJac3.chr22 I 8 C 0 s mm10.chr7 3894881 173 + 145441459 CCAAACA---CCTTTGCCCTCCCCTCTGGCCCTTGTGCATGTCCC-----CTCTTC-TCCCCAGTCAGGGCAGTGTTCGAG--AACACAGGCTCT------CCATTTAGTCCTTCTCTA-----CCTGCAACTCAGCAGAGGGG-CAGGCCTGTGGCAAAGGGCTTAGGGCCTCAGAAAATGTTTGGAGAATGATA i mm10.chr7 C 0 C 0 s canFam3.chr1 102762526 172 + 122678785 CCAAA--CTTCCATTTGCCTG--TCCTGACCC-----CAGGTCTCACTCTCTCTCA-CTCTCTCT-------GACCCTGGGGACCTGTGAGTCCTGGTGGTCCCCTCTCCCAACCCTCT---CATCTGATGATCCCCTAGGAGCAGAGATCCCT--TTACCTGTCTTTTGCTTCAAACTATGGATGGTA--AAAAA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59264813 15417 + 63644993 T a score=26607.000000 s hg38.chr19_GL949753v2_alt 311516 59 + 796479 ATGGGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTTGCTGAGGTCC--------------------------------------------------------------------GACCACACC s ponAbe2.chr19 56121012 127 + 60714840 ATGGGACTTCCTCACCTAAGAACAGGAGCTTCAGGGAGTCGCTGAGGTCCGACCACACCTGAAGGGTGTTGCGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGCTGAGTTCTGACCACACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883722 4 - 106955855 ATGG--------------------------------------------------------------------------------------------------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143261 59 + 64156825 ACGGGACTTCCTCACCTAAGAACAGGAGCCTCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GACCACACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55230770 59 + 59248254 ACAGGACTTCCTCACCTAAGAACAGGAGCCTCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337758 59 + 51301725 ACGGGACTTCCTCACCTAAGAACAGGAGCCCCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47034842 59 + 50890351 ACGGGACTTCCTCACCTAAGAACAGGAGCCCCAGGGAGTCCCTGGGTTCT--------------------------------------------------------------------GATCACACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544279 18 + 49145316 --GGGATCTCCA----------------------------------------------------------------------------------------------------------GACAATAC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3895054 7 + 145441459 GTGGG-----------------------------------------------------------------------------------------------------------------GA------- i mm10.chr7 C 0 C 0 s canFam3.chr1 19745122 59 - 122678785 ATCTGACTTCCTTATTTGAGACCAGCAGCTTAAAGGGGTCACTGGGGAAG--------------------------------------------------------------------GACCCCACC i canFam3.chr1 I 13895 T 12775 e panTro4.chr19 59264813 15417 + 63644993 T a score=14325.000000 s hg38.chr19_GL949753v2_alt 311575 10 + 796479 TGAAGGGTGT s ponAbe2.chr19 56121139 10 + 60714840 TGAAGGGTGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60143320 10 + 64156825 TGAAGGGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55230829 10 + 59248254 TGAAGGGTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337817 10 + 51301725 TGAAGGGTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47034901 10 + 50890351 TGAAGGGTGT i chlSab2.chr6 C 0 C 0 e mm10.chr7 3895061 0 + 145441459 C e canFam3.chr1 19745181 12775 - 122678785 T e calJac3.chr22 45544297 0 + 49145316 C e nomLeu3.chr10 102883726 0 - 106955855 C e panTro4.chr19 59264813 15417 + 63644993 T a score=189144.000000 s hg38.chr19_GL949753v2_alt 311585 78 + 796479 TCTGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGTTGAGTTCCGACCACACCTGAAGGGTGTTCCTGTTATT s ponAbe2.chr19 56121149 78 + 60714840 TCCGACTTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCGCTGAGTTCCGACCACACCTGAAGGGTGTTCCTGTTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883726 75 - 106955855 ---GACCTCCTCACCTGAGAACAGGAGCTTCAGGGAGTCACTGGGTTCCGACCACACCTGAAGGGTGTTCCTGTTGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143330 78 + 64156825 TCCGACTCCCTCACCTGAGAACAGGAGCCCCAGGGAGTCGCCGGGGTCTGACCGCACCTGAAGGGTGTTCCTGTTACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55230839 77 + 59248254 TCCGACTTCCTCACCTGAGAACAGGAGCCCCAGGGAGTTGCTGGGGTCCGACTGCACCTGAAGGGTGTTCCTG-TACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337827 78 + 51301725 TCCAACTTCCTCACCTGAGAACAGGAGCCCCAGGGAGTTGCCGGGGTCTGACCGCACCTGAAGGGTGTTCCTGTTACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47034911 78 + 50890351 TCCGACTTCCTCACCTGAGAACAGGAGCCTCAGGGAGTCGCTGGGGTCCGACCGCACCTGAAGGGTGTTCCTGTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544297 78 + 49145316 TATGAATTTCTCACCTGGGACCAGGAGCTCCAGGAGATCACTGGGTGAAGACCACACATAGGGAAAGCTTGAGTCATA i calJac3.chr22 C 0 C 0 s mm10.chr7 3895061 69 + 145441459 ---------CTTACCTGAGATGAGTATTTGTTGAAGAGCACTAGGTACTGACCACAGCTGTGGGGCATTCTTGTAGTA i mm10.chr7 C 0 C 0 s canFam3.chr1 102762698 78 + 122678785 TCAGACTTTCTCACCTGAGACAAGCAGCTCCAGGGGGCCACTGGAGACTGACCACACGTGGGGTGTGTGGCTGTAATA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59264813 15417 + 63644993 T a score=270069.000000 s hg38.chr19_GL949753v2_alt 311663 85 + 796479 GCCATGACATCTGAACATCCATCTGTGGCTGAGGGTCTTGGGGCCCACAGGAAACAGAGCTTGGGACTGTCCACTAGGGTGT---TGC- s panTro4.chr19 59249396 85 + 63644993 GCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTC---AGC- i panTro4.chr19 T 15417 I 95 s ponAbe2.chr19 56121227 83 + 60714840 GCCATGACATCTGAACATCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACA--GCTTGGGACTCTCCACTAGGGTGT---TGC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883801 83 - 106955855 GCCATGACATCTGAACATCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGAAACA--GCTTGGGACTGTCCACTAGGGTGT---TGC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143408 85 + 64156825 GCCATAGCATCTGAACACCCACCTGCGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCACTAGGGTGT---TGC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55230916 85 + 59248254 GCCATAGCATCTGAACACCCACCTGCGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCACTAGGGTGT---TGC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337905 85 + 51301725 GCCATAGCATCCGAACACCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCTACTAGGGTGT---TGC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47034989 85 + 50890351 GCCATAGCATCTGAACACCCACCTGTGGCTGAGGGTCATGGGGCCCACAGGGAACAGGGCTTGGGACTGTCCATTAGGGTGT---TGC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544375 85 + 49145316 ACCATAGCACCTGTACGTCCACCTGCGACTCGGGCTCACGGGGCCCACGGAGAAGATGGCCCGGGATGACCCAGGGGTACGG---GGC- i calJac3.chr22 C 0 C 0 s mm10.chr7 3895130 88 + 145441459 ACCATAACATCTGAATGTCCCTGTGTGGGTTGGGGTTGTGGGTCCTATAATAAACAGGGCTCGGTACTGTCTACTAGAAGATATATGC- i mm10.chr7 C 0 C 0 s canFam3.chr1 102762776 86 + 122678785 ACCATAGCATCTGAACTTCCAGGTGAGGCTGGGGGCTACCTGAACCACAGGTAATAGGGCCTGGACCCCCCCCAATGGGGGC---TCCC i canFam3.chr1 C 0 C 0 a score=224314.000000 s hg38.chr19_GL949753v2_alt 311748 90 + 796479 TGAGAGTCTAGGGTGCAGGAGAGACTGAGTTCT--CCTTCCTCGGTCAGAATGAATCTGTCCAGTTGCAGCCATGAGCCACGCTGGAGAGTC----- s ponAbe2.chr19 56121310 88 + 60714840 TGAGAGTCTAGGGTGCAGGAGAGAC--AGTTCT--CCTTCTTCAGTCAGAATGAATCTGTCCAATTGCAGCCGTGAGCCACACTGGAGGGTC----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883884 90 - 106955855 TGAGAGTCTAGGGTGCAGGAGAGACTGAGTTCT--CCTTCCTCAGCCAGAATGAATCTGTCCAATTGCAGCCATGTGCCACACTGGAGGGTC----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143493 90 + 64156825 TGAGAGTCTAGGGTGCAGGGGAGGCTGAGTTCT--CCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231001 90 + 59248254 TGAGAGTCTAGGGTGCAGGGGAGGCTGAGTTCT--CCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47337990 90 + 51301725 TGAGAGTCTAGGGTGCAGGAGAGACtgagttct--ccttcctcagtcagAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035074 90 + 50890351 TGAGAGTCTAGGGTGCAGGGGAGACTGAGTTCT--CCTTCCTCAGTCAGAATGAATCTGTCCAGTTGCAGCCGTGAGCCACACTGGAGGGTC----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544460 84 + 49145316 TGGGAGC------TGCATGGTGGGTGTTCATCT--TCTTCCTTACACAGAATGAAGCCATGAAATGGCAACTCTGAGCCACACTGGAGGGTC----- i calJac3.chr22 C 0 I 5 s mm10.chr7 3895218 87 + 145441459 TCTGTGTCCAGTGAGCTGGTGA-----ATTTCTTATCTTCCTTGGTGAGAATGAATTTATCGTAGTGAAAGTCTGAGGCACAGTGGAGTGTC----- i mm10.chr7 C 0 I 5 s canFam3.chr1 102762862 94 + 122678785 TGGGAGTCTAGGGTCCAGGAGGGCTGGCCTTCT--ACTTCCTTTATCAGGATGAACCTGTGGAATCCTGTCCATTA-CCACACTGGAGAGTCATGTC i canFam3.chr1 C 0 C 0 e panTro4.chr19 59249481 95 + 63644993 I a score=334653.000000 s hg38.chr19_GL949753v2_alt 311838 114 + 796479 CTCTCCTAAAGTTGCAACAGG-CTCAGGGGGGCTGAGAAGGTAGATTTTCTG------TAGAATCCTAGGAGAGAAGGAGGTAGTGTGATCCTTGAGGCTCAAGCCTC-CCACCTTATCCCT s panTro4.chr19 59249576 115 + 63644993 CTCTCCTGAGGTCACCACAGGGCTGGGCAGGGTTGAGAGGGTGGGTTTGTTG------TAGAATCCTAGGAGAGAAGGAGGCACCGTGTTAAATGGGGCTCACACCTC-CCGCGTCATCCCC i panTro4.chr19 I 95 I 15122 s ponAbe2.chr19 56121398 114 + 60714840 CTCTCCTAAAGTCACAACAGG-CTCAGGGGGGCTGAGAAGGTAGATTTGCTG------TAGAATCCTAGGAGAGAAGGAGGCAGTGTGATCACTGAGGCTCAAACCTC-CCACCTTATCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102883974 114 - 106955855 CTCTCCTGAAGTCGCAACAGG-CTCAGCGGGGCTGAGAAGGTAGATTTTCTG------TAGAATCCTAGGAGAGAAAGAGGCAGTGTGATCATTGAGGCTCAAGCCTC-CCACCTTATCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143583 113 + 64156825 CTCTCTTAAAGTCACAACAGG-CTC-GGGGGGCTGAGAAGGTAGATTGGCTG------TAGAATCCTAGGAGAGAAGGAGGCAGTGTGATCTCTGAGGCTCAAGCCTC-CCACCTTATCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231091 113 + 59248254 CTCTCTTAAAGTCACAACAGG-CTC-GGGGGGCTGAGAAGGTAGATTGGCTG------TAGAATCCTAGGAGAGAAGGAGGCAGTGTGATCTCTGAGGCTCAAGCCTC-CCACCTTATCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338080 114 + 51301725 CTCTCTTAAAGTCACAACAGG-CTCAGGGGGGCTGAGAAGGTAGATTGGCTG------TAGAATCCTAGGAGAGAAGGAGGCCGTGTCATCTCTGAGGCTCAAGCCTC-CCACCTTATCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035164 112 + 50890351 CTCTCTTAAACTCACAACAGG-CTC--AGGGGCTGAGAAGGTAGATTGGCTG------TAGAATCCTAGGAGAGAAGGAGGTGGTGTGATCTCTGAGGCTCAAGCCTC-CCACCTTATCCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544549 114 + 49145316 TCTTCCTGGGGTCACCACAGGGCTGGGCAGGGCTGAGAGGGTGGGTTTCCTG------TAGACTCCTAGGAGAAAAGGAGGCCCCGTGTTAAGTGGGGCTCACACCTC-CCACATCATCCC- i calJac3.chr22 I 5 C 0 s mm10.chr7 3895310 120 + 145441459 CCCTCCTGCTGTCACCACAGGGCTGGGCAGTACTGACAGCCTGGGTTCATAGTATTCATAGATTCCTAGGAGAGAAGGAAGCTGTCTCTTACATGC-TCTCACACCGT-CCCAGTGTTCTCT i mm10.chr7 I 5 C 0 s canFam3.chr1 102762956 115 + 122678785 CCCTCCTGAGGGCACGACAGGGCTGGGCAGGGCTGAGAGGCTGGGTTTGCCA------TGCAATCCTAGATGAGGGGGAGGGGCTGTGTTAAATGGGATTCAGATTGCTCCACATGATCCC- i canFam3.chr1 C 0 C 0 a score=686168.000000 s hg38.chr19_GL949753v2_alt 311952 237 + 796479 TAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTATCACCACCAGCTCCAGGGAGTCAGTGAGCTC-----------TGGGGCTGAAATAGTGACAGTAATATCATCCTACATATTCATTTGTCATGGATATGATGGGGGAACTCGGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTCTGTCCCAGGAC s ponAbe2.chr19 56121512 248 + 60714840 TAGGGCTGGGCTGTGAGGGAGAGACACCTCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGAGTCAGTGAGCTCTGACAAGCCATTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTCATGGATGTGATGGGGGAACTCAGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTCTGTCCCAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884088 248 - 106955855 TAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAAAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCTACCTGTCACCACTGACTCCAGGGAGTCAGTGCGCTCTGACAAGCCATTGGGGCTGAAATTGTGACAGTAATGTCATCCTACATATTCATTTGTCATGGATATGGTGGGGGAACTCGGCCTTGTCTCCAGGCTGCAGTGGGCTCTGTTGGTCCCAGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143696 247 + 64156825 TAGGGCTGGGCTGTGAGAGAGAGACGCCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCCGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTCAGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231204 247 + 59248254 TAGGGCTGGGCTGTGAGAGAGAGACGCCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGGGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTCAGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338194 247 + 51301725 TAGGGCTGGGCTGTGAGGGAGAGACACCCCTGAGAGCAGACCCCTTTCCTGAGGGCAGAGCCTGCGGCTGGGACCCCAAGGTGTCCTCCCACCTGTCACCACCAGCTCCAGGGGGTCAGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGACGTGATAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035276 247 + 50890351 TAGGGCTGGGCTGTGAGGGAGGGACACCCCTGAGAGCAGACGCCTTTCCTGAGGGCAGAGCCTTGGGCTGGGACCCCAAGGTGTCCTCGCACCTGTCACCACCAGCTCCAGGGGGTCAGTGAGCTCTGACAAGTCACTGGGGCTGAAATAGTGACAGTAATGTCATCCTACATATTCATTTGTTATGGATGTGTTAGGAGAACTCAGCC-TGTCTCCAGGCTGCACTGGGCTCTGTCTGTCCCAGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544663 245 + 49145316 -AGGGCTGGGCTGTGAGAGGGAGATGCCCCTGAGTGCAGAGCCCCTTCCTGAGGGCAGATCCTGGGGCTGGGACCCCTGAGTG-ACTCTCACCTGTCACCACCAGCTCCAGGGGATCACTGGGCTTGGACCAGCCAGAGTGGCTGTAATACTGACAGCGATACTGCCCTGCGTGTTGCCAGGCGATGGACTGGAT-GGGGAACTGGCCCTTCTTCACAAGCTCCCGTGGGATCCATGTAATCCAGGAT i calJac3.chr22 C 0 C 0 s mm10.chr7 3895430 226 + 145441459 ---TGCAATACTTTGTGGGA------------AGGGAAGAC-----TCCTAGGAGCAGAGCCTGGGGTTGAGAATCTGAC-TGTCCCCTCACCTGTCACCACCAGCTCCAGGGTGTCACTGGGCTGTGACCAACCAGCTGAGCTGTAACAATAACAGCGATATTGCCCTGCATGTTGTTGTGTCACAGAAGGGAT-GAAGAACTTGCCCTTGTTCCCAGGCTGCTGTAGGGTCTGTGTGCTCTGTGTT i mm10.chr7 C 0 C 0 s canFam3.chr1 102763071 242 + 122678785 CAGAACTGGGCTGTGAGGGAGACA---CCCGGGAACCAGACCCTCTTCCTGAGGGCAGAGCCTGGGGCTGGG--CCCTGTGTGGGCTCGCACCTGTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGTCAGTGGTGCTTTCATAGTAACAGTGATACCGTCCTGCATATACACCTGTAATGTGTGTGAT-GGAGAACTTGTCCTTGTCCTTGGACTCCAGTGCCTTCTGTCTGTCCCAGGTT i canFam3.chr1 C 0 C 0 e panTro4.chr19 59249691 15122 + 63644993 I a score=8435.000000 s hg38.chr19_GL949753v2_alt 312189 4 + 796479 ACTG s ponAbe2.chr19 56121760 4 + 60714840 ACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884336 4 - 106955855 ACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143943 4 + 64156825 ACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231451 4 + 59248254 ACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338441 4 + 51301725 ACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035523 4 + 50890351 ACTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544908 4 + 49145316 GCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3895656 4 + 145441459 TTTT i mm10.chr7 C 0 C 0 e canFam3.chr1 102763313 0 + 122678785 C e panTro4.chr19 59249691 15122 + 63644993 I a score=4847.000000 s hg38.chr19_GL949753v2_alt 312193 5 + 796479 A-GCTT s ponAbe2.chr19 56121764 5 + 60714840 G-GCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884340 5 - 106955855 A-GCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143947 5 + 64156825 G-GCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231455 5 + 59248254 G-GCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338445 5 + 51301725 g-gctt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035527 5 + 50890351 G-GCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544912 5 + 49145316 ATGCT- i calJac3.chr22 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e panTro4.chr19 59249691 15122 + 63644993 I a score=3942.000000 s hg38.chr19_GL949753v2_alt 312198 3 + 796479 CCC s ponAbe2.chr19 56121769 3 + 60714840 CCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60143952 3 + 64156825 CCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231460 3 + 59248254 CCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338450 3 + 51301725 ccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035532 3 + 50890351 CCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544917 3 + 49145316 TTT i calJac3.chr22 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e nomLeu3.chr10 102884345 0 - 106955855 C e panTro4.chr19 59249691 15122 + 63644993 I a score=4628.000000 s hg38.chr19_GL949753v2_alt 312201 4 + 796479 TCtt s ponAbe2.chr19 56121772 4 + 60714840 TCtt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60143955 4 + 64156825 TCtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231463 4 + 59248254 tctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338453 4 + 51301725 tcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035535 4 + 50890351 TCCt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e panTro4.chr19 59249691 15122 + 63644993 I a score=16878.000000 s hg38.chr19_GL949753v2_alt 312205 26 + 796479 ttttttttttttttcttttttttttt s rheMac3.chr19 60143959 26 + 64156825 tttttttttttaattttatgttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231467 26 + 59248254 tttttttttttaattttatgttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338457 26 + 51301725 tttttttttttttttttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47035539 26 + 50890351 tttttttttttttttttttttttttt i chlSab2.chr6 C 0 I 20546 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e panTro4.chr19 59249691 15122 + 63644993 I a score=-1780.000000 s hg38.chr19_GL949753v2_alt 312231 1 + 796479 --g s papAnu2.chr19 47338483 1 + 51301725 -a- i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47056111 1 + 50890351 t-- i chlSab2.chr6 I 20546 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143985 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=846.000000 s hg38.chr19_GL949753v2_alt 312232 3 + 796479 aga s rheMac3.chr19 60143985 3 + 64156825 aga i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47056112 3 + 50890351 aga i chlSab2.chr6 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e panTro4.chr19 59249691 15122 + 63644993 I a score=6563.000000 s hg38.chr19_GL949753v2_alt 312235 108 + 796479 cggagtcttgctctgtcacccaggctgcagtgcagcggcgtgatctgggctcactgcaagctccgcctcctgggttcacgccattctcctgccacagcctcccgagta s chlSab2.chr6 47056115 107 + 50890351 cgaagtcttgctctgtta-ccaggctggagtgcagtgtctcaatctcggctcagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagta i chlSab2.chr6 C 0 T 10034 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=0.000000 s hg38.chr19_GL949753v2_alt 312343 169 + 796479 gctgggactacaggcgcccaccaccacacccacctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccacgcccagcc e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e nomLeu3.chr10 102884345 0 - 106955855 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=491.000000 s hg38.chr19_GL949753v2_alt 312512 5 + 796479 CCCTC s nomLeu3.chr10 102884345 5 - 106955855 CCCTC i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e ponAbe2.chr19 56121776 0 + 60714840 C e calJac3.chr22 45544920 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=2047.000000 s hg38.chr19_GL949753v2_alt 312517 9 + 796479 ttttttttt s ponAbe2.chr19 56121776 9 + 60714840 ttttttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884350 9 - 106955855 ttttttttg i nomLeu3.chr10 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e papAnu2.chr19 47338484 7 + 51301725 I e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=546.000000 s hg38.chr19_GL949753v2_alt 312526 1 + 796479 t s ponAbe2.chr19 56121785 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884359 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47338491 1 + 51301725 t i papAnu2.chr19 I 7 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e macFas5.chr19 55231493 0 + 59248254 C e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=1964.000000 s hg38.chr19_GL949753v2_alt 312527 3 + 796479 agt s ponAbe2.chr19 56121786 3 + 60714840 aga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884360 3 - 106955855 aga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55231493 3 + 59248254 aga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338492 3 + 51301725 aga i papAnu2.chr19 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e rheMac3.chr19 60143988 0 + 64156825 C e panTro4.chr19 59249691 15122 + 63644993 I a score=228187.000000 s hg38.chr19_GL949753v2_alt 312530 181 + 796479 tggagtcttgctctgtcaccaggctggagtgtagtggcacagtctcagctcactgcaagctccgcctcccgggttcaagtgattctcccacctcagcctcccaagtagctgggactacaggtgcacaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt s ponAbe2.chr19 56121789 181 + 60714840 tggagtcttcctctgtcaccaggctggagtgcactggcacaatctcagctcattgcaacttccgcctcccgggttcaagtgattctcccgcctcagcctcccaagtagctgggactacaggtgcacaccaccacacccagctattttttgtatttttagtagagatggggtttcaccatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884363 181 - 106955855 tggagtctcactctgtcaccaagctggagtgtagtggcacaatctcggctcactgcaagctccgcctcccggattcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgcctgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60143988 181 + 64156825 tggagtcttgctctgtcagtaggctagagtgcagtggcacaatctcggcccagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggcacccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231496 181 + 59248254 tggagtcttgctctgtcaccaggctagagtgcagtggcacaatctcggctcagtgaaacttccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338495 181 + 51301725 tggagtcttgctctgttaccaggctggagtgcagtggcacaatctcggctcagtgaaacttccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacacccagctaatttttgtatttttagtagagacggggtttcaccatgt i papAnu2.chr19 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e chlSab2.chr6 47056222 10034 + 50890351 T e panTro4.chr19 59249691 15122 + 63644993 I a score=55586.000000 s hg38.chr19_GL949753v2_alt 312711 31 + 796479 tggccaggatggtctcgatctcttgacctca s ponAbe2.chr19 56121970 31 + 60714840 tggccaggatggtctcgatctcttgacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884544 31 - 106955855 tggccaggatgttctccatctcttgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144169 31 + 64156825 tggccaggctgctctcgatctcttgacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231677 31 + 59248254 tggccaggctggtctcgatctcttgacctca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338676 31 + 51301725 tggccaggctggtctcgatctcttgacctca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046188 31 + 50890351 tggccaggctggtcttgatctcttgacctca i chlSab2.chr6 T 10034 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C e panTro4.chr19 59249691 15122 + 63644993 I a score=146700.000000 s hg38.chr19_GL949753v2_alt 312742 62 + 796479 tgatctgcctgccttggcctctcaaagtgctgggattacaggcatgagccaccgcgaccggc s panTro4.chr19 59264813 62 + 63644993 tgatctgcctgccttggcctctcaaagtgctgggattacaggcgtgaaccaccgcgaccggc i panTro4.chr19 I 15122 C 0 s ponAbe2.chr19 56122001 62 + 60714840 tgatccgcccgccttggcctctcaaagtgctgggattacaggtgtgagccaccgcgcccagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884575 62 - 106955855 tgatccacccgccttggcctcccaaagtgctgggattacaggggtgagccaccgcgcccggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144200 62 + 64156825 tgatccgcccgctttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231708 62 + 59248254 tgatccgcccgctttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338707 62 + 51301725 tgatccgcctgccttagcctctcaaagtgctgggattacaggtgtgagccaccgcacccggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046219 62 + 50890351 tgatccgcccaccttggcctctcaaagtgctgggattacaggcgtgagccactgcacctggc i chlSab2.chr6 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e canFam3.chr1 102763313 0 + 122678785 C e calJac3.chr22 45544920 0 + 49145316 C a score=14076.000000 s hg38.chr19_GL949753v2_alt 312804 4 + 796479 cCTG s panTro4.chr19 59264875 4 + 63644993 cCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122063 4 + 60714840 cCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884637 4 - 106955855 cCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144262 4 + 64156825 cCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231770 4 + 59248254 cCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338769 4 + 51301725 cctG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046281 4 + 50890351 cCTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102763313 4 + 122678785 CCTG i canFam3.chr1 C 0 C 0 e mm10.chr7 3895660 0 + 145441459 C e calJac3.chr22 45544920 0 + 49145316 C a score=27450.000000 s hg38.chr19_GL949753v2_alt 312808 8 + 796479 GGCTTCCC s panTro4.chr19 59264879 8 + 63644993 GGCTTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122067 8 + 60714840 GGCTTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884641 8 - 106955855 GGCTTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144266 8 + 64156825 GGCTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231774 8 + 59248254 GGCTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338773 8 + 51301725 GGCTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046285 8 + 50890351 GGCTTCCC i chlSab2.chr6 C 0 C 0 s mm10.chr7 3895660 8 + 145441459 GGCTTTTC i mm10.chr7 C 0 C 0 s canFam3.chr1 102763317 8 + 122678785 AGTGTCCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45544920 0 + 49145316 C a score=465105.000000 s hg38.chr19_GL949753v2_alt 312816 135 + 796479 TCTTTATCCAATCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAG s panTro4.chr19 59264887 135 + 63644993 TCTTTATCCAATCAGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122075 133 + 60714840 TC--TATCCAGTCGGTATTCCTGGGTCTCCAGGTTCCCCTGACACCAGAGGGTCACAGGCCTCTCCTAGGTGATCACAGAGCCTGTCTCAACCCGTGGGGAGGGTTTGGGAAAGGG-----CCCTGAAATGGAACCAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884649 134 - 106955855 TT-TTATCCAGTTGGTACTCCTGGGCTTCCAGGTACCCCTGACACCAGAGGGTCACAGGCCTCTCCCGGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGG-----CCCTGAAATGGAACCAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144274 138 + 64156825 TCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231782 138 + 59248254 TCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338781 138 + 51301725 TCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTGACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAATGGAACCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046293 138 + 50890351 TCTTTATCCAGTCGGTACTCCTGGGCCTCCAGGTTCCCCTCACACCAGACA--CACAGGCCTCTCCCAGGTGATCACAGAGCCTGTCTCAGCCCATGGGGAGGGTTTGGGGAAGGAATGGTTCCTGAAACGGAACCAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45544920 135 + 49145316 TCTTTATATAGATGATACTCCTGGGCTTCCTGGTCCCCCTGACACCTGAGGGTCACAGGACTCCCCTGGGTGACCACAGAGCTTGGCTCAGCCCAGAGGGTGGGTGTGGGGAGGGT-----CCCTGGCAGGAAATCAGAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3895668 135 + 145441459 TCATTATGCAGAAAATATACTTCTGCATCCAGGTTCCCCTGACACCAGATGGTCATTGCTCTTTTGGAGGTGATCACAGATCCTGGTTCAGCCTTGATGGTTGGTTTTTGGAGATT-----ACCTACATAGAAGTCAGAG i mm10.chr7 C 0 I 1920 s canFam3.chr1 102763325 132 + 122678785 TCTTTATGGAGGTGGCACTCCTGGGCCTTCAGGCTCCCCTTACAACAGATGGTTGCAGGTGTCTTCAAGGGGATCACAGAGCCTGGCTTAGTCCAGATGGTGGGTGTGGGGAGGGT-----CCCTGGAA-GGAAACAG-- i canFam3.chr1 C 0 C 0 a score=94197.000000 s hg38.chr19_GL949753v2_alt 312951 36 + 796479 GCTGGGTCCCAAGATCTCTTTCACTCCTGGTTC-------TCT s panTro4.chr19 59265022 36 + 63644993 GCTGGGTCCCAAGATCTCTTTCACTCCTGGTTC-------TCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122208 36 + 60714840 GGTGGGTCCCAAGATCTCTTTCACTCCTGGTTC-------TCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884783 36 - 106955855 GCTGGGTCCCAAGATCTCTTTCACTCCTGGTTC-------TCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144412 36 + 64156825 ACTGGATCCCAAGATCTCTTTCACTCCCGGTCC-------TCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231920 36 + 59248254 ACTGGATCCCAAGATCTCTTTCACTCCCGGTCC-------TCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338919 36 + 51301725 ACTGGATCCCAAGATCTCTTTCACTCCCGGTTC-------TCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046431 36 + 50890351 ACTGGATCCCAAGATCTCTTTCACTCCTGGTCC-------TCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545055 40 + 49145316 GTCAGATTCTAAG---TCATTTACACCCAACCCAACAGATTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102763457 35 + 122678785 GCTGGGTCACAAGACCCTCCCCACCTTCAGTTC-------CC- i canFam3.chr1 C 0 C 0 e mm10.chr7 3895803 1920 + 145441459 I a score=149737.000000 s hg38.chr19_GL949753v2_alt 312987 52 + 796479 AG--TTTAGTCCAAAACCCC-TCTCTGTTTTATCACCCTCAG----CCCAGAACAACTG s panTro4.chr19 59265058 52 + 63644993 AG--TTTAGTCCAAAACCCC-TCTCTGTTTTATCACCCTCAG----CCCAGAACAACTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122244 52 + 60714840 AG--CTTAGTCCAAAATCCC-TCTCTGTTTTGTCACCCTCAG----CCCAGAATGACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884819 52 - 106955855 AG--CTTAGTCCAAAACTCC-TCTCTGTTTTATCACCCTCAG----CCCAGAACGACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144448 52 + 64156825 AG--CTTAGTCCAAAACCCC-TCTCTGTTTTATCACCCTCAG----CCCAGAACGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55231956 52 + 59248254 AG--CTTAGTCCAAAACCCC-TCTCTGTTTTATCACCCTCAG----CCCAGAACGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47338955 52 + 51301725 AG--CTTAGTCCAAAACCCA-TCTCTGTTTTATCACCCTCAG----CCCAGAACGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046467 52 + 50890351 AG--CTTAGTCCAAAACCCC-TCTCTGTTTTATCACCCTCAG----GCCAGAAAGACTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545095 52 + 49145316 AGCTCTCAGTCAAGGACCCT-CCAGACCCCCATCA--GTCAG----CCCAGAACTGCTG i calJac3.chr22 C 0 C 0 s mm10.chr7 3897723 57 + 145441459 AT--TGCAGTCCTTAACCCCATGACCTTTCTGCCACCCACAGGACTCACACACAGGTGG i mm10.chr7 I 1920 C 0 s canFam3.chr1 102763492 52 + 122678785 AG--CTCAGCCCCAAACCCC-CAGGTGCCCCGCCTCTGTCAG----CCCAGAGCTGTTG i canFam3.chr1 C 0 n 0 a score=18043.000000 s hg38.chr19_GL949753v2_alt 313039 8 + 796479 TG-CCCCCC s panTro4.chr19 59265110 8 + 63644993 TG-CCCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122296 8 + 60714840 TG-CCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884871 8 - 106955855 TG-CCCCCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144500 8 + 64156825 TG-CCCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232008 9 + 59248254 TGCCCCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339007 9 + 51301725 TGccccccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046519 8 + 50890351 TG-CCCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45545147 8 + 49145316 TT-CCCCTC i calJac3.chr22 C 0 T 2854 s mm10.chr7 3897780 8 + 145441459 TG-TTTTCC i mm10.chr7 C 0 C 0 e canFam3.chr1 102763544 0 + 122678785 I a score=41575.000000 s hg38.chr19_GL949753v2_alt 313047 16 + 796479 AA-CCTGAGAGCCCAGG s panTro4.chr19 59265118 16 + 63644993 AA-CCTGAGAGCCCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122304 17 + 60714840 AACCCTGAGATCCCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884879 17 - 106955855 AACCCCGAGAGCCCAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144508 17 + 64156825 AACCCCGAGAGCCCAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232017 17 + 59248254 AACCCTGAGAGCCCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339016 17 + 51301725 AACCCTGAGAGCCCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046527 17 + 50890351 AACCCCGAGAGCCCAGG i chlSab2.chr6 C 0 C 0 s mm10.chr7 3897788 16 + 145441459 -ACCATCACAGCCCAGG i mm10.chr7 C 0 N 0 e canFam3.chr1 102763544 0 + 122678785 I e calJac3.chr22 45545155 2854 + 49145316 T a score=480632.000000 s hg38.chr19_GL949753v2_alt 313063 195 + 796479 GGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACACCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGACAGACACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTA s panTro4.chr19 59265134 195 + 63644993 GGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCGCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACACCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGACAGACACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122321 195 + 60714840 GGCTGGAGTAAGAGGGAGGCTCGTGGGGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACAAACATCGTGTTGCCTGCTCTAGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAGGACAGAGAGACACACAGATGTGGTCACTCAGAGCCTGCTGCTACCCGTCCAGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102884896 195 - 106955855 GGCTGGAGTAAGAGGGAGGCTCGTGGGGAACGTGGTAGCCCCTTCTTCCTCCAACACTGACTGAGGCAGAGAAGTACTAACATCGTGTTGCCTGCTGTAGCGTCTCCAGCTGTCGGAGAGGAGACCACAGGGCCCTCCAGGACAGAGAGACACATGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144525 195 + 64156825 GGCTGGAGTAAGAGAGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCATCCAGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232034 195 + 59248254 GGCTGGAGTAAGAGAGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCCCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACACGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339033 194 + 51301725 GGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTCGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACAAACAT-GTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCATAGGGCCCTCCAAGACAGAGAGATACACGGATGTCGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47046544 195 + 50890351 GGCTGGAGTAAGAGGGAGGCTCGTGGAGAACCTGGTAGCCCCTTCTCCCTCCATCACTGACTGAGGCAGAGAAGCACGAACATCGTGATGCCTGCTCTGGGGGCTCCAGCTGTGGGAGAGGAGACCACAGGGCCCTCCAAGACAGAGAGATACATGGATGTGGTCACTCAGAGCCTGCTGCTGCCCGTCCAGGTC i chlSab2.chr6 C 0 T 24924 e canFam3.chr1 102763544 0 + 122678785 I e calJac3.chr22 45545155 2854 + 49145316 T a score=263319.000000 s hg38.chr19_GL949753v2_alt 313258 110 + 796479 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTTCCCTGGGTGGGGG-------AGCTCAGGAGGACCCCAGACTCTCTGGACACATGAGC s panTro4.chr19 59265329 110 + 63644993 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGACCTGGCTCTGGTTTTCCCTGGGTGGGGG-------AGCTCAGGAGGACCCCAGACTCTCTGGACACATGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122516 110 + 60714840 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTTCCCTGGGTGTAGG-------GGCTCAGGAGGACCCCAGGCTCTCTGGACACATGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885091 109 - 106955855 CCCACAGCTGTGGACCCACAGG-AGGGAAACTGCTTTTCCCTGGGTCTGGCTCTGGTTCTCCCTGGGTGGGGG-------GGTTCAGGAGGACCCCAGACTCTCTGGACACATGAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144720 117 + 64156825 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCTCTGGGTTTGGCTCTGGTTTTCCCTGGGTGGGGAGGGGGATGGCTTGGGAGGACCCCAGACCCTCTGGACACATGAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232229 117 + 59248254 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCTCTGGGTTTGGCTCTGGTTTTCCCTGGGTGGGGAGGGGGATGGCTTGGGAGGACCCCAGACCCTCTGGACACATGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339227 117 + 51301725 CCCACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCCTGGCTCTGGTTTtccctgggtggggaggggggtggcTTGGGAGGACCCCAGACCCTCTGGACACATGAgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47021815 117 + 50890351 cccACAGCTGTGGACCCACAGGAAGGGAAACTGCTTTTCCCTGGGCTTGGCTCTGTTTTTCCCTGGGTGGGGGGTGGGGGGGCTCGGGAGGACCCCAGACCCTCTGGACACATGAAC i chlSab2.chr6 T 24924 C 0 e canFam3.chr1 102763544 0 + 122678785 I e calJac3.chr22 45545155 2854 + 49145316 T a score=871314.000000 s hg38.chr19_GL949753v2_alt 313368 310 + 796479 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTGTGGAATCGGGT-CTGGGAGT-TTCCCTGGGAGGCCTCCTCTCCCAGGAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctctcctttacacttggagaaactgaggcccaggcagaggaggggcctgtccacatcaccacctccagaggagcctcaaaccgatgacagaactcagcccttccTCCCCTGGACCCCGCCCACCTCCCACTCAAAGCCCCTCACTTAGCA s panTro4.chr19 59265439 310 + 63644993 CTCTGCTCCCCTCCCCTGCCCCAGGTCACT------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTGTGGAATCGGGT-CTGGGAGG-TTCCCTGGGAGGCCTCCTCTCCCAGGACGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctctcctttacacttggagaaactgaggcccaggcaggggaggggcctgtccaCATCACCATCACCAGAGGAGCCTCAAACCGATGACAGAACTCAGCCCTTCCTCCCCTGGACCCCGCCCACCTCCCACTCAAAGCCCCTCACTCAGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122626 311 + 60714840 CTCTGCTCCCCTCCCCTGCTCCAGGTCACT------GTCTCTGCTGCAGGTGGGACAGGACAGGCCCCTATGGAATCGGGT-CTGGGAGGCTTCCCTGGGAGGTCTCCTCTCCTAGGAGGTCACAGCTGGGAgtcagagctgaaaggaactttcccaccc-ggaggcctctcacctttacacttggagaaactgaggcccaggcaggggaggggcctctccacgtcaccatcaccagaggagcctcaaaccggtgacagaactcagcccttcctcccctggactccgtccacctcccactcaaagcccctcACTCAGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885200 310 - 106955855 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCTCTGCTGCAGGTGGGACAAGACAGGCCCCTATGGAATCGGGT-CTGGGAGG-CTCCCTGGGAGGTCTCCTCTCCCAGGAGGTCACATCTGGGAgtcagagctgaaaggaactttcccaccc-agaggcctctcgcctttacacttggagaaacggaggcccaggcaggggaggggcctgtccacatcaccatcaccagaggagcctcaaactgatgacagaactcagcccttcctcccCTGGACCCCGCCCACCTCCCACTTAAAGCCCCTCACTCAGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60144837 305 + 64156825 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctctttcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccatgtcaccatcaccagaggagcctcaaactgatgacggaactcagcccttcctcccCTGGACCTCGCCCACCTCCCACTCAAAGCCCTGCA------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232346 305 + 59248254 CTCTGCTCCCCTCCCCTGCCCCAGGTCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaacgttcccaccc-gcaggcctcttgcctttacacctggagaaactgaggcccaggcaggggaggggcctgtccatgtcaccgtcaccagaggagcctcaaactgatgacggaactcagcccttccTCCCCTGGACCTCGCCCACCTCCCACTCAAAGCCCTGCA------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339344 312 + 51301725 ctctgctcccctcccctgccccaggtCACC------GTCACTGCTGCAGGTGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTGTCCTCTCCCAGGAGGTCCCAGCTGGGAGTCAGAGCTGAAAGGAACTTTCCCACCC-GGAGGCCGCTCGTCTTTACacttggagaaactgaggcccaggcaggggagGGGCCTATCCATGTCACCATCACCAGAGGAGCCTCAAACTGATGACGGAACTCAGCCCTTCCTCCCCTGGACCCCACTCACCTCCCACTCAAAGCCCTGCACTCACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47021932 311 + 50890351 CTCTGCTCCCCTCCCCTGCCCCAGATCACT------GTCACTGCTGCAGGAGGGAAAGGACAGGCCCCTATGGAATCGGGTCCTGGGAGGCTTCCCTGGGAGGTCTCCTTTCCCAGGAGGTCCCAGCTGGGAgtcagagctgaaaggaactttcccaccc-gcaggcctcttgcctttacacttggagaaactgaggcccaggcaggggaggggcctatccatgtcaccatcaccagaggagcctcaaactgatgacagaactcagcccttcctcccctggaccctgcccacct-ccactcaAAGGCCCTCACTCACCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542301 277 + 49145316 CCCTGCTCCCCTCCTCTGCCCCAGGTCACCGTCACTGTCACTGCTGCAGTTGGGACAGGACAGGCTCCTGAGGAATCAGGC-CTGGGAGGCTTCCCTAGGTGGCCTCCTCTCTCAGGAGGTCACAGCTGGGAgtcagagctaaaaggaactttcccaccctgcaggcctctctcctttacacttggagaaactgaggcctaggcaggggaggggcct-----------------------------------------GAACTGAGCCCTGCCTCCCCTGGACCCCACCCACCTCCCGCTCAGAGACCCCGACTAACCA i calJac3.chr22 T 2854 C 0 e canFam3.chr1 102763544 0 + 122678785 I a score=134530.000000 s hg38.chr19_GL949753v2_alt 313678 56 + 796479 CTGTGGGGGCCTGACGTTGTGGGGGTGAGGGGCTGGTCCTCAGGGCCTGCTGGGTC s panTro4.chr19 59265749 55 + 63644993 CTGTGGGGGCCTGACGTTGTGGGGGTGAGGGGCTGGTCCTCAGGGC-TGCTGGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122937 56 + 60714840 CTCTGGGGGCCTGATGCTGTGGGGTTGAGGAGCTGGTCCTCAGGGCCTGCTGGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885510 55 - 106955855 CTGTGGGGGCCTGATGCTGTGGGG-TGAGGGGCTGGTCCTCAGGGCCTGCTGGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145142 46 + 64156825 ----------CTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGCCTGTTAGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232651 46 + 59248254 ----------CTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGCCTGTTAGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339656 56 + 51301725 CTGTAGAGGCCTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGCCTGTTAGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022243 56 + 50890351 CTCTGGGGGCCTGACCCCATGGGGGTGAGGGGCTGGTCCTCATGGCCCGTTGGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542578 56 + 49145316 CTGTGGGGATCTGGCTCCATGGGAGTGAAAAGCTGGTCCTCAGGGACTGCTGGGTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3715361 54 + 145441459 CTTCTGAGGCCTGACTCCATGCAGGTGACAGG--GGCCATGCCGAGCTTTAGGGGT i mm10.chr7 N 0 C 0 e canFam3.chr1 102763544 0 + 122678785 I a score=632914.000000 s hg38.chr19_GL949753v2_alt 313734 234 + 796479 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCCGGCTGCTCCT-CCCCAGGCTGCGCCCCAACATCTCTCTCTGCCTCGACCCCC-GCCCCTCACCAGCCCAGCCTCAGAGCCCCGG-----GGAGCCTGTGGC----CCCTCCTCTGGCT-CTGCCTCAGCTCCCTGGAGGGAAGCTCGTGCTTGAGTCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCC s panTro4.chr19 59265804 235 + 63644993 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCTGGCTGCTCCT-CCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCCCCTGCCCCTCACCAGCCCAGCCTCAGAGCCCCGG-----GGAGCCTGTGGC----CCCTCCTCTGGCT-CTGCCTCAGCTCCCTGGAGGGAAGCTCGTGCTTGAATCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56122993 235 + 60714840 AGGATGGGGAGGTGAGGGCTGGGGCTGCCCTGCTCCCCACGTCAGCCCAGTTGCTCCTCCCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCCCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCGG-----GGAGCCTGTGGC----CCCTCCTCTGGCT-CTGCCTCAGCTCCCTGGAGGGAAACTCGTGCTTG-GTCCTTGAGGGGAATGGGATCATC-TGGGAGACTCAGGACTGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885565 235 - 106955855 AGGACGGGGAGGGGAGGGCTGGGGCTGCCCTGCTCCCCATGTCAGCCTGGCTGCTCCTCCCCCAGGCTGGGCCCCAACATCTCTCTCTGCCTCGACCGCCCGCCCCTCACCAGCCCAGCCTCAGAGCCCCGG-----GGAGCCTGTGGC----CCCTCCTCTGGCT-CTGCC-CAGCTCCCTGGAGGGAAGCTCGTGCTCGAGTCCTTGAGGGGAATGGGATCACC-TGGGAGACTCAGGACTGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145188 219 + 64156825 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGCCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAACATCTTGCTCTGCCTCGACCCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTG-----GGAGCCTGTGGC----CCCTCCTCTGGCT--------------CTGGAGGGAAGCCGGTACTTGAGTCCTTGAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232697 219 + 59248254 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGTCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAACATCTCCCTCTGCCTCGACCCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTG-----GGAGCCTGTGGC----CCCTCCTCTGGCT--------------CTGGAGGGAAGCCGGTACTTGAGTCCTTGAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339712 211 + 51301725 AGGACAGGCAGGGGAGGGCTGGGACTGCCCTGCTCCCCACGTCAGCCTGGCTGCTCCTTCCCCAGGCT-GGCCCCAGCATCTCCCTCTG-------CCC--GCCCCTCACCAGCCCAGCCT--GAGCCCCTG-----GGAGCCTGTGGC----CCCTCCTCTAGCT--------------CTGGAGGGAAGCACGTGCTTGAGTCCTTCAGGGGAATGGGATCCTC-TGGGAGACTCAGGACTGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022299 219 + 50890351 AGGACGGGGAGGTGAGGGCTGGGACTGCCCTGCTCCCCACATCATCCAGGCTGCTCCTTCCCCAGGCTGGGCCCCAGCATCTCCCTCTGCCTAGACCCC--GCCCCTCACCAGCCTAGCCT--GAGCCCCTG-----GGGGCCTGTGGC----CCCTCCTCTGGCT--------------CTGGAGGGAAGCCCGTGCTTGAGTCCTTGAGGGGAACGGGATCCTC-TGGGAGACTCAGGACTGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45542634 226 + 49145316 AGGATGGGGACATGAGGATTGGGGCTGACCTGCTCCCCATGTCAGTCCGGCTGCTCCTCCCTCAGGCTGGGCCCCATCATCTCCCACTGCCTCGACCTCCTGCCCCTCACC-----AGCCTCAGAG-CCCTG-----GGAGCCTGTG------CCCCTGTCTGTCT-CTGCC-CAGCCCTCTGGAGGGAAGTCTGTGCT-GAGTCCTTGAGTGGAACAGGATCCTC-TGGGAGACCCGGGACTGCCC i calJac3.chr22 C 0 I 14658 s mm10.chr7 3715415 216 + 145441459 AAGATAGGGAACTGAGTGTTTGTGTT-CCCTGCTTTCAACTTCC-CACAACTGCCCCACCCCCATGATGAGCCTAAATACTTCTCTCTGAATC--------TCCCTGCTGTAGCCCAACCTCTGAGCCCCAGCTTCAGTGGTCTCTGGTGAGATCTTTGTTTGCCTCCTACATCTACAAGCTGAAGTGA-------------------GATAGAAATGAGGAC-TG-TGGTGGGCCAAGAGCTGCCA i mm10.chr7 C 0 I 10 s canFam3.chr1 19732406 176 - 122678785 AGGACAGGGAGGTGAGGAGGTAGGCTCCTGAGCTCCCCACTTCAGCCTGGCTGCTCTTCCCCCAGCTGGGGCCCCAGTCTATCCCTCTGCC----------ATCCTCCTCCG--CCGGCCTCAGAGCTCCTG-----GAGCCCTGTGGTG---GCCTGCCATCCCT------------------------------GCCTGACTCCCAGCC---------ATCCTCTTGAGAGAC------------ i canFam3.chr1 T 12775 C 0 a score=32325.000000 s hg38.chr19_GL949753v2_alt 313968 16 + 796479 TGGGGGAGGCCACCCT s panTro4.chr19 59266039 16 + 63644993 TGGGGGAGGCCGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123228 16 + 60714840 TGGGGGAGGCTGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885800 16 - 106955855 TGCGGGAGGCCGCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145407 16 + 64156825 TGCGGGAGGCCGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232916 16 + 59248254 TGCGGGAGGCCGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339923 16 + 51301725 TGCGGGAGGCCGCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022518 16 + 50890351 TGCGGGAGGTTGCCCT i chlSab2.chr6 C 0 C 0 s mm10.chr7 3715641 14 + 145441459 GGTGGGAGAATACT-- i mm10.chr7 I 10 C 0 s canFam3.chr1 19732582 13 - 122678785 TGGGAGAAATGAT--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45542860 14658 + 49145316 I a score=720902.000000 s hg38.chr19_GL949753v2_alt 313984 223 + 796479 CCCTCTGAGCCCAGAGGCCTCAATGACTCACCAGGTATGGAGAAGGAGCCTATG------GGTGGAGGGCTGGGGCCCCTGGAGGGTCCTGGGAAGGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCAGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT s panTro4.chr19 59266055 223 + 63644993 CCCTCTGAGCCCAGAGGCCTCAATGACTCACCAGGTACGGAGAAAGAGCCTATG------GGTGGGGGGCTGGGGCCCCTGGAGGGTCCTGGGAAGGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTTTCCATCTGCCCAGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123244 223 + 60714840 CCCTCCTAGCCCAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTGGGGGGCTGGGGCCCCTGGAGGGTCCTGGGAATGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCGGTGGCCTCTCCGAGACCATCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102885816 223 - 106955855 CCCTCCGAGCCCAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTGGGGGGCTGGGGTCCCTGGAGGGTCCTGGGAATGAGCACAGAAAGGGAGTGAGGAATTGGAGC-TATCCTGGAGTCCCCACCTCCACTCAAAGCTCTCCTCTCCATCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTGGCACC-TTCTGGACTCCAGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145423 223 + 64156825 CTCTCCGAGCCCAGAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGAGGGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCGTCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTCCCCACCTAGCACC-TTCTGGACTCCAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55232932 223 + 59248254 CTCTCCGAGCCCAGAGGCCTCAATGACTCACCCGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGAGGGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCGTCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGGACC-TTCTGGACTCCGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47339939 222 + 51301725 CTCTCCGAGCCCAGAGGCCTCAGTGACTCACCAAGTGTGGAGGAGGAGCCTGTG------GATTGGGGGCTGGGATCCCTGGA-GGTCCTGGGAATGGGCACAGAAAGGGACTGAGGAATTGGAGC-TATCctgcaggccccacctccactcAAAGGTCTCCCCTCCATCTGCCCGGTGGCCTCTCCAAGaccctccctcttcccacctaGCACC-TGCTGGACTCCAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022534 222 + 50890351 CTCTCTAAACCTAGAGGCCTCAATGACTCACCAGGTGTGGAGGAGGAGCCTGTG------GGTTGGGGGCTGGGATCCCTGGA-GGTCCTGGGAATGAGCACAGAAAGGGACTGAGGAATTGGAGC-TATCCTGCAGTCCCCACCTCCACTCAAAGCTCTCCCCTCCATCTGCCCGGTGGCCTCTCCAAGACCCTCCCTCTTCCCACCTAGCACC-TTCTGGACTCCAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45557518 221 + 49145316 CCGTCTGAGCCTAGAGGCCTCAGT--CTCACCAGGTGTTGCGGTGGGACCAGTG------GGTGGGGGACTGGGACCCCCAGG-GGTCCTGGGAATTAGCACAGAAAGGGAGTGAGGAACTGGAAC-TATCCTGGAGTCCCCACCTCCACTTAAAGATCTCGCTTCCATCTACCTGGTGGCCTTTCCAAGTCCCTCCCTCTTCCCACCTAGCACCAATCTGGATTCCAGGT i calJac3.chr22 I 14658 T 14661 s mm10.chr7 3715655 209 + 145441459 CCCT----GCACAGAGTACCTGAT-ACTTACCACCTAGTGGCATGGACATTGTG------GGTGGCGGGGTAGAGGTTTCGATGGGTCCTAGGAAAGAGAACAAGAAGAGGACGAGGATTAGATGC-AAGCCCAGGATCCTCA-CTTGGTTCA-----CTGTCCTCTATCTGCCCTGTAAACTCTGCAAGATACTGATAGTCGCTACTCCAAACC----TAGATTGCAGTA i mm10.chr7 C 0 I 3 s canFam3.chr1 19732595 212 - 122678785 AACTCCCAGAACAGAAGCCCCTGTAACTCACCAGCTGGTGAGCTGGGTCCCGGGGAGTGTGGATGGGGGCTGAG-TCTCTAGAGAATCCTGGGGTAAAGGACAGTACTGG--TGGGGGGCTGGAGCTTCTCCTAGAGACCCTGTCTCTGCTCACACTCTTCTCCTTCATCTGCCC--TGGCCCAGCCTAGAGC-------------CCTGGAGAC-ATGTGGACCCTAGGT i canFam3.chr1 C 0 C 0 a score=5500.000000 s hg38.chr19_GL949753v2_alt 314207 1 + 796479 G s panTro4.chr19 59266278 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123467 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886039 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145646 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233155 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340161 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022756 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543078 1 + 49145316 G i calJac3.chr22 T 14661 C 0 s mm10.chr7 3715867 1 + 145441459 G i mm10.chr7 I 3 C 0 s canFam3.chr1 19732807 1 - 122678785 G i canFam3.chr1 C 0 I 275 a score=12432.000000 s hg38.chr19_GL949753v2_alt 314208 4 + 796479 AAGG s panTro4.chr19 59266279 4 + 63644993 AAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123468 4 + 60714840 AAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886040 4 - 106955855 AAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145647 4 + 64156825 AAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233156 4 + 59248254 AAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340162 4 + 51301725 AAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022757 4 + 50890351 AAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543079 4 + 49145316 AGGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3715868 4 + 145441459 ACTG i mm10.chr7 C 0 C 0 e canFam3.chr1 19732808 275 - 122678785 I a score=450608.000000 s hg38.chr19_GL949753v2_alt 314212 154 + 796479 AGAAGA----------GGGAGAACTCCTGTTGGCTTCTTCTCCTCTGAGGG-GTGAATTCCTCTGTGGCTGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAACTTAGAGAGGACAGGGT s panTro4.chr19 59266283 154 + 63644993 AGAAGA----------GGGAGAACTCCTGTTGGCTTCTTCTCCTCTGAGGG-GTAAATTCCTCTGTGGCTGAGCATCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123472 151 + 60714840 AGAAGA----------GGGAGAACTCCTGTTGG---CTTCTCCTCTGAGGG-GTGAATTCCTCTGTGGCTGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886044 152 - 106955855 AGAAGA----------GGGAGAA---CTGTTGGCTTCTTCTCCTCTGGGGGCGTGAATTCCTCTGTGGCTGAGCCTCCCTCACA--GTCCCCTTCACTCCATCTCTGCCCAGAGCTCTCCTAGGGGCAGAGC-CTGAGCTGAGTCTTTGAGCTTAGAGAGGACAGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145651 154 + 64156825 AGACGA----------GGGAGAACCGCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCGAACTTAGAGAGGGCAGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233160 154 + 59248254 AGAAGA----------GGGAGAACCGCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCGAACTTAGAGAGGGCAGGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340166 154 + 51301725 AGAAGA----------GGGAGCACCCCTGTTGGCCTCCTCTCCTCTGAGGG-GCGAATTCCTCTGTGGCCGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTCCAACTTAGAGAGGGCAGGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022761 154 + 50890351 AGAAGA----------GGGAGAACCCCTGTTGGCCTCTTCTCCTCTGAGGG-GCGAATTCCTCTGTAGCTGAGCCTCCCTCAGA--GCCCCCTTCACTCCATCTCTGCCCAGAGCGCTCCTGGGGGCAGGGC-CTGAGCCGAACCTTTGAACTTAGACAGAACAGGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543083 156 + 49145316 TGGGTGTG-----CCTGGGAGGGCCCC-ATTGTCCTCCTTCCCTCTGAGGC-CTGAG-GCCGCTCTGGCTGAGCCTCCTTCAGA---CCCCGCTCCCTCCATCCCAGCCCAGAGCTCTCCTGGGGGCAGGGC-CTGAGCTGAGCCTTTGAGCTCAGAGAGGACATGGT i calJac3.chr22 C 0 C 0 s mm10.chr7 3715872 153 + 145441459 AGTGGACATTACTCGAGGGAGCA---CTGCTAGCATTAATTCCTCTGCCAG-GGAAACTGTCTTCTGACAAAGCCATCTTCCTTTTGTCTCCTTAATCCCAACCCAGTAAACAGCTCTGCTACAGTATGGAA-GTGA--------TTCATGCT--GAGAAGTCAGGAT i mm10.chr7 C 0 C 0 s canFam3.chr1 19733083 155 - 122678785 AGGGGT----------GCGAGGGCCCCTGTTGGCTTCTTTTGAGTTGAGGG-ATAGATCTCCCTTTGAATGACCTTCCTTCAGA--GCCCCCTTTTTCCCAACCCAGCCCAGGTAACCATTGAGGAAAGACCTCTGAATAGATCAACAGGACATAGAGGGGAGAGGGT i canFam3.chr1 I 275 N 0 a score=8595.000000 s hg38.chr19_GL949753v2_alt 314366 2 + 796479 CA s panTro4.chr19 59266437 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123623 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886196 2 - 106955855 CA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145805 2 + 64156825 CA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233314 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340320 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022915 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543239 2 + 49145316 CA i calJac3.chr22 C 0 C 0 s mm10.chr7 3716025 2 + 145441459 CA i mm10.chr7 C 0 N 0 a score=7200.000000 s hg38.chr19_GL949753v2_alt 314368 2 + 796479 GG s panTro4.chr19 59266439 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123625 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886198 2 - 106955855 GG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145807 2 + 64156825 GG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233316 2 + 59248254 GG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340322 2 + 51301725 GG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022917 2 + 50890351 GG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45543241 2 + 49145316 GG i calJac3.chr22 C 0 I 19641 a score=122242.000000 s hg38.chr19_GL949753v2_alt 314370 52 + 796479 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGCGGTGTGATAGCAGGTAGGGG s panTro4.chr19 59266441 52 + 63644993 GCCTTTC-----------ACCCAGGACCACCAGCTCC---------------------------------------------------GACTGCGGTGTGATAGCAGGTAGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123627 52 + 60714840 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------AACTAGGGTGTGACAGCAGGTTGGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886200 52 - 106955855 GCCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTAGGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145809 114 + 64156825 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCCGCAGGGTCAGGACCTTTCACCCAAGACCGTCAACCCAAGACCACCAGCTCTGACTGGGGTGTGACAGCAGGTCGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233318 63 + 59248254 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTCGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340324 63 + 51301725 ACCTTTCACCCAAGACCAACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGGGTGTGACAGCAGGTCGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022919 52 + 50890351 ACCTTTC-----------ACCCAAGACCACCAGCTCC---------------------------------------------------GACTGGCGTGTGACAGCAGGTCAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562884 58 + 49145316 -GCCCTC-----------ACCTGAGACCACAAGCTCCAGGGGGT--------------------------------------------CACTGGGGTGAGACAGCAGGTAGGGG i calJac3.chr22 I 19641 T 4986 a score=52772.000000 s hg38.chr19_GL949753v2_alt 314422 22 + 796479 GAGGTGCAGTCATGTGAGAATC s panTro4.chr19 59266493 22 + 63644993 GAGGTGCAgtcatgtgagaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123679 22 + 60714840 GAGGTGCAGCCATGGGAGAATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886252 22 - 106955855 GAGGTGCAGCCATGGGAGAATc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145923 22 + 64156825 AAGGTGCAgtcatgtgagaatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233381 22 + 59248254 AAGGTGCAGTCATGTGAGAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340387 22 + 51301725 AAGGTGCAGTCATGTGAGAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022971 22 + 50890351 AAGGTGCAGTCATGTGAGAATC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45562942 4986 + 49145316 T a score=58970.000000 s hg38.chr19_GL949753v2_alt 314444 20 + 796479 TTGAAGGTGCCCATGAAGGG s panTro4.chr19 59266515 20 + 63644993 ttgaaggtgcccatgaaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123701 20 + 60714840 TTGAAGCTGCCCATGAAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886274 20 - 106955855 ttgaagctgcccatgaaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145945 20 + 64156825 ttgaagctgcccatgaaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233403 20 + 59248254 TTGAAGCTGCCCATGAAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340409 20 + 51301725 TTGAAGCTGCCCATGAAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47022993 20 + 50890351 TTGAAGCTGCCCATGAAGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19938089 20 - 122678785 ttgatgttggtcatgacggg i canFam3.chr1 N 0 C 0 e calJac3.chr22 45562942 4986 + 49145316 T a score=390628.000000 s hg38.chr19_GL949753v2_alt 314464 130 + 796479 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACTTTTTTGTTGTTG--TTCAGGAAGCCAGTCTATGCGCACAACAGCAGGCTTTTCCATCAAACACTTCTCTTTTGATT s panTro4.chr19 59266535 130 + 63644993 agtgtttataccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACTTTTTTGTTGTTG--TTCAGGAAGCCAGTCTATGCGCACAACAGCAGACTTTTCCATCAAACACTTCTCTTTTGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123721 127 + 60714840 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACTTTT---TTGTGG--TTCACGAAGCCAATCTATGGGCACAACAGCAGGCTTTCCCATCAAACACTTCTCTTTTGATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886294 130 - 106955855 agtgtttatgccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACTTTTTTGTTGTTG--TTCAGGAAGCCAGTCTGTGGGCACAACAGCAGGCTTTTCCATCAAACACTTCTCTTTTGATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60145965 130 + 64156825 agtgtttataccacagtcatcaacaaattccacaa---ataaatgctttttAGAAAACGTTTTTGTTGTCG--TTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233423 130 + 59248254 AGTGTTTATACCACAGTCATCAACAAATTCCACAA---ATAAATGCTTTTTAGAAAACGTTTTTGTTGTCG--TTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340429 130 + 51301725 AGCGTTTATACCACAGTCATCAACAAATTCcacaa---ataaatgctttttagAAAACGTTTTTGTCATCG--TTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i papAnu2.chr19 C 0 I 307 s chlSab2.chr6 47023013 130 + 50890351 AGCGTTTATACCACAGTCATTAACAAACTCCACAA---ATAGATGCTTTTTAGAAAACGTTTTTGTCGTTG--TTCAGGAAGCCAGTCTATGGGCACAACAGCAGGCTTTTCCATCAGACACCTCTCTTTTGATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45557956 132 + 49145316 agtgcttagattacagtcatgagccactgtgccAAAGCATAAATGCTTTTTAGAAAACCTTTTTTTTGTTG--TTCAGGAAGCCAGTTTA-GGGCACAACTGCAGGCTTTTCCATCAAACACCTCTGTTTTGATT i calJac3.chr22 T 4986 C 0 s canFam3.chr1 19938109 122 - 122678785 agtgtttacatcaaagaaataggcaaatgtcatga---atGATATCTGTTTAAAAA----------TGATGAATTCTTAGAGCCAGTATAGAAGCTCACTACCAGGGTATCACTTCAAATGCCCCTGAATTCACT i canFam3.chr1 C 0 C 0 a score=509848.000000 s hg38.chr19_GL949753v2_alt 314594 170 + 796479 CCTAGTGACTGTATCTCTGGAGAAAC-TACAGAT-----------------GAAGAGT------------GACAGGTGGTACAGCATCACTTTGAACTTAGATTTTCCAAACACGAATCTGATTTTTGCCCATGGATTTAATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTC-CC--AGTAATACACATTAG s panTro4.chr19 59266665 170 + 63644993 CCTAGTGACTGTATTTCTGGAGAAAC-TACAGAT-----------------GAAGAGT------------GACAGGTGGTACAGCATCACTTTGAAATTAAATTTTCCAAACACGAATCTGATTTTTGCCCATGGATTTAATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTC-CC--AGTAATACACATTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56123848 170 + 60714840 CCTAGTGACCGTATTTCTGAAGAAAC-TACAGAT-----------------GAAGAGT------------GGCAGGTGATAAGGCATCACTTTGAACTTAAATTTTCCAAACACGAATCTGATTTTTGCCCGTGGATTTAATTCTC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGAC-CC--AGTAATACACATTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886424 170 - 106955855 CCTAGTGACCGTATTTCTGGAGAAAC-TACAGAT-----------------GAAGAGT------------GACAGTTGGTACAGTATCACTTTGAACTTAAATTTTCCAAACACGAATCTGATTTTTGCCCACGGATTTAATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTC-CC--AGTAATACACATCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146095 170 + 64156825 CCTAGTGACTGTATTTCTAGAGAAAC-AACAGAT-----------------GGAGAGT------------GACAGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGCACATGGATTTAATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAAAGATAGTC-CC--AGTAATACACATCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233553 170 + 59248254 CCTAGTGACTGTATTTCTAGAGAAAC-AACAGAT-----------------GGAGAGT------------GACAGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGCACATGGATTTAATTATC-AAAAGCAAATTCCATGTTATGAGCAGAAAAGATAGTC-CC--AGTAATACACATCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47340866 170 + 51301725 cctagtgacTGTATTTCTAGAGAAAC-AAAAGAT-----------------GGAGAGT------------GACAGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAaatctgatttttgcacatggatttaATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAAAGATAGTC-CC--AGTAATACACATCAG i papAnu2.chr19 I 307 C 0 s chlSab2.chr6 47023143 170 + 50890351 CCTAGTGACTGTATTTCTAGGGAAAC-TACAGAT-----------------GAAGAGT------------GACAGGTGGTAGGGCATCACTTTGAACTTAAATTTTGCAAATGCAAATCTGATTTTTGTACATGGATTTCATTATC-AAAAGCAAATTCCATGTTATGAGCTGAAGAGATAGTC-CC--AGTAATACACATCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558088 171 + 49145316 CCTAGTGACCATATTTCTGGAGAAAC-TACAGAG-----------------GAAAAGT------------GACAAGTGGTAGGGCATCATTTTGGACTTAAATTTTCCAAACATGAATCTGATTTTTGCCCATGCATTTAATTATCAAAAAGCAAATGTCATGT--TGAGCTGAAAAGATAGTC-CCAAAGTAATACACATCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19938231 198 - 122678785 CAAACTGATGGTATTTCTGGAAAAACTTCCAGGTATCACCTGATGAGGAGAGAAGAGTTCTATGAATCCAGAGAGGATTTAGGGAGTGGTTTTGGATTC--TTTTTTCCAATGTGGACATAATATTCACCCAAGTATTTACTTCT--GAAGACAGATTTTGTTATTTGGGCTGCAGGGATGGAAGTC--AATAGCACCCATCAG i canFam3.chr1 C 0 N 0 a score=455938.000000 s hg38.chr19_GL949753v2_alt 314764 154 + 796479 AAAATGCAGTAGTTAGAAATAAAGAAAGGTGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCGGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAACGAAGGAAGGGGCAGTCAAGGAGAGTCGACA s panTro4.chr19 59266835 154 + 63644993 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCAGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAACGAAGGAAGGGGCAGTCAAGGAGAGTCGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56124018 154 + 60714840 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGGGCGGACCCAAACCCACCATAGGGGTGAAGCCTTACTTCATAGGG-AAGAAAAACGAAGGGAGGGGCAGTCAAGGAGAGTTGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886594 154 - 106955855 AAAATGCAGTAGTTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCAGGAGGTCACAG--AGGGGTGGACCCAAACCCACCATAGGGGTGAAGCCTTACATCATAGGG-AAGAAAAATGAAGGGAGGGGCAGTCAAGGAGAGTCAACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146265 154 + 64156825 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--AGGAGTGGACCCAAACTCACCATAGGGGCAAAGCCTTACATCATAGGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAGGAGAGTCAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233723 154 + 59248254 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGTATGAGGTCACAG--TGGGGCGGACCCAAACTCACCATAGGGGCAAAGCCTTCCATCATAGGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAAGAGAGTCAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341036 154 + 51301725 AAAATGCACTAGCTAGAAATAAAGAAAGATGTATTACCTGAAAGTGGAGCAGAGTATGAGGTCACAG--TGGGGCAGACCCAAACTCACCACAGGGGCAAAGCCTTACATcataggg-aagaaaaaggaagggaggggcagTCAAGGAGAGTCAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47023313 154 + 50890351 AAAATGCACTAGCTAGAAATACAGAAAGATGTATTACCTGAAAGTGGAGCAGAGCATGAGGTCACAG--TGGGGCGGACCCAAACTCACCATAGGGGCAAAGTCTTCCATCATAAGG-AAGAAAAAGGAAGGGAGGGGCAGTCAAGGAGAGTCAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558259 132 + 49145316 AAAACGTAGTAGTTAGAAATAATGAAAGATGTATTACCTGAAAGTGGAGCA-------------------------GATCCAAACCTACCATATGGGTGAAGCCTCACATCATAGGGAAAAAAAAAGGAAGGGAGGGGAAGTCAAGGAGAGTTGACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19738493 145 - 122678785 AAAGCTCAGCAGGTAGAAA---------ATGTATGCCACGAATA-GGACCAGAAGCTGCTGCTATAGGAAGGTATAAACCCAAACCTGCTGTGTGGGCCATACCCT-CATGAAACAG-GCGTGAGGGAAGATGAGGGACAGTCAAGGACATCCAACA i canFam3.chr1 N 0 C 0 a score=2026848.000000 s hg38.chr19_GL949753v2_alt 314918 565 + 796479 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACATCTTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTCCAGAACCTCCTCAGATCATCAGATCTGTTCCCAAGGCTCCACCACTCTGAAGGGTGCATTGTCCTTTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACAGCAGGACCAAGCCAGCCACACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCAAAGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGCCCCATAACTGGGAGAATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAG s panTro4.chr19 59266989 565 + 63644993 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACATATTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTCCAGAACCTTCTGAGATCATCAGATCTGTTCCCAAGGCTCCACCACTCTGAAGGGTGCATTGTCCTTTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTATGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACAGCAGGACCAAGCCAGCCACACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCAAAGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56124172 565 + 60714840 ATG--AGGAGGAA-AGCACCACAGTTTAAGGGAGGAAGCATCTTCTACAGACA----CCCAGACATCTTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATAATCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTCCAGAACTTTCTGAGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCCTCTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGGCTTCTCTGGCTGTGATGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCCAAGCCCATGCGGATGAGATTCTCCACTG----TGTAATCTTGGGGGTGTGAGGCTGGGGATGGTGTACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGCCCCACAAGTGGGAGCATCTCCTCACGCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAG----AATCAAAGAATAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102886748 565 - 106955855 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAGGCATCTTCTACAGACA----CCCGGACATCTTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCCGCCCCAG--------------TCTTCCAGGACTTTCTGAGATCATTAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCCTCTCTGCTGTTTGCCTCCTGGCTGCACCTTGGGGGCCTTCTCTGGCTGTGCTGAGCCTCAAATAACAGAATCCCGAGGAACACCAGGACCAAGCCAGCCAAGCCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGAACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACTCAGGACCCCTGGATGTCCACCCAGGGCAC---CCTCCTCCCCTTGAC----AGGAC-CTGACCTTCTGTGCCAAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTCTTTTGTGCTGGATTGAGGGTCTCAGTGGCTCCTAAG----GATCAAAGAACAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146419 565 + 64156825 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTGCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGTCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTTCTAAA----AATCAAAGAACAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55233877 565 + 59248254 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTGCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTTCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGCCCCATAACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTTCTAAA----AATCAAAGAACAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341190 564 + 51301725 ATG--AGGAGGAA-AGCACCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCTGCTGTTCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGACTCTGCTGAGCCTC-AATAACAGAATCCCAAGGAATACCAGGACCAAGCCAGCCACGCCCATGCGGATGAGATTCTCCACGG----TGTAATCCTGGGGGTGTGAGGCTGGGGATGGTGGACAAAGAAGTCACAGAGGTCAGGGCAGATCATGATTACCCAGGACCCCTGAATGTCCACCCAGGGTAC---CCACCTCCCCTTCAC----AGGAC-CTGAccctctgtgcccagccccataACTGGGAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTATTTTGTGCTGGATTGAGGGTCTCAGTTGCTCCTAAA----AATCAAAGAACAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47023467 560 + 50890351 ATG--AGGAGGAA-AGCATCACAGTTTAATGGAGGAAGCATCTTCTACAGACA----CCCAGACACCTTCCTGCACCTGACCCATGCTTCTTC-CCCTTGATATTCTCAGCAGACACTTCC-CCAACTGCTGCCCCAG--------------TCTTGCAGAACCTCCTGGGATCATCAGATCTGTTCCCAGGGCTCCACCACTCTGAAGGGTGCATTGTCTTCTCCGCTGTCCACCTCCTGGCTGCACCTTGTGGGGCTTCTCTGGCTCTGCTGAGCCTCAAATAACAGAATCCCAAGGAACACCAGGACCAAGCCAGCTATACCCATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGGGGCTAGGGATGGTGGACAAAGAGGTCACAGAGGTCAGGGCAGATCACAATTACCCAGGACCCCTGGATGTCCACCCAGGGTAC---CCACCTCCCCTTGAC----AG------GACCCTCTGTGCCCAGCCCCATAACTGGGGGCATCTCCTCACTCACCAGTCTTAGAATCTGACTTATTTTGTGCTGGACTGAGGGTCTCAGTTGCTCCTAAA----AATCAAAGAACAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558391 564 + 49145316 ATG--AGGAGGAA-AACACCACAGTTTAGTGGAGGAAGCATCTTCTACAGACA----CTCAGACATCATCCTGCACCTGACCCATGCTTCTTC-CCCTCGACATTCTCAGCAGACACTTCC-TCAGCTGCTGCCCCAG--------------ACTTCCAGAACCTCCTGGGATCATCAGATCTGTTCCCGAGGCTCTGCCACTCTGAAGCGTGCACTGTC---TCTGCTGTTCACCTCCTGGCTGCATCTTG-GGGGTTTCTCTGCCTGTGCTGAGCCTCAAATAGCAGAATCCCGAGGACCACAAGGATGAAGCCAGCCACGCCTATGCGGATGAGATTCTCCACTG----TGTAATCCTGGAGGTGTGAGGCTGGGGATGGTAGACAAAGAGGCCACAGAGGTCAGGGCAGATCACAATTACCTAGGACCCCTGGATGTCCACCCAGGGCACCCACCACCTCCCCTTGAC----AGGAC-CTGACCCTCTGTGCCCAGCCCCATAACTGAAAGCATCTCCTCACTCACCAGTCTTGGAATCTGACTTTTTTTGTGGTGGGTTGAGGGTCTCAGCTGCTCCTAAG----AATCAAAGAACAAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3837989 563 + 145441459 ATG--TGGAGGGACAGTAATTCATTT--ATTGAGGAAGCACCTCATTATGACA----CTTCCACTTCCCTCTGAAC----CCCAAACTTTTGCTTCCTAGACATTCTTA--CAACAGTTCC-TCAA-TACCACAACAGGATTTTTTTTTTCTTTTGACAGAAAACTTTGGG-TCATCAGCTTTATTTCCCAGAGTGTAGAACATTGAAG-ATGCATTCTTTTTTCTTTAGATTAGTTCCCAGCTGCAGGGTG-GGTCTGTCTATGGCTTCGCCAAGCCTCAGTGGCTAGAATCGAAAGGACGATGAGGACCAGGACTGCCATCCCCATCCTGATGAGATTCTCCATTG----TGTGATCCTTGTTCTCTGTGGCTGTGGA-GTTAGATACAGAAGTTACAGAAGTTAGGGATGGTCAAAGTTTCCTAA-----CTAAGCATCCAACCAGAGCCC---TTGCTGTCCTTGGGG----AGGACAATGTTGTACTCTTTCCAGTGCTATGACTTGAAAT-TGTCTTTATTCAACTGCCTAGGTTTTGGACATGTTCTAGCATGAACAGATGTTCTCAGCTGGTCCTAAG----AATAGTAGAAGAAG i mm10.chr7 N 0 I 2339 s canFam3.chr1 19738638 575 - 122678785 ATGGCAGGAGGGACAGCATCACACGTC-ATGGAGGATGAGTTCTGGACAGGGAACAGCCCAGATACTTCCTGGCCCCTAAACCATGTTTC--C-CTCTCTGTGTTCTCAGCAGACAGCTCAGCTAACAGGAGCTCCATGCTC----------TCTTCCAGATCCCCCTAGGCACATTACTTTCATGTCCAAAGCTCTGCCACAGGGAAGGGTGGGTT-TGCTCCCTG-TGTTTACCTCCTGGCTGCACCTGG-GGTCCTTCTCTGGCTGTGCTGAGCCTCTAGGAGCAGAATGCCCAGAAGCACCAGGACGAAGGTAGCCATGCCCAAGCGGATGAGATTCTCCACTGTGCATGTAATCCTTGAGGTCAGAGGTTAGGATTAG--GACAGAGAGGTCCCAGAGGTCAGGGTGGGCCCAAATCACCCGGGATCC--AGATGTCCTCCCAGGATAT---CCACCTCTCCCCGACAAGAAGGAC-TTCACCCTCCACACC-AGCCCGAGAACTGAGACTTTCTCCT-ACTCACCAGTGCTGGGGTCTGACATATTTTGGGGTGGGCTCACAGTGTCAGCTACTCCTGAGGGGAAATGGAAGCACA-- i canFam3.chr1 C 0 C 0 a score=447651.000000 s hg38.chr19_GL949753v2_alt 315483 147 + 796479 GATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCCTCCACCTCTCATGGTGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-GTCATTGGGT-TTTTCAA s panTro4.chr19 59267554 147 + 63644993 GATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCCTCCACCTCTCATGGCATGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-GTCATTGGGT-TTTTCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56124737 147 + 60714840 GATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCAATGCATTCTTATATTCTTCCATCTCTCATGGAGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTTGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i ponAbe2.chr19 C 0 I 117 s nomLeu3.chr10 102887313 147 - 106955855 GATGTTGGTGAGAAGCTGAAGAGCC--------CGTCCCCTGGGCTCTGCATTCTTATATTCCTCCATCTCTCATGGCGTGACT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTCACAGGCCTCCCCTGGTAC-ATCATGGGGT-TTTTCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60146984 147 + 64156825 GATGTTGGCAAGAGGCTGAAGAGCC--------TCTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGG-TTTTCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55234442 147 + 59248254 GATGTTGGCGAGAAGCTGAAGAGCC--------TCTCCCCCAGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGTTAT-GTCATTGGGG-TTTTCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341754 147 + 51301725 GATGTTGGTGAGAAGCTGAAGAGCT--------TGTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCATGGTGTGGCT-TTATGTAGATCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024027 147 + 50890351 GATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGCTCTGCTTTCTTATATTCCTCCATCTCTCGTGGTGTGGCT-TTATGTAGCTCCTTAGTGAACACATTCTCTGCTCTAGCAGGCCTCCCCTGGTAT-GTCATTGGGT-TTTTCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45558955 147 + 49145316 GATGTTGGTGAGAAGCTGAAGAGCC--------TCTCCCCTGGGTTCTGCATTCTTACATTCCTCTGTCTCTTGTGTCGTGACT-TTATGTAGATCCTTAGTGAACACAATCTCTGCTCTAGCAGGCCTTCCCTCGTAC-CTCATTGGGT-TCTTCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19739213 151 - 122678785 -----TGGTGAGGAACTGGAGACCCCCATCCAGCCTGCCTTCTTCTCTGTGTTC-TATATCCCTCCACTTGTCATCATCTCGTTCCTCTACAGTTCCTAAACTAGC-CCTTCACTGCACTAGAGGGGTTCGTCTGCTCTCCCCAGTGGATGCCCTCAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I a score=1063766.000000 s hg38.chr19_GL949753v2_alt 315630 350 + 796479 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGCCTGAGTCACTTTGAAACAAAGTTTACTTGAGCC-CAGGAGCTCAGGATTAGTAAGAAGAATGATCCCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTCACTCTTGGAAGTCAGGAGCACAAGCAAGG--GCTGGAGGCTGCAATGGCCCCCACTG-TGTGC-GCCTCAGACAGCTCC---CCTGTGGTTTCATCATCCATTTAAT s panTro4.chr19 59267701 351 + 63644993 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGCCTGAGTCACTTTGAAACAAAGTTTACTTGAGCC-CAGGAGCTCAGGATTAGTAAGAAGAATGATCCCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTTAGAAGTCAGGAGCACAAGCAAGG--GCTGGAGGCTGCAACGGCCCCCACTG-TGTGCTGCCTCAGACAGCTCC---CCTGTGGTTTCATCATCCATTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125001 346 + 60714840 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTAGAACAAAGTTTACTTGAGCC-CAAGAGCTCAGGATT-GTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGCGCAATCTTGTGCAACAAGAACACAACAACTAATTCCCCCAGAGATAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTGTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTTGGAAGTCAGGAGCA----CAAGG--GCTGGAGGCTGCAATGGCCCCCCCTG-TGTGCTGCCTCAGACAGCTCC---CCTGCAGTTTCATCATCCATTTAAT i ponAbe2.chr19 I 117 C 0 s nomLeu3.chr10 102887460 346 - 106955855 CCTCTCTGTGCTCTGAGAATTCAGATCTTGTGCCTGAGTCACTTTGGAACAAAGTTTACTTGTGCC-CAAGAGCTCAGGATTAGTGAGAAGAATGACCTCCCAACTAGAAAGAATTGGGCTCTTGTGTGCTGTCTTGGATGTGCAATCTCGTGCAACAAGAACACAACAGCTAATTCCCCCAGAGATAGAAAT-GTCCATTTTTCAGTGGACGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGCCACTCTT-GAAGTCAGGAGCA----CAAGG--GCTGGAGGCTGCAATGGCCCCCGCTG-TGTGCTGCTTCAGACAGCTCC---CCTGCGGTTTCATCATCCGTTTAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147131 347 + 64156825 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTCCTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACATAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCGGTAGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGTGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCGGTTTCATCATTCGTTTACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55234589 347 + 59248254 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTCCTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAACTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACATAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTAGATGAGGAGTTGGTCCTCGGTAGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCGGTTTCATCATTCGTTTACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47341901 347 + 51301725 CCTCTCTCTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGtttccttgagcc-caagagctcagGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGtgcaacaaaaacacaaaaactaattCCCCCAGAGatagaaat-ttccatttttcagtGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTGGCTCTTGAAAGTCCGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCTGCAGTTTCATCATTCATTTACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024174 347 + 50890351 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAACAACGTTTACTTGAGCC-CAAGAGCTCAGGACTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTGTGTGCTGTCTTGGATGTGCAATCTTGTGCAACAAGAACACAAAAACTAATTCCCCCAGAGACAGAAAT-TTCCATTTTTCAGTGGATGAGGACCCAGTCTCTGTGGATGAGGAGTTGGTCCTCAGTGGCTCTTGAAAGTCAGGAGTA----CAAGG--ACTGAAGGCTGCGATGGCCCCCGCTG-CGTGCTGCCTCAGCCAGCTCC---CCCGCTTTTTCATCATTCGTTTACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559102 344 + 49145316 CCTCTCTGTGCTCTGGGAATTCAGATCTTGTGTCTGAGTCACTTTGGAATAAAGTTTACTTGAGCC-CAAGAGCTCAAGATTAGTGAGAAGAATGATCTCCCAACTAGAAAGAATTGAGCTCTTAAGTGCTGTCTTAGATGTGTAATCTTGTGCAACAGGAACACAACA---AATTCCCCCAGAGATAGAAGT-TTCCATTTTTCAGTGGATGAGGACCCAGGCTCCGTGGACAAGGAGCTGGTCCTCAGCTGCTCTTGAAAGTCAGGAGCA----GGAGG--GCTGAGGGCTGCCACTGCCTCTGCTT-CGTGCTGCCTCAGCCAGCTCC---CCTGGGGTTTCCTTAACCATTTAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19739364 337 - 122678785 TCTCCTTCTTTTCCTTGATTTCAGACTTGGCTTCTGAGTCAGTCTGG-ATAGATTCTGGCTGTGCCTCAGGTGCTCAGGGTTGCAGAGAACTATAGCCTCCCAAC--ACAGAAATCATGTCCTTGTATGTTTAC-----TGTTCAGTCTGGGACA--TAAGACCTCCTAGCTCACAACCCTGCAGATGAGAGTGCTCAATGATTCAGTAGCCAAGAATCCAGCATCCAAGGAAGAGGCATTGGT-GTCAGGGGCTCCT----GTCAGGAGGA----CAGAGGTGCCAATGTGTGGAGTAGAGTCCCATGTCGTTCCATGTCAACCAGCTCCCTTCCTTTGGGTTCTGCAT---TTTAAT i canFam3.chr1 C 0 I 4108 e mm10.chr7 3838552 2339 + 145441459 I a score=530849.000000 s hg38.chr19_GL949753v2_alt 315980 185 + 796479 GTCTTGTTAACTAATTCTTCATATAGTTAGGAA--ACCTACAATGTGATATACTTAAATATGAAAATGTA-TTCTTTTCTAAATGATAATGACTAAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATCGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTtaa s panTro4.chr19 59268052 186 + 63644993 GTCTTGTTAACAAATTCTTCGTATAGTTAGGAAC-ACCTACAATGTGATATACTTAAATATGAAAATGTA-TTCTTTTCTAAATGATAATGACTAAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125347 186 + 60714840 GTCTTGTTAACTAATTCTTCATATAGGTAGGAAC-ACCTACAATGTGATATACTTAAACATGAAAATGTA-TTTTTTTCTAAATGATAATGACTGAGTGGGACAGGAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCGAATATTTAAAAACATACCTGAACTTaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887806 186 - 106955855 GTCTTGTTAACTAATTCGTCATATAGTTAGGAAC-GCCTACAATGTGATATACTTAAATATGAAAATGTA-TTTTTTTCTAAATGATAATTACTGAGTGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCCGAACTTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147478 185 + 64156825 GTCTTGTTAACTAATTCTTCATACAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATTTAAAAACATACCCaaacttaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55234936 185 + 59248254 GTCTTGTTAACTAATTCTTCATACAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCGTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATGTAAAAACATACCCAAACTTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342248 183 + 51301725 GTCTTGTTAACTAATTCTTCGTATAGTTAGGAAC-ACCAACAATGTGATAtacttaaatatgaaaa--ta-tttttttctaaatgataaTGACTGAGCGGGACAGAAAAACatcatttctgcttttttgaaGTATGAACCTAGATTGGAAGgtg-aaagcaaatatttaaaaacatacccaaacttaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024521 185 + 50890351 GTCTTGTTAACTAATTCTTCATATAGTTAGGAAC-ACCAACAATGTGATATACTTAAATATGAAAATGTA-TTGTTTTCTAAATGATAATGACTGAGCGGGACAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTG-AAAGCAAATATTTAAAAACATACCCGAACTTAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559446 172 + 49145316 GTCTCGTTAACTGACTCTTCATATAGTTAAGAACTATCTACAATGTGATA----TAAATACAAAAATGTATTTTTTTTCTAAATGATAATG----GGTGGGATAGAAAAACATCATTTCTGCTTTTTTGAAGTATGAACCTAGATTGGAAGGTGAAAAGCAAATATTTAAAAACATACCC-------- i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I a score=6960.000000 s hg38.chr19_GL949753v2_alt 316165 5 + 796479 agtaa s panTro4.chr19 59268238 5 + 63644993 AGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125533 5 + 60714840 agtaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887992 5 - 106955855 AGTAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147663 5 + 64156825 agtaa i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47024706 5 + 50890351 AGTAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45559618 0 + 49145316 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C a score=11090.000000 s hg38.chr19_GL949753v2_alt 316170 13 + 796479 aataaaaaataaa s panTro4.chr19 59268243 13 + 63644993 AATAAAAAATAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125538 13 + 60714840 aataaaaaataaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102887997 13 - 106955855 AATAAAAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60147668 13 + 64156825 aataaaaaataaa i rheMac3.chr19 C 0 I 665 s calJac3.chr22 45559618 2 + 49145316 -----------AA i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C a score=202221.000000 s hg38.chr19_GL949753v2_alt 316183 288 + 796479 ggccaggcgcggtggttcacgcctgtaatcccagcactttgggaggctgaggc-gggcggatcac--aaggtcaggagactgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac--------aaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgagaggatgaggcaggagaatggcgtgaaccccagaggcggagcttgcagtgagccgagatcgcaccactgcactccagcctgggcgac-agagtgagactccgtctc s panTro4.chr19 59268256 295 + 63644993 ggccaggtgcggtggttcacgcctgtaatcccagcactttgggaggctgaggc-gggcggatcac--aaggtcaggagactgagaccatcctggctaacatggtgaaaccccatctctactaaaaatac-aaaaaaaaaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgagaggatgaggcaggagaatggcgtgaaccccggaggtggagcttgcagtgagccgagatcgcaccactgcgctccagcctgggcgac-agagtgagactccgtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125551 293 + 60714840 ggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggcggggcggatcat--gagatcaggagattgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac----aaaaaaaaaaaaaaaaattagcctggcatggtggtgggctcctgtagtcccagctacttgggaggctgaggcaagagaacggcgtgaacccaggaggcggagcttgcagtgagctgagatcgcaccactgcactacagcctgggcgac-agagcgagactccatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888010 297 - 106955855 ggccaggcgtggtggctcacgcctgtaatttcagcactttgggaggccgaagcggggcggatcac--gaggtcaggggactgagaccattctggctaacacagtgaaaccccatctttactaaaaatacaaaaaaaaaaaaaaaaaaaaattagcctggcgtggtggtgggctcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagcgagctgagatcacaccactgtactccagcctgggtgat-tgacagatacaccatctc i nomLeu3.chr10 C 0 I 108 s calJac3.chr22 45559620 280 + 49145316 ggctgggtgtggtggctcacacctgtcatcctagtactttgggcagctgaggc-aagcagattacctgaggtcaggaactcaagaccagccttacc-atatggagaaaccccatctctactaaaaatac-----------------aaaattaacc-ggcatgatggagcatgcctgtaatcccagctacttgggaggctgagtcaggagaatcacttgaatctgggaggtggaggtttcggtgagccaagatcgtaccactgcactccagcctgggcaacaagagtgaaaccccatcaa i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C e rheMac3.chr19 60147681 665 + 64156825 I a score=514.000000 s hg38.chr19_GL949753v2_alt 316471 27 + 796479 -aaaaaaaataa-aat--------------aa-------aataaaataat s panTro4.chr19 59268551 35 + 63644993 -aaaaataataataat--------------aataataataataaaataat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125844 25 + 60714840 -aaaaaaaataaaaat-----------------------aattaaa-aaa i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45559900 40 + 49145316 aaaaacaaacaaaaaCCCATACCCGAACTTAA-------AGTAAAAT--- i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e nomLeu3.chr10 102888307 108 - 106955855 I e chlSab2.chr6 47024711 0 + 50890351 C e papAnu2.chr19 47342431 0 + 51301725 C e macFas5.chr19 55235121 0 + 59248254 C e rheMac3.chr19 60147681 665 + 64156825 I a score=36065.000000 s hg38.chr19_GL949753v2_alt 316498 36 + 796479 aataaaaaataaaaacaaataaatatttaaaaatCT s panTro4.chr19 59268586 36 + 63644993 aataataaataaaaacaaataaaTATTTAAAAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125869 36 + 60714840 aataaaaaataaaaacaaataaatatttaaaaatct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55235121 35 + 59248254 AATAAAAAATAAAAACAAATAAATATTTAAAAAAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342431 35 + 51301725 aataaaaaataaaaacaaataaatatttaaaaaat- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024711 33 + 50890351 AATAAAAAATAAAAACAAATAAATA--TAAAAAAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559940 26 + 49145316 ----AAAAACAATATCAAAAAAACATACCC------ i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e nomLeu3.chr10 102888307 108 - 106955855 I e rheMac3.chr19 60147681 665 + 64156825 I a score=946442.000000 s hg38.chr19_GL949753v2_alt 316534 455 + 796479 GATG-AAAAATATTAAGCACAGGATTGA--------------------ATACTTGA-ATATATGTTTGTGTCtatatatgtacatagcacatatattcatataaaatatatGTGATTAACATGGTTTATAAAATATATGTGATtaacatgctttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccaatgttggaggagaggcccagtgggaggtgattgg--------------cttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctgtcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgccatgattgtaagtttcccgaggcctccccagccaggcttcctgtatggcctgtggaaccgtgagttaattaaacctctttcctttataaattacccagtctcaggtaggt s panTro4.chr19 59268622 452 + 63644993 GATG-AAAAATATTAAGCATAGGATTGA--------------------ATACTTGA-atatacgtttgtgtctatatatgtacatagcacatatattcatataaaatatatgtgattaacatggcttataaaatatatgtgattaacatgctttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccagtgttggaggagaggcccagtgggaggtgattgg--------------cttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctgtcttcctcctattccagccat---agaagttcctgctttccctccgccttctgccatgattgtaagtttcccgaggcctccccagccaggcttcctgtatggcctgtggaaccgtgagttaattaaacctctttcctttataaattacccagtctcaggtaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56125905 441 + 60714840 gaag-aaaaataTTAAGCATAGGAGTGA--------------------ATACTTGA-atgtatgtttgtgtctatatatgtacatagcacatgtattcg---------------------------tgtaaaatatatgtgattagcatgctttgcatttgtgtctctctcaaatctcctgttggattgtaatccccaatgttggaggagaggcccagtgggaggtgattggcttgtaggagccgacttccccctggctgctctcatgatagtgagttgtcacgagatcttgttatttaaaagtgggtagcacctcccccttctctctcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgtcatgattgtaagtttcccgaggcctccccagccatgcttcccgtatggcctgcggaactgtgagccaattaaacctctttcctttctaaattatccagtctcaggtagg- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888415 439 - 106955855 GATG-AAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-atatatgtttgtgtctatatatgtacatagcacatgtattca---------------------------tataaaatatatgtgattaacatggtttgcatttgtgtctctctcaaatctcatgttgaattgtaatccccattgttggaggagaggcccagtgggaggtgattggcttgtggggccg--acttcccctggctgctcttgtaatagtgagttgtcatgagatcttgttatttaaaagtgggtagcacctcccccttctctctcttcctcctattccagccatagaagaagttcctgctttccctccgccttctgtcatgatcgtaagtttcccgaggcctccccagccatgcttcctgtatggcctgcggaactgtgagccaattaaacctctttctcttataaattatccagtctcaggtagg- i nomLeu3.chr10 I 108 C 0 s macFas5.chr19 55235156 467 + 59248254 GATG-GAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-ATGTATGTTTGTGTCtatatatgtacatagtacatatattcatataaaatatatgtgattaacatggcttataaaatatatgtgattaacatggtttgcatttgtgtccctttgaaatctcacgttgaattttaatccccagtgtcggaggagaggcccagtgggaggtaactggttcgtgggagccgacttcccccttgctgctctcatgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccccgttctctctcttcctcctattccagcctcagaagacgttcctgctttccctccaccttccgccatgattgt--gtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccgtgagtcagttaaacctctttcctttataaattacccaatctcaggtaggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342466 467 + 51301725 gatg-gaaaatatTAAGCATAGGAATGA--------------------ATACTTGA-ATATATGTTTGTGTCTACATATGTACATagtacatatattcatataaaatatatgtgattaaCATGGCTTATGAAATATATGTGATTAACATGGTTTGCATTTGTGTCCCTttgaaatctcatgttgaatcttaatccccagtgttggaggagaggcccagtgggaggtaactggtTCGTGGGAGCCgacttcccccttgctgctctcgtgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccctgttctctctcttcctcctattCCAGCCATAGAAGACGTGCCTGCTTTCCCtccaccttccgccatgattgt--gtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccatgagtcagttaaacctctttcctttataaattacccaatctcaggtaggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47024744 465 + 50890351 GATG-AAAAATATTAAGCATAGGAATGA--------------------ATACTTGA-ATGTATGTTTGTGTCTATATATGTACATAGTGCATATATTCATATAAAATATATGTGATTAACATGGCTTATAAAATATATGTGATtaacatggtttgcatttgtgtccctttgaaatctcatgttgaattttaatccccagtgttggaggagaggcccagtgggaggtaactggttcgtgggagccgacttcccccttgctgctctcgtgatagtgagttgtcatgagatcttgttatttaaaagtgggcaacacctccctgttctctct----ctcctattccagccatagaagacgttcctgctttccctccaccttccgccatgattgtaagtttcctgaggcctccccagccatgcttcctgtatggcctgtggaaccgtgagtcagttaaacttctttcctttataaattacccaatctcaggtaggT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45559966 455 + 49145316 GATGAAAAAATATTAAGCATAGGAATGAATGAAATATTAAGTATTCCTATGCTTAATACTTATGTGTGTGTCTGTGTAGGTTCATAACACATATATTCA---------------------------TATAAA--ATATGTGATtaacatggtttgcatttgtgtccctcccaaatctcatgttgacttgtaatccccat------aggaggggcccaatgggaggtgattggatcatgggagcggacttcccccttgctgctctcctgatagtgatccgtcacgagatcttgttattt-aaagtgggtagcacctcccccttctctctcttcctcctattccagccatataagatgtgtctgcttcccctccaccttctgtcatgatggaaagcttcccgaggcctccccagccatgcttcctgtatggcctgcagaatcgtgagtcagtgaatcctcattgctttataaattacccagtctcaggtagtt i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=479320.000000 s hg38.chr19_GL949753v2_alt 316989 321 + 796479 ttttgtttgtttgtttgtttgtttgtttttgagacggagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcactgcagcctctgcctct-gggttccagcgattctcctgcctcagcctccaaggcagttgggatt-caggtacccgccaccatgcccagctaattttt--gtatttttagtagagatagggtttcgccatgttggccaggctggtctttcattcctgacctcaggtgatcggcccacctcggcctcccaaagtgctgggattacaggcgtgagccatcgtgcccggcc--tcaggtagttc s panTro4.chr19 59269074 317 + 63644993 t----tttgtttgtttgtttgtttgtttttgagacggagtgttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcactgcagcctctgcctcc-gggttccagcgattctcctgcctcagcctccaaggcagttgggatt-caggtacccgccaccacgcccagctaattttt--gtatttttagtagagacggggtttcgccatcttggccaggctggtctttcactcctgacctcaggtgatcggcccacctcggcctcccaaagtgctgggattacaggcgtgagccattgtgcccggcc--tcaggtagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126346 308 + 60714840 ---------------tgtttgtttgtttttgggacagagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcagctcgctgcagcctctgcctcctgggttccagtgattctcctgcctcagcctccggggtagttgggattacaggcgctcgccaccacacccagctaattttt--gtatttttagtagagacggggtttcgccatgttggccaggctggtctttaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgcggggattacaggcgtgagccatcatgcccggcc--tcaggtagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102888854 312 - 106955855 -----------tgtgtgtttgtttgtttttgagacagaatcttgctctgtcccccaggctggagtgcagtggtgtgatctcagctcactgcagcctctgcctcccgggttccagtgattctcctgcctcagcctccggggtagttgggattacaggcacccgccgccacgctcagctaattttt--gtatttttagtagagacggggtttcgccatgttggccaggctggtctttcactcctgacctcaggtgatcagcccacctcggcctcccaaagtgctcggattacaggcgtgagccatcgtgcccggcc--tcaggtagttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55235623 315 + 59248254 t--------tttgtttgtttgtttgtttttgagacagagtctttgtctgtcccccgggctggagagcaatggtgcgatctcagctcgctgcagcctctgcctcccaggttccagagattctcctgcctcagcctcctgggtagttgggattacaggcacctgccaccacgaccagctaattttt--gtatttttagtagagacagggttttgccatgttggccaggctggtctttaactcctgacctcaggtgatccgcctgccttggcctcccaaagtgctgggattacaggtgtgagccatcgtgcccagcc--TCAGGTAGttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47342933 324 + 51301725 ttctgtttgtttgtttgtttgtttgtttttgagactctgcctcactctgtcgcccaggctggagtgcagtggcgcgatctcaggtcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcc-accaccacgccgggctaattttttcgtatgtttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctca--tgagccacccgcctcggcctcctaaagtgctgggattacagatgtgagccaccgcgtctggcctatcaggtagttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025209 325 + 50890351 Ttttgtttgtttgtttgtttgtttgtttttgagactccgcctcgctctgtcacccaggctggagtgcggtggcgcgatctcaggtcactgcaagctctgcctcccaggttcacaccattctgctgcctcagcctcccaagtagctgggactgcaggcacccgccaccacacccggctaattttttcgtatgtttagtagagacggggttttaccatgttagccaggatggtctcgatctcctgacctca--tgagccacccgcctcggcctcctaaagtgctgggattacaggcgtgagccaccgcgtctggcctatcaggtagttt i chlSab2.chr6 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45560421 0 + 49145316 C e rheMac3.chr19 60147681 665 + 64156825 I a score=7644.000000 s hg38.chr19_GL949753v2_alt 317310 3 + 796479 ttt s panTro4.chr19 59269391 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126654 3 + 60714840 ttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889166 3 - 106955855 ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55235938 3 + 59248254 ttt i macFas5.chr19 C 0 I 779 s papAnu2.chr19 47343257 3 + 51301725 ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025534 3 + 50890351 ttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560421 3 + 49145316 ttt i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=55953.000000 s hg38.chr19_GL949753v2_alt 317313 32 + 796479 acagcagtgtgagaacagatgaatacaATGAT s panTro4.chr19 59269394 32 + 63644993 atagcagtgtgagaacagatgaatacaatgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126657 32 + 60714840 atagcagtgtgagaacagatgaatacaatgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889169 32 - 106955855 atagcagtgtgagaacagatgaatacaatgat i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47343260 32 + 51301725 atagcagtgtgagaacagatgaatacaATGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025537 32 + 50890351 atagcagtgtgagaacagatgaatacaATGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560424 32 + 49145316 ctatcagtgtgagaacagactcatataATGAT i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e macFas5.chr19 55235941 779 + 59248254 I e rheMac3.chr19 60147681 665 + 64156825 I a score=81095.000000 s hg38.chr19_GL949753v2_alt 317345 50 + 796479 TATAGATACATATGTATACGTGGCTTTAGATATTTGTTTTTAAAGTATAT s panTro4.chr19 59269426 50 + 63644993 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126689 50 + 60714840 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889201 50 - 106955855 tatagatacatatgtatatgtggctttagatatttgttttaaaaatatat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55236720 23 + 59248254 --tatatatatatatatatat-------------------------atat i macFas5.chr19 I 779 I 1 s papAnu2.chr19 47343292 49 + 51301725 Tgtagatacatatgtatatgtggctttagatatttgttttaaaaa-atat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025569 49 + 50890351 TGTAGATACGTATGTATTTGTGGCTTTAGATATTTGTTTTAAAAA-ATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560456 50 + 49145316 TATAGATGCATATGGATATGGGGCTTTAGAGATTTGtttttaaaaaatat i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e rheMac3.chr19 60147681 665 + 64156825 I a score=253798.000000 s hg38.chr19_GL949753v2_alt 317395 94 + 796479 ATGTAAC--TACGTATATATTCATATTTGAGATGAGAAAGATGGGCTTACAATTTGGAAATATAAACGTGAAATTTCCAATTTTTTATGGCTGATA s panTro4.chr19 59269476 77 + 63644993 atgtaac--tacatatatattcatatTTGAGGTGAGAAAGATGGGC-----------------AAATGTGAAATTTCCAATTTTTTATGGCTGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126739 93 + 60714840 atgtaac--tatatatatattcatatTTGAGGTGAGAAAGATGGGCTTACAATTTGGAAATATAAACATGAAA-TTCCAATTTTTTATGGCTGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889251 94 - 106955855 atgtaac--tacgtatatattcatatCTGAGGTGAGAAAGATGGGCTTATAATTTGGAAATACAAATGTGAAATTTCCAATTTTTTATGGCTGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148346 94 + 64156825 atgtaac--tacatatatattcataGTTGAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i rheMac3.chr19 I 665 C 0 s macFas5.chr19 55236744 94 + 59248254 ATGTAAC--TACATATATATTCATAGTTGAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47343341 94 + 51301725 atgtaac--tacatatatattcatagttGAGGTGAGAAAGAGGGGCTTACAATTTggaaatataaaagtgaaatttcCAGTTTTTTATGGTTGATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025618 94 + 50890351 ATGTAAC--TACATATATATTCATAGTTAAGGTGAGAAAGAGGGGCTTACAATTTGGAAATATAAAAGTGAAATTTCCAGTTTTTTATGGTTGATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45560506 96 + 49145316 atgtaactatatatatatattCATATTTGAGATGAAAAAGATGGGCTTACAATTTCGAAACATAAAAGCGAAATTTCTAATTTTTTATGGCTGACA i calJac3.chr22 C 0 I 1693 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I a score=10192.000000 s hg38.chr19_GL949753v2_alt 317489 4 + 796479 TAAA s panTro4.chr19 59269553 4 + 63644993 TAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126832 4 + 60714840 TAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889345 4 - 106955855 TAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148440 4 + 64156825 TAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55236838 4 + 59248254 TAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343435 4 + 51301725 TAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025712 4 + 50890351 TAAA i chlSab2.chr6 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I e calJac3.chr22 45560602 1693 + 49145316 I a score=1023963.000000 s hg38.chr19_GL949753v2_alt 317493 378 + 796479 CATCAGCCCCAGCATCTTCCCCTTGTTCATGTCAGGCCTGGACCCCCGGACCCCAAATCCCGCTCAGGTAGGGGAGGACAGACCTGACTCCTCCACCTATCATTGCTG---------CTCCCTTCTTCCTGCCTGGTTCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCTCCATCCTCAGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGTTCCTCTGAGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGATGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCACGGGGTCAGGACTTAGAGGCTGGGGACACCCAGATGTTGAT s panTro4.chr19 59269557 378 + 63644993 CATCAGCCCCAGCATCTTCCCCTTGTCCACGTCAGGCCTGGACCCCCGGACCCCAAATCCTGCTCAGGTAGGGGAGGACAGACCTGACTCCTCCACCTATCATTGCTG---------CTCCCTTCTTCCTGCCTGGTTCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCTCCATCCTCAGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGTTCCTCTGAGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGATGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCACGGGGTCAGGACTTAGAGGTTGGGGACACCCAGACGTTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56126836 387 + 60714840 CATCAGCCCCAGCATCTTCCCCTTGTCCACGTCCGGCCTGGACCCCCGGACCCCAAATCCTGCTCAGGTAGGGGAGGACAGACCTGGCTCCTCCACCCGTCATCGCTGCTCCCTCCTCTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGGACACCTGCTCCATCCTTGGAGCCCCAGGAAGCCACGTGGACCACGCCCTTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTTGGGGACACCTAGACGTTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889349 378 - 106955855 CATCAGCCCCAGCATCTTCCCCTTGTCTACGTCAGGCCTGGACCCCCGGACCCCGAATCCTGCTCAGATAGGGGAGGACATTCCTGGCTCCTCCACCTATCATCACAG---------CTCCCTCTTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACGCCTGCTCCATCCTTGGAGCCCCAGGAAGCCACATGGACCACACCCTTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTGAGAGTAACTGTGCTTTCATCTCCCATGGGGTCAGGACTTACAGGTTGGGGACACCCAGACTTTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148444 358 + 64156825 ---CAGCCTCAGCGTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCGGGACCCCAAATCCTGCTCAGATAGAGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTTTTGTCCACTCTCCCCTCTGCT----------------CCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGTTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55236842 358 + 59248254 ---CAGCCTCAGCGTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCGGGACCCCAAATCCTGCTCAGATAGAGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCTCCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTTTTGTCCACTCTCCCCTCTGCT----------------CCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGTTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343439 376 + 51301725 CATCAGCCTCAGTGTCTTCCCCTTGTCCACGTCAGGCCTGGACCCC-AGACCCCAAATCCTGCTCAGATAGGGGAGGACAGACCTAGCTCTTCTGCCCATCATCGCTG---------ccccctccttcctgcctggTCCTAGGacacctccctcccctctgaCCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCACAGGAAGCCACGTGGACCATGCCCCTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAATAGACCCCTTTCCTGAATATTGGAGATAAGGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GAGACACCTAGACGTTGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47025716 366 + 50890351 ---CA--------GTCTTCCCCTTGTCCATGTCAGGCCTGGACCCCCGGATCCCAAATCCTGCTCAGATAGGGGAGGACAGACCTAGCTCCTCTGCCCATCATCGCTG---------CTCCCACCTTCCTGCCTGGTCCTAGGACACCTCCCTCCCCTCTGACCACCACAGAGGGAACACCTGCCCCATCCTCGGGGCCCCAGGAAGCCACGTGGACCATGCCCCTATTGTCCACTCTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCTGAATATTGGAGATAAAGTTGAGACGAGTCTAGAATATTATACTGGGTCAGAGTAACTGCGCTTTCATCTCCCATGGGGTCAGGACTTAGAGGTT-GGGACACCCAGACGTTGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562295 308 + 49145316 CATCAGCCCCAGCATCTTCCCCTTGTCCAAGTCAGGCCTGGACCCC---------AAACCTGCTCAGGTAGGGGAGGA----CCTGGCTTC---ACCCATCATCACTG---------CTCCCTCCTTCCTGCCTGGTCCCAGGAAACATCCCTCCCCTCTGAGCACCATGGAGGGAACAGCTGCCCCATCCTTGGA--CTCAGGGAGCCATGTGGACCACACCCTTACTGTCCACCTTCCCCTCTGCTCCTCTGGGGAACAGACCCCTTTCCCAAATATTGGAGATAAGATTGAGACAAGTGTAGAATATTATGCTGGGT----------------------------------------------------CACCCAGACATTGAA i calJac3.chr22 I 1693 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19739701 4108 - 122678785 I a score=474165.000000 s hg38.chr19_GL949753v2_alt 317871 163 + 796479 TCTGAGATGGAGACATCAGGAAGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCCCACCTGCTTG--CAGCCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC s panTro4.chr19 59269935 163 + 63644993 TCTGAGATGGAGACATCAGGAAGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCCCACCTCCTTG--CAGCCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC i panTro4.chr19 C 0 I 416 s ponAbe2.chr19 56127223 163 + 60714840 TCTGAGATGGAGACATCAGGACGGGAGCAGGTGGGGCCTCCATCTTCCACCCTCAGTCTAATCTCATCTCCTCTAAGGCTCACCTCCACCTCCTTG--CAGCCCTCTCCACTCTTTAC-GCTACTGAGACTTCAGGGGTGGGAGCCCAGGGTGGGAAGTCCTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889727 163 - 106955855 TCTGAGATGGAGACATCAGGAGGGGAGCAGGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCAAGGCTCACCCACACCTCCTTC--CAGCCCTCTCCACTCTTTAC-CCTGCTGAGACTACAGGGGTGGGAGTCTGGGGTGGGAAGTCCTCATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148802 163 + 64156825 TCTGAGATGGAGACATCAGGAGCAGAGCGTGTGGAGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCCGGGTGGGAAGTCCCCATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237200 163 + 59248254 TCTGAGATGGAGACATCAGGAGCAGAGCGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCCGAGGCTCACTCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCCGGGTGGGAAGTCCCCATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343815 163 + 51301725 TCTGAGATGGAGACATCAGGAGGGGAGCGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTCTGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCCACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCAGGGTGGGATGTCCCCATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026082 163 + 50890351 TCTGAGATGGAGACAGCAGGAGGGGAACGTGTGGGGCCTCCGTCTTCCACCCTCAGTCTAATCTCATCTCCTGCGAGGCTCACCCCCACCTCCTTC--CAGTCCTCTCTACTCTTTAC-CCTACTGAGACTTCAGGGCTGGGAGCCCAGGGTGGGAAGTCCCCATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562603 142 + 49145316 TCTGAGGTGGAGACATCAGGAGGGGAGTGCGTGGGG---------------CTCAGTCTAATCTCATCTCCTCTGAGGTTCA-TCCCATCTCCTCC--CAGCCCTCCCTACTCTTTAC-CCTACTGCAATTTCAGGGGTGGGAGCCAGGGGTGGAAGGTCC----- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19743809 133 - 122678785 TCTGATATGGAGGCACAAACAAAGGTTTGTGGGAGACCTGTGTCT----------ATTCAGGATCATCCTC------GCTCACCCACCTCTCATGCAGCAGC-----CTACTCCTTACTTCTGCTGAGACTGAAGAATGGGGGACCCCAGGTGG------------ i canFam3.chr1 I 4108 C 0 e mm10.chr7 3838552 2339 + 145441459 I a score=263480.000000 s hg38.chr19_GL949753v2_alt 318034 126 + 796479 TATTTCCACACTCCCATAGGCTGGACCTTCCCCTCGGTGGGAGGTTCCCATGTATTTCCACCCTTCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC s panTro4.chr19 59270514 126 + 63644993 TATTTCCACCCTCCCATAGGCTGGACCTTCCCCTCGGTGGGAGGTTCCCATGTATTTCCACCCTTCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC i panTro4.chr19 I 416 C 0 s ponAbe2.chr19 56127386 126 + 60714840 TATTTCCACCCTCCCATGGGCTGGACCCTCCCCTGGGTGGGAGGTTCCCGTGTATTTCCACCTTCCCATGGGCTGGGCCCTCCCCTGTGGACCCTCCCCCTTCACTGTCCTGT-TTTCTTAGTGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889890 74 - 106955855 ----------------------------------------------------TATTTCCACCCTCCCATGGGCTGGACCCTCCCCTGTGGACCCTCACCCTTCACTCTCCTGT-TTTCTTAGTGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60148965 125 + 64156825 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTGGGAGGTTCCTGTGTGTTTCCACCCTCCCATGGGCTGGGCCCTCCCCCGTGGACCCTCCCCCTTCACGCTCCTGT-TTTTCTAGTGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237363 125 + 59248254 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTGGGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGGACCTCCGCTGTGCACCTTCCCCCTTCACGCTCCTGT-TTTCTTAGTGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47343978 111 + 51301725 TATTTCCACACTCCCCT-GGCTAGACCTTCCCCTGGGTCAGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGg--------------ccctcccccttcactctcctGT-TTTCCTAGTGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026245 125 + 50890351 TATTTCCACACTCCCCT-GGCTAGACCCTCCCCTGGGTGGGAGGTTCCTGTGTATTTCCACCCTCCCATGGGCTGGGCCCTCCCCCGTGGACCCTCCCCCTTCACGCTCCTGT-TTTTCTAGTGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562745 78 + 49145316 ------------------------------------------------CATCTATTTCTACCCTCTCATTAGCTGAACCCTCCCCTGTGGACCCTCCCCCTTCACTCCCCTCA-ATCCTTAGTGTCC i calJac3.chr22 C 0 I 3 s canFam3.chr1 19743942 79 - 122678785 -----------------AGGCTGTAGCTT-------------------------TTTCCACTCTCTCCTGGGCTGGACCCTCCTCTGTGGAGCCTCC-----AATGCTCCTACATCTCTTACTGAA- i canFam3.chr1 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I a score=8208.000000 s hg38.chr19_GL949753v2_alt 318160 3 + 796479 TGA s panTro4.chr19 59270640 3 + 63644993 TGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127512 3 + 60714840 TGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889964 3 - 106955855 TGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149090 3 + 64156825 TGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237488 3 + 59248254 TGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344089 3 + 51301725 TGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026370 3 + 50890351 TGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19744021 2 - 122678785 -GG i canFam3.chr1 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e calJac3.chr22 45562823 3 + 49145316 I a score=93605.000000 s hg38.chr19_GL949753v2_alt 318163 28 + 796479 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA s panTro4.chr19 59270643 28 + 63644993 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127515 28 + 60714840 ACTCTCCTGGGG-GCCGGGCCTGAGCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889967 28 - 106955855 ACTCTCCTGGGG-GCAGGGCCTGAGCTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149093 28 + 64156825 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237491 28 + 59248254 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344092 28 + 51301725 GCTCTCTTGGGG-GCAGGGCCTGCACTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026373 28 + 50890351 GCTCTCTTGGGG-GCAGGGCCTGCGCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562826 28 + 49145316 GCTCTCCTAGGG-GCAGGGCCTGAACTGA i calJac3.chr22 I 3 C 0 s canFam3.chr1 19744023 29 - 122678785 ACTTTCCTGAGATGTGGGTCCTGAGCTGG i canFam3.chr1 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 318191 1 + 796479 G s panTro4.chr19 59270671 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127543 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889995 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149121 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237519 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344120 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026401 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562854 1 + 49145316 G i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19744052 0 - 122678785 C a score=51068.000000 s hg38.chr19_GL949753v2_alt 318192 21 + 796479 AGAGGCTCCGGGCTCACAAAG s panTro4.chr19 59270672 21 + 63644993 AGAGGCTCAGGGCTCACAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127544 21 + 60714840 AGAGGCTCAGGGCTCAGAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102889996 21 - 106955855 AGAGGCTCAGGGCTCAGAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149122 21 + 64156825 AGAGGCTCAGGGCTCAGAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237520 21 + 59248254 AGAGGCTCAGGGCTCAGAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344121 21 + 51301725 AGAGGCTCAGGGCTCAGAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026402 21 + 50890351 AGAGGCTCAGGGCTCAGAGAG i chlSab2.chr6 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19744052 0 - 122678785 C e calJac3.chr22 45562855 0 + 49145316 C a score=246394.000000 s hg38.chr19_GL949753v2_alt 318213 91 + 796479 GCCGGGGCTGATGGAGGAAGAAGTGGGG-CAGCAAGTGAGAC---AGACAGACGGACACTCTCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC s panTro4.chr19 59270693 91 + 63644993 GCCGGGGCTGATGGAGGAAGAAGTGGGA-CAGCAAGTGAGAC---AGACGGGCGGACACTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127565 91 + 60714840 GCCGGGGCTGATGGAGGAAGAAGTGTGG-GGACAAGTGAGAC---AGACGGATGGACACTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890017 91 - 106955855 GCCCGGGCTGATGGAGGAAGAAGTGTGG-GGGCGAGTGAGAC---AGACAGATGGACACTCCCTTGGAACCTCTCCTTTTTCATTTCCAAGAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149143 92 + 64156825 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AGACGGACGGACATTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237541 92 + 59248254 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AAACGGATGGACATTCCCTTGGAAGCTCTCCTTTTTCATTTCCAAGAACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344142 92 + 51301725 GCTGGTGCtgatggaggaagaagaggagtggGCAAGTGAGAC---AGACGGACGGACATTCCCTTGGAAgctctcctttttcatttccaagAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026423 92 + 50890351 GCTGGTGCTGATGGAGGAAGAAGAGGAGTGGGCAAGTGAGAC---AGACGGGCGGACATTCCGTTGAAAGCTCTCCTTTTTCATTTCCAAGAACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3583008 95 - 49145316 GCTGGGGCTGATGGAGGAAGAAGAGATGTGGGCAAGTTGGACGGAGGACAGATGCATGCTCCCTTGGAAGCTCTCATTTTTAATTTCCAAGAGCC i calJac3.chr22 n 0 n 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19744052 0 - 122678785 C a score=7802.000000 s hg38.chr19_GL949753v2_alt 318304 3 + 796479 CCT s panTro4.chr19 59270784 3 + 63644993 CCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127656 3 + 60714840 CCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890108 3 - 106955855 CCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149235 3 + 64156825 TCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237633 3 + 59248254 TCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344234 3 + 51301725 TCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026515 3 + 50890351 TCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562855 3 + 49145316 CCT i calJac3.chr22 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I e canFam3.chr1 19744052 0 - 122678785 C a score=15831.000000 s hg38.chr19_GL949753v2_alt 318307 5 + 796479 TTGAG s panTro4.chr19 59270787 5 + 63644993 TTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127659 5 + 60714840 TTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890111 5 - 106955855 TTGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149238 5 + 64156825 TCGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237636 5 + 59248254 TCGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344237 5 + 51301725 TCGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47026518 5 + 50890351 TCGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562858 5 + 49145316 TTGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19744052 5 - 122678785 TGGAG i canFam3.chr1 C 0 C 0 e mm10.chr7 3838552 2339 + 145441459 I a score=1784328.000000 s hg38.chr19_GL949753v2_alt 318312 519 + 796479 CTCAGAGTGGACAGGGTCAGCG--CCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGCTCCGTACATTGATCTCAGACGCAACGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGTCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACCGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCTGTCAGAGATCTGTCCTGGAGAAAAGAAGGACGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCTCCCCACCAGTCCTCTCCCTGGGACCCTCAG----TCTGTCTCTGTCTTCTCTGAGTCTCCCCCTCCCC------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT-CTCCCTCCCTTAGG-ACCCCCACCCCTCATGCCGGCCATCACC s panTro4.chr19 59270792 518 + 63644993 CTCAGAGAGGACAGGGTCAGCG--CCCTCACCTGAGACCACAAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCTGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTTATGAGCTCTGTAAGTGGATCTTAGATGCAACGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGCCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCGGCTGCACTGAGAGGGAGGGTCTGTCAGAGATCTGTCCTGGAGAGAAGAAGGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCTCCCCACCAGTCCTCTCCCTGGGACCCTCAG----TCTGTCTCTGTCTTCTCTGAGTCTCGCC-TCCCC------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT-CTTCCTCCCTTGGG-ACCCCCACCCCTCATCCCGGCCATCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56127664 522 + 60714840 CTCAGAGAGGACAGGGTCAGGG--GCCTCACCTGAGACCACGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------CATCAGCTGCCCCCTCCTTGGTCAGCAGGAAAGTGAACATCGGGCCCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCAGCTGCACCGAGAGGGAGGGTCTGTCAGAGATCTGTCCTAGAGACAAGAAGGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACTTCTCCACCAGGCCTCTCTCTGGGACCCTCAGTCTCTCTGTCTCTGTTTTCTCTGAGTCTCCCC-TCCCC------GCCCATCCCCTGTCTCTCTC------------------------------------------------------------------------------------------------TGTGT-CTTTCTCCCTTAGG-ACCCTCACCCCTCATCCAGGCCATCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890116 612 - 106955855 CTCAGAGAGGACAGGGTCGGGG--CCCTCACCTGAGACCATGAGCTCCAGGGGCTCACTGGGGTGAGACAGCAGGTAGGGGTTGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCTGCGTGGGCCGAGGTCACAGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGTGGGG-----------------------GATGGGCTGCCCCCTCCTTGGTCAGAAGGAAAGTGAACATCGGGCTCCATGACTGACACAGCAGGGTCACCTTCTCTCCTGAGGTCACTGTGGGGCCCAGCTGCACCGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAAGATGGGTGAGGGGCTGCCCCACCTTGTTCTGAGCTGAGACCCCCCCACCAGGCctctctctgggaccctcagtctctctgtctctgttttctctgagtctcccc-tcccc------gcccatcccctgtctctctctctctctctctctctctctctgtgtatgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt-CTTTCTCCCTTGGG-------ACCCCTCATCCCGGCCATCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149243 500 + 64156825 CTCAGAGAGGACAGGGTCAGGG---CCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAGGATGGGTGAAGGGTTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCC------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT-TTCCTTCCCTTGGGAACTCCCCGCCCCCATCCCGGCCATCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55237641 501 + 59248254 CTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCGAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTAGAGACAAGAAGGATGGGTGAAGGGTTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCT------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT-TTCCTTCCCTTGGGAACTCCCCGCCCCCATCCCGGCCATCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47344242 500 + 51301725 CTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGGTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCAAGGTCACGGGACTCATGGGGAATTCAGCCTGGTACTGCTGAGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAGCAGGGTCACCTTCTCTCCtgaggccaccgtggggcccaGCTGCACTGAGAGGGAGGGTCTGTCACGGATCTGTCCTAGAGACAAGAAGAAT-GGTGAAGGGTTGCCCCACCTTGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTctcccc-tcccc------gcccatcccctgtctctgtc------------------------------------------------------------------------------------------------tgcct-ttccttcccttgggaactccccgcccccATCCCGGCCATCACC i papAnu2.chr19 C 0 M 409 s chlSab2.chr6 47026523 501 + 50890351 CTCAGAGAGGACAGGGTCAGGG--CCCTCACCTGAAACCACGAGCTCCAGGGGCTCACTGGAGTGAGACAGCAGGTAGGGTTCGGAGCTGCGTGAGCCGTAGCACCTGTAGGTCCCCGCGTGGGCCAAGGTCACGGGACTCATGGGGAACTCAGCCTGGTACTGCTGGGCTCTGTAAGTGGATCTTAGACGCAGCGGGG-----------------------GATGGGCTGCCCCCTCCTTGGCCAGAAGGAAAGTGAACATCGGACCCCATGACTGACACAACAGGGTCACCTTCTCTCCTGAGGCCACCGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTGTCAGGGATCTGTCCTGGAGACAAGAAGGATGGGTGAAGGGCTGCCCCACCTCGTTCTGAGCTGAG---CCACCCCCAGGCCTCTCTCTGGGACCCTCAG-------------------TCTGAGTCTCCCC-TCCCC------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TGTCT-TTCCTTCCCTTGGGAACCCCCTGTCCCCATCCTGGCCATCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45562863 504 + 49145316 CTCAGAGAGGACAGGATCAGGG--CCCTCACCTGAGACCACAAGCTCCAGGGGGTCACTGGGGTGAGACAGCAGGTAGGGGCTGGAGCTGTATGAGCCATAGCACCTGTAGGTCCCTGCATGGGCTGAGGTTACAGGA---ATTTGGAATTCAGCCAAGTACTGTTGAGCTCTGTAAGTGAATCTTAGACGCAGCAGGG-----------------------GATGGGCTACCCCCTCTTTGGTCAGAAGGAAACTGAACATTGGGCTCCGTGACTGACACAGCAGGGTCACATTCTCTCCTGAGGCCACTGTGGGGCCCAGCTGCACTGAGAGGGAGGGTCTCTCAGGGATCTGTCCTGGAGAGAAGAAGGAT-GGTGAGGGGATGCCCCACCTTGTTCTGAGCTGAG---ACCTCCCCAGGCCTCTCTCTGGGACCCTCAG--------TCTCTGTCTTCT----GTCTCCCCCTCCCC------GCCCATCCCCTGTCTCTGTC------------------------------------------------------------------------------------------------TCTCC-CTCCCTCCCTTGGG-ACCCCCACCCCTCATCCCAGCCATCACC i calJac3.chr22 C 0 C 0 s mm10.chr7 3840891 504 + 145441459 CTCTGAGAAGTCAGGATCA------CCTTACCTGAGACTGTGAGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATGAGTCTTGAGCTCCATAGCACCTGTAGGTGCCTGAGAGATGGGAGGTCACAGCACTCATGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTTGATTTTAGTCGCAGGGGTT-----------------------GCTGGGCTGATCCCTCCTTGGACAGAATGAAAGTATCCACAGAGTCCATTGACCAACACAGCAGGCTCACGGTCTCTCCTGAGTGCACTGTGTGGTTAGGCTGCACTGAGAGGGAAGGAGTGAGAGGGAGCTGTCCTAAAGAGAAGAGGCAT-GATGAGAGGCTAGCTT-CCTTGTTCTGAGCTCCA---ATCACACATGACTCCACCCTGAGAACCTGGG-------------------CCTCTGTCTCTTT-TCTCTGACTGAGCTCAACTCCTGTTCTCATC------------------------------------------------------------------------------------------TTCTTGTGTCT-ACTCCTGCTTAGGA---TTCCTGTGTCCATGCTGGCCATAAGC i mm10.chr7 I 2339 I 16 s canFam3.chr1 19744057 501 - 122678785 CTCAGACAGGAAAGGGTGAGGGGGCCCTCACCTGAGACCAGGAGCTCCCAGGGGTCACTGGGATGTGACAATAGCTAAGAGGAGGTGTTGGATGAGCCGTAGTACCTGTAGGTTCCCCCACAGGCTGAGGTCACGGGACTCAGGGAGAATTCAGCCTGGTACAGCCCATCTTGGTAC-----TTTAAAATGCAGTCGGGGGGCTGGGGGTAGTAGTAGGAGAGATAAGCTGCCCCCTCCTTGAACAGAAGGAAAGTGTTCA-CAACCCTCCTGTCTGA-ACCACAGGGTCACATTCTCACCTGGGGCCACCGTG-GGCCCGGCTGCCCCCAGAGGAAGAGTGTGTAGGGGAACTGTCCTAGAGAGAGGAAGGGTGGGTGAGGGGTGGTCCAGCCTTGGCCTGACCTGAG----------------tctgtctgtgtcc------------------------tctgagtctctcc-catct--------ccatctcttgtctctctc----------------------------------------------------------------------------------------------tctgtctcCTCCCTCCCTGGGGACCTCACACCCCTGGCCCTGGCCACCATC i canFam3.chr1 C 0 C 0 a score=323431.000000 s hg38.chr19_GL949753v2_alt 318831 99 + 796479 ACCTGGGCT-CCCCCAGCAGG-GCCTGTGCAGAGCCTGGGTCCCCCTGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG s panTro4.chr19 59271310 97 + 63644993 ACCTGGGCT-CCCCCAGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128186 97 + 60714840 ACCTGGGCT-CCCCCGGCAGG-ACCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890728 97 - 106955855 ACCTGGGCT-CCCCTGGCAGG-ACCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149743 98 + 64156825 ACCTGGGCTCCCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238142 98 + 59248254 ACCTGGGCTCCCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTCCC--TGACTGAACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47027024 95 + 50890351 ACCTGGGCT-CCCCCGGCAGG-GCCTGTGCAGAGCCTGGGTGCC--TGAC--AACCCGCTGGGCTCCTCACCTGCGATCAGGATGTCCAGGGGGTCGCTGG i chlSab2.chr6 C 0 I 8559 s calJac3.chr22 45563367 97 + 49145316 ATCTGGGCT-CCCCCAGCAGG-GCCTGTACAGAGCCTGGGTCCC--TGACTGAACCTGCTGGGCTCCTCACCTGAGATCAGGACGTCCAGGGGGTCACTGG i calJac3.chr22 C 0 C 0 s mm10.chr7 3841411 97 + 145441459 CCCCGCCCC-ACCCCATTAGA-GCCTGAGCAGAGGCTAGGTTCC--TGATTGAGTCTGTTAAGTTACTCACCTGTGATCAGGATGTCCAGGGGCTCACTGG i mm10.chr7 I 16 C 0 s canFam3.chr1 19744558 96 - 122678785 ACCTGGGAT-TCCCTCACAGGAACCTGTGCAGAGTCTGGGGCCT--TACCTGCACCCAT--GGCCCCTCACCTGCGATCAGGATGTCTAGGGGTTCACTGG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47344742 409 + 51301725 M a score=750697.000000 s hg38.chr19_GL949753v2_alt 318930 234 + 796479 GGGCCGACCACTCGGAGGAGACGTTGTGTGCGCCGTAGCATCTGTACTGGCCCCCGTAGGAGCGGCTCACAGGGCTCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGGGGAGGCCATCGGCCCCCTCCTTGTACAGAGTGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT s panTro4.chr19 59271407 234 + 63644993 GGGCCGACCACTCGGAGGAGACGTTGTGCGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCGGCTCACAGGGCCCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCCGGCCAGGGCGCTGGGCGAGGCCATCGGCCCCCTCCTTGTACAGAGTGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128283 234 + 60714840 GGGCCGACCACTCGGAGGAGATGTTGTGTGCACCGTAACATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGCTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGGCTGCTGGCCAGGGCGCTGGGGGAGGTCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCAACATCAGAGCCACACTGGAGGGTCAGATTCTCTCCGGGGGTCACGACAGGGCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102890825 234 - 106955855 GGGCCGACCACTCGGAGGAGACGTTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGCCCAGGGTGAAGTTGGCCTG----GGAGAGCCCAGCCTGAGGCTGCCGGCCAGGGCACTGGGGGAGGTCATCGCCCCTCTCTTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGCAGGGTCAGGTTCCCTCCAGGGGTCACGACAGGGCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60149841 234 + 64156825 GGGCCGACCACTTGGAAGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGTTCTCTCCGGGGGCCACGACAGGGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238240 234 + 59248254 GGGCCGACCACTTGGAGGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAGGTTGTCTCCGGGGGCCACGACAGGGCCCT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47035678 234 + 50890351 GGGCCGACCACTCGGAGGAGACATTGTGTGCACCGTAGCATCTGTACTGGCCCCCGTGGGAGCCCCTCACAGGGTTCAGGGTGAAGCTGGCCTG----GGAGAGCCCAGCCTGGGACTGCTGTCCAGGGCGCTGGGGGAGGCCATCGCCCCCCTCCTTGTACAGAGCGTATCTGATGTAGCCGACATCAGAGCCACACTGGAGGGTCAAGTTCTCTCCAGGGGCCACGACAGGGCCCT i chlSab2.chr6 I 8559 C 0 s calJac3.chr22 45563464 234 + 49145316 GGGCTGACCACTCGGAGGAGACGTTGTGGGCACCGTAGCATCTGTACTGGCCCTCGTGGGAGACCCTCACAGGGCTCAGGGTGAAGTTGGCCTG----AGAGAGCCCAGCCTGGGACTGCTCTCTAGGGCGCTGGGGGAGGACATCACCCCCCTCCTTGTACAGAGCATAGCTGACGTACCCGACATCAGAGCCACATTGGAGGGTCAGGTTCTCTCCGGGGGCCACAATGGGGCTCT i calJac3.chr22 C 0 C 0 s mm10.chr7 3841508 234 + 145441459 AGGCTGACCACTCAGAGGAGAGGTTGTGTGCACCATAGCATCTGTATTGGCCTCCAGTGGAGCTACTCACATAGCCCAGTGTGAAGTTGGCCAC----AGAGAAGCCAGTGTCAGTCTGCTGGCTAGAGTGCTGCATGATGTCAGCTCTCCCCACCTTGTGCAGAGCATATCTGTCATAGTTGATGTCAGAGAAACACTGCAGGGTGAGGGTCATTCCAGGGTCCAGGGTATGGCCTT i mm10.chr7 C 0 C 0 s canFam3.chr1 19744654 225 - 122678785 GGGCCAACCACTGGGAGGAGAGGTTGT--TCACCATAGCATGGGTACCAGCTCCTGTGGAAGGGTCTCACTGGGCCCAGGGGGAAGGAAGTCTGCTCCAGAGAGCCAAGCCTGGGACTGCCGGCCATGACACTGGGAAGGGCCA-CATGCCCCTCCTTGGACAGAGCAAATCTGTCATAGCCAACATCAGAGAGGCACGGGAGAG----------TCCAGAGGTCACAACAGGGCTCT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47344742 409 + 51301725 M a score=564990.000000 s hg38.chr19_GL949753v2_alt 319164 189 + 796479 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGATGAGTCGGGACTCGGAGCGGCTGGTTCCTCCTGCGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCA-GCGTCCTTGTTTTTTTCTCATT----CTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT s panTro4.chr19 59271641 189 + 63644993 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGATGAGTCGGGACTTGGAGCCGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCA-GCGTCCTTGTTTTTTTCTCATT----CTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128517 189 + 60714840 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGACGAGTCGGGACTCGGAGCAGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGGGTTTCCA-GCGTCCTTGTTCTTTTCTCATT----CTGTATTTGTGTCCCCAGGGCCCC----TGTCTTCCCCTCGTCTTTTCTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891059 189 - 106955855 GTAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGAAGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCACGCCCCTTCCTTCTGTAGCCTTCCTCACTAGCATTTCCA-GCGTCCTTGTTTTTTTCTCATT----CTGTGTTTGTGTCCCCAGGGCCCC----CGTCTTCCCCTCATCTTTTCTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60150075 159 + 64156825 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACACCTGGAGGGAAAGTCGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCGCACCCCTTCCTTCTGGAGACTTCCTCACTAGGGTTTCCA-GTGTCCTTGTTTTTTTCTCATC----CTGTATTTGTGTCCCCAGG---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55238474 189 + 59248254 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACACCTGGAGGGAAAGTCGAGTCGGGACTTGGAGGGGCTGGTTCCTCCCGCACCCCTTCCTTCTGGAGCCTTCCTCACTAGGGTTTCCA-GTGTCCTTGTTTTTTTCTCATC----CTGTATTTGTGTCCCCAGGACCCC----CGTCTTCCCCTCATCttttcttctt i macFas5.chr19 C 0 I 383 s papAnu2.chr19 47345151 189 + 51301725 GCAGGGTCAGGAGGGAAGGCTTCCTAGACACGCCTGGAGGGACAGTCGAGTCGGGACTCGGAGGGGCTGGTTCCTCCCGCGCCCCTTCCTTCTGCAGCCTTCCTCACTAGGGTTTCCA-GCgtccttgtttttttctcatc----ctgTATTTGTGTCCCCAGCGCCCC----CGTCTTCCCCTCGTCTTTTCTTCTT i papAnu2.chr19 M 409 C 0 s chlSab2.chr6 47035912 189 + 50890351 GCAGGGTCAGGAGGGAGGGCTTCCTAGACACGCCTGGAGGGAAAGTTGAGTCGGGACTTGGAGGGGCTGGTTCCTCCTGCGCCCCTTCCTTCTGGAGCCTTCCTCACTAGGGTTTCCA-GTGTCCTTGTTTTTTTCTCATC----CTGTATTTGTGTCCCCAGGGCCCC----CATCTTCCCCTCATCTTTTCTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563698 186 + 49145316 GCAGGGTCAAGAGGGAGGGTTTCCTAGACACACCTGGAGGGAAAGAGGAGCCAGGACTCAGA-TGGCCGATTGCCCCTATGCCCCTTCCTTCCGTAGTCTTCCTCACTAGGGTCTCCA-GTGTCCTCGTT-TTTCCTCACT----CTATATCTGTGTCCCCAGGGGCCC-----GTTTTTCCCTTATCTTTTCTTCTC i calJac3.chr22 C 0 I 1 s mm10.chr7 3841742 180 + 145441459 GGTGAGTCAGCAGAGAGGGCTTCTTGGACAGCCCTAGAGGGAAGGTGACAGCTAGAGACTGA-GGTTTTATTCTTACCAAACACCTTT--------GCCCTCCTCTCCTGCCTTTGTGCATGTCCCCTCTTCTCCCCAGTCAGGGCAGTGTTCAAGAACAAAGGCTCTC----CATTTTGTCCTTCTCTACCT----- i mm10.chr7 C 0 C 0 s canFam3.chr1 19744879 178 - 122678785 GCTGGGTCAGGAGAGAGGGCTTCCTTGACACACCTG--GGAGAAGACCAGCTGTGGATTGTAGGGGCTGATTCTCCCCAAACCTCCCTTCTC-----CCATCCTGACCCCAGGTCTCA-TGTCCCTCACCCTCTGATTCTC----TGATCTGTGAGCTCCATGGTCCCCTCACCATCCCCCCTTCATCTG-------- i canFam3.chr1 C 0 C 0 a score=1000.000000 s hg38.chr19_GL949753v2_alt 319353 1 + 796479 G s panTro4.chr19 59271830 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128706 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891248 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s mm10.chr7 3841922 1 + 145441459 G i mm10.chr7 C 0 C 0 e canFam3.chr1 19745057 0 - 122678785 C e calJac3.chr22 45563884 1 + 49145316 I e chlSab2.chr6 47036101 0 + 50890351 C e papAnu2.chr19 47345340 0 + 51301725 C e macFas5.chr19 55238663 383 + 59248254 I e rheMac3.chr19 60150234 0 + 64156825 C a score=1461407.000000 s hg38.chr19_GL949753v2_alt 319354 417 + 796479 CGTGGG---CTAGCCCGAGGGTAAGGCTCCCAACAGCTCACCTGGTGCC-CTGAC-TTTGTAT--AAGGAAAAGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTATGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTTCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCAATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTTACCACAGGGCTTGGCAGGGCGGACAGGGTGGGTCTGCTG------TAGGCTTTCAAGAGAAAAAAAGGCAGCCGTGT-TTAAATG s panTro4.chr19 59271831 417 + 63644993 CGTGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTCACCTGGTGCC-CTGAC-TTTGTAT--AAGGAAAAGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTTCAGGGTCCAGGAGAGCCTGTGGTAT-----CCTTCCTCAATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTTGGCAGGGCGGACAGGGTGGGTCTGCTG------TAGGCTTTCAAGAGAAAAAAAGGCAGCCGTGT-TTAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56128707 417 + 60714840 CATGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTTACCCGGTGCC-CTGAC-TTTGTAT--AAGGAAAGGCTACGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCGTGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCAATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACATTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCAGACAGGGTGGGTCTGCTG------TAGGCTTTCCGGAGATAAAAAGGCAGCCGTGT-TTAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891249 418 - 106955855 CGTGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTCACCCGGTGCC-CTGACTTTTGTAT--AAGGAAAGGCTATGGCTTCCTCACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAATGTACCCCTGTTGCTGAAGGTCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGCTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCAATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCAGACAGGGTGGGTCTGCTG------TAGGCTTTCAGGAGAAGAAAAGGCAGCCGTGT-TTAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60150234 404 + 64156825 -----------------AGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGTAAAAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCGATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCGGAGGTTACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTG------TAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGT-TTACGTG i rheMac3.chr19 C 0 I 4571 s macFas5.chr19 55239046 418 + 59248254 CGTGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGTAAAAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCGATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCGGAGGTCACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTG------TAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGT-TTACGTG i macFas5.chr19 I 383 C 0 s papAnu2.chr19 47345340 416 + 51301725 CGTGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGCC-CTGAC-TTTGTGT--AAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTGTTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTCCCATGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCGATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTCGGCAGGGCGGACAGGCTGGGTCTGCTG------TAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGT-TTACGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47036101 416 + 50890351 CGTGGG---CTAGCCTGAGGGTAAGGCTCCCAACAGCTCAGCCGCTGTC-CTGAC-TTTGTGT--AAGGAAAAGCTACGGCTT-CTTACCTGACACCAGTAGCTGCAGGGGGTCACTGGGTTCCGACCACA-CGTACGGGGTATTGTTTTCATAGCCGTAGCATCTGAACGTACCCCTGTTGCTGAAGGTCAGGGGACCCACGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGTCT-----CCTTCCTCGATCAGAGTGAACCTGCC-CAGTCCCAGCCGTGAGGCACACCGGAGGGTCACGTTCACTCCTGAGGTCACCACAGGGCTTGGCAGGGCGGACAGGCTGGGTCTGCTG------TAGGCTTTCAGGAGAGCAAAGGGCAGCTGTGT-TTACGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45563885 416 + 49145316 AGTGGGT--CTAGCCTGAGGGCAAGGCTGCCAACAGCTCCCCTG-TACC-CTGAC-GTTGTAT--AAGGAAAGGCTGTGGCGTGCTCACCTGACACCAGGAGCTGCAGGGGGTCACTGGGTTCTGACCACA-CGTAGGGGGTATTGTTTCGATAGCCGTAGCATCTGAATGTACCCCTGTGGCTGAAGATCAGGGGGCCCATGGGGAACAGGGCCTGGAACTTTCCATGGTTGTGTTGGTGTGAGTCCAGGGTCCAGGAGAGCCTGTGGATT-----CCTTCCTCAATCAGAGTGAACCTGTC-CAGTCCCAGCCGAGAGGCACATCGGAGGGTCACGTTCACTCCTGAGGTCACCACGGGGCTTGGCAGGGCTGAAAGGGTGGGTCTGCTG------TAGCCTTTAGGAGAAAAAAACAGCAGCCTTG--TTAAATG i calJac3.chr22 I 1 C 0 s mm10.chr7 3841923 417 + 145441459 ------CAACTCAGCAGAGGGGCAGGCCTATGGCAAAGGGCTTGGGGTCTCAGAA-AATGTTT--GGAGAATGATAGTGGGGA-CTTACCTGAGATGAGTATTTGTTGAAGAGCACTAGGTACTGACCACA-GCTGTGGGGCATTCTTGTAGTAACCATAACATCTGAATGTCCCTGTGTGGGTTGGGGTTGTGGGTCCTATAATAAACAGGGCTCGGTACTGTCTACTA----GAAGATATATGCTCTGTGTCCAGT-GAGCTGGTGAATTTCTTATCTTCCTTGGTGAGAATGAATTTATCGTAGTGAAAGTC-TGAGGCACAGTGGAGTGTCATGTTCCCTCCTGCTGTCACCACAGGGCTGGGCAGTACTGACAGCCTGGGTTCATAGTATTCATAGATTCCTAGGAGAG---AAGGAAGCCGTCTCTTACAT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19745057 410 - 122678785 ---GGG---CTCCCTTGGGAGCAAAGACCCCAGTAACCTGTCTGGTGCCTCAAAC-CATGGAT--GGGACAAAAATCTGACTTCCTTATTTGAGACCAGCAGCTTAAAGGGGTCACTGGGGAAGGACCCCACCCTGGGGGATGTTGTT---ATAACCATACCATCTGAACATCCACGTGAAGCTGGGGGCCACAGGGCCCACAGGGAACAGGGTCTGGATCCCCCTACTAGGTGCTCGCTAGGAGTCCTGGGTCCAGGGGTGCTGGCATTGT-----CCTTCCTTCATCAGGACAGACCTGCG-GAATCCTGTCCATGAATCACACTGGAGGGTCACATGCCCTCCTGAGGGCACAACAGGGCTGGGCAGGACTGAGAGGTTGGGTTTGCCA------TGCAATCCTAGGTGAGAGGAGGG--GCTGTG--TTAAATG i canFam3.chr1 C 0 C 0 a score=1481587.000000 s hg38.chr19_GL949753v2_alt 319771 385 + 796479 GGGCTCACA-CC-TCCC------ACC-TTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTCGAGAGCTGAGAGCCGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCATGTTCCCACATCATGGATGGGATGGAGAGTTTGACCTTGTTTTCAGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGTACCCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGGTTATGCCAGGTGATCACGGGACCTGGCTCGGCC s panTro4.chr19 59272248 385 + 63644993 GGGCTCACA-CC-TCCC------ACC-TTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTCGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGAGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCATGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCAGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGTACCCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGGTTATGCCAGGTGATCACGGGACCTGGCTCGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56129124 385 + 60714840 GGGCTCACA-CC-TCCC------ACC-TTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTGGAGAGCTGAGAGCTGAGCCCCTTCCCAAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCGGACTCCAGTGTTTTTAATATGTGCCTCGACATTGAGTTTCCCTCTTTATCTAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACAGGCTTACTCCAGGTGATCACGGGACCTGGCTCGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102891667 385 - 106955855 GGGCTCACA-CC-TCCC------ACC-TTATCCCACAAGGCTGGGCTGTGAGAAGG-GAGACCCCTTGAGAGCTGAGAGCCGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTGGCTGGGCTCTGACCAGCCTGCAGGGCTGCGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTCGATCTTGTTTTCTGACTCCAGTGTTTTTAATTTGTGCGTCGACATTGAGTTTCCGTCTTTATCCAGACGGTACTCCCGAGCCTCCAGGGGACCCTGACACCAGATGGTCACGGGCTTCTTCCAGGTGATCACGGGACCTGGCTCGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60155209 385 + 64156825 GGGCTCACA-CC-TCCC------ACT-TTATCCCGCAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGGCCTTGTTTTCAGACTCCAGTGTTTTTAACATGTGCCTCAACATTGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCC i rheMac3.chr19 I 4571 C 0 s macFas5.chr19 55239464 385 + 59248254 GGGCTCACA-CC-TCCC------ACT-TTATCCCGCAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGAGAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGGCCTTGTTTTCAGACTCCAGTGTTTTTAACATGTGCCTCAACATTGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47345756 385 + 51301725 GGGCTCACA-CC-TCCC------ACT-TTATCCCACAAGGCTGGGCTGTGAGAGGG-CAGACCCCTTGAAAGCTGAGAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGGTATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCCTGTTTTCGGACTCCAGTGTTTTTAACATGTGCCTCGACATTGAGTTTCCCTCTTTATCCAGACGGtactcctgggcctccagggcGCCCTGACACCAGATGGTCACGGGCTTTTTCCAGATGATCACGGGACCTGGCTCGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47036517 385 + 50890351 GGGCTCACA-CC-TCCC------ACT-TTATACCACAAGGCTGGGCTGTGAGAGGG-GAGACCCCTTGGGAGCTGAGAGCTGACCCCCTTGCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCTGACCAGCCTGCAGGGCTCTGATAGTAACAGTGATATCGCCCTGCGTGTTCCCACATCATGGATGGGATGGAGAATTTGACCTTGTTTTCAGGCTCCAGTGTTTTTAACATGTGCCTCGACATAGAGTTTCCCTCTTTATCCAGACGGTACTCCTGGGCCTCCAGGGTGCCCTGACACCAGATGGTCATGGGCTTTTTCCAGACGATCACGGGACCTGGCTCGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564301 371 + 49145316 GGGCTCACA-CC-TCCCCATTTAACC-CTCTCCCTCAGGGCTGGGCTGTGAGAGG---------------------GAGCTGACCCCCTTCCCGAGGGCAGAGCCTGGGGCTGGGACCCCTGAGTGTCCTCTC-ACCTGTCACCACCAGCTCCAGGGGGTCGCTGGGCTCCGACCAGCCTGCAGGGCTCTGGTAGTAACAGTGATATCGCCCTGCGTGTTTCCACTGCATGGCTGGGATGGAGAATTTGACCTTGTTTTCAGAATCCAGTGTTTTTAATATAGTCCTTGACATTGAACCTCCATCTTTAGCCAGACGGTACTCCTGGGCCTCCTGGGTGCCCTGACACCAGAGGGTCACAGGCTTATTCCAGGTGCTCACGGGACCTGGCTCAGCC i calJac3.chr22 C 0 C 0 s mm10.chr7 3842340 357 + 145441459 GCTCTCACA-CCGTCCC------AGTGTTCTCTTGCAATACT---TTGTGGGAAGG-GAAGAC--------------------------TCCTAGGAGCAGAGCCTGGGGTTGAGA-ATCTGACTGTCCCCTC-ACCTGTCACCACCAGCTCCAGGGTGTCACTGGGCTGTGACCAACCAGCTGAGCTGTAACAATAACAGCGATATTGCCCTGCATGTTGTTGTGTCACAGAAGGGATGAAGAACCTGCCCTTGTTCCCAGGCTCCTGTAGGGTCTGTGTGCTCTGTGTTTTTTGGCTTTTCTCATTATGCAGAAAATATACTTCTGCATCCAGGTTCCCCTGACACCAGATGGTCATTGCTCTTTTGGAGGTGATCACAGATCCTGGTTCAGCC i mm10.chr7 C 0 I 1896 s canFam3.chr1 19745467 376 - 122678785 GGGCTCAGATCC-CCCC------ACA-TGATCCC-CAGGACTCGGCTGTGAGAGGGTGACACC---------CTGAGAGCAGACCCCCTTCCTGAGGGCAGCACCTGGGGCTGGG--CCCTGAATGGGCTCGCAACATGTCACCAGCAGCTCCAGGGAGTCACTGGGCTCTGGCCACTCAGTGGTGCTTCCATAGTAACAGTAATATTGTCCTGCATATACACCTGTCATGTGTGTGATGGAGAACTTAGCCTTGTCCTTGGGCTCTAGTGACTCCTGTCTGTCCCAAGTCACCGATTGTCTCTCTCTATGCAGGCGATATACCTTGGCCTCCAGGCTTCCCTGACACCAGAGGGTCACTGGTGTCCTCCAGGGGATCACAGAACCAGGCTCAGCC i canFam3.chr1 C 0 C 0 a score=430738.000000 s hg38.chr19_GL949753v2_alt 320156 128 + 796479 CACAGGATGGGTTTGGGTAGGTTTTCTGGAAGGAAATTACAGGTTAGGTCCCAAGATGTcctcaaccctcagatcccagctctcagccccagga-cc--c--ccctcatcccca-tcagtcagcccAGAACTGC s panTro4.chr19 59272633 128 + 63644993 CACAGGATGGGTTTGAGTAGGTTTTCTGGAAGGAAATCACAGGTTAGGTCCTAAGATGTCCTCAACCCTCAGATCCCAAATCTCAGCCCCAGGA-CC--C--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56129509 128 + 60714840 CACAGGAAGGGTTTGAGTAGGTTCTCTGGAAGGAAAACACAGGTTAGGTCCCAAGATGTCCTCAACCCTCAGATCCCAGCTCTCAGCCCCAGGA-CC--C--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892052 128 - 106955855 CACAGGCTGGGTTTGAGTGGGGTCTCTGGAAGGAAATCACAGGTTAGGTCCCAAGATGTCCTCAACCCTCAGATCCCAGTTCTCAGCCCCAGGA-CC--C--CCCTCATCCCCA-TCAGTCAGCCCAGAACTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60155594 128 + 64156825 CACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAACCACAGGTTAGGTCTGAAGATGTCCCCAACCCTCAGATTCCGGCTCTCAGCCCCAGGA-CC--C--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55239849 129 + 59248254 CACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAATCACAGGTTAGGTTCGAAGATGTCCCCAGCCCTCAGATTCCAGCTCTCAGCCCCAGGACCC--C--CCATCATCCCCA-TCAGTCAGCCCAGAACTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47346141 128 + 51301725 CACAGGATGGGTTTGAGTAGGTTCTCTGGAAGGAAACCACAGGTTAGGTCTGAAGATGTCCCCAACCCTCAGATTCCGGCTCTCAGCCCCAGGA-CC--C--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47036902 129 + 50890351 CACAGGGTGGGTTTGAGTAGGTTCTCTGAAAGGAAATCACAGCTTAGGTCCGAAGATGTCCCCAACCCTCAGATTCCAGCTCTCAGCCCCAGGACCC--C--CCGTCATCCCCA-TCAGTCAGCCCAGAACTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45564672 130 + 49145316 CACAAGATGGGTTGGAGTAGGTTCTCTGGGAGGAAACCACAGGTTAGGCCCCAAGATGTCCCCACCCCTCAGATCCCAGCTCACAGCCCCAGGA-CC--CTTCAGACACCCCCA-GCAGTCAGTCCTGAGCTGC i calJac3.chr22 C 0 I 394 s mm10.chr7 3844593 126 + 145441459 CTGAGGATAGGCTTAGGGAGGGACCCTGCAAGTAACAGAGCAACTAGGACACAGGACAAACACA---CTCAGATTGCAGTCCTTAACCCCATGG-CCTTC--CTGCCACCCACA-GGACTCA-CACACAGGTGG i mm10.chr7 I 1896 C 0 s canFam3.chr1 19745843 126 - 122678785 CAGATGGTGGGTTTGGGGAGGGTCCCTGGAAGGAAA-CAGAGGCTGGGTCACAAGACCCTCTGCACCCCCGGTTCCCAG--CTCAGCCCCAACC-CC--C--CAGGTATCCCCACTCTGTCTGCCCAGAGCTGC i canFam3.chr1 C 0 C 0 a score=1758457.000000 s hg38.chr19_GL949753v2_alt 320284 481 + 796479 TGTCTTCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCCGAAGCCTGAGCAGGTCTTCTTCT--TTTCCTTGAGCC-------CCTGGGATGCCCTAATTGACTAAGGCATGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGAAGAGCAGGCTTGTGAGAATGAGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGGCCACGGTGCCCGTAGACACAGACAG-ACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTTGTCCCATCAGCAC-----ACCGACAGAAAGAGGAACTGCCCCTCCCCAGG------ACCCTGGCT s panTro4.chr19 59272761 478 + 63644993 TGTCTTCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCTCCGAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGATGCCCTAATTGACTAGGGCATGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGAAGAGCAGGGTTGTGAGAATGAGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGTAGGCAGGTGTGGCCACGGTGCCCGTAGACACAGACAG-ACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATCAGCAC-----ACCGACAGAAAGAGGAACTGCCCCTCCCCAGG------ACCCTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56129637 480 + 60714840 CGTCGTCACCCCCAGCCACCCAG-GGGTGG-CCCTTGTCCCCAGAGAGGAGGAGGGACCTAAGACAGCTGGGGACAGACTCACCTGCCTGCACCCGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCCGTGAAAGATTTGCCCCCAAAGCCTGAGCAGGTCTTCTTCC--TTTCCTTGAGCC-------CCTGGGGTGCCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCGTCTTAAGATCTCACCAAAGAAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGACCACAGTGCCCGTAGACACAGACAG-ACACATGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATCAGCAG-----CCCCACAGAAAGAGGAACTACCCCTCCCCAGG------ACCCTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892180 478 - 106955855 TGTCGTCACCCCCAGCCGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAAGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCACCTGGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTGT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCATGGCTATGGATTGGGGTCTCTCTCCTAAACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCGAAGAAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCCCCTGGCCCTGGCCGTGCAGGCAGATGTGACCACGGTGCCCGTAGACACAGACAG-ACACACGGTGTGCGGGCACACGGAGGCTGGGTCCTCCCCATCACAAGGTCGCCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGGCCCTCCCCAGG------AGCCCGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60155722 476 + 64156825 TGTCTCCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGTTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGAGCACGGTGCCCGTAG--ACAGACAG-ACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55239978 476 + 59248254 TGTCTCCACCCCCAGCTGCCCAG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGGTGTGAGCACGGTGCCCGTAG--ACAGACAG-ACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTGGCT i macFas5.chr19 C 0 M 14663 s papAnu2.chr19 47346269 476 + 51301725 TGTCTCCACCCCCAGCTGCCCGG-GGGTGGTCCCTTGTCCCCAGAGAGGAGGAGGTACCTAGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCTGGGGCCCAGGCTCAGCCCTGGAAGAGAGTTCCCTGTGAGAGATTTGCCCCCAAAGCCTAAGCAGG---TCTTCT--TTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAACGGGGGTCATGGCAT---CTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGAGCACGGTGCCCgtag--acagacag-acacatgGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCCTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037031 477 + 50890351 TGTCTCCACCCCCAGCTGCCCAG-GAGTGGTCCCTTGTCCCCAGAGAGGAGGAGGGACCTGGGACAGCTGGGGACAGACTCACCTGCCTGCAGGCAGGTCCT--GGCCCAGGCTCAGCTCTGGAAAAGAGTTCCCTGTGACAGATTTGCCCCCAAAGCCTGAGCAGG---TCTTCT--TTTTCTTGAGCC-------CCTGGGATGTCCTAATTGACCAGGGCCTGGCTATGGATTGGGGTCTCTCTCCTAGACTAGGGTCTCTCCTCCCCGTCTTAAGATCTCACCAAAGCAGAGCAGGGTTGTGAGAATGGGGGTCATGGCATTTCCTCCTCCTCCTGGCCCTGGCTGTGCAGGCAGATGTGAGCACGGTGCCCGTAG--ACAGACAG-ACACATGGTGTGTAGGCACACGGAGGCTGGGTCCTCCCCATCACGAGGTCATCCCATCAGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AACCTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565196 473 + 49145316 TTTCTCCATCCCCAGCTGCCCAG-GGGTGACCCCTTGTCCCCAGATAGGAG---GGACCTGGGACAGCTGGGGACAGACTGACCTGCCTGCACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTCCCAGTGAGAGATTTGTCCCCAAAGCCGGAGCAGG---TCTTCTTCTTTCCTTGAGCC-------CCTGGGGTGTCCTAATTGACCAGGATCTGGCTATGGATTGGGG--TCTCTCCTAGACTAGGGTCTCTCCTCCCCCTCTTAAGATCTCACCAAAGCAGAGCAGGATTGTGAGAATGGGAGTCATGGCAT---CTCCTCCTCCTGGCCCCAGCTGTGCAGGTGGATGTGACTGTGGTGCCCACAGG-ACAGACAG-ACACATGGTGTG-GGGCACTCGGAGGCTGGGTCCTCCCCATCACGAGGTCGTCCCATTGGCAG-----CCCCACAGAAAGAGGAACTGCCCCTCCCCAGG------AGCTTGGCT i calJac3.chr22 I 394 C 0 s mm10.chr7 3844719 469 + 145441459 TGTTTTCCACCATTACAGCCCAG-GCATGGCTCCTGGATAT--GAAGAAAAGAGCATTTCAGGTCAGCTGCAGACACACTCACCTGTCAGCACTGGGATCCAGAGGCTCAGAGTCAGTCCTGGAAGAGAGTTCTTTGTAAGAGATTTGTCCCCAAGG-CTGAGCAAG---TCTGCAGAAACATCTGAGAC-------CCTGAGGTTTCCTTTTGGGTGAGTGCTGGTCTACAGGCCATGA--TCATTTCCAGACCTCAGTATTCCCTCCCCCTCTTCACATCTCACCAAGACAGAGCAGGGCTGTGAAGGTGCAGGACATGGCAT---CTCCCCTCAGTGGCTCCAACTGTGCTTGAGGGCAGAGCTACAGAGCCTTTCTGAAGGGATTGTGTACAGGGTGTG---GCTC-TGGAGGCAGGGCAGTCCCCATGACATGGTCAT-ATATCAGCAG-----CCCCACAGAAAGAGGAACTG-CCCTCCTCAGG------ACCATGCT- i mm10.chr7 C 0 C 0 s canFam3.chr1 19745969 486 - 122678785 --TGATCACCAGCCCCTGCCTGGTGGGTGGTCCCT-GTTCTCAGTGAGGAGGTGGGACTGGGACCCCCTGGGGACAGACTCACCTGCCTGCACTCGCGTCCTGGAGCTCATACTCAGCCCTGGAAGAGAG-TCCCTGTGAGAGGTTTGCCT-CAAATCCTGAGCTGAAC-CCCTCC--TCTCCATGAGCCTCCTGAGCCTGAGAT-CTTTGGCAGACCAGGACCTGGCTGTGGGATGGG---TCCCTCCCAGACTAGGGTGTCCCCTCCCC-TCCTCAGATCTCACTTAAACAGAGCAGGGCCATGAGGGTGGGGGTCATGGTGT---CTCCTGTCTTTGGCCCTGGCCCTGCAGAT-GATAGGACCATGAGGCCCAGAGG-ATAGGCAG-ACGCACAAGGTGTGGGTACTTGGAGGCC-AGTCTTACCCATAATGGGGTTGTCACATTAGCAGGATGTGACTACAGGAAGGGGAACACCCGGTCCCCAGGTCCCCTAGCCTGGCT i canFam3.chr1 C 0 C 0 a score=7416.000000 s hg38.chr19_GL949753v2_alt 320765 2 + 796479 CT s panTro4.chr19 59273239 2 + 63644993 CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130117 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892658 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156198 2 + 64156825 CT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346745 2 + 51301725 CT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037508 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565669 2 + 49145316 CT i calJac3.chr22 C 0 C 0 s mm10.chr7 3845188 2 + 145441459 CT i mm10.chr7 C 0 C 0 s canFam3.chr1 19746455 2 - 122678785 CT i canFam3.chr1 C 0 I 10348 e macFas5.chr19 55240454 14663 + 59248254 M a score=27145.000000 s hg38.chr19_GL949753v2_alt 320767 10 + 796479 CATTTCCCAG s panTro4.chr19 59273241 10 + 63644993 CATTTCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130119 10 + 60714840 CATTTCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892660 10 - 106955855 CACTTCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156200 10 + 64156825 CATTTCCCAG i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346747 10 + 51301725 CATTTCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47037510 10 + 50890351 CATTTCCCAG i chlSab2.chr6 C 0 I 18727 s calJac3.chr22 45565671 10 + 49145316 CATTTCCCAG i calJac3.chr22 C 0 C 0 s mm10.chr7 3845190 10 + 145441459 GACTTCCTCA i mm10.chr7 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e macFas5.chr19 55240454 14663 + 59248254 M a score=111374.000000 s hg38.chr19_GL949753v2_alt 320777 61 + 796479 --GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCCGATATTTCAGACACAAATGGGGATTC s panTro4.chr19 59273251 61 + 63644993 --GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCCGATATTTCAGACACAAATGGGGATTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130129 61 + 60714840 --GGCTTGTCCTGGGGGTGAGCACCAGGCTCTCTGCTGATATTTCAGACACAAATGGGGATTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892670 61 - 106955855 --GGCTTGTCCTGGGAGTGAGCACCAGGCTGTCTGCCAATATTTCAGACACAAATGGGGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156210 61 + 64156825 --GGCTTGCTCTGAGGGTGAGCACCAGACTCTCTGGAGATATTTCAGACACAAATGGGGACTC i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346757 61 + 51301725 --GGCTTGCTCTGGGGGTGAGCACCAGACTCTCTGGAGATATTTCAGACACAAATGGGGACTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565681 61 + 49145316 --GGCTTGTTCTGAGGGTGAGCACCAGGCTCTCTGCAGGTATTTCAGACAGAAATGGAGATTC i calJac3.chr22 C 0 C 0 s mm10.chr7 3845200 61 + 145441459 ATGGTGTGACT--AGGCCAGGCAGTCGACCCTCTGCCATTAGGTCTTACACAGATGGCGTTTC i mm10.chr7 C 0 N 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I e macFas5.chr19 55240454 14663 + 59248254 M a score=20830.000000 s hg38.chr19_GL949753v2_alt 320838 14 + 796479 ACAAGGGGGTCGTT s panTro4.chr19 59273312 14 + 63644993 ACAAGGGAGTCGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130190 14 + 60714840 ACAAGGGGGTCGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892731 14 - 106955855 ACGAGGGGGTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156271 14 + 64156825 ACAAGGGGGTCATT i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47346818 14 + 51301725 ACAAGGGAGTCTTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565742 14 + 49145316 ACAAGACGGTCACT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I e macFas5.chr19 55240454 14663 + 59248254 M a score=168652.000000 s hg38.chr19_GL949753v2_alt 320852 83 + 796479 AAGAAGGACATTTTCggccgggcgctgtggctcacagctgtcatcccagcactttgggaggccaaggtgggtggatcacttga s panTro4.chr19 59273326 83 + 63644993 AAGAAGGACGTTTTCggccgggcgctgtggctcacagctgtcatcccagcactttgggaggccaaggtgggtggatcacttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130204 83 + 60714840 AAGAAGGACATTTTCggccgggcactgtggctcacacctgtcatcccagcactttgggaggccaaggtgggtggatcacttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102892745 83 - 106955855 AAGAAGGACGTTTTCggccgggtgccatggctcacacctgtaataccagcactttgggaggccaaggtggatggatcacttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156285 81 + 64156825 AAGAAGGACGTTTTTggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggagggcggatca--tga i rheMac3.chr19 C 0 I 309 s macFas5.chr19 55255703 83 + 59248254 AAGAAGGACGTTTTTggctgggtgttgtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggaccacttga i macFas5.chr19 M 14663 C 0 s papAnu2.chr19 47346832 83 + 51301725 AAGAAGGACGTTTTTGACTGGATGTCCTGGCTTacaaatgtaatcccagcactttgggaggccaaggtgggtggaccacttga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565756 81 + 49145316 AAGAAGGACGTTTTTggccaggcacggtggctcacgcctgtaatcctagcactttgggaggccagggcaggcagatcacaa-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=157717.000000 s hg38.chr19_GL949753v2_alt 320935 66 + 796479 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtgtctactaaaaatacaaaaat s panTro4.chr19 59273409 66 + 63644993 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtgtctactaaaaatacaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130287 66 + 60714840 ggtcaggagttcgagaccagcctggccaacatgacaaaaccccgtctctactaaaaatacaaaaat i ponAbe2.chr19 C 0 M 117 s nomLeu3.chr10 102892828 66 - 106955855 ggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtctctactaaaaatacaaaaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156675 66 + 64156825 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i rheMac3.chr19 I 309 C 0 s macFas5.chr19 55255786 66 + 59248254 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47346915 66 + 51301725 ggtcaggagttcgagaccagcctggccaacatggcacaaccccgtctctactaaaaatacaaaaat i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565837 66 + 49145316 gatcgggaattcgagatcagcctgaccaacatgatgaaaccctgtctctactacaactacgaaaat i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=37921.000000 s hg38.chr19_GL949753v2_alt 321001 26 + 796479 gagccggtcgtggtggcacatgcctg s panTro4.chr19 59273475 26 + 63644993 gagccggtcatggtggcacatgcctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102892894 26 - 106955855 gagccgggcgtggtggcgcatgcctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156741 26 + 64156825 gagccaggcgtggtggcacaagcctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255852 26 + 59248254 gagccaggcgtggtggcacaagcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47346981 26 + 51301725 gagccaggcgtggtggcacaagcctg i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565903 26 + 49145316 tagctgggcatagtggtgggtacctg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56130353 117 + 60714840 M e chlSab2.chr6 47037520 18727 + 50890351 I a score=211585.000000 s hg38.chr19_GL949753v2_alt 321027 93 + 796479 taatcccagctactcgggaggctaaggcgggagaatcacttgaactccggaggcagaggctgcagtgagccgagatcacgccattgcactcca s panTro4.chr19 59273501 93 + 63644993 taatcctagctactcaggaggctaaggcgggataatcacttgaactccggaggcagaggttgcagtgagccaagatcacaccattgccttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130470 93 + 60714840 taatcctagctactcgggaggctgaggcaggagaatcacttgaacttgggaggcagaggttgcagtgagccaagatcatgccattgctctcca i ponAbe2.chr19 M 117 C 0 s nomLeu3.chr10 102892920 93 - 106955855 taatcctagctactcgggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccaagatcacgccattgccctcca i nomLeu3.chr10 C 0 I 126 s rheMac3.chr19 60156767 93 + 64156825 taatcctagctattcaggaggctgaggcaggagaaccactagaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255878 93 + 59248254 taatcctagctattcgggaggctgaggcaggagaaccactagaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347007 93 + 51301725 taatcctagctattcgggaggctgagccaggagaaccacttgaactcgggaggcagaggtggcagtgagccaagatcacgccattgcactcca i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45565929 93 + 49145316 caatcccagctacttgggaggctgaggcaggagaatcgcttgaaaccggaaggcagaggttgcagtgaaccaagatcaccccattgcactcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=29973.000000 s hg38.chr19_GL949753v2_alt 321120 16 + 796479 gcctgggcaacaagaa s panTro4.chr19 59273594 16 + 63644993 gcctgggcaacaagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56130563 16 + 60714840 gcctgggcaacaagaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60156860 16 + 64156825 gcctgggcaacaagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255971 16 + 59248254 gcctgggcaacaagaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347100 16 + 51301725 gcctgggcaacaagaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45566022 16 + 49145316 gcctaagcaacaagag i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e nomLeu3.chr10 102893013 126 - 106955855 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=32061.000000 s hg38.chr19_GL949753v2_alt 321136 14 + 796479 caaaactctatctc s panTro4.chr19 59273610 14 + 63644993 caaaactctatctc i panTro4.chr19 C 0 I 3 s ponAbe2.chr19 56130579 14 + 60714840 caaaactccatctc i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 102893139 14 - 106955855 CAAAACTCCATCTC i nomLeu3.chr10 I 126 C 0 s rheMac3.chr19 60156876 14 + 64156825 caaaactccatctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55255987 14 + 59248254 caaaactccatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347116 14 + 51301725 caaaactccatctc i papAnu2.chr19 C 0 I 2 s calJac3.chr22 45566038 14 + 49145316 cgaaatttcatccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47037520 18727 + 50890351 I a score=3258887.000000 s hg38.chr19_GL949753v2_alt 321150 1164 + 796479 ----aaaaaaaaaaaaaaaaaGGACGTTTCCATCTCTGTGTGGCACAGAAAAGGAAGTCCAGGGTCCTCACAGACAGGGAGGAACCTAGGGCTCCAGGTGAAAGTGAGACGCTGTGGCTGCCCCTC-TTCTGTGTTTGCACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAG-CCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCTTGGCTCTCATTTCCCCAGGGCTTGTCCTGGGCGTGAACACCAGGCTCTCTAGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCATCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGATGGTTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCCCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGTAACCACCCGCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTGTAAGATCATGTGCATGGGGGTAGAT--GGACAGCATGCAGTGTATTTGAGAAGAGATAGACAACTAGAAATTATGTAGGCAGATGTGGCTGTGGTG-AAAATAGTAGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcgcacctgtaatcccagcactttgggaggcccaggcgggcagatcacttgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctatactaaaaataac-aaaaattagGCTCATTTTTGAATCCCCTTAAACATTACC-AGCCCCtaaatgtctgctctatggattcttctttgaattcagtattaacatctttcccgttccctcgttaatagtaagctaaataaaaacttgtgtccattttatccttctagaagagcaa------tttttttttacctttttg-----aaaaaAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG s panTro4.chr19 59273627 1166 + 63644993 ----aaaaaaaaaaaaaaaaaGGACGTTTCCATCTCTATGTGGCACGGAAAAGGAAGTCCAGGGTCCTCACAGACAGGGAGGAACCTAGGGCTCCAGGTGAAAGTGAGACGCTGTGGCTGCCCCTC-TTCTGTGTCTGCACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCTTGGCTCTCATTTCCCCAGGGCTTGTCCTGGGCGTGAACACCAGGCTCTCTAGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGACGGTTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCTCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGTAACCACCTGCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTTTAAGATCATGTGCATGGGGGTAGAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGACAACTAGAAATTATGTAGGCAGATGTGGCTGTGGTG-AAAATAGTAGGTAGAATTAATACACTTAAAAATCAATTCTATggacgggcacggtggctcaaacctgtaatcccagcactttgggaggcccaggcgggcagatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctatactaaaaataac-aaaaattagccTcatttttgaatccccttaaacattacc-agcccctaaatgtctgctctacggattcttctttgaattcagtattaacatctttcccgtccccttgttaatagtaagctaaataaaaacttgtgtccattttatccgtctagaagagcaa------tttttttttacctttttg----aaaaaAAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i panTro4.chr19 I 3 C 0 s ponAbe2.chr19 56130597 1169 + 60714840 ----aaaaaaaaaaaaaagaaGGACATTTCCACCTCTATGTGGCACAGAAAAGGAGGTCCGGGTTCCTCACAGACAGTGAGGAATC-AGGACTCCAGGTGAAGGTGGGATGCTGTGGCTCCCCCCCGTTCTGTGTTTACACATGGGCACTGCCATCTCTCTGCTTCCTTGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCTCCAGGAGCCCGGCTCTCATTTTCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTTTCTGGAGATATTACAGACAGAAATGGGCTCTCCCCTCACTTTGGCTGCATCTATCTAATCTGTCCTCATCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCACCCCCTTCCAGGTGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAGGAGGCTCCATCTCCCC--------------------------TGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCTGGACATCTGTCCCACACATGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACTTTGAGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGATAGGAGCAGCTGCAACCACCCCCTCCGGACAGGCCTGATTTCTGAGTTGTCTCTGGGAGAAATGTTCTTTATAAGATCACGTGCATGAGGGTAGAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGCCAACTAGAAACTACACAGGCAGATGTTGCTGTCGTGAAAAATAGTAGGTAGAATTAACACACTTAAAAATCCATTCTATggccgggcacggtgactcacgccagtaatcccagcactttgggaggcccaggcaggcagatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctatactaaaaataac-aaaaattagccT-ATTTTTGAAACCCCTTAAACATTACC-AGcccataaatgtctgctctttggattagtctttgaattcagtattaacatctttcccgttccctcgttaatagtaagctaaataaaaacttgtgtccattttatccttctagaagagtaa----tttttttttttatctttttg-gaaaaAAAAAA----------AAACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 102893153 1170 - 106955855 -------AAAACAAAAAAGAAGGACGTTTCCACCTCTATGTGGCACAGAAAAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGCTCCAGGTGAAGGTGGGACGCTGTGGCTCCCCCTC-TTCCATGTTTGTACATGGGCACCGCCATCTGTCTGCTTCCTTGTGGGAGCCCATGAAGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCGGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCCGGAGATATTACAGCCAGAAATGGGGTCTCCCTTCACTTTGGCTGCATCTGTCTAATCTGTCCTCCTCTCACCAAGGGCCAGGACGTAGCAGCAAACAGACCCGGTGCCTTCTTGATTCAGCCCCTTCCAGGTGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCGTGGAGGCGGCTCCATCTCCCC------------------------TGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGTCACACCGGGACATCTGTCCCACACATGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCGCAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGGAGCAGCTGCAACCACCCCCTCTGGACAGGCCTGATTTCTGAGTCGTCTCTGGGAGAAATGTTCTTTGTAAGATCATGTGCATGGGGGTACAT--GGACAGCATGCAGTATATTTGAGAAGAGATAGCCAACTAGAAATTATGTAGGCAGACGTTGCTGTGGTGAAAAGTAGTAGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacagtggctcatgcctgtactcccagcactttgggaggcccaggcaggtggatcacctgagg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctatactaaaaataac-aaaaattagccTCatttttgaatccccttaaacattacc-agcctataaatatctgctctttggattattctttgaattcagtattaacatctttcccatttcctcgttaatagtaagctaaataaaaacttgtgtccattttaaccttctagaagagtaa---ttttttttttttacctttttgaaaaaAAAAAAA----------ACACTTTACCAAAATATATTTAAGATCAAGAATGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60156890 1179 + 64156825 ---------aaaaaaaaaaaaGGACATTTCCACCTCTATGTGGCACAGCACAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGAGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTACCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCATCTATCTGATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAATGGACCCGGAGTCTTCCTGATTCAGCCCCTTCCAGGGTAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAAGAGGCTGCATCTCCCC--------------------TGTGTGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCGGGACAGCAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCACTATATTTGAGAAGAGATAGCCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggcccaggcaggacaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaataac-aaaaattagccTCatttttgaatccccttaaacattacc-agcctgtaaatgtctgccctttggattattctttgaattcagtattaatatttctcccattcccttgttaatagtaagctaaataaaaacttgtgcccattttatccttctagaagagtaa----tttttttttttacctttttg-gaaaaAAAAAAAAAAAGAAAGAAACTTTACCAGAATATATTTAAGATCAAGAATGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55256001 1161 + 59248254 ---------aaaaaaaaaaaaGGACATTTCCACCTCTATGTGGCACAGCACAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGAGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTGCCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTACCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAATGGACCCGGAGTCTTCCTGATTCAGCCCCTTCCAGGGGAGAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCATGGAAGAGGCTGCATCTCCCC--------------------TGTGTGTGTGTGTGTGAAAAACAGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTCTGGAAGAGTTGATGCTCCTGGACAGCAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCACTATATTTGAGAAGAGATAGCCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGCAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggcccaggcaggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaataac-aaaaattagccTcatttttgaatccccttaaacattacc-agcctataaatgtctgctctttggattattctttgaattcagtattaatatttttcccgttcccttgttaatagtaagctaaataaaaacttgtgtcca---------tctagaagagtaa---ttttttttttttacctttttg-aaaaaAAAAAA----------AAACTTTACCAAAATAAATTTAAGATCAAGAATGCTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47347132 1179 + 51301725 ----aaaaaaaaaaaaaaaaaggacatttccACCTCTATGTGGCACAGCAAAGGAAGTCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGGGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGATGGGCACTGCCATATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTCTCATTTCCCCAGGGCTTGTCCTGGGGGTGAACACCAGGCTCTCTGGAGATATTACAGATAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCAGCAAACAGACCCGGGGTCTTCCTGATTCAGCCCCTTCCCGGTGAGAGGGACTGACggctcctccttccctctcagaGCCTCCCCATGGAGGAGGCTGCAtctcccc----------------tgtgtgtgtgtgtgtgtgtgaaaaacaGGCTGTCTGTGGTATTGCCACACCTGGACATCTGTCCGACGTGTGAGTGGGAGGTCACATTGGACTCCGCCTTGCCAGCCATGACCTTGGGCAGATGCTAAGTGTGGAAGAGTTGATGCTCCGAGACAGTAGGAGCTGCAACCATCCCCTCGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAC--GGACAGCATGCAGTATATTTGAGAAGAGACAGCTGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATtctatggccgggcacggtggctcacacctgtaatcccagcactttgggaggcccaggcgggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaaccccatctctatactaaaaattttaaaaaattagcctcaTTTTTTAATCCCCTTAAACATTACC-AGCCTATAAATGTCTGCTCTTTGGATTATTCTTTGAATTCAGTATTAATATTTTTCCCGTTCCCTTGTTAATAGTAAGCTAAATAAAAACTTGTGTCCATTTTATCCTTCTagaagagtaa----tttttttttttacctttttg-gaaaaaaaaaa----------aaactttaccaaaataaatttaagatcAAGAATGCTAG i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47056247 1176 + 50890351 ----aaaagaaaaaaaaagaaGGACATTTCCACCTCTATGTGGCACAGCAAAGGAAATCCAGGTTCCTCACAGACAGGGAGGAACC-AGGGATCCAGGTGAAGGTGGGACGCTGTGGTTCCCCCTC-TTCCATGTTTGTAGAGGGGCACTGCCAGATCTCTGCTTCCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCAGGAGCCCAGCTGTCATTTCCCCAGGGCTTGTCCTGGGGGTGCACACCAGGCTCTCTGGAGATATTACAGACAGAAATGAGCTCTCCCCTCACTTTGGCTGCGTCTATCTAATCTGTCCTTGTCTCACCAAGGGCCAGGATGTAGCGGCAAACAGA-----------------------CCTTCCCGGTGACAGGGACTGACGGCTCCTCCTTCCCTCTCAGAGCCTCCCCGTGGAGGAGGCTGCATCTCCCCTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAAACAGGCTGTGTGTGGTATTGCCACACCTGGACATCTGTCCCACGTGTGACTGGGAGGTGACATTGGACTCCGCCTTGCCAGCCACAACCTTGGGCAGATGCTAAGTTTGGAAGAGTTGATGCTCCTGGACAGTAGGAGCTGCAACCATCCCCTTGGGACAGGCCTGATTTCTGAGCCATCTCTGGGAGAAGTGTTCTTTGTAAGATCTTGTGCATGGGGG-AGAT--GGAGAGCATGCCGTATATTTGAGAAGAGATAACCGACTAGAAATTACATAGGCAGATGTTGCTGTGGTGAAAAGTAGTGGGTAGAATTAACACACTTAAAAATCAATTCTATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcccaggcgggtgaatcacctgaga-tcaggaattcaagaccagcctggccaacatgatgaaattccatctctatactaaaaataaa-aaaaattagccTCGTTTTTGAATCCCCTTAAACATTACC-AGcctataaatgtctgccctttggattattctttgaattcagtattaatagttttcccgttcccttgttaatagtaagctaaataaaaacttgtgcccattgtatccttctagaagagtaatttttttttttttttacctttttg-ggaaaAAAAAAA---------AAACTTTACCAAAATAAATTTAAGATCAAGAATGCTGG i chlSab2.chr6 I 18727 C 0 s calJac3.chr22 45566052 1151 + 49145316 aaaaagaaagaaagaaagaaagGACATTTCCATCTCTGTGGGGGACAGAAAAGGAAGTCCAGGTTCCTGACAGATAGGGAGGAACC-AGGGCTCCAGGTGAAGGTGGGAAGCTGTGCCCTGGCATC-TTC--TGTTTGTACATGGGCACTACCGTATCTCTGCTTGCTGGTGGGAGCCCATGAGGGGCAGAAAGAGGAACTGCCCCTCCCCGGGAGCCTGGCTCTCATTTCCCCAGGGCTTGTTCTGGGAGTGAGCACCAGGCTCTCTGGAGCTATT--AGTCAGAAATGGGGTCTCCCCTCACCTTAGCTG---CTGTCCAATCTGTCCTCATCTCACCAAGGGCCAGGATGTGGCAGCAAATAGACCCGCTGCCTTCCTGAGTCACCCCCTTCCAGGCGAGACAGATTGACAGCTCCTCCTTCCCTCTCAGAGCCTCCCCACAGAGAAGGTTCCGTCTCCGT-----------------GTGTGTGCGCGCGTGTGTGAAAAACA----GTCTGTGGTATTGTCACACCTGGAAGTCT-TCCCACGTGTGGCTGGGAGGTCACACTGGACTCTGCCTTGACAGCTACAGCCTTGAGAAGATGCTAAGTTTAGAAGAGCTGATTTTCCTAGACAGAAGCAGCTCCCACAATCCCCTCTGGACAGGTCTGATTTCTGAGTCACGTCTGGGAGAAATGTTCTTCGTAAGATCATGTGCATGGGGGAAGATGGGGACAGCATGCAGCATATTTGAGAAGAGACAGCCAACTAGAAATTATGTAGGCAGATGCTGTGGTGGTGAAAAGTAGTAGGTTTAATTAACGCTCTTAAAAATCAATTCTATggccaggcacgatggctcat-cctgtattctcagcactttggaaagcccaggagggtagatcacctgaggttcagaagtttgagaccagcctggccaacagggtgaaaccctgtctctacactaaaaat-gc-aaaaattagccTTATTTTTGAACTCCTTTAAACATGACCAAACATCTCAACGTCTGCTCTTTGCATTCTTC--------AAGTATTAACATCGCTCCAGTTCCCGCATTAAG-------TTAATAAAAACGTGTGCACATTTTATCCTTGTACAACAGGAA-------TTTTTTTTACCTTTTTG----TAAAACAA----------AAACTTTACCAAAATATATTTAAGATAAAAAATGCTGg i calJac3.chr22 C 0 I 298 e canFam3.chr1 19746457 10348 - 122678785 I a score=3150835.000000 s hg38.chr19_GL949753v2_alt 322314 1465 + 796479 TCATAAGCTGTGAAAATCTATGTCTTGTCTTAATCattccatcagcat-aaaaaatgtagcaatgcatgtgaagtgttggttccaggcaaacctgcttaagactcaatgttcaaggttgttattaggt-gggggccatataggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGCTGTTCATCAGCA-TTTTT------TTTTTTTT----ACAAACTCATCAACAGTGAGCTACATTGTTTGCGGAAAT-GGCCTAGTCAAGACACAGTAGAATTCAGTGCTGCAGTCACACAACACCAGCTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTAAGGACCAACTTTACAAGCAAACTCTCCCAACGTTATCACCCTTGCAGCTGTGAGATTAACTCGTTCTTGCACACCCTGTACCTGAAAAAAATAATAGTCCTCTTGAATGCAGCAGCACCTTGTTCACCCGGAACATGCCTCC-GCTCCTCCAGATTCTTCCCGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGCAGTAAATCCACACTCAACTTGAGTTTTCATGAGGGAAGCCGTCTGGGGCCTTCTCTGGCTGTGCTGAGCCTGAACGAGCATCCCCCAGAGGCCACCGGGATCAACACAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGGCTGGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTCCCAGTTATTCCTCACTATGGGTCTATACTTGGTGGAGGTTGGTTGAGAGGATCAGGGACTCtgtatgcgtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagacgtttaattgactcacagttccatatgtctggggaggcctcatgaaacttacaatcatggtggaaggcacctctt-attgggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccattagatctcatgagaactcactcattatcacgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtcctgcccttgacatgtggggattattataatccaaggtgggatttgggtggagacacagaacc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACACCTATGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATTGTATCCCCCGACCAGGGCGTATAACCCACCATTGTATCC-CCCAACCAGGGCACGTAACCCACCATTGTAT-CCCCCCC-AGGGCGTGTA----------------------------------ACCATTGTATCC-CCCCACCAGGGCATGTAACCCACCATTGTATCCTCCCCA-------------------------CCTCCAGGGCATGTAACCCACCACTGTATCC-----------------------------------C s panTro4.chr19 59274793 1403 + 63644993 TCATAAGCTGTGAAAATCTATGTCTTGTCTTAATCattccatcagcat-aaaaaatgtagcaatgcatgtgaagtgttggtttcaggcaaacctgcttaagactcaatgttcaaggttgttattaggt-gggggccatataggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGCTGTTTATCAGCATTTTTT------TTTTTTTT----ACTAACTCATCAACAATGAGCTACATTGTTTGCAGAAAT-GGCCTAGTCAAGACACAGTAGAATTCAATGCTGCAGTCACACAACACCAGcttatctcttaggaacatagggaacattccaggagccatgtttaggaactagatgccagctaaggaccaactttacaagaaaaccctcccaacgttatcacccttgcagctgtgagattaactccttcttgcacaCCCTGTACCTGAAAAAAATAATAGTCCTCTTCAATGCAGCAGCACCTTGTTCACCTGGAACATGCCTCCGGCTCCTCCAGATTCTTCCCGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGCAATAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCGTCTGGGGCCTTCTCTGGCTGTGCTGAGCCTGAACGAGCATCTCCGAGAGGCCACCAGAATCAACGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTGGAGGGGCGTGGTCAGTAGACGGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACATTCCAGAAAGGGGAGTCCCAGTTATTCCTCACTATGGGTCTATACTTGGTGGAGGTTGGTTGAGAGGATCAGGGACTCtgtatgagtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagacgtttaattgactcacagttccacatgtctggggaggcctcatgaaacttacaatcatggtggaaggcacctctt-attgggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcgttatcgcgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtcctgcccttgacatgtagggattattataatccaaggtgggatttgggtggagacacagaacc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCTATGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATTGTATCCCCCCACCAGGCCGTATAACCCACCATTGTATCC-CCCCACCAGGGCACCTAACCCACCATTGTAT-CCCCTCA-----------------------------------------------------------------------------------------------------------------------------CCAGGGCATGTAACCCACCACTGTATCC-----------------------------------C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56131766 1397 + 60714840 TCATAAGCTGGGAAAATCTGTGTCTTGTCTTAATCattccatcagcataaaaaaatgtagcaatgcatgtgaagtgttggttccgggcaaacctgctcaagactcaatgttcaaggttgttattaggt-ggggaccatataagcaTAATGGTCAGTCGCAGGGAAACCAGGGAAAAGCTAGTGTTCATCAGCATTTTTT------TTTTTTTT----ACTAGCTCATCAACAACGAGCTGCATTGTTTGCAGAAACGGGCTTGGTCAAGACACGGTAGAATTCAATGCTGCAGTCACAGAACACCAGCTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATATTTAGGAActagatgcccgctaaggaccaactttgcaagcaaaccct-ccaacgttatcacccttgcagctgtgagattaactccttcttacacaCCCTGCACCTGAAAAAAATGATAGTCCTCTTGAGTGCAGCAGCACGGTGTTCACCCGGAACACGGCTCCAGCTCCTCCAGATTCTTCCGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTGCTGAGCCGGAACGAGCATGCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCACTGGGAAGAGATTCTCCATGGCAGAGTCTGGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGCTGAGGGC-CAGACTGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCCCAAAAGGGGAGTTCCAGTTATTCCTCACTATGGGTCTCTACTTGGTGGAGGATGGTTGAGAGGATCAGGGACTCtgtacgagtctgttctcactctgctatgaagaactacccaagactgggtaatttataagaaaagaggtttagttgactcacagttccacatgtctggggaggcctcatg------------atggtggaagacacctcttcatagggcggcaggagagagaatgagagtggaacgaagggggacgccccttataaaaccatcagatctcgtgagaactcactcattatcacgagaacagtacaggggaaacc----gcccccatgattcaataatctccacctggtgccgcccttgacacgtggggattattataatccaaggtgggatttgggtggagacacagagcc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCAAAGAATAAGAATGAGGTGGGGCATGAGTAGCCAGACCACCATCGTATCCCCCCACTAGGGTGTATAACCCACCATTGTATCC-CCCCACCAGGGCACGTAACCCACCTTTGTAT-CC------------------------------------------------------------------------------------------------TCCCCA-------------------------CCTCCAGGGCATGTAACCCACCACTGTGTCC-----------------------------------C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102894323 1541 - 106955855 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAGTCattccatcagcataaaaaaatgtggcaatgcatgtgaagtgttggttgcaggcaaacctgcttaagactcaatgttcaaggtcgttattaggt-gggggccatatgggcaTAATGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCATCAGCA---TTT------TTTTTTTT----ACTAGCTCATCAACAGTGAGCTACATTGTTTGCAGAAAT-AGCCTAGTCGAGACACAGCAGAATTCAATGCTGCAGTCACACAACACCAGCTTATCTCTTAGGAACA-AGGGAACATTCCAGGATCCATGTTTAGGAACTAGATGCCAGCTAAGGACCAACTTTACAAGCAAACCCTCC--------------------CTGTGAGATTAACTCCTTCTTGTACACCCTGCACCTGAAAAAAATAATAGTCCTCTTGAATGCAGCAGCACGGTATTCACCCGGAACATGCCTCCAGCCCCTGCAGATTCTTCCGGGCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCACACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAACGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCACGGCAGAGTCTGGAGGGGCGTGGTCACTAGACAGAATGGAGCATTTGCTGAGGGC-TAGACTGGCCACACTCACCTCGGAAGCCCTGGATGGGTGTTTACACATCTACACTCCCGAAAGGGGAGTTTCAGTTATTCCTCACTATGAGTCTACACTTGGTGGAGGATGGCTGAGAGGATCAGGGACTCtgtacgagtctgttctcactctgctgtggagaactatccaagactgggtaattgataagaaaagaggtttagttgactcacagttccacatgcctggggaggcctcatgaaacttacaatcatggtggaagacacctctttatagggcggcag----gagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcactatcacgagaacagtatgggggaaaccaactgcccccatgattcaataatctccacctggtcccactcttgacatgtggggattattacaattcaaggtgggatttgggtagagacacacagcc--------------------------------------------------------------------------------------------------------------------------gaaccatatcaGACGCCTATGAATAAGAATGAAGTGGGGCATGAGTAGCCAGACCACCACTATATCCCCCCACCAGGGCGTGTAACCCACCATTGTATCCTCCCCACCAGGGCGTGTAACCCACCATTTTAT-CCCCCTC-AGGGTGTGTAACCCACCACTGTATCCTCCCAGGGCGTGTAACCCACCATTGTATCCTCCCCACCAGGGTGTGTAACCCACCATTTTATCCCCCTCAGGGTGTGTAACCCACCATTTTATCCCCCTCAGGGTGTGTAACCCACCATTGTATCCTCCCCACCAGCGTGTGTAACCCACCATTGTATCCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60158069 1552 + 64156825 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAACCattccatcagcat-aaaaaatgtagcaacacatgtgaagtgttggttccaggcaaacctgcttaagactcaatgttcaaggttgttattaggtgggggaccatataggcaTAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTCCGCCAGCTtttttttttttatttttatttttaACTAGCTCATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagatgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttggagctgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGTACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCCGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAAGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCACTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaaggggtttaattgactcacagttctacatgtctggggaggcctcatgaaactgacaatcatggtggatggcacctcttcacagggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactcactat--------cagtacagggaaaact----gcccccatgattcagtaatctccatctggtcccacccttgacaggtggtgattattacaattcaaggtgggatttgggtggggacacagagccaaaTTTc------------------------------------------tccacctggtttcatgattgatacatggggattattacaattcaaggtgagatttgggtggggacacagagctaaaccatattaGACGCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCACCCTACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCACTGTAT-CCCCCACCAGGGCGTGTA------------------------------ACCCACCACTGTAT-C-CCCCACCAGGGCGTGTAACCCACCACTGTATCCCC-----------------------------CCCCCAGGGCATGTAACCCACCATTGTATCC-----------------------------------C i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55257162 1542 + 59248254 TCGTAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAaaaatgtagcaacacatgtgaagtgttggttccaggcaaaccggcttaagactcaatgttcaaggttgttattaggt-ggggaccacataggcataaGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGTTCACCAGCttttttt------tttttttttttAACTAGCTCATCAACAGTGAGCTACACTATTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAATGCTGCAGTCACACAACCCCAGTttatctcttaggaacgtagggaacattccaggagccatgtttaggaactagacgccagctcaggaccacctttacaagcaaaccctcccaacgttatcccccttgcaactgtgagattaactccttcttgcacaACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCTGGCCCTATCTCAG-TTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGCCATCTGGGGCCTTCCCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTTACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaagtggtttaattgactcacagttctacatgtctggggaggcctcatgaaactgacaatcatggtggatggcacctcttcacagggcggcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgaga----actcactat--------cagtacagggaaaact----gcccccatgattcagtaatctccatctggtcccacccttgacaggtggtgattattacaattcaaggtgggatttgggtggggacacagagccaaatttc------------------------------------------tccacctggtttcatgattgatacatggggattattacaattcaaggtgagatttgggtggggacacagagctaaaccatattaGACTCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCACCCTACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCACTGTAT-CCCCCACCAGGGCGTGTA------------------------------ACCCACCACTGTATCC-CCCCACCAGGGCATGTAACCCACCATTGTATCCCT-----------------------------CCACCAGGGCATGTAACCCACCATTGTATCC-----------------------------------C i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47348311 1557 + 51301725 TCGTAAACTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAAAAATGTAGCAACAC--GTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTCAAGGTTGTTATTAGGTGGGGCACCACGTAGGCATAAGGGTCAGTCACAGGGAAACCAGGGAAAAGCTGGTGtttgccagctttttttttt---ttttttttttaaactagcttATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCCATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGaaaaaaaTAACAGTCGTCTTGAATGCAGCAGCACGCTGTTCACCCAGAACATGCCTCCAGCTCCTCCAGACTCTTCCGGCCctatctcagttttttttttgccGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTCATGAGGGAAGTCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCATGGTCAGTAGACAGAATGGAGCATTTGGTGAGGGCTTAGACAGATCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTGGAAAGGGGAGTTCTAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCCACCACTCTGTATGagtctgttctcactctgctagGAAGAActatccgagactgggtaatttacaagaaaagtggtttaactgactcacagttctacctgtctggggaggcctcatgaaactgacaatcatggtggaaggcacctcttcacagggcagcaggagagagaatgagagtggagcgaagggggaagccccttataaaaccatcagatctcgtgagaactcactgactatcacgagaacagtacagggaaaact----gcccccatgattcagtaaTCTCCatctggtcccacccttgacaggtggggattattacaattcaaggtgggatttgggtggggacacagagccaaatttCTCTACCTGGTTTCATgattgacacatggggattattacaattc------------------------------------------aaggtgagatttgggtggggacacagagccaaaccatatcagactcCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCCCCCCACCAGGGCATGTAACCCACCATTGTATCC-CCCCACCAGGACGTGTAACCCACCATTGTATCCCCCCACCAGGGCATGTA------------------------------ACTCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCATTGTATCCCC-----------------------------CCACCAGGGCGTGTAACCCACCATTGTAT-C-----------------------------------C i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47057423 1443 + 50890351 TCATAAGCTGTGAAAATCTGTGTCTTGTCTTAATCATTCCATCAGCAT-AAAAAATGTAGCAACACATGTGAAGTGTTGGTTCCAGGCAAACCCGCTTAAGACTCAATGTTCAAGGTTGTTATTAGGTGGGGGACTATATAGGCATAAGGGTCAGTCACAGGGAAAGCAGGGAAAAGCTGGTGTCCACCAGCTTTTTTT------TTTTTGGTTTTAACTAGCTCATCAACAGTGAGCTACACTGTTTGCAGAAAC-AGCCTAGTCAAGACACAGCAGAATTCAGTGCTGCAGTCACACAACCCCAGTTTATCTCTTAGGAACATAGGGAACATTCCAGGAGCTATGTTTAGGAACTAGATGCCAGCTCAGGACCACCTTTACAAGCAAACCCTCCCAACGTTATCCCCCTTGCAGCTGTGAGATTAACTCCTTCTTGCACAACCTGCACCTGAAAAAAATAACAGTCCTCTTGAATGCAGCAGCACGCTGTTCCCCCAGAACATGCCTCCAGCTCCTCCAGATTCTTCCAGCCCTATCTCAGTTTTTTTTCTGCAGATTCTCCAAGGTTCTGCAAACTGTAAGTAGTAAATCCATACTCATCTTGAGTTTTTATGAGGGAAGTCATCTGGGGCCTTCTCTGGCTGTACTGAGCCTGAAGGAGCATCCCCCAGAGACCACCAGGATCAAGGCAGCATGGTCATTGGGATGAGATTCTCCATGGCAGAGTCTAGAGGGGCGTGGTCAGTAGACAGAATAGAATATTTGCTGAGGACTTAGACAGGCCACACTCACCTTGGAAGCCCTGGATGGGTGTTTACACATCTACACTCTAGAAAGGGGAGTTCCAGTTATTCCTCACTGTGGGTCTATACTTGGTGGAGGATGGTTGAGAGGATCAACCACTCtgtatgagtctgttctcactctgctaggaagaactatccgagactgggtaatttacaagaaaagtagtttaattgactcacagttctacctgtctggggaggcctcatgacacttacaatcatggtggaaggcacctcttcacagggcagcaggagagagaatgagagtggagcgaa-ggggaagccccttataaaaccatcagatctcgtgagaactcactcactatcacgagaatagtacagggaaaact----gcccccatgattcagtagtctccatctggtcccaccctccccaggaggggattattacaattcaaggtgggatttgggtggggacacagagcc--------------------------------------------------------------------------------------------------------------------------aaaccatatcaGACTCCTATGAATAAGAATGAGGCGGGGCATGAGTAGCCAGGCCACCATTGTATCCCCCCACCAGGGCGTGTAACCCACCATTGTATCC-CCCCACCAGGGCGTGTAACCCACCATTGTAT-C--------------------------------------------------------------C-CCCCACCAGGGCGTGTAATCCACCATTGTATCCCC-----------------------------CCACCAGGGCGTGTAACCCACCATTGTATCC-----------------------------------C i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=57609.000000 s hg38.chr19_GL949753v2_alt 323779 31 + 796479 CCCACCAGGGTGTGTAACCCACCATTTTATC s panTro4.chr19 59276196 31 + 63644993 CCCACCAAGGTGTGTAACCCACCATTTTATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133163 31 + 60714840 CCCACCAGGGTGTGTAACCCACCACTGTATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895864 31 - 106955855 CCCACCAGGGTGTGTAACCCACCATTTTATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159622 31 + 64156825 CCCACCAGGGTGTGTAACCCACCATTGTATC i rheMac3.chr19 I 1 I 3 s macFas5.chr19 55258705 31 + 59248254 CCCACCAGGGTGTGTAACCCACCATTGTATC i macFas5.chr19 I 1 I 3 s papAnu2.chr19 47349869 31 + 51301725 CCCACCAGGGCGTGTAACCCACCATTGTATC i papAnu2.chr19 I 1 I 3 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47058866 7 + 50890351 I a score=45943.000000 s hg38.chr19_GL949753v2_alt 323810 50 + 796479 CCCCTCAGGGTGTGTAACCCACCATTGTATCCCCGT-------------------------------------CCAGGGCCTGTAAC s panTro4.chr19 59276227 50 + 63644993 CCCCTCAGGGTGTGTAACCCACCATTGTATCCCCCG-------------------------------------CCAGGGCATGTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133194 18 + 60714840 CCCC---------------------------------------------------------------------CCAGGGCGTGTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895895 79 - 106955855 CCCCTCAGGGTGTGTAACCCACCATTTTATCCCCCT-------CAGGGTGTGTAACCCACCA-CTGTATCCTCCCAGGGCGTGTAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159656 87 + 64156825 TCCACCAGGGCGTGTAACCCAGCATTGTATCCCTGCCGCCGCCCAGGGTGTGTAACTCACCATCAGTCCCCCACCAGCGTGTGTAAC i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55258739 87 + 59248254 TCCACCAGGGCGTGTAACCCAGCATTGTATCCCTGCCGCCGCCCAGGGTGTGTAACTCACCATCAGTCCCCCACCAGCGTGTGTAAC i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47349903 50 + 51301725 -CCACCAGGGCGTGTAACCCACCATTGTATC------------------------------------CCCCCACCAGGGCGTGTAAC i papAnu2.chr19 I 3 I 136 s chlSab2.chr6 47058873 49 + 50890351 CCCCCCAGGATGTGTAACTCA--------------------------------------CGATCAGTCCCCCACCAGCATGTGTAAC i chlSab2.chr6 I 7 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=1594761.000000 s hg38.chr19_GL949753v2_alt 323860 702 + 796479 CCACTATGCCCTGGCTCCTTCACAACTCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACCCCAACTCCCAGCTTGGGCTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAGACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGAATGCTTAACTCTGCTATTCCCTGGTCTCAGATTAGTCCCAAAATTAGTTAAACCTAAGCCTCACGCTTTGACCTCTAGTAATGCGTCAGCTGTCAGTATGGAATCCATAGATCTGCATGTGGGGCTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCTTTTCttttctttc--------tttctttctttttttttctgagatggagtctcgctctgttgcccaggctggagtgcagtggtgcaatctcagctcactgcaagctccgcatcccggggtcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatctacccgcctctgcctcccaaagtgctgggattacagg s panTro4.chr19 59276277 707 + 63644993 CCATTATGCCCTGGCTCCTTCACAGCTCTCCTCCCTTCTCATGGGAGAATTGTGTGAGATCCTTGCTGACCCCAACTCCCAGCTCGGGCTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAGACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTCTGCTATTCCCTGGTCTCAGATTAGTCCCAAAATTAGTTAAACCCAAGCCTCATGCTTTGACCTCTAGTAATGCATCAGCTGTCAGTATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCTTTTCTTTTCtttctttct---tttctttttttttttttctgagatggagtctcactctgttgccaaggctggagtgcagtggtgcaatctcagctcactgcaagctccgcatcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccaccatgcccgtctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctctgcctcccaaagtgctgggattatagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133212 706 + 60714840 TGACTATGCCCTGGCTCCTTCACAACTCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACACCAACTCCCAGCTCGGACTTAGAACCCTATGGTCCCTTCCTCAAATATGTTCAGATTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGG-TTTTACAACAGCTCGGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTCTGCTCTTCCCTCGTCTCAGATTAGTCCCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCAAGATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATATGAAGCAGCCAAAGGCTGTGACTGCCttttcttttctttctttc----cttttttttttttttttttgagatggagtctcgctctgtcgcccgggctggagtgcagtggtgcaatctcggctcactgcaagctccgcatcccaggttcacgccattcgcctgcctcagcctcccaagtagctgggactaccggagcccgccaccatgcccggctaattttttgtatttttagtagggacaaggtttcactgtgttagccaggatggtcttgatctcctgaccttgtgatccgcccgcctctgcctcccaaagtgctgggattacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102895974 707 - 106955855 CCACTATGCCCTGGCTCCTTCACAACCCTCCTCCCTTCTCATGGGAGAATTGTATGAGATCCTTGCTGACCCCAACTCCCAGCTCGGGCTTAGAACTTTATGGTCCCTTCCTCAAATATGTTCAAGTTCCTGGGCCTTGTCGAAGTCACAAACAA---CTCAGCTGCAGAGATACTGCAGGTTTGG-TTTTACAGCAACTCAGGGACAGAGGACAAAAATCTCCAACCTCTGGGATGCTTAACTTTGCTCTTCCCTGGTCTCAGATTAGTCCCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCAATATGGAATCCATAGATCTGCATGTGGGACTCCTGGTGTCCCAGGGCCAGGAATACGAAGCAGCCAAAGACTGTGGCTGCCTTTTCTTTTCTttctttctttctttttttttttttttttctgagatggagtcttgctctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaagctccgcctcccaggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgtctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccacccgcctctgcctcccaaagtgctgggattacagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60159743 700 + 64156825 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGTCCCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGACGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCCAGTAATGCATCACCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTATGAATCAGCCAAAGGCTGTGACTGCCTTTCCttgtctttc--------tt--tttttttttttttttgacaaaaagactcgctctgtcgctcaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcacgtgccaccacgcctgggtaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtcgcgatctcctgacctggtgatctgcccaccgcaccctcctaaaatgctgtgattacagg i rheMac3.chr19 C 0 I 16 s macFas5.chr19 55258826 698 + 59248254 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGTCCCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGACGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAAAATTAGCTAAACCCAAGCCTCACCCTTTGACCTCCAGTAATGCATCACCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTATGAATCAGCCAAAGGCTGTGACTGCCtttccttttctttc------------tttttttttttttttgacacaaagtctcgctctgtcgctcaggctggagtgcagtggcgtgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcacgtgccaccacgcctggctaattttttgtatttttagtagagacagggcttcactgtgttagccaggatggtctcgatctcctgacctggtgatctgcccaccgcagcctcctaaaatgctgtgattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350089 695 + 51301725 CCACTATGCCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCAACTCCCAGCTCAGGCTTAGAACCCTATGGCACCCTCCTCAAACGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCCGCAGAGATACTGTGGGTTTGGTTTTTACAACAACTCAGGGACAGAGGACAACAATCTCCAGCCTCTGGGATGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAACATTAGCTAAACCCAAGCCTCACCCTTTGACCTCTAGTAATGCATCAGCTGTCGATATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTCTGAATCAACCAAAGGCTGTGgctgcctttccttttct---------------ttttttttttttgttgacatgaagtctcgctctgtcacccaggctggagtgcagtggcgttgtcttggctcactgcaacctctgcctaccaggttcaagtaattctcctgcttcagcctcctgagaagctggtattacaggcacgtgccaccacgcctggctaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtctcgatctcctgacctggtgatctgcccacctcggtctcccaaagtgctgtgattacagg i papAnu2.chr19 I 136 C 0 s chlSab2.chr6 47058922 698 + 50890351 CCACTATGTCCTGGCTCCTTCACA-CTCTCCTCCCTTCTCATGGGGGAATTGTATGAGATCCTTGCTGAACTCACCTCCCAGCTGAGGCTTAGAACCCTATGGCACCCTCCTCAAATGTGTTCAGGTTCCTGGGCCTTGTTGAAGTCACAAACAACTTCTCAGCTGCAGAGATATTGCGGGTTTGGTTTTTACAACTATCCAGGGACAGAGGACAACAA-CTCCAGCCTCTGGGATGCTTAACTCTGCTCTTCTCTGGTCTCAGATTAGTCTCAACATTAGCTAAACCCAAACCTCACCCTTTGACCTCCAGTAATGCATCAGCTGTCAGTATGGAATCCATAGATCTGCATGTAGGACTCCTGGTGTCCCAGGGCCAGGACTGTGAATCAGCCAAAGGCTGTGGCTGCCtttccttttctttc--------t---ttttttttttttgttgacacgaagtctcgctctgtcgcccaggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcccgggttcaaacaattctcctgcctcagcctcctgagtagctgggattacaggtacgtgccaccatgcccggctaattttttgtatttttagtagagacagggcttcaccgtgttagccaggatggtctcgatctcctgacctggtgatctgcccaccgcagcctcccaaagtgctgtgattacagg i chlSab2.chr6 C 0 I 9 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=19636.000000 s hg38.chr19_GL949753v2_alt 324562 22 + 796479 tgtgagcaactgtgcctggcc--t s panTro4.chr19 59276984 24 + 63644993 cgtgagccaccatgcctggccttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133918 22 + 60714840 cgtgagccaccatgcctggcc--t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896681 22 - 106955855 tgtgagccaccatgcccggcc--t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55259524 22 + 59248254 cataagccaccgcgcccagcT--T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350784 22 + 51301725 cataagccaccgcgcccagct--t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e rheMac3.chr19 60160443 16 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 324584 1 + 796479 t s panTro4.chr19 59277008 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133940 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896703 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47350806 1 + 51301725 t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160443 16 + 64156825 I a score=3438.000000 s hg38.chr19_GL949753v2_alt 324585 11 + 796479 atttttttttt s panTro4.chr19 59277009 11 + 63644993 ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56133941 11 + 60714840 ttttttttttt i ponAbe2.chr19 C 0 I 510 s nomLeu3.chr10 102896704 9 - 106955855 ttttttttt-- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160443 16 + 64156825 I a score=47212.000000 s hg38.chr19_GL949753v2_alt 324596 182 + 796479 ggtcagggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacttccgcctcccgggttcaagcgattctgctgcctcagcctcctgagtagctgggactacaggcatgtgccaccatacctgactaattttctgtatttttagtacagatgggacttca s panTro4.chr19 59277020 182 + 63644993 tggcagggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcctgagtagctaggactgcaggcatgtgccaccatgcctaactaattttctgtatttttagtacagatgggacttca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102896713 181 - 106955855 -ggcagggagtcttgctctgtcgcccaggctagagcacagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggactataggcatgtgccaccatgcctggctaattttctgtgtttttagtacagatgggacttca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160443 16 + 64156825 I a score=6823.000000 s hg38.chr19_GL949753v2_alt 324778 77 + 796479 tgttagccaggatggtctcgatctcctgaccccattatccgcttgcctcggccccccaaagtgctgggattacaggc s nomLeu3.chr10 102896894 77 - 106955855 tgttagccaggatggtctcgatctcctgactctgtgatccgcttgcctcggccccccaaagtgctgggattacaggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47059620 9 + 50890351 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160443 16 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1392.000000 s hg38.chr19_GL949753v2_alt 324855 7 + 796479 ctgagcc s nomLeu3.chr10 102896971 7 - 106955855 ctgagcc i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47059629 7 + 50890351 ccgcgcc i chlSab2.chr6 I 9 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e rheMac3.chr19 60160443 16 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1474.000000 s hg38.chr19_GL949753v2_alt 324862 4 + 796479 CGGC s nomLeu3.chr10 102896978 4 - 106955855 TGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60160459 4 + 64156825 cagc i rheMac3.chr19 I 16 C 0 s chlSab2.chr6 47059636 4 + 50890351 cagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e ponAbe2.chr19 56133952 510 + 60714840 I e calJac3.chr22 45567203 298 + 49145316 I e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e panTro4.chr19 59277202 0 + 63644993 C a score=134.000000 s hg38.chr19_GL949753v2_alt 324866 2 + 796479 CC s ponAbe2.chr19 56134462 2 + 60714840 CC i ponAbe2.chr19 I 510 C 0 s rheMac3.chr19 60160463 2 + 64156825 TT i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47059640 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102896982 0 - 106955855 C e papAnu2.chr19 47350807 0 + 51301725 C e macFas5.chr19 55259546 0 + 59248254 C e panTro4.chr19 59277202 0 + 63644993 C a score=1000.000000 s hg38.chr19_GL949753v2_alt 324868 1 + 796479 C s ponAbe2.chr19 56134464 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60160465 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55259546 1 + 59248254 C i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47059642 1 + 50890351 C i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102896982 0 - 106955855 C e papAnu2.chr19 47350807 0 + 51301725 C e panTro4.chr19 59277202 0 + 63644993 C a score=1845895.000000 s hg38.chr19_GL949753v2_alt 324869 1098 + 796479 CTTTTCTTTTTTTGT-ACCTCACTCAGCTCTCTGCATTCTCTGGTTCAACTTAATAGTACTACTAATAACCCAAGTAATAATCTCACTAT----TCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGAATAGTCATAGATTCCAAGTAACTTTTTCAGGAATAAGAAACACTATAGTGAACAAAACCTCCCATTGTTCATTCAATTTGTAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTATTATTTAAAAACAACACACAGAGGCATAAATGCACAAAATTTAAGCCACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAT--AAAAAAAAA-AAAAAACAGTGccagcctggccaacatggcgaaaccccatctctactaaaaacacaaaaattagttgggtctggtggtgggcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaatccaggagggagagattgcagtgagccgagatcttgccactgcactccatgctgggtgacagagggagactctgttaaaaaacaaaacaaaaacaaacaaacaaaa-----aAAAGCAGTGAGTACTAGGGGCAAAGATCACTTAACCCAGTTTGTCATTAAAAAAAA----------TGTTTTTGAGGATGTGACAGGTTAGGTAAAGACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGCGGTATTTTGATACCAGAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATATGAGAATGAGGAAACGGAAAAAGTGGTACAGAGCTGTATTTCCAGATGTGCAAACAGACGTATGAACATCGACATGTGCAATCAATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCGTGTGGAGAAATGTACATACACGGGGTGTCTCTGAGAGGAAACAGAATAAAGAGGTACTTGATTGCCTCTGGAGATGGAAATTGAGAAGATGGGAGCAAGGATCACCTCTATGCCCGTTGGTAAATATA s ponAbe2.chr19 56134465 1101 + 60714840 CTTTTCTTTTTTTGTTACTTCACTCAGCCCTC-GCATTTTCGGATTCAACTTAATAGTACTGCTAATAATCCAAGTAATAATCTCCCTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGAATAGTCATAGATTCCAGGTAACTTTTTCAGGAATAAGAAACCCTATAGTGAACAAAACCTCCCATTGTTCATTCAATTTATAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTTTTATTTAAAAACAACACCCAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAT--AAAAAAAAA-TAC---CAGTGccagcctggccaacatggtgaaaccctgtttttactaaaaatacaaaaattagttgggcctagtggcgtgcacctggaatcccagctactcaggagggtgaggcaggagaatcgcctgaatccaggagggagagattgcagtgagccaagatcttgccactgcactccatcctgggtgacagagggagattctgttaaaaaaaaaaaaaaaaaaaaaaaaa---aa-----aaaaGCAGTGAGTACTATGGGCAAAGATCAC-----CCAGTTTGTCataaaaaaaaaaaaaaaaaaatGTTTTTGAGGATGTGGCAGGTTAGGTAAAGACTGAACAATGAGCAAGAGGTGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGTGGTATTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAATGAGGAAACAGAAAAAGTGGTATAGAGCTGTATTTCCAGATGTGCAAACAGACATATGAACATCGACGTGTGCAATAAATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAACACGGCGTGTGGAGAAATGTACATACACTGGGTATCTCTGAGAGGAAACAGAATAAAGAGGTACTTGACCGCCTCTGGAGATGGAAATTGAGAAGATGGGAGGAAGGATCACCTCTATGCCCATTGGTAAATATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102896982 1086 - 106955855 --CCCCTCTTTTTGT-ACCTCACTCAGCTCTCTGCATTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATTTATTATTCTGCCCATTTATCTGTTTTGTTTTACAATTAATGACAGAATAATCATAGATTCCAAGTAACTTTTTCAGGAATAAGAAACACTATAGTGAATAAAACCTCCCATCGTTCATTCAATTTATAATAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGATGAACTATTATTTAAAAACAACACACAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTT-GAATGTGTGTTGCCCTTAC--AAAAAAAAA-TAC---CAGTGccagcctggccaacacggtgaaaccccatctctaccaaaaacacaaaaattagttgggcctggtggagtgcacctgtaatcgcagcttctcaggaggctgaggcaggagaatcgcttgaatccaggagggagagattgcagtgagcagagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaaaaaaaa----------------aa-----aaTAGCAGTGAGTACTAGGGGCAAAGACCACTTAACCCAGTTTGTCATAAAAAAAAA-----AAAAATGTTTTTGAGGATGTGACAGGTTAGGTAAAGACTGAACAATGAGGAAGAGGGGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGCGGTATTTTGATACCAAAAAATGCAGAAATGTTCCCAGTGTGTCTAAAATGTATTTGAGAATGAGGAAACGGAAAAAGTGGTATAGAGCTGTATTTCCAGATGTGCAAACAGACGTATGAACATCGACGTGTGCAATACATTGTTAACTGAAAATCAATACAGAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACAGCGTGTGGAGAAATGTACATGCACGGGGTATCTCTCAGAGGAAACAGAATAAAGAGGTACTTGACTGTCTCTGGAGATGGAAATTGAGAAGATGGGAACAAGGATCACCTCTATGCCCACTGGTAAATATA i nomLeu3.chr10 C 0 T 38 s rheMac3.chr19 60160466 1058 + 64156825 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCGTGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCAGGAATAAGAAACACTATAGTGAGCAAAACCTTGCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATAGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTTGTCCTTAT--AAAAAAAAA-TAC---CAGTGccagcctggccaacacggtgaaaccctgtctctactaaaaatacaaaaattagctgggcgtggtggcgcactcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatccgggagagggagattgcagtgagctgagatcttgccactgcattccatcctgggtgacacagggagactctattaaaaaa------aaacaaaaaaaaa---aa-----aaaaaCAGTGAGTACTAGGGGCAAAGATCACTCAACCCAGTTTGTCATAAAAAGAAA--------AATGTTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAACATTGCCCAACATAGGAGCAGATGATTGGGGTCTTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTGTAGAGCTGTATTTCCAGGTGTGCAAACAGATGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGA------------------------------AAACAGAATAAAGAGGTATTTGACTGCCTCTGGAGATGGA-----AGAAGATGGGAACAAGGATCACCTCTATGCACGTTGGTAAATATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55259547 1061 + 59248254 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCGTGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCAGGAATAAGAAACACTATAGTGAGCAAAACCTTGCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATAGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTTGTCCTTAT--AAAAAAAAA-TAC---CAGTGccagcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgcactcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatccgggagggagagattgcagtgagctgagatcttgccactgcattccatcctgggtgacacagggagactctattaaaaaa---aacaaacaacaacaaa---aa-----aaaaaCAGTGAGTACTAGGGGCAAAGATCACTCAACCCAGTTTGTCATAAAAAGAAA--------AATGCTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAATGAGCAAGAGGAGGATCCAGAAAGGTAATATTGCCCAACATAGGAGCAGATGATTGGGGTCTTTTGATACCAAAAAATGCAGAAATGTTCCTAGTGTGTCTAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTGTAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGA------------------------------AAACAGAATAAAGAGGTATTTGACTGCCTCTGGAGATGGA-----AGAAGATGGGAACAAGGATCACCTCTATGCACGTTGGTAAATATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47350807 1096 + 51301725 cttttctttttttgt-agctCACTCAGCTCTCCGCGTTCTCTGGTTCAACTTAATAGTACTACTAATAATCCAAGTAATAAT----CTATCTATTCTTCTGtccatttatctgttttgttttacaattaaTGAGAGACTAGTCATAGATTCCAAGTAACTTTCTCGGGAATAAGAAACACTACAGTGAACAAAACCTCCCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATtaagcaaaaatacaaaagagattaactattatttaaaaacaacacacaGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTGTtgtccttattaaaaaaaaaa-tac---cagtgccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtgctggcgtgcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaatcaaggagggagagattgcagtgagccgagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaa------aaaaaaaaaaaaa---aatagacaagagCAGTGAGTACTAGGGGCAAAGATCACTTAACCCAGTttgtcataaaaagaaa--------aatgtttgtgagGATGTGACAGGTTAGGTAAAAACTGAACAAAGAGCAAGAGGAGGATCCAGAAAGGTAATATTACCCAACATAGGAGCAGATGATTGGGGTATTTTGATAccaaaaaatgcagaaatgttcCTAGTGTGTCTAAAATGTATTTGagaatgaggaaatgaaaaaagTGGTATAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTgaaaatcaatacataaataaagtgagaaataaaaacacttatCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGAAATGTACATACAAGAGGTATCTCTGAgaggaaacagaataaagaggTACTTGACTGCCTCTGGAGATGGAAATGGAGAAGATGGGAACAAGGATCACCTGTGTGCCCGTTggtaaatata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47059643 1100 + 50890351 CTTTTCTTTTTTTGT-AGCTCACTCAGCTCTCCACGTTCTCTGGTTCAACTTAATAGTACTACCAATAATCCAAGTAATAATCTCACTATCTATTCTTCTGTCCATTTATCTGTTTTGTTTTACAATTAATGAGCGACTAGTCATAGATTCCAAGTAACTTTCTCGGGAATAAGAAACACTACAGTGAACAAAACCTCCCATTGTTCATTCAATTTATGGTAGAAATGGAGAAAGTCAGATGAATTAAGCAAAAATACAAAAGAGCTGAACTATTATTTAAAAACAACACACAGAGGGATAAATGGACAAAATTTAAGCTACCTAGAGGTCTTGGAATGTGTATTGTCCTTAT--AAAAAAAAATTAC---CAGTGccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaacttagctgggcgtggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaatcaaggagggagagattgcagtgagccgagatcttgccactgcactccatcctgggtgacagagggagactctgttaaaaaaaagaaaaagaaaaagaaaa---aa-----aaGAGCAGTGAGTACTACGGGCAAACATCACTTAACCCAGTTTGTCATGAAAAGAAA--------AATGTTTGTGAGGATGTGACAGGTTAGGTAAAAACTGAACAAAGAGCAAGAGGAGGATCTAGAAAGGTAATATTACCCAACATAGGAGCAGTTGATTGGGGTATTTTGATGCCAAAAAATGCGGAAATGTTCCTGATGTGTCCAAAATGTATTTGAGAAAGAGGAAATGAAAAAAGTGGTATAGAGCTGTATTTCCAGGTGTGCAAACAGACGTATGGACATCGACGTGTGCAATAAATTGTTCACTGAAAATCAATACATAAATAAAGTGAGAAATAAAAACACTTATCTGCAATACAGCCATGAGTCTCAGAGCACGGCATGTGGAGAAATGTACATACACGAGGTATCTCTGAGAGGAAACAGAATAAAGAGGTACTTGACTGCCTCTGGAGATGGAAATGGAGAAGATGGGAACAAGGATCACCTGTGTGCCCGTTGGTAAATATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e panTro4.chr19 59277202 0 + 63644993 C a score=14982.000000 s hg38.chr19_GL949753v2_alt 325967 15 + 796479 TGTT------TGTGTGTGTGT s ponAbe2.chr19 56135566 21 + 60714840 TATTTGTGTGTGTGTGTGTGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161524 15 + 64156825 ------TTTGTGTGTGTGTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260608 15 + 59248254 ------TTTGTGTGTGTGTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47351903 15 + 51301725 ------tttgtgtgtgtgtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47060743 15 + 50890351 ------TTTGTGTGTGTGTGT i chlSab2.chr6 C 0 I 340 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e panTro4.chr19 59277202 0 + 63644993 C a score=-311.000000 s hg38.chr19_GL949753v2_alt 325982 1 + 796479 T s ponAbe2.chr19 56135587 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161539 1 + 64156825 G i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55260623 1 + 59248254 G i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47351918 1 + 51301725 t i papAnu2.chr19 C 0 I 396 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e chlSab2.chr6 47060758 340 + 50890351 I e panTro4.chr19 59277202 0 + 63644993 C a score=6660.000000 s hg38.chr19_GL949753v2_alt 325983 12 + 796479 TCTTTTTTTTGA s ponAbe2.chr19 56135588 12 + 60714840 TCTTTTTTTTGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161542 12 + 64156825 TCTTTTTTTTGA i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55260626 12 + 59248254 TCTTTTTTTTGA i macFas5.chr19 I 2 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898068 38 - 106955855 T e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=32143.000000 s hg38.chr19_GL949753v2_alt 325995 36 + 796479 GGGAACAAGGATCACCTGTGTGCCCACTGGTAAATA s ponAbe2.chr19 56135600 36 + 60714840 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898030 36 - 106955855 GGGAACAAGGATCACCTCTATGCCCACTGGTAAATA i nomLeu3.chr10 T 38 I 2 s rheMac3.chr19 60161554 36 + 64156825 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260638 36 + 59248254 GGGAACAAGGATCACCTGTGTGCCCATTGGTAAATA i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=-1112.000000 s hg38.chr19_GL949753v2_alt 326031 2 + 796479 -TA s ponAbe2.chr19 56135636 2 + 60714840 -TA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60161590 2 + 64156825 TT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55260674 2 + 59248254 TT- i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898066 2 - 106955855 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=7715.000000 s hg38.chr19_GL949753v2_alt 326033 10 + 796479 tttgtgtgtg s ponAbe2.chr19 56135638 10 + 60714840 TTTATGTGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898068 10 - 106955855 TTTGTGTGTG i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60161592 10 + 64156825 tgtgtgtgtg i rheMac3.chr19 C 0 I 652 s macFas5.chr19 55260676 10 + 59248254 tgtgtgtgtg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e panTro4.chr19 59277202 0 + 63644993 C a score=90487.000000 s hg38.chr19_GL949753v2_alt 326043 255 + 796479 agttttttgttttgttttgtttttgttgttgttgttgtttgtttgt---ttttttagatgaagtctgactcttattgcccaggctggagtgcagtggtgtagcgcgatcttggctcactgcaacctct------gcctcccaggttcaagtgcttctcctgcctca-cctcccgagtagctgggattacaggtgcccgccaccacgcccagctaa------ttttttgtatttttagtagagacggggtttcactatgttggccaggctgg s ponAbe2.chr19 56135648 227 + 60714840 GGtttt--------ttttgtttttg------------------------ttttttagatgaagtctgactcttgttgcccaggctggagtgcagtggggt-----gatctcggctcattgcaacctctgcctccgcctcccaggttcgagtgcttctcctgcctca-cctcccgagtagctgggattacaggcgcccgccaccgtgcccggctaa------ttttttatatttttagtagagacggggtttcactatgttggccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898078 247 - 106955855 GGGTTT--------ttttgttttttttgttgttgtt-ttgttttgt---ttttttagatgaagtctgactcttgttgcccaggctggagtgcagtggagt-----gatcttggctcattgcaacctctgcctccacctcccaggttcaagtgcttctcctgcctca-cctcctgagtagctgggattacaggcgcccgccactacgcccggctaa------ttttttgtatttttagtagagacggggtttcactatgttggccaggctgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55260686 251 + 59248254 ---------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttagatgaagtctgactcttgtttcccaggctggcgtgcagtggcac-----catctcagctcactgcaaactccgcctccacctcccaggttcaagtgcttctcctgcctcagcctcctgagtagctgggattacaggcgcatgccaccacatctggctaactttttttttttttttttttttttgagacggagtctctctctgtcacccaggctgg i macFas5.chr19 C 0 I 38 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1965.000000 s hg38.chr19_GL949753v2_alt 326298 7 + 796479 tctcaaa s ponAbe2.chr19 56135875 7 + 60714840 tctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898325 7 - 106955855 tctcaaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55260937 38 + 59248254 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=78064.000000 s hg38.chr19_GL949753v2_alt 326305 230 + 796479 ctcctgacctcaggtgatccaccctctttggcttcccaaagtgctgggattacaggcatgagtgagcccgcacccggcctgtatttttttgtttGtttgtttgttttcagtagagatggggtttcaccatgttatccaggctggtcttgaactcctgacctcaggtgatctgcccacctcggcctcccaaagtgctgggattacaggggtgagcca--ccccgcccggcTGT- s ponAbe2.chr19 56135882 220 + 60714840 ctcctgacctcaggtgatccaccctctttggcctcccaaagtgctgggattacaggcatgagtgagcctgcacccagccCATATATT--------ttttttttttttcagtagagatggggtttcaccatgttagccaggctggtcttgaactcctgacctcaggtgattcgcccacctcggcctgcaaaagtgctgggattacaggcgtgagcca----ccgcacAAATAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898332 224 - 106955855 ctcccgacctcaggtgatccaccctctttggcctcccaaagtgctgggattacaggcatgagtgagcccccgcccagccCGTATTTTTT------ttttttttttttcagtagagatggggtttcaccatgttagccaggctggtcttgaactcctgacctcaggtgatccgcccaccttggcctcccaaagtgctgggattacaggcgtgagcca--ccgcgcctggcTAT- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55260975 217 + 59248254 ctcccgggttcccgccattctcctgcctcagcctctggagcagctgggactacaggcgc-------ccgccacctcgcccggctaatt-------tctttgcatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctt--gtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagtgagcctgcgcctagcccgt i macFas5.chr19 I 38 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=73953.000000 s hg38.chr19_GL949753v2_alt 326535 329 + 796479 ATCTGTGTTTTTATATTGCATGAATGAACATGaagaggataaatcggctttactgggggaaatgaatttcaggagaacgtgaggaagcaacagatggagatcactggtgggcgaattgatctggtgagaaatgacaggtgcttggatcaggttgatgcagga---agtggaggtcatgagggttttgagatatgtgtgtgattagagtcatcagaacttgaagaacctctagattcgattttcaaagtgaaagaTCTGCGAATGGACTCATC-----ttttttttttttttcaagatggactcttgctctgttgcccaggctggagtgccacggcgc s ponAbe2.chr19 56136102 323 + 60714840 ATTTGTGTTTTTATATTGCATTAATGAACATGaagaggataaattggctttactgggggaaatgaatttcaggagaacatgaggaagcaacagatggaggtcatgggtaggagaactgatctggtgagaaatgacaggtgcttggatcaggttgatgcaggaagcagtggaggtcatgggggttttgagatatgtgtgtgattagagtcatcagaacttgaagaacctctagattcgatttttaaagtgaaagaTCTGTGAATGGACTCACCttttttttttttttttttttgagatggactctcgctctgt--------------tgccacggcgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102898556 326 - 106955855 ATTTGTGTTTTTATATTGCATTAATGAACATGaagaggataaattggctttactgggggaaatgaatttcaggagaacgtgaggaagcaacagatggagatcattggtaggagaattgatctggtgacaaatgacaggtgcttggatcaggttgatgcaggaagaagtggaggtcatgggggttttgagatatgtgtgtgattagagtcattagaacttgAAGCCCCTCTATATTTGATTTTCAAAGTAAAAGATCTGCAAATGGACCCAAC-----tttttttttt------agacggagtctcgttctgacacctaggccggaatgcaatgccgc i nomLeu3.chr10 C 0 M 409 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55261192 0 + 59248254 C e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=8399.000000 s hg38.chr19_GL949753v2_alt 326864 104 + 796479 gatgtcggctcactgcgaactccgcctccctggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccggctaa s ponAbe2.chr19 56136425 102 + 60714840 gatgtcggctcactgcgaactccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggcctacaggtgcccgcaa--acgcctggctaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e macFas5.chr19 55261192 0 + 59248254 C e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=1580.000000 s hg38.chr19_GL949753v2_alt 326968 17 + 796479 a---tttttgtatttttagt s ponAbe2.chr19 56136527 20 + 60714840 attttttttggatttttggt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261192 20 + 59248254 attttttttttttttccagg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e chlSab2.chr6 47060758 340 + 50890351 I e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=8827.000000 s hg38.chr19_GL949753v2_alt 326985 18 + 796479 agagacggggtttcaccg s ponAbe2.chr19 56136547 18 + 60714840 agagacggggattcacca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261212 18 + 59248254 agagatggggtttcacca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061098 18 + 50890351 agagatggggtttcacca i chlSab2.chr6 I 340 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I e panTro4.chr19 59277202 0 + 63644993 C a score=38762.000000 s hg38.chr19_GL949753v2_alt 327003 52 + 796479 tgttagccaggatggtctcgatctcctgacctc--gtgatccgcccgcctcggc s panTro4.chr19 59277202 52 + 63644993 tgttagccaggatggtctcgatctcctgacctc--gtgatccgcccacctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136565 52 + 60714840 tgttagccaggatggtctcgatctcctgacctc--gtgatccacccgcctcagc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261230 54 + 59248254 tgttggccaggctggtcttgaactcgtgacctcaggtgatccacccatcttggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061116 54 + 50890351 tgttggccaggcttgtcttgaactcctgacctcaggtgatccgcccacctcggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I e rheMac3.chr19 60161602 652 + 64156825 I a score=158688.000000 s hg38.chr19_GL949753v2_alt 327055 130 + 796479 ctcccaaagtgctgggattacaggcgtgagccaccgtacctgaccCCAAC-TTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTCTTCAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG s panTro4.chr19 59277254 130 + 63644993 ctcccaaagtgctgggattacaggcgtgagccaccatacctgaccCCAAC-TTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTCTTCAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136617 131 + 60714840 ctcccaaagtgctgggattacaggcgtgagccaccgtgcctgaccCCAACTTTTTTTTTTTAATCAAGTGAGTGAGAAGAGGATTCATCTTTTTTTCAAGCCTCAGAAGTCCAAGTGATGATTCTGGTTAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162254 130 + 64156825 ctcccaaagtgctgggattacaggcatgagccaccgcgcccggccCCAAC-TTTTTTTTTAAATCAAGTGAGTGACAAGAAGATTCATCTTTTCCACAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i rheMac3.chr19 I 652 C 0 s macFas5.chr19 55261284 130 + 59248254 ctcccaaagtgctgggattacaggcttgagccaccgcgcccggccCCAAC-TTTTTTTTTAAATCAAGTGAGTGACAAGAAGATTCATCTTTTCCACAAGCCTCAGAAGTCCAGGTGATGATTCTGGTTAG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47061170 129 + 50890351 ctcccagagggctgggattacaggcatgagccactgcgccgagccCCAAC-TTTTTTTTT-AATCAAGTGAGTGAGAAGAAGATTCATCTTTTCTGCAAGCCTCAGAAATACGGGTGATGATTCTGGCTAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e papAnu2.chr19 47351919 396 + 51301725 I a score=81895.000000 s hg38.chr19_GL949753v2_alt 327185 70 + 796479 AAAGAGCTGTCCGTggtcgggtgcggtggctcacgcctgtaatcccagcacttggggaggccgaggcagg s panTro4.chr19 59277384 63 + 63644993 AA-------TCCGTggtcgggtgtggtggctcatgcctgtaatctcagcacttggggaggccgaggcagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136748 21 + 60714840 AAAGAGCTGTCCATGGTTggg------------------------------------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162384 70 + 64156825 AAAGAGCTGTCCGTggtcgggcgcggtgcctcacgcctgtaatcccagcacttcgggaggccgaggcagg i rheMac3.chr19 C 0 I 231 s macFas5.chr19 55261414 70 + 59248254 AAAGAGCTGTCCGTggtcgggcgcggtgcctcacgcctgtaatcccagcacttcgggaggccgaggcagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352315 70 + 51301725 aaaGAGCTATCcgtggttgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcagg i papAnu2.chr19 I 396 C 0 s chlSab2.chr6 47061299 70 + 50890351 AAAGAGCTGTCTGTggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M a score=256040.000000 s hg38.chr19_GL949753v2_alt 327255 245 + 796479 tggatcat--gaggtcaggagttcaagaccagcctggccaagaaggtgaaaccccgtctctcctaaaaatatgaaaagtagccaggcgtggtggcgggcacctgtaatcccagcttctggggaggctgaggga-gataattgcttgagctcaggaagcggagtttgcagtgagccgagatcgcgccactgcattccaacctgggtgacagagcgagactctgtctcaaaaaaaaaaaaa----gaaagaaag s panTro4.chr19 59277447 249 + 63644993 tggatcat--gaggtcaggagttcaagaccagcctggccaagaaggtgaaaccccgtctctcctaaaaatatgaaaagtagccaggcgtggtggcgggcacctgtaatcccagctactcgggaggctgaggga-gataattgcttgaactcaggaagcggagtttgcagtgagccgagatcgcgccactgcactccaacctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaaagaaagaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136769 208 + 60714840 ----tcac--aaggtcaggagttcaagaccagcctagccaagaaggtgaaaccccatctctcctaaaaatatgaaaagtagccaggtgtggtggcgggcacctgtaatcccagctactcgggaggctgaggga-gataa------------------------ttgcagtgagccgagattgtgccactgcactccaacctggatgacagagtgagactccgtctcaaaaaaaaaaaaa------------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55261484 236 + 59248254 tggatcac--gaggtcagaagttcaagaccagcctagcaaagatggtgaaaccccatctctactaaaaatatgaaaagtagccaggcatggtggcg-gcgcctgtcgtcccagctactcgggaggctgaggcaggagaattgcttgaactcgggaggcggagcttgcaatgagccgagatctcgccactgcactccagcctgagtgacagagcgagactccatctcaaaaaaaaacaaa------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352385 248 + 51301725 tggatcacctgaggtcagaagttcaagaccagcctggccaagatggtgaaaccccgtctttactaaaaatatgaaaagtagctgggcatggtggcgtgcacctgtagtcccagctactcaggaggctcaggcaggagaattgcctgaactcgggaggtggaggttgcagtgagccgagatcgtgtcatggcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaa----aaaaaaaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061369 239 + 50890351 tggatcacctgaggtcagaagttcaagaccagcctggccaagatggtgaaaccccgtctctactaaaaatattaaaagtagctgggcatggtggcgtgcacctgtcgtcccagctactcaggaggctcaggtaggagaattgcttgaactcgggaggcggaggttgcagtgagctgagatcgtgccatggcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaa------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M e rheMac3.chr19 60162454 231 + 64156825 I a score=461036.000000 s hg38.chr19_GL949753v2_alt 327500 293 + 796479 aaaaaaaaAAAGAAAGAAAGAGCTGTCCGGAGTTAAATTCAGACCAG-Aggctgggcgcggtgtctcgtgcctgtaatcccagcaacttgggaggccgaggcgggcggatcacaaggtcaggggatcgagaccatcctggctaacacagggaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggctggtgcctgtagtcccagctactcg-------ggaggctgaggtaggagaatggcatgaacccaggaggcagagcttgcagtgagccgagatcgcgccactg s panTro4.chr19 59277696 293 + 63644993 aaaaaaagaaagaaagaaagaGCTGTCCGGAGTTAAATTCAGACCGG-Aggctgggcgcggtgtctcacgcctgtaatcccagcaacttgggaggctgaggcaggcggatcacaaggtcaggggatcgagaccatcctggctaacacagggaaaccctgtctctactaaaaatacaaaaaattagccgggcgtggtggctggtgcctgtagtcccagctactca-------gaaggctgaggcaggagaatggcgtgaacctgggaggcagagcttgcagtgagccgagatcgcgccactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56136977 283 + 60714840 ----------agaaagaaaGAGCTGTCCGGAGTTAAATTCAAACCAA-Aagctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggctaacacggggaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggctggtgcctgtagtcccagctactcg-------ggaggctgaggcaggagaatggcatgaacccaggaggcagagcttgcaatgagccgagatcgcaccactg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60162685 296 + 64156825 aaaaaaacaaaaaaacaaaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggctgggcccagtggctcacgcctgtaatgccagcactttgggaggccaaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacccggcgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggcactcaggaggctgaggcaggagaatgg-gtgaacccgggaggcggagcttgcagtgagccgggatcgcaccactg i rheMac3.chr19 I 231 C 0 s macFas5.chr19 55261720 293 + 59248254 ---aaaacaaaaaaacaaaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggctgggcccagtggctcacgcctgtaatgccagcactttgggaggccaaggcgggcggatcacgaggtcaggagatagagaccatcctggctaacccggtgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggctgaggcaggagaatgg-gtgaacccgggaggcggagcttgcagtgagccgggatcgcaccactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352633 276 + 51301725 --------------------agctgtctGGAGTTAAATTCAGAccagcaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcaggtggtcaggagatcgagaccatcctggctaacacggtgaagccccatctttactaaaaatacaaaaaattagccgggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggctgaggcaggagcatgt-gtgaacccaggaggcggagcttgcagtgagccgggatcgcaccactg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061608 280 + 50890351 ----------------aaaGAGCTGTCTGGAGTTAAATTCAGACCAGCAggccaggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcaggtggtcaggagatcgagaccatcctggctaacacggtgaagccccatctttactaaaaatacaaaacattagccaggcgtggtggc----gcctgtagtctcagctactcggaactcgggaggccgaggcaggagcatgg-gtgaacccaggaggcggagcttgcagtgagccgggatcgcaccactg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I e nomLeu3.chr10 102898882 409 - 106955855 M a score=378475.000000 s hg38.chr19_GL949753v2_alt 327793 215 + 796479 --cactccagcctgggcgacagagcaagaccccgtctcaaaaacaaacaaacaaaaaaaaaaaaacccaaaaaaacacacaaaaacaaaTCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCGTACTCATCACAATTGGAGTCAAC-TTTCACGCAGACCTCAAGGTGTCCAAGTACTTTCCATATAAGTGTTGCTGC s panTro4.chr19 59277989 213 + 63644993 --cactccagcctgggcgacagagcaagaccccgtctcaaaaacaaacaaacaaacaaacaaaaac--aaaaaaacacacaaaaacaaaTCCAGACCAAAAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCGTACTCATCACAATTGGAGTCAAC-TTTCACGCAGACCTCAAGGTGTCCAAGTACTTTCCATATAAGTGTTGCTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56137260 195 + 60714840 --cactccagcctgggcgacagagcgagactccgtctcaaaaacaaacaaac--------------------aaacacacaaaaacaaATCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCATACTCATCACAATTGGAGTCAAC-TTACATGCAGACCTCAAGATGTCCAAGTACTTTCCATATAAGTGTTCCTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102899292 208 - 106955855 --cattccagcctgggtgacagagtgagactccatctcaaaaacaaacaaacaaacaaaca-------aaaaaacCCCACAAAAACAAATCCAGACCAGCAGTGATTTTCCCTAAAATGAGAATCCTGAGATAGGAGCTTCCACACTCACCACAATTGGAGTCAAC-TTACACACAGACCTCAAGGTGTCCAAGTACTTTCCGTATGAGTGTTGCTGa i nomLeu3.chr10 M 409 C 0 s rheMac3.chr19 60162981 180 + 64156825 tactgtccagcctgggcgac-gagcgagactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCAACTTTACACACAGACCCCAAGGTGTCCAAGTACTTTCCATATGAGTGTTGCTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55262013 180 + 59248254 tactgtccagcctgggcgac-gagcgagactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCAACTTTACACACAGACCCCAAGGTGTCCAAGTACTTTCTATATAAGTGTTGCTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47352909 180 + 51301725 cactgtccagcctgggcgat-gagcaagactccgtctcaaaaa-------------------------------------agaaaaaattccagacCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCATAACTGGAGTCAACTTTACACACAGTCCCCAAGGTGTCCAAGTACTTTCCATATGAGTGTTGctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47061888 173 + 50890351 cactgtccagcctgggcgac-gagcaaaactccgtctcaaaaa-------------------------------------agaaaaaaTTCCAGACCAGCAGTGATTTTCCCTAAAACGAGAATCCTGAGATAGGAGCTTCCATACTCACCACAACTGGAGTCA-------ACACAGACCCCAAGGTGTCTAAGTACTTTCCATATGAGTGTTGCTGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45567203 298 + 49145316 I a score=1716490.000000 s hg38.chr19_GL949753v2_alt 328008 612 + 796479 t---------------------------aaaa--------ataaaataa-------------taataataCAAACTCCAGGCCTCTTGGATTCTAAAAATGGGAGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATGCTTGAGTTGTCTACAGCAGCTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATGCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGG-----------------GAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCGGGTCCTGTAGTTGCCCCTACCAGGGTGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCGCTTTCTTGCTTTTGTTCCTTCCTCCACACAATGGCCACAGTTACTGGTGGAG-ACAAA--ATGTCTGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCGGGCATTTCCTCGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAGAATAggccgggtgcggtgtctcacgcctggaatcccagcactttgggaggccgaggcaggcacatcctctgaggtcaggagttcaagaccagcctggtcaacatg s panTro4.chr19 59278202 621 + 63644993 T---------------------------Aaaa--------ataaaataa-aata--aaataataataaTACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGAGT-GTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATGCTTGAGTTGTCTACAGCAGCTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGG-----------------GAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCGGGTCCTGCAGTTGCCCCTACCAGGGCGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCGCTTTCTTGCTTTTGTTCCTTCCTCAACACAATGGCCATGGTTACTGGTGGAG-ACAAA--ATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCGGGCATTTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAGAATAggccgggtgcggtggctcacgcctggaatcccagcactttgggaggccgaggcaggtacatcatctgaggtcaggagttcaagaccagcctggccaacatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56137455 630 + 60714840 TA--------------------------AAAA--------ATAAAATAA-------------CAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAACGGGAGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCATTCTTGAGTTGTCTACAGCAGGTTCCATGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTCAAAAAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGGTCCTGCAGTTGCCCCTACCAGGGCGAGAACCTGGTGCTCATAGAAACCTGCTCAGAAAATCTCTTTCTTGCTTTTGTTCTTTCCTCAACACAATGGCCACGGTTACTGGTGGAG-ACAAA--ATATACGGAGTGGACT-GAGTCC-AAGAAAAGGTACATCGGGCA-TTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAAATTTTGAAAACAAGAATAggccgggtgcggtggctcatgcctggaatcccagcactttgggaggccgaggcaggcacatcatctgaggtcaggagttcaagaccagcctggccaacatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102899500 642 - 106955855 ta--------------------------aaaa--------ataaagtaa-aata--aaataataataatacaaaCTCCAGGCCTCTTGGATTCTAAAAACGGGGGTTGTGTATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCGTTCTTGAGTTGTCTACAGCAGTTTCCATGAGTTCCCAGTGTGGTTGAAATCATGAATACTCCTTCCCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACGTGGTGGTTCAGCTGGGGAGCTATATTTCCGTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGATGTCATACCCAGGGGAGATTAACTTTCAGGTCCTGCAGTTGCCCCTCCCAGGGAGACGACCTGGTGCTCATAGAAACCTGCTCAGAAAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACATAATGGCCACGGTTACTGGTGGAGAACAAA-TATGTCCAGAGTGGACTGTAGTCC-AAGAAAAGGTACATCGGGCATTTCCTTGCCTAGGAAGTCACTGGCACAGAAGTTCAGAAATGAGCGAGATTTTGAAAACAAAAATAggccgggtgcggtggctcatgcctggaatcccagcactttgggaggccgaggcaggcacatcatctgaggtcaggagttcgagaacagcctggccaacatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60163161 676 + 64156825 TAAAAAAATACAATACAATGTTGCTGCTAAAAAAAATACAATACaataataataataataaataataataCAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTATCTCTTTTTTCTCCAGATTTAGCCTGGCCTGTCTTTCTCGAGTTGGCTGCAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAGACCCACGTGGTGGTTCATCTGGGGATCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGAGTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGGCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACACAACGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAACGggcccggcgcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaatatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55262193 650 + 59248254 TA--------------------------AAAAAAAATACAATACAATAATAATAATAAATAATAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTATCTCTTTTTTCTCCAGATTTAGCCTGGCCTGTCTTTCTCGAGTTGGCTGCAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAGACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACACTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGGCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATCTCTTTCTTGCTTTTGTTCCTTCCTCAACACAACGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTGGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAACGggcccggcgcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaatatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353089 640 + 51301725 ta--------------------------aaaa-------aatacaataataataataataataaataatacaaactCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGTAtctcttttttctccaaatttaGCCTGGCCTCTCTTTCTCAAGTTGGCTACAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAAATCATAAATattccttctctttcatttccctttttc--acaT-CCCCAAACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCCTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATC----TCTTGCTTTTGTTCCTTCCTCAACACAATGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTAGAGTCCaaaaaaaaGGTACATCTGGCATTTCCTTGCCTAGGAAGTCGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAATGGGCCCggagcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcgagaccagcctggccaatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062061 642 + 50890351 TA--------------------------AAAA--AATACAATACAATAATAATAATAATACTAAATAATACAAACTCCAGGCCTCTTGGATTCTAAAAATGGGACTTGTGAATCTCTTTTTTCTCCAAATTTAGCCTGGCCTCTCTTTCTCGAGTTGGCTACAGCAGGTTCCTTGAGTTCCCAGTGTGGTTGAA---ATAAATATTCCTTCTCTTTCATTTCCCTTTTTC--ACATCCCCCAAACCCACGTGGTGGTTCATCTGGGGAGCCGTATTTCCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTA--ACAGTGGGTGTCATACCCAGGGGAGATTAACTTTCAGTTCCTGCAGTTGCCCTTACC-GGCCGACAATCTGGTGCTCATAGAAACCTGCTCAGAGAATC----TCTTGCTTTTGTTCCTTCCTCAACACAAGGGCCACGGTTACCGGTGGAG-ACAAAATATGTCCGGAGTGGACTAGAGTCC-AAGAAAAGGTACATCTGGCATTTCCTTGCCTAGGAAGTTGCTGGCACAGAAGTTCAGAAATGAGTGAGCTTTTGAAAACAAGAATGggcccggagcaatggctcacgcctggaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcgagatcagcctggccaatatg i chlSab2.chr6 C 0 I 239 s calJac3.chr22 45567501 594 + 49145316 ---------------------------taaaa--------acaaaTTAATAA----------TAATAATACAAACTGCAGGCCTCTTGGATTCT-AAAATGGGAGTCATGTATCTCTTT-----------------------------CTTGAGTTGGCTACAGCAGGTTCCATGAGTTCCCAGTGTGGTCGAAATCATAAATATTCTGTCTCTTTCATTTCCCTTTTTC--ACAT-CCCCAAACCCACATGTTGGTTCACCTGGGAAGC--TATTTTCTTGGGGAGGAAAGTGAGATTTTGAGGAAAGTAGCACAGTGGGTGTCATATGCAGGGGAGAGTCACTTTCAAGTCCTGTGGTTGC--------AGGTGACAGCCTGGTGCTCATAGGAATCTGCTCAGAAAATCTCTATCTTGTTTCTGTTCCTTCCTCAACACAATGGCCATGGTTACCGGTGGAG-ACAAAATACGTCCAGAGTGGACTGGAGTCC-AAGAAAAGATGTATCTGGCATCGCCTTTCCTAGAAAGTCACTGGGACAGAAGTTCAGAAATGAATGAGCTTTTGAAAACAAGAATGggccaggcgtggtggctcatgcctgtaatcccagcacttcgggaggctgaggtgggcagatcacctaaggttaggagttcgagaccagcctggccaacatg i calJac3.chr22 I 298 C 0 e canFam3.chr1 19746457 10348 - 122678785 I a score=1883.000000 s hg38.chr19_GL949753v2_alt 328620 1 + 796479 g s panTro4.chr19 59278823 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138085 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900142 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60163837 1 + 64156825 g i rheMac3.chr19 C 0 I 241 s macFas5.chr19 55262843 1 + 59248254 g i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47353729 1 + 51301725 g i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45568095 1 + 49145316 g i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I a score=10700.000000 s hg38.chr19_GL949753v2_alt 328621 27 + 796479 gaaaaccctgtctctaccaaaaat---aaa s panTro4.chr19 59278824 28 + 63644993 ggaaaccctgtctctaccaaaaatt--aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138086 26 + 60714840 ggaaaccccgtctctaccaaaaat----aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900143 26 - 106955855 ggaaaccccgtctctaccaaaaat----aa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55262845 14 + 59248254 ----------------caaaATATTTCAAA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47353731 14 + 51301725 ----------------caaaatatttcaaa i papAnu2.chr19 I 1 N 0 s calJac3.chr22 45568096 25 + 49145316 ggaaactctgtctctactaaaact----a- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=21729.000000 s hg38.chr19_GL949753v2_alt 328648 28 + 796479 aaaaaattagccgggcgtgatggtgcag s panTro4.chr19 59278852 28 + 63644993 aaaaaattagccaggtgtgatggtgcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138112 28 + 60714840 aaaaaattaggcgggcgtggtggtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900169 28 - 106955855 aaaaaatcagctgggcgtgatggtgcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55262859 19 + 59248254 AAAAAATT---------TGAAAGTGCAG i macFas5.chr19 C 0 N 0 s calJac3.chr22 45568121 28 + 49145316 aaaaaattggttgggcttggtggtgggt i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=89962.000000 s hg38.chr19_GL949753v2_alt 328676 114 + 796479 ggctgtaatcccagctactctagaggctgagatggcag-atctcttgaaccctggaggtggaggctgcagtgagccgagatcgcgccactgcactccagcctggtagacagagca s panTro4.chr19 59278880 114 + 63644993 ggctgtaatcccagctactctagaggctgagacggcag-atctcttgaaccctggaggtggaggctgcagtgagccgagatcgcgccactgcactccagcctggtagacagagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56138140 114 + 60714840 ggctgtaatcccagctactctggaggctgagacagcag-atctcttgaaccctggaggtggaggctgcagtgagccgagattgtgccactgcactccagcctaggtgacagagca i ponAbe2.chr19 C 0 I 14661 s nomLeu3.chr10 102900197 114 - 106955855 ggctgtaatcccagctactctggaggctgagacagcag-atctcttgaactctggaggtggaggctgcagtgagccgagattgtgccattgcactccagcctaggtgacagagca i nomLeu3.chr10 C 0 I 408 s calJac3.chr22 45568149 115 + 49145316 gcctgtaatcccagctaattgggaggctgaggcaggagaattgcttgaacccaggaggtggaggcttcagtgagtcgagattgcaccactgcataccagcctgggcgacagagca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=8169.000000 s hg38.chr19_GL949753v2_alt 328790 18 + 796479 agactccgtctcaaataa s panTro4.chr19 59278994 18 + 63644993 agactccatctcaaataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152915 17 + 60714840 agactccatctcaaa-aa i ponAbe2.chr19 I 14661 C 0 s nomLeu3.chr10 102900719 15 - 106955855 agactctgtctcaaa--- i nomLeu3.chr10 I 408 C 0 s calJac3.chr22 45568264 16 + 49145316 agact--gtctcaaaaaa i calJac3.chr22 C 0 I 2958 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=13707.000000 s hg38.chr19_GL949753v2_alt 328808 43 + 796479 ataaataaataaataaataaaaaattaaaacat--aaaaaaataa s panTro4.chr19 59279012 39 + 63644993 ataaataaataattaaa----aaaTTAAAACAT--AAAAAAATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152932 45 + 60714840 ataaataaataaataatttaaaaaTTAAAACattaaaaaaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900734 36 - 106955855 ----aaaaataattaaa----aaattaaaacatt-aaaaaaaTAA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e calJac3.chr22 45568280 2958 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=36082.000000 s hg38.chr19_GL949753v2_alt 328851 33 + 796479 aAATTTTCTCGGGGAGCTGACTATGAGAAGGCA s panTro4.chr19 59279051 33 + 63644993 AAATTTTCTCGGGGAGCTGACTATGAGAAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56152977 29 + 60714840 aaattttCTCGGGGAG----CTATGAGAAGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900770 33 - 106955855 AAATTTTCTCAGGGAGGTGACTATGAGAAGGCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453514 33 + 59248254 AAATTGTCTCAAGGAGCTGACAGTGAGAAGACA i macFas5.chr19 N 0 I 301 s calJac3.chr22 45571238 33 + 49145316 AAATTTTCTCAGGGAGCTGACTGTGAGAAGGCA i calJac3.chr22 I 2958 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=1000.000000 s hg38.chr19_GL949753v2_alt 328884 1 + 796479 G s panTro4.chr19 59279084 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153006 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900803 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45571271 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e macFas5.chr19 55453547 301 + 59248254 I e rheMac3.chr19 60163838 241 + 64156825 I a score=88373.000000 s hg38.chr19_GL949753v2_alt 328885 87 + 796479 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGTGGTGGGTGGGAAAAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT s panTro4.chr19 59279085 87 + 63644993 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGTGGTGGGTGGGAAAAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153007 87 + 60714840 AAATATGTTAATATCTCCAGGTGTCTGTCTGGGGTGGGGTGGGTGGGAAGAAGGCGGAAGTGGTTTCCTGTAATGAATTTGCTCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900804 87 - 106955855 AAATATGTTAATATCTCAAGGCGTCTGTCTGGGCTGTGGTGGGTGGGAAGAAGGCGGAAGTGGTTTCTTGTGATGAATTTGCTCTGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453848 66 + 59248254 AAATGTGTCACTATCTCAGGGTGTATGT----------GTGTCTGGGGAGG----GACAGTGGTTTTCTGTGCTGAGTTT------- i macFas5.chr19 I 301 C 0 s papAnu2.chr19 47538016 73 + 51301725 aaatGTGTTACTATCTCAGGGTTTGTGA----------GTGTCTGGGGAGG----GGCAGTGGTTTTCTGTGCTGAGTTTGCTCTGA i papAnu2.chr19 N 0 C 0 s calJac3.chr22 45571272 80 + 49145316 ACATATGTTACTATCTTAA-GTGTCTTTCTGAGGCGTGGTG---GGGAAGGG---GTAAGTGGTTTCCTGTAATGAATTTGCTCTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19746457 10348 - 122678785 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=788579.000000 s hg38.chr19_GL949753v2_alt 328972 570 + 796479 AGGAAGGAGCCATGTTTTTTGGCGCTGGGGATGTTAACTTAGTCCTGGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGATTCAGACCCGGAGAAGGATTTTGATCAG------GGAAGAGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGAGTGAGGGTTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGCAACTAGGGTCTGTTTCACTCTCTGCCTTAGTTTACTGGAGGAACGAATGGTGTCATCCCAGGATGAATGATCCC-GGGGAAGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-CGGAGTGCAG-AGGAAGCACTA-TCTCCCTCCTGGCCCTGCTGTCTAG-TTTTGTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAATTCTATA s panTro4.chr19 59279172 570 + 63644993 AGGAAGGAACCATGTGTTTTGGCGCTGGAGATGTTAACTTAGTCCTGGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGATTCAGACCCGGAGAAGGATTTTGATCAG------GGAAGAGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGAGTGAGGGTTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACATGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGCAACTAGGGTCTGTTTCACTCTCTGCCTTAGTTTACTGGAGGAACCAATGGTGTCATCCCAGGATGAATGATCCT-GGGGAAGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-CGGAGTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTAG-TTTTCTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAATTCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153094 540 + 60714840 AGGGAGGAGCCATGTTTTTTGGTGCTGGAGGTGTTAACTTAGTCCTAGTCATCAACAACATGAACATCAGGCAGAGATACTTGTGTCTTACTTGCAGGAAGATTC------------------------------------AGTC------AGCTACAGATAAGGTT----------GGGGCTATGAGAATAATAGATGTCAGCCTGGGGTGAGGGCTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGGTGGCACAGACAGGCTGTGTTCAGTCTCCAG-TGAGCTTGCACTGTGGGAATGGACCCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTCTTCACTGTCTGTGAAACAAAAGTGAGTGAGCAACTAGGGTGTGTTTCACTCTCTGCCTTACTTTACTGGGGGAACCAATGGTGTCATCCCAGGATGAATGACCCT-GGGGAGGAACCAGGCTAGGGAGATATTTATAAGGCTGTTCA-GGGACTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTAG-TTTTGTTTCTCCCAAGCAC-TTCTTCCCTCCG-ACTTTCTTAACTCTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102900891 566 - 106955855 AGGGAGGAGCCATGTTTTTTGGCGCTGGAGATATTAACTTAGTCCTGGTCATCAACAACGTGAACGTCAGGCAGAGATACTTGTGTCTTACTTGGAGGAAGCTTCAGACCCGGAGAAGGATTTTGACCAG------GGAAGAGTC------AGCTGCAGATAAGGTT----------GGGGCTGTGAGAATAACAGGTGTCAGCCTGGGGTGAGGGCTTGGAGAAGAGGACCAG-GAGGAGGCTGATGTGATGGCACAGACAGGCTGTCTAAAGTCTCCAG-TGAGCTTGCACCGTGGGAGTGGACTCGGGGACGTGGGTGAGGAGGGCTCAAGGGTAC-AACTGCTTGGATTTGTTCACTGTATGTGAAACAAAAGTGAGTGAGTAACTAGGGTCTGTTTCACTCTCTGCCTTGGTTTACTGGAGGACCCAATGGTGTCATCCCAGGATGAATGACCCCGGGGGAGGAACCAGCCGAGGGAGATATTTATAAGGCTGTTCA-CGGACTGCAG-AGGAAGCGCTA-CCTCCCTCCTGGCCCTGCTGTCTGG-TTTTGTTT------AGCACTTTCTTCCCTCCG-ACTTTCTTATTTCTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55453914 550 + 59248254 --ACAAGAGCTGTGTTTTCTGGGGCTGGAGAGTTTAGCTCAGTCCTGGTCATCAGTAATACGAACGTCAAACAGGGAGGCTTGTGTCTTATTTGGAGGAAGATGCACACCTGTGGAAGGATTTTGATCAG-----------GGCT------GGAGACAGGTAAGTTT----------GGGGCTGTGAGAATAATAGACGTCAGTCTGGAGTG-------------GCGGGCTGG-GAGGAGGATGATGTGA---CACAGACAAGACGTCTTCGGTCTTTAGTTGAGCTTTGACTGTGGGGATGGGCCAGGGGATGTGGGTGAGGAGGGATTGGGGGAAAGAGCTGTTTGGATTTGTTCACTGTGTGTGGAGCAGAAGAGCATGAGGAACTGAGGGCTGCTCCGGTCTCTGCCTCAGTTCACTGGAGGAGCCAATGGGGCCATCACGGGATGGATGACCCCAGGAGAAGAAGCAGGCAGGGGAGATGTTTATAAGATGGACAA-CTGGCCTCAG-AGAAAGCAGAG-CCTCCCTCTGGGCCTGAGTGTGTGG-TTTCATTCCTCCCAAACAC-TTCCTCCATCTG-ACTTCCTTAGTTCTAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47538089 551 + 51301725 AGGCAAGAGCTGTGTTTTCTGGGGCTGGAGAGTTTAGCTCAGTCCTGGTCATCAGTAATATGAACGTCAAACA-GGAGACTTGTGTCTTATTTGGAGGAAGATGCAGACCTGTGGAAGGATTTTGATCAG-----------GGTC------GGAGACAGGTAAGTTT----------GGGGCTGTGAGAATAATAGATGTCAGTCTGGAGCA-------------GCAGGCTGG-GAGGAGGATGATGTGA---CACAGACAAGACGTCTTCGGTCTTTAGTTGAGCTTTGACTGTGGGGATGGGCCAGGGGATGTGGGTGAGGAGGGATTGGGGGAAAGAGCTGTTTGGATTTGTTCACTGTGTGTGGAACAGAAGAGCATGAGGAACTGAGGGCTGCTCTAGTCTCTGCCTCGGTTCACTGGAGGAGCCAATGGGGCCATCACGGGATGGATGACCCCAGGAGAAGAAGCAGGCAGGGGAGATGTTTATAAGATGGACAA-CTGGCCTCAG-AGAAAGCAGAG-CCTCCCTCTGGGCCTGAGTATGTGG-TTTCGTTCCTCCCAAACAC-TTCCTCCGTCTG-ACTTCCTTAGTTCTAGA i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45571352 564 + 49145316 AGGGAGGAGCCATGTTTTCTGGCGCTGGAGATGTTAGCTTAGTCCTGGTCATCAACATCATGAACATCAGGCAGATATACTTGTGTCTTATTTGGAGGAAGATTCAGACCCGGGGGAGGATTTTGACCAA------GGAAGAGTC------AGCCACAGATAAGGTC---------GGGGGCTGTGAGAATACAAGA--TCAGCATGGAGTGAGGTCTTGGAGTAG-GGACCAG-GAGGAGGCTGATGTGATGGTACAGACAGGCTGTCTTCAGTCTCCAG-TGAGCTTGCGCTGTGGG-ATGGACCAGCGGATGTGGGCGAGGAGGGCTGAAGGGTAC-AACTGCTTGGATGTGTTCACTGTATGTGAAGCAAAAG----CGAGTAACTAGGGTCTGTTTCATTCTCTGCCTCAGTTCACTGGAGCAGCCCATGGTGCTATCACAGGAGGAATGACCCT-GGTCAGGAACCAGGCTAGGGAGGTATTTATAAGGCTGTCAA-CGGACTGCAG-AGGAAGTGCTA-CCTCCCTCCTGGGCCTGCTGTCTGG-TTTCGCTTCTCCAAAGCAC-TTCTTCCCTCTGAAATTTCTTAtttcttta i calJac3.chr22 C 0 I 1966 s canFam3.chr1 103003210 514 + 122678785 AGAGGGGAGTTGTGTTTGCTGGGGCTAGTGGGTTTAGCTCTGGCCTGATGGTCACAGCCTTAAAGATGAGATAGTGCAACTTATATCTT-TCTGAAGGAGAGT--------GTGGGAGGGTTTTGAGCATCCCACAGGATGAGCCCAGCCTGGTGATTAGTAGGGTCTTCTAATCTAGAGGTGGTGAGAGGAATG-----CAATGGGGAGAGGGGGGCCTGCTTGGAGGAGCAGTGGGGAGGCTGATCTGCTGACGCACACAGACT-TCTTGAGTCTTGCG-------------------ATGGGTT---GGACATTTTTAAGAAGGTCTCAAGAGGCA-TGGTG------------------GTGTGTATCCAGAG-------------------------ACTCTCTGTCT--GGTGCCTGGAGGAGCCAGTGGGGCCATCCCAGGA-GGATGATCCA-GGAAAAGGCAGGGACT-GGGAGGTGATTTGAAGACAGATCATCATTTCTCAGAAGGAAGCATGACCCTTCCTCCTACCCTGGGATTGTGGATTTTCTTTGTACCCCACAC-TTCCCTTCACTG-ACTTCCTTATTTCTGTA i canFam3.chr1 n 10348 C 0 e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=16100.000000 s hg38.chr19_GL949753v2_alt 329542 11 + 796479 AGTAGCAGCAC s panTro4.chr19 59279742 11 + 63644993 AGTAGCAGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153634 11 + 60714840 AGTAGCAGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901457 11 - 106955855 AGTAGCAGCAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454464 11 + 59248254 ATTAGCAGCAC i macFas5.chr19 C 0 I 15 s papAnu2.chr19 47538640 11 + 51301725 ATTAGCAgcac i papAnu2.chr19 C 0 I 15 s canFam3.chr1 103003724 9 + 122678785 AGT--CAGCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=53021.000000 s hg38.chr19_GL949753v2_alt 329553 116 + 796479 Cagaacgcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa s panTro4.chr19 59279753 116 + 63644993 Cagaaggcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttatacgtgggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153645 116 + 60714840 Cagaaggcgatcatgtctgttgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901468 116 - 106955855 Cagaaggcgatcacgtctgctgcagagatgtgaatggagctggaggtcattatccttagtaaacaaacacaggaacagaaaaccaaataccacatgttctcacttataagtgggaa i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 103003733 26 + 122678785 --------------------------------------------CATCTTTCTCTTCA-----------------------------------------TCACTCCTAAAC----- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e papAnu2.chr19 47538651 15 + 51301725 I e macFas5.chr19 55454475 15 + 59248254 I e rheMac3.chr19 60163838 241 + 64156825 I a score=235568.000000 s hg38.chr19_GL949753v2_alt 329669 244 + 796479 ctCCATCAA-ATCTCCAAGTCATTT----------ACAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACCGTGAATTCTGTCTCCATGCTTTGGGCCAAAGCATTCACTGGAAGAAATTCCCAAGCTTTGGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTCAGCAGGTGACATCCTCCCCTGCCCCATCCATTTTCCTCGTTGTAGGAAGATGGTAATTAACCCTCCCGTCAAG-ttt s panTro4.chr19 59279869 245 + 63644993 ctCCATCAA-ATCTCCAAGTCATTT----------AAAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACCGTGAATTCTGTCTCCATGCTTTGGGCCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCGGTTTGAGGCATGAGGGTTCAcacttactgtcagttgaccttcagcaggtgacatcttcccctgccccatccattttcctcattgtaggaagatggtaatTAACCCTCCCGTCAAGtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56153761 244 + 60714840 ctCCATCAA-ATCTCCAAGTCATTT----------ACAACCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACAGTGAATTCTGACCCCATGCTTTGGGCCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCAGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTCAGCAGGTGACATCCTCCCCCGCCCCATCCATTTTCCTGGTTGTAGGAAGATGGTAATTAACCCTCCCATCAAG-ttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901584 241 - 106955855 ctGCATCAA-ATCTCCAAGTCATCT----------ACAATCTCTTCTTCCCCTGTCCATAACTCTTCATTTGATACGGTGAATTCTGTCTCCATGCTTTGGACCAAAGCACTCACTGGAAGAAATTCCCAAGCTTCAGTTTAAGGCATGAGGGTTCATACTTACTGTCAGTTGACCTTTAGCAGGTGACATCCTCCTCTGCCCCGTCCATTTTCCTTGTTGTAGGAAGACGGTAATTAACTCTCCCGTCAAG---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454490 243 + 59248254 CTCCTTTAACACCTCTGATTCATTTCTATCTCCTCACTACTTCTTCTCCCACTGCCTGGAACTCTGCATCTGATGCTGTGGATTCTGCCTCCACGCTTTTAGCGAGAGCAAACACTGGAGGAAATTCACAGGTTTCAGCGTAAGACACGGAAG-CCATA-TTACGGACAGTCGAGCTTCAGCAGGTAACATCCCTCA---------CCATTCTCCTCA-TGTAGAAAGATGATGATGATCTCTCCTTTCAAG-CCt i macFas5.chr19 I 15 C 0 s papAnu2.chr19 47538666 244 + 51301725 ctcctttaaCACCTCTGATTCATTTCTACCTCCTCACTACCTCTCGTCCCACTGCCTGGAACTCTGCATCTGATGCTGTGGATTCTGCCTCCACGCTTTTAGCGAGAGCAAACACTGGAGGAAATTCACAGGTTTCAGCGTAAGACATGGAGG-CCATA-TTACGGACAGTCGAGCTTCAGCAGGTAACATCCCTCA---------CCAGTCTCCTCATTGCAGAAAGATGATGATGATCTCTCCtttcaag-cct i papAnu2.chr19 I 15 C 0 s canFam3.chr1 103003759 229 + 122678785 --------------CTGAGTCATTTCTGCCTCCTCAGGGCTCTATCTTCCCCTGGGCAGGGCTCTCCATCCCATACTGGGAATTACTTCTCCAGGCACAGGGTAAGAGCACGAGTTAGAGGTAATTCAGAGGTTTAA--TTAAAGTTAGAGCTAAAAta-ctactgtcaat----ctttagcagatacttaccctttctgagtcttctgttcttcatagtgacgaaa-----tagtggcctctcctctcagg-att i canFam3.chr1 C 0 n 0 e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=150589.000000 s hg38.chr19_GL949753v2_alt 329913 166 + 796479 ttttgttttgttttttgttttttttttt--cctgacagcgtctcatgctgtcacccaggctggagtgcaatggcacgatctctgctcactgcaaccttgacttcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacaggcatgcaccact s panTro4.chr19 59280114 168 + 63644993 ttttgttttgttttttgttttttttttttccctgacagcgtctcatgctgtcacccaggctgcagtgcaatggcacgatctctgctcactgcaaccttgacctcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacaggcatgcaccact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154005 157 + 60714840 t----ttttgttttttgttttct-------cccgatagcgtctcatgctgtcacccaggctggagtgcaatggcaccatctctgctcactgcaaccttgacctcctgggttcaagcgattctcctgcctcagcctcctgggtagctgggattacagggatgcaccact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901825 151 - 106955855 -----ttttgttttttttttt---------tgagacggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaacctccacctcctgggttcaagccattctcctgcctcagcctcccgagtagcttggactacagg--tgc-ccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454733 161 + 59248254 t----ttttttttttttttttttttttt--ggagacagagtctcactctgt-ggccaggctggagtgcagtggtgcgatctcgactcactgtgttctccacctcccgggttcaagagattctcttgcctcagcctcccaagtagctgggactacaggcacgcaccacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47538910 156 + 51301725 t----tttttttttttttttttt--------gagacagagtcttgctctgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctcctcctctcgggtttacgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccact i papAnu2.chr19 C 0 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=1476.000000 s hg38.chr19_GL949753v2_alt 330079 2 + 796479 gc s panTro4.chr19 59280282 2 + 63644993 gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154162 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901976 2 - 106955855 gc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55454894 2 + 59248254 ac i macFas5.chr19 C 0 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2673.000000 s hg38.chr19_GL949753v2_alt 330081 8 + 796479 caagcgtg s panTro4.chr19 59280284 8 + 63644993 caagcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56154164 8 + 60714840 gAAgcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102901978 8 - 106955855 cacgcctg i nomLeu3.chr10 C 0 I 4830 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=126155.000000 s hg38.chr19_GL949753v2_alt 330089 505 + 796479 tccatgtgaagagaccagcaaacaggctttgtatgagcaataaagcttttaattcacctgggtgcaggtggactgagtctgagaaaggagtcagcgaagggagatggggaaggggttgctttataggagttgggtaggtga-ggaaaattacggtaaaaggtggtcatctattgttggcagaggaggaggtcacaaggtacctggtggggacatcataagacttattatccagaagaagaatgtcacaaagttgattgatcggttaaggtggggcagggacaagtcacagtggtggaacgtcgtaatgttggttaatcagttaaggcaggaactggctgttttacttcttttgtggtttttcggctgccccagacttcttggctccttcaggccatctgggtgtatatgtgcaggtcacagggattacaatagctgagcttcagctcagaggcctgacaaccaccacactggccaa-ttttttttttttttaatttttagtagagac s panTro4.chr19 59280292 504 + 63644993 tccatgtgaatagaccagcaaacaggctttgtatgagcaataaagcttttaattcacctgggtgcaggtggactgagtctgagaaaggagtcagcgaagggagatggggaaggggttgctttacaggagttgggtaggtgatggaaaattacggtaaaaggtggtcatctattgttagca---gagcaggtcacaaggtacatggtggggagatcataagacttattatccagaagaagaatatcacaaagttgattgatcggttaaggtggggcagggacaattcacaatggtggaatgtcgtaatgttggttaatcagttaaggcaggaactggctgttttacttcttttgtggtttttcggctgccccagacttcttggctccttcaggccatctgggtgtatatgtgcaggtcacaggggttacaatagctgagcttcagctaggaggcctgacaaccaccacactggccaatttttttttttttttaatttttagtagagac i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56154172 506 + 60714840 tccatgtgaagagaccagcaaacaggctttgtgtgagcaataaagcttttaattcacctgagtgcagacggactgagtctgagaaaggagacagcgaagggagatggggaagggattgctttataggagttgggtgggtaatggaaaatgacggtaaaaggtggtcatctattgtcagcagaggaggaggtcacgaggtacatggtggggaggtcataagacttattatccagaagaagaatgtcacaaaatcgattgatcagttaagatggggcagggacaagtcacagtggtggaatgttgtaatgttggttaatcggttaaggcaggaactggctgttttacttcttttgtggttttttggctgcccaagactccttggctccttcaggccgtgtggacgtatatgtgcaggtcacaggggttacaatggctgagctttggctcagagtcctgacaACCACCACACTAATTTT-TTTTTTTTCtttttaatttttagtagagac i ponAbe2.chr19 C 0 I 5140 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102901986 4830 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=16163.000000 s hg38.chr19_GL949753v2_alt 330594 57 + 796479 ggtttcaccatgttggccaggctggtcttggactcctgacttcaggtgatctgctcg s panTro4.chr19 59280798 57 + 63644993 ggtttcaccatgttggccaggctggtcttggactcctgacttcaggtgatctgctcg i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56159818 57 + 60714840 ggtttcaccatgttggccaggctggtcttgaactcctgacttcaggtgatctgctcg i ponAbe2.chr19 I 5140 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102901986 4830 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=293609.000000 s hg38.chr19_GL949753v2_alt 330651 553 + 796479 ccttggcctcccaaa-gtgctgggattacaggcgtgagccaccatgcctgaccTAAACCTTTAAAAGTGGATACTTGTGTGAGAGAGAGAAACCATGCAGAAGAGATTAAATAAAATTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGATATGATGCAAAAATATTTTTAAATATAACTCATAAACTTAAAGATAAAACCTAAAGAAAAAGAAAATGCggtaaaacaggtgggaggggaagcaggaaaggcaggcacact-cgtgtaactgtgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTACTGCAAATGATTATAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccaagccatcaagaagaccagaatgctctgggcagatcttctgaaagagggcgctgagggtggatggaga s panTro4.chr19 59280855 553 + 63644993 ccttggcctcccaaa-gtgctgggattacaggcgtgagccaccatgcctgaccTAACCCTTTAAAAGTGGATACTTGTGTGAGAGAGAGAAACCATGCAGAAGAGATTAAATAAAATTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGCGTATTTTCTTGAATAGATATGATGCAAAATTATTTTTAAATATAACTCATAAACTTAAAGATAAAACCTAAAGAAAAAGAAAATggggtaaaacaggtgggaggggaagcaggaaaggcaggcacatt-tgtgtaactatgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTACTGCAAATGATTATAAGTGCTGTTACAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccaggccatcaagaagaccagaatgctctgggcagatcttctgaaagagggcgctgagggtggatggaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56159875 553 + 60714840 ccttggcctcccaaa-atgctgggattacaggcgtgagccaccatgcctggccTAAACCTTTAAAAGTGGATACTTGTGTGTGAGAGAGAAACCATGCAGAGGAGATTAAATAAAATTAGATGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGATATGATGCAAAAATATTTTTAAATATAACTCATAAACTCAAAGATAAAACCTAAAGAAAAAGAAAATggggtaaaacaggtaggaggggaagcaggaaaggcaggcacact-cgtgtaattatgattgaaagaaaatctgtatacaagtggacctgcacagttcaaacctgtggagttcaaagctcaactgTATGTTATTGCAAATGATTGTAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccaggaagagcttctcccaccgagagaccagaccatcaaaaagaccagaacgctctgggaagatcttctgaaagagggcgttgagggtggatggaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102906816 555 - 106955855 ctttgccctcccaaaggtgctgggattacaggcatgagccaccatgcctggccTAAACCTTTAAAAGTGGATACTTGTGTGTGAGAGAGAAACCACGCAGAAGAGATTAAATAAAACTAGACGGATATAATTGTGTCTTGTTTCTTGTTTTGGTTTAGAAATATAAGTGTATTTTCTTGAATAGGTATGATGCAAAAATATTTTtaaatataactcataaacttaaagataaaacctaaagaaaaagaaaaTggggtaaaacaggtgggaggggaagcaggaaaggcaggcacactccgtgtaactatgattgaaagaaaatctgtatataagtggacctgcacagttcaaacctgtggagttcagagctccactgTCTATTATTGCAAATGATTGTAAGTGCTGTTATAGAAACATTCAAAGACCAGAAAAGGAccacaatggctgaccacacatagccagggagagcttctcccaccgagagaccagaccatcaagaagaccagaacgccctgggcagatcttctggaagagggcgttgagggtggatggagg i nomLeu3.chr10 I 4830 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=21172.000000 s hg38.chr19_GL949753v2_alt 331204 83 + 796479 gaggacacagatcctgaggatggatggagggaggacacagatcctgaggatgcatggagGGAGGACACAGATCCTGAGGATGG s panTro4.chr19 59281408 83 + 63644993 gaggacacagatcctgaggatgcatggagggaggaCACAGATCCTGAGGATGGATGGAGGGAGGACGCAGATCCTGAGGGTGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907371 83 - 106955855 gaggacgcagatcctgcgggtggatggagggaggacgcAGATCCTGAGGGTGGATGGAGGGAGGACGCAGATCCTGAGGGTGG i nomLeu3.chr10 C 0 T 87 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=282.000000 s hg38.chr19_GL949753v2_alt 331287 3 + 796479 ATG s panTro4.chr19 59281491 3 + 63644993 ATG i panTro4.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907454 87 - 106955855 T e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=6922.000000 s hg38.chr19_GL949753v2_alt 331290 30 + 796479 GAGGGAGGAAACAGATCCTGAGGGTGGATG s panTro4.chr19 59281494 30 + 63644993 GATGGAGGACACAGATCCTGAGGGTGGACG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907367 30 - 106955855 gagggaggacgcagatcctgcgggtggatg i nomLeu3.chr10 T 87 T 42 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=482.000000 s hg38.chr19_GL949753v2_alt 331320 5 + 796479 GATGG s panTro4.chr19 59281524 5 + 63644993 GATGG i panTro4.chr19 C 0 T 29 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907397 42 - 106955855 T e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 331325 5 + 796479 ATGGA e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907397 42 - 106955855 T e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I e panTro4.chr19 59281529 29 + 63644993 T a score=1155.000000 s hg38.chr19_GL949753v2_alt 331330 12 + 796479 GGACACAGATCC s panTro4.chr19 59281500 12 + 63644993 GGACACAGATCC i panTro4.chr19 T 29 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907397 42 - 106955855 T e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=18775.000000 s hg38.chr19_GL949753v2_alt 331342 77 + 796479 TGAGGGTGGATGAATGGAGGGAGGACACAGATCCTGAGGGTGGATGGAGGGAGGACACAGATCCTGAGGATGGATGA s panTro4.chr19 59281512 77 + 63644993 TGAGGGTGGACGGATGGAGGGAGGACACAGATCCTGAGGGTGGATGGAGGGAGGACACAGATCCTGAGGATGGATGG i panTro4.chr19 C 0 T 60 s nomLeu3.chr10 102907355 73 - 106955855 tgagggtgg----atggagggaggacgcagatcctgcgggtggatggagggaggacgcAGATCCTGAGGGTGGATGG i nomLeu3.chr10 T 42 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=4405.000000 s hg38.chr19_GL949753v2_alt 331419 17 + 796479 AAGGAGGACACAGATCC s panTro4.chr19 59281529 17 + 63644993 AGGGAGGACACAGATCC i panTro4.chr19 T 60 C 0 s nomLeu3.chr10 102907428 17 - 106955855 AGGGAGGACGCAGATCC i nomLeu3.chr10 C 0 T 90 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=15489.000000 s hg38.chr19_GL949753v2_alt 331436 60 + 796479 TGAGGGTGGATGGAGGGAGGACACAGATCCTGAGGATGCGTGGAGGGAGGACACAGATCC s panTro4.chr19 59281546 60 + 63644993 TGAGGGTGGATGGAGGGAGGACACAGATCCTGAGGATGGATGGAGGGAGGACACAGATCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907355 60 - 106955855 tgagggtggatggagggaggacgcagatcctgcgggtggatggagggaggacgcAGATCC i nomLeu3.chr10 T 90 T 68 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=1312.000000 s hg38.chr19_GL949753v2_alt 331496 16 + 796479 TGAGGATGGATGGAGG s panTro4.chr19 59281606 16 + 63644993 TGAGGATGCATGGAGG i panTro4.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907415 68 - 106955855 T e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=22409.000000 s hg38.chr19_GL949753v2_alt 331512 94 + 796479 GAGGACGTAGATCCTGAGGGTGGATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAAGGAGGACGCAGATCCTGAGGGTGGAGGGATGGAGG s panTro4.chr19 59281622 94 + 63644993 GAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGCAGATCCTGAGGGTGGATGGATGGAGG i panTro4.chr19 C 0 I 60 s nomLeu3.chr10 102907347 88 - 106955855 gagggcgt------tgagggtggatggagggaggacgcagatcctgcgggtggatggagggaggacgcAGATCCTGAGGGTGGATGGAGGGAGG i nomLeu3.chr10 T 68 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2630.000000 s hg38.chr19_GL949753v2_alt 331606 10 + 796479 ACGCAGATCC s panTro4.chr19 59281776 10 + 63644993 ACACAGATCC i panTro4.chr19 I 60 C 0 s nomLeu3.chr10 102907435 10 - 106955855 ACGCAGATCC i nomLeu3.chr10 C 0 T 90 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=5392.000000 s hg38.chr19_GL949753v2_alt 331616 22 + 796479 TGAGGATGGATGGAGGGAGGAT s panTro4.chr19 59281786 22 + 63644993 TGAGGATGCATGGAGGGAGGAT i panTro4.chr19 C 0 T 120 s nomLeu3.chr10 102907355 22 - 106955855 tgagggtggatggagggaggac i nomLeu3.chr10 T 90 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=24084.000000 s hg38.chr19_GL949753v2_alt 331638 92 + 796479 GCAGATCCTGAGGGTGGATGGATGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGCAGATCCTGAGGATGGATGGAGGGAGGACGC s panTro4.chr19 59281688 92 + 63644993 GCAGATCCTGAGGGTGGATGGATGGAGGATGCAGATCCTGAGGATGCATGGAGGGAGGACGCAGATCCTGAGGGTGGATGGAGGGAGGACAC i panTro4.chr19 T 120 C 0 s nomLeu3.chr10 102907377 92 - 106955855 gcagatcctgcgggtggatggagggaggacgcAGATCCTGAGGGTGGATGGAGGGAGGACGCAGATCCTGAGGGTGGATGGAGGGAGAAcac i nomLeu3.chr10 C 0 T 30 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=6281.000000 s hg38.chr19_GL949753v2_alt 331730 27 + 796479 AGATCCTGAGGGTGAATGGATGGAGGA s panTro4.chr19 59281780 27 + 63644993 AGATCCTGAGGATGCATGGAGGGAGGA i panTro4.chr19 C 0 T 90 s nomLeu3.chr10 102907439 27 - 106955855 AGATCCTGAGGGTGGATGGAGGGAGAA i nomLeu3.chr10 T 30 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=376.000000 s hg38.chr19_GL949753v2_alt 331757 3 + 796479 CGC s panTro4.chr19 59281717 3 + 63644993 TGC i panTro4.chr19 T 90 C 0 s nomLeu3.chr10 102907466 3 - 106955855 cac i nomLeu3.chr10 C 0 T 60 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=5525.000000 s hg38.chr19_GL949753v2_alt 331760 30 + 796479 AGATCCTGAGGGTGGACGGATGGAGGGAGG s panTro4.chr19 59281720 26 + 63644993 AGATCCTGA----GGATGCATGGAGGGAGG i panTro4.chr19 C 0 T 30 s nomLeu3.chr10 102907409 26 - 106955855 AGATCCTGA----GGGTGGATGGAGGGAGG i nomLeu3.chr10 T 60 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=8369.000000 s hg38.chr19_GL949753v2_alt 331790 34 + 796479 ACGCAGATCCTGAGGATGGATGGAGGGAGGACGC s panTro4.chr19 59281716 34 + 63644993 ATGCAGATCCTGAGGATGCATGGAGGGAGGACGC i panTro4.chr19 T 30 C 0 s nomLeu3.chr10 102907435 34 - 106955855 ACGCAGATCCTGAGGGTGGATGGAGGGAGAAcac i nomLeu3.chr10 C 0 T 60 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=6095.000000 s hg38.chr19_GL949753v2_alt 331824 22 + 796479 AGATCCTGAGGATGGATGGAGG s panTro4.chr19 59281750 22 + 63644993 AGATCCTGAGGGTGGATGGAGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 102907409 22 - 106955855 AGATCCTGAGGGTGGATGGAGG i nomLeu3.chr10 T 60 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56160428 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=11928.000000 s hg38.chr19_GL949753v2_alt 331846 22 + 796479 GAGGACACAGATCCTGAGGATG s panTro4.chr19 59281772 22 + 63644993 GAGGACACAGATCCTGAGGATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160428 22 + 60714840 gaggacacagatcctgaggatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907431 22 - 106955855 GAGGACGCAGATCCTGAGGGTG i nomLeu3.chr10 C 0 I 1 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=300.000000 s hg38.chr19_GL949753v2_alt 331868 1 + 796479 C s panTro4.chr19 59281794 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160450 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e nomLeu3.chr10 102907453 1 - 106955855 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=78349.000000 s hg38.chr19_GL949753v2_alt 331869 149 + 796479 ATGGAGGGAGGAcaccacgcccagctaatttttgtctttttaatagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcgtgatccgcccgcctcagtctcccaaagtgctgggattacaggcgtgagccacc s panTro4.chr19 59281795 149 + 63644993 ATGGAGGGAGGATaccacgcctggctaatttttgtctttttaatagagacggggtttcaacatgttggccaggcttgtctcaaactcctgacctcgtgatccgcccgcctcagtctcccaaagtgctgggattacaggtgtgagccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160451 149 + 60714840 atggagggaggacaccacgcccagctaatttttgtctttttagtagagacggagtttcaacatgttggccaggctggtctcaaactcctgacctcgtgttctgcccgcctcagcctcccgaagtgctgggattacaggtgtgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907454 149 - 106955855 ATGGAGGGAGAAcaccacgctcggctaatttttgtctttttagtagagacggggtttcaacatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 I 1 N 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2711.000000 s hg38.chr19_GL949753v2_alt 332018 10 + 796479 gcgcctggcc s panTro4.chr19 59281944 10 + 63644993 gcgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160600 10 + 60714840 gcacctggcc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47062703 239 + 50890351 I e rheMac3.chr19 60163838 241 + 64156825 I a score=2345.000000 s hg38.chr19_GL949753v2_alt 332028 2 + 796479 GG s panTro4.chr19 59281954 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160610 2 + 60714840 GG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55263083 2 + 59248254 GA i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47353969 2 + 51301725 GG i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 47062942 2 + 50890351 GG i chlSab2.chr6 I 239 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e rheMac3.chr19 60163838 241 + 64156825 I a score=5922.000000 s hg38.chr19_GL949753v2_alt 332030 3 + 796479 CTT s panTro4.chr19 59281956 3 + 63644993 CTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160612 3 + 60714840 CTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60164079 3 + 64156825 CTT i rheMac3.chr19 I 241 C 0 s macFas5.chr19 55263085 3 + 59248254 CTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353971 3 + 51301725 CTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062944 3 + 50890351 CTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=422895.000000 s hg38.chr19_GL949753v2_alt 332033 214 + 796479 TCTTAGTCATGTTTAATTTAAC-GAAAATTTTATAATGATCT-GAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATGCATCAAAAATA--GGACTGTCTTTATTGTTGAAAAACATTGT-ATTTCTT-----TA-----ATAATGAACAACTTATTAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT s panTro4.chr19 59281959 219 + 63644993 TCTTCGTCATGTTTAATTTAAC-GAAAATTTTATAATGATCT-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACATTGT-ATTTCTT-----TACTCTAATAATGAACAACTTAATAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160615 215 + 60714840 TCTCAGTCATGTTTAATTTAACAGAAAATTGTATAATTATCT-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACATTGT-ATTTCTT-----TA-----ATAATGAGCAAGTTATTAAGTTATGATGTGATTTAACTGGTATGAAAATTTGGGAAAT--CAGAATCTAGGTAAAGTACAGATTAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103095045 208 - 106955855 TTTTAGCCATATTTAACTTGACATACTATTTTATAATTACCTAAAAATTTAGATGCATTGCAAAA-----ACATTAGGATTTACCAAAACAA--GAACAGTATTTTT------ATAATATTTTAACTGGTT-----TA-----ATAATTAAAAAGTTGTTAAGCTACAACGGGATTTAACCATCATTAAAATTTGGAAAATACTAGAATCTTGGTAAAGTGTAGATTAGTT i nomLeu3.chr10 N 0 N 0 s rheMac3.chr19 60164082 215 + 64156825 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTGGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACACTGT-ATTTGTT-----TA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATTTTGGTAAAGTACAGATTAGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55263088 215 + 59248254 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTGGGATTCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACACTGT-ATTTGTT-----TA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47353974 222 + 51301725 TCTTAGTCATGTTTAATTTAACAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAAGAATTCAAATTAGGATCCATCAAAAATATGTGACTGTCTTTATTCTTGAAAAACATTGT-ATTTGTTTACTCTA-----ATAATGAACAAGTTATTAAGTTACGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAgattagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47062947 220 + 50890351 TCTTAGTCATGTTTAATTTAGCAGAAAATTTTATAAGTATCC-AAAATGTAAATGGTTTTTAAGGAATTCAAATTAGGATCCATCAAAAATA--GGACTGTCTTTATTCTTGAAAAACTTTGT-ATTTGTTTACTCTA-----ATAATGAACAAGTTATTAACTTATGATGTGATTTAACTGGTATGAGAATTTGGGAAAT--TAGAATCTTGGTAAAGTACAGATTAGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=785543.000000 s hg38.chr19_GL949753v2_alt 332247 444 + 796479 AAAAGAAAAAGATGCTTTAGAAAAATCAAAGACATTTCCGAAAGAATGTACAATAATCAATAGCAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAACACGCATTTCACGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGCGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTGGAGATCAATCAATAAATCCAAATAGGAGAAGGAGGAGGGGTCTGTAAAAGCAGAAAGCAATTTCAGAAATGAATATATATAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCTGTATGCCCTTAAATAACGGCAATAATTCATGAAAAAATAAAGACCTTGTCCTTTCTTTAT s panTro4.chr19 59282178 443 + 63644993 AAAAGAAAAAGATGCTTTAGAAAA-TCAAAGACATTTCCGAAAGAATGTACAATAATCAATAACAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAACAAGCATTTCATGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGCGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTGGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGGGGTCTATAAAAGCAGAAAGCAATTTCAGAAATGAATATATATAGTGTACTAAATAAATTGAGCTGGATGGTAAGTAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCCGTATGCCCTTAAATAACGGCAATAATTCATGAAAAAATAAAGACCTTGTCCTTTCTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56160830 439 + 60714840 AAAAGAAAAAGATGCTTTACAAAA-TCAAAAACATTTCTGAAAGAATGTACAATAATCAGTAACAGTTTGGCCCCAGTGTTATAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAATACGCATTTCATGTAGTATATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAATGTAATAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGGGGTCTATAAAAGCAGAAAGCAATCTCAGAAATG----TATATAGCGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGACTCATAGACCAGCTGTGATGATGGCTCTGCACGCCCTTAAAGAACGGCAATAATTCATGAAAAAGTAAAGACCTTCTCCCTTCTTTAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60164297 439 + 64156825 ----GAAAGAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTATAGAGGATGGGGAAAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTCTATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAAGATAAAAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAATCTCACAAATGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAACTAAAAGCAACAAGAAAATATCTGTAAATCCTAGACCAGCTGTGATGATGGCTCCATATGCCCTTAAGGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTCCTTTCTTTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55263303 443 + 59248254 AAAAGAAAGAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTATAGAGGATGGGGAAAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTCTATGTGCACAAATCTTTTTCTTTTGTTGGGAAGAAAATGTTTTATCACAACAAAGATAAAAAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAATCTCACAAATGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAACTAAAAGCAACAAGAAAATATCTGTAAATCCTAGACCAGCTGTGATGATGGCTCCATATGCCCTTAAGGAACTGCAAAAATTCATGAAAAAGTAAAGACCTTCTCCTTTCTTTAT i macFas5.chr19 C 0 T 44027 s papAnu2.chr19 47354196 443 + 51301725 aaaagaaaaagatgctttAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTGTAGAGGATGGGGAGAAGGtggaagaatgagaaaataatacacatttcaTGTAGTATATGTGCAcaaatcttttccttttgttggGAAGAAAATGTTGTATCACAACAAAGATAATTAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATAAAAGCAGAAAGCAGTCTCACAAACGAATAGATATAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCCCCGTATGCCCTTAAAGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTGCTTTCTTTAT i papAnu2.chr19 C 0 T 27232 s chlSab2.chr6 47063167 443 + 50890351 AAAAGAAAAAGATGCTTTAGAAAA-TCAAAGACATTTCTGAAAGAATGTATAATAACCAATAACAGTTTGACCCCAGTGTTGTAGAGGATGGGGAGAAGGTGGAAGAATGAGAAAATAATACACATTTCATGTAGTATATGTGCACAAATCTTTTCCTTTTGCTGGGGAGAAAATGTTGTATCACAACAAAGATAATTAATTTAGCAACTTTGTTCTAGAGATCAATCAATAAATCCAAATAGGAGAAAGAGGAGTGGTCTATCAAAGCAGAAAGCAATCTCACAAATGAATATATACAGTGTACTAAATAAATTGAGCTGGATGGTAAATAAAGGCAACAAGAAAATATCTGTGAATCCTAGACCAGCTGTGATGATGGCTCCGTATGCCCTTAAAGAACTGCAATAATTCATGAAAAAGTAAAGACCTTCTGCTTTCTTTAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=1419.000000 s hg38.chr19_GL949753v2_alt 332691 5 + 796479 CAAAG s panTro4.chr19 59282621 5 + 63644993 CAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56161269 5 + 60714840 CAAAG i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e papAnu2.chr19 47354639 27232 + 51301725 T e macFas5.chr19 55263746 44027 + 59248254 T e rheMac3.chr19 60164736 0 + 64156825 C a score=2357.000000 s hg38.chr19_GL949753v2_alt 332696 7 + 796479 TGAttta s panTro4.chr19 59282626 7 + 63644993 TGTttta i panTro4.chr19 C 0 I 4 s ponAbe2.chr19 56161274 7 + 60714840 TGAtttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47327407 7 + 51301725 tggttta i papAnu2.chr19 T 27232 I 4 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e macFas5.chr19 55263746 44027 + 59248254 T e rheMac3.chr19 60164736 0 + 64156825 C a score=107807.000000 s hg38.chr19_GL949753v2_alt 332703 184 + 796479 ttatttatttatttatttattttttagagacagagtctcgctctgtcacacccaggctggagtgcagtggctcgatctcagctcactgcaagctccgcttcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaattttttt s panTro4.chr19 59282637 181 + 63644993 ttatttatttatttatttattttttagagacagagtctggctctgt--cacccaggctggagtgcagtggctctatctcagctcactgcaagctccacctcccgggctcacgccattctcctgcctccgcctcctgagtagctgggactacaggcgcccgccaccacgcccggctaa-tttttt i panTro4.chr19 I 4 C 0 s ponAbe2.chr19 56161281 163 + 60714840 ---------------ttttttttttagagacacagtctcactgtgt--cgccgaggctggagtgcagtggtgcgatcttggctcactgcaagctccgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccg---ccacactcggctaa-tttttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55219719 176 + 59248254 ttatatgtcttttt-tttttccccctgagttggagtctcactgt----tacccaggctggagtgcagcggtgtgatctcagctcactgcaacctctgacgcgtgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggtgcccatcaccacgcccagct---cttttt i macFas5.chr19 T 44027 C 0 s papAnu2.chr19 47327418 176 + 51301725 tctttttttttttt-ttttttttcctgagttggagtctcactat----tacccaggctggagtgcagtggtgtgatcttagctcactgcaacctctgatgcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacccatcaccacgcccggct---cttttt i papAnu2.chr19 I 4 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C a score=53012.000000 s hg38.chr19_GL949753v2_alt 332887 116 + 796479 gtattcttagtatagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctgccaaagtgctgggattacaggcgtgagccact s ponAbe2.chr19 56161444 116 + 60714840 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctgctgacctcgtgatctgcccacctcgacctgccaaagtgctgggattacaggcatgagccacc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55219895 116 + 59248254 gtatttttagcagagtcggggtttcaccatgttggtcaagctggtcttgaacttctgacctcatgattcatccacctcagcctcccaaagtgctgagattacaggcgtgagccact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47327594 116 + 51301725 gtatttttagcagagtcggggtttcaccatgttggtcaagctggtcttgaacttctgacctcatgattcatccacctcagcctcccaaagtgctgagattacaggcgtgagccact i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C e panTro4.chr19 59282818 0 + 63644993 C a score=7091.000000 s hg38.chr19_GL949753v2_alt 333003 10 + 796479 gcgcccggcc s ponAbe2.chr19 56161560 10 + 60714840 acgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907603 10 - 106955855 gcgcccggcc i nomLeu3.chr10 N 0 C 0 s macFas5.chr19 55220011 10 + 59248254 gcgcttggcc i macFas5.chr19 C 0 I 43725 s papAnu2.chr19 47327710 10 + 51301725 acgcttgGCC i papAnu2.chr19 C 0 I 26919 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47063610 0 + 50890351 C e rheMac3.chr19 60164736 0 + 64156825 C e panTro4.chr19 59282818 0 + 63644993 C a score=1401340.000000 s hg38.chr19_GL949753v2_alt 333013 808 + 796479 CAAAGTGATTTTTatggaggtacaatttaggactaaatgaggcacattttacttctTGGAACGGCAACAGGAAAATTCCCATCCCGCAGCTCTCACAACTCAGATCTTAGCAATTGGAACAGAACAGGTTGTCACTGCTGAAGGACCAAGCAGAACAACGGTTTCAGGAAGCTTTAGCTCTAAATCCCAGTAGATGTAGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATTTAGACATCAACACATTTATATTCCTTGATTCTTTCTTCTCCCTAAGACTTAAACATATAGTCACCTTTTATCAAAAAGATATTTTATTTGTTTAAATGGAAGATATAGTTTACTTTCTTCACACAGATGCCAGAAATTTTCTATGAACGTAAAATCTTTGGTGCAATCAAGTGCATACTGCTTCCCAGATCCTACAAGAAAGGAGATTAAGGTGTAGAATTTTACACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAACACAACATGCTATCACCACAACTATTTTTAAATGTCTTAAGTAGTAGTTTCCATTGGACGGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACACGCTCTTGCTCCTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTAGACAAGAGGTGTTGGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA s ponAbe2.chr19 56161570 802 + 60714840 CAAAGTGATTTTTATGGAGGTACAATTTAGGACTAAATGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCACAGCTCTTACAACTTAGATCTTAGCAATTGGAACAGAACAGGTTTTCACTGCTGAAGGACTGAGCAGAACAACGGTTTTAGGAAGCTTTAGCTCTAAATCCAAGTGGATCTGGAGCAGGTGCAAAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATTTAGACATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATA--GTCACCTTTTATCAAAAAGAAA----ATTTGTTTAAATGGAAGATTCAGTTTGCTTTCTTCACACAGATGCCAGAAATTTTCTATAAACATAAAATTGTGGGTGCAATCAAGTGGCTACTGCTTCCCAGATCCTATAAGAAAGGAGACTAAGGTGTAGAATTTTGTACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACATGCTATCACCACAACTATTTTTAAATGTCTTAAGTAGTAGTTTCCATTGGACAGCCGGTGTGTAAGCAGGAGCCAAGAGTAAAACACGCTCTTGCTCCTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAGTGGGGCTATGACAGAGAAGATAGACAAGAGACGTCAGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102907613 806 - 106955855 CAAAGTGATTTTTATGGAGGTACAATTTAGGACTAAATGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCTGCAGCTCTTACAACTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACTGCTGAAGGACTGAGCAGAACAACGGTTTTAGGAAGCTTTAGCTCTAAATCCCAGTGGATGTGGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACATTCAAATCTGGTTAAGTGTCAGAATTGCATTTAGGCATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATGTAGTCATCTTTTATCAAAAAGATATTTTATTTGTTTAAATGGAAGATATAGTTTACTTTCTTCATACAGATGCCAGAAATTTTCTATAAACATAAAATCGTGGGTGCAATCAAGTGCATACCGCATCCCAGATCCTATAAGAAAGGAGATTAAGGTGTAGAATTTTGTACTCATCACAGAAAGTCTTCCGAGACTAACTGGCATCACTAACCGAAATACAACATGCTATCACCACAACGATTTTTAAATGTCTTAAGCAGTAGTTTCCATTGGA-AGCCGGTGTGTAAGCAGGAGCCAAGAGTGAAACACGCTCTCACTCCTCTTCCCAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTCTTCATCCGGAGAGAGTGTTTTAAATGGGGCTATGAGAGAG-AGGTAGACAAGAGGTGTCAGGCAGCCCTGGACACCCTCAGAAAATATCCCTTCTTCATGAATTTATTTTCTATGTTCAGTTTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60164736 787 + 64156825 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATGAGGCACGTTTTACTGCTTGGAACAGCAACAGGAAAATTCTCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCTAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAAGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTA-ACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i rheMac3.chr19 C 0 I 62 s macFas5.chr19 55263746 787 + 59248254 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATGAGGCACGTTTTACTGCTTGGAACAGCAACAGGAAAATTCTCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCTAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTTTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAAGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTA-ACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i macFas5.chr19 I 43725 I 1 s papAnu2.chr19 47354639 786 + 51301725 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAGTGAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCCAAATCCCAGTGGATCTGGAGCA-GTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGCAGACATCAACACATTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACGTATAGCCaccttttatcaaaaagatattttatttgtttaagtgGAAGATATAGTTTACTTTCTTCACATGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATGACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAAAGACTGTGAGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACAGAGAAGGTAGACAAGAGGTGTCGGGCAGCCCTGGACA-CCTCAGAAAATATCCCCGcttcatgaatttattttctatgttcaGTTTTG i papAnu2.chr19 I 26919 I 1 s chlSab2.chr6 47063610 788 + 50890351 CAAAGTGATTTTTATGGAGGTACAATGTAGGACCAAATAAGGCACATTTTACTTCTTGGAACAGCAACAGGAAAATTCCCATCCCGCAGCTCTTACAGCTTAGATCTTAGCAATCGGAACAGAACAGGTTTTCACGGCTGAAGGACTGAGCAGAACAACAGTTTTTGGAAGCTTTAGCTCCAAATCCCAGTGGATCTGGAGCAGGTGCAGAGCTCTGGGGACTCTCAAAGCACTTTTAAATCTGGTTAAGTGTCAGAATTGCATGTAGACATCAACACACTTATATTCCTTGATTATTCCTCCTCCCTAAGCCTTAAACATATAGCCACCTTTTATCAAAAAGATATTTTATTTGTTTAAGTGGAAGATATAGTTTACTTTCTTCACACGGATGCCAGAAATTTTCT-----------ATTGTTGGTGCAATCAAGTGCATACTGCGTCCCAGATCCTATAACAAAGGAGATGAAGGTGTATAATTTTATACTCATCACAGAAAGTTTTCAGAGACTAACTGGCATCACCAACCAAAATACAACGTGCTACCACCACAACTATTTTCAAATGTCCTCAGTAGTAGTTTCCACTGGACAGCAGGTGTGTAAGCAGGAGCCAAGAGTGAAACATG---------CTCTTCCTAGCAAGAGAGCAACGACTGTGCGGTTTGGTGTATTCATCCAGAGAGAGTGTTTTAAATGGGGCTATGACGGAGAAGGTAGACAAGAGGTGTCGGGCAGCCCTGGACACCCTCAGAAAATATCCCCGCTTCATGAATTTATTTTCTATGTTCAGTTTTG i chlSab2.chr6 C 0 I 1 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 59282818 0 + 63644993 C a score=12950.000000 s hg38.chr19_GL949753v2_alt 333821 11 + 796479 CACTaaaaggt s ponAbe2.chr19 56162372 10 + 60714840 CACTAAAAGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908419 11 - 106955855 CACTAAAAGGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55264534 11 + 59248254 CACTAAAAGGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47355426 11 + 51301725 CActaaaaggt i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47064399 11 + 50890351 CACTAAAAGGT i chlSab2.chr6 I 1 I 734 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e rheMac3.chr19 60165523 62 + 64156825 I e panTro4.chr19 59282818 0 + 63644993 C a score=911.000000 s hg38.chr19_GL949753v2_alt 333832 11 + 796479 aaaaaaaaagt s nomLeu3.chr10 102908430 11 - 106955855 aaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55264545 11 + 59248254 tatatatatat i macFas5.chr19 C 0 I 35 s papAnu2.chr19 47355437 11 + 51301725 aaaatatatac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e ponAbe2.chr19 56162382 0 + 60714840 C e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47064410 734 + 50890351 I e rheMac3.chr19 60165523 62 + 64156825 I e panTro4.chr19 59282818 0 + 63644993 C a score=443.000000 s hg38.chr19_GL949753v2_alt 333843 20 + 796479 taaaaaaaagaaaaaaaaag s ponAbe2.chr19 56162382 20 + 60714840 TAAAAAAAAGGAAAAAAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908441 20 - 106955855 aaaaaagaaagaaaaaaaaG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165585 20 + 64156825 tgtatatatatacacatatC i rheMac3.chr19 I 62 C 0 s macFas5.chr19 55264591 20 + 59248254 tgtatatatatacacatatC i macFas5.chr19 I 35 C 0 s papAnu2.chr19 47355448 9 + 51301725 ---atatatata-------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e chlSab2.chr6 47064410 734 + 50890351 I e panTro4.chr19 59282818 0 + 63644993 C a score=318394.000000 s hg38.chr19_GL949753v2_alt 333863 178 + 796479 tccaccctatagtttgtataacaaacattctcacttgttcatgctgtattcaacgtcgagcccattttctttcccctactacaaaatcccaccgctggggtcctggtacctacagtgatggttctgaataaagccctccttactctgctttgataaaggtcaccgggtaatctttctc s ponAbe2.chr19 56162402 178 + 60714840 TCCACCCTATAGTTTGTATGACAAACattctcacttgttcatgcggtattcaacgtcgagcccattttcttgcccctactacaaaatcccaccgctgtgatccttgtacctacagtgatggttctgaataaagccctccttactttgctttaacaaaggtcactgggtaatctttctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908461 178 - 106955855 TCCACCCTATAGTTTGTATGACAAACattctcacttgttcatgctgtgttcaacgtcaagcccattttcttgcctctgctacaaaatcccaccgctgtggtccttgtacctacagtgatggttctgaataaagcccttcttatttggctttgataaaggtcactgggtaatctttctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165605 178 + 64156825 TCCACCCTATAGTTTATATGACAAACattctcacttgttcaagctgtattcaatgtcaagcccattttatttcccctactacaaaatcccaccgctgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatctttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264611 178 + 59248254 TCCACCCTATAGTTTATATGACAAACattctcacttgttcaagctgtattcaatgtcaagcccattttatttcccctactacaaaatcccaccgctgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatctttctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355457 178 + 51301725 tccaccCTATAGTTTGTATGACAAACATTCTCACTTGTTCAAGCTTTATTCAATGTCAAGCCCATTTTATTTCCCCTACTACAAAATCCCACCGTTGTGGTCCTTGTACCTACAGTGATGGTTCTGAATAAAGCCCTCCCTACTTTGCTTTAATAAAGGTCACTGGGTAATGTTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065144 178 + 50890351 TCCACCCTATAGTTTATATGACAAACattctcacttgttcacgctgtattcaatgttaagcccattttatttcccctactacaaaatcccaccactgtggtccttgtacctacggtgatggttctgaataaagccctccctactttgctttaataaaggtcactgggtaatgattctc i chlSab2.chr6 I 734 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 59282818 0 + 63644993 C a score=126759.000000 s hg38.chr19_GL949753v2_alt 334041 63 + 796479 tcaacGCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTCTGC s panTro4.chr19 4207942 63 - 63644993 tcaacaCCCTGCCCAGCTGGTCCAATGGTCTGAGAAAGGGAAGTCCAGACACCTGGCCTCTGC i panTro4.chr19 n 0 I 1854 s ponAbe2.chr19 56162580 51 + 60714840 tcaacaCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACC------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908639 63 - 106955855 tcaacaCTTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTCTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165783 61 + 64156825 tcaacaCCTTGCCCAG-TGGCCCA-GGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264789 61 + 59248254 tcaacaCCTTGCCCAG-TGACCCA-GGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355635 63 + 51301725 TCAACACCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGTCAGACCCCTGGCCTGTGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065322 63 + 50890351 tcaacaCCTTGCCCAGCTGGCCCAGGGCTCCAAGAAAGGGAAGGCCAGACCCCTGGCCTGTGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I a score=20268.000000 s hg38.chr19_GL949753v2_alt 334104 12 + 796479 CCTGGTTACTCA s ponAbe2.chr19 56162631 12 + 60714840 CCTGGTTACTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908702 12 - 106955855 CCTGGTTCCTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165844 12 + 64156825 CCTGGATACTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264850 12 + 59248254 CCTGGATACTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355698 12 + 51301725 CCTGGATACTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065385 12 + 50890351 CCTGGATACTCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45571916 1966 + 49145316 I e panTro4.chr19 4208005 1854 - 63644993 I a score=303732.000000 s hg38.chr19_GL949753v2_alt 334116 138 + 796479 CAGGGACATCTGT--GAATATCTGCTGCTGCCCCATCTGGCCCCGGTGAGGCTGCTCCTCCCTTTCACGTTGGGCCCCACTGCAGCCTCCTGGTGTTCA--------CCGCCAGGGCACACCCCAGGGGAACTGGGGTGGGATCATAA s panTro4.chr19 4209859 138 - 63644993 CAGGGACATTTGT--GAGTATCTGCTGCTGCCCCATCTGGCCCAAGTGAGGCCTCCCCTCCCCTCCATGTTGGGCCCCACTGCAGCCCCCTGATGTTCA--------CCCCCAGGACACTCCTCAGGGGAATTAGGGTGTGGTCATGA i panTro4.chr19 I 1854 C 0 s ponAbe2.chr19 56162643 138 + 60714840 CAGGGACATCTGT--GAGTATCTGCTGCTGCCCCATCTAGCCCAGGTGAAGCTGCTCCTCCCTTTCATGTTGGGCCCCACTGCAGCCTCCTGATGTTCA--------CCGCCAGGACACACCCCAGGGGAATTGGGGTGGGGTCATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908714 138 - 106955855 CAGGGACATCTGT--GAGTATCTAAGCCTGCTCCATCTGGCCCAGGTGAGGCTGCTCCTCCCTTTCACGCTGGGCCCCACTGCAGCCTCCTGGTGTTCA--------CCGCCAGGACACACCCCAGGGGAATTGGGGTGGGGTCATAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165856 127 + 64156825 CAGGGATGTCTGT--GTGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCCCCCTTCCACGTTGGGCCCCACTGCAGCCTCCTGGTGCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264862 124 + 59248254 CAGGGATGTCTGT--GTGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCCCCCTTCCACATTGGGCCCCACTGCAGCCTCCTGGTGCT-------------------CACACCCCAGGGGAATTGG---GGAATCACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355710 127 + 51301725 CAGGGATGTCTGT--ATGTATATGCTGCTGCCCCATCTGGCCCAGGTGAGGCCTGTCCTCCCTTCCACGTTgggcctcactgcagcctcctggtgCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065397 114 + 50890351 CAGGGATATCTGG--GAGTATATGCTGTTGCCCCATCTGGCCCAGGTGAGGCCTGTCCTCCCTTCCACATTGGGCCTCAC-------------TGCT-------------------CACACCCCAGGGGAATTGGGGTGGGGTCACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45573882 148 + 49145316 CAGGGGCGTCTGTGAGAGTATCTGCTGCTGCCCCACCTGGTCAAGGTGGTGTCTCTCCTCCCCTCCACACTGGACCCCACTGCAGACCCCTGGCATGCACCCCTCCCCCCCCAGGACTCATCTCAGGGGAATCGGGGCGAGGTCatga i calJac3.chr22 I 1966 I 11206 e canFam3.chr1 103003988 0 + 122678785 I a score=106458.000000 s hg38.chr19_GL949753v2_alt 334254 54 + 796479 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAATT s panTro4.chr19 4209997 54 - 63644993 TCACAGGGTGAGCCTTCCCTCTCTGCCTGGCCACACTGCACCACCGGGTGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162781 54 + 60714840 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908852 54 - 106955855 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAGTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60165983 43 + 64156825 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCGCACTGCACTG----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55264986 43 + 59248254 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCGCACTGCACTG----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355837 43 + 51301725 GCACAGGGTAggccctccctctctgcctggcCACACTGCACTG----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065511 54 + 50890351 GCACAGGGTAGGCCCTCCCTCTCTGCCTGGCCACACTGCACTGCCAGGTGAGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45574030 11206 + 49145316 I a score=211720.000000 s hg38.chr19_GL949753v2_alt 334308 130 + 796479 AAACATGGCTCTTCCCCCAGGTGGTGCTTGGGGGCCCGTGCAGCAGGAGGGACATCTTCTCCGCACAGCAATGTTCCCAGATCTCACCACCCTGAGTTCTGGCCCCTGCGTTGGGCGGGTTGGCAAGTCA s panTro4.chr19 4210051 127 - 63644993 AAACGTGGCTTCTCCTCCAGGTGG-GCTTGGGGG-CGGTGGAGCAGGAGGGACATCCTCTCCATACAGCAGTGTCCCCAGA-CCCATCGCGCTGAGTCCCAGCCCCTGCATTGGGCGGGTTGGAGGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162835 129 + 60714840 AAACATGGCTCCTCCCCCAGGTGGTGCTTGGGGGCCCGTGCAGCAGGAGGGACATCTTCTCCGCACAGCAATGTCCCCAGACCTCACTACGCTGAGTTCTGGCCCCTGCGTTGGGTGGGTTGGCAAGT-A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102908906 127 - 106955855 AAACATGGCTCCTCCCCCAGGTGGTGCTTGGGGGTCCATGCAGCAGGAGGGACA---TCTGTGCACAGCAATGTCCGCAGACCTCATCACCCTGAGTTCTGGCCCCTGCATTGGGCAGGCTGGCAAGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166026 111 + 64156825 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCACGAGGGACAT---CTCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCAGCGTTGGGTGGGTTGGAAGGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265029 111 + 59248254 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCACGAGGGACAT---CTCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCAGCGTTGGGTGGGTTGGAAGGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355880 111 + 51301725 ---------------CCCAGGTGGTGCTTGGGGG-CCGTGCAGCAGGAGGGACAT---CGCCACACAGCAATGTCCCCAGACCTCATCACCCTGAGTTCTGGCCCCTGTGTTGGGTGGGTTGGAAggtga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3673610 127 - 50890351 AAACGTGGCTTCTCCTCCAGGTGG-GCTTGGGGA-CTGTGGAGCAGGAGGGACATCCCCTCCACACAGCAGTGTCCCCAGACC-CATCGCCCTGAGTCCCAACCCCTGCATTGCGCAGGTTGGAGGATCC i chlSab2.chr6 n 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45574030 11206 + 49145316 I a score=594611.000000 s hg38.chr19_GL949753v2_alt 334438 244 + 796479 AG-AGAAAAAACAAGCCCCTGCATCTAATTTTCTGTCTTCTCTCTGGGCCCTTCCTCTTTCCACTAATATGTCAAGAAACAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTCTATCTGTCCTGCTTTCCACTGTGACCTCACCACCTGAACTTCCTGGACTTCCTTACACTGGAGCAGACACTGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACCCA---TCCTCT s panTro4.chr19 4210178 247 - 63644993 AGAAGAAAAGATGAGTCGCTGCCTCTGCTTTTCTGTCCTCTGCCTGGACCCATCCTCTTTCCACCAAT-CCCCAAAAAAGAACAGTTGGGTGCTTTTGTTTAATTTCCCCTAAACCACGTCTGTCCTGCTTTTCACTGAGGCCTGGCTGCCTGCACATCCTGGACTTCCTTACACTGGAGCAGGTACTGGGGCCT-----GCTCAGCCCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACAGCCTCCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56162964 243 + 60714840 AG-AGAAAAAACAAGACCCTGCATCTAATTTTCTGTCTTCTCTCTGGGACCTTCCTCTTTCCACTAATATGTCAACAAATAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTCTATCTGTCCTGCTTTCCACTGTGG-CTCACCACCTGAACTTCCTAGACTTCCTTACACTGGAGCAGACACTGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACA---CCCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909033 242 - 106955855 AG-AGAAAAAACAAGCCCTTGCATCTAATTTTCTGTCTTCTCTCTGGGCCCTTCCTCTTTCCACTAATACATCAAGAAATA--AGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACTGCCTGAACTTTCTGGACTTCCTTACACTGGAGCAGACATGGGCATCT-----GCTCAGCTCTCCTGTGCTCTGCAAGGGACAGAAAAATTCACACA---TCCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166137 250 + 64156825 AGAAGAAAAGACAGTCCCCTGCATCTGATTTTCTGTCTTCTCTCTGGACCCATCCTCCTCCCACTAATACTTCAAGAAATAACAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACCGCCTGAACTTCCTAGACTTCCTTGCACTGGAGCAGACAATGGCCTCTGCTCAGCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAATTCACACA---TCCTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265140 250 + 59248254 AGAAGAAAAGACAGTCCCCTGCATCTGATTTTCTGTCTTCTCTCTGGACCCATCCTCCTCCCACTAATACTTCAAGAAATAATAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTGACCTCACCGCCTGAACTTCCTAGACTTCCTTGCACTGGAGCAGACAATGGCAtctgctcagctcagctctcctgtgctctgcAAGGGGTAGAAAAATTCACACA---TCCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47355991 249 + 51301725 agaagaaaagacagtcCCCTGCAtctgattttctgtcttctctctgggTCCATCCTCCTCCCACTAATACTTCAAGAAATAATAGTGTGGTATTTTTGCTTAATTTCCCCTAAACTATATCTGTCCTG-TTTCCACTGTGACCTCACCGCCTGAACTTCCTGGACTTCCTTGCACTGGAGCAGACAGTGGCATCTGCTCGGCTCAGCTCTCCTGTGCTCTGCAAGGGGTAGAAAAGTTCACACA---TCCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3673737 244 - 50890351 AGAAGAAAAGATGAGTTGCTACCTCTGCTCTTCTCTCCTCTCCCTGGACCCCTCCTCTTTCCACCAAT-CCCCACACAAGAACAGTTGGGCGCTTTTGTTTAATTTCCCCTAAACCATGGCTGCCCTGCTTTTCACTGCGGCCTCACTGACTGGAATTCCTGCACTTCCTTACACCGGAACAGGTACTGG-----GGTCCGCTCAGCCCTCCTGTGCTCTGCAGGGGGTAGAAGAAGTCACACA---TCCTCT i chlSab2.chr6 C 0 I 193 s calJac3.chr22 45585236 232 + 49145316 -aaagaaagaaaTAGTCCCTGCATCTGATTTTCTGTCTTCTCTCTTGGCTCTTCCTCTTTCCACTATT------------AACAGTTCGGTGTTTTTGCTTCAATTCCCCTAAACTATATCTGTCCTGCTTTCCACTGTTACCTCACTGCCTGAACTTCCTGGACTTCCTTACACTGGAGCAGACGCTGGGACCT-----GCTCAGCCCTCCTGTGCTCTGCAAGGGGTAAAAGAATGCCCAAA---TCCTCT i calJac3.chr22 I 11206 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=295583.000000 s hg38.chr19_GL949753v2_alt 334682 137 + 796479 GCTATGTGCAGACTGTCCACCTTCTGCTATAGAGTTCATGTACCCACCTGTCAACCTCAT------AGTCAAA--CAAACAAGACGTTATGGGGGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAGAAGAAAGACAGAGAT s panTro4.chr19 4210425 144 - 63644993 GCTAAGGTCAAGCTG-CCACCCTTTGCTGAAGGCCTCATTTACCCACCTGTCCACCTCAGGGTCCAAGCCAAA--CAAACAAGACGTGATGGGAGAAGACACTGCGCTAATAGTTGAAAAACAACCAGAGAGAAGAAAGACAGAGAT i panTro4.chr19 C 0 I 27 s ponAbe2.chr19 56163207 137 + 60714840 GCTATGTCCAGACTGTCCACCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--AAAACAAGATGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAGAAGAAagacagagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909275 137 - 106955855 GCTATGTCCAGACTGTCCACCTTCTGCTAAGGAGTTCATTTACCCACCCGTCAACCTCAG------AGTCAAA--CAAACAAGATGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACc--agagaagaaagacagagat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166387 137 + 64156825 CCTATGTCCAGACTGTCCGCCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--CGAACAAGACGTTATGGGAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAAAagaaagacagagat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265390 137 + 59248254 CCTATGTCCAGACTGTCCACCTTCTGCTAAAGAGTTCATTTACCCACCTGTCAACCTCAG------AGTCAAA--CGAACAAGACGTTATGGCAGAAAACACCCGGCTGATGGTTGAAAAACAACC--AGAAAagaaagacagagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356240 137 + 51301725 CCTATGTCCAGACTGTCTGCCTTCTGCTAAAGAGTTCCTTTACCCACCTGTCAACCTCAG------AGTCAAA--CAAACAAGACGTTATGGGAGAAAACACCCAGCTGATGGTtgaaaaacaacc--agaaaagaaagacagagat i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585468 139 + 49145316 GCTACGTCCAGACTGTTCACCTTTTGCTAAAGAGTTCATTTACCCACCTGTCACCCTCAG------AGTCAGAGTCAAAGAAGATGTTATGGGAGAAAACACTCCGCTGATGGTTGAAAAACAACC--agagaagaaagacagagat i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I a score=23613.000000 s hg38.chr19_GL949753v2_alt 334819 14 + 796479 -GTAGAAAAAGAGAC s ponAbe2.chr19 56163344 14 + 60714840 -gcagaaaaagagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909412 14 - 106955855 -gcagaaaaagagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166524 14 + 64156825 -acagaaaaagagac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265527 14 + 59248254 -acagaaaaagagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356377 14 + 51301725 -acagaaaaagagac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585607 15 + 49145316 gccaaaaaaagagac i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=271135.000000 s hg38.chr19_GL949753v2_alt 334833 212 + 796479 AAAGACggctggacgcagtggctcacgcctgtaatcccaggactttgggaggctgaggtgggcagatcacctgaggtcgggagttcaaaaccagcctaagcaacatggagagccccccgtctctaacaaaaatacaaaaaattagccgtgtgtggtggtgcatgcctgtaatcccagctgctcaggaggctgaggcaggagaatcgcttgaa s ponAbe2.chr19 56163358 211 + 60714840 agagacggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggcggatcacctgaagtcgggagttcgagaccagtctgaccaacatggagaa-accccgtctctaacaaaaatacaaaaaattagctgggtatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909426 211 - 106955855 agagacggctgggcgcagtggctcatgcctgtaatcccaggactttggggggctgaggcgggtggatcacctgaggttgggagttcgagaccagcctgaccaacatggagaa-accccgtctctaacaaaaatacaaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaagcaggagaatcgcttgaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166538 211 + 64156825 agagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggtggatcacctgaggttgcgagttcgagaccagcctgaccaacatgcagaa-atcccgtctctaacaaaaatacaaaaagttagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcagcagaattgcttgaa i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55265541 211 + 59248254 agagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggccgaggtgggtggatcacctgaggttgggagttcgagaccagcctgaccaacatgcagaa-atcccgtctctaacaaaaatacaaaaaattagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcagcagaattgcttgaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356391 211 + 51301725 aaagatggctgggcgcagtggctcacgcctgtaatcccaggactttgggaggctgaggtgggtggatcacctgaggttgggagatcgagaccagcctcaccaacatgcagaa-atcccatctctaacaaaaatacaaaaagttagctgggtgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=62645.000000 s hg38.chr19_GL949753v2_alt 335045 79 + 796479 cccgggaggcagaggttgcagtgagccaagattgcgccattgcactccagcctgggcaacaagagcgaaactccatctc s ponAbe2.chr19 56163569 79 + 60714840 cccaggaggtggaggttgcagtgagccaagattgcgccattgcactccagcctgggcaacatgagtgaaactccatctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909637 79 - 106955855 cccgggaggcagaagttgcagtgagccaagattgtgccgttgcactccagcctgggcaacaagagcgaaactccatctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55265752 79 + 59248254 cctgggaggcagaggttgtagtgagctgagatcgcaccattacactccagcctgggaaacgagagggaaactctgtctc i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47356602 79 + 51301725 cctgggaggcagaggttgtagtgagccgagattgcaccattacactccagcctgggcaacaagagcgaaactctgtccc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e rheMac3.chr19 60166749 5 + 64156825 I e panTro4.chr19 4210569 27 - 63644993 I a score=21120.000000 s hg38.chr19_GL949753v2_alt 335124 30 + 796479 -aaagaa--aaaaa---aaaGag--------------agagagagacaga s ponAbe2.chr19 56163648 32 + 60714840 -aaaaaaacaaaaa---aaaaaa--------------aaaaagagagaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909716 30 - 106955855 -aaaaaa--aaaaa---agagag--------------agagagagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166754 32 + 64156825 aaaaaag--agagac--agagag--------------agagagagacaga i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55265841 34 + 59248254 aaaacag--agagacagagagag--------------agagagagacaga i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47356681 48 + 51301725 aaaaaag--agagagagagagagagagagagagagacagagagagacaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45585622 0 + 49145316 C e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=32538.000000 s hg38.chr19_GL949753v2_alt 335154 35 + 796479 gagacacacagtgagagagaaagacag--------------aaagagag s ponAbe2.chr19 56163680 31 + 60714840 gacacacacacacagagagaaagac------------------agagag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909746 33 - 106955855 g--acacacagtgagagagaaagacag--------------aaagagag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166786 47 + 64156825 g--acacattgtgagagagaaagaaagagagagagaaagaaagagagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265875 33 + 59248254 g--acacattgtgagagagaaagaaag--------------agagagag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356729 33 + 51301725 g--acacattgtgagacagaaagacag--------------aaagagag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585622 33 + 49145316 g--agacacccagaaagagaaagacag--------------aaagagag i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I e panTro4.chr19 4210569 27 - 63644993 I a score=34037.000000 s hg38.chr19_GL949753v2_alt 335189 21 + 796479 acagggacagagacagacaga s panTro4.chr19 4210596 21 - 63644993 ACagagagagagagagagaga i panTro4.chr19 I 27 C 0 s ponAbe2.chr19 56163711 17 + 60714840 acagggacag----agacaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909779 21 - 106955855 acagggacagagatagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166833 21 + 64156825 acaaagacagagacagataga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265908 21 + 59248254 acaaagacagagacagaTAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356762 21 + 51301725 acaaggacagagacagataga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45585655 21 + 49145316 aaagggacagagaTGCACAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3673981 193 - 50890351 I a score=374220.000000 s hg38.chr19_GL949753v2_alt 335210 141 + 796479 gCAGGGAGAATGTGTCCCACGTGAAGAACAGGGAAAATCGGTCACAATGTTCACACAAGAAAGCAAAGATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTC s panTro4.chr19 4210617 140 - 63644993 gcagggagaATGTGTCCCACATAAAGAACAGAGAAAATCAGTCATCATGT-AAGAGAAGAAGTCAAAAATAAAGAGCACAGGTCTAGGAAACAGATCCTGGAAGGAAATTAAACTTGAGCACAAATAGAAAATTAAAGCTC i panTro4.chr19 C 0 I 12032 s ponAbe2.chr19 56163728 141 + 60714840 gCAGGGAGAATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATGTTCACACAACAAAGCAAAAATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCGCAAATAGAAAGTTAAAGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909800 141 - 106955855 gcagggaGAATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATGTTCACACAAGAAAGCAAAGATACAGAGTACAGCACTGGGAAGCAGATCCCAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166854 141 + 64156825 gcagggagaACGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATATAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGAGCACAAATAGAAAATTAAAGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55265929 141 + 59248254 GCAGGGAGAACGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATATAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGAGCACAAAGAGAAAATTAAAGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356783 141 + 51301725 gcagggagaATGTGTCCCACGTGAAGAACAGGGAAAATCAGTCATGATATTCACGCAAGAAAGCAAAGATAGAGAGTACAGCAATAGAAAGCAGATCACAGGAGGAAATTAAACCTGagcacaaatagaaaattaaagctT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3674174 138 - 50890351 GCAAGGAGAATGTGTCCCACGTGAAGAACAGAGAAAATCAGTCATCATGT---AACAAGAAAGCAAAAATAAAGAGCACAGGTCTAGGAAACAGATCCTGGAAGGAAATTAAACTTGAGCACAAATAGGAAATTAAAACTC i chlSab2.chr6 I 193 C 0 s calJac3.chr22 45585676 139 + 49145316 GCAGGGA-AATGTGTCCCATGTGAAGAAGAGGAAAAATCAGTCAGGATGTTCACACAAGAAAGCAAAGATACAGAGTCCAGCATTGGG-AGTAGATCCCAGGAGGAAATGAGACCTGAGTGCAAATAGAAAACTAAATCTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=38983.000000 s hg38.chr19_GL949753v2_alt 335351 16 + 796479 AGTACAAATTAAAATT s ponAbe2.chr19 56163869 16 + 60714840 AGTACAAATTAAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909941 16 - 106955855 AGTACAAATTAAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60166995 16 + 64156825 AGTACAAATTAAAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55266070 16 + 59248254 AGTACAAATTAAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47356924 16 + 51301725 AGTACAAATTAAAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3674312 16 - 50890351 AGTACAAATTAAAATT i chlSab2.chr6 C 0 I 15160 s calJac3.chr22 45585815 16 + 49145316 AGTGCCAATTAAAATT i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e panTro4.chr19 4210757 12032 - 63644993 I a score=535109.000000 s hg38.chr19_GL949753v2_alt 335367 326 + 796479 GGGTAGGCCAGTCAGGTA-CCACCCTCTTTGAACCAGCACAGAAACCTCCCAGCAGACCGAGCTGCAGCCCATCCCGGggttcataatgtggagtcaggagcctcaggtgggtctgaagcccctgtctctgagacttggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgtttttataaatgaggaaaata--atagagcacgctgtggagggtttgtaggagaatttaatgtgtccac-gtttgcctagaactaaattagcaactgccccatagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCtttc s ponAbe2.chr19 56163885 326 + 60714840 GGGTAGGCCAGCCAGGCACCCACCTTCTTTGAACCAGGACAGAAACCTCCCAGCAGACCAAGCTGCAGCCCATTCCGGggttcataatgtggagtcaggagcctcacgtgagtctgaagcccctgtctctgagac--ggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgttcttacaaatgaggaaaata--atagagcacgctgtggagggtttgcaggaaaatgtaacgtgtccatggtttgcctagaactaaattagcaactgtcccatagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCtttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102909957 326 - 106955855 GGGTAGGCCAGCCAGGAATCCACCCTCTTTGAACCAGGACAGAAACCTCCCAGCAGACCGAGCTGCAGCCCA-ACCGGggttcatgatgtggagtcaggagcctcccccgggtctgaagcccatgtctctgagacttggccgaccttggacaggttacttcatgtctcggtccatagt-----------ttctgtttttagaaatgaggaaaata--atagagcacgctgtggagggtttgtaggagaatttaatgtgtccat-gtttgcctagaactaaattagcaactgccccatagaaagagctgactgagttttTGCTGAGTTCTTAAAAATCtttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60167011 329 + 64156825 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACCAGGACAGAAACCTCCCAGCAGACTGAGCTGCAGTCCGTCCTGGggttcataatatggaatcaggagcctcacccgggtctgaagcccctgcctctgagacttggccgaccttggaccagttacttcatgtctcggtccatagttt---------ttttttttttttaaatgaggaaaata--atagagcacgctgtgaagggtttgtaggataatttaatgcgtccat-gtttgcttacaactaaattagcaactgccccatagaaaaagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55266086 331 + 59248254 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACAAGGACAGAAACCTCCCAGCAGACTGAGCTGCAGTCCGTCCTGGggttcataatatggaatcaggagcctcacccgggtctgaagcccctgcctctgagacttggccgaccttggacaggttacttcatgtcttggtccatagttt-------tgtttttttttttttaatgaggaaaata--atagagcatgctgtgaagggtttgtaggagaatttaatgtgtccat-gtttgcttacaactaaattagcaactgccccacagaaagagctGGCTGAGTTTTTGCTGAATTCTTAAAAATCTTTC i macFas5.chr19 C 0 I 2302 s papAnu2.chr19 47356940 329 + 51301725 GGGTAGGCCAGCCAGGCACCCACCCTCTTTGAACCAGGACAGAAATCTCCCAGCAGACTGAGCTGCAGTCCGTCCCGGGGTTCATAATATGGAATCAGGAGCCTCACCCGGATCTGAAGTCCCTGTCTCTGAGACTTGGCTGACCTTGGACAGGTTACTTCATGTCTTGGTCcatagttg---------tgtttttttttttaatgaggaaaata--atagagCACGCTGTGAAGGGTTTGTAGGAGAATTTAATGTGTCCAT-GTTTGCTTACAACTAAATTAGCAACTGCCCCATAGAAAGAGCTGGCTGAGTTTTTGCTGAATTCTtaaaaatctttc i papAnu2.chr19 C 0 I 1622 s calJac3.chr22 45585831 337 + 49145316 GGGAAGGCCAGCCAGGCACCCACCTTCTTTGAACCGGGACAGAAACCTTCCAGCACGGTGAGCTGCAGCCTGTCCaggggttcataacgtggagtcgggagcctcatgaggatctgaagcccccgcctctgagacatggctgatcttgaacaagttacttcgtgtcttggtccatagtttttttttttttctctttttttttaatgaggaaaataatatagggcacgctgtggagtgtttgtaggagaatttaatatgtcaat-gtttgcctagaactaaattagcaactgccccatagaaagagctggctgaatttttgctgaa---ttaAAAATCTTTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=1911.000000 s hg38.chr19_GL949753v2_alt 335693 1 + 796479 t s ponAbe2.chr19 56164211 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910283 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60167340 1 + 64156825 T i rheMac3.chr19 C 0 I 1726 s macFas5.chr19 55268719 1 + 59248254 t i macFas5.chr19 I 2302 C 0 s papAnu2.chr19 47358891 1 + 51301725 t i papAnu2.chr19 I 1622 C 0 s calJac3.chr22 45586168 1 + 49145316 T i calJac3.chr22 C 0 I 985 e canFam3.chr1 103003988 0 + 122678785 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=14592.000000 s hg38.chr19_GL949753v2_alt 335694 31 + 796479 tttcttttctttttttttttgacggagtctc s ponAbe2.chr19 56164212 25 + 60714840 tttc------ttttttttttgacggagtctc i ponAbe2.chr19 C 0 I 982 s nomLeu3.chr10 102910284 29 - 106955855 tttctttc--ttttgtttttgacggagtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55268720 31 + 59248254 tttgttttcttttgttttgagacagagtctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47358892 31 + 51301725 tttgttttgttctgttttgagacagagtctc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e rheMac3.chr19 60167341 1726 + 64156825 I e panTro4.chr19 4210757 12032 - 63644993 I a score=111388.000000 s hg38.chr19_GL949753v2_alt 335725 140 + 796479 gctctgtcgcccaggctggagtgcagtggcaccacctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctc-ccgagtagctgggactacaggtgcccgccaccacgcccagctaatttt s ponAbe2.chr19 56165219 140 + 60714840 gctctgtcgcccgggctggagtgcagcagcgcgatctcggctcactgcaagctccgcctcccgggttcctgccattctcctgcctcagcctc-ccgagtagctgggactacaggcgcccgccaccgcgcccggctaatttt i ponAbe2.chr19 I 982 C 0 s nomLeu3.chr10 102910313 141 - 106955855 gctctttcacccaggctggagtgcagtggtgtgatctcagctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctctccgagtagctgggaccacaggcgcccgccaccatgcccggctaatttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55268751 140 + 59248254 actctgtcgcccaggctggagtgcagtggcgtgatttcggctcactgcaagctctccctcccgggttcacgctcttctcctgcctcagcctc-ccgagtaactgggactacaggcgcccgccaccactcccggctaatgtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47358923 140 + 51301725 actctgtcgcccaggctggagtgcagtggcatgatttcggctcactgcaagctatccctcccgggttcacgctcttctcctgcctcagcctc-ccgagtaactgggactacaggcgtccgccagcactcccggctagtgtt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e rheMac3.chr19 60167341 1726 + 64156825 I e panTro4.chr19 4210757 12032 - 63644993 I a score=430.000000 s hg38.chr19_GL949753v2_alt 335865 3 + 796479 -ttt s ponAbe2.chr19 56165359 2 + 60714840 -tt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910454 2 - 106955855 -tt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169067 3 + 64156825 ttt- i rheMac3.chr19 I 1726 C 0 s macFas5.chr19 55268891 2 + 59248254 -tt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359063 2 + 51301725 -tt- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I e panTro4.chr19 4210757 12032 - 63644993 I a score=298541.000000 s hg38.chr19_GL949753v2_alt 335868 162 + 796479 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC s panTro4.chr19 59282818 162 + 63644993 gtatttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcccgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165361 162 + 60714840 gtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccacctcagcttcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGTTTTTGTTTTTTAAAGACAAACACAGATTAACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910456 158 - 106955855 gtatttttagtagagacggggtttcaccgcgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtactgggattacaggtgtgagccactgcgcctggccTGTTTTTGTTTTTTAAAG----ACACAGATTAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169070 162 + 64156825 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgccctcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggccTGCTTTTGTTTTTTAAAGACAAATACAGATGAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55268893 162 + 59248254 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggccTGCTTTTGTTTTTTAAAGACAAACACAGATTAACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359065 162 + 51301725 gtatttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcctgacctcgtgatccgcccgcctcagcctcccagagtgctgggattacaggcgtgagccaccgcgcctggcctgcttttgttttttaaagacaaacaCAGATGAACCC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I e chlSab2.chr6 3674328 15160 - 50890351 I a score=132395.000000 s hg38.chr19_GL949753v2_alt 336030 63 + 796479 AAATGAGATTCTGCCGCCTCCTAGTGGTACATAGGGTAATTTTCTGTGTCAATCAGTA-------------CATCT s panTro4.chr19 59282980 63 + 63644993 AAATGAGATTCTGCCTCCTCCTAGTGGTACACAGGGTAATTTTCTGTGTCAATCAGTA-------------CATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165523 63 + 60714840 AAATGAGATTCTGCTGCCTCCTAGTGGTGCATACGGTAATTTTCTGTGTCAATCAGTA-------------CATCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910614 63 - 106955855 AAATGAGATTCTGTCGCCTCCTAGTGGTGCATAGGGTAATTTTCTATGTCAATCAGTA-------------CACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169232 76 + 64156825 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAATCTGCATTTGGGAGAGTACCGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269055 76 + 59248254 AAATTAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAATCTGCATTTGGGAGAGTACCGTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359227 76 + 51301725 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGgtaattttctgtttcaatctGCGTTTGAGAGAGTACCGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065565 76 + 50890351 AAATGAGATTCTGTCACCTCCTAGTGCTGCATAGGGTAATTTTCTGTTTCAGTCTGCATTTGGGAGAGTACCATCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45586169 985 + 49145316 I a score=755279.000000 s hg38.chr19_GL949753v2_alt 336093 268 + 796479 GACCCTACAGGTAGGGTGGATACTCAGAAATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtatgtgcatgtctgtgtgtgtg----------cgtgtgtgtatgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCGGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT s panTro4.chr19 59283043 268 + 63644993 GACCCTACAGGTAGGGTGGATACTCAGAAATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCAtgtgagtgtatgtgcatgtctgtgtgtgtg----------cgtgtgtgtatgcatgtgtgtgAGAGCATGCATGCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCGGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165586 277 + 60714840 GA-CCTACAGGTAGGGAGGATACTCGGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtgtgtgcatgtctgtgtgtgtgtgtgtgtgtttgtgtgtgtatgcatgtgtgtgAGAGCATGCATTCTTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGGTACACTTGATTTGTCAGAAAACACTGACACCAATGTGAAGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910677 247 - 106955855 GACCGTACAGGTAGGGTGGATACTCGTATATGCCTCAACCAACAGCAGTCTCAGTGATTCCTTGGATTTCCTGGGGCgtgtgagtgtg------------------------------tgtgtgtgtatgcatgtgtgtgACAGCATGCATTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTACCTCATTCATTCCTGACACACGTGA-TTGTCAGAAAACACTGACAGCAATGTGAAGTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169308 260 + 64156825 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTACGCGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269131 260 + 59248254 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCATTCCTGTGCATGTATGCGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359303 260 + 51301725 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGaggcgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCCTTCCTGTGCATGTATGCGCAGATGTGGACCTGTAGGGTCAGCTGTCTGCCTTCACCCAGCCACACCTCCCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACACTGACACCAATGGGAAGTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065641 259 + 50890351 GACCCTACAGGTAGGGTGGATACTCAGATATGCCTCAACCAACAGCAGGCTCAGTGATTCCTTGGATTCCCTGAGGCgtgtgagtgtgtgtgcatgtctg------------------tgtgtgtgtacgcatgtgtgtgAGAGCATGCCTTCCTGTGCATGTATGTGCAGATGTGGACCTGTAGGGTCAGCTCTCTGCCTTCACCCAGCCACACCT-CCTCATTCATTCCTGATACACGTGATTTGTCAGAAAACAGTGACACCAACGGGAAGTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45587154 254 + 49145316 GACCCTACAGGTAGGGTGGATACTCGGATATGCCTCAACCAA-AGCAGGCTCAATGATTTCTTGG-TTTCCTG-GGCATGGGAGTGTGTGCACATCTCTC------------------CGCGTGTGTATGCATGTGTGTGAGAGCATGCATTCCTGTGCATGTATGTGCAGGTGTGAACTGGCAGGGTCAGCTCTCTGCCTTCACCCAGCTGAACCTCCTTCATTCATTCCTGATACACGTGCTTTGTCAGAAAACACTGACAACA---TGAAGTTTT i calJac3.chr22 I 985 I 567 e canFam3.chr1 103003988 0 + 122678785 I a score=135907.000000 s hg38.chr19_GL949753v2_alt 336361 63 + 796479 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATTCGTggtgatgggtgcgctgaggaat-t s panTro4.chr19 59283311 63 + 63644993 AAGATGAGCGAGTTCAGAATATCTAATGTATCGTATCCGTggtgatgggtgcactgaggaat-t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165863 62 + 60714840 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATCCGTggtgatgggtgcgctgaggaat-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910924 64 - 106955855 AAGATGAGCAAGTTCAGAATATCTAATGTATCGTATCCATggggatgggtgcgctgatgaatct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169568 64 + 64156825 AAGATGAGCAAATTCAGAATATCTaatgtataatatccgtggtagtgggtgcgctgatgaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55269391 64 + 59248254 AAGATGAGCAAATTCAGAATATCTAATGTATAAtatccgtggtagtgggtgcgctgatgaaatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47359563 64 + 51301725 AAGATGAGCAAATTCAGAATATCTAATGTATAATATCCGTGGTAGTGGGTGCGCTGATGAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065900 64 + 50890351 AAGATGAGCAAATTCAGAATATCTaatgtataatatccgtggtagtgggtgcgctgatgaatgt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I e calJac3.chr22 45587408 567 + 49145316 I a score=213120.000000 s hg38.chr19_GL949753v2_alt 336424 71 + 796479 gattgtgactgtcattgca----caatgtacgtgtacgacaaattatcacattttacaccttgaatacgtacaat s panTro4.chr19 59283374 71 + 63644993 gattgtgactatcatcgca----caatgtatgtgtatgacaaattatcacattttatgccttgaatatgtacaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165925 69 + 60714840 --ttgtggctatcattgca----caatgtatgcgtataacaaattattacattttacgccttgaatatgtacaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102910988 71 - 106955855 gattgtgactatcactgca----caatgtatgcgtgtaacaaattatcacattttacgccttgaatatgtacaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60169632 71 + 64156825 gattgtggctatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtacaat i rheMac3.chr19 C 0 I 310 s macFas5.chr19 55269455 71 + 59248254 gattgtggctatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtacaat i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47359627 75 + 51301725 GATTGTGGCTATCATTGCACAATCAATGTATGCGTATAACGAATTATCACATTTTACGCCTTGAATATGTACAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47065964 71 + 50890351 gattgtggctatcattgca----caatgtatgcgtatgacgaattatcacattttacgccttgaatatgtacaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45587975 71 + 49145316 gattgtggttatcattgca----caatgtatgcgtataacaaattatcacattttacgccttgaatatgtaccat i calJac3.chr22 I 567 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=66221.000000 s hg38.chr19_GL949753v2_alt 336495 22 + 796479 cctgatcaattaaattttaaaa s panTro4.chr19 59283445 22 + 63644993 cctgatcaattaaattttaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56165994 22 + 60714840 cctgatcaattaaattttaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911059 22 - 106955855 cctggtcaattaaattttaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170013 22 + 64156825 ccTGATCAATTAAATTTTAAAA i rheMac3.chr19 I 310 C 0 s macFas5.chr19 55269840 22 + 59248254 cctgatcaattaaattttaaaa i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47359702 22 + 51301725 CCTgatagattaaattttaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47066035 22 + 50890351 cctgatcgattaaattttaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588046 22 + 49145316 cttgatcaattaaatttaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 103003988 0 + 122678785 I a score=788476.000000 s hg38.chr19_GL949753v2_alt 336517 250 + 796479 agAAAACG--------CTGACACGTTTTC-GTAGGTCctgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtccgagagacctatgcacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgaTGCGTGGAGTAAAGCACAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG s panTro4.chr19 59283467 251 + 63644993 agAAAACG--------CTGACACCTTTTttataagtcctgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtccgagagacctatgcacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgatgcatggaGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166016 251 + 60714840 agAAAACG--------CTGACACCTCTTTTGTAGGTCctgcttccctcactcagctttgaacaactgtgaaggcagagactgggtccgagagacctatgtacccagg-accaggcctggggctgccagatgtgaggccttcaaaattatttattgaTGCACGGAGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCACAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911081 251 - 106955855 agAAAACG--------CTGACACCTCTTttgtaggtcgtgtttccctcactcagctttgaacaactgtgaaggcagagagtgggtctgagagacctatgcacccagg-accaggcctggggctgccagatgcgaggccttcaaaattatttattggtgcatggaGTAAAGCATAACCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGCGCAGTCTCAAAGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170035 251 + 64156825 AGAAAACG--------CTGACACCTCCTTTGTAGGTCctgtttcccacactcagctttgaacaactgtgaaggcagagcctgggtccgagagacctatgcacccagg-accaggcctgaggttgccagatgtgaggtattcaaaattatttattgaTGCACAGAGTAAAGCATGATCCAGAGAACGG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55269862 251 + 59248254 aGAAAACG--------CTGACACCTCCTTTGTAAGTCCTGTTTCCCACACTCAGCTTTGAACAACTGTGAAGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAGGTATTCAAAATTATTTATTGATGCACAGAGTAAAGCATGATCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGCATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47359724 251 + 51301725 agaaaacg--------cTGACACCTCCTTTGTAGGTTCTGTTTCCCACACTCAGCTTTGAACAACTGTGAAGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAggtattcaaaattatttattgatgcACAGAGTAAAGCATGATCCAGAGAACTG-GGCTTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGATAACTCTTGACTTCTAGGAAGGTCTTTAAGG i papAnu2.chr19 C 0 M 398 s chlSab2.chr6 47066057 251 + 50890351 agaaaaCG--------CTGACACCTCCTTTGTAGGTCCTGTTTCCCACACTCAGCTTTGAACAACTGTGACGGCAGAGCCTGGGTCCGAGAGACCTATGCACCCAGG-ACCAGGCCTGAGGTTGCCAGATGTGAGGTATTCAGAATTATTTATTGATGCACAGAGTAAAGCATGATCCAGAGAACTG-GGCGTGGCTCTCAGCTGTGTGTGTATAGTGCAGTCTCAAGGCTAGCTCTTGACTTCTAGGAAGGTCTTTAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588068 258 + 49145316 agAAAATGCTTTTTTTCTGACACCTCCTTTGTAGGTtctgtttcctttactcagctctgaacaactgtgaaggcagaggctgggtccaggagacctgtgcacccagg-accaggaacggggctgccagatgtgaggtcttcaaaataatttattgaTGC-CAGAGGAGAGCGTGATGCAGAGAATCG-GGCATAGCTGCCAGCTGTGTGTGTATAGCGCAGTCTCAAGGTTATCACTTGACTTCTGGGAAGGTTTTTGGGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19756805 237 - 122678785 AGAAAACA--------CTGATGCATTCTTT----GTCTTGTTTTCTGCTCAAAACTCTGA------------GCAGAGACTGGGACCGAGTTACCTGTGTACTCTGGTTCCTTGCACAGGACTGCTGCAGAGTGGGCCTGTGAAAACTTTTATTGATGAACAAAGAGAAGCATAGTGCAGGAAACAGTGTCTCAGATATTAGCTGCGCAAGTATAGTCCCAGTTCAAGATCAACTAACCAAACTCTGGAAAGTCTTTAGAG i canFam3.chr1 I 10348 C 0 a score=616877.000000 s hg38.chr19_GL949753v2_alt 336767 213 + 796479 TCAGCAGGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCGGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTTT-AGAACAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT s panTro4.chr19 59283718 340 + 63644993 TCAGCAGGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAAGTGGCATCACTGCTCAGGAAATCGGCTGATTGGCTATAGCTGGGTCTCTGGAAATAGCCTCATGGCTGTAGCTGGGTCTCTAGAATAGGCAGGTGACTTTAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCTGGGTCTCT-AGAATAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166267 213 + 60714840 TCAGCAGGGCAGATAATTACAGCAAAGTATCTGGGATCA-CTGGAGGTTCACAGCAGACACCTAAGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCGGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGTCTCT-AGAACAGGCAGGTGACTT--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911332 213 - 106955855 TCTGCAGGGCAGATAATTACAGCAAAGTCTCTGAGGTCA-CTGGAGGTTCACAGCAGACACCTGGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCTGCTGAT--------------------------------TGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGAGGGTGACTA--------------------------------TAGCTGGGTCTCTGGAAACAGTCAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170287 245 + 64156825 TCAACAAGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGCGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCAGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAGCTGGGTCTCTGGAAACAGTCAGGTAAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55270114 245 + 59248254 TCAACAAGGCAGATAATTACAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGCGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCAGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAGCTGGGTCTCTGGAAACAGTCAGGTAAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 3778054 239 - 51301725 TCAGAAGAGCAGATCATTCCAACAAAGTCTCTGGGGTCA-TTGGAGATTCACAGGAGACACCTAGGACCAGCTGGGGGACTGCATCACTGCTCATCAGATCTGCTGGGTGTTTGTAGCCGGGTCTCTGGAGACAAC------------------------------------------------------------------------------------------------------CTGTGGCTGGGTTTCTGAAAATAGCCAGGTGACTA--------------------------------TAGTTGGATCTCTGAAAACAGTCAGGTGAATAAAGCTGGGGCTCTAGAAACAGCCAGACAACTGCAGCT i papAnu2.chr19 n 0 I 9021 s chlSab2.chr6 47066308 241 + 50890351 TTAACAGGGCAGATAATTATAGCAAAGTCTCTGGGGTCA-TTGGAGGTTCACAGCAGACACCTAGGACAAGCTTGGAGGTGGCATCACTGCTCAGGAAATCAGCTGATTGGCTGTAGCGGGGTCTCTGGAAATAGCCTGACGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAACAGGCAGGTGACTT--------------------------------CAACTGGGTCTCTGGAAA----CAGGTGAATAAAGCTGGGTCTCTAGAAACAGCCAGGGAACTGTAGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588326 276 + 49145316 TCAGCAGGGAAGATAATTA-AGCAAAGTCTCTGGGGTCA-CTGGAGGTTCACCGGAGACACCTGGGACCAGTTTGGGGTCTGCATCACTACTCAGGAAATCAGCTGACTGGAGGTAGCTGGGTCTCTGGAAATAGCCTGATGG-----------------------------------------------------------------------------------------------CTGTAGCTGGGCCTCT-AGAAAAGGCAGGTGACTTTAGCTGGGTCTCTAGAAACAGCCAGGTAACTGTAGCTGGGTCTCTGGAAACAGTCAGGTGAGTAAAGCTGGGTCTCTAGAAACAGCCAGGTAACTGTACCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19757042 159 - 122678785 CCAGCTGAGTGGAAAATTAAAACGGAGCCTCTAGGGGCAGTTGGGGATACACAGGACACAACTGGAATCATCTGTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCA------------AGACCA--------------------------------------------TAGCTGGGTCTCTGGAAACAGCCAAGTGACTATAGCTGGGTCTCTGGAAACTACTAGGAATCTGTAGCT i canFam3.chr1 C 0 C 0 a score=5784362.000000 s hg38.chr19_GL949753v2_alt 336980 1815 + 796479 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCGATTGTAGAAGGGACCACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTCCAGGACAGCTGCCTGGCTG-GCTTTCTAGATGAAGAGGAATCCAAC-AGGAAGCCTTCCAAATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTACCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACGTGATGGACTCGGCCATGGGCTTTGTGGACTGTGGGGACACAGCCCGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGGGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------CGAGGGGCTGTGGGGAGGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcct-aaattgcatccgtgtgaagagccctcccacagggtattggggttggtttacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacatggtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggctgtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-ggggaagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcggatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcctaacccaaggaactgaga---tttttttaagctgc--taaatttggggtactttAATAACTAGTAGGAAGGCTCACCGAGGTGTCTGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGGAGGATGTCGCAAGGCAAATCTGCCTGAGACCCCCACCCCCAGCTTCCGATGAC-ATCCTGCACCCAATGTATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCACCCCCCACATTGCATCTGGATTGGCACCAAGTCCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTAAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTAAGGACAGTC-GGGGTGTGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACCCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATggaggcagaagaggaccaggaggaggagacagaagaggaagaCCACTGAGACCCCGATGAGAATATACAGATGCTCAGCTTTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGATTTCAGCAGTGTGcatttattgagcacctactgtataccacacacacgtcacgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagtacagggatcgttatccccttcttccaccaccggggtcctgagtgctggagt----cctctgcacagggacacagac--tgccattggc s panTro4.chr19 59284058 1796 + 63644993 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCGATTGTAGAAGGGACCACCTGGCTAATGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTGCAGGACAGCTGCCTGGCTG-GCTTTCTAGATGAAGAGGAATCCAAA-AGGAAGCCTTCCAAATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTACCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACGTGATGGACTCGGCCATGGGCTTTGTGGACCGTGGGGACACAGCCCGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGGGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------CGAGGGGCTGTGGGGAGGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcct-aaattgcatccatgtgaagagccctcccac-gggtattggggttggtttacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacatggtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gggaaagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcccaaccctgggaactgaga---tttttttaagctgc--taaatttggggtactttAATAACTAGTAGGAAGGCTCACCGAGCTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTTAGGAAGTCCATTGACTGTGGCCTTGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CCCCCAGCTTCCGATGAC-ATCCTGCACC-----------------TTCTAGAATGTTCCCAAAGATTCTTCCCACCGCCCCCCACATTGCATCTGGATTGGCACCAAGTCCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCTCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGTCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGCACTGGGTGGAGGTCCGGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----CTTTCTTCCTAGCCTCTCCTGACACCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATGGAGGCAGAAGAGGACCAGGAGGAGGAGACAGAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCTTTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGATTTCAGCAGTGCGcatttattgagcacctactgtataccacacacatttcatgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccaccggggtcctgagtgctggagt----cctctgcacagtgacacagac--ggccattggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56166480 1809 + 60714840 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAGCTGCTCAATTGTAGAAGGGACCACCTGGCTAATGAACCTTCTGGATGCTGGTTAGAAACCTCCAGTTTCCAGCTCTTGTCTCCAGGACAGCTGCCTGGCTG-GCTTTCTAGACGAAGATGAGCCCAAG-GGGAAGCCTTCCAAATGGTTGCTTCAGGCTTTTCCTAGAGTGACTTTCTATCC--TCAGGTGCAGAGGCCAGGTGGGTATGGGGTCAGTGTCTGGCAACGGCTGCATACATGCTGGACTCAGCCACGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCTGTGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCAGGGCCTAAGAGAGAGAGACCCGGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGGAGGGAGGGCtg--tggtggcca-tcttcatg-ggccctgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattggggttggtttacatga-caatgaac-aaggcagaagggaagactcctgacttccaagctgagccaaaagacattgtgcttctgtcccctccctgccacccatccttggatccctccctctgggggaagccggtggtgtggagtggcccctgtgagaggaacagaggtttcctgccca-cagccggggggagtgagcgtcttggacatggatcctccaagcccacgggagccttcagatgcacacagccctgg--------------gagacctctcaacggcaacctcaggacaggccgtgagccggaaccgcccagctgagccactcctgaattcccaaccctaggaactgaga---ttttttaaagctgc--taaatttggggtactttAATAACTAGTAGGGAGGCTCACCGAGGTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTCCACTGACTGTGGTCTTGTCTTGGGGAGA-----AAGTACAGGGTCGGTTTTCTGGGGAGGATGTCACAAGGCAAGTCTGCCTGAGACCCCC-CC----GCTTCCGATGAC-ATCCTGCACCCAATCTATAATACAACCTTCTAGAATGTT-CCAAAGAATCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCACCAAGTTCCCACTTCCCCATCTCACACCTGTCCCTCCT-CCTTCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGTGGCCGAGGACCAGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTTGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----TCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGACGGAGGAAGAAGAGGACC---AGGAGGAGACAGAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGAGAAGCAGGTGCATCTAAGAAAGACAGAAACAGATTTTCAGCAGTGTGcatttattgagcacctactgtataccacacacacgtcacgtgcgtttcatagacttactaatatataaaatatcttaggtaaataat----------------------------------------agtcctgcagcacagggatcattatccccttcttccaccaccggggtcctgagtgctggggt----cctctgcacagggacacagcc--ggccattggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102911545 1823 - 106955855 GGGTCTCTGGAAATAACTGAGAAACAGTCTGTCCAAGGAACTGCTCAATTGTAGAAGGGACCACCTGGCTAAAGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCT-CAGGACAGCTGCCTGGCTG-GCTTTCCAGACGAGGATGAGCCCAAG-GGGAAGCCTTCCACATGGCTGCTTCAGGCTTTTCCTAGAGTGACTTTCTATCC--GCAGGTGCAGAGGCCAGGT--------GCTCAGTGTCTGGCAATGGCTGCATACATGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGGCACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAATGGTCCAGCTGAGCATACGTCACCTCCTGCGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAAGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGGATGGAGGGCtg--tggcggcca-tctccacg-ggccctgaggaccc--tctcctgaaattgcatccatgtgaagagccctcccacagggtattggggttggtttaggtga-cagtgaac-aaggcagaagggaagactcctgacttccaagccgagccaaaagacatcgtgtttctgtcccctccccgccacccatccttggatccctccctctgggggaagccggcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gggggagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctgggtgacctctcgacagcgacctctcgacggcgacctcaggacaggccgtgagctggaaccgcccagctgagccactcctgaattcccaaccctaggaactgagat-ttttttttaagctgc--taaatttggggtactttaataaccagtaggaaGGCTCACCGAGGTGTCCGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGACGTCCATTGACTGTGGCCTCGTCTTGGGGAGA-----AAATACATGGTCAGTTTTCTGGGGAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CC---AGCTTCCGATGAC-ATCCTGCACCCAATCTATAATACAACCTTCTAGAATGTTCCCAAAGATTCTTCCCACCGCCCCCCACATTGCAACTGGATTGGCACCAAGTGCCCACTTCCCCATCCCAGGCGTGTCCCTCCT-TCTCCCCCTTTACCTGCTGTCCTCTCTAGCACATCAACAGTCAGGTGGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGCGGCCGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTGGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTGTGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTT-CCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTTATCTGATTCTGGCGATggaggaagaagaggaccaggaggaggagacagaggaggaagaCCACTGAGACCCCGATGAGAATATAGAGATGCTCAGCTTTCAGGTCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGATTTTCAGCAGTGTGcatttattgagcacctactgtataccacacac--gtcgtgtgcgtgtcatagacttactaatatataaaatctctcaggtaaacaat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaCCACGGGGGTCCTGAGTGCTGCAGTGTCCCCTCTGCACAGGGACACAGCCGGGGCCACTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60170532 1886 + 64156825 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGATGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCTCCAGGTCAGCTGCCTGTCTG-GCTTTCTAGACGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCACTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGTAGAGGTCAGGTGGGCCGGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATACATCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGCGAGG-----------------TGAGGGGCTGTGGGACTGGAGGGCtg--tggcggcca-tctccatg-ggccccgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctacgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgaggc-aaagacatcgcgcttccg-cccctccccaacacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgtcca-cagcc-gtgggagtgagcgtcttggacgtggatcctcc-agcccacgggagccttcagatgcacacagccctca--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgagccactcctgaattcccagtccaaggaactgaga---tttttttaagctgc--tgaatgtggggaacttgAATAACTAGGAGAAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTCTCAGGAAGTCCATTGATTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGGC-ATCCTGCACCCAATCTATAATATGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCTCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTCACCTTCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCCGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGCCCCTGAGGACAGTC-GGGGTATGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCGGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCAGTGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGTTTTCAGCAGTGTGcatttattgagtgcctactgtatacc--acacatgtcacgtgcgtgtcatagacttactaatatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccactggggtcctgagtgctgaggc----cctctgcacagggacacagccgaggccattggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55270359 1833 + 59248254 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGATGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGATGCTGGTTAGAAATCTCCAGTCTCCAGCTCTTGTCTCCAGGTCAGCTGCCTGGCTG-GCTTTCTAGACGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCGCTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGCAGAGGCCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGACACAGCCTGGGCTGTCCTCCATGTGAGGGCCCAGTGGTCCAGCTGAGCATACGTCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGCTGTGGGACTGGAGGGCtg--tggcggcca-tctccatg-ggccctgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctatgtga-caatgaac-aaggcagaagggaagactcctgacttccaagctgaggcaaaagacatcgcgcttccg-cccctccccaacacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgccca-cagcc-gtgggagtgagcgtcttggacgtagagcctcc-agcccacaagagccttcagatggacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgaaccactcctgaattcccagtccaaggaactgaga---tttttttaagctgc--taaatgtggggaacttgAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTGGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAT-ATCCTGCACCCAATCGATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-AGGGTACAAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCGGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGAAAGACAGAAACAGGTGTTCAGCAGTGTGcatttattgagcaccgactgtatacc--acacatgtcacgtgcgtgtcatagacttactaatatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccaccggagtcctgagtgctggggc----cctctgcacagggacacagccgaggccattggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47360373 1834 + 51301725 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAAGAGCTGCTCAATTGTAGAAGGGACTACCTGGCTAACGAAACTTCTGGATGCTGGTTAGAAACCTCCAGTCTCCAGCTCATGTCTCAGGTCGAGCTGCCTGGCTGAGCTTTCTGGATGAAGATGAGTCCAAGAGAGAAGCCTTCCAAATGGCCGCTTCAGCCTTTTCCTAGAGTGACTTTATATCC--TCAGGTGCAGAGGCCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATATGTGCTGGACTCAGCCATGGGCTCTGTGGACCGTGGGGACACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATATGTCACCTCCTGGGAACTCCCTGCAGCCGGggcctgagagagagagacccagggTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGACGGGCTGTGGGACTGGAGGGCTG--TGGCAGCCA-TCTCCATG-GGCCCCAAGGACCC--TCTCCTGAAATTGCATCCTTGTGAAGAGCCCTCCCACAGGGTATTAGGGTTGGTCTATGTGA-CAATGAAC-AAGGCAGAAGGGAAGACTCCTGACTTCCAAGTTGAGGCAAAAGACATCGTGCTTCCG-CCCCTCCCCGCCACCCATCCTTGGATCCCTCCCTCTGGGGGAATCC-GCGGTGTGGAGAGGCCCCTGTGAGAGGAACAGAGGTTTCCTGCCCA-CAGCC-GTGGGAGTGAGCATCTTGGACGTGGATCCTCC-AGCCCACGGGAGCCTTCAGATGCACACAGCCCTGG--------------GCGACCTCTCGACAGCAACCTCAGGACAGACCGTGAGCCGGAACCGCCCTGCTGAACCACTCCTGAATTCCCAGTCCAAGGAACTGAGA---tttttttAAGCTTC--TAAATGTGGGGAACTTGAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTTCTCAGGAAGTCCATTGATTGTAGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAC-ATCCTGCACCCAATCAATAATATGACTTTCTAGAATGTTCCCAAAGAttcttccccccgccccccacattGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGcctgtccctcct-cctctccctttacCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCGGGcctgagaggaaaaataaaagtgaaccTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTACGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACC---AGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTAAGACAGACAGAAACAGGTTTTCAGCAGtgtgcatttattgagcacctactgtataccaTACACATGTCACATGCGTGTCATAAACTTACTAATATATAAAATCTCTCAGGTAAATAAT----------------------------------------AGTCCTGCAGCACAGGGATTGTTATCCCCTTCTTCCACCACCGGAGTCCTGAGTGCTGGGGC----TCTCTGCACAGGGACATAGCCGGGGCCATTGGC i papAnu2.chr19 M 398 C 0 s chlSab2.chr6 47066549 1832 + 50890351 GGGTCTCTGGAATCAACTGAGAAA----CTGTCCAAGGAGCTGCTCAATTGTAGAAGGGACTACCTGGCTAACGAACCTTCTGGAAGCTGGTTAGAAACCTCCAGTCTCCAGCTCTTGTCTCCAGGTCGGCTGCCTGGCTG-GCTTTCTAGATGAAGATGAGTCCAAG-GGGAAGCCTTCCAAATGGCCACTTCAGGCTTCTCCTAGAGTGACTTTATATCC--TCAGGTGTAGAGGTCAGGTGGGCCTGGGGTCAGTGTCTGGCAACAGCTGCATACGTGCTGGACTCAGCCATGGGCTCTGTGGACTGTGGGGAAACAGCCTGGGCTGTCCTCCGTGTGAGGGCCCAGTGGTCCAGCTGCGCATACGTCACCTCCTGGGAACTCCCTGCAGCCGGGGCCTGGGAGAGAGAGACCCAGGGTGAGGGAGTGCCTGGTGGAGGGTGAGG-----------------TGAGGGGTTGTGGGGCTGGAGGGCtg--tggcggcca-tctccatg-ggccccgaggaccc--tctcctgaaattgcatccgtgtgaagagccctcccacagggtattagggttggtctacgtga-caatgaac-aaggcagaagggaaggctcctgacttcctagttgaggcaaaagacattgtgcttccg-cccctccccgccacccatccttggatccctccctctgggggaatcc-gcggtgtggagaggcccctgtgagaggaacagaggtttcctgtcca-cagcc-gtgggagtgagcgtcttggacgtggatcctcc-agcccacgggaaccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcaggacaggccatgagccagaaccgcccagctgaaccactcctgaattcctgacccaaggagctgaga--ttttttttaagctgc--taaatgtggggaacttgAATAACTAGGAGGAAGGCTCACCGAGGTGTCCGTCTCTCTGTCCTCCTCAGGAAGTCCATTGATTGTGGC------------------------------------------------------CTTCTCAGGAAGTCCATTGACTGTGGCCTTGTCTGGGGGAGA-----AAATACATGGCCAGTTTTCTGGGAAGGATGTCACAAGGCAAATCTGCCTGAGACCCCC-CA----GCTTCAGTTGAC-ATCCTGCACCCAATCGATAATACGACCTTCTAGAATGTTCCCAAAGATTCTTCCCCCCGCCCCCCACATTGCATCTGGATTGGCAAGAAGTTCCCACTTCCCCATCCCAGGCCTGTCCCTCCT-CCTCCCCCTTTACCTGCTGTCCTCTCTAGAACATCAACAGCCAGGTCAGGCCTGAGAGGAAAAATAAAAGTGAACCTCAGGGG-CAGCCTGGGGGCAGAGGACTGGGTGGAGGTCCAGGAGTCATTCCCAGGGGCCTCACCTCTGCTGTAGCTTCTGCTCCTCGTCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTACGAATTAAGGAGA----CCTTCTTCCTAGCCTCTCCTGACAGCTTCCCCAGGTCACTCCACCCTGCCCCTGAGACCTACCCTGCTTCATCTGATTCTGGCGATGGAGGAAAAAGAGGACCAGAAGGAGGAGACAAAAGAGGAAGACCACTGAGACCCCGATGAGAATATAAAGATGCTCAGCACTCAGGCCTTGGGAAGCAGGTGCATCTA----AGACAGAAACAGGTTTTCAGCAGTGTGcatttattgagcacctactgtataccacacacatgtcacgtgcgtgtcataaacttactaacatataaaatctctcaggtaaataat----------------------------------------agtcctgcagcacagggatcgttatccccttcttccaccactggggtcctgagtgctggggt----cctctgcacagggacacagctgaggccattggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45588602 1837 + 49145316 GGGTCTCTGGAATCAGCTGAGAGACAGTCTGTCCAAGGAGCTGCTCAATTGCAGAAGGGACCAGCTGGCTAATGAGCCTTCCGCATGCCGGTTAGAAACCTCCAGGCTCCAGCTCTTGTCTCCAG---ATCTGCCTGGGAG-CCTTTCCAGACGAGGATGAGTCCAAG-CCGAAGCCTTCCAAAGGGCTGCTTCAGGCTTTTCCTAGAGT----------CT--CCAGGTGTAGAGGCCAGGTGGCCCTGGGGTCAGCGTTTGACAATGGCTGCGTACATGCTGGCCTCGGCCAAGGGCTCTGTGGAC---------ACAGCCTGGGCTGTCCTGCGTGTGAGGGCCCCGTGGTCCAGCTGAGCATATGTCACCTCCTGGGGGCCCTCTGCAGTCGGGGCCTGGGAGAGAGAGAGCCAGGGTGACGGAGAGGCTGGTGGAGGGTGAGGATGTGGGGCTGTGGGGATGGAGGGCTGTGGGGATGGAGGGCtg--tggttgcca-tctccatg-ggccccgaggaccc--actcctgaaaatgcatccgtgtgaagagcccacccacagggaatgagggttgctctatgtga-cagtgaac-aaggcagaagtgaagactcctaacttccaagctgaggcaaaagacattgtgcttctg--ccctcccca-----cacctttgggtccctccctctgggggaatctggcagtgtggagaggcccctgtgagaggaacagaggcctctg--ctg-cagct-gtgggagtgagcgtctcggttgtggagcctcc-agcccacaggacccttcagatgcacacagccctgg--------------gcgacctctcgacagcaacctcagcacagactgtgagctggaactgcccagctgagccactcctgaattcctgacccaaggaactgaga--ctttttttaagctgc--taaatttgggttactttCATAACTAGCGGGAAGGCTCACCGAGGTGTTGGTCTCTCTGTC---------------------------------------------------------------------------------CTTCTCAGGAAGTGCATCAACTGTGGCCATGTCTGGGGGACA-----AGACACA-GGTCATTTTCCTGGGGAGGATGTCACAGGGCAAATCTGCCTGAGACCCC--CA----GCTTCAGATGTC-ATCCTGCACCCAATCTATAATACGGCCTTCTAGAATGTTCCTGAAGATTCTTCCCCCCTCCCCCCGCATTGCATCTGGATTGGCACCAAGTTCCCACTTCCCTGTCCCAGGCCTGTCCCTCCT-CCTCCCTCTTTACCTGCTTTTCTCTCTAGAACATCAACAGCCATGTTGGGCCTGAAAGGAAAAATAAAAATGAACATTAGGGG-CAGCCTGGCGGCAGAGGACTGGATGGATGTCCAGGACTCATTCCCGGGGGCCTCACCTCTGCTGTGGCTTCTCCTCCTCATCCTTGCTTCTGGGGGGCCCTGAGGACAGTC-GGGGTCTGAATTAAGGAGA----CCTTCTTCCTAGCATCTCCTGACAGCTTCCCCAAGCCTCTCCACCCTGCCTCTGACACCTACCCTGCTTTATCTGATTCTGGCGATGGAGGAAGAAGAGGGCCAGGAGGAAGAGACAAAGGAGGAAGACCACTGAGACCACGATGAGAATATAGAGATGCTCAGCTTTCAGGCCTTGGGGAGCAGGGGCATCTAAGAAAGACAGAAACAGGTTTTCAGCAGTGTGCACTTACTGAGCACCTACTGCATACCACACACATATCATGTGTGTGTCACAGACGTACTAATATATCAGATCTCTCAGATAAATAATCGTCCCACAGCACAGGGATTAAAATCTCTCAGGGGGAaacagtcctgcagcacagggatcattatccgcttcttccaccactggggtcctgagtgctggggt----cctctgcacagggacacagcc--agccactggc i calJac3.chr22 C 0 C 0 s canFam3.chr1 19757201 1651 - 122678785 GGGTCTTTGGAAATAAATGCTACAGGCTCTCTCCAAGGATCTAGTTGATGTCAGGAGGGACCACATGGCTAATGAATCTTCTAAATGTTGACTAGAAGCCTCCTGACACTGGC-CTTGCCTCCAGGATCTCTGACTGTATG-GCTTTCCAGAAAGGGATGATTCCATT-GGGAAGTCCTCCAAATGGCCACTTCATGTTTTTGCAGGAATGACGCCCCATGCGTCTAGGAGCAGAGGCGAGGTGGGCATGGAGTCAGTGTCTGGCAAGGGCTGCATATGTACTGGACTCAGCCATGGGCTCCACAGACTGTGGGGATGTGGCTGGAGCTGTCCTCTGTGTGAGGATGTGGTGGTCCAGCTGAGCATATGTCACGTCCTGGGGGCCTCCTGCAGTAGGGGTCTGAGAGAGAGAGACCCA-GGTGAG-------------------AAGG-----------------TAGGGGACTGTGGGAAGGGAAGACTAACtagtagccagcctccatgtgacccccatgatcccacctcctgggat--cacccctgtttagctccttcccacttaggatcagggctagactgtgtgaccagtaggctatggcagaatgagggcatgcca---------------caaaagataatgtggcttcggcccctccct----------ctctgtgacctctctctggggagctgc-----catgGAGAAGCCCCAGTGGGGGggaacggagggccctgccagtcagtc-aggggtgc---catactggaagtggatcttcc-agccctaggtgagct---gatg----cggccctgg--------------tccacatcttcacagccacctccaaaaagaccctgagccagaactaccccgctaacctggttccaaattgctgagcaaacaaatggagataactttgttaagcctcatttatcatgcggcaa-tggataaTGCACACAAGGACTTACGGAGATGCTCCCTTCCCTGTC---------------------------------------------------------------------------------CCTCTCAGGAAGTCTGCTGATTGTAGCCAGATCTGGAGGGGAGAGAGAGACAAGGGGTCAGGTCTCTGGGGTGGGTCTCGGAAGGCAAATTTGCCCAAAAATTCA-TA----GCTTCAGCTTTCAATATTATACTCCATCTGGAACA-----TCCTAGAATGTTTCCAAACATTC-------------------------------------------------CCCTCTCCCAGGCCTGTCCCTCCTCCCTGGCCTTTCACCTGGTGTCCTCTCTCGGATGTCAACAGCCGGGCTGACCCTGGAGGGAAAG--AACAGTGAGTCCTGGGGGCCCGCGTGGAGGCAGAGGACTGGGAGAAGGTCCGGG-GTCAGTCTCGGGGACCTTACCTCTCCTGGGTCCTCTGCTCCTCACCTTTGCTGCTGGAGGGCCCTGAGGACAATCAGGGGTATGAATTAAAAAGAAAGGTCTTCTTCCCAA------------------------CACCCCGACCCTCCCCTGAGACCTACTGTGTTTTTTCTGTTGCTGACGATGGATGAAGATGTGGGCCAGCAGGAGGACACAAAGGAACAAGGCCACAGAGACCCCAATAAGAATATAAACATGCTCTGTTGACAGGCCTGGGGGAACAGG----------GAAGATGGAACCAGATTATCAGGA-CGTGCATTTATTGACCACCTACTGCATTAC------------CGGGCATGT-----ACACACCTAGGTATAAAATCTCTGAAGTGCATAAT----------------------------------------AGTCCTATGACATGAGAAGCATTA--------TTCCAAAACCAGGGTCCTGAGTGCTGAAGT----CCTCTGTCCCGG-----------GGGCACTGGC i canFam3.chr1 C 0 C 0 a score=904124.000000 s hg38.chr19_GL949753v2_alt 338795 375 + 796479 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGCTTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCACATCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GACTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagcatgagagtcacacatagctattgatatttaaatttatccaaagttgaatggcatg s panTro4.chr19 59285854 373 + 63644993 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGCTTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCACGTCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GACTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagcatgag--tcacacatagctattgatatttaaatttatccaaagttgaatggcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56168289 375 + 60714840 agagcaggaatctgatcaaccccaaagcctgacctctttctccttccccaAGAGGCACACACCAGGCTCATGCTCCACGGCCCCCATCACTCACGCTCATTGTGACTGTTGTCCGACGGCCTCTGCATGGGTCCTGGGAGGGAAGATT--------CAGAAGGAGGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCAAGTCCACTGTGGGGATCTCCCTTCACTCCCCAGGACCCT---GGCTGCTCCCTCTAGACcagca--ccgaccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacatagctattgatatttaaatttatccgaagttgaatggcatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60172418 373 + 64156825 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCACTCCTTCTAGACcaaca--ccgtccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctactgatatttaaatttatccaaagctgaatggtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55272192 373 + 59248254 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACACTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCAGGACCCT---GACCGCTCCTTCTAGACcaaca--caatccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctactgatatttaaatttatccaaagttgaatggtgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47362207 375 + 51301725 AGAGTGGGAATCTGACCAACCCCAAAGcccaacctctttctccttccccaggAGGCATACACCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------CAGAAGGAAGAGGAGTTAGAGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTCCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCGCTCCTTCTAGACCAGCA--CTGACCAGCAGAGtcttctgtgatgatggaaactTTCTACATC-TACTGTCCAGTATGAGAGTCACACGTAGCTattgatatttaaatttattcaaagTTGAATGGTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47068381 373 + 50890351 agagtgggaatctgaccaaccccaaagcccaacctctttctccttccccaGGAGGCACACGCCAGGCTCACGCTCCATAGTCCCCATCACTCACGCTCATTGTGACTGTTGTCTGATGGCCTCTGCGTGGGTCCTGGGAGGGAGGAAT--------TAGAAGGAAGTGGAGTT--AGTCCTGAGCTGGACAGAGAAGGCTCTGAGTCCTCCCATGTTCACTGTGGGGATCTCTCTTCACTCCCCACGACCCT---GACCGCTCCTTCTAGACcaaca--ccgtccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagtatgagagtcacacgtagctattgatatttaaatttattcaaagttgaatggtgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45590439 361 + 49145316 agaacgggaatctgaccaaccccaaagcctgacctctttctccttgcacAAGAGGGACACACCAGGCTCATGCCGCACAGTCCCCATCACTCACGCTCATTGTTACAGTTGTCTGAGGGCCTCGGCGTGGGTCCTGGGAGGGAGAAAT--------CAGAAAGAGGTGGAGGCAGAGCCCTGAGCTGGACAGAAAAGGTTCTGAGTCCTCCCACGACCCCTGCAGGAATCTCCCTTCATTCCCCAGGACCCT---GACCGCTCCTTCTAGACGAGCACCccgcccagcagagtcttctgtgatgatggaaactttctacatc-tactgtccagaatgaaagccacacgttgctgttgatattta----------------aaTGGCCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19758852 314 - 122678785 AGAGCTGGACGATGACCAACACCAGAGTCCA--TTCCTTCCCCTTCCCCAAGGAGCACAC--------------------------TCACTCACCGAGACTGCTACTGTCATCCCAGGGCACCGGTGAGACTTCTAGGAAGGAGTAATGAAGCACACAGTCAGAAG----GTCAGAGGCCTGAGCTGGACAGAGAAGG--CTGAGTCTTCCCAAG---------------------------CCAGCACCCCAAAGGGGGGCTCCTCTAGA-----A--CAGAcccatggaactttgtacgaggatggacatgctctacatcgtgctgtc--gtatgataaccTCACCGGACTACTTCCATTGAaattt-----aaattaaatacattt i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 102913368 0 - 106955855 C a score=1962405.000000 s hg38.chr19_GL949753v2_alt 339170 706 + 796479 agaag--------ctggctgcaccgtctgcacctccaggactcagtgaccccacgg-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCGTGAAGCTGTAGTAGACATCGCTAATTTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAACAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGGGCAAGAATC-CTCATGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTCTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGGGGCACCGCCCAGGCTCCCTACGCAGCGCATTGCAGGCCCGCCCGTCATCTCCTCCAACCTTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGGTCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGTC-CCTCTTCCAGGAACAGCGGTCCCTCCCCTCCCCCGGGGCTGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGACATTCTCTCTTGGAA-TGT-CCTTCCCTCCTGCCTCGTCCACGGTCTAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC s panTro4.chr19 59286227 707 + 63644993 agaag--------ccggctgcaccgtgtgcacctccaggactcagtgaccccacgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCGTGAAGCTGTGGTAGACATCGCTAATCTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CCCGTGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCAGGCCCGCCCGTCATCTCCTCCAACCTTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTTCCAGGTGGCTAAA-TGGGGTCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGTC-CCTCTTCCAGGAACTGCGGTCCCTCCCCTCCCCCGGGACTGAGGCAGCATCTTCAATATCCTTCAAGAAAGACAGACATTCTCTCTTGGGAGTGT-CCTTCCCTCCTGCCTCGTCCACGGTCCAACGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56168664 703 + 60714840 agaaa--------cccgctgcaccgtctgcacctccagggctcagtgaccccacgt-gcctgatgccatccctactggacggtgcagatacagtgcgtttccTGGGCGTGAAGCTGTGGTAGACATCGCTGCTCTCTGCCCTCTGCAGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGGATC-CCCATGTCTGATTTTATCTGCCCTTGCGGCAACCCTC-TGACGGGGATGTAAC------------------CCGCCCTTCTGTGGG-AAGAATCCTATTCCCAATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCGGG-CCGCCGGTCATCTCCTCCAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGATCCTGAGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCGGC-CCTCTTCCAGGAACAGC-TTCCCCCCCCTCCCCCGCTGCTGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGATATTCTCTCTTGGAG-TGT-CCTTCCCT-CTGCCGCCTCCACGGTCCAAGGTCCAGGCCACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102913368 699 - 106955855 AGAAG--------CTGGCTgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGGCATGAAGCTGTGGTAGACATGGCTGCTCTCTGCCCTCTGCGGATCTAGGCAGAGACCAACCACCCGCAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGGGCAAGAATC-CCCATGTCTGATTTTATCTGCCCTCGCGGCAACCCTC-TGACGGGGATGTAAC------------------GCGCCCTCCTGTGGG-AAGAATCCAAGTCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACCGCCCAGGCTCCCTGCGCAGCGCATTGCACGTCCGCCCGTCATCTCCTCCAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCCCAGGTGGCTAAA-TGGGGTCCTGTGGGGCTCCCCCAA--ACCCAGGGTCCGAGCCAAGCATC-CCTTTTCCAGGAACAGC-GTCCCTCCCCTCTGCCGCTGCCGAGGCAGCATCTTCAATATCCTTCAAGAAAGGCAGACATTCTGTCTTGGAG-TGT-CCTTCCCTCATG------CCACGGTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTCATAACATTTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60172791 704 + 64156825 agaag--------cctgctgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggatggtgcagatacagcgcgtttccTGGGCATGAAGCTATGGTAGACATCGCTGCTCTCTGCCTTCTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATCTCCTCTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAAAATCCAAGCCCCGATGTGCTCATGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGCGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTCCGGGTCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCACAGGTAACCAAA-TGGGGTCCTGCAGGGCTGCCCAAA--ACCCAGGGTCCGAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTTCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCAGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55272565 704 + 59248254 agaag--------cctgctgcactgtctgcatctcgagggctcagtgaccccatgt-gcctgatgccatccctactggatggtgcagatacagtgcgtttcctgggcatgaagctgtggtagacatcgctgCTCTCTGCCCTCTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGGAAGGGAGACCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATCTCCCCTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTCCGGGCCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCACAGGTAACCAAA-TGGGGTCCTGCGGGGCTCCCCAAA--ACCCAGGGTCCGAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTTCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCAGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47362582 704 + 51301725 AGAAG--------CCTGCTGCACTGTCTGCATCTCGAGGGCTCAGTGACCCCATGT-GCCTGATGCCTTCCCTACTGGACGGTGCAGATACAGCGCGTTTCCTGGGCATGAAGCTGTGGTAGACATCGCTGCTCTCTGCCCTCTGTGGATCTAGGCAGAGACCAACCAc---caagaagagaaagggagactTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CCCGTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAAGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTGCGGGCCGGCCTGTCGTCTCCTTGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTCGCAGGTAACCAAA-TGGGGTCCTGCGGGGCTCCCCAAA--ACCCAGGGTCTGAACCAAGCGTT-TCTCTTCCAGGAACAgc-gtccctcccctcccccgctgCCTAGGTAGCCTCTTCAATATCCTTCAAGAAAGGCAGACGTTCTTTCTTGGAG-TGTGCTCTCTTTCATGCCTCGTCCACGTTCCAAGGTCCAGGACACCACCCGTTTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGGTCTTTATAACATTTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47068754 703 + 50890351 agaag--------cctgctgcactgtctgcatcttgagggctcagtgaccccatgt-gcctgatgccatccctactggacggtgcagatacagcgcgtttccTGGTCATGAAGCTGTGGTAGACATTGCTGCTCTCTGCCCTTTGTGGATCTAGGCAGAGACCAACCAC---CAAGAAGAGAAAGGGAGACTTTCTCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAGTGCAAGAATC-CTTGTGTCTGATTTTATCTGCCCTCGCGGCAACCCCC-TGATGGGGATGTAAC------------------CCGCCCTCCTGTGGG-AAGAATCCAGGCCCCGATGTGCTCCTGTTTCCTGAAGCCCTGCAGCTAGCGGGCGAGTGTGTGCGGCGCCGCCCAGGCTCCCTGCGCAGCGCATTGCGGGCCGGCCCGTCATCTCCTCGAACATTCACCCTCCTCTGCACAGTGCACGCCACT-ACCCAATTTACAGGTGACCAAA-TGGGGTCCTGCGGGGCTCCCCCAA--ACCCAGGGTCCAAGCCAAGCGTC-TCTCTTCCAGGAACAGC-GTCCCTCCCCTCCCCCGCTGCCTAGGTAGCATCTTCAATATCCTTCAAGAAAGGCGGACGTTCTCTCTTGGAG-TGTGCTTTCTCTCATGCCTCGTCCATGTTCCAAGGTCCAGGACACCACCCG-TTATTCTACACCAT------------------------------------GACTTCCTG---GGCTTGCTCTTCATAACATTTGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45590800 592 + 49145316 AGAAG--------CTagctgcactgtctgcatctctagggcttagtgaccacatgt-gcctaatgccatccctactggacagtgcagatacagcgtgtttccttggcgtgaagctgtgttagacatcgctgCTCTCTGCCCTCTGCAGATCTAGGCAGAGACCAGCCACCCATAAGAAAAGGAAAGCAGCCCTTCCCTCCCTGACCTCCTTCTGGGTTCCCA-CCAGAATGCAAGAATC-CCCAGGTCTG-----------------------------------------AC------------------CCGCCCTCCCGTGGG-AAGAATCCAAGGCCCACTGTGCTGCTGTTTCCTGAAGGCCTGCAGCTAGCGGGCGAGTGTGTGCGGCACTGGCTGGGCTCCCTGCTCAGGGCTTC---------TCCGTCATCTC---GATCATCCACCCTCCTCTGCACAGTGCACACCA-T-ACCCACTTCACGGGCGACGAAA-TGGGGTCCTGCAGGGCTCTCCCAA--ACCCAGGGTCC--------------CTCTTCCAGGAACAGCGGCCCCTCCCCTCCCCTG------------------------------------------------TCTTGGAG-TGT-CCTTCCCTCACGCCTCCTCCAGGGTCCAAGATCCAGCACACGACGCT-TTATTCTACGCCAT------------------------------------GACTGCCTG---GGCTTGGTCTTTATAACATTTGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19759166 587 - 122678785 aaaagtgagatcttcagctgtgctggccacttttcctgggctcagtggccacaactgggctaatgactTCT---------------------------------GGCGGGA---TGTGTGGGATGGTCCTGCCCTCCACCCTC---------------------------------------------------CCCTCGGTTGCTTGCTTCTGGATGCCCATCCCACGTGCAAACATC-CCCATTGCTGAGACTCCTGTTTCTCACAGCAGCCCCCATGGAGGGGGTGGAACTCTTTCTGTTTCTCACAGCCCCCCTTCTGTGAGCAACAGGCCGAGACTCCACGTCCTCCTGTGGCCTGATGCCAATCATTCCGCA-----------CCAGCATGGCCCTGG------------------------------------------------------ACTCTGCGCA---CGCACCACTCATCCATTTCACTCGTAGCCAAACCGAGGTGCTGCTGGGCTCCTCAGAGTGCACAGGGTTGAGCCCCCATGTCGCCTCTTCT--GGACGGTGCTCCCTCCCTCCCGCTGCCTTAGAGGCTGAGTCCTCAA------------------------------------TGT-CTCCCCTCAATGCCTTGTCCTTGATGCATGGTGCAGGACCCTACCTG-CTGTCatatataataaatataaatatacattttaaatCTAGTGTTTTAGgggatccctgggtggctcagtggtt-taacgcctgcc i canFam3.chr1 C 0 I 84 a score=132768.000000 s hg38.chr19_GL949753v2_alt 339876 53 + 796479 ACCattt---aaaattacatatgtattatatatgtgcaatattacagt-ttttatat s panTro4.chr19 59286934 53 + 63644993 ACCATTT---AAAATTACATATGTATTATATATGTGAAATAGTATACT-Ttttatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169367 53 + 60714840 ACAATTC---AAAATTACATATGTATTGTATATGTGCAATATTATACT-TTTTATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914067 53 - 106955855 ACCATTT---AAAATTACATATGTATTACATATGTGCAATATTATACT-TTTTATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60173495 53 + 64156825 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273269 53 + 59248254 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363286 53 + 51301725 ACCATTT---AAAAttgcatatgtattatatatgtgc-atattatacatttttatat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47069457 53 + 50890351 ACCATTT---AAAATTGCATATGTATTATACATGTGCAATAGTATACA-TTTTATAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591392 55 + 49145316 ACCATTTAAAAAAATGACATATGTACTATGTACGTGCAATATTACAC--TTTTATAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19759753 84 - 122678785 I a score=1420502.000000 s hg38.chr19_GL949753v2_alt 339929 571 + 796479 tatttatagttatatgtatcatgtattatgcaaatgtataatatataacaaatatat-ttttaattatgtaatcttgacatatacatataatttaatgtatataatgttaattgtatatgatttataac-ttataatatatgttacatat----------attcactataatatataatgtataatttatatttgatataaacctatgattaaatataaaatattttttctattatagttatacataatgtatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaatttattatactatatattgtaaat---atatctttcatataatatataa---tatacactatagtcatatgtagtgatacactaacatgttt-tattata-taattatcttccttatatatataatatatatataatatatatatattatgatgtaaacata---tataatataatttaaattataGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGGGAATCAGTGCATTTCTATTGCTCATTCTAACTATTTCT s panTro4.chr19 59286987 528 + 63644993 tatttatagttatacgtatcatgtattatgcaaatgtataatatataacta-tatatattttaattatgtaatcttgacaca--cataaaatttaatgtat-----gttaattgtatatgatttataac-ttata-----tgttgcatat----------attcactataatatataatgtataatttatattaggtataaacctataattaaatataaaatattttttctattatagttatacataatatatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaatttattatactatatattgtaaat---atatctttcatataatata----------cattatagtcatatgtagtgatacactaacatgttt-tattata-taattatcttccttatatacataatatat--------------------gatgtaaacata---tataataTAATTTAAATTATAGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGGGAATCAGTGCATTTCTATTGCTCATTCTA----TTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169420 538 + 60714840 TATTTACAGTTACATGTATCATGTATTATGCAAATGTATA--ATATAACAAATACAT-TTTTAATTATGTAATCTTGACATATGCATATAATTTAATGTAT-----GTTAATCGTATATGATTTATAAC-TTATA-----TGTTACATAC----------ATTCACtataatatataatgtataatttatattcgatataaacctataattaaatataaaatattttttCTATtatagttatacataatgtatacataatagataatatatttacattaatacctat-atttatttattaactataacact---tgaaat---ttatactatatattgtaaatataatatctttcatataatatataa---tatacattatagtcatatgtaGTGATACACTAACATGTTT-TATTATA-TAATTATCTTCCTTATATACATAATATAT--------------------GATGTAAACATA---TATAATATAA-TTACATTATAGGTCTGAAATTCTACATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCGTGTATGGGAATCAGTGCATTTCTATTGCTCATTCTAACTATTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914120 542 - 106955855 TATTTATAGTTATACGTATCATGTATTATGCACATGTATAATATGTAACAAATATATATTTTAATTATGTAATCTTGACACATACATATAATTTAATGTAT---ATGTTAATTGTATATGATTTATAAC-TTATA-----TGTTACATAT----------ATTCACTATA----ATAATGTATAATTTATATTAGATATAAGCCTATAATTAAATATAAAATATTTTTTCTACTATAGTTATACATAATGTAAACATAATAGATAACATATTTACATTAATACCTAT-ATTTATTTATTAAGTATAACACT---TGAAATTTATTATACTACATATTGTAAATATAATATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTTATACATTAACATATTT-TATTATG-TAATTATCTTCCTTATATACGTAATATAT--------------------GATGTAAACATA---TTTAATATAATTTAAATTATAGATCTGAAA-TCTACATTG--------------------------------------------CAAATCATATGT------TTTTATCTGTACATGCATGTATTGGAATCAGTGCATTTCTATTGCTTATTCGAATTATTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60173548 542 + 64156825 TATTTATAGCCATATGTATCATGTATTATGTAAATGtataatatataacaaatatatttttaaattatGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTGTATGATTTATAATAACTTA-----TGTTACATATATTCACTATAATTCACTATAATATATAATGTACAATTTATATTAAATCTAAACCTGtaattaaatataaaata-tttttctattataattatatataatGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTT--------ATTATAACAGT---TGAAAT---TTATACTATATA--GTAAAT----TATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATGCACTAACATATTCTTATTATA-TAATTATCTTCCTTATATACATAATATGT--------------------GACGGaaaaata---tttattataatttaaattataGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCACTCATTCTAATTGTTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273322 551 + 59248254 TATTTATAGCCATATGTATCATGTATTATGTAAATGTATAATATATAACAAATATATTTTTAAATTATGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTGTATGATTTATAATAACTTA-----TGTTACATATATTCACTATAATTCACTATAATATATAATGTACAATTTATATTAAATCTAAACCTGTAATTAAATATAAAATATTTTTTCTATTATAGTTATATATAATGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTTATTTATTAATTATAACAGT---TGAAAT---TTATACTATATA--GTAAAT----TATCTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATGCACTAACATATTCTTATTATA-TAATTATCTTCCTTATATACATAATATGT--------------------GACGGAAAAATA---TTTATTATAATTTAAATTATAGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCACTCATTCTAATTGTTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363339 542 + 51301725 tatttatagctatatgtatcatgtattatgc-aatgtataatatataacaaatatatttttaaattatgtaatctTGACATA--GACATAATTTAATGtatatagtgttaattgtatatgatttataac-ttata-----tgttacatat----------attcactataatatataatgtataatttatattaaatctaaacctgtaattaaatataaaatattttttctattatagttatatataatgtatacataatagatagtatgtttacattaatacctat-atttatttattaattataacagT---TGAAATGtattatactatata--gtaaat----tatctttcatatactatataa---tatacattatagtcatatgtagtgatacactaacatattcttattata-taattatcttccttacataaataatatat--------------------gatggaaaaata---tttattataatttaaattatagatCTGAAATTCTCcattg--------------------------------------------caaatcatatat------ttttatctgtatatGCATGTATGAGAATCTGTGCATTTCTATCGCTCATTCTAATTGTTTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47069510 534 + 50890351 TATTTACAGCTATATGTATCATGTATTATGTAAATGTATAATATATAACAAATATATTTTTAAATTATGTAATCTTGACATA--GACATAATTTAATGTATATAGTGTTAATTGTA-------TATAATAACTTA-----TGTTACATAT----------ATTCACTATAATATATAATGTATAATTTATATTAAATCTAAACGTGTAATTAAATATAAAATATTTTTTCTATTACAGTTATATATAATGTATACATAATAGATAGTATGTTTACATTAATACCTAT-ATTTATTTATTAATTATAACAGT---TGAAATTTATTATACTATATA--GTAAAT----TATGTTTCATATAATATATAA---TATACATTATAGTCATATGTAGTGATACACTAACATATTC---TTATA-TAATTATCTTCCTTATATACATAATATAT--------------------GATGGAAAAGTA---TTTATTATAATTTAAATTATAGATCTGAAATTCTCCATTG--------------------------------------------CAAATCATATAT------TTTTATCTGTATATGCATGTATGAGAATCTGTGCATTTCTATCGCTCATTCTAATTGTTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591447 528 + 49145316 TATTTAAGGTtatatgtatcatgtattatgcaaatgtataatatataacaaatatat-ttataattatgtaatcttgacacgcacatacaatgtaatgtatataatgttaaatgtatatgatttat-ac-ttata-----tgttacatat----------attcactataatatataatgtgtaatttatatTGCTGATAAACCtataattaactataaaatg-tttttctattataattatacataat----agataata-----tatatttaCCTGAATATATATGATTTATTCATTAATTATAACACT---TGAAATTTATTACACtatatattgtaaat---atatatttcatataatatataa----------tataatcatatatagtgatacactaacattttt--attata-taattatgtttcttatatatgtaatatat--------------------gatgtaaacata---tttaatataATTTAAATTATAGATCTGAAATTTTACATTG--------------------------------------------CAAATCATATGT------TTTTATTTGTGTAGGCATATAAAGGCATATGTGCCTTTCTATTACTCATTCTAACTATTTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19759837 522 - 122678785 tgtctctgcctctatctctgaataaataactaaataaaaaatctttaaaaaaTAAATTTTGTGTTT---TAACtt--atata--tgtataatttaatttagataattttaattatatataatgtaaaat----ca-----tttta-atgt----------ataaactata--------tatCTCAATTATATCT------------CAATCATACATA-------TTTACTATTATA-----------------------AGGTA-CGTATTTCTATTGACATTTAC-ATGT----ATAAATGATAGCAATCCATGACATAGAATATAATGTATG----ACAT-----------TATATAATATGTAACACTGCACAGTATATTCATATGTAATAATATATTAATGTATTT-TCTTACATTAATTATATTAGTTGTATATTTAATACAT--------------------AATGTAAACATACATTCTAATAC-ATTTAAATTATAGATCTGAAATTTTATATTGTAAGTTAATGTTTATATGGGTTAACTATATAGATACATTCTATTTAAATtatatatataaagttttatatatatacatatatatataAA------CATTTCTAGTTCTCATTCTAGtttttttt i canFam3.chr1 I 84 I 812 a score=533959.000000 s hg38.chr19_GL949753v2_alt 340500 186 + 796479 CCCCATTGAAGTTCACAAGACGGGAGGCCATTTCTCCTCATTCATGGTGCATCAAATCCGGAGGCTTCAGTGCCTGGCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgtgtacctgaactcaagt s panTro4.chr19 59287515 186 + 63644993 CCCCATTGAAGTTCACAAGACGGGAGGCCATTTCTCCTCATTCATGGTGCATCAAACCCAGAGACTTCAGTGCCTGGCACAGTCCCTGTGAGGACAAAATATTTCTTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgtgtacccgaactcaagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56169958 186 + 60714840 CCCCATTGAAGTTCACGAGACGGGAGGCCATTTCTCCTCATTCACGGTGCATCAAACCCAGAGGCTTCAGTGCCTGGCATAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTCATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagtgccgtgtgtacctgaactcaagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914662 186 - 106955855 CCCCATTGAAGTTCACAAGACGGAAGGCCATTTCTCCTCATTCATGGTGCATCAAACCCAGAGGCTTCAGTGCCCGGCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATTAATAGGAGCATCCCTCCTTTGGGGTTTTCTAATCAgcactgatggcagcgccgtgtgtacctgaactcacgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174090 186 + 64156825 CCCCATTGAAGTTCACAAGGTGGGAGGCCATTTCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAGTGCCTGTCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATtaatagcagcacccctcatttggggttttctaatcagcactgatgtcagcgccgtgtgtacttgaactcaagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55273873 186 + 59248254 CCCCATTGAAGTTCACAAGGTGGAAGGCCATTGCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAGTGCCTGTCACAGTCCCTGTGAGGACAAAATACTTCCTCAGTATtaatagcagcacccctcatttggggttttctaatcagcactgatgtcagcgccgtgtgtacttgaactcaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47363881 186 + 51301725 CCCCATTGAAGTTCACAAGGTGGAAGGCCATTTCTCCTCATTCACAGTGCATCACACCCAGAGCCTTCAGTGGCTGGCACAGTCCCTTTGGGGACAAAATACTTCCTCAGTATTAATAGCAGCGCCCCTCCTTTGGGGTTTTCTAATCAGCACTGATGTCAGTGCCGTGTCTACCTGAACTCAAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070044 186 + 50890351 CCCCATTGAAGTTCACAAGGTGAAAGGCCATTTCTCCTCATTCACGGTGCATCACACCCAGAGCCTTCAATGCCTGGCACAGTCCCTGTGAGGACAAAATAATTCCTCAGTATTAATAGCAGCACCCCTCCTTTGGGGTTTTCTAATCAgcactgatgtcagcgccgtgggtacctgaactcaagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45591975 167 + 49145316 CATTATTGAGGTTCACAAGGCGGGATGCCATTTCTTCTCATTCATGGTGCATCAAACCCGGAGGCTTCCGTGCCTGGCACAGTCCCTGTGAGTACAAaatacttca-------------------ccctccttgggagttttctaatcagcactgatggaagcactgtgtgtacctgaactcaagt i calJac3.chr22 C 0 I 293 e canFam3.chr1 19760359 812 - 122678785 I a score=1963409.000000 s hg38.chr19_GL949753v2_alt 340686 705 + 796479 ctgccctaaacgattctaccaggacagctcttctattgcctctgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccgtcaggcatagagcc------aggaggtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtgacctttatATGTCACTGCATG-AAGGTgagagaagagagaaggaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACAGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCCAGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGTCACCGGGTCTAGGTCCAAGGACG--TACTCTGGGGATAGAAACCCAGGTGGGGAAGGGGCCGCGAATGGCTTATGACCCCGTGTCCTCCCCTGGGAGTTTCTGGTCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCAGCTTCAATCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACA-GCTACGTCCC s panTro4.chr19 59287701 707 + 63644993 ctgccctaaaggattctaccaggacagctcttctattgcctctgtttcacatga-----------------ggaatttgggacacaggaggtttggatgagtcaccgtcaggcatagagcc------aggaggtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtgacctttatATGTCACTGCATG-AAGGTgagagaagagagagggaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACAGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGGCACTGGGTCTAGGTCCAAGGACGACTACTCTGGTGATAGAAACCCAGGTAGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGCCCTCCCCTGGGAGGTTCTGGTCACAGATCACAGGGGGAGATGGACCACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCCGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGGTGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACA-GCTACGTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56170144 694 + 60714840 ctcccctaaacgattctaccaggacagctcttttattgcctctgtttcacagga-----------------ggaatttgggacacaggaggtttgggtgaatcaccatcaggcatagagct------gggaggtgacagaaccaccgggatttgaaccATGAACCCA-----------GT-AGAAGGGTCTGTCCTCGCCACCTTTTTATGTCACTGCATG-AAGATgagagaggagagaggaaaggagaagaagaga--gggagagaaacagagGCAAGATATTCCCGCAGACGGAAGGCTAATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGAGCATGTCCCG-----CTGTGCCCCAGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCATGGCATCGCTCCTCCCGCCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGGCACTGGGTCTAGGTCCAAGGACG--TACTCTGGTGATGGAAACCCAGGTGGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGTCCTCCCCTGGGAGGTTCTGGCCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGTCTTG-------------------------------------------------GGGCAGCTTCACTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGACGGAAGGGAAGCCTCAAGGCTTCATCCTGGTCACCGTTCACA-GCTACATCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102914848 709 - 106955855 ctgccctaaacgattctaccaggacagctcttttattgcgtctgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccgtcaggcacagagcc------aggaagtggcagaaccaccgggatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcGCCACCTTTACATGTCACTGCATG-Aagatgagagaggagagagagaaggagaagacgaga--gggagagaaacagagGCAAGATATTCCCGCAGACGGAAGGCTGATAAAAACCAGACACTGGACTTGAACCAGGTCTGCGGGACTCAGGGGCATGTCCCG-----CTGTGCCCCGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACGGCATCGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGCTCCCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCAGTCACTGGGTCTAGGTCCAAGGACGACTACTCTGGTGATGGAAACCCAGGTGGGGAAGGGTCCGCGGATGGCTTATGACCCCGTGTCCTCCCCTGGGAGGTTCTGGTCACAGATCACAGGGAGagatggacaactcgagacccagggacttg-------------------------------------------------gggcagcttcactcccatcacacagagt-cca-gggcagagccagatggaagggaagcctcatggcttcatcctgctcaccgttcaca-gctacATCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174276 712 + 64156825 ctcccctaaacgattctaccggggcagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccatcaggcatggagcc-----gggggggtggcagaaccaccgggatttgaaccatgaacccagcaatcgggctgc-aggagggtctgtcctcgtaacctttatATGTCACTGCATGAAAGATgagagaggagagagggaaggagaaggagaga--gagagagaAagagagggtagatattcccgcagacagaaggctaataaaaaccagacactggacttgaaccaggtcagctggactcaggagcacgtcccatccctctgtgccccggcagcccAGGAGCCTCTGAGGGGGTCCAGATGGAGCACAGCATGGCTCCTCCCACCTCCCTATGTGGCTTCAGCCCCTGGTCCCGCCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCCGTCACTGGGT----GACCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGAAGAAGGGCTCGCAGATGTCTTACGACCCCGTGTCCTCCCCTGGGAGGTTCTAGTTACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------CGGCAGCTTCTCTCCCAT--CACAGAGTCCCG-GGGCAGAGCCAGATGGGAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTATGTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55274059 753 + 59248254 ctcccctaaacgattctaccggggcagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccctcaggcatggagcc------ggggggtggcagaaccaccgggttttgaaccatgaacccagccatctggctgc-aggagggtctgtcctcgtaacctttatatgtcactgCATgaaagatgagagaggagagagggaaggagaaggagaga--gagagagaAagagagggtagatattcccacagacagaaggctaataaaaaccagacactggacttgaaccaggtcagctggactcaggagcacgtcccatccctctgtgccccggcagcccAGGAGCCTCTGAGGGGGTCCAGATGGAGCACAGCATGGCTCCTCCCACCTCCCCATGTGGCTTCAGCCCCTGGTCCCACCTGCCTGAGCTCACAGCCTGAGCCTCACAGGCCGTCACTGGGT----GACCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGAAGAAGGGCTCGCAGATGTCTTACGACCCCGTGTCCTCCCCTGGGAGGTTCTAGTCACAGATCACAGGGGGAGATGGACAACTTGAGACCCAGGGACTTGGGGCAGCTTCACTTCAATCACACAGAGTCCAGGGCC-----AGAGCCA-GGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTATGTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47364067 774 + 51301725 CTCCCCTAAACGATTCTACCAGGACAGTTATTTTACTGCCTATGTTTcacatgacacaggacacaggacacaggacacaggacacaggacGTTTGGGTGAGTCACCATCAGGCATGGAGCCggggggggggggTGGCAGAACCACCGGGATTTGAACCATGAACCCAGCAATCTGGCTGC-AGGGGGTTCTGTCCTCGTAACCTTTATATGTCACTGCATGAAagatgagagaggagagagggaaggagagggagaga--gagagagaaacagagggtaGATATTCCCG-AGAAAGAAGGCTAATAAAAACCAGATACAGGACTTAAACCAGGTCAGCTGGACTCAGGAGCACGTCCTG-----CTGTGCCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCATAGCAtggctcctcccacctccccatgtgGCTTCAGCCCCTGGTCTCACCTGCCTGAGCTCACAGCCCGAGCCTCACAGGCCGTCACTGGGTCTAGGTCCGAGGACGACCACTCTGGGGATGGAAACCCAGGTGGAGAAGGGTCCGTGGATGTCTTATGACCCCGTGTCCTCCCTTGGGAAGTTCCAGTCACAGATCAC-GGGGGAGATGGACAACTTGAGACCCAGGGACTTGGGGCAGCTTCATTCCCATCACACAGAGTCCA-----GGGGCAGAGCCAGGGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTACGTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070230 711 + 50890351 ctcccctaaacgattctaccgggacagctattttactgcctatgtttcacatga-----------------ggaatttgggacacaggaggtttgggtgagtcaccatcaggcatagagcc------gggaggtggcagcaccaccggaatttgaaccatgaacccagcaatctggctgc-aggagggtctgtcctcgtaacctttatATGTCACTGCATGAAAGGTgagagaggagagagggaaggagagggagagagggagagagagagagagggTAGATATTCCCGCAGACAGAAAGCCAATAAAAACCAGACACAGGACTTGAACCAGGTCAGCTGGACTCAGGAGCACGTCTTG-----CTGTGCCCCGGCAGCCCAGGAGCCTCTGAGGGGGTCCGGATGGAGCACAGCATGGCTCCTCTCACCTCCCCGTGTGGCTTCAGCCCCTGGTCACACCTGCCTGAGCTCACAGCCCGAGCGTCACAGGCCGTCACAGGGTCTAGGTCCAAGGACGACCACTCTGGTGATGGAAACCCAGGTGGAGAAGGGTCCGTGGATGTCTTATGACCCCGTGTCCTCCCTTGGGAGGTTCCAGTCACAGATCACATGGGGAGATGGACAACTTGAGACCCAGGGACTTG-------------------------------------------------GGGCAGCTTCTCTCCCAT--CACAGAGT-CCA-GGGCAGAGCCAGATGGAAGGGAAGCCTCATGGCTTCATCCTGGTCACCGTTCACAGGCTACGTCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45592435 683 + 49145316 ctcccctaaatgattctgcaaggacagctttttcactgcttatttttcacatga-----------------ggaatttgggacacag---gtttgtgtgagtcaccatcaggcacagagct------ggggggtggcagaagcaccaggacttgaaccatgaacccagcaatctggctgcaaggagggtccgtcatcgtaacctttatatgtcactgCATGAAAGATGAGAGACGAGAGAGGGAAGGAGA----------GGTAGACAAGGAGAGGGAAGACATTCCTGCAGACAGAGGGCTAATTAAAACCAGACACTGGACTTGAACCAGGTCTGCTGGGCTCAGGAGCATGTCCCA-----CTGCACCCTGGCAGCCCAGGAGCCTCTGAGGGGGTCTGGATGGAGCACAGCATCACTCCTCCCACCTCC--------------CACATGGTCCCACCTGCCTGAGCTCAGAGCCCGAGCCTCACAGACTGTCACT-GGTCTAGGT-CAGGGACGACCACTCTAGCGAGGGAAACACAGGTAGGGAAGGGTCTGTGGATGGCTTCTGACCCCGTGTCCTCGCCTGGAAGGCTCTGATCACAGACCTCAGCGGGAGATAGGCAACTTGACACCCAGGGACCTG-------------------------------------------------GGGCAGCTT-ACTCCCAT--CACAGAGT-CCAGGGGCAGAGCCAGATGGAAGGGAAGCCTCATGACTTCATCCTGGTCACCGTGCACAGGCCATGTCCC i calJac3.chr22 I 293 C 0 e canFam3.chr1 19760359 812 - 122678785 I a score=1036356.000000 s hg38.chr19_GL949753v2_alt 341391 343 + 796479 CTCCCTGTGGAGCCCTC-CTCCTCTTAAGGGACCTTACTCCACCGTTCAGGCCTCCCCCGGAGATCACAGAGCCAACAGGAGCAGCCCCGTCCCTCTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGCGAGCCCGGAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATGGCCTTGTGCCGTTAAGCACGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGGATCAGACTAGTACCTCCCCC s panTro4.chr19 59288408 343 + 63644993 CTCCCTGTGGCGCCCTC-CTCCTCTTAAGGGACCTTACTCCACCGTTCAGGCCTCCCCCGGAGACCACAGAGCCAACAGGAGCAGCCCCGTCCCTGTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGCGAGCCCGGAAGTCTGGGGTGGGGATGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCGTTAAGCAAGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGGATCAGACTAGTACCTCCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56170838 343 + 60714840 CTCCCTGTGGCGCCCTC-CTCCTCTTAAGGGACCTCACTCCACTGTTCAGGCCTCCCCCGGAGACCACAGAGCCAACAGGAGCATCCCCGTCCCTCTCCGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAAAGGTGAGGCCACCCCCACAAGGGGGCAGCGTGGAGCTCGGTCAAGCCCGGAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCTTTAAGCAAGAAACTTTAATTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAAAATCAGACTAGTACCTCCCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102915557 338 - 106955855 CTCCCTGTGGCGCCCTC-CTCCTCTTAGGGGACCTCACTCCACTGTTCAGGCTTCCCCCGGAGACCACAGAGCCAATAGGAGCATCCCCGTCCCTCTCCGCGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAAAGGTGAGGCCACGCCCACAAGGGGGCAGCCTGGAGCTCGGTCAAGCCCGGAAGTCTGGGGTGGGCCTGCCCGGGTGGGCGGCCCCTGCCCC----------------------------------TTCATAGCCTTGTGCCTTTAAGCAAGAAAC-----TTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAAAGGATCAGACTAGTGCCTCCCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60174988 354 + 64156825 CTCCCTGTGGCACCCTC-CTCCTCTTACAGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGTCCCTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGAGGGGTGAATAGTGAGGCCATGCCCACAAGGGGGCagcatggagcttgggagaacccgaaagtctggggtggggctgcccgggtgggtggcccctgcccc-----------------------gcccctgccccttcatagctttgtgactttaagcaaggaacttTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55274812 361 + 59248254 CTCCCTGTGGCACCCTC-CTCCTCTTACAGGACCTTACTCCACTGTTCAGTCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGTCCCTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCGGGAGACGCCGAAAGTCTGGGGTGGGGCTGCCCGGGTGGGTGgcccctgcccctg------------ccc----ctgcccctgcccctTCATAGCCTTGTGACTTTAAGCAAGAAACTTTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47364841 350 + 51301725 CTCCCTGTGGCACCCTC-CTCCTCTTACGGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGTATCACCATCCCTCTTCAGGTGTCCCAGGTTGG-AGGTGAGTTCTAAGTCCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCACAAGGGGGCAGCGTGGAGCTCCGCAGAACCCGAAAGTCTAGGGTGGGGCTGCCCGGGTGGgtggcccctgcccc----------------------tgcccctgccccttcaTAGCCTTGTGACTTTAAGCAAGAAACTTTAGTTTATGTTTTGCATATT----------AGGAGGAGGAGTTAGAGAACCAGACTAGTACCTCCCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47070941 355 + 50890351 CTCCCTGTGGCACCCTC-CTCCTCTTACGGGACCTTACTCCACTGTTCAGGCCTCCCCCGGAGATCACAGAGCCAATAGGAGCATCACCGACCCTCTCCAGGTGTCCCAGGTTGGAAGGTGAGTTCTAAGTTCCTCCAT-----------CAGG-----TGCAGAGCGGGGTGAATGGTGAGGCCACGCCCAcaagggggcagcgtggagctccggagaacccgaaagtctggggtggggctgcccaggtgggtggcccctgcccc----------------------tgcccctgccccttcatagccttgtgactttaagcaagaaacttTAGTTTATGTTTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGACTAGTACCTCCCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593118 371 + 49145316 CTCCCTCTGGCATTGTC-CTCCTCTTAAGGGACCCTACTCCACTGTTCAGGCCTCCCCCGGAAATCACATAGCCAACAGGAGCCTCCTGGTCACTCTCTGGGTGTCCCAGGTTGGAAGGTGAGTTCTCAGTCACTCA-------------CAGG-----TGCAGAGCGGGGTGAATGATGAGGACATGCCCACAAGGGGGCAGCATGGAGCTCAGGCAAGCCCAGAAGTCTAGGGTGTGGCTGCCCGGGTGGGCGgcccctgccccggcccctgccccttccc----ctgccccttccccttcATAGCCTCCTGCCTTTGAGCAAGAAACTTGAATTTCTGCGTTGCATATTAGA------GAGGAGGAGGAGTTAGAGAATCAGCCTAGTACCTCCCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761171 325 - 122678785 CTCCTAGAGGGGCTCTCTCTTCCTCTACCTGACCTAATGCCACTGT-------------GGGG---ACATAACCATCAAGAGC--CCTGGTCTCTCCCGCAGAGTCTGAGTTTGGAAGATGAGCTGTTAGTTTCTCTGTGCCTCTAGACCCAGGTTCCTTGCAGAGC--TGCCAAGAGTAGGACCCTGCCCACAAGGGGGTGGC------------CACCACCTGAGGTCT------------------------GCCCCTCCCCC--------------CCTTGGGCTGGTTCCACCCCTTCAGAGCTTTGTGCCTTTGGGCATGAAACCTGCA---AGGCTTTGCACATTAGAGGAGTTGGGGGGGAGCTCTCAGAGG-TCGGA-GAGTGCCTCCCAC i canFam3.chr1 I 812 C 0 a score=561878.000000 s hg38.chr19_GL949753v2_alt 341734 197 + 796479 ATTAAGTGGTGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACAAGGTTGCAATCACTGTACCATTGCTGCTATGGTCTCTGTGAGCATTAGCGACCTCCCAGAGCTTGGTGGGTGTCGGTGCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCAGAG--GGCTGGACCCGGAACAGCATCCG s panTro4.chr19 59288751 197 + 63644993 ACTAAGTGGCGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACAAGGTTGCAATCACGGTACCATTGTTGCTATGGTCTCTATGAGCATTAGCGACGTCCCAGAGCTTGGTGGGTGTCGGTCCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGAAGAG--GGCTGGACCCGGAACAGCATCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171181 197 + 60714840 ATTAAGTGGCGCTTGCATTAAGTACTTTCCACAGTTCCTGGCATAGAACAAGGTTGCAATCACCGTACCATTGTTGCTATGGTCTCTACGAGCATTAGCGACCTCCCAGAGCTGAGCAGGTGACAGTGCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCAGAG--GGCTGGACCCAGAGCAGCATCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102915895 197 - 106955855 ATTAAGTGGCGCTGGCATTAAGTGCATTCCACAGTTCCTGGCATGGAATGAGACTGCAATCACCATACCACTGTTGCTATGGTCTCTATGAGCATTAGCGACCTCCCAGAGCTGAGCGGGTGACAGTCCCTTCCCGTGGCCTCCCTAGACCTTGATTCCAAGCCCAGGGCAGAG--GGCTGGACCCGGAGCCGCATCCG i nomLeu3.chr10 C 0 I 370 s rheMac3.chr19 3831913 197 - 64156825 GGAGAGTGGTGCTTGCACTAAGTGTTTTCCACAGTTCCTGGCATGGAACGAGGTTACAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCTGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAAACCTTGACTCCAAGCCCAGGGCCGAG--GGCCGGACTCGGAGCTGCATCCC i rheMac3.chr19 I 74644 C 0 s macFas5.chr19 55275173 197 + 59248254 GGAGAGTGGTGCTTGCACTAAGTGTTTTCCACAGTTCCTGGCATGGAACGAGGTTACAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCTGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAAACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365191 197 + 51301725 GGAGAGTGGTGCTTGCATTAAGTGCTTTCCACAGTTCCTGGCATGGAACGAGGTTGCAATCACGGTACCATTGTTGCTATGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCCGGGCGGGTGTCAGTTCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071296 197 + 50890351 GGAGAGTGGTGCTTGTATTAAGTGCGTTCCACAGTTCCTGGCATGGAACGAGGTTGCAATCACGGTACCATTGTTGCTTTGGTCTCTAGGAGCATTAGCCACCTCCCAGAGCCGGGCGGGTGTCAGTCCCTTCCCGTGGCCTCCCTAGACCTTGACTCCAAGCCCAGGGCCGAG--GGCTGGACTCGGAGCTGCATCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593489 196 + 49145316 ATAGAGTGGGGTTTGTGTTCAGCGCTTTCCGGGGTGCCTGGCGTGGAGTGAGGTTGCAGTCGTGGTACCGTGGCTGCTCTGGTCTCTATGAGCATCAGCGACCTCCCAGAGCTGGGCA-GTGTCAGTCCCTTCCCACAGTCTCCCTAGTCCTTGACTCCAAACCCAGGGCCCAG--GGCTGGACCCGGAGCTGCATCCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761496 154 - 122678785 ATCCTGTGCTACTAGCATTGACTGCTTT-CACAGCACTTGGCACAAG--------------------------------TAGT-----------TCAACCAGTTAGTGGTGCCCTGCAGGTGGCAGCCCCTCACTGTGGTCTCACCAGTCCCTAAC-CCAAGCCTAGGGGGGTGGAGGCTGGGCCTGCAGCCCGATTGC i canFam3.chr1 C 0 C 0 a score=8595.000000 s hg38.chr19_GL949753v2_alt 341931 2 + 796479 CA s panTro4.chr19 59288948 2 + 63644993 CA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171378 2 + 60714840 CA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916462 2 - 106955855 CA i nomLeu3.chr10 I 370 C 0 s rheMac3.chr19 3832110 2 - 64156825 CA i rheMac3.chr19 C 0 I 3368 s macFas5.chr19 55275370 2 + 59248254 CA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365388 2 + 51301725 CA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071493 2 + 50890351 CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593685 2 + 49145316 CA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761650 2 - 122678785 CA i canFam3.chr1 C 0 C 0 a score=84689.000000 s hg38.chr19_GL949753v2_alt 341933 35 + 796479 GCACAGA----TTCCCCTGTAATCCCCTCCAGCTGAGGG s panTro4.chr19 59288950 35 + 63644993 GCACAGA----TCCCCCTGTAATCCCCTCCAGCTGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171380 35 + 60714840 GCACAGA----TCCCCCTGTAATCCCTTCCGGCTGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916464 35 - 106955855 GCACAGA----TCCCCCTGTAATCCCCTTCAGCTGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175350 35 + 64156825 GCACAGA----TCCCACTGTAATCCCTTCCGGCTGAGGA i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55275372 35 + 59248254 GCACAGA----TCCCTCTGCAATCCCTTCCGGCTGAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365390 35 + 51301725 GCACAGA----TCCCTTTGCAATCCCTTCCGGCTGAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071495 35 + 50890351 GCACAGA----TCCCTCTGCAATCCCTTCCGGCTGAGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593687 20 + 49145316 GCAC-------------------CCCCTCCTGCTGAGGA i calJac3.chr22 C 0 I 91 s canFam3.chr1 19761652 33 - 122678785 GCATAGAGCACCCCCCCAGCAATGTCCCCAAGC------ i canFam3.chr1 C 0 C 0 a score=118306.000000 s hg38.chr19_GL949753v2_alt 341968 51 + 796479 CCCTGCTACTGACCAGCTGAGGAGCCGGGCTCTGTG-----TCCGGGGAGTCCGGG s panTro4.chr19 59288985 51 + 63644993 CCCTGCTACTGACCAGCTGAGGAGCCGGGCTCTGTG-----TCGGGGGAGTCCGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171415 51 + 60714840 CCCTGCTACTGACCAGCTGAGGAGCCGAGCTCTGTG-----TCGGGAGAGTCCGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916499 48 - 106955855 CCCTGCTACCGACCAGC---AGAGCCGAGCTCTGTG-----TCGGGGGAGTCCGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175385 51 + 64156825 CCCTGCTACTGACCAGCTGAGGAGTCGGGCTCTGTG-----ACGGGGGAGTCCGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275407 51 + 59248254 CCCTGCTACTGACCAGCTGAGGAGTCGGGCTCTGTG-----ACGGGGGAGTCCGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365425 51 + 51301725 CCCTGCTACTGACCAGCTGAGGAGTCAGGCTCTGTG-----ACGGGGGAGTCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071530 51 + 50890351 CCCTGCTACTAACCAGCTGAGGAGTTGGGCTCTGTG-----TCAGGGGAGTCTGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19761685 52 - 122678785 -ATTGTTACTCACCAGCTGAAGAATAGATGTGTGTGTGTGTTGTGGGGGGTCC--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45593707 91 + 49145316 I a score=320391.000000 s hg38.chr19_GL949753v2_alt 342019 102 + 796479 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GAC s panTro4.chr19 59289036 102 + 63644993 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGACCGCAT--GGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171466 102 + 60714840 CCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCTCCCATCCAAAGGCCGCAT--GGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916547 102 - 106955855 TCTCCAGAGGTTTCTGTAAACAGGGGCAGGAGAAGGATT---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175436 102 + 64156825 TCCCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275458 102 + 59248254 TCCCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365476 102 + 51301725 CCTCCAGAGGTTTCTGTAAACAGGGGCAAGAGAAGGATG---------------TAGAACCCATCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCAT--GGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071581 102 + 50890351 CCTCTAGAGGTTTCTGTGAACAGGGGCAGGAGAAGGATG---------------TAGAACCCGTCCCAACCAACCTGCCCTCCTCCACCCTGAGCCCCCATCCAAAGGCCGCGT--GGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593798 99 + 49145316 CCCCCAGGGGTTCCTGTAAACAAGGGCAGGAGAAATATT---------------TGGAA-CCATCCCATCCAACCTGCCCTCCTCC-CCCCGAGCCGCC-TCCAAAAGCCCCAT--GTT i calJac3.chr22 I 91 C 0 s canFam3.chr1 19761737 105 - 122678785 ------------TCTGTGACCAGGGCAGAAGGACCGATGCTAGGTGGACACCCCCAGGGTCTATCCCACTC--CTGGCCTCTCTGTACCCTGAGCACCCATCCGAAGGCCACATCCGGC i canFam3.chr1 C 0 C 0 a score=56505.000000 s hg38.chr19_GL949753v2_alt 342121 20 + 796479 CATCACGCAATCCCAGACAA s panTro4.chr19 59289138 20 + 63644993 CATCACGCAATCCCAGACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171568 20 + 60714840 CAGCATACAATCCCAGACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3911520 18 + 106955855 CGTCACGC-ATCCCAGAC-A i nomLeu3.chr10 n 0 C 0 s rheMac3.chr19 60175538 20 + 64156825 CATCAGGCAATCCCAGACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275560 20 + 59248254 CATCAGGCAATCCCAGACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365578 20 + 51301725 CATCAGGCAATCTCAGACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071683 20 + 50890351 CATCAGGCAATCCCAGACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593897 20 + 49145316 CATTACACAATCCCAGACAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761842 20 - 122678785 CATCACTCAGGCCCAGAGAA i canFam3.chr1 C 0 I 5 a score=49782.000000 s hg38.chr19_GL949753v2_alt 342141 17 + 796479 TGTCTCGAGACTCCTGA s panTro4.chr19 59289158 17 + 63644993 CGTCTCGAGACTCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171588 17 + 60714840 CATCCCGAGACTCCTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3911538 17 + 106955855 TGTCCCGAGACTCCTGA i nomLeu3.chr10 C 0 I 9595 s rheMac3.chr19 60175558 17 + 64156825 TGTCCCGAGACTCCTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275580 17 + 59248254 TGTCCCGAGACTCCTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365598 17 + 51301725 TGTCCGGAGACTCCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071703 17 + 50890351 TGTCCCGAGACTCCTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593917 17 + 49145316 TGTCCCAAGACTCCAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I a score=15525.000000 s hg38.chr19_GL949753v2_alt 342158 7 + 796479 GAAAACG s panTro4.chr19 59289175 7 + 63644993 GAAAACG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171605 7 + 60714840 GAAAACG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60175575 7 + 64156825 GAAAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275597 7 + 59248254 GAAAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365615 7 + 51301725 GAAAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071720 7 + 50890351 GAAAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593934 7 + 49145316 GAAAATG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I e nomLeu3.chr10 3911555 9595 + 106955855 I a score=838743.000000 s hg38.chr19_GL949753v2_alt 342165 298 + 796479 AGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTTCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGATTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGAGTGCATGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGGCCATCCCTGGACCCTGCGTTCTGCCCAGTGGGAGATGAACCA s panTro4.chr19 59289182 298 + 63644993 GGGCAGGGGACAAGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTTCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACTTGAAGGTGGATTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGGGTGCATGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCACCCTGGTCAGGGGCCATCCCTGGACCCTGTGTTCTGCCCAGTGGGAGATGAACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171612 298 + 60714840 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTTGTCACTCCCTCTGCTCCT--CCCACCACAAGCACTGCTTGACCTCAAGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGATTGGAGCCTATCCAGTGGACTTTGACTCCAGGATATCTC--GGGCTGAGCACACACAAGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGGCCATCCCTGGCCCCTGTGTTCTGCCCAGTGGGAGATGAACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916649 269 - 106955855 AGGCA---------------------------CTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCGTTGAGGTCCTGGGGGGACATGAAGGTGGA-TGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGCTGAGCACACACAGGGGTGCGTGTGGTCACAAACCAAAGGCTTTCCCAAAGCACTGTCCCGCCCTGGTCAGGGACCAG-GATGGCCCCTGTGTTCTGCCCAGTGGGAGACGAACCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175582 300 + 64156825 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTCTGGGGCTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCACTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275604 298 + 59248254 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CCTTTGAGGTCCTGGGGGGACATGAAGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--GGGTTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365622 295 + 51301725 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGACTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGGGA--CC-TTGAGGTCCT-GGGGGACATG-AGGCGGGCTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTC--CGCTTGAGCACACACAGGGGCGTGTGTGGTCACGTTCCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47071727 300 + 50890351 GGGCAGGGGACAGGAGGCTGGGGAGAGCCCCGCTGCTTGCCCCATTCTCCCTGGGGCTGGTCACTCCCTCTGCTCCT--CCCACCACAAGCTCTGCTTGACCTCAGGAGA--CCTTTGAGGTCCTGGGGGGACATGACGGTGGGTTGGAGCCTCTCCAGTGGACTTTGACTCCAGGACATCTCTGGAGCTGAGCACACACAGGGGTGCGTGTGGTCACATACCAAAGGTTTTCCCAAAGCCCTGTCCAGCCCTGACCAGGGGCCATCCCTGGGCCCTGTGCTCTGCCCAATGGGAGATGAACCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45593941 288 + 49145316 GGGCAGGGGACAGGAGGCT-GGGAGAGCCCCGCTGCTTGGCCCATTCTGCCAGGGGCTGGTCACTCCCTCTGCTCCCCACTCCCCACCAGCTCTGCTTGACCTCAGGGGACTCCTTTGAGGCCCTGGGGGTACATGAAAGTGGAT--------------TGGACTTGGACTCCAGGATGTCTCTGCGGCTGAGCACACACAGGGGTCCGTGTGGTCACACACCAGAGGATGTCCCACAGTACTGCCCAGCCCTGGTCAGGAGCCA-CCCTGGACCCTGTGTTCTGCCCAATGGGAGATGAGCCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19761862 5 - 122678785 I a score=1245326.000000 s hg38.chr19_GL949753v2_alt 342463 384 + 796479 CTCCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAAT---AAGCGGGACCATCCATCCCGTGTGAAAAGACACTCATCCTCTTGTAGGGGGGTTGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCAG----ATGCTGGAGCTGAGTGTCCACGCCATCCGTGGCGTCCAGAGGAGATCAGGGCTCCAGGGACCTAA-----GCAAGTATGA-GGCAGAGGGGAGGTGTGTGCAGACGGAGAGGGGAAGGGGAGGGCTTGGCGGTCAGG--AGGAGGACAAGGTTGGCCAC----AGAGGA--CAGCAGCTGGGAcagggtccagggacctggggacaagctcgagggtcgagCTGAGAC s panTro4.chr19 59289480 384 + 63644993 CACCAGGAGGAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAAT---AAGCGGGACCATCCATCCCGTGTGAAAAGACACTCATCCTCTTGTAGGGGGTTTGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCAG----ATGCTGGAGCTGAGTGTCCAGGCCATCCGTGGCGTCCAGAGGAGAACAGGGCTCCAGGGACCTAA-----GCAGGTGTGA-GGCAGAGGGGAGGTGTGTGCAGACAGAGAGGGGGAGGGGAGGGCTTGGCGGTCAGG--AGGAGGGCAAGGTTGGCCAC----AGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGTCGAGCTGAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56171910 382 + 60714840 CACCAGGAGAAGCATATTGCCTGGGG-----CAGATTCTGGCTCAGT---GGAAAGGAATAACAAGTGGGACCATCTATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTTGCCCCCTAATCTCTGGGGACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCAACCCA----ATGCTGGGGCTGAGTGTCCAGGCAATCCATGGTGTCCAGAGGAGACCAGGGCTCCAGGGACCTAA--------------A-GGCAGAGGGAATCTGTGTGCAGAGGGAGAAGGGGAGGGTAGGGGTTGGGGATCAAG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGAGACCTGGGGACAAGCTCGAGAGGCAGGCTGAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102916918 390 - 106955855 CACCAGGAGAAGCACATTGCCTGGGG-----CAGATTCTGGCTCAGA---GGAAAGGAATAACAAGTGGGACCATCCATCCTGTGTGGAAAGACACTCAACCCCTTGTAGGGGGGTTGCCCCC-AATCTCTGGGAACCTCCTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGCGTCCAGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGTGA-GGCCGAGGGAACCTGTGTGCAGAGGGAGAGGGGGAGGGGAGGTCTTGGGGTTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGTCGAGCTGAGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60175882 392 + 64156825 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGCGAGGGCAGAGGGGAGGTGTGTGCAGAGGGAGAGGGGGAGAGGAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCCGAGCTGAGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55275902 392 + 59248254 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCACCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGCGAgggcagaggggaggtgtgtgcagagggagagggggagaggagggcttgggggtcagg--aggagggcaagggTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCCGAGCTGAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47365917 386 + 51301725 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTCGCCCCCTAATCTCTGGGAACCCACTCCCCACCCAGCCAAGCGGAGCCAGCTCTGAGCCCACCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGCATCCAGAGGACACCAGGGCTCCAGGGACCTAA-----GCAGGTGTgagggcagaggggagatgtgtgcagagggagacggggaggggagggcttgggggtcagg--aggagggcaagggtggccacagagagaggg--cAGCAGCTGGGACAGTGTCCAGGGACCTGT------GCTCGAGGTCTGAACTGAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072027 385 + 50890351 CACCAGGAGAAGCACATTGCCTGGGG-----CAGGTTCTGGCTCAGT---GGAAAGGAATAACAAGTGAGACCATCCATCCTGTGTGAAAAGACACTCATCCCCTTGTAGGGGGGTC-CCCCCCAATCTCTGGAAACCCACTCCCCACCCAGCCAAGCGGAGCCAGCTCTGAGCCCATCGG----ATGCTGGGGCTGAGTGTCCAGGCCATCCGTGGTGTCCGGAGGAGACCAGGGCTCCAGGGACCTAA-----GCAGGTGTGAGGGCAGAGGGGAGGTGTGTGCAGTGGGAGAGGGGGAGAGGAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGG--CAGCAGCTGGGACAGGGTCCAGGGACCTGT------GCTTGAGGGCCAAGCTGAGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594229 391 + 49145316 CAGCAGGAGGAGCACATTCCCTGGGG-----CAGGTTCTGGCTCAGG---GGAGAGGAATAACAAGTG-GACCATCCATCCTGTGTGAAAAGACGCTCAGCCCCTTGTAGGGGGGTTGCCCCCTGATCTCTGGGAACCCACTCCCCACCCAGCCAAGCAGAGGCATCTCTGAGCCCACCCG----CTGCTGGGGCTGAGTGTCCAGGTCATCTGTGGTGTCCAGAGGGGACCAGGGCTCCAGGGACCTAA-----GCAAGTGTGACGGCAGGGTGGAGGGGTGCGCAGAGGGAGAGGGGGAGGGCAGGGCTTGGGGGTCAGG--AGGAGGGCAAGGGTGGCCACAGAGAGAGGA--CAGCAGCTGGGACAGGGTCCAGGGACCTGGGGACAAGCTCGAGGGCAGAGCTGAGAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102816998 369 + 122678785 CTGCAAGCAAGGCACATGCCCTGGGGCCCCACAGATCCTGGCCCCGTCCAGGAAAGGA-----CAGTTTAACA--CCATCCTTAGTGAGAGGGCTC----------------------------AGTCTCTGGAAGCCCATTCCCCACCCAGCCCC-CATGCCAAGCTCTGTGCCTCCCCGACCAATGCTGGGACTGAGCGTCCAGGCCATTCAT-GTGTCCAGATGAGACCAGGGCTCCGGGGACCTAACGCCACCAGGTGGAA-GGCAGAGGG-ACAGGCGTGCAGAGGGAGAGAGGGAGTAGAGGGCCTGAAG---AGGCCAGGAGGGCAGAGGAGCCTGTGAACAGGGGATGCGGCAG--GGAACAGGGTCCAGGGAGCTGGGGGCAAACCTGAGGGCAGAGGTGAGAT i canFam3.chr1 n 5 n 5 a score=19433.000000 s hg38.chr19_GL949753v2_alt 342847 6 + 796479 TGGGGC s panTro4.chr19 59289864 6 + 63644993 TGGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172292 6 + 60714840 TAGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917308 6 - 106955855 TGGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176274 6 + 64156825 TGGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276294 6 + 59248254 TGGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366303 6 + 51301725 TGGGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072412 6 + 50890351 TGGGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594620 6 + 49145316 TAGGGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102817367 5 + 122678785 I a score=1160716.000000 s hg38.chr19_GL949753v2_alt 342853 370 + 796479 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTCTGCTCAGACCATTTAGGGGGCTTATAATAGATGCAGCGATAAGGCCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCTTCAGTATCATTGTATGTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAACCGGGCCCCGGCACACGAAAGTCACATGGCTCCCCAGGGGGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGATCTTCTAGGAGGGAAGCAGAGCAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc s panTro4.chr19 59289870 370 + 63644993 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTCTGCTCAGACCATTTAGGGGGCTTATAATAGATGCAGCGATAAAGCCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCTTCAGTATCATTGTATGTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAACCGGGCCCCGGCACACGAAAGTCACATGGCTCCCCTGGGGGATCACAGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAAGAGGGAAGCAGAGAAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172298 370 + 60714840 AGGGCCCAGGT--GACGTCCTCACCTTTCACCAGCAGCTCCAGGTAGTCACTGTGCTCAGACCATCTGGAGGACTTAAAATAGAGGCAGCGATAACACCCAGCACTGTCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGAACTAGCTTGAGACACGTCATTAGTATCATTGTACTTGGATCTACTCTCCCTCTCCAGGCGGAATGTTTGAACCCCAGCCGGGCCCCGGCACACGAAAGTCACACGGCTTCCCGGGGGGATCGTGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAGAAGGGAAGCAGAGAAGGATCTCAGCGTCCACTGTAGGaagtcaccatgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917314 370 - 106955855 AGGGCCCAGGT--GACGTCCTCACCTTTCACCTGCAGCTCCAGGAAGTCACTGTGCCCAGACCATCTGGAGGACTTCAGATAGAGGCAGAAATAACGCCCAGCACTGTCTTCACTTACTGAGTCAACGTGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATTATTGGTATCACTGTACTTGGATCTACTCTCCGTCTCCAGGCGGAATGTCTGAACCCCAGCTGGGCCCCGGCACACGAAAGTCACATGGCTTCCCAGGGGGATCACAGTGCCTGGCTCGGCCAAGATGGAGGGTCTGGGCAGGGCCCCTAGGAGGGAAGCAGAGAAGGATCTCAGCGTCCACGGTAGGAAGTCACCACGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176280 370 + 64156825 AGGGCCCAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCTGGTGGACTTCACATAGAGGCAGCGATAATGTCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCGGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATTGGTCAACCCCAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACGGTGCCTGGCTCAGCTGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGTGTCCACTGTAGGAAGTCACCATGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276300 370 + 59248254 AGGGCCCAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCTGGTGGACTTCACATAGAGGCAGCGATAATGTCCGGCATTTCCTTCACTTACTGAGTCAATGCGGAATCTGGCCTCGGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATTGGTCAACCCCAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACGGTGCCTGGCTCAGCTGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCGTCCACCATAGGaagtcaccatgcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366309 370 + 51301725 AGGGTTCAGGT--GACACCCTCACCTTTTACCACCAGCTCCAGGTATTCACTGCCTGTAGACCATCGGTGGAGCTTATAATAGATGCAGCGATAATGCCCGGCGTTGCCTTCACTTACTGAGTCAATGTGGAATCTGGCCACTGACTCAGATGGACTAGCTTGAGACACATCACTAGTATCATTGTAGTCGTATATACTCTTCCCCTCCAGGCGGAATGTTTCAACCCGACCTGGGCCCCGGCACACGAAAGTCACAGGACTCCCCGGGGAGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCGTCCACCGTGGGAAGTCACCATGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47072418 370 + 50890351 AGGGTACAGGT--GACGTCCTCACCTTTCACCACCAGGTCCAGGTAGTCGCTGTGCTCAGACCATCCGGCGGAATTTACATAGATGCAGCGATAACGTCCGGCATTTCCTTCATTTACTGAGTCAATGCGGAATCTGGCCTCTGACTCAGATGGACTAGCTTGAGACACATCCTTAGTATCATTGAACTTGGATCTATCCTCCCTCTCCAGGCGGAATGTTTGAACCTGAACCGGGCCCCGGCACACGATAGTCACAGGCCTCCCCGGGGGGATCACAGTGCCTGGCTCAGCCGAGATGGAGGGTTTGGGCAGGGGCCCTAGGAGGGAAGCAGAGAAGGACCTCAGCATCCACCGTAGGAAGTCACCATGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594626 369 + 49145316 AGGGCCCAGGT--GGCGTCCTCACCTTTCACCACCAGCTCCAGCTGCTCACTGTGCTGAGACCATCTGGAGGCCTTATGATAGATGCAGCGATAATGCCCGGCGCTGTCCTCACTCACTGAGTCAATGCGGAATGTGGCCTCTGACAAAAATGGACTAACTAGAGACACATCATAATTATCTTTGTACTGGGCTCTATTCTCCCTCTCCAGGCGGAATTCGTGAACCCCAACTGGGCCCCGGCACACGAAAGTCACAGGGCTCCCCAGGGGGATCACGGTGCCTGGCTCAGCCGAGATGGAGGGTCTGGGCAGGGCCCCTAGGAGGGAAGCAGAGAAGGA-CTCAGTGTCCACTGTAGGAAGTCACCATGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19761867 360 - 122678785 AGGGCAGAGGTGAGATGTCCTCACCTGTCACCACCAGCTGCAGTTCCTTGCTGCGGTCAGACCAGGTGCCGTCTTTATTATAGAGGCAGCGATAGCGCCGGGCAGTGTCTTCACCCACCGCAGGGATGGGGAATCTGGCCTGCGTCTCATGTTG-------TGGG-----TTCCTCACATCTTTATGTAGAGCACTTCCCTCCTTCTCCAGGCGGAATGTCTCAGCCCCAGCAGGGCCCTGGCACACGATGGTCACCGGCTGCCCCCGGGGAATCTCAGAGCTCGGCTGGGCCCAGATGGAGGGGCTGGGCAGGACCCCTAGGAGGGAAGCAGAGCAGGTTCTTGGGGTCCGTTCTGAGGAGACAGCCTGTC i canFam3.chr1 I 5 I 904 a score=64890.000000 s hg38.chr19_GL949753v2_alt 343223 29 + 796479 acacacgtcattttagcatcacaat-----------------tcag s panTro4.chr19 59290240 29 + 63644993 acacatgtcattttagcatcacaat-----------------tcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172668 29 + 60714840 acacacgtcattttagcatcacaat-----------------tcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917684 29 - 106955855 ACACACATCATTTTAGCATCacact-----------------tcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176650 46 + 64156825 ACACGTGTCATTTTAGCATCACACTCATTTTAGCGTCACATGTCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276670 29 + 59248254 acacgtgtcattttagcgtcacact-----------------tcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47366679 29 + 51301725 ACATGTGTCATTTTAGTATCATACT-----------------TCAG i papAnu2.chr19 C 0 I 322 s chlSab2.chr6 47072788 29 + 50890351 ACACGTGTCATTTTAGCATCACACG-----------------TCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45594995 25 + 49145316 ACA--TGTCATTC--GCATCacaat-----------------tcag i calJac3.chr22 C 0 C 0 e canFam3.chr1 19762227 904 - 122678785 I a score=1590270.000000 s hg38.chr19_GL949753v2_alt 343252 550 + 796479 ggattttagcaattttatagagttatgcagccatgaccacagcccaaccttagaacattcccaAGCCTCCTGCACCTTCTACGTGCATGTG-ATTCTCATCACTGCAGAGTt-ttttcccagttgacagtgaggaccctgagacttgctcacaacttgggccttgctcagggtcatgtgggaagtgtcggagcagcctggagcccttcatgcctgctgcagagcccagggccactttccaGAGGGACAGAGTGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTGGTGAAGGACAAGGGACAGAGAAGCGAGGGCTCTGGAGATGGCTTGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTTTGAGGGTCTGGT-GGGGTGAGGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTCTATAGTTTCTACTTTCTTC s panTro4.chr19 59290269 550 + 63644993 ggattttagcaattttatagagttatgcagccatgaccacagcccaaccttagaacattcccacacctccTGCACCTTCTACGTGCATGTG-ATTCTCATCACTGCAGAGTt-ttttcccagttgacagtgaggaccctgagacttgctcacaacttgggccttgctcagggtcacgtgggaagtgtcggagcaggctggggcccttcatgcctgctgcagagcccagggccactttccaGAGGGACAGAGTGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTTGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGATGGGGGTTGCCAGGCTCCTTTGAGGGTCTGGT-GGGGTGAGGGTGAAG-CCCCCAG-----------CCCTGATATGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTCTATAGTTTCTACTTTCTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56172697 549 + 60714840 ggattttagcaattttatagagttatgcagccacgaccacagcccaaccttagaacattcccacgcctccTGCACCTTCTACGTGCATGTG-ATTCTCGTCGCTGCAGAGTt-ttttcccagttgacagtaaggaccctgagacttgctcacaactagggacttgctcagggtcacgtgggaagtgtcggagcagcctggggcccttcatgtgtgctgcagagcccagggccactttccCGAGGGACAGAGGGTGGGAGGGAGGCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTTTGAGGGTCCAGT-GGGGTGAAGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCATGACAGGTCCCCATTGCTAATGCAGATCTCTGTGGAGACACCACCTCTGGGTTTTCCTC-ATAGTTTCTACTTTCTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102917713 551 - 106955855 ggtttttggcaattttatagagttatgcagccacgaccacagcccaaccttagaacattcccaCGCCTCCTGCACCTTCTACGTGcatatg-atcctcatcgctgcagagttcttttcccagttgacagtaaggaccctgagacttgctcacaatttgggtcttgctcagggtcacgtgggaagtgtcggagcagcctggggcccttcatgtctgctgcagagcccagggccactttccagagggacggagggtgggagggaggCACAGGATGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGAAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGCACGAGGGTTCCCAGGCTCCTGTGTGGGTCCGAT-GGGGCGAGGGTGAAGCCCCCCAG-----------CCCTGATCTGCTCACAGCGGATGCCCAGCCCGTGACAGGTCCCCGCTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTT-ATAGTTTCTACTTTCTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60176696 559 + 64156825 GGATTTTAGCAATTTTGTAGAGTTGTGCAGCCACGACCACAGCCCAACCTTAGAACATCGCCAGGCCTCCTGCACCTTCTACGTGTGCGGGAATCCTCATCGGTGCAGAGTTATTTTCCCAGTTGACAATAAGGACCCCGAGACTTGCTCACAACTTGGGCCTTGCTCAGGGTCACGTGGGAAGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGGGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCCCTGACCCAGCCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55276699 558 + 59248254 ggattttagcaattttgtagagttgtgcagccacgaccacagcccaaccttagaacatCGCCAGGCCTCCTGCACCTTCTACGTGTGCGGGAATCCTCATCGGTGCAGAGTTATTTTCCCAGTTGACAATAAGGACCCCAAGACTTGCTCACAACTTGGGCCTTGCTCAGGGTCACGTGGGAAGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA--GGGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGGACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGAAGGGCACTGGCCGGTCCCCGGGGGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCCCTGACCCAGCCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367030 548 + 51301725 ggattttAGCAATTTTATAGAGTTGTGCAGCTACGACCGCAGCCCAACCTTAGAACGTTGCCACGCCTCCTGCACCTTCTACGTGCGCGGGAATCCTCATCGGTGCAGA-TTATTTTCCCAGTTGACAATAAGGACCCTGAGACTTGCTCACAACGT-GGCCTTGCTCAGGGTCACGTGGGAGGTGTCGGAGCAGCCTGGGGCCCCTCATGTCTGCCG-AGGGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGAGGCACAGGACGGCGATGACAGGGTCATTCGTGAAGGACAAGGGACAAGGGAGCGAGGGCTCTGAAGATGGCTCGTGCTGGGGCCTGACAGGTATTGGCCGATCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAGGGTGAAG-CCCCCAGCC---------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCATTGCTAATGCAGGTCTCTGTGGAGACACCGTCTCTCGGTTTTCCTC--tagtttctcctttctcc i papAnu2.chr19 I 322 C 0 s chlSab2.chr6 47072817 547 + 50890351 GGATTTTAGCAATTTTGTAGAGTTGTGCAGCCACGACCACAGCCCAGCCTTAGAACGTTGCCAGGACTCCTGCACCTTCTACGTGTGCAGGAATCCTCATCGGTGCAGAGttattttcccagttgacaataaggaccccgagacttgctcacaactt-ggccttgctcagggtcacatgggaagtgtcggagcAGCCTGGGGCCCCTCATGTCTGCTG-AGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGCGGGA-GGAGGCACAGGACGGGGATGACAGGGTCATTCGTGAAGCACAAGGGACAGGGGAGCGAGGGCTCTGGAGATGGCTCGTGCTGGGGCCTGACGGGCACTGTCCGGTCCCCGGGTGGGACTGAGTGTGGGACGGGGGTTGCCAGGCTCCTGTGAGGGTCCGAT-GGGGTGAAGGTGAAG-CCCCCAG-----------CCCTGATCTGCTCACAGCAGATGCCCAGCCCGTGACAGGTCCCCACTGCTAATGCAGGTCTCTGTGGAGACACCACCTCTGGGTTTTCCTC--TAGTTTCTACTTTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595020 548 + 49145316 ggtttttagcaaatttatacagttatgcagccgcaaccacagcccaactttagatcatttcc-CGTCTCCTGCACCTTCCACCTGCGTGTCAATTCTCATCGCTGCGGAGTTATTTTCCCAGTGGACACTAAGGACCCTGAGACTTGCTCACAGCTTGAGCCTCGCTCAGGGTCACGTGGGAAGAGTCAGAGCGGCCTGGGGCCCTTCGTGTCTGCTGCAGAGCCCAGGGCCACTTTCCAGAGGGACAGAGGGTGGGAGGGAGGCACAGCATGGGGATGACACCGTCACTTGTGAAGGACAGGGGACAGGGAAGTGAGAGTTCTGGAGATGACAGGTGCTGGGGCCCGAAGGGCACTGGCCAGT-CCCGGGTGGGACTGAGTGTGGGATGGGGGTTGCCAGGCTCCTGTGAGGGTCTGGTGGGGGGGAGGGGGAAG-CCCCCAG-----------CCCTGATCTGCTCGAAGCA---GCCCAGCCCGTGACAGGTCCCCGCTGCTAATGCAAGTCTCTGTGGAGCCACCACCTCTGGGTTTTCCTGTAAAGTTTCTGCTGTCTTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19762227 904 - 122678785 I a score=672640.000000 s hg38.chr19_GL949753v2_alt 343802 218 + 796479 TCAGCCTAATTTGCATTTCCTTCTTATTAAGGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCGTCCCGTCTTCATTCATTCCTTATTattgacaaattaaaactgca s panTro4.chr19 59290819 218 + 63644993 TCAGCCTAATTTGCATTTCCTTCTTATTAAGGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCGTCCCGTCTTCATTCATTCCTTATTattgacagattaaaactgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173246 218 + 60714840 TCAGCCTAATTTGCATTTCCTTGTTATTAAGGCTCTTGAAAACCCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTA-AAACAGG-AAGGTTATGTCAAAATTAGCAAAATCCCTGAGCGGGGCAGAGAGCTGGCAGGGCTTCAAGTCACTCATCCCATCTTCAtttattctttattattgacaaattaaaactgca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918264 218 - 106955855 TCAGCCTAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCATTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGAAGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCACTCATCGCGACTTCAATCATTCCTTATTattgacaaattaaaactgca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177255 216 + 64156825 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCATTTATCCCAACTGGGCTTGGGGTG--GGAGGAAGGGCAGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCGAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAGTTCGCTCATCCCATCTTCATTCAttctttgttattgacagattaaaactgca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277257 218 + 59248254 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCTGTTTATCTCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCGCTCATCCCGTCTTCATTCAttctttgttattgacagattaaaactgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367578 216 + 51301725 tcagccgaatttgcatttccttgttaTTAAAGCTCTTGAAAAACCCCATTTATCTCAACTGGgcttggggtg--ggaggaagggcgGGTTTGATGCCCTG-AAACAGG-AAGGTTGTGTCAAAATTAGCAAAATCCCTGAGCAGGGCAGAGAGCTGGCAGGGCTTCAATTCGCTCATCCCgtcttcattcattctttgttATTGACAGATTAAAACTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073364 218 + 50890351 TCAGCCGAATTTGCATTTCCTTGTTATTAAAGCTCTTGAAAAACCCCGTTTATCCCAACTGGGCTTGGGGTGGAGGAGGAAGGGCGGGTTTGACGCCCTG-GAACAGG-AAGGTTGTGTCAAAATTAGCGAAGTCCCTGAGCAGGGCAGAGAGCTGGCGGGGCTTCCGTTCGCTCGTCCCGTCTTCATTCATTCTCTGTTCCGgacagattaaaaccgca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595568 215 + 49145316 TCAGCCTAATTTGCATTTCTTTGTTATTAAGGCTCTTGGAAAACCTCATTTGTCT---CTGGGCTTGGGGTGGAGGAGGAAGGGTGGGTGTGAAACCCTA-AAACAGGAAAAGTTGTTTGAAAATCAGCAAAATCCCTGACCAGGACAGAGAGCTGGCAAGCCTTCAATTCGCTCCTC-CGTGCTTTCTCAttctttatgatcgacaaatcaaaactgca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763131 169 - 122678785 tcagccttaTTTCTACTTCCTTGTTTGTAACGCTCCTAAAAACCCCCGTCTGCCTCAGCTAGGCTGGCGGTGGAGGAAGAGGGGT---TTTGTAGTCCTGAAAACAGG-AAGGCAGCATCAAAGTTA-CAAAATCCCTCAggtg--------------------------------------------ttatgctatat-gttggcaaatt-gaactcca i canFam3.chr1 I 904 I 133 a score=494518.000000 s hg38.chr19_GL949753v2_alt 344020 195 + 796479 tgtatttaaggtgtacaacatgatgttttgatacaggtatacactgtggaatcgctgaatcaagctaattaatataacctcactttgcgtagttaattgttgtggtgagaacatttaaaatctgccctcttagtgattttcaagcatatgatacattgtgattaactctagtcattgtgttgcacaatcctgaac s panTro4.chr19 59291037 195 + 63644993 tgtatttaaggtgtacaacatgatgttttgatacaggtatacactgtggaatcgctgagtcaagctaattaatataaccttactttgcgtagttaattgttgtggtgagaacatttaaaatctgccctcttagcgattttcaagcgtaggatacattgtgattaactctagtcattatgttgcacaatcctgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173464 195 + 60714840 tatatttaaggtgtacaacatgatgttttgatatagatatacactatggaatcgctgaatcaagctaattaatacaaccttactttgcgtagttaattattgtggtgagaacatttaaaatctgccctcttagcgattttcaagcatacgatacattgtgatttactctagtcattatgctgcacaatcctgaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918482 195 - 106955855 tatgtttaaggtgcacaacgtgatattttgatatgggtatacactgtggaatcgctgaatcaagctaattaatataacctcactttgcctagttaatggttgtggtgagaacatttaaaatctgccctcttagccattttcaagcatacgatacattgtgattaactctagtcatcatgttgcacaatcctgaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177471 194 + 64156825 tatattgcaggtgtacaacatgatgtgttggtacagatacacactgtggactcgctgaatcaagctaattcatataactttactttgcatagttaatttttgtggtgagaacatttaaaatctg-cctcttagtgattttcaagcatacaatacattgtgattaactctaatccttatgttgcacaatcctgaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277475 184 + 59248254 tatattgaaggtgtacaacatgatgtgttggtacagatacacactgtggactcgctgaatcaagctaattcatataaccttactttgca----taatttttgtggtgagaacatttaaaatctg-cctcttagcgattttcaagcatacgatacattgtgat------taatccttatgttgcacaatcctgaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367794 188 + 51301725 TATATtgaaggtgtacaacatgatgtgtCGGTACAGATATACACTGTGGAATCGCTGAATCAAGCTAATTCATATAACCTTACTTTGCATAGTtaatttttgtggtgagaacatttaaaatctg-ccTCTTAGAGATTTTCAAGCATACGATACATTGTGAT------TAATCCTTATGTTGCACAATCCTGAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073582 194 + 50890351 tatgctgaaggtgtacaacatggtgcgttggtacagatacacgctgtggactcgctgaatcgagctaattcatataaccttactttgcagagttaatttttgtggtgagaacatttaaaatctg-cctcttagcgatttgcaagcatacgatacattgtgattaactctagtccttatgttgcacaatcctgaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45595783 186 + 49145316 tctatgtcaggtccgcaacatgacgttttgatacaggtatacattgtggagtggctgaatcaggctaattagtataaccttagtttgcatagct--ttttcgcggtgagaacatttcaaatctgccctcttagcg------gagcatgcaacacattgtgattga-tccagtcaccacgtggcaccatcctcaac i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763300 133 - 122678785 I a score=761456.000000 s hg38.chr19_GL949753v2_alt 344215 243 + 796479 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGATGCCTGCCGTTTGGAGGTGGACTTCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCAGCTG s panTro4.chr19 59291232 243 + 63644993 ttactctccctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGGGCTGCTAATTCCCCAAATGTGAGAAACACACACAGGATGCCTGCCCTTTGGAGGTGGACTTCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173659 243 + 60714840 ttactcttcctgtctagatgaaattttctatcctttaaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCTGTTTAAAGACGTTTTTCATGAGCTGCTAATTCCACAAATGTGAGAAACACACACAGGATGCCTGCCCTTTGGAGGTGGACATCCAGAAGGGAGGACCGGTATTGATCAAAGAATTGTCCAAATCTGCATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918677 243 - 106955855 ttactcttcctgtctagacgaaattttctatcttttgaccagcatctccccaaacccgcccattTGTTCATTTTTCTTTCTTTTAACCGTATCTCAGTTACTTATCAATCTATTTAAAGACGTTTCTCATGGGCTGCTAATTTCACAAATGTGAGAAACACACACAGGATGTCTGCCCTTTGGAGGTGGACATCCAGAAGGGAGGACAGATATTGATCGAAGAATTGTCCAAATCTGCAGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177665 242 + 64156825 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaACTCACCCATTTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCCGTTTAAAGATGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGCGAGGACAGATACTGCTCCGAGAATTGTCC-AAACTGCAGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277659 242 + 59248254 ttactcttcctgtctagacgaaattttctatcctttgaccagcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTTACTTATCAATCCGTTTAAAGATGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACACAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGCGAGGACAGATACTGCTCCGAGAATTGTCC-AATCTGCAGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47367982 243 + 51301725 TTACTCTTCCTGTCTAGATGAAATTTTCTATCCTTTGACCTGCATCTCCCCAAACCcacccatttgttcatttttctttcttttaaccaTATCTCAGTTACTTATCAATCCGTTTAAAGACGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACAGAGGGTGCCTGCCCTTTGGAGGTGGACATCTAGAAGGGAGGACAGATACTGCTCGGAGAATTGTCCAAATCTGCAGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47073776 242 + 50890351 ttactctccctgtctagatgaaattttctatcctttgacctgcatctccccaaacccacccattTGTTCATTTTTCTTTCTTTTAACCATATCTCAGTGACTTATCAATCCGTTTAAAGACGCTTTTCATGGGCTGCTAATTCCACAAATGTGAGAAACACACAGAGGGTGCCTGCCCTTTGGAGGTGGACGTCTAGAAGGGAGGACAGATACTGCTCGGAGAATTGTCC-AATCTGCAGCTG i chlSab2.chr6 C 0 I 85 s calJac3.chr22 45595969 240 + 49145316 ttactccccctatctagctgaaattttgtatccttctgc---catctccccaaacccacccatttgtccatttctcgttcttttaaccatATCTCAGTTGCTTGTCAATCTGTTTAAAGACACTTTTCATGGGCTGCTGTTTCCACAAACGTGAGAGACACACACAGGATGCCCGCCCTTGGGCGGTGGACGTCTAGAAGGGAGGACAGAGACTGATGGAAGAATTGTGCAAAGCTGCAGCTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763433 242 - 122678785 ttcttctttctttctccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttccttcTACTGTATTTTAGC-ATCTATGTATCCATGTACAGATGCTCTccatgtgccactggttctacaaacatgagaaacacactcatgatccctgccttctcggggctgagagtattgagggaggacagacactcatcaaatacttgtctgagtccacagatg i canFam3.chr1 I 133 C 0 a score=18205.000000 s hg38.chr19_GL949753v2_alt 344458 6 + 796479 TGAACT s panTro4.chr19 59291475 6 + 63644993 CGAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173902 6 + 60714840 TGAACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918920 6 - 106955855 TGAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177907 6 + 64156825 TGAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277901 6 + 59248254 TGAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368225 6 + 51301725 CAAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3689488 6 - 50890351 CGAACT i chlSab2.chr6 I 15160 C 0 s calJac3.chr22 45596209 6 + 49145316 TGAACT i calJac3.chr22 C 0 I 1352 s canFam3.chr1 19763675 6 - 122678785 cagact i canFam3.chr1 C 0 C 0 a score=4500.000000 s hg38.chr19_GL949753v2_alt 344464 1 + 796479 g s panTro4.chr19 59291481 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173908 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918926 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177913 1 + 64156825 G i rheMac3.chr19 C 0 I 73 s macFas5.chr19 55277907 1 + 59248254 G i macFas5.chr19 C 0 I 78 s papAnu2.chr19 47368231 1 + 51301725 G i papAnu2.chr19 C 0 I 77 s chlSab2.chr6 3689494 1 - 50890351 G i chlSab2.chr6 C 0 I 833 s calJac3.chr22 45597567 1 + 49145316 g i calJac3.chr22 I 1352 C 0 s canFam3.chr1 19763681 1 - 122678785 g i canFam3.chr1 C 0 I 146 a score=236455.000000 s hg38.chr19_GL949753v2_alt 344465 315 + 796479 acagagtcttgc-tctgtcacccaggatggagtgcagtggcgcaatctcagctcactgcaacctccgcctccaaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggtgcactccaccacgcccagctaatttttgtatttttagtagagacggggttt-cccccatgttgtccaggctggtctcaaacttctgacctcaagtgatccacccacctccgcctcccaaagtgctgggattacagatgtgagccaccgcacccagccTCATTGGTCATTTTTAAAATG-AATTATTTTTTTTC s panTro4.chr19 59291482 314 + 63644993 acagagtcttgc-tctgtcacccaggatggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattcttctgcctcagcctcctgagtagctgggattacaggtgcactccaccacgcccagctaatttttgtatttttagtagagacggggttt-cccccatgttgtccaggctggtctcaaacttctgacctcaagtgatccgcccccctcggcctcccaaagtgctgagattacagatgtgagccaccgcgaccagccTCATTGGTCATTTTTAAAATG-AATTA-TTTTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56173909 315 + 60714840 acagagtcttgc-tctgtcgcccaggatggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggtgcacaccaccacgcccagctaatttttgtatttttagtagagacggggtttccccccatgctggccaggctggtctcaaactcccgacctcaagtgatccgcccccctcggcctctcaaagtgctgggattacagacgtgagccaccgcgcccagccTCATTGGTCATTTTTAAAATG-AGTTA-TTTTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102918927 315 - 106955855 acagagtcttgc-tctgtcggccaggctggagtgcagtggcatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggtgcacaccaccatgcccagctaatttttgtatttttagtagagatggggttt-cccccatgttggccaggctggtctcaaactcccgacctcaagtgatccgcccccctcggcctcccgaaatgctgggattacagacgtgagccactgcgcccagccTCATTGGTGATTTTTAAAATGAAATTA-TTTTTTTC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45597568 296 + 49145316 acagagtttcacttttgttacccaggctggagtgcgatggcgccatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaattattgtatttttagtagagacggggttt--caccatgttgaccaggatggtctcgatctcttgacctc--gtgatccacccgcctcagcctcccaaagtgctgggattataggggtgagccacctcgccgggcc--------------CAAAATG-GATTT-TTTTTT-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763682 146 - 122678785 I e chlSab2.chr6 3689495 833 - 50890351 I e papAnu2.chr19 47368232 77 + 51301725 I e macFas5.chr19 55277908 78 + 59248254 I e rheMac3.chr19 60177914 73 + 64156825 I a score=58037.000000 s hg38.chr19_GL949753v2_alt 344780 38 + 796479 AAAATCAGCATGTGAGAAGAACCACCATATTGAGCGGC s panTro4.chr19 59291796 38 + 63644993 AAAATCAGCATGTGAGAAGAACCACCATATTGAGCGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174224 38 + 60714840 AAAATCAGCATGTGAGAAGACCCACCATATTGAGCGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919242 38 - 106955855 AAAATCAGCATGTGAGAAGGCCCACCATATTGAGCGGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3818743 36 - 59248254 aaaaTCAGCATGTGAGATGGCCTG--ATGTTGAACAGA i macFas5.chr19 n 78 C 0 s papAnu2.chr19 3787314 36 - 51301725 aaaatcagcatgtgAGATGGCCTG--ATGTTGAAGAGA i papAnu2.chr19 I 9021 C 0 s calJac3.chr22 45597864 35 + 49145316 -AAATCGGCATGTGAGACAGCCCA--ATATTGAACAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763828 36 - 122678785 aaaatcagtgtgtgaggaggtcca--gagttgaagggg i canFam3.chr1 I 146 C 0 e chlSab2.chr6 3689495 833 - 50890351 I e rheMac3.chr19 60177914 73 + 64156825 I a score=8907.000000 s hg38.chr19_GL949753v2_alt 344818 4 + 796479 ATAT s panTro4.chr19 59291834 4 + 63644993 ACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174262 4 + 60714840 ATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919280 4 - 106955855 ATAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3835480 4 - 64156825 ATAT i rheMac3.chr19 I 3368 C 0 s macFas5.chr19 3818779 4 - 59248254 ATAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3787350 4 - 51301725 ATAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45597899 4 + 49145316 ATAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763864 4 - 122678785 aaat i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3689495 833 - 50890351 I a score=171276.000000 s hg38.chr19_GL949753v2_alt 344822 56 + 796479 -GGAGTGTTTGAGAAAGCGAAAGAACCTGGAGGAATGTAGAGATGAGTGAGCCCCAG s panTro4.chr19 59291838 56 + 63644993 -GGAGTGTTTGAGAAAGCGAAAGAACCTGGAGGAATGTAGAGATGAGTGAGCCCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174266 56 + 60714840 -GGAGTGTTTGAGAAAGCGAAAGAAGCTGGAGGAATGTAGAGACGAGTGAGCCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919284 56 - 106955855 -GGAGTGTTTGAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3835484 56 - 64156825 -GGAGTGTTCAAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i rheMac3.chr19 C 0 I 5522 s macFas5.chr19 3818783 56 - 59248254 -GGAGTGTTCAAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3787354 56 - 51301725 -GGAGTGTTTGAGAAAGTGAAAGAACCTGAAGGAATGTAGAGATGGGTGAGCCCAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3690328 56 - 50890351 -GGAGTGTTTGAGAAAGTGAAAGAACCTGGAGGAATGTAGAGATGGGTGAGCCCAAA i chlSab2.chr6 I 833 C 0 s calJac3.chr22 45597903 55 + 49145316 -GGAGTGTTTGAGAAAGTGAAAGCAGCTGGAAG-ATGTAGAGATGAGTGAGCCCGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763868 47 - 122678785 ggtgttttttgagaaa--gaaaga----tgaggtatctggaggtaagtgagct---- i canFam3.chr1 C 0 C 0 a score=13752.000000 s hg38.chr19_GL949753v2_alt 344878 4 + 796479 GTCA s panTro4.chr19 59291894 4 + 63644993 GTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174322 4 + 60714840 GTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919340 4 - 106955855 GTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177987 4 + 64156825 GTCA i rheMac3.chr19 I 73 C 0 s macFas5.chr19 3818839 4 - 59248254 GTCA i macFas5.chr19 C 0 I 8331 s papAnu2.chr19 3787410 4 - 51301725 GTCA i papAnu2.chr19 C 0 I 5657 s chlSab2.chr6 3690384 4 - 50890351 GTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45597958 4 + 49145316 GTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763915 0 - 122678785 C a score=3600.000000 s hg38.chr19_GL949753v2_alt 344882 1 + 796479 C s panTro4.chr19 59291898 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174326 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919344 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177991 1 + 64156825 C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277986 1 + 59248254 C i macFas5.chr19 I 78 C 0 s papAnu2.chr19 47368309 1 + 51301725 C i papAnu2.chr19 I 77 C 0 s chlSab2.chr6 3690388 1 - 50890351 C i chlSab2.chr6 C 0 T 3677 s calJac3.chr22 45597962 1 + 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 19763915 0 - 122678785 C a score=485841.000000 s hg38.chr19_GL949753v2_alt 344883 168 + 796479 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA-----AAAAAGATTTCATCTTACG-----------ATGAGATATTAAATGAAAATTTTTGAATACAATTTAAAAACTGT s panTro4.chr19 59291899 160 + 63644993 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCCTGGATCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTAAGAAAAAAAA-------------TTCATCTTACG-----------ATGAGATATTAAATGACAATTTTTGAATACAGTTTAAAAACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174327 172 + 60714840 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCGAGACCAAAGAGAGGTACACGGGTCTGATTCTATGTGAAGATAAACAGGGGAAGGGTTCTGAGAAGAAAAA-AAAAAAAAAGATTTCATCTTACA-----------ATGAGATATTAAGTGAAAATTTTTTAATACAATTTAAAAACTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919345 173 - 106955855 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTGCACGGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTaagaaaaaaaaaaaaaaaaaaGATTTCATCTTACA-----------ATGAGATGTTAAATGAAAATTTTTGAATACAGTTTAAAAACTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60177992 161 + 64156825 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATAGTAAATGAAAATTTTTGAATACAATTTAAAAACTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55277987 161 + 59248254 AGGGACAGGATGTGGCTGGGAAAATGGGCATGTCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATAGTAAATGAAAAATTTTGAATACAATTTAAAAACGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368310 160 + 51301725 AGGGACAGGATGTGGGTGGGAAAATGGGCAGGTCCAGACCAAAGAGAAGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCtctgag-aaaaaaa------------tttcatcttaca-----------atgagatattaaatgaaaaatttttaatacaatttaaaaacggT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074103 161 + 50890351 AGGGACAGGATGTGGGTGGGAAAATGGGCATGCCCAGACCAAAGAGAGGTACACAGGTCTGATTCTATCTGAAGATAAACAGGGGAAGGGCTCTGAGAAAAAAAA------------ATTCATCTTACA-----------ATGAGATATTAAATGAAAAATTTTGAATACAATTTAAAAACGGT i chlSab2.chr6 I 85 C 0 s calJac3.chr22 45597963 165 + 49145316 AGGGACAGGATGTGGCTGGAAAAACCAGCATGTCCAGACCAGAGAGAGGGGCGTGGGTCTGATTCTACCTGAAGATAAACAGAGGAAGGGCTCTGAGGAAAAAAG--------GATGTTTAACCTTACA-----------ATGAGATATTAAAAGAAAAATTTTGAACACAATTTAAAAATTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19763915 163 - 122678785 --ggacag--------tgtgaggatggacagatctagaccaaagagcagttcgtgGGTCTTATTTGATCTGAGCAGAGATGATGAAAGGACTCTAAAAATCTAAT-----------ATTTTGCCCCAAATAGAAAAAAATATGAAAAATAAATTCCAAAAATGTGAGTGAAATTTTAAAATTAT i canFam3.chr1 C 0 I 20 a score=588130.000000 s hg38.chr19_GL949753v2_alt 345051 208 + 796479 GGAAAGTACAATGGTCATGGTTGTGCTTTTGCAAATCGCCA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGCAATGGACAGGCTGAGGCCGGCCTCGGGCAGCCACGGAGGGGAGAGGGGCTGTCACCTGGGGGTGATGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAATTTAGAGTGAAATCACCAGGACTG s panTro4.chr19 59292059 207 + 63644993 GGAAAGTACAATGGTCATGGTTGTGCCTTTGCAAATCGCCA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGC-ATGGACAGGCTGAGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGGGGCTGTCACCTGGGTTTGATGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAGTTTAGAGTGAAATCACCAGGACTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174499 207 + 60714840 GGAAAGTACAATGGTCATGGTTGTGCTTTTGCAAATCGCCG-GTCCCTGGGGTCAGGAACGGAGCAGGCAGCAGTGGC-ATGGACAGGCTGAGGCCGGCCTCGGGGAACCACGGAATGGAGAGGGGCCGTCACCTGGGGATGACGCAGGAAAAGTCGATGAAGAGAGAGGGAAAGATGAGAAAAATGTAGAGTGAAATCGCCAGGACTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919518 207 - 106955855 GGAAGGTACAATGGTCATGGTTGTCCTTTTGCAAATCACAA-GTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGC-ATGGACAGGCTGAGGCCGGCCTCGGGGAGCCATGGAGGGGACAGGGGCCGTCACCTGGGGGTGACGCAGGAAAAGTTGATGAACAGAGAGGGAAAGGTGAGAAAAATTTAGAGTGAAATCACCAGGACTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178153 208 + 64156825 GGAAAGTACAATGGTCATGTCTGTGCTTTTGCAAATCACAGCGTCCCTGGGGTCAGGAAGGGAGCAGGCAGCAGTGGT-ATGGACAGGCTGCGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGCGGCCACCACTGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAACTGAGAGTGAAATCACCAGGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278148 208 + 59248254 GGAAAGTACAATGGTCATGTCTGTGCTTTCGCAAATCACAGCGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGT-ATGGACAGGCTGCGGCCGGCCTCAGGGAGCCACGGAGGGGAGAGCGGCCACCACTGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAACTGAGAGTGAAATCACCAGGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368470 208 + 51301725 GGAAAGTACAATGGCCATGTCTGTGCTTTCGCAAATCGCAATGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGT-ATGGACAGGCTGCGGCCGGCCTCAAGGAGCCACGGAGGGGAGAGCGGCCACCACTTGGGGGAGACACAGGAAAAGTCaatgaagagagagggaaagatgagaaaaactgaGAGTGAAATCACCAGGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074264 208 + 50890351 GGAAAGTACAATGGTCATGTCTGTGCTTTCGCAAATCACAACGTCCCTGGGGTCAGGAAGGGAGCGGGCAGCAGTGGC-ATGGACAGGCTGAGGCCGGCCTCGGGGAGCCACGGAGGAGAGAGCAGCCGTCACCGGGGGGAGACACAGGAAAAGTCAATGAAGAGAGAGGGAAAGATGAGAAAAATTGAGAGTGAAATCACCAGGACTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598128 208 + 49145316 GGATGGTACAATGGTCATGTTTGTGCTTTCTCAAATCACAGTGTCCCCAGTGTCAGGAAGGGAGCGGGCAGCCGGGGC-ATGGACAGGCTGAGGCCGGCCTCGGGGAGCCGCGGAGGGGAGAGGTGCGGTCACTTGGGGCGGATGCAGGAAAAGTACATGAAGAGAGAGGGAAAGATGAGAAAAATCTGGAGTGAAATCACCAGGACTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19764078 20 - 122678785 I a score=406956.000000 s hg38.chr19_GL949753v2_alt 345259 138 + 796479 GGTGACATG--GTGCATCCAGGAGGA---TGGAGAAGAGGATGAGTGTTCAGAGTCTGCCCTTTGTGACTGTCACGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGTGCCGGGCTCAGCCTTG s panTro4.chr19 59292266 137 + 63644993 GGTGACAGG--GTGCATCCAGGAGGG---TGGAGAAGAGGATGAGTGTTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCATCT-GGGAAAAGTGCCGGGTTCAGCCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174706 138 + 60714840 GGTGATATG--ATGCATCTAGGGGGA---TGGAGAAGAGGATGAGTGCTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGTGCCGGGCTCAGCCTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919725 133 - 106955855 GGTGACATG--ATGCATCTAGGA--------GAGAAGAGGATGAGTGTTCAGAGCCTGCCCTTTGTGACTGTCATGTTCCCTGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTCGTCTGGGGAAAAGAGCCGGGCTCAGCCTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178361 138 + 64156825 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCGTGTTCCCCACCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGCCGGGCTCAGCCTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278356 138 + 59248254 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCGTGTTCCCCACCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGTCGGGCTCAGCCTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368678 137 + 51301725 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGGTGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCCTGTTCCCCGCCAAGAAGCTGCCGAGTGAAGTG--TGGGCTGGTCTGGGGAAAACTGCTGGGCTCAACCTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074472 138 + 50890351 GGTGACATG--ATGCATCTAGGAGGA---TGGAGAAGAGATGGAATGTTCAGAGTCTGCCCTTTGTGACTGTCATGTTCCCTGCCAAGAAGTTGCCGAGTGAAGTG--TGGGCTGGTCTGGGAAAAACTGCTGGGTTCAACCTTG i chlSab2.chr6 C 0 I 326 s calJac3.chr22 45598336 138 + 49145316 GGTGACAGG--ATGCATCTAGGAGGA---TGGAGAAGAGGATGAGTCTTCAGAGTCTGCCCTTGGTGACTGTTGTATTCCCCGCCAAAGGGCTGCTGAGGGAAGCG--TGGGCTCATCTGGGGAAAGCTCCCGGGCTCAGCCTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764098 139 - 122678785 GGTGATGTGTTTTGTATCGAGGATGAAGTTGGGATCAAGGATGGTGTCTGGGACTTGGCACTTGACGACT---CTGCTCTCTGCCAAGGGGATGCTGAGAGGGGGGTCTGGGCTTGTGTGGG--AGAGCCCTGGGCTCAGCCTG- i canFam3.chr1 I 20 C 0 a score=5082.000000 s hg38.chr19_GL949753v2_alt 345397 3 + 796479 GTT s panTro4.chr19 59292403 3 + 63644993 GTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174844 3 + 60714840 GTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919858 3 - 106955855 GTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178499 3 + 64156825 GTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278494 3 + 59248254 GCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368815 3 + 51301725 TTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45598474 3 + 49145316 GTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764237 3 - 122678785 GTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47074610 326 + 50890351 I a score=34405.000000 s hg38.chr19_GL949753v2_alt 345400 11 + 796479 GTGTTGGGTTT s panTro4.chr19 59292406 11 + 63644993 GCGTTGGGTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174847 11 + 60714840 GTGTTGGGTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919861 11 - 106955855 GTGTTGGGTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178502 11 + 64156825 GTGTTGGGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278497 11 + 59248254 GTGTTGGGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47368818 11 + 51301725 Gtgttgggttt i papAnu2.chr19 C 0 I 320 s chlSab2.chr6 47074936 11 + 50890351 GTGTTGGGTTT i chlSab2.chr6 I 326 C 0 s calJac3.chr22 45598477 11 + 49145316 ATGTTGGATTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764240 11 - 122678785 CTGCACAGTTC i canFam3.chr1 C 0 C 0 a score=17856.000000 s hg38.chr19_GL949753v2_alt 345411 5 + 796479 GAATT s panTro4.chr19 59292417 5 + 63644993 GAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174858 5 + 60714840 GAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919872 5 - 106955855 GAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178513 5 + 64156825 GAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278508 5 + 59248254 GAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369149 5 + 51301725 GAATT i papAnu2.chr19 I 320 C 0 s chlSab2.chr6 47074947 5 + 50890351 GAATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598488 5 + 49145316 GAATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764251 5 - 122678785 TAATT i canFam3.chr1 C 0 I 25 a score=767772.000000 s hg38.chr19_GL949753v2_alt 345416 284 + 796479 CTCATTGTGgaaatcggtgtgcggagctgacccctgcactcccagggtgaccgcagcgctactcacagccgccaagacctggcaagaacctgag-----tgcccaccaccaaatgaatggatgaggagaatgtgctgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggatgaacca------------------------------------------------gaggacgttaggctaagtgaaataagccgggcacagaaagaca---attactgcgcgttctcacttatctgtggaatct s panTro4.chr19 59292422 289 + 63644993 CTCATTATGgaaatctgtgtgtggaggtgacgcctgcactcccagggtgaccgcagcgctactcacagctgccaagacctggaaataacctgagttatataaccaccaccaaatgaatggatgaggagaatgtgctgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacagcatggatgcacca------------------------------------------------gaggacattatgctaagtgaaataagccgggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56174863 283 + 60714840 CTCATTGTGgaaatcggtgtgtggaggtgacacctgcactcccagggtgaccgcagcgctacttacagccaccaagatctggaaataa-ctgag-----tgtccatcaccaaatgaatggatgaggagaatgtagtgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggataaacca------------------------------------------------gaggacgttaggctaagtgaaataagccaggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102919877 337 - 106955855 CTCATTGTGgaaataggtgtgtggaggtgacacctgcactcccagggtgaccgcagcgctactcacagccgccaagacctggaaataacgtgagttatataaccaccaccaaatgaatggatgaggagaatgtggtgtgtatatgcaatggaatattattcagccctaaaaaaggaaggacattctgtcattcgcaacaacatggatgaaccagaggacgttatgctaagtgaaataagctgcaacaacatggatgaaccagaggacgttatgctaagtgaaataagctgggcacagaaagaca---attactgcatgatctcacttatctgtggaatct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178518 287 + 64156825 CTCGTTGTAgaaatcggtgtgtggaggtgacgcctgcactctcagggtgaccgcagagctactcacagctgccaagacctggaagtaacttgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcatttgcaacaacatggatgaacca------------------------------------------------gaggacactgtgttaagtgaaataagccgggcacagaaagacaattattactgcatgatctcacttatctgtggaatct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278513 287 + 59248254 CTCGTTGTAgaaatcggtgtgtggaggtgacgcctgcactcccagggtgaccgcagagctactcacagctgccaagacctggaagtaacttgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcatttgcaacaacatggatgaacca------------------------------------------------gaggacattgtgttaagtgaaataagccgggcacagaaagacaattattactgcatgatctcacttatctgtggaatct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369154 287 + 51301725 CTCATTATGGAAATCGGTGTGTGAAGGTGATGCCTGCACTCCCAGGGTGACCACAGAGCTACTCACAGCTGCCAAGACCTGGAAGTAACTCGAG-----TGTCCATTGCCAAATGAATGGATGAGGAAAATGTGGTGTGtctatgcaatggaatattattcagccctaaaaaaggAAGGACGTTGTAtgatttgcaacaacatggatgaacca------------------------------------------------gaggacattgtgctaagtgaaataagccaggcacagaaagacaattattactgcatgatcttacttatctgtggaatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47074952 287 + 50890351 CTCATTGTGgaaatcggtgtgtggaggtgacgcctgcactcccagggtgaccgcagagctactcacagctgccaagacctggaagtaactcgag-----tgtccactgccaaatgaatggatgaggaaaatgtggtgtgtctatgcaatggaatattattcagccctaaaaaaggaaggacgttgtatcattcgcaacaacatggatgaacca------------------------------------------------gaggacattgtgctaagtgaaataagccaggcacagaaagacagttattactgcatgatctcacttatctgtggaatct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45598493 268 + 49145316 ACCATTGTGgaaatcggagtgtggcagtgacgcctgcactcctgtgatgactgcggcatgacccacagcagccaagacgtggaaataacctgag-----cgtccacccgcaaaggaatggataaggaaaatgtggtgtgcatatgcaatggaatattatacagccc-agaaaaagaaggatgttctgtcattc-caacaacatggatgaactg------------------------------------------------gaggatattaccctaagtgaaataagccgggcacagaaagcca---aacgccgca--------------tgtggaatct i calJac3.chr22 C 0 I 304 e canFam3.chr1 19764256 25 - 122678785 I a score=964963.000000 s hg38.chr19_GL949753v2_alt 345700 367 + 796479 aagaaaagttgatcacccggaagc--agagtagaatggtggttattggaggctgcaggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcgagtagccaggacgagtgaatttttcagatctatggcacagcagaatgacagtagttcataataatttattgtatatttcaaaattgctaaaaggagatttaaaatattctcat-----cacaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaat---tgcaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATAAG s panTro4.chr19 59292711 369 + 63644993 aaaaaaagttgatcacccggaagcagagagtagaatggtggttactggaggctgcgggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcgagtagccaggacgagtgaatttttcagatctatggcacagcagaatgacaatagttcataataatttattgtatatttcgaaattgctaaaaggagatttaaaatattctcat-----cacaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaac---tgcaattatttgtcaattaaaaataaaaTTT-----TTGAAGATAAGAAAAGCAAAATAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175146 371 + 60714840 aaaaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcaggtgc----agggcatgggggagacaccgatcaaatgatacaaagtttcaactagcccggaggagtgactttttcagatctatggtacagcagaatgacagtagttcataataatttattgtatatttcaaaattgctaaaaggagatttaaaatattctcac---aataaaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccgtaatgtgtacatacgtcataatatcacactgtaccccacaaac---tacaattatttgtcaatcaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920214 374 - 106955855 gaaaaaagttgattacagggaagtagggagtagaatggtggttactggaggctgcaggtgc----ggggcatgggagagacactgatcaaatgatacaaagtttcaactagccaggaggagtgaatttttcagatctgtggcacagcagaatgacaatagttcataataatttattgtgtatttcaaaattgctaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatggggctgatatgttaatcagctttatttaatctttccacaatgtgtacatacgtcataatatcacactgtaccccgcaaac---tacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAAGCAAAATATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60178805 378 + 64156825 aagaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacagagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcagatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55278800 378 + 59248254 aagaaaagttgatcacacggaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacagagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcagatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47369441 377 + 51301725 aagaaaagTTGATCGCacggaagtagagagtagaatggtggttactggAGGCTGCAGGGCCTCCAGTAATATGGGAGAGACACTGATCAAATGATACAAAGTTTCAACTAGCCAGGAGGAGTGAGTTTTTCAGATCTGTTGCACAGCAGA---ACAATAGTTCATAATAATtgattgtatatttcaaaagtactaaaaggagattttaaatatgctcatcacaataaaataagtaTGTGATGGGACTGATATGTTAATCAGCTTTATTTAATCTTTCCACCATGTGTACACACGTCATCATACCACAATGTACCCTTcaaacatatacaattatttgtcaattaaaaattaaattt-----ttgaaaataagaaaggcAAAATAA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47075239 378 + 50890351 aagaaaagctgatcacacagaagtagagagtagaatggtggttactggaggctgcagggcctccagtaatatgggagagacactgatcaaatgatacaaagtttcaactagccaggaggagtgagtttttcagatctgttgcacagcaga---acaatagttcataataatttattgtatatttcaaaagtactaaaaggagatttaaaatattctcatcacaataaaataagtatgtgatgggactgatatgttaatcagctttatttaatctttccaccatgtgtacacacgtcatcatatcacaatgtacccttcaaacatatacaattatttgtcaattaaaaataaaaTTT-----TTGAAAATAAGAAAGGCAAAATAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599065 365 + 49145316 aaaaaaagtc-atctcacagaggtagagagtagagtaatgg-tattagaggctggaggtgg----aggccttgggagagacgctg-----atgaggaggagtttcgatgagacaggaggaggaagttttgc-ggtctattgcacagcaggctgacgagagttaagaatcacttattatatacttcaaaattgctaaaagtaggttttgaatgttctcat-----cacaataagtatgtgatgtgattggtatgttagctatccttatttaatctgtccacaatgtttacatccgctgtaacatcacattgtaccccacaaacatacataa----ttgtcaattaaaaataagaTTTGTCAGTTAAAAATAAGAAAAGCAAAATATG i calJac3.chr22 I 304 C 0 e canFam3.chr1 19764256 25 - 122678785 I a score=178735.000000 s hg38.chr19_GL949753v2_alt 346067 67 + 796479 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGGGTTGGTTATGCATTTTACATTTGGAAGAGTTTG s panTro4.chr19 59293080 67 + 63644993 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGGGTTGGTTATGCATTTTACATTTGGAAGAGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175517 67 + 60714840 ACAGGTGGAAGATGCGAGAGAGAACTGGGTGAGGGTTAGTTATGCATTTTACATTTGGAAGAGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920588 63 - 106955855 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATTTGGAAGAGTTTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179183 63 + 64156825 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATCTGGAATAGTTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279178 63 + 59248254 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATCTGGAATAGTTTG i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47369818 56 + 51301725 -------GAGGATGCGAGAGAGAACTGGGTGAGG----GTTATGCATTTTACATTTGGAATAGTTTG i papAnu2.chr19 C 0 I 349 s chlSab2.chr6 47075617 63 + 50890351 ACAGGTGGAGGATGCGAGAGAGAACTGGGTGAGG----GGTATGCATGTTACATTTGGAATAGTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599430 63 + 49145316 ACAGGCGGAGAATAAAGGAGAGAAAGGGGTGAGG----GCAGCGCATTTCCCATGTGGAATCGTTTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19764281 54 - 122678785 ACAGGTGGGGAATA-GGGAGAGAGTT-TGCAAGG----GTCA-------TACATTGGCGATTGTTTG i canFam3.chr1 I 25 C 0 a score=1189831.000000 s hg38.chr19_GL949753v2_alt 346134 382 + 796479 CAATCTAGGGTATATTTAAAGGGATCTCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGCACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGATGGGACGAAGGCATGACTTACCCTCCTGCGTGTGGATGGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCCCCAGTGAGAAAAATGCCCAGTGCCCAGTCTCCTTACGGGGCTGCTGTCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACATCACTGTCTCCATGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCCTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT s panTro4.chr19 59293147 382 + 63644993 CAATCTAGGGTATATTTAAAGGGATCTCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGCACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGACGGGACGAAGGCATGACTTACCCTCCTGCGTGTGGATGGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCTCCAGTGAGAAAAATGCCCGCCGCCCAGTCTCCTTACGGGGCTGCTGTCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACATCACTGTCTCCATGTAATCCTTCTTGCTGCAAAAGGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175584 382 + 60714840 CAATCTAGGGTATATTTAAAGGGATCCCTCCAGGCCCTCTAAGAATCAACATCACTCCCACCCAGAACTGCCCTTGGGGTGACAGAAGGGACTGGGAAGACGGGACAAAGGCATGACTTACCCTCCTGCGTGTGGATTGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGCTCCAGTGAGAAAAATGCCCACCACCCAGTCTCCTTATGGGGCTGCTATCAAAAGGGGGCTCGATGGAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACGCTACTCGACATCACTATCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102920651 381 - 106955855 CAATCTAGGGTATATTTAAAGGGATCCCTCCGGGCCCTCTAAGAATCGACATCACTCCCACCCAGAACTGCCCTTGGGGTGACAGAGGGGACTGGGAAGACGGGACGAAGATGTGACTCACCCTCCCGCGTGTTGATCGTCTGGGCCAGGCAGAGCACTGGAAGAGAAGGTCCAGTGAGAAAAATGCCCACCACCCAGTCCCCTTACAGGGCTGCTAACAAAAGGGGGCTCGATGCAGCTGGGGGGCATTCAGCATTTCATAACGACCAAGCCAACCCTCCTCGACAGCACTAGCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GC-CCCCCAGTCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179246 380 + 64156825 CAATCTAGGGTATACTTAAAGGGGTCCCTCC-GGCCCTCTAAGCATCAACATCGCTCCCACCCAGGACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACGAAGGTGTGACTCACCCTCCTGCGCGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCGAAAGGGGGCTGGATGGAGCTGGGGGGCATTCAGCATTTCATCAGGACCAAACCAACCCTCCTCGACATCGCTATCTCGGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279568 381 + 59248254 cAATCTAGGGTATACTTAAAGGGGTCCCTCCAGGCCCTCTAAGCATCAACATGACTCCCACCCAGGACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACAAAGGTGTGACTCACCCTCCTGCGCGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTTTCAAAACGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCAGGACCAAACCAACCCTCCTCGACATCGCTATCTCGGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47370223 381 + 51301725 caatctagGGTATACTTAAAGGGATCCCTCCAGGCCCTCTAAGTATCAACATGACTCCCACCCAGAACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACGAAGGTGTGACTCACCCTCCTGCGTGTGGATCGTCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCGAAAGGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCATGACCAAACCAACCCTCCTCGACATCGCTATCTCAGTGCAATCCTTCTTGCTGCAAAATGGTTTCAAGATCAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i papAnu2.chr19 I 349 C 0 s chlSab2.chr6 47075680 381 + 50890351 CAGTCTAGGGTATATTTAAAGGGATCCCTCCAGGCCCTCTAAGCATCAACATCGCTCCCACCCAGAACTGCCCTTGGGGTGCCAGAGGGGACGGGGAAGACGGGACAAAGGTGTGACTCACCCTCCTGCGTGTGGATCATCTGGGCCAGGCAGAGCACTGCAAGAGAAGCCCCAGTGAGAAAAATG-CCACCACCCAGTCTCCTTACGGGGCTGCTATCAAAAGGGGGCTGGATGGAGCTGGGGGGCGTTCAGCATTTCATCATGACCAAACCAACCCTCCTCGACATCACTAGCTCAGTGTAATCCTTCTTGCTGCAAAATGGTTTCAAGATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCCAGCCCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45599493 379 + 49145316 CAATCTAGGGCACATTT-CAGGGATCCCTCCGGGCCCTCTGAGAATCAACTTCACTCCCACCCAGAACTGCCCTTGGGGT-ACAGAGGGGACTGGGGAGACGGGATGAAGACGGGACTCACCCTCCTGTGTGCGGATCATCTGGGCCAGGCAGAGCACTGGAAGAGAAGCCGCAGTGAGAGAAATGCCCACCGCCCAGTCCTCACACGGGGCTGCTATCAAAAGGAGGCTCCATGCAGCT-GGGCACATTCAGCATTTCATAATGACCAAACCGCCCCTCCTCCACATCACTGTCTGAGTATAATCCTTCTTGCTGCAAACTGGTTTCAAAATAAATCCCAAAGTCTCCTCTTCCAAAAAGGCTCCT-GCTCCCCAAGCCCtt i calJac3.chr22 C 0 I 287 s canFam3.chr1 19764335 282 - 122678785 CAATTTGGGGCAAATTTCAGGGCCTCCTCCCAGGCCCTCCCAGGGTCAGCACCA-TCCTGTCCAGAGCTGCCTTTGGGATG-CAAAGAGGATGAGGAGGA--------------GACTCACCCTGCTGTGCGTGGAGCCCTCCACCCAGGCAGAGCGCTGAAAGAGAGGATCTGGTGAGAGAGAGA-CCACT-CCCAGTTCCATCA-----------------------------------GGGGCCACCC--CAGTCCAT---------------------------------------------CTTCTTGCTCTGAAATAGTCTCAAGACAAGCCCC-CGGCCCCCTCTTCCAAATAGGTGCTTCTCTCCCCCAGCCCCT i canFam3.chr1 C 0 C 0 a score=802867.000000 s hg38.chr19_GL949753v2_alt 346516 259 + 796479 CTTAAAGCTGACCTCATCCCCACACCCGGGCCCCTGTTTTTAGGACAAGATCTTCTCTGATCAGACTTAGGC--CCCAGGGAGAGCAGCAGGGCAGTCTTGGGAGGAGGAGGACACTTTCCT----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------TTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCGGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCAGGTC s panTro4.chr19 59293529 259 + 63644993 CTTAAAGCTGACCTCATCCCCACATCCAGGACCCTGTTTTTAGGACAAGATCTTCTCTGATCAGACTTAGGC--CCCAGGGAGAGCAGCAGGGCAGTCTTAGGAGGAGGAGGACACTTTCCT----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------TTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCGGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56175966 236 + 60714840 CTTAAAGCTGACCTCATCCCCACACCCAGGACCCTGTTTTTAGGACAAGGTCTTCTCTGATCAGACTTAGGC--CCCGGGGAGAGCAGCAGGG----------------------CTTTCCT----CCCCAGAATCTTCTGGACTAGACTCAGGCTTGAGCAGGGAA---------CTTTCCAGACCTCCCAACCCCCTTTCCAG-CCTCCCTGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGT-GGGAGACATGGCCCCGGTC i ponAbe2.chr19 C 0 M 316 s nomLeu3.chr10 102921032 258 - 106955855 CTTGAGGCTGACCTCATCCCCACACTCAGGACCCTGTTTTTAGGACAAGGTCGTCTCTGATCAGACTTAGG---CCCGGGGAGAGCAGCAGGGCAGTCTTGGGAGGAGGAGGACACTTTCCC----CCCCAGAATCTTCTGGACTAGAGTCAGGCTTGAGCAGGGAA---------CTTTCCAGACCCCCTGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179626 258 + 64156825 CTGAAAGCTGACCTCATCCCCATACCCGGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGGCTTGAGCAGGGAA---------CTCTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55279949 258 + 59248254 CTTAAAGCTGACCTCATCCCCATACCCGGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCTGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGGCTTGAGCAGGGAA---------CTTTCTAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47370604 258 + 51301725 CTTAAAGCTGACCTCATCCCCACACCCAGGCCCCTGTTTTTAGGACAAGGTCTTCTCTGATCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCT----TCCCAGAATCTTCTGCACTGGAGTCAGACTTGAGCAGGGAA---------CTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076061 258 + 50890351 CTTAAAGCTGACCTCATCCCCACACCCAGGCCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCAGACTTAGGC--CCCGGGGAGAGCAGCAGGGCAGTCTTGGG-GGAGGAGGACACTTTCCA----TCGCAGAATCTTCTGCACTGGAGTCAGGCTGGAGCAGGGAA---------CTTTCCAGACCTCCCGACCCCCTTTCCAG-CCTCCCCGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGGCCCCGGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600159 255 + 49145316 CTTAAAGCTGACCTTATCCCCACACCCAGGTCCCTGTTTTTAGGACAAGGTCTTCTCTGGTCCGACTTAGGC--CCCAGGGAG---AGCAGGGCAGTCTTGGG-GGAGGAGGACAC-TTCCC----CCCTAGAATCCTCAGGACTGGAGTCAGGCTTGAGCAGGGAA---------CTTTTCAGACCTCCCAACCCCCTTTCCAGTCCTCCCTGCTGC----------CTCCAGGACTCACCTAGGCCCAGGAGGGCGGTGGGGTGGGGAGACATGACCCCAGTC i calJac3.chr22 I 287 C 0 s canFam3.chr1 19764617 260 - 122678785 CTGGAGTCTGAATTAATCTCTG---------------TTCTAGAACTGAACCCAC-ATGGTCTGACCTAGGTTGTCTGGGGCAGGAGGTAGGGTGTT-------GACCTACTTCACTCCCCCAGGATCCTGGAGTCTTCTGGACTGGGGGCAGGACTGGGAAGGGAAGCAGGCCCCCTCCCCAAATCTTCTGCCCACTCACGCTG-TCCCCCTAACCCTTTATTTCCATTTCAGGACTCACTGAGGGCCAGGAAGGTGGTCACATGGGGAAACATG-CCGAGATC i canFam3.chr1 C 0 C 0 a score=618629.000000 s hg38.chr19_GL949753v2_alt 346775 217 + 796479 CCAGCAGTGCAGCCTGGCCTGAGGCGCACCAATGCA-AGGACAGAACTCTGCAGCAGACACAAGCAGACAGGATGTGCTGCCCGGGGGCCTCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTTGGTTTCTGAAAAATGTCGCTTACCC s panTro4.chr19 59293788 217 + 63644993 CCAGCAGTGCAGCCTGGCCTGAGGCGCACCAATGCA-AGGACAGAACTCTGCAGCAGACACAAGCAGACAGGATGTGCTGCCCGGGGGCCTCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTCGGTTTCTGAAAAATGTCGCTTACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4398759 177 - 60714840 ----------------------------------------TCAGAACTCTGCAGCAGACACAAGCGGACAGGATGTGCTGGCCAGAGGCCTCCTGCCTATGGGGTTTCCACAGCAACTGCCTCACAC-AAGAGGGAGAGCTTTCTGTTCTGTTCTTTCCACCCTTCCCACTAGTGAGATGAGAGGGAGGGCCTTGGTTTCTGAAAAACGTCGCTTACC- i ponAbe2.chr19 n 0 C 0 s nomLeu3.chr10 102921290 217 - 106955855 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGCAGAGAACTCTGCAGCAGACACAAGCGGACAGGATGTGCTGGCGAGGGGCCCCCTGCCTATGGGGCTTCCACAGCAACTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCTACCCTTCCCACTAGTGAGACGAGAGGGAGGGCCTTGGTTTCTGAAAAATGTCGCTTACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60179884 217 + 64156825 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGTGCTGGTTTCTGAAAAATGTCACTTACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280207 217 + 59248254 CCAGCAGTCCGGCCTGGCCTGGGGTGCACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGTGCTGGTTTCTGAAAAATGTCACTTACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47370862 217 + 51301725 CCAGCAGTCCGGCCTGGCCTGGGGCACACCAGTGCA-AGGACAGAACTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGtttccacagcagctgcctcACAC-AAGAGGAAGAGCTCTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGACAAGAGGGAGGGCGCTGGTTTCTGAAAAATGTCACTTACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076319 217 + 50890351 CCAGCAGTCCGGCCTGGCCTGGGGCACACCAGTGCA-AGGACAGAAGTCTGCAGCAGACACAAGCTGACAGGATGTGCTGGCCAGGGGCCTCCTGCCTGTGGGGTTTCCACAGCAGCTGCCTCACAC-AAGAGGAAGAGCTTTCTGTCCTGTTCTTTCCCCCCTTCCCACTAGTGAGATAAGAGGGAGGGCGCTGGTTTCTGAAAAATGTCACTTACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600414 171 + 49145316 ----------------------------------------CCAGAACTCTGCAGCACATGCAAGCGGGCAGGTTGTGCCAGCCA----CCTCCTGCCTATGGGGTTCCCACAGCAACTGCCTCACGC-AAGAGGAAGAGCTTTCTGCCCTGCTCTTTTCACACTTCTCAC---TGAGACCAGAGGGAGGGCCTTGGTTTCTGAAAAACGTCGCTTACCC i calJac3.chr22 C 0 I 7 s canFam3.chr1 19764877 203 - 122678785 CCTGCAGCCTGCACCGTCCTGGAG----CCACTGGGTAGGATAGAGC-CTGCAGCCGACACGGG--GACAGGATGTGTCAGCTGAGG----CATG-TTATGGAGTTTCTACATCAGCAGTCCCCCACAAAGAGGAAGCATGTTC--CCCTGTCCTTCCCACTTGTCCCACTA-TGAGAC-AGAGCGAGGGTTTTGGCCTCCAAAAGATGCCTCTTCCTT i canFam3.chr1 C 0 C 0 a score=19470.000000 s hg38.chr19_GL949753v2_alt 346992 17 + 796479 TAAATGTCGCTTAGAGG s panTro4.chr19 59294005 17 + 63644993 TAAATGTCGCTTAGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4398936 8 - 60714840 -------CGCGTGAT-- i ponAbe2.chr19 C 0 I 3323 s nomLeu3.chr10 102921507 17 - 106955855 TAAATGTCGCTTAGAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180101 17 + 64156825 TAAATGTGGCTTAGGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280424 17 + 59248254 TAAATGTGGCTTAGGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371079 17 + 51301725 TAAATGTGGCTTAGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076536 17 + 50890351 TAAATGTGGCTTAGGAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19765080 12 - 122678785 -----CATGCTTGGATG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45600585 7 + 49145316 I a score=788838.000000 s hg38.chr19_GL949753v2_alt 347009 273 + 796479 -----CAGATGACCGTAAACTAGTTACCAGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAATTGACTTGGACG-CCGTCCCAACTCCACAAGTTAACGGTCGCAGCTCTTGGGCAAGACGTTACAAAACTAGAAGCTGACATTTCCTTGTATTACAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTAATATTGTGATCTATGCTAAAAT--CCCGACAAGGTATTTA--ACACGTT-AAAAATATCCTACAAA s panTro4.chr19 59294022 273 + 63644993 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACACGTTAACGGTCGCAGCTCTTGGGCAAGACGTTACAAAACTAGAAGCTGACATTTCCTTGTATTACAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTAATATTGTGATCTATGCTAAAAT--CCCAACAAGGTATTTA--ACACGTT-AAAAATATCCTACAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56176519 273 + 60714840 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACAAACTGACCTGGACG-CTATCCCAACTCCACAAGTTAACGGTTGCAGCTCTTGGGCAAGACATTACAAAACTAGAAGCTGATATTTCCTCGTATTACAAATGGGAGCCATAGAAATCCTTCCCCCAGTTTTTAATATTATGATCTCTGCTGAAAT--CCCAACAAGATATTTA--ACACGTT-AAAAATATCCTACAAC i ponAbe2.chr19 M 316 C 0 s nomLeu3.chr10 102921524 272 - 106955855 -----CAGATGACCCTAAACTAGTTACCCGATGTGTCAGCCTCTTTCTAAATCTATGAG----------------------------------------------------------------------------------------------ACAAGGGAGAATAAAGGC-C----------------GGGCAACCAACTGACTTGGACG-CCAGCCCAACTCCACACGTTAATGACCACTGCTCTTGGGCAAGATGTTACAAAACTAGAAGCTGACATTTCCTT-TATCACAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTAATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACACATT-AAAAATATCCTATAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180118 274 + 64156825 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGCAGCTCTTGGGCAAGACGTGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTCATACTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--GCATGTTAAAAAATATTCTACGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280441 274 + 59248254 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGCAGCTCTTGGGCAAGACGTGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAATTTTTCATACTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACATGTTAAAAAATATCCTACGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371096 273 + 51301725 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTATGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GAGCAACCAACTGACTTGGACG-CCATCCCAACTCCACAAGTCAACGGTCGAAGCTCTTGGGCAAGACATGACACAACTAGAAGCTGACATTTCCTCGTATTAGAAATGGGAGCCATAGAAATCCTTCCCCAAGTTTTTCATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTA--ACATGCT-AAAAATATCCTACAAc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076553 276 + 50890351 -----CAGATGACCCTAAACTAGGTACCCGATGTGTCAGCCTCTTTCTAAATCTACGGG----------------------------------------------------------------------------------------------ACAAGGCAGAATAAAGGT-C----------------GGGCAACCAACTAACTTGGACG-CCATCCCAACTCCACAAGCCTACGGTCGCAGCTCTTGGGCAAGACGTGACAAAATTAGAAGCTGACGTTTCCTCGTATTAGAAATGGGAGCCGTAGAAATCCTTCCCCAAGTTTTTCATATTGTGATCTTTGCTAAAAT--CCCAACAAGGTATTTAACACACGTTAAAAAATATCCTACAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600592 381 + 49145316 -----CAGATGACGCTAAACTAGTTACTCCATGTGTCA-CCTCTTTGTGAATCTATGGGAGCAGAGAACTTTCCAGACCTCCCGACCCCCTTTCCAGTCCTCCCCACTCCCTCCAGGACTCACCTAGGCCCAGGAGGGCAGTGGGGCGGGGGTACATGGCAGAATAAAGGT-CCTTGTCCTATGGGGTGGTGCAACA---TGCCTTGGACA-CCTTCCCAGCTCCACAGGTCAACAGCCGCAGCTCTTGGGCAAGACGTTACAAACTCAGAAGCTGACATTTCCTCGTATTTGAAATGGGAGCCACAGGAACCCTTCTCCAAGTTTTTAATATTGTGATCTTTGCTAAAATCGCGCAACAAGGTATTTA--ACATGTT-GAAAACACCCTGCAAT i calJac3.chr22 I 7 C 0 s canFam3.chr1 19765092 277 - 122678785 AGGCTGAACTCACCCCCAGATGAACCCCTGAGGGGAAAACCTAATTTTCAACCTCAGGg----------------------------------------------------------------------------------------------accaggcaggacatggctgt----------------gtacaagaaagtgacttgaatatctgtcccagctccaaaaaaagaccatc--tgttcttgggcaagacattatgccactttacaccaacatttcctcatatttgaaatgggaagcctag-aatcttcctcccagcattgacTATCATAATATTCGTTAAATT--CTCAGTCACATGTTGA--GAACTTT-AAAAATGTTATGCTAA i canFam3.chr1 C 0 I 1267 a score=551870.000000 s hg38.chr19_GL949753v2_alt 347282 209 + 796479 GCATATTA-TTTTTTTAAGGAGAC--tattggtgaggatgtggagaaactggatccctcgcataccacagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcaatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaacaggccaggcgcagtggctcacag s panTro4.chr19 59294295 212 + 63644993 GCATATTATTTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcaatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaagaggccaggcgcggtggctcacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56176792 211 + 60714840 GCATATCA-TTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtaggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcgatcccacttctgggtctgtatt--------------------------------------------------------taaaagaaacaggccaggcgcagtggctcacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102921796 211 - 106955855 GCATATTA-TTTTTTTAAGGAGACagtattggtgaggatgtggagaaattggatcccttgcatacttcagtgggaattaagaattgggcaatcactgtagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggtccagcgatcccacttctggggctgtatt--------------------------------------------------------taaaagaaACAggccaggcacggtggctcacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60180392 267 + 64156825 GCATACTA-TTTTTTTCAGGAGACagtgttggtgaggatgtggagaaactggatcccttgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggaatcccacttctgggtctatatttaaaataaacaaaacaaaacaaaaaaaataaataaaaattaaaaaataaaataaaataaaataaacaggccaggcatgatggctcacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280715 267 + 59248254 GCATACTA-TTTTTTTCAGGAGACagtgttggtgaggatgtggagaaactggatccctcgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggaatcccacttctgggtctatatttaaaataaacaaaacaaaacaaaaaaaataaataaaaattaaaaaataaaataaaataaaataaaCAggccaggcatgatggctcacgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371369 211 + 51301725 gcatttta-tgtttttaaggagacagtgttggtgagaatgtggagaaactggatccCTTGCGTACTTCAGTGGGAATTAAAAATTGGGCAATCACTATAGAGAACAGTggggaggttcctcaaaaaattaaaaatagagctaccatatggcCCAGGAGTCCCACTTCTGGGtctatgtt--------------------------------------------------------taaaataaacaggccaggcatgatggctcacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47076829 211 + 50890351 GCATGCTA-TTTTTTTCAGGAGACagtgttggtgtggatgtggagaaactggatcccttgcgtacttcagtgggaattaaaaattgggcaatcactatagagaacagtggggaggttcctcaaaaaattaaaaatagagctaccatatggcccaggagtcccacttctgggtctatgtt--------------------------------------------------------taaaataaacaggccaggcatgatggctcacgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45600973 165 + 49145316 GGATGGTA-TTTGTTTAAGGAGACGGCAttggtgaggatgtggagaaactggctcccttgcatacttcggtgggaatgaaaagctgtgcaatcactgtagagaacagtgtggaggttccttaaaaagttagaaatagaactacca------------------------------------------------------------------------------------------------------gctgggcgcggtggctcacaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I a score=363079.000000 s hg38.chr19_GL949753v2_alt 347491 168 + 796479 ctgtaatcccagcacttcgggaggccggggtgggtggatcacctgaggccataaattcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttggaaggttgaggcag---gagaatcgc s panTro4.chr19 59294507 168 + 63644993 ctgtaatcccagcacttcgggaggccgaggtgggtggatcacctgaggccataaattcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttgggaggctgaggcag---gagaatcgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177003 168 + 60714840 ctgtaatcccagcacttcgggaggccgaggcgggtggatcacctgaggccacaaactcgaaaccagcctggccaacatagtgaaaccctgtctctactaaaaatac-aaaaaattagctgggtgtggtggtg---gg----------cacagctacttgggaggctgaggcag---gagaattgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60180659 182 + 64156825 ctgtcatcccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagactagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55280982 182 + 59248254 ctgtcatcccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371580 179 + 51301725 ctgccatcccaacactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccgacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtg---ggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47077040 179 + 50890351 ctgccatctcaacactttgggaggccgaggcaggtggatcacctgaggccaggagttcgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaaattagctgggtgtggtggtg---ggtgcctgtaatcccagctacttgggaggctgaggcag---gagaatcgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45601138 176 + 49145316 ttgtaatcccagaactttaggaggccgaggcgggtggacca--tgaggtcaagagattcagatcatcctggccaaggcggtgaaacc--gtctctactaaaaatac--aaaaatcagctgggcatggtagca---tgcacctgtagtcctagctgctgaggaggctggggcaggCAgagaaccgc i calJac3.chr22 C 0 I 694 e canFam3.chr1 19765369 1267 - 122678785 I e nomLeu3.chr10 102922007 0 - 106955855 C a score=770417.000000 s hg38.chr19_GL949753v2_alt 347659 452 + 796479 ttgaacccagaaggcaggggttgcagtgagctgagattgcaccattgccctccagcctgggcaacaacagcaagactctgtcta----aaaaaaaaaaaaaaatcagtatgtcaaagagccgtctgaactcccctgatcactgcagcactattcgcaatagctaagacgtgaaaaccatctaaatgtccattgatagaataattgatatagaaaatgtggtgcacacacaggggaatactattcagccttaaacaaggaagaaaattctgccatgggcgacaacacggacgaaacctgaggacatcacgccaagcgacgcagaggcagagaccaagtactgcatgatgtcacttacaggagatctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttacgggggctgggaggagggggaaatggggagttattAACAAACAGG-C s panTro4.chr19 59294675 447 + 63644993 ttgaacccagaaggcaggggttgcagtgagctgagattgcaccactgccctccagcctgggcaacaacagcaaga--ctgtcta----aaaaaaaaaaaag---cagtatgtcaaagagttgtctgaactcccctgatcactgcagcactattcacaatagctaagacgtgaaaatcatctaaatgtccattgatagaagaatggatgtagaaaatgtggtgcacacacaggggaatactattcagccttaaacaaggaagaaaattctgccatgggcgacaacacggacgaaacccgaggacatcacgccaagcgacgcagacgcagagaccaagtgctgcatgatgtcacttacaggagatctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttccgggggctgggaggagggggaaatggggagttattAACAAACAGG-C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177171 443 + 60714840 ttgaacccggaaggcgggggttgcagtgagctgagattgcaccattgccctccagcctgggcaacaagagcaagactctgtcta----aaaaaaaaaat-----cagtatgtcaaagagttgtctgaactcccctgatcactgcagcactattcacaatagctaagacgtgaaaatcatctaaatgtccattgatagaagaatggatatagaaaatgtggtacacacacaggggaatactattcagccttaaacaaggaagaaaattcttccatgggcgacaacacggacgaaccctgaggacatcacgccaagcgat------gcagagaccaagtactgcatgatgtcacttacaggagatctgcaaagtcaccagagtcaacaacatcacagcagggaatggtggttacaggggctgggaggagggggaaatggggcgttattAACAAACAGGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60180841 450 + 64156825 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactccagcctgggcaagaagagcaagactctgtctccaaaaaaaaaaaaaaaaaatcagtatgt-aaagagccatctgaactcccctgatcacggcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatgggcgacaacacagacaaaccctgaggacatcacgccaagcgatgcagatgcggagaccaagtactgcatgatgtc----acaggaggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaagggaaaatggggagttattagcaaacagg-c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55281164 445 + 59248254 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactccagcctgggcaagaagagcaagactctgtctcc-----aaaaaaaaaaaaatcagtatgt-aaagagccatctgaactcccctgatcactgcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatgggcgacaacacaggcaaaccctgaggacatcacgccaagcgatgcagatgcggagaccaagtactgcatgatgtc----acagggggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaagggaaaatggggagttattAGCAAACAGG-C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47371759 447 + 51301725 ttgaacccagaaggcgggggttgcagtgagctgagattgcaccattgcactctagcctgggcaagaagagcaagactctgtctcc---aaaaaaaaaaaaaaatcagtatgt-aAAGAGCCATCTGAACTCCCCTGATCACTGCAGCACTATGCACTATAGCTAAGACGTGAAAATCATCTAAATGTCca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagccttaaacaaggaagaaaattctgccatGGGCGACAACACAGACAAACCCTGAGGACATCACGCCAAGTGATGCAGATGCAGAGACCAAGTACTGCATGACGTC----ACAGGAGGTCTGCAAAGTCACCAGAGTC-ACAACATCACAGCAGGGAATGGTGGTTATGGGGGCTaggaggaagggaaaatggggagttattaGCAAACAGG-C i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47077219 446 + 50890351 ttgaacccagaaggcgggggttgcagtgagctgagactgcaccattgcactccagcctgggcaagaagagcaagactctgtctc----aaaaaaaaaaaaaaatcagtatgt-aaagagcaatctgaactcccctgatcactgcagcactatgcactatagctaagacgtgaaaatcatctaaatgtcca-tgacagatgaatggatatggaaaatgtggtacacacacaggggaatactatgcagtcttaaacaaggaagaaaattctgccatgggcgacaacacagacaaaccctgaggacatcatgccaagcaatgcagatgcagagaccaagcactgcatgatgtc----acaggaggtctgcaaagtcaccagagtc-acaacatcacagcagggaatggtggttatgggggctgggaggaggggaaaatggggagttattAGCAAACAGG-C i chlSab2.chr6 C 0 I 179 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C a score=595217.000000 s hg38.chr19_GL949753v2_alt 348111 509 + 796479 -ctagagatctgctgcaccacatacgaccc----atcgtcagcaataacgtcttgttcacttgaaatttgttaacggaatagacctcatgttatttggagggcccggaggaagacaggaagagaagggaatgtttgaaacttcttagagatggattaaatggttgtgaccaaaatgctgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagctggaaataaggatcttacttggaactagagcgaaagccacctttgttacgccttagcaaacaacgtggctgcattctgtccatgccctagagataccacgccagggtgtctggcggaagaaatttc-------ttttctttttttttaaacggagtctcgctctgttgcccaggctggagtgaagcagtgcgatctcggctccctgcaacctctgcctcccagattcaagccattctcctgcctcagcctcccgattagctgggactacaggcacccaccaccacgcccggctaatttt s panTro4.chr19 59295122 509 + 63644993 -ctagagacctgctgcaccacatacgaccc----atcgtcagcaataacgtcttgttcacttgaaattcgttaacggaatagacctcatgttatttggagggcccggaggaagacaggaagagaagggaatgtttgaaacttcttagaggcggattaaatggttgtgaccaaaatgctgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagttggaaatgaggatcttactgggaactagagcgaaagccacctttgttacgccttagcaaacaacgtggctgtattgtgtccatgtcctagagatACCACGCCAGGGTGTCTGGCGGAAGAAAtttc-------ttttctttttttttaaacggagtctcgctctgtcgcccaggctggagtgcagtggctcagtctcggctcactgcaacctccatctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56177614 510 + 60714840 -ctagagatctgctgcaccacatacgaccc----atcgtcaccaataacgtcttgttcacttgaaatgtgttaacggaatagacctcgtgttatttggagggcccggaggaagaccggaagagaagagaatgtttgaaacttcttagagacggattaaatggttgtgaccaaaacgccgatagtgatgtgaacagcgaagtccaggctgacaaggtctcagttggaaatgaggatcttactgggaactagagtgagggccacctttgttacgccttagcaaacaacgtggctgcattgtgtccatgccctagagataccacgccagggtatctggcagaagaaatttct------ttttttttttttttaaacggagtctcgctctgtcgcccaggctggagtgcagtggtgggatctcggctcactgcaagctccgcctcctgggttcacgctattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccacgcccggctaatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181291 505 + 64156825 cct----atctgctgtccaacatacgacctataaatcatcaataataatgtcttgttcacttgaaatttgttaa----------ctcatgttatttggagggcccagaggaagacaggaagagaagggaatgtttgaaacttcttggagactgattacatggttgtgaccaagatgctgatagtgatgtgagcagcgaagtccagactgacaaggtctcagctggaaatgaggatcttactgggaactagagcaatggccgcccttgttacgccttagcaaacaacactgctgcatagcgtccatgccctcgagatACCACGCCAGGGTATCTGG-GGAAGAAAtttcttttttcttttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctcactgaaacctccgcctcccaggttgacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccacctcgcccggctaatttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55281609 505 + 59248254 CCT----atctgctgtccaacctacaacctataaatcatcaataataatgtcttgttcacttgaaatttgttaa----------CTCATGTTAtttggagggcccagaggaagacaggaagagaagggaatgtttgaaacttcttggagactgattacatggttgtgaccaagatgctgatagtgatgtgagcagcgaagtccagactgacaaggtctcagctggaaatgaggatcttactgggaactagagcaatggccgcccttgttacgccttagcaaacaacactgctgcattgcgtccatgccctcgagatACCACGCCAGGGTATCTGG-GGAAGAAAtttcttttttcttttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctcactgcaacctccgcctcccaggttgacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccacctcgcccggctaatttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47372206 505 + 51301725 CCT----ATCTGCTGTCCAACATACGACCTATAAATCATCAATAATAATGTCTTGTTCACTTGAAATTTGTTAA----------CTCATGTTATTTGGAGGGcccagaggaagacaggaagagaagGGAATGTTTGAAACTTCTTGGAGACTGATTACATGGTTGTGACCAagatgctgatagtgatgtgagCAGCGAAGTCCAGACTGACAAGGTCTCAGCTGGAAATGAGGATCTTACTGGGAACTAGAGCAATAGCCACCCTTGTTACGCCTTAGCAAACAACATGGCTGCATTGCGTCCATGCCCTCGAGATACCACGCCAGGGTATCTgg-ggaagaaatttcttttttc-tttttcttttttttaacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcgtggctgactgcaacctccgcctcccaggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgacaccacgccaggctaatttt i papAnu2.chr19 C 0 I 8656 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I a score=52482.000000 s hg38.chr19_GL949753v2_alt 348620 65 + 796479 ttgtatttttagcagagtcggggtttcaccgtgttagccaggatggtctcgatctcctgacctcg s panTro4.chr19 59295631 65 + 63644993 ttgtatttttagtagagacagggtttcactgtgttagccaggatggtctcgatctcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178124 65 + 60714840 ttgtatttttagtagagacagggtttcactgtgttagccaagatggtctcaatctcctgacctca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181796 65 + 64156825 ttgtatttttagtagagacaggatttcattgtgttggccaggatggtcttgatctcttgtcctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282114 65 + 59248254 ttgtatttttagtagagacaggatttcattgtgttggccaggatggtcttgatctcttgtcctcg i macFas5.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I a score=30568.000000 s hg38.chr19_GL949753v2_alt 348685 59 + 796479 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgaaccaccaagcct s ponAbe2.chr19 56178189 59 + 60714840 ttatccgcccgcctcggcctctcaaagtgctgggattacaggtgtgaaccaccaagccc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181861 59 + 64156825 tgatccacccgcctcggcctctcaaagtgctgggattacaggcgtgagccaccacgcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282179 59 + 59248254 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcct i macFas5.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I e panTro4.chr19 59295696 0 + 63644993 C a score=28819.000000 s hg38.chr19_GL949753v2_alt 348744 337 + 796479 ggccaagtcagaagaaatttctaagcaacaaagtgttcaagtggcatggcttcttgtaccaacctaggctcagatgtgggagcaaagaaattacctaaaggtagagtttatatttaaaagagaagcaaagtgtaaaagttcgaaaaatttgcggactagccacatggtagaaaagaaaagtccgttttcaggggaggaattcaagtaggctgctgggcaacgacttgctggagaaatttgcataactaagagggagtcacgtgctgtaccaaaacatctcatctaccccataaatatatacacctactatgtatacacaaaaattaaaaATTTAAAA s ponAbe2.chr19 56178248 336 + 60714840 ggccaaggcagaagaaatttctaagcaacaaagtgttcaagtggcatgggttcttgtaccaacctaggctcagacgtgagagcaaagaaattacctaaaggtagagtttatatttaaaagagaagcaaagtgtaaaagttcgaaaaatttgcagactacccacatggtagaaaagaaaaatccattttcgggggaggaattcaggtagtctgctgggcaatgacttgccggagaaatttgcataactaagagggagtc-catgctgtatcaaaacatctcatctaccccataaatatatacacctactatgtatacaaaaaaattaaaaATTTAAAA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e papAnu2.chr19 47372711 8656 + 51301725 I e macFas5.chr19 55282238 0 + 59248254 C e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=1043.000000 s hg38.chr19_GL949753v2_alt 349081 4 + 796479 ACAT s ponAbe2.chr19 56178584 4 + 60714840 ACAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3827174 2 - 59248254 --AT i macFas5.chr19 I 8331 C 0 s papAnu2.chr19 47381367 2 + 51301725 --AT i papAnu2.chr19 I 8656 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e calJac3.chr22 45601314 694 + 49145316 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=910.000000 s hg38.chr19_GL949753v2_alt 349085 1 + 796479 A s ponAbe2.chr19 56178588 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3827176 1 - 59248254 A i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47381369 1 + 51301725 A i papAnu2.chr19 C 0 I 2 s calJac3.chr22 3406110 1 - 49145316 A i calJac3.chr22 n 694 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e nomLeu3.chr10 102922007 0 - 106955855 C e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=36460.000000 s hg38.chr19_GL949753v2_alt 349086 34 + 796479 TATAGTGACATGAGATGTAGTGTGAAATGTCATT s ponAbe2.chr19 56178589 34 + 60714840 TATAGTGACATGAGATGCAGTGTGAAATGTCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921150 34 + 106955855 TAAAATGACATAAGATGCAACGTGAAATGTCATT i nomLeu3.chr10 I 9595 C 0 s macFas5.chr19 3827179 34 - 59248254 TAAAATGACATAAGATGCAACGTGAAACGTCATT i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47381372 34 + 51301725 CAAAATGACGTAAGATATAACGTGAAATGTCATT i papAnu2.chr19 I 2 C 0 s calJac3.chr22 3406111 34 - 49145316 TAAAATGACCTAAGATGCAATGTGAAATGTCCTT i calJac3.chr22 C 0 T 1917 e canFam3.chr1 19765369 1267 - 122678785 I e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=8867.000000 s hg38.chr19_GL949753v2_alt 349120 10 + 796479 AAAAGATGAG s ponAbe2.chr19 56178623 10 + 60714840 AAAAGATGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921184 10 + 106955855 CAAAGAGGAG i nomLeu3.chr10 C 0 T 1871 s macFas5.chr19 3827213 10 - 59248254 CAAAGAAGAG i macFas5.chr19 C 0 T 2713 s papAnu2.chr19 47381406 10 + 51301725 CAAAGAAGAG i papAnu2.chr19 C 0 T 2520 s calJac3.chr22 3404228 10 - 49145316 AAAAAAAAAG i calJac3.chr22 T 1917 C 0 e canFam3.chr1 19765369 1267 - 122678785 I e chlSab2.chr6 47077665 179 + 50890351 I e rheMac3.chr19 60181920 0 + 64156825 C e panTro4.chr19 59295696 0 + 63644993 C a score=109160.000000 s hg38.chr19_GL949753v2_alt 349130 36 + 796479 ---TTTGCATCagaatagtccaaacgtttcaaaaacatt s panTro4.chr19 4222789 36 - 63644993 ---TTTGCATCAGAATAGTCCAAACATTTTAAAAACATT i panTro4.chr19 I 12032 I 8 s ponAbe2.chr19 56178633 36 + 60714840 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919323 36 + 106955855 ---TTTGCATCAGAGTAGTCCAAACATTTCAAAAACATT i nomLeu3.chr10 T 1871 I 8 s rheMac3.chr19 3841062 36 - 64156825 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATC i rheMac3.chr19 I 5522 I 8 s macFas5.chr19 3824510 36 - 59248254 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i macFas5.chr19 T 2713 I 8 s papAnu2.chr19 3793071 36 - 51301725 ---tttgcATCAGAATAGTCCAAACATTTCAAAAACATT i papAnu2.chr19 I 5657 I 177 s chlSab2.chr6 3686712 36 - 50890351 ---TTTGCATCAGAATAGTCCAAACATTTCAAAAACATT i chlSab2.chr6 T 3677 I 8 s calJac3.chr22 3404238 39 - 49145316 CTTTTAGCATCAAAATAGTGAAAATATTTCAAAAACATT i calJac3.chr22 C 0 I 7 e canFam3.chr1 19765369 1267 - 122678785 I a score=425813.000000 s hg38.chr19_GL949753v2_alt 349166 164 + 796479 ccagcatgatcactgccttgctgaccagtcttcctcctgagacgtGGTGACAGTAATGATCACAAACTTGGATCTCGTGGACAGACAGGGGAATTCAAGCTAAACCCTGGTCCTCAAAGAGTTCTGCATGTTACAGTCCCTGGTATATCCTTCCAATCTAATCC s panTro4.chr19 4222833 164 - 63644993 CCATCATAATCACTGCATTGCAGACTAGTCTTCCTCCCGAGACGTGGTGGCTGTAATGATCTCAAGCTGGGATGTCATGGACGGACAGGGGAACTCAAGCTAAACCCTGGTCCTCAAAGAGTTTTGCACAATGCAGTCCCAGGTATGTTCTTCCAATCTAATCC i panTro4.chr19 I 8 C 0 s ponAbe2.chr19 56178669 164 + 60714840 CCAGCATGATCACTGCGTTGCTGACCAGTCCTCCTTCCGAGACGTGGTAACGGTAATGATCTCAAGCTTGGATCTCGCGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCAAAGAGTTCTGCACGTTGCAGTCCCTGATATGTCCCTCCAATCTAATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919367 164 + 106955855 CCATTATAATCAGTGCATTGCAGACTAGTCCTCCTCCCGAGACGTGGTGGCTGTAATGATCTCAAGCTGGGATGTTGTGGACAGACAGGGGAACTCGAGCTAAATCCTGGTCCTCAAAGAGTTCTGCACGATGCAGTCCCAGGTACGTTCTTCCAATCTAATCC i nomLeu3.chr10 I 8 C 0 s rheMac3.chr19 3841106 164 - 64156825 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCCGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCCAGAGCTCTGCATGATGCAGTCCCGGGTATGTTCTTTCAATCTAATCC i rheMac3.chr19 I 8 C 0 s macFas5.chr19 3824554 164 - 59248254 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCCGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCCAGAGCTCTGCATGATGCAGTCCCGGGTATGTTCTTTCAATCTAATCC i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47378896 164 + 51301725 CCAGCACGGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCATAATGATCTCAAGCTTGGACCTCCTGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCAGCACATTGCAATCCCGTGTCTTTCCTTCCAATTGAATCC i papAnu2.chr19 T 2520 C 0 s chlSab2.chr6 3686756 164 - 50890351 CCATCATAATCACTACATTGCAGACTAGTCCTCCTCCTGAGACGCGGTGACTGTAATGATCTCAAGCTGGGATCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCCAAGAGTTCTACATGATGCAGTCCCGGGTATGTTCTTCCAATCTAATCC i chlSab2.chr6 I 8 C 0 s calJac3.chr22 3404284 162 - 49145316 TCCACATGACCACTGCACTGCTGACGAGTCTCCCTCCCGAGACGTGGTGGCTGTCATGGTCTCAAGCTCGGATCTCGTGGACAGACAGGGGAACTGACGCTAAACCCTGGT-CTCACGGAGTTCTGCACATTGCAGTTCT-GATGCGTCCTTCCAACCTAATCC i calJac3.chr22 I 7 C 0 e canFam3.chr1 19765369 1267 - 122678785 I a score=5378.000000 s hg38.chr19_GL949753v2_alt 349330 5 + 796479 AATTT s panTro4.chr19 4222997 5 - 63644993 AACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178833 5 + 60714840 AATTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919531 5 + 106955855 AACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841270 5 - 64156825 AATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824718 5 - 59248254 AATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47379060 5 + 51301725 AATCT i papAnu2.chr19 C 0 I 1588 s chlSab2.chr6 3686920 5 - 50890351 AATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404446 4 - 49145316 ATCT- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766636 5 - 122678785 aaTAT i canFam3.chr1 I 1267 C 0 a score=257683.000000 s hg38.chr19_GL949753v2_alt 349335 79 + 796479 TCTGTGA--------------GTCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATGTTAAAG s panTro4.chr19 4223002 93 - 63644993 TCCGTGAATATGTTAGACTAAGTCCATAAGACAGCAATCCATC-CAAAAAATAACAA------TAAACCAACTAAAACTGCttaatataatatattaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178838 79 + 60714840 TCAATGA--------------GTCCATAAGACAGCAATCCATC-TAAAAAATGACAA------TAAACCAACTAAAACTGCTTAATATAATATGTTAAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919536 93 + 106955855 TCTGTGAATATGTTAGACTAAGTCCATAAGACAGCAATCCATC-GAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATATTAAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841275 93 - 64156825 TCTGGGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCttaatataatatattaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824723 93 - 59248254 TCTGTGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------CAAACCAACTAAAACTGCTTAATATAATATATTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793284 93 - 51301725 TCTGTGAATATGTTGGACTGAGCCCATAAGACAGcaatccatc-taaaaaataacaa------taaaccaACTAAAACTgcttaatataatatattaaaa i papAnu2.chr19 I 177 C 0 s chlSab2.chr6 3686925 93 - 50890351 TCTGTGAATATGTTAGACTGAGCCCATAAGACAGCAATCCATC-TAAAAAATAACAA------TAAACCAACTAAAACTGCTTAATATAATATATTAAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404450 91 - 49145316 TCTATGAATATGTTAGACTAAGTCCATGGGACAGCAATCCATC-TGAAGAA-GACAA------TTAACCAACT-AAACTGCTTCCTATAATATATTGAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766641 86 - 122678785 --------------TGGATAAGAATATGGACCAACACTCCATCTTCAATTATAACAATTATTTTTAAAAACCTAAAGCTGCTTGATATAATATTTTAAAG i canFam3.chr1 C 0 C 0 a score=4920.000000 s hg38.chr19_GL949753v2_alt 349414 8 + 796479 A-TT-TTTTA s panTro4.chr19 4223095 9 - 63644993 actt-tttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178917 8 + 60714840 A-TT-TTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919629 9 + 106955855 ACTT-TTTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841368 9 - 64156825 attG-TTTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824816 10 - 59248254 ATTATTTTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793377 10 - 51301725 ttttttttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3687018 10 - 50890351 ATTTTTTTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404541 8 - 49145316 A-TT-TTTTA i calJac3.chr22 C 0 I 7 e canFam3.chr1 19766727 0 - 122678785 C a score=54426.000000 s hg38.chr19_GL949753v2_alt 349422 29 + 796479 ggccgggtgcaatggctcacgcctgtaat s panTro4.chr19 4223104 28 - 63644993 ggacaggcgtggtggctcatgcctgtaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56178925 29 + 60714840 ggccgggcaccgtggctcacgcctgtaat i ponAbe2.chr19 C 0 I 1240 s nomLeu3.chr10 3919638 28 + 106955855 ggccgggcgcggtggctcatgcctgtaa- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841377 28 - 64156825 ggccagccacagtggctcacacctgtaa- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3824826 28 - 59248254 ggccagccacagtggctcacgcctgtaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793387 28 - 51301725 ggccaggcacagtggctcacgcctgtaa- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3687028 28 - 50890351 ggccaggtacagtggctcacgcctgtaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I a score=0.000000 s hg38.chr19_GL949753v2_alt 349451 2 + 796479 ct e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 56178954 1240 + 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919666 0 + 106955855 C e chlSab2.chr6 3687056 0 - 50890351 C e papAnu2.chr19 3793415 0 - 51301725 C e macFas5.chr19 3824854 0 - 59248254 C e rheMac3.chr19 3841405 0 - 64156825 C e panTro4.chr19 4223132 0 - 63644993 C a score=234892.000000 s hg38.chr19_GL949753v2_alt 349453 102 + 796479 tctcagcattttgggaggccgaggtgggcagatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatac-----aaaa s panTro4.chr19 4223132 104 - 63644993 tcccagcactttgggaggctgaggtgggcggatcacgaggcaaggagatcgagaccatcctggctaacacggtgaaaccccgtccctactaaaaatac---aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4402267 107 - 60714840 tcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtccctactaaaaatacaaaaaaaaa i ponAbe2.chr19 I 3323 C 0 s nomLeu3.chr10 3919666 106 + 106955855 tcccagcactttgggaggccgaggcgggcggatcacgaagtcaggagatcgagaccatcctggctaacacggtgaaaccccgtccctactaaaaatac-aaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841405 103 - 64156825 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacatggtaaaaccccgtccctactaaaaatac----aaaaa i rheMac3.chr19 C 0 I 9 s macFas5.chr19 3824854 102 - 59248254 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacatggtaaaaccccgtccctactaaaaatgc-----aaaa i macFas5.chr19 C 0 I 9 s papAnu2.chr19 3793415 106 - 51301725 ttccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacacagtaaaaccccgtccctactaaaaatac-aaaaaaaa i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 3687056 102 - 50890351 tcccagcactttgggaggccgaggcagccggatcacaaggtcaggagatcaagaccatcctggctaacacggtaaaaccccatccctactaaaaatac-----aaaa i chlSab2.chr6 C 0 I 7069 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I a score=273089.000000 s hg38.chr19_GL949753v2_alt 349555 157 + 796479 aattagccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgggaacccgggaggcggaggctgcagtgagccgagatcgtgccattgcactccagcctgggtgacagagccagactccatctaaaaaaa s panTro4.chr19 4223236 157 - 63644993 aattagccgggcgtggtggtgggtgcctgtagtcccagctactcgggaggctgaggcgagagaatggtgggaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgagagacagagccagactccgtctcaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 4402374 157 - 60714840 aattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgggaacctgggaggcggaggtcgcagtgagccgagatcgtgccactgcactccagcctgagagacagagccagactctgtctcaaaaaa i ponAbe2.chr19 C 0 n 0 s nomLeu3.chr10 3919772 157 + 106955855 aattagccgggcgtagtggcgggcgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgggaacccgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgagagacagagccagactctgcctcaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841517 157 - 64156825 aattagccactcgtggtagagggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatggtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa i rheMac3.chr19 I 9 I 25 s macFas5.chr19 3824965 157 - 59248254 aattagccaggcgtggtagcgggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatggtgccactgcactctagcctgggcaacagagcgagactccgtctcaaaaaa i macFas5.chr19 I 9 C 0 s papAnu2.chr19 3793530 157 - 51301725 aattagccaggcgtggtagcgggcgcctattgtcccagctactcaggaggctgaggcgggagaatggtgtgaacccgggaggtggagcttgcagtgagccgagatggtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa i papAnu2.chr19 I 9 I 32 e canFam3.chr1 19766727 0 - 122678785 C e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I a score=665.000000 s hg38.chr19_GL949753v2_alt 349712 4 + 796479 TATA s panTro4.chr19 4223393 4 - 63644993 tata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3919929 4 + 106955855 taaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3825122 4 - 59248254 aaca i macFas5.chr19 C 0 I 21 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e rheMac3.chr19 3841674 25 - 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 349716 2 + 796479 TA s panTro4.chr19 4223397 2 - 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3919933 2 + 106955855 ta i nomLeu3.chr10 C 0 I 12 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=91.000000 s hg38.chr19_GL949753v2_alt 349718 1 + 796479 t s panTro4.chr19 4223399 1 - 63644993 t i panTro4.chr19 C 0 I 7 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 349719 313 + 796479 tttttttaattttttttttttttttgagacagagtctcgctctgtcgcccaggccggactgcggactgcagtggcgcaatctcggctcactgcaagctccgcttcccgggttcacgccattctcctgcctcagcctccccagtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccttgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcc e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I e panTro4.chr19 4223400 7 - 63644993 I a score=91.000000 s hg38.chr19_GL949753v2_alt 350032 1 + 796479 T s panTro4.chr19 4223407 1 - 63644993 t i panTro4.chr19 I 7 C 0 e canFam3.chr1 19766727 0 - 122678785 C e ponAbe2.chr19 4402531 0 - 60714840 I e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=1638.000000 s hg38.chr19_GL949753v2_alt 350033 3 + 796479 AAT s panTro4.chr19 4223408 3 - 63644993 aat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180194 3 + 60714840 aat i ponAbe2.chr19 I 1240 C 0 s canFam3.chr1 19766727 3 - 122678785 AAT i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404549 7 - 49145316 I e nomLeu3.chr10 3919935 12 + 106955855 I e chlSab2.chr6 3687158 7069 - 50890351 I e papAnu2.chr19 3793687 32 - 51301725 I e macFas5.chr19 3825126 21 - 59248254 I e rheMac3.chr19 3841674 25 - 64156825 I a score=50103.000000 s hg38.chr19_GL949753v2_alt 350036 25 + 796479 TTTTTGTAATGCCTAAGAGATATAA s panTro4.chr19 4223411 25 - 63644993 tttttttaatGCCTAAGAGATATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180197 25 + 60714840 tttttttaatGCCTAAGAGATATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919947 25 + 106955855 TTGTTTTAATGCCTCAGAGATATAA i nomLeu3.chr10 I 12 C 0 s rheMac3.chr19 3841699 25 - 64156825 TTTTTTTAATGCCTCAAAGATATAA i rheMac3.chr19 I 25 C 0 s macFas5.chr19 3825147 25 - 59248254 TTTTTTTAATGCCTCAAAGATATAA i macFas5.chr19 I 21 C 0 s papAnu2.chr19 3793719 25 - 51301725 tttttttaatgCCTCAAAGATATAA i papAnu2.chr19 I 32 C 0 s canFam3.chr1 19766730 25 - 122678785 ATTCTCAAGTGCCTTAAAGATATGA i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404549 7 - 49145316 I e chlSab2.chr6 3687158 7069 - 50890351 I a score=62417.000000 s hg38.chr19_GL949753v2_alt 350061 24 + 796479 AAACTAAGTGAAGGCTATGCAGTC s panTro4.chr19 4223436 24 - 63644993 AAGCTAAGTGAAGGCTATGCAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180222 24 + 60714840 AAACTAAGTGAAGGCTGTGCAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919972 24 + 106955855 AAACTAAGTGAAGGCTGTGCAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841724 24 - 64156825 AAACTAAGTGAAGGCTGTGCAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825172 24 - 59248254 AAACTAAGTGAAGGCTGTGCAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3793744 24 - 51301725 AAACTAAGTGAAGGCTGTGCagtc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3404556 23 - 49145316 AAACTAAGTGAAGGCTTTG-AATC i calJac3.chr22 I 7 C 0 s canFam3.chr1 19766755 24 - 122678785 AAGCTATAGGGAGGCTAAATAGTC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3687158 7069 - 50890351 I a score=492807.000000 s hg38.chr19_GL949753v2_alt 350085 164 + 796479 AAAAGTTAAAGAAAGATGGAG-TCCCCAGCCTCAAGCTGAAT-ACTGAACCTGGAGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGAGG-A--CAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT s panTro4.chr19 4223460 164 - 63644993 AAAAGTTAAAGAAAGACGGAG-TCCCCAGCCTCAAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGAGG-A--CAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180246 164 + 60714840 AAAAGTGAAAGAAAGACGGAC-TCCCCAGACTCAAGCTGAAT-ACTGAACCTGATGCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCACGGGG-A--GAAGGATAAAGTGCAGGGGT---------------------ACAGATTC--------------------CAAAAGCTTCCACCTCATCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3919996 164 + 106955855 AAAAGTTAAAGAAAGACGGAA-TCCCCAGACTCAAGCTGAAT-ACTGAACCTGGTTCTCACCTTG-------ATGATGATGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCACGGGG-A--GAAGGATAAAGTGCAGGGGT---------------------ACAGATTT--------------------CAAAAGCTTCCACCTCATCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841748 164 - 64156825 AAAAATTAAAGAAAGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAGACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825196 164 - 59248254 AAAAATTAAAGAAAGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAGACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i macFas5.chr19 C 0 I 313 s papAnu2.chr19 3793768 164 - 51301725 aaaaattaaagaaagacgGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATAAGGAATTAACTGAGctttattttcatggttttgtAAATCATGGGG-A--GAAGCACAAACTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i papAnu2.chr19 C 0 I 313 s chlSab2.chr6 3694227 164 - 50890351 aaaaattaaagaaaGACGGAA-TCCCCAGACTCCAGCTGAAT-ACTGAACCTGGTGCTCACCTTG-------ATGATGAGGAATTAACTGAGCTTTATTTTCATGGTTTTGTAAATCATGGGG-A--GAAGCACAAAGTGCAGGGGT---------------------GCACATTC--------------------CAAAAGCTTCCAGCTCATCCT i chlSab2.chr6 I 7069 C 0 s calJac3.chr22 3404579 171 - 49145316 AAAAATTAAAGAAAGATGGAA-CCCCCAGACTCAAGCCGAAT-ACTGAAACTGCTTCTCACCTGACGATTATATGACTATGAA-TAACTGAACTTTATTTTCATGGTTATGAAGACCGTGGGGCA--GAAGGATAAAGGGCAGGGGT---------------------ACAGATTC--------------------CAGAAGCTTCCACCTCATTAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766779 205 - 122678785 AGAAATTAAAGGAAGTTGGGATTCCCCAGAGTCAAGCTGGATGGCTGAACCTGGCTCTCACCTTG-------ACGGTGATGAGGTA----AGTCTTCTCTCCCTGGCCTCACAGATCCTGGAG-GCTAAAGGCTAAAGCCCAGAGGTCACCCTGGTCGAGGAGTCTGGGGAGACTCTCCCTTTGCTAGGCCAGAATCTGAAGCTTCCATTTTATTGT i canFam3.chr1 C 0 C 0 a score=3501.000000 s hg38.chr19_GL949753v2_alt 350249 2 + 796479 AA s panTro4.chr19 4223624 2 - 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180410 2 + 60714840 AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920160 1 + 106955855 A- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841912 2 - 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825673 2 - 59248254 aa i macFas5.chr19 I 313 C 0 s papAnu2.chr19 3794245 2 - 51301725 aa i papAnu2.chr19 I 313 C 0 s chlSab2.chr6 3694391 2 - 50890351 AA i chlSab2.chr6 C 0 I 305 s calJac3.chr22 3404750 2 - 49145316 AA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766984 2 - 122678785 AA i canFam3.chr1 C 0 C 0 a score=30634.000000 s hg38.chr19_GL949753v2_alt 350251 10 + 796479 GAATGATTTC s panTro4.chr19 4223626 10 - 63644993 GAATGATTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180412 10 + 60714840 GAATGATTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920161 9 + 106955855 -GATGATTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3841914 10 - 64156825 GAATGATTTC i rheMac3.chr19 C 0 I 312 s macFas5.chr19 3825675 10 - 59248254 GAATGATTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794247 10 - 51301725 gaatgatttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694698 10 - 50890351 GAATGATTTC i chlSab2.chr6 I 305 C 0 s calJac3.chr22 3404752 10 - 49145316 GAATGAATTA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766986 10 - 122678785 GAGTGAACTG i canFam3.chr1 C 0 C 0 a score=13104.000000 s hg38.chr19_GL949753v2_alt 350261 4 + 796479 AAAT s panTro4.chr19 4223636 4 - 63644993 AAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180422 4 + 60714840 AAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920170 4 + 106955855 AAAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3825685 4 - 59248254 AAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794257 4 - 51301725 aaaT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694708 4 - 50890351 AAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404762 4 - 49145316 AAAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19766996 4 - 122678785 AAAT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 3841924 312 - 64156825 I a score=264089.000000 s hg38.chr19_GL949753v2_alt 350265 108 + 796479 CACTCACCAACTTCTCATGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATTGAACATGAGGCCAAAACACAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTCT s panTro4.chr19 4223640 108 - 63644993 CACTCACCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTCTGAAACTTAGCATTGAACACGAGGCCAAAACACAGTGGCTCCTG-AGAATGACCTTC-------------------CTGCTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180426 102 + 60714840 CACTCACCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATTGAACACAAGGCCAAAACACAGTGGCTCC-------TGATTTTC-------------------CTGCTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920174 108 + 106955855 CACTCACCAACTTCTCGTAGTTGCAAGGAATACGACATCTGTTTTGAAACTTCGCCTTGAACCCGAGGCCAAAACACAGTGGTTCCTG-AGAATGACTTTC-------------------CTGCTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842236 95 - 64156825 CACTCTCCAGCTTCTCGTGGTTGCAAGGAATACTACATTTGTTTGGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTCT i rheMac3.chr19 I 312 C 0 s macFas5.chr19 3825689 95 - 59248254 CACTCTCCAGCTTCTCGTGGTTGCAAAGAATACTACATTTGTTTGGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTT-------------------CTGCTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794261 95 - 51301725 CACTCTCCAACTTCTCGTGATTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATC-------------AAACCAAGTGGCTCCTG-AGAATGACTTTC-------------------CTGCTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694712 95 - 50890351 CACTCTCCAACTTCTCGTGGTTGCAAGGAATACTACATTTGTTTTGAAACTTAGCATC-------------GAACCAAGTGGCTCCAG-AGAATGACTTTC-------------------CTGCTTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3404766 108 - 49145316 CACTCTCCAACTTCTCAAGGTTGCAAGGGATACTACATTTGTTCTGAAACTTAACATTCAACAGGAGGCCAAAACAAAGCTGCTCCTG-AGAATGACTTTC-------------------CTGCTCCT i calJac3.chr22 C 0 I 268 s canFam3.chr1 19767000 110 - 122678785 TACTCACCCATCTCTAAGGGCTGTCAAGAATACG-----TGTTTTGAAAC------------AGGAGGCCAAAAC-TGCTTGCTCTTGAAAAATGACCTACACCAGCCAGCCCCGCGAATCTGCACCT i canFam3.chr1 C 0 C 0 a score=39897.000000 s hg38.chr19_GL949753v2_alt 350373 17 + 796479 GACTCTTCTTTTACTGG s panTro4.chr19 4223748 17 - 63644993 GACTCTTCTTTCACGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180528 17 + 60714840 GACTCTTCTTTCACGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920282 17 + 106955855 GACTCTTCTTTCACGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842331 17 - 64156825 GACTCTTCTTTTACTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825784 17 - 59248254 GACTCTTCTTTTACTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794356 17 - 51301725 GACTCTTCTTTTACTTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694807 17 - 50890351 GACTCTTCTTTTACTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767110 17 - 122678785 TCCTCATCTTTTTTCTC i canFam3.chr1 C 0 C 0 e calJac3.chr22 3404874 268 - 49145316 I a score=83361.000000 s hg38.chr19_GL949753v2_alt 350390 42 + 796479 -CATAATGGTTTCTATGCATTAGATTATCCTCCCTGCCTCTTT s panTro4.chr19 4223765 42 - 63644993 -CAGAATGGTTTCTATGTATTAGATTCTCCCCTCTGCCTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180545 42 + 60714840 -CAGAATGGTTTCTATGTATTAGATTCTCCCCCCTGCCTCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920299 42 + 106955855 -CAGAATGGTTTCTATGTATTAGATTCTCCTCCCTGCCTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842348 41 - 64156825 -CAGGATGGTTTCTCTGTAGGAGAGTCTCCT-TCAGCGATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825801 41 - 59248254 -CAGGATGGTTTCTCTGTAGGAGAGTCTCCT-TCAGCGATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794373 41 - 51301725 -CAGAATGGTTTCTCTGTAGGAGAGTCTTCT-TCAGTGATTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694824 41 - 50890351 -CAGAATGGTTTCTCTGTAGGAGAATCTCCT-TCAGCGATTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405142 42 - 49145316 -CAGAATGGCTTCTGTGTATTGGATTCTCCTCCCTGCCTCTTT i calJac3.chr22 I 268 C 0 s canFam3.chr1 19767127 43 - 122678785 TGTGTGTGTTCCCCCTGGGATCTATTTGTCtctctgtctctgt i canFam3.chr1 C 0 I 62 a score=132458.000000 s hg38.chr19_GL949753v2_alt 350432 61 + 796479 TCACTTTAGGTCTTCATTAGTGAtttttattcagctttatcaaaggatcctttgcacacaa s panTro4.chr19 4223807 61 - 63644993 TCACTTTAGGTCTTCATTAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180587 61 + 60714840 TCACTTTAGGTCTTCATTAGCGAtttttattcagctttatcaaagaatcctttgcacacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920341 61 + 106955855 TCACTTTAGGTCTTCATTAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842389 50 - 64156825 TCACT-----------TCAGCGAtttttaatcagctttatcacggaatccttggcagacaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3825842 50 - 59248254 TCACT-----------TCAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3794414 50 - 51301725 TCACT-----------TCAGCGATTTTTAATCAGCTTTATCAAGGAATCCTTGGCAGACAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694865 50 - 50890351 TCACT-----------TCAGCGAtttttaatcagctttatcaaggaatccttggcagacaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405184 61 - 49145316 TCCTTTTAGATCTTCATTAGGGAtttttaatcagcgttatcaaggattaatttgcaaaccg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19767170 62 - 122678785 I a score=237619.000000 s hg38.chr19_GL949753v2_alt 350493 84 + 796479 actgcatccacttaatctgtgcaattcagtgaattctgac-agctgtgaaaccaccaacatatccaagattttcttcactgctca s panTro4.chr19 4223868 84 - 63644993 actgccttctttgaatctgtgcaattcagtgaattctgac-agttgtgaaaccaccaacatatccaagatTTTCCTCACTACTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180648 84 + 60714840 actgcatccacttaatctgtgcaattcagtgaattctgag-agttgtgaaaccaccaacatatccaagatttttttcactactca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920402 84 + 106955855 actgccttcattgaatctgtgcgattcagtgaattctgac-agttgtgaaaccaccaacatatccaagatTTTCCTCACTACTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3842439 84 - 64156825 actaccttcattgaagctgtgcaactcagtgaattctgac-agctgtgaaaccaccaacatagccaagaGTTTCCTCACTTCTCA i rheMac3.chr19 C 0 I 5929 s macFas5.chr19 3825892 84 - 59248254 actgccttcattgaagctgtgcaactcagtgaattctgac-agctgtgaaaccaccaacatagccaagAGTTTCCTCACTACTCA i macFas5.chr19 C 0 I 8745 s papAnu2.chr19 3794464 84 - 51301725 ACTGCCTTCATTGAAGCTGTGCAATTCAGTGAATTCTGAC-AGCTGTGAAACCACCAACATAGCCAAGAGTTTCCTCACTACTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694915 84 - 50890351 actgtcttcattgaagctgtgcaattcagtgaattctgac-agctgtgaaaccaccaacatagccaagagtttcctcactactca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405245 84 - 49145316 atggcatccgtttaatctgtgcaattcggtgaattctgac-agctgtgaaaccaccaacatatccaagatcttcatcactactca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19767232 77 - 122678785 ATTGCCTCCTTT----CTCTGCAACTCTG-GCTTGCTCACTAGCTGT--CCTCAGCATCATGGCC-TGGTCCCCTGCTTTGCTTT i canFam3.chr1 I 62 C 0 a score=23535.000000 s hg38.chr19_GL949753v2_alt 350577 13 + 796479 gaagattcctcat s panTro4.chr19 4223952 13 - 63644993 GAAGATTCCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56180732 13 + 60714840 gaagattcctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920486 13 + 106955855 GAAGATTCCTCCT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 3794548 13 - 51301725 GAAGATTCCTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3694999 13 - 50890351 gaagattcctcgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405329 13 - 49145316 aaagattcctcgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19767309 11 - 122678785 --GCAATCCTTAT i canFam3.chr1 C 0 C 0 e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=3065.000000 s hg38.chr19_GL949753v2_alt 350590 3 + 796479 gct s panTro4.chr19 4223965 3 - 63644993 GCT i panTro4.chr19 C 0 n 0 s ponAbe2.chr19 56180745 3 + 60714840 gct i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3794561 3 - 51301725 GCT i papAnu2.chr19 C 0 I 2044 s chlSab2.chr6 3695012 3 - 50890351 gcT i chlSab2.chr6 C 0 I 1091 s canFam3.chr1 19767320 1 - 122678785 --T i canFam3.chr1 C 0 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=7744.000000 s hg38.chr19_GL949753v2_alt 350593 98 + 796479 cctt-------tgCCTCC--------ATGTGGCCACTGGTTCCTTTTTGATAT-GTATTTGTTGACTGatttatttatttatttatttatttatatatttattttgagactgag s ponAbe2.chr19 56180748 86 + 60714840 cctt-------tgCCTCC--------ATGTGGCCACTGGTTCCTTTTTGATAT-GTATTTGTTGACt------------tatttatttatttatatatttattttgagactgag i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19767321 114 - 122678785 CCCTGGAGTAATGCCTCCCACGAACAAAATCCTCCCTGCTCCGTTTTTTGCATAGTCTTttttttttaaagattttatttatttattcatagacacagaaagagagaggcagag i canFam3.chr1 C 0 I 347 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e chlSab2.chr6 3695015 1091 - 50890351 I e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 0 - 63644993 I a score=10736.000000 s hg38.chr19_GL949753v2_alt 350691 124 + 796479 tttcactcttgttgcccaggctggagtgtaatggtgcaatcttggctcccgggttcaagcgattctcctgtctcggcctcctgagtagctgggattacaggtgcgcaccaccatgcccagctaa s ponAbe2.chr19 56180834 124 + 60714840 tttcactcttgttgcccaggctggagtgcaatggtgcgatctctgctcccgggttcaagcgattctcctgtctctgcctcctgagtagctgggattacaggcacgcaccaccatgcccggctaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e chlSab2.chr6 3695015 1091 - 50890351 I e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 0 - 63644993 I a score=14419.000000 s hg38.chr19_GL949753v2_alt 350815 69 + 796479 ttttgtatttttagtagagacggggtttctccatgttggtcaagctggtctcgaactcccgacctcagg s ponAbe2.chr19 56180958 69 + 60714840 ttttgtatttttagtagagacagggtttctccatgttggtcaggctggtctcaaactcccaacctcagg i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47077844 67 + 50890351 ttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgtcctcg-- i chlSab2.chr6 I 179 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I e panTro4.chr19 4223968 0 - 63644993 I a score=30478.000000 s hg38.chr19_GL949753v2_alt 350884 59 + 796479 tgatccgcccaccttggcatcccaaagtgctgagattacaggcgtgagccactgcaccc s panTro4.chr19 59295696 59 + 63644993 tgatccgcccaccttggcctcccaaagtgctgagattacaggcatgagccaccgcaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181027 59 + 60714840 tgatccacccaccttggcctcccaaagtgctgagattacaggcgtgagccaccgcaccc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47077911 59 + 50890351 tgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcaccg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I e macFas5.chr19 3825976 8745 - 59248254 I e rheMac3.chr19 3842523 5929 - 64156825 I a score=15329.000000 s hg38.chr19_GL949753v2_alt 350943 12 + 796479 ggccGACTAATT s panTro4.chr19 59295755 12 + 63644993 ggcTGACTAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181086 12 + 60714840 agccGACTAATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181920 12 + 64156825 ggcTGACTAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282238 12 + 59248254 ggcTGACTAATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47077970 12 + 50890351 ggccGACTAATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19767435 347 - 122678785 I e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I a score=63039.000000 s hg38.chr19_GL949753v2_alt 350955 41 + 796479 CATtttttaaacacacttcttacctgggaataaatttaaac s panTro4.chr19 59295767 41 + 63644993 CATtttttaaacacacttcttacctgggaataaatttaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181098 41 + 60714840 AATtttttaaacacacttctcacctgggaataaatttaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181932 41 + 64156825 TATttcttaaacacacttcttacctgggaataaattcaaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282250 41 + 59248254 TATttcttaaacacacttcttacctgggaataaattcaaat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47077982 41 + 50890351 CATtttttaaacacacttcttacctgggaataaattcaaat i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767782 41 - 122678785 CATtttttaaacaaacgtcttaccctaaaataacgctagat i canFam3.chr1 I 347 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C e papAnu2.chr19 3794564 2044 - 51301725 I a score=729294.000000 s hg38.chr19_GL949753v2_alt 350996 357 + 796479 ttgcaaaagagttgcagaggtacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacacgaccccagcacatccgccaaaaaaaaaaaaaaattaacactggtacaataatt----aactgacaggctttctttggatttcatcatcttt----ccactaacgttctttgcctgtgctgggatccaatgcaggGGCACCGTcctgcatttacttccctctctgtt--aactgcagagaagggtttctgttttcctggttggaccctgattaataTTCCCCTAGTATCTGAACTCCAGGTGCCCAGGAAGGTTGGGGGGCAAGGATGTGCTGCCCACTGGGGA-AGGAGTG s panTro4.chr19 59295808 353 + 63644993 ttgcaaaagagttgcagagatacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacatgaccccagcacatccgccaaaaaaaaaaa----ttaacactggtacaataatt----aagtgacaggctttctttggatttcatcatcttt----ccactaacgttctttgcctgtgctgggatccaatgcaggGGCACTGTcctgcatttacttccctctctgtt--aactgcagagaagggtttctgttttcctggttggaccctgattaataTTCCCCTAGTATCTGAACTCCAGGTGCCCAGGAAGGTTGGGGGGCAAGGGTGTGCTGCCCACTGGGGA-AGGAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181139 355 + 60714840 ttgcagaagagttgcagagatacagagagttcccatatgcccttcatccaggtccctctaatgttcatgctttacacgaccccagcacatccgccaaaaagaaaaa-aaattaacactggtacaataatt----aaatgatgggctttctttggatttcatcaccttt----ccactaacgttctttgcctgtgctgggatccaatgcaggGGCACCGTCCT-catttacttccctctctgtt--aactgcagagaagggtttctgttttccttgttggaccttgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTTTGCTGCCCACTAGGGA-AGGTGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60181973 356 + 64156825 ttgcagaagagttgcagagatacagagagttcctatatgcccttcattcagatccttctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatta---aaatgacaggttttatttagatttcatcaccttt----ccactaatgttctttgcctgtgctgagatccaatgcaggGGCACCATcctgcctttacttccctctctgtt--aactgtagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282291 356 + 59248254 ttgcagaagagttgcagagatacagagagttcctatatgcccttcattcagatccttctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatta---aaatgacaggctttatttagatttcatcaccttt----ccactaatgttctttgcctgtgctgagatccaatgcaggGGCACCGTcctgcctttacttccctctctgtt--aactgtagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47380653 355 + 51301725 TTGCAGAAGAGTTGCAGAGATACAGAGAGTTCCCGTATGCCCTTCATCCAGATCCCTCTAATGTTCATGCTTTACACGACCCCAGCACATctgccagaaagaaaaa--aattaacactgaTACAATAATT----AAATGACAGGCTTTATTTAGATTTCATCACCTTT----CCACTAATGTTCTTTGCCTGTGCTGGGATCCAATGCAGGGGCACCGTCCTGCCTTTACTTCCCTCTCTGTT--AACTGTAGAGAAGGGTTTCTGTTTTCCTAGTTGGGCCCTGATTAATATTCCCCTAATATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAAGGTGTGGTGCCCACTAGGGA-AGGAGTG i papAnu2.chr19 I 1588 C 0 s chlSab2.chr6 47078023 355 + 50890351 ttgcagaagagttgcagagatacagagagttcccagatgcccttcatccagatccctctaatgttcatgctttacacgaccccagcacatctgccagaaagaaaaa--aattaacactgatacagtaatt----aaatgacaggctttatttcgatttcatcaccttt----ccactaatgttctttgcctgtgctgggatccaatgcaggGGCACCGTcctgcctttacttccctctctgtt--aactgcagagaagggtttctgttttcctagttgggccctgattaataTTCCCCTAGTATCTGAATACCAGGTGCCCAGGAAGGATGGGGGGCAAGGGTGTGGTGCCCACTAGGGA-AGGTGTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19767823 351 - 122678785 ttgcagagaagttgcaaagccccagagagttcccacatgcccttcatccaga-ctctctaacatcaatattttgcataaccaggccccatctgtcaaaaccaagca---attaacattgatacagtaattaactaaactacagactgtatttggatgttatccattttttccccgctaatgttctttccctgtgccaggattcaattcagagt--acATATtgcattgacttctttctctttttcaaatacataaaagactttctgttttcctggttggatcctaattaatacTCTCAACATACCTGCATA-----TGCCCAGGAA-GATGTGGG-----GATGGGTTGGCAACTTAGAATAGGAATG i canFam3.chr1 C 0 C 0 e calJac3.chr22 3405342 0 - 49145316 C e nomLeu3.chr10 3920499 0 + 106955855 C a score=614271.000000 s hg38.chr19_GL949753v2_alt 351353 244 + 796479 GCTGGCAGAATCGACATCCGTCTGTTCCTCCACAATCCAAGGTCACAGAACACAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTAT--GAGGACCCCTCCACCTTTGCATTCCTCTAAGACCTTTCCTCTGAGACTCTC-CTCCA-AGCTGGAGAAGACAAGCTACATGCTTATGTCCAAGGCATGCTGCAGATTCAGCATGGCACAGCTCCCTCA s panTro4.chr19 59296161 244 + 63644993 GCTGGCAGAATCGACATCCGTCGGTTCCTCCACAATCTAAGGTCACAGAACCCAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTGT--GAGGACCCCTCCACCTTTGCATTCCTCTAAGACCTTTCCTCTGAGACTCTC-CTCCA-AGCTGGAGAAGACAAGCTACATGCTTATGTCCAAGGCATGCTGCAGATTCAGCACGGCACAGCTCCCTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181494 246 + 60714840 GCTGGCAGAATCGACATCTGTCGGTTCCTCCACAGTCTAAGGTCACAGAACACAT--GGGCAGTTATTCTGGG----TTTTTCCATAAGAAGGGTGATACAGAGCTGTCGTTGTTCCATATTATCAGAGGACCCCTCCACCTTTGCATTCCTCTAAGACTTTTCCTCTAAGACTTTC-CTCCA-AGCTGGAGAAGGCAAGCTACACGCTTATGTCCAAGGCATGCTGCAGACTCAGCACGGCACAGCTTCCTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920499 202 + 106955855 GCGGACAGAATCGAC-------------------GTCAAAGGTCACAGAACACGT--GGGCAGTTATTCTGGG----GTTTTCCGTAAAAGGGGTGATGCAGAGCTGTCATCGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTA-ATCCC-AGCTGGAGA-----------ATGTCTGTGTCCAAGACATGCTACACATTCAGAACATCACAGCTTACTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60182329 232 + 64156825 GCTGGCAGAATCGGCATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAACAT--GGGCAGTTACTCTGGG----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282647 232 + 59248254 GCTGGCAGAATCGGCATCTGTCGGTTCCTCCATAATCTAAGGTCACAGAAAGCAT--GGGCAGTTACTCTGGG----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGTCACAGCGTCCTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381008 232 + 51301725 GCTGGCAGAATGGAAATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAGCAT--GGGCAGTTATTCTGGA----TTTTTCCATAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCGCCTTTGCACTCCTCTA--------------AGACTTTG-ATCCC-AGCTGGAGAAGGCAAGCTATATGCTTATGTCTAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078378 233 + 50890351 GCTGGCAGAATGGACATCTGTCGGTTCCTCCACAATCTAAGGTCACAGAAAACAT--GGGCAGTTATTCTGGA----TTTTTCCGTAAGAGGGGTGATACAGAGCTGTCGTTGTTCCATATTCTCAGAGGGCCCCTCCACCTTTGCATTCCTCTA--------------AGACTTTTCCTCCA-AGCTGGAGAAGGCAAGCTATATGCTTATGTCCAAGGCATGCCACAGACTCAGCACGGCACAGCGTCCTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405342 199 - 49145316 gctGACAGAATCCAC-------------------ATCAAAGGTCACAGAGCACAT---GGCAGTTATTCTGGG----TTTTTCCATA--AAGGGTGACACAGATCTGTCTCAGTTCCATATTCTCAGGGGGCCCCTTCACCTTTGCATTCCTCCA--------------AGACTTTG-ATCTC-AGCTGGAGAAG-----------GTTTAGGTTCAAGGTGTGCTACAGATCCAGCCTGGCACAGCTTCCTCA i calJac3.chr22 C 0 I 438 s canFam3.chr1 19768174 226 - 122678785 GCTGAAAGCACCAGTA-CTATAGGCTCCTCAGAAAACTGAGGTCATAGTGTCTATCAAGTTGGCTATTCTGGGTGGTTTTTTAGTTAGGGAAGGTGATGGGTAGCTATCATCCCTCACTCCTCTTAGAAAGCCCCTCAGCCTTTGTATTCTTCTA--------------AAATTTTT-ATCCCAAACTGGAGA-----------ATATTGATGT-TAAGGCTCAGTATGGGATAAGCAGAGCACACCTTCCTCC i canFam3.chr1 C 0 C 0 a score=31275.000000 s hg38.chr19_GL949753v2_alt 351597 9 + 796479 CTCAAAAAC s panTro4.chr19 59296405 9 + 63644993 CTCAAAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181740 9 + 60714840 CTCAAAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3920701 9 + 106955855 CTCAAAAAT i nomLeu3.chr10 C 0 I 307 s rheMac3.chr19 60182561 9 + 64156825 CTCAAAAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282879 9 + 59248254 CTCAAAAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381240 9 + 51301725 CTCAAAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078611 9 + 50890351 CTCAAAAAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405979 9 - 49145316 CTCAAAAAC i calJac3.chr22 I 438 C 0 s canFam3.chr1 19768400 9 - 122678785 AGCAAAACC i canFam3.chr1 C 0 C 0 a score=484979.000000 s hg38.chr19_GL949753v2_alt 351606 171 + 796479 GTTACTTGATGTGGGATGCACAGGCATAGAGTAGTGATTCTCACACTAGACTCAGATACATACACAATATTTGCAACTTAAAT-----TAAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAATAAAATGACACAAGATGCAATGTGAAATGTCATTAAAAGAAGA s panTro4.chr19 59296414 176 + 63644993 GTTACTTGATGTGGGATGCACAGGCATAGAGTAATGATTCTCACACTAGACTCAGATACATACACAATATTTGCAACTTAAATCAAATTAAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAATAAAATGACACAAGATGCAATGGGAAATGTCATTAAAAGAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181749 176 + 60714840 GTTACTTGGTGAGGGATGCACAGGCATGAAGTAATGATTCTCACACTAGATTCAGATACATACACAATATTTGCAACTTAAATCCGATTAAATACCAATTAAAAGTCAAGTGGAAAGACAACATCTACATAAATAAAATGACATAAGATGCAACGTGAAATGTCATTAAAAGAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921017 176 + 106955855 GTTACTTGGTGTCGGATGCACGGGCATGGAGTAATGATTCTCACACCAGACTCAGATACATACACAATATTTGCAACTTAAATCAAATTGAACACCAATTAAATGTCAAGTGGAAAGACAACATCTACAGAAGTAAAATGACATAAGATGCAACGTGAAATGTCATTCAAAGAGGA i nomLeu3.chr10 I 307 C 0 s rheMac3.chr19 60182570 166 + 64156825 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCTCACACTAGACTCAGATACACACACTATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACGACATCTGCATAAACAAAATGACGTAAGATACAACGTGAAACGTCATTCAAAGAAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55282888 166 + 59248254 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCCCACACTAGACTCAGATACACACACAATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACGACATCTGCATAAACAAAATGACGTAAGATACAACGTGAAACGTCATTCAAAGAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381249 166 + 51301725 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAATGATTCTCACACTAGACTCAGATACACACACTATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGCAAAGACAACATCTGCATAAACAAAATGACGTAAGATATAACGTGAAATGTCATTCAAAGAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078620 166 + 50890351 GTTACTTGGTGTGGGATGCACAGGCATGGAGTAACGATTCTCACACTAGACTCAGATACACACACAATATTAGCGACT----------TAAACACCAATTAAATGTCAAGTGGAAAGACGACAACTGCATAAACAAAATGACGTAAGATACAACGTGAAATGTCATTCAAAGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3405988 161 - 49145316 -----ATGACTTGGGATGCACAGGCATGGAGTAACAATTCTCACACTAGATTCAGATACATACATAATATTTGAAAAAAAAAT-----TACATACCAATTAAACGTCAGGTGGAAACACGACATCTACATGAATAAAATGACCTAAGATGCAATGTGAAATGTCCTT-----AACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19768409 140 - 122678785 -TTTCCT-------------------TGGACTGATGTTTCCTTTAATAGATTCGGATACATATAC---ATTTGCTGAT----------TAAATATAAGCTAAATGTT---TGCAAAGGCAAAATCTATAGAAATACAGTGATATAAGATGCAACATGAAATGTTACTAAAAGGTGA i canFam3.chr1 C 0 I 547 a score=506988.000000 s hg38.chr19_GL949753v2_alt 351777 163 + 796479 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCA--CGTCACTGCGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCCGGTCCTCAC--AGTTCAGCAC s panTro4.chr19 59296590 163 + 63644993 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCA--CGTCACTGCGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCCGGTCCTCAC--AGTTCTGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56181925 164 + 60714840 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCAC-CATCACTGTGTTGCTGACCTATCTTCCTCCTGAGATGTGGTCGCCATAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTTGTCCCCAC--AGTTTTGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921193 163 + 106955855 GTTTGCATTAGAATACTTCAAATATTTCAAAACTATTCCAGCA--CATCACTGCACTGCTGACCTATCTTCCTCCTGAGATGTGGTCACCGTAATGATCTCAAGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCAC--AGTTCTGCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60182736 166 + 64156825 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTATTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAGTGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283054 166 + 59248254 GTTTGCATTAGAATAGTTCAAATATTTCAAAACTGTTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAGTGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381415 166 + 51301725 GTTTACATTAGAATagttcaaatatttcaaaactgtTCCAGCAC-GGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACGTGTGGTTGCCATAATGATCTCAAGCTTGGACCTCATGGACAGACAGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTCGGCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078786 166 + 50890351 GTTTGCATTAGAATAGTTTAAATATTTCAAAACTGTTCCAGCAC-AGTCACTGCGTTGCTGACCAGTCTTCCTCCTGACATGTGGTTGCCGTAATGATCTCAGGCTTGGACCTCGTGGACAGACTGGGGAACTCAAGCTAAACCCTGGTCCTCACAGAGTTTGGCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3406149 166 - 49145316 GTTTGCATTAGAATAGTTCAAATATTTCAAAAATATTCCAGTAT-GGTCACTGTGTTGCTGACCAGTGTTTCTCGTGAGATGTGGTCGACGTAATGATCCCAAGCTTGGACCTCATGGACAGACCGGGGGACTCAAGGTAAGCCCTGGTCCTCACAGAATTCTgcac i calJac3.chr22 C 0 I 35 s canFam3.chr1 19769096 149 - 122678785 GTTCACATCAGAATAACCCAACTATTCAAAAAATACCACAGCGTGGGTCACTCCTTGA--GATCAG---TCCTCCCGGGACTTTGATGGGGTAAT-------------GACCTCATAGACGCCTTGTGGTTCCCGAGCTGGATCCTAGTCCTCAGAAGGTTCTGCAC i canFam3.chr1 I 547 C 0 a score=1686125.000000 s hg38.chr19_GL949753v2_alt 351940 686 + 796479 GTTGCAATCCTGTGTCGTTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCACGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGTGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGTCGCGGATG--------------CAACCCTGGAAGGAAGACCTCAGGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-GCCTGGCTTTGTCCTGAATATTAGCCTTGGCAGCCTGGCCTGGGCTCCGATGGTGGATGAACTTGGCTTTCCACGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACAGTATTTTAACCTTGTCCTCCTTTCCCTTCCAGGGTTTACCAAGACATAGCGGGTGTCATAGATGTGAAAAAGCTTCTGCTATACCAGGGTCAGGAACGGAGCAAAACTGAAAACCGCACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCCTTAAGAAGCTC-CAGCCGCAGGCACGGAAATAAA s panTro4.chr19 59296753 686 + 63644993 ATTGCAATCCTGTGTCGTTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCAGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCACGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------CAACCCTGGAAGGAAGACCTCAAGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-GCCTGGCTTTGTCCTGAATGTTAGCATTGGCAGCCTGGCCTGGGCTCTGATGGTGGATGAACTTGGCTTTCCACGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACAGTATTTTAACCTTGTCCTCCCTTCCCTTCCAGGGTTCACCGAGACATAGCAGGTGTCATAGGTGTGAAAAAGCTTCTGCTATACCAGGGTCAGGAATGGAGCAAAACTGAAAACCGCACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCCTTAACAAGCTC-CAACTGCAGGCACGGAAATAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56182089 687 + 60714840 ATTGCAATCCTGTGTGGTTCCAT------CCA-------ATCTAATCCAATCTCAAGGACCCTATTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGTCATCCACATTGGCTCATGTTTCTGTGCCCCACCCTTCCTGCCTGGGAGGACCCTTCTTGTTCAGCCAAAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------CAACCCTGGAAGGAAGACCTCAGGACGATGAT-CATCTTCATAGGATTCC---CGACCTGT-CCCTGGCTTTGTCCTGAATATTAGCCGTGGCATCCTGGCCTGGGCTCCGATGGTGGATGAACTTGGCTTTCCATGGGCTGCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTTGGAACAGTATTTTAACCTTGCCCTCCTTTCCCTTCCAGGGTTTACCAAGACATAGCAGGTGTCATAGATGTGAAACAGCTTCTGCTATACAAGGGTCAGGAACTGAGCAAAACTGAAAAACACACAGGATGTCGTCTGCCAGGTGCCAGCATCACAGCTCAAATCTTTAACAAGGTC-CAACCACAGGCACGGAAATAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3921356 686 + 106955855 ATTGCAATCCTGTGTCATTCCGT------CCA-------ATCTAATCCAATCTCAAGGACCCCAGTTCCTGAGCAACCCTGGCTTGGCTCGGCCAAAGGGAAGCGTCTACAGAATCTGAGTCTAGAATGCCCGGAGGTCTGTACTTCTTGCTGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAAGCCATCCACATTGGCTCACGTTTCTGCACCCCACCCTTCCTACCTGGGAGGACCCTTCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGGGGTGGTAGCAGGGACTCACCCATTTCTCTTTCCATCTTCTGGCCCGGATG--------------GAACCCTGGAAGGAAGACCTCAAGATGATGAT-CATCTCCACAGGATTCC---CCACCTGT-CCCTGGCTTTGTCCTGAATATCAGCCTTGGCAGCCTGGCCTGGGCTCCCCTGGAGGATGAACTTGGCTTTCCACAGGCTGCCACCTCCAGCCTGCACTGTGGAGAGACCAGGTCCTCGGAACAGCATTTTAACCTTGTCCTCTCCTCTCTTCCAGGGTTTACCAAGACATAGCAGGTGTCATAGAAGTGAAAAAGCTTCTGCTGTACCAAGGTCAGGAATTGAGCAAAACTGAAAAACACACAGGATGTGGTCTGCCAGGTGCCAGCATCACAGCTCAAATCTTTAACAAGGTC-CAACCACAGGCACGGAAATAAA i nomLeu3.chr10 C 0 I 8033 s rheMac3.chr19 60182902 685 + 64156825 ATTGCAACCCTGTGTCTTTCCTT------CCA-------ATAGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAGGTGTCTAGAGAATCTGAGTCTAGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCACGTCTCTGGCCATCTTCAGGCCCGGATG--------------GAGCCCTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTTGGCGGCCTGGCCTGGGTTCCGATGCTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCGTATTTTAACCTTGTCCTCCCTTCCCTTCCGGGGTTTACCAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCCAAGGATGTGGTCCGCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGGTC-CAACCGCAGGCACGGAAATAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283220 685 + 59248254 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATAGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAGGTGTCTAGAGAATCTGAGTCTAGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCATGTCTCTCGCCATCTTCGGGCCCAGAGG--------------GAGCCCTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAACATTAGCCTTGGCGGCCTGGCCCGGGTTCCGATGCTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCGTATTTTAACCTTGTCCTCCCTTCCCTGCCGGGGTTTACCAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCACAGGATGTGGTCTCCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGGTC-CAACCGCAGGCACGGAAATAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47381581 684 + 51301725 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATCGAATCCAATCTCAAGGTCCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAAGTGTCTAGAGAATCTGAGTCTCGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCACATTTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-AAAAAAG--CAACCTGAGGGTGAGGTGGTAGCAGGGACTCACCCATGTCTCTCGCCATCTTCGGGCCCCGATG--------------GAGCCGTGGAAGGAAGACCTCAAGACGATGGT-CATCTCCACAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTCGGCGGCCTGGCCCGGGTTCCGATGGTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGAGACCAGGTCCTCGGAACCCTATTTTAACCTTGTCCTCCCTTCCCTGCCAGGGTTTACGAAGACATAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGTAAAACAG-AAAATGCCCAGGATGTGGTCCGCCAGGTGCTAGCATCACAGCTCTAATCTTTAACAAGATC-CAACCGCAGGTACAGAAATAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47078952 684 + 50890351 ATTGCAATCCCGTGTCTTTCCTT------CCA-------ATCGAATCCAATCTCAAGGACCCCAGTTCCTGAGCAGCCCTGGCTTGGCTCAGCCAAAGGGAAGTGTCCAGAGCATCTGAGTCTCGACTGCCCGGAGGTCTGCACTTCTTGCCGTTTTCAGGAGATTCAACTGCAAAGCCCTCCCCAGGTCATCCACATTGGCTCCCGTGTCTGTGCCCCACCCTTCCTGCCTGGGAGAAGCC-TCTTGTTCAGCC-GAAAAAG--CAACCTGAGGGTGAGGTGGTAGGAGGGACTCACCCATGTCTTTCGCCATCTTCGGGCCCGGAGG--------------GAGTCCTGGAAGGAAGACCTC-AGACGATGGT-CATCTCCATAGGATTCC---CACCCTGC-CCCTGGCTTTGTCCTGAATATTAGCCTTGGCGGCCTGGCCTGGGTTCCGATGGTGGATGAACCTGGCTTTCCACGGGCTCCCACCTCCAGCCTGCGCTGTGGAGACACCAGGTCCTCGGAACCGTATTTTAACTTTGTCCTCCCTTCCCTGCCGGGGTTTACGAAGACGTAGCGGGTGTCGTAGATGTGAAAATGCTTCTGCTATACCAGAGTCAGGAACTGAGCAAAACTGAAAAATGCACAGGATGTGGTCTCCCAGGTGCTAGCATCGTAGCTCAAATCTTTAACAAGGTC-CAACCGCGGGCACGGAAATAAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19769245 637 - 122678785 AGTATGGCTCTGGGTCTCTCCCTTGTTACCCAAGGGAGTACCTGATTAGATCTCAAAGACCCATATTTCTGAGCATCAGGGGTCTG-------CAGA-----------ACAGAATCTGAGCCTAGCAGGCCCAAACGTCTCTGATTCCTGCTGTTTCCAGGAGACTGAACTGCAAAGTCCTCCCCAAGGCATCTGCATTAGCCCACACCTGTGTGCTCCATGACTTCTGCC------------TC---TTCAGAA-AAAAAAAATCAACCTAGGGGTAGGG-------ACTGACTAACCCACTTGGGTCCAGATCCTCTGGCCTTGTTGGAAGGAAGGCTCGTGAACAATGCAAGGAAGGCTCATGAATGATGATCCACTTCCACACAAATCCGAGCTCCCAGTAACTTGGTGTTATCCTGGCTCTGAGTCTGAGCAGGCTGGCCAGGAT----ATTGTCAGTGGACCCCACTTCCCACAGGCTCCCACC-----------CTTTGG---GACAGGATATTC-------CAGTATGACCCTTTCCTCCTGTCCCTTCCAGGACTTACGGAAAT-CAACGTGAG-----GATGTGAAAATGCTTCTGT------AGGATCTG-----GGGCACAGCTGAAAAATGTGCAGGATGTGGTGTGGGAGGCACCAACACCACCATTTAGATAGTCTGCGAGCTAGCAAT--CATCCATAAAAATGAA i canFam3.chr1 C 0 C 0 e calJac3.chr22 3406315 35 - 49145316 I a score=416711.000000 s hg38.chr19_GL949753v2_alt 352626 233 + 796479 CAGCTTCT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCCCAAACGTTACTTTTTTTTT-------------TTTATTTTGCTTGAGAGCCAAGGCAATATTAGACAAGCCTTAC-TCCCTAATTAGTGCCTGACAAGAACCATATCTCTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTTACCAAATGTAAAACTCATGTCAAAgcc s panTro4.chr19 59297439 246 + 63644993 CAGCTTCT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAAGATGGGGCTGAGGAAGCAACACAGATTCCCAAATGTTACtttttttttcctttttttttttttttttttGCATGAGAGCCAAGGCAATATTAGACAAGCCTTAC-TCCGTAATTAGTGCCTGACAAGAACCATATCTCTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTCACCAAATGTAAAACTCATGTCAAAgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56182776 228 + 60714840 CAGCTTTT-CCCTGCCCTGTATACGTCTCCGATTTTACCCAGGGTGGGGCTGAGGAAGCAACTCAAATTCCCAAATATTACTTTTTTTTT------------------TTTGCATGACAGCCGAGGCAATATTAGACAAGCCTTAC-TCCCTAATTAGTGCCTGACAAGAACCACATCTGTGTCCCAATCCTTCTATTCAAAGTAGGCACAATTTGCTTTTACCAAATGTGAAACCCATGTCAAAgcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60183587 230 + 64156825 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCCAAGGCAATATGAGGCAAGGCTTGC-TCCCTAGTTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCTATTCAAAGTAGGCGCAATTTGCTTTTACCAAATGTAAAACTCACGTCAAAAcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55283905 230 + 59248254 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAGATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCCAAGGCAATAGGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCCATTCAAAGGAGGCGCAATTTGCTTTTACCAAATGTAAAACTCACGTCAAAAcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47382265 229 + 51301725 CAGCTTCT-CCCTGCCCTGTACACGTCTCCAATTTTACCCAGGATGGGGCTGAGGAAGCAACACAAATtcacaaattttac-tttttttt----------------ttcttgcatgagAGCCAAGGCAATATGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCCATTCAAAGGAGGCGCAATTTGCTTTTACCAAATGTAAAACTCATGTCAAAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47079636 230 + 50890351 CAGCTTCT-CCCTGCCCTGTATACATCTCCAATTTTACCGAGGTTGGGGCTGAGGAAGCAACACAAATTCACAAATTTTACTTTTTTTTT----------------TTCTTGCATGAGAGCTAAGGCAATATGAGGCAAGGCTTGC-TCCCTAATTAGTGCCTGACAGGAACCGTATCTCCGTCCCAATCCTTCTATTCAAAGTAGGTGCAATTTGGTTTTACCAAACGTGAAACTCATGTCAAAgcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19769882 211 - 122678785 TGGTTTTTGTTCTGCTCTGGGGGGCTCTCTGATATTCCCCAGGTT-GGGCTAAGAAGAGAACTTAGTTTTCTGGATA----------GTT----------------TCTTCACAGGAGACCCAGGGCTGTATCAGGTAA--CCTGCACCCCTGGTTAGTACA-GACATGAGCTCCATCTCTATCCAAG--CTTCATGTCAAAGAGATTGCAATTTGTTGTCACCAAAC-----ACTTATGTTAAAACC i canFam3.chr1 C 0 I 10665 e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=437533.000000 s hg38.chr19_GL949753v2_alt 352859 265 + 796479 atgctgtgagtatttacaccagagaaatcggcaaatgctacacgtcggggttgttttttgtttttctttttgc-tttttttttcagagagctgattgtcaagactttaccagcacactgctgGTAAATTTCCAAAGGCCAATTTAAAGAA----ATTTTTTTAACAGAACATGTAAAAAAAAA--TCAACGTGAAGTCAACATGCTCCAGGGAAATCAGACAATTGATAAAGCATGTCTATTTCTGTAGTGTATACTCCAGCCTGTTTCCCC s panTro4.chr19 59297685 266 + 63644993 atgctgtgagtatttacaccagagaaatcggcaaatgctacacgtcggggttgttttctgtttttctttttgc-tttttttttcagagagctgattgtcaagcctttaccagcacactgctgGTAAACTTCCAAAGGCCAATTTAAAGAA----ATTTTTT-AACAGAACATGTAAAAAAAAAAATCAACATGAAGTCAACATGCTCCAGGGAAATCAGACAATTGATAAAGCATGTCTATTTCTGTAGTGTATACTCCAGCCTGATTCCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183004 267 + 60714840 atgctgtgagtatttacaccagaaaaattggcaaatgctacacgtcagggttgttttttgtttttctttttgcttttttttttcagagagctgattgtcaagcctttaccagcacactgctgGTAAATTTCCAAAGGCCAATTTAAAGAA----ATTTTTT-AACAGAACATGTAAAAAAAAAAATCAACGTGAGGTCAACATGCTCCAGGAAAATCAGACAATTGATAAAGAATGTCTATTTCTGTAGTGTATACTCCATCCTCTTTGCCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60183817 266 + 64156825 gtggtgtgagtatttacaccagagaaatcggcaaacgctacacgtcagggttgttttttgtttttccttttgc-ttttttttacagagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCAATTTAAAGAA-AAATTTTTTT-TACAGAACACATAAAAAAAA---TCAATGTGAAGTCAACATGCTCCAGGAAAATCAGAGAATTGATAAAGCATGACTATTTCTGTAGCACATACTCCACCCTGTTTCCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55284135 267 + 59248254 gtggtgtgagtatttacaccagagaaatcggcaaacgctacacgtcagggttgttttttgtgtttccttttgc-tttttttttcaaagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCCATTTAAAGACTTTTTTTTTTT-TGCAGAACACGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCACGACTATTTCTGTAGCACATACTCCACCCTGTTTCCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47382494 265 + 51301725 GTGGTGTGAGTATTTACACCAGAGAAATCGGCAAACGCTACACGTCAgggttgttttctgtgtttccttttgc-ttcttttttcaaaGAGCTGATGGTCAAGcctttaccagcacaccactggtaAATTTCCAAGGGcccatttaaagaa--atttttttt-tgcagaacaTGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCATGACTATTTCTGTAGTGTATACTCCACCCTGTTTCCCC i papAnu2.chr19 C 0 M 1175 s chlSab2.chr6 47079866 266 + 50890351 gtggtgtgagtatttacaccagagaaatcggcaaatgctacgcgtcagggttgttttctgtttttccttttgc-tttttttttcagagagctgatggtcaagcctttaccagcacaccactgGTAAATTTCCAAGGGCCCATTTAAAGAA-AATTTTTTTT-TACAGAACACGTAAAAAACA---TCAACGTGAAGTCAACATGCTCCAGGAAAACCAGAGAATTGATAAAGCATGACTATTTCTGTAGTGTATACTCCACCCTGTTTCCCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=182518.000000 s hg38.chr19_GL949753v2_alt 353124 104 + 796479 CTCCTACCTCAGGTACCGTAACCAGCATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTACCTATTTGGTGTG s panTro4.chr19 59297951 104 + 63644993 CTCCTACCTCAGCTACCGTAACCAACATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATTGATGTACCTATTTGGTGtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183271 104 + 60714840 CTTCTACCTCAGCTACCGTAACCAGCATCTGAAGTCTTATATTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTACCTATCTGGtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60184083 104 + 64156825 CTCCTACCTCAGCTACCATAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGTACATTTGTATATATAGTGTTCTCTCATCGATGTGTCTATTTGGtgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55284402 104 + 59248254 CTCCTACCTCAGCTACCATAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCGTGCACTTTTGTAAATATAGTGTTCTCTCATCGATGTGTCTATTTGGTGTG i macFas5.chr19 C 0 I 496 s papAnu2.chr19 3796608 100 - 51301725 CTCCTACCTCAGCTACCGTAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGCACTTTTGTATATACAGTGTTCTCTCATCGATGTATCTATttgg---- i papAnu2.chr19 I 2044 C 0 s chlSab2.chr6 47080132 104 + 50890351 CTCCTACCTCAGCTACCGTAATCAGCATCTGAAGTCTTATGTTCAAATTTCCCTTGCACTTTTGTAAATATAGTGTTCTCTCATCAATGTACCTATTTGGTGTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I a score=5993.000000 s hg38.chr19_GL949753v2_alt 353228 5 + 796479 tatgt s panTro4.chr19 59298055 5 + 63644993 tatgt i panTro4.chr19 C 0 I 26 s ponAbe2.chr19 56183375 5 + 60714840 tatgt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60184187 5 + 64156825 tgtgt i rheMac3.chr19 C 0 I 269 s macFas5.chr19 55285002 5 + 59248254 tatgt i macFas5.chr19 I 496 C 0 s chlSab2.chr6 47080236 5 + 50890351 TGTGT i chlSab2.chr6 C 0 I 371 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e papAnu2.chr19 3796708 0 - 51301725 C a score=8251.000000 s hg38.chr19_GL949753v2_alt 353233 22 + 796479 atatgtgtgtgtatatata--------------------------------------tat s panTro4.chr19 59298086 60 + 63644993 atatgtgtgtgtatatatacatatatatgtatatgtgtgtctgtgtgtatatatatatat i panTro4.chr19 I 26 C 0 s ponAbe2.chr19 56183380 22 + 60714840 gtgtgtatatatacatata--------------------------------------tat i ponAbe2.chr19 C 0 I 5 s macFas5.chr19 55285007 22 + 59248254 gtgtgtgtgcatgtatata--------------------------------------tat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796708 21 - 51301725 -catgtgtgtgtatatata--------------------------------------tgt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e chlSab2.chr6 47080241 371 + 50890351 I e rheMac3.chr19 60184192 269 + 64156825 I a score=10028.000000 s hg38.chr19_GL949753v2_alt 353255 40 + 796479 atgctatca--tttaaaaat----------------------tgtatttatttatttaAGGTGG s panTro4.chr19 59298146 40 + 63644993 atGCTATCA--TTTAAAAAT----------------------TGTGTTTATTTATTTAAGATGG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55285029 36 + 59248254 atGCTGTCG--TTTAAAAtt--------------------------tttatttatttaagatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796729 64 - 51301725 aggctgccatctttaaaatttatttatttatttattcattcatttattcatttatttgagacag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3922042 8033 + 106955855 I e chlSab2.chr6 47080241 371 + 50890351 I e rheMac3.chr19 60184192 269 + 64156825 I a score=1500.000000 s hg38.chr19_GL949753v2_alt 353295 1 + 796479 g s panTro4.chr19 59298186 1 + 63644993 g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3930075 1 + 106955855 g i nomLeu3.chr10 I 8033 C 0 s macFas5.chr19 55285065 1 + 59248254 g i macFas5.chr19 C 0 I 10 s papAnu2.chr19 3796793 1 - 51301725 g i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47080612 1 + 50890351 g i chlSab2.chr6 I 371 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60184192 269 + 64156825 I a score=208450.000000 s hg38.chr19_GL949753v2_alt 353296 134 + 796479 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccttctgagtagctgggattataagggtgtgaccccatacccagctaatttt s panTro4.chr19 59298187 134 + 63644993 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccttctgagtagctgggattataagggtgtgaccccatacccagctaatttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3930076 134 + 106955855 tcacccaggctagagggcagtggcaccatctcggctcactgcaacctctgcctccagagttcaagtgattctcctgcttcagcctcctgagtagctgggataacaggcacgtgctaccacgcccagataatttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184461 133 + 64156825 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccgggctccagcgatcctccagcctcagccatccgagtagctgggattacaggcacgtgacccca-acccagctaattgt i rheMac3.chr19 I 269 C 0 s macFas5.chr19 55285076 134 + 59248254 tcaccgaggctggagtgcaatggtgcaatctcagctcactgcagcctccacttcccaggctccagcgatcctcctgcctcagccatccgagtagctgggattacaggcacgtgaccccacacccagctaattgt i macFas5.chr19 I 10 C 0 s papAnu2.chr19 3796805 134 - 51301725 tcacccaggctggagtgcagtagcacaatctcagctcactgcagcctccacttcccgggctccagagatcctcccacctcagcctcctgagtagctgggaccacaagcacgtgccaccacactccacagatttt i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47080613 134 + 50890351 tcaccgaggctggagtgcaatggcacaatctcagctcactgcagcctccacttcccaggctccagtggtcctcctgcctcagccatccgggtagctgggattacaggcgcgtgaccccacacccagctaattgt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e ponAbe2.chr19 56183402 5 + 60714840 I e calJac3.chr22 3406315 35 - 49145316 I a score=231172.000000 s hg38.chr19_GL949753v2_alt 353430 115 + 796479 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctggaattacaggcatgagc s panTro4.chr19 59298321 115 + 63644993 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctggaattacaggcatgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183407 114 + 60714840 tg-----------tgtgtttagtagagatagggtttcgccatgttaaccaagct-gtcttgaactcctgccctcaggtgatctgcccgcctcagcctcccaaagtgctgagattataggcatgagc i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 3930210 109 + 106955855 tg-----------tatttctagcagagat-gggttttgccatgttggccaggctggtctcgaactcctgacctcaggtgcttcatctgccttggcctcccaaagtgctgggattacaggcg----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184594 115 + 64156825 tg-----------tatgtttagtagagatggggtttcgctatgttgaccaggctggtcttgaactcctgccctcaggtgatctgctcgcctcagcctcccaaagtgctgggattacaggcatgagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285210 115 + 59248254 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgccctcaggtgatctgctcgcctcagcctcccaaagtgctgggattacaggcatgagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3796939 123 - 51301725 tgatttgttttattttgtttgatagagatggggttttttcttgttgcccaggctggtctcaaactcctgagttcaag---ctcacccacctcgtcctcccaaagtgctaggattataggtgtgagc i papAnu2.chr19 C 0 I 816 s chlSab2.chr6 47080747 115 + 50890351 tg-----------tatgtttagtagagatggggtttcgccatgttgaccaggctggtcttgaactgctgccctcaggtgatctccccgcctcagcctcccaaagtgctgagattacaggcatgagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=358357.000000 s hg38.chr19_GL949753v2_alt 353545 204 + 796479 tactgtgcccagccTCGTTTTTAATTTTAGTGcaaagtatagttttcaaaacaatgtttgcaatgtcatcaaatatagaatgagcacgcatcaatgtcttcttaattcattaatgatgaaatcaTcattcaaaattcctgtctttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca s panTro4.chr19 59298436 204 + 63644993 tactgtgcccagccTCTTTTTTAATTTTAGTGcaaagtatagttttcaaaacactgtttgcaatgtcatcaaatacagaatgagcacgcatcaatgttttcttaattcattaatgatgaaatcaTCATTCAAAATCCCTATCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183521 204 + 60714840 cactgtgcccagccTCTTTTTTAATTTTAGTGcaaagtatagttttcaaaacaatgtttgcaatgtcatcaaatatagaatgagcatgcatcaatgttttcttaattcattaatgatgaaatcattaTTCAAAATCCCTATCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930319 191 + 106955855 -------------CTCAATTTTAATTTTAGTGCAAAGTATAGTTTTCAAAACAATGTTTGCAATGTCATCAAATATAGAATAAGCATGCATCAATGTCTCCTTAATTCATTAATAATGAAATCATcattcaaaattcctatctttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184709 204 + 64156825 cactgtcctcagccTCTTTTTTAATTTTAGTGcaaagtacagttttcaaaacaatgtttgcaatgtcatcaaatgtagaatgagcatgcatcaatgtttccttaattcattcatgatgaaatcaTCATCGAAAATTCCTGTCtttacccaaatatttagctgcttctgttgctcttcatttgttcctgcgtttctccatttcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285325 204 + 59248254 cactgtcctcagccTCTTTTTTAATTTTAGTGCAAAGTACAGTTTTCAAAACAATGTTTGCAATGTCATCAAATACGGAATGAGCATGCATGAATGTTTCCTTAATTCATTCATGATGAAATCATCATTGAAAATTCCTGTCtttacccaaatatttagcttcttctgttgcttttcatttgttcctgcgtttctccatttcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47080862 204 + 50890351 cactgTCCTCAGACTCTTTTTTAATTTTAGTGCAAAGTACAGTTTTCAAAACAATGTTTGCAATGTCATCAAATACGGAATGAGCATGCATGAATGTTTCCTTAATTCATTCATGATGAAATCATCATTGAAAATTCCTGTCtttacccaaatatttagcttcttctgttgctcttcatttgttcctgcgtttctccatttcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e papAnu2.chr19 3797062 816 - 51301725 I a score=727778.000000 s hg38.chr19_GL949753v2_alt 353749 321 + 796479 ctgggatgatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaactttacactctttctatagttttgccttttccagaatgtcacatagttggaatcagacagtggatacgccatttgggcgggcttatttcgtgtagtgatatacattgaactctcctccacatcttttcatgacttgagagcttgtgtcttcttagcatgggataatattccattgtctggacacatagttaatccactcacttactgaagggcatcttggttgcttccaagtttgggcgattatgaataaagctactgtaaagatcc-------------atatg s panTro4.chr19 59298640 321 + 63644993 ctgggatgatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttcacactctttctatagttttgcatcttccagaatgtcacatagttggaatcagacagtggatacgccatttgggcgggcttatttcatgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcgtatgtccttagcatgggataatattccattgtctcgacacatagttaatccactcacgtactgaagggcatcttggttgcttccaagtttgggcgattatgaaaaaagctactgtaaggatcc-------------atatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56183725 321 + 60714840 ctgggattatttcttctTGTCCAAGCCTTTTATTctggcaaccaatgaacttttccctctttctatagttttgccttttccagaatgtcacatagttggaatcagccagtggttatgccgtttggatgggcttatttcatgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcatatcttcttagcacggaataatattccattgtctggacacatagttaatgcactcatgtactgaagggcatcttggttgcttccaagtttgggcaattatgaataaagctaccgtaaagatcc-------------atatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930510 334 + 106955855 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgagcttttccctctttctatagcttcgccttttccagactgtcacatagttggaatcagacagtggataccccatttgggcgggcttatttcgtgtagtgatatacattgaactctcctccacgtcttttcatgacttgagagctcgtctcttcttagcacgggataatattccattgtcttgacacatagttaatccattcacttactgaagggcatcttggttgcttccaagtttgggcaattatgaataaagctaccgtaaagatccatgtgcgtgttttatgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60184913 321 + 64156825 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttttcactctttctatagttttaccttttctagagtgtcacatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatatacatttaactctcttccacgtcttttcatgacttgagagctcatatcttcttcgcacggggtaatattccattgtctggacacacagttaatccactcactcactgcagagcatctcggttgcttccaagtttgggcagttatgaataaagttaccgtaaagatcc-------------atatg i rheMac3.chr19 C 0 I 29 s macFas5.chr19 55285529 321 + 59248254 ctgggattatttcctcttgtcCAAGCCTTTTATTctggcaaccaatgaacttttcactctttctatagttttaccttttctagagtgtcacatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatatacatttaactctcttccacgtcttttcatgacttgagagctcatatcttcttcgcacggggtaatattccattgtctggacacacagttaatccactcactcactgcagagcatctcggttgcttccaagtttgggcaattatgaataaagttaccgtaaagatcc-------------atatg i macFas5.chr19 C 0 I 13 s papAnu2.chr19 3797878 321 - 51301725 ctggGATTATTTCCTCTTGTCCAAGCCTTTTATTCTGGCAACCAATGAACTTTTCACTCTTTCTATTGTTTTGCCTTctccagaatgtcacatagttgGAATCAGACAGTGAATTCCCTATCTGGGCTGACTTCTTTCATGTAATGATATACATTTAGCTCTCCTCCACGTCTTTTCATGACTTGAGAGCTCATATCTTCTTCGCAcgggataatattccattgtctggacaCACAGTTAATCCACTCACTTACTGCAGGGcatcttgattgcttccaagtttgggcaGTTATGAATACAGCTACCGTAAAGATCC-------------ACATG i papAnu2.chr19 I 816 I 13 s chlSab2.chr6 47081066 318 + 50890351 ctaggatgatttcctcttgtcCAAGCCTTTTATTctggcaaacaatgaacttttcactctttctatagttttgccttttccagaatgtctcatagttggaatcagacagtggatcccctatctgggctgacttctttcatgtaatgatgtacatttagctc---tccacgtcttttcatgacttgagagctcatatcttcttagcatgggataatattccattgtctggacacatagttaatccactcacttactgcagggcatcttggttgcttccaagtttgggcaattatgaataaagttaccgtaaagatcc-------------atatg i chlSab2.chr6 C 0 I 13 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=61937.000000 s hg38.chr19_GL949753v2_alt 354070 39 + 796479 accgtatgttttcagctcccttcggtaaatatcaaggaa s panTro4.chr19 59298961 39 + 63644993 accgtatgttttcagctcccttcggtaaataccaaggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184046 39 + 60714840 accatatgttttcagctctcttgggtaaataccaaggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930844 39 + 106955855 accatacgttttcagctcccttgagtaaataccaaggaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55285863 39 + 59248254 accgtacgttttcagttccctcgggtaaataccaaggaa i macFas5.chr19 I 13 C 0 s papAnu2.chr19 3798212 39 - 51301725 AACATATGTTTCAAACTTCCTCGGGCAAATACCAAGGAA i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47081397 39 + 50890351 accatacgttttcagttcccttgggtaaataccaaggaa i chlSab2.chr6 I 13 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60185234 29 + 64156825 I a score=207646.000000 s hg38.chr19_GL949753v2_alt 354109 90 + 796479 tgcaattgctggattacatggcaaagctatatttagttttagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc s panTro4.chr19 59299000 90 + 63644993 tgcaattgctggattacatggcaaagctaaatttagtttgagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184085 90 + 60714840 tgcaattgctggattacgtggcaaagctatatttagttttagaagaaattgccgcactgtctcccaaagtggctgtaccatttggcaatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930883 90 + 106955855 tgcaattgctggattacatggtaaagctatatttagtttcataacacattgccgcactgtctcccaaagtggctgtaccatttcgcaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60185263 90 + 64156825 tctaattgctggattctatggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccatttcgcaatc i rheMac3.chr19 I 29 C 0 s macFas5.chr19 55285902 90 + 59248254 tgtaattgctggattatacggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccatttcgcaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3798251 90 - 51301725 TGTAATTGCTGGATTACATGGTAAAGCTATATTTAGTTTTAgaagaaattgccacactgtctcccaAAGTGGCTGGACCATTTCGcaatc i papAnu2.chr19 C 0 I 591 s chlSab2.chr6 47081436 90 + 50890351 cgtaattgctggattatatggtaaggctatatttagttttagaagaaattgccacactgtctcccaaagtggctggaccattttgcaatc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=1266757.000000 s hg38.chr19_GL949753v2_alt 354199 609 + 796479 ccaccagcaatgaatgagagttcccgttgctccacatcctcgccagtaggccagtatgtggtattgtctgcgttttagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGATAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGAACTTTGACAAGCCACTTCCCCTATAAACTTGTCtttctttct------ttctttt--tttttttttttttgagatgaagtctcactctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcccgggttcaagtgattct-------------------------------------------------catgcctcagcctcgtgagtaactgggattacaggcatgcaccaccacacccagataattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctc--gtgatctgcccacctcagccttttaaagtgctgggattataggtgtaagccactgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAAAAGTCGATCAAC s panTro4.chr19 59299090 604 + 63644993 ccaccagcaatgaatgagagttgctgttgctccacaacctggccagtaggccagtatgtggtgttgtctgcgttttagaatttggccactctaataggtgtgccgtggtaactTGGTTCCTAAGATACTGAGAGAGGTACAGAACACCAGCTGGGAAATCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGACCTCGGACAAGCCACTTCCCCTATAAACttatcttttttt-----------tttt--tttttttttttttgagatggtgtctcactctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcccgggttcaagtgattct-------------------------------------------------catgcctcagcctcgcgagtaactgggattacaggcatgcgccaccacacccagataattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctt--gtgatctgcccacctcagccttttaaagtgctgggattataggtataagccactgagcccggcc----TCCTTATAAACGTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAAAAGTCGATCAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184175 617 + 60714840 ccaccagcaatgaatgagagttcctgttgctccacatcctcgccagtatgccagtatgtggtattgtctgcgttttagaatttggccactctaataggtgtgtcgtggtaATTTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAATCAGCCAGAATGCGCTTCTCCTGTGACTTCCTGTTCCACAGCCTCAGAGACCTCGGACAAGCCACTTCCCCTATAAACTTATCTTTTTTCtttctttcttttttt--tttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctccgcctcctgggttcaagtgattct-------------------------------------------------cctgcctcagcctcgcgagtaactgggattacaggcatgcgccaccacatccagctaattttgtatttttagtacagacggggtttcaccatgctgaccaggctggtctcggactcctgacctc--gtgatctgcccacctcagccttttaaagtactgggattataggtgtgagccaccgagtccggcc--CTTTTTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTAGAAGTCGATCAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3930973 607 + 106955855 ccagcagcaatgaatgagcgttcctgttgctccacatcctcgccagtaggccagtatgtggtattgtctgtgctttagaatttggccactctgataggtgtgtcgtgg----tTGGTTCCTAAGATACTGAGAGAGTTGTGGAACACCAGCTGGGAAATCAGCCAGAATGAGCTTCTCCTGTGACTTCCTGTCCCACAGCCTCAGAGACCTCAGACAAGCCACTTCCCCTATAAACCTATCtttcctt----------ttttt--tttttttttttttgagatggagtctggctctgtcacccaggctggagtgcaatggcatgatcttggctcactgcaacctctgcctcccaggttcaagtgattcc-------------------------------------------------catgcctcagcctcctgagtagctgggattacaggcacgtgccaccccacccagctaattttgtattttcagtagagacggggtttccccacgtcagccagtatagtctggaatccctgacctcaggtgatccgcccgcctcaacctcccaaagtgctaggatgacaggcgtgagccaccacacttggcTACTTCCCTTATAAACTTTTCTAAATATAAATGTGTGAATATTCTTTCTTCAGAAGCCGAtcaac i nomLeu3.chr10 C 0 I 509 s rheMac3.chr19 60185353 607 + 64156825 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtgtgccagtatgtggtatcatctgcatttcagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGAAGTCCTGTCCCACAGCCTCAGTGTCCTCAGACAAGCCACTTCCCCTTTCCTTCTTCTTtttttttt------tttcttttctttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgc---------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------acaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gacctc--atgatttggttgcctcagcctttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGATCAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55285992 607 + 59248254 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtatgccagtatgtggtatcatctgcatttcagaatttggccactctaataggtgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCCACAGCCTCAGTGTCCTCAGACAAGCCACTTCCCCtttccttcttctttttttttt------tttcttt--tttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtagctgggattacaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gacctc--atgatttggctgcctcagcctttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGATCAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47383934 606 + 51301725 ccaccagcaatgaatgagagttcctgttgctccacgtcctctccagtaTGCCAGTATGTGGTATCATCTGCGTTTCAGAATTTGGCCACTCTAATAGGTGTGTCGTGGTAACTTGGTTCCTAAGATACTGAGAGAGGTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCcacagcctcagtgtcctcagaCAAGCCActtcccctttccttcttc-ttttttttt------tttcttt--tttttttttttttgagatggaatctcactctgtaacccaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtagctgggattacaggcatgcaccaccatgcccggctaattttgtatttttagtagagatgggttttcaccatgttgaccaggctggtcttgaactc--gaccTC--ATGATTTGGCTGCCTCagcttttcaaagtgctgggattacaggtgtgagccaccgagcccggcc----tccTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTGAtcaac i papAnu2.chr19 M 1175 C 0 s chlSab2.chr6 47081526 598 + 50890351 ccaccagcaatgaatgagaattcctgttgctccatgtcctctccagtatgccagtatgtggtatcgtctgtgtttcagaatttggccactgtaataggcgtgtcgtggtaactTGGTTCCTAAGATACTGAGAGAGCTGCAGAACACCAGCTGGGAAGTCAGCCAGAATGAGCTTCTCCTGTGACGTCCTGTCCCACAGCCTCAGTGACCTCAGACAAGCCGCTTCCCCTTTTCttcttcttcttttttt------ttttttt--tttttt---------gatggagtcttactctgtcacgcaggctgaagtgcaatggcatgatctcggctcactgcagcctctgcctcccaggttcaagtgattct-------------------------------------------------cctgcctcagtcttgcaagtaactaggattacaggcatgcaccaccacgcccggctaattttgtatttttagtagagatgggttttcaccaggttgaccaggctggtctcgaactc--gacctc--atgatttggctgcctcagcctttcaaagtgctgggattacaggtgtgagccactgagcccggcc----TCCTTATAAACTTCTCTAAATCTAAATTTGTGAATATTCTTTCTTTGAAAGTTAATCAAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=387181.000000 s hg38.chr19_GL949753v2_alt 354808 220 + 796479 Tggcctggcacagtggctcatgcctgtaataccagcattttggaaggtcgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacctggtgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcgggcgcctgtaatcccagctgcttgggaggctgagaggcaggagaattgcttgaacccaggaggtagag s panTro4.chr19 59299694 220 + 63644993 Tggcctggcacagtggctcacgcctgtaataccagcactttggaaggtcgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacctggtgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcgggcgcctgtaatcccagctgcttgggaggctgagaggcaggagaattgcttgaacccaggaggtagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56184792 217 + 60714840 Tggcctggcacagtggctcacgcctgtaataccagcattttggaaggccgaggcggatggatcacttgaggtcaggagttcgagtccagcctggccaacatggtaaaaccccatctctactaaaaatacaaaactagaggggcatagt--ggcgggcgcctgtaatccca---gcttgggaggctgagaggcagcagaattgcttgaacccgggaggtagag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60185960 220 + 64156825 Tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i rheMac3.chr19 C 0 I 63 s macFas5.chr19 55286599 220 + 59248254 Tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47384540 222 + 51301725 tggccaggcgcagtggctcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaattagagagGCATAgtggggcaggcgcctgtaatcccagctgctccggaggctgagaggcaagagaattgcttgaacctgggaggcagag i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47082124 218 + 50890351 TTGTAATACCAAGTA--tcacgcttgtaataccagcattttggaaggccgaggtggatggatcacttgaggtcaggtgttcgagacaagcctggccaacatgatgaaaccccatctctactaaaaatataaaattagaggggcatagt--ggcaggcgcctgtaatcccagctgctcctgaggctgagaggcaggagaattgcttgaacctgggaggcagag i chlSab2.chr6 C 0 I 63 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I a score=7979.000000 s hg38.chr19_GL949753v2_alt 355028 11 + 796479 gttgcagtgag s panTro4.chr19 59299914 11 + 63644993 gttgcagtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185009 11 + 60714840 gttgcagtgag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55286823 11 + 59248254 GTGGCACTGAG i macFas5.chr19 I 4 I 24 s papAnu2.chr19 47384766 11 + 51301725 gtGGCACTGAG i papAnu2.chr19 I 4 I 24 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e rheMac3.chr19 60186180 63 + 64156825 I a score=12185.000000 s hg38.chr19_GL949753v2_alt 355039 48 + 796479 ccgaaatcgcaccactgcactccagcctgggcaacagaagcgaaactc s panTro4.chr19 59299925 48 + 63644993 ccgaaatcgcaccactgcactccagcctgggcaacaggagcgaaactc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185020 48 + 60714840 ctgagatcttgccactgcactccagcctgggcaacaggagcgaaactc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e papAnu2.chr19 47384777 24 + 51301725 I e macFas5.chr19 55286834 24 + 59248254 I e rheMac3.chr19 60186180 63 + 64156825 I a score=10207.000000 s hg38.chr19_GL949753v2_alt 355087 36 + 796479 tgtcctaaaaaaacaaaaTTAAATTAAAAAGCCAGT s panTro4.chr19 59299973 36 + 63644993 tgtcctaaaaaaaTTAAATTAAATTAAAAAGCCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185068 36 + 60714840 tgtcctaaaaaaTTTAAATTAAGTTAAAAAGCCAGT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55286858 24 + 59248254 TGCTCTAAAGAAAA-----------AAATATCCgg- i macFas5.chr19 I 24 C 0 s papAnu2.chr19 47384801 24 + 51301725 tgctctaaagaaaa-----------aaatatccgg- i papAnu2.chr19 I 24 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082342 63 + 50890351 I e rheMac3.chr19 60186180 63 + 64156825 I a score=120492.000000 s hg38.chr19_GL949753v2_alt 355123 68 + 796479 cctggtgtggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtc s panTro4.chr19 59300009 68 + 63644993 cctggtgtggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185104 68 + 60714840 ccgggcttggtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcagatcacgaggtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60186243 68 + 64156825 ctgggtgcagtggctcatgcctataatcccagcactttgggaggccaaggcaggcagatcacaaggtc i rheMac3.chr19 I 63 C 0 s macFas5.chr19 55286882 68 + 59248254 ctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47384825 68 + 51301725 ctgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47082405 68 + 50890351 ctgggcgcagtggctcatgcctgtaatcccaacactgtgggaggccaaggcaggcagatcacaaggtc i chlSab2.chr6 I 63 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I a score=165302.000000 s hg38.chr19_GL949753v2_alt 355191 217 + 796479 aggtgatcgagaccatcctggccaacacggtgaaaccccatctctactaaaaaaa---tacaaaaagttagctgggcgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggaaaatggcatgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagccagggtgacagagcgagactccgtctcaaaa s panTro4.chr19 59300077 220 + 63644993 aggagatcgagaccatcctggctaacacggtgaaaccccatatctactaaaaaaaaaatacaaaaagttagctgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggaaaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagcgagactccgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185172 217 + 60714840 aggagatcgagaccatcctggccaacacggtgaaactccgtctctactgaaaaaa---tacaaaaagttagctgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgaggcagaaaaatggcataaaccctggaggcggagcttgcaatgagccgagatcacgccactgcactctggcctgagtgacagagcgagactccgtctcaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60186311 213 + 64156825 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaa-----tac-aaaagttagctgggcgtggtggcgggcacttgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgcaccccagcctggg-gacagagtgagactctgtctcaaaa i rheMac3.chr19 C 0 I 37 s chlSab2.chr6 47082473 212 + 50890351 aagagatggagaccatcctggccaacatggtgaaaccccatctctactaaaaa-----tac-aaaagttagctgggcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccgagatcgcaccactgcgctgcagcctggg-gacagagcgagactctgtctcaaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C a score=8025.000000 s hg38.chr19_GL949753v2_alt 355408 17 + 796479 ataaataaataaataaa s panTro4.chr19 59300297 17 + 63644993 ataaataaataaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185389 17 + 60714840 ataaataaataaattaa i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47082685 17 + 50890351 ataaataaaTACATAAA i chlSab2.chr6 C 0 I 7 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=2948.000000 s hg38.chr19_GL949753v2_alt 355425 16 + 796479 at-----aaaTAAGTCGATAG s panTro4.chr19 59300314 16 + 63644993 at-----aaataaGTCGATAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185406 21 + 60714840 ataaataaaATAAGTCGAttg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e papAnu2.chr19 47384893 0 + 51301725 C e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=77081.000000 s hg38.chr19_GL949753v2_alt 355441 166 + 796479 accaatatttatcaattacctcttatacgcttggtgtttgagattcaggaatgaacaaaacagatccagtccctgccctcaacctagctcttagtgtaatgattatgggaacagggtcaaatagcaaatcacaaATTATTTCACGACTATTGTGAGACAAGAGTGA s panTro4.chr19 59300330 166 + 63644993 accaatatttatcaattacctcttatacacttggtgtttgagattcaggaatgaacaaaacagatccagtccctgccctcgaccgagctcttagtctaatgattatgggaacagggtcaaatagcaaatcacaaattatttcatgaCTATTGTGAGACAAGAGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185427 166 + 60714840 actaatatttatgaattacctcttatatgcttggtgtttgagattcaggagtgaacaaaacagatccagtccctgccctcaacagacctcttagtctaatgattatgggaacagggtcaaatagcaagtcacaaATTATTTCACGACTATTGTGAGATAAGAGTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3798932 166 - 51301725 ACCAATATTTATCAATTGCTTATTATCTGCTTGATGTTTGAGATTCAGGAGTGAACAAAACATATCCAGCCGCTGCCATCAACAGAGCTCTGAGTCTAATGATGATAGGGACAGGATCAAAGAGCAAATCACAAATTATTTAGCTACTATTGTGAGATAAGAGTTA i papAnu2.chr19 I 591 I 174 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=5322.000000 s hg38.chr19_GL949753v2_alt 355607 11 + 796479 Gagccaagagt s panTro4.chr19 59300496 11 + 63644993 Gagccaagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185593 11 + 60714840 Gagccaagagt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 3799272 11 - 51301725 gagccaggtgt i papAnu2.chr19 I 174 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e macFas5.chr19 55286950 0 + 59248254 C e rheMac3.chr19 60186524 37 + 64156825 I a score=41907.000000 s hg38.chr19_GL949753v2_alt 355618 65 + 796479 ggtggtgcacacctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcagtgagccgagatcgc s panTro4.chr19 59300507 65 + 63644993 ggtggtgcacgcctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcggtgagccgagatcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185604 65 + 60714840 ggtggtgcatgcctgtaatcccagct-----------------------------cgaaccagggagacagaggttgcggtgagccgagatcgc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3834721 93 - 59248254 ggtggcgggcgcctgcagtcccagctacc-gggaggctgaggcaggagaatggtgtgaacccaggaggcggagtttgcagtgagcccagaccgt i macFas5.chr19 I 8745 C 0 s papAnu2.chr19 3799283 94 - 51301725 ggtggcgggcgcctgtagtcccagctactggggaggctgaggcaggagaatggcgtaaacccgggaggcagaggttgcagtgagctgagatcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e nomLeu3.chr10 3931580 509 + 106955855 I e chlSab2.chr6 47082702 7 + 50890351 I e rheMac3.chr19 60186524 37 + 64156825 I a score=5470.000000 s hg38.chr19_GL949753v2_alt 355683 5 + 796479 accaa s panTro4.chr19 59300572 5 + 63644993 accaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185669 5 + 60714840 accGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932089 5 + 106955855 accaa i nomLeu3.chr10 I 509 C 0 s macFas5.chr19 3834814 5 - 59248254 gccac i macFas5.chr19 C 0 I 60 s papAnu2.chr19 3799377 5 - 51301725 gccac i papAnu2.chr19 C 0 I 57 s chlSab2.chr6 3696106 5 - 50890351 ACCGA i chlSab2.chr6 I 1091 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I e rheMac3.chr19 60186524 37 + 64156825 I a score=343439.000000 s hg38.chr19_GL949753v2_alt 355688 165 + 796479 tggcttaacacaatgggatttggcttttcactcatgtaaatgaccagtgcggttttctctggggcagaatttgaa-ttttctccccaggatgactcagggacacccgcttcctccattgtgctcccatcatgcccttgggcaatggcgtcccgtactTCAAACAGC s panTro4.chr19 59300577 165 + 63644993 tggcttaacacaatgggatctggcttctcactcatgtaaatgaccagtgcggttttctctggggcagaatttgaa-ttttctccccaggatgactcagggacacccgcttcttccattgggctcccatcatgcccttgggcAATGGCATCCCGTACTTCAAACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185674 164 + 60714840 tggcttaacacaatgggatttggcttctcactcatgtaaatgaccagtgcgggtttctct-gggcagaatttgaa-ttttctccccaggatgactcaaggacacccgcttcttccattgtgctcacatcatgcccttgggcaatggcgtcccatactTCAAACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932094 165 + 106955855 tgccttaacacaatgaggtttggcatctcactcatgtaaatgaccagtgagggtttctct-gggcagaatttgagtttttttccccaggatgactcagggacaccggcttcttccattgtgctcacatcatccccttgggcaatggtgtcccatacttcagacaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848452 158 - 64156825 tggcttaacataatgaggtttgtcatctcactcacgtaaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatccccttgggcaatggcgtcccatccttcacacaga i rheMac3.chr19 I 5929 C 0 s macFas5.chr19 3834879 158 - 59248254 tggcttaacataatgaggtttgtcatctcactcacgtaaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatccccttgggcaatggcgtccCATCCTTCACACAGA i macFas5.chr19 I 60 C 0 s papAnu2.chr19 3799439 158 - 51301725 tGGCTTAACACAATGAGGTTTGGCATCTCACTCATGTGAATGACCAGTAAGGGTTTCTCT-GGGCggaatttgaa-ttttatctccAGGATGACTCAGGGACACCCGCTTCTTCCA------TCATATCATCCCCTCGGGCAATGGCGTCCCATCCTTcacacaga i papAnu2.chr19 I 57 C 0 s chlSab2.chr6 3696111 157 - 50890351 tggcttaacacaatgaggtttggcatctcactcatgtgaatgaccaatgagggtttctct-gggcggaatttgaa-ttttatctccaggatgactcagggacacccgcttcttcca------tcatatcatcccctcgggcaatggcgtccCATCCTTCACACAG- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19770093 10665 - 122678785 I e calJac3.chr22 3406315 35 - 49145316 I a score=488204.000000 s hg38.chr19_GL949753v2_alt 355853 208 + 796479 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTGCTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------GTTATGAACAGTCACACAATGATGCAAC-AAGACCAGGGAAAAAGTCCCTTGGTG-GGGGTAGCCACTTCCCAGAGGTTCCAATGCTTGCACTGTAAGGGTAAGTACAGAA-----TTTTTTTTT s panTro4.chr19 59300742 208 + 63644993 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTGCTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------GTTATGAACAGTCACACAATGATGCAAC-AAGACTAGGGAAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGTTTCCAATGCTTGCACTGTAAGGGGAAGTACAGAA-----TTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56185838 212 + 60714840 AAGAAAGAAGGAGAAACAGAATATATCTGTGCACTTGCAAAATTTACTGACACATGTCATTTCTGTCCAGAATTGTTGGCTATAAATAGT-------ATTATGGACAGTGACACATGGATGCAAC-GAGACCAGGAAAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAGTGCTTGTACTGTAATGGGAAGTACAGAA-TTTTTTTTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932259 201 + 106955855 aag-----aggagacacagaaaatatttgtaaatttgcaaaattgactgacgcacatcatttctgtccag-atttttggctataagtagt------cattatggtcagtcacacatgggtgcaaaggagactagaaaaAAAGTCCCTTGGTG-AGGGTAGCCACCTCCCAGAGGTTCCAGTGCTTGCACTGTAA-GGGAAGTACAGAA-------TTCTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848610 206 - 64156825 aag-----aggagacacagaaaatatttgtacacttgcaacgttgattgacgcacatcatttctgtccag-acttttggctataaatagt------cattatggtcagtcacacacggatgcaaaggagactaggagaAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCACGCAGTGTAAGGGGAAGTACAGAA---TTTTTTTGTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835037 206 - 59248254 AAG-----AGGAGACACAGAAAATATTTGTACACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CATTATGGTCAGTCACACACGGATGCAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCACGCACTGTAAGGGGAAGTACAGAA---TTTTTTTGTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3799597 206 - 51301725 aag-----agaagaaacagaaaatatttgtacACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CA-TATGGTCAGTCACACACGGATGTAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCATGCACTGTAAGGGGaagtacagaa--tttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696268 202 - 50890351 -----------AGACACAGAAAATATTTGTACACTTGCAACGTTGATTGACGCACATCATTTCTGTCCAG-ACTTTTGGCTATAAATAGT------CATTATGGTCAGTCACACAC-GATGCAAAGGAGACTAGGAGAAAAGTCCCTTGGTG-GGGGTAGCCACCTCCCAGAGGTTCCAATGCATGCACTGTAAGGGGAAGTACAGAAtttttttttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45602008 210 + 49145316 AAGAAAG-AGGAGAAACAGAAAATATTTGTGCACTTGCAAAATGTACTTAGACATATCATTTCCGTCCAG-ATCTTCGGCTAAAAATAGTCATTATCATTACAATCAGCCACACATGGATGCAAAGGAGACTAGAAAAAATGTCCCTTGGTGTGGGGTAGCCACCTCCCAGAGATTCGAGTGC----AGTGTAAGGGGAAATACAGAA------TGCTTTTT i calJac3.chr22 I 694 C 0 e canFam3.chr1 19770093 10665 - 122678785 I a score=1172334.000000 s hg38.chr19_GL949753v2_alt 356061 406 + 796479 TTTCTGGTGAGCAGCCACATATTTCTGCCTCACGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCCAGGAGCATGATGTTGTGACACCT-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGTACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAGAGAAATATTGTCATATTCCCTCTGGAACCCATGCACGTCTTAGCTAACCTGCAGAGAGGAGTAGAAACC-ACTAGAACTGAAGGAGG-CAGCTCTGTGCAAGGGTGACGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGGTGCAGAACCTGAACCCAGACAACCC s panTro4.chr19 59300950 406 + 63644993 TTTCTGGTGAGCAGCCACATATTTCTGCCTCACGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCCAGGAGCATGATGTTGTGACACCT-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGTACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAAAGAAAAACTGTCATATTCCCTCTGGAACCCATGCACGTCTTAGCTAACCTGCAGGGAGGAGTAGAAACC-ACTAGAACTGAAGGAGG-CAGCTCTGTGCAAGGGTGACGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGGTGCAGAACCTGAACCCAGACAACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186050 406 + 60714840 TTTCTGGTGATCAGCCACACATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAATGTATAGCCAAGGAGCATGATGTTGTGACACCC-GAT-TGATGGACCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCCCTGCACTTAGAAGGAAATCA--AAACCAAAGGTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACACCTTAGCTAACCTGCATGGAGTTGTAGAAACC-ACTAGAACTGAGGGAGG-CAGCTCTGTGCCAGGGTGATGGCCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCAA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCAGGGGTGCAGAACCTGAACCCAGACAACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932460 406 + 106955855 TTTCTGGTGAGCAGCCACACATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAATGTACCTGAGAGTGTATAGCCAACGAGCACGATGTCGTGACACCC-GAT-TGATGGACCATGTT------------------------------------------------------------------------------------GGGTGATTGACTCTCCTGATCTTAGAAGGAAATCA--AAACCAAAGTTTCAAGTAACATCAAAGAGAAACATCTCCATGTTCCTTCTGGAACCCGTGCATGTCTTAGCTAAACTGCAGGGAGAAGTAGAAACT-ACTAGAACTGAGGGAGG-CAGCTGCGTGCAAGGGTGATGGGCTTCTCCCCTCCCAGTTCCCTTAGTTCTGGAGTTCGA---TGAAGGACGGAGTGCACATGGCCCACTCCATTTCCTCTTTCTCTGAACCGGTGGTGCAGAACCTGAACCCAGACAACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3848816 407 - 64156825 TTTCTGGTGAGCAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCCAGAAGAAACATACCTGAGACTGTACAGCCAAGGAGCATGACGTTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAAGGAAACCA--AAACCAAAGTTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAGGGAAG-CAGCTCTGTGCAAGGATGGTGGTCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTCAACCCGGGTAACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835243 407 - 59248254 TTTCTGGTGAGCAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCCAGAAGAAACATACCTGAGACTGTACAGCCAAGGAGCATGACGTTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAAGGAAATCA--AAACCAAAGTTTCAAGTAATATTAAAGAGAAAAATTGTCATATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAAGGAAG-CAGCTCTGTGCAAGGATGGTGGTCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTCAACCCGGGTAACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3799803 407 - 51301725 tttctggtgagcAGCCACATATCTCTGCCTCATGTGAAAAATAATCTCAAGAAGAAACGAACCTGAGACTGTACAGCCAAGGAGCACGATGCTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGACTGACTCCTCTGTACTTAGAaggaaatca--aaaccaaagtttcaagtaatattaaagataaaaattatcatATTCCCTCTGGAACCCATGCACATCTTAACTTACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCGAGGGAAG-CAGCTCTGTGCAAGGGTGGTGGCCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCCGTTTCCTCTTTCTCTGAACCAGGGATGCAGAACCTGAACCCGGGTAACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696470 404 - 50890351 tttCTGGTGAGCAGTCACATATCTCTGCCTTATGTGAAAAATAATCTCAAGAAGAAACGAACCTGAGACTGTACATCCAAGGAGCGCGACGCTGTGACACCCTGAT-TGATGGGCCATGTG------------------------------------------------------------------------------------GGGTGATTGACTCCTCTGTACTTAGAAGGAAATC-----ACCAAAGTTTCAAGTAATATTAAAGATAAAAATTATCATATTCCCTCTGGAACCCATGCACATCTTAGCTAACCTGCAGAGAGCTGTAGAAACC-ACTAGAACCAAACGAAG-CAGCTCTGTGCAAGGGTGGTGGCCTTCTCCCCTCCCAGTTACCTTCGTTCTGGAGTTCGA---TGAAGGACGGGGTCCACACGGCCCACTCGGTTTCCTCTTTCTCTGAACCGGGGATGCAGAACCTGAACCCGGGTAACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45602218 484 + 49145316 TTTCTGGTGAGCAGCCACACA--TCTGCCTTGTGTGAAAAATAATCCCAAGAAGAAATGTACCTGAGAACGTCTAGCCAAGGAGCACGATGTTGTAACACCCTGAC-TGATGAACCATCTGGTGCGACTGACAGACCATCTGGAGTGATTGACAGAACATCTGGGGTGGTTGACAGAACATCTGGGGTGGTTGACAGAACATCTAGGGTGATTGATTCCTCTGTACTTAGAGGGACACCA--AAACCAACATTTCAAGTATTATTAAC-AGAAAAATTGTCGTCTTCCCTCTGGAGCTCATGCAAGTCTTAGTTAACCTGAAGCGAGCTGTAGAAGCC-ACTAGAACCGACGGAGG-CCGCTGTGTGC-ACACTGGTGGCCTTCTCCCCTCCCAGCTC---TACTTCTAGAGTTCAG---TGAAGGAAGGGGTCTACATGGCCCACTAAGTTTCCTCTTTCTCTAAACTGGGGGTGCAGGATCTGAACCTGGGCAACTC i calJac3.chr22 C 0 T 37439 s canFam3.chr1 19780758 378 - 122678785 TTCCCAGTGAGCAAACAGACACCTCCACCTCATGTGGGAAGTAA-----AGAAGAAA--TACATGAGTCTGTATAGCAACGGAGTGTACTATTATAACCCCTCCATCCTATGCACCATCTG------------------------------------------------------------------------------------GGCTGACTGACTCTTCAAGACATAAGAGGAACTGGACAAATGGGTGTTCCGAGTAACATCACAGAGACA----------------CGAAAAATAACATGCATCTTGGTTAACTTGAAGAGACTTGTCACAACCAAATAGAAGAGAGAGAGATTAGTCATGTG----AGTGGGGGTCAGTTCCC------ATTCTCTGGGTTCTTGACTTTGGGCTTGAAGGAC----TCCATGGGGCCCATTCATTTTCCTTTTGGTCTGAACACAAGGAACAAGACCCAAGATTAGGCAACAT i canFam3.chr1 I 10665 C 0 a score=147523.000000 s hg38.chr19_GL949753v2_alt 356467 54 + 796479 CTGGGTATGAGTCCGGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC s panTro4.chr19 59301356 54 + 63644993 CTGGGTATGAGTCCGGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCGGTGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186456 55 + 60714840 CTGGGTCTGAGTCTGGCCCCAGAGCACCAGCTGTGGT--------------TTTGGCTGCCACGGTGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932866 54 + 106955855 CTGGGTATGAGTCCAGCCCCAGATCA-CAGCTGTGGT--------------TTTGGCTGCCGCGGTGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849223 55 - 64156825 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835650 55 - 59248254 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGCAGTGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800210 55 - 51301725 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCTGCGGTGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696874 55 - 50890351 CTGGGTATGAGTCCAGCCCCAGATCACCAGCTGTGGT--------------TTTGGCTGCCGTGGTGAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781136 69 - 122678785 CTGGGTATCTGTCCCACCAGAAATCACCAGCTGTGATCACATGACACTGTGCTAGGCTGCCACAGTGAC i canFam3.chr1 C 0 T 47437 e calJac3.chr22 45602702 37439 + 49145316 T a score=45397.000000 s hg38.chr19_GL949753v2_alt 356521 21 + 796479 CTTGGCAAAGTCCTGAGTCGT s panTro4.chr19 59301410 21 + 63644993 TGTGGCAAAGTCCTGAGTCGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186511 21 + 60714840 CGTGGCAAAGTCCTGAGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932920 21 + 106955855 CGTGGCAAAGTCCTGAGACGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849278 21 - 64156825 CGTGGCAACGTCCTGAGTCGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835705 21 - 59248254 CGTGGCAACGTCCTGAGTCGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800265 21 - 51301725 CGTGGCAACGTCCAGAGTCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696929 21 - 50890351 CGTGGCAACATCCTGAGTCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19781205 47437 - 122678785 T e calJac3.chr22 45602702 37439 + 49145316 T a score=513042.000000 s hg38.chr19_GL949753v2_alt 356542 209 + 796479 TTGCTGTTGTGGGTATGATGGACAGCTGCGACGTTTTCCTGGACTCCCACTGAA------ATCTTTAACTTCAAGATCAT-------CTTCTCCATCCCAACAGAACTCATCA-GGCCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGCACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG s panTro4.chr19 59301431 209 + 63644993 TTGCTGTTGTGGGTATGATGGACAGCTGCGACGTTTTCCTGGACTCCCACTGAA------ATCTTTAACTTCAAGATCAT-------CTTCTCCATCCCAACAGAATTCCTCA-GGCCCGGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGCACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186532 215 + 60714840 TTGCTGTTGTGGGTATGATGGACAGCTGCAACGTTTTCCTGGACTCCCATTGAAATCTTTATCTTTAACTTCAAGATCGT-------CTTCTCCATCCCAAGAGAACTCATCA-GGCCCAGAAGGCTCCT--AGC--------------------------------------------------CCCAGAAGTTCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGGACAAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAGAGAATCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3932941 216 + 106955855 TTGCTGTTGTGGGTATGATGGACAGCCTGGACGTTTTCCTGGACTCCCACTGAAATCTTTATCTTTAACTTCAAGATCGT-------CTTCTCCATCCCAACAGAACTCATCAGGGCCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTCCCCAGAGCTCTTCAGGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849299 212 - 64156825 TTGCTGTTGTGGGTATGACGGACAGCTGGGACATTTTCCTGGACTCCCACCGAAATCTTTATCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGG---AGTTCTCCAGAAAAGAATCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835726 212 - 59248254 TTGCTGTTGTGGGTATGACGGACAGCTGGGACATTTTCCTGGACTCCCACCGAAATCTTTATCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGG---AGTTCTCCAGAAAAGAATCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800286 265 - 51301725 TTGCTGTTGTGGGTATGATGGACAGCTGGGACATTTTCCTGGACTCCCACCAAAATCTTTACCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAACGGGACTCATCA-GACCCAGAAGGCtccc--agccccagaggttcccagaggttcccagacattcccagaggttcccagaggttcccagaggttcccagagCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCCGGAGAAGTTCTCCAGAAAAGAATCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3696950 215 - 50890351 TTGCTGTTGTGGGTATGATGGACAGCTGGGACATTTTCCTGGACTCCCACTGAAATCTTTACCTTTAACGTCAAGATCGT-------CTTCTCCATCCCAATGGGACTCATCA-GACCCAGAAGTCTCCC--AGC--------------------------------------------------CCCAGAGGTTCCCAGAGCTCTTCACGTGGAATGTTGAGTCTGGACCAGCCAGGATGGTGACTCTGGAGAAGTTCTCCAGAAAAGAATCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19733768 216 - 122678785 TTGCTGTCATGTACATGATGGAGAACTTGGCC-TTGTCCTTGGGTTCCAGTGCAGGCTGTCTCTC-----CCAAGGCCATAACTTTCCCTCTTTATGCAGGAGGTACTCCT---GGGCCTTCAGGCTCCCCTGAC--------------------------------------------------ACCAGATGGTCACAGGTGTCCCCCAGGGGATCACAGAACCTGGCTCAGTCCAGATGGTGGGTTTGGGGAGGATCCCTGGAAGGAAACAAG i canFam3.chr1 T 47437 I 156 e calJac3.chr22 45602702 37439 + 49145316 T a score=194324.000000 s hg38.chr19_GL949753v2_alt 356751 106 + 796479 CATCTAGAGTCTCCTGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTGACCCCCTCAGCCCAGCCCTTCG------------------------------------GTACCCAGCATCCACTGTCCT s panTro4.chr19 59301640 106 + 63644993 CATCTAGAGTCTCATGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTGACCCCCTCAGCCCAGCCCTTTG------------------------------------GTACCCAGCATCCACTGTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56186747 142 + 60714840 CATCTAGAGTCTCATGAGTTTGAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGCCCTTCGGTACCCAGCACCCACTGTCCTGAGCCCAGCCCTTCCGTACCCAGCATCCACTGTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3933157 94 + 106955855 CACCTAGAGTCTCATGAGTTCCAGGCCCTTGGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCGCAGCCCTTCA------------------------------------GTACCCAGC------------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849511 85 - 64156825 CATCTAGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGTTCTTCG--------------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3835938 85 - 59248254 CATCTGGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCCCTCAGCCCAGTTCTTCG--------------------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800551 85 - 51301725 CATCTAGAGTCTCATGAGTTCCAGGCCCTGAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCCCAGTTCTTCG--------------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697165 106 - 50890351 CATCTAGAGTCTCATGAGTTCCAGGCCCTTAGAAATTTAGACTCCAGAACCACTGCCAAAGTAACCCTCTCAGCCCAGTTCTTCG------------------------------------GTACCCGGTATCCACTCTCCT i chlSab2.chr6 C 0 I 338 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T a score=3942.000000 s hg38.chr19_GL949753v2_alt 356857 15 + 796479 CAGCCCAGCCCTTCC s panTro4.chr19 59301746 15 + 63644993 GAGCCCAGCCCTTCC i panTro4.chr19 C 0 I 252 s ponAbe2.chr19 56186889 15 + 60714840 CAGCCCAGCCCTTCC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T e nomLeu3.chr10 3933251 0 + 106955855 C e chlSab2.chr6 3697271 338 - 50890351 I e papAnu2.chr19 3800636 0 - 51301725 C e macFas5.chr19 3836023 0 - 59248254 C e rheMac3.chr19 3849596 0 - 64156825 C a score=32551.000000 s hg38.chr19_GL949753v2_alt 356872 22 + 796479 GTACCCAGCATCCACTGTCCTG s panTro4.chr19 59302013 22 + 63644993 GTACCCAGCATCCACTGTCCTG i panTro4.chr19 I 252 C 0 s ponAbe2.chr19 56186904 22 + 60714840 GTACCCAGCATCCACTGTCCTG i ponAbe2.chr19 C 0 I 1458 s nomLeu3.chr10 3933251 13 + 106955855 ---------ATCCACTGTCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849596 22 - 64156825 GTACCCGGCATCCACTCTCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836023 22 - 59248254 GTACCCGGCATCCACTCTCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800636 22 - 51301725 GTACCCGGCATCCACTCTCCTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e calJac3.chr22 45602702 37439 + 49145316 T e chlSab2.chr6 3697271 338 - 50890351 I a score=34524.000000 s hg38.chr19_GL949753v2_alt 356894 26 + 796479 GTGGGAGTCCGCTGTGCTGCTCCAAG s panTro4.chr19 59302035 26 + 63644993 GTGGGAGTCCGCTGTGCTGCTCCAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933264 26 + 106955855 GTGGGAGTCCGTTGTGTTGCTCCAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849618 26 - 64156825 GTGGGAGTCCATTGTGTTGCTCCAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836045 26 - 59248254 GTGGGAGTCCATTGTGTTGCTCCAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800658 26 - 51301725 GTGGGAGTCCGTTGTGTTGCTCCAAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19733984 156 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45602702 37439 + 49145316 T e chlSab2.chr6 3697271 338 - 50890351 I a score=39934.000000 s hg38.chr19_GL949753v2_alt 356920 22 + 796479 AAGACAGACCCTCACCATTACC s panTro4.chr19 59302061 22 + 63644993 AAGACAGACCCTCACCATTACC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933290 22 + 106955855 AAGACAGACCGTCACCATTACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849644 22 - 64156825 AAGACAGACCCTCACCATTACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836071 22 - 59248254 AAGACAGATCCTCACCATTACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800684 22 - 51301725 AAGACAGATCCTCACCGTTACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697609 22 - 50890351 aaGACAGACCCTCACCATTACT i chlSab2.chr6 I 338 C 0 e canFam3.chr1 19733984 156 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45602702 37439 + 49145316 T a score=172604.000000 s hg38.chr19_GL949753v2_alt 356942 62 + 796479 GGAAAGACTGACCCTCCTGTGTCCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC s panTro4.chr19 59302083 62 + 63644993 GGAGAGACTGACCCTCCTGTGTCCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933312 62 + 106955855 GGAGAGACTGACCCTCCTGTGTTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849666 62 - 64156825 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836093 62 - 59248254 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800706 62 - 51301725 GGAGAGACTGACCCTCCTGAATTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGAGAAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697631 62 - 50890351 GGAGAGACTGACCCTCCTGTGTTCAGGTCCTGTGGCCCAGACTCAGCTCTGGAAGGGAAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45565263 62 + 49145316 GGACAGACTGACCTGCCTGCACATGGGTCCTGGGGCCCAAACTCAGCCCTGGAAGAGAGTTC i calJac3.chr22 T 37439 I 37956 s canFam3.chr1 19734140 62 - 122678785 GGACAGACTCACCTGCTTGTACTCGGGTCCTGGAGCTCACACTCAGCCCTGGAAGAGAGGTT i canFam3.chr1 I 156 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I a score=5348.000000 s hg38.chr19_GL949753v2_alt 357004 2 + 796479 TG s panTro4.chr19 59302145 2 + 63644993 TG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933374 2 + 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849728 2 - 64156825 TG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836155 2 - 59248254 TG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800768 2 - 51301725 TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697693 2 - 50890351 TG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19734202 2 - 122678785 TG i canFam3.chr1 C 0 I 47045 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=574348.000000 s hg38.chr19_GL949753v2_alt 357006 315 + 796479 GATTTACAATGCTCAGTACGTCGCTCAAAATCTGCACTCGATGACGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGACAATGCCGTCCCGCCGTCATCTCTGCTCCCTCTTCGATCGCTAAGCTCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCACCTCCCAGCCCCAATCCCTCAATCCCTCGCCTGCCGTGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCATGGTAAGGGGCACCGTGCTGCCTGCGCCCGCCCCGCTGTGCA s panTro4.chr19 59302147 315 + 63644993 GATTTACAATGCTCAGTACTTCGCTCAAAATCTGCACTCGATGACGTCTGCAAGCTCTTGGTCCCAGCCTGGACTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCTGCCGTCATCTCTGCTCCCTCTTCGATCGCTAAGCTCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCAATCCCTCGCCTGCCATGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCATGGTAAGGGGCACCGTGCTGCCTGCGCCGGCCCCGCTGTGCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933376 315 + 106955855 GATTTAAAATGCTCAGCACTTCACTCAGAATCTGCACTCGATGACGTCTGTAAGCTCTTAGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGAGCAGATAATGCCTTCCTGCCATCGTCTCTGCTCCCTCTTCAATCGCTAAGCTCCCACAGCATTGATCTAACCAGACAGGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCGATCCCTCCATCCCTCGCCTGCCATGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAAGCGTGGGAAGGGGCACCGTGCTGCCTGCGCCGGCCCCGCTGTGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 3849730 315 - 64156825 GATTTAAAATGCTCAGTGCTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTCTTCAATCACTAAATCCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCACTGTGCTGCCTGCACCCGCCCCGCTGTGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836157 315 - 59248254 GATTTAAAATGCTCAGTACTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTCTTCAATCACTAAACCCCCACAGCATTGATCTAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCAATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCACTGTGCTGCCTGCACCCGCCCCGCTGTGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3800770 315 - 51301725 GATTTAAAATGCTCAGTACTTCGCTCGAAATCTGCACTTGATGAAGTCTGTAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCTGCCATCATCTCTGCTCCCTCTTCAATCACTAAATCCCCACAGCATTGATCTAACCAGACCTGGGCCCAGGGAGAGAGCTGTCTTCCCCGCCTCCCAGCCCCGATCCCTCGATCCCTCACCTGCCACGCCAAGACTGGTCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGCGGCGCTGTGCTGCCTGCACCGGCCCCACTGTGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3697695 315 - 50890351 GATTTAAAATGCTCAGTACTTTGCTCAAAATCTGCACTTGATGAAGTCTATAAGCTCTTGGTCCCAGCCTGGGCTGCGAAGCCTGAGGCTTGGGCAGATAATGCCTTCCCGCCATCATGTCTGCTCCCTTTTCCATCACTAAACCCCCACAGCATTGATCCAACCAGACATGGGCCCAGGGAGAGAGCTGTCTTCCCCACCTCCCAGCCCCGATCCCTCGATCCCTCGCCTGCCATGCCAAGACTGATCAAGGGAAAGTCCAGGAAGAAACCATGGTAAGGGGCACTGTGCTGCCTGCGCCGGCCCCACTGTGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19734204 47045 - 122678785 I e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=947721.000000 s hg38.chr19_GL949753v2_alt 357321 488 + 796479 GAATGCAGAGGCTCAGGATGCGGTGCGCAGAGACTCAGTCCCAACCGTCTTGTGG-CTTCTTACCACGTATCTCCCAGGAAGTCA--CCATGAGGCTTAGTTCTTCCTTCCTGTGACTGG-GGTAAAGGAGAGAACTGTCTCCTTGGACATCAT------------CATCCATACGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCACGGCTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATTCACAATATACAACCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCAAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACGTTTCCAGGCGCCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCAACGGACCTCACAGTCTAATGTGGAGGGCACACCTC-------------TGACTATTC s panTro4.chr19 59302462 488 + 63644993 GACGGCAGAGGCTCGGGATGCGGTGCGCAGAGACTCAGTCCCGACCGTCTTGTGG-CTTCTTACCACGTATCTCCCAGGAAGGCA--CCATGAGGCTTAGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCCTTGGACATCAT------------CATCCTTACGCCCGGCCCAAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCACGGCTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATTCACAGTATACGACCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCCAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACATTTCCAGGCGCCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCAACGGACCTCACAGTCTAATGTGGAGGGCACACCTC-------------TGACTATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3933691 488 + 106955855 GACAGCAGATGCTCGGGATGCGGTGCTCAGAGACTCAGTCCCGACCGTCTTGTGG-CTTCTTACCAAGTATCTCCCAGGAAGGCA--CCATGAGGCTTAGTTCTTCCTTCCCGTGACTGG-GGTAAAGGGGAGAACTGTCTCCTTGGACATCAT------------CATCCATATGCCCAGCCCGAACGTGATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGGCTATGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTTCGCCCCATCCAGAATATACAGCCTTCGAT-GGGCCACCTCCCCAGTGAGGCTTCATCAAGGGGGCTTGGTCAACTTCCTTTTTG--TGTGAACGAAAACATACATTTCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--AAGCCACACAAGTCAACGGACCTCACAGTCTAACATGGAGGGCACACCTC-------------TGACTATTC i nomLeu3.chr10 C 0 I 305 s rheMac3.chr19 3850045 487 - 64156825 GACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGGTCCCGACCGTCTTGTGG-TTTCTTATCAAGTATCTCCCAGCAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACCGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTGTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGA-GGGGAATCTGAACACCAACCCGGAGGTCAGACTTGAAGAAGACGGCGACACTGCCTACACCCCATCCAGAATATACAACCTTCAGT-GGACCACCTCCCCAGTGAGCCTTCATCCATCAGGCTTGGTCAACGTTCTTTTTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 3836472 488 - 59248254 GACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGGTCCCGACCGTCTTGTGG-TTTCTTATCAAGTATCTCCCAGCAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACCGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCCGGAGGTCAGACTTGAAGGAGACGGTGACGCTGCCTACACCCCATCCAGAATATACAACCTTCAGT-GGACCACCTCCCCAGTGAGCCTTCATCCATCAGGCCTGGTCAACGTTCTTTTTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3801085 489 - 51301725 AACGGCAGATGCTCGGGATGCGGTGCTCAGAGACTCGgtccccactgtcttctgg-tttCTTATCAAGTATCTCCCAGGAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGGCAACCATGACTGTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGACGGCGACGCTGCCTACACCCCATCCAGAATATACAACCTTCAGTGGGGCCACCTCCCCAGTAAGCCTTCATCCATCAGGCTTGGTCAACGTTCTTTTTG--TGTGAATCAAAGCATACATATCCAGGCACCTATTAA-GGGCTTGAGTCTGTGTCAGAGAC--GAGCCACGCAAGTCCACGGACTTCACAGTCTAATGTGGAGGACACACATC-------------TGAGTATTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3698010 488 - 50890351 GACAGCAGATGCTCGGGATGCAGTGCTCAGAGACTCGGTCCCGACTGTCTTGTGG-TTTCTCACCACGTATCTCCCAGGAAGGCA--CCATGAGGCTTCGTTCTTCCTTCCCGTGACTGG-GGTAAAGGAGAGAACTGTCTCTTTAGACATCAT------------CATCCATATGCCCGGCCCGAACGTCATCTCTGACCCAAACACCAAATCCAGACGGACAACCATGGCTCTGGGGTGTGGAGGGGGAATCTGAACACCAACCTGGAGGTCAGACTTGAAGGAGAGGGTGATGCTGCCTATGCCCCATCCAGAATACACAACCTTCAGT-GGGCCACCTCCCCAGTGAGCCTTCATCAATGAGGCTTGGTCAACGTTCTTTCTG--TGTGAATCAAAACATACATATCCAGGCACCTATTAA-GGGTTTGAGTCCATGTCAGAGAC--GAGCCACACAAGTCcacggacctcacagtctaatgtggaggacacacatc-------------tgagtattc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781249 501 - 122678785 GAAGACAGATGGACAGAGTGTGGGAGTCAAAGACTCAGTCCCAATCATCTTGTGGTTTTCTTACCAAGGGTCCTACAGAAAGGTCATCCACAAGACCTAGTCCCTCCTTCCTTTGACTGGAAGGATGGGACAGAACTGCTCCATCCCACCCCCTGACTTTCTTTTCCACACTCACGCCCTCCTTGAACATTATTTCAGTCTGAAACGTGAAGTCCAGATTGGCAACCCTGGCTCTGGGGTGTGGAGAGGGATTCCGAGCACTGACTCAAGTGTTAGATGTAAG--------------------TGTCTCACAAAGAATGCAGTACCTCAAGC-CAGTTATCTCCCCAAGGAATTTTAATAAATGTGATTTGGTGAGTTTTCTTTTTTCCCCCCAACTaatacatatttat-tgggtacctcgtaaggggcctgtgcctgtcccaaatgcttgagatacacaaattaatggagctcatggtctaatgaggaagacaCCTATCGAACTGACCTATTGAACTATTC i canFam3.chr1 I 47045 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=7644.000000 s hg38.chr19_GL949753v2_alt 357809 3 + 796479 AAA s panTro4.chr19 59302950 3 + 63644993 AAA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934484 3 + 106955855 aaa i nomLeu3.chr10 I 305 C 0 s rheMac3.chr19 3850532 3 - 64156825 aaA i rheMac3.chr19 C 0 n 0 s macFas5.chr19 3836960 3 - 59248254 aaA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3801574 3 - 51301725 AAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 3698498 3 - 50890351 aaA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19781750 3 - 122678785 AAA i canFam3.chr1 C 0 I 18 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I a score=9683.000000 s hg38.chr19_GL949753v2_alt 357812 9 + 796479 AGTCATATA s panTro4.chr19 59302953 9 + 63644993 TGTCATATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934487 9 + 106955855 aGTCCTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3836963 9 - 59248254 CGTCTTATA i macFas5.chr19 C 0 T 44204 s papAnu2.chr19 3801577 9 - 51301725 CGTcttata i papAnu2.chr19 C 0 I 1300 s chlSab2.chr6 3698501 9 - 50890351 TGTCGTATA i chlSab2.chr6 C 0 n 0 s canFam3.chr1 19781771 9 - 122678785 GGTTATATG i canFam3.chr1 I 18 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e rheMac3.chr19 3850535 0 - 64156825 I a score=6019.000000 s hg38.chr19_GL949753v2_alt 357821 22 + 796479 --TAGCATATTAACCGTAGATTTT s panTro4.chr19 59302962 22 + 63644993 --AAGCACATTAACCGTAGATTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934496 22 + 106955855 --AAGCATATTAATGGTAGATTTT i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19781780 24 - 122678785 TAACCTACAGTAACCTTAGttttt i canFam3.chr1 C 0 I 186 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=84867.000000 s hg38.chr19_GL949753v2_alt 357843 258 + 796479 AACAAATTAGCCTT-GAAATACCTGCAGTTTGTCACAATGGAAGGCTCACTTCTCACTGGGTGACACGTCCATATGGGGGCCCCCGGTTGGCAGTTGGAGCTCCTCCATCAGGTGACTCAGGTGCCCA-GATTCTTCCAACTTTGGGGTCCAACCTCCCCTAGAACCTTGGAGTGCTCTGTTACCAGTGAGGGGAAAGAGGAAGAGAGAGTGGAAAGGGCTCATCCGTGCCTTTTAAATA----AAAAATCTGAATGTgaccag s panTro4.chr19 59302984 258 + 63644993 aacaaattagcctc-gaaatatctgcagtttgtcacaatggaaggctcacttctcactgggtgacacgtccatatgggggcccccggttggcagttggagctcctccatcaggtgactcaggtgccta-gattcttccaactttggggtccaacctcccctagaacctcggagtgctctgttaccagtgaggggaaagaggaagagagagtggaAAGGGCTCATCCATGCCTTTTAAACA----AAAAATCTGAATGTGACGAg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 3934518 245 + 106955855 AACGAATTAGCCTG-GAAATACCTGCAGTTTGTCACAATGGAATGGTCACTTCTCACTGGGTGACACTTCCATAT-GGGGTCCCAGGTTGGCAGTTGGAGCTCCTCCACTGGGTGACTCAGGTGCCCA-GATTCTTCCAACTTTGGGGTCCAACCTCCCCTAGAACCTTGGAGTGTTCTGTTACCAGCGAGGGGAAAGA------------GGAAAGGGCTCATCCGTGCCTTTTAAATA----AAAACTCTGAATGTCGCTTG i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19781990 231 - 122678785 AATAAATCAACCTCAAAAATATCAGTAGTTCATGGCAATGGAATGTTTATTGCTC------TGTCAGG----TATGGGTGTCCCAGATTGACACTTGGAGCTCCTCCATGGGGCGACTCATGCTCCCAGGATTCTTCTATATTTTGGCTCCAACACCTCCCAAGACCTTGGAGTACTCTGTCACCAGAAAGGAGAGAGA----------GTAAAAATGGTACATCCAT---TTCAAAACAAAACAAAActctga---------- i canFam3.chr1 I 186 C 0 e ponAbe2.chr19 56186926 1458 + 60714840 I e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=5034.000000 s hg38.chr19_GL949753v2_alt 358101 14 + 796479 gcgcagtggctcac s panTro4.chr19 59303242 14 + 63644993 gcatggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188384 14 + 60714840 gtgcggtggctcac i ponAbe2.chr19 I 1458 C 0 s nomLeu3.chr10 3934763 14 + 106955855 TCACTGCTGCTCAC i nomLeu3.chr10 C 0 T 77241 s canFam3.chr1 19782221 10 - 122678785 ----agtgacacat i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=414.000000 s hg38.chr19_GL949753v2_alt 358115 2 + 796479 gc s panTro4.chr19 59303256 2 + 63644993 gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188398 2 + 60714840 gc i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19782231 2 - 122678785 at i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e nomLeu3.chr10 3934777 77241 + 106955855 T e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=9834.000000 s hg38.chr19_GL949753v2_alt 358117 17 + 796479 ctgtaatcccagcactt s panTro4.chr19 59303258 17 + 63644993 ctgtaatcccagcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188400 17 + 60714840 ctgtaatcccagcactt i ponAbe2.chr19 C 0 I 505 s nomLeu3.chr10 102922007 17 - 106955855 ctgtaatcccagcactt i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19782233 17 - 122678785 ctcttctgctcacattc i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=107353.000000 s hg38.chr19_GL949753v2_alt 358134 344 + 796479 ----tgggaggccaaggcaggcagatcacaaggtcaagagatggagaccagccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccaagacaggtagatcacaaggtcaggagatcgagactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaattagccgggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctggacgacagagcgagactccatctc-------aaaaaaaaaaaaaaaaa s panTro4.chr19 59303275 263 + 63644993 ----tgggaggccaa------------------------------------------------------------------------------------gacaggtagatcacaaggtcaggagatcgagactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaattagccgggcatggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagattgcgccactgcactccagcctgggcgacagagcgagactccgtctc----aaaaaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56188922 342 + 60714840 ----tgggaggccaaggcaggcagatcagaaggtcaagagatggagaccagccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccaagacaggtagatcacaaggtcaggagattgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaacaattagccaggcatggtggcgggtgcctgtagtcccagctacttgggaggctaaggcaggagaatggtgtgaacccaggaggtggagcttgcagtgagccaagattgcgccattgcactccagcctaggcaacagagcaagactctgtctc---------aaaaaaaaaaaaaaa i ponAbe2.chr19 I 505 C 0 s nomLeu3.chr10 102922024 346 - 106955855 ----tgggaggccaaggcaggcagatcacaaggtcaagagatggagaccggccaggcgcggtggctcatgcctgtaatcccagcaccttgggaggccgagacgggcgggtcacgaggtcaggagatagagaccatcctggctaacacagtgaaaccccatctctact-aaaatacaaaaaaattagccgggcatggtggccggcgcctgtagtcccaactactcaggaggctgaggcagaagaatggcgtgaacccgggaggc-aagcttgcagtgagcc-agattgtgccactgc-ctgta-cctgggcgacagagcgagactccgtTCTCaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19782250 112 - 122678785 caaaggtgaggccaa---------gtcacaagtccac------------------------------------------------------------------GGTGGGT------GCCATGAGGCAGG------------TAACACTGT-----------------------------------GCCCAGTAGGGCGGCTGTCTCTGGT------------------------------------------------------------------------GATCATGCCA-TGCTATCCA---------------AGAGAAGCCAT--------------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45565325 37956 + 49145316 I e chlSab2.chr6 3698510 0 - 50890351 I e papAnu2.chr19 3801586 1300 - 51301725 I e macFas5.chr19 3836972 44204 - 59248254 T e rheMac3.chr19 3850535 0 - 64156825 I a score=247964.000000 s hg38.chr19_GL949753v2_alt 358478 178 + 796479 aagaggtggagaccatcctggccaacatggtgaaaccccgtctctgctaaaaatacaaaactaagctgggtg-tggtggtgcacacctgtagtcccagctacttggaaggctgaggcatgagaatcacttgaacctgggagacagaggttgtagtgagccgagatcgagccactgcacc s panTro4.chr19 59303538 176 + 63644993 aagagatggagaccatcctggccaacatggtgaaaccccatctctcctaaaaatacaaaacttagctgggtg-tggtggtgcacacctgtagtctcagctactcggaaggctgaggcatgagaatcacttgaacctgggagacaga--ttgtactgagccaagatcgagccactgcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189264 178 + 60714840 aagagatggagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaagttagctgggtg-tggtggcgcacacctgtagtcccagctactcgggaggctgagacaggagaatcacttgaacctgggagacagaggttgcagtgagccgagatcgagccactgcacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922370 175 - 106955855 aagagatggagaccatcctggccaacatggtgaaaccccgtctctgttaaaaatacaaaagttagctgggtg-tggtggcgcaca-ctgtagtcccagctactcgga--gctgaggcaagagaatcacttgaacctgggagacagaggttgtagtgagccaagatcgagccactgcacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55286950 178 + 59248254 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaagttagctgggcg-tggtggcgggcacttgtaatcccagctactcgggaggctgaggcagatgaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgcacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47384893 177 + 51301725 aagagatggagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaagttagctgggcg-tggtggcgggcacttgtaatcccagctactcgggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgtagtgagccaagatcacaccactgca-c i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3406350 175 - 49145316 aggagttcgagaccagcctggccgacatggag-aaccttgtgtctactaaaaatacaaaa---agctgaccattggtatcaggcacctgcaatcacagctatttgggaggctgaggcaggagaatcgcttgaacccaggaggcaggggtggcagtgagccaagattgtgccactgcact i calJac3.chr22 I 35 n 37956 s canFam3.chr1 19782362 93 - 122678785 -----------GACATTCTGGTGCTCAGTAAGCCACCCCTGCTCATGGAAGAA--------------GGGCA--------------CTAAA--------------GAAAGCAGTGGC----------CTTGAGCTTGGGTGAAAAGGG--------------GACTTGAC--------- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3698510 0 - 50890351 I e rheMac3.chr19 3850535 0 - 64156825 I a score=49359.000000 s hg38.chr19_GL949753v2_alt 358656 44 + 796479 ccagcctggg-gacagagcaagactccgtctc-------------agaaaaaaaaaaa s panTro4.chr19 59303714 45 + 63644993 ccagcctggg-gacagaacgagactccgtctc------------aaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189442 40 + 60714840 ccagcctggg-tacagagcgagactccgtctc-----------------aaaaaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922545 57 - 106955855 ccagtctggg-ggcagagcgagattccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287128 45 + 59248254 ccagcctggg-gacagagtgagactctgtctc------------aaaataaataaaCA i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47385070 45 + 51301725 ccagcctggg-gacagagtgagactctgtctc------------aaaataaataaata i papAnu2.chr19 C 0 I 13 s calJac3.chr22 45603281 46 + 49145316 CCAGACTGGGCTACAGAGTGAGACCCCATCTC------------taaataaataaata i calJac3.chr22 I 37956 I 12 s canFam3.chr1 19782455 37 - 122678785 CTTGTGTGTG-GATATAATAACACT--GTTTC------------GGCAGGAG------ i canFam3.chr1 C 0 C 0 e chlSab2.chr6 3698510 0 - 50890351 I e rheMac3.chr19 3850535 0 - 64156825 I a score=8162.000000 s hg38.chr19_GL949753v2_alt 358700 7 + 796479 aaTCCTA s panTro4.chr19 59303759 7 + 63644993 aatcCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189482 7 + 60714840 aaTCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922602 7 - 106955855 aaTCCTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287186 7 + 59248254 AATAGGA i macFas5.chr19 I 13 I 7 s papAnu2.chr19 47385128 7 + 51301725 aatccTA i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47082709 7 + 50890351 AATCCTA i chlSab2.chr6 I 7 C 0 s calJac3.chr22 45603339 3 + 49145316 aat---- i calJac3.chr22 I 12 C 0 e canFam3.chr1 19782492 0 - 122678785 C e rheMac3.chr19 3850535 0 - 64156825 I a score=112509.000000 s hg38.chr19_GL949753v2_alt 358707 47 + 796479 CGACCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTAACTCCAGGG s panTro4.chr19 59303766 47 + 63644993 TGACCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTGACTCCAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189489 47 + 60714840 CGACCTTGTGTGAAAAGGAGACTCAACCCTCAGAGCTAACTCCAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922609 47 - 106955855 CGATCTTGTGTGAAAAGGGGACTCAACCCTCAGAGCTGACTCCAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186561 47 + 64156825 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i rheMac3.chr19 I 37 C 0 s macFas5.chr19 55287200 47 + 59248254 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47385135 47 + 51301725 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47082716 47 + 50890351 CGACCTTGTGTGAAAAGGGGACTCGACCCTGAGAGCTGACCCCAGGA i chlSab2.chr6 C 0 I 46 s calJac3.chr22 45603342 32 + 49145316 -------------aaatGGGCATTGACCCTGAGAGCCGGC-CCAGG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19782492 29 - 122678785 ------TGCATGGACCGA----TAAACTCCTGG--------CCTGGG i canFam3.chr1 C 0 C 0 a score=27088.000000 s hg38.chr19_GL949753v2_alt 358754 29 + 796479 AAGCCACCT-GCAGTGTGGAGTGGAATT-GG s panTro4.chr19 59303813 29 + 63644993 AAGCCACCT-GCAGTGTGGAGTGGAACT-GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189536 29 + 60714840 AAGCCACCT--CACTGTGGAGTGGAATCAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922656 29 - 106955855 AAGCCACCT-ACAGGGTGGAGTGGAATC-AG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186608 29 + 64156825 TAGCCACCT-GTGCTGCGTAGTGTAATC-AG i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55287247 29 + 59248254 TAGCCACCT-GTGCTGCGTAGTGTAATC-GG i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47385182 29 + 51301725 TAGCCACCT-GCTCTGCGTAGTGTAATC-GG i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45603374 30 + 49145316 AAGCCACTGAGCACTGCCAGGTGTAGTC-AG i calJac3.chr22 C 0 I 8 s canFam3.chr1 19782521 14 - 122678785 ------------AAAGCAGAGTGGAG----- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47082763 46 + 50890351 I a score=237929.000000 s hg38.chr19_GL949753v2_alt 358783 106 + 796479 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCTAATCAGGAGACAA-TTTTTCC----------TGTTGT--- s panTro4.chr19 59303842 106 + 63644993 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCCAATCAGGAGACAA-TTTTTCC----------TGCTGT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189565 106 + 60714840 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGATGGAGGAGACAGCTTCTGTGAAAGCCCCAATCAGGAGACAA-TTTTTCC----------TGTTGT--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922685 106 - 106955855 GGCTGAGGACTGACGAGCTGGCGACAGGAAGAGCA---------GCT-GGGGGAGACGTGGACGGAGGAGACAGCTTCTGTGAAAGCCCCCATCAGGAGATAA-TTTTTCC----------TGTTGT--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186638 95 + 64156825 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTTGGTGAAAGTCCCCATCAGCAGATAA-TTTTTCT----------TGTCGT--- i rheMac3.chr19 I 1 I 1 s macFas5.chr19 55287277 95 + 59248254 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTTGGTGAAAGTCCCCATCAGCAGATAA-TTTTTCT----------TGTCAT--- i macFas5.chr19 I 1 I 1 s papAnu2.chr19 47385212 94 + 51301725 GGCTGAGGACTGAC------------TGAAAAGCA---------GCTGGGGGGAGACTTGGACGGAGGAGACAGCTTCGGTGAAAGTCCCCATCAGCAG-TAA-TTTTTCC----------TGTTGT--- i papAnu2.chr19 I 1 T 7974 s chlSab2.chr6 47082809 96 + 50890351 GGCTGAGGACTGAC------------TGAAGAGCA---------GCTGGGGGGAGACGTGGACGGAGGAGACAGCTTCTGTTAAAGTCCCCATCAGCAGGTAATTTTTTCC----------TGTTGT--- i chlSab2.chr6 I 46 I 1 s calJac3.chr22 45603412 113 + 49145316 GGCTGAGGGCTGAGGAGCCGGCGACAGGAAATGCAGCATGGGGGGCT-GCGGGAGACGTGGACGGAAGAGAAAGTCTCTGTGAAA-CCCCAGTCAGGAGGTAA--TTTGCC----------TGTTGT--- i calJac3.chr22 I 8 C 0 s canFam3.chr1 19782535 81 - 122678785 GGCTA---------------------GGAAGAG-----------TCT-GGG-----------CAGAGGGGAAAGCTTCTGTGGGAG----AGTCAGGAAACAA-CTTTGCCAGCTCAGACAAGTTGTAGC i canFam3.chr1 C 0 C 0 a score=1048618.000000 s hg38.chr19_GL949753v2_alt 358889 378 + 796479 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAC-GAAGAATATGTGTACTGATTGAGCAGGAGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtatggcatcatcatatttttgtctaaaatgtatcTGTAAGACCACTTCCTGAAGTCAGAATTGCACGAAGCAAAAACAGTAagaggtaacg-ttttctgagcatttactttatgccagacactgccctgagtccccagtatggatagtttacttaattttcccaacaactttggaaaggtgttttcatcactagactcattttaatgatgagaacactga-actcagag-g-ttaattagtttgattagtgt s panTro4.chr19 59303948 378 + 63644993 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAA-TAAGAATATGTGTACTGATTGAGCAGGCGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtatggcatcatcatatttttgtctaaaatgtatctgtaagactgctCCCTGAAGTCAGAATTGCACGAAGCAAAAACagtaagaagtaacg-ttttctgaacatttactttatgccagacactgccctgagtccccagtatggatagtttacttaattttcccaacaactttggaaaggtgttttcatcactagactcattttaaagatgagaacactga-actcagag-g-ttaattagtttgattagtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56189671 379 + 60714840 AAGTTAAGTGGACTCC-AGATGG-AAAAATAATAAGGAAGAATATGTGTATTGATTGAGCAGGAGTCTCTAAAaggccaaataaagttttggtattttaccctc-aagagagtgggacaggttttgagcataagtgtggcatcatcatatttttgtctaaaatgtatcTGTAAGACCGCCTCCTGAAGTCAGAATTTCACGAAGTAAAAACAGTAagaggtaacg-ttttctgagcatttactgtatgccagacactgccctgagtcccctgtatggatagtttgtttaattttcccaacaactttggaaaggtgttttcatcactagactcattttacagaggagaacactga-actcagag-g-ttaattagtttgattagtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102922791 379 - 106955855 AAGTTGAGTGGACTCC-AGATGG-AAAAATAATAAGGAAGAATATGTGTATTGATTGAGCAGGAGTCTCTAAAAGGCCAAATAAAGTTTTGGTATTTTACCCTC-AAGAGAGTGGGACAGGTTCTGAGCATATGTGTGGCATCCTCATATTTTTGTCTAAAATGTATCTGTAAGACCACTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcatttactttataccagacactgccctgagtcccctgtatggatagtttacttaattttcccaacaactttggaaagctgttttcatcactagactcattttacagatgagaacactga-actcagag-g-ttaattagtttgattagtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60186734 365 + 64156825 AAGTTGAGTGGATTCC-AGATGG-AAAAATGATAAGGAAGAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-GAGAGAGTGGGAAAG-------------GTGTGGCATCATCATATTTTTGTCTAAAACGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctct-agtcccctgtatggatagttcacttaactttcccaacaactgtggaaaggcattttcatcactagactcattttacagatgagaaccctga-actcagag-g-ttaattagtttgattagtgt i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55287373 366 + 59248254 AAGTTGAGTGGATTCC-AGATGG-AAAAATAATAAGGAAGAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-GAGAGAGTGGGAAAG-------------GTGTGGCATCATCATATTTTTGTCTAAAACGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGAAGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctctgagtcccctgtatggatagtttacttaactttcccaacaactttggaaaggcgttttcatcactagactcattttacagatgagaaccctga-actcagag-g-ttaattagtttgattagtgt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 3802886 378 - 51301725 AAGTTGAGTGGATTCC-AGATGGAAAAAATAACGAAGAAGAGAATGTGTATGGGTTGAGCGGGAGTCTCTAAAAGGCCAAGTAGAGTTTTGGTATTTTACCCTC-AAGAGAGTGGCAAAGGTTCTGAGCCTCCGTGTGGCATCATCATATTTTCGTCTGGAACATATCGGTGAGACCGCTTCCCGAAGTCAGAACTGCATGAGGCAATCGAAGGAAGAGGTAAC--TTTGCTGATCTCTTGCTCTATGCCAGACACTGCCCTGAGTCCCCCTTACGGCTAGtttctttaa---tcctcacaactgtGGGAAGATATTGTCATCCTTAGGCcagctttacagatgagaacactgacgCTCAGGGAG-TTAATTAATTTGATGAGCCT i papAnu2.chr19 I 1300 C 0 s chlSab2.chr6 47082906 366 + 50890351 AAGCTGAGTGGATTCC-AGGTGG-AAAAATAATAAGGAAAAGTATGTGTATTGATTGAGCGGGAGTCTCTAAAAGGCCAAATGAAGTTTTGGTATTTTACCCTC-AAGAGAGTGGGAAAG-------------GTATGGCATCATCATATTTCTGTCTACAATGTTTCTGTGAGACCGCTTCCTGAAGTCAGAATTGCACGACGCAAAAAAagtaagaggtaacg-ttttctgagcacttactttatgccagacactgctctgagtcccctgtatggatagtttccttaattttcccaacaacttcggaaaggtgttttcatcactagactcattttacagaggagaaccctga-actcagag-g-ttaattagtgtgatcagtgt i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45603525 353 + 49145316 AAGTTGAGTGGACTCC-AG-TGG-GAAAATAATGTGGAACAGTATGTGCATTGATTGAGTAGGAGTGTCCAAAAGGCCAAATAAAGTTTTGGTGTTTTACCCTC-------GTGGGACGGGTTCTGAACGCAAGTGTGGCGTCATCATATTTTTGTCTAAAATGTATTTCTAAGACCGCTTCCTGAAGTCAGACTTGCACGAAGCTGTA------------aatg-tcttctgagccctcgctctatgccagaccctgctctgaatcccctgtatggatagt----ttaattttc---acagctttggaaaggagttttcatcactagacccattttacagatgagaacactga-actcagag-g-tcggttcatttgattggtgt i calJac3.chr22 C 0 C 0 s canFam3.chr1 19782616 362 - 122678785 AATTCCAGAAGAGCCAGAGATGG-GAGAACTAAGCGGGAAATAGTGGGGACTGAATTA------------------CCGTGTAAAGATTTGGGATTTTATCTTTAAAGATTATGGGTGAAGTGTGAAATATAAGCCTGGCATAATCAGATTTTTGTCTGAAACAT-TCACTATGAATCATTTATGGAGACAGAACCCGAGGAGGCAGTAAAaatcatggcaaacatttttctgagcactta---tgtggcagatgctattgtgagtcttacaaatgggtagttcacttaatcagcatcatagctcaggaaaggagtttccattattagacccattttataaatgagaatactgatgcttagag-gattaattaatttgATTAGTgt i canFam3.chr1 C 0 N 0 a score=37221.000000 s hg38.chr19_GL949753v2_alt 359267 15 + 796479 catgtattaacatgc s panTro4.chr19 59304326 15 + 63644993 cgtgtattaacatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190050 15 + 60714840 catgcattaacatgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923170 15 - 106955855 catgcattaacatgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187099 15 + 64156825 catgcattaacacgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55287739 15 + 59248254 catgcattaacacgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3803264 15 - 51301725 CTTGCACCAAGACGC i papAnu2.chr19 C 0 T 41526 s chlSab2.chr6 47083272 15 + 50890351 catgcattaacatgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45603878 15 + 49145316 cacgcaTCAACATGC i calJac3.chr22 C 0 C 0 a score=192071.000000 s hg38.chr19_GL949753v2_alt 359282 81 + 796479 at-aatttcatggaaggaactggatttcaacccaggAAG-AAAGTATGTCCTTACC-----tattattattattattattat------tattat s panTro4.chr19 59304341 66 + 63644993 at-aatttcatggaaggaactggatttcaacccaggaag-AAAGTATGTCCTTACC--------------------tattat------tattat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190065 78 + 60714840 at-aatttcatggaaggaactggatttcaacccaggAAG-AAAGTATGTCCTTACt--------tattattattattattat------tattat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923185 87 - 106955855 at-aatttcatggatggaactggatttcaacccaggaagAAAAGTATGTCCTTACCtattatattattattattattattat------tattat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187114 81 + 64156825 at-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----tattattattattattattat------tattat i rheMac3.chr19 C 0 M 688 s macFas5.chr19 55287754 81 + 59248254 at-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----tattattattattattattat------tattat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47377332 75 + 51301725 AT-AATttcatggatggaactggattTCAACCCAGGAAG-AAAGTATGTCCTTacc-----tactattattattattattat------------ i papAnu2.chr19 T 7974 C 0 s chlSab2.chr6 47083287 87 + 50890351 at-aatttcatggatggaactggatttcaacccaggaag-AAAGTATGTCCTTACC-----TataataataataataataataataatTAttat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45603893 82 + 49145316 ATGGATTTCATGGATGGAACTGGGTTTCCACCCAGGAAG-GAAGGATGTCCTTACC-----TTCCTTCCttaataataaaat------tattat i calJac3.chr22 C 0 C 0 a score=375270.000000 s hg38.chr19_GL949753v2_alt 359363 171 + 796479 tattattattattgagacagagtcttgctctgtcacccaggctggagttcagtggcatgatctcggctcactgcaacctccgcctcccaggttcaagcaattctccttgtctcagcctcctgagtagctgggactacaggcgcccaccaccacgcctggctaacttttgta s panTro4.chr19 59304407 171 + 63644993 tattattattattgagacagagtcttgctctgtcacccaggctggagttcagtggcatgatctcggctcactgcagcctctgtctcccaggttcaagcaattcttctcgtctcagcctcccaagtagctgggactacaggcgcccgccaccacgcctggctaatttttgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190143 171 + 60714840 tattattattattgaaacagagtcttgctctgtcacccaggctggagttcaatggcatgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctcatctcagcctcccgagtagttgggactacaggcgccctccaccacgcctggctaatttttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923272 170 - 106955855 tattattattCttgagacagagtcttgctctgtcacccaggctggagttcagtagcatgatctcggctcactgtaacctccgcctcccaggttcacaccattctcct-gcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaacttttgta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55287835 171 + 59248254 tattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatcgtggctcactgcaacctctgccttccgggtgccagcagttctccttgtctcagcctcccgagtagctgggattacaggctcctgccaccatgcctggctaatttttgta i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47377407 171 + 51301725 tattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatcttggctcactgcagcctccgcctcctgggtgccaGCAGTTctccttgtctcagcctcccgagtagctgggattacaggctcctgccaccacgcctggctaatttttgta i papAnu2.chr19 C 0 I 812 s chlSab2.chr6 47083374 168 + 50890351 tattattattattgagacagagtcttgctctgttacccaggctggagttcagtggcacaatctcggctcactgcaacctccgcctcccaggtgccagcagtt---cttgtctcagcctcctgagtagctgggattacaggctcctgccaccacgcctgactaatttttgta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45603975 171 + 49145316 tattataattattgagacggagtctcactctgtcactcaggctggagtacagtggtgcgatctcagcttgctgcaacctccgcctcccggattcaagaaattctccttgtttcagcctcccaagtagctgggattacaggtgcgtaccacgatgcctggctaatttttgta i calJac3.chr22 C 0 C 0 e rheMac3.chr19 60187195 688 + 64156825 M a score=160443.000000 s hg38.chr19_GL949753v2_alt 359534 68 + 796479 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgacctc--atgatccac s panTro4.chr19 59304578 70 + 63644993 tttttagtagagacgaggtttcaccatgttgacctggctgatctgcatctcctgacctcagatgatccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190314 70 + 60714840 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgatctcagatgatccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923442 70 - 106955855 tttttagtagagacgaggtttcaccatgttgaccaggctgatctgcatctcctgacctcagatgatccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55288007 70 + 59248254 tttttagtagagacgggatttcaccatgttgaccaggctgatctccatctcctgacctcagataatccac i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47378390 70 + 51301725 tttttagtagagacgggatttcaccatgttgaccaggctgatctccatctcctgacctcagataatccac i papAnu2.chr19 I 812 C 0 s chlSab2.chr6 47083542 70 + 50890351 tttttagtagagacgggatttcaccatgttgaccaggctggtctccatctcctgacctcagatgatccac i chlSab2.chr6 C 0 I 317 s calJac3.chr22 45604146 70 + 49145316 tttttagtggagatggggtttcactatgttggccaggctggtcttgaactcctgacctcaggtgatccat i calJac3.chr22 C 0 C 0 e rheMac3.chr19 60187195 688 + 64156825 M a score=5902.000000 s hg38.chr19_GL949753v2_alt 359602 3 + 796479 cca s panTro4.chr19 59304648 3 + 63644993 ccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190384 3 + 60714840 ccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923512 3 - 106955855 ccg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55288077 3 + 59248254 ccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47378460 3 + 51301725 ctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47083929 3 + 50890351 ccg i chlSab2.chr6 I 317 C 0 s calJac3.chr22 45604216 3 + 49145316 ctg i calJac3.chr22 C 0 C 0 e rheMac3.chr19 60187195 688 + 64156825 M a score=153531.000000 s hg38.chr19_GL949753v2_alt 359605 54 + 796479 cctcggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT s panTro4.chr19 59304651 54 + 63644993 ccttggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190387 54 + 60714840 cctcagcctcccaaaatgctggaattacaggtgtgagccaccgcacccggccGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923515 54 - 106955855 cctcggcctcccaaaatgctggaattacaggcgtgagccaccgcacccggccGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187884 54 + 64156825 cctcggcctcccagaatgctgggattacaggcgtgagcccccgcacccagcTGG i rheMac3.chr19 M 688 C 0 s macFas5.chr19 55288080 54 + 59248254 cctcggcctcccagaaagctgggattacaggcatgagcccctgcacccggccGT i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47378463 54 + 51301725 cctcggcctcccagaaagctgggattacaggcatgagtccccgCACCCGGCCGt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47083932 54 + 50890351 cctcggcctcccagaatgctgggattacaggcgtgagcccccgcacccggccGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604219 54 + 49145316 cctcgacctcccacagtgttgggattacaggtgtgaaccaccgtgcctggACGT i calJac3.chr22 C 0 C 0 a score=71380.000000 s hg38.chr19_GL949753v2_alt 359659 25 + 796479 CCTTACCTATTATTGATA-TATCATT s panTro4.chr19 59304705 25 + 63644993 CCTTACCTATTATTGATA-TATCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190441 25 + 60714840 CCTTACCTATTATTGATA-TATCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923569 25 - 106955855 CCTTACCTATTATTGATA-TATCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187938 25 + 64156825 CCTTACCTATTATTGATA-TATCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288461 25 + 59248254 CCTTACCTATTATTGATA-TATCATT i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47378517 25 + 51301725 cctta-ctattattattattattatt i papAnu2.chr19 C 0 I 8257 s chlSab2.chr6 47083986 25 + 50890351 CCTTACCTATTATTGATA-TATCATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604273 25 + 49145316 CCTTACCTATTATTGATA-TGTCATT i calJac3.chr22 C 0 C 0 a score=10937.000000 s hg38.chr19_GL949753v2_alt 359684 5 + 796479 GTATT s panTro4.chr19 59304730 5 + 63644993 GTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190466 5 + 60714840 GTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923594 5 - 106955855 ATATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187963 5 + 64156825 ATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288486 5 + 59248254 ATATT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47084011 5 + 50890351 ATATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604298 5 + 49145316 ATAtt i calJac3.chr22 C 0 C 0 e papAnu2.chr19 47378542 8257 + 51301725 I a score=6139.000000 s hg38.chr19_GL949753v2_alt 359689 4 + 796479 TCTT s panTro4.chr19 59304735 4 + 63644993 TCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190471 4 + 60714840 TCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923599 4 - 106955855 TCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187968 4 + 64156825 TCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288491 4 + 59248254 TCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47386799 4 + 51301725 tcaa i papAnu2.chr19 I 8257 C 0 s chlSab2.chr6 47084016 4 + 50890351 TCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45604303 4 + 49145316 tctt i calJac3.chr22 C 0 N 0 a score=73911.000000 s hg38.chr19_GL949753v2_alt 359693 38 + 796479 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt s panTro4.chr19 59304739 38 + 63644993 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190475 38 + 60714840 AAAGAAAACAAGAAAAACcaagtgtggatagaccagtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923603 38 - 106955855 AAAGAAAACAAGAAAAACCAAGTGTGAATagaccagtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60187972 38 + 64156825 AAAGAAAACAAGAAAAACCAAGTGTGGATAGACCAGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55288495 38 + 59248254 AAAGAAAACAAGAAAAACCAAGTGTGGATAGACCAGTT i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47386803 17 + 51301725 aaaaaaaaaaaaaagaa--------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084020 38 + 50890351 AAAGAAAACAAGAAAAACCAAGTGTGGATagaccagtt i chlSab2.chr6 C 0 C 0 a score=4431.000000 s hg38.chr19_GL949753v2_alt 359731 2 + 796479 aa s panTro4.chr19 59304777 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190513 2 + 60714840 ag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923641 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60188010 2 + 64156825 AG i rheMac3.chr19 C 0 I 314 s macFas5.chr19 55288847 2 + 59248254 ag i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47386820 2 + 51301725 ag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084058 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 a score=1610651.000000 s hg38.chr19_GL949753v2_alt 359733 744 + 796479 aaagttcttgccttccag---------gacagtgatgatttgtttgcactggaattatcacagcaggaatttcagtaaatatgtggatttatgactgggaggtaggctcagaagaaatgctgatggaAGTTTGGCTTCCAGAAATATCTGACTAGGTTGTTTTAGACTAAACTTCTCACCGTTAATT----------------aaaaaaaaaaaaaaaaaaaaCTTTAggccaggcgcggtggctcacgcctgtaatcccatcaccttgggaggccgaggcaggcagatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccttctctactaaaaatacaaaaattagccaggcgtgttggtggg-----------ttcctgtagtcccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggtggagattgtagtgagccgagatcgcgccactgcactccagcctgggcaacagagtgagactccgtctc-aaaaacaaaaaaaaaacaaaaaaaacaacaacaactgt-aaaagatgaacaaaaaccaaagaacatctgtctgtagaacttggcatgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa s panTro4.chr19 59304779 750 + 63644993 aaagttcttgccttccag---------gacagtgatgatttgtttgcagaggaattatcacagcaggaatctcggtaaatatgtggatttatgactgggaggtaggctcagaagaaatgctgatggaAGTTTGGCTTCCAGAAATATCTGACTAGGTTGTTTTAGACTAAACTTCTCACCATTAATTaaaaa---------aaaaaaaaaaaaaaaaaaaaaaCTTTAggccaggcgcggtggctcacgcctgtaatcccatcaccttgggaggccgaggcaggcagatcatgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccttctctactaaaaatacaaaaattagccaggcgtgttggtggg-----------cgcctgtagtcccagctaccctggaggctgaggcagaagaatcgcttgaacccgggaggtggagattgtagtgagccgagatcgcgccactgcactccagcctgggcaacagagcgagactccgtctcgaaaaacaaaaacaaaaacaaaaaaaC--Caacaactgt-aaaagatgaacaaataccaaagaacacctgtctgtagaacttggcatgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56190515 747 + 60714840 aaagttcttgccttccag---------gacagtgatgatttgtttgcactggaattatcacagcaggaatttcggtaaatatgtggatttatgactgagaggtaggctcagaagaaatgctgatggaAATTTGgcttccagaaatatctgactaggtcgttttagactaaacctctcactgttaattaaaaacaaacaaacaaacaaacaaacaaacaaaaaacTTTAggccaggcactgtggctcacgcctgtaagcccatcacgttgggaggccgaggcaggcagatcacgaggtcaagagatcgagaccatcctggccaacgtggtgaaaccccgcctctactaagaatacaaaaattaaccaggtgtggtggcggg-----------cgcc-gtagtcccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgagcggagatcgcaccactgcactccagcctgggcgacaaagcgagactccgtctg--------------aaagcaaacagacaaaaaaaactgtaaaaagaggagcaaaaaccaaagaacatctgtctgtagaacttggcacgcttccaaggcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaacggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctgagtagGAGCAGGATGAAGAATTTCAacaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102923643 739 - 106955855 aaagttcttgccttccaggacagtgatgacagtgatgatttgtttggactggaattatcacagcaggaatttcagtaaatatgtggatttatgacggggaggtaggctcagaagaaatgctgatggaAGTTTGgcttccaaaaatatcggactaggtcgttttagactaaacttctcactgttaata--------------aaaaaaaaaaaacaaaaaaaacctttgggccaggcactgtggttcacgcctgtaatcccatcaccttgggagaccgaggcaggcagatcaggaggccaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcgtgttggtgcg-----------cacc------tccagctaccctggaggctgaggcaggagaatcgcttgaacccgggaggcggagattgtggtgagtggggatcgcgccactgcactccagcctgggtgacagagcaagattccatctc---------aaaaaaaaaaaaaaaaaaaaaaaaaactgtaaaaagatgaacaaaaaccacagaacatctgtctgtagaacttggcacgcttccaaggcagggagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagttttatgttaatggtttgctgattctgaaactaaaggcagcagatgagagaccaaaaagctg---agGAACAGGATGAAGAATTTCGACAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60188326 746 + 64156825 aaaGTTGTTGCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATTTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTCGCTGTTCATTTAAAAAAAA-----AACAAAAACAAAAAAACAAAAACTTTAGGCCTGTTGTTgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatggagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctactcggaaggctgaggcaggagaatctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaaaaaagaaaaaaaaaaTTAaaaagatgaacaaaaaccgaagaacatctgtctgtagaacttggcacgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaagggactttatcctttgaggttagctttatgttaacggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i rheMac3.chr19 I 314 N 0 s macFas5.chr19 55288849 757 + 59248254 aaaGTTGTTGCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATTTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTCGCTGTTCATTTaaaaaaaa-----acaaaaaacaaaaaaacaaaaaCTTTAGGCCTGTTGTTgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatcgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggagggcacctgtagtccacctgtagtcccagctactcggaaggctgaggcaggagaatctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaaaaagaaaaaaaaaatttaaaaaGAtgaacaaaaaccgaagaacatctgtctgtagaacttggcacgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaagggactttatcctttgaggttagctttatgttaacggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47386822 732 + 51301725 aaagttgttgCCTTCCAG---------GACAGTGATGATTTGCTTGGACTGGAATTATCACAGCAGGAATTTCAGTAAATATGTGGATCTATGCCTGGGAGGTAGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCGTTTTAGAATAAACTTCTcactgttcatttaaaaa-----------aaaaaaaaaaaaaaaaaaactttaggccTGTTGttgtggcttgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagatcgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctactcggaacgctgaggcaggagaatctcttgaacctgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaaaaaaa----gaaaaaaaaatttaaaaagatgaacaaaaactGAAGAACATCTGTCTGTAGAACTTGGCACGCTTCCAAGTCAGAGAGACTTTAGGGTTCCAAGACATAAAAGAGGAAGGAAACCAAGCAAAGGGACTTTATCCTTTGAGGTTAGCTTTATGTTAACGGTTTGCTGATTCTGAAACGAAAGGCAGCAGAT----GACCAAAAAGCTGAGTGGGAGCAGGATAAAGAATTTCAACAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084060 724 + 50890351 aaagttcttgccttccag---------gacagtgatgatttgcttggactggaattatcacagcaggaagtTCAGTAAATATGTGGATTTATGCCTGGG----AGGTTCAGAAGAAACACTGATGGAAGTTTGGCTTCCAGAAATATCTGACTAGGTCATTTTAGAATAAACTTCTCACTGTTCATTAAAGAA--------------------AAAAAACAAACTTTAAGCCAGTTGTTgtggctcgcgcctgtaatcccagtacctggggaggccaaggtgggcagatcacgaggtcaagagattgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggaggg-----------cacctgtagtcccagctacttagaaggctgaggcaggagaacctcttgaacccgggaggtggaatttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagaacgagactctgtctc-----------aaaaaagaaaaa---gaaaaaaaaaTTTTaaaagatgaacaaaaaccaaagaacatctgtctgtagcacttggcatgcttccaagtcagagagaatttagggttccaagacataaaagaggaaggaaaccaagcaaggggactttatcctttgaggttagctttatgttaatggtttgctgattctgaaacgaaaggcagcagatgagagaccaaaaagctgagTGGGAGcaggataaagaatttcaacaaa i chlSab2.chr6 C 0 C 0 a score=479514.000000 s hg38.chr19_GL949753v2_alt 360477 313 + 796479 gaactagcaaatataagaacaaacacagccggacgcggtggctcacacctgtaatcccaatactttgggaggccaaggcgggtggatcacctgagcttgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggactcagtggcgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaacccaggaggcggaggttgcagtgaaccgagatggtgccactacactccagcctgggtgacagagtgagattccatctc-----aaaaaa s panTro4.chr19 59305529 312 + 63644993 gaactagcaaatataagaacaaacacagctggacacggtggctcacacctgtaatcccagtactttgggaggccaaggagggtggatcacctgagcttgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggactcagtggtacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgaactgagatggtgccactgcactccagcg-gggcaacagagtgagattccgtctc-----aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191262 313 + 60714840 gaactagcaaatataagaacaaacacggccggatgcggtggctcacacctgtaatcccagcactttcagaggccaaggcgggcggatcacctgaggtcgggggtttgagatcagcctgaccaacagggagaaaccccatctctactaaaaatacaaaattagccggacgcagtggctcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcgtagattgcagtgagccgagatggtgccactgcactccagcctgggcaacagagtgagattccatctc-----aaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924382 277 - 106955855 GAACTAGCAAATATAAGAAca----------ggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcccctgaggtcgggggtttgagatcagcctgaccaacagggagaaaccccatctccactaaaaatacaaaaTTAgccggacgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggggtttgagat-------------------------------cagcctgaccaacagggagaaaccccatctccactaaaaata i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55289606 313 + 59248254 gaactagcaaatataagaacaaacacagccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccggagggggcggatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccccgtctctactaaaactacaaaattagccggacacagtggctcatgcccgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactccagcccgggcaacagagcaagactccatctc-----aaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47387554 313 + 51301725 GAACTAGCAAATATAAGAACAAacacggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccggagggggcgtatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccctgtctctactaaaaatacaaaattagccggacacagtggctcatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccgggaggcggaggttgcaatgagccgagatcgcaccattgcactccagcccgggcaacagagcaagactccatctc-----agaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47084784 301 + 50890351 gaactagcaaatataagaacaaacacggctgggcgtg------------tataatcccagcactttgggaggctggagggggcggatcacctgaggtggggggtttgagaccagcctgaccaacagggagaaaccccatctctacttaaaatacaaaattagccggacacagtgactcatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagccgagatcacaccattgcactccagcccgggcaacagagcaagactccatctc-----aaaaaa i chlSab2.chr6 C 0 N 0 a score=527.000000 s hg38.chr19_GL949753v2_alt 360790 5 + 796479 -gaaaa s panTro4.chr19 59305841 5 + 63644993 -gaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191575 5 + 60714840 -gaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 102924659 5 - 106955855 -caaaa i nomLeu3.chr10 C 0 n 0 s macFas5.chr19 55289919 5 + 59248254 acaaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47387867 5 + 51301725 acaaa- i papAnu2.chr19 C 0 C 0 a score=2025.000000 s hg38.chr19_GL949753v2_alt 360795 3 + 796479 aga s panTro4.chr19 59305846 3 + 63644993 aga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56191580 3 + 60714840 aga i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55289924 3 + 59248254 aaa i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47387872 3 + 51301725 aaa i papAnu2.chr19 C 0 n 0 e nomLeu3.chr10 102924664 0 - 106955855 I a score=69621.000000 s hg38.chr19_GL949753v2_alt 360798 280 + 796479 aaaaaaaagaaaatacgggacatggtgaaaatacttaacatatgtacaactggaatcccataaggggaagaaagacagagaaagagaa--aggcagacacgatattggaagggttactgaacaatatttcctaaaatgaatcaaaaacatcaagccacaCAGtagatgtccagtaggaacttaaacctcacgtgtttataacatgttataatataagttgcttatattcactcccaaatctcctcctcctaaggtctttcccatctcagtaaatgagaattc s panTro4.chr19 59305849 282 + 63644993 aaaaaaaagaaaatacgggacgtggtgaaaacacttaacataggtacaactggaatcccataagggaaagaaagacagagaaagagaatgaggcagacacaatattggaagggttactgaacaatatttcctaaaatgaatcaaaaacatcaagccacaCAGtagatgtccagtaggaacttaaacctcacatgtttataacatgttataatataagtttcttatattcactcccaaatctgctcctcctaaggtctttcccatctcagtaaatgagaattc i panTro4.chr19 C 0 N 0 s ponAbe2.chr19 56191583 271 + 60714840 caaaaaacgaaaatatgggacgtagtgaaaacgcttaacataggtacaactggaatcccataaggggaagaaagacagagaaagagaatgaggcagacacaatattggaagggttactgaacaatatttcccaaaatgaatcaaaaacatcaagccacaCAGtagacgtccagtaggaacttaaacctaacatgtttataac-----------taagtttcttatattcactcccaaatctgctcctcctaaggtcttccccatctcagtaaatgagaattc i ponAbe2.chr19 C 0 N 0 e nomLeu3.chr10 102924664 0 - 106955855 I e papAnu2.chr19 47387875 0 + 51301725 I e macFas5.chr19 55289927 0 + 59248254 I a score=0.000000 s hg38.chr19_GL949753v2_alt 361078 2000 + 796479 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN e nomLeu3.chr10 102924664 0 - 106955855 I e papAnu2.chr19 47387875 0 + 51301725 I e macFas5.chr19 55289927 0 + 59248254 I a score=3600.000000 s hg38.chr19_GL949753v2_alt 363078 1 + 796479 G s panTro4.chr19 59552405 1 + 63644993 G i panTro4.chr19 N 0 C 0 s ponAbe2.chr19 56459842 1 + 60714840 G i ponAbe2.chr19 N 0 C 0 s nomLeu3.chr10 103166347 1 - 106955855 G i nomLeu3.chr10 n 0 C 0 s rheMac3.chr19 60434133 1 + 64156825 G i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55541615 1 + 59248254 G i macFas5.chr19 n 0 C 0 s papAnu2.chr19 47624518 1 + 51301725 G i papAnu2.chr19 n 0 C 0 s chlSab2.chr6 47305676 1 + 50890351 G i chlSab2.chr6 N 0 C 0 s canFam3.chr1 19897174 1 - 122678785 G i canFam3.chr1 N 0 C 0 a score=1951665.000000 s hg38.chr19_GL949753v2_alt 363079 655 + 796479 AATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGTGAGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACC-CCCACCACGTTCCTTCCCTCTCACTCT---CCCCCGCTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACGCAGACCCCACAC------------TCCATGGAG----------------TCTGGAATGCATGGGAGCTGCCCCCCCAGTGGACACCATTGGACCCCACCCAGCCTGGATCT----------ACCCCA---GGAGACTCTGGGAACTTTTAGGGGTCACTCAA-TTCTGCAGTATaaataactaatgtctctacaattttgaaa-taaagcaacagacttctcaataatcaatgaagtagctgagaaaact-------aagtcagaaagtgcattaaactgaatcacaatgt-aaatattacacatcaagcgatgaaactggaaaactacaagccacgaatgaatgaattaggaaa--gaaaaaaagt--aggaaatgaatgatcttggctttcctataagaaattta--------------------------------------------------------------gggcagg s panTro4.chr19 59552406 653 + 63644993 AATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGTGAGTCCTTTCCTCTCCAGACCCCCAGGCCTCCCCCACC-CCCACCACGTTCCTTCCCTCTCACTCT---CCCCC-CTGCAGCCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTATGCCCAGCTGAACAGCTTGACCCTCAGATGGGAGGCAATTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCGGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACGCAGACCCCACAC------------TCCACGGAG----------------TCTGGAATGCATGGGAGCTGCCCCCC-AGTGGACACCATTGGACCCCAGCCAGCCTGGATCT----------ACCCCA---GGAGACTCTGGGAACTTTTAGGGGTCACTCAA-TTCTGCAGTATaaataactaatatctctacaattttgaaa-taaagcaacagacttctcaataatcaatgaagtagctgagaaaact-------aagtcagaaagtgcattaaactgaatcacaatgt-aaatattacacatcaaacgatgaaattggaaaactacaagccacgaatgaatgaattagaaaa--gaaaaaaagt--aggaaatgaatgatcttggctttcctataagaaattta--------------------------------------------------------------gggcagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56459843 655 + 60714840 AATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGGCAGATGGACACTGAGGTGGGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCGACC-CCCACCACGTTCCTTCCCTCTCACTCT---CCCCCACTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAACGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCA-GGGGGCACCCAGACTCCACAC------------TCCATGGAG----------------TCTGGAATGCATGGGAGCTGCCCCC--AGTGGACACCATTGAACCCCAGTCAGCCTGGATCT----------ATGCCA---GGAGACTCTGGGAACTTTTAGGGGTCACTCAA-TTCTGCAGTATaaataactaatatgtctacatttttgaaa-taaagcaacagacttctcaataatcaatgaagtagctgaggaaactaa-----aagtcagaaagtgcattaaactgaatcacaatgt-aaatattacacatcaaacgatgaaattggaaaactacaagccacaaatgaatgaattagaaaag-gaaaaaaagt--aggaaatgaatgaccttggctttcctacaagagattta--------------------------------------------------------------gggccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103166348 652 - 106955855 AATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGGCAGATGGACACTGAGGTGAGTGCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACC-CCCATCACGTTCCTTCCCTCTCACTCT---CCCCCACTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGATGGAAGGCAACTGAGCCTCCTCAATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTATGCCACGCTGGCCATCCACTAATCCA-GGGGGGACCCAGACTCCACAC------------TCCATGGAG----------------TCTGGAATGCATGGGAGCTGCCCCC--AGTGGACACCATTGGACCCCAGCCAGCCTGGATCT----------ACGCCA---GGAGACTCTGGGAACTTTTAGGCATCACTCAA-TTCTGCAGTATaaataactaatatctctacatttttgaaa-taaagcaacagacttctcaataatcaatgaagtagctgagaaaact-------aagtcagaaagtgcattaaactgaatcacaatgt-aaatattacacatcaaacgatgaaattggaaaactacaagccacgaatgaatgaattagaaaa--gaaaaaaagt--aggaaatgaatgatcttggctttcctataagagattta--------------------------------------------------------------gggccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60434134 644 + 64156825 AATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGCTG------------AGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACC-CCCACCACGTTCCTTCCCTCTCACTCT---CCCCCACTACAGGCTGCTGCATCTGAAGACCCCCAGGATGTGACCTACGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGACAACTGAGCCTCCTCCATCCCAGGAAAGGGCGCCTCCAGTTGAGTCCAGCATCTACGCCACCCTGACCATCCACTAACCTG-GAGGGGACCCAGACCCCACAT------------TCCAGGGAG----------------TCTGGGACGCATGGGAGTTGCCCCC--AGTGGACACCATTGAACCCCAGCCAGCCTGGACCG----------ACACCA---GGAGATGCTGGGAACTTTTAGGGGTCACTCAG-TTCTGCAGTATaaataactaacatctatacatttttgaaa-taaagcaacagacttttcaataatcattgacgtcactgagaaaactaa-----aagtcagaaagtgcattgaactgaatcacaatgt-aaatattacacatcaaacgatgaaactggaaaactacaagccacgaatgaatgaattagaaaagaaaaaaaaagt--aggaaatgaaggatcttggttttcctattagaaagtta--------------------------------------------------------------gggccgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55541616 656 + 59248254 AATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACC-CCCACCATGTTCCTTCCCTCTCACTCT---CCCCCACTGCAGGCTGCTGCATCTGAAGACCCCCAGGATGTGACCTACGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGCGCCTCCAGTTGAGTCCAGCATCTACGCCACCCTGACCATCCACTAGCCCA-GAGGGGACCCAGACCCCACAT------------TCCAGGGAG----------------TCTGGGACGCATGGGAGTTGCCCCC--AGTGGACACCATTGAACCCCAGCCAGCCTGGACCG----------ACACCA---GGAGATGCTGGGAACTTTTAGGGGTCACTCAG-TTCTGCAGTATaaataactaacatctatacatttttgaaa-taaagcaacagacttttcaataatcattgacgtcactgagaaaactaa-----aagtcagaaagtgcattgaactgaatcacaatgt-aaatattacacatcaaacgatgaaactggaaaactacaagccacgaatgaatgaattagaaaagaaaaaaaaagt--aggaaatgaatgatcttggttttcctattagaaagtta--------------------------------------------------------------gggccgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47624519 655 + 51301725 AATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCCGATGGACACTCAGGCTGGTCCTTtcccctccaggcccccagccctcccccacc-cccatcacgttccttccctctcactct---cccccacTGCAGGCTGCTGCATCTGAAGACCCCCAGGATGTGACCTACGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGTGCCTCCAGTTGAGTCCAGCATCTACGCCACCCTGACCATCCACTAGCCCA-GAGGGGACCTAGACCCCACAT------------TCCAGGGAG----------------TCTGGAACGCATGGGAGTTGCCCCT--AGTGGACACCATTGAACCCCAGTCAGCCTGGACCT----------ACACCA---GGAGACGCTGGGAACTTTTAGGGGTCACTCAG-TTCTGCAGTATAAATAACTAACATctatacatttttgaaa-taaagcaACAGACTTTTCAATAATCATTGACGTCACTGAGAAAACTAA-----AAGTCAGAAAGTGCGTTGAACTGAATCACAATGT-AAATATTACACATCAAACGATGAAACTGGAAAACTATGAGCCACGAATGaatgaattagaaaag-aaaaaaaagt--aggaaatgaATGATCTTGGTTTTCCTATTAGAAattca--------------------------------------------------------------gggccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47305677 602 + 50890351 AATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGATGGACACTCAGGTGAG----------------------------------------------TCCTTCCCTCTCACTCT---CCCCCACTGCAGGCTGCTGCATCTGAAGACCCCCAGGATGTGACCTACGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGCGCCTCCAGTTGAGTCCAGCATCTACGCCACCCTGACCATCCACTAGCCCA-GAGGGGACCCAGACCCCACAT------------TCCAGGGAG----------------TCTGGAACGCATGGGAGTTGCCCCC--AGTGGACACCATTGAACCCCAGCCAGCCTGGACCT----------ACACCA---GGAGACGCTGGAAACTTTTAGAGGTCACTCAG-TTCTGCAGTATAAATAACTAACATCTATACGTttttgaaa-taaagcaacagactcgtcaataa---------tcactgagaaaactaa-----aagtcagaaagtgcattgaactgaatcacaatgt-aaatattacacatcaaatgatgaaattggaaaactacaagccacgaatgaatgaattagaaaagaaaaaaaatgt--aggaaatgaatgatcatggttttcctattagaaattta--------------------------------------------------------------gggccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3605254 744 - 49145316 AATTCCTGGACACATAGCACAAACAGGCAGAAGAGGACAGGCAGATGGACAGTCAGGTAGATACTTTCCTCTCCAGGCCCCCAGGCCTCACCCACCTTCCAGCATGTTCCTTCCCTCTCACTCTCCGCCCCCACTGCAGGCTGCTGCATCTGAAACCCCCCAGGAAGTGACCTACGCCCAGCTGGACACCTTGACCCTCAGTCGGAAGGCAACTGAGCCCCCTTCATTCCAGGAAGGGGCCCCTCCAGCTGAGCCCAGTGTCTACTCCACTCTGGCCATCCACTAGCCTA-CGAAGGACCCAGACCCCACACAACGAAAGGAGACTCAGGGAC----------------TCCAGAAGGCACGTAAGCTGCCCCC--AGTGGACACCAATGAACCCCAGCCAGCCTGGACCCCTAACACAGACCACCA---GGACATTCTGGAGA-TGTTGGGACTCACTTGATTTCTGCAGTCTaaataactaatatctctacattttttagt-taaagcaacagacttctcaataattaatgagttaattgagaaaactaaaacagaagtcagaatgtgctttaaactt-gtcacaatat-aaatattacacacgaa---atgaaattggaagactaaaaaccacaaccgaataaagtagaagag-aaaaaaacct--aggaaatgaatgatcttggctttcaaatcaggaatttagaagaagaataaattattccaaatgaaggtgtaaggaagggaataataacaacaggagtttcgggccgg i calJac3.chr22 N 0 C 0 s canFam3.chr1 19897175 671 - 122678785 GATTACAGGACTCAGAGGACAGACAAGCAGAGGAAGATAGGTGGATGGACAGTCAGGTGGGCCCTGTCTTCTCTGATCACCCTGGCTTCCCCCCAC-CCCAACACCAACCTCCCCTCTCACTCT---CCCCTGCTGCAGGCTACTGCATCTGACGCCCCCCCAGATGTGACCTACGCTCAGCTGAACCACTTGACCCTCAGACAGAAGACAAGTGCATCCTCTCCCTCCCAGTCAGAGGAGCCCCCAGCAGAGCCCAGTGTGTATGCTGCTCTGGCCATTCACTAGCCCA-GAAAGGACCCAGACACCATAC------------TCCAGGGAGAGGGACCACACGGACCCTAGGAAGGCACAGGACCTGCCCAC--AGTGGGTGCTA------CCTGGTTG---TGGACTTCTCATAG---AGACCAGTTGGAACTCCTGGGGTCCTCTCAGAGTCACTCGA-TTCTTCCCTCAAA------GATACTCCCGCACtttggaaattaaagaaatggacttctcaataatccaggagtgaaatgagaaaaccaaaatggaaatgagagaatgt-ttacactgaaggattatgtaaaacgttacacataaaac-ctgaaa-tgggaaattaagaaccaagaacaaaatgtttaggaag--gaaaaagcctaaaaaaaatgaatgacatattctatcaaatcaagaattta--------------------------------------------------------------gagaaag i canFam3.chr1 C 0 I 6779 a score=1503942.000000 s hg38.chr19_GL949753v2_alt 363734 591 + 796479 gcacggtggctcacgcctgtaattccagcactttgggaggccgaggcgggcagatcacgagttcaggagatcgagaccatcttggccaacatggtgaaaccctgtctctcctaaaaatac-aaaaattagctggatgtggtggcag---tgcctgtaatcccagctatttgggaggctgaggcaggagaatcgcttgaaccagggagtc-agaggtttcagtgagccaagatcgcaccactgctctccagcct-ggcgac-agagggagactccatctcaaattaaaaaaaaaaaaaaaaaagaaagaaaa-----------agagaaaaaagaaattt---agaagaataacaagttattccaaatgaaggcgtaagaaaggg---aataataacaataataagaggagttgttcatgaggaaaaaccaaagcttgaaaattcaacaaagccagtgaagctcattcttgaaaacatgaatcacactcatgaattctaactacaatgaaaaagagaaagaaagagcaggcatgcatttccatatgggagtgagccagcagacagccctacagatcgtacacacgttttccaaaactaacaatggaacaggcggca s panTro4.chr19 59553059 593 + 63644993 gcgcgatggctcacgcctgtaattccagcactttgggaggccgaggcgggcagatcacgagttcaggagatcgagaccatcctggccaacatggtgaaaccctgtctctcctaaaaatac-aaaaattagctgggtgtggtggtgggcgtgcctgtaatcccagctatttggcaggctgagtcaggagaatcgcttgaaccagggagtc-agaggtttcagtgagccaagatcgcaccactactctccagcct-ggcgac-agagggagactccatctcaaattaaaaaaaaaaaaagaaa-gaaagaaaa-----------agagaaaaaagaaattt---agaagaataacaagttattccaaatgaaggcataagaaaggg---aataataacaataataagaggagttgttcatgaggaaaaaccaaagcttgaaaattcaacaaagccagtgaagctcattcttgaaaacatgaatcacactcatgaattctaactacaatgagcaagagaaagaaagagcaggcacgcatttccatatgggagtgagtcagcagacagccctacagatcctacacacattttcaaaaactaacaatggaacaggcggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56460498 589 + 60714840 gtgaggtgggtcacgcgtgtaattccatcactttgggaggccgaagcaggcagatcacgagttcaggagttcgagaccatcctggccaacatggtgaaaccctgtctctcctaaaaatac-aaaaattagcggggcatggtggtgggcgtgcctgtaatctcagctatttgggaggctgaggcaggagaatcgcttgaaccagggagtc-agaggtttcagtgagccaaaatcgcgtcactgctctccagcct-ggcgac-agagggagactccatctcaaattaaaaaaaaaaaga-----gaaagaaaa-----------agagaaaaaagaaattt---agaagaataacaagttattccaaatgaaggcgtaagaaaggg---aataataataataataagaggagttgttcatgaggaaaaaccaaagcttgaaaattcaacaaagccagtgaagctcattcttgaaaacattaattacactcatgaattctaactacaatgagcaagagaaagaaagagcaggcacgcatttccatatgggagtgaagaagcagacagccctgcagatcctacacatgttttcagaaactaacaatggaacaggcggca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103167000 586 - 106955855 gcgcggtgggtcacgcctgtaattccagcactttgggaggccgaggcaggcagatcacgagttcaggagattgagaccatcctggccaacatgatgaaaccctgtctctcctaaaaatac-aaaaattagctgggcatgttggtgggcgtgcccgtaatcccagctatttgggaggctgaggcgggagaatcgcttgaaccagggagtcaagagatttcagtgagccaagatcgcaccactgctctccagcct-ggcgac-agagggagactccacctcatattaaaaaaaaa---------aaaagaaaa-----------agagaaaaaagaaattt---agaagaataacaagttattgcaaatgaaggcgtaagaaaggg---aataataataatagtaagaggagttgttcatgaggaaaaaccaaagcttgaaaattcaacaaagccagtgaagctcattcttgaaaacatgaatcacactcatgaattctaactacaatgaggaagagaaagaaagagcaggcacgcgtttccatatgggagtgagccagcaggcagccctgcagatcccacacacattttcaaaaactaacaacggaacaggcggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60434778 604 + 64156825 gcacagtgagtcacgcctgtcattccagcactttgggaggccgaggtgggcagataacaaggtcagaagaccgagaccatcttgaccaacatggtgaaaccctgtctgtcctaaaaatac-aacaattagctgggtgtggtggtgggcgtgcctgtaatcccagctattcgggaggctgaggcaggagaatcgcttgaaccagggagtc-agaggttgcagtgagccgagatcacaccactgctctcctgccc--gcaac-agagggagacttc----caaaaaaaaaaaaaaaaaaaaaa-gaaaaaagaaatcaaaaag-aaaaagaaaagaaatctagaagaagaataacaaattattccaaatgcaggcgtaagaaagggaataataataataataataagaggagttgttaatgaggaaaaaccaaagcttgaaaattcaacaaagtcagtgaagctcattcttgaaaacattaattgcactcatgaatcctaactacaatgagcaagagaaagaaagagcaggcacgcatttccacacaggagtgagcgagcagacagccctagagatcccacatatgttttcaaaaactaacaacagaacaggcagca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55542272 606 + 59248254 gcacagtgagtcacgcctgtcattacagcactttgggaggccgaggcgggcagataacgaggtcagaagactgagaccatcttgaccaacatggtgaaaccctgtctgtcctaaaaatac-aacaattagctgggtgtggtggtgggcgtgcctgtaatcccagctattcgggaggctgaggcaggagaatcgcttgaaccagggagtc-agaggttgcagtgagctgagatcacaccactgctctcctgcct-ggcgac-agagggagactct----caaaaaaaaaaaaaaaaaagaaa-gaaaaaaGAAATCAAAACGAAAAAAGAAaagaaatctggaagaagaataacaaattattccaaatgaaggcgtaagaaagggaataataataataataataagaggagttgttcatgaggaaaaaccaaagcttgaaaattcaacaaagtcagtgaagctcattcttgaaaacattaattgcactcatgaatcctaactacaatgagcaagagaaagaaagagcaggcacgcatttccacacaggagtgagcgagcagacagccctagagatcccacatatgttttcaaaaactaacaacagaacaggcagca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47625174 582 + 51301725 gcacggtgagtCACGcttgtcattccagcactttgggaggctgaggcgggcagataacgaggtcagaagatcgagaccatcttgaccaacgtggtgaaaccctgtctgtcctaaaaatac-aaaacttagctgggtgtggtggtgggcgcgcctgtaatcccagctattcgggaggctgaggcaggagaatcacttgaaccagggagtc-agaggttgcagtgagccgagatcgcaccactgctctcctgcct-ggcgac-agagggagactccgtctcaaaaaaaaaaagaaaag--------------------------aaaaagaaaagaaatctagaagaagaataacaaattattccaaatgaaggcataagaaaggg---aataataataataataagaggagTTATTCATGAGGAAAAACCAAAGCTTGAAAATTCAACAAAGTCAGTGAAGCTCATTCTTGAAAACATTAATTGCACTCACGAATCCTAACTACaatgagcaagagaaagaaagagcaggcACGCATTTCCACACAGGAGTGAGCGAGCAGACAGCCCTAGAGATCCTACATATGTTTTCAGAAACTAACAACAGAACAGGCGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47306279 575 + 50890351 gcgcggtgagtcacgcctgacattccagcactttgggaggccgaggcgggcagataacgaggtcagaagactgagaccatcttgaccaacatggtgaaaccctgtctgtcctaaaaatac-aaaaattagctgggagtggtggcgggc--gcctgtagtcccagctattcgggaggctgaggcaggagaatcgcttgaaccagggagtc-agaggttgcagtgagccgagatcgcaccactgcactcctgcct-ggcgac-agaaggagaatctgtctccaaaaaaaaaaaaga----------------------------aaaaagaaaagaaatctagaagaagaataacaaattattccaaatgaaggcgtaagaaaggg------aataataataataagaggagtagttcatgaggaaaaaccaaagcttgaaaattcaacaaagccagtgaagctcattcttgaaaacattaattgcactcacgaatcctaactacaatgagcaagagaaagaaagagcaggcacgcatttccacacaggagtgagccagcagacagccctagagatcccacatatgttttcaaaaactaacaacagaacaggcgaca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3605998 479 - 49145316 gcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggctggtggatcacgaggtcaagagatcgagaccatcctggtcaacgtggtgaaaccccgtctctactaaaaatacaaaaaattagctggacatggtggcg--cgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggagac-ggaggttgcagtgagccgagatcatgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaaaaaataaata----------------------------------------------------------------------------------------------aacaa-------aataagaggagtttctcattaggaaaaaacaaaacttgaaaattcaacaaaggcagtgaagctcattgttgaaaacattaattacactcatgaatcctagctacaatgagcaagcaaaaggaag--------------------------------agcagacaGCCCTACAGATCCTACACACATTTTCAAAAACTAACAACAGAACGGGCTGCA i calJac3.chr22 C 0 I 669 e canFam3.chr1 19897846 6779 - 122678785 I a score=373867.000000 s hg38.chr19_GL949753v2_alt 364325 181 + 796479 aacctatgccaatatactagaaattgcagattaaatagatgaaatattctaaactggagtttacataatgaacataagagtaatcagagaatctgactcattttagatgtgtgtgtgtgtgtatatatatgtgtgtgtgtgtg-----aaaaacattgactataataaaaataatc-------------tcgagttcac s panTro4.chr19 59553652 190 + 63644993 aacctatgccaacatattagaaattgcagattaaatagatgaaatattctaaactggagtttacgtaatgaacataagagtaatcagagaatctgactcattttagatgtgtatgtgtgt----atatatgtgtgtgtgtgtg-----aaaaacattgattataataaaaatgatcccatggtataaactcgagttcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461087 190 + 60714840 aacctatgccaatatactagaaattgcagattaaatagatgaaatattctaaactggagtttacataatgaacataagagtaatcagagaatctgactcattttaggggtgtgtgtgtgt----gtgtgtgtgtgtgtgtgtg-----aaaaacattgactgtaataaaaatgatcccatggtataaactggagttcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103167586 176 - 106955855 aacctatgccaatatactagaaattgcagattaaacagatgaaatattccaaactggagtttgtgtaatgaacataagagtaatcagagaatctgactcatttcaggtgtgtgtgtgtgt------------------gtgtg-----acaaacactgactgtaataaaaatgttcccatggtataaactcgagttcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60435382 188 + 64156825 aacctatgccaatataccagaaaatgcagattaaatagatgaagtattgcaaactggagttcacgtaatgaacataagagtcatcagagaatctgacccattttagatgtgtgtgtttgt--gtgtgtgtgtgtgtgtgtgtg-----aaaaac----actgcaacaaaaatgttcccatggtataaactccagttcat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55542878 188 + 59248254 aacctatgccaatataccagaaaatgcagattaaatagatgaagtattgcaaactggagtttacgtaatgaacataagagtaatcagagaatctgaCCCATTTTAGAtgtgtgtgtttat--gtgtgtgtgtgtgtgtgtgAG-----AAAAAC----ACTGCAATAAAAATGTTCCCATGGTATAAACTCCAGTTCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47625756 193 + 51301725 AACCTATGCCAATACACCAGAAAATGCAGATTAAATAGATGAAGTATTGCAAACTGGAGTTTACGTAATGAACGTAAGAGTAATCAGAGAATCTGACCCATTTtagatgtgtgtgtttat--gtgtgtgtatatatatgtgtgtgtgtgaaaac----acTGTAATAAAAATGTTCCCATGGTATAAACTCCAGTTCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47306854 178 + 50890351 aacctatgccaatatactagaaaatgcagattaaatagatgaagtattgcaaactggagtttacgtaatgaacataagagtaatcagagaatctgacccattttagatg----------t--gtgtgtgtgtgtgtgtgtgtg-----aaaaac----actgcaataaaaatgttcccatggtataaactccagttcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e calJac3.chr22 3606477 669 - 49145316 I a score=650916.000000 s hg38.chr19_GL949753v2_alt 364506 256 + 796479 gaagcttcattggtgatttcttacaaatattgacacactaatgaaacacacaaacacacccagagcatcacaaatgtttcttgagaatagaaaaagtggcaaTGTGCccaggtgcggtggctcacgcctgtaatctcaacacatagggtggcagaggc-ggcagattacttgaggctgggagttcaagaccagcctggccaacacggcaaaaccccatctctact-aaaaa-tacaaaaattagtcagacatggtggcg s panTro4.chr19 59553842 255 + 63644993 gaagcttcattggtgatttcttacaaatactgacacactaatgaaacacacaaacacacccagagcatcacaaatgtttcttgagaatagaaaaa-TGGCAATGTGCccgggtgcggtggctcacgcttgtaatctcaacacatagggtggcagaggc-ggcagattacttgaggctgggagttcaagaccagcctggccaacacggcaaaaccccatctctact-aaaaa-tacaaaaattagtcggacgtggtggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461277 256 + 60714840 gaagcttcattggtgatttcttacaaatattgacacactaacgaaacacacaaacacacccagagcatcacaaatgtttcttgagaatagaaaaagtggcaaTGTGCccgggtgcggtggctcacgattgtaatctcaacacatagggaggcagaggc-agcagattacttgaggctgggagttcaagaccagcctggccaacacggcaaaaccccatctctact-aaaaa-tacaaaaattagtcagacgtggtggcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103167762 256 - 106955855 gaagcttcactggtgatttcttacaaatattaacacacgaatgaaacacacaaacatacccagagcatcagaaatgtttcttgagaatagaaaaagtggcaaTGTGCccgggtgcggtggctcacgcttgtaatctcaacacatagggaggcagaggc-ggcagatcacttgaggctgggagttcaagaccagcctggccaacacggcaaaaccccatctctact-aaaaa-tacaaaaattagtctgatatggtggcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60435570 252 + 64156825 gaagcttcattggtgatttcttacaaatactgacacactaatgaaa--cacaaacacacccagagcatcacaaaggtttcttgagaatagaaaaagaggcaaTGTGCccaggtgcggtggctcacacctgtaatctcaacacattgggaggcagaagt-ggcagattacttgaggccgggagttcgagaccagcctgtccaacatggcaaa--agcaactctact-aaaaa-aaaaaaaattagctggacgtggtggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55543066 253 + 59248254 CAAGCTTCATTGGTGATTTCTTACAAATACTGACACACTAATGAAA--CACAAACACACCCAGAGCATCACAAAGGTTTCTTGAGAATAGAAAAAGAGGCAATGTGCCCACgtgcggtggcacacacctgtaatctcaacacattgggaggcagaagt-ggcagattacttgaggccgggagttcgagaccagcctgtccaacatggcaaa--cacatctctactaaaaaa-aaaaaaaattagctggacgtggtggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47625949 247 + 51301725 GAAGCTTCATTGGTGATTTCTTACGCATACTGACACACTAATGAAATGCACAAACACACCCAGAGCGTCACAAATGTTTCTTGAGAATagaaaaaag----------ccgggcgcggtggctcaagcctgtaatctcagcactttgggaggctgagacgggcggatcac--aaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatacaaaaaactagccgggcgaggtggcg i papAnu2.chr19 C 0 M 723 s chlSab2.chr6 47307032 251 + 50890351 gaagcttcactggtgatttcttacaaatactgacacactaatgaaa--cacaaacacacccagagtgtcacaaatgtttcttgagaatagaaaaagaggcaaTGTGCccaggtgcggtggctcacacctgtaatctcaacacattgggaggcagaagt-ggcagattacttgaggccgggagttcgagaccagcctgtccaacatagcgaa--cccatctctactaaaaaa---aaaacattagctggacatggtggcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3607146 245 - 49145316 GAAGCTTCATCAGTGATTTCTTATAAATATTGACACACGAATGAAACACACAGACATACTCAGAGCATCACAAATGTTTCTTGAGAATAGAAAAGGAGGCAAT--------gtgcagttgctcacgtctgtaatccccacattttgggaggcagaggc-ggcagattactggaggccaggagttcaagaccagcctggccaagatggcaa---cccgtctctact-aaaaa-tacaaaaattaggcagacgtggtggtg i calJac3.chr22 I 669 C 0 e canFam3.chr1 19897846 6779 - 122678785 I a score=336417.000000 s hg38.chr19_GL949753v2_alt 364762 154 + 796479 cacactgcagtcccagctacttgggaggcagaggcaggagaatcacttgatcccaggagatggaggctgcagtgagctgagatcccgcccctgcgctccagcctggtcaacagagccagactctgtctcaaaaaatt-----aaaaaaaaaaaaaaGTC s panTro4.chr19 59554097 154 + 63644993 cacactgcagtcccagctacttgggaggcagaggcaggagaatcacttgatcccaggagatggaggctgcagtgagctgagatcccgcccctgcactccagcctggtcaacagagccagactctgtctcaaaaaatt-----taaaaaaaaaaaaaGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461533 153 + 60714840 cacactgcagtcccagctacttgggaggcagaggcaggagaatcacttgatcccaggaggtggaggctgcagtgagctgagatcccacccctgcactccagcctggtcaacagagccagactctgtctcaaaaaatt------aaaaaaaaaaaaaGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103168018 151 - 106955855 cacgctgcagtcccagctacttgggaggcagaggcaggagaatcacttgatcccaggaggtggaggctgcagtgagctgagatcccgcccctgcactccagcctggtcaacagagccagactctgtctcaaaaaatt--------aaaaaaaaaaaGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60435822 157 + 64156825 cacgctacaatctcagttactggggaagcagacgcaggagaatcatttgatcccgggaggtggaggttgcagtgagctgagatcacacccctgcactccagcctgggcaatagagccagactctgtctcaaaaaatt--aaaaaaaaaaaaaaaaaGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55543319 159 + 59248254 cacgctacaatcccagttactggggaagcagacgcaggagaatcatttgatcccgggaggtggaggttgcagtgagctgagatcacacccctgcactccagcctgggcaacagagccagactctgtctcaaaaaattaaaaaaaaaaaaaaaaaaaGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47307283 154 + 50890351 cacgctacaatcccagctcctggggaagcagaggcaggagaatcagttgatcccgggaggtggaggttgcagtgagctgagatcacgcccctgcactccagcctaggcaacagagctagactctgtctcaaaaaatt-----aaaaaaaaaaaaaaGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3607391 152 - 49145316 cacgctgcaatcccagctacttgggaggcagaggcaggagaatcacttgcacccaggagatggaggttgcagtgagctgagattgtg-ctctgcactgcagcctgggtgacacagacaaactctgtctcaaaaaatt------ttcaaaaaaagaaGTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e papAnu2.chr19 47626196 723 + 51301725 M a score=331009.000000 s hg38.chr19_GL949753v2_alt 364916 148 + 796479 ATGACA-TATAAAATAGAATTTTCCATTCTATAACAGGCATATTTTAAACTCTACAG-TTTTTCTGTTTCAAAATAATATTTTTTT-AAATTTTATTTTAATGTTTTACtttatttta-tttggcagtttaaaattctacatatttaggatg s panTro4.chr19 59554251 149 + 63644993 ATGACA-TATAAAATAGAATTTTCCATTCTATAACAGGCATATTTTAAACTCTACAG-TTTTTCTGTTTCaaaataatattttttttaaattttattttaatGTTTTACtttatttta-tttggcagtttaaaattctacatatttagggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461686 148 + 60714840 ATCACA-TATAAAATAGAATTTTCCATTCTATAAAAGGCATGTTTTAAACTCTACAG-TTTTTCTGTTTCaaaataatattttttt-aaattttattttaatGTTTTACtttatttta-tttggcaatttaaaattctacatatttagggtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103168169 143 - 106955855 ATCACA-TATAAAATAGAATTTTCCATTCTATAACAGGCATGTTTTAAACTCTACAG-TTTTTCTGTTTCAAAATAATATTTTTTT-TAATTTTGTTTTAATGt-----tttatttta-tttggcaatttaaaattctacatatttagggtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60435979 147 + 64156825 ATCACA-TATAGAATGGAATTTTCCATTCTATAAAAGGCATGTTTTAAA--CTACGGTTTTTTTTGTTTCaaaataataattattt--tattttaCTTTAATGTTTTACTTTAtttttttttggcaatttaaagttctacatacttagggtg i rheMac3.chr19 C 0 I 20 s macFas5.chr19 55543478 128 + 59248254 ATCACA-TATAGAATGGAATTTTCCATTCTATAAAAGGCATGTTTTAAA--CTACGGTTTTTTTTGTTTCAAAATAATAATTTTTT--TAttttacttta-------------------tttggcaatttaaaattctacatacttagggtg i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47626928 144 + 51301725 aTCACA-TATAGAATGGAATTTTCCATTCTATAAAAGGCATGttttaaa--ctatgg-tttttttgtctcagaataataatt-ttt--tattttactttaatgttttactttatttta-tttggcaatttaAAATTCTACATACTTAgggtg i papAnu2.chr19 M 723 I 6 s chlSab2.chr6 47307437 144 + 50890351 ATCACATTATAGAATGGAATTTTCCATTCTATAAAAGGCATGTTTTAAA--CTATGTTTTTTTTTGTTTCAG---AATGATTTTTT--TATTTTACTTTAATGTTTTACtttatttta-tttggcaatttaaaattctacatacttcgggtg i chlSab2.chr6 C 0 I 20 s calJac3.chr22 3607543 130 - 49145316 ATCACA-TATAAAATTGAATTTTCCATCATATAAAAGGTATGTTTTAAAATATACAG-----TTTGTTTCaaaataatatttttat----------tttaatGttttacttta------tttggcaataaaaaattctacatgttcagggtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I a score=7575.000000 s hg38.chr19_GL949753v2_alt 365064 7 + 796479 tgcaaca s panTro4.chr19 59554400 7 + 63644993 tgcaaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461834 7 + 60714840 tgaaaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103168312 7 - 106955855 tgcaaca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55543612 7 + 59248254 tttaata i macFas5.chr19 I 6 I 7 s papAnu2.chr19 47627078 7 + 51301725 tttaata i papAnu2.chr19 I 6 I 7 s calJac3.chr22 3607673 7 - 49145316 tacaaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e chlSab2.chr6 47307581 20 + 50890351 I e rheMac3.chr19 60436126 20 + 64156825 I a score=303859.000000 s hg38.chr19_GL949753v2_alt 365071 104 + 796479 tggtattttaata------tgcc-tgtgaaatcgctaggtcaagctaattaac--atctgtaacatcacgtagttatctttctgttaagagaacatttaaaatccactttctt s panTro4.chr19 59554407 105 + 63644993 tggtattttaata------tgccctgtgaaatcgctaggtcaagctaattaac--atctgtaacatcacgtagttatctttctgttaagagaacatttaaaatccactttctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461841 103 + 60714840 tgatattttaata------tatcctgtgaaatcgctaggtcaagctaattaac--atctgtaacgtcac--agttatctttctgttaagagaacatataaaatccactttctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103168319 105 - 106955855 tggtattttaata------taccctgtgaaatcgctaggtcaagctaattaac--atctgtaacatcacatagttatctctctgttaagaaaacatttaaaatctactttctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60436146 105 + 64156825 tgaaattttaata------tgccctgtgaaatcgctaggtcaagctaattaac--atctgtaacgtcacatagttacctttctgttaagagaacacttaaaatctactttctt i rheMac3.chr19 I 20 I 2435 s macFas5.chr19 55543626 105 + 59248254 tgaaattttaata------tcccctgtgaaatcgctaggtcaagctaattaac--atctgtaacatcacatagttacctttctgttaagagaacatttaaaatctactttctt i macFas5.chr19 I 7 C 0 s papAnu2.chr19 47627092 105 + 51301725 TGAAATTTTAATA------TGCCCTGTGAAATCACTaggtcaagctaattaac--atctGTAACATCACATAGTTACCTTTCTGttaagagaacatttaaaatctactttctt i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47307601 105 + 50890351 tgaaattttaata------tgccctgtgaaatcgctaggtcaagctaattaac--atctgtaacatcacatagttacctttctgttaagagaacatttaaaatctactttctt i chlSab2.chr6 I 20 C 0 s calJac3.chr22 3607680 113 - 49145316 tgatattttaatacctgagtaccctgtgcagtccctaggtcaagctaattaacttatctgtaacgtcacatagttatctttttgttaagagaacatttaaaatctactttccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I a score=1324153.000000 s hg38.chr19_GL949753v2_alt 365175 636 + 796479 accaattttcgcgtatgcaatccattgttagcaactgtagtcaccatactgtacaacagatctcctaaacttactcctcctgtccaactgaagtgcggtatccttcgatgcagctctctgattccaccccagcc----cagctcccggggaccaccttctactctctacttccatgagttcaactggggcaatccgcacataagtgagatcaggcagcaggtgtcttcccgtgccttctttattccgcgtagcgtgacgtcctctaggctcgtccatgttgtcacaaatgaaacaatttccttcttctagaaggcggaatagtttttcgctgtgtttatactgagcgcttcattttctgtatccattcgcctgctgatggacgcttggccgggttccatgtcttggttatggtggctaaagctgtcatgaacatgggagggcgggcatctcttcaacgtactgattccatttcctttagatacacacccagcagtgaaattgttgaaacacagggtagctctgatcattaacttctgaaaaacatctatagtatttttgtggtcattgtactc--atttacattaccactagcggagggcagcggttctattttttctacattctcgctaacacttgttatt s panTro4.chr19 59554512 636 + 63644993 accaatttttgcatatgcaatccatttttagcaactgtagtcaccatattgtacaacggatctgccaaacttactcctcctgtctaactgaagtgcggtatccttcgatgcagctctctgattccaccccagcc----cagctcccggggaccaccttctactctctacttccatgagttcaactggggcaatccgtacataagtgagatcaggcagcaggtgtcttcccgtgccttctttattccacgtagcgtgatgtcctctaggctcgtccatgttgtcacaaatgaaacaatttccttcttctagaaggcagaatagtttttcgctgtgtttatactgagcgcttcattttctgtatccattcgcctgctgatggacgcttggccgggttccatgtcttggttatggtggctaaagctgtcatgaacatgggagggcgggcatctcttcaacgtactgattccatttcctttagatacacacccagcagtgaaattgttgaaacatagggtagctctgatcattaacttctgaaaaacatctgtagtatttttgtggtcattgtactc--atttacattaccactagcagagggcaggggttctattttttctacatcctcggcaacacttgttact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56461944 638 + 60714840 accaatttttgtgtatacaatccattgttagcaactgtaatcaccgtattgtacaacagatctgctaaacttactcctcctgtctaactgaaatgcagtatccttcgatgcagctctctgattccaccccagcc----cagctcccggggaccaccttctactctctgcttccatgagttcaactggggcaatccacacataagtgagatcaggcagcaggtgtcttcccgtgccttctttattccacatagcatgatgtcctctaggctcatccatgttgtcacaaatgaaacaatttccttcttctagaaggcggaatggtttttcgctgtgtatatactgagtgcttcactttctgtatccattcgcctgctgatggacacttggccgggttccatgtcttggttatggtggctaaagctgtcatgaacatgggagggcggacatctcttcaacgtactgatttcatttcctttagatacacacccagcggtgaaattgttgaaacatagggcggttctgatcgttaacttctgaaaatcatttatagtgtttttgtggtcattgcactcatatttacattaccactagcagagtgcaggggttctattttttctacattctcaccaacacttgttact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103168424 632 - 106955855 accaattttcgcgtatacaatccattgtcagcaactgtagtcaccgtattgtacaacagatccactacacttagtcctcctgtctaac--aaatgcggtatcctttgatgcagctctccgattccaccccagcc----cagctcccgggaaccaccttctactctctacttccatgagttgaactggggcaatccacacataagtgagatcaggcagcaggtgtcttccggtgccttctttattccacgtagcgtgatgtcctctaggctcatccatgttgtcataaatgaaacaatttccttcttctagaaggcggaatagtttttcgctgtgtatatactgagcacttcattttctgtatccattcgcctgctgatggacacttggccgggttccatgtcttggttatggtggctaaagctgtcatgaacatgggagggcgggcatctcttcaacgtactgattccatttcctttagatacacacccagcagtgaaattgttgaaacatagggtagctctgatcattaacttctgaaaaacatctgtagtattttt-tggtcattgtactc--atttatattaccactagcagagtgcag-ggttctgttttttctaccttcccaccaacacttgctact i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55543731 634 + 59248254 accaatgttcacatatacaatccattgtgagcaactgtagtcaccgtattgtacaacagatctgctaaactcactcctcctgtctaactgaaacgcggtatccttcgatgcagctctctgattccacccccgccccctcagctcccaggaaccaccttcga--ctctacttccatgagctgaactggggcaatccacacataagtgagatcaggcagcaggggtcttcctgtgtcttctttactccacatagcgtgatgtcctcgaggctcatcca---tgtcacaaatgaaacgatttccttcttctagaaggctgagtagtttttcgctgtggatactctgagcacttccttttctgtatccactcgcctgctggtggacacttgggcgggttccacgtcttggttatggtgactaaagctgtcatgaatatgggagggcgggcatctcttcaacgtactgatgtcgtttcctttagatacgcacccggcagtgaaattgttgcagcatagggcagttctgactgttaacttctgaaaaacatctatggtatttttgcggtcattgtactc--atttacattaccactagcagagtgcaagtattccattttttccacattctcg-caacacttgctact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47627197 636 + 51301725 accAATGTTCGGGTATACAATCCGTTGTGAGCAACTGTAGTCACCGTATTGTACAACAGATCTGCTAAACTCactcctcctgtctaactgaaacgcGGTATCCTTCGATGCAGCTCTCTGATTCCACCCCCACCCGCTCAGCTCCCAGGAACCACCTTCGACTCTCTAATTCCATGAGCTGAACTGGGGCAAtccacacataagtgagatcaGGCAGCAGGGGTCTTCCTGTGTCTTCTTTACTCCACCTGGCGTGATGTCCTGGAGGCTCATCCA---TGTCACAAATGAAACGATTTCCTTCTTCTAGAAGGCTGAGTAGTTTTTTGCTGTGGATACACtgagcatttctttttctgtatccaCTCGCCTGCTGGTGGACACTTGGGTGGGTTCTCTGTCTTGGTTATGGTGACTAAAGCTGTCATGAATATGGGAGGGCGGGCATCTCTTCAACGTACTGATGTCGTTTCCTTTAGATACGTACCCAGCAGGGAAATTGTTGCAACATAGGGCAGTTCTGATCGTTAACTTCTGaaaaacatctattttatttttgcagtcaTTGTACTC--ATTTACATTACCACTAGCAGAGTGCAAGTATTCcattttttccacattctca-cAACACTTGCTACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47307706 623 + 50890351 accagtgttcgcgtatacaatccgttgtgagcaactgtagtcaccgtattgtgcaacagatctgctaaactca---ctcctgcctaactgaaacgcggtatccttcgatgcagctctctgattccacccccgccccctcagctcccaaaaatcaccttcga--ctctacttccatgagctgaactggggcaatccacacgtaagtgagatcaggcagcagggttcttcctgtgcctcctttactccacgtagcgtgatgtcctcgaggctcatcca---tgtcacaaatgaaatgatttccttcttctagaaggctgagtagtttttcactgtggatacactgagcacttccttttctgtagccactcgcctgctggtggacacttgggcgggttccacgtcttggttatggtgactaaagctgtcatgaatat--------gggcgtctcttcaacgtactgatgtcgttttctttagatacatacccagcagggaaattgttgcaacatagggcagttctgatcgttaacttctgaaaaacatctattttatttttgcagtcattgtactc--atttacattaccactagcagagtgcaagtattccattttttccacattctca-caacacttgctact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3607793 627 - 49145316 accagttttcacatacacaatccattgttagtaactgtaatcaccgcattgcaacaaagat-tgctgaactcg---ctcctatgtaactgaaatgtggtctcctccaatacagctctctgattcca-cccagcc----cagctcccgggaaccgccttcca--caccacttccatgagttgtcctggtgcattccacacataagtgacatcatgcagtaggtgacttcctatgccttctttattccacctagcgtgatgtcccctaggctcaaccacgttgtcacaaatgaaacaatttccttcttctagaaggctgaattgttttttgctgtgtatatactgggcacttcattttctgtatccattcacctgctgagggacacttgggtgggttccatgtcttggttattgtggctgatgctatagtgagcatgggagtgtgggcatctctttgacgttctgatttcaattccttaaggtacacatccagcagtgacgttgttgaaacatacagcagttctaatcattaacttctgaaaaacatcta--gcatttttgtgatcattgtactc--acttacattaccactagcagagtgcaatggttctattttttccacattctcatcaacacttcttatt i calJac3.chr22 C 0 I 309 e canFam3.chr1 19897846 6779 - 122678785 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=1174496.000000 s hg38.chr19_GL949753v2_alt 365811 555 + 796479 ctactctttttcatagtaaccatcctaacagatgtgaggttatagcttcttaaagtttAtatgtatgtaagtatat--------gcctatatgtatatatgcaaatgtatgtattcatacataaacatccatac--------gtacatatgtgcagatacgtatgtacatatatatgc------atgtgtattgtatgtatatatgtatACACAGGTATACACATATATGTGTAGAAAGTGAAATTTTGcagtgagatatcacctcacagctgttagattgcctattatcagaatggtgaaagatcagtgttggtgagcatgaggagaa---aaaatccttacacaccattggtggacatgtaaattaacacagccattttagaaaacagtatggaagctcctcaaaaaactaaacatgccaccaccatataatccagcaagcccactgctgggtgtatacc-agaagaaatgaaatcggc-cacagaagagacgtccacactcctaagctcattgcagcactattcacaattgccaagttacaaaaacaaTTCTATATTTTTGAAAAAGGATTCATTTCTC s panTro4.chr19 59555148 563 + 63644993 ctactctttttcatagtaaccatcctaacagatgtgaggttatagcttcttaaagtttatatgtatgtaagtatat--------gcatatatgtatatatgcaaatgtatgtgttcatacataaacatccatacatacatatgtacatatgtgcagatacgtatgtacatatatatgc------atgagtattgtatgtatatatgtatatacatgtatacacatatatgtgtaAAAAGTGAAATTTTGcagtgagatatcacctcacagctgttagattgcctattatcagaatggtgaaagatcagtgttggtgagcatgaggagaa---aaaatccttacacaccattggtggatatgtaaattaacacagccattttagaaaacagtatggaagctcctcaaaaaactaaacgtgcagccaccatataatccagcaagcccactgctgggtgtatacccagaagaaatgaaattggc-cacagaagagacgtccacactcctaagctcattgcagcactattcacaattgccaagttacaaaaATA-TTCTATACTTTTGAAAAAGGATTCATTTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56462582 567 + 60714840 ctactctttttcatagtaaccatcctaacagatgtgaggttatagctccttaaagtttatatgtatgtaagtgtat--------gtgtatatgtatatatacaaatgtatgtattcatacataaacatccataagtacatatgtacgtatgtgcagatacgtatgtacttatatatgc------atgtgtattttatgtatatatgtatacacatatatgtacgtatatgtgtaGAAAGTGAAATTTTGcagtgagatatcacctcacagctgttagattgcctattatcagaatggtgaaagatcagtgctggtgaggatggggagaaaagaaaatccttacacaccgttggtggacatgcaaattaacacagccattttagaaaacagtatggaagctcctcaaaaaactaaacgtgcaaccaccatataatccagcaagcccactgctgggtgtatacccagaagaaacgaaatcggc-cacagaagagatgtccacactcctaagctcattgcagcactattcacaattgccaagttacaaaaATAATTCTATATTTTTGAAAAAGGATTCATTTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103169056 554 - 106955855 ctcctctttttcacagtaaccatcctaacagatgtgaggttatagctccttaaagtttatatgtatgtaagtgtat--------gcatata--tagatacacaaatgtatgtattcatatgtatacatctgtaCGTACATATGTACATATGTGC--ATACATGTGTACATATATATG---------------TGTATGTATATATGTACACACACGTATGCACATATATGTGTGAAAAGTGAAATTTTGcagtgagatatcacctcacagctgttagattgcctgttatcagaatggtgacacatcagtggtggtgagcatggggagaaaagaaaatccttacacaccattggtggacatgtaaattaacacagccattttagaaaacagtatgcaagctcctcaaaaaactaaacgtgcacccaccatataacccagcaagcccactgctgggtgtatacccagaagaaatgaaatcggc-cacagaagagacgtccatacttctaagctcatggcagcactattcacaattgccaagttaCACAAGCAGTTCTGTATTTTTGAAAAAGGATCCATTTCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55544365 563 + 59248254 ctattctttttcatagtaaccatcctaacagatgtgaggttatagcttcttgaagtttatatgtatgtaagtgtgt--------acatatatgtatatatacaaatttatgtattcatacatatacatccacacatacatatgtacatgtgtgcagatatgtatgtacatatatatgc------atg-----tgtatgtatatatgtatacatatgtataCACGTGTATGTGTAAAAAGTGAAATTTTGcagtgagctatcacttcacagctcttagattgcctattatcaaaatggtgaaagatcagtgttggtgagcatggggagaaaagaaaatccttacacaccattggtggatgtgtaaattaatgcagccattttagaaaacagtatggaagctcctcaaaaaactaaacatgcaaccaccgtataatccagcaagcccactgctgggtgtatacccagaggaaatgatattgacacacagaagagatgtccacactcctaagttcattgcagcactattcacaattgccaggTTTCACAAACAATTCTATATTTTTGAATAAGGTTTCGTTTctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47627833 563 + 51301725 CTACTCTTTTTCATAGTAACCATCCTAAGAGATGTGAGGTTATAGCTTCTTGAAGTTtgtatgtatgtaagtgtgt--------acatatatgtatatatacaaatatgtgtattcatacatatacatccacacatacatatgtacatatgtgcagatatgtatgtacatatatatgc------atg-----tgtatgtatatatgtatacatatgtatacacgtgtatgtgtaAAAAGTGAAATTTTGCAGTGTGCTATCACTTCACAGCTGTTAGATTGCCTATTATCAAAATGGTGAAAGATCAGTGTTGGTGAGcatggggagaaaagaaaatccttacACACCATTGGTGGAtgtgtaaattaatacagccattttagaaaacagtatggaagctcctcaaaaaactaaacgaGCAACCACCGTGTAATCCAGCAAGCCCACTGCTGGGTGTATATCCAGAGGAAATGATATTGACACACAGAAGAGATGTCCACACTCCtaagttcattgcagcactattcacaattgccaggTTTCACAAACAATTCCTTATTTTTGAATAAGGTTTCgtttctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47308329 565 + 50890351 ttactc--tttcgtagtaaccatcctaacagatgtgagtttatagcttcttgaagtttAtatgtatgtaagtatgt--------acatatacgtatatatacaaatgtgtgtattcatacatatacatccacacatacatatgtacatatgtgcagatacgtatgtacatatatatgcatgtgtatg-----tgtatgtatatatgtatacatatgtatacacatatatGTGTAAAAAGTGAAATTTTGcagtgagctatcacttcacagctgttagattgcctattatcaaaatggtgaaagatcagtgttggtgagcatggggagaaaagaaaatccttacacaccattggtggatgtgtaaattaatataaccattttagaaaacagtatggaagctcctcaaaaaactaaa-gtgcaacaaccgtataatccagcaagcccactgctgggtgtatacccagaggaaatgaaatcggc-cacagaagagatgtccacactcctaagttcattgcagcactattcacaattgccaggTTTCACAAACAATTCTATATTTTTGAATAAGGTTTCGTTTctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3608729 556 - 49145316 ctactctttttcatagtaaccatcctaacagatgtcaggttatagcttatcgaagtttatatgtatgtatgtatgtatgtatacacgtatatgtgtacatccaaatgtatgcatacatacatatgcatcca-ac---------tgtatatatacatacatatgtatatatgtacatgt------atg-----cgtgtgtgtatatgtatacatatgtatacacatatatgtgta-AAAGTAAAATTTTGcagtgaaatatcacctcacagctgttagactggctagtttcaaaatgatgaaaggtaagtgttggtgaggatggggagaaaagaaaatccttgcacaccattggtggacatgtaagttaatacagccattttggaaaacagtatggaagctcctcgaaaaactaaaagtgcgaccaccatataatccagaagtctcacttt---gtatatacccagaagaaataaaatcggcacacagaagagatgtccacactcctaagttcat-gcagcactattcacgatgactaagttataaaaATGATTCTATATTTTTGAAAAAGGATTCATTTCTT i calJac3.chr22 I 309 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=2100.000000 s hg38.chr19_GL949753v2_alt 366366 1 + 796479 C s panTro4.chr19 59555711 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56463149 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103169610 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47628396 1 + 51301725 c i papAnu2.chr19 C 0 I 612 s chlSab2.chr6 47308894 1 + 50890351 c i chlSab2.chr6 C 0 I 30 s calJac3.chr22 3609285 1 - 49145316 C i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e macFas5.chr19 55544928 0 + 59248254 C e rheMac3.chr19 60436251 2435 + 64156825 I a score=113885.000000 s hg38.chr19_GL949753v2_alt 366367 177 + 796479 TGTCCCTGTAGAGAAAACGGGCTCAAATTACACATTAGCTGAGCTCTGAGTACTCAC------------------------------------------------------------------------TCATGTGTGTATCTATGAGGGTGCATGTTC----------GTGTGTGTTTCAGTATGTGGTTTTTCCATTCTGTGTACTCACCCATGTCTGTAACTATGAGGGTGCATGTTCACgtgtgtgtgtgtgtgt s panTro4.chr19 59555712 257 + 63644993 TTTCCCTGTAGAGAAAACGGGCTCTAATTACACATTAGCTGAGCTCTGAGTACTCACCCAtgtatgtatctatgagggtgcatgttcgtgtgtgtgtgtttcagtatgtggtttttctattctgagtgctcatgtgtgtatctatgagggtgcatgttcac--atgtgtgtgtgtgtttgagtatgtgGTTTTTCTATTCTGAGTACTCACCCACgtatgtatctatgagggtgcatgtgcatgcgtgtgtgtgtctgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56463150 185 + 60714840 TTTCCCTGTAGAGAAAATGGGCTCTAATTACACATTAGCTGAGCTCTGAGTACTCAC------------------------------------------------------------------------CCCtgtatgtatctatgagggtgcatgttcacatatgtgtgtgtgtgtttcagtatgtggtttttctattctgagtactcacccatgtatgtatctatgagggtgcatgtgcacacgtgtgtgtgtgt-- i ponAbe2.chr19 C 0 I 316 s nomLeu3.chr10 103169611 187 - 106955855 TCTCCCTGTAGAGAAAACGGGTTCTAATTACACATTAGCTGAGCTCTGAGGACTCAC------------------------------------------------------------------------CCACgtgtgtatctatgagggtgcgtgttcatgtatgtgtgtgtgcgtttcagtatgtgGTTTTTCTATTCTGAGTACTCACCCATGTGTGTATCTGTGAGGATGCATGTTCACATATGTGTGTGCGTTT i nomLeu3.chr10 C 0 I 78 s calJac3.chr22 3609286 155 - 49145316 TCTCCCTGTAGAGAAAACAG--------TACACATTAGCTGAACTCTGAGTACTCAC------------------------------------------------------------------------CCATGTGTGC------------------------GTGTGTGTGTGTGTTTCAGTAAGTGGTTTTCCCATTCTGAGTACTCACCCATGTATGTATCTAGAAGGGTGCATGTGCACGTGTGTGTGTGTGTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e chlSab2.chr6 47308895 30 + 50890351 I e papAnu2.chr19 47628397 612 + 51301725 I e macFas5.chr19 55544928 0 + 59248254 C e rheMac3.chr19 60436251 2435 + 64156825 I a score=464443.000000 s hg38.chr19_GL949753v2_alt 366544 616 + 796479 ----------------------------------------------------------------------------ttcagtgtgtgGTTTTTCCCATTTTTCCTCCCTTGAGGATATCGCATTGTATGTTTTGGATTCTTTGATCTTCCAATTAAATTACATCATTTAGAATTGCTTTCACTAAGTGTGAAA-CAATAAAAA-TTTTTTTTAATTGTGGCTCTGGAAATACCTTCCTTTCCCTTTCACTCTGTATCAAGATTTGTAA-----ATTTTTTAAAAtttttgttgttattttaagttctggggcacatgtgcaggatctgcaggtttgttacacaggtaaacatgtgccatggtggtttgctgcacctgtcaacccatcacctaggtattaagcccagcatgcattggctgttgttcctaatcctctccctgtcccaactcaccctcctccaacaggtcccagtgtgtgctgtccccctccctgtgttcatgtgatctcactgttcagctcccacttataagtgagaacatgcagtgtttggttttctgttcctgcattggtttgctgaggataatggcttccagctccatccatgtccctgccaaggacatgatattgttcctttttatggatgcatagtattccatggtgtatatgtatcacattttctttatccagtctatcattgat s panTro4.chr19 59555969 617 + 63644993 ----------------------------------------------------------------------------ttcagtgtgtgGTTTTTCCCATTTTTCCTCCCTCGAGGATATCGCATTGTATGTTTTGGATTCTTTGATCTTCCAATTAAATTACAGCATTTAGAACTGCTTTCACTAAGTGTGAAAACAATAAAAA-ATTTTTTTAATTGTGGCTCTGGAAATACCTTCCTTTCCCTTTCACTCTGTATCAAGATTTGTAA-----ATTTTTTAAAAtttttattgttattttaagttctgcggtacatgtgcaggatctgcaggtttgttacacaggtaaacatgtgccatggtggtttgctgcacctgtcaacccatcacctagatattaagcccagcatgcattggctgttgttcctaaccctctccctgtcccgactcaccctcctccaacaggtctcagtgtgtgctgtccccctccctgtgttcatgtgatctcactgttcagctcccacttataagtgagagcatgcagtgtttgcttttctgtttctgcattggtttgctgagaataatggcttccagctccatccatgtccctgccaaggacatgatcttgttcctttttatggctgcatagtgttccatggcgtatatgtatcacattttctttatccagtctatcgttgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56463651 611 + 60714840 ----------------------------------------------------------------------------TTCAGTATGTGGTTTTTCCCATTTTTCCTCCCTCGAGGATATCACATTGTATGTTTTGGATTCTTTGATCTTCCAATTAAATTACATCATTTAGAATTGCTTTCACTAAGTGTGaaaataataaaaatttttttttaattGTGGCTCTGGAAATACCTTCCTTTCTCTTTCACTCTGTATCAAGATTTGTAA-----ATTTTTTAAAAtttttattcttattttaagttctggggtacatgtgcaggatctgcaggtttgttacacaggtaaacatgtgccatagtggttt-ctgcacctatcaacccatcatccaggtattaagcccagcacgcattagctattgttcctaatcctctccctgtcccatctcaccctcctccaacaggccccagtgtgtgttgttcccctccctgtgtccatgtgatcccattgttcagctcccacttataagtgagaacatgcagtgttttcttttctgtttctgcattggtttgctgagaataacggcttccagctccatccatgtccctgccaaggacatgatcttgttcctttttatggctgcatagtattccatggtgtatatgtatcacattttctttatccagtctatc------ i ponAbe2.chr19 I 316 C 0 s nomLeu3.chr10 103169876 616 - 106955855 ----------------------------------------------------------------------------GTTAGTGTGTGGTTTTTCCCATTTTTTCTCCCTCAAAGATATCACATTTTATGTTTTGGATTCTTTAATCTTCCAATTAAATTACATCATTTAGAATTGCTTTCACTGAGTGTGAAAACAATAAAATGTTTTTTTAAATTGTGGCTCTGGAAATATCTTCCTTTCCCTTTCACTCTGTATCGAGATTTGTGA---ATATTTTTTAAAAAttttattgttattttaagttctggagtacatgtgcaggatctgcaggtttgttacacaggtaaacgtgtgccatggtgatttgctgcacctgtcaacccatcacctaggtattaagcccagcatgcattagctattgttcctaaccctctccctgtcccaacctgccctcctccaacagtccacagtgtgtgctgtccccctccctgtgtccatgtgatctcattgttcagctcccactt----gtgagaacatgcagtgtttggttttctgtttctgcattggtttgctgaggataatggtttccaggtctgtccatgtccctgccaaggacatgatcttgttcctttttatgggtgcatagtattccatggtgtatatgtatcacattttctttatccagtctatcgttgat i nomLeu3.chr10 I 78 C 0 s calJac3.chr22 3609441 687 - 49145316 TTCAGTAAGTGGTTTTCCCAATCTGAGTACTCATCCATGTATGTAACTCTGAGGATGCATGTGCACATGTGTGTGTTTCAGTATGTGG-TTTTCCCAtttttcctccctcaagaatgccacattatacattttggattctttgctcttccaactaaattacatcatttagaattgctttcactgagtgtgacaacagtaaaat-atttttttaattgtgactttggaaataccttcctttccctttcactctctatcaag-tttgtgaaaaaaatt------aatttttatttgtattttaagttctggggtacatgtgcaggatctgcaggtttgttacacaagtaaacatgtgccatggtggtttgctacatgtatcagtccatcacctacgtattaagcccagcatgcattagctgtttatcctaatgctttccccttcctgccctgccctcctccaatgggcctcagtgtgtgtagttcccctccctgtgtccataggatctcattgttcagctcccacctataagtaagaacatggagtgtctggttttctgttcctatgttggtttgctgaggataatggctcccaactccatccatggcctggccaaaggtgtgatcttgtttctttttatggctgcatagtattccatggtgtatatgt---acattttctttaaccagtctgtcattgat i calJac3.chr22 C 0 I 24412 e canFam3.chr1 19897846 6779 - 122678785 I e chlSab2.chr6 47308895 30 + 50890351 I e papAnu2.chr19 47628397 612 + 51301725 I e macFas5.chr19 55544928 0 + 59248254 C e rheMac3.chr19 60436251 2435 + 64156825 I a score=698544.000000 s hg38.chr19_GL949753v2_alt 367160 1358 + 796479 gggcatttgggttgattccaggtctttgctactatgaatagtgttgcaaaaaacatatgcatgcatgtatctttgtaatagaatgatttatattcctttgggtatatacccagggattgctgagtcaaatggtatttctggttctagatctttgaggaatcaccacaccatcttccacaatggttgaactaattacattcccactaacagtgtaaaagcatttctatttctctgcaacctcaccggcatctgtttctccttgactttttgataatcgcaattccaactggtgtgagatggtatcccattgaggttttgacttgcatttctctaatgaccagtgatgttgagctttgttc--catgtttcctggccacatgaatgtcttcttttgacaagtgtctgctcatgccttttgcccacttattaa------tgttttattcctgtaaatttgtttaagttccttgtggattctggatgttagacctttgtcagatggacagattgcaaaaattgtctcccattctgtagcttgtctgttcgctctgataatggtttctcttgctgtgcagacgctctttagtttaatttgatcccatttgtcaattttagcttttgttgcaattgcttttggtgatttcgtcatgaagtctttgcccatctttgtcctgaattatattAAATAAAGTCTTTGTCCTGAATTATATTAAATAAAGCATAAGGGAAAAGATGTAGAAGGGAAAGTACATGTAATGGTTAAGGCGTCTACTGCCAATCCCTCCCCGTTCCTCAAGATGAAGCCTGACATGCTGGGTTTAATGTGTGAGACAAGCTGCCGACAGGTCgtttgcctttgtctttaataatttagattaacacagaaatcttcaccatgaatttctgaaggcctttctttagtatctcctggtgttgaatttgctgttggaaggtccaatcccagtgagcatgcaaatccattggaaataatttgcatttttacaaataaataattttaggattttttttttgtttccagGACAGACTTCCTTGTATTTTTTTAATGAGTTAAAAATTATATAATATAAAAATAACATTTAAAAACCCACAATTCAggccgggcacggtggctcatgcctgtaatcccagcactttgggaagccgagacgggcggatcacttgaggtcaggagtttgagaccagcctggtcaacatggcaaaaccccgtctttactaaaaatacaaaaattagccaggcatggtgtcaagcacctgtaatcccagctactcgggaggctgagacaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgtgccactacactc s panTro4.chr19 59556586 1329 + 63644993 gggcatttgggttgattccaggtctttgctattatgaatagtgttgcaaaaaacatattcatgcatgtatctttgtaatagaatgatttatattcctttgggtatatacccagggattgctgggtcaaatggtatttctggttctagatctttgaggaatcaccacaccatcttccacaatggttgaactaattacattcccaccaacagtgtaaaagcatttctatttctctgcaacctcaccagcatctgtttctccttgactttttgataatcgcaattccaactggtgtgagatggtatcccattgaggttttgacttgcatttctctaatgaccagtgatgttgagcttttttc--catgtttcccggccacatgaatgtcttct---gagaagtgtctgctcatgccttttgcccacttattaa------tgttttattcttgtaaatttgtttaagttccttgtggattctggatgttagacctttgtcagatggacagattgcaaaaattgtctcccattctgtagcttgtctgttcgctctgataatggtttctcttgctgtgcagatgctctttagtttaatttgatcccatttgtcaattttagcttttgttgcaattgcttttggtgatttcttcatgaagtctttgcccgt--------------------------gcctatgtcctgaattatattaaataaagcataagggaaaagatgtagaagggaaagtacatgtaatggttaaggcgtctactgccaatccctccccgttcctcaagatgaagcctgacatgctgggtttaatgtgtgagacaagctgccaacaggtcgtttgcctttgtctttaataatttggattaacacagaagtcttcaccatgaatttctgaaggcctttctttagtatctcctggtgttgaatttgctgttggacagtccaatcccagtgagcatgcaaatccattggaaataatctgcatttttacaaataaatacttttaggattttttttttgtttccaggccagacttccttgtatttttttaatgagttaaaaattatataatataaaaataacatttaaaaacccacaattcaggccgggcacggtggctcatgcctgtaatcccagcactttgggaagccgagacgagcggatcacttgaggtcaggagtttgagaccagcccggtcaacatggcaaaaccccgtctttactaaaaatacaaaaattagccaggcatggtgtcaagcacctgtaatcccagctactcgggagactgagacaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgcgccactgcactc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56464262 1322 + 60714840 ----------gttgattccaggtctttgctattatgaatagtgttgcaaaaagcatatgcatgtatgtatctttgtaatagaatgatttatattcctttgggtatatacccagggattgctgggtcaaatggtatttctggttctagatctttgaggaatcaccacagcatcttccacaatggttgaactaattacgttcccactaacagtgtaaaagcatttctatttctctgcaacctcaccagcatctgtttctccttgactttttgataatcgccattccgactggtgtgggatggtatcccattgaggttttgacttgcatttctctaatgaccagtgatgtggagcttttttc--catgtttcctggcgacatgaatgtcttcttttgagaagtgtctgctcatgccttttgcccacttattaa------tgttttattcttgtaaatttgtttaagctccttgtggattctggatgttagacctttgtcagatggacagattgcaaaaattgtctcccattctgtagcttgtctgtttgctctgataatggtttctcttgctgtgcagacgctctttagtttaatttgatcccatttgtcaattttagcttttgttgcaattgcttttggtgatttcatcatgaagtctttgcccgt--------------------------gcctatgtcctgaattatattaaataaagcataagggaaaagatgtagaaaggaaagtctatgtaatggttaaggcgtctactgccaatccctccccgttcctcaagatgaagcctgacatgctggatttaatgtgtgagacaagctgccgccaggtcatttgcctttgtctttaataatttggattaacatagaagtcttcaccatgaatttctgaaggcatttctttagtatctcctggtgttgaatttgctgttggaaggtccaatcccagtgagcatgcaaatccattggaaataatttgcatttttacaaataaataattttaggattttttttttgttaccaggccagacttccttgtatttttttaatgagttaaaaattatataatataaaaataacatttaaaaatccacaattcaggccgggcacggtggctcatgcctgtaatcccagcactttgggaagccgagacgggcagatcacttgaggtcaggagtttgagaccagcctggtcaacatggcaaaaccccgtttttactaaaaatacaaaaattagccaggcatggtgtcaagcacctgtaatcccagctattcgggaggctgagacaggagaattgcttgaacctgggaggcagaggttgcagtgagcagagattgcaccactgcactc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103170492 1339 - 106955855 gggcatttgggttgatttcaggtctttgctattatgagtagtgttgcaaaaaacatatgcatgcatgtgtctttgtaatagaatgatttatattcctttgggtatatacccagggattgctgggtcaaattgtatttctggttctagatctttgaggaattaccacagcatcttccacaatggttaaactaattacattcccactaacagtgtaaaagcatttctatttctctgcaacttcaccagcatctgtttctccttgactttttgataatcgccagtcagactggtgtaggatggtatcccactgaggttttgacttgcatttctctaatgaccagtgatgtggagctttttttaatatgtttgttggccacatgaatgtcttcttttgagaagtgtctgttcgtgccttttgcccacttattaatgaggttgttttattcttgtaaatttgcttaagttccttgtggattctggatgttagacctttgtcagatggaaagattgcaaaaattgtctcccattctgtagcttgtctgttcgctctgataatggtttctcttgctgtgcagatgctctttagtttaatttgaacccgtttgtcaattttagcttttgttgcaattgcttttggtgattgcatcatgaaatctttgcccgt--------------------------gcctatgtcctgaattttattaaataaagcataagggaaaagatgtagaagggaaagtacatgtaatggttaaggcgtctactgccaatccctccctgttcctcaagatgaagcctgacatgctgggtttaatgtgtgagacaagctgccaacaggtcgtttgcctttgtctttaataatttggattaacatagaagtcttcagcatgaatttctgaaggcatttctttagtatctcctggtgttgaatttgctgttggaaggtccagtcccagtgagcatgcaaatccattggaaataatttgcatttttacaaataaataattttagga-tttctttctgtttccaggccagacttccttgtatttttttaatgagttgaaaattatataatctaaaaataacatttaaaaacccacaattcaggccgggcatggtggctcatgcctgtaatcccagcactttgggaagccaagacaggcagatcacttgaggtcaggagtttgagactagcctggtcaacatggtaaaaccccgtctttactaaaaatacaaaaattagccaggcatggtgtcaagcacctgtaatcccagctactcgggaggctgagacaggagacttgcttgaacctgggagacagaggttgcagtgagcagagattgtgccactgcactc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e calJac3.chr22 3610128 24412 - 49145316 I e chlSab2.chr6 47308895 30 + 50890351 I e papAnu2.chr19 47628397 612 + 51301725 I e macFas5.chr19 55544928 0 + 59248254 C e rheMac3.chr19 60436251 2435 + 64156825 I a score=36254.000000 s hg38.chr19_GL949753v2_alt 368518 45 + 796479 cagcctgagtgacagagcaagactctgtctcacacaaaaacaaaa s panTro4.chr19 59557915 45 + 63644993 cagcctgagtgacagagcaagactctgtctcacacaaaaacaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56465584 45 + 60714840 cagcctgagtgacagagcaagattctgtctcacacaaaaacaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103171831 45 - 106955855 cagcctgagtgacagagcaagactctgtctcacacaaaaacaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55544928 43 + 59248254 cagcctggatgatggagcgagtctctgtct--cacaaaaacaaaa i macFas5.chr19 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e calJac3.chr22 3610128 24412 - 49145316 I e chlSab2.chr6 47308895 30 + 50890351 I e papAnu2.chr19 47628397 612 + 51301725 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=121373.000000 s hg38.chr19_GL949753v2_alt 368563 115 + 796479 acaaaagcaaaaaca------------aCCCCTCACAATTCAGCCTAGGATATGTTTATTAAATTTACatttgtctttttgcttaagattgctttggtattcgtcctc-tttttggttccatatgaat s panTro4.chr19 59557960 114 + 63644993 acaaaagcaaaaaca------------acccc-cacaattcagcctaggatctgtttattaaatttacatttgtctttttgcttaagattgctttggtattcttcctc-tttttggttccatatgaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56465629 115 + 60714840 ccaaaagcaaaaaca------------aacccccacaattcagcctaggatatgtttattaaatttacatttgtctttttgcttaagattgctttggtattcatcctc-tttttggttccatatgaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103171876 127 - 106955855 acaaaagcaaaaacaaaaacgaaaacgaacccccacaattcggcctaggatatgtttattaaatttacatttgtctttttgcttaagattgctttggtattcatcctc-tttttggttccatctgaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55544971 104 + 59248254 ------------aca------------agaCCCCACAATTCCGCCTAGGATACGTGTATTCGATTGACatttgatctttttcttaggattgctttggtattcatcctcttttttggttccatatgaat i macFas5.chr19 C 0 I 497 s chlSab2.chr6 47308925 116 + 50890351 acaaaaacaaaaaca------------aaaCCCCACAATTCAGCCTAGGATATGTGTATTCAATTGACatttgatctttttcttaggattgctttggtattcatcctcttttttggttccatatgaat i chlSab2.chr6 I 30 I 461 e canFam3.chr1 19897846 6779 - 122678785 I e calJac3.chr22 3610128 24412 - 49145316 I e papAnu2.chr19 47628397 612 + 51301725 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=567887.000000 s hg38.chr19_GL949753v2_alt 368678 337 + 796479 tttaggattgttttttctaattctgtgaaaaaaatgatgttgatattttgatgggaattgcattgaatctaaatattgctttgggaagtgtgatcattttcacaatattgattcttccaatccatgagcatgggatatatttctattttgctgtgtcatctacaatttctttcagcagcattttgttgttcttcttgtagagatctttcacctcctcggctaggtatatacttagatatttttaa-tttttgcaactgatgtacaagggattgagttttgcagcaacctggatgagctggaggccattattcATGAcaccacatccagctaatttttg s panTro4.chr19 59558074 335 + 63644993 tttaggatt--tttttctaattctgtgaaaaaaatgatgttgatattttgatgggaattgcattgaacctaaatattgctttgggaagtgtgatcattttcacaatattgattctgccaatccatgagcatgggatatatttctattttgctgtgtcatctacgatttctttcagcagcattttgttgttcttcttgtagagatctttcacctcctcggttaggtatattcttagatatttttaa-tttttgcaactgatgtacaagggattgagttttgcagcaacctggatgagctggaggccattattcATGAcaccacatccagctaatttttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56465744 338 + 60714840 tttaggattgttttttctaattctgtgaaaaaaatgatgttgatattttgatgggaattgcattgaatctaaatattgatttgggaagtatgatcattttcacaatattgattcttccaatccatgagcatgggatatatttctattttgctgtgtcatctacgatttctttcagcagcgttttgttgctcttcttgtagagatatttcacttccttggttaggtatattcttagatatttttaattttttgcaactgttgtacaagggaTTGAGttttgcagcaacttggatgagctggaggccattattcATGATGccacatccagctaatttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103172003 334 - 106955855 tttaggatttttttttctaattctgtgaaaaaaatgatgttgatattttgatgggaattgcattgaatctaaatattgatttgggaagcatgatcattttcacaatattgattcttccaatccatgagcatgggatatatttctattttgctgtgtcatctacgatttctttcagcagcattttct---tcttcttgtagagatatttcacctccttggttaagtatattcttagatattttcaattttttgcaactgttgcac-agggattgagttttgcagcaagttggatgagctggaggccattattcATGAcaccacatccagctaatttttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55545572 332 + 59248254 tttaggattgctttttctaatcctgtg--caaaatgatactggtattttgatgggaattgcattgtatctgaagattgctttgggcaatatgatca-tttcacaatactgattcttccaatccatgagcatgggatttatttctgttttgctgtgccatctacgatttctttcagcagcattttactg---ttcttgtagagatctttcacctccttggttaggtatcttcttaggtatttttaattttttgcaactgatatacaaaggattgagttttgcagcaacttggatgagctggaggccattattcATGAcaccacatccagctaatttttg i macFas5.chr19 I 497 C 0 s papAnu2.chr19 47629009 335 + 51301725 tttaggattgctttttctaatcCTGTG--CAAAATGATactggtattttgatgggaattgcattgaatctgaagattgctttgggcagtatgatca-tttcacaatactgattcttccaatccatgagcatgggatttatttctgttttgcgGTGCCATCTACGATTTCTTTCAGCAGCGTTTTACTGTTCttcttatagagatctttcacctccttggttaggtatcttcttaggtatttttaattttttgcaactGATATACAAAGGATTGagttttgcagcaacttggatgagctggaggccattattcatgacaccacatccagctaatttttg i papAnu2.chr19 I 612 C 0 s chlSab2.chr6 47309502 335 + 50890351 tttaggattgctttttctaattctgtg--caaaatgatactggtattttgatgggaattgcattgaatctgaagattgctttgggcagtatgatca-tttcacaatactgattcttccaatccatgagcatgggatatatttctgttttgctgtgccatctacgatttctttcagcagcgttttactgttcttcttgtagagatctttcacctccttggttaggtatcttcttaggtatttttaattatttgcaactgatgtacaagggattgagttctgcagcaacttggatgagctggaggccattattcATGAcaccacatccagctaatttttg i chlSab2.chr6 I 461 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e calJac3.chr22 3610128 24412 - 49145316 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=182065.000000 s hg38.chr19_GL949753v2_alt 369015 81 + 796479 tattttttgtagagatgcggttttgccatgttgcccaggctggtcttgaactcctgggcccaagtgacccgcccgccttga s panTro4.chr19 59558409 81 + 63644993 tatttcttgtagagatgaggttttgccatgttgcccaggctggtcttgaactcctgggcccaagtgacccgcccgccttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56466082 81 + 60714840 tattttttgtagagatgaggttttgccatgttgcccaggctggtcttgaactcctgggcccaagtgacccgcccaccttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103172337 81 - 106955855 tattttttgtagagatgaggttttgccatgttgcccaggctggtctcgaactcctgggcccaagtgacccgcccaccttga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55545904 81 + 59248254 tattttttgtagagaagaggttttgctgtgtggcccaggctggtcttgaactcctgggcccaaatgacctgcttgccttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47629344 81 + 51301725 tattttttgtagagatgaggttttgctgtgttgcccaggctggtcttgaattcctgggcccaaaggacctgcctgccttga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47309837 81 + 50890351 tattttttgtagtgaagaggttttgctgtgtggcccaggctggtcttgaactcctgggcccaagtgaccggcccgccttga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3634540 81 - 49145316 TAATttttttacagatgacgttttgtcatgttgcccaggctggtcttgaacccctggcctcaagtgacccgcctgccttga i calJac3.chr22 I 24412 C 0 e canFam3.chr1 19897846 6779 - 122678785 I e rheMac3.chr19 60436251 2435 + 64156825 I a score=895812.000000 s hg38.chr19_GL949753v2_alt 369096 307 + 796479 cctcccaaagtgctgggac-tgcaggcatgagccacggtgcccggccTATCATAGCACTTTTGATCATTGGGATAATTCCTCCTCCTTGTCATTTTTGGACACATGCTTCCCACATGCCTCATCTTCCAGAGAGGGTTTCCACCAGGGCTGTGCTGGGAGTTAAGGCTGGAAAAGGGGAGATGGTTCCAGCTGCCAGTGCCACATGAGTCTACTCAGGGCTGTAACCAGCAGGG-AAGGTCCAGTGTGAGCCTCAGACTCGCATGTGGGACAGACGCCCATGTGTGACAACGCTGCAGTGAATCTGTTT-- s panTro4.chr19 59558490 307 + 63644993 cctcccgaagtgctgggac-tgcaggcatgagccacggtgcccggccCATCATAGCACTTTTGATCATTAGGATAATTCCTCCTCCTTGTCAGTTTTGGACACATGCTCCCCACATGCCTCATCTTCCAGAGAGGGTTTCCACCAGGGCTGTGCTGGGAGTTAAGCCTGGAAGAGGGGAGATGGTTCCACCTGCCAGTGCCACATGAGTCTGCTCAGGGCTGTAACCAGCAGGG-AGGGTCCAGTGTGAGCCTCAGACTCGCATGTGGGACAGACGCCCATGTGTGACAACGCTCCAGTGAATCTGTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56466163 307 + 60714840 cctcccagagtgctgggac-tgcaggcataagccacggtgcccggccTATCACAGCACTTTTGATCATTAGGATAATTCCTCCTCCTTGTCATTTTTGGACACATGCTTCCCACATGCCTCATCTTCCAGAGAGCGTTTCCACCAGGGCTGTGCTGGAAATTAAGGCTGGAAAAGGGGAGATGGTTCCATCTGCCAGTGCCACATGAGTCTGCTCAGGGCTGTAACCAGCAGGG-ATGGTCCAGTGTGAGCCTCAGACTCGCATGTGGGACATATGCCCATGTGTGACAACACTGCAGTGAATCTGTTT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103172418 308 - 106955855 ccttccgaagtgctgggac-tgcaggcatgagccacggtgcccagccCATCATAGCACTTTTGATCATTAGGATAATTCCTTCTTCTTGTCATTTTTGGACACATGCTTCCCACATGCCTCATCTTCTAGAGAGGGTTTCCACCAGGGCTGTGCTGTGAGTTAAGGCTGGAAAAGGGGAGATGGTTCCACCTGCCAGTGCCACATGAGTCTGCTCAGGGCTGTAACCGGCAGGGAAGGGTCCAATGTGAGCCTCAGACTTGCACCTGGGACAGACGCCCATGTGTGACAACGCTGCAGTGAATCTGTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60438686 308 + 64156825 cctcccaaagtgctgggac-tgcaagcatgagccacggtgcccggccCATCATAGCACTTTTGATCATGAGGATAATTCCTCCTTCTTGTCATTCTTGGACACATGCTTCCCACATGCCTCACCTTCCAGATAGGGTTTCTACCAGGGCTGTGCTGGGAGCTAAGGCTGGAAAAGGGGAGATGGTGCCACCCGCCAGTGCCACACAAGTCTGCTCAGGGCTGTCACCAGCAGGGGAGGGGCCAATGTGAGCCTCAGGCTCACATGCGGGACAGACGCCCATGTGTGATAACGCTACAGTGAATCTGTTT-- i rheMac3.chr19 I 2435 C 0 s macFas5.chr19 55545985 308 + 59248254 cctcccaaagtgctgggac-tgcaggcatgagccacggtgcccggccCATCATAGCACTTTTGATCATGAGGATAATTCCTCCTTCTTGTCATTCTTGGACACATGCTTCCCACATGCCTCATCTTCCAGAGAGGGTTTCTACCAGGGCTGTGCTGGGAGCTAAGGCTGGAAAAGGGGAGATGGTGCCACCCGCCAGTGCCACACGAGTCTGCTCAGGGCTGTCACCAGCAGGGGAGGGGCCAATGTGAGCCTCAGACTCACATGTGGGACAGACGCCCATGTGTGATAATGCTGCAGTGAATCTGTTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47629425 308 + 51301725 cctcccaaagtgctgggac-tgcaggcatgagccacggtgcccggcccgTCATCGCACTTTTGATCATGAGGATAATTCCTCCTTCTTGTCATTCTTGGACACATGCTTCCCACATGCCTCCTCTTCCAGAGAGGGTTTGTACCAGGGCTGTGCTGGGAGCTAAGACTGGAAAAGGGGAGATGGTTCCACCCGCCAGTGCCACACGAGTCTGCTCAGGGCTGTCACCAGCAGGGGAGGGGCCAACGTGAGCCTCAGACTCGCATGTGGGACAGACGCCCATGTGTGATAACGCTGTAGTGAATCTGTTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47309918 308 + 50890351 cctcccaaagtgctgggac-tgcaggcatgagccacggtgcccggccCATCATAGCACTTTTGATCATGAGGACAATTCCTCCTTCTTGTCATTCTTGGACACATGCTTCCCACATGCCTCACCTTCCAGAGAGGGTTTCTACCAGGGCTGTGCGGGGAGCTAAGGCTGGAAAAGGGGAGATGGTGCCACCCGCCAGTGCCACACGAGTCTGCTCAGGGCTGTCACCAGCAGGGGAGGGTCCAATGTGAGCCTCAGGCTCGCATGTGGGACAGACGCCCATGTGTGATAACGCTGCAGTGAATCTGTTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3634621 311 - 49145316 cgtctcgaagtgctggaaagtgcaggtgtgagccacagcacctggccAATCATAGCACTTTTGATCATTAGGATGATTCCTCCTTCTTGTCATTCTTAGACACTCGCCCCCAACAGGCCTTATTTGTCAGGCAGGATTTCTACCAGGGCTGTGCTGGGAGTTACAGCTTGAAAAGGGGAGATGGTTCCACCTGCCAGTGTCACATGAGTCCGCTCAGGGCTTTGCTTAGCAAGGGAGGGTCCAATGTGAGCCTCAGACTCACATGTGGGACAGACACTGATGTCTGATAATGCTGCAGTGAATCTGTTTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19897846 6779 - 122678785 I a score=2576251.000000 s hg38.chr19_GL949753v2_alt 369403 894 + 796479 CACACACATGGA-GGAGGCGGCTCAGGGCTGACCATGGACCTGAGTCAATGAGCAGAGATATCCCAGTGCCATCCACAAACACAGGGGAGAAGGAGCCACAACTTCTCACTTTCATCCAAAACCCCGAC-CCCTCCCTGTCTGTGAGGG-------CCTGGGGTTCTCCTCTGTCTCATACAGAGGCAGAAACCTCCCCCTTAGTGACCCCCAGACTT-TGCAAGTCACCAGCAGCCGCTCGGCTCTGGCCTCTTCTGCTTCTTAAGGTTTCCTGCCTATGACAGGAAGTCTCATTTCTCATTTTCTTCATCGGACCATGGCTACATATTTCAGACACATTA-TAAGTAGGTTTTCCCAATGTTAGGAGCAGATGTGGGCTGTTGA----GCATTTAAGTTGCTCACCGTGACTGTGCAGTCCAACACCAGGATCCACTCATGTTTCAGCCCCTCAAGACTTAACCCGGTCTGGAAATGTACCATGACTGAGGCCCTCCCATGACCCAGGCACCACTGGCccccaaaaccactc--agga-ggggggttcatgacaaca-ggctccaaatgaggaaaccgaggctcagagatgggacttactgcccaaggtcatgcaCGCAGGGA----TGAAGGTGAGCAATTCAGAA---AAAATTAACTCCCTATCCCACCGCCAAATCAGAGCTCAAGAC-AAGTACTTGTTCCCAAAACCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAGCGGGGCTGGGGGTGGGAGGGACCCCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAAGGGGAGCTGAACGCTATT-AAAAAAT------------AGGAAG-AAAAAAAGAAGGGAAGTCT--AAGAAGGAAACT----GGAAGAAATAAAACCCATACTCCAAAGAC-AAAAGAAGAGTC s panTro4.chr19 59558797 897 + 63644993 CACACACATGGA-GGAGGCGGCTCAGGGCTGACCATGGACCTGAGTCAATGAGCAGAGATATCCCAGTGCCATCCACAAACACAGGGGAGAAGGAGCCACAACTTCCCACTTTCATCCAAAACCCCAAC-CCTTCCCTGTCTGTGAGGGC------CCTGGGGTTCTCCTCTGTCTCATACAGAGGCAGAAACCTCCCCCTTAGTGACCCCCAGACTT-TGCAAGTCACCAGCAGCCACTCGGCTCTGACCTCTTCTGCTTCTTAAGGTTTCCTGCCTATGACAGGAAGTCTCATTTCTCATTTTCTTCATAGGACCGTGGCTACATATTTCAGAAACATTA-TAAGTAGGTTTTCCCCATGTTAGGAGCAGATGTGGGCTGTTGA----GCACATAAGTCACTCACCGTGACTGTGCAGTCCAACACCAGGATCCACTCATGTTTCAACCCC-CAAGTCTTAACCCGGTCTGGAAATGTACGATGACTGAGGCCCTCCCATGACCCAGGCACAACTGGTCCCCAAAACCACTC--AGGAGGGGGGGTTTATGACAACA-AGCTCcaaatgaggaaaccgaggctcagagatgggacttactgcccaagatcatgcagGCAGGGG----TGAAGGTGAGCAATTCAGAA---AAAATTAACTCCCTATCCCACCCCCAAATCAGAGCTCAAGAC-AAGTACTTGTTCCCAAAACCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAGCGGGGCTGGGGGTGGGAGGGATGCCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGACCTGAACACTATTAAAAAAAT------------AGGAAGAAAAAAAAGAAGGGAAGTCT--AAGAAGGAAACT----GGAAGAAATAAAACCCATACTCCAAAGAC-AAAAGAAGAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56466470 896 + 60714840 CACACACATGGAGGGAGGCGGCTCAGGGCTGACCATGGACCTGAGTCAATGAGCAGAGATATCCCAGTGCCATCCACAAACACAGGGGAGAAGGAGCCACAGCTTCCCACTTCTATCCAAAGCCATGAC-CCCTCCCTGTCTGTGAGGGC------CCTGGGGTTCTCCTCTGTCTCATACAGAGGCAGAAACCTCCACCTTAGTGACCCCT-GACAT-TGCAAGTCACCAGCAGCCACTCGGCTCTGACCTCTTCTGCTTCTTAAAGTTTCCTGCCTATGACAGGAAGTTTCATTTCTCATTTTCTTCGTAGGACCATGGCTACATATTTCAGACACATTA-TAAGTAGGTTTTCTCAGTGTTAGGCGCAGATGTGCGCTGTTGA----GCACGTAAGTTGCTCACCGTGACTGTGCAGTCCAACACCAGGATCCACTCATGTTTCAGCCCCTCAAGTATTAACCGGGTCTGGAAATGTATGACGACTGACGCCCTCCCATGACCCAGGCACCACTGGCCCCCAAAATCACTC--AGGA-GGGGGATTCATTACAACA-AGCTCcaaatgaggaaaccgaggctcagagatggagcttactgcccaaggtcatgcagGCAGGGA----TGAAGGTGAGCAATTCAGAA---AAAATTAACTCCCTATCCCACCCCCAAATCAGAGCTCAAGAC-AAGTACTTGTTCCCAAAACCTTGAAGGCAGACTG--------AAATGCAGGGGAATGTCCAAGGAAGCGGGGCTGGGGGTGGGAGGGACACTGAGGAGGCAGGAATGACTTAGAGGTTACTTTTAAGAGAGGCGGACCTGAACACTATT-AAAAAAT------------AGGAAGAAAAAAAAGAAGGGAAGTCT--AAGAAGGAAACT----GGAAGAAATAAAACCCATACTCCAAAGAC-AAAAGAAGAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103172726 894 - 106955855 CACACACATGGA-GGAGGCGGCTCAGGGCTGACCATGGACCTGAGTCAATGAGCAGAGATATCCCAGTGCCATCCACAAACACAGGGGATGAGGAGCCACAACCTCCCACTTTCATCCAAAGCCATGAC-CCCTCCCTGTCTGTGAGGGC------CCTGGGGTTCTCCTCTGTCTCATACAGAGGCAGAAACCTCCCCCTTAGTGACCCCCAGACTT-TGTGAGTCACCAGCAGCCACTCGGCTCTGACCTCTTCTGCTTCTGAAGGTTTCCTGCCTATGACAGGAAGTTTCATTTCTCATTTTCTTCGTAGGACCGTGGCTACATATTTCAGACACATTA-TAAGTAGGTTTTCCCAGTGTTAGCAGCAGATGTGGGCTGTTGA----GCACATAAGTCACTCACCGTGACTGTGCAGTCCAACACCAGGATCCACTCACGTTTCAACCCCTCAAGTCTTAGCCCGGTCTGGAAATGTACCATGACTGAGGCCCTCCCATGACCTGGACACCACTGGcccgcaaaa-cacac--agga-caggggttcatgacaaca-agctccaaatgaggaaaccgaggctcagagatgggacttgctgcccaaggtcatgcagGCAGGGA----TGAAGGTGAGCAATTCAGAA---AAAATTAACTCCCTATCCCACCCCCAAATCAGAGCTCAAGAC-AAGTACTTGTTCCCAAAACCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCCAGGAAGCGGGGCTGGGGGTCGGAGGGAAGCCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGACCTGAACACTATT-AAAAAAT------------AGGAAGAAAAAAAAGAAGAGAAGTCT--AAGAAGGAAACT----GGAAGAAATAAAA-CCATACTCCAAAGAC-AAAAGAAGAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60438994 897 + 64156825 CGCACACATGGA-GGAGGCGGCTCAGGGGTGACCATGGACCTGAGTCAATGGGCAGAGATACCCCAGTGCCATCCACAAACACAGGGGAGGAGGAGCCACAACTCCCCACTTCCGTCCAAAACCATGAC-CCCTCCCTGAGTGTGAGGGC------CCGGAGGTTCTCCTCTGTCTCATACAGAGGTGGAAACCTCCCCCTTAGTGACCGCCTGACAT-CGCAAGTCACCAGCA-CCACTCGGCTCTGACCTCTTCTGCTTCTTAAGGTTTCCTGCCTATGACAGGAAATTTCATTTCTCATTTTCTTCGTAGGACTGTGGCTGCATATTTCAGACACATTA-TAAGCAGGTTTTCCCAGTGCTGGGAGCAGATGTGGGCTGTTGA----GCACGTCAGTCGCTCACCGTGACTGCACAGTCCAACACCAGCATCCACGCATGCGTCCACCCCTCAAGTCTTAACCCGGTCTGGAAATGTGCCATGACCGAGGCCCTCCCATGACCCAGGCACAACTGGCCCCCGAAC-CGCTC--AGGA-GGGGGGTTCATGACAACA-GGCCCcaaatgaggaaactgaggctcagagatggggcttactgcccaaggtcatgcagGCAGGGG----TGAAGGTCAGCAATTCAGAA---AAAATAAACTCCCTATCCCACCCCGAAGTCAGAACTCAAGACTAAGTACTTGTTTCCAAACCCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAGCGGGATTGGGGGTGGGAGGGACACCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGAGGTGAACACTATT-AAAAAAT------------AGAAA--AAAGGGAGAAGGAAAGTCT--AAGAAGGAAACTGTTGGGAAGAAATAAAACCCGTATTCCAACGAC-AAAAGAAGAGTC i rheMac3.chr19 C 0 I 47 s macFas5.chr19 55546293 898 + 59248254 CGCACACATGGA-GGAGGCGGCTCAGGGGTGACCATGGACCTGAGTCAATGGGCAGAGATACCCCAGTGCCATCCACAAACACAGGGGAGGAGGAGCCACAACTCCCCACTTCCGTCCAAAACCATGAC-CCCTCCCTGAGTGTGAGGGC------CCGGGGGTTCTCCTCTGTCTCATACAGAGGTGGAAACCTCCCCCTTAGTGAGTGCCTGACAT-CGCAAGTCACCAGCAGCCACTCGGCTCTGACCTCTTCTGCTTCTTAAGGTTTCCTGCCTATGACAGGAAATTTCATTTCTCATTTTCTTCGTAGGACTGTGGCTGCATATTTCAGACACATTA-TAAGCAGGTTTTCCCAGTGCTGGGAGCAGATGTGGGCTGTTGA----GCACGTCAGTCGCTCACCGTGACTGTGCAGTCCAACACCAGGATCCACGCATGTGTCCACCCCTCAAGTCTTAACCCGGTCTGGAAATGTGCCATGACCGAGGCCCTCCCATGACCCAGGCACAACTGGCCCCCAAAC-CACTC--AGGA-GGGGGGTTCATGACAACA-GGCTCcaaatgaggaaactgaggctcagagatggggcttactgcccaaggtcatgcaggcagggg----tgaaggtcagcaattcagaa---AAAATAAACTCCCTATCCCACCCTGAAGTCAGAACTCAAGACTAAGTACTTGTTTCCAAACCCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAGCGGAGTTGAGGGTGGGAGGGACACCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGAGGTGAACACTATT-AAAAAAT------------AGAAA--AAAGGGGGGAGGAAAGTCT--AAGAAGGAAACTGTTGGGAAGAAATAAAACCCATATTCCAACGAC-AAAAGAAGAGTC i macFas5.chr19 C 0 I 47 s papAnu2.chr19 47629733 895 + 51301725 CGCACACATGGA-GGCGGCGGCTCAGGGGTGACCATGGACCTGAGTCAATGGGCAGAGATACCCCAGTGCCATCCACAAACACAGGGGAGGAGGAGCCACAACTCCCCACTTCCGTCCAAAACCATGAC-CCCTCCCTGAGTGTGAGGGC------CCGGGGGTTCTCCTCTGTCTCATACAGAGGTGGAAACCTCCCCCTTAGTGACCGCCTGACAT-CGCAAGTTACCAGCAGCCACTCGGCTCTGACCTCTTCTGCTTCTTAATGTTTCCTGCCTATGACAGGaagtttcatttctcattttctttgtagGACTGTGGCTGCATATTTCAGACACATTA-TAAGCAGGTTTTCCCAGTGCTGGGAGCAGATGTGGGCTGTTGA----GCACGTCAGTCGCTCACCGTGACTGTACAGTCCAACACCAGGATCCACACATGTGTCCACCCCTCAAGTCTTAACCTGGTCTGGAAATGTG-CATGACCGAGGCCCTCCCATGACCCAGGCACAACTGGCCCCCGAAC-CGCTC--AGGA-GGGGGGTTCATGACAACA-GGctccaaatgaggaaactgaggctcagagatgggacttactgcccaaggtcatgcaggcAGGGG----TGAAGGTCAGCAATTCCGAA---AAAATTAACTCCCTATCCCATCCCGAAATCAGAACTCAAGACTAAGTACTTGTTTCCAAACCCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAgcggggttgggggtgggagggacaCCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGAGGTGAACactatt-aagaaat------------agaaa--aaagcgGGGAGGAAAGTCT--AAGAAGGAAAC--TTGGGAAGAAATAAAACCCATATTCCAACGAC-AAAAGAAGagtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47310226 906 + 50890351 CGCACACATGGA-GGAGGCGGCTCAGGGGTGACCATGGACCTGAGTCAATGGGCAGAGATACCCCAGTGCCATCCACAAACACAGGGGAGGAGGAGCCACAACTCCCCACTTCCATCCAAAACCATGAC-CCCTCCCTGAGTGTGAGGGC------CCAGGGGTTCTCCTCTGTCTCATACAGAGGTGGAAACCTCCCCCTTAGTGACCGCCTGACAT-TGCAAGTCACCAGCAGCCACTCGGCTCTGAGCTTTTCTGCTTCTTAATGTTTCCTGCCTATAACAAGAAGTTTCATTTCTCATTTTCTTCATAGGACTGTGCCTATATATTTCAGACACATTA-TAAGCAGGTTTTCCCAATGTTGGGAGCAGATGTGGGCTGTTGA----GCACGTCAGTCGCTCACCGTGACTGTGCAGTCCAACACCAGGATCCATGCATGTGTCTACCCCTCAAGTCTTAACCCGGTCTGGAAATGTGCCATGACCAAGGCCCTCCCATGACCCAGGCACAGCTGGCCCCCAAAC-CACTC--AGGA-GGGGGGTTCATGACAACA-GGCTCcaaatgaggaaaccgaggctcagagatgggacttactgcccaaggtcatgcaggcagggg----tgaaggtcagcaattcagaa---AAAATTAACTCCCTATCCCACCCCGAAGTCAGAACTCAAGACTAAGTACTTGTTTCCAAACCCTTGAAGGCAGACTG--------AGATGCAGGGGAATGCCCAAGGAAGCGGGATTGGGGGTGGAAGGGACACCGAGGAGGCAGGAATGACTCAGAGGTTACTTTTAAGGGAGGGGGAGGTGAACACTGTT-aaaaaataagaagaaaaaaaaaaa--aaaaaaaGGAGGGAAGTCT--AAGAAGGAAACT----GGAAGAAATAAAACCCATACTCCAAAGAC-AAAAGAAAAGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3634932 899 - 49145316 CACACACATGGA-GAAGGCAGCTCAGGTCTGACCATAGACCTGAGTCAA-AAGTAGAGGTATTCCAGTGCCATCCACAAACACAGAGGAGGAGAAGCCACCGCTTCTGTCCTTCATTTGAAATCCTGAC-ACTTTCCTGTCTGTGGGGTCCCTGGGCCTGGGGCTCTCTTCTATCTCACACAGAGATCAAAACTTCCCCCTTAGTCACCCCTTGACAT-TGCAAGTCACCAGCAGCCACTCAGCTCTGGCCTCTGCTGCTTCTTAAGGTTTCCGGCCTGTGTCAGGAAGTTTCATTTCTCA-TTTCTTCATAGGACCATGGCTACATATTTCAGAAACTTTGTTAAGTAGCTTTTCTCAGTGTTTGGAGCAGATGTGGGCTGTTGC----GCACATAAGTTGTTCACCACAACTGTGCAGTCCAACAGCAGGATCAACTCATGTTTCAACCCCTCAGGTCTTAACCTGGTCTGGAAAAGTACCACAACTGAGGTCCTCCCATGACCCAGGCACAACTGGCCCCCAAAACCACTC--AGGA--GGGGGTTTATGACAACA-GGCCGcaaatgaggaaactgaagctcagagttgggacttactgcccaaggtcatgcaggcaggga----ccaaggtcagcaattcagaAAATAAAACGGATTCCCTATCCCACCACAAAATCGAAGCTCAAGACTAAGTACCTGTTCCCAAACCCTTTAATCCAGACTG--------AGATGCAGGAGAATGCCCAAGGAAACAGTGTTAGGGATAGGGCGGACACTGATAAGGCAGGAATGATTCAGAGGTTACTTTTAAGGGAGGTGGAGGTGAACGCTATT-AAAAAAT------------GGCGG--------AGGAGGGAAGTATAAAAAAAGGAAACT----GAAAGAAACAAAACCCATGCTCCAAAGATAAAAAGAAGAGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19904625 843 - 122678785 cacacacacGGA-GACAA-GGCTCTGTTTTGACCTCTCGGCTTGGTCAGTGGGCAGACACATGCCAGTGCCCTC--CCAACACATGATGTCAGGGTCTGATGACTTCCAGAGTCACCCAGAGACTTGATGCCCTTCCCGTCTATGAGGA-------CCTGGCTGCCTGTTCTGGC-AACACAGGGGCAGAAG--TCAAATTTCACCACTCCAGGCCACACCCCAGGCACTGATGTTCACTCAGCTTTGACCTGTGTTTCTGTT--GTGGTTCCTCTCAGTTCCAGAGAATTTCAATTCCC-TTTCCTCCATTGGCTTTTGCAAACA-ATTTCAGAATCAGTA-TAAATAGTATTTCTCAGCTTTAGGGGCACATGGGGTCATTCAAGAGTGTGCATCACTGACCCTCCCTCACTGTGGGGTCTGACACTTATA-CTTCTTGTGTCCTGAACACAATAATTTCAATCAGGTTAGGAAAC-TAACATGATTGAT-CCCACTCATGGTCCAGGTCCCAGCCCCCCACAGAACCACCCTGAGGA-GTGGGGTTCA-GACAACACAGTACTACACCAGATCACT---------------------CTGCTAAAAGTCTTG-GGGCAGTGGATGCTGGAGGAGGATCGACCTG-----AACATCAGCTTTGT------TCCTCAAATCAGAGCACTCACCCACATA-TGATCTCCTACAATTTGGAGTCAGGATGCCTCTGTAGGATGTTCAGCTCCGCCATAGGAACAAG--------------GGGGCACTGATGACCCAGGAAGGACTCACAGGAGTGTTCCCAAGAAGGGTGAG-----------T-AAATAAC------------ATCAA---AGGAAAATAGAGAAGTCC--ATAGAGG-CTCT----GATAGAAAGAAAGCCCACACTGCAAGGCC-AGGAGACGGGTT i canFam3.chr1 I 6779 C 0 a score=2543.000000 s hg38.chr19_GL949753v2_alt 370297 5 + 796479 AGCAT-- s panTro4.chr19 59559694 5 + 63644993 AGCAT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56467366 5 + 60714840 AGCAT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103173620 5 - 106955855 AGCAT-- i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47630628 3 + 51301725 --tct-- i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 47311132 5 + 50890351 AGTAT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3635831 5 - 49145316 AGCAT-- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19905468 6 - 122678785 -GTTTCC i canFam3.chr1 C 0 C 0 e macFas5.chr19 55547191 47 + 59248254 I e rheMac3.chr19 60439891 47 + 64156825 I a score=146351.000000 s hg38.chr19_GL949753v2_alt 370302 59 + 796479 TTCTTTATTTCTC-----------------------------------------------------------------------------C--TTTTTTTCTCATTGCCAATTGCAGCTCAACTTGAATTTCACAGCC s panTro4.chr19 59559699 61 + 63644993 TTCTTTATTTCTT-----------------------------------------------------------------------------CTTTTTTTTTCTCATTGCCAATTGCAGCTCAACTTGAATTTCACAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56467371 59 + 60714840 TTCTTTATTTCTC-----------------------------------------------------------------------------C--TTTTTTTCTCATTGCCAATTGCAGCTCAACTTGAATTTCACAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103173625 58 - 106955855 TTCTTTATTTCTC-----------------------------------------------------------------------------C--TTTTTTTCTCTTTGCCAATTGCAGCTCAACTTGAATTTCACAGC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60439938 59 + 64156825 ttctttatttctc-----------------------------------------------------------------------------c--tttttttctCATTGCCATTTGCAGCTCGACTTGAAGTTCACAGCC i rheMac3.chr19 I 47 M 398 s macFas5.chr19 55547238 59 + 59248254 ttctttatttctc-----------------------------------------------------------------------------c--tttttttctCATTGCCATTTGCAGCTCGACTTGAAGTTCACAGCC i macFas5.chr19 I 47 C 0 s papAnu2.chr19 47630639 136 + 51301725 ttctttattcctctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctc--cttttttctcattGCCATTTGCAGCTCAACTTGAAGTTCACAGCC i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47311137 58 + 50890351 TTCTTTATTTCT------------------------------------------------------------------------------C--CTTTTTTCTCATTGTCATTTGCAGCTCAACTTGAAGTTCACAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3635836 58 - 49145316 TTCTTTATTTCT------------------------------------------------------------------------------C--CTTTTTTCTCATTGCCACCTGCAGCCCAACTTGAATTTCACAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19905474 67 - 122678785 TTCCTTATTTGCCTGTATTTCT--------------------------------------------------------------------C--CTCTGGGCTTATTGCCACAGTGACCTCGACCTGAGCTAAGCAGA- i canFam3.chr1 C 0 C 0 a score=172421.000000 s hg38.chr19_GL949753v2_alt 370361 82 + 796479 CGATG-TGAGAT--GCGTCTCTGCTGATCTGAGC-CTGTCCTGCAGCATGGACCTGCAACTTTCCTGAAGCATCTCCAGGG--CTGGA------- s panTro4.chr19 59559760 82 + 63644993 CGATG-TGAGAT--ACGTCTCTGCTGATCTGAGC-CTGTCCTGCAGCATGGACCTGCAGCTTTCCTGAAGCATCTCCAGGG--CTGGA------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56467430 82 + 60714840 CGATG-TGAGAT--GCATCTCTGCTGATCTGAGC-CTGTCCTGCAGCATGGACCTGCAGCTTTCCTGAAGCATCTCCAGGG--CTGGG------- i ponAbe2.chr19 C 0 I 213 s nomLeu3.chr10 103173683 74 - 106955855 ---------GAT--GCGTCTCTGCTGATCTGAGC-CTGTCCTGCAGCATGGACCTGCAGCTTTCCTGAAGCATCCCCAGGG--CTGGA------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55547297 82 + 59248254 AGGTG-TGCGAC--GCGTCTCTGCTGATCTGAGT-CCGCCCTGCAGCAGGGACCTGCAGCTTCCCTGAAGCATCCCCAGGG--CTGGG------- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47630775 82 + 51301725 AGATG-TGCAAC--GTGTCTCTGCCGATCTGAGT-CTGCCCTGCAGCAGGGACCTGCAGCTTCCCTGAAGCATCCCCAGGG--CTGGG------- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47311195 82 + 50890351 AGATG-TGCAAC--GCGTCTCTGCCGATCTGAGT-CTGCCCTGCAGCAGGGACCTGCAGCTTCCCTGAAGCATCCCCAGGG--CTGGG------- i chlSab2.chr6 C 0 I 1 s calJac3.chr22 3635894 84 - 49145316 AGATG-TGAGATACGTGTCTCTGCTTATCCAACT-CTGCCCTGCAGCATGGATCTGCAACTTCCCAGAAGCATCTCCAGGG--CTGGA------- i calJac3.chr22 C 0 I 8 s canFam3.chr1 19905541 87 - 122678785 -GATGACAAGGT--CTGTCTGTGCTGACATGAGCTCCACAGAATAGCAAGAACCTG--AGTTCCCTTCAGCATCT---GGGTCCTGGGAACCTCA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60439997 398 + 64156825 M a score=681847.000000 s hg38.chr19_GL949753v2_alt 370443 310 + 796479 TGCCATGGTAAGGATCCCGCAATGCTGTGTTGATGGACGGGCTGAAGGAGGGAAGGAGACCCCAC-GGGGAGGCTCTGAGAAGAAGAAAAAGCCCCCAGTCACTCTCACTTGGACAGGACAGACTCAGAAAGGTGCTGTGTC---------CTGTGTCCTGACCCTTGATGAGATGAGGACAGATGAGGCAAATCGCAGAAAAGGGTCAGGGAGATACCATTT-CTGTATGAAATATCTGAAGACAGCCTGGT-GCCTGCCCCAGTCCCAGCCTTGGGGAAATGAAAGCCAGGC-----TCCTGGAGAGGGCAGTTCCCCTTCTTGT s panTro4.chr19 59559842 319 + 63644993 TGCCATGGTAAGGATCCCGCAATGCTGTGTTGATGGACAGGCTGAAGGAGGGACAGGGACCCCAC-GGGGAGGCTCTGAGAAGAAGAACAAGCCCCCAGTCACCCTCACTTGGACAGGACAGACTCAGAAAGGTGCTGGGTCTATCGGCTTCTATGTCCTGACCCTTGATGAGATGAGGACAGATGAGGCAAATCACGGAAAAGGGTCAGGGAGATACCATTT-CTGTATGAAGTATCTGAAGAGAGCCTGGT-GCCTTCCCCAGCCCCAGCCTTGGGGAAATGAAAGTCAAGC-----TCCCGGAGAGGGCAGTTCCCCTTCTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56467725 318 + 60714840 TGCCATGGTAAGGATCCCGCAATGCTGTGTTGATGGACGGGCTGAAGGAGGGAAGGGGACCCCAC-AGGGAGGCTCTGAGAAGAAGAACAAGCCCCCAGTCACCCTCACTTGGACAGGACAGACTCAGAAAGGTGCTTGGTCTATCGGCTCCTATGTCCTGACCCTTGATGAGATGAGGACAGATGAGGCAAATCGCAGAAAAGGGTCAGGGAGATACCATTT-CTGTATGAAGTATCTGAAGAGAGCCTGGT-GCCTTCCCCAA-CCCAACATTGGGGAAATGAAAGCCAGGC-----TCCCGGAGAGGGCAGTTCCCCTTCCTGT i ponAbe2.chr19 I 213 C 0 s nomLeu3.chr10 103173757 308 - 106955855 TGCCATGGTAAGGATCCCGCAATTCTGTGCTGATGGACGGGCTGAAGGAGGGAA------------GGGGAAGCTCCGAGAAGAAGAAGAAGCCCCCAGTCAGCCTCACTTGGACAGGACAGACTCAGAAAGGTGCTGGGTCTATCGGCTCCTATGTCCTGACCCTTGATGAGATGAGGACAGATGAGGCAAATCGCAGAAAAGGGTCAGGGAGATGCCATTT-CTGTATGAAGTATCTGAAGAGAGCCTGGT-GCCTTCCCCAGCCCCAGCCTTGGGGAAATGAAAGCCAGGC-----TCCCGGAGAGGGCAGTTCCCCTTCCTGT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55547380 319 + 59248254 CGCCATGGTAAGGATCCCACAATGCTGTGTTGATGGACGGGCTGAAGGAAGGAAGGAGACCCCAC-GGGGAGGCTCTGAGAAGAAGAACAAGGCCCCAGTGACCCTCACTTGGACAGGACAGACTCAGAAAGGTGCTGGGTCTATTGGCTCCTATGTCCTGACCCTTGGTGAGATGAGGACCGATGGGGCAAATAGCAGAAAAGGGTCAGGGAGATACCATCT-CTGTACGAAGTATCTGAAGAGAGCCTAGT-ACCTGCCCCAGCCCCAGCCTTGGGGAAATGGAAGCCAGCC-----TCCCGGAGAGGGCAGTTCCCCTTCCTGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47630858 319 + 51301725 CGCCGTGGTAAGGATCCCACAATGCTGTGTTGATGGACGggctgaaggaaggaaggagacccCAT-GGGAAGGCTCTGAGAAGAAGAACAAGCCCCCAGTGACCCTCACTTGGACAGGACAGACTCAGAAAGGTGCTGGGTCTATTGGCTCCTATGTCCTGATCCTTGGTGAGATGAGGACAGATGGGACAAATAGCAGAAAAGGGTCAGGGAGATACCATTT-CTGTGCGAAGTATCTGAAGAGAGCCTGgt-gcctgccccagccccagccttggGGAAATGAAAGCCAGCC-----TCCCGGAGAGAGCAGTTGCCCTTCCTGT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47311278 319 + 50890351 CGCCATGGTAAGGATCCCGCAATGCTGTGTTGATGGACGGGCTGAAGGAAGGAAGGAGACCCCAC-GGGGAGGCTCTGAGAAGAAGAACAAGCCCCTAGTGACCCTCACTGGGACAGGACAGACTCAGAAAGGTGCTGGGTCTATTGGCTCCTATGTCCTGACCCTTGGTGAGATGAGGACAGATGGGCCAAATAGCAGAAAAGGGTCAGGGAGATACCATCT-CTGTACGAAGTATCTGAAGAGAGCCTGGT-GTCTGCCCCAGCCCCAGCCTTGGGGAAATGGAAGCCAGGC-----TCCCGGAGAGGGCAGTTCCCCTTCCTGT i chlSab2.chr6 I 1 C 0 s calJac3.chr22 3635986 314 - 49145316 TGCCTTGGTAAGGATCCTGCAATGCTGCTTTGATGGACAGCCTAAAGGAGAGAG---GAACCCAT-GGGGAGGTTCTG---AGAAGAACGAGCACCTAGTAACCCTCACTTAGACAGGACAAATTCAGAAAGGTGCTGGGTCTATTGGCTCCTGTGTCTTGACCCTTTATGAGATGGGAACAGATGAAGCAAACAGCAGAAAAAAATCAGGGAGACACCATTT-CTGTCTGAATTGTATGAAAAGAGCCTGGTGGCTTCCCCCAGCCTCATCTAAAAGGAAATGAAAGCCAGGC-----TCCCAGAGACGGCATTTCCCCTCCCTGT i calJac3.chr22 I 8 C 0 s canFam3.chr1 19905628 183 - 122678785 -TCCATGGTGAGGACCC--CAGGGATGTGCTGA------GACTGAAG---------AGACCCCATGGGGGAGGCTCTGGAAAGGAAGGACATGTCCTGGTG--TCTGACCTGGACATGACAT-CTCAGTAG--------------------------------CCTT-----------------------------------AGGGT----------CCATTTGCTGCAT----------------------T-GCCTT------------------GGACACGAAAGCCAGGCTAGTATCCTGGGAACAAGATGTTCCTTT----- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60439997 398 + 64156825 M a score=949242.000000 s hg38.chr19_GL949753v2_alt 370753 302 + 796479 GGGGCTGATGACGGGACAACCTCGTGATGGAGAACCCAGG-CTCCCAGTAGATTTAC------------TCCATCC---AGGAACTGTGGTCTCGTCCATCTGCAC-AGCCAGGGGCTGT-GGAGGAGATGCCATGACTTCCACCCGCAAACCTCTGATCTGTCTTGATGAAATTGAAAGAGGGAGAGGGGAGACTGTAGCCTGGAAGGAATCCCACCTCACAACTTGGTCCTGATTGAATAGA------AGACCCCAGAGGTTCACAGAGATCCCAAGGTGGGGAGGATCTGCCCAGGGTTCAGGAGGCGAATCTCCCTCAGGAA s panTro4.chr19 59560161 303 + 63644993 GGGGCTGATGACGGGACAACCTCATGATGGAGAACCCAGG-CTCCCAGTAGATTTAC------------TCCATCC---AGGAACTGTGGCTTCGTCCATCTGCAC-AGCCGGGGGCTGTGGGAGGAGATGCCATGACTCCCACCCGCAAACATCTGATCTGTCTTGATGAAATTGAAAGAGGGAGAGGGGAGACTGTAGCCTGGAAGGAATCCCGCCTCACAACTTGGTCCTGACTGAATAGA------AGACCCCAGAGGCTCACAGAGATCCCAAGGTGGGGAGGATCTGCCCAGGGTTCAGGAGGCGAATCTCTCTCAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56468043 301 + 60714840 GGAGCTGATGACGGGACAACCTCGTGATGGAGAACCCAGG-CTCCCGGTAGATTTAC------------TCCATCC---AGGAACTGTGGCCTCATCCATCTGCAC-AGCCA-GGGCTGTGGGAGGAGACGCCATGACTCCCACCTGCAAACCTCTAATCTGTCTTGATGAAATTGAAAGAGGGAGAAGGGAGACTGTAGCCTGGGAGGAATCCTGCCGCACAACTTGGTCCTGATTGAATAGG------AGGTCCCAGAGGTTCACAGAGATCCCAAGGTGGGGAGGATCT-TCCAGGGTTCAGGAGGCGAATCTCTCTCAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103174065 303 - 106955855 GGGGCTGCTGACGGGACAACCTCGTGATGGAGAACCCAGG-CTCCCAGTAGATTTAC------------TCCATCC---AGGAACTGTGGCCTCATCCATCTGCAC-AGCCAGGGGCTGTGGGAGGAGACGCCATGACTCCCACCTGCAAACCTCTGATCTGTCTTGATGAAATTGAAAGGGGGAGAGGGGAGACTGTAGCCTGGGAGGAATCCCGCCTCACAACTTGGTCCTGATTGAATAGG------AGACCCCAGAGGTTCACAGAGATCCCAAGGTGGGGAGGATCTGCCCAGGGTTCAGGAGGCAAATCTCTCTCAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60440399 303 + 64156825 GGGGCTGCTGATGGGACAGCCTCGTGATGGAGAGCCCAGG-CTCCCAGTAGATTTAC------------TCCATCC---AGGAACTGTGGCCTCGTCCATCTCCAC-AGCCAGGGGCTGTGGGAGGAGACGCCATGACTCCCACACTCACGCTCCTGATCTGTGTTGATGAAATTGAAAGAGGGAGCGGGGAGACTGTAGCCTGGGGGGAATCCCACCTCACAACTTGGTCCTGATTGAATAGG------AGGCCCCAGAGGTTCGCAGAGATCCCAGGGTGGGGAGGATCCGCCCAGGGTTCAGGAGGCGAATCTCTCGCAGGAA i rheMac3.chr19 M 398 C 0 s macFas5.chr19 55547699 303 + 59248254 GGGGCTGCTGATGGGACAGCCTCGTGATGGAGAGCCCAGG-CTCCCAGTAGATTTAC------------TCCACCC---AGGAACTGTGGCCTCGTCCATCTCCAC-AGCCAGGGGCTGTGGGAGGAGACGCCATGACTCCCACACTCACGCTCCTGATCTGTCTTGATGAAATTGAAAGAGGGAGCGGGGAGACTGTAGCCTGGGGGGAATCCCACCTCACAACTTGGTCCTGATTGAATAGG------AGACCCCAGAGGTTCGCAGAGATCCCAGGGTGGGGAGGATCCGCCCAGGGTTCAGGAGGCGAATCTCTCGCAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47631177 303 + 51301725 GGGGCTGCTGACGGGACAGCCTCGTGATGGAGAACCCAGG-CTCCCAGTACATTTAC------------TCCATCC---AGGAACTGTGGCCTCCTCCATCTGCAC-AGCCAGGGTCTGTGGGAGGAGACGCCACCACTCCCACACTCATGCTCCTGATCTGTCTTGATGAAATTGAAAGAGGGAACAGGGAGACTGTAGCCTGGGAGGAATCCCACCTCACAACTTGGTCCTGATTGAATAGG------AGACCCCAGAGGTTCGCAGAGATCCCAGGGTGGGGAGGATCCGGCCAGGGTTCAGGAGGCGAATCTCTCACAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47311597 304 + 50890351 GGGTCTGCTGACGGGACAGCCTCGTGATGGAGAACCCAGG-CTCCCAGTAGATTTAC------------TCCATCC---AGGAACTGTGGCCTCCTCTATCTGTACAAGCGAGGGGCTGTGGGAGGAGAGGCCATGACTCCCACACTCACACTCCTGATCTGTCTTGATGAAATTGAAAGAGGGAGCGGGCAGACTGTAGCCTGGGAGGAATCCCACCTCACAACTTGGTCCTGATTGAATAGG------AGATCCCAGAGGTTCGCAGAGATCCCAGGGTGGGGAGAATCTGCCCAGGGTTCAGGAGGCGAATCTCTCACAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3636300 301 - 49145316 GGGGCTGCTGATGGGCCAACCTCAAGATGAAGAATCCAGG-CTCCCAGTAGATTTAC------------TCCACCC---AGGCACTGTAGCCGCATCCATCTGCAC-AGCCAGGGGCTGTGGGAGGCGATGC--TGATTCCCACACTCAAAACCCTGATTTGTCTTGGTAAAATTCAAAGAGGACGAGGGGAGACTATAGCCTGGGAGGAATCGCACCTCACAACTTGGTCCGGATCTATTAGG------AGACCCCAGAGTTTCACAGAGATCCCAAGGTGGGGAGGCTCTGCCCAGGGTTCAGAAGGCAAATCTCTCACAGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19905811 309 - 122678785 AGGGCTACTGACATGACAACCCTGTGACAGGCAGCACTGGCCTCCCAGTGGTCACACCCTGTGTGTCTATCTATCCTGTGGGCACTGAGGTCCC-TTAATTTGCAC-AGCCACAG--CAACAAAGAAGATGCCAAGACCCCCACCCTCATGGCCTTGCTCTGTCTAGGTGAGATCTGAGGAGAG-GAAGGGACACCCTAGTCTGGGAGGGA-CCAACCCCACAGCCAGGCCCTGGTCTGTCAGATATTGCAGGCTCAGGAGGCTCACAGAGA---------GGAGGGGCTCTGCTCAAGATTCAG--GGCAAACCTCTCACAGGGA i canFam3.chr1 C 0 T 14827 a score=98341.000000 s hg38.chr19_GL949753v2_alt 371055 36 + 796479 GCTCCGTGACCCCCTCCTTAGTGTCGCTCCTGTGCC s panTro4.chr19 59560464 36 + 63644993 GCTCCGTGACCCCCTCCCTAGTGTCGCTCCTGTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56468344 36 + 60714840 GCTCCGTGACCCCCTCCTTAGTGTCGCTCCTGTGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103174368 35 - 106955855 GCTCCCTGA-CCCCTCCCTGGTGTCGCTGCTGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60440702 36 + 64156825 GCTCTGGGACCCTCTCCCTAGTGCCGCTCCTGTGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55548002 36 + 59248254 GCTCTGGGACCCCCTCCCTAGTGTCGCTCCTGTGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47631480 36 + 51301725 GTTCCGGGACCCCCTCCCTAGTGTCGCTCCTGTGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47311901 36 + 50890351 GCTCCGGGACCCCCTCCCTAGTGTCGCTCCTGTGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3636601 36 - 49145316 ACTCTATGACTCCCTCCCTAATGCTGCACCTGTGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T a score=6822.000000 s hg38.chr19_GL949753v2_alt 371091 12 + 796479 TCAGTGGGATTT s panTro4.chr19 59560500 12 + 63644993 TCAGTGGGATTT i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47631516 12 + 51301725 TCAGTGGGATTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3636637 12 - 49145316 TCAGTGGGATTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e macFas5.chr19 55548038 0 + 59248254 C e rheMac3.chr19 60440738 0 + 64156825 C a score=7372.000000 s hg38.chr19_GL949753v2_alt 371103 30 + 796479 GGAGAGGATGCCTTAGATTAGAGGGTATTG s papAnu2.chr19 47631528 30 + 51301725 GGAGAGGATGCCTTAGATTAGAGGGAGTTG i papAnu2.chr19 C 0 T 42 s calJac3.chr22 3636649 30 - 49145316 GGAGAAGATACCTTAGATTAGAGGGTATTG i calJac3.chr22 C 0 T 42 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e macFas5.chr19 55548038 0 + 59248254 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 371133 1 + 796479 T e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e calJac3.chr22 3636679 42 - 49145316 T e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e papAnu2.chr19 47631558 42 + 51301725 T e macFas5.chr19 55548038 0 + 59248254 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371134 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGAGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 C 0 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 42 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 42 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21850.000000 s hg38.chr19_GL949753v2_alt 371177 43 + 796479 TCAGTGGGATTTGGAAAAGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371220 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371263 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371306 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAAGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371349 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371392 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371435 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371478 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371521 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371564 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371607 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371650 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=22383.000000 s hg38.chr19_GL949753v2_alt 371693 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371736 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=21990.000000 s hg38.chr19_GL949753v2_alt 371779 43 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGATATTGT s macFas5.chr19 55548038 43 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i macFas5.chr19 T 43 T 43 s papAnu2.chr19 47631516 43 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTGT i papAnu2.chr19 T 43 T 43 s calJac3.chr22 3636637 43 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 T 43 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=10043.000000 s hg38.chr19_GL949753v2_alt 371822 36 + 796479 TCAGTGGGATTTGGAGAGGACGCCTTAGATTAGAGG s macFas5.chr19 55548038 36 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGG i macFas5.chr19 T 43 T 36 s papAnu2.chr19 47631516 36 + 51301725 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGG i papAnu2.chr19 T 43 I 6 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e calJac3.chr22 3636680 43 - 49145316 T e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 371858 6 + 796479 TATTGT e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e calJac3.chr22 3636680 43 - 49145316 T e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e papAnu2.chr19 47631552 6 + 51301725 I e macFas5.chr19 55548074 36 + 59248254 T e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=923.000000 s hg38.chr19_GL949753v2_alt 371864 12 + 796479 TCAGTGGGATTA s calJac3.chr22 3636637 12 - 49145316 TCAGTGGGATTT i calJac3.chr22 T 43 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e papAnu2.chr19 47631552 6 + 51301725 I e macFas5.chr19 55548074 36 + 59248254 T e rheMac3.chr19 60440738 0 + 64156825 C e panTro4.chr19 59560512 0 + 63644993 C a score=8073.000000 s hg38.chr19_GL949753v2_alt 371876 31 + 796479 GGAGAGGACACCTTAGATTAGAGGGTATTGT s panTro4.chr19 59560512 31 + 63644993 GGAGAGGACGCCTTAGATTAGAGGGTATTGT i panTro4.chr19 C 0 C 0 s calJac3.chr22 3636649 31 - 49145316 GGAGAAGATACCTTAGATTAGAGGGTATTGT i calJac3.chr22 C 0 T 43 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56468380 0 + 60714840 C e nomLeu3.chr10 103174403 0 - 106955855 C e chlSab2.chr6 47311937 0 + 50890351 C e papAnu2.chr19 47631552 6 + 51301725 I e macFas5.chr19 55548074 36 + 59248254 T e rheMac3.chr19 60440738 0 + 64156825 C a score=98163.000000 s hg38.chr19_GL949753v2_alt 371907 42 + 796479 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTG s panTro4.chr19 59560543 41 + 63644993 TCAGTGGGATT-GGAGAGGATGCCTTAGATTAGAGGGTATTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56468380 42 + 60714840 TCAGTGGTATTTGGAGAGGATGCCTTAAATTAGAGGGTATTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103174403 42 - 106955855 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGTATTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60440738 42 + 64156825 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55548038 42 + 59248254 TCAGTGGGATTTGGAGAGGATGCCTTAGATTAGAGGGAGTTG i macFas5.chr19 T 36 C 0 s chlSab2.chr6 47311937 42 + 50890351 TCAGTGGGATTCGGAGAGGATGCCTTAGATTAGAGGGAGTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3636637 42 - 49145316 TCAGTGGGATTTGGAGAAGATACCTTAGATTAGAGGGTATTG i calJac3.chr22 T 43 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e papAnu2.chr19 47631552 6 + 51301725 I a score=658844.000000 s hg38.chr19_GL949753v2_alt 371949 236 + 796479 TGTCTTTCAGCAACAAAACCGTAC--AAAAAACACCTGGGCATTTCACATCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCAAACTGCGGTGAAATTTAGGGTTCACACTACAGTTAATCACTTTTGAGG-AAAGCATTCCAGGTTGGTGCCTATCTCTGTGATAAACATCTCCCTTCCTGGCTACAGGTAATGGATTAAAGTAACACTGGCCGAACAGACACTATCTTCACTT s panTro4.chr19 59560584 236 + 63644993 TGTCTTTCAGCAACAAAACCGTAC--AAAAAACACCTGGACATTTCACATCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCAAACTGCGGTGAAATTTAGGGTTCACACTATAGTTAATCACCTTTGAGG-AAAGCATTCCAGGTTGGTGCCTATCTCTGTGATAAACGTCTCCCTTCCTGGCTACAGGTAATGGATTAAAGTAATACTGGCCGAACAGACACTATATTCACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56468422 236 + 60714840 TGTCTTCCAGCAACAAAACCATAC--AAAAAACACCTGGACGTTTCACATCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCAAACTGTGGTGAAATTTAGGATTCACACTACAGTTAATCACCTTTGAGG-AAAGCATTCCAGGTTGGTGCCTATCTCCGTGATAAACGTCTCCCTTCCTGGCTACAGGTAATGGATTAAAGTAACACTGGCCGAACAGACACTATATTCACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103174445 238 - 106955855 TGTCTTTCAGCAGCAAAATCATCCAAAAAAAACGCCTGATCATTTCACATCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCAAACTGCAGTGAAATTTAGGGCTCACACTACAGTTAATCACCTTTGAGG-AAAGCATTCCAGGTTGGTGCCTATCTCTGTGATAAACGTCTCCCTTCCTGGCTACAGGTAATGGATTAAAGTAACACTGGCCGAACAGACACTGTATTCACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60440780 237 + 64156825 TGTCTTTCAGCGACAAAACCATAC--GAAAAACACCTGGACACTTCACGTCAGTGGATAAAGCATGTCTTGTGCCAAATCAGGACCTACCTGTGGTGAATTTTAGGGCTCACACTACAGTCACTCACCTTCGGGGAAAAGCATCCCAGGTTGGTGCCTGTCTCTGTGATAAATGTCTCCCTTCCTGGCTACAGGTAACAGATTAAAGTAACACTGGCCGAAAAGATTCTGTATTCACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55548080 237 + 59248254 TGTCCTTCAGCGACAAAACCATAC--GAAAAACACCTGGACACTTCACGTCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCTACCTGTGGTGAATTTTAGGGCTCACACTACAGTCACTCACCTTCGGGGAAAAGCATCCCAGGTTGGTGCCTGTCTCTGTGATAAATGTCTCCCTTCCTGGCTACAGGTAACAGATTAAAGTAACACTGGCCGAAAAGATTCTGTATTCACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47631558 236 + 51301725 TGTCTTTCAGTAACAAAACCATAC--GAAAAACACCTGG-CACTTCACGTCAGTGGATAAAGCATATCTTGGGCCAAATCAGGACCTACCTGTGGTGAATTTTAGGGCTCACACTACAGTTACTCACCTTTGGGGAAAAGTATCCCAGGCTGGTGCCTGTCTCTGTGATAAACGTCTCCCTTCCTGGCTACAGGTAACAGATTAAAGTAACCCTGGCTGGAAAGATTCTATATTCACCT i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47311979 236 + 50890351 TGTCTTTCAGCAACAAAACCATAC--GAAAAACACCTGG-CATTTCACGTCAGTGGATAAAGCATATCTTGTGCCAAATCAGGACCTACCTGTGGTGAATTTTAGGGCCCACACTACAGTTACTCACCTTTGGGGAAAAGTATCCCAGGTTGGTGCCTGTCTCTGTGATAAACGTCTCCCTTCCTGGCTACAGGTAACAGATTAAAGTAACACTGGCCGAAAAGATTCTATATTCACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3636679 234 - 49145316 TGTCTTTCACCAACAAAACCATAC--AAAAAAAACCTGGACATATCACATTAGTGGATAAAGCATATCGTGTGCCAAATCAGGACCTACCTACAGTGAATTTCAGGGCTCACACTATAGTTACTCACCTTTGGGGAAAAGCATTCCAGGTTTGTGTCTATCT--GTGATAAACGTCTCCCTTCCTGAGTATGGATAATGGATTACAGTAACACTAGCTGAACAGA-ACCATATTCACCT i calJac3.chr22 C 0 T 80641 e canFam3.chr1 19906120 14827 - 122678785 T a score=1165222.000000 s hg38.chr19_GL949753v2_alt 372185 547 + 796479 GATGATTATACTGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCCCCTTTTGACTTtagacaattctctaaagaagatatacaaatggccaacaaacatataaaaaaCATGTATATATGCGTATATAtacatatatatacacacacacacacacacacacacacacacacaca----------ccatggaatacttcagtcataaaaaggaacaaaataatggcattcgcagcaacctggaggcagttggagaccactattctaagtgaaataactcaggaatggaaaaccatcatcatatgttctcataagtgggagctaagctatgaggatgtaaaggcataagaaggatataatggactctggggacccagggggagcaatggga-gggggtgagggataaaagactacgcattgggtacagtgtacactgctcgggtgatgggtgttcc-aaaatctcaaaaatcaccactaaagaacttatgcatgcaaccaaacaccacctgttcccccaaaactactgaaactt-aaaaaTAAATAAATAGATAAA s panTro4.chr19 59560820 503 + 63644993 GATGATTATACTGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCCCCTTTTGACTTTAGACAATTCTCTAAAGAAGATATAcaaatggccaacaaacatataaaaaacatgtatatgtgtgtatatatatg------------------------------------------------------actgaatacttcagtcataaaaaggaacaaaataatggcattcgcagcaacctggaggcagttggagaccactattctaagtgaaataactcaggaatggaaaaccatcatcatatgttctcataagtgggagctaacctatgaggatgtaaaggcataagaaggatataatggactctggggacccagggggagcaatggga-gggggtgagggataaaagactacgcgttgggtacagtgtacactgctcgggtgataggtgtgcc-aaaatctcaaaaatcaccactaaagaacttatgcatgcaaccaaacaccacctgttccccaaaaactactgaaactt-aaaaaTAAATAAATAGATAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56468658 557 + 60714840 GATGATTATACTGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCCCCTTTTGACTTTAGACAATTCTCTAAAGAAGATATAcaaatggccaacaaacatataaaaaacatgtatatgtatgtatatatacatatatatacacacacacacacacacacatacacacacacacacacacacaccccatggaatacttcagccataaaaaggaacaaaataatggcattcgcagcaacctggaggcagttggagaccattattctaagtgaaataactcaggacaggaaaaccatcatcatatgttctcataagtgggagctaagctatgaggatgtaaaggcataagaaggatataatggactctggggacccagggggaacaatggga-gggggtgagggataaaagactacacattgggtacagtgtacactgctcgggtgatgggtgtgcc-aaaatctcaaaaatcaccactaaaaaacttatgcatgcaaccaaacaccacctgttccccaaaaactactgaaactt-aaaaataaataaataaataaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103174683 549 - 106955855 GATGATTATACCGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCCCCTTTTGACTTTAGACAATTCTCTAAAGAAGATA-ACAAATGGccaacaaacatataaaaaacatgtatatgtgtgtatatatacatatatatacaaacacacatacacacacacacacacacacacacacaca----ccatggaatacttcagccataaaaaggaacaaaataatggcatttgcagcaagctggaggcagttggagaccattattctaagtgaaataactcaggaatggaaaaccatcattgtatgttctcataagtgggagctctgctatgaggatgtaaaggcataagaaggatatagtggactctggggacccaggggtaacaatggga-ggggatgagggataaaagactacacattgggtacagtgtacactgctcaggtgatgggtgcgca-aaaatctcaaaaatcaccactaaagaacttacacatgcaacaaaac-ccacctgtttcccaaaaactattgaaactt-aaaa--aaaTAAATAAATAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60441017 522 + 64156825 GATGATTATACTGAAAAATAGCCATAAAATTGTTACCTCCAAATCCAATTCCCCTTTTGACTTTTGACAGTTCTCTAAAGAAGATGTAcaaatggccaacaaacatatgaaaaatatgtagat-----------------------tacacacacacacacac--acacatacacacaca----------ccatggaatactgtggccataaaaaggaacaaaataatggcattcccagcaacctggaggcgcttggagacctttattctaagtgaaataactcaggaatggaaaaccatcatcgtatgttctcgtaagtgggagctatgctatgaggatgtaaaggcacaagaatgatataatggactctggggacccagggggaacaatgggagggggatgagggataaaagaccacacattgggtacagtgtacaccgctcaggtgatgggtgcaccaaaaatctcaaaaatcaccactaaagaacttacgcatgcaacgaaacaccacctgttcccccaaaactattgaaactt-aaaa--aaaTAAATAAATAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55548317 523 + 59248254 GATGATTATACTGAAAAATAGCCATAAAATTGTTACCTCCAAATCCAATTCCCCTTTTGACTTTTgacagttctctaaagaagatgtacaaatggccaacaaacatatgaaaaaTATGTAGAT-----------------------Tacacacacacacacac--acacatacacacaca----------ccatggaatactttggccataaaaaggaacaaaataatggcattcccagcaacctggaggcgcttggagacctttattctaagtgaaataactcaggaatggaaaaccatcattgtatgttctcgtaagtgggagctatgctatgaggatgtaaaggcacaagaatgatataatggactctggggacccagggggaacaatgggagggggatgagggataaaagaccacacattgggtacagtgtacaccgctcaggtgatgggtgcaccaaaaatctcaaaaatcaccactaaagaacttacgcatgcaacgaaacaccacctgttcccccaaaactattgaaacttaaaaa--aaATAAATAAATAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47631794 519 + 51301725 GATGATTATACTGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCTccttttgacttttgacagttctctaaagaagacatacaaatggccaacaaacatatgaaaaatatgtatat-----------------------tacacacacacacacacatacacatacacacaca----------ccatggaatactttggccataaaaaggaacaaaacaatggCATTCCCAGCAACCTGGAGGCgcttggagaccattattctaagtgaaataactcaggaatggaaaaccatcATCGTATGttctcgtaagtgggagctatgCTGTGAGGATGTAAAGGCAcgagaatgatataatggactctggggacccAGGGGGACCAATGgga-ggggatgagggataaaagaccacacattgggtacagtgtacaccgctcaggtgatgggtgcacc-aaaatctcaaaaaccaccactaaagaacttacgcATGCAAcgaaacaccacctgttcccccaaaactattgaaactt-aaaa--a---agaaaagtaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47312215 522 + 50890351 GATGATTATACTGAAAAATAGCCATAAAATTGTTCCCTCCAAATCCAATTCCCCTTTTGACTTTTgacagttctctaaagaagacatacaaatggccaacaaacatatgaaaaaTATGTAGAT-----------------------Tacacacacacacacacatacacatacacacaca----------ccatggaatactttggccataaaaaggaacaaaataatggcattcccagcaacctggaggcgcttggagaccattattctaagtgaaataactcaggaatggaaaaccatcatcgtatgttctcgtaagtgggagctatgctatgaggatgtaaagccacaagaatgatataatggactctggggacccagggggaccaatggga-ggggatgagggacaaaagaccacacattgggtacagcgtacaccactcaggtgatgggtgcacc-aaaatctcaaaaaccaccactaaagaacttacgcatgcaacgaaacaccatctgttcccccaaaactattgaaaCTC-aaat--aaataaataaataaa i chlSab2.chr6 C 0 I 35992 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T a score=32511.000000 s hg38.chr19_GL949753v2_alt 372732 17 + 796479 AATAAATTCACCACATT s panTro4.chr19 59561323 17 + 63644993 AATAAATTCACCGCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56469215 17 + 60714840 aataaattCACCACATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103175232 17 - 106955855 AATAAATTCACCACATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60441539 17 + 64156825 AATAAATTCACCACATT i rheMac3.chr19 C 0 I 49690 s macFas5.chr19 55548840 17 + 59248254 AATAAATTCACCACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47632313 17 + 51301725 aataaattcaccacatt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47312737 35992 + 50890351 I a score=21177.000000 s hg38.chr19_GL949753v2_alt 372749 23 + 796479 CAAAATGacaaccgctgaagccc s panTro4.chr19 59561340 23 + 63644993 AAAAATGacaacggctgaagccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56469232 23 + 60714840 AACAATGacaaccgctgaagccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103175249 23 - 106955855 AACAATGACAACAGCTGAAgccc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55548857 23 + 59248254 AACAACAACAATGGCAAAAATCC i macFas5.chr19 C 0 I 41608 s papAnu2.chr19 47632330 23 + 51301725 aacaaTGACAACAGCAAAAATCC i papAnu2.chr19 C 0 I 29466 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47312737 35992 + 50890351 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=1650.000000 s hg38.chr19_GL949753v2_alt 372772 4 + 796479 cagt s panTro4.chr19 59561363 4 + 63644993 cagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56469255 4 + 60714840 cagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103175272 4 - 106955855 ctgt i nomLeu3.chr10 C 0 I 4217 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47312737 35992 + 50890351 I e papAnu2.chr19 47632353 29466 + 51301725 I e macFas5.chr19 55548880 41608 + 59248254 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=101629.000000 s hg38.chr19_GL949753v2_alt 372776 381 + 796479 gggcgcatgttacagggtgctcttttagtttcggccttccataggcaacttgtgtgtatcagctccattagacccctgccttcctgcaaggacagacggctctctgtatcccagggttctcgccttggtgtaccggaagaaccggatcacatgagggcttggagaatgagtgcaaggtttgattgagtggaaacagctctcagcagaagggcgatggttttctcctggagtcgggcccctggcggcccgggatcctctctgactgtcccagccaagctccatgtcgttctgcca------------------gtcggtggcctgtggtgtgctggtgcccgtccttgcgttcctctcgacatccagccatctgtgtgttcctgcactgacgtgctcctc s panTro4.chr19 59561367 399 + 63644993 gggcgcatgttacagggtgctcttttagttttggccttccataggcaacttgtgtgtatcagctccatgagacccctgccttcctgcaaggacagacagctctctgtatcccagggttctcgccttggtgtaccggaagaaccggatcacatgagggcttggagaatgagtgcaaggtttgattgagtggaaatagctcccagcagaagagagatggttttctcctggagtcgggcccctggtggcccgggatcccctctgactgtcccagccaagctccatgtcgttctgccagtcggtggcctgcggtgtgtcggtggcctgcggtgtgctggtgcccgtcattgcgttcctctcgacatccagccatctgtgtgttcctgcactgacgtgctcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56469259 381 + 60714840 gggcgcatgttacagggtgctcttttagttttggccatccataggcagcttgtgtgtatcagctccattagacccctgccttcctgcaaggacagatggctctctgtatcccggggttctcgccttggtgtaccggaagaaccgtatcacatgagggcttggagaatgagtgcaaggtttgattgagtggaaatagctctcagcagaagggagatggttttcttctggagtcgggcccctggcggcccgggatcctctctgactgtctcagccaagctccatgtcgttctgcca------------------gtcggtggcttgcggtgtgctggttcccgtcattgcgttcctctcgacatccagccatctgtgtgtTCCTGCACTGATGTGCTCCTc i ponAbe2.chr19 C 0 I 13457 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e nomLeu3.chr10 103175276 4217 - 106955855 I e chlSab2.chr6 47312737 35992 + 50890351 I e papAnu2.chr19 47632353 29466 + 51301725 I e macFas5.chr19 55548880 41608 + 59248254 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=52255.000000 s hg38.chr19_GL949753v2_alt 373157 611 + 796479 -------tcagccgccagtgtcttcttcttccgctgatctgcggacgtccagctgcttgtgtgtctgcctgctcaggtctcggagttgttTTTTTTGTTTGTTTGtttgttttttaattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccattatctcgtcatttaacgttaggtatatctcctaaagctatccctccccac-ccgccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggtttttcgtccttgcaatagtttgctgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcatcgttggacatttggcttggttccaagtgtttgctattgtgaatagtgccacaatatagttcaaccattgtggaagtcaatgtggtgattcctcagggatctagaactagaaatacc s panTro4.chr19 59561766 608 + 63644993 ttgatgttcagccgccagtgtcttcttcttccgctgatctgcggacgtccagctgcttgtgtgtctgcctgctcaggtctcggagttgttTTtttt---------tttttttttt--ttatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccacgctggtgtgctgctcccattaactcgtcatttagcattaggtatatctcctaatgctatccctcccccctcccccaccccacaacagtcccccgtgtgtgatgttccccttcctgtgtccatgtgttctcactgttcaagtcccacctatgagtgagaacatgcggtgtttggtttttcgtccttgcaatagtttgctgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttggcttggttccaagtgtttgctactgtgaatagtgccgcaatatagttcaaccattgtggaagtcaatgtggtgattcctcagggatctagaactagaaatacc i panTro4.chr19 C 0 I 4485 e canFam3.chr1 19906120 14827 - 122678785 T e ponAbe2.chr19 56469640 13457 + 60714840 I e calJac3.chr22 3636913 80641 - 49145316 T e nomLeu3.chr10 103175276 4217 - 106955855 I e chlSab2.chr6 47312737 35992 + 50890351 I e papAnu2.chr19 47632353 29466 + 51301725 I e macFas5.chr19 55548880 41608 + 59248254 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=315502.000000 s hg38.chr19_GL949753v2_alt 373768 612 + 796479 atatattaatcacctcagttagttattatttctgtgtgcatgtgtgtgtgcagtgaaaatacttaggatctactctcagctaattttaagtgtacaatacagtattgttacctatagctttcattccatacattagctttccagaattattcatttcggagaattgaaactttgtatcctttgaccaacatcttatttttcccatttccagcccctgctaaccaccattctactctcagcttctatgaatttcactattt-agattccacaattatgtgagattataagatatttatctattaagagttggattcatttcacttagcataatgtcatttgggtccaatcctgctatcacaaatgatctgattttcttctttttcaagactgaataaaactttatatttattatactatgttatcttaatccattcctccatcaatgggcatttatgtcatttatttacctcggctattgtgaatactggtgcagtgaattcatcagtgtggatatatctcttcaagatcttgatttgagttcttttggataattatccggaagttgaaatctggtgtcttatagttcaatttttaacattttgaggaaatgtg s panTro4.chr19 59566859 611 + 63644993 atatattaatcacctcagttagttattatttctgtgtgcatgtgtgtgtgcagtgaaaatacttaggatctactctcagctaattttaagtgtacaatacagtattgttacctatagttttcattccatacattagctttccagaattattcatttcggagaattgaaactttgtatcctttgaccaacatcttatttttcccatttccagcccctgctaaccaccattctactctcagcttctatgaatttcactattttacattccacaattatgtgagattataagatatttatctattaagagttggattcatttcacttagcataatgtcatttgggtccaatcctgctatcgcaaatgatctgattttcttctttttcaagactgaataaaactttatatttattatactatgttatcttaatccgttcctccatcaatgggcatttacgtcatttatttacctcggctattgtgaatactggtgcagtgaattcatcagtgtggatat--ctcttcaagatcttgatttgagttcttttggataattatccggaagttgaaatctggtgtcttatagttcaatttttaacattttgaggaaatgtg i panTro4.chr19 I 4485 C 0 s ponAbe2.chr19 56483097 611 + 60714840 atatgttagtcacctcagttagttattatttctgtgtgcatgtgtgtgtgcagtgaaaatacttaggttctactctcagctaattttaagtgtacaatacagtattgttacctatagttttcattccatacattagttttccagaattattcatcccggagaattgaaactttgcaccttttgaccaacatctcatttttcccatttccagcccctactaaccaccattctactctcagcttctatgaattttactattttagattccacaattatgtgagattataagatatttgtctattaagagctggactcatttcacttagcataatgtcatttgggtccaatcctgctatcgaaaatgatctgattttcttctttttaaagattgaataaaactttatatttattatactatgttatcttaatccattcctccatcaatgggcatttatgtcgtttatttacctcggctattgtgaatactggtgcaatgaattcatcagtgcggatat--ctcatcaagatcttgatttgagttcttttggataattatccggaagttgaaatctcgtggcttatagttcaatttttaacattttgaggaagtgtg i ponAbe2.chr19 I 13457 C 0 s nomLeu3.chr10 103179493 606 - 106955855 atatattaatcacctc----agttattatttctgtgtgcatgcgtgtgtgcagtgaaaatacttaggatctactctcagctaattttaagtgtacaatatagtattgttacctatagttttcgttccatacgttagttttccagaattattcatctcggagaattgaaactttgcaccctttga-caacatctcatttttcccatttccagcccctgctaaccaccattctactctcagcttcgatgaattttactattttagattccacaattatgtgagagtataagatatttatctattaagagctggactcatttcacttagcataatgtcatttgggtccaatcctgctatcacaaatgatctgattttcttctttttaaagactgaataaaacttcatatttattatactatgttatcttaatctgttcctccatcaatggcaatttatgtcatttatttacctcggctattgtgaatactggtgcagtgaattcatcagtgcggatat--ctcttctagatcttgatttgagttcttttggataattacccagaagttgaaatctcgtgtcttgtagttcaatttttaacattttgaggaaatgtg i nomLeu3.chr10 I 4217 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47312737 35992 + 50890351 I e papAnu2.chr19 47632353 29466 + 51301725 I e macFas5.chr19 55548880 41608 + 59248254 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=6546.000000 s hg38.chr19_GL949753v2_alt 374380 13 + 796479 ataccgtttctat s panTro4.chr19 59567470 13 + 63644993 ataccatttctat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56483708 13 + 60714840 ataccgtttctat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103180099 13 - 106955855 ataccgtttttat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55590488 12 + 59248254 ACATTGTCTCTG- i macFas5.chr19 I 41608 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47312737 35992 + 50890351 I e papAnu2.chr19 47632353 29466 + 51301725 I e rheMac3.chr19 60441556 49690 + 64156825 I a score=376418.000000 s hg38.chr19_GL949753v2_alt 374393 228 + 796479 aatggatggatcggtttCTGTTAACTTAAATCAGGGTATTGTCTTTCTCACTCAGACCGCTGCTGGAATCCTTGGAAATTCTTCACTCCTTTACTTTTTTAGCTTTACTTTTATCACTTCACAGATATTGAGACCCAGAGACCTGATTCTCAGCCAGCTGGTCTTAGCCAACAACCTGGTTCTTTTCTCTAAA-CGAATCCCCCAGACAATGGCAGCTTTTGGAATGAA s panTro4.chr19 59567483 228 + 63644993 aatggatggatcggtttCTGTTAACTTAAATCAGGGTATTGTCTTTCTCACTCAGACCGCTGCTGGAATCCTTGGAAATTCTTCACTCCTTTACTTTTTTAGCTTTACTTTTATCACTTCACAGATATTGAGACCCAGAGACCTGATTCTCAGCCAGCTGGTCTTAGCCAACAACCTGGTTCTTTTCTCTAAA-CGAATCCCCCAGACAATGGCAGCTTTTGGAATGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56483721 228 + 60714840 aatggatgGATTGGTTTCTGTTAACTTAAATTAGGGTATTGTCTTTCTCACTCAGACTGCTGCTGGAATCCTTGGAAATTCTTCACTCCTTTACTTTTTTAGCTTTACTTTTATCACTTCACAGATATTGAGACCCAGAGACCTGATTCTCAGCCAGCTGATCTTAGCGAACAACCTGGTTCTTTTCTCTAAA-GGAATCCCCCAGACAATGGCAGCTTTTGGAATGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103180112 228 - 106955855 aatgCATGGATTGGTTTCTGTTACCTTAAATTAGGGTATTGCCTTTCTCACTCAGACTGCTGCTGGAATCCTTGGAAATTCTTCACTCCTTTACTTTTTTAGCTTTACTTTTATCACCTCACAGATATTGAGACCCAGAGACCTGATTCTCAGCCAGCTGTGCTTAGCGAACAACCTGGTTCTTTTCGCTGAA-GGAATCCCCCAGACAACGGCAGCTTTTGGAATGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60491246 229 + 64156825 AATGGATGGATTGGTCTCTGTTAACGTAAATCGGGGTATTGCCTTTCTCATTCAGACTGCTGCTGGAATCCTTGGAAATTCTTTAGTCTTTTACTTTTTTAGTTTTACTTGTATCACTGCACCGATAGTGAGACCCAGAGACCTGATTCTTACCCAGCTGGTCTTAGCAAACAACCTGGTTCTTTTCTCCAAAGGGGATCCCTCAGACCATGGCGGCTTTTGGATTGAA i rheMac3.chr19 I 49690 C 0 s macFas5.chr19 55590500 229 + 59248254 AATGGATGGATTGGTCTCTGTTAACGTAAATCGGGGTATTGCCTTTCTCATTCAGACTGCTGCTGGAATCCTTGGAAATTCTTTAGTCTTTTACTTTTTTAGTTTTACTTGTATCACTGCACCGATAGTGAGACCCAGAGACCTGATTCTTACCCAGCTGGTCTTAGCAAACAACCTGGTTCTTTTCTCCAAAGGGGATCCCTCAGACCATGGCGGCTTTTGGATTGAA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47348729 219 + 50890351 AATGGATGGATTGGTCTCTGTTAACGTAAATCGGGGTATTGCCTTTCTCTTTCAGACTGCTGCTGGAATCCTTGGAAATTCTTCAGTCTTTTACTTTTTTAGTTTTACTTGTATCACTGCACAGATAGTGAGACCCAGCGACCTGATTCTTACCCAGCTGGTCTTA----------TGGCTCTTTTCTCCAAAGGGGCTCCCTCAGACCATGGCGGCTTTTGGATTGAA i chlSab2.chr6 I 35992 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e papAnu2.chr19 47632353 29466 + 51301725 I a score=597552.000000 s hg38.chr19_GL949753v2_alt 374621 286 + 796479 ATCCTTCCTGGACGAGGCTGGATG-AAACTTGTCTTCTATCTATACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCGCCTGTCTCCCCAGTGGCTTCCAGGCCATGAAGCTTCAACCTCAGTATCTCTAGGAGGATGGAACTCCGAATTAGGTCCACAAAGTGCATTGTTTTCTGCTGCCCCCTCTGCTGGATCTTGCAAATTGTGGCATATACCCATATTGCAATGCATGTAACTGGCCCAATGAAGAGCAAAAACGTGAGTATGGAATAAATGTATAGGTACT s panTro4.chr19 59567711 285 + 63644993 ATCCTTCCTGGACGAGGCTGGATG-AAACTTGTCTTCTATCTATACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCGCCTGTCTCCCCAGTGGCTTCCAGGCCATGAAGCTTCA-CCTCAGTATCTCTGGGAGGATGGAACTCCGAATTAGGTCCACAAAGTGCATTGTTTTCTGCTGCCCCCTCTGCTGGATCTTGCAAATTGTGGCAAATACCCATATTGCAATGCATGTAACTGGCCCAATGAAGAGCAAAAACGTGAGTATGGAATAAATGTATAGGTACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56483949 284 + 60714840 ATCCTTCCTGGATGAGGCTGGATT-AAACTTGTCTTCTATCTATACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCACCTGTCT-CCCAGTGGCTTCCAGGCCATGAAGCTTCA-CCTCAGTATCTCTGGGAGGATGGAACTCCAAATTAGGTCCACAAAGTGCATTGTTTTCTGCTGCCCCCTCTGCTGGATCTTGCAAATTGTGGCAAATACCTATATTGCAATGCATGTAACTGGCCCAATGAAGAGCAAAAAAGTGAGTATGGAATAAATGTATAGGTACT i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103180340 285 - 106955855 ATCCTTCCCGGACGAGGCTGGATT-AAACTTGTCTTCTATCTATACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCACCTGTCTCCCCAGTGGCTTCCAGGCCATGAAGCTTCA-CCTCAGTATCTCCGGGAGGGTGGAACTCTGAATTGGGCCCACAAAGTGCATTGTTTTCTGCTGCTCCCTCTGCTGGATCTTGCAAATTGTGGCAAATACCCGTATCGCAATGCATGTAACTGGCCCAATGAATAGCAAAAACGTGAGTATGGAATAAATGTATAGGTACT i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60491475 284 + 64156825 ATCCTTCCTGGATGAGGCTGGATGTAAACTTGTCTTCTATC--TACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCACCTGCCTCCTCAGTGGCTTCCAGACCATGAAGCTTCA-TCCCAGTATCTCTGGGAAGGTGGAACTCCTAATTAGATCCCCAGAGTTTATTGTTTTCAGCTGTTTTATCTGATGAATCTTGCATCTTGTATTAAACATCAATATTGCAAAGTATGTAACTGTCCCAACAAATAGCAAAAACATAAGTATGAAAAATATATAGAGGTACT i rheMac3.chr19 C 0 I 133 s macFas5.chr19 55590729 284 + 59248254 ATCCTTCCTGGATGAGGCTGGATGTAAACTTGTCTTCTATC--TACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCACCTGCCTCCTCAGTGGCTTCCAGACCATGAAGCTTCA-TCCCAGTATCTCTGGGAAGGTGGAACTCCTAATTAGATCCCCAGAGTTTATTGTTTTCAGCTGTTTTATCTGCTGGATCTTGCATCTTGTATTAAACATCAATATTGCAAAGTATGTAACTGTCCCAACAAATAGCAAAAACATAAGTATGAAAAATATATAGAGGTACT i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47661819 284 + 51301725 ATCCTTCCTGGATGAGGCTGGATGTAAACTTGCTTTCTATC--TACACAGAGAGGCCAGAGGGGTTTCCCTCAGCACCACCTGCCTCCTCAGTGGCTTCCAGACCATGAAGCTTCA-TCCCAGTGTCTCTGGGAAAGTGGAACTCCAAATTGGATCCCCAGAGTTTATTCTTTTCAGCTGTTTTATCTGCTGGATCTTGCATCTCGTGTTAAATATCAATATGGCAAAGTATGTAACTGTCCCAACAAATAGCAAAAACATaagtatgaaaaatatataaagctacT i papAnu2.chr19 I 29466 I 1 s chlSab2.chr6 47348948 284 + 50890351 ATCCTTCCTGGGTGAGGCTGGATGTAAACTTGTCTTCTATC--TACACAGAGTGGCCAGAGGGGTTTCCCTCAGCACCACCTGCCTCCTCAGTGGCTTCCAGACCATGAAGCTTCA-TCGCAGTATCTCTGGGAAGGTGGAACTCCAAATTGGATCCCCAGAGTTTATTCTTTTCAGCTGTTTTATCTGCTGGATCTTGCATCTCATGTTAAATATCAATATTGCAAAGTATGTAACTGTCCCAACAAATAGCAAAAACATAAGTATGAAAAATATATAAAGCTACT i chlSab2.chr6 C 0 I 134 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T a score=125376.000000 s hg38.chr19_GL949753v2_alt 374907 135 + 796479 CTCCTCACCCATTCTAGGATGATTGCTATTCTTAGCAAAT-GCAGTCATTTTCTCCCTTGTGGATGGTATGTCTTTGGCCCTCATGGACTACACCAGCAGCTCCATGATCCTCTTCTTATATAGACACAAGCAGAC s panTro4.chr19 59567996 135 + 63644993 CTCCTCACCCATTCTAGGATGATTGCTATTCTTAGTAAAT-GCAGTTATTTTCTCCCTTGTGGATGGTATGTCTTTGGCCCTCATGGACTACACCAGCAGCTCCGTGATCCTCTTCTTATATAGACACAAGCAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484234 135 + 60714840 CTCCTCACCCATTCTAGGATGATTGCTATTCTTAGTAAAG-GCAGTTATTTTCTCCCTTGTGGATGGTATGTCTTTGGCCCTCGTGGACTACACCAGCAGCTCCATGATCCTCTTCTTATATAGACACAAGCAGAC i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103180626 136 - 106955855 CTCCTCACCCATTCTAGGACGATTGCTCTTCTTAGTAAAGAGCAGTTATTTTCTCCCTCATGGATGGCATGTCTTTGGCCCTCATGGTCTACACCAGCAGCTCCATGGTCCTCTTCCTGTATAGACACAAGCAGAG i nomLeu3.chr10 I 1 C 0 s macFas5.chr19 55591014 133 + 59248254 TTTCACACCCACTTCAAGGACATTTATATTCTCAGGAATT-GCAGTCATTTTCTCTTTCACGGATGGTA-GTCTTTGGCCTTCATGGTCTGGACCAGCTGCTCTGTGATTTTTGTTCTGTATCAGTATAAGCAGA- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47662104 134 + 51301725 TTTCACACCCACTTCAAGGACATTTATATTCTCAGGAATT-GcagtcattttctctttcatggaTGGTATTTCTTTGGCCTTCATGATCTGGACCAGCTGCTCTGTGATTTTTGCTCTGTATCAGTATAAGCAGA- i papAnu2.chr19 I 1 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349232 134 + 50890351 I e rheMac3.chr19 60491759 133 + 64156825 I a score=735848.000000 s hg38.chr19_GL949753v2_alt 375042 345 + 796479 AGTCCAATGCATTCGCAGCCACGGCCTCTCCCCCTGAAAATCTCATGAAACTAGAGCCACACACACCATCCTCGTCCTGGTGAGCATGTTTGTCTCCTCTCATGGTCTAGCTGGTATTTTATCACTGTGGGTAACCTGGATTCAGAACCCAAGCCATTGGCTGAGAAGCATCTCTTTCCTGGTGTCTGCAGGATTCCCGACATTCAGCCCCTTTGGGTTCATTGTCAGTGATGCCCGCGTCTCACAGTTCTGCACTGTCTGCTGGACAAGGAAGACAAATGCTCCAAGTGTGGTCTCTGGGCTCTAAGTTCCCTCTAGACAATTGCGTCCTTTATTTAATCACTT s panTro4.chr19 59568131 345 + 63644993 AGTCCAATGCATTCGCAGCCACGGCCTCTCCCCCTGAAAATCTCATGAAACTAGAGCCACACACACCATCCTCGTCCTGGTGAGCATGTTTGTCTCCTCTCATGGTCTAGCTGGTATTTTATCACTGTGAGTAACCTGGATTCAGAACCCAAGCCATTGGCTGAGAAGCATCTCTTTCCTGGTGTCTGCAGGATTCCTGACATTCAGCCCCTTTGGGTTCATTGTCAGTGACACCCAAGTCTCACAGTTCTGCACTGTCTGCTGGACAAGGAAGACAAATGCTCCAAGTGTGGTCTCTGGGCTCTAAGTTCCCTCTAGACAATTGCGTCCTTTATTTAATCACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484369 345 + 60714840 AGTCCAATGCATTCGCAGCCACAGCCTCTCCCCCTGAAAGTCCCATGAAACTAGAGCCACACACACCATCCTCATCCTGGTGAGCATGTTTGTCTCCTCTCATGGTCTAGCTGGTATTTTATCATTGTGGGTAACCTGGATTCAGAACCCAAGCCATTGGCTGAGAAGCATCTCCTTCCTGGTGTCTGCAGGATTCCCGACATTCAGCCCCTTTGTGTTCATTGTCAGTGACACCTGCGTCTCACAGGTCTGCACTGTCTGCTGGACAAGGAAGACAAATGCTCCAAGTGTGGTCTCTGGGCTCTAAGTTCCCTCTGGACAATTGCGTCCTTTATTTAATCACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103180762 345 - 106955855 AGTCCAATACATTTGCAGCCACAGCCTCTCCCCAAGAAAGTCTCATGAAACTAGGGCCACACACACCATCCTCATCCTGGTGAGCATGTTTGTCTCCTCTCATGGTCTAGCTGGTATTTTATCATTGTGGGTGACCTGGATTCAGAACCCAACCCATTGGCTGAGAAGCATCTCTTTCCTGGTGTCTGCAGGATTCCCGACATTCAGCCCCTTTGGGTTCATTGTCAGTGACACCCGCGTCTCACAGTTCTGCACTGTCTGCTGGACAAGGAAGACAAATGCTCCAAGTGTGATCTCTGGGCTCTAAGTTCCCTCTGGACAATTGCATCCTTTATTTAGTCACTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60491892 345 + 64156825 AGTCCAACATATTCGCAGCCACAGCCTCTTCCCCAGAACTTCTCATGAAACTAGAGCCACATACGTTATTCTGATCTGGGTGAGTATGTTTGTCTCCTTTCATGCTCTCATTTCTATTTTATCATATTTGATAACCCAGATTCAGAACTCAAGCCATTGGCTAAGGAACATCTCTTTCCTGCTATCTGGAGGATTCCCGACATTCAGCCCCTTTGTGTTCATTGTCACGGACACTCGAGTCTCACAGTTCTGCTTTGCCTACTGGACGAGGAAGACAAAGGCTCCAGATATGGTATCTGGGCTCTAAGTTTCCTCTACAACATTGCATCATTTATTTAATCACTT i rheMac3.chr19 I 133 I 47 s macFas5.chr19 55591147 344 + 59248254 -GTCCAACATATTCGCAGCCACGGCCTCTTCCCCAGAACTTCTCATGAAACTAGAGCCACATACGTTATTCTGATCTGGGTGAGTATGTTTGTCTCCTTTCATGCTCTCATTTCTATTTTATCATATTTGATAACCCAGATTCAGAACTCAAGCCATTGGCTAAGGAGCATCTCTTTCCTGCTATCTGGAGGATTCCCGACATTCAGCCCCTTTGTGTTCATTGTCACGGACACTCGAGTCTCACAGTTCTGCTTTGCCTACTGGACGAGGAAGACAAAGGCTCCAGATATGGTATCTGGGCTCTAAGTTTCCTCTACAACATTGCATCATTTATTTAATCACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47662238 344 + 51301725 -GTCCAACATATTCGCAGCCACAGCCTCTTTCCCAGAACTTCTCAAGAAACTAGAGCCACAGACATTATTCTGATCTGGGTGAGTATGTTTGTCTCCTTTCATGCTCTCACTTCTATTTTACCATATTTGATAACCCAGATTCAGAACCCAAGCCATTGGCTAAGGAGCATCTCTTTCCTGCTATCTGGAGGATTCCCAACATTCAGCCCCTTTGTGTTCATTGTTACGGACACTCGAGTCTCACAGTTCTGCTTTGCCTACTGGACGAGGAAGACAAAGGCTCCAGATATGGTATCTGGGCTCTAAGTTTCCTCTAGAACATtgcatcatttatttaatcactT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47349366 345 + 50890351 AGTCCAACATATTCGCAGCCACAGCCTCTTTCCCAGAACTTCTCATGAAACTAGAGCCACAGACATTATTCTGATCTGGGTGAGTATGTTTGTCTCCTTTCATGCTCTCACTTCTATCTTATCATATTTGATAACCCAGATTCAGAACCCAAGCCATTGGCTAAGGAGCATCTCTTTCCTGCTGTCTGGAGGATTCCCGACATTCAGCCCCTTTACGTTCATTGTCACAGACACTCGAGTCTCACAGTTCTGCTTTGCCTACTGGACAAGGAAGACAAAGGCTCCAGATATGGTACCTGGGCTCTAAGTTTCCTCCAAAACATTGCATCATTTATTTAATCGCTT i chlSab2.chr6 I 134 T 36504 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T a score=41027.000000 s hg38.chr19_GL949753v2_alt 375387 47 + 796479 CTCCCCACAATATCTGTTGGATCATACATTATGCCAGTTAATACGCA s panTro4.chr19 59568476 47 + 63644993 CTCCTCACAATATTTGTTGGATCATACATTATGCCAGTTAATATGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484714 47 + 60714840 CTCCTCACAATATTTGTTGGATCATACATTATGCCAGTTAATATGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181107 47 - 106955855 CTCCTCACAGTATTTGTTGGATCATACATTATGCCAGCTAATATGCA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55591491 47 + 59248254 TCTTTCTCAATATATGTAGCCTCTTGCATTATGCCAGTCAGCGTGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47662582 47 + 51301725 TCTCTCTCAATATATGTAACCTCTTGCATTATGCCAGTCAGCATGAC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T e rheMac3.chr19 60492237 47 + 64156825 I a score=63312.000000 s hg38.chr19_GL949753v2_alt 375434 40 + 796479 AGGACTTTGGGACTCAGTATTGAATAAAAATGATAATAAC s panTro4.chr19 59568523 40 + 63644993 AGGACTTTGGGACTCAGTATTGAATAAAAATGATAATAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484761 40 + 60714840 AGGACCTTGGGACTCAGTATTGAATAAAAATGATAATAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181154 37 - 106955855 AGGACTTTGGGACTCAGTATTGAATAAAAATG---ATAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60492284 40 + 64156825 AGGACTTTGGGATTCATTACTGAATAAAAATAATAATAAC i rheMac3.chr19 I 47 T 50333 s macFas5.chr19 55591538 40 + 59248254 AGGACTTTGGGATTCATTACTGAATAAAAATAATAATAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47662629 40 + 51301725 AGGACTTTGGGATTtattacttaataaaaataataataat i papAnu2.chr19 C 0 I 3 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T a score=13098.000000 s hg38.chr19_GL949753v2_alt 375474 13 + 796479 CATAGCCTCATAT s panTro4.chr19 59568563 13 + 63644993 CATAGCCTCATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484801 13 + 60714840 CATAGCCTCATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181191 13 - 106955855 CATAGCCTCATAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55591578 13 + 59248254 AGTGGCTTCATGT i macFas5.chr19 C 0 T 42299 s papAnu2.chr19 47662672 13 + 51301725 agtggcttcatat i papAnu2.chr19 I 3 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=7026.000000 s hg38.chr19_GL949753v2_alt 375487 8 + 796479 TGCTTCTT s panTro4.chr19 59568576 8 + 63644993 TGCTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484814 8 + 60714840 TGCTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181204 8 - 106955855 TGCTTCTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47662685 8 + 51301725 tgcttttt i papAnu2.chr19 C 0 T 29919 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=123929.000000 s hg38.chr19_GL949753v2_alt 375495 247 + 796479 AGGCTCTCAAAAAATGAACGCAGTGTAAAAATTACCCAGATgtatgtcagttcctcagaagattaaacacagaattaccatatgacccggcaatttctgggaaaattaaagcaaggatttaaaaggatgctcatatactcatgttcataacagcgttattcacattaacaaaaaagtagaaaaaacccaaagatggataaatggataaacaaatgttatagaaactaggaaatactgttcagtctct s panTro4.chr19 59568584 247 + 63644993 AGGCTCTCAAAAAATGAACATGGTGTAAAAATTACCCaaacgtatgtcagttcctcagaagatttaacatagaattaccatatgacctggcaatttctgggaaaattaaagcaaggatttaaaaggatgctcatatactcatgttcataacagcgttattcacattaacaaaaaagtagaaacaacccaaagatggataaatggataaacaaatgttatacaaactagggaatactgttcagtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56484822 245 + 60714840 AGACTCTCAAAAAATGAACACAGTATAAAAATTACCCAAATgtatgtcagttcctcagaagattaaacatagaattaccatatgacctggcaatttctgggaaaattaaagcaaggatttaaagggatgctcatatactcatgttcat-acggcgttattcacattaac-aaagagtagaaacaacccaaagatggataaatggataaacaaatgttatacaaactacaaaacactgttcagtctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181212 247 - 106955855 AGACTCTCAAACAATGAACACGGTGTAAAAATTACCCAAATgtatgtcagttcctcagaagattaaacatagaattaccatatgacctggcaatttctgggaaaattaaagcaaggatttaaagggatgctcatatactcatgttcataacagcgttattcatattaacaaaaaagtagaaacaacctaaagatggataaatggatgaacaaatgttttacaagctatgaaatgctgttcagtctCT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T e papAnu2.chr19 47662693 29919 + 51301725 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=524259.000000 s hg38.chr19_GL949753v2_alt 375742 2106 + 796479 caaagaaatgaaattgtgactgacatacactataatatggagagccttgaagatattatgctaagtgaaataagccagtctcataaaggacaaatattgcaaatattgctaagattctatctatatgagctacct------gtcaaactcacagactcaggaagtagaatcacggttaacagaggcttgggggcctggaaactgagagttggtgtttactgaatataaagcttcaatt-ggaaagataaaatactttggggatggtgatggcgatggttgcatagcaatgtcaaaccacttcacaatactgcactgtagagttagaaagagtaaatatggtaaattttatttcatttgtttttttttttactataatttaaaaTGAGAAAGAGTAGTAAAAACACACAAAAGAGAGGAGCTAACAGATAAAAAGTGCACTAAGTTAGCCAAGCCAGAGCTTTAAGAACCATTATCACTTCTCTCTCTCTTTCACCCCACAATCAACATTAATCAGGTCCAACCATGTGTTCTGCCTTCTTAGCACTGCTCACGTGTGTCCCCTCCTCTCTTATTTCCATGCACTCTGGCCCAGCTGGGCTTCTTCTCTCTTTGCCTGTGATTTGCTCTGTTGTCCTCCCTGGCTCAGACGTGCAGTCCCAGTCTCTCCTGATGCTTTGTCCCCACATTGAGGGCACTGCTGTTTCCCCACAGGCCACTCCtttttttttttttt-----tcttgagacagagtcttactctgtcacctaggctggagtgcaatggcacgatctcggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtatacaccaccacacccagataattttttgtattttttttagagacagggtttcactgtgttggccaggctggtctcgaactcctaacctcgtaatcctcccacctcagcctcccaaagtgctgAActcctaatacaccctctgtcctttcccaccttgtctgtgccctggaggctgactctatggattgcatcatcagtgtctccttgcctttagcgtctgattgagttcaaccatgg-aggcactgtcaggagagcagagggtgagaggagagagaggccggggaatcaattcccacacatatgccctgccaggctgtggtttgtcagcaactgtgctcctctacccatgacatcagctcccgcaaggcacctcccatctcccacacagggctctctccaccccttgacctcccatcctgggagtggcagtggcttcctgGGGTGCTTCATCCCTCTCATTTGCCCACACCTTTATACACTTCtttttcttttttcttttcttttttttttttttttttttgacggagtctcactctgtcacc-aggctggagggcagtggcaccatctcagctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctccaaagtagctgggattacaggcgcccg------------gctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggttttgatctcctgaccttgtgatccacccgcctgggcctcccaaagtgctgggattacaggcgtgagccacc-gcgcccggccTATACACTGCtttttctatttccattttt-attttagaattgggggtacatgtgtaggtttgttaccaaggaatattgtgtggcattgaggtttggagtaagactgagcccctcacccaggtagggagcatggtacccaacaggtagtttttcagccccatccccctc---ctctccaccctcagtggtccccagcgtctactgttgccatctttatgggaagatgtgtacctaatatttagctcccacttataagtgagaatatgtggtatttggtgttcagtttctacattagtttacgtaagataatggcctccagctgcatccatgttgctgcaaaggacatgagttcattcttttttatggctgtgtagtcttccatggtgtatatggaccacattttctttatttggttcactgttgatgggcaacgaggttgattccatgtcttttctattgtcaata s panTro4.chr19 59568831 2108 + 63644993 caaagaaatgaaattgtgactgacatacactataatatggagagccttgaagatattatgctaagtgaaataagccagtctcataaaggacaaatattgcaaatgttgctaagattctatctatacgagctacctagattggtcaaactcacagactcaggaagtagaatcacggttaacagaggcttgggg-cctggaaactgagagttggtgtttactgaatataaagcttcaatt-ggaaaga--aaatactttggggatggtgatggtgatggttgcacagcaatgtcaaaccacttcacaatactgcactgtagagttagaaagagtaaatatggtaaattttattttattt--------ttttactgtaatttaaaaTGAGAAAGAGTAGTAAAAACACACAAAAGACAGGAGCTAACAGATAAA--GTGCACTAAGTTAGCCAAGCCAGAGCTTTAAGAACCATTATCACTTCTCTCTCTCTTTCACCCCACAATCAACATTAATCAGGTCCGACCATGTGTTCTGCCTTCTTAGCACTGCTCACGTCTGTCCCCTCCTCTCTTATTTCCATGCACTCTGGCCCAGCTGGGCTTCTTCTCTCTTTGCCTGTGATTTGCTCTGTTCTCCTCCCTGGCTCAGACGTGCAGTCCCAGTCTCTCCTGATGCTTTGTCCCCACATTGAGGGCACTGCTGTTTCCCCACAGGTCACTCTGGttttgtttgtttgtttgttttgagatagagtctcactctgtcacccaggctggagtgcaatggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtatacgccaccacgcccagctaattttttgtgtttttagtagagacggggtttcaccatgttggccaggctggtcttgaactcctaacctcgtaatcagcccacctcagcctcccaaagtgctgAActcctaatataccctctgtcctttcccgccttgtctgtgccctggaggctgactctatggattgcatcatcaatgtctccttgcctttagtgtctga----gttcaaccatgggaggcactgtcaggagagcagagggtgagaggagagagaggccagggaatctattcccacacatacatcctgccaggctgtggtttgtcagcaactgagctcctctacccatgacatcagctcccacgaggcacctcccatctcccacacagagctctctccaccccttgacctcccatcttgggagtggcagtggcttcctggggtgcttcatccctctcatttgcccacatcttcataCACTTGttttc----tttctttt--tttttttttttttttttttgaccgagtctcgctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctctgcctcccaggttcacgccattctcctgcctcagcctccagagtagctgggactacaggtgcccgacaccacacccagctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacattgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccacc-gcgcctggccTATACACTTCttttactatttccattttttattttagaattgggggtacatgtgtaggtttgttaccaaggaatattgtgtggcattgaggtctggagtaagactgaacccctcacccaggtagggagcatggtacccaacaggtagtttttcagccccatccccctc---ctctccaccctcagtggtccccagcgtctaccgttgccatctttatgggaagatgtgtacctaatatttagctcccacttataagtgagaatatgtggtatttggtgttcagtttctacattagtttacgtaagataatggcctccagctgcatccatgttgctgcaaaggacatgagttaattcttttttatggctgtgtagtattccatggtgtatatggac-acattttctttattcggttcactgttgatgggcaacgaggttgattccatgtcttttctattgtcaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56485067 2099 + 60714840 aaaagaaatgaaattgtgactgacatacactataatatggagagccttgaagatattatgctaagtgaaataagccagtctcataaaggacaaata---------ttgctaagattctatctatacaagctacctagattggtcaaactcgcagactcaggaagtagtgtcatggttaacagaggcttgggggcctggaaacggagagttggtgtttactgaatataaagtttcaactgggaaagagaaaacattttggggatgctgatggtgatggttgcacagcaatgtcaaaccacttcacactactgtactgtagagtgagaaatagtaaatacggtaaattttattttatgtggttt---tttttcgataatttaaaaTGAGAAAGAGTAGTAAAAACACACAAAAGAGAGGAGCTAACAGATAAA--GTGCACTAAGTTAGCCAAGCCAGAGCTTTAAGAACCATTATCACTTCTCTCTCTCTTTCACCCCACAGTCAACATTAATCAGGTCTGACCATGTGTTCTGCCTTCTTAGCACTGCTCACGTGTGTCCCCTCCTCTGTTATTTCCGTGGTCTCTGGCCCAGCTGGGCTTCTTCTCTCTTTGCCTGTGATTTGCTCTGTTCTCCTCCCCGGCTCAGACGTGCAGTCCCAGTCTCTCCTGATGCTTTGTCCCCACATTGAGGGCACTGCTGTTTCCCCACAGGTCACTCTGGttttgtttgttt----gttttgagacagagtctcactctgtcacccaggctggagtgctgtggcgcaatctcggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtatacgccaccacgcccagctaattttttgtgtttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctaacctcgtaatcagcccacctcggcctcccaaagtgctgAActcctaatacaccctctgtcttttcccgccttgtctgtgccctggaggctgactctatggattgcatcatcagtgtctccttgcctttagtatctga----gttcaaccatgggaggcactgtcaggagagcagagggtgagaggagagagaagccagggaatctattcccacacgtacctcctgccaggctgtggtttgtcagcaactgtgctcctctacccatgacatcagctcccacgaggtacctcccatctcccacacagagctctctcctccccttgacctcccatcttgggagtggcagtggcttcctgGGGTGCTTTATCCCTCTCATTTGCCCACATCTTCATACACTTGttttc----tttctt----tttttttttttttttttttgacggagtcttgctctgttgcccaggctggagtgcagtgggacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccaagtagctgggactacaagcacccgacaccacgccaggctaattttttgtattttaagtagggacagggtttcaccatgttagccaggatagtctcgatct-ctgaccttgtgattcgcccgcctcggcctcccaaagtgctgggattacaggcatgagccacctgtgcctgcccTATACAATTCtttttctattttcattttc-attttagatttgggggtacgtgtgtaggtttgttaccaaggaatattgtgtcgcattgaggtttggagtaagactgagcccctcacccaggtagggagcatggtacccaacaggtagtttttcagccccagcctcctccctctctccaccttcagtggttcccagcgtctactgttgccatctttatgggaagatgtgtacctaatatttagctcccacttataagtgagaacatgtggtatttggtgttcagtttctacattagtttacttaagataatggcctccagctgcatccatgttgctgcaaaggacatgagttcattcttttttgtggctatg------tccatggtgtatatggaccacattttctttattcggttcactgttgatgggcaactgggttgattccatgtctttgctattgtcaata i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e nomLeu3.chr10 103181459 0 - 106955855 C e chlSab2.chr6 47349711 36504 + 50890351 T e papAnu2.chr19 47662693 29919 + 51301725 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=332361.000000 s hg38.chr19_GL949753v2_alt 377848 656 + 796479 gtgctgcaatgatcat-ccaagtgtgtgtgttcttgactagaatgatttattttccctggatatatacccagtaataggactcctgggtcaaatggtagttccattcctagttatttgagatatcctcaaactgctctccacggcgactgTtagtcctagctctttgagaagccaaggtgggaggattgcttgaggccaggagtttggggccaTTCGATTCTCTAACTACTACCCCTGC---TGTATAGAAATGTCATTGATATGGATTTGTTTTTATTTTCTTATAAATCCTAATGGACtttgaattttctatttagagaatcttactacctacaagtaatgaaaaa----atctctctagccctcatatatcttatttttagttttttacttttactgatattattacatcagttaggacacctcagtagaaaatggaataaaagtggaaagaccattaagcctcgttttgttcatattttagtggaaattgatctaagcttcatcattaaatataatatttgctattgatttgttgctgggcatcctttaacatgtttatgatgtttcattctattcctaattcattaagattttttaaaccataaataag---tgCAGATTATAGTAATATTGAGCAAATATTTTCTTCTCACCTCCAATGGG s panTro4.chr19 59570939 655 + 63644993 gtgctgcaatgatcat-ccaagtgtgtgtgttcttgagtagaatgatttattttccctggatatatacccagtaataggactcctgggtcaaatggtagttccattcctagttatttgagatatcctcaaactgctctccacagtgactgTtagtcccagctctttgagaagccaaggtgggaggattgcttgaggccaggagtttggggccaTTCGATTCTCTAACTACTACCCCTGC---TGTATAGAAATGTCATTGATTTGGATTTGTTTTTATTTTCTTATAAATCCTAATGGACtttgaattttctatttagagaatcttactgcctacaagtaatgaaaaa----atctctctagccctcatatatcttattttta----tttacttttactgatattattacatcagttaggatgcctcagtagaaaatggaataaaagtggaaagagcattaagccttgttttgttcatattttagtggaaattgatctaagcttcatcattaaatataatatttgctattggtttgttgctgggcatcctttaacatgtttatgatgtttcattctattcctaattcattaagattttttaaaccataaataagAAGTGCAGAGTATAGTAATATTGAGCAAATATTTTCTTCTCACCTCCAATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56487166 667 + 60714840 gtgctgcaatgatcatgcaaagtgcatgtgttcttgagtagaacgatttattttccctggatatatagccagcaatgggattcctgggtcaaatggtagttccattcctagttattggagatatcctcaaactgctctccacaatgacAGTtaatcccagctctttgagaagccaagatgggaagattgcttgaggccaggagtttggggccaTTCGattctctaactactactgctgctgttgtatagaaatgtcattgatttggatttgtttttattttcttataaatcctaatggactttgaattttctatttagagaatcttattgcctacaagtaatgaaaaaaaatatctctttaggcctcatatatcttatttttagttttttacttttactgatattattacatcagttaggacacctcagtagaaagtggaataaaagtggagagagcattaagccttgttttgttcatattttagtggaaattgatctaagcttcatcattaaatataatatttgctattggtttgtcgctgggcatcctttaacatgtttatgatgtttccctctattcctaatttattaagattttttaaaccataaataagAGGTACAGATTATAGTAATATTGAGCAAATATTTTCTTCTCACCTCCAATGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181459 658 - 106955855 gtgctgcaatgataat-ccaagtgggtgtgttcttgagtagaatgatttattttccctggatatacacccagcaatgggattcctgggtcaaatggtagttcaattcctagttatctgagatatcctcaaactgctctcctcagggactgTtaatcccagctctttgagaagccaaagtgggaggattgcctgaggccaggagtttcgggccaTTCGATTCTCTAACTACTACCGCGGC---TGTATAGAAATGTCATTGATTTGGATTTGTTTTTATTTTCTTATAAATCCTAATGGACtttgaattttctatttagagaatcttactgcctacaagtaatgaaaaa----atctctctagctctcatatatcttatttttagttttttacttttattgatattattacatcagttagcacacctcagtagatcgtggaacaaaagtggagagagcattaaaccttgttttgttcata-tttagtggaaattgatctaagcttcatcattaaatataatatttgctattggtttgttgctgggcatcttttaacatgtttatgatgtctcattctattcctaatttattaagattttttaaaccataaataagAAGTGCAGATTATAGTAATATTGAGCAAATATTTTCTTCTCACCTCCAATGGG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e calJac3.chr22 3636913 80641 - 49145316 T e chlSab2.chr6 47349711 36504 + 50890351 T e papAnu2.chr19 47662693 29919 + 51301725 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=21985.000000 s hg38.chr19_GL949753v2_alt 378504 33 + 796479 CCACCCTC-TAGACCCCCTACCCTCACCCTCATC s panTro4.chr19 59571594 34 + 63644993 CCACCCTCATAGACCCCCTACCCTCACCCTCATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56487833 34 + 60714840 CCATCCTCATAGATCCCCTCCCCTCACCCTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103182117 34 - 106955855 CCATCCTCATAGACCCCCTACCCTCACCCTCATC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 3556272 33 - 49145316 CCATCCCCACAG-CCCCACATCCTCACCCTCCAC i calJac3.chr22 T 80641 C 0 e canFam3.chr1 19906120 14827 - 122678785 T e chlSab2.chr6 47349711 36504 + 50890351 T e papAnu2.chr19 47662693 29919 + 51301725 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=412809.000000 s hg38.chr19_GL949753v2_alt 378537 453 + 796479 T--CCCCTAC---CTCACCGCGGGTCTCTGTC-CTCAGACCCCTGCTGCAGGGGACCCCT-GGAGGTGACATATGCTCAGCTGGAC-------CACCAGGCCTTCACTTGGAGGACAGCCCAGGCTGTGTCCCCAGAGTCCATGGTGCCCATGGCTGAGTCTAGCATGTACACAGCCCTCGCCAGGCACTGACTCCGGGACCA-CTGCCCCCTGCGCCTG-------AGGAAGTCATGCTTGGAAAAGCCTCAAGAAGCCATCTGGAGGGCTTCCCCTTGGAATCATCCTGGTCTGCAAAA----C----CAGTCAACTGTTCTGGAGATAAGAGGTAGAGCCCAAAGTTCTCTAGTCAGCATCTAGAAAGTTCATTAACCAGGTGATTCCTTCCACAACTGACCAGCACCTCAAAGAGGTGGCATTGCAGCTACTTCTAGAAACCCAGCTGCAATCACCTGGCTGTTTCCAGACACCTAGTT s panTro4.chr19 59571628 460 + 63644993 T--CCCCTAC---CTCACCGTGGGTCTCTGTC-CTCAGACCCCTGCTGCAGGGGGCCCCC-GGAGGTGACGTATGCTCAGCTGGATGTATGCTCACCAGGCCTTCACTTGGAGGACAGCCCAGGCTGTGTCCCCAGAGTCCACGGTGCCCATGGCTGGGTCTAGCGCATACACAGCCCTTGGCAGGCACTGACTCCGGGACCA-CTGCCCCCTGCGCCTG-------AGGAAGTCATGCTTGGAAAAGCCTCAAGAAGCCATCTGGAGGGCTTCCCCTTGGAATCATCCTGGTCTGCAAAA----C----CAGTCAACTGTTCTGGAGATAAGAGGTGGAGCCCAAAGTTCTCTAGTCAACATTTAGAAAGTTCATTAACCAGGTGACTCCTTCCACAACTGACCAGCACCTCAAAGAGGTGGCATTGCAGCTACTTCTAGAAACCCAGCTGCAATCACCTGGCTGTTTCCAGACACCTAGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56487867 453 + 60714840 T--CCCCTAC---CTCACCGTGGGTCTCTCTC-CCCAGACCCCTTCTGCAGGGGGCCCCC-GGAGGTGATGTATGCTCAGCTGGAC-------CACCAGGCCTTCACTTGGAGGATAGCCCAGGCTGTGTCCCCAGAGTCCACGGTGCCCATGGCTGAGTCTAGCACATACACAGCCCTTGCCAGGCACTGACTCCGGGACAA-CTGCCCCCTGTTCCTG-------AGGAAATCTTGCTTGGAAAAGCCTCAAGAAGACATCTGGAGGGCTTCCCTTTGCAATCATCCTGGTCTGCAAAA----C----CAGTCAACTCTTCTGGAGATAAGAGATAGAGCCCAAAGTTCTCTAATCGGCATCTAGACAGTTCATTAACCAGGTGATTCCTTCCACAACTGACCAGCACCTCAAAGAGGTGGTGTTGCAGCTACTTCTAGAAACCCAGCTGCAATCACTTGGCTGTTTCCAGACACCTAGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103182151 453 - 106955855 T--CCCCTAC---CTCACTGTGGGTCTCTCTC-CCCAGACCCCTGCTGCAGGGGACCCCC-GGAGGTGATGTATGCTCAGCTGGAC-------CACCAGGCCTTCACTCGGAGGACAGCCCAGGCTGTGTCCCCAGAGTCCACGGTGGCCATGGCCAAGTCTAGCACGTACACAGCCCTCGCCAGGCACTGACTCTGGGACCA-CTGCCCCCTGCGCCTG-------AGGAAGTCATGCTTGGAAAAGCCTGAAGAAGCCACCTGGAGGGCTTCCCCTTGGAATCATCCTGGTCTGCAAAA----C----CAGTCAGCTCTTCTGGAGATAAGAGGTAGAGCCCAAAGTTCTCTAGTCGGCATCTAGAAAGTTCATTAACCAGGTGATTCCTTCCACAACTGACCAGCACCTCAAAGAGGTGGTGGTGCAGCTACTTCTAGAAACCCAGCTGCAATCACCTGGCTGTTTCCAGACACCTCGTT i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 3556305 445 - 49145316 CAGCCTCTCC---GTCACCCTGGCTCTCTCTCTCCCAGGCCCCGACTGCAGAGGGCCCCCAGGAGGTGACATATGCTCAGCTGGAC-------CACGGGGCCCTCACACGCAGGACAGCCCAGGCTGTGTCCACAGA---------GCCCTTGGCCGAGGCCAGCATGTACGCAGCCATTGTCAAACGCTGACCCCAGGGCCACCTGGCCTCTACACCTG-------GAGA-----CTCTAGGAAAAGCCTGAAGCAGCCCTTTGGAAGGCTTCGGCTTGGACTCATCCTCGTCTGGAAAGGCTCC----CAGGCAGA---TCTGGAGACAAGAGCTGGAGCCTGGAGGTTTCTAACCGGCATGCGGAAGGCTCATTAGCCAGCTGGTCCCTTCTGCAATTGAGCAGCTCCTTGGACAGACTGTCTCTCAGCTGATTCCAGAGACCCAGGTACAGTTACCTGGCTGTTTCTAGAGACCCAGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921152 468 + 122678785 T--CCCCTACCTTCTCACC-TGGGTCTCTCTCTCTCAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGAC-------CACCACATCCTCACACAGAGGACAGCTCCAGCCACATCCCCACAGTCTGTGGAGCCCATGGCTGAGTCCAGTACATATGCAGCCCTTGCCAGACACTGACTCCATGCCCACCTCGCCTCTGCTCCTAGACGCATGGGGCGTCATTCCTGCAAAAACATGAAGTGGCCATTTGGAGGACTTCCCAATGGAATCATCCCTTTCTGGAAAG----CCATACAGTCAGAGATCCTGGAGGCAAG-GCCAGTGTCAGGAGGCTTCTAGTCAACATTTAGAAGATTCATTAGCCATGTGGTCCCTCCTGACATCAACTAGATCCTTGGAGAGAGCCTGTAGCATTTATTTCCAAAGACCCAGCTACAGATTCCTAGTAGTTTCCAGAGACCCAGCT i canFam3.chr1 n 14827 C 0 e chlSab2.chr6 47349711 36504 + 50890351 T e papAnu2.chr19 47662693 29919 + 51301725 T e macFas5.chr19 55591591 42299 + 59248254 T e rheMac3.chr19 60492324 50333 + 64156825 T a score=229038.000000 s hg38.chr19_GL949753v2_alt 378990 78 + 796479 CCAGTCACCTGGTTGTTTCCAGTGATCCAGCTGCTGTCACTTCTCTGTTTCAAGACACCCAGCTCCAGTCTCCTGGCT s panTro4.chr19 59572088 78 + 63644993 CCAGTCACCTGGTTGTTTCCAGTGATCCAGCTGCTGTCACTTCTCTGTTTCAAGACACCCAGCTCCAGTCTCCTGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488320 78 + 60714840 CCAGTCACCTGGTTGTTTCCAGTGACCCAGCTGCTGTCACTTATCTGTTTCAAGACACCCAGCTCCAGTCTCCTGGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103182604 78 - 106955855 CCAGTCACCTGGTTGTTTCCAGTGACCCAGCTGCTGTCACTTATCTGTTTCAAGACACCCAGCGCCAGTCTCCCGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60441991 78 + 64156825 ccAGTCACCCGGTTGTTTCCAGTGACCCAGCTGCTGTCACTTGTCTGTTTCAAGACACCCAGCTCCAGTCTCCTGGCT i rheMac3.chr19 T 50333 C 0 s macFas5.chr19 55549292 78 + 59248254 ccAGTCACCCGGTTGTTTCCAGTGACCCAGCTGCTGTCACTTGTCTGTTTCAAGACACCCAGCTCCAGTCTCCTGGCT i macFas5.chr19 T 42299 C 0 s papAnu2.chr19 47632774 77 + 51301725 ccagtCACCCGGTTGTTTCCAGTGACCCAGCTGCTGTCACTTGTCTGTTTCAAGACACCCAGCTCCAGTGTCCTGGC- i papAnu2.chr19 T 29919 C 0 s chlSab2.chr6 47313207 77 + 50890351 ccAGTCACCCGGCTGTTTCCAGTGACCCAGCTGCTGTCACTTGTCTGTTTCAAGACACCCAGCTCCAGTGTCCTGGC- i chlSab2.chr6 T 36504 C 0 s calJac3.chr22 3556750 78 - 49145316 TTACTCACCTGACTGTTTCCAGAGACCCAGCTACAGTTACCTGGCTGTTTCTAGAGACCCAGCTAAAGTCACCTGCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921620 38 + 122678785 ATAGTCACTTGGCTGTTTCCAGAGACCCAGCTATGGTC---------------------------------------- i canFam3.chr1 C 0 C 0 a score=1500.000000 s hg38.chr19_GL949753v2_alt 379068 1 + 796479 G s panTro4.chr19 59572166 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488398 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103182682 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442069 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55549370 1 + 59248254 G i macFas5.chr19 C 0 C 0 e canFam3.chr1 102921658 0 + 122678785 C e calJac3.chr22 3556828 0 - 49145316 C e chlSab2.chr6 47313284 0 + 50890351 C e papAnu2.chr19 47632851 0 + 51301725 C a score=1049430.000000 s hg38.chr19_GL949753v2_alt 379069 396 + 796479 TTTGCTGAGTCTCAGCTATAGCCATC-------------------------------CCAGCTGATTCCATTAACAATGTTGCA-T-CCCCCTGCAGTTTCCAAATGTCTTCTGTAAATCCCCCCAGCTGCCCCAG------------CAATCGTCTACTCAGCTGATCCTGAACATTCTCCTAGAGTTTAGTT-GTTGACCTTGAGAATGAGCTATACATATGGATCTGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTTCATGCACCAATGAA-TAGTTTAAAGACCTCACATCTG--GCAGTCCTGTGTCATGTTCTGGGGTGTATAGATCACTTGGACCCAATCTCTGCCTTCAT-GTTGTTCAAGGTTACATGGGGTTAACAAGAGCTACAAAGGAGGTGTCAG----------TATTTTTT-TAAGGAtttcattggcagtgattg s panTro4.chr19 59572167 396 + 63644993 TTTGCTGAGTCTCAGCTATAGCCATC-------------------------------CCAGCTGATTCCATTAACAATGTTGCA-T-CCCCCTGCAGTTTCCAAATGTCTTCTGTAAATCCCCCCAGCTGCCCCAG------------CAATGGTCTACTCAGCTGATCCTGAACATTCTCCTAGAGTTTAGTT-GTTGACCTTGAGAATGAGCTATACATATGGATATGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTTCACGCACCAATTAA-TAGTCTAAAGACCTCACATCTG--GCAGTCCTGTGTCATGTTCTGGGGTGTACAGATCACTTGGACCCAATCTCTGCCTTCAT-GTTGTTCAAGGTTACATGGGGTTAACAAGAGCTACAGAGGAGGTGTCAG----------TATTTTTT-TAAGGAtttcattggcagtgattg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488399 395 + 60714840 TTTCTTGAGTCTCAGCTATAGCCATC-------------------------------CCAGCCAATTCCATTAACAACATTGCA-T-CCCCCTGCAGTTTCCAAATGTCTTCTGTAAATCCCCCCAGCTGCCCCAG------------CAATCATCTACTCAGCTGATCCTGAACATCCTCCTAGAGTTTAGTT-GTTGATCTTGAGAATGAGCTATACATATGGATCTGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTtcatgcaccaattaa-tagtttaaatacctcacatctg--gcagtcctgtgtcatgttctggggtgtacagatcacttggacccagtctctgccttcat-gttgttcaAGGCTACATGGGGTTAA-AAGAGCTACAAAGGAGGTGTCAG----------TATTTTTT-TAAGGAtttcattggcagtgattg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103182683 391 - 106955855 TTTGTTGAGTCTCAGCTATAGCCATC-------------------------------CCAGCCGATTCCATTAACAATGTTGCA---CCCTCTGCAGTTTCCAAATGTCTTCTGTAAACGCCCCCAGCTGCCCCAG------------CAATCGTCTACTCAGCGGATCCTGAACATCCACCTAGAGTTTAGTT-GTGGATCTTGAGAATGAGCTATACATACGGATCTGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTTCATGCACCAATTAA-TAATTGAAAGACCCCACATCTG--GCAGTCCTGTGTCATGTTCTGGGGCGTACAGATCACTTGGACCCAGTCTCTGCCTTCAT-GTTGTTCAAGGTTACACGGGGTTAACAAGAGCTACAAAGGAGGT----G----------TATTTTTT-TAAGGAtttcattggcagtgattg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442070 397 + 64156825 TTTGTTGAGTCTCAGCCGTAGTCATC-------------------------------CCAGCTGATTCCATCAACAACGTCGCA-T-CCTCCTGCAGTTTCCAAATGTCTTTTGTAAATCCCCCGAGCTGCCCCGG------------CAATCATCTACTCAGCTGATCCTGAACGTCCTCCTAGTGTTTAGCT-GTTGATCTTGAGAATGAGCCGTACATACGGATCTGAGAGCTGAGAC-CAGTCCACTGGGTCATGCTTTACTTCCTGCACcaataaa-tactttaaagacctcacatctg--gcagtcctgtgtcatgctctggggtgtacagatcacttggacccagtctctgccttcat-gttgttcaAGGCTGCATGGGATTAACAAGAACTACAAAGGAGGTGTCAG----------TATTTTTTGTAAGTAtttcattggcagtgattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55549371 397 + 59248254 TTTGTTGAGTCTCAGCCGTAGTCATC-------------------------------CCAGCTGATTCCATCAACAACGTCGCA-T-CCTCCTGCAGTTTCCAAATGTCTTTTGTAAATCCCCCGAGCTGCCCCGG------------CAATCATCTACTCAGCTGATCCTGAACGTCCTCCTAGTGTTTAGCT-GTTGATCTTGAGAATGAGCCGTACATACGGATCTGAGAGCTGAGAC-CAGTCCACTGGGTCATGCTTTACTTCCTGCACCAATACA-TACTTTAAAGACCTCACATCTG--GCAGTCCTGTGTCATGCTCTGGGGTGTACAGATCACTTGGACCCAGTCTCTGCCTTCAT-GTTGTTCAAGGCTGCATGGGATTAACAAGAACTACAAAGGAGGTGTCAG----------TATTTTTTGTAAGTAtttcattggcagtgattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47632851 395 + 51301725 --TGTTGAGTCTCAGCTGTAGTCATC-------------------------------CCAGCTGATTCCATCAACAACGTCGCA-T-CCTCCTGCAGTTTCCAAATGTCTTCTGTAAATCCCGCGAGCTGCCCCGG------------CAATCATCTACTCAGCTGATCCTGAACGTCCTCCTAGAGTTTAGCT-GTTGATCTTGAGAACGAGCCGTACATATGGATCTGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTTCCTGCACCAATAAA-TACTTTAAAGACCTCACCTCTG--GCAGTCCTGTGTCATGCTCTGGGGTGTACAGATCACTCGGacccagtctctgccttcat-gtCGTTCAAGGCTGCATGGGATTAACAAGAACTACAAAGGAGGTGTTAG----------TATTTTTTGTGAGTATTTCATTGGCAGTGATTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47313284 395 + 50890351 --TGTTGAGTCTCAGCTGTAGTCATC-------------------------------CCAGCTGATTCCATCAACAACGTCGCA-T-CCCCCTGCAGTTTCCAAATGTCGTCTGTAAATCCCCCGAGCTGCCCCGG------------CAATCATCTGCTCAGCTGATCCTGAACGTCGTCCTAGAGTTTAGCT-GTTGATCTTGAGAATGAGCCGTACATATGGATCTGAGAGCTGAGAC-CAGTCCTCTGGGTCATGCTTTACTTCCTGCACCAATAAA-TACTTTAAAGACCTCACATCTG--GCAGTCGTGTGTCATGCTCTGGGGTGTACACATCACTCGGACCCAGTCTCTGCCTTCAT-GTCGTTCAAGGCTACATGGGATTAACAAGAACTACAAAGGAGGTGTCAG----------TATTTTTCTTAAGTATTTCATTGGCAGTGattg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556828 446 - 49145316 TTTCTAGAGGCCCAGCTACAGCCATCAGGCTATTTCCAGAGACCCAGCTACCTCCAGTCAGCTGATTTCCTGAGTAGTGATGCA-GACCCCAAACTGGTCCCAGGTGTCTCCGGTGAA--CCTCCAGTGACCCCAG-AGACTTTG-CTTAATTATCTTCCCTGCTGACCCCAAAAACCTTCCCAGAAGTCAAGT-GATAACCTTGAGACTGCGCTATACACACACAGCTGGCAGCTATGCC-CGATTCTCTGCATCACGCTCT-CCTCTGGCAtcaataaattattttgaagacctcacatctg--gcagccccgt-tcctggtcctgggtgcacaggtctcctggacccagcctctgccttcacagttgttcagagctgagtaaaggaaacagaACCTACAAAGGAGGTGTCAGAAAAAAAGCATTTTcttt-tttaaatttaattgatcaagatgg i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921658 346 + 122678785 -------------------------------------------------------------------------------TTGCAGT-CCCACAGATGATTCCAGTTGTGTCCTGTGTATCCCC--AACTGCCCCTAGAGGCTCCGTTTTAATTTTCCACTCAGCTGGCTCTAAAGACTTTCC-AGAGTTTGGTTAGTTGATCTTGAACTGGGACTATACTTGCGCAGCTAATATCTGAGACACTGTTTCCTGCACTATGCTTCTCTTTGTTCATCAATAAA-AGTTTTCACAGGCCCAC-TCTGCAGCAGTCCTGTGCAAGGAACCAGAGTACACAGGTAACTCGGTCCCAGTCTCTGC------------TCAGAGTTTTGAGCAGAAAACAAG----ACAAAGAATGCATCAG----------TGTTTTCT-GGACGAGTGTCCTAGGGATGAATG i canFam3.chr1 C 0 T 467 a score=195023.000000 s hg38.chr19_GL949753v2_alt 379465 67 + 796479 catatattcaagatgcacaaggtgataatttgatatacatatacattgtgaaataatagccacggtc s panTro4.chr19 59572563 67 + 63644993 catctattcaagatgcacaaggtgataatttgatatacatatacattgtgaagtaatagccacgatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488794 67 + 60714840 catatattcaagatgcacaaggtgataatttgatatacatatacattgtgaaataatagccacgatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103183074 67 - 106955855 catatattcaagatgcacaaggtgataatttgatatacatatacattgtgaaataatagccatgatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442467 67 + 64156825 catatattcgagatgcacaaggtgataatctgatatacatatacattgtgaaataatagccacggtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55549768 67 + 59248254 catatattcgagacgcacaaggtgataatctgatatacatatacattgtgaaataatagccacggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633246 67 + 51301725 CATATATTCGAGATGCACAAGGTGATAATCTGATATACATCTACATTGTGAAATAATAGCCACGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47313679 67 + 50890351 catatattcgagatgcacaaggtgataatctgatatacatatgcattgtgaaataatagccacggtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3557274 67 - 49145316 tacatattcaaggcgtaaaatgtgataatttgttatacgcatacattgtgcaatgataaccacaatc i calJac3.chr22 C 0 I 593 e canFam3.chr1 102922004 467 + 122678785 T a score=161946.000000 s hg38.chr19_GL949753v2_alt 379532 74 + 796479 aaatgaatcagcgcatccatcaccAGCTACGCTGTACATAAGATCCCCTGAACTTGCTCATCTTAGGCCTCCAA s panTro4.chr19 59572630 74 + 63644993 aaatgaatcagcgcatccatcaccAGCTACGCTGTACATAAGATCCCCTGAACTTGCTCATCTTAGGCCTCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488861 74 + 60714840 aaatgaatcagcacatccgtcaccACCCACGCTGTACATAAGATCCCCTGAATGTGCTCATCTTAGGCCTCCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103183141 74 - 106955855 aaatgaatcagcacatccatcaccACCCACGCTGTACATAAGATCCCCTGAGCTTGCTCATCTTAGGCCTCCGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442534 74 + 64156825 aaattaatcagcacatccatccccgcccatgctGTACATAAGATCCCCTGAACTTGCTCCTCTTAGGCCTCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55549835 74 + 59248254 aaattaatcagcacatccatccccacccatGCTGTACATAAGATCCCCTGAACTTGCTCCTCTTAGGCCTCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633313 74 + 51301725 AAATTAATCAGCACATCCATCCCCACCCATGCTGTACATAAGATCCCCTGAACTTGCTCATCTTAGGCCTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47313746 67 + 50890351 acattaatcagcacatccatccccACCC-------ACACAAGATCCCCTGAACTTGCTCATCTTAGGCCTCCAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3557341 593 - 49145316 I a score=330303.000000 s hg38.chr19_GL949753v2_alt 379606 162 + 796479 GATGGAGCAT--ATG-ATCAGGGATCAATTAAGGTGTCTGAGCGGATGCATGGATGGGTGAAGACAGAGAGCTAATCCCACTTATGCACTTACACACATAT--GCACATGTACTCACACATTCACACATGCACACACATGCACAAACCTGAACGCACTCACACATGT s panTro4.chr19 59572704 162 + 63644993 GATGGAGCAT--ATG-ATCAGGGATCAATTAAGCTGTCTGAGGGGATGCATGGATGGGTGAAGACAGAGAGCTAATCCCACTTATGCACTAacacacatat--gctcatgtactcacacattcacacatgcacacacatgcacaaacatgaacgcactcacacaTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56488935 152 + 60714840 GATGGAGCATTAAGT-ATCAGGGATGAATTAAGGTGTCTGAGGGGAGGCATGGATGGGTGAAGTTAGAGAGCTCATCCcacttatgcacttacacacatat--gcacatgtactcacacattcacacatgcacacaca----------tgaacgcactcacac--GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103183215 162 - 106955855 GATGGAGCAT--ATA-ATCAGGGATGAATTAAGGTGTCTTAGGGGAGGCATGGATGGGTGAAGACAGAGAGCTAATCCCACTTATGCACTTACACACATAT--GCACATGTACCCACACATTCACACGTGCACACACATGCACAAACATGAACGCACTCACACATGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442608 144 + 64156825 GATGGAGCAT--ATGTATCCAGGATGAACTGAGGTGTCTGAGGGGAGGCATGGATGGGTGAAGACAGACAGCTCATCCCACTTACGCACATA-ACACACATGCGCACATGTACTCACACATTCAC--------------------GCATGAACACATTCTCACATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55549909 162 + 59248254 GATGGAGCAT--ATGTATCCAGGATGAACTGAGGTGTCTGAGGGGAGGCATGGATGGGTGAAGACAGACAGCTCATCCCACTTACGCACATA-ACAcacat--gcacatgtactcacacattcacgcatgcacacgcaTGCGCAAGCATGAACACATTCTCACATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633387 162 + 51301725 GATGGAGCGT--ATGTATCCGGGATGAACTGAGGTGTCTGAGGGGAGGCATGGGTGAGTGAAGACAGACAGCTCATCCCACTTacgcacata-acacacat--gcgcatgtactcacacattcacgcacgcacacgcatgcgcaagcatgAACACATTCTCACATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47313813 162 + 50890351 GATGGAGCGT--ATGTATCCGGGATGAATTAAGGTGTCTGAGGGGAGGCATGGATGGGTGAAGACAGACAGCTCATCCCACTTATGcacata-acacacat--gcacatatactcacacattcacgcacgcacacGCGTGCGCAAGCATGAACGCACTCACACATGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3557934 118 - 49145316 GACAAAGCAC--GTGTATCAGGAATGAATGAA-----------GGAGGTTCAGCTGGGTGAAGGCAGAGAGCTGACCCTGC-----------------CAG-------------------TTCACACCTGCACATACATGCACAGGAATGCATGCTCTCACACACAT i calJac3.chr22 I 593 T 1350 e canFam3.chr1 102922004 467 + 122678785 T a score=468336.000000 s hg38.chr19_GL949753v2_alt 379768 197 + 796479 CAGGAGACCTCTGAATCCTCTGTGCGCTGGGAC---TTGGTTGTCTCCACCCCTCTTAGAAAGTTAGATGCTCTCCCTATTCAGATTAAAACGGAAAATTACTTGAGAACCACTAGGGGGAGACAGTACCTCATTTGAATTAATTTTTGTGCACATTTAAAATAAACAATAACACACTTACCATGGGCATGCCtttggcc s panTro4.chr19 59572866 197 + 63644993 CAGGAGACCTCTGAGTCTTCTGTGCGCTGGGAC---TTGGTTGTCTCCACCCCTCTTAGAAAGTTAGATGCTCTCCCTATTCAGATTAAAACGGAAAATTACTTGAGAACCACTAGGGGGAGACAGTGTCTCATTTGAATTAATTTTTGTGCACATTTAAAATAAACAATAACACACTTACCATGGGCATGCCtttggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56489087 197 + 60714840 CTGGAGACCTCTGAGTCATCTGTGCGCTGAGAC---TTGGTTGTCTCCACCCCTCTTAGAAAGTTAGATGCTCTCCCTATTCAGATTAAAACGGAAAATTACTTGAGAACCACTAGGGGGAGAGAGTGTCTCATTTGAATTAATTTTTGTGCACATTTAAAATAAACAATAACACACTTACCATGGGCATGCCTTTGGCC i ponAbe2.chr19 C 0 I 122 s nomLeu3.chr10 103183377 197 - 106955855 CAGGAGACCTCTGAGTCCTCTGTGCACTGGGAC---TTGGTTGTCTCCACCCGTCTTAGAAAGTTAGATGCTCTCCCTATTCAGATTAAAACGGAAAATTACTTGAGAACCACTAGGGGGAGACAGTGTCTTATTTGAATTAATTTCTGTGCACATTTAAAATAAACAATAACACACTTACCATGGGCATGCCtttggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442752 200 + 64156825 CAGGAGACCTCTGAGTCCTCTGTGCGCTGGGACTTGTTGGTTTTCTCCACTCCTCTTACGAAGTTAGATGCTCTCCCTACTCAGATTAAAATGGAAAATGACTTGAGAACCACTAGGGGGAGACAGTGTCTCATCTGACTTAATTTTTGTGCACATTTTAAATAAAAAATAGCACACTTACCATGGGCATGCCTTTGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55550071 200 + 59248254 CAGGAGACCTCTGAGTCCTCTGTGCGCTGGGACTTGTTGGTTTTCTCCACTCCTCTTACAAAGTTAGATGCTCTCCCTACTCAGATTAAAATGGAAAATGACTTGAGAACCACTAGGGGGAGACAGTGTCTCATCTGACTTAATTTTTGTGCACATTTTAAATAAAAAATAGCACACTTACCATGGGCATGCCTTTGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633549 200 + 51301725 CAGGAGACCTCTGAGTCCTCTGTGCACTGGGACTTGTTGGTTTTCTCCACTCCTCTTATAAAGTTAGATGCTCTCCCTACTcagattaaaatggaaaatgactTGAGAACCACTAGGGGGAGACAGTGTCTCATCTGACTTAATTTTtgtgcacattttaaataaaaaatagcacaCTTACCATGGGCATGTCTTTGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47313975 200 + 50890351 CAGGAGACCTCTGAGTCCTCTGTGTGCTGGGACTTGTTGGTTTTCTCCACTCCTCTTATACAGTTAGATGCTCTCCCTACTCAGATTAAAATGGAAAATGACTTGAGAACCACTAGGGGGAGACAGTGTCTCATCTGACTTAATTTTTGTGCACATTTTAAATAAAAAATAGCACACTTACCATGGGCATGCCTTTGGCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3558052 1350 - 49145316 T a score=154161.000000 s hg38.chr19_GL949753v2_alt 379965 72 + 796479 ggattgcaaaggtaaacatatatcaaagcatctcatggtacccaataaa----------tatatacaattattatttttcaa s panTro4.chr19 59573063 72 + 63644993 ggattgcaaaggtaaacatatatcaaagcatctcatggtacccaataaa----------tatatacaattattatttttcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56489406 72 + 60714840 GGATTGCAAAGgtaaacatatatcaaagcatctcatggtacccaataaa----------tatatacaattataatttttcaa i ponAbe2.chr19 I 122 C 0 s nomLeu3.chr10 103183574 72 - 106955855 agattgcaaaggtaaacatatatcaaagcaactcatggtacccaataaa----------tatatacaattattatttttcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60442952 81 + 64156825 GAATTGCAACGgtaaacatatatcaaagcatctcatgatacccggtaaatacgtatgattatatacaattatt-tttttcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55550271 81 + 59248254 GAATTGCAACGgtaaacatatatcaaagcatctcatgatacccggtaaatacgtatgattatatacaattatt-tttttcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633749 81 + 51301725 GGATTGCAAAGGTCAACATTTATCAAAGCATCTCATGATACCCAGTAAATACATATgattatatacaattatt-tttttcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47314175 72 + 50890351 GGATTGCAATGgtaaacatatatcaaagcatctcatgatacccaataaa----------tgtatacaattattatttttcaa i chlSab2.chr6 C 0 I 131 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3558052 1350 - 49145316 T a score=1527813.000000 s hg38.chr19_GL949753v2_alt 380037 653 + 796479 ttaaaaTATCGTAATAAAATAACAGAAAAGAAACCTGCATACT--TGTAACAGAGTGGATTTTTAAATGTCGTTTTATACAAG-AAAAAGAATATT---TTTTAAAAAACTCAACAATAACTCAATCAGCTTATCCTATGGAGCAATTACTAGTTGAATACTATGCAAACATCAACACATTCACTAGTCTTACATATGCCCCACAGCTTGTCCTA-TTTTTTCCCCACTtgtggggattttgatagttgttgagtatgtctaatccaattatacattccagagcaaggaataaagccacaggatgcatttggtggccaagaaaattcaacaggagacaaatctgagctaaaggttcattgactacctgacctccataagcttctaatctgactggagggtcaccatgatgttttgggtcttctgaagttagtgttagct-cagagccagtgtctagttgcacccaaaatatctgatcatttcctttacccagtacacagctaccatgataaaggccataggtccatttaagggaagctgagataaatataattgtttaactttttatagtatataccggggcagcgccttcaaggatacctggtcttccctttaattcaaggggttctgggtctataaactggtgaaattctagtaa-ttga s panTro4.chr19 59573135 655 + 63644993 ttaaaaTACCGTAATAAAATAACAGAAAAGAAACCTGCATACT--TGTAACAGAGTGGATTTTTAAATGTCGTTTTATACAAG-AAAAAGAATATT---TTTAAAAAAACTCAACAATAACTCAATCAGCTCATCCTATGGAGCAATTACTAGCTGAATACTACGCAAACATCAACACATTCAGTAGTCTTACCTATGCCCCACAGCTTGTCCTATTTTTTTCCCCACTtgtggggattttgatagttgttgagtatgtctaatccaattatacattccagagctaggaataaagccacaggatgcatttggtggccaagaaaattcaataggagacaaatctgagctaaagcttcattgactacctgacctccctaagcttctaatctgactggagggtcaccatgatgttttgggtcttctgaagttggtgttagct-cagagccagtgtctagttgcacccaaaatatctgatcatttcctttacccagcgcacagctaccatgataaaggccataggtccatttaagggaagctgagagaaatataattgtttaactttttgtagtatataccggggcagcgccttcaaggatacctggtcttccctttaattcaaggggttctgggtctataaactggtgaaattctagtaatttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56489478 648 + 60714840 ttaaaaTACCATAATAAAATAACAGAAAAGAAACCTGCATACA--TGTAACAGGGTGGATTTTTAAATGTCATTTTATACAAG-AAAAAGAATATT---TTTAAAAAAACTCAACAATAAC----TCAGCTCATCCTATGGAGCAATTACTAGTTGAATACTATGCAAACATCAACACATTCACTAGTCTTACATGTGCCCCACAGCTCGTCCTA-TTTTTTCCCCACTtgtggggattttgatagttgttgagtatgtctaatccaattatacattccagagctaggaataaagccacaggatgcccttggtggccaagaaaattcagtaggagacaaatctgagctaaagcttcattgactacctgacctccataagcttaaaatctgactggagggtcaccatgatgttttgggtcttctgaatttagtgttagct-cagagccagtgtttagttgtacccaaaatatctgattatttcctttacccagtgcacagttgccatgataaaggccataggtccatttaagggaagctgagagaaatataattgtataactttttatagtatatactggggcagcgccttcaaggatacctggtcttccctttaattcaaggggttctgggtctat-aactggtgaaattctagtaa-ttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103183646 652 - 106955855 ttaaaaTACCATAATAAAATAACAGAAAAGAAACCTGCATATT--TGTAACAGGGTGGATTTTTAAATGTCATTTTATACAAG-AAAAAGAATATT---TTTTTAAAAACTCAACAATAACTCAATCAGCTCACCCTGTGGAGCAATTACTAGCTGAATACCACGCAAACATCAACACATTCACTAGTCTTACATATGCCCCACAGCTTGTCCTATTTTTTTCCCCACTtgcggggattttgatagctgttgagtatgtctaatccaattatacattccagaactacgaataaagccacaggatgcctttggtggctaagaaaattcaataggagacaaatttgagctaaagcttcattgattacctgacctccataagcttcaaatctgactggagggtcaccatgatgttttgggtcttctgaagttagtgttagct-cagagccagcgtctagttgtacccaaaata--tgattatttcctttacccagtgcacagttaccacgataaacgccataggtccatttaagggaagctgagagaaatataattgtataactttttatagtatataccggggcagcgccttcaaggatacctggtcttccctttaattcaaggggttctgggtctataaactggtgaaattggagtaa-ttga i nomLeu3.chr10 C 0 I 16 s rheMac3.chr19 60443033 658 + 64156825 ttaaaaTACCATAATAAAATAACGGAAAAGAAACCTGCATACTGGGGTAACAGGGTGGATTTTTAAATGTTGTTTTATACAAG-AAAAAGAATATT-AAAAAAAAAAAACTCAACAATAACTCAATCAGCTCATTCTATGCAGCAATTACTAGTTGAATACTATGCAAACGTCAACACATTCAGTAGTCTTACATATGCCCCATAGCTTGTCCTATCTTTTTCCCCACTtgtggggattttgatagctgttgaggatgtctaatccaattatacattccagagctaggaataaagccacaggatgcctttggtggccaagaaaattcaataggagacaaatctgagctaaagcttcattgactacctgacctctataagcttctaatctgactggagggtcaccatgatgttctgggtcttctgaagttagtgttagct-cagagccagtgtctagctgtacccaaaatatctgattatttcctttacccagtgcacagttaccatgataaaggccataggtccatttaaggaaagttgagagaaatataattgtataactttttgtagtatctactggagcagtgctttcaagggtacctggtcttccctttaattcaaggggttctgggtctataaactggccaaattccagtaa-ttga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55550352 658 + 59248254 ttaaaaTACCATAATAAAATAACGGAAAAGAAACCTGCATACTGGGGTAACAGGGTGGATTTTTAAATGTTGTTTTATACAAG-AAAAAGAATATT-AAAAAAAAAAAACTCAACAATAACTCAATCAGCTCATTCTGTGCAGCAATTACTAGTTGAATACTATGCAAACATCAACACATTCAGTAGTCTTACATATGCCCCATAGCTTGTCCTATCTTTTTCCCCACTtgtggggattttgatagctgttgaggatgtctaatccaattatacattccagagctaggaataaagccacaggatgcctttggtggccaagaaaattcaataggagacaaatctgagctaaagcttcattgactacctgacctctataagcttctaatctgactggagggtcaccatgatgttctgggtcttctgaagttagtgttagct-cagagccagtgtctagctgtacccaaaatatctgattatttcctttacccagtgcacagttaccatgataaaggccataggtccatttaagggaagttgagagaaatataattgtataactttttgtagtatatactggagcagtgctttcaagggtacctggtcttccctttaattcaaggggttctgggtctataaactggccaaattccagtaa-ttga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47633830 655 + 51301725 ttaaaataccataataaaataacagaaaagaaaccTGCATACT--GGTAACGGGATGGATTTTTAAACGTCGttttatacaagaaaaaagaatatt---aaaaaaaaaactcaacaataacTCAATCAGCTCATCCTATGCAGCAATTACTAGTTGAATACTACGCAAACATCAACACATTCAGTAGTCTTACATATGCCCCATAGCTTGTCCTATCTTTTTCCCCACTTGTGGGGATTTCGATAGTTGTTGAGGATGTCTAATCCAAATATACATTCCAGAGCTAGGAATAAAGCCACAGGATGCCTTTCGTGGCCAAGAAAATTCAACAGGAGACAGATCTGAGCTAAAGCTTCATTGACTACCTGACCTCTATAAGCTTCTAATCTGACTGGAGGGTCACCATGGTGTTCTGGGTCCTCTGAAGTTAGTGttagct-cagagccagtgtctagCTGTACCCAAAatatctgattatttcctttaccCAGTGCACAGTTACCATGATAAAGGCCATAGGTACATTTAAGGAAAGTTGAGAGAAATATAATTGTATAACTTTTTGTAGTATATACTAGAGCAGTGCTTTCAAGGGTACCTGGTCTTCCCTTTAATTCAAGGAGTTCTGGGTCTATAAACTGGCCAAATTCCAGTAA-TTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47314378 657 + 50890351 TTAAAGTACCATAATGAAATAACAGAAAAGAAATCTGCATACT--GGTAACAGGGTGGATTTTTAAATGTCGTTTTATACAAG-AAAAAGAATATTAAAAAAAAAAAAACTCAACAATAACTCAATCAGCTCATCCTATGCAGCAATTACTAGTTGAATACTACGCAAACATCCACACATTCAGTAGTCTTACATATGCCCCATAGCTTGTCCTATCTTTTTCCCCACTtgtggggatttcgatagttgttgaggatgtctaatccaattatacattccagagctaggaataaagccaca-gatgcctttggtggccaagaaaattcaacaggagacagatctgagctaaagcttcattgactacctgacctctataagcttctaatctggctggagggtcaccacgatgttctgggtcttctgaagttagtgttagctccagagccagtgtctagctgtacccaaaatacctgattatttcctttacccagtgcacagttaccatgataaaggccataggtccacttaaggaaagctgagagaaatataactgtataactttttgtagtatatactggggcagtgccttcaagggtacctggttttcccgttaattcaaggggttctgggtctataaactggccaaattccagtaa-ttga i chlSab2.chr6 I 131 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3558052 1350 - 49145316 T a score=245817.000000 s hg38.chr19_GL949753v2_alt 380690 142 + 796479 ttaagagactgtaactgtctattttatgattttaattagattcttgttctctttgccaagaaatgttctgcttatacaaatcaagtaagaatgaagtaagtttcctatctatttcacgtcttagaacgctgcggtcaactag s panTro4.chr19 59573790 142 + 63644993 ttaagagactgtaactgtctattttatgattttaattagattcttgttctctttgccaagaaatgttctgcttatacaaatcaagtaaggatgaagtaagtttcctatctatttcacgtcttagaacgctgcggtcaactag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490126 142 + 60714840 ttaagagactgtaactctctatgttatgattctaattagattcttgttctctttgccaagaaatgttctgcttatacaaatccagtaagaatgaagtaagtttcctatctatttcatgtcttagaacgctgcagtcaactgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60443691 140 + 64156825 ttaagaaactgtgactctctattttatgattctaattagattctta--ctcttcgccaagaaacgttctgcttatacaaatcaagtaagaattaagtaagtttcctatctatgtcacgtcttagaacgctgcggtcaactgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551010 140 + 59248254 ttaagaaactgtgactctctattttatgattctaattagattctta--ctcttcgccaagaaacgttctgctgatacaaatcaagtaagaattaagtaagtttcctatctatgtcacgtcttagaacgctgcggtcaactgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47634485 140 + 51301725 TTAAGAAACTGTGACTCTCTATTTTATGATTCTAATTAGATTCTTA--CTCTTCGCCAAGAAATGTTCTGCTGATACAAATCAAGTAAGAATTAAGTAAGTTTCCTATCTATGTCACGTCTTAGAACGCAGCGGTCAACTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315035 140 + 50890351 ttaagaaactgtgactctctattttatgattctaattagattctta--ctcttcgccaagaaatgttctgcttatacaaatcaagtaagaattaagtaagtttcctatctatgtcacgtcttagaacgctgcagtcaactgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3558052 1350 - 49145316 T e nomLeu3.chr10 103184298 16 - 106955855 I a score=1129718.000000 s hg38.chr19_GL949753v2_alt 380832 505 + 796479 acaacactaaagggctgcatgagacagtctattctgattactgccttgattctgctttccattatgatcaccacacccaGTTCTATGATAACCACACCCAATTCAACACACCAGATTctcacctttgtcgactgacttctgacacttgagtcctgccactctaggatccaactactccccttacatttaggtttctcggttcagtggcagcagttcccactggaagttctggcctctcctaatacaccctctgtcctttcccaccttgtctctgccctggaggctgactctatggattgcatcaccaacatcttcttgtgtctagtgtctggttgagttcagccatgggaggcactgtcaggagagcagagggtgagaggagagagaggccggggaatctattcccacacgtacgccctgccaggcaataaactgtgctcctctacccatgacataagctcccacgaggcacctcccatctcccagctcagtcc------------tcAAGGTGACT s panTro4.chr19 59573932 483 + 63644993 acaacactaaagggctgcatgagacagtctattctgattactgccctgattctgctgtccattatgatc---------------------accacacccaattcaacacgccagattctcacctttgtcgactgacttctgacacttgagtcctgccactctgggatccaagtactccccttacatttaggtttctcggttcagtggcagcagttcccactggaagttctggcctctcctaatacaccctctgtcctttcccaccttgtctgtgccctggaggctgactctatggattgcatcaccaacatcttcttgtgtctagtgtatggttgagttcagccatgggaggcactgtcaggagagcagagggtgagaggagagagaggccggggaatctattcccacatgt-cgccctgccaggcaataaactgtgctcctctacccatgacataagctcccacgaggcgcctcccatctcccagctcagtcc------------tcAAGGTGACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490268 503 + 60714840 acaacactaaagggctgcatgagacagtctattctgattactgccttgattctgatgtccattatgatcaccacacccagttctatgataaccacacccaattcaacacaccagattctcacctttatcgactgacttctgacacttgagtcctgccactctaggatccaactacacctcttacatttaggtttctcagttcagcggcagcagttccctctggaagttctggccactcctaatacaccctctgtcctttcccaccttgtgtgtgccctggaggctgactctatggattgcatcaccaacatcttcttgtgtctagtgtctggttgagttcagccatgggaggcactgtcaggagagcagagggtgagag--gagagaggctggggaatctattcccacacgtacgcactgtcaggcaaaaaactgtgctcctctacccatgacataagctcccacgaggcacctcccatctcccaactcagtcc------------tcAAGGTGACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184314 494 - 106955855 Acaacactaaagggttgcatgagacagtctattctgattactgctttgattctgctgtccattatgatc---------------------accacacccaattcaacacaccagattctcacctttgtcgactgacttctgacacttgagtcctgccactctgggatccaactactccccttacatttaggtttctcagttcggtggcagcagttcccactggaagttctggccactcctaatacaccctctgtcctttcccaccttgtctgtgccctggaggctgactccatggattgcatcaccaacatcttcttgcgactagtgtctggttgagttcagccaagggtggcgctgtcaggagagcagagggtgagaggagagagaggc-ggggaatctatt-ccacacgtacgccctgccaggcaaaaaactgtgctcttctacccgtgacataagctcccacgaggcacctcccatctcccagctcagtcctcaaggtgactttcaaggtgact i nomLeu3.chr10 I 16 C 0 s rheMac3.chr19 60443831 503 + 64156825 acaacactaaagggctgcatgagacagtctattcggattactgttttgactctgctgtccattatgatcaccacacccaGTTCTGTGATAACCACACCCAATTCAACACACCAGATTctcgcctttgtccactgacttctgacac-tgagtcctgccactctgggatccaactaccccccttacatttacg-ttctccgttcagtggcagcagttcccactggaagttctggccactcctaatacaccctctgtcctttcccatcttgtctgtaccctggaggctgactgtatggattgcatcaccaacatcttcttgcgtctagtttctggttgagttcagccatgggaggcaccgccaacagagcagacagtgagaggagagagaggctggggaatctattcccacacatacaccctgccaggcaaaagactgtgctcctctacccatgacatcagcttccacgaagcacttctcatctcccagctCCGTCC------------TCAGGGTGACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551150 503 + 59248254 acaacactaaagggctgcatgagacagtctattcggattactgttttgactctgctgtccattatgatcaccacacccagttctgtgataaccacacccaattcaacacaccagattctcgcctttgtccactgacttctgacac-tgagtcctgccactctgggatccaactacaccccttacatttagg-ttctccgttcagtggcagcagttcccactggaagttctggccactcctaatacaccctctgtcctttcccatcttgtctgtaccctggaggctgactctatggattgcatcaccaacatcttcttgcgtctagtttctggttgagttcagccatgggaggcaccgtcaacagagcagacagtgagaggagagagaggctggggaatctattcccacacatacaccctgccaggcaaaagactgtgctcctctacccatgacatcagcttcCACGAAGCACTTCTCATCTCCCAGCTCCGTCC------------TCAGGGTGACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47634625 503 + 51301725 ACAACACTAAACGGCTGCATGAGACAGTCTATTCGGATTACTGCTTTGACTCTGCTGTCCATTAttatcaccacacccagttctGTGATAACCACACCCAATTCAACACACCAGATTCTCGCCTTTGTCCACTGACTTCTGACAC-TGAGTCCTGCCACTCTGGGATCCAACTACACCCCTTACATTTAGG-TTCTCAGTTCAGTGGCAGCAGTTCCCACTGAAAGTTCTGGCCACTCTTAATACACCCTCTGTCCTTTCCCATCTTGTCTGTACCCTGGAGGCTGACGCTATGGATTGCATCACCAACATCTTCTTGCGTCTAGTTTCTGGTTGAGTTCAGCCATGGGAGTCACCGTCAAGAAAGCAGAGAGTGAGAAGAAAGCGAGGCTGGGGAATCTATTCCCACACATACACCCTGCCAGGCAAAAGACTGTGCTCCTCTACCCATGACATCAGCTTCCACGAAGCACTTCTCATCTCCCAGCTCCGTCC------------TCATGGTGACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315175 485 + 50890351 acaacactaaagggctgcatgagacagtctattcggattactgctttgactctgctgtccattatgatcaccacaccccgttctgtgataaccacacccaattcaacataccagattctcgcctttgtccactgacttccgacac-tgagtcctgccactctgggatccaactacaccccttacatttagg-ttctccgttcagtggcagcagttcccactggaagttctggccactcctaatacaccctctgtcctttcccactttgtctgtaccctggaggctgactctatggattgcatcaccaacatcttcttgcgtctagtttctggttgagttcagccatgggaggcaccgtcaagagagcagagggtgagaggagagagaggctggggaatctattcccacatatacaccctgccaggcaaaagactgtgctcctctacccatgacatcagcttcCATG------------------AGCTCCATCC------------TCAGGGTGACT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3558052 1350 - 49145316 T a score=216341.000000 s hg38.chr19_GL949753v2_alt 381337 71 + 796479 TTCCAGAGACCTAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC s panTro4.chr19 59574415 71 + 63644993 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490771 71 + 60714840 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTCCCAGTGACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184808 71 - 106955855 ttcCAGAGACCCAGTTACATT----CGGCTGTCACTAAAGAGTCAGCTACAGTCATCTAGCTGTTCCCAGTGACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444334 71 + 64156825 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551653 71 + 59248254 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635128 71 + 51301725 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315660 71 + 50890351 TTCCAGAGACCCAGTTACATT----CGGCTGTTACTAAAGAGTCAGCTACAGTCATCTAGCTGTTTCCAGTGACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556702 75 - 49145316 TTCCAGAGACCCAGGTACAGTTACCTGGCTGTTTCTAGAGACCCAGCTTTACTCACCTGACTGTTTCCAGAGACC i calJac3.chr22 T 1350 T 79 e canFam3.chr1 102922004 467 + 122678785 T a score=51086.000000 s hg38.chr19_GL949753v2_alt 381408 26 + 796479 ACCCCCAATCCC-----CCATAGCTGCCTGC s panTro4.chr19 59574486 26 + 63644993 ACCCCCAATCCC-----CCATAGCTGCCTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490842 26 + 60714840 ACCCCTAATCCC-----CCATAGCTGCCTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184879 26 - 106955855 ACCCCCAATCCC-----CCATAGCTGCCTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444405 31 + 64156825 ACCTCCAACCCCCCCACCCATAGCTGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551724 31 + 59248254 ACCTCCAACCCCCCCCCCCATAGCTGCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635199 27 + 51301725 ATCTCCAACCCC----TCCATAGCTGCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315731 26 + 50890351 ACCTCCAACCCA-----CCATAGCTGCCTGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102922004 467 + 122678785 T e calJac3.chr22 3556777 79 - 49145316 T a score=29738.000000 s hg38.chr19_GL949753v2_alt 381434 25 + 796479 CTGTTTGCAGAG----------------------ACCCAGCTACATG s panTro4.chr19 59574512 25 + 63644993 CTGTTTGCAGAG----------------------ACCCAGCTACATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490868 25 + 60714840 CTGTTTGCAGAG----------------------ACCCAGCTACATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184905 25 - 106955855 CTGTTTGCAGAG----------------------ACCCAGCTACATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444436 12 + 64156825 CTGTTTGCAGAA----------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551755 15 + 59248254 CTGTTTGCAGAA--------------------------------ATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635226 47 + 51301725 CTGTTTGCAGAGATCCACCTGGCTGTTTCCAGAGACCCGGCTACATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315757 15 + 50890351 CTGTTTGCAGAG--------------------------------ATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556698 25 - 49145316 CTGATTCCAGAG----------------------ACCCAGGTACAGT i calJac3.chr22 T 79 C 0 e canFam3.chr1 102922004 467 + 122678785 T a score=26371.000000 s hg38.chr19_GL949753v2_alt 381459 10 + 796479 CACCTAGCTG s panTro4.chr19 59574537 10 + 63644993 CACCTAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490893 10 + 60714840 CACCTGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184930 10 - 106955855 CACCTGGCTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55551770 10 + 59248254 CACCTGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635273 10 + 51301725 CACCTGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315772 10 + 50890351 CACCTGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556723 10 - 49145316 TACCTGGCTG i calJac3.chr22 C 0 I 95 s canFam3.chr1 102921537 10 + 122678785 CAACTAGATC i canFam3.chr1 T 467 C 0 e rheMac3.chr19 60444448 0 + 64156825 C a score=57615.000000 s hg38.chr19_GL949753v2_alt 381469 37 + 796479 TTTCTAGAGACCCGGCTACATCCA-------------------------------------------------------------CCTGGCTGTTTCC s panTro4.chr19 59574547 29 + 63644993 TTTCTAGAGACCCGGCTACATCCA-------------------------------------------------------------CCTGG-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490903 37 + 60714840 TTTCTACAGACCTGGCTACATCCA-------------------------------------------------------------CCTGGCTGTTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103184940 98 - 106955855 TTTCCAGAGACCCGGCTACATCCGATGGCTGTTTCCAGAGACCCGGCTACATCCGCTGGCTGTTTCCAGAGACCCGGCTACATCCCCTGGCTGTTTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55551780 37 + 59248254 TTTCCAGAGACCCGGCTACATCCA-------------------------------------------------------------CCTGGCTGTTTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635283 37 + 51301725 TTTCCAGAGACCCGGCTACATCCA-------------------------------------------------------------CCTGGCTGTTTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315782 37 + 50890351 CTTCTAGAGACCTGATTACGTCCA-------------------------------------------------------------CCTGGCTGTTTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556828 37 - 49145316 TTTCTAGAGGCCCAGCTACAGCCA-------------------------------------------------------------TCAGGCTATTTCC i calJac3.chr22 I 95 T 95 s canFam3.chr1 102921547 29 + 122678785 CTTGGAGAGAGCCTGTAGCATTTA---------------------------------------------------------------------TTTCC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60444448 0 + 64156825 C a score=39607.000000 s hg38.chr19_GL949753v2_alt 381506 20 + 796479 AGAGACCCGGCTACATCCAC s ponAbe2.chr19 56490940 20 + 60714840 AGAGACCCGGCTACATCCAC i ponAbe2.chr19 C 0 T 32 s nomLeu3.chr10 103185038 20 - 106955855 AGAGACCCGGCTACATCCGA i nomLeu3.chr10 C 0 I 30 s rheMac3.chr19 60444448 6 + 64156825 --------------ATCCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551817 20 + 59248254 AGAGACCCGGCTACATCCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635320 20 + 51301725 AGAGACCCGGCTACATCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315819 20 + 50890351 AGAGACCCGGCTACATCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556770 20 - 49145316 AGAGACCCAGCTACAGTTAC i calJac3.chr22 T 95 C 0 s canFam3.chr1 102921576 20 + 122678785 AAAGACCCAGCTACAGATTC i canFam3.chr1 C 0 C 0 e panTro4.chr19 59574576 0 + 63644993 C a score=83504.000000 s hg38.chr19_GL949753v2_alt 381526 27 + 796479 CTGGCTGTTTCCAGAGACCCGGCTACA s ponAbe2.chr19 56490928 27 + 60714840 CTGGCTGTTTCCAGAGACCCGGCTACA i ponAbe2.chr19 T 32 C 0 s nomLeu3.chr10 103185088 27 - 106955855 CTGGCTGTTTCCAGAGACCCGGCTACA i nomLeu3.chr10 I 30 C 0 s rheMac3.chr19 60444454 27 + 64156825 CTGGCTGTTTCCAGAGACCCGGCTACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551837 27 + 59248254 CTGGCTGTTTCTAGAGACCCGGCTACA i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47635340 27 + 51301725 CTGGCTGTTTCCAGAGACCCGGCTACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315839 27 + 50890351 CTGGCTGTTTCCAGAGACCCGGCTACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556790 27 - 49145316 CTGGCTGTTTCTAGAGACCCAGCTAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921596 27 + 122678785 CTAGTAGTTTCCAGAGACCCAGCTATA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59574576 0 + 63644993 C a score=10661.000000 s hg38.chr19_GL949753v2_alt 381553 5 + 796479 TCCAC s ponAbe2.chr19 56490955 5 + 60714840 TCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185115 5 - 106955855 CCCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444481 5 + 64156825 TCCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55438695 5 + 59248254 GTCAC i macFas5.chr19 n 0 C 0 s papAnu2.chr19 47635367 5 + 51301725 TCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315866 5 + 50890351 TCCAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556817 5 - 49145316 GTCAC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921623 5 + 122678785 GTCAC i canFam3.chr1 C 0 C 0 e panTro4.chr19 59574576 0 + 63644993 C a score=13597.000000 s hg38.chr19_GL949753v2_alt 381558 6 + 796479 CTGACT s panTro4.chr19 59574576 2 + 63644993 ----CT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103185120 6 - 106955855 CTGGCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444486 6 + 64156825 CTGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55438700 6 + 59248254 CTGGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635372 6 + 51301725 CTGGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315871 6 + 50890351 CTGGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556822 6 - 49145316 CTGCCT i calJac3.chr22 C 0 I 37 s canFam3.chr1 102921628 6 + 122678785 TTGGCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56490960 0 + 60714840 C a score=42731.000000 s hg38.chr19_GL949753v2_alt 381564 19 + 796479 GTTTCCAGAGACCCGGCTA s panTro4.chr19 59574578 19 + 63644993 GTTTCCAGAGACCCGGCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103185126 19 - 106955855 GTTTCCAGAGACCCGGCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444492 19 + 64156825 GTTTCTAGACACCCGGCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55438706 19 + 59248254 ATTTTCAGAAACCCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635378 19 + 51301725 GTTTCCAGAGACCCGGCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315877 19 + 50890351 GTTTCCAGAGACCTGGCTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921634 19 + 122678785 GTTTCCAGAGACCCAGCTA i canFam3.chr1 C 0 I 16 e ponAbe2.chr19 56490960 0 + 60714840 C e calJac3.chr22 3556828 37 - 49145316 I a score=2626.000000 s hg38.chr19_GL949753v2_alt 381583 7 + 796479 CATCCGC s panTro4.chr19 59574597 7 + 63644993 CATCCGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103185145 7 - 106955855 CATCCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444511 2 + 64156825 CA----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55438725 2 + 59248254 CA----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635397 7 + 51301725 CATCCAC i papAnu2.chr19 C 0 I 129 s chlSab2.chr6 47315896 7 + 50890351 CATCCAC i chlSab2.chr6 C 0 I 1 e canFam3.chr1 102921653 16 + 122678785 I e ponAbe2.chr19 56490960 0 + 60714840 C e calJac3.chr22 3556828 37 - 49145316 I a score=18511.000000 s hg38.chr19_GL949753v2_alt 381590 11 + 796479 TGGCTGTTTCT s panTro4.chr19 59574604 11 + 63644993 TGGCTGTTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490960 11 + 60714840 TGGCTGTTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185152 11 - 106955855 TGGCTGTTTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55438727 10 + 59248254 -GGTTGTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635533 11 + 51301725 TGGCTGTTTCT i papAnu2.chr19 I 129 C 0 s chlSab2.chr6 47315904 11 + 50890351 TGGCTGTTTCT i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102921653 16 + 122678785 I e calJac3.chr22 3556828 37 - 49145316 I e rheMac3.chr19 60444513 0 + 64156825 C a score=37061.000000 s hg38.chr19_GL949753v2_alt 381601 15 + 796479 AGAGACCCGGCTACA s panTro4.chr19 59574615 15 + 63644993 AGAGACCCGGCTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490971 15 + 60714840 AGAGACCCAGCTACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185163 15 - 106955855 AGAGACCCGGCTACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55438737 15 + 59248254 AGAGACCCAGCTACA i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47635544 15 + 51301725 AGAGACCCGGCTACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315915 15 + 50890351 AGAGACCCGGCTACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556865 15 - 49145316 AGAGACCCAGCTACC i calJac3.chr22 I 37 C 0 e canFam3.chr1 102921653 16 + 122678785 I e rheMac3.chr19 60444513 0 + 64156825 C a score=14551.000000 s hg38.chr19_GL949753v2_alt 381616 6 + 796479 TCCACC s panTro4.chr19 59574630 6 + 63644993 TCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490986 6 + 60714840 CCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185178 6 - 106955855 GCCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444513 6 + 64156825 TCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551864 6 + 59248254 TCCACC i macFas5.chr19 n 0 C 0 s papAnu2.chr19 47635559 6 + 51301725 TTCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315930 6 + 50890351 TCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556880 6 - 49145316 TCCAGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102921653 16 + 122678785 I a score=1036189.000000 s hg38.chr19_GL949753v2_alt 381622 352 + 796479 CAGCTGATTTCATTATCACTGACGCAGTCCCC-AGCTGCTCCTA--TGTCTCCTGGAAATCCCCAATTGCCCC-AGAGACTTTGTTGTAATTTTCTGTTCAGCTGACTCTAGGGATCTTCCTGGAGCTTAATT-GCTGACCTTAAGAATGGGCCATATTTATGCAACTGAGAGCAGAG-CCCAGTTCTCTGGGCCATGCTTTCCTTTGTACATCAACAAATAATCCTAAAGACCTAAAGTCTGGCAATCCCACGCCAGGTCCTAGGGTGCACAGGTCACCTGCATCCAGTCTTTGCCTTCACAGTTATTCAAAGCTGAGCAGGGAAAAAGGAGAGCCACAGAGAAG--TTCAGTGTTTTC s panTro4.chr19 59574636 352 + 63644993 CAGCTGATTTCATTATCACTGACGCAGTCCCC-AGCTGCTCCTA--TGTCTCCTGGAAATCCCCAATTGCCCC-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAGCTTAATT-GCTGACCTTAAGAATGGGCCATATTTATGCAACTGAGAGCAGAG-CCCAGTTCTCTGGGCCATGCTTTCCTTTGTACATCAACAAATAATCCTAAAGACCTAAAGTCTGGCAACCCCACGCCAGGTCCTGGGGTGCACAGGTCACCTGCATCCAGTCTTTGCCTTCACAGTTATTCAAAGCTGAGCAGGGAAAAAGGAGAGCCACAGAGAAG--TTCAGTGTTTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56490992 349 + 60714840 CAGCTGATTTCATTATCACTGACGCAGTCCCC-AGCTGCTCCTA--TGTCTCCTGGAAATCCCCAATTGCCCC---AGACTTTGTTGTAATTTTCTTCTCAGCTGACTCTAGGGATCTTCCTGGAGCTTAATT-GCTGACCTTAAGAATGGGCCATATTTATGCAACTGAGAGCAGAG-CCCAGTTCTCTGGGCCATGCTTTCCTTTGAACATCAACAAATAATCCTAAAGACCTAAAGTCTGGCAACCCCATGCCAGGTCCTAGGGTGCACAGGTAACTTGCATCCAGTTTTTGCC-TCACAGTTGTTCAAAGCTGAGCAGGGAAAAAGAAGAGCCACAAAGAAG--TTCAGTGTTTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185184 352 - 106955855 CAGCTGATTTCTTTATCACTGATGCAGTCCCC-AGCTGCTCCTA--TGTCTCCTGGAAATCCCCAGTTGCCTC-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAGCTTAATT-GCTGACCTTAAGAATGGGCCATATTTACGCAGCTGAGAGCGGAG-CCCAGTTCTCTGGGCCATGCTTTCCTTTGTACAtcaacaaataatcctaaagacctaaagtctggcaaccccatgccgggtcctagggtgcacaggtcacctgcatccagtttttgccttcacggttgttcaaagctgagcagggaaaaAGAAGAGCCACAAAGAAG--TTCAGGGTTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444519 352 + 64156825 CAACTGATTTCATTATCATTGACGCAGTCCCC-AGCTGCTCCTA--TGTCTCGTGGAAATCCCCAATTGCCCC-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAACTTAATT-GCTGACCTTAAGAATGGGCCGTATTTATGCAACTGAAAGCAGGG-CCCAGTTCTCTGGGCAATGCTTTCCTTTGTACCtcaacaaataatcctaaagacctaacgtctggcaaccccatgccaggtcatagggtgcacaggtcacctgcatccagtttttaccttcacagttgctcaaagctgagcagggaaaaAGAAGAGCCACGGATAAG--TTCAGTGTTTTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55551870 352 + 59248254 CAACTGATTTCATTATCATTGACGCAGTCCCC-AGCTGCTCCTA--TGTCTCGTGGAAATCCCCAATTGCCCC-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAACTTAATT-GCTGACCTTAAGAATGGGCCGTATTTATGCAACTGAAAGCAGGG-CCCAGTTCTCTGGGCAATGCTTTCCTTTGTACCTCAACAAATAATCCTAAAGACCTAACGTCTGGCAACCCCATGCCAGGTCATAGGGTGCACAGGTCACCTGCATCCAGTTTTTACCTTCACAGTTGCTCAAAGCTGAGCAGGGAAAAAGAAGAGCCACGGATAAG--TTCAGTGTTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635565 352 + 51301725 CAGCTGATTTCATTATCATTGACGCAATATCC-AGCTGCTCCTA--TGTCTCGTGGAAATCCCCAATTGCCCT-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAACTTAATT-GCTGACCTTAAGAATGGGCCGTATTTATGCAACTGAAAGCAGGG-CCCAGTTCTCTGGGCAATGCTTTCCTTTGTACCTCAACAAATAATCCTAAAGACCTAACGTCTGGGAACCCCATGCCAGGTCGTAGGGTGCACAGGTCACCTGCATCCAGTTTTTACCTTCACAGTTGCTCAAAGCTGAGCAGGGAAAAAGAAGAGCCACAGATAAg--ttcagtgttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47315936 352 + 50890351 CAACTGATTTCATTATCATTGACGCAGTCCCC-AGCTACTCCTA--TGTCTCCTGGAAATCCCCAATTGCCCC-AGAGACTTTGTTGTAATTTTCTGCTCAGCTGACTCTAGGGATCTTCCTGGAACTTAATT-GCTGACCTTAAGAATGGGCCATATTTATGCAACTGAAAGCAGGG-CCCAGTTCTCTGGGCAATGCTTTCCTTTGTACCTCAACAAATAATCCTAAAGACCTAACGTCTGGCAACCCCATGCCAGGTCGTAGGGTGCACAGGTCACCCGTATCCAGTTTTTACCTTCACAGTTGTTCAAAGCTGAGCAGGGAAAAAGAAGAGCCACAGATAAG--TTCAGTGTTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3556886 347 - 49145316 CAGCTGATTTCCTGAGTAGTGATGCAGACCCCAAACTGGTCCCAGGTGTCTCCGGTGAACCTCCAGTGACCCC-AGAGACTTTGCT-TAATTATCTTCCCTGCTGACCCCAAAAACCTTCCCAGAAGTCAAGT-GATAACCTTGAGACTGCGCTATACACACACAGCTGGCAGCTATG-CCCGATTCTCTGCATCACGCTCTCCTCTG-GCAtcaataaattattttgaagacctcacatctggcagccccgttcctggtcct-gggtgcacaggtctcctggacccagcctctgccttcacagttgttcagagctgagtaaaggaaacaga-ACCTACAAAGGAGGTGTCAGA------ i calJac3.chr22 C 0 C 0 s canFam3.chr1 102921669 310 + 122678785 CAGATGATT---------------------CC-AGT----------TGTGTCCTGTGTATCCCCAACTGCCCCTAGAGGCTCCGTTTTAATTTTCCACTCAGCTGGCTCTAAAGA-CTTTCCAGAGTTTGGTTAGTTGATCTTGAACTGGGACTATACTTGCGCAGCTAATATCTGAGACACTGTTTCCTGCACTATGCTTCTCTTTGTTCATCAATAAAAGTTTTCACAGGCCCACTCTGCAGCAGTCCTGTGCAAGGAACCAGAGTACACAGGTAACTCGGTCCCAGTCTCTGC--TCAGAGTT--------TTGAGCAGAAAACAAG-------ACAAAGAATGCATCAGTGTTTTC i canFam3.chr1 I 16 I 56548 a score=335327.000000 s hg38.chr19_GL949753v2_alt 381974 126 + 796479 CTTTTTATCTTTTTAAAAAATCC-TTTTTTATCCTTAAAATGATttaatcaaccaagattgtatatatt-gaggtgtacaacatgatgatttgatatacgtatacattgtgtaatgattgccacaatc s panTro4.chr19 59574988 126 + 63644993 CTTTTTATCTTTTTTAAAAATCC-TTTTTTATCCTTAAAATGAtttaatcaaccaagattgtatatatt-gaggtgtacaacatgatgatttgatatacgtatacactgtgtaatgattgccacaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56491341 127 + 60714840 CTTTTTATCTTTTTAAAAAATCCTTTTTTTATCCTTAAAATGAtttaatcaaccaagattgtgtatatt-gaggtgtacaacatgattatttgatatacgtatacattgtgtaatgattgccacaatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185536 127 - 106955855 CTTTTTATCTTTTTAAAAAATCCTTTTTTTATCCTTAAAATGATTTAATCAACCaagattgtgtatatt-gaggtgtacaacatgacgattttatatacatatacattgtgtaatgattgccacaatc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444871 127 + 64156825 CTTTTTATCCTTTTAAAAAATCATTCttttattcttaaaatgatttaatcaaccaagattgtatatact-gaggtgtacaacatgatgatttgatatatgtatacattgtgtaatgatttccacaatc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55552222 127 + 59248254 CTTTTTATCCTTTTAAAAAATCATTCttttattcttaaaatgatttaatcaaccaagattgtatatact-gaggtgtacaacatgatgatttgatatatgtatacattgtgtaatgatttccacaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47635917 127 + 51301725 ctttttatccttttaaaaaatcgttcttttattcttaaaatgatTTAATCAACCAAGATTGTATATACT-GAGGTGTACAAcgtgatgatttgatatatgtatacattgtgtaatgatttcCACAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47316288 127 + 50890351 CTTTTTATCCTTTTAAAAAATCATTCttttattcttaaaatgatttaatcaaccaagattgtatatact-gaggtgtacaacgtgatgatttgatatatgtatacattgtgtaatgatttccacaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3557233 108 - 49145316 --------------AAAAAAGCATTTTct--tttttaa----atttaattgatcaagatggtacatattcaaggcgtaaaatgtgataatttgttatacgcatacattgtgcaatgataaccacaatc i calJac3.chr22 C 0 I 97657 e canFam3.chr1 102921979 56548 + 122678785 I a score=1428326.000000 s hg38.chr19_GL949753v2_alt 382100 640 + 796479 aaa----ttagcacactcaggacaaccagtgccctaaataGATCCCCTGGATTTGTACACGTTATGCCTTAAAGTTGGTGCCAGAGTTCCATTTAtttatttttatccatatataatagttgtatataggtttggggtacttatgatattttgatacttgtatgcaatgggtaataataaaatcagggtaattagaatatccatcacctcaaatatttatcttttctttttgttggggagcattacaattcttttattctagttgttttgaaatacacaatatattattgttaactatacttcccctactgtactgtcaaatactc--agttatttctcctatccagctgtatttctatactccgtaactaacatctccttatctcccaccctttccagctctagtaaccaccagtctacaca----------------------------------------------------------------------------------------ttttttttttttgagacagagtcttgctgtgtcacccaggatggaatgcagtggcgtgatcttggctcactgcaacctttgcctcctgggttcaagagattcgcctgcctcagcctcctgagtagctgggattacagatgcatgccaccacgccaggctaaagacagggtttcaccatgttggccaggatggtctcgaactcttgacctcaagtgatccaccc s panTro4.chr19 59575114 650 + 63644993 aaa----ttagcacactcaggacaaccagtgccctaaataGATCCCCTGGATTTGTACACATTATGCCTTAAATTTGGTGCCAGAGTTCCATTTAtttatttttatccatatataatagttgtatataggtttggggtacttacggtattttgatacttgtatgcaatgggtaataataaaatcagggtaattagaatatccatcacctcaaatatttatcttttctttgtgttggggagcattacaattcttttattctagttgttttgaaatatacaatatattattgttaactatactttccctactgtactgtcaaatactcaaagttatttctcctatccagctgtatttttatactccgtaactaacatctccttatctcccaccctttccagctctagtaaccaccagtctacaca--------------------------------------------------------------------------------ttttttttttttttttttttgagacagagtctcgctgtgtcacccaggatggaatgcagtggcgtgatcttggctcactacaacctttgcctcctgggttcaagcaattcgcctgcctcagcctcctgagtagctgggattacagatgcatgccaccacgcctggctaaagagagggtttcaccatgttggccaggatggtctcgaactcttgacctcaagtgatccaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56491468 640 + 60714840 aaa----ttaGCACGCTCAGGACAACCAGTGCCCTAAATAGATCCCCTGGATTTGTACACGTTATGCCTTAAAGTTGGTGCCAGAGTTCCATTTAtttatttttatccatatataatagttgtatataggttttgggtacttatgatattttgatacttgtatgcaatgggtaataataaaatcagagtaattagaatatccatcacctcaaatatttatcttttctttgttttggggagcattacaattcttttattctagttgttttgaaatatacaatatattattgttaactatactttctctactgtactgtcaaatactcaaagttatttctcctatccaactgcatttctatactccgtaacgaacatctccttatcccccaccctttccagctctagtaaccaccagcctacacc------------------------------------------------------------------------------------------ttttttttttgagacagagtctcgctgtgtcactcaggatggagtgcagtggcgtgatcttggctcactgcaacctttgcctcctgggttcaagcgatttgcctgcctcagcctcctgagtagctaggattacaggtgcacgccaccacgccgggctaaagacagggtttcaccatgttggccaggatggtctcaaactcttgacctcaagtgatccaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103185663 602 - 106955855 aaa----ttagcacactcaGGACAACCAATGCCCTAAGTAGATCCCCTGGATTTGTACATGTTATGCCTTAAAGTTGGTGCCAGAGTTCCATCTATTCAtttttatccatatatgatagttgtatataggttgggggtacttatgatattttgatacttgtatgcaatgggtaataataaaatcagggtaattagaatatccatcacctcaaatatttatcttttctttgtgttg-------------------------------------------aatgtattattgttaactatactttccctactgtactgtcaaatactc--agttatttctcctatccagctgtatttctatactccgtaactaacatctccttatcccccaccctttccagctctagtaaccaccagtctacaca-----------------------------------------------------------------------------------tttttttttttttttttgagacagagtcttgctgtgtcacccaggatggagtgcagtggcgtgatcttggctcactgcaacctttgcctcctgggttcaagcgattcgcctgcctcagcctcctgagtagctgggattacaggtgcgtgccaccatgctgggctaaagacagggtttcaccatgttggccaggatggtctcaaactcttgacctcaagtgatccactc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60444998 653 + 64156825 aaatgagttagcacactcagcacAACCAATGCCATAAGTAGATCCCCTGGATTTGTACATGTTATGCCTTAAAGTTGGTGCCAGAGTTCTCTTTAtttatttttatccatatatgacagttgtatataggtttggggtacttatgatgtttcggtacttgtatacaataggtaacaataaaatcagggcaattagggtatccattacctcaaatatttatctttgctttgtgttggggagcattacaattcttttcttctagttgttttgaaatatgcaatatattattgttaactatgctttccctactgtactgtcaaatactcaaagttatttctcctatccagctgtatttctgtactccataactaacatctccttatcccccaccctttccagctctagtaaccactagtctacatc---------------------------------------------------------------------------------tttttttttttttttttttgatacagagtcttgctgtgtcacccaggatggagtgcagtggcgccatcttgcctccctgcaaactttgcctccctgattcaagcaatttgcctgcctcagcctcccgagtagatgggattacaggtgcgtgccaccatggccagctaaagatggggtttcaccatgttggccaggatggtctcaaactgctgacctcaagtgatccatct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55552349 734 + 59248254 aaatgagttagcacactcagcacAACCAATGCCATAAGTAGATCCCCTGGATTTGTACATGTTATGCCTTAAAGTTGGTGCCAGAGTTCTCTTTAtttatttttatccatatatgacagttgtgtataggtttggggtacttatgatgtttcggtacttgtatacaataggtaacaataaaatcagggcaattagggtatccattacctcaaatatttatctttgctttgtgttggggagcattacaattcttttcttctagttgttttgaaatatgcaatatattattgttaactatgctttccctactgtactgtcaaatactcaaagttatttctcctatccagctgtatttctgtactccataactaacatctccttatcccccaccctttccagctctagtaaccactagtctacATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttttttttttttttttttttttttttgatacagagtcttgctgtgtcacccaggatggagtgcagtggcgccatcttgcctccctgcaaactttgcctccctgattcaagcaatttgcctgcctcagcctcctgagtagctgggattacaggtgcgtgccaccatgaccagctaaagatggggtttcaccatgttggccaggatggtctcaaactgctgacctcaagtgatccatct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47636044 651 + 51301725 AAATTAGTTAGCACACTCAGCACAACCAATGCCATAAATAGATCCCCTGGATTTGTACATGTTATGCCTTGAAGTTGGTGCCAGagttctctttatttatttttatccatatATGACAGTTGTATATAGGTTTGGGGTACTTATGGTGTTTCGGTACTTGTATACAATAGGTAACAATAAAATCAGGGCAATTAgggtatccattacctcaaatatttatcttttctttgtgttggagaGCATTACAATTCTTTTCTTctagttgttttgaaatatgcaatatattattgttaactatactTTCCCTACTGTACTGTCAAATACTCAAAGTTATTTCTCCTATCCAACTGTAGTTTTGTACTCCATAACTAACATCTCCTTATCCCCCACCCTTTCCAGCTCTAGTAACCACTagtctacatc------------------------------------------------------------------------------ttttttttttttttttttttttgagacagagtcttgctgtgtcacccaggatggagtgcagtggcgcgatcttgcctccctgcaacctttgcctccctgattcaagcaatttgcctgcctcagcctcctgagtagatgggattacag----gtgccacc-tgACTGgctaaagacagggtttcaccatgttggccaggatggtcttgaactcctgacctcaagtgatccatct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47316415 650 + 50890351 aaa----ttagcacactcagcacAACCAATGCCATAAATAGATCCCCTGGATTTGTACATGTTATGCCTTAAAGTTGGTGCCAGAGTTCTTTTTAtttatttttatccatatacgatagttgtatataggtttggggtacttacgatgtttcggtacttgtatacaatgggtaacaataaaatcagggcaatta-agtgtccatcacctcaaatatttatctttgctttgtgttggggagcattacaattcttt-----tagttgttttgaaatatacaatatattattgttaactatactttccctactgtactgtcaaatactcaaagttatttctcctatccagctgtatttctgtactccataactaacatctccttatcccccaccctttccagctctggtaaccgctagtgtacatc--------------------------------------------------------------------------ttttttttttttttttttttttttttgagacagagtcttactgtgtcacccagcatggagtgcagtggcgcgatcttgcctccctgcaacctttgcctccctgattcaagcaacttgcctgcctcagcctcctgagtagttgggattacgggtgcgtgccaccatgaccagctaaagatggggtttcaccatgttggccaggatggtctcgaactcctgacctcaagtgatccatct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=514511.000000 s hg38.chr19_GL949753v2_alt 382740 297 + 796479 gcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcccggcc-ttttttttt--tcttttgagacaaggtattgctctgttgcccaagctggaatgcagtgacacaatcatggctcactgcagcctcaaccctccagggctcaagcgatcctcctgcctcagactcccgagtagctaggaccacagtgcacaccaccacgcccaactaatttttgtatgtttcgtagagaaggggttttgccacattggccaggctggtctggaactcctgacctcaagtgaaccacct s panTro4.chr19 59575764 298 + 63644993 acctcagcctcccaaagtgctgggattacaggcgtgagccaccacgcccggcc-ttttttttt-ctcttttgagacaaggtattgctctgttgcccaagctggaatgcagtgacacaatcatggctcactgcagcttcaaccctccagggctcaagcaatcctcctgcctcagactcctgagtagctaggaccacagtgcacaccaccacgcccaactaatttttgtatgtttcgtagagaaggggttttgccacattggccaggctggtctggaactcctgacctcaagtgatccacct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56492108 299 + 60714840 acctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc-tttttttttttttttttgagacgaggtattgttctgttgcccaggctggaatgcagtgacacaatcatggctcactgcagtctcgaccctccagggttcaagcgatcctcctgcctcagactcctgagtagctgggaccacagtgcacaccacctcgctcaactaatttttgtacgttttgtagagaaggggttttgccacattggccaggctggtctggaactcctgacctcaagtgatccacct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60445651 298 + 64156825 gcctcaccttctcaaagtgctgggattacaggcgtgaatcaccgcgcctggcc-ttttttttttttcttttgagacaaggtattgctctgttgcccaggctggaatgcagtgacacaatcatggctcactgcagcttcgaccctccaggcttcaagcgatcctcctgcctcagactcacgaggagctgggaccacagtgcacaccatcacgcctgactgatttttgtatgttttgtagagtagggg-tttgccacattggccaggctggtctcgaactcttgacctcaagtgacccaccg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55553083 299 + 59248254 gcctcaccttctcaaagtgctgggattacaggcgtgaatcaccgcgcctggcctttttttttttttcttttgagacaaggtattgctctgttgcccaggctggaatgcagtgacacaatcatggctcactgcagcttcgaccctccaggcttcaagcgatcctcctgcctcagactcacgaggagctgggaccacagtgcacaccatcacgcctgactgatttttgtatgttttgtagagtagggg-tttgccacattggccaggctggtctcgaactcttgacctcaagtgacccaccg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47636695 299 + 51301725 gcctcagcctctcaaagtgctgggattacaggcgtgaatcaccgcgcctggcctttttttttttttcttttgagacaaggtattgctctgttgcccaggctggaatgcagtgacacaatcatggctcactgcagcttcgaccctccaggcctcaagcgatcctcctgcctcagactcacgagtagctaggaccatagtgcacaccaccacgcctgactgatttttgtatgttttgtagagtagggg-tttgccacattggccaggctggtctcaaactcttgacctcaagtgacccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47317065 297 + 50890351 gcctcggcctctcaaagcgctgggattacaggcatgagccaccacgcctggcc---ttttttatttcttttgagacaaggtattgctgtgttgcccagactggaatgcagcgacacaatcatggctcactgcagcctcgcccctccaggctacaagcgatcctcctgcctcagactcacgagtagctgggaccacagtgcacaccaccacgcctgactgatttttgtatgttttgtagagtaggggttttgccacattggccagtctggtctcgaactcttgacctcaagtgacccacct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e nomLeu3.chr10 103186265 0 - 106955855 C a score=226245.000000 s hg38.chr19_GL949753v2_alt 383037 91 + 796479 gccttggcctcccaaatcactgggattacaggcacaagccaccacacctggccaaccagtctactctctctgtttaggaatccacttcttt s panTro4.chr19 59576062 91 + 63644993 gccttggcctcccaaatcactgggattacaggcacaagccaccacacccggccaaccagtctactctctctgtttaggaatccacttcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56492407 91 + 60714840 gccttggcctcccaaatcactgggattgcaggcacgagccaccacatctggacaaccagtctactctctctgtttaggaatccacttcttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103186265 91 - 106955855 accttggcctcccaaatcactgggattacaggcacgagccaccacacccggccaaccagtctactctctctgtttgggaatccacttcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60445949 91 + 64156825 gccttggcctcccaaatcactgggattacaggcatgagccatcacacccggtcaaccagtctacgctctctgtttaggaatccacctcttt i rheMac3.chr19 C 0 I 2877 s macFas5.chr19 55553382 91 + 59248254 gccttggcctcccaaatcactgggattacaggcatgagccatcacacccggtcAACCAGTCTACGCTCTCTGTTTAGGAAtccacttcttt i macFas5.chr19 C 0 I 2500 s papAnu2.chr19 47636994 91 + 51301725 gccttggcctcccaaatcactgggattacaggcatgagccatcacacccggtcAACCAGTCTACTCTCTCTGTTTAGGaatccacttcttt i papAnu2.chr19 C 0 I 2001 s chlSab2.chr6 47317362 91 + 50890351 gccttggcctcccaaatcactgggattacaggcacgagccaccacacccggccaaccagtctactctctctgtttaggaatccacTTCttt i chlSab2.chr6 C 0 I 1663 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=911958.000000 s hg38.chr19_GL949753v2_alt 383128 1798 + 796479 agctcccacgtatgagtgagaacattcgagatttgtctttctgttcctggcttatttcactgaccataatgacctccagttccaactatgttgctgtaaatgtcaggatttcattcttttttatggatgacccctcttccattgtgtatacataccacattttctttacccttttatccactgatggacacttaggttgattccgtatgctgacttgtgaagagtgctgcaataaacacacgggtgcagggactcttgtgatgtcctgagatttttttcctttgcatgaatattcagtagtgaactcactggattttacgataattgcagtttcagtatcttgaggaatctccgtg-------tttttttttttttttctttttttgagacagagtctcactgtcacccaggctggagtgcagtggcgtgatctcggctcactgtaggctctg-cccctcggggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggtgcctgccacctcgcctggctaattttttgtatttttagtagagacagggtttcaccctgttggccaggatggtctcgatctcctgacctcgtgatccgcccgccttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccggaatctccatgttttccataatggctgtactaatttatattcccaccaacagtgtctaagagttattttgtcagcacatcctcaccagcatgtttttattttattttatt----gatctatttatttatttgtttgtttgtttagatggagtctcactctgtcgcccaggctggagtgcagtggtgccatctcagctcactgcaacctccagctcctgggtgcaagcgattctcttccctcagcctcccgagtagcaggagcctcctgattacaggcgagcgccaccacgcccggctaatttttgtctttttagtagagacgaggtttcaacatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgagattacaggcgtgaaccactgtgcccagcccagcatgtttttatatgtttctttgataatagacattttaactgaaataagatgatactcattgtagtttcgatttg-atgccagtgatgattgtgggtttttgtttgtttgtttgtgttttgagatgaagtctcgctctgtcacccagattggagtgcagtagtgtgatcttggctcactgcaacctctgcctactgggttcaagtgagcctcctgcctcagcctcctcagtagatgggactacaggtgtatgccaccacgcccagctgtttttttttctttttttgtatttttggtagagatgaggtttcaccatgttgcccaggctggtctcaaactcctgggttcaagtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcttggccgatgattagtg-----------ttttatatagctgttggccatctgtacattttcttttgagaagcaactattcagatgctttgcatacttgttaatggaattatctggggattttttgttgaggtgtgtttcttctaggcctaatttgttgatagttttaatgatgaagggatgttgaattttgtcaaatg--tttttttaacatctattgtgatgatcatataattttttttttttttttttagacagagggtctctccttcacccaggcaggagtgcagtggcgcgatcttggctcactgcaacttcc s panTro4.chr19 59576153 1791 + 63644993 agctcccacgtatgagtgagaacattcaagatttgtctttctgttcctggtttatttcactgaccataatgacctccagttccaactatgttgctgtaaatgtcaggatttcattcttttttatggatgacccctcttccattgtgtatacataccacattttctttacccttttatccactgatggacacttaggttgattccgtatgctgacttgtgaagagtgctgcaataaacacaccgggtcagggactcttgtgatgtcctgagatttttttcctttgcatgaatatccagtagtgaactcactggattttacgataattgcagtttcagtatcttgaggaatctccatg---------tttttttttttttctttttttgagacagagtctcactgttgcccaggctggagtgcagtggcgtgatctcggctcattgtaggctgtg-ccccctggggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctctatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagcctctgcgcccggccggaatctccatgttttccataatggctgtactaatttatattcccaccaacagtgtctaagagttattttgtcagcacatcctcaccagcatgtttttattttattttatt----gatctatttatttatttgtttgtttgtttagatggagtctcactctgtcgcccaggctggaatgcagtggtgccatctcagctcactgcaacctccagctcctgggtgcaagcgattctcttccctcagcctcccgagtagcaggagcctcctgattacaggggagcgccaccatgcccggctaatttttgtctttttagtagagacgcggtttcaacatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgagattacaggcgtgaaccactgtgcccagcccagcatgtttttatatgtttctttgataatagacattttaactgaaataagatgatactcattgtggtttcgatttg-atgccagtgatgattgtgggtttttgtttgtttgtttgtgttttgagatgaagtctcgctctgtcacccagactggagtgcagtagtgtgatcttggctcactgcaacctctgcctactgggttcaagtgagcctcctgcctcagcctcctcagtagatgggactacaggtgtatgccaccgcgcccagct-tttttttttctttttttgtatttttggtagagatgaggtttcaccatgttgcccaggctggtcttgaactcctgggttcaagtgatccacctgctttggcctctcaaagtgctgggattacaggtgtgagccaccgcgcttggccgatgattagtg-----------ttttatatagctgttggccatctgtacattttcttttgagaagcaactattcagatgctttgcacacttgttaatggaattatctggggattttttgttgaggtgtgtttcttctaggcctaatttgttgatagttttaatgatgaagggatgttgaattttgtcaaatg--tttttttaacatctattgtgatgatcatataa----ttttttttttttttagacagagggtccctccgtcacccaggcaggagtgcagtggcgcgatcttggctcactgcaacttcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56492498 1812 + 60714840 agctcccacatatgagtgagagcatttgagatttgtctttctgttcctggcttatttcactgagcataatgacctctggttccaactatgttgctgtaagtgtcaggatttcattcttttttatggatgacccctcttccattgtgtatatataccacattttctttacccttttatccattgatggacacttaggttgattctgtatgctggcttgtgaagagtgctgcaataaacacacgggtgcagggactcctgtgatgtcctgagatttttttcctttgcgtgaatatacagtagtgaactcactggattttacgataattgcagtttcagtatcttgaggaatctccatggttttttttgttttttttttttttttttttgagatggagtctcgctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaggctctgcccccccggggttcacgccattctcctgcctcagcctcccgagtagctgggactataggtgcccgccatcgcgcccggctaattttttgtatttttagtagagatggggtttcacggtattaaccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctggaattacaggcgtgagccactgcgcccggccggaatctccatgttttctataatggctgtactaatttatattcccaccaacagtgtataagagttattttgtcaccacatcctcaccaacatgttgttattttattttatttatatatttatttatttatttatttatttatttagatggagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcagctcactgcaacctccagctcctgggtataagcgattctcctccctcagcctcctgagtagcaggagcctcctgattacaggcgagcgccaccacacccggctaatttttgtctttttagtagagatggggtttcaacatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgaaccactgcgtccagcccagcatgtttt--tatgtttctttgataatagacattttaactgaaataagatgatactcattgtggtttcgattcgtatgccagtgatgattgtgggtttttgtttgtttgtttgtgttttgagatgaagtctcgctctgtcacccagactggagtgcagtagtgtgatcttggctcactgcaacctctgcctactgggttcaagtgagcctcctgcttcagcctcctcagtagatgggactgcaggtgtgtgccaccatgcccagat---------tttgtttgtgtatttttggtagagatgaggtttcaccatgttgcccaggttggtctcaaactcctgggttcaagtgatccacctgctttggcctcccaaagtgctgggattacaggtgtgagccagcacgctcggctgatgattagtgttttgaacactttttatatagctgttggccatctgtacattttcttttgagaaacgactattcagatgctttgcacacttgttaatggaattatctgggaattttttgttgaggtgtgtttcttctaggcctaatttgttgatagtttttatgatgaagggatgttgaattttgtcaaatgcttttttttaacatctgttgtgatgatcatataa-ctttttttttttttttaagacagagggtctctctgttgcccaggctggagtgcagtggcgcgatcttggctcactgcaacctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103186356 1789 - 106955855 agctcccacgtatgagtgagaacattcgagatttgtctttctgttcctggcttatttcactgaccataatgacctctggttccaaccatgttgctgtagatgtcagaatgtcat--ctttttctggatgacccctcttccattgtgtatatataccacattttctttacccttttatccactgatggacacttaggttgattctgtatgctggcttgtgaagagtgctgcaataaacacatgggtgcagggactcttgtgacgtcctgagatttttttcctttgtgtgaatattcagtagtgaactcactggattttacgataattgcagtttcggtatcttgaggaatctccacg-----attttttttttttttttttttttttgagatggagtctcgctgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaggctctg-ccccccggggttcacgccgttctcctgcctcagcctcccgagtagctgagactacaggcgcccgccatctctcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctggga-tacaggcgtgagccaccgcaaccagccggaatctccatgttttccataatggctgtactaatttatattcccaccaacagtgtataagagttattttgtcaccacatcctcaccagcatgttgttattttattttatt------------tatctatttatttagttgtttagatggagtctctctctgttgcccaggctggagtgcagtggcgccacctcagctcactgcaacctccagctcctgggtgcaagcgattctcctccctcagcctcctgagtagcaggagcctcctgattacaggcgagcgccaccacgcccagctaatttttgtttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcgtgatccgcctgcctcagcctcccaaagtgctgggattacaggcgtgaagcactgtgcccagcccagcatgtttttatatgtttctttgataatagacattttaactgaaatatgatgatactcattgtggtttcgatttgtatgccagtgatgattgtgggtttttgtttgtttgtttgtgttttgagataaagtctcgctctgtcacccagacttgagtgtagtggtgtgaacttggctcactgcaacctctgcctactgggttcaagtgagcctcctacctcagcctcctcagtagatgggactacaggtgtatgccaccacgctcagct-------ttttgtttgttgtatttttggtagagatgaggtttcaccaagttgcccaggttggtctcaaactcctggattcaagtgatccacctgctttggcctcccaaagtgctgggattacaggcgtgagccaccacgctcggccgatgattagtgttttgaacactttttatatagccgttggccatctgtacattttcttttgagatacgactattcagatgctttgcacacttgttaatggaattatctggggattttttgttgaggtgtgttttttctaggcctgatttgttcatagtttttatgatgaagggatattgaattttgtcaagtgcttttttttaacatctattgtgatgatcatataa----tttttttttttt---gacagagggtctctccgttgcccaggcaggagtgcagtggcgcgatcttggcttactgcaacctcc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e chlSab2.chr6 47317453 1663 + 50890351 I e papAnu2.chr19 47637085 2001 + 51301725 I e macFas5.chr19 55553473 2500 + 59248254 I e rheMac3.chr19 60446040 2877 + 64156825 I a score=48624.000000 s hg38.chr19_GL949753v2_alt 384926 63 + 796479 acctcctgggttcaagagattctcctgtctcagcctcccgagtagctgg-actaccggtgcaca s panTro4.chr19 59577944 63 + 63644993 gcctcccgggttcaagagattctcctgtctcagcctcccgagtagctgg-actaccggtgcaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56494310 63 + 60714840 gcctcccaggttcaagagattctcctatctcagcctcccgagtagctgg-actactggtgcaca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103188145 63 - 106955855 gtctctcgggttcaagaggttctcctatctcagcctcccgagtagctgg-actaccggtgcaca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55555973 62 + 59248254 atctcctgacctc--gtgatccgccctcctcggcctcccaaagtgctagcattacaggcgtgag i macFas5.chr19 I 2500 C 0 s papAnu2.chr19 47639086 62 + 51301725 atctcctgacctc--gtgatccgccctcctcggcctcccaaagtgctggcattacaggcgtgag i papAnu2.chr19 I 2001 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e chlSab2.chr6 47317453 1663 + 50890351 I e rheMac3.chr19 60446040 2877 + 64156825 I a score=1108225.000000 s hg38.chr19_GL949753v2_alt 384989 494 + 796479 ccaccacacccagttaatattttgcatttttgagagagatggggtttcatcatgttggccaggctgatctcgatctcctgacctcaagtgatccacccatctcaatctcccaaagtgctgggattgcaggcatgaaccaccgcgcctgcccatgattatatg-ttttttgttcttccttctgttgacatgagatatcatatctattgatttgagaatgttgaaatatcctCCCTTCTGGCTGCTGTGTGGACTGCGAGCTCTCCTACCCTCCATGGTCTTCCAATCCCACTGTCCCCAGGCCAACTGCTCCCAGACTATGCAGTAGTCTCATGTGCATGGAGCAGTTGTAATTGATCCTGGTGGTGACAGAGGGGTTGGTGTTTCAGGCATGGCACAGTCAGAGGAGGTCCCAAGGAGAGACCAAGAGGTAAACTTAAGTAGAGCTGCACCCCTTCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATACGcc s panTro4.chr19 59578007 494 + 63644993 ccaccacacccagttaatattttgcatttttgagagagatggggtttcaccatgttggccaggctgatctcgatctcctgacctcaagtgatccacccatctcaatctcccaaagtgctgggattgcaggcgtgagccactgcacctgcctatgattatatg-ttttttgttcttccttctgttgacatgagatatcatatctatttatttgagaatgttgaaatatcctCCCTTCTGGCTGCTGTGTGGACTGTGAGCTCTCCTACCCTCCATGGCCTTCCAATCCCACTGTCCCCAGGCCAACCGCTCCCAGACTATGCAGTAGTCTCATGTGCATGGAGCAGTTGCAATCGATCCTGGTGGTGACAGAGGGGTTGGTGTTTCAGGCATGGCACAGTCAGAGGAGGTCCCAAGGGGAGACCAAGAGGTAAACTTAAGTAGAGCTGCACCCCTTCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATATGcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56494373 492 + 60714840 ccaccacacccagttaatattttgtatttttaagagagacggggtttcaccatgttggccagcctgatctcgaactcctgacctcaagtga-ccacccatctcaatctcccaaagtgctgggattgcaggcatgagccaccgcgcctgcccatgattatatg-ttttttgttcttccttctgttgacatgaggtatcatatctattgatttgagaatgttgaaatatcctCCCTTCTGGTTGCTGTGTGGAGTGTGAGCTCTCCTACCCTCCATGGCCTTGTAATCCCACTGTCCCCAGGCCAACTGTGCCTAGACTACACAGTAGTCTCATGTGCATGGAGCAGTCATGATCGATCCTGGTGGTAAC-GGGGGGTTGGTGTTTCAGGCATGGCACAGTCAGAGGAGGTCCCAAGGAGAGACTAAGAGGTAAATTTAAGTAGAGCTACACCCCATCCTTGGTATCTGTAGAACCCTGGATAAAATCAAATATacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103188208 494 - 106955855 ccaccacaccctgttaatattttgtatttttaagagagacagggtttcaccatgttggccaggctgatctcgaactcctgacctcaagtgatccacccatctcaatctcccgaagtgctgggattgcaggtgtgagccaccgcgcttgcccatgattatatgtttttttgttcttccttctgttgacatgaggtatcgtatctattgatttgagaatgttgaaataccctCCCTTCTGGTTGCTGCGTGGAGTGTGAGCTCTCCTACCCTCCATGGCCTTCTAATCCCACTGTCCCCAGGCCAACTGCTCCCAGACTGTGCAGTAGTCTCATGTGCATGGAGCAGTCGTGATCGATCCTGGTGGTGAC-GGGGGGTTGGTGTTTCAGGCATGACACAGTCAGAGGAGGTCCCAAGGAGAGACCAAGAGGTAAAGTTAAGTAGAGCTGCACCCCATCCTTGGCATCTGTAGAACCCTGGATAAAATCAAACATGcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60448917 492 + 64156825 ccaccgcacccggccaatattttgtatttttaagagag-cggggtttcaccatgttggccaggctggtctccaactcctgacctaaggtgacccactcgccgcagccccctaaagtgctgggattgcaggagtgagccactgaacctggccatgatcatgtg-ttttttgtcttcccttctgtcgacatgaagtaccatatctattgatttgagaatattgaaatatcctCCCTTCTGGCTGCTGTGTGGAGTGTGACCTCTCCTACCCTCCATGGCCTTCCAATCCCACTGTCCCCAGGCCAACTGCTCCCAGACTACACAGTAGTCTCTTGTGCATGGAGCAGCCACGATCGATCCTGGGGGTGAC-TGGTGGGTGGTGTTTCAGGCATGGCACACTCAGAGAAGCTCCCAAGGAGAGACAAAGAGGTAAATTTAAGTAGAGCTGTGCCCCATCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATATGcc i rheMac3.chr19 I 2877 C 0 s macFas5.chr19 55556035 492 + 59248254 ccaccgcacccggccAATAttttgtatttttaagagag-cggggtttcaccatgttggccaggctggtctccaactcctgacctaaggtgacccactcgccgcagccccctaaagtgctgggattgcaggagtgagccactgaacctggccatgatcatgtg-ttttttgtcttcccttctgtcgacatgaagtaccatatctattgatttgagaatattgaaatatcctCCCTTCTGGCTGCTGTGTGGAGTGTGACCTCTCCTACCCTCCATGGCCTTCCAATCCCACTGTCCCCAGGCCAACTGCTCCCAGACTACACAGTAGTCTCTTGTGCATGGAGCAGCCGCGATCGATCCTGGGGGTGAC-TGGTGGGTGGTGTTTCAGGCATGGCACACTCAGAGAAGCTCCCAAGGAGAGACAAAGAGGTAAATTTAAGTAGAGCTGTGCCCCATCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATATGcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47639148 492 + 51301725 ccaccgcgcctggccaatattttgtatttttaagagag-cggggtttcaccatgttggccaggctggtctccaactcctgccctAAGGTGACCCACTCGCCgcagccccctaaagtgctgggattgcaggagtgagccactgaacctggccatgatcatgtg-ttttttgtcttccCTTCTGTCGACATGAAGTACCATATCTATTGATTTGAGAATATTGAAATATCCTCccttctggctgctgtgtggagtgTGACCTCTCCTACCCTCCATGGCCTTCCAATCCCACTGTCCCCAGGCCAACTGCTCCCAGACTACACAGTAGTCTCTTGTGCATGGAGCAGCTGCAATCGATCCTGGTGGTGAC-TGGTGGGTGGTGTTTCAGGCATGGCACACTCAGAGAAGCTCCCAAGGAGAGACAAAGAGGTAAATTTAAGTAGAGCTGTGCCCCATCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATAtgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47319116 490 + 50890351 ccaccacgcccggccaatatttcatatttttgagagag-tggggtttcaccatgttggccaggctggtctccaactcctgacctaaggtgacccacgtgctgcagtcccctaaagtgctgggattgcaggcatgagccactgaacctggccgtgatcatatg-ttttttgtcttcccttctgtcgacatgaggtaccatatctattgatttgagaatattgaa--atcctCCCTTCTGGCTGCTGTGTGGAGTGTGACCTCTCCTACCCTCCATGGCCTTCCAATCCCACTGTCCCCAGGCCAACCGCTCCCAAACTACACAGTAGTCTCTTGTGCATGGAGCAGCTGCGATCGATCCTGGTGGTGAC-TGGCGGGTGGTGTTTCAGGCATGGCACACTCAGAGAAGGTCCCGAGGAGAGACCAAGAGGTAAACTTAAGTAGAGTTGCGCCCCATCCTTGGCATCTGTAGAACCCTGGATAAAATCAAATATGCC i chlSab2.chr6 I 1663 I 4664 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=198509.000000 s hg38.chr19_GL949753v2_alt 385483 84 + 796479 aacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccacaaaaaagg s panTro4.chr19 59578501 84 + 63644993 aacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccacaaaaaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56494865 84 + 60714840 aacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccacaaaaaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103188702 84 - 106955855 aacccaaatgcccatcattgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccacaaaaaagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60449409 84 + 64156825 aacccaaatgtccatcaatgatagactggataaagaaaatgtggcatatatatgccctggaatactatgcaaccataaaaaaag i rheMac3.chr19 C 0 I 6380 s macFas5.chr19 55556527 84 + 59248254 aacccaaatgtccatcaatgatagactggataaagaaaatgtggcatatatatgccctggaatactatgcaaccataaaaaaag i macFas5.chr19 C 0 I 6360 s papAnu2.chr19 47639640 84 + 51301725 aacccaaatgtccatcaatgatagactggataaagaaaatgtggcatatatatgccctggaatactatgcaaccataaaaaaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47324270 84 + 50890351 aacccaaatgcccatcaatgatagaatggataaagaaaaggtggcacatatacaccatggaatactatgcagccatgaaaacag i chlSab2.chr6 I 4664 I 2 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=22253.000000 s hg38.chr19_GL949753v2_alt 385567 9 + 796479 atgagttca s panTro4.chr19 59578585 9 + 63644993 atgagttca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56494949 9 + 60714840 aggagttca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103188786 9 - 106955855 atgagttca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60455873 9 + 64156825 atgagttca i rheMac3.chr19 I 6380 C 0 s macFas5.chr19 55562971 9 + 59248254 atgagttca i macFas5.chr19 I 6360 C 0 s papAnu2.chr19 47639724 9 + 51301725 atgagttca i papAnu2.chr19 C 0 I 1842 s chlSab2.chr6 47324356 9 + 50890351 atgagttca i chlSab2.chr6 I 2 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=1865688.000000 s hg38.chr19_GL949753v2_alt 385576 1079 + 796479 tgtcctttgcagggacacagatgaagctgaaaaccatcattctctgcaaactaacacgagaacagaaaaccaaacatcacgtgtcctcactcataggtgggagttgagcaatgagaacacatggacacgaagaggggaaaatcacacaccggcacctgtcacgggc-tggggggctgggggagggatagcattagaagaaatacctaatatagacaacaggttgatgggtgcagcaaaataccatggcacgtgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagaacttgaagtataataat-aaaaaaaaaGAAAACGAAACAATGAAACATGGGTTCTTATGAATCACAGAACACCCGTGACCCCAAGTTAAGATGGAAATTTATGATTCATTCCAACTAGGTCCTGTTTTCAGTATCTCACAAAAGCTTGACTCTAGAGTGAAATATACTTGGAAATGAATG-AACGACTCTTGTGGTCTTTTTACTTCTTGTAAGGCTTTAGGATCCACCCGTTTGAATACCTATGACCAGGACCTCCTGCAATGCTTCTCTCTCCACCTCCAGGCATCCCTTCATTCAGATAATACCAATTCATCATCACCATCTGACCTCTCCTTCAGCTTCTTCACCACCCTCCATCTCA-----------------ATTGCTT--TCTGTTTTTCTTCtttattttttgaacttcaacttttattttagatacgaggatacatgctcaggtttgctacatggaactattgcACCCAGGTGGTGAGTGCAGGACCCAGTGGGTATTTCTTTTATCCTGTCCTATTGCGTTAAATCTTTCCTTCCCGGGACTGGTCCTATCTCTAAACTTTTTGCGTAGTGATTTTATCAACTTAATTTTTGCTAGGATGCTAGATTTTCTAGGAGGGGAGGTAATTTGAAATGAAGTCTGGGTTACTGTGAATCCAGTATATCTGCTTTGCTCGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTCTTAAGTGAGGATGGATAAGATTTACTGAGTGGTGAGTGCACGAATACAAAAGCAAAATGAggcc s panTro4.chr19 59578594 1079 + 63644993 tgtcctttgcagggacacagatgaagctgaaaaccatcattctctgcaaactaacacaagaacagaaaaccaaacaccgcgtgtcctcactcataggtgggagttgagcaatgagaacacatggacacaaagagggggaaatcgcacactggcacctgtcatgggc-tggggggctgggggagggatagcattagaagaaatacctaatgtagacaacaggttgatgggtgcagcaaaataccatggcacgtgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagaacttgaagtataataat-aaaaaaaaaGAAAATGAAACAATGAAACATGGGTTCTTATGAATCACAGAACACCCGTGACCCCAAGTTAAGATGGAAATTTATGATTCACTCCAACTAAGTCCTGTTTTCAGTATCTCACAAAAGCTTGACTCTAGAGTGAAATATACTTGGAAATGAATG-AACGACTCTTGTGGTCTTTTTACTTCTTGTAAGGCATTAGGATCCACCCGTTTGAATACCTATGACCAGGACCTCCTGCAATGCTTCTCTCTCCGCCCCCAGGCATCCCTTCATTCAGATAATACCAATTCATCATCACCATCTGACCTCTCCTTCAGCTTCTTCACCACCCTCCATCTCA-----------------ATTGCTT--TCTCTTTTTCTTCtttattttttgaacttcaacttttattttagatatgaggatacatgctcaggtttgctacatagaactattgcacccaggtggtgagtgcaggacccagtgggtatttcttttatcctGTCCTATTGCGTTAAATCTTTCCTTCCCGGAACTGGTCCTATCTCTAAACTTTTTGCATAGTGATTTTATCAACTTAATTTTTGCTAGGATGCTAGATTTTCTAGGAGGGGAGGTAATTTGAAATGAAGTCTGTGTTACTGTGAATCCAATATATCTGCTTTGCTTGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTTTTAAGTGAGGATGGATAAGATTTACTGAGTGGTGAGTGCACGAATACAAAAGCAAAATGAggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56494958 1079 + 60714840 tgtcctttgcagggaaacagatgaagctgaaagccatcattctcagcaaactaacacgagaacagaaaaccaaacaccgcatgttctcactcataggtgggagttgagcaatgagaacacatggacacaaagagcggaaaatcacacaccggggcctgtcatgggc-tggggggctgggggagggatagcattagaagaaatacctaatgtagacaatgggttgatgggtgcagcaaaataccatggcacgtgtatacctatgtaagaaacctgcacgttctgcacatgtatcccagaacttgaagtataataat-aaaaaaaaaGAAAATGAAACAATGAAACATGGGTTCTTATGAATCACAGAACACCCGTGACCCCAAGTTAACATGGAAATTTATGATTCATTCCAACTAGGTCCTGTTTTCAGTATCTCACAAAAGCTTGACTCTAGAGTGAAATATACTTGGAAATGAATG-AAAGACTCTTGTGGTCTTTTTACTTCTTGTAAGGCGTTAGGATCCACGCGTTTGAATACCTTTGACCAGGACCTCCTGCAATGCTTCTCTCTCTGCCCCCAGGCGTCCCTTCATTCAGATAATACCAACTCATCATCACCATCTGACCTCTGCTTCAGCTTCTTCACCACCCTCCATCTCA-----------------ATTGCTT--TCTCTTTTTCTTCtttattttttgaacttcaacttttattttagatatggggatacatgctcaggtttactacatggaactattgcACCCAGGTGGTGAGTGCAGGACCCAGTGGATATTTCTTTTATCCTGTCCTATTGTGTTAAATCTTTCCTTCCCGGGACTGGTCCTATCTCTAAACTTTTTGCGTAGTGATTTTATCAACTTAGTTTTTGCTAGGATGCTAGATTTTCCAGGAGGGGAGGTAATTTGAAATGAAGTCTGGGTTACTGTGAATCCAATATATCTACTTTGCTCGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTCTTAAGTGAGGATGGATAAGATTTACTGAGTGGTGAGTGCACAAATACAAAAGCAAAATGAggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103188795 1095 - 106955855 tgtcctttgcagggacacggatgaagctgaaaaccatcattcttagcaaactaacacgagaacagaaaaccaaacaccgcatgttctcactcataggtgggagttgagcaaagagaacacatggacacaaagaagggaaagtcacacac-ggggcctgtcacgggc-tggggggctgggggagggactgcattagaagaaatacctaatgtagacaacgggttgatgggtgcagcaaaacaccatggcacgtgtacacctatgtaacaaacctgcacgttctgcacatgtatcccagaacttgaagtataataat--aaaaaaaagaAAAAGAAACAATGAAACATGGGTTCTTATGAATCACAGAACACCCGTGACCCCAAGTTGAGATGGAAATTTATGATTCATTCCAACTAGGTCCTGTTTTCAGTATCTCACAAAAGCTTGACTCTAGAGTGAAATATACTTGGAAATGAATG-AAAGACTCTTGTGGTCTTTTTACTTCTTGTAAGGCGTTAGGAGCCATGCGTTTGAATACCTTTGACCAGGACCACCTGCAATGCTTCTCTCTCCACCCCCAGGCGTCCCTTCATTCAGATAATACCAACGCATCATCACCATCTGACCTCTCCTTCAGCTTCTTCACCACCCTCCATCTCAAAGCCACAGAATACGTTATTGCTT--TCTCTTTTTCTTCTTTAGTTTTTGAACttccacttttattttagatatggggatacatgctcaggtttgctacatggaactactgcACCCAGGTGGTGAGTGCAGGACCTAGTGGGTATTTCTTTTATCCTGTCCTATTGTGTTAGATCTTTCCTTCCCGGGACTGGTCCTATCTCTAAACTTTTTGCGTAGTGATTTTATCAACTTAGTTTTTGCTAGGATGCTAGATTTCCCAGGAGCGGAAGTAATTTGAAATGAAGTCTGGGTTAC-GTGAATCCAATATATCTGCTTTGCTTGCCTTTTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTCTTAAGTGAGGATGGATAAGACTTACGGAATGGTGAGCACACGAATACAAAAGCAAAATGAggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60455882 1097 + 64156825 tgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaacggaaaaccaaagacagcatgttctcactaatatgtgggagttgaatcatgagaacacatggacacaaggaggggaacatcacacactggggcctgtcacgggg-tgggggtctaggagagcgatagcattaggagaaatacctaatgtacatgatgggttgatggttgcaacaaaccaccgtggcacgtgtgtgcctctgtaacaaacctgcacattctacacatgtatcccagaacttgaagtataatcat-aaaaaaaaaGAAAATGAAACAATAAAACATGAGTTCTTATGAATCACAGAACACCCGTGCCCCCAAATTAAGTTGGAAATTTATGATTCATTCCAATTAGGTC--GTTTTTAGTATCTCACAAAAGTTTGATTCTACAGTGAAACATACTTTGAAAAGAATGAAAAGATTCTTGTGGTCTTTTTACTTCTTGTAAGGCGTTAGGATCCACCCGTTTGAATACCTTTGCCCAGGACCACCTGTAATGCTTCTCTTTCCACCCCCAGGCATCCCTTCATTCAGATAATGCCAACTCATCATCACCATCTGACCTCTCATTCAGCTTCCTCACCACCCTCCATCTCAAATCCACAAAATATGTTATTGCTTTCTCTCTTTTTTTTCtttattttttggacttcaacttttattttagatatgggcgtacatgctcaggtttgctacatgggactattgcACCCAGGAGGTGAGTGCAGTACCCAGTGAGTATTTCTTTCATCCTGTCCTATTGCTTTAAATCTTTCCTTCCCGGGACTGGTCCTATTTCTAAACTTTTTGTGTAGTGATTTTATCAACTTAGTTTTTGCTAGGATGCTAGATTTTCCAGAAGGGGAGGTAACTGGAAATGAAGTCTGGGTTACTGTGAATCCAATATATCTGCTTTGCTCGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTCTTAAGTAAGGATGGATAAGATTTACTGAACGGTGAGTGCATGACTACAAAAACAAAATGAGGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55562980 1098 + 59248254 tgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaacggaaaaccaaagacagcatgttctcactaatatgtgggagttgaatcatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagggggttgggggtctaggagagcgatagcattaggagaaatacctaatgtacatgatgggttgatggttgcaacaaaccaccatggcacgtgtgtgcctctgtaacaaacctgcacattctacacatgtatcccagaacttgaagtataatcat-aaaaaaaaaGAAAATGAAACAATAAAACATGAGTTCTTATGAATCACAGAACACCCGTGCCCCCAAATTAAGTTGGAAATTTATGATTCATTCCAATTAGGTC--GTTTTTAGTATCTCACAAAAGTTTGATTCTACAGTGAAACATACTTTGAAAAGAATGAAAAGATTCTTGTGGTCTTTTTACTTCTTATAAGGCGTTAGGATCCACCCGTTTGAATACCTTTGCCCAGGACCACCTGTAATGCTTCTCTTTCCACCCCCAGGCATCCCTTCATTCAGATAATGCCAACTCATCATCACCATCTGACCTCTCATTCAGCTTCCTCACCACCTTCCATCTCAAATCCACAAAATATGTTATTGCTTTCTCTCTTTTTTTTCtttattttttgaacttcaacttttattttagatatgggcgtacatgctcaggtttgctacatgggactattgcACCCAGGAGGTGAGTGCAGTACCCAGTGAGTATTTCTTTCATCCTGTCCTATTGCTTTAAATCTTTCCTTCCCGGGACTGGTCCTATTTCTAAACTTTTTGTGTAGTGATTTTATCAACTTAGTTTTTGCTAGGATGCTAGATTTTCCAGAAGGGGAGGTAACTGGAAATGAAGTCTGGGTTACTGTGAATCCAATATATCTGCTTTGCTCGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGGTTGACATGTTTAAATGTTTCTTAAGTAAGGATGGATAAGATTTACTGAACGGTGAGTGCATGACTACAAAAACAAAATGAggct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47324365 1096 + 50890351 tgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaagacggcatgttctcactaatatgtgggagctgaa-catgagaacacatggacacagggaggggaacatcacacactggggcctgtcagggagttgggggtctaggagagggatagcattaggagaaatacctaatgtacatgatgggttgatgggtgcaacaaaccaccgtggcacgtgtgtgcctctgtaacaaacctgcacattctacacatgtatcccagaacttgaagcataatcataaaaaaaaaaGAAAATGAAACAATAAAACATGAGTTCTTATGAATCACAGAACACCCGTGCCCCCAAATTAAGTTGGAAATTTATGATTCATTCCAATTAGGTC--GTTTTTAGTATCTCACAAAAGTTTGATTCTACAGTGAAACATACTTTGAAAAGAATGAAAAGATTCTTGTGGTCTTTTTACTTCTTGTAAGGCGTTAGGATCCACTCGTTTGAATACCTTTGCCCAGGACCACCTGCAATGCTTCCCTTTCCACCCCCAGGCATCCCTTCATTCAGATAATGCCAACTCATCATCACCTTCTTACCTCTCATTCAGCTTCCTCACCACCCTCCATCTCAAATCCACAAAATATGTTATTGCTT--TCTCTTTTTTTTCtttattttttgaacttcgacttttattttagatatggggatatatgctcaggtttgctacatgagactattgcACCCAGGAGGTGAGTGCAGTACCCAGTGAGTATTTCTTTCATCCTATCCTATTGCTTTAAATCTTTCCTTCCCGGGACTGGTCCTATTTCTAAACTTTTTGTGTACTGATTTTATCAACTTAGTTTTTGCTAGGATGCTAGATTTTCCAGGAGGGGAGGTAACTGGAAATGAAGTCTGGGTTACTGTGAATCCAATATATCTGCTTTGCTCGCC--TTTATCTCTTGTGTCCTGGGATGGCCACAGATTGACATGTTTAAATGTTTCTTAAGTGAGGATGGATAAGATTTACTGAACGGTGAGTACATGACTACAAAAACAAAATGAggct i chlSab2.chr6 C 0 I 135 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=59481.000000 s hg38.chr19_GL949753v2_alt 386655 37 + 796479 gggcgcggtggctcacgcctgtaatcccagcactttg s panTro4.chr19 59579673 37 + 63644993 gggcgcggtggctcacgcctgtaatcccagcactttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496037 37 + 60714840 gagcgcagtggctcacgcctgtaatcccagcactttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103189890 37 - 106955855 gggcatggtggctcacgcctgtaatcccagcactttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60456979 37 + 64156825 GGGTGATGAGGCCGATGCCTGTAATCCCAGCACTTTG i rheMac3.chr19 C 0 M 8813 s macFas5.chr19 55564078 37 + 59248254 gggtgatgaggccgatgcctgtaatcccagcactttg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47325596 37 + 50890351 gggcgtggtggctcatgcctgtaatcccagcactttg i chlSab2.chr6 I 135 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=160581.000000 s hg38.chr19_GL949753v2_alt 386692 132 + 796479 ggaggccaaggcgggcagatcacctgaggtcaggagttcgaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaagttagccgggtgtggtggcagctgcctgtaatctcagctct s panTro4.chr19 59579710 132 + 63644993 ggaggccaaggcgggcagatcacctgaggtcaggagttcgaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcagctgcctataatctcagctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496074 132 + 60714840 ggaggccaaggcgagcaggtcacctgaggtcaggagttcgaaaccagcctggccaacatggtgaaaccccatttttactaaaaatacaaaaattagcgaagtgtggtggcagctgcctgtaatttcagctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103189927 132 - 106955855 ggaggccaaggcgggcagatcacctgaggtcaggagttcaaaaccagcctgtctaacatggtgaaaccccatctctactaaaaatacaaaaattagtctggtgtggtgccagctgcctgtaatctcagctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55564115 132 + 59248254 ggacgccaaggcgggcagatcacctgaggttaggagttcaaaaccagcctggctaatatggtgaaaccccatctctactaaaaatacaaaaattagctgagcgtggtggctcatgcctgtaatcccagcact i macFas5.chr19 C 0 I 133 s chlSab2.chr6 47325633 130 + 50890351 ggagggcaaggcgggcagatcacctgaggtcaggagttcaaaaccagcctggataacatggtgaaaccccatctctactaaaaatacaaaaatgagcctggtgtggtggcagctgcctgtaatctcagct-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I e rheMac3.chr19 60457016 8813 + 64156825 M a score=2217.000000 s hg38.chr19_GL949753v2_alt 386824 5 + 796479 cagct s panTro4.chr19 59579842 5 + 63644993 cagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496206 5 + 60714840 caggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103190059 5 - 106955855 cagct i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e chlSab2.chr6 47325763 0 + 50890351 C e papAnu2.chr19 47639733 1842 + 51301725 I e macFas5.chr19 55564247 133 + 59248254 I e rheMac3.chr19 60457016 8813 + 64156825 M a score=126160.000000 s hg38.chr19_GL949753v2_alt 386829 111 + 796479 actcgggaggctgagttaggagaattgtttgaacccaggaggctgaggttgcagtaagccaagattgcaccactgcactccagcctggatgacagagtgtcaccctgtc----ac s panTro4.chr19 59579847 111 + 63644993 actcgggaggctgagttaggagaattgcttgaacccaggaggccgaggttgcagtaagccaagattgcaccactgcactccagcctggatgacagagtgtcaccttgtc----ac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496211 114 + 60714840 actcaggagg-tgagttaggagaattgcttgaacccaggaggccgaggttgcagtgagccaagactggaccactgcactccagcctgagtgacagagagtgaccctgtccaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103190064 111 - 106955855 actcgggaggctgagttaggagaactgcttgaacccaggaggccgaggttgcagtgagccaagattgcaccactgcactccagcctgggtgacagagtgtgaccctgtc----ac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55564380 111 + 59248254 actcgggaggctgaggcaggagaagtgtttgaacccaggaagctgaggttgcagtgagtggagattgcgccactgcactctagcctgggtgacagagcgtgatcctgtc----tc i macFas5.chr19 I 133 I 3 s chlSab2.chr6 47325763 111 + 50890351 actcgggaggatgaggcaggagaagtgcttgaaccctggaggctgaggttgcagtgagcggagattgcgccaccgcactctagcctgggtgacagagcgtgatcctgtc----tc i chlSab2.chr6 C 0 I 8 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I e rheMac3.chr19 60457016 8813 + 64156825 M a score=12384.000000 s hg38.chr19_GL949753v2_alt 386940 8 + 796479 aaaaaaaa s panTro4.chr19 59579958 4 + 63644993 ----aaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496325 8 + 60714840 aaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103190175 8 - 106955855 aaaaaaaa i nomLeu3.chr10 C 0 I 956 s rheMac3.chr19 60465832 8 + 64156825 aaaaaaaa i rheMac3.chr19 M 8813 C 0 s macFas5.chr19 55564494 8 + 59248254 aaaaaaaa i macFas5.chr19 I 3 C 0 s chlSab2.chr6 47325882 8 + 50890351 aaaaaaaa i chlSab2.chr6 I 8 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=1214495.000000 s hg38.chr19_GL949753v2_alt 386948 749 + 796479 aaaaaa-------aaaaaaagaagcaaaaTAC---AAGAAGTCCAGGACTGGTAAAGGCAAGGCATGTTGAGCGGTTAGAAAAGGGGTGATGACATCGAAAAACCTCCTGGCAT--TTCCCAGTCCTTGCCTAGCACAggttactctgaaagcaggacttaagacaaggatatgagcgcaggtaactgatttgggaaccaagtttaagggaatagggttcccttatgaaagagagaaggagaggaatttctgaaatcagcatgcattgcggacaccactacagcaggtaatatggacaggtccacaccaggatctctgataatgtgcagaccatcatccagaacttcccgccaaaacaggagATACTCGCCAATATGTGTATGGCTTTCTAGCCCCCATTTCTGGGAGTTTCTTTTTCCCCAGCCACTGTCAGACGCATCAAGCTTTGGCTGAAATAGCTTCCAATAAGGTCCTTACACACAAATGTGGAGAGACACATGGAAATCCTCGAAATG----AGATACTGT-CCCGTGATTCTGAGAGTGACCCAAAAGGATACGGAATGAGGTACTAAAAGCAGGTGCTTGGAAACCTGAGGGCAGTGGTGTTCATGCGTTTCCCGGCACTTTGACTTTCAGCCTCCTGCAAGCC------TCTCCTTCTTTGCCTTCCTGACCGTTAGATACGATTAATTTGGGGTTTGTTTT---TTCTGCTTCCTCTTTCCCCTCCCACCCTATGTTTCAGTTCTAAAGTTAGAAGGTCCTCTC s panTro4.chr19 59579962 749 + 63644993 aaaaaa-------aaaaaaagaagcaaaaTAC---AAGAAGTCCAGGACTGGTAAAGGCAAGGCATGTTGAGCGGTTAGAAAAGGGGTGATGACATCGAAAAACCTCCTGGCAT--TTTCCAGTCCTTGcctagcacaggttactctgaaagcaggacttaagacaaggatatgagtgcaggtaactgatttgggaaccaagtttaagggaataggGTTCCCTTATGAAAGAGAGAAGGAAAGGAATTTCTGAAATCGGCATGCATCGCGGACACCACTACAGCAGGTAATATGGACAGGTCCACACCAGGATCTCTGATAATGTGCAGATCACCATCCAGAACTTCCCGCCAAAACAGGAGATACTCGCCAATATGTGTATGGCTTTCTAGTCCCCATTTCTGGGAGTTTCTTTTTCCCCAGCGACTGTCAGACGCATCAAGCTTTGGCTGAAATAGCTTCCAATAAGGTCCTTACACACAAATGTGGAGAGACACATGGAAATCCTCGAAATG----AGATACTGT-CCTGTGATTCTGAGAGTGACCCAAAAGGATACAGAATGAGGTACTAAAAGCAGGTGCTTGGAAACCTGAAGGCAGTGGTGTTCATGCGTTTCCCGGCACTTTGACTTTCAGCCTCCCGCAAGCC------TCTCCTTCTTTGCCTTCCTGACCATTAGATACGATTAATTTGGGGTTTGTTTT---TTCTGCTTCCTCTTTCCCCTCCCACCCTATGTTTCAGTTCTAAAGTTAGAAGGTCCTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56496333 750 + 60714840 aaaaaa-------aaaaaaGGAAGCAAAATAC---AAGAAGTCCAGGACTGGTAAAGGCAAGGCATGTTGAGCGGTTAGAAAAGGGGTGATGACATCAAAAAACCTCCTGGCAT--TTCCCAGTCCTTGCCTAGCACAggttactctgaaagcaggacttaagacaaggatatgagcacaggtgactgatttgggaACCAAGTTTAAGGGAATAGGGTTCCCTTATGAAAGAGAGAAGGAAAGGAATTTCTGAAATCAGCAGGCATCGTGGACACCACTACAGCAGGTAATATGGACAGGTCCACACCAGGATATCTGATAAAGTGCAGACCACCATCCAGAACTTCCCTCCAAAACAGGAGATACTTGCCAATATGTGTATGGCTTTCTAGTCTCCATTTCTGGGAGTTTCTTTTTCCCCAGCGACTGTCAGACGCATCAAGCTTTGGCTGAAATAGCTTCCAGTAAGGTCCTTACACACAAATGTGGAGAGACACATGGAAATCCTCGAAATGAGATAGATACTGT-CCTGTGATTCTGAGAGTGACCCAAAAGGATACGGAATGAGGTACTAAAAGCAGGTGCTTGGAAACCTGAAGGCAGTGGTGTTCATGCGTTTCCCGGCACTTTGACTTTCAGCCT---GCAAGCC------TCTCCTTCTTTGCCTTCCTGAACATTAGACACGATTTATTTTGGGTTTGTTTT---TTCTGCTTCCTTTTTCCCCTCCCACCCTATGTTTCAGTTCTAAAATTAGAAGGTCCTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103191139 717 - 106955855 acgaag-------aagaagaagaGCAAAATAC---AAGAAGTCCAGGACTGGTAAAGGCAAGGCATGTTGAGCGGTTAGAAAAGGGGTGATGACATCGAAAAACCTCCTGGCA---TTCCCAGTCCTTGCCTAGCAC-------------AGCAGGACTTAAGACAAAGATATGAGCACAGGTAACTGATTTGGGAACCAAGTTTAAGAGAATAGGGCTCCCTTATGAAAGAGAGAAGGAAAGGAATTTCTGAAATCAGCATGCATCACGGACACCACTACAGCAGGTAATATGGACAGGTCCACACCAGGATCTCAGATAGTGTGCAGACCACCGTCCAGAACTGCCCTCCAAAACAGGAGATACTCGCCAATATGTGTATGGCTTTCTACTCCCCATTTCTGGGAGTTTCTTTCTCCCCAGCAACTGTCAGACGCATCAAGCTTTGGCTGAAATAGCTTCCAGTAAGGTCCTTACACACAAATGTGGAGAGACACATGGAAATCCTCGAAATG----AGATACTGTCCCCGTGATTCTGAGAGTGACCCAAAAGGATATGGAATGAGATACTAAAAGCAGGTGCTTGGAAACCTGAAGGCAGTGGTGTTCATGTGTTTCC---------------CAGCCTCCTGCAAGC--------CTCCTTCTTTGCCTTCCTGACCATTAGACACGATTTATTTTGGGTTTGTTTT---TTCTGCTTCCTCTTTCCCCTCCCACCC--TGTTTCAGTTCTAAAATTAGAAGGTCCTCTC i nomLeu3.chr10 I 956 C 0 s rheMac3.chr19 60465840 748 + 64156825 aaaaaa-------aaaaaaaGCAGGAAAATAC---AAGAAGTCCAGGACTGGT-ACGGCAAGTCATGTTGAGCGGTTAGAAAAGGGGTGAGGACATTGAAAAACTTCCTGGCATAGTTCTCAGTCCTTGCCTAGCACAGGTTACTCTGAAAGCAGGACTTAAG-----GATATGAACGCAGGTAACTGATTTGGGTACCAGGGTTAAGGGAATAGGG-----TAGAGAAAGAGAGAAGGGAAGGAATTTCTGAAATCAGCACGCATCGCGGACACCACTGCAGCAGGTAACAAGGACAGGTCCACACCAGGGTCTCTGATAGT-TGCAGACCACGGTCCAGAACTTCCCTCCAAAACAGGAGACACTCGGCAATATGTATATGACTTTCTAGTCCCCATTTCTGGGAGTTTGTTTTTCCCCAGAGATTGTCCGATGCATCAGGCTTTGGCTGAAATAGCTTCCGATCAGCTCCTTACACACCAGTGTGGAGACACACATGGAAATCCTCGAAATG----AGATACTGC-CGCGTGATTCTGAGGGTGACCCCAAAGGATACGGAATGAGGTACTAAACGCAGGTGCTTGGAAACCTGAATGCAGCGGTATTCATGCAGTTCCCGGCACTTTGACTTTCAGCTTCCTGTAAGCCTCTCCTTCTCCTTCTTTGCCTTCCTGACCATTAGACATGATTTATTTTGGGTTTGTTTTAACCTCTACTTCCTCTTTCCCCTCCCACCCTATGTTTCAGTTCTAAAATTAGAAGGTCCTCTC i rheMac3.chr19 C 0 I 318 s macFas5.chr19 55564502 749 + 59248254 aaaaaa-------aaaaaaaGCAGCAAAATAC---AAGAAGTCCAGGACTGGTAACGGCAAGTCATGTTGAGCGGTTAGAAAAGGGGTGAGGACATCGAAAAACTTCCTGGCATAGTTCTCAGTCCTTGCCTAGCACAGGTTACTCTGAAAGCAGGACTTAAG-----GATATGAACGCAGGTAACTGATTTGGGTACCAGGGTTAAGGGAATAGGG-----TAGAGAAAGAGAGAAGGGAAGGAATTTCTGAAATCAGCACGCATCGCGGACACCACTGCAGCAGGTAACAAGGACAGGTCCACACCAGGGTCTCTGATAGT-TGCAGACCACGATCCAGAACTTCCCTCCAAAACAGGAGACACTCGGCAATATGTATATGACTTTCTAGTCCCCATTTCTGGGAGTTTGTTTTTCCCCAGAGATTGTCCGATGCATCAGGCTTTGGCTGAAATAGCTTCCGATCAGCTCCTTACACACCAGTGTGGAGACACACATGGAAATCCTCGAAATG----AGATACTGC-CCCGTGATTCTGAGGGTGACCCCAAAGGATACGGAATGAGGTACTAAACGCAGGTGCTTGGAAACCTGAATGCAGCGGTATTCATGCAGTTCCCGGCACTTTGACTTTCAGCCTCCTGTAAGCCTCTCCTTCTCCTTCTTTGCCTTCCTGACCATTAGACATGATTTATTTTGGGTTTGTTTTAACCTCTACTTCCCCTTTCCCCTCCCACCCTATGTTTCAGTTCTAAAATTAGAAGGTCCTCTC i macFas5.chr19 C 0 I 320 s chlSab2.chr6 47325890 750 + 50890351 aaaaaaGGAAGAGAAAAAAAGCAGCAAAATACAAGAAGAAGTCCAGGACTGGTAAAGGCAAGTCATGTTGAGCGGTTAGAAAAGGGGTGAGGACATCGAAAAACTTCCTGGCATAGTTCCCACTCCTTCTCTAGCACAGGTTACTCTGAAAGCAGGACTTAAG-----GATATGAGCGCAGGTAACTGATTTGGGTACCAGGGTTAAGGGAACAGGA-----TAGAGAAAGAGAGAAGGGAAGGGATTTCTGAGATCAGCACGCCTTGCGGACA-CACTGCAGCAGGTAACAAGGACAGGTGCACACCAGGATCTCTGATAGT-TGCAGACCACGATCCAGAACTTCCCTCCAAAGCAGGAGATACTCGGCACTATGTGTATGACTTTCTAGTCCCCATTTCTGGGAGTTTGTTTTTCCCCAGAGATTGTCCGATGCATCAGGCTTTGGCTGAAATAGCTTCCCGTCAGCTCCTTACACACCAGTGTGGAGACACGCATGGAAATCCTCGAAATG----AGATACTGC-CCCGTGATTCTGA--GTGACCCCAAAGGATACGGAATGAGGTACTAAAAGCAGGTGCTTGGAAACCTGAATGCAGCGATATTCACGCAGTTCCCGGCACTTGTACTTTCAGCCTCTTGCAAGCC------TCTCCTTCTTTGCCTTCCTGACCATTAGACATGATTTATTTTGGGTTTGTTTTAACCTCTACTTCCTCCTTCCCCTCCCACCCTATGTTTCAGTTCTAAAATTAGAAGGTCCTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=5922.000000 s hg38.chr19_GL949753v2_alt 387697 3 + 796479 ATC s panTro4.chr19 59580711 3 + 63644993 ATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56497083 3 + 60714840 ATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103191856 3 - 106955855 ATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60466906 3 + 64156825 ATC i rheMac3.chr19 I 318 C 0 s macFas5.chr19 55565571 3 + 59248254 ATC i macFas5.chr19 I 320 C 0 s chlSab2.chr6 47326640 3 + 50890351 ATC i chlSab2.chr6 C 0 I 315 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=1514017.000000 s hg38.chr19_GL949753v2_alt 387700 888 + 796479 CTTTTAAGAAGAACAGAGACAGAAAATGGTTAGTCACCATCTAGGACAGACTACAATTCCAGATCATTGCAGGACGTGCCCACTCAAATGGATGATTATTGAGAGCTGGCCACCTGAAGTGTTTT------------------------------ACA------------------------------CAGGCAGTGATCTAAGGGTTGAAGCTATCTGGCCTTTTTGCTTGCTTGTTATGTATTTATGGCTTTTTTCCTTTTCAAAATAATTTTACTAAatatttaattcaccaactatatatatttatggggtacaatgtgttataaatgtatacactgtggaatgatggaatcaagacagttaacatgtccatcactccgcatactaacatct-------gtgaaaacatttaaaatctatgctTggctgggcgtggtggctcatgcctgtaaccccagcaactttgagaggctgagatgggcggatcaccagaggtcaggagtttgagaccggcctggccaacatggtgaaaccccatctctattaaaaatacaaaaattagctgtgagtggtggcgggtgcctgtaatcccagctacacaggaggctaaagcaggagagtctcctgaacccaggaggcggaggttgcagtgagctgagatcacaccacagcactctagcctgggcgacagagtgagactgcatctcagaaaagaaaa--aaTATATATATATattttggagctacatcgtgctagcgctgcagagaatgagttttgttttgcgacacagtttttagatgtctaccgggctctggtggagatggaatgtttggcctcaagtgggca-ggtcccatgggacatgagtagccgaccatgacctggctgcgtactggcccaccaggcattcgactggcgtgcccagccgctctccgtcatcgcagagaagtgctcta s panTro4.chr19 59580714 917 + 63644993 CTTTTAAGAAGAACAGAGACAGAAAATGGTTAGTCACCATCTAGGACAGACTACAATTCCAGATCATTGCAGGACGTGCCCACTCAAATGGATGATTATTGAGAGCTGGCCACCTGAAGTGTTTTACACAGGTAGCTGTCTAAGGGTTGAAGCTAACA------------------------------CAGGCAGTGATCTAAGGGTTGAAGCTATCTGGCCTTTTTGCTTGCTTGTTATGTATTTATGGCTTTTTTCCTTTTCAAAATAATTTTACTAAatatttaattcaccaactatatatatttatggggtacaatgtgttataaatgtatacactgtggaatgatggaatcaagacaattaacatgtccatcactccacatactaacatct-------gtgaaaacatttaaaatctaTGCTTggctgggcgtggtggctcatgcctgtaatcccagcaactttgagaggctgagatgggcggatcacctgaggtcaggagtttgagaccggcctggccaacatggtgaaaccccatctctgttaaaaatacaaaaattagctctgagtggtggcgggtgcctgtaatcccagctacacaggaggctagagcaggagagtctcctgaacccaggaggcagaggttgcggtgagctgagatcacaccacaacactctagcctgggcgacagagcgagacttcgtctcagaaaagaaaa--aa-aTATATACATattttggagctacatcgtgctagcgctgcagagaatgcgttttgttttgcgacacagtttttaggtgtctaccgggctctggtggagatggaatgtttggcctcaagtgggca-ggtcccatgggacatgagcagccgaccatgacctggctgcgtactggcccaccaagcattcgactggcatgcccagccgctctccgtcatcgcagagaagtgctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56497086 916 + 60714840 CTTTTAAGAAGAACAGAGACAGAAAATGATTAGTCACCACACAGGACAGA-TACAATTCCAGATCATTGCAGGACGTGCCCACTCCAATGGATGATTATTGAGAGCTGGCCACCTGAGGTGTTTTACACAGGTAGCGGTCTAAGGGTTGAAGCTAACA------------------------------CAGACAGTGGTCTAAGGGTTGAAGCTATCTGGCCTTTTTGCTTGCTTGTTATGTATTTATGGCCTTTTTCCTTTTCGAAATAATTTTACTAAatatttaattcaccaactatatatatctatggggtacaatgtgctataaatgtatacactgtggaatgatggaatcaagccaattaacatttccatcactccgtgtactaacatcc-------gtgaaaacatttaaaatctaTGCTTggctgggcatggtggctcatgcctgtaatcccagcaactttgagaggctgagataggtggatcacctgaggtcaggagttcgagaccggcctggccaacatggtgaaaccccatctctattaaaaatacaaaaattagctgggagtggaggtgggtgcctgtaatcccagctacacaggaggctaaagcaggagagtcgcctgaacccaggaggcggaggttgcagtgagctgagatcacaccacagctctctagcctgggcgacagaccgagattttgtctcagaaaagaaaa--a--aTATATATATattttggagctacatcgtgctagcgctgcagagaatgagttttgttttgcgacacagtttttaggtgtctactgggctctggtagagatggaatgtttggcctcaagtaggcagggtcccatgggacatcagtagccgaccatgacctggctgtgtactgacccaccaagcattcaactggcgtgcccagccgctctccgtcatctcatagaagtgcttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103191859 883 - 106955855 CTTTTAAGAAGAACAGAGACAGAAAATGATTAGTCACCATCTAGGATAGACTACAATTCCAGATCATTGCAGG--------------------------TGAGAGCTGGCCACCTGAGGTGTTTTACACAGGTAGCGGTCTAAGGGTT-AAGCTAACA------------------------------CAGGCAGCGGTCTAAGGGTTGAAGCTATCTGGCCTTTTTGCTTGCTTGTTATGTATTTATGGCTTTTTTCCTTTTCAAAATAATTTTACTAAatatttaattcaccaactatatatatttatggggtacaatgtgttgtaaacgtatacactgtggaatgatggaatcaaaccaattaacatgtccatcactccacgtactaacatct-------gtgaaaacatttaaaatctaTGCTTggctgggcgtggtggctcatgcctgtaatcccagcaactttgagaggccgaggcgggagggtcacctgaggtcaggagttcgagactggcctggccaacatggtgaaaccccatctctatt--------aaaaattagctgggagtggtggcaggtgcctgtaatcctagctacataggaggctaaagcaggagagtcgcctgaacccaggaggcggaggttgcagtgagctgagatcacgccacagcactctagcctgggtgacagagcgagacttcgtctcagaaaagaaaa--aa-aTATATATATattttggagctacctcgtgctagcgctgcagagaatgagttttgttttgtgacacagtttttagatgtctactgggctctggtagagatggaatgtttggcctcaagtaggcagagtcccatgggacatcggtagccaaccatgacctggctgagcactgacccaccaagcatttaactggcgtgcccagccgctctccatcatcatatagaagtgctttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60466909 926 + 64156825 CTTTTAAGGAGATCAGAGGCAGAAAATGATTAGTCACCATCTAGGACAGACCACAATTCCAGATCATTGCAGGACATGCCCATTCGAATGGATGATTATTGAGAGCTGACCACCTGCAGTGTTTTACACAGGCAGCGGCCTGAGGGTGGAAGCTAACG------------------------------CAGGCAGTGGTCTGAGGGTTGAAGCTATCTGGCCTTTATGCGTGCTTGTTATCTATTTATGGTTA-TTTTCTTTTCAAAATAATTTTACTAAATATTGAATTCACCaactatatatatttatggagtacaatgtgttataaatgtatacattgcggaatgatggaatcaagccaattaacatgtccatcactccacatactaacatctatctgcagtgaagacatttaaaatctacgctTggctgggcgcggcggctcacgcctataatcccagcaactttgggatgcccaggcgggtggatcaactgaggtcaggagttcgagaccagcctggcaaacatggtgaaaccccatctctattaaaaacacaaaaattagccaggagtggtggtgggtgcctgcaatcccagccacacaggaggctaaagcaggagagtcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccactgcactctagcctgggtgacagagcaagacttcgtctcagaaaagaaagaaaa-aaaaaaaaagattttggagctacatcgtgctggcgctgaagagaatgagttttgttttgcggcacagtttttaggtggctactgggctctggtagagatggaacgtttggcctcacgtaggcagggccccgtgggacatcagtagccaaccatgacctggctgcgcactggcccaccaagcgttcaactggcatgcccagccgctctccgtcatcacagagaagtggtttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55565574 926 + 59248254 CTTTTAAGGAGATCAGAGGCAGAAAATGATTAGTCACCATCTAGGACAGACCACAATTCCAGATCATTGCAGGACATGCCCATTCGAATGGATGATTATTGAGAGCTGACCACCGGCAGTGTTTTACACAGGCAGCGGCCTGAGGGTGGAAGCTAACG------------------------------CAGGCAGTGGTCTGAGGGTTGAAGCTATCTGGCCTTTTTGCGTGCTTGTTATCTATTTATGGTTA-TTTTCTTTTCAAAATAATTTTACTAAATATTGAATTCACCaactatatatatttatggagtacaatgtgttataaatgtatacattgcggaatgatggaatcaagccaattaacatgtccatcactccacatactaacatctatctgcagtgaagacatttaaaatctatgcttggctgggcgcggcggctcacgcctataatcccagcaactttgggaggcccaggcgggtggatcaactgaggtcaggagttcgagaccagcctggcaaacatggtgaaaccccatctctattaaaaacacaaaaattagccaggagtggtggtgggtgcctgcaatcccagccacacaggaggctaaagcaggagagtcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccactgcactctagcctgggtgacagagcaagacttcgtctcagaaaagaaagaaaa-aaaaaaaaaGATTTTGGAGCTACATCGTGCTGGCGctgaagagaatgagttttgttttgcggcacagtttttaggtggctactgggctctggtagagatggaacgtttggcctcacgtaggcagggccccgtgggacatcagtagccaaccatgacctggctgcgcactggcccaccaagcgttcaactggcatgcccagccgctctccatcatcacagagaagtggtttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47326958 955 + 50890351 CTTTTAAGGAGATCAGAGGCAGAAAATGATTAGTCACCATCTAGGACAGACCACAATTCCAGATCATTGCAGGACATGCCCATTCGAATGGATGATTATTGAGAGCTGACCACCTGCAGTGTTTTACACAGGCAGCGGCCTGAGGGTGGAAGTTAATGCAGGCAGTGGTCTGAGGGTTGAAGCTAATCCAGGCAGTGGTCTGAGGGTTGAAGCTATCTGGCCTTTTTGCATGCTTGTTATCTATTTATGGTTATTTTTCTTTTCAAAATAATTTTACTAAATATTGAATTCACCaactatatgtatttatggagtacaatgtgttataaatgtatacattgcggaatgatggaatcaagccaattaacatgtccatcactccacatactaacatctatctgcagtgaagacatttaaaatctGTGCTTggcctggcgcggtggctcatgcctgtcatcccagcaactttgggaggcccaggcaggtggatcatctgagatcaggagttcaagaccagcctggtcaacatggtgaaaccccatctctgttaaaaacacaaaaattagccagtagtggtggcgggtgcctgcaatcccagctacacaggaggctaaagcaggagagtcacttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctgggcgacagagcgagacttcgtctcagaaaagaaag--aa-aaaataaaagattttggagctacatcgtgccggcgctgcagagaatgagtttcgttttgcggcacagtttttaggtggctactgggctctggtagagatggaccgtttggcctcacgtaggcagggccccgtgggacatcaggagccgaccatgacctggctgtgcactggcccaccaagcgatcaactggcgtgcccagccgctctccgtcatcacagagaagtggtttc i chlSab2.chr6 I 315 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I e papAnu2.chr19 47639733 1842 + 51301725 I a score=430377.000000 s hg38.chr19_GL949753v2_alt 388588 183 + 796479 tgtgagatttggttaaaggagtccctgaaggcCtgtgggaggcagaatagtgacctcccagagatgtccacctcctgaggcccagaccctgtgagttggggaagcttatgtggcaaaagggactttgcagatgtgattaagtcaaggatcttgggttggggagattacccaggtgggcctgat s panTro4.chr19 59581631 183 + 63644993 tgtgagatttggctaaaggagtccctgaagTCCtgtgggaggcagaatagtgacctcccagagatgtccacctcctgagccccagaccctgtgagttggggaagcttatgtggcaaaagggactttgcagatgtgattaagtcaaggatcttgggttggggagattatccaggtgggcctgat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56498002 183 + 60714840 tgtgagatttggctaaaggagtccctgaaggcCtgtgggaggcagaatagtgacctcccagagatgtccacctcctgagccccagaccctgtgaactggaggagcttatgtggcaaaagggactttgcagatgtgattaagttaaggatcttgggttggggagattatccaggtgggcctgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103192742 183 - 106955855 tgcaagatttggctaaaggagtccctgaaggTCtgtgggagacagaatagtgacctcccagagatgtccggctccagagccccagaccctgtgaattggggaaacttgtgtggcaaaagggactttgcagatgtgataaagttaaggatctggggttgggcagattatccaggtgggcctgat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60467835 183 + 64156825 tgcgagatttggctaaaggaatccctgaaggcCtgtgggaggcaaaatagtgaccttccagagatgtccacgtcctgagcctcagaccctgtgaatagggggagcttatgtggcaaaacaaactttgcagatgtgattaagttaaggatcttgggttggggagattatccaggtgggcctaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55566500 183 + 59248254 tgcgagatttggctaaaggaatccctgaaggcCtgtgggaggcaaaatagtgaccttccagagatgtccacgtcctgagcctcagaccctgtgaatagggggagcttatgtggcaaaacaaactttgcagatgtgattaagttaaggatcttgggttggggagattatccaggtgggcctaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47641575 183 + 51301725 TGAGAGATTTGGCTAAAGGAGTCCCTGAAGGCCTGTGGGAGGCAGAATAGTGACCTTCCAGAAATGTCCACGTCCTGAGCCTCAGACCCTGTAAATAGGGGGAGCTTATGTGGCAAAAcaaactttgcagatgtgattaagttaaggatcttgggTTGGggagattatccaggtgggcctaaT i papAnu2.chr19 I 1842 C 0 s chlSab2.chr6 47327913 182 + 50890351 tgagagatttggctaaaggaatccctgaaggcCtgtgggaggcagaacagtgaccttccagagatgtccacgtcctgagcctcagaccctgtgaatagggggaacttatgtggcaaaacgaactttgcagatgtgattaagttaaggatcttgggttggggagattatccaggtgggcc-aat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921979 56548 + 122678785 I e calJac3.chr22 3557341 97657 - 49145316 I a score=1094361.000000 s hg38.chr19_GL949753v2_alt 388771 477 + 796479 gtaatcacaaggggctgagtaagtgaaa-gaggaaggcaggagggtcagagtgagag--aaggaggtgagtgcatggaagcaggcggcagataacgggactggtggctttgaggttgg-agggaatggagaggcaggaatgcgggagcctgcagaggcttgaacaggcgagggaacagattc-tccttggagcctccaggaggacacggctctgatagcagcttcattttagcccagggagacccattttggacttgtgacctccgggacggtaagtcaataaacctacattatgtgaagccactaagcttgtggtgatttgttatggcag-----caaaaggaagctTTATGGTTCATCTGTACCCTGAAAATGCAGGtttttggtt-------ttttttttt-------------------------ttttCA-----------------CTTGTTCAATGATGTACCCCCAGTGTCAGGCGCTTTGCAAACACACGATACATACGGGTTGATGTTTG-GTCAAGAGAGGAATTA s panTro4.chr19 59581814 473 + 63644993 ataatcacaagaggctgagtaagtgaaa-gaggaaggcaggagggtcagagtgagag--aaggaggtgagtgcatggaagcagggggcagataacgggactggtggctttgaggttgg-agcgaattgagaggcaggaatgcgggagcctgcagaggcttgaacaggcgagggaacagattc-tccctggagcctccaggaggacacggctctgatagcagcttcattttagcccagggagacccattttggacttgtggcctccgggacagtaagttaataaacctatattatgtgaagccactaagc-tgtggtgatttgttatggcag-----caaaaggaagctTTATGGTTCATCTGTACTCTGAAAATGCAGGTTTTTGG----------TGTTTTTT-------------------------TTTTCA-----------------CTTGTTCAATGATGTACCCCCAGTGTCAGGCACTTTGCAAACACACGATATATACGGGTGGATGTTTG-GTCAAGAGAGGAATTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56498185 469 + 60714840 ataatcacaaggagctgagtaaatgaaa-gaggaaggcaggagggtgagagtgagag--aaggaggtgagtgcatggaagcagggggcagataacgggactggtggctttgaggatgg-agggaatggagaagcaggaatgcgggagcctgcagaggcttgaacaggcgagggaatagtttc-tccctggagcctccaggaggacacagctctgatggcagcttcattttagcccaaggagacccattttgaacttgtgacctccgggacggtaagtcaataaacctatgttatgttaagccactaagcttgtggtgatttgttatggcag-----caaaaggaagctTTATGGTTCATCTGTACTCTGAAAATgcagg-----gg----------tttttttt-------------------------ttttca-----------------cttgttcaatgatgtacccccagtgtcaggcacattgcaaatacacgatacatatgggttgaTGTTTG-GTCAAGAGAGGAATTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103192925 469 - 106955855 ataatcacaaggggctgagtaaatgacg-gaggaaggcaggagggtcagagtgagag--aaggaggtgagtgcatggaagcagagggcagataacgggaccagtggctttgaggatgg-agggaatggagaggcaggaacgc-agagcctgcagacgcttgaacaggcgagggaacagattc-tccctggagcctccaggaggacacagctctgatggcaacttcattttagcccaaggagactcattttggacttgtgacctccgggacggtgagtcaataaacctacattctgttaagccactaagcttgtggtgatttgttagggcag-----caaaaggaagctTTATGGTTCATCTGTACTCTGAAAACGCAGGTTT--------------GTTTTTTT-------------------------TTTTCA-----------------CTCGTTCAATGATGTACCCCCAGCATCAGGCACGTTGCAAATACACGATACATACGGGTTGATGTTTG-GGCAAGAGAGGAATTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60468018 485 + 64156825 gtaatcacaagggtctgagtaaatgaaacgggggaggcaggagggtcagagtgagag--aacggggtgagtggatggaagcaggggccagataacgggactggtggctttgaggatgg-aaggaatggtgaggccggaatgtgggagcctgcagaagcttgaacaggccggggaacggatcc-tccctggaacctccaggaagacacggctctgatggcaactgtgttttagtccaaggagagtcattttggacttgtgacctctgcaatggtaagtcaagaaacctacattatgttaagccactaagcttgtggtgatttgttatggcag-----caataggaaGGTTTATGGTTCACCTGTGCTCTGAAAACACAGGTTtttgtttgtttgtttgtttgttt-------------------------ttttCA-----------------CTTGTTCAATGATGTACCCCCAGCATCAGGCTTAGTGCAAATACACAATACATACGGGTTGATGTTTG-GGCAAGAGAGGAATTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55566683 485 + 59248254 gtaatcacaaggggctgagtaaatgaaacgggggaggcaggagggtcagagtgagag--aagggggtgagtggatggaagcaggggccagataacgggactggtggctttgaggatgg-aaggaatggtgaggccggaatgtgggagcctgcagaagcttgaacaggccagggaacggatcc-tccctggaacctccaggaagacacggctctgatggcaactgtgttttagcccaaggagagtcattttggacttgtgacctctggaatggtaagtcaagaaacctacattatgttaagccactaagcttgtggtgatttgttatggcag-----caataggaaGGTTTATGGTTCACCTGTGCTCTGAAAACACAGGtttttgtttgtttgtttgtttgttt-------------------------ttttCA-----------------CTTGTTCAATGATGTACCCCCAGCATCAGGCTTAGTGCAAATACACAATACATACGGGTTGATGTTTG-GGCAAGAGAGGAATTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47641758 485 + 51301725 GTAATCGCAAGGGGCTGAGTAAATGAAACGGGGGAGGCAGCAGGGTCAGAGTGAGAG--AAGGAGGTGAGTGGATGGAAGCAGGGGCCGGATAACGGGACTGGTGGCTTTGAGGATGG-AAGGAATGGTGAGGCCGGAATGTGGGAGCCTGCAGAAGCTTGAACAGGCCGGGGAACGGATcc-tccctggagcctccaggaAGACACGGCTCTGATGGCAACTGTGTTTTAGCCCAAGGAGACTCATTTTGGACTTGTGACCTCTGGAATGGTAAGTCAAGAAACCTACATTatgttaagccactaagtttgtggtgatttgttatggcGG-----CAATAGGAAGGTTTATGGTTCACCTGTGCTCTGAAAacacaggtttttgtttgtttgtttgtttgttt-------------------------ttttca-----------------cttgttCAATGATGTACCCCCGGCATCAGGCTTATTGCAAATACACAATACATACGGGTTGATGTTTG-GGCAAGAGAGGAATTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47328095 464 + 50890351 gtaatcacacggggctgagtaaatgaaacaggggaggcagcagggtcagagtgagag--aagggggtgagtagatggaagcaggggccggataacgggactggtggctttgaggatgg-agggaatggtgaggccggaatgtgggagcctgcagaagcttgaacaggccggggaacggatcc-tccctggagcctccaggaagacacagctctgatggcaactgtgttttagcccaaggagacccattttggacttgtgacctctggaatggtaagtcaagaaacctacattatgttaagccactaagcttgtggtgatttgttatggcag-----caataggaaGGTTTATGGTTCACCTGTgctctgaaaacacaggtttttgtttgt---------------------------------------------------------------ttgttcaatgatgtacccccagcatcaggcacattgcaaatacacaatacatacgggttgaTGTTTG-GGCAAGACAGGAATTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19891293 503 - 122678785 gtcatcacaaaggtcctcatgagtgaa--ggagtgggccagaggggcagggtcagaaccaaagaagagactccagagcagctggagc-----aacgtga-tgctggccctggagatggaaggggaccccaaggcatatgggcagga----gtagcagcttgcaaaggcaagggaatggattcatccccaggaactctaga-----acagcta-gattacaccttgactttaactcagggatgtccatgttgcaattctgtcctc-aaaaaggtaagataataaatctgtgctgctttaacccact-agcttgtagtgattggttatagcagcaacacaacaggaaaat------------tatacaCCAGATACACCTACTTTTAATTGTGTGCCTTTTTCTTTAGTTTTTTGTTTTGTGAATTTGAGCTTTACAAAGTAGTTTGAATCAGTCTAGTTCAGAGATGTATTTCTGGGA-CAGAGACATTGCAAACACTCAATA-ATACATATTGAAGTTTGTGTCACAAGAGGGTATC i canFam3.chr1 T 14827 C 0 e calJac3.chr22 3557341 97657 - 49145316 I a score=1086366.000000 s hg38.chr19_GL949753v2_alt 389248 360 + 796479 AGACCAGGCAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCAGAGAACCTGGTGCCTGCCTCAGCCCTAGCTCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGT-GGGCTGCTGATGGAACAACCCCATGACGAGAAGGACCCAGCCTCCAAGCGGCCACACCCTGTGTGTCTCTTTGTCCTGCC-GGCACTGAGGACTCATCCATCTGCACAGCTGGGGCCCCTGGGAGGAGACGCCATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGTGAGATTTAAAGAGGGGGAGGGGAGACCCGAGTCTTGGAGGAAATTTGC s panTro4.chr19 59582287 360 + 63644993 AGATCAGGCAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCAGAGAACCTGGTGCCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGT-GGGCTGCTGATGGAACAACCCCATGATGAGAAGGACCCAGCCTCCAAGCGGCCACACCCTGTGTGTCTCTTTGTCCTGCC-GGCACTGAGGACTCAACCATCTGCACAGCTGGGGCCCCTCGGAGGAGACGCCATGATCCCCACCCTCACGGCCCTGCTCTGCCTCGGTGAGATTTAAAGAAGGGGAGGGGAGACCCGAGTCTTGGAGGAACTTTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56498654 360 + 60714840 AGATCAGGCAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCAGAGAATCTGGTGGCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGT-GGGCTGCTGATGGAACAACCCCATGACAAGAAGGACCCAGCCTCCAAGCGGCCACACCCTGTGTGTCTCTCTGTCCTGCC-GGCACTGAGGACTCATCCATCCGCACAGCTAGGGCCCCTGGGAGGAGACGCCATGATCCCCACCCTCACGGCCCTGCTCTGCCTCGGTGAGATTTAAAGAGGGGGAGGGGAGACCCGAGTCTTGGAGGAACTTTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103193394 360 - 106955855 AGATCAGGCAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCGGAGAACCTGGTGCCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCGAATGAGAGCAGTTTCCCTTCCTGT-GGGTTGCGGATGAGACAACCCCATGACAAGAAGGACCCAGCCTCTGAGCGGCCACACCCTGTGTGTCTCTCTGTCCTACT-GGCACTGAGGGCTCATCCATCCACACAGCTGGGGCCCCTGGGAGGAGACGCCATGACCCCCACCCTCACGGCCCTGCTCTGCCTCGGTGAGATTTAAAGAGGGGGAGGGGAGACCCGAGTCTTGGAGGGACTTTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60468503 360 + 64156825 AGATGAGGGAGACAGCAG--GCTGGGATCAGAGAGATCACATTTCTG-TCTGAAATGTCTGCAGAGAACCTGGTGCCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGC-GGGCTGCTGATGGAACAACCCCATGACTAGAAGGACCCAGCCTCCGAGTGGCCACACACCGTGTGTCTCTCTGTCCCGCT-GGCACCGAGGACTCATCCATCTGCACAGCTGGGGCCACTGGGAGGAGACGCCATGACCCCCACCCTCATGGTCCTGTTCTGCTTAGGTGAGATTTAAGGAGGGGGAGGGGAGACCCGAGTCTTGGAAGAACTTTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55567168 360 + 59248254 AGATGAGGGAGACAGCAG--GCTGGGATCAGAGAGACCACATTTCTG-TCTGAAATGTCTGCAGAGAACCTGGTGCCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGC-GGGCTGCTGATGGAACAACCCCATGACTAGAAGGACCCAGCCTCCGAGTGGCCACACACCGTGTGTCTCTCTGTCCCGCT-GGCACCGAGGACTCATCCATCTGCACAGCTGGGGCCACTGGGAGGAGACGCCATGACCCCCCCCCTCACGGTCCTGTTCTGCTTAGGTGAGATTTAAGGAGGGGGAGGGGAGACCCGAGTCTTGGAAGAACTTTGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47642243 359 + 51301725 AGATCAGGGAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCAGAGAACCTGGTGCCTGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGGGTTCAAATGAGGGCAGTTTCCCTTCCTGC--GGCTGCTGATGGAACAACCCCATGACTAGAAGGACCCAGCCTCCGAGCGGCCACACACCGTGTGTGTCTCTGTCCCGCC-GGCACTGAGGACTCATCCATCTGCACAGCTGGGGCCACTGGGAGGAGACGCCATGACCCCCACCCTCATGGTCCTGTTTTGTTTAGGTGAGATTTAAAAAGGGGGAGGGGATACCTGAGTCTTGGAAGAACTTTGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47328559 354 + 50890351 AGATCAGGGAGACAGCAG--GCTGGGATCAGAGAGACCCCATTTCTG-TCTGAAATGTCTGCAGAGAACCTGG----TGCCCCAGCCCTAGCCCTGGGGAAATGAAAGCCAGGCTGGAGTTCAAATGAGGGCAGTTTCCCTTCCTGC-GGGCTGCTGATGGAACAACCCCATGACTAGAAGGACCCAGCCTCC--GCGGCCACACACCGTGTGTCTCTCTGTTCCGCC-GGCACTGGGGACTCATCCATCGGCACAGCTGGGGCCACTGGGAGGAGACGCCATGACCCCCACCCTCATGGTCCTGTTCTGCTTCGGTGAGATTTAAGGAGGGGGAGGGGAGACCCGAGTCTTGGAAGAACTTTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3654998 316 - 49145316 AGGTCAGGCAGGCAGTGG--CTAGGCGTTAGGGAGACCCTGTTTCTG-TCTGAAATGTCTGCAGAGAGCCTGGAGCTTACCCGAGCCCCATCCCTGGGGAAATGAGAGCC---CTGGG--------GAGGGCAGTTCCCCGTCCTGTGGGGCTGCAGGTGAGACAGTCTTGTGACAAGGAGAACACAGCCTCCA---GTCCACACTCTGTGTGCTCCTGTGTCCTCTCAGGCACTGTGGTCTCATC-------------------------------TGCCATGACCATCACCCTCTCAGTCGTGATTTGCCTCGGTGAGGTTTGAAGA-GGGGAAGGAAGACCCTAGTCTTGGAGGGAACTCAC i calJac3.chr22 I 97657 I 522 s canFam3.chr1 19891796 339 - 122678785 AGGCCAGGGAGACAGCAGTTTCTGGGTCAGGTGAGGCCTCAATTGTGATCAGAAACAACTGCAAAG--CCTGCTGCCTGCCTGAGCCTCAGCCCTTGGGAAATGACAGCTAGGCT------------------GTTCCCCTTCCTGTGGGGTGGCTGACGTGAAAACCCCGTGACAAGGAGGAC-TGGTCTCCGAGTGCCTGTGCTCCGTTCATCTGTCTGATCTATG-GACACCAAGGTCCC-TCCATCCGTATAGCTGGGA-CAGAGACAGGAGACATCATGACCCCCATCCTCACGGCCTTGCTCTGTCTAGGTGAGATCTGAGGA-GGGGAGGAGACACCATAGTCTGAGTGGGACCCAC- i canFam3.chr1 C 0 C 0 a score=83947.000000 s hg38.chr19_GL949753v2_alt 389608 33 + 796479 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC s panTro4.chr19 59582647 33 + 63644993 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56499014 33 + 60714840 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103193754 33 - 106955855 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60468863 33 + 64156825 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55567528 33 + 59248254 CTCACAGCCAGGCCCTGGTTCTTTAGGAGACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47642602 33 + 51301725 CTCACAGCCAGGCCCTGGTTCTTTAGAAGACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47328913 33 + 50890351 CTCACAGCCGGGCCCTGGTTCTTTAGGAGACTC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19892135 10 - 122678785 CCCACAGTCA----------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 3655314 522 - 49145316 I a score=55775.000000 s hg38.chr19_GL949753v2_alt 389641 142 + 796479 AAAAATCTCAGGGTAgccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaa s panTro4.chr19 59582680 142 + 63644993 AAAAATCTCAGGGTAgccgggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctattaaaaatacaa i panTro4.chr19 C 0 I 10 s ponAbe2.chr19 56499047 141 + 60714840 AAAAATCTCAGGGTagccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcatgaggtcaggagatcgagaccatcctggctaacacag-gaaaccccgtctctactaaaaatacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103193787 134 - 106955855 AAAAATCTCAGGGTACctgggcgcggtggctcccgcctggaatcccagcactttgggaggctgaggcgggcgga--------tcaggagatcgagaccatcctggctaacatggtgaaaccccatctctaccaaaaatacaa i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19892145 21 - 122678785 ---------------------------GGCCCTGGTCTGTCA--------------------------------------------------GAGACC-------------------------------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 3655314 522 - 49145316 I e chlSab2.chr6 47328946 0 + 50890351 C e papAnu2.chr19 47642635 0 + 51301725 C e macFas5.chr19 55567561 0 + 59248254 C e rheMac3.chr19 60468896 0 + 64156825 C a score=23597.000000 s hg38.chr19_GL949753v2_alt 389783 180 + 796479 aaaattagccgggggtggttgcaggcgcctgtggtcccagccactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcgcaccaccgcactccagcctgggtgac--agcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s ponAbe2.chr19 56499188 165 + 60714840 aaaattagctgggagtggttgcaggtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcaggaacccgggagacagagcttgcagtgagccgagattgcgccactgcactccagcctgggtgac--agcgagactccgtctcaaaaaaaaaaaaaa--------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103193921 170 - 106955855 aaaattagccggg-gtggttgcaggcgcctgtagtcccagctacttgggaggctgaggcaggagagtggcatgaacccgggaggtggagcttacagtgagccaagatcgcgccactgcactccagcatgggcgacatagcgagactccatcacaaaaaacaaaacaa-----------aaca i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 19892166 32 - 122678785 ------------------------------------CCAG--GGTCAGGAGGCTCA--------------------CTGGGAGG------------------------GCCTCA-------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 3655314 522 - 49145316 I e chlSab2.chr6 47328946 0 + 50890351 C e papAnu2.chr19 47642635 0 + 51301725 C e macFas5.chr19 55567561 0 + 59248254 C e rheMac3.chr19 60468896 0 + 64156825 C e panTro4.chr19 59582822 10 + 63644993 I a score=23412.000000 s hg38.chr19_GL949753v2_alt 389963 15 + 796479 aaaaaTCTCAGGGTA s ponAbe2.chr19 56499353 10 + 60714840 -----TCTCAGGGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103194091 15 - 106955855 aaaaaTCTCAGGGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60468896 15 + 64156825 AAAAATCACAGGGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55567561 15 + 59248254 AAAAATCACAGGGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47642635 15 + 51301725 AAAAATCACAGGGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47328946 15 + 50890351 AAAAATCTCAGGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19892198 0 - 122678785 C e calJac3.chr22 3655314 522 - 49145316 I e panTro4.chr19 59582822 10 + 63644993 I a score=2150132.000000 s hg38.chr19_GL949753v2_alt 389978 677 + 796479 AAGAGAGGACCTGCTCAGGCTTCCGGGGCAAATCCCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCACATGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCCAGGTCCCTCCTCCTCACT-GGGACAAGGGGCCACCCATGGGCAGCTGGGGGAGGAGACAGCAGTTCTGGG-TGACTGA-TGAGGATGACGGGGGGGTCCTGGGGCTGAGAGCTGGGATCTGAGGGCTGAGGA---------------------------AGGTCTTGGGATCCAGCCTCTGATTTTCTTCCAGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGTCAGCTCTCAGGGGCATCTCCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAG-GTGGGA s panTro4.chr19 59582832 677 + 63644993 AAGAGAGGACCTGCTCAGTCTTCCGGGGCAAATCCCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCCAGGTCCCTCCTCCTCACT-GGGACAAGGGGCCACCCATGGGCAGCTGGGGGAGGAGACAGCAGTTCTGGG-TGACTGA-TGGGGATGACGGGGGGGTCCTGGGGCTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------AGGTCTTGGGATCCAGCCTCTGATTTTCTTCCAGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTCAGGGGACCCTGGAGGCTCAGGAGTACCGTCTGGATAAAGAGGAAAGCCCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGAAGGCTGGTCACAGCCCAGCAACCCCCTGGAGCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGTCGGCTCTCAGGGGTGTCTCCCTCTCACAGCCCAGCCCTGGGGATGATGTGAGAG-GTGGGA i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56499363 674 + 60714840 AAGAGAGGACCTGTTCAGGCTTCAAGGGCAAATCCCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCACAGGTCCCTCCTCCTCACT-GGGACAAGGGGCCACCCATGGGCAGTTGGGGGAGGAGACAGCAGTTCTGGG-TGACTGA-TGAGGATGAC-GGGGGGTCCTGGGGCTGAGAGCTGGGATCTGAGTGT--GGGG---------------------------ACGTCTTGGGATCCAGCCTCCGATTTCCTTCCAGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCATCTGGAGAAGCCCTGTGATCATCTGGTGTCAGGGGACCCTGGAGGCCCAGGAGTACCGTCTGGATAAAGAGGGAAGCTCAGCACCCTGGGACAGACAGAACCCACTGGAGCCCAAAAACAAGGCCAGATTTTCCATCCCATCCATGACAGTGCACTATGCAGGGAGATACCGCTGTTACTATCGCAGCCCTGCAGGCTGGTCACAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGTCGGCTCTCAGGGGCGTCTCCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAG-GTGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103194106 674 - 106955855 AAGAGAGGACCTGCTCAGGCTTCAGGGGCAAATCTCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCGGGTGCAGGCAGGTGAGTCTGTCCCCAGCTATCCCAGGTC---CCTCCTCACT-GGGGACAAGGTCCACCTCTGGGCAGCTAGGGGTGGAGACCGCAGTTCTAGG-TGACTGA-TGGGGACATCTGGAGGGTCCTGGGACTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------AGGTCTTGGGATCCAGCCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCGCTCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCTCCGTGACCATCTGGTGTCAGGGGACCCTGGAGGCCCAGGGGTACCATCTCAATAAAGAGGGAAGCCCAGCATCCTGGGACACACAGAACCCACTGGAACCCAGGAACAAGGCCAAGTTCTCCATCCCATCCATGACAGAGCACCAGGCAGGGAGATACCGCTGTTACTATCACAGCCCTGCAGGCTGGTCAGAGCGCAGCAACCCCCTGGAGCTGGTGGTGACAGGTGAGAGGACACCCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGAAAGGGGGTCGGCTCCCAGGGGCGTCTCCCTCTCACAGCCCAGCCATGGGGATGATGTGGGAG-GTGGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60468911 678 + 64156825 AAGAGAGGACCTGCTCAGGCTTCAGGGGCAAATCTCTCACAGGGAACTCTCTTCCAGGGCGGAGTCTGGGCCCCAGGACCTGTGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCTAGGTCCCTCCTCCTCCCTGGGGACAAATGGCCACCCATGGGCAGCTGGGAGAGGAGACAGCAGTTCTGGG-TGACTGA-TGGCGACATCTGAAGGGTCCTGGGACTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------ACCTCTTGGGATGCAGCCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCACCGTCTGGGCTGAGCCTGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGACGCTCAGGAGTACTATCTGGATAAAGAAGGAAGCCCAGCACCCTGGGACACACAGAACCCACTGGAGCCCAGGAACAAGGCCAGATTCTCCATCCCATCCATGACACAGCACTATGCAGGGAGATACCGCTGTTACTATCACAGCCATCCAGACTGGTCAGAGGACAGCGACCCCCTGGACCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGTCCTTAGGAAAGGGGTCGGCTCTCAGGGGCATCTACCTCTCACAGCCCAGCCCTGGGGATGATGCGGGAG-GTGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55567576 678 + 59248254 AAGAGAGGACCTGCTCAGGCTTCAGGGGCAAATCTCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCTGTGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCCAGGTCCCTCCTCCTCCCTGGGGACAAAGGGCCACCCATGGGCAGCTGGGAGAGGAGACAGCAGTTCTGGG-TGACTGA-TGGCGACATCTGAAGGGTCCTGGGACTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------ACCTCTTGGGATGCAGCCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCACCGTCTGGGCTGAGCCTGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGACGCTCAGGAGTACCATCTGGATAAAGAAGGAAGCCCAGCACCCTGGGACACACAGAACCCACTGGAGCCCAGGAACAAGGCCAAGTTCTCCATCCCATCCATGACACAGCACTATGCAGGGAGATACCGCTGTTACTATCACAGCCATCCAGACTGGTCAGAGGACAGCGACCCCCTGGACCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGTCCTCAGGAAAGGGGTCGGCTCTCAGGGGCATCTCCCTCTCACAGCCCAGCCCTGGGGATGATGCGGGAG-GTGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47642650 678 + 51301725 AAGAGAGGACCTGCTCAGGCTTCAGGGGCAAATCTCTCACAGGGAACTCTCTTCCAGGACTGAGTCTGGGCTCCAGGACCTGTGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCCaggtccctcctcctccctggggaCAAAGGGCCACCCATGGGCAGCTGGGAGAGGAGACAGCAGTTCTGGG-TGACTGA-TGGCGACGTCTGAAGGGTCCTGGGACTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------ACGTCTTGGGATGCAGCCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCACCGTCTGGGCTGAGCCTGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGACGCTCAGGAGTACCGTCTGGATAAAGAAGGAAGCCCAGCACCCTGGGACATACAGAAcccactggagcccaggaacaAGGCCAAGTTCTCCATCCCATCCATGACAGAGCACTACGCAGGGAGATACCGCTGTTACTATCACAGCCATCCAGACTGGTCAGAGGACAGCGACCCCCTGGACCTGGTGATGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGTCCTCAGGAAAGGGGTCAGCTCTCAGGGGCGTCTCCCTCTTACAGCCCAGCCCTGAGGATGATGCGGGAG-GTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47328961 678 + 50890351 AAGAGAGGACCTGCTCAGGCTTCAGGGGCAAATCTCTCACAGGGAATTCTCTTCCAGGGCTGAGTCTGGGCACCAGGACCTGTGTGCAGGCAGGTGAGTCTGTCCCCAGCTGTCCCAGGTCCCTCCTCCTCCCTGGGGACAAAGGGCCACCCATTGGCAGCTGGGAGAGGAGACAGCAGTACTGGG-TGACTGA-TGGCGACATCTGAAGGGTCCTGGGACTGAGAGCTGGGATCTGAGGGCTGAGGG---------------------------ACCTCTTGGGATGCAGCCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCACTGTCTGGGCTGAGCCTGGCTCTGTGATCAGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGACGCTCAGGAGTACCGTCTGGATAAAGAGGGAAGCCCAGCACCCTGGGACAGACAGAAACCACTGGAGCCCAGGAACAAGGCCAAGTTCTCCATCCCATCCGTCACACAGCACTACGCAGGGAGATATCGCTGTTACTATCACAGCCATCCAGACTGGTCAGAGCGCAGTGACCCCCTGGAGCTGGTGGTGACAGGTGAGAGGACACTCAGGGGTCGCAGCCACAGGCTCTGTCCTCAGGAAGCAGGTCGGCTCTCAGGGGCGTCTCCCTCTCACAGCCCAGCCCTGGGGATAATGCGGGAG-GTGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3655836 657 - 49145316 AGGAGAGGAACTGCTGGGGCTTCGGGGG-AAATCTCTCACAGGGAACTCTCTTCCAGGGCTGAGCCTGGGCCCCAGGACCAGCGTGCAGTCAGGTGAGTCTGTCCCTAGCTGTCCCAGGCC---ACTCCTCTCTGGGGACAAGGGCCCAACCCTGGGCATCTGGGGGAGGAGACACCAGTTCTGGGCTGACTGA-TGGAGATGTCTGGAGGGTCCCGGGGCTGAGAGCTGGGATCTGAGGGGTGAGGATCTTGGCATCCCTCAGATATCCTTGGCATATCTTGGCAT-CAGTCTCTGATTCCATTCCAGGCACCATCCCCAAACCTACCCTCTGGGCTGAGCCAGGCTCTGTGATAGCCTGGTTCAGCCCCATGGCCCGCTGGTGTCAGGGGCCCCTGGAGACTGTGAAGTACCGTCTGGATAAGG-------------------------ACAGAACGCACTGGAGCCCGGAGCCAAGGCCAAGTTCCACGATCCATCCATGGGATTTGATGCTGCAGGGCAGTACCGCTGCTACTAT--GAGACCTGCAGGCTGGTCAGAGCCCAGTGACCCCATGGAGCTGGTGGTGACAGGTGAGGTGACACTCAGGGGCCCCAGCCACAGGCTCTGCCCTCATGAAGGAGATCGGCTCTC-----------------ACAGCCCAGTCTTGGGGATACGGCGGGAG-GTGTGA i calJac3.chr22 I 522 T 55819 s canFam3.chr1 19892198 645 - 122678785 ------------GCTCAGAATTCA-GGGCAAACCTCTCATAGGG-ACTCTCTTCCAGGGCTGAGTGTGGGCTCCAGGGACTCAGTGCAGGCAGGTGAGTCTGTCCCCAGGGGTCCCA-GTCCCACCTCCTCACTGGGGACAGGGAATACCCACCAGGCAGGGGGGATGGAGATCAGCAGCTCTGGGTTGACAGAGGGGGGACATCTGGGTGTT--TGGGGCT--GAGTTGGGAACTGAGGGTGGAGAG----------------------------GACCTTGTGACCCAGCCTCTG-TTTCCTTCCAGGGACCCTCCCCAAACCCACCATCTGGGCTGAGCCAGGCTCTGTGATCCCCATGGAGACATCAGTGACCCTCTGGTGTAAGGGGAGCCTGAAAGCCCAGAAGTACGTCCTGTATAAAGATGGATACCCAGAGACCTGGGAGGAGCAGAAGCCACTGGAGCCGAAGGACAAGGCCAAGTTCCCCATCACAGACATGACAAGTGTATATGCAGGACGGTATCACTGTTACTATGAAAGCCCCACTGGCTGGTCGGAGCCCAGTGACCAGCTGGAGCTGGTGGTGACAGGTGCGAAG------------CCTA--CTCAGGTCTTGCCCTCAGGAAGAAGGTCTGCTCTCA-GGGTGTCACCCTTTTACAGCCCATCCCTAGGGATCATGTGGGGGAATCTGA i canFam3.chr1 C 0 C 0 a score=288107.000000 s hg38.chr19_GL949753v2_alt 390655 84 + 796479 GCCCCATTTAACACGGTGCCTCCTTCTCTCCTAGGAGCCTACAGTAAACCCACCCTTTCAGCCCTGCCGAGTCCTCTTGTGACC s panTro4.chr19 59583509 84 + 63644993 GCCCCATTTAACATGGTGCCTTCTTCTCTCTTAGGAGCCTACAGCAAACCCACCCTCTCAGCCCTGCCGAGTCCTCTTGTGACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56500037 84 + 60714840 GCCCCATTTAACATGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCACCCTCTCAGCCCTGCCGAGTCCTCTTGTGACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103194780 84 - 106955855 GCCCCATTTAACACGGTGCCTCCTTCTCTCCTAGGATTCTATGCAAAACCCACCCTCTCAGCCCTGCCAAGTCCTCTTGTGACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60469589 84 + 64156825 GACCCATTTAACATGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCATCCTCTCAGTCCTGCCGAGTCCTCTTGTGACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55568254 84 + 59248254 GACCCATTTAACATGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCATCCTCTCAGTCCTGCCGAGTCCTCTTGTGACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47643328 84 + 51301725 GACCCATTTAACATGGTGCCTCCTTCTGTCCTAGGAGCCTACAGCAAACCCATCCTCTCAGTCCTGCCGAGTCCTCTTGTGACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47329639 83 + 50890351 G-CCCATTAAACACGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCACCCTCTCAGTCCTGCCGAGTCCTCTTGTGACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3600674 84 - 49145316 GCCCCACTTAACACGGGGCCTCCTTTTCTCCTAGGAGTCTACAGGAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGACC i calJac3.chr22 T 55819 I 1057 s canFam3.chr1 19892843 83 - 122678785 GCCCCATTTAACACAGCCCCTCC-CCTCTCCTAGGGATGCACAGCAAACCCAGCCTCTCAGTTCTGCCCAGCCCTATCGTGCCC i canFam3.chr1 C 0 C 0 a score=42371.000000 s hg38.chr19_GL949753v2_alt 390739 12 + 796479 TCAGGAAAGAGC s panTro4.chr19 59583593 12 + 63644993 TCAGGAAAGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56500121 12 + 60714840 TCAGGAAAGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103194864 12 - 106955855 TCAGGAAAGAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60469673 12 + 64156825 TCAGGAGAGAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55568338 12 + 59248254 TCAGGAGAGAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47643412 12 + 51301725 TCAGGAGAGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47329722 12 + 50890351 TCAGGAGAGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3601815 12 - 49145316 TCAGGAGAGGAC i calJac3.chr22 I 1057 C 0 s canFam3.chr1 19892926 12 - 122678785 TCAGGAGGGAAC i canFam3.chr1 C 0 I 1046 a score=3578707.000000 s hg38.chr19_GL949753v2_alt 390751 1256 + 796479 GTGACCCTGCTGTGTCAGTCACGGAGCCCAATGGACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGTGAG--GCTCCTGACCCTGTCCTCTCTGAGCTCAGTGGCTCCGTTCA-TGCCCTGCTGCCAGGAGAGCTCTGGGCAGGGATGGAGGGAG-----------AGGGGCTCAGCCAGTGGGGGACTCAGCCCTCAGAGGGGAGGAGGACAACAGGGGCCCTCCCAGGCATGCCCATGCTCTTCTCCCTCACCTAGGGTCCAGAAGGTGCCAGGTGGACAGAGAAATGGTCCTTGGGAAGCTGCAGGGCAGATATAG-GGAGAGGTTCAATTTGATGTGGAGACCCAA-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGGGTCCCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGGTGAGTCTCAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCCGAGGCCTGTCTCAAGACATGCTCAGTGGATCTAAGTCCTCGTTCCAAT-TCTCAGC-TGGGC-TTGCTTCCACGGGTGTGGGAGTCGGGCAGCGACTTG-GGAGGCACCACAGGCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTGGTGAGGGGTGAGGGGGTCAAGGCTGAAGGAGATGTTGCGG--------------GGAGAAGCCGAGCTGATGCGGGG--AGCAGG-GCAG--------CCCCAGCCCTCACAT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAGTGGTGAGTgaggggctctg--agtgggaggtgggcagggtctaggggagccaagggtgggttctgtcctaggttaaggctcctctggaggtggtgatgtggacaggcccctcccctgcatgggcctcagtttctccaagtgtaaaggagagaggcctg---c-gggtgggaaagttcctttcagctctgacTCCCAGCTGTGCCCTCCTGGGAGAGGAGGCCTCCCAGGGAA-CCTCCCAGACC-CGATTCCGCAGGGGCCTGTCCGGTCCCACCTGCAG------CAGAGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCGGTG----------------------GTTCAAGACAG---------- s panTro4.chr19 59583605 1252 + 63644993 GTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGGTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGTGAG--GCTCCTGACCCTGTCCTCTCTGAGCTCAGTGGCTCAGTTCA-TGCCCTGCTGCCAGGAGAGCTCTGGGCAGGGATGGAAGGAG-----------AGGGGCTCAGCCAGTGGGGG-CTCAGCCCTCAGAGGGGAGGAGGACAACAGGGGCCCTCCCAGGCATGCCCATGCTCTTCTCCCTCACCTAGGGTCCAGAAGGTGCCAGGTGGGCAGAGAAATGGTCCTTGGGAAGCTGCAGGGCAGATATAG-GGAGAGGTTCAATTTGATGTGGAGACCCAG-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGGGTCCCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGGTGAGTCTCAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCTGAGGCCTGTCTCAAGACATGCTCAGTGGATCTAAGTCCTCGTTCCAAT-TCTCAGC-TGGGC-TTGCTTCCACAGATGTGGGAGTCGGGCAGCGACTTG-GGAGGCACCACAGGCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTGGTGGGGGGTGAGGGGGTCAAGGCTGAAGGAGATGTTGCGG--------------GG---AGCCGAGCTGATGTGGGG--AGCAGG-GCAG--------CCCCAGCCCTCACAT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGCCCCTCATGCCTACACGGTCAGGCCCCCACAGTGGTGAGTGAGGGGCTctg--agtgggaggtgggcagggtctaggggagccaagggtgggttctgtcctaggttcaggctcctctggaggtggtgatgtggacaggcccctcccctgcatgggcctcagtttctccaagtgtaaaggagagaggcctg---c-gggtgggaaagttcctttcagctctgacTCCCAGCTGTGCCCTCCTGGGAGAGGAGGCCTCCCAGGGAA-CCTCCCAGACC-CGATTCCACAAGGGCCCGTCCTGTCCCACCTGCAG------CAGAGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGAGGTG----------------------GTTCAAGACAG---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56500133 1306 + 60714840 GTGACCTTGCTGTGTCAGTCACAGAGCCCGATGGACACTTTTCTTCTGATCAAGGAGGGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCGCGTAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCATGGGGGGATCTACAGGTGCTTCAGCTCACACAGCTTCTCCCACTACCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGTGAG--GCTCCTGACCTTGTCCTCTCTGAGCTCAGTGGCTCAGTTCA-TGCCCTGCCACCAGGAGAGCTCTGGGCAGGGATGGAGGGAG-----------AGAGGCTCAGCCAGTGGGGGACTCAGCCCTCAGAGGGGAGGAGGACAACAAGGGCCCACCCAGGCATGCCCATGCTCTTCTCCCTCACCTAGGGTCCAGAAGGTGACAGGTGGGCAGAGAAATGGTCCTTGGGAAGCTGCAGGGCAGATATAG-GGAGAGGTTTGATTTGATGCAGAGACCCAG-GGGCAACCCCAGACTCTCACCCTCCTCTTGTTCTTCTACCCAGGATCCTTGGAGGGTCCCAGCCCCTCACCCGCAAGGTCCATCTCAACAGCTGGTGAGTCTCAGAGGCCTCTGTCCAGGGAGTTTCCAAAGCCCGAGGCCTGTCTCAAGACATGCTCAGTGGATCTAAGTCCTCGTTCCAAT-TCTCAGC-TGGGC-TTGCTTCCACAGATGTGGGAGTCGGGCAGCGACTTG-AGAGGCA-----------------CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAGGCTGGGCTGGTGAGGGGTGAGGGGGTCAAGGCTGA---AGATGTTGCGG--------------GCAGAAGCCGAGCTGATGTGGGG--AGCAGG-GCAG--------CCCCAGCTCTCACAT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGGCCCCCACAGTGGTGAGTAAGAGGCTctg--agtgggaggtgggcagggtctaggggagccaagggtgggttctatcctaggttcaggctcctctggaggtggtgatgtggacaggtccctcccctgcctgggactcagtttctgcaagtataaaggagagaggtgtg---c-gggtgggaaagttcctttcagctctgacTCCCAGCTGTGACCTCCTGGGAGAGGAGGCTTCCCTGGGA--------GGGAC-CAATTCCACAAGGGCATGTCCTGTCCCACCTGCAG------CAGAGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCCGTG----------------------GTTCAACACAG---------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103194876 1247 - 106955855 GTGACCCTGCTGTGTCAGTCGCGGAGCCCGATGGACACTTTCCTTCTGATCAAGGAGGGGGCAGCCCATCCCCTACTGCGTCTGAGATCAGAGCACCAAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACAGCTTCTCCCACTACCTGCTGTCATACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGTGAG--GCCCCTGACCCTGTCCTCTCTGAGCTCAATGGCTCAGTTCA-GGCCGTGCCGCCAGGAGAGCTCTGGGCAGGGATGGAGGGAG-----------AGGGGCTCAGCCAGTGGGGGACTCAGCCCTCAGAGGGGAGGAGGACAACAGGGGCCCTCCCGGGCATGCCCATGCTCTTCTCCCTCACCTAGGGTCCAGAAGGTGCCAGGTGGGCAGAGAAATGGTCCTTGGGAAGCTGCAGGGCAGATATAG-GGAGAGGTTCAATTTGATGTGGAGACCCAG-GGGCAACCCCAGACTCTCA-GCTCTGCTTGTCCTTCTACCCAGGATCCTTGGAGGGTCCCAGCCCCTCACCCACAAGGTCCATCTCAACAGCTGGTGAGTCTCAGAGGCCTCTGTCCAGAGAATTTCCAAAGCCCGAGGCC-GTCTCAAGACATGCTCAGTGGATCTCAGTCCTCGTTCCAAT-TCTCAGC-TGGGCTTTGCTTCCACGGATGTGGGAGTCAGGCAGCGACTTG-GGAGGCACCACAGGCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTGGTGAGGGGTGAGGGGGTCAAGGCTGAAGGAGATGTTGCGG--------------GGAGAAGCCGAGCTGATGTGCGG--AGCAGG-ACAG--------CCCCAGCCCTCACAT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACAAGCCCCTCATGCCTACAGGGTCAGGCCCCCACAGTGGTgagtg-ggggctctg--agtgggaggtgggcagggtctaagggagccaagggtgggttctgtcctaggttcaggcccctctggaggtggtgatgtggacaggtccctcccctgcctgggactcagtttctcaaagtgtaaaggagagaggcacg---t-gggtgggaaagttcctttcagctctgacTCCCAGCTGTGACCTCCTGGGAGAGGAGGCTTCCCTGGGA--------GGGAC-CGATTCCGCAAGGGCCTGTCCTGTCCCACCTGCAG------CAGAGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCCGTG----------------------GTTCAAGACAG---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60469685 1254 + 64156825 GTGACCCTGCTGTGTCAGTCACAGAGCCCGATGGACACTTTCCTTCTGTTTAAGGAGGGGGCAGCCCATCCCCTGCCGCGTCTGAGATCACAGCACGGAGCTCAGCTGCACTGGGCTGAATTCCCCATGGGTCCTGTGACCTCAGTGCATGGGGGGACCTACAGGTGCATCAGCTCACGCAGCTTCTCCCACTACCTGCTGTCACGCCCCAGTGACCCCGTGGAGCTCACTGTCTTAGGTGAG--GCTCCCGACCCTGTCCCCTCTGAGCTCAATGGCTCAGCTCA-GGCCCTGCCGCCAGGAGAGCTCTGGGCAGGGACGGAGGAAG-----------GGGGGCTCAGCCAAGGGGAGACTCAGCCCTCAGAGGGGAGGAGGACAAC-GGGGTCCTCCCAGGCCTGCCCATGCTCTTCTCCCTTACCCGGGGTCCAGAAGGTGCCAGGAGGGAAGAGACATGGTCCCTGGGAAGCCACAGGGCAGATGTAG-GAAGAGGTTCAATTTGAGGTGGAGACTCCA-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGAGTCCCAGCCCCTCACCCACAAGGTCCATCTCAGCAGCTGGTGAGTCTTAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCCGAGGCCTGTCTCAAGACACGCTCAGTGGATCTAAGTCCTCGTTCCAAT-TCTCAGC-TGGGC-TTGCTTCCAAGGATGTGGGAGTCGGGCAGTGACTTG-GGAGGCACTGCAGCCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTAATGTGGGGTGA-GGGGTCAAGGCAGAGGGAGATGTTGGGA--------------GGAGAAGCCGAGCTGAGGTCGGG--GGCAGG-GCAG--------CCCCAGCCCTCACGT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGCCCCTCATGCCTACGGGGTCAGACCCCCAGAGTGGTGAGTGAGGGGCTCTG--ATTGGGAGGTGAATGGAGTCCctggggggcaggggtgggctctctcctaggttcaggctcctctggaggtggtgacgtggacaggcccctcccctgcctgggcctcagtttctccaggtgtaaaggagagaggcctg---c-gggtgggaacgttcctttcagctctgacTCCCAGCTGTGACCTCCTGGGAGAGGAGGCCT-CCAGGGAAGGCTCCCAGAGT-CGATTCCACAGGGGCCTGTCCTGTCCCACCTGCAG------CGGTGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCTGTG----------------------GTTCAGGACGG---------- i rheMac3.chr19 C 0 I 125 s macFas5.chr19 55568350 1255 + 59248254 GTGACCCTGCTGTGTCAGTCACAGAGCCCGATGGACACTTTCCTTCTGTTTAAGGAGGGGGCAGCCCATCCCCTGCCGCGTCTGAGATCACAGCACGGAGCTCAGCTGCACTGGGCTGAATTCCCCATGGGTCCTGTGACCTCAGTGCATGGGGGGACCTACAGGTGCATCAGCTCACGCAGCTTCTCCCACTACCTGCTGTCACGCCCCAGTGACCCCGTGGAGCTCACTGTCTTAGGTGAG--GCTCCCGACCCTGTCCCCTCTGAGCTCAATGGCTCAGCTCA-GGCCCTGCCGCCAGGAGAGCTCTGGGCAGGGACGGAGGAAG-----------GGGGGCTCAGCCAAGGGGAGACTCAGCCCTCAGAGGGGCGGAGGACAGC-GGGGTCCTCCCAGGCCTGCCCATGCTCTTCTCCCTTACCCGGGGTCCAGAAGGTGCCAGGAGGGAAGAGACATGGTCCCTGGGAAGCCACAGGGCAGATGTAG-GAAGAGGTTCAATTTGAGGTGGAGACTCCG-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGAGTCCCAGCCCCTCACCCACAAGGTCCATCTCAGCAGCTGGTGAGTCTTAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCCGAGGCCTGTCTCAAGACACGCTCAGTGGATCTAAGTCCTCGTTCCAAT-TCTCAGC-TGGGC-TTGCTTCCAAGGATGTGGGAGTCGGGCAGTGACTTG-GGAGGCACTGCAGCCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTAATGCGGGGTGA-GGGGTCAAGGCAGAGGGAGATGTTGGGA--------------GGAGAAGCTGAGCTGAGGTGGGG--GGCAGG-GCAG--------CCCCAGCCCTCACGT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGTCCCTCATGCCTACGGGGTCAGACCCCCAGAGTGGTGAGTGAGGGGCTctg--agtgggaggtgaatggagtccctggggggcaggggtgggctctgtcctaggttcaggctcctctggaggtggtgacgtggacaggcccctcccctgcctgggcctcagtttctccaagtataaaggagagaggcctg---c-gggtgggaacgttcctttcagctctgacTCCCAGCTGTGACCTCCTGGGAGAGGAGGCCTCCCAGGGAAGGCTCCCAGAGT-CGATTCCACAGGGGCCTGTCCTGTCCCACCTGCAG------CGGTGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCTGTG----------------------GTTCAAGATGA---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47643424 1247 + 51301725 GTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGTTTAAGGAGGGGGCAGCCCATCCCCTGCCGCGTCTGAGATCACAGCACGGAGCTCAGCTGCACCGGGCTGAATTCCCCATGGGTCCTGCGACCTCAGTGCATGGGGGGACCTACAGGTGCATCAGCTCACGCAGCTTCTCCCACTACCTGCTGTCACGCCCCAGTGACCCTGTGGAGCTCACTGTCTTAGGTGAG--GCTCCTGACCCTGTCCCCTCTGAGCTCAATGGCTCAGCTCA-GGCCCTGCCCACAGGAGAGCTCTGGGCAGGGACGGAGGAAG-----------GGGGGCTCAGCCAAGGGGAGACTCAGCCCTCAGAGGGGAGGAGGACAAC-GGAGTCCTCCCAGGCCTGCCCATGCTCTTCTCCCTTACCTGGGGTCCAGAAGGTGCCAGGAGGGAA-------GGTCCCTGGGAAGCCACAGGGCAGATGTAG-GAAGAGGTTCAATTTGAGGTGGAGACTCCG-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGAGTCCCAGCCCCTCACCCACAAGGTCCATCTCAGCAGCTGGTGAGTCTTAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCCGAGGCCTGTCTCAAGACACGCTCAGTGAATCTAAGTCGTCGTTCCAGT-TCTCAGC-TGGGC-TTGCTTCCAGGGATGTGGGAGTCGGGCAGTGACTTG-GGAGGCACTACAGCCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGCTGGGCTAATGCGGGGTGA-GGGGTCAAGGCAGAGGGAGATGTTGGGA--------------GGAGAAGCCGAGCTGAGGTGGGG--GGCAGG-GCAG--------CCCCAGCCCTCACGT--CCCTGTTCTAA-CCCAGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGACCCCCAGAGTGGTGAGTG-GGGGCTCTG--AGTGGGAGGTGAATGGAGTCCctggggggcaggggtgggctCTGTCCTAGGTTCAGGCTCCTCTGGAGGTGGTGACGTGGAcaggcccctcccctgcctgggcctcagtttctccaggtGTAAAGGAGAGAGGCCTG---C-GGGTGGGAACGTTCCTTTCAGCTCTGACTCCCAGCTGTGACCTCCTGGCAGAGGAGGCCTCCCAGGGAAGCCTCCCAGAGT-CGATTCCACAGGGGCCTGTCCTGTCTCACCTGCAG------CAGTGACGGTGacct----ggggcaggggagggga-------gcagCGCCGTG----------------------GTTCAGGACGG---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47329734 1254 + 50890351 GTGACCCTGCTGTGTCAGTCATGGAGCCCGATGGACACTTTCCTTCTGTTTAAGGAGGGGGCAGCCCATCCCCTGCTGCGTCTGAGATCAGAGCACGGAGCTCAGCTGCACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGTGCATGGGGGGACCTACAGGTGCATCAGCTCACGCAGCTTCTCCCACTACCTGCTGTCACGCCCCAGTGACCCCGTGGAGCTCACAGTCTTAGGTGAG--GCTCCTGAGCCTGTCCCCTCTGAGCTCAATGGCTCAGCTCA-GGCCCTGCCCCCAGGAGAGCTCTGGGCAGGGACGGAGGAAG-----------GGGGGCTCAGCCAAGGGGAGACTCAGCCCTCAGAGGGGAGGAGGACAAC-GGGGTCCTCCC-GGCATGCCCATGCTCTTTTCCCTTACCTGGGGTCCGGAAGGTGCCAGGAGGGGAGAGACATGGTCCCTGGGAAGCCACAGGGCAGATGTAG-GAAGAGGTTCAATTTGAGGTGGAGACTCCG-GGGCAACCCCAGACTCTCACCCTCCTCTTGTCCTTCTACCCAGGATCCTTGGAGAGTCCCAGCCCCTCACCCACAAGGTCCATCTCAGCAGCTGGTGAGTCTTAGAGGCCTCTGTCCAGAGAGTTTCCAAAGCCTGAGGCCTGTCTCAAGACATGCTCAGTGGATCTAAGTCCGCGTTCCAAT-TCTCAGC-TGGGC-TTTCTTTCAGGGATGTGGGAGTCGGGCAGTGACTTG-GGAGGCACTACAGCCTCCCAAGGCC-----------------------------------------------------------------------------CTGAGGATGGGCTCATGCGGAGTGA-GGGGTCAAGGCAGAGGGAGATGTTGGGA--------------GGAGAAGCCGAGCTGAGGTGGGG--GGCAGG-GCAG--------CCCCAGCCCTCACGT--CCCTGTTCTAA-CCCAGCAGGCTCTGAGGACCAGCGCCTCATGCCTACAGGGTCAGACCCCCAGAGTGGTGAGTGAGGGGCTCTG--AGTGGGAGGTGAATGCGGTCCctggggggcaggggtgggctctgtcctaggttcaggctcctccgaaggtggtgacgtggacaggcccctcccctgcctgggccccagtttctccaagtataaaggagagaggcctg---g-gggtgggaacattcctttcagctctgacTCCCAGCTGTGATCTCCTGGGAGAGGAGGCCTCCCAGGGAAGCCTCCCAGAGT-CGATTCTGCAGGGGCCTGTCCTGTCCCACCTGCAG------TGGTGACGGTGACCT----GGGGCAGGGGAGGGGA-------GCAGGGCTGTG----------------------GTTCAAGATGA---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3601827 1203 - 49145316 GTGACCCTGCTGTGTCAGTCACAGAGTCCGATGGACACTTTCCTTCTGACCAAGGAGGGAGCAGCCCATCACCCCCAGTATCTGAAATCAAAGCACCAAGCTCATAAGGACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCAGGAACCTACAGGTGCTATGGCTCACGCAGCTCCAACCCCTACCTGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAG--GGCCCTGACCATGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCCTGCCCCCAGGAGAGCTCTGGGCTGGGATGGAGGGAGCGGGGTCTGAAGGAGGCTCAGCCAGAGCGGC-CTCAGGCCTCAGAGGGAAGGAGGACAAT-GGGGCCCTCCCAGGCACACCCACCCTCAGCAGCATCGCC-AGCATCATGAAGAGGAGAGGCGGGTAGGGGAGGGGACA--GGAGGGCCACAGGGCTGATGT---GGAGAAATTTGGTTTGAGGTGGAGGCTTCA-GGCAAGGCCCAGCTCCTCTGCCTCCTCCCATTCCT-TACCCAGGACCCTCCAGTGGACCCAGCCCTCCACCCACCGGTCCCACCCCCACACCTGGTGAGTAACTAACGCCTCTCAGCTGGG--------CAGTCCCGGGTCT-------------CCCAGAGGATCCTGTTCCAC--TCAAGG-ACTCAGCACAGAC-TTCCCTCCA-------GAGGGCTGGGCAGAGACAGACAGGGGCA---CAGGCTCCCAGGGCT-----------------------------------------------------------------------------CTGAGGCTGG-----TGAGGGGCAG-GAGGTCGAGGCAGTGGGAGATGATGGGGCCCAGCCTGAGGGAGGAGCAGCCGGACTGACATGGGG--AGCAGG-TCAG--------CCCCAATCCTCATGT--CCCCATCCTGA-CCCAGCAGTCCCTGAGGACCAGCTTTTCACTCCCATGGAGCCAGATCCCCACAGTGGTTAGTCGGGGTCTCTG--AGCGGGAGGTGGGTGGGGTCCAGGGGAGGCAGGGCTCAGTT----------------------------------------Caggcccctcccctgcctaggcctcagtttctccaagtgtaaaggagagaggcctg---cagggtgggaaagttccttttagctctgacTCCCAGCTGTGACCTCCTGAGAGAGGAGGCCACCTAGGGAAGCCTCCCAGGCC-TGATTCCTCAGGAGCCTGTCCTGTCCCAACTGCAGCAGTGACAGTGACGGTGACCT----GGGGCAGAGGAGGGGA-------GCAGGGCTTTG----------------------GTTCAGTAGG----------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19893984 1146 - 122678785 GTGACCCTGCTGTGTCAGTCACTGAGCAATGTGGACACATTCCTTCTGTCCAAGGATGGGGCAGCTGATGCCTCCTTGCGTCTTAGATCGAAGTACCGAGCTGGGAAGTACGAGGCTGAATTCTCCATGAGTCCTGTGACCCCAGCCCATGGGGGGACCTACAGGTGCTACGGCTCTATCAAAACCTCTCCCTACCTGTTGTCATACCCCAGTGTCCCCGTGGAGATCCTGGTCTCAGGTGAGTAGCCCTTGCCCCTGTCCCCTCCATGTGCTAACATTGTTCTCAGGGCCCTGTGCCCACAAAAGCACAGGGCTGGGATGG-GAGAG-----------GGGGGCTC------TGAGGGGTCCACCCCTC-------------ACACT----GCCCTCCTACACCTG-----GTTCTTCTCTCG-ACCCCGTCACCAGAATTCTCCAGGTGGA-GGAGGAGGAGTACCTGGGGA-CCTCAGGGTAAATAAGGAGGAGGAGTGTGAGCATAGGCAGGGTCTCTGTGGGAAGCTCTAGCCT------CCTCTCCTGACTTTTTTCCCAGGATCCTTTGGACACCATGGCCCCCCACCCACAATGTCCAGCCCAACAGCTGGTGAGTCACAGGGGCGTCCATCCAG------------------GGCCT------------------------------TTGGTTCCAGTCTCTCAGA---GAT-------------------------GACAGGGGGCCG-ACGGGCA----------CCAGGGAT-----------------------------------------------------------------------------CTT-GGCTGG--TGGAGGAGGCTGG-GTGTTCATGGGATAGGGAGGGGTGGGGA---------------------CCCATCTGGGGGAGGGGCAGCAGGTGCAGTGGAAGCACACAGGCCCTCCCCTGACCCTCTACTGACCCCAGGAGGCTCTGAG---------------------------------------GGTAAGTGAGGGTCTCTGTCAGGAGGTGGTGGGT-GGGTAGTGGGGAGCAGAGGCTGAGTTACACCCTCACTTCATGACCCCTTACATTCCCTatcttggacatgcccctcccatgtgtgggcctcagtttccccaagtgtaaaagagagagtcatggccc-agattagatttgtcc--tcggttctgac-catggctctgacctcctGGGTGAGGAGGGCTCATGGGGAGGTTCCCCAAGTCATGATTCTAGGGGGGT---GCCTGTCCC-TCTGCAG------CAGTGACAGTGACATTGTAGGGGGAGGGGAGGGAAGTTGATGGCTGGGGGGTGTTGAGGTCTGGAAGGACTCTCAGCTCAGGATGAAGATGCTGGG i canFam3.chr1 I 1046 C 0 a score=842890.000000 s hg38.chr19_GL949753v2_alt 392007 305 + 796479 TCAGGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCtggtgca-gga----acaagggct---------------------gca-gctcagac---------------tcccgggtttccttcccagctctgccgcttcctggctggaggggtctggggcaggcgattcccctctctgagcctcagtttgtgcatctgtgaaatgggtggagagagggtggcaatctcaggttgcacaactgctgtgagggttggaggtaatgaaagaaagacccagcac---acacagtaggtgc---acacacagtaggtgtgcacatcaatgacaTCA--TCCCCATTCCTGATGTCATCACG- s panTro4.chr19 59584857 306 + 63644993 TCAGGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCtggtgcaggga----acaagggct---------------------gca-ggtcagac---------------tcccgggtttccttcctagccctgccgcttcctggctgcaggggtctggggcaggcgattcccctctctgagcctcagtttgtgcatctgtgaaatgggtggagagagggtggcaatctcaggttgcacaactgctgtgagggttgaaggtactgaaagaaagacccagcac---acacagtaggtgc---acacacagtaggtgtgcacatcaatgACATCA--TCCCCATTCCTGATGTCATCACG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56501439 305 + 60714840 TCAGGCTCTTTCCCTGCAACTCTGGGGCTC--GGCTCTGTtgcaggga----acaagggct---------------------gca-ggtcagac---------------tcctgggttcccttcccagctctgccgcttcctggctgg-ggggtctggggcaggcgatttccctctctgagcctcagtttcctcttttgtgaaatgagtggagagagggtggcaatctcaggttgcacaactgctgtgagggttggaggtaatgaaagaaagacccagcac---acacagtaggtgc---atacacagtaggtttGCACATCAGTGACATCA--TCCCCATTCCTGACATCATCATG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103196123 288 - 106955855 TCAGGCTCTTTCCCTGCAGCTCTGGGGCTC--GGCTCtggtgca-gga----acaagggct---------------------gca-ggtcagac---------------tcctgggctcccttcccagctctgccgcttcctggctgg-ggggtctggggcaagcgattcccctcgctgagcctcagtttcctcct-tgtgaaatgggtggagagagggtggcaatctcaggttgcacaactgctgtgagggttggagggaatgaaagaaagacccagtac---acacagtaggtgc------------------tcacatcaatgACATCA--TCCCCTTTCCTGACGTCATCACG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60471064 304 + 64156825 TCAGGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCtggtgcaggga----ataagggct---------------------gca-gatcagag---------------tcccgggttcactttttaactctgctgcttcctggctg--gggacctggggcaggcgattcccctctctgagcctcagtttcctcccttgtgaaatgagtagagagagggtggcaatctcaagttgcacgactgctgtgagggttggaggtaatgaaagaaagatccagcac---acacagtaggtgt---gcgcacagtaggtgctcacatcagtgacaTCA--TCCCCATTCCTGATGTCATCACG- i rheMac3.chr19 I 125 C 0 s macFas5.chr19 55569605 304 + 59248254 TCAGGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCtggtgcaggga----ataagggct---------------------gca-gatcagag---------------tcccgggttcactttttaactctgctgcttcctggctg--gggacctggggcaggcgattcccctctctgagcctcagtttcctcctttgtgaaatgagtagagagagggtggcaatctcaagttgcacgactgctgtgagggttggaggtaatgaaagaaagatccagcac---acacagtaggtgt---gcgcacagtaggtgctcacatcagtgacaTCA--TCCCCATTCCTGATGTCATCACG- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47644671 304 + 51301725 TCAGGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCTGGTGCAGGGA----ACAAGGGCT---------------------GCA-GGTCAGAG---------------TCCCGGGTTCCTGTCCTAGCTCTGCTGCTTCCTGGCTG--GGGGCCCAGGGCAGGCaattcccctctctgagcctcagtttcctcctttgtgaaATGGGTGGAGAGAGGGTGGCAATCTCAAGTTGCACGACTGCTGTGAGGGTTGGAGGTAATGAAAGAAAGACCCAGCAC---ACACAGTAGGTGT---GCGCACAGTAGGTGCTCACATCAGTGACATCA--TCCCCATTCCTGATGTCATCACG- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47330988 304 + 50890351 TCAAGCTCTTTCCCTGCAACTCTGGGGCTT--GGCTCtggtgcaggga----acaagggct---------------------gca-ggtcagag---------------tcccgggttcccttcctagctctgctgcttcctggctg--ggggcctgggacaggcgattcccctctctgagcctcagtttcctcctttgtgaaatgggtggagagagggtggcaatctcaagttgcatgactgctgtgagggttggaggtaatgaaagaaagacccagcac---acacagtaggtgt---gcgcacagtaggtgctcacatcagtgacaTCA--TCCCCATTCCTGATGTCATCACG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3603030 316 - 49145316 TCACGCTCTTTCCCTGCAGCTCCAGGGCTC--AGCTCAGGTGCAGGGA----ACAAGGGCTGTCCTCCTTCCCTGGCTCTCAGCA-GATCAAAC---------------Tcccaggttcccttcccagctctgctgctgcctagctgg-ggggcctggggcaggcgactcccctctctgagcctcagttt-tttgtctgtaaagtgggtggggtggatgtgtcaattccgcgctgctcgactgtagtgggggttgaaggtggtgaataagaggccgagcag---tcacc-------t---gcacacagtaggcgctca-atcagtaACACCA---CCCCATTCCTGACGTCCTCATG- i calJac3.chr22 C 0 N 0 s canFam3.chr1 19895130 317 - 122678785 ACAGATCCTGCCC---CAAATGAGGAGCCCAGAGCCTCGGAGTGGTGACCTCACAGGGGAG---------------------GCATGAGTagagcacagggaaccttcatcccaacttcctgtcccagccctgccacctccatgctga-gcaacctgagacacgtgattgattgctctgtgcctcagtttcca-gtctgtggagcaggtggg--agggacgacaatcccctgctgcatgatcgttctcagagtcacaggtg-------------caagcacggagcccaacaggtgcctggcacacagtaggcgctcagtaaaatggaatcactctctcattCATGGTATAGCTCCTG i canFam3.chr1 C 0 C 0 a score=709876.000000 s hg38.chr19_GL949753v2_alt 392312 215 + 796479 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTctccatcctgcttctctccctcctcctcttcctcctcctccAACACTGGCGTCAGGGAAAACACAGGACATTGGGTAAGTAGGAAATTGGGGG-ACCC------------------GTGGGCTGATGGAGGGTGGGCTCAGGGCACCAGCCAAAGGGACTCCAGA----TAGGAGAGGTCATCTTAGAA s panTro4.chr19 59585163 215 + 63644993 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCAtcctgcttctctccctcctcctcttcctcctcctccAACACTGGCGTCAGGGAAAACACAGGACATTGGGTAAGTAGGAAATTGGGGG-ACCC------------------ATGGGCTGATGGAGGGTGGGCTCAAGGCACCAGCCAAAGGGACTCCAGA----TAGGAGAGGTCAGCTTAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56501744 215 + 60714840 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCAtcctgcttctctccctcctcctcttcctccttctccAACACTGGCATCAGGGCAAACACAGGACATCGGGTAAGTAGGAAATTGGGGG-ACCC------------------GTGGGCTGATGGAGGGTGGGCTCAGGGCACCAGCCAAAGGGACTCCAGA----TAGGAGAGGTCAGCTTAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103196411 215 - 106955855 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTctccatcctgcttctctccctcctcctcttcctcctcctccAACACTGGCGTCAGGGCAAACACAAGACATCGCGTAAGTAGGAAATTGGGGG-ACCC------------------GTGGGCTGATGGAGGGTGGGCTCAGGGCACCAGCCAAAGGGACTCCAGA----TAGGAGAGGTCAGCTTAGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60471368 215 + 64156825 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGTGGTCTTGGTGGTCTCCATCCTGCTTCTCTCCCTCGTCTTCTTTCTCCTCCTCCAACACTGGCGTCAGGGCAAACACAGGACATCAGGTAAGAAGGAAATTGGGGG-ACCT------------------GTGGGCCGATGCAGGGTGGGCTCAGAGCACTAGCCAAAGAGACTCCAGA----TAGGAGAGGTCAGCTTAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55569909 215 + 59248254 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTctccatcctgcttctctccctcgtcttctttctcctcctccAACACTGGCGTCAGGGCAAACACAGGACATCAGGTAAGAAGGAAATTGGGGG-ACCT------------------GTGGGCCGATGCAGGGTGGGCTCAGAGCACTAGCCAAAGAGACTCCAGA----TAGGAGAGGTCAGCTTAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47644975 215 + 51301725 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGtctccatcctgcttctctccctcctcttctttctcctcctccaacactggcATCAGGGCAAACACAGGACATCAGGTAAGAAGGAAATTGGGGG-ACCT------------------GTGGGCCGATGCAGGGTGGGCTCAGGGCACTAGCCAAAGAGACTCCAGA----TAGGAGAGGTCAGCTTAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47331292 215 + 50890351 CCCAAGGTCTGAGAAGGCACTGGGAGGTACTGATCGGGGTCTTGGTGGTctccatcctgcttctctccctcctcttcttcctcctcctccAACACTGGCGTCAGGGCAAACACAGGACATCAGGTAAGTAGGAAATTGGGGG-ACCC------------------GTGGGCCGATGCAGGGTGGGGTCAGGGCGCTAGCCAAAGAGACTCCAGA----TAGGAGAGGTCAGCTGAGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45788675 212 + 49145316 ctcaaggTCTGGGAAGGCACCTGGGGGTTGTGATCAGGGTCTCAGTGGCCTTCG----GCTACTGCTCTTCCTCCTCATCCTCCTCCTCTGACACTGGCATCAGGGCGAACACAGGACATTGGGTGATTAGGAAATGGGGGGAACCC------------------ATGGACTGACTGAAGGTAGGGTCAGGGCACCAGCTAAAGAGAATCCATA----TGGGAAAAGTCAGctcagaa i calJac3.chr22 N 0 I 448 s canFam3.chr1 19895447 236 - 122678785 CCCAAGGTCCTAGCTGGTACCTGTATGTCCTCATTGGGGCCTCGGTGGCCTTCATCCTGATGCTCTGCCTCCTTATCCTCCTCCTGGTCCGACAGCAACGTCGGGGCAAATGCAGGAAGTCGAGTAAGAAGG-GGCTGAGGC-ACCCCAGGGGTGGTGGTGCTCTGTGGGCTGACCCAGGGTGGGCTCAGGGCAGCGGCCAGAGGGAACCCAGAGAGGTGGGAAAGGCCGATGTAGGA i canFam3.chr1 C 0 C 0 a score=227933.000000 s hg38.chr19_GL949753v2_alt 392527 98 + 796479 ACTCTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATGAATGAGG---------GAGTAATGGAAGTGCTTTATTCTTTCGGTTTTTCTAAACTTAG s panTro4.chr19 59585378 98 + 63644993 ACTCTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAATGAGG---------GAGTAATGGAAGTGCTTTATTCTTTCGGTTTTTCTAAACTTAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56501959 98 + 60714840 ACTCTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAATGAGG---------GCATAATGGAAGTGTTTTATTCTTTCGGTTTTTCTAAACGTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103196626 98 - 106955855 ACTCTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAATGAGG---------GCATAATGGAAGTGCTTTATTCTTTCGGTTTTTCTAAACTTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60471583 96 + 64156825 A--CTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAAGAAGG---------GCATAACGGAAGTGCTTTATTCTTTCGGTTTTTCTACACTTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55570124 96 + 59248254 A--CTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAAGAAGG---------GCATAACGGAAGTGCTTTATTCTTTCGGTTTTTCTACACTTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47645190 96 + 51301725 A--CTGCTCCAGAAATTCCCAGtgagaaaatctagaaagaagaaaataaagaagg---------gcATAACAGAAGtgctttatttttgtggtttttctacACTTAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47331507 96 + 50890351 A--CTGCTCCAGAAATTCCCAGTGAGAAAATCTAGAAAGAAGAAAATAAAGAAGG---------GCATAATGGAAGTGCTTTATTCTTTCGGTTTTTCTACACTTAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19895683 97 - 122678785 -CACTTCCACAG-AATCTCAAGTCAGAGAGTCTAGACAGAAAACACCCAGGTTGGCTCCCATGTGCCAATAGAAGGTGCTCCCCTC--------TTTTCAATCTTGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45788887 448 + 49145316 I a score=1189482.000000 s hg38.chr19_GL949753v2_alt 392625 403 + 796479 --AAAGTATTTAAAACATCCTTGCAAGTGTATTTTCAGGTTTC---CTTTCCTCTTGACTTGCATGTGCAAGGCAGGTGGTTCTAACGTTCCCAGAGCTGAGACTCTGTCCATCTTCCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTAA-TTCTGCCCAAAGA-CCTCAGACTCCCACCCATCCCAACAGCCACCTCACTGTCCC-CTTACACTCCCGTATCCTCCCCCAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGAGTGAGAGGCAGAGAAGGTGCACCTG-GGGTGGAGCTGGGGGTCCCAAAATTTCAATAGCAATGGGGGCAGGAGCACAGGCTAGGA---- s panTro4.chr19 59585476 402 + 63644993 --AAAGTATTTAAAACATCCTTGCAAGTGTATTTTCAGGTTTC---CTTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACGTTCCCAGAGCTGAGACTCTGTCCATCTTCCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTAA-TTCTGCCCAAAGA-CCTCAGACTCCCACCCATCCCAACGGCCACCTCACTG-CCC-CTTACACTCCCGTATCCTCCCCCAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACCTCTGTGAGTGAGAGGCAGAGAGGGTGCACCTG-GGGTGGAGCTGGGGGTCCCAAAATTTCAATAGCAATGGGGGCAGGAGCACAGGCTAGGA---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56502057 402 + 60714840 --AAAGTATTTAAAACATCCTTGCAAGTGTATTTTCTGGTTTC---CTTTCCTCTTGAGTTGCATGTGCAAAGCAGGTAGTTCTAACATTCCCAGAGCTGAAACTCTGTCCACCTTCCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTAA-TTCTGCCCGAAGA-CCTCAGACTCCCACCCATCCCAACAGCCACCTCACTG-CCC-CTCACACTCCCGTATCCTCCCCCAGGTCCAGCCCAGCTGCTGATGTCCAGGGAGAAAACCTCTGTGAGTGAGAGGCAGAGGGGGTGCACCTG-GGTTGGAGATGGGGGTCCCAAAGTTTCAATAGCAATGGGGGCAGGAGCACAGGCTAGGA---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103196724 400 - 106955855 --AAAGTATTTAAAACATCCTTGCAAGTGTATTTTCAGGTTTC---CTTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACATTCCCAGAGCTGAGA--CTGTCCACCTTCCCCCAGCACAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGACGGGGGCCTACAGAAGAGGTAA-TTCTGCCCAAAGA-CCTCAGACTCCCACCCATCCCAACGGCCACCTCACTG-CCC-CTTACACTGCTGTATCCTCCCCCAGGTCCAGCCCAGCTGCTGACCTCCAGGGAGAAAACCTCTGTGAGTGAGAGGCAGAGGGGGTGCACCTG-GGGTGGAGATGGGGGTCCCAAAGTTTCAATAGCAATGGGGGCGTGAGCACAGGCTAGGA---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60471679 402 + 64156825 --GAAGGATTTAAAACATCCTTGCAAGTGTATTTTCGGGTTTG---TCTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACATTCCGAGAGCTGAGACTCTGTGCACCTTTCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGATGGGGGTCTACAGAGGAGGTAA-TTCTGCCAGAAGG-CCTCAGACTCCCACCCACCCCAACAGCCACCTCACTG-CCC-CTCACACTCCCGTATCCTCCCCCAGGTCCAGGCCAGCTGCTGACGTCCAGGGAGAAAACCCCAGTAAGTGAGAGGCAGAGGGGGTGCACCTG-GGGTGGAGATGCGGGCCCCAAAGTTTCAATAGCAATGGGGGCAGGAGTACAGGCTGGTA---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55570220 402 + 59248254 --GAAGGATTTAAAACATCCTTGCAAGTGTATTTTCGGGTTTG---TCTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACATTCCGAGAGCTGAGACTCCGTGCACCTTTCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGATGGGGGTCTACAGAGGAGGTAA-TTCTGCCAGAAGG-CCTCAGACTCCCACCCACCCCAACAGCCACCTCACTG-CCC-CTCACACTCCCGTATCCTCCCCCAGGTCCAGGCCAGCTGCTGACGTCCAGGGAGAAAACCCCAGTAAGTGAGAGGCAGAGGGGGTGCACCTG-GGGTGGAGATGCGGGCCCCAAAGTTTCAATAGCAATGGGGGCAGGAGTACAGGCTGGTA---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47645286 402 + 51301725 --GAAGGATTTAAAACATCCTTGCAAGTGTATTTTCAGGTTTA---TCTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACATTCCAAGAGCTGAGACTCTGTGCACCTTTCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGATGGGGGTCTACAGAGGAGGTAA-TTCTGCCAGAAGG-CCTCAGACTCCCACCCACCCCAACAGCCACCTCACTG-CCC-CTCACACTCCCGTATCCTCCCCCAGGTCCAGCCCAGCTGCTGACATCCAGGGAGAAAACCCCAGTAAGTGAGAGGCAGAGGGGGTGCACCTG-GGGTGGAGATGCAGGCCCCAAAGTTTCAATAGCAATGGGGGCAGGAGTACAGGCTGGTA---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47331603 402 + 50890351 --GAAGGATTTAAAACATCCTTGCAAGTGTATTTTCGGGTTTG---TCTTCCTCTTGAGTTGCATGTGCAAGGCAGGTGGTTCTAACATTCCGAGAGCTGAGACTCTGTGCACCTTTCCCCAGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCAGAGCCAGAGCCCAAGGATGGGGGTCTACAGAGGAGGTAA-TTCTGCCAGAAGG-CCTCAGACTCCCACTCACCCCAACAGCCCCCTCACTG-CCC-CTCACACTCCCGTGTCCTCCCCCAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACCCCAGTAAGTGAGAGGCAGAGGGGGTGCACCTG-GGGTGGAGATGCGGGCCCCAAAGTTTCAATAGCAATGGAGGCAGGAGTACAGGCTGGTA---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45789335 398 + 49145316 --AATGTATTTAAAACATTTATGCCAGTGTGTTTTCAGGTTTCCTTCTTTCCTCTTGAGTTCTGCCTGCAGAGCAGGTGGTTGTAACGATCCCAAGGCT--CACTCTGTCCTTCTTCACCCAGCCCAGAGGGAGGCTGATTTCCAAAGTCCTGCGGGGGCTACGGAGCCAGAGAACAAGGACACAGGCCTGCAGAGGAGGTGA-TTCTTCCTGGAGA-GCGCAGACGCCCAGCCACCCC-ACAGCCCCCTCACTG-CCC-CTCACACTCCCAGGTCCTTTTCCAGGCCCAACCCAACTGCTGGTGTACAGAAAGAAAACCTCT----GTGACAGGAAGAGAGGG-ACACCTGAGGGTGGAGACAGAAACCCCACAATTTCAGTAGCAGTGACAGCAGGGGAAAAGGCTGAGA---- i calJac3.chr22 I 448 I 125 s canFam3.chr1 19895780 315 - 122678785 GAGATGGA---GAAACACACAGGCAA-TGCGGGTGAAGGGCTC---CTTTCC-CTGGAATCACATG---GAGCGGGGAGGTTGTAACCTT-----------------------------CCATCCCAGAGGAATGATGATTCCTAATGTCCAGCAGGGGATGCAGACCCAGAGCCCAAGGACAGAGGCCTTCAGGACAGGTAACTCCTGCCCACAGACCCCCACACTCCCACCCGCTC-----GCCCCCTGCATG-CCCTCTGACAC-CATGTCTCCT-CCCCAGCTCCAGGCCAGCTGCTGTCGCCCAGGAGGAAACCCTCT----GTGAGAGG--AAGGGGCCACCCTGG-GGGTG----------------------------------------------GGCTGGGAAGGT i canFam3.chr1 C 0 C 0 a score=2189654.000000 s hg38.chr19_GL949753v2_alt 393028 896 + 796479 TTGGTCAGGGACTCAGGGAGAAGT---GGTCTGAACCCACATTGTGGGACCTCGGGGACATCACAGCCC----CTCCCTGCGTTGCAGTGGCACTA-ATGGGAACAGGGCAGGGACCAGCAGGAATGAGAGGTCCCAGGGAACCTTCCCAGGAGATGAACCCCTTGCTCTACCCCAGCAGGTGCTGCCGTGAAGGACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGGTGAgaacccgcccctgtccccggcaccaaaggcctcctggtgccagatctaatcc--tgcaggacttctctgtcctccttcccccggctctcagcatcgt--cacggtggacccctccttgtccagcacgctgcctcctgcctgctgggacctcactctctcctgctgtcctgggacctcatgg-gcctcctcccgggtccccttcct--gctcctcatcctctgtttggccatctggttgttagagagc-tccccaggcctcagGAGGATG-ACGAATAAATGAACCACTCCAGTCCCCTGGGCTCCCCTTCattcattcatctagtgagtgttcccagggagctcactgtggatggggctccccatgggagctgcagacacagcagggagcaaagccg-cccccgcctcctgagctcacctcgt-ggtgggagacaaaatgcaaataaatgcatcgtgtccaggagtgcaacgtgctgtaaggaacataaaccaggtaaagggcagagagtgtggggcagtggggccagtctgaat-ggaaagggagggctgtctgctcagctgtcatctgagaagcctggacggagagggccacgtgatcctctaatggacgagcccctgcaggcagaggaaacagccgtgcaaaggccccgaggcagcagcgagctcttgcaggaagg s panTro4.chr19 59585878 896 + 63644993 TTGGTCAGGGACTCAGGGAGAAGT---GGTCTGAACCCACATTGTGGGACCTCGGGGACATCACAGCCC----CTCCCTGCATTGCAGTGGCACTA-ATGGGAACAGGGCAGGGACCAGCAGGAATGAGAGGTCCCAGGGAACCTTCTCAGGAGATGAACCCCTTGCTCTACCCCAGCAGATGCTGCCGTGAAGAACACACAGCCTGAGGACAGGGTGGAAATGGACACTTGGGTGAGACCCCGCCCCTGTCCCAGGCACCAAAGGCCTCCTGGTGCCAGATCTAATCC--TGCAGGACTTCTCTGTCCTCCTTCCCCCGGCTCTCAGCATCGT--CACGGTGGACCCCTCCTTGTCCAGCACTCTGCCTCCCGCCTGCTGGGACCTCACTCTCTCCTGGTGTCCTGGGACCTCGTGG-GCCTCCTCCCCGGTCCCCTTCCT--GCTCCTCATCCTCTGTTTGGCCCTCTGGTTGTTAGAGCGC-TCCCCAGGCCTCAGGAGGATG-AGGAATAAATGAACCACCTCGGTCCCCTGGGCTCCCCTTCattcattcatccagcgagtgttcccagggagctcactgtggattgggctccccatgggagctgcagacacagcagggaggaaagccg-cccccgcctcctgagctcacctcat-ggtgggagacaaaatgcaaatgaatgcactgtgtccaggagtgcaatgtgctgtaaggaacataaaccagggaaagggcagagagtgtggggcagtggggccagtctgaat-ggaaggggagggctgtctgctcagttgtcatctgagaagcctggacggagggggccacacgatcctctaatggacgagcccctgcaggcagaggaaacagccatgcaaaggccccgaggcagcagcgagctcttgcaggaagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56502459 896 + 60714840 ATGGTCAGGCACTCAGGGAGAAGT---GATCTGAATTCACATTGTGGGACCTCGGGGACATCACAGCCC----CTCCCTGCGTTGCAGTGGCACTA-ATGGGAACAGGGCAGGGACCAGCAGGAATGAGAGGTCCCAGGGAATCTTCCCAGGAGACGAACCCCTTGCTCTGGCCCAACAGATGCTGCCATGAAGGACACACAGCCTGAGGATGGGGTGGAGCTGTACAGTCGGGTGAGGCCCCTCCCCTGTCCCGGGCACGAAAGGCCTCCTGGTGCCAGATCTAATCC--AGCAGGACTTCTCTGTCCTCCTTCCCCCGGCTCTCAGCATCGT--CATGGTGGACCCCTCCTTGTCCAGCATGCTGCCTCCCGCCTGCTGGGACCTCACTCTCTCCTGGTGTCCTGGGACCTCGTGG-GCCTCCTCCCGGGTCCCCTTCCT--GCTCCTCATCCTCTGTTTGGCCCTGTGGTTGTTAGAGCGC-TCCCCAGGCCTCAGGAAGATG-AGGAATAAATGAACCACCTTGGTCCCCTGGGCTCCCCTTCattcattcaaccagcgagtgttcccacggagctcactgaggatcgggctccccatggttgctgcagacacagcagggagcaaagccg-cccccgcctcctgagctcacctcgt-ggtgggagacaaaatgcaaataaatgcactgtgtccaggagtgcaacgtgctgtaaggaacataaaccagggaaagggcagagagtgtggggcagtggggccagtctgaat-ggaaggggagggctgtctgctcagctgtcatctgagaagcctggacggagggggccacacggtcctctaatggacgagcccctacaggcagaggaaacagccatgcaaaggccccgaggcagcagcgagctcttgcaggaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103197124 882 - 106955855 ATGGTCAGGGACTCAGGGAGAGGT---GGTCTGAAGCCACGTTGTGGGACCTCGGGGACATCACAGCCC----CTCCCTGCATTGCAGTGGCACTA-ATGGGAACAGGGCAGGGACCGGCAGGAATGAGAGGTCCCAGGGAACCTTCCCAGGAGACGAACCCCTTGCTCTGCCCCAGCAGATGCTACCGTGAAGGACACACAGTCTGAGGACCGGGTGGAGCTGGACACTCAGGTGAGACCCCGCCCTTGTCCCGAGCACCAAAGGCCTCCTGATGCCAGATCTAATCC--TGCAGGACTTCTCTGTCCTCCTTCCCCCGGCTCTCAGCATCGT--CACGGTGGGCCCCTCCTTGTCCAGCATGCTGCCTCCCGCCTGCTGCGACCTCACTCTCTCCTGCTGTCCTGGGACCTCATGG-GCCTCCTCCCGGGTCCCCTTCCT--GCTCCTCGTCCTCTGTTTGGCCATCTGGTTGTTAGAGCGC-TCCCCAGGCCTCAGGAGGATG-AGGAATAAATGAACCACC-CGGTCCCCTGGGCTCCCCTTCattcattcatccagcgagtgttcccagggacctcgctgtggatcaggctccctgtgggagctgcagacacagcagggagcagagccg-cccccgcctcctgagctcacctcgt-gctgggagacaaaatgcaaatagatgcgccgtgtccagcagtgcaacgtgctgtaaggaacataaaccagggaaagggcagagagtgtggggcagtggggccagtctgaat-ggaaggggagggctgtgtgctcagctgtcatctgagaagcctggatggagggggccacacgatgctctaatggacgagcccctataggcagaggaaacagccgtgcaaaggccccgaggca-------------gcaggaaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60472081 884 + 64156825 AGGGTCAGGGACTCGGGGGGAGGT---GGTCTGAACCCACACTGTAGGACCTCGGGGACATCACAGCCC----CTCCCAGCATCACGGTGGCCCTA-ATGGGAACAGGGCAGGGTCCGGCAGGAATGAGCGGTCCCAGGGAACCTTCCCAGGAGAAAAACCCCTTGCTCTGCCCCAGCAGATGCTGCCATGAAGGACACACAGCCTGAGGACGGGGTGGAGCTGGACAGTCAGGTGAGACCCCGCCCCTGTCCCAGGCACCAAAGGCCTCCCGGTGCCAGATCTAATCC--TGCAGGACTTCTCTGTCCTC-TTCCCCCGGTTCTCAGCATCAT--CACGGTGGACCCCTCCTTGTCCAGCACGCTGCCTCCCGCCTGCTGTGACCTCACTCTCTCCTGCTGTCCTGGGACCTCACAG-GCCTCCTCCCGGCTCCCCTTCCC--ACTCCTCCTCCTCTGTTTGACCGTCTAGTTGTTAGAGCGC-TCCCCAGGCCTCAGGAGGATG-AGGAATAGATGAACCACCCCGGTCCCCTGGGCTCCGCTTCattcattcatccagcgagtgttcccagggagctcactgtggatcgggctccctgtgggagctgcagacacagcagggagcagagccg-cccccgcctcctgagctcacctcgt-ggtgggagacaaaatgcaaataaatgca-tgtgtccaggagtgcaatgtgctgtaagaaacataaaccagggaaagggcagag----------tgtggggccagtctgaat-gtaaggggagggctgtctgctcagctgtcatctgagaagcctggacggagggggccacaggatcctctaatggacgagcccctgcaggcagaggaaacagccgtgcaaaggccccgaggcagcagcgagcTCTTGCAGGAAGG i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55570622 883 + 59248254 AGGGTCAGGGACTCGGGGGGAGGT---GGTCTGAACCCACACTGTAGGACCTCGGGGACATCACAGCCC----CTCCCAGCATCACGGTGGCCCTA-ATGGGAACAGGGCAGGGTCCGGCAGGAATGAGCGGTCCCAGGGAACCTTCCCAGGAGAAAAACCCCTTGCTCTGCCCCAGCAGATGCTGCCATGAAGGACACACAGCCTGAGGACGGGGTGGAGCTGGACAGTCGGGTGAGACCccgcccctgtcccgggcaccaaaggcctcctggtgccagatctaatcc--tgcaggacttctctgtcctc-ttcccccggttctcagcatcat--cacggtggacccctccttgtccagcacgctgcctcctgcctgctgtgacctcactctctcctgctgtcctgggacctcgcag-gcctcctcccggctccccttccc--gctcctcctcctctgtttgaccgtctagttgttagagcgc-tccccaggcctcagGAAGATG-AGGAATAGATGAACCACCCTGGTCCCCTGGGCTCCCCTTCattcattcatccagcgagtgttcccagggagctcactgtggatcgggctccctgtgggagctgcagacacagcagggagcagagcca-cccccacctcctgagctcacctcgt-gatgggagacaaaatgcaaataaatgca--gtgtccagcagtgcaatgtgctgtaagaaacataaaccagggaaagggcagag----------tgtggggccagtctgaat-gtaaggggagggctgtctgctcagctgtcatctgagaagcctggacggagggggccacaggatcctctaatggacgagtccctgcaggcagaagaaacagccgtgcaaaggccccgaggccacagcaagctcttgcaggaagg i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47645688 891 + 51301725 AGGGTCAGGGACTCGGGGGGAGGT---GGTCTGAACCCACACTGTGGGACCTCGGGGACATCACAGCCC----CTCCCTGCATCACGGTGGCCCTA-ATGGGAACAGGGCAGGGTCCGGCAGGAATGAGCGGTCCCAGGGAACCTTCCCAGGAGACAAATCCCTTGCTCTGCCCCAGCAGATGCTGCCATGAAGGACACACAGCCTGAGGACAGGGTGGAGTTGGACAGTCGGGTGAGACCCCGCCCCTGTCCCGGGCACCAAAGGCCTCCTGGTGCCAGATCTAATCC--TGCAGGACTTCTCTGTCCTC-TTCCCCTGGCTCTCAGCATCGT--CACGGTGGACCCCTCCTTGTCCAGCATGCTGCCTCCCGCCTGCTGTGACCTCActctctcctgctgtcctgggacctcgcgg-gcctcctcccgggtccccttccc--gctcctcctcctcTGTTTGGCCGTCTGGTGGTTAGAGCGC-CCCCCAGGCCTCAGGAGGATG-AGGAATAGATGAACCACCCCAGTCCCCTGGgctcc-cttcattcattcatccagcgaGTGTTCCCA-GGAGCTCACTGTGGATCGGGCTCCCTGTGGGAGCTGCAGACATAGCAGGGAGCAGAGCCG-CCCCCGCCTCCTGAGCTCACCTCGT-GATGGGagacaaaatgcaaataaattca--gTGTCCAGCAGTGCAATGTGCTGTAAGAAACATAAACCAGGGAAAGGGCAGAGAGTGTGGGGCAGTGGGGCCAGTCTGAAT-GTAAGGGGAGGGCTGTCTGCTCAGCTGTCATCTGAGAAGCCCAGACGGAGGGGGCCACAGGATCCTCTAATGGACAAGCCCctgcaggcagaagaaacagccgTGCAAAGGCCCCGAGGCAGCAGCGAGCTCTTGCAGGAAGG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47332005 895 + 50890351 AGGGTCAGGGACTCGGGGGGAGGT---GGTCTGAACCCACACTGTAGGACCTCAGGCACATCACAGCCC----CTCCCTGCATCACAGTGGCCCTA-ATGGGAACAGGGCAGGGTCCGGCAGGACTCAGAGGTCTCAGGGAACCTTCCCAGGAGACAAACGCCTTGCTGTGTCCCCGCAGATGCTGCCATGAAGGACACACAGCCTGAGGACGGGGTGGAGCTTGACAGTCAGGTGAGACCccgcccctgtcctgggcaccaaagacctcctggtgccagatctaatcc--tgcaggacttctctgtcctctttcccctggttctcagcatcat--cacggtggacccctccttgtccagcatgctgcctcccgcctgctgtgacctcactctctcctgctgtcctgggacctcgcgg-gcctcctcccgggtccccttcct--gctcctcctcctctgtttggccgtctggtggttagagcgc-tccccaggcctcagGAGGATG-AGGAATAGATGAACCACCCCAGTCCCCTGGGCCCCGCTTCattcattcatccagcgagtgttcccagggagctcactatggatcgggctccctgtgggagctgcagacacagcagggagcaaagcca-cccccgcctcctgagttcacctcgt-agtgggagacaaaatgcaaataaatgca--aataaaaggagtgcaacgtgctgtaagaaacataaaccagggaaagggcagagagtgtggggcagtggggccagtctgaatggtaaggggagggctgtctgctcagctgtcatctgagaagcctggactgaaggggccacaggatcctctaatggacaagtccctgcaggcagaagaaacagctgtgcaaaggccccgaggcagcatcgagctctttcaggaagg i chlSab2.chr6 C 0 I 1 s canFam3.chr1 19896095 737 - 122678785 ------------TTGGGAAGGGGTGAGGACCCAATTCCCCCATGCATGACCTCAG---CACCTCACCCCTGGATCCCCTGGGTCACAGCCGCCCCATCTGGGAGCAGGTCAGGGTCT-GCAGCCCTGAGGGAGCTCAGGGGACTTTGCCACGACATACACCCC--GTTCTACCCCA-CAGATGCTGCTGTGCAAGACTCATGGCCTGAGGATGGGGTCAAGCTGGACCACTGGGTGAGACCCCCACTCCCATCCAGACCCCAGGGCCCTCTTGGTGCCAAACTTAATCCAATGCATGA-TTCTCTGTCTTCACACCACCCAGTCTCAGCTCTGTTCCACTGATGACCTCTCC--------------ACCCTTGGGCACCTGGGAC--------ATCCCGCTGT-----GACCTCTTGGCCCCTCCTCCAGGCTCTCCTTGCCTGGCTCCCCATCCATTGTCTGACT-TAGGGTTATTGGAGTGCATACCCAGATCTCAACAGGGTGCATGAAGAAGTGAATCACCCTAAGGTCTCTGGACCTCCTTCattcattcactcagcaaa-gataactgggagtccaatatttacctaa-tcccacttagtgttccaggtttagcagtgaacataattgacccccactgaacgagctctccttgtgggtgtcagacaatatgcaaggaagt-cacagcgtcctcgggtgcaaagtgtggctaaggaaataaaacaag--------------------------------------at-atgagagtag----------------------------------------------------------------caag-------------------------tgcaaaggtcctgaggcagcaacatggtacttcaggaaca i canFam3.chr1 C 0 C 0 e calJac3.chr22 45789733 125 + 49145316 I a score=398702.000000 s hg38.chr19_GL949753v2_alt 393924 212 + 796479 --ccgcgtgaggctgcagccaaatgggcaag-gtcagagtgaggagcagaggccagaaccacagggagggagcggccagaccCTCCACGGCCTTAGGGCGTCCCTG-AGATTCCGTCAGGAAAGGGATGTAATC-----------------GGATCACCCTGGGAACAGTGGGGAAAATTGACTCCAGGGAGTCAGGAGGATTCAAGGACAC-----CCCCCACCACTGTCTCTCTCC s panTro4.chr19 59586774 211 + 63644993 --cc-cgtgaggctgcagccaaatgggcaag-gtcagagtgaggagcagaggccagaaccacagggagggagcggccagaccCTCCACGGCCTTAGGGCGTCCCTG-AGATTCCATCAGGAAAGGGATGTAATC-----------------GGATCACCCTGGGAACAGTGGGGAAAATTGACTCCAGGGGGTCAGGGGGATTCAAGGACAC-----CCCCCACCACTGTCTCTCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56503355 212 + 60714840 --ccgcctgaggctgcagccaaatgggcaag-gtcagagtgaggaggaggggccagaaccacagggagggagcggccagaccCTCCACAGCCTTAGGGTGTCCCTG-AGATTCCATCAGGAAAGGAATGCCATC-----------------GGATCACCCTGGGAACAGTGAGGAAAATTGACTCCAGGGGGTCAGGGGGACTCAAGGACAC-----CCCCCACCACTGTCTCTCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103198006 211 - 106955855 --ccgcgtgatgctgcagccaaatgggcaag-gtcagagtgaggaggagaggccagaaccacagggagggagcggccagaccCTCCATGGCCTTA-GGCGTCCCTG-AGATTCCATGATGAAAGGGATGCAATT-----------------GGATCACCCTGGGAACAGTGAGGAAAATTGACTCCAGGGGGTCAGGGGGACTCAAGGACAC-----CCCCCACCACTGTCTGTCTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55571506 212 + 59248254 --gggcattaggctgcagccaaatgggcaag-gtcggagtgaggaggagaggccagaaccacagggagggagcggccagaccCTCCACGGCCTTCGGGCGTCCCTG-AGATTCCATCAGGAAAGAGATGTAATC-----------------AGATCATCCTGGGAACAGTGAAGAAAATTGACTCCAGGGGGTCAGGGAGACTCAAGGACAC-----CCCCCACCAGTGTCTTTCTCC i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47646580 212 + 51301725 --GGGCATTAGGCTGCAGTCAAATGGGCAAG-GTCAGAGTGAGGAGGAGAGGCCAGAACCACAGGGAGGGAGCGGCCAGACCCTACATGGCCTTAGGGCATCCCTG-AGATTCCATCAGGAAAGGGATGTAATC-----------------AGATCACCCTGGGAACAGTGAAGAAAATTGACTCCAGGGGGTCAGGGGGACTCAAGGACAC-----CCCCCACCAGTGTCTCTCTCC i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47332901 212 + 50890351 --aggcattaggctgcagccaaatgggcaag-gtcagagtgaggaggagaggccagaaccacagggagggagaggccagaccCTCCACGGCCTTAGGGCATCCCTG-AGATTCCATCAGGAAAGGGATGTAATC-----------------GGATCACCTTGGAAACAGTGAAGAAAATTGACTCCAGGAGATCAGGGGGATTCGAGGACAC-----CCCCCACCAGTGTCTTTCTCC i chlSab2.chr6 I 1 C 0 s canFam3.chr1 19896832 232 - 122678785 cgggtcatgtggcttgagccaaatgggcaagaaacagtgtcaggaatagaatc---agctgttttaagacagc-atcacatgctccaagg-ctcaggaagtccctgcagagtccagcaggaaagtgacctaatctacccgaaactttgaaagcattactctggccacagtgtgataaattgact-ggggggattgagtgggttcaaggagataaatATCCTTCTCACTGTCTGTCTGC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45789733 125 + 49145316 I e rheMac3.chr19 60472965 8 + 64156825 I a score=2758301.000000 s hg38.chr19_GL949753v2_alt 394136 1062 + 796479 AGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACAC------TCCAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGgacacaaaggacagacaggcagaagaggacagacagatggacaCTGAGGTGAGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACCCCCACCACGTTCCTTCCCTCTCACTCTCCCCCGCTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCACTAATCCAGGGGGGACCCAGACCCCACAAGCCATGGAGACTCA------GGACCCCA-GAAGGCATGGAAGCTGCCTCCAGTAGACATCACTGAACCCCAGCCAGCCCAGACCCCTGACACAGACCACTAGAAGATTCCGGGAACGT-TGGGAGTCACCTGATTCT----GCaaagataaataatatccctgcattatcaaaa-taaagtagcagacctctcaattcacaatgagttaactgat-----------aaaacaaaa----------------cagaagtcagacaatgttttaaattgaatgatcatgt-aaatattacacatcaaaCCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaaatagagaa-------------aaattaataaagtc-aaaa-tgtttattcttgaaaacattaatga--tacatgaatcttggccacaatgagaaaaataaaaatgaaaaaagagcaggcatccatttccat--acaggaacaaaataggaggcagcactacagaccctacacacagctttacagaggtgaaagaaaactgtcagcaattctatgctgacataacagaaaatgtagatgagatagatgaaatacgaaaaattacagtttacttaatgaacataaggataaatagaaaaactgaatcatcatacataaacatatataaaatgcattgatcctgtaatcaaaaa-tgttccc s panTro4.chr19 59586985 1061 + 63644993 AGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACAC------TCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGACAGATGGACACTCAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGACC-CCCCCACCCCCATCATGTTCCTTCCCTCTCATTCTCCCCCACTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCAAGTGTCTATGCCACTGTGGCCATCCACTAATCCAGGGGGGACCCAGACCCCACAAGCCATGGAGACTCA------GGACCCCA-GAAGGCATGGAAGCTGCCTCCAGTAGACATCACTGAACCCCAGCCAGCCCAGACCCCTGACACAGACCACTAGAAGATTGCGGGAACGT-TGGGAGTCACCTGATTCT----GCaaagataaataatatccctgcattatcaaaa-taaagtagcagacctctcaattcacaatgagttaactgat-----------aaaacaaaa----------------cagaagtcagacaatgttttaaattgaatgatcatgt-aaatattacacatcaaaCCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaaatagagaa-------------aaattaataaagtc-aaaa-tgtttattcttgaaaacattaatga--tacatgaatcttggccacaatgagaaaaataaaaatgaaaaaagagcaggcatccatttccat--acaggaacaaaatgggaggcagcactacagaccctacacacagctttacagaggtgaaagaaaactgtcagcaattctatgctgacataacagaaaatgtagatgagatagatgaaatgtgaaaaattacagtttacttaatgaacataaggataaatagaaaaactgaatcatcatacataaacatatataaaatgcattgatcctgtaatcaaaaa-tgttccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56503567 1061 + 60714840 AGCAGAGCCCACAGGAAGGAGACTCCCAGGCAGTGACACATGCCCCCGTGAAACAC------TCCAGACCTAGGAGAGAAATGGCCTCCCCTCCCTCCCCACTGTCTGAGGAATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGGCAGATGGGCACTTAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGGCCTCCCCCACCCCCACCACGTTCCTTCCCTCTCACTCTCCCCCACTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAACGGGAACCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGACCATCCACTAATCCAGGGGGGACCCAGACCCCACAAACTATGGAGACTCA------GGACCCCA-GAAGGCATGGAAGCTGCCTCCAGCAGACATCATTGAATCCCAGCCAGCTTAGACCCCTGAC-CAGACCACTAGAAGATTCTGGGAACTT-TGGGAGTCACCTGATTCT----GCaaagataaataatatccctgcattatcaaaa-taaagtagcagacttctcaattcacaatgagttaactgat-----------aaaacaaaa----------------cagaagtctgacaatgttttaaattgaatgatcatgt-aaatattacacatcaaaCAAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaaatagagaa-------------aaattaataaggca-aaaa-agtttattcttgaaaacattaatga--tacatgaatcttggccacaatgagaaaaataaaaataaacaaagagcaggcatccatttctgt--acaggaacaaaataagaggcagcactacagaccctacacacagctttacagaggtgaaagaaaactgtcagcaattctatgccaacataacagaaaacgcagatgagatagatgaaatatgaaaaattacagtttacttaatgaacataaggataaatagaaaaactgaatcatcatacataaacatatataaaatgcattgatcctgtaatcaaaaa-tgttccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103198217 1057 - 106955855 AACAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACAC------TCCAGACCTAGGAAAGAAATGGCCTCCCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGGCAGATGGACACTCAGGCTGATCCTTTCCTCTCCAGG-CCCCAGGCCTCCCCCACCCCCATCACGTTCCTTCCCTCTCACTCTCCCCCACTGCAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGATCTACGCCCAGCTGCACAGCTTGACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAACGGGAACCTCCAGCTGAGCCCAGTGTCTACGCCACTCTGGCCATCCACTAATCCAGGGGGGACCCAGACCCCACAAACCATGGAGACTGA------AGACCCCA-GAAGGCATGGAAGCTGCCTCCAGTAGACATCATTGAACCCCAGCCAGCCTAGACCCCTGACACAGACCACTAGAAGATTCCGGGAACTT-TGGGAGTCACCTGATTCT----GCaaagataaatagtatccctgcattatcaaaa-taaagtagcagacttctcaattcacaatgagttaactgat----------------gaaa----------------cagaagtcagacaatgttttaaattgaatgatcatgt-aaatattatacatcaaaCCAATGATATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATGAGGAGaaa------------------------caaaaaatagagaa-------------aaattaacaaagtcaaaaa-agtttatttttgaaaacattaatga--tacatgaatcttggccacaatgagaaaaataaaaataaaaaaagagcaggcatccatttccat--acaggaacaaaataggaggcagcactacagaccctacacacagctttacagcggtgaaacaaaactgtcagcaattctatgccgatgtaacagaaaatgcagatgagatagatgaaatatgaaaaattacagtttacttaatgaacataagaataaatagaaaaactgaatcatcatacataaacatatataaaatgcattgatcctgtaatcaaaaa-tgttccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60472973 1086 + 64156825 AGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCGGGTGAAACAC------TCCAGACCTAGGAGAGAAATGGCCTCCCCTCCCTCCCCACTGTCCGAGGAATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGCCCTCCCCTACCCCCATCACATTCCTTCCGTCTCACTCTCCCCCACTGCAGGCTGCTACATCTGAAGCCCCCCAGGATGTGACCTATGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCACCCCAGAAACGGGAACCTTCAGCTGAGCCCAGTGTCTACGCCACTCTGGCCATCCACTAATCCAGGGAGGACCCAGACCCCACAAACCACGGAGACTCA------GGACCCCA-GAAGGCATGGAAGTTGCCCCCAGTGGACATCATTGAACCCCAGCCAGCCTAGACCCCTAACAGAGACCACTAGAAGATTCTGGGAACTT-TGGGCTTCACCTGATTCT----GCAAAGATAAATAGTATCCCTGCATTATCAAAA-CAAAGTAGCAGACTTCTCAGTTCCCAATGAGTTAACTGATaaaaaaaaaaaacaaaaaaaaaacaaaaaaaaaaaccagaagtcagaaaatgttttaaattgaatgctcatgt-aaatattacacatcaaaCCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaactaaggaa-------------aaattaataaagtc-aaaa--gtctattcttgaaaacattaatga--tacatggaacttggccacaatgagaaaaataagaataaaaaaagagcaggcattcttctccat--acaggaacaaaacaggaggcagcactacagaccctacacacagctttataaaagtgaaagaaaactg--agcaattctatgccgacataacagaaaatgcagatgagatagatgaaatattcaaaattacagtttacttaatgaacataaggataaatagaaaaactgaatcatcatacataaacatatatcaaatgcattgatcctgtaataaaaaa-tgttccc i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55571718 1079 + 59248254 AGCAGAGGCCACATGATGAAGACCCCCAGGCAGTGACGTATGCCCGGGTGAAACAC------TCCGGACCTAGGAGAGAAATGGCCTCCCCTCCCTCCCCACTGTCCGAGGAATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGATGGACACTCAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGCCCTCCCCTACCCCCATCACATTCCTTCCCTCTCACTCTCCCCCACTGCAGGCTGCTACATCTGAAGCCCCCCAGGATGTGACCTATGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCACCCCAGAAACGGGAACCTTCAGCTGAGCCCAGTGTCTACGCCACTCTGGCCATCCACTAATCCAGGGAGGACCCAGACCCCACAAACCACGGAGACTCA------GGACCCCA-GAAGGCATGGAAGTTGCCCCCAGTGGACATCATTGAACCCCAGCCAGCCTAGACCCCTAACAGAGACCACTAGAAGATTCTGGGAACTT-TGGGCTTCACCTGATTCT----GCAAAGATAAATAGTATCCCTGCATTATCAAAA-CAAAGTAGCAGACTTCTCAGTTCCCAATGAGTTAACTGAT---aaaacaaaacaaaacaa----aacaaaacaaaCCAGGAGTCAGAAAATGTTTTAAATTGAATGCTCATGT-AAATATTACACATCAAACCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaactaaggaa-------------aaatcaataaagtc-aaaa--gtttattcttgaaaacattaatga--tacatggaacttggccacaatgagaaaaataagaataaaaaaagagcaggcactcttctccat--acaggaacaaaataggaggcagcactacagaccctacacacagctttataaaggtgaaagaaaactg--agcaattctatgccgacataacagaaaatgcagatgagatagatgaaatattcaaaattacagtttacttaatgaacataaggataaatagaaaaactgaatcatcatacataaacatatataaaatgcattgatcctgtaataaaaaa-tgttccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47646792 1069 + 51301725 AGCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACATATGCCCAGGTGAAACAC------TCCAGACCTAGGAGAGAAAtggcctctcctccctccccactgtccGAGGAATTCCTGGACACAAAGGACACACAGGCAGAAGAGGACAGGCAGATGGACACTCAGGCTGGTCCTTtcctctccaggcccccagccctcccctacccccatcacattccttccctctcactctcccccaCTGCAGGCTGCTACATCTGAAGTCCCCCAGGATGTGACCTATGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCACCCCAGAAACGGGAACCTTCAGCTGAGCCCAGTGTCTACGCCACTCTGGCCATCCACTAATCCAGGGAGGACCCAGACCCCACAAACCACGGAGACTCA------GGACCCCA-GAAGGCATGGAAGTTGCCCCCAGTGGACATCATTGAACCCCAGCCAGCCTAGACCTCTGACAGAGACCACTAGAAGATTCTGGGAACTT-TGGGCTTCACCTGATTCT----GCAAAGATAAATAGTATCCCTGCATTATCAAAA-TAACGTAGCAGACTTCTCAGTTCCCAATGAgttaactgattaaaaaaaaaaaaaaaaaaa-----------------agaagtcagaaaatgttttaaattgaatGCTCATGT-AAATATTACACATCAAACCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATGAggacaaa------------------------caaaaactaaggaa-------------aaattaataaagtc-aAAA--GTTTATTCTTGAAAACATTAATGA--TACATGGAACTTGGCcacaattagaaaaataagaataaaaaaagagcaGGCACCCTTTTCCAT--ACAGGAACAAAACAGGAGGCAGCACTACAGACCCTACACACAGCTTTACAAAGGTGAAAGAAAACTG--AGCAATTCTATGCCGACATAACAGAAAATGCAGATGAGATAgatgaaatattcaaaattacAGTTTACTtaatgaacataagaataaatagaaaaactgaatcatcatacataaatatatataaaatacattgatcctgtaataaaaaa-TGTTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47333113 1068 + 50890351 AGCACAGCCCACACAATGAAGACCCCCAGGCAGTGACGCATGCCCAGGTGAAACAC------TCCAGACCTAGGAGAGAAATGACCTCTCCTCCCTCCCCACTGTCCAAGGAATTCCTGGACACAAAGGACACACAGGCGGAAGAGGACAGGCAGATGGACACTCAGGCTGGTCCTTTCCTCTCCAGGCCCCCAGCCTTCTCCTACCCCCATCATGTTCCTTCCCTCTCACTCTCCCCCACTGCAGGCTGCTACATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCAGAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGAAACGGGAACCTTCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCACTAATCCAGGGAGGACCCAGACCCCACAAACCACGGAGACTCA------GGACCCCA-GAAGGCATGGAAGTTGCCCCCAGTGGACATCATTGAACCCCAGCCAGCCTAGATCCCTAACACAGACCACTAGAAGATTCTGGGAACTT-TGGGCTTCACCTGATTCT----GCAAAGATAAATAGTATCCCTGCATTATCAAAA-TAAAGTAGCAGACTTCTCAGTTCACAATGAGTTAACTGAT--Gaaaaaaaaaaaaaaaaa----------------CAGAAGTCAGAAAATGTTTTAAATTGAGTGATCATGT-AAATATTACACATCAAACCAATGACATGGGAAAATGGGAGC---------------------------------------------------TTCT-----------------------------------------AATgaggacaaa------------------------caaaaactaaggaa-------------aaattaataaagtc-aaaa--gtttattcttgaaaacattaatga--tacatggaacttggccacaatgagaaaaataagaataaaaaaagagcaggcacccttttccat--acaggaacaaaacaggaggcagcactacagaccctacacacaacttcacaaaggtgaaagaaaactg--agcaattctatgccaacataacagaaaatgcagatgagatagatgaaatattcaaaattacagtttacttaatgaacataaggataaatagaaaaattgaatcatcatacataaacatatataaaatgcattgatcctgtaataaaaaa-tgttccc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19897064 1170 - 122678785 AGCAGAACACACAGGATGAAGATCCCCAGGTAGTGACGTACGCCCAGGTGAGCCACTCAGTGTCAAGTCTCAAGTGGGTCCTGGCCACTCCTCTATCCTCCCTTTCAGGAGGATTACAGGACTCAGAGGACAGACAAGCAGAGGAAGATAGGTGGATGGACAGTCAGGTGGGCCCTGTCTTCTCTGATCACCCTGGCTTCCCCCCACCCCAACACCAACCTCCCCTCTCACTCTCCCCTGCTGCAGGCTACTGCATCTGACGCCCCCCCAGATGTGACCTACGCTCAGCTGAACCACTTGACCCTCAGACAGAAGACAAGTGCATCCTCTCCCTCCCAGTCAGAGGAGCCCCCAGCAGAGCCCAGTGTGTATGCTGCTCTGGCCATTCACTAGCCCAGAAAGGACCCAGACACCATACTCCAGGGAGAGGGACCACACGGACCCTAGGAAGGCACAGGACCTGCCCACAGTGGGTGCTA------CCTGGTTG---TGGACTTCTCATAGAGACCAGTTGGAACTCCTGGGGTCCTCTCAGAGTCACTCGATTCTTCCCTCAAAGA-------TACTCCCGCACtttggaaattaaagaaatggacttctcaataatccaggagtgaaatgag----------aaaaccaaaa----------------tggaaatgagagaatg-tttacactgaaggattatgtaaaacgttacacataaaacc--tgaaatgggaaattaagaaccaagaacaaaatgtttaggaaggaaaaagcctaaaaaaaatgaatgacatattctatcaaatcaagaatttagagaaagaatagcaaaagattccaaatgaaggtaaaggaggaaaataatgagaagagtagctaagaataaggacaaaaaatttttttaaatcaataaagcc-aaaaatgttcatttttgtgaacattgtttaattttataaatcttagcaacaaccactaagaaaagagatagaaaagggcgggcacatgtcgccattatcagga-------------caccatcac--atcctacaga---ctataaattgataacagaatattag-aacagttttattctgatatatgaaaaaatgtagatgaaaccgtcaaaatcctcaaaacagaagctaccaaaatg-----atggagaggtagaaaatgtgtgtcaccttatgt----gtatataaaatgcaatga-catgtgatcaaaaactgctccc i canFam3.chr1 C 0 I 17311 e calJac3.chr22 45789733 125 + 49145316 I a score=212774.000000 s hg38.chr19_GL949753v2_alt 395198 91 + 796479 acaaagtaaatgccacttcagcaaggtttgttggtggtt-ttttcaaactcttatgcactcatgaa------acacacag------------------------------acacacacacacacaaac s panTro4.chr19 59588046 91 + 63644993 acaaagtaaatgccacttcagcaaggtttgttggtggtt-ttttcaaactcttatgcactcatgaa------acacacag------------------------------acatacacacacacaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56504628 97 + 60714840 acaaagtaaatgccacttcaggaaggtttgttggtgggt-ttttcaaactcttatgcactcatgaaacacacacacacac------------------------------acacacacacacacaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103199274 85 - 106955855 acaaagtaaatgccacttcaggaaggtttgttggtggtt-ttttcaaactcttatgcactcatgaa------acacac------------------------------------acacacacacaaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60474059 121 + 64156825 gcaaagtaaatgccactttaggaagatttgttggtggtt-ttttcaaactcttatgcactcatgaa------acacacagacacacacacacacacacacacacacacacacacacacacacagaaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55572797 113 + 59248254 gcaaagtaaatgccacttcaggaagatttgttggtggtt-ttttcaaactcttatgcactcatgaa------acacacag--------acacacacacacacacacacacacacacacacacagaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47647861 109 + 51301725 GCAAAGTAAATGCCACTTCAGGAAGATTTGTTGGTGATT-TTTTCAAACTCTTATGCACTCatgaa------acacacag------------acacacacacacacacacacacacacacacagaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47334181 96 + 50890351 gcaaagtaaatgccacttcaggaagatttgttggtggtt-ttctcaaactc-tatgcactcatgaa------acacacag------------------------acacacacacacacacacggaaac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102978527 91 + 122678785 acaaagtgaac-tgagtctagaaaactccactggtgaatgcctccaaatactGATGCACTCATGAA------atatacac------------------------------acacacagacacatggac i canFam3.chr1 I 56548 T 15627 e calJac3.chr22 45789733 125 + 49145316 I a score=3317896.000000 s hg38.chr19_GL949753v2_alt 395289 1404 + 796479 ttgcataaattttccctgagaatattttgtatatatttacacaaatacatttgatcagactaggaacaagttgataccaaaacctgaaaaggaaactacagaatgggaaagtcatagaagatctctcacagaaatataaatcccttaacaaatattaacaagtaagattcatgtctctataaaatagacagtatatcatgaccacactggttttttgttatcctttgattttgtttatgaaaagcaaggatagcttaattttcaaaaactcaatcaatgtaattcagtattttaacaaaaggaatgaaaaattatcatctcaatagacaaagcttttgtctgagcaccttttcatatagctgctgaccatttgtatgtcttcttttgagaaatgcctgttcagctactttgcccatgtttcaagtagtttttggtttcttgctgttgctttgttttagttccttacatatttttgcatattaaccctttatcaggtatacagcttgcaactattttctcccatttctgagttgtctcttcattc---tgtt-----tgcagaagctgt----ttagaagccacaccttttgtctatttttgcttttgttgcttgtgttttcagggccatatccaaaaaaaccttgcccggaccaacgtcttgaagcttttctcccacccatttttgtatatgggataagggttcaatttcattcttcttcatatgaatatccccaggatgtgtcctatgcccagctgcacagctt-accctcaaacagaaaataatgaagccttcttcctcccaggaaaggggacgttcagctgagccgagtgtgtatactgctctggccatccactagcccagggaggacccagacctccacactccatggagactcagttctcctaggaccatttattcaaaaggactgccctctcttgttcttggaaactttgttgaggatcaattcaccataaatatgtgtgtttccttctttgctttcatccctgttgcactgatcactgtacctgtttctattccagttccatgatgtcttcctggctgtagctttgtaggatatttggggattccatagtgtgatat-ccccttcttccctttgctcaagattgttttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatttctgtggaaaacgaccttggaattttgttaggaattgcattgagtctgcaggtatgaacttttttttaaagttccagggcacatgtacaggacctgcagctttgttacataggtaggcttgtgccatggtggtttgctgcacctatcaacccattacctagttattaagcccagcatgcattagctctttttcctgatgctctccctcccttcatcatccgccct-ccc s panTro4.chr19 59588137 1407 + 63644993 ttgcataaattttccctgagaatattttgtatatatttacacaaatacatttgatcagactaggaacaagttgataccaaaacctgacaaggaaactacagaatgggaaagtcatagaagatctctcacagaaatataaatcacttaacaaatattaacaagtaagattcatgtctctataaaataggcagtatatcatgaccacactggttttttattatcctttaattttgtttatgaaaagcaaggatagcttaattttcaaaaactcaatcaatgtaattcagtattttaacaaaaggaatgaaaaattatcatctcaaaagacaaagcttttgTCtgagcaccttttcatatagctgctgaccatttgtatgtcttcttttgagaaatgcctgttcagctactttgcccatgtttcaagtagtttttggtttcttgctgttgcgttgttttagttccttacatatttttgcatattaaccctttatcaggtatacagcttgcaactattttctcccatttctgagttgtctcttcattctgttgtt-----tgcagaagctgt----ttagaagccacacgttttgtctatttttgcttttgttgcttgtgttttcagggccatatcc-aaaaaaccttgcccagaccaacgtcttgaagcttttctcccacccatttttgtatatgggataagggttcaatttcattcttcttcatatgaatatccccaggatgtgtcctatgcccagctgcacagctt-accctcaaacagaaaataatgaagccttcttcctcccaggaaaggggacgttcagctgagccgagcgtgtatactgctctggccatccactagcccagggaggacccagacctccacactccatggagactcagttctcctaggaccatttattcaaaaggactgccctctcttgttcttggaaactttgttgcggatcaattcaccgtaaatgtgtgtgtttccttctttgctttcatccctgttgcactgatcactgaacctgtttctattccagttccatgatgtcttcctggctgtagctttgtaggatatttggggattccatagtgtgatatcccccttcttccctttgctcaagattgctttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatttctgtggaaaacgaccttggaattttgttaggaattgcattgagtctgcaggtatgaacttttttttaaagttccagggcacatgtacaggacctgcagctttgttacataggtaggcttgtgccatggtggtttgctgcacctatcaacccattacctagttattaagcccagcatgcattagctctttttcctaatgctctccctcccttcatcctctgccct-ccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56504725 1405 + 60714840 ttgcataaattttccctgagaatattttgtatatatttacacaaatacattttatcagactaggaacaagttgatacccaaacctgacaaggaaactacaaaatgggaaagtcatagaagatctctcacagaaatataaatcccttaacaaatattaacaagtaagattcatgtctctataaaatagacagtatatcatgaccacactggttttttattatcttttaattttgtttatgaaaa-caaggatagcttaattttcaaaaactcaatcaatgtaattcaatattttaacaaaatgaacaaaaaattatcatctcaatagacaaagcttttgTCtgagcaccttttcatatagctgctga-catttgtatgtcttcttttgagaaatgcctgttcagctcctttgcccatg-ttcaagtagtttttggtttcttgctgttgcattgttttagttccttacatatttttgaatattaaccctttatcaggtatacagcttgcaactattttctcccatttctgagttgtctcttcattctgttgtt-----tgccgaagctgt----ttagaagccacacctttcgtctatttttgcttttgttgcttgtgttttcagggccatatcc-aaaaaaccttgcccagaccaacgtcttgaaggttttctcccacccgtttttgtatatgggataagggttcaatttcattcttcttcttatgaatatccccaggatgtgtcctatgcccagctgcacagcttgaccctcaaacagaaaataatgaagcctccttcctcccaggaaaggggacgttcagctgagcagagggtgtatgctgctctggccatccactagcccagggaggacccagacctccacactacatggagactcagttctcccaggaccatttattcaaaaggactgccctctcttgttcttggaaactttgttgaggatcagttcaccataaatgtgtatgtttcattctttgctttcatctctgttaaactgatcactgtacctgtttctatgccagttccatgctgtcttccttgctgtagctttgtaggatatttggggattccatagtgtgatat-cccctttttcccttttttcaagattgttttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatttctgtggaaaatgaccttggaattttgataggcattgcattgagtctgcagatatgaactttttttttaagttccagggcacatgtataggaactgcagagttgttacataggtaggcatatgccatggtggtttgctgcacctgtcaacccattacctaggtattaagtccagcatgcattagctcttttccctaatgctctccctcccttcatcctccaccctcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103199359 1409 - 106955855 ttgcataaattttccctgagaatattttgtatatctttatgcaaatatgttttatcagactaggaacaagttgatacccaaacctgacaaggaaactacaaaatgggaaagtcatagaagatctctcacagaaatataaatccctgaacaaatattaacaagtaagattcatgtctctataaaatagacaa-atatcatgactacactggttttttattatcttttaattttgtttatgaaaagcaaggatagcttaattttcaaaaactcaatcaaggtaatccaatattttaacaaaataaacaaaaaattatcatctcgatagacaaagcttttgTCtgagcaccttttcatatacctgctgaccatttgtatgtcttcttttgagaaatgcctgttcagctcctttacccatgtttcaagtagtttttggtttcttgctgttgcgttgctttagttgcttacatatttttgaatattaaccctttatcaggtatacagcttgcaactattttctcccatttctgagttgtctcttcattctgttgtt-----tgcagaagctgtttagttagaagccacactctttgtctatttttgcttttgttgcttgtgttttcagggccatatcc-aaaaagccttgcccagaccaacgtcttgaaagttttctcccacccatttttgtatatgggataagggttcaatttcattcttcttcatatgaatatccccaggatgtgtcctatgcccagctgcacagcttgaccctcaaacaggaaataatgaagcctccttcctcccaggaaagggaacgctcagctgagctgagcatgtatgctgctctggccatccactagcccagggaggacccagacccccacactccatggagactcacttctctcaggaccatttactcaaaaggactgccctctcttgttcttggaaactttgttgaggatcaattcaccataaatgtgtgtgtttcattctttgctttcatctctgttgcactgatcactgtacctgcttctatgccagttccatgctgtcttccttgctgtagctttgtaggatatttggggattccatagtgtgatac-cccctctttccctttgctcaagattgttttggctattaggggtccttttgtagtcccattcaaattttaggattgtttttctatatctctggaagacgaccttggaattttgataggaattccattgagtctgcaggtatgaactttttttt-aagttccagggcacatgtacaggacccgcagatttgttacataggaaggcatatgccatggtggtttgctgcacctatcaatctattacctaggtattaagcccagcatgcattagctcttttccctaatgctctccctcccttcatcctccgccct-ccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60474180 1409 + 64156825 ttgcataaattttccctgagaatattttgtgtatatttacacaaatacattttatcagactaggaacaagttgatacccaaacctgacaaggaaactacaaaatgggaaagtcatggatgatctctcaccgaaatataaatcccttaacaaatattaac----aagattcatttctctataaaatagacaatatatcatgaccacactggttttttattattttttaattttgtttatgaaaagcaagggtagcttaattttcaaaaactcaatcaatgtaattcagtattttaacaaaatgaacaaaaagttattatctcaacagacaaagcttttgTCtgagcaccttttcatatacctgctgaccatttgtatgtcttcttttgagaaatgcctgttcagctcctttgcccgtgtttcaagtagtttttggtttcttgctgttgcattgttttagttccttatatatttttaaatattaaccctttatcagacatacagcttgcaactatttcctcccatttctgagttgtctcttcattctgttgtttgctgtgcagaagctgtttcgttaggaggcacaccctttgtctacttttgcttttgttgcttgtgttttcagggccatatcc-aaaaaactttgcctagaccaacgtcttgaagcttttctctcacccatttttgtacatgggataatggttcaatttcattcttcttcatatgaatatccccaggatgtgacctatgcccagctgcacaacttaaccctcaaacaggaaataatgaagcctccttcctcccaggaaagggaaagtacagctgagctgagcgtatacgctgctctggccatccactagcccagggaggacccagacctccacactccatggagactaagttctcccaggaccatttattcagaaggactgccctctcttgttcttggaaactttgttgagcatcaattcaccataaatgtgtgtgtttcattctttgctttcacccttgttgcactgatcactgtacctgtttctatgtcagttccatgctgtcttccttgctgtggctttgtaggatatttggggattccaaagtgtgatac-cccctttttccctttgctcaagattgttttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatgtctgtggaaaatgaccttggaattttgataggaattgcattgagtctgcaggtataaac-ttttttt-aagtcccagggcacatgtacaggacaggtaggtttattacataggtaggcatgtgccatggtggtttgctgcacctatcaacccattacctaggtattaagcctgacatgca-aaactctttttcctaatgctctccctcccttcatcatctgccct-ccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55572910 1410 + 59248254 ttgcataaattttccctgagaatattttgtgtatatttacacaaatacattttatcagactaggaacaagttgatacccaaacctgacaaggaaactacaaaatgggaaagtcatggatgatctctcaccgaaatataaatcccttaacaaatattaac----aagattcatgtctctataaaatagacaatatatcatgaccacactggttttttattattttttaattttgtttatgaaaagcaagggtagcttaattttcaaaaactcaatcaatgtaattcagtattttaacaaaatgaacaaaaagttattatctcaacagacaaagcttttgTCtgagcaccttttcatatacctgctgaccatttgtatgtcttcttttgagaaatgcctgttcagctcctttgcccgtgtttcaagtagtttttggtttcttgctgttgcattgttttagttccttatatatttttaaatattaaccctttatcagacatacagcttgcaactatttcctcccatttctgagttgtctcttcattctgttgtttgctgtgcagaagctgtttcgttaggaggcacaccctttgtctacttttgcttttgttgcttgtgttttcagggccatatcc-aaaaaactttgcctagaccaacgtcttgaagcttttctctcacccatttttgtacatgggataatggttcaatttcattcttcttcatatgaatatccCCAGGATGTGACCTATGCCCAGCTGCACAACTTAACCCTCAAACAGGAAATAATGAAGCCTCCTTCCTCCTAGGAAAGGGAAAGTACAGCTGAGCTGAGCGTATACGCTGCTCTGGCCATCCACTAGCCCAGGGAGGACCCAGACCTCCACACTCCAtggagactaagttctcccaggaccatttattcagaaggactgccctctcttgttcttggaaactttgttgagcatcaattcaccataaatgtgtgtgtttcattctttgctttcatccttgttgcactgatcactgtacctgtttctatgtcagttccatgctgtcttccttgctgtggctttgtaggatatttggggattccaaagtgtgatac-cccctttttccctttgctcaagattgttttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatgtctgtggaaaatgaccttggaattttgataggaattgcattgagtctgcaggtataaactttttttt-aagtcccagggcacatgtacaggacaggtaggtttattacataggtaggcatgtgccatggtggtttgctgcacctatcaacccattacctaggtattaagcctgacatgca-aaactctttttcctaatgctctccctcccttcatcatctgccct-ccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47647970 1407 + 51301725 ttgCATAAATTTTCCCTGagaatattttgtgtatatttacacaaatacattttatcaGACTAGGAACAAGTTGATACCCAAACCTGACAAGGAAACTACAAAATGGGAAAGTCATGGATGATCTCTCACCGAAATATAAATCCCTTAACAAACATT-------AAGATTCATGTCTCTATAAAATAGACAATATATCATGACCACActggttttttattattttttaattttgtttatgaaaaGCAAGGGTAGCTTAATTTTCAAAAactcaatcaatgtaattcagtattttaacaaaatgaacaaaaagttaTTATCTCAACAGACAAAGCTTTTgtctgagcaccttttcatatacctgctgaccacttgtatgtcttcttttgagaaatgcctgttcagcTCCTTTGCCCGTGTTTCAAGTAGTTTTTGGTTTCTTGCTGTTGTGTTGTtttagttccttatatatttttaaatattaaccctttatcagagaTACAGcttgcaactattttctcccatttctgagttgtctcttcattctgttgtttgctgtgcagaagctgtttagttagAAGGCACAccctttgtctacttttgcttttgttgcttgtgttttcaGGGCCATATCC-AAAAAACTTTGCCTAGACCAACGTCTTGAAGCTTTTCTCTCACCCATTTTTGTACATGGGATAAtggttcaatttcattctttttcatatgaATATCCCCAGGATGTGACCTATGCCTAGCTGCACAACTTAATCCTCAAACAGGAAATAATGAAGCCTCCTTCCTCCCAGGAAAGGGAAAGTTCAGCTGAGCTGAGCGTATACGCTGCTGTGGCCATCCACTAACCCAGGGAGGACCCAGACCTCCACACTCCATGGAGACTAAGTtctcccaggaccatttattcaGAAGGACTGCCCTCTCTTGTTCTTGGAAACTTTGTTGAGCATCAATTCaccataaatgtgtgtgtttcattCTTTGCTTTCATCCTTGTTGCACTGATCACTGTACCTGTTTCTATGTCAGTTCCATGCTGTCTTCCTTGCTGTGGCTTTGTAGGATATTTGGGGATTCCAAAGTGTGATAC-CCCCTTTTTCCCtttgctcaagattgttttggctatttggggtccttTTCTAGTCCCattcaaattttaggattgtttttctatgtCTGTGGAAAATGAccttggaattttgataggaattgcattgagtcTGCAggtataaactttttttt-aagtcccAGGGCACATGTATAGGACaggcaggtttattacatagataggcatgtgccatggtggtttgctacacctatcaacccattactTAGGTATTAAGCCCGACATGCA-TAActctttttcctaatgctctctctcccttcatcctctgccct-ccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47334277 1410 + 50890351 ttgcttaaattttccctgagaatattctgtgtatatttacacaaatacattttatcagactaggaacaagttgatacccaaacctgacacggaaactacaaaatgggaaagtcatggatgatctctcacaaaaatataaatcccttaacaaatattaaccagtaagattcatatctctataaaatagacaatatatcatgatcacactggttttttattattttttaattttgtttatgaaaagcaagggtagcttaattttcaaaaac----tcaatgtaattcagtattttaacaaaatgaacaaaaaattattatctcaacagacaaagcttttgTCtgagcaccttttcatatacctgctgactatttgtatgtcttcttttgagaaatgcctgttcagctcctttgcccgtgtttcaagtagtttttggtttcttactgttgtgtcgttttagttcctcatatatttttaaatattaaccctttatcagatacacagcttgcaacgattttctcccatttctgagttgtctcttcattctgttgtttgctgtgcagaagctgtttagttagaaggcacaccctttgtctacttttgcttttgttgcttgtgttttcagggccatatcc-aaaaaactttgcctagaccaacgtcttgaagcttttctctcacccatttttgtacatgggataatggttcaatttcattcctcttcatatgaatatccCCAGGATGTGACCTATGCCTAGCTGCACAACTTAACCCTCAAACAGGAAATAATGAAGCCTCCTTCCTCCCAGGAAAGGGAAAGTTCAGCTGAGCTGAGCTTATACACTGCACTGGCTATCCACTAGCCCAGGGAGGACCCAGACCTCCACACTCCAtggagactaagttctcccaggaccatttattcagaagcactgccctctcttgttcttggaaactttgttgaggatcaattcaccataattgtgtgtgtttcattctttgctttcatccttgttgcactgatcactgtacctgtttctatgtcagttccatgctgtcttccttgctgtggctttgtaggatatttagggattccaaagtgtgatac-cccatttttccctttgctcaagattgttttggctatttggggtccttttgtagtcccattcaaattttaggattgtttttctatgtctgtggaaaatgaccttggaattttgataggaattgcattgagtctgcaggtATAaactttttttt-aagtcccagggcacatgtacaggacaggcaggtttattacataggtaggcatgtaccatggtggtttgctgcacctatcaacccattacctaggtattaagcctgacatgca-aaactctttttcctaatgctctccctcccttcatcctctgccct-ccc i chlSab2.chr6 C 0 I 5525 e canFam3.chr1 102978618 15627 + 122678785 T e calJac3.chr22 45789733 125 + 49145316 I a score=725951.000000 s hg38.chr19_GL949753v2_alt 396693 419 + 796479 actacaagccccagtgtgtgttgttcccctccctgtgtccatgtgttctcattgttatacgaacattttaacaatgttaattcttgcagaccatgaacataagctaccttcccatttatatgcgtcttgttcaatttcattcatcaatgttataaagattttagtgcagagatattaaacctccttggttaaatttaattctaagtaattttttagctattataagtgtaatttttctttcgatttctttctggatagtttgtttttagtatatagagatgctaccaatttctgcatgttgattttgtatcctgcaactctactaaattcgtggatcagttctaaaagttgtttggttgagtcttt-------------------------aga-gatttttatatataaaatcatgtcagcaaacagagacaatatcacttttt s panTro4.chr19 59589544 419 + 63644993 actacaagccccagtgtgtgttgttcccctccctctgtccatgtgttctcattgttatatgaacattttaacaatgttaattcttgcagaccatgaacataagccaccttcccatttatatgcgtcttgttcaatttcattcatcaatgttataaagattttagtgcagagatattaaacctccttgggtaaatttaattctaagtaattttttagctattataagtgtaatttttcttttgatttctttctggatagtttgtttttagtatatagagatgctaccaatttctgcatgttgattttgtatcctgcaactctactaaattcgtggatcagttctaaaagttgtttggttgagtcttt-------------------------aca-gatttttatatataaaatcatgtcagcaaacagagacaatatcacttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56506130 440 + 60714840 acaacaggccccagtgtgtgttgttcccctccctgtg--catgtattctcattgtaatgtgaacattttaacagtgttaattcttgcagaccatgaacataagctaccttcccatttatatgggtcttgttcaatttcattcatcaatgttataaagattttagtgcagagatattcaacctccttggttaaatttaattctaagtaattttttagctattataagtgtaatttttcttttgatttctttctggatagtttgttttcagtgtatagagatgctaccgatttttgcatgtcgattttttatcctg---ctctactaaattcatggatcagttctaaaagttgtttggttgagtctttccctaaagactgattttccctaaagacatgatttttatacataaaatcatgtcagcaaacagagacaatatcacttttt i ponAbe2.chr19 C 0 I 211 s nomLeu3.chr10 103200768 419 - 106955855 ctgacaggccccagtgtgtgttgttctcctccctgtgtccatgtgttctcattgtaatatgaacattttaacaatgttaattcttgcagaccatgaacataagctaccttcctatttatatgggtcttgttcaatttcattcatcaatgttgtaaagattttagtgcagagatattcaacctccttggttaaatttaattctaagtaattttgtagctattgtaagtgtaatttttcttttgatttctttcaggatagtttgtttttagtacatagagatgctaccgatttttgcatgttgattttgtatcctgcagctctactaaattcttggatcagttctaaaagttgttgggttgagtcttt-------------------------agg-gatttttatatataaaatcatgtcagcaaacagagacaatatcacttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60475589 416 + 64156825 ctcacaggccccagtgtgtgttgttcccctccctgtgtccatatgttcttattgtaatatgaacattttaacaatgttaactcttgcagaccatgaacataagctaccttcccatttatatgggtcttgttcaatttcattcatcaatgttgtaaagattttagtacagagatattcaacctccttggttaaatttaattctaagtaattttttagctattataagtgtaatttttcttttgatttctttctggatagtttgtttttagtgtacagagatgctacctagttttgcatgttgattttgtatcctg---ctctactaaattcatggatcagttctaaaagttgtttggttgagtcttt-------------------------agg-gacttttatatataaaatcatggcagcaagtggagacaatatcactttct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55574320 416 + 59248254 ctcacaggccccagtgtgtgttgttcccctccctgtgtccatatgttcttattgtaatatgaacattttaacaatgttaactcttgcagaccatgaacataagctaccttcccatttatatgggtcttgttcaatttcattcatcaatgttgtaaagattttagtacagagatattcaacctccttggttaaatttaattctaagtaattttttagctattataagtgtaatttttcttttgatttctttctggatagtttgtttttagtgtacagagatgctacctagttttgcatgttgattttgtatcctg---ctctactaaattcatggatcagttctaaaagttgtttggttgagtcttt-------------------------agg-gacttttatatataaaatcatggcagcaagtggagacaatatcactttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47649377 414 + 51301725 ctcaaaggccccagtgtgtgttgttcccctccctgtgtccatgtgttcttattgtaaTGTGAAcgttttaacaatgttaattcttgCAGACCATGAACATAAGCTACCTTCCCATTTATGTGGGTCTTGTTCAATTTCATTCATCAATGTTGTAAAGATTTTAGTACAGAGATATTcaacctccttggttaaatttaattctaagtaattttttagctattataagtgtaattttttttt--atttctttctggatAGTTTGTTTTTAGTGTACGGAGATGCTACCGagttttgcatgttgattttgtaacctg---ctCTACTAAATTCATGGATCAGTTCTAAAGGTTGTTTGGTTGAGTCTTT-------------------------Agg-gatttttatatataaaatcatggcAGCAAACGGAGACAATGTCACTTTCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102978618 15627 + 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=862964.000000 s hg38.chr19_GL949753v2_alt 397112 477 + 796479 atctgatttgggtgcttttgtgtatttttattgcctaattgctgtgtctaggacttctattactatgctgaatagaagaagtgagagCATATACTTTTGAGCAAGGATTCTTCCATCCTCCTCCTACAGAAAGGGCAGGTTCTAATTGCACTCTGGCTGAACTATTAGCACTTCTCATGCACTTGTGTGCTCAGCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGGCACCAGATGTATTTGCTGCTAAGTCCTGGCCACAGACAGTGGATGACAGATGATTATTTAAATAAAGATTAGCTTTCCTTTCAAAGTTGGAGTGCTAACCCACCCAATGTCCCTAAGGCTTCAGGGCAGGACCATGGAAAGAGGAGGAGGAAGGTTCTGAG-AACTAGACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGTGCTGTATCCAGGGAGATGTGGAGGAGACTGTTAGAAAATA s panTro4.chr19 59589963 477 + 63644993 atctgacttgcgtgcttttgtgtatttttattgcctaattgctgtgtctaggacttctattactatgctgaatagaagaagtgagagCATATACTTTTGAGCAAGGATTCTTCCATCCTCCTCCTGCAGAAAGGACAGGTTCTAATTGCACTCTGGCTGAACTCCTAGCACTTCTCATGCACTTGTGTGCTCACCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGCCACCAGTTGTATTTGCTGCTAAGTCCTGGCCACAGACAGTGGATGACAGATGATTATTTAAATAAAGATTAGCTTTCCTTTCAAAGTTGGAGTGCTAACCCACCCAATGTCCCTAAGGCTTCAGGGCAGGACCATGGAAAGAGGAGGAGGGAGGTTCTGAG-AACTAGGCAAGGGGCACTGAGGAGGCAGAAATGAATCAAGTGCTGTATCCAGGGAGATGTGGAGGAGACTGTTAGAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56506781 477 + 60714840 AtctgatttaggtgcttttgtgtatttttattgcctaattgctgtgtctaggacttctattactgtgctgaatagcaggcatgagagcatatacttttgAGCAAGGATTCTTCCATCCTCCTCCTTCAGAAAGCACAGGTTCTAATTGCACTCTGGCTGAACTCCTAGCACCTCTCATGCACTTGTGTGCTCAGCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGGCACCAGGTGTATTTGCTGCTAAGTCCTGGCCACAGACAGCAGATGACAGATGATTATTTAAATAAAGATTAGCTTTCCTTTCAAAGTTGGAGTGCTAACCCACCCGCTGTCCCTAAGGCTTCAGGGCAGGACCATGGAAAGAGGAGGAGGAAGGTTCTGAG-AACTAGACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGGTCTGTATCCAGGGAGATGTGGAGGAGACTGTTAGAAAATA i ponAbe2.chr19 I 211 C 0 s nomLeu3.chr10 103201187 476 - 106955855 atctgatttgggtgcttttgtgtatttttattacctaattgctgtgtctaggacttctattactatgctgaatagaaggagtgagagCATATACTTTTGAGCAAGGATTCTTCCGTCCTCCTCCTTCAGAAAGGACA-GTTCTAATTGCACTCTGGCTGAACTCCTAGCACTTCTCACACACGTGTGTGCTCAGCCTTCAGTCAGCCTCATTGAAAAGGGTCCAACTGAGGAAGGCACCAGGTGTATTTGCTGCTAAGTCCTGGCCACAGACAGTGGATGACAGATGATTATTTAAATGAAGATTAGCTTTCCTTTCAAAGTTGAAGTGCTAACCCACCCACTGTCCCTCAGGCTTCAGGGCAGGACCATGGAAAGAGGAGGAGGAAGGTTCTGAG-AACTAGACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGGGCTGTTTCCAGGCAGATGTGGAGGAGACTGTTAGAAAATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60476005 476 + 64156825 atctgatttgggtgc-cttgtgtatttttattgcctaattgctgtgtctaggacttctattattatgctgaagagaaggggcgagagCATATACTTTTGAGCAAGGATTCTTCCGTCCTCCTCCTTCAGAAAGGACAGGTTCTAAGTGCACTCTGGCTGAACTCCTAGGACTTCTCACACACCTGTGTGCTCAGCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGGCACCAGGTGTATTTGCTGCTAAGTCCTGGCCACAGGCAATGGATGACAGATGATTATTTAAATAAAGATTGGCCTTCCTTTCAAAGTTGGAGTGCTAACCCACCCACTGTCCCTAAGGCTTGAGGGCAGGACCATGGAAAGAGGAGGAGGAAGGTTCTGAG-AACTAGACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGGGCCGTTTCTAGGGAGATGTGGAGGAGACTGTTAGAAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55574736 476 + 59248254 atctgatttgggtgc-cttgtgtatttttattgcctaattgctgtgtctaggacttctattattatgctgaagagaaggggcgagagCATATACTTTTGAGCAAGGATTCTTCCGTCCTCCTCCTTCAGAAAGGACAGGTTCTAAGTGCACTCTGGCTGAACTCCTAGGACTTCTCACGCACCTGTGTGCTCAGCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGGCACCAGGTGTATTTGCTGCTAAGTCCTGGCCACAGGCAATGGATGACAGATGATTATTTAAATAAAGATTGGCCTTCCTTTCAAAGTTGGAGTGCTAACACACCCACTGTCCCTAAGGCTTGAGGGCAGGACCATGGAAAGAGGAGGAGGAAGGTTCTGAG-AACTAGACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGGGCCGTTTCTAGGTAGATGTGGAGGAGACTGTTAGAAAATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47649791 477 + 51301725 ATCTGATTTGGgtgc-tttgtgtatttttattgccTAATTGCTGTGTCTAGGACTTCTATCACTATGCTGAAGAGAAGGGGCGAGAGCATATACTTTTGAGGAAGGATTCTTCCGTCCTCCTCCTTCAGAAAGGACAGGTTCTAACTGCACTCTGGCTGAACTCCTAGGACTTCTCAAGCACATGTGTGCTCAGCCCTCAGTCAGCCTCATTGGAAAGGGTCCAACTGAGGAAGGCACCAGGGGTATTTGCTGCTAAGTCCTGGCCACGGGCAATGGATGACAgatgattatttaaataaagattaGCCTTCCTTTCAAAGTTGGAGTGCTAACCCACCCACTGTCTCTAAGGCTTGAGGGCAGGACCatggaaagaggaggaggaaggttctgagaaactagACAAGGGGCACTGAGGAGGCAGAAATGAATCAAGGGCCGTTTCTAGGGAGATGTGGAGGAGACTGttagaaaata i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102978618 15627 + 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=201198.000000 s hg38.chr19_GL949753v2_alt 397589 100 + 796479 GTAACAAAAAAAGGGAAGCCCAAGCAGAGAATTGTTTGGTAGAAAGAATACCCACGACCCAGGGTCAGTGGAGGAGTTATGTTTTCTTCCCCTATTTCCC s panTro4.chr19 59590440 100 + 63644993 GTAACAAAAAAAGGGAAGCCCAAGCAGAGAATTGTTTGGTAGAAAGAACACCCATGACCCAGGGTCAGTGCAGGAGTTATGTTTTCTTCCCCTATTTCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507258 100 + 60714840 GTAACAAGAAAAGGGAAGCCCAAGCAGAGAAGTGTTTGGTAGAAAGAACACCCACGACCCAGGGTCAGTGGAGGAGTTATGTTTTCTTCCCCTATTTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103201663 100 - 106955855 GTAACAAAAAAAGGGAAGCCCAAGCAGAGAATTGTTTGGTAGAAAGAACACCCACGACCCAGGGTCAGTGGAGGAGTTATGTTTTCTTCCCCTATTTCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60476481 100 + 64156825 GTAATAAAACAAGGGAAGCCCAAGCAGAGAATTGTTTAATAGAAAGAACACCCACAATCCAGGGTCAGTGAAGCAGATCTGCTTTCTTCCCCTATTTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575212 100 + 59248254 GTAATAAAACAAGGGAAGCCCAAGCAGAGAATTGTTTAGTAGAAAGAACACCCACAATCCAGGGTCAGTGAAGGAGATCTGCTTTCTTCCCCTATTTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650268 100 + 51301725 gtaacaaaacaAGGGAAGCCCAAGCAGAGAATTGTTTGGTAGAAAGAATACTCACAACCCAGGGTCAGTGGAGGAGATCTGCTTTCTTCCCCTATTTCCC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 102962991 100 + 122678785 GCAAGAATAAAAGAGAACTCCATAAAGGGGGCTCTTAGGTAGGAAGAAGACCCGCCATCAGGGGCCAGGAGAAGAGTCATATTTTCTTACCACATTTCTC i canFam3.chr1 T 15627 T 32183 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=24513.000000 s hg38.chr19_GL949753v2_alt 397689 13 + 796479 TGCATTTCTGCAC s panTro4.chr19 59590540 13 + 63644993 TGCACTTCTGCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507358 13 + 60714840 TGCATTTCTGCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103201763 13 - 106955855 TGCATTTCTGCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60476581 13 + 64156825 TGCATTTCTGCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575312 13 + 59248254 TGCATTTCTGCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650368 13 + 51301725 CGCATTTCTGCAC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102963091 32183 + 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=926642.000000 s hg38.chr19_GL949753v2_alt 397702 460 + 796479 TATGCACAGTGATATCGCTGTCACTTTCTCAGCCCTGCAGGCTTGTCAGAACCCAGTGACCGCCTGGAACTGGTGGTGACAGATGAGAGGACACTCAGGGATCCCAGCCCCAGGCACTGCATTCAGGAAGGGGTTCAGCTCTCAGGGGGTGTCTCCCTTCTCACAGCCCAGCCCTGGGGTATGATGTGGAA-GGTGTGAGCCCCATTTAACATGGTGCTTCCTTCTGTCCTAGGATTCTACAGCAAATCCACCCTCTCAGCTCAGCCCAGCCCTGTCCTGACCTCAGGAGGTAAGGTGACACCATTATGTCCTTCACGGCTGGGATTTGACAGGTTCATTCTGACCGTGGAAGGTGAACACAAGCTATTCTGTCTCCTGGACCCCGAAAAACAGTCCGAT-GGACAGTTCCAAGCCCTGATCCTGGCAGACCCCATGACTTCTAGCCACAGGTGGAGGTTTA s panTro4.chr19 59590553 459 + 63644993 TATGCACAGTGATATCGCTGTCACTTTCTCAGCCCTGCAGGCTTGTCAGAACCCAGTGACCGCCTGGAACTGGTGGTGACAGACGAGAGGACACTCAGGGGTCCCAGCCCCAGGCACTGCATTCAGGAAGGGGTTCGGCTCTCA-GGGGTGTCTCCCTTCTCACAGCCCAGCCCTGGGGGATGATGTGGAA-GGTGTGAGCCCCATTTAACATGGTGCTTCCTTCTCTCCTAGGATTCTACAGCAAATCCACCCTCTCAGCTCAGCCCAGCCCTGTCCTGACCTCAGGAGGTAAGGTGACCCCATTATGTCCTTCACGGCTGGGATTTGACAGGTTCATTCTGACTGTGGAAGGTGAACACAAGCTATTCTGTCTCCTGGACCCCGAAAAACAGTCCAAT-GGACAGTTCCAAGCCCTGATCCTAGCAGACCCCATGATTTCTAGCCACAGGTGGAGGTTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507371 459 + 60714840 TATGCATGGTGATATCGCTGTCACTTTCTCAGCCCTGCAGGCTTGTCAGAACCCAGTGACCACGTGGAACTGGTGGTGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCACTGCCTTCAGGAAGGGGTTTGGCTCTCA-GGGGTGTCTCCCTTCTCACAGCCCAGCCCTGGGGGATGATGTGGAA-GGTGTGAGCCCCATTTAACACAGTGCTTCTTTCTCTCCTAGGATTCTACAGCAAACCCACCCTCTCAGCTCAGCCCAGCCCTGTCCTGACCTTAGGAGGTAAGGTGACCCCATTATGTCCTTCATGGCTGGGATTTGACAGGTTCATTCTGACTATGGATGGTGAACACAAGCTATACTGTCTCCTGGACCCTGAAAAACAGTCCAAT-GGACAGTTCCAAGCCCTGATCCTGGCGGACCCCATGACTTCTAGCCACAGGTGGAGGTTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103201776 459 - 106955855 TATGCACAGTGATATTGCTGTCACTTTCTCAGCCCTGCAGGTTTGTCAGAACCCAGTGACCACCTGGAACTGGTGGTGACAGATAAGAGGACACTCAGGGGTCCCAGCCCCAGGCACTGCCTTCGGGAAGGAGTTCCGCTCTCA-GGAGTGTCTCCCTTCTCACAGCCCAGCCCTGGGGGATGATGTGGGA-AGTGTGAGCCCCATTTAACGTGGTGCTGTCTTCTCTCCTAGGATTCTACAGCAAACCCACCCTATCAGCTCAACCCAGCTCTGTTCTGACCTCAGGAGGCAAGGTGACCCCATTATGTCCTCCATGGCTGGGATTTGACAGGTTCATTCTGACTGTGGAAGGTGAACACAAGCTATTCTGCCACCTGGACCCCGAAAAACAGTCCAAT-GGACAGTTCCAAGCCCTGATCCTGGTAGACCCCATGACTTCTAGCTGCAGGTGGAGGTTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60476594 456 + 64156825 CACACACAGTGATATTGCTGTCACTTTCTCAGCCCTTCAGGCTTGTCAGAACCTGGTGACCCCCTGGAGCTGGTGGGGACAGGTGAGAGGACCCTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGTTGGCTCTAG-GGGGCGTCGCCC-TCTCACAGCCCAGCCCTGGGGGATGATGTGGAA-GGTGTGAGTCCCATTTAACACGGTGCTTCCTTCTCTTCTAGGATTCTAGAGCAAACCCGCCCTCTCAGCTCAGCCCAGCCCTGTCCTGACCTCAGGAGGTAAGGTGACCCCATTACGTCCTTCACGGCTGGGATTTGACAGGTCCGTTCTGACTGTGGAAGATGAACACAAGCTATTCTGTCTCCTGGACCCCAAAACACAGTCCAAT-GGACAGTTCCAAGCCCTAATCCTGGTGGACCCCATGA--TCTAGCCACAGGTGGAGGTTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575325 456 + 59248254 CACACACAGTGATATTGCTGTCACTTTCTCAGCCCTTCAGGCTTGTCAGAACCTGGTGACCCCCTGGAGCTGGTGGTGACAGGTGAGAGGACCCTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGTTGGCTTTCA-GGGGCGTCTCCC-TCTCACAGCCCAGCCCTGGGGGATGATGTGGAA-GGTGTGAGTCCCATTTAACACGGTGCTTCCTTCTCTTCTAGGATTCTAGAGCAAACCCGCCCTCTCAGCTCAGCCCAGCCCTGTCCTGACCTCAGGAGGTAAGGTGACCCCATTACGTCCTTCACGGCTGGGATTTGACAGGTCCGTTCTGACTGTGGAAGATGAACACAAGCTATTCTGTCTCCTGGACCCCAAAACACAGTCCAAT-GGACAGTTCCAAGCCCTAATCCTGGTGGACCCCATGA--TCTAGCCACAGGTGGAGGTTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650381 456 + 51301725 CACACACAGTGATATTGCTGTCACTTTCTCAGCCCTTCAGGCTTGTCAGAACCTAGTGACCCCCTGGAGCTGGTGGTGACAGGTGAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGTCCGGCTCTCA-GGGGCGTCTCCC-TCTCACAGCCCAGCCCTGGGGGATGATGTGGAA-GGTGTGAGTCCCATTTAACACGGTGCTTCCTTCTCTTCTAGGATTCTAGAGCAAACCCGCCCtctcagctcagcccagccctgTCCTGACCTCGGGAGGTAAGGTGACCCCATTATGTCCTTCACGGCTGGGATTTGACAGGTCCGTTCTGACTGTGGAAGGTGAACACAAGCTATTCTGTCTCCTGGACCCCAAAACACAGTCCAAT-GGACAGTTCCAAGCCCTGATCCTGGTGGACCCCACGA--TCTAGCCGCAGGTGGAGGTTTA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19915545 453 - 122678785 TATGCAGGACGGTATCACTGTTACTATGAAAGCACCACTGACTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGTGACAGGTGCGAGCCCACACAGGG--CCCAGCCCCAGGCTCTGCCCTCAGGAAGAGGGTCTGGTTCCC--GGGTGTCTCCC---TCACAGCCCAGTTCTGGGG-ATCATGTGGAGCAATCTGAATCCCATTTAACACAGCCCCTCCCCCTCATCTAGGATTGCATGGCAAACCCAGCCTCTCAGCCCTGCCCAGCCCTGTCGTGCCCTCAGGAGGGGACATGACTCTCCAGTGTGGT-AATGGACAGGATTCCACAGGTTCATCCTGATAAAGGAAGTAGAAGGCCAGCCCTCCTGGACCCTAGACTCCCAGGGAGCCCCCATTGGGGGGGGTCCAGGCCCTATTACCTGTGGTTCAGGTAGCCCCCAGCCTCACCTGGAAGTTCA i canFam3.chr1 I 17311 I 174 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=52046.000000 s hg38.chr19_GL949753v2_alt 398162 29 + 796479 CCAGTCTGGTTTAGCAGACTTTAGCACCT s panTro4.chr19 59591012 29 + 63644993 CCAGTCTGGTTTAGCAGACTTTAGCACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507830 29 + 60714840 CCAGTCTGTTTTAGCAGACTTTAGCACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202235 29 - 106955855 CCAGTCTGGTTTAGCAGACTTTAGCACCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60477050 29 + 64156825 CCAGTCTGGTTTAGCAGACATTATCACCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575781 29 + 59248254 CCAGTCTGGTTTAGCAGACATTATCACCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650837 29 + 51301725 CCAGTCTGGTTTAGCAGACTTTATCACCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19915998 174 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=61221.000000 s hg38.chr19_GL949753v2_alt 398191 33 + 796479 GAGACCAAGAGCTCCAGCAGCTCACTAGATTCT s panTro4.chr19 59591041 33 + 63644993 GAGACCAAGAGCTCCAGCAGCTCACTAGATTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507859 33 + 60714840 GAGACCAAGAGCTCCAGCAGCTCACTAGATTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202264 33 - 106955855 GAGACCAAGAGCTCCAGCAGCTCACTAGATTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60477079 33 + 64156825 GAGACCAAAAGCTCCAGGAGCCCACTGGATTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575810 33 + 59248254 GAGACCAAAAGCTCCAGGAGCCCGCTGGATTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650866 33 + 51301725 GAGACCAAAAGCTCCAGGAGCCCACTGGATTCT i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19916172 33 - 122678785 GGGACCACCAGGACTCACAGGTCCCCAGGGTCA i canFam3.chr1 I 174 T 9796 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=44857.000000 s hg38.chr19_GL949753v2_alt 398224 24 + 796479 GACCATACCTGGAGGCAACCTGGT s panTro4.chr19 59591074 24 + 63644993 GACCATACCTGGAGGCAACCTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507892 24 + 60714840 GACCATACCTGGAGGGGACCTGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202297 24 - 106955855 GACCATACCTGGAGGTGACCTGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60477112 24 + 64156825 GACCATACCTGGAGGTGACCTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55575843 24 + 59248254 GACCATACCTGGAGGTGACCTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650899 24 + 51301725 GACCATACCTGGAGGCGACCTGGT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19916205 9796 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=41747.000000 s hg38.chr19_GL949753v2_alt 398248 20 + 796479 GAAAGAAGAGGCTTGGAAGG s panTro4.chr19 59591098 20 + 63644993 GAAAGAAGAGGCTTGGAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507916 20 + 60714840 GAAAGAAGAGGCTTGGAAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202321 20 - 106955855 GAAAGAAGAGGCTTGGAAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60477136 20 + 64156825 GAAAGAAGGAGCTTGGAAGG i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55575867 20 + 59248254 GAAAGAAGGAGCTTGGAAGG i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47650923 20 + 51301725 GAAAGAAGGGGCTTGAAAGG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19906409 20 - 122678785 GAGAAGGGAAGTTTGGGGAG i canFam3.chr1 T 9796 C 0 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=12099.000000 s hg38.chr19_GL949753v2_alt 398268 11 + 796479 AACCAGCCCTC s panTro4.chr19 59591118 11 + 63644993 AACCAGCCCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507936 11 + 60714840 AACCAGCCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202341 11 - 106955855 AACCAGCCCTC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55575895 6 + 59248254 AAGGAG----- i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47650943 11 + 51301725 AACCAGCCCTC i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19906429 11 - 122678785 AATCAGCCCTT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I e rheMac3.chr19 60477156 13 + 64156825 I a score=1681411.000000 s hg38.chr19_GL949753v2_alt 398279 867 + 796479 TGAGTCCCAGC---TCCTCGCACACTCCAGGTGTGCCTAGGGAGCCCTCCCATTTGACTCCACAGGGTCCTGTCATGGCCCATGGAGAGAGGTTGACCCTCCTGTGTTGCTCTGATGTTGGCTGCAAAATATTCTCTCTGTCCAAGAAAAAGATACATCACCTTC--CCCAGAGTTCTGGCCAGAA------------GTTCTCCCAAGATGACTTCCCCTTAGGCCCTGTGAGCATCTCCCATGGGGGCCAGTACAGATGTT-CAGTGGACACAACCTCTCCTCTAGGTGGTCAGCCCCCAGTGACCCCCCTGGACATCCTGATCGCAGGTGAGAAGCCCAGCGGGTTCAGTTAGGGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCTAGGTGGTGATGGTTGGGATGAGGGGTGGGGGTCTCAagggagggagaggc----------agagagagagagaggatggattgggcggggacggggaAACTCAGAGAAAACAGAGACAGAGATACTGAGGGTCCC--AGAGAGAGGCCTGGGGAAGTCTCAGCTCAGAACAA-GGTGGGGCGGCTCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCGTGAGACAGCCTCCCTCTTGGTGCAACCAGGCCCCACTGTGGTCTCAGGAGAGAACATGGCTCTGCTGTGTCAGATGCAAAGCTGGGTGGACAGACACTTTCCTTCTATCTGAGGAGGATGCAGCTGACAAGACCCCACCCTCGTATCTAATATCAAAGTACCCTACTCTGTGGTA-GAGGTTGAATTCTCCATGAGTCCTGCGACCTCAGCCCATGCGGGGACCTACAGGTGCTATGCCTCATAGAGTGTTTACCCCAAGCTGTTGT--TCCCCCAGTGACCTCCTGG s panTro4.chr19 59591129 869 + 63644993 TGAGTCCCAGC---TCCTCGCACACTCCAGGTGTGCCTAGGGAGCCCTCCCATTTGACTCCACAGGGTCCTGTCATGGCCCATGGAGAGAGGTTGACCCTCCTGTGTTGCTCTGATGTTGGCTGCAAAATATTCTCTCTGTCCAAAAAAAAGATACATCACCTTC--CCCAGAGTTCTGGCCAGAA------------GTTCTCCCAAGATGACTTCCCCTTGGGCCCTGTGAGCATCTCCCATGGGGGCCAGTACAGATGTT-CAGTGGACACAACCTCTCCTCTAGGTGGTCAGCCCCCAGTGACCCCCCTGGACATCCTGATCGCAGGTGAGAAGCCCAGCGGGTTCAGTTAAGGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCTAGGTGGTGATGGTTGCGATGAGGGGTGGGGGTCTCAAGGGAGGGAGAGGC----------AGAGAGAGAGAGAGGATGGATTGGCCGGGGACGGGGAGACTCAGAGAAAACAGAGACAGAGATACTGAGGGTCCCAGAGAGAGAGGCCTGGGGAAGTCTCAGCTCAGAACAA-GGTGGGGCGGCTCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCGTGAGACAGCCTCCCTCTCAGTGCAACCAGGCCCCACTGTGGTCTCGGGAGATAACATGGCCCTCCTGTGTCAGATGCAAAGCTGGGTGGACAGACACTTTCCTTCTTTCTGAGGAGGATGCAGCTGACAAGACCCCACCCTCGTATCTAATATCAAAGTACCCTACTCCGTGGTA-GAGGTTGAATTCTCCATGAGTCCCGTGACCTCAGCCCATGCAGGGACCTACAGGTGCTATGCCTCATAGAGTGTTTAACCCAAGATGTTGT--TCCCCCAGTGACCTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56507947 867 + 60714840 TGAGTCCCAGC---TCCTCGCACACTCCAGGTATGCCTAGGGAGCCCTCCCATTTGACTCCACAGGGTCCTGTCATGGCCCATGGAGAGAGGTTGACCCTCCTGTGTTGCTCTGATGTTTGCTACAAAATATTCTCTCTGTCCAAGAAAAAGATACGTCACCTTC--CCCAGAGTTCTGGCCAGAA------------GTTCTCCCAAGATGGCTTCCCCTTGGGCCCTGTGAGCATCTCCCATGGGGGCCAGTACAGATGTT-CAGGGGACACAACCTCTCCTCTAGGTGGTCAGCCCCCAGTGACCCCCCTGGACATCCTGATCACAGGTGAGAAGCCCAGCGGGTTCAGTTAGGGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCTA-GTGGTGATGGCTGGGATGAGGGATGGGGGTCTCAAgggagggagaggc--------agagagagagagagaggatggattgggcagggatggggagaCTCAGAGAAAACAGAGACAGAGATACTGAGGATCCC--AGAGAGAGGCCTGGGGAAGTCTCAGCTCAGAACAA-GGTGGGGTGGCTCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCGTGAGACAGCCTCCCTCTTGGTGCAACCAGGCCCCACGGTGG-CTCAGAAGAGAACATGGCCCTGCTGTGTCAGATGCAAAGCTGGGTGGACAGACACTTTCCTTCTATCTGAGGAGGATGCAGCTGACAAGACCCCACCCTCGTATCTAATATCAAAGTACCCTACTCCGTGGTA-GAGGTTGAATTCTCCATGAGTCCTGTGACCTCAGCCCATGCAGGGACCTACAGGTGCTATGCCTCATAGAGTGTTTACCCCAACCTGTTGT--TCCCCCAGTGGCCTCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103202352 877 - 106955855 TGAGTCCTGGC---TCCTTGCACACTCCAGGTGTGCCTAGGGAGCCCTCCCATTTGACTCCACAGGGTCCTGTCATGGCCCATGGAAAGAGCTTGACCTTCTTGTGTTGCTCTGATGTTGGTTACAAAACATTCTCTCTGTCCAAGAAAAAGATACATCACCTTC--CCCAGAGTTATGGCCAGAA------------CTTCTCTGAGGATGACTTCCCTTTGGGCCTTGTGAGCATCTCCCATGGGGGCCAGTACAGATATT-CAGTGGACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCCTGGACATCCTGATCGCAGGTGAGAAGCCCAGTAGGTTCAGTCAGAGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCCAGGTGGTGATGGCTGGGATGAGGGGTGGGGGTCCCAagggagggagaggcagagagagagagagagagagagaggatggattgggcagggacagggggactcagagaaaacagagacagagagactgagggtccc--agagagagGCCTGGGGAAGTCTCAGCTCAGAACAA-GGTGGGGCGACCCCTCACCCATCCTTCTTCTCTCCAGGACAGACCCCTGAGACACCCTCCCTCTCCGTGCAACCAGGCCCCATGGTGGCCTCAGGAGAGAACATGGCCCTGCTGTGTCAGATGCAAAGGTGGGTGGACAGACACTTTCCTTCCATCTGAGGAGGATGCAGCTGACAAGACCCCGCCCTCGTATCTAACATCAAAGTACCCTACTCAGTGGTA-GAGGTTGAATTCTCCATGAGTCCCGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTGTGCCTCATAGAGTGTTTACCCCAACCTGTTGT--TCCCCCAGTGGCCTCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60477169 864 + 64156825 GGAGTCCCGGC---TCCTCACACACTCCAGGTGTGCCTAGGGAGCCCTCTCATTTGA--CCACAGGGCCTTGTCATGGCCCATGGAGAGAGCTTGACCCTCTTGTGTTGCTCTGATGTTGGCTACAAAATATTCTCCCTCTTCAAGAAAAAGATACATCACCTTCTGAGTTGAGTTCTGGCCAGAA------------TTTCTCCCAGGATGACTTCCCCTTGGGCCCTGTGAGCATCTCCCATGGGGACCAGTACAGATGCT-CAGTGGACCCAACCTTTCCTCTAGGGGGTCTGCCCTCAGTGA-CCCCCTGGACATCCTGATCACAGGTGAGAAGCCCAGAGGGTTCAGTCAGGGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCCAGGTGGTGATGGCTGGGATGAGGGGTGGGGGTCCCAAGGGAGGGAGAGGC------------AGAGACAGAGAGGAGGGATTGGGCAGGGAGAGGGGAACTCAGAGAAAACAGAGACAGAGAGACTGAGGGTCCC--AGAGAGAGGCCTGAGGAGGTCTCAGCTCAGAACAA-GGTGGTGTGGCTCCTCACCCATCCTTCTTATCTCTAGAACAGATCCATGACAGACGTTCCCTCTCGGTGCAACCAGGCCCCACGGTGGCCTCAGGGGAGAACGTGACCCTGCTGTGTCAGATGTAAAGGTGGGTGGATGGACACTTTCCTTCCATCTGAGGAGGATGCAGCTGGCAAGACCCCAGCCTCGTATCTAATATCAAAGTACCACACTCAGCGGTA-AAGGCTGAATTCTCCGTGAGTCCTGTGACCTCAGGCCATGTGGGGACCTACAGGTGCTATGCCTCACAGGGCGTTTACCCCAACCTGTTGT--TCCCCCAGCGGCCTCCTGG i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55575901 863 + 59248254 -GAGTCCCGGC---TCCTCACACACTCCAGGTGTGCCTAGGGAGCCCTCTCATTTGA--CCACAGGGCCTTGTCATGGCCCATGGAGAGAGCTTGACCCTCTTGTGTTGCTCTGATGTTGGCTACAAAATATTCTCCCTGTTCAAGAAAAAGATACATCACCTTCTGAGTCGAGTTCTGGCCAGAA------------TTTCTCCCAGGATGACTTCCCCTTGGGCCCTGTGAGCATCTCCCATGGGGACCAGTACAGATGCT-CAGTGGACCCAACCTTTCCTCTAGGGGGTCTGCCCTCAGTGA-CCCCCTGGACATCCTGATCACAGGTGAGAAGCCCAGAGGGTTCAGTCAGGGACCCAGGCTCTGTACAGG-CCCTGCCAGGGGAGCCCAGGTGGTGATGGCTGGGATGAGGGGTGGGGGTCCCAagggagggagaggc------------agagacagagaggagggattgggcagggagaggggaactcagagaaaacagagacagagagactgagggtccc--agagagagGCCTGAGGAGGTCTCAGCTCAGAACAA-GGTGGTGCGGCTCCTCACCCATCCTTCTTATCTCTAGAACAGATCCATGACAGACGTTCCCTCTCGGTGCAACCAGGCCCCACGGTGGCCTCAGGGGAGAACGTGACCCTGCTGTGTCAGATGTAAAGGTGGGTGGATGGACACTTTCCTTCCATCTGAGGAGGATGCAGCTGGCAAGACCCCAGCCTCGTATCTAATATCAAAGTACCACACTCAGCGGTA-AAGGCTGAATTCTCCGTGAGTCCTGTGACCTCAGGCCATGTGGGGACCTACAGGTGCTATGCCTCACAGGGCGTTTACCCCAACCTGTTGT--TCCCCCAGCGGCCTCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47650954 851 + 51301725 TGACTCACGGC---TCCTCGCACACTCCAGGTGT----------CCCTCCCATTTGA--CCACAGGGCCCTGTCATGGCCCATGGAGAGAGCTTGACCCTCTTGTGTTGCTCTGATGTTGGCTACAAAACATTCTCTCTGTCCAAGAAAAAGATACATCACCTTC--ACCAGAGTTCTGGCCAGAA------------GTTCTCCCAGGATGACTTCCCCTTGGGCCCTGTGAGCATCTCCCATGGGGGCCAGTACAGATGCT-CAGTGGACACAACCTTTCCTCTAGGGGGTCTGCCCCCAGTGA-CCCCCTGGACATCCTGATCACAGGTGAGAAGCCCAGCAGGTTCAGTCAGGGACCCAGGCTCTGTACAGG-CCCTGCC-GGGGAGCCCAGGTGGTGATGGCTGGGATgaggggtgggggtcccaagggagggagcgac------------agagacagagaggagggattgggcagggagagggggactcagagaaaacagagacagggagactgagggtccc--agagagaggcctgaggaggTCTCAGCTCAGAACAA-GGTGGTGCGGCTCCTCACCCATCCTTCTTATCTCCAGAACAGATCCATGACAGACATTCCCTCTCGGTGCAACCAGGCCCCACGATGGCCTCAGGGGAGAACGTGACCCTGCTGTGTCAGATGTaaaggtgggtggatggacacTTTCCTTCCATCTGAGGAGGATGCAGCTGGCAAGACCCCAGCCTCGTATCTAATATCAAAGTACCACACTCAGCGGTA-AAGGCTGAATTCTCCGTGAGTCCTGTGACCTCAGCCCATGTGGGGACCTACAGGTGCTATGCCTCACAGAGCATTTACCCCAACCTGTTGT--TCCCCCAGCGGCCTCCTGG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19906440 801 - 122678785 GGAATCTGGGCTGGTCTTCTC-----CCAGGTTTAGCACGAAAGCCCTACCTGCTGACCCAGCAGGGCCCTATTGTGACCTCTGGACAGAACCTGACTCTCCAGTGTCTCTCCGATGTCAGCTATGACAGATTCACTCTGTCCAAGAGAGGGGCACAGAACCTTC--TCCAGTGTCATGGCTGACAGCCACAGGCTGGGCTTTCTAGGGCAGATATCCCCCCGGGCCCTGTGA-CACCCTCCATGGAGGCTGGTACACATGCTATGGTGGACAC-ACCTCTCCTCCCAGTGGTCAGCCCTCAGTGA-ACCTCAGGTCATCCTGGTCACAGGTTAGGGGCC--ATGGGTGCAGGCAGAACCCCAGATTCTGCACAGGTCCCTGATAGGGGACCTTAGAAGGTGATGGCC--AACCAAGACTAGGG--------------------------------AGAGAGACAGGGGATGG--------GGATGGGAGAGACTCAGAGGACACAGA--------------------C--AGA-----------------CTCAGGTCAGATCAAGGGCTGGATCACCCCACACCAACCCTTCCTCTTTCTAGGACAGCTCC-TCACATACCCTCCCTCTGGATGCAGCCAGGACCCTCAGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCATGGATTTCTGTG----CACACTATCCTTTTGTCCAAGGAGGGAGCAGCCGAT---ACCCCCCATCCGTGTCTTACATTAAAGTAATGCGCTGGGCAGTACCAGGCTGAATTCTCCCCAAGTCCTGTGACTTCAGCCCAGAGAGGGACCTACAGGTGTTATGGCTCATCCAACACCTCCCCCTACCTCTTGTCACACTCCAGTGACCCCCTGG i canFam3.chr1 C 0 T 59534 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=461121.000000 s hg38.chr19_GL949753v2_alt 399146 283 + 796479 taatacaggagttactaagaaattgttttaggcagatagtaagggtaaaggttcttggtggaaattttccagtaataaggaacaatccctgaaccatctcttttctaacagaaatgacagcttaaatggcccggccagcaagctttaatgtgcaaatgccaaccatt--------------------------------------------------------------------------------------------------aaaaactgggttcactcaatatggtgattcctactgtcttctctttgttaccacctgtgccaagtgtgatggccacctccagacaacaccatgtattcaaaacatcatggtgaccC s panTro4.chr19 59591998 282 + 63644993 TAATACaagatttactaagaaattgttttaggcagatagtaagggtaaaggttcttggtggaaattttccagtaataaggaacaatccctgaaccatctcttttctaacagaaatgacagcttaaatggcccggccagcaagc-ttaatgtgcaaatgccagccatt--------------------------------------------------------------------------------------------------aaaaactgggttcactcaatatggtgattcctactgtcttctctttgttaccacctgtgccaagtgtgatggccacctccagataacaccatgtattcaaaacatcatggtgaccc i panTro4.chr19 C 0 I 1908 s ponAbe2.chr19 56508814 283 + 60714840 TAATACaggagttactaagaaattgttttaggcagatagtaagggtaaaggttcttggtggaaattttccagtaataagaaacaatccctgaaccatatcttttctaacagaaacgacagcttaaaaggcccggccagcaagctttaatgtgcaaatgccagccatt--------------------------------------------------------------------------------------------------aaaaactgggttcactcaatatggtgattcctactgtcttctctttgtcaccacctgtgccaagtgtgatggccacctccagataacaccatgtattcaaaacatcatggtgaccc i ponAbe2.chr19 C 0 I 3503 s nomLeu3.chr10 103203229 380 - 106955855 taacacaggagttactaagaagttgttttaggcagttagtaagggtagaggttctcggtggaaattttccagtaataagaaacaatccctaaaccatctcttttctaacagaaacaacagcttaaatggcccggccagcaagctttaatgtgcaaatgccagccattaaaagctgggttcacccggggggcggagcctgcagtgagccgagatcgcgccactgcactccagcctgggtgaaacagcaagactccgtctcaaaaaaaaaaactgggttcactcaatatggtgattcc-actgtcttctctttgtcaccacctgtgccaagtgtgatggccacctccagataacaccatgtgttcaaaacatcatggtgaccc i nomLeu3.chr10 C 0 I 1915 s rheMac3.chr19 60478033 267 + 64156825 TAATACCggagttactaagaaattattctaggcagatagtaagggt----------------aattttccagtaataagaaacaatccctgaaccaccttttttctaacagaaaagacagcttaaatggcctggccagcaagctttaatgtgcaaatgccagtcatt--------------------------------------------------------------------------------------------------aaaacctgggttcactcaacatggtgattcccaccgccttctctttgtcaccacctgtgccaagtgtgatggccacctccagataacaccatgtgttcaaaacatcacggtgaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55576764 267 + 59248254 TAATACCggagttactaagaaattattctaggcagatagtaagggt----------------aattttccagtaataagaaacaatccctgaaccaccttttttctaacagaaaagacagcttaaatggcctggccagcaagctttaatgtgcaaatgccagtcatt--------------------------------------------------------------------------------------------------aaaacctgggttcactcaacatggtgattcccactgtcttctctttgtcaccacctgtgccaagtgtgatggccacctccagataacaccatgtgttcaaaacatcacggtgaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47651805 267 + 51301725 TAATACCGGAGTTACTCAGAAATTATTCCAGACAGATAGTAAGGGT----------------AATTTTCCAGTAATAAGAAACAATCCCTGAACCACCTTTTTTCTAACAGAAAAGACAGCTTAAATGGCCTGGCCAGCAAGCTTTAATGTGCAAATGCCAGTCATT--------------------------------------------------------------------------------------------------AAAACCTGGGTTCACTCAATATGGTGATTCCCACCATCTTCTCTTTGTCACCACCTGTGCCAAGTGTGATGGCCACCTCCAGATAACACCACGTGTTCAAAACATCATGGTGACcc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=1365.000000 s hg38.chr19_GL949753v2_alt 399429 1 + 796479 a s panTro4.chr19 59594188 1 + 63644993 a i panTro4.chr19 I 1908 C 0 s nomLeu3.chr10 103205524 1 - 106955855 a i nomLeu3.chr10 I 1915 C 0 s rheMac3.chr19 60478300 1 + 64156825 a i rheMac3.chr19 C 0 I 4782 s macFas5.chr19 55577031 1 + 59248254 a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47652072 1 + 51301725 a i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56509097 3503 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=1509.000000 s hg38.chr19_GL949753v2_alt 399430 3 + 796479 aat s panTro4.chr19 59594189 3 + 63644993 aat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103205525 3 - 106955855 aat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55577032 3 + 59248254 cat i macFas5.chr19 C 0 I 5332 s papAnu2.chr19 47652073 3 + 51301725 cat i papAnu2.chr19 C 0 I 4776 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56509097 3503 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I e rheMac3.chr19 60478301 4782 + 64156825 I a score=394687.000000 s hg38.chr19_GL949753v2_alt 399433 1532 + 796479 gaatgaaaaa----gccctttttaatatgcatttttaaaggcctacagaaaaccagggccaaacctctcaattactctaaactgtctataatggaacaaaagccaaataaaaatcttgtagcctttataaaaaggctaaaagaggcactaaaaaagtatatctttttattctctaatccagttaagtaacagctcatcctgagggacaaatttattacacaggcagctcccaatattaaaaaaaaaaaaaaaaactacaaaagaaagctacaggaccaaatagcaccttaaaaaacctcctgaaggtggccactttggtcttttataatatggaccaggaggagtcccaaaagaaagaaaaaaagctcaggagaaggacaaagtctctagcagcagctttgaaggctcgcaaagtcccagatcaccaagatgcatcctctagttgctattagtgtagcaggccagaatgtccagtcagcaaaatgaagcaacctccactctgtccagcctgtggcaaaaaccactgaaaacagaactgcccccagacatggaggtcactgagttcaaaaccagtctcacagatggtccagcaaaactgatggatcctggtgcttgaacctaggctccagtagctcaaactgccattatagcacaagagccctggataattctggaaattaaaggaaggaaagtagacctccttctaaacactaaagctag----tctctctctcttttctattctctaatccaggcctcccttcttccttcatcacaaccgtaaggggcatcttaggaaaaagtctaatccaatattttctcaatcttagttAAAACATGCTTTCggtcaggcacggtggctcacgcctgtagtcccagcactttgggagactgacgtgggtggatcacctgaggttgggagttcaagaccagtctggccaacatggagaaacctcatctctactaaaaatacaaaaaattagccaggtgtggtggcacatgcctgtaatccaagctacttgggaggctgaggcaggagaattgcatgaacccaagaggcagaggttgcagtgagccgagatcgctctattgcactccagcctgggcaacaagagtgaaactccatctaaaacaaacaaacaaacaaacaaaaaaTCAAAAAAACATGCTTTCAAGCCATTGAagccattgtcatgatagctctactagtcagaaaagcctgcaagttaaccctagaaaataaaaataatttaactgtttacagcccacataatgtagcagaatcactgtcctctagggggagctcttagctggtaaacagccCgtaaagcaaaaagtaaataaggcagaataagcagtagtcactctctccaggcacaaacactcaattagctgagttaatagctctttaaaaagcacttaaattaagcaaggaaaaggcagctaacatttacactaactccaagtatgctttcttggttctccatgctcatgctgccatttaaaacaaaaaaacatgttcttactgctaataaatctc s panTro4.chr19 59594192 1521 + 63644993 gaatgaaaaa----gccctttttaatatgcattttaaaaggcctacagaaaaccagggccaaacctctcaattactctaaactgtctataatggaacaaaagccaaataaaaatcctgtaacctttataaaaaggctaaaagaggcactaaaaaagtatatctttttattctctaattcagttaaggaacagctcatcctgagggacaaatttattacacaggcagctcccaatattaaaaaaaaaa-------ctacaaaagcaagctacaggaccaaatagcaccttaaaaaacct---gaaggtggccactttggtcttttataatatggaccaagaggagtcccaaaagaaagaaaataagctcaggagaaggacaaagtctctagtagcagctttgaaggctcgcaaagtcccagatcaccaagatgcatcctctagttgctattagtgtagcaggccagaatgtccagtcagcaaaatgaagcaacctccactctgtccagcctgtggcaaaaaccactgaaaacagaactgcccccagacgtggaggtcactgagttcaaaaccagtctcacagatggtccagcaaaactgatggatcctggtgcttgaacctaggctccagtagctcaaactgccattatagcacaagagccctggataattctggaaattaaaggaagcaaagtagacctccttctaaacactaaagctag----tctctctctcttttctattctctaatccaggcctcccttcttcccacagcacaaccataaggggcattttaggaaaaagtctaatccaatattttctcaaccttagttAAAACATGCTTTCggtcaggcatggtggctcacgcctgtaatcccagcacttttggagactgaggtgggtggatcacctgaggttgggagttcaagaccagcctggccaacatggagaaacctcatctctactaaaaatacaaaaaattagccaggagtggtggcacatgcctgtaatccaagctacttgggaggctgaggcaggagaattgcttgaacccaagaggcagaggttgcagtgagccgagatcgctctattgcactccagcctgggcaacaagagtgaaactccatctaaaacaaacaaacaaacaaacaaaaaaccaaaaaa-caTGCTTTCAAGCCATTGAagccattgtcatgatagctctactagtcagaaaagcctccaagttaaccctagaaaataaaaataatttaactgtttacagcccacataatgtagcagaatcactgtcctctagggggagctcttagctggtaaacagccCgtaaagcaaaaagtaaataaggcagaataagcagtagtcactctccccaggcacaaacactcaattagctgagttaatagctctttaaaaagcacttaaattaagcaaggaaaaggtaactaacatttacactaactccaagtatgctttcttggttctccatgctcatgctgccatttaaaacaaaaaaacatgttcttactgctaataaatctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103205528 1526 - 106955855 gaatgaaaaataaggccctttttaatatgcattttaaaaggcctatggaaaaccagggccaaacctctcaattactctaaactgtctataatggaacaaaagccaaataaaaatcctgtagcctttataaaaaggctaaaagaggcactaataaagtatatctttttattctctaattcagttaaggaacagctcatcctgaaggacaaatttattacacaggcagctcccaatatttaaagaaaa--------ctgcaaaagcaagctataagaccaaataacaccttaaaaaacctcctgaaggtagccacttcgatcttttataatagggaccaggaggagtcccaaaagaaagaaaa-aagctcaggagaaggacaaagtctctagcagcagttttgcaggcttgcaaagtccaggatcaccaagatgcatcctctagttgctattggtgtagcaggccagaatgtccagtcagcaaaatgaagcaacctccactctgtccagcctgtggcaaaaaccactgaaaacagaactgctcccagaggtggaggtcattgagttcaaaaccagtctcacagatggtccagcaaaactgatggatcctggtgcttgaacctcggctccagtagctcaaactgccattatagcacaggagccctggataattctggaaattaatggaaggaaagtaggcctccccctaagcactaaagccagtctctctctctctctcttctcttctctaatccaggcctcccttcttcccacagcacaactgtaaggggcgtctcaggaaaaagtctaatccaatattttctcaaccttagttAAAACATGCTTTCAgtcaggcatggtggctcacgcctgtaatcccaacactttgggaggctgaggtgggtggatcacctgaggtcgggagttcaagaccagcctggccaacatggagaaacctcgtctctactaaaaatacaaaaaattagctggggctggtggcacatgcctgtaatccaagctacttgggaggctgaggcaggaaaattgcttgaacccgagaggcagaggttgcagtgagccgagatcactctattgcactccagcctgggcaacaagagcgaaactctgtctAaaacaaacaaacaaacaaacaaacaaacaaaaaa-caTGCTTTCAACCCATTGAagccattgtcatgatagctctgctagtcagaaaagcctccaagttaaccctaggaaataaaaataatttaactgtttacagcccacataatgtagcagaatcactgtcctctagggggagctcttagctggtaaacagccCgtaaagcaaaaagtacataaggcagaagaagcagtagtcactgtctccaggcacaagcactcaattagctgagctaatagctcttacaaaagcgcttacattaaggaaggaaaaggtagctaacatttacactaactccaagtatgctttcttggttctccatgctcatgctgccatttaaaac----aaacatattcttactgctaataaatctc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56509097 3503 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I e papAnu2.chr19 47652076 4776 + 51301725 I e macFas5.chr19 55577035 5332 + 59248254 I e rheMac3.chr19 60478301 4782 + 64156825 I a score=657268.000000 s hg38.chr19_GL949753v2_alt 400965 1347 + 796479 ctataaaaa-atcaccaaaaaattagcaagttatt---cttattttttcttccac-aaaaagtagcagggatgcattgtaagaaacatcaaagaataaacaataaggtagccaaaggaaataagttagccaatcgggcagctaagtcaaaggcataaaagcttcaaggccttaatgcacttcaagccccttctaatctaaaaaggctccataagagaaatcacacctcagtattcccctgaaaaaatagaataagccacttctcaagggcatacttttcagccctcaggatggctacagtcaggatggcaaatttattggtcagcctccagccaacagaaagttcttgaagtcct-----aagcttttcactcaggaaaaaataaaacttatcaatgggctcaaacattgttttcagacgggaaacctctagaatggttaaccacgtaacctctctagctcacttccaacaaaaattgacacaatagcagaagcccagccctaggaaataaaaccacctttatttaactcaggaaatttagtattagtaagaactctcatctctgtctccttccctaagccaagctaaaaagggccctacactgttcgtctttcaacctcctcggcagtaaaagttacaggaatcaacttctacatgcatcacactcaagtcaaagccaaaaagct-aaaaaaccaacccctaacagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagctaaatattaatgtaaaaaaatagaagatcttaagctaaaaatcatagaagataagtaactaagtaagggctacacatcttactcagtcccactcctacccaccaaatatgttttattatttctaaccttttctcacaaagttcacggccaaatattaaaacttctttttaacacttatttgcagcaaaatttaaatattcataaaatcacatttgtaactttctgaatccccaaaggaaaatgttatatcttggcaagtttttttttttttttttttttttttttttttttttgagacagagtctcgctctgttgcccagcctggagtgcagtggtgcaatctcagctcactgcaagctccgcctcccgagttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctcattttgtgtatttttagagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctgggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccagcaagtaaagttttaaacaaaaattactGGCCAGAAA s panTro4.chr19 59595713 1325 + 63644993 ctataaaaatatcaccaaaaaat-agcaggttattat-ccttttttttcttccgc-aaaaagtagcagggatgcattgtaagaaacatcaaagaataaacaataaggtagccgaaggaaataagttagccaatcgggcagctaagtcaaaggcataaaagcttcaagaccttaatgcacttcaagccccttctaatctaaaaaggctccataagagaaattacacctcaatattcccctgaaaaaatagaataagccacttctcaagggcatacttttcagccctcaggatggctacagtcaggatggcaaatttattggtcagcctccagccaatagaaagttcttaaagtccttcacaaagcttttcactcaggaaaaaataaaacttatcaatgtgctcaaacattgttttcagacgggaaacctctagaatggttaaccacgtaacctctctagctcacttccaacaaaaattaacacaatagcagaagcccagccctaggaaataaaaccatctttatttaactcaggaaatttagtattcgtaaaaactctcatctctgtctccttccctaagccaagctaaaaagggccctacactgttcgtctttcaacctcctcggcagtaaaagttacaggaatcaacttctacatgcatcacactcaagtcaaagccaaaaagct-aaaaaaccaacccctgacagtaaaaaaaaaaaaaaaaaa-------------------gctaaatattaatgtaaaaaattagaagatcttaagctaaaaatcatagaagataagtaactaagtaagggctacacatcttactcagtcccactcctacccaccaaatatgttttattatttctaaccttttctcacaaagttcatggccaaatattaaaacttctttttaacacatatttgcagcaaaatttaaatattcataaaatcacatttgtaactttctgaatccccaaaggaaaatgttatatcttggcaagttttttttttttttttttttttttg----------gagacagagtctccctctgttgcccaggctgaagtgcagtggcacaatctcagctcactgcaagctccgcctcccaagttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcctggctaattttgtgtatttttagagagacggggtttcaccatgttagccacgatggtctccatctcctgacctcgtgatccacccacctgggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccagcaagtaaagttttaaacaaaaattactggccagaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56512600 1318 + 60714840 ctataaaaatatcaccaaaaaattagcaggttattatcctcagtttttcttccacaaaaaaatagcaggaatgcattgtaagaaacatcaaagaataaacaataaggtagccgaaggaaataagttagccaattgggcagctaagtcaaaggcataaaagcttcaaggccttaatgcacttcaagccccttcttatctaaaaagcctccgtaagagaaattaaacctcagtatccccctgaaaaaatagaataagccacttctcaagggcatacttttcagccctcaggatggctacagtcaggatggcaaatttattggtcagcctccagccaatagaaagtccttaaagtccttcacaaagcttttcactcaggaaaaaataaaac--atcaatgtgctcaaacattgttttcagacaggaaacctctagaatggttaaccacgtaacctctctagcttacttccaacaaaaattaacacaatagcagaagcccagccctaggaaataaaaccacctttatttaactcaggaaatttagtattagtaaaaactctcatctctgtctccttccctaagccaagctaaaaagggccctacactgttcttctttcaacctcctcggcagtaaaagttacaggaatcaacttctaaacgcatcacactcaagtcaaagccaaaaagctaaaaaaaacaacccctaacagtaaaagaaaaaaaaat----------------------gctaaatattaatgtaaaaaaatagaagatcttaagctaaaaatcatagaagataagtaactacgtaagggctacacatcttactcagtcccactcctacccaccaaatatgttttattatttctaaccttttctcacaaagttcactgccaaatattaaaacttatttttaacacatatttgcagcaaaatttaaatattcataaaatcgcatttgtaactttctgaatccccaaaggaaaatgttatatcttggcaagtaaagtttttttttttttt----------------gagacggagtctcgctctgtcccccaggctggagtgcggtggcacgatttcggctcactgcaagctccgcctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacaccctgctaattttgtgtatttttagagagacgaggtttcactgtgttagccaggatgatctcgatgtcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccggcaagtaaagttttaaacaaaaattactggccagaaa i ponAbe2.chr19 I 3503 C 0 s nomLeu3.chr10 103207054 1320 - 106955855 ctgtaaaaatatcaccaaaaaattagcaagttattatcctcagtttttcttccacaaaaaaatagcagggatgcattgtaagaaacatcaaagaataaacaataaggtagccgaaggaaataaattagcgaaccgggcagctaagtcaaaggcataaaagcttcaaggccttaatgcacttccagccccttcgaatctaaaaaggtaccataagagaaattaaacctcagtattcctctgaaaaaatagaataagccacttcccaagggcatagttttcagccctcagcatggctacagtcaggatagcaaatttattggtcagcctccagccaataggaagtccttaaagtccttcacaaagcttttcacttagaaaaaaataaaacttaccaatgtgctcaaacattgttttcagacaggaaatctctagaatggttaaccacgtaacctctctagctcacttccaacaaaaattaacacaatagcggaagcccagccctgggaaataaaaccacctttatttaacccaggacatttagtattagtaaaaactctcatctctgtctccttccctaagccaagctacaaagggccccacacggttcttcttgcaacctcctcggcagtaaaagttacaggaatcaacttctaaatgcatcacactcaagtcaaagccaaaaaccg-aacaaagcaacccctaacagtaaaataaaaaaaaaaaaaaa-----------------gctaaataccaatgtaaaaaaatagaagatcttaagctaaaaatcacagaagataagtaactaagtaagggctacacatctt----agtcccactcctacccaccaaatatgttttattatttctaaccttttctcacaaagttcacagccaaatattaaaacttctttttaacacatatttgcagcgaaatttaaatattcataaaatcgcatttgtaactttctgaatccccaaaggaaaatgttgtatcttggcaagtaaagttttttgttttttt----------------taggtagagtctcacgctgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccgagttcacgccattctcctgcctcagcttcctgagtaactgggactacaggcacccgccaccacgcccggctaattttgtgtatttttagagagacgaagttttactgtgttagcccagatagtctcgatgtcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggctggcaagtaaagttttaaacaaaaattactggccagaaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I e papAnu2.chr19 47652076 4776 + 51301725 I e macFas5.chr19 55577035 5332 + 59248254 I e rheMac3.chr19 60478301 4782 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 402312 1 + 796479 A s panTro4.chr19 59597038 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56513918 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103208374 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55582367 1 + 59248254 a i macFas5.chr19 I 5332 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I e papAnu2.chr19 47652076 4776 + 51301725 I e rheMac3.chr19 60478301 4782 + 64156825 I a score=12992.000000 s hg38.chr19_GL949753v2_alt 402313 13 + 796479 -AAAAAAA-AGCCAT s panTro4.chr19 59597039 12 + 63644993 -aaaaaaa--gccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56513919 12 + 60714840 -aaaaaaa--gccat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103208375 14 - 106955855 -aaaaaaaaagccat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60483083 13 + 64156825 aaaaaaaa--aacac i rheMac3.chr19 I 4782 C 0 s macFas5.chr19 55582368 13 + 59248254 aaaaaaaa--aacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47656852 13 + 51301725 aaaaaaaa--aacac i papAnu2.chr19 I 4776 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47335687 5525 + 50890351 I a score=1989252.000000 s hg38.chr19_GL949753v2_alt 402326 889 + 796479 TCTTGTGAAAATTGTTGTAGTCACACTGCTATTTGCAATGAAACTATACTCTGTGGCACCCACAATGTAGAATTCTGGTTGTAAAATTGTAATTGTGGTAATATTTTGCCTGATTATCATCCTTATAACAAAATTAATAATTGCAGAAAAAATTTAATCAAGGttgttttgcttatagcagaagtaatagtaacgaat-aaaaagcaagcattaaagttttactagcattaagtgtaataaaactttttaccaaaggttggtgatataATGCACTGTAagctataaa---aaggttataaaaacatttacat-aaaaaaggattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaaggaagaatgtttaggacaagtctaaaagtttaagtgtgttgtaagagagtctgtgaaagtcata-aaaaatttaataattaaaaaaagtcaaaaTTAACGCTAAAGTTATTTTAGCCACCCAATAATGTATTTCTCCCAATCATACTGCAAGTAGTAAAAATGGCCTAAGCCTAAAGTTATTCTCTACTGGCACGTTAAGGAGGAAACATATGCTTTTCTCTAGGAAAAAGTTACTTTTACAGTAACGTTCCTGGTAATGTACACCGACATCTAGTGGAGGAAAACCTGTATTGCAATCCATTGATACAA-CAACAGGTGTCAAACTCCACTGTCACTTAGGGTCTGTAGGACTGCCACTAACGATGGTA--------tttttttttt-ttttttgaaacagagtcttgctctgttgcccaggctggaatgcagtggcacaacctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcaacctcccaagttgctgggattacaggaactcaccatcat s panTro4.chr19 59597051 897 + 63644993 tcttgtgaaaattgttgtagtcacactgctatttgcaatgaaactatactctgtggcacccacaatgtagaattctggttgtaaaattgtaattgtggtaatattttgcctgattatcatccttataacaaaattaataattgcagaaaaaaTTTAATCAAGGttgttttgcttatagcagaagtaatagtaacgaat-aaaaagcaagcattaaagttttactagcattaagtgtaataaaactttttaccaaaggttggtgatataATGCACTGTAagctataaa---aaggttataaaaacatttacat-aaaaaaggattttgtatggtgaatacttgtcctaaaagaaaataactggttgcttaaaggaagaatgtttaggacaagtctaaaagtttaagtatgttgtaagagagtctgtgaaagtcata-aaaaatttaataattaaaaaaagtcaaaaTTAACGCTAAAGTTATTTTAGCCACCCAATAATGTATTTCTCCCAATCATACTGCAAGTAGTAAAAATGGCCTAAGCCTAAAGTTATTCTCTAATGGCACGTTAAGGAGGGAACATATGCTTTTCTCTAGGAAAAAGTTACTTTTACAGTAACGTTCCTGGTAATGTACACCGACATCTAGTGGAGGGAAACCTGTATTGCAATCCATTGATACAA-CAACAGGTGTCAAACTCCACTGCCACTTAGGGTCTGTAGGACTCCCACTAACGATGGTGtttttttttttttttttt-ttttttgaaacagagtcttgctctgctgcccaggctggagtgaagtggcacaacctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcaacctcccaagtagctgggattacaggcactcaccatcat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56513931 890 + 60714840 tcttgtgaaaattgttgtagtcaccctgctatttgcaat-aaactatactctgtggcacccacaatgtagaattctggttgtaaaattctaattgtggtaatattttgcctgattatcatccttataaccaaattaataattgcagaaaaaaTTTAATCGAGGttgttttgcttgtagcagaagtaatagtaaccaat-aaaaagcaagcattaaagttttactagcattaagtgtaataaaactttttaccaaaggttggtaataTAatgcactctaagctataaa---aaggttataaaaaattttacat-ataaaaggattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaaggaggaatgtttaggacaagtctaaaagtttaagtatgttgtaagagagtc--tgaaagtcata-aaaaaattaataaTTAAAAAAAGTCAAAAGTAACGCTGAAGTTATTTTAGCCACCCAATAATGTATTTCTCTCAATCATATTGCAAGTAGTAAAAATGGCCTAAGCCTAAAGTTATTCTCTAATGGCACGTTAAGGAGGAAAC--ACGCTTTTCTCTAGGAAAAAGTTAGTTTTACAGTAACGTTTCTGGTAATGTACACCGACATCTAGTGGAGGAAAATCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAACTCCGCTGTCTCTTAGGGTCTGTAGGACTCCCACTAACGATGttt---tttgttttttggttt-ttttttgaaatggagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcccgggttcaagtgattatcctgcctcaacctcccgagtagttgggattacaggcactcaccatcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103208389 903 - 106955855 tcttgtgaaaattgttgtagtcacgctgctatttgcaataaaactatactctgtggcacccccaatgtagcattctgattgtaaaattctaattgtggtaatattttgcctgattatcatccttataaccaaattaataattgcagaaaaaaTTTAACCGAagttgttttgcttatagcagaagtaatagtaatgaat-aaaaagcaagcattaaagttttattagcattaagtgtaataaaactttctacCAAAGGTTGGTAATATAATGCACTCTAagctataaaaagaaggttatacaaaattttacataaaaaaaggattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaaggaagcatgtttaggacaagtctaaaagtttaagtatgttgtaagagagtctgtgaaagtcata-aaaaatttaataatttaaaaaagtcaaaaTTAACGCTAAAGTTATTTTAGCCACCCAATGATGTATTTCTCCCAATCATACTGCAAGTTGTAAAAATGGCCTAAGCCTAAAGTTATTCTCTAATGGCACGTTAGGGAGGAAATGTATGCTTTTCTCTAGGAAAAAGTTACTTTTATAGTAACGTTTCTGGTAATGTACACCGACATCTAGTGGAGGAAAATCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAACTCCGCTGTCACTTAAGGTCTGTAGGACTCCCACTAACGATGGttttgttttttttttgttttgttttttgaaacagagtcttgctctgttgcccaggctggactgcagtggcacaatctcagctctctgtaacctccgcctcccaggttcaagtgattatcctgcctcaacctcccgagtagctgggattacaggcactcaccatcat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60483096 883 + 64156825 tcttgtgaaaattggtgtagtcatgctactatttgcaacaaaactatacactgtggcacccacaatgtagaattctggttgtaaaattctaattgtggtaatgttttgcctgattaccatccttataacaaaattaataattgcag-aaaaatgtaatcaagattgttttgcttatagcagaagtaacagtaacatat-aaaaagcatgcattcaagttttactagcattaagtttaataaaactttttacCAAAGGTTGGTAATATAAC-CACTCTAagctataaaaagaaggttagaaaaa-ttttacat-aaaaaatgattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaaggaagaaagtttaggacaagtctaaaagtttcagtatgttgtaagagagtctgtgaaagtcataaaaaaaattaATATTTTAAAAAAGTCCAAATTAACCCTAAAGTTATTTTAACCACCCAATAATATATTTCTCCCAATCATATTGCAAGTTGTAAAAATGGCCTAGGCCTAAAGTTATTCTCTAATGGTACGTTTAGGGGGAAATGTATGCTTTTCTCTAGGAAAAAGTTGCTTTTACAGTAACGTTTCTGGTAACGCACAGCAACACCTAGTGGAGGAAAACCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAACTCCACTGTCACTTAGGGTCTGTAGGACTCACACTAACGATGGTA----------tttttctt-ttttttgaaacggagtcttgctctgttgcccaggctggacggcagtggcacaatctcagctcactgtaa------cctcccgggttcacgtgattctcctgcctcaacctcctgagtagctggaattacaggcactcaccgtcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55582381 883 + 59248254 tcttgtgaaaattggtgtagtcatgctactatttgcaacaaaactatacactgtggcacccacaatgtagaattctggttgtaaaattctaattgtggtaatgttttgcctgattaccatccttataacaaaattaataattgcag-aaaaatgtaatcaagattgttttgcttatagcagaagtaacagtaacatat-aaaaagcatgcattcaagttttactagcactaagtttaataaaactttttacCAAAGGTTGGTAATATAAC-CACTCTAagctataaaaagaaggttagaaaaa-ttttacat-aaaaaatgattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaagaaagaaagtttaggacaagtctaaaagtttcagtatgttgtaagagagtctgtgaaagtcataaaaaaaattaATATTAAAAAAAAGTCCAAATTAACCCTAAAGTTATTTTAACCACCCAATAATATATTTCTCCCAATCATATTGCAAGTTGTAAAAATGGCCTAGGCCTAAAGTTGTTCTCTAATGGCACGTTAAGGGGGAAATGTATGCTTTTCTCTAGGAAAAAGTTGCTTTTACAGTAACGTTTCTGGTAACGCACAGCAACACCTAGTGGAGGAAAACCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAACTCCACTGTCACTTAGGGTCTGTAGGACTCACACTAACGATGGTA----------tttttctt-ttttttgaaatggagtcttgctctgttgcccaggctggacggcagtggcacaatctcagctcactgtaa------cctcccgggttcaagtgattctcctgcctcaacctcctgagtagctggaattacaggcactcaccgtcat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47656865 885 + 51301725 tcttgtGAAAATTGGTGTAGTCATGCTACTATTTGCAACAAAACTATACACTGTGGCACCCACAATGTAGAATTCTGGTTGTAAAATTCTAATTGTAGTAATGTTTTGCCTGATTACCATCCttataacaaaattaataattgcAG-AAAAATGTAATCAAGATTGTTTTGCTTATAGCAGAAGTAACAGTAACATATAAAAAAGCATGCATTCAAGTTTTACTAGCATTAagtttaataaaactttttacCAAAGGTTGGTAATATAAC-CACTCTAAGCTATAAAAAGAAGGTTagaaaaa-ttttacat-aaaaaaggATTTTGTATGGTGAATACTTgtcctaaaagaaaataactgcttGTTTAAAGGAAGAAAGTTTAGGACAAGTCTAAAAGTTTCAGTATGTTGTAAGCGAGTCTGtgaaagtcattaaaaaaattaataattaaaaaaagtcCAAATTAACCCTGAAGTTATTTTAACCACCCAATAATATATTTCTCCCAATCATATTGCAAGTTGTAAAAATGGCCTAGGCCTAAAGTTATTCTCTAATGGCACGTTAAGGGGGAAATGTATGCTTTTCTCTAGGAAAAAGTTGCTTTTACAGTAACGTTTCTGGTAACGCACAGCAACACCTAGTGGAGGAAAACCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAATTCCACTGTCACTTAGGGTCTGTAGGACTCACACTAACgatggta---------ttttttctt-ttttttgaaacggagtcttgctctgttgcccaggctggacggcagtggcacaatctcagctcactgtaa------cctcccgggttcaagtgattctcctgcctcaacctcctgagtagctgggattacaggcactcaccgtcat i papAnu2.chr19 C 0 I 20 s chlSab2.chr6 47341212 873 + 50890351 tcttgtgaaaattggtgtagtcatgctactatttgcaacaaaactatacactgtggcacccacaatgtagaattctggttgtaaaattctaattgtggtaatattttgcctgattatcatcattataacaaaatgaataattgcag-aaaaATGTAATCAAGGTTGTTTTGCTTATAGCAGAAGTAACAGTAATGAAT-AAAAAGCATGCATTCAAGTTTTACTAGCATTAAGTTTAATAAAACTTTTTACCAAAGGTTGGTAATATAatgcactctaagctat---aagaaggttagaaaaa-ttttacat-aaaaaaggattttgtatggtgaatacttgtcctaaaagaaaataactggttgtttaaaggaagaaagtttaggacaagtctaaaagtttcagtatgttgtaagagagtctgtgaaagtcatt-aaaaaattaataaTTAAAAAAAGTCAGAATTAACCCTAAAGTTATTTTAACCACCCAATAATATATTTCTCCCAATCATATTGCAAGTTGTAAAAATGGCCTAGGCCTAAAGTTATTCTCTAATGGCACGTTAATGGGGAGATGTATGCTTTTCTCTAGGAAAAAGTTGCTTTTATAGTAACGTTTCTGGTAACGCACAGCAACACCTAGTGGAGGAAAACCTGTATTGCAATCCATTGATGTAACCAACAGGTGTCAAATTCCACTGTCACTTAGGGTCTGTAGGACTCACACTAACGACGGTA----------tttttc-c-ttttttgaaacgaagtcttgctctgttgcccaggctggactgcagtggcacaatctcagttcactgtaa------cctcccgggttcaagtgattctcctg------cctattgagtagctgggattacaggcactcaccgtcat i chlSab2.chr6 I 5525 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I a score=13942.000000 s hg38.chr19_GL949753v2_alt 403215 8 + 796479 gcccggct s panTro4.chr19 59597948 8 + 63644993 gcccggct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56514821 8 + 60714840 gcctgcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103209292 8 - 106955855 gcctggct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60483979 8 + 64156825 gcccggct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55583264 8 + 59248254 gcccggct i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47342085 8 + 50890351 gcccggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e papAnu2.chr19 47657750 20 + 51301725 I a score=2015250.000000 s hg38.chr19_GL949753v2_alt 403223 879 + 796479 aatttttgtatttttagtagagatgaggtttcaccatgctggccaggctggtcttgaattcctgtcctcaggtgatctgcccgcgttggcctcccaaagtgctgggattacagacatgaaccaccacacccagccCCAATGGTGGTAAtcttaatactcatattctaaccctatattttaaaccttcttgtaaaatttctctctttttgcctaaaagtaattaaactccaaatggtgctgcaagcaaagccacacatggacacgccattcttttgagaaaccttaaatcaacctcagaaaaaggcccaactgctgttcccccacacaacaccccttttcagcaggaagtagccagaaagaaacatgatccaacacgcactaacagcagttagctttgcctctctttaaggggaggaataatacaggagttattaaggaattattttaggcacatagtaagggtaaaggttcttggtggaaattttcctgtaataagaaacaacccctgaaccatctcttttctaacagagaagctgtcttaaagagcctggccggcaagctttaaaattcaaatgctggccattaaaacatgggttcatgcaatatggtgatttctgccatctt---cttatcaccacctgtgccaagcgtgatggccacctccaaataacacaaagcatcatggtggcccacatttgcatattaaaaggctaaggtgggaggaacaagtttttcgagggctatgtaaatgacacacctggcctaaccaatcccctgggccctatgcaaaccagacacttgcctcctccagcctcccaatataagcaaccacttttccaccacacacggggttct-tctttgttccaagctcccctcccttgg s panTro4.chr19 59597956 878 + 63644993 aatttttgtatttttagtagagacggggtttcgccatgttggccaggctggtcttgaactcctgtcctcaggggatctgccctcctcggcctcccaaagtgctgggattacagacatgaaccaccacacccagccCCAATGGTGGTAAtcttaatactcatattctaaccctatattttaaaccttcttgtaaaatttctctctttttgcctaaaagtaattaaactccaaacggtgctgcaagcaaagccacacatggacacgccattcttttgagaaaccttaaatcagcctcagaaaaaggcccaactgctcttcccccacacaacaccccttttcagcaggaagtagccagaaagaaccatgatccaacacgcactgacagcagttagctttgcctctctttaaggggaggaataatacaagagttattaaggaattattttaggcagatagtaagggtaaaagttcttggtggaaattttcctgtaataagaaacaacccctgaaccatctcttttctaacagagaagctgtcttaaagagcctggccggcaagctttaaaatgcaaatgctggccattaaaacatgggttcatgcaatatggtgatttctgccatctt---cttatcaccacctgtgccaagcgtgatggccacctccaaataacacaaagcatcatggtggcccacatttgcatattaaaaggctaaggtgggaggaacaagtttttcgagggctatgtaaatgacacacctggcctaaccaatcccctgggccctatgcaaaccagacac-cgcctcctccagcctcccaatataagcaaccacttttccaccacacacggggtcct-tctttgttccaagctcccctcccttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56514829 864 + 60714840 aatttttgtatttttagtagagacggggtttcaccatgtttgccaggcttgt--------------ctcaggtgatctgccagcctcggcctcctaaagtgctcagattacaggcgtgagccacctcacccagccCCAATGGTGGTAATCTTAAtattcatattctaaccctatattttaaaccttcttgtaaaatttatctctttttgccttaaagtaattaagctccaaacggtgctgcaagcaaagccacacatggacacgccattcttctgagaaaccttaaatcaacctcagaaaaaggcccaactgctgttcccccacacgacaccccttttcagcaggaagtagccagaaagaaccatgatccaacacgcactaacagcagttagctttgcctctctttaaggggaggaaTAATACagaagttattaaggaattattttaggcagatagtaagggtaaaggtttttggtggaaattttcctctaataagaaacaacccctgaaccatctcttttccaacagagaagctgtcttaaagggcctggccggcaagttttaatatgcaaatgctggccattaaaacatgagttcatgcaatatggcaatttccgccacctt---catatcaccacctgtgccaagtgtgatggccacctccaaataacacaaagcatcatggtggcccacatttgcatattaaagggctaaggtgggaggaacaggtttttcgagggctatgtaaatgacacacctggtctaaccaatcccctgggccctatgcaaaccagacac-cgcctcctccagcctcccagtataagcaaccacttttccaccacacaaggggttcc-tttttgttccaagctcccctctcttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103209300 876 - 106955855 aatttttgtatttttagtaaagacgggttttcgccatgttggccaggctggtcttgaactcctgtcctcaggtgatctgcccgcctcggcctcccaaagtgctgggattacagacatgaaccaccgcacccagccCCAATGGTGGTAAtcttaatactcatattctaaccctatattttaaagctccttgtaaaatt--tctgtttttgcctaaaagtaattaaactccaaatggtgctgcaagcaaagccacacatggacacaccattcttttgagaaaccttaaatcaacctcagaaaaaggcccaactgctgttcccccacacaacagcccctttcagcaggaagtagccagaaagaaccatgacccaacacgcactaacagcagttagctttgcctctctttaaggggaagaaTAATACaggagttactaaggaattattttaggcagatagtaagggtaaagggtcttggt-gaaattttcctgtaataagaaacaacccctgaaccatctcttttctaacggagaagctgtcttaaagggtctggccggcaagctttaaaatgcaaatgctggccattaaaacataggttcatgcaatatggcaatttccgccatctt---cttatcaccacctatgccaagcctgatggccacctccaaatcacacaaagcatcatggtggcccacatttgcatattaaagggctaaggtgggaggaaaaggttgttccagggctatgtaaatgacacacctgatctaaccaatcccctgggccctatgcgaaccagacac-cgcctcctccagcctcccaatattagcaactgctttgccgccacacatggagttttctctttgttccaagctcccctccctggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60483987 880 + 64156825 aatttttgtattttttgtagagatggggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgatctgcccgcctcggcctcccacagtggtgagattacaggcgtgagccactgcactcagccCCAATGATGGTAAtcttaatactcatattctaaccctatattttaaaccttcttgtaaaatgtatctctttttgcctaaaagtaattaaactccaaacggtgttgcaagcaaagtcacacatggacatgccattcttctgagaaaccttaaatcaacctcaggaaaaggcccaactgctgttcccccacgcaacacccctttacagcaagaagtagctagaaagaatcgtggtccaacacccactaatagcagttagctttgcctctctttaagaggaggaaTAATACaggagttattaagaaattatttgaagcagatagtaagggtaaaggttcttggaggacattttcctgtaataagaaacaacccctgaaccatctcttttccaacacagaagctgtcttaaagggcctgaccagcaagctat-atatgcaaatactggccattaaaacatgagttcatggaatatggcgatatccgccatcttctccttgtcaccacctatgccaagtgccatggccacctccaaataacacaaaacttcatggtggtccacatttgcatattaaagggctaaggtgggaggaacaggtctttccagggctatgcaaatggcacacttggtctaaccaatctcctgggtcctgtgcaaaccagacac-tgcctcctccagcctcccaatgtaagcaaccacttttccaccacacagcaggttcc-tctttgttccaaactcccctcccttgg i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55583272 880 + 59248254 aatttttgtattttttgtagagatggggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgatctgcccgcctcggcctcccacagtggtgagattacaggcgtgagccactgcactcagccCCAATGATGGTAAtcttaatactcatattctaaccctatattttaaaccttcttgtaaaatgtatctctttttgcctaaaagtaattaaactccaaacggtgttgcaagcaaagtcacacatggacatgccattcttctgagaaacctcaaatcaacctcagaaaaaggcccgactgctgttcccccacgcaacacccctttacagcaagaagtagctagaaagaatcgtggtccaacacccactaatagcagttagctttgcctctctttaagaggaggaaTAATACaggagttattaagaaattatttgaagcagatagtaagggtaaaggttcttggtggacattttcctgtaataagaaacaacccctgaaccatctcttttccaacacagaagctgtcttaaagggcctgaccagcaagctat-atatgcaaatactggccattaaaacatgagttcatggaatatggcgatatccgccatcttctccttgtcaccacctatgccaagtgccatggccacctccaaataacacaaaacttcatggtggtccacatttgcatattaaagggctaaggtgggaggaacaggtctttccagggctatgcaaatgacacgcttggtctaaccaatctcctgggtcctgtgcaaaccagacac-tgcctcctccagcctcccaatgtaagcaaccacttttccaccacacagccggttcc-tctttgttccaaactcccctcccttgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47657770 880 + 51301725 aatttttgtgtttttcgtagagacggggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgatctgcccgcctcggcctcccacagtggtgagattacaggtgtgagccactgcactcagccccaaTGATGGTAATCTTAATACTCATATTCTAACCCTATATTTTAAACCTTCTTGTAAAATGTATCTCTTTTTGCCTAAAAGTAATTAAACTCCAAACGGTGTTGCAAGCAAAGTCACACATGGACATGCCATTCTTCTGAGAAACCTTAAATCAACCTCAGGAAAAGGCCCGACTGCTGTTCCCCCACGCAAGACCCCTTTACAGCAAGAAGTAGCTAGAAAGAATCGTGATCCAACACCCACTAATAGCAGTTAGCTTTGCCTCTCTTTAAGAGGAGGAATAAtacaggagttattaagaaattatttgaagCAGATAGTAAGGGTAAAGGTTCTTGGTGGACATTTTCCTGTAATAAGAAACAACCCTTGACCCATCTCTTTTCCAACACAGAAGCTGTCTTAAGGGGTCTGGTCGGCAAGCTTT-ATATGCAAAAACTGGCCATTAAAACACGGGTTCATGCAATATGGCGATATCCGCCATCTTCTCCTTGTCACCACCTATGCCAAGTGCCATGGCCACCTCCAAATAACACAAAACATCTTGGTGGTccacatttgcatattaaagggctaaggtgggaggaacaGGTCTTTCCAGGGCTATGCAAATGACACACCTGGTCTAACCAATCCCCTGGGCCCTGTGCAAAccagacac-tgcctcctccagcctcccaatgTAACCAACCACTTTTCCACCACACAGCGGGTTCC-TCTTTGTTCCAAACTCCCCTCCCTTGG i papAnu2.chr19 I 20 C 0 s chlSab2.chr6 47342093 880 + 50890351 aatttttgtatttttcgtagagacggagtttcgttatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccgcctcggcctcccacagtggtgagattacaggtgtgagccactgcactcagccCCAATGATGGTAAtcttaatactcatattctaaccctatattttaaaccttcttgtacaatgtatctctttttgcctaaaagtaattaaactccaaacggtgttgcaagcaaagtcacacatggacatgccattcttctgagaaaccttaaatcaacctcaggaaaaggcccaactgctgttcccccacgcaacacccctttacagcaagaagtagctagaaagaattgtgatccaacacccactaatagcagttagctttgcctctctttaagaggaggaaTAATACaggagttattaagaaattatttgaagcaggtagtaaggataaaggttcttggtggacattttcctgtaataagatacaacccctgaaccatctcttttccaacacagaagctgtcttaaaggacctggtcggcaagcttt-atatgcaaatactggccattaaaacataggttcatgcaatatggtgatatccgccatcttctccttgtcaccacctatgccaagtgccatggccacctccaaataacacaaaacttcatggtggtccacatttgcatattaaagggctaaggtgggaggaacaagtctttccagggctatgcaaaagacacacctggtctaaccaatcccctgggccctgtgcaaaccagacac-tgcctcctccagcctcccaatgtaaccaaccacttttccaccacacagtgggttcc-tctttgttccaaactcccctcccttgg i chlSab2.chr6 C 0 I 8 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I a score=6533.000000 s hg38.chr19_GL949753v2_alt 404102 21 + 796479 ctctgtacagaggagctcttt s panTro4.chr19 59598834 21 + 63644993 ctctgtacagacgagctcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56515693 21 + 60714840 ctctgtacaaaggagctcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103210176 21 - 106955855 ctctgtacagaggagctcttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55584152 8 + 59248254 --------ggagtggc----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47658650 8 + 51301725 --------GGACtggc----- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47342973 8 + 50890351 I e rheMac3.chr19 60484867 8 + 64156825 I a score=573715.000000 s hg38.chr19_GL949753v2_alt 404123 243 + 796479 tcttctttctttcttctttcttgcctattaaactttttgctccttaaaaccactccacgtgtgtccttattgttttatctaaactggcatgagaccaaaaaccctagtcaccaaagccatatcaCTGGAGCTCATGGTCTCAGGTAAGAAACCTCCAACCCGTGTCCATTGAAGCTGGCATTAGTC--GTGTGAATGTAGAACTTCATGTTAGTAACACAGCTTTTAAAATGTTTCCCTAAATTg s panTro4.chr19 59598855 243 + 63644993 tcttctttctttcttctttcttgcctattaaactttttgctccttaaaaccactccacgtgtgtccttattgttttatctaaaccggcatgagaccaaaaaccctagtcaccaaagccatatcaCTGGAGCTCATGGTCTCGGGTAAGAAACCTCCAACCCGTGTCCATTGAAGCTGGCATTAGTC--GTGTGAATGTAGAACTTCATGTTAGTAACACAGCTTTTAAAATGTTTCCCTAAATTg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56515714 245 + 60714840 tcttctttctttcttctttcttgcctattaaacttttcgttccttaaaaccactccacgtatgtccttattgttttatctaaaccggcatgagaccaaaaaccctagtcaccaaagccatatcaCTGGAGCTCATGGTCTCAGGTAAGAAACCTCCAACCTGTGTCCACTGAAACTGGCATTAGTCATGTGTGAATGTAGAACTTCATGTTAGTAACACAGCTTTTAAAATGTTTCCCTAAATTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103210197 241 - 106955855 tc----ttctttcttctttcttgcctattaaacttttcgctccttaaaaccactccacgtgtgtccttattgttttatctaaaccggcatgagaccaaaaaccctagtCACCAAAGCCATGTCACTGGAGCTCATGGTCTCAGGTGAGAAACCTCCAACCTATGTCCATTGAAGCTGGCGTGAGTCATGTGTGAATGTAGAACTTCATGTTAGTAACACAGCTTTTAAAATGTTTCCCTAAATTg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60484875 244 + 64156825 tcttctttctttcttctctcttgcctattaaacttttctctccttaaaaccactccacgtgtgtcctcattgtttaatctaaaccagcatgagaccaaaaa-cctagtcaccaaagccgtatcaCTGAAGCTCACGGTCTCAGGTAAGAAACCTCCAACCCGTGTCTGTTGAAGCTGGCATGAGTCATGTGTGAACGCAGAATTTCATGTTAGTAACACAGCTTTTTAAATGTTTCCCTaaattg i rheMac3.chr19 I 8 I 2407 s macFas5.chr19 55584160 244 + 59248254 tcttctttctttcttctctctttcctattaaacttttctctccttaaaaccactccacgtgtgtcctcattgtttaatctaaaccagcatgagaccaaaaa-cctagtcaccaaagccgtatcaCTGAAGCTCTCGGTCTCAGGTAAGAAACCTCCAACCCGTGTCTGTTGAAGCTGGCATGAGTCATGTGTGAACGCAGAATTTCATGTTAGTAACACAGCTTTTTAAATGTTTCCCTaaattg i macFas5.chr19 C 0 I 2201 s papAnu2.chr19 47658658 244 + 51301725 tcttctttctttcttctctcttgcctattaaacttttctctccttaaaaccactccacgtgTGTCCTCATTGTTTAATCTAAACCAGCATGAGACCAAAAA-CCTAGTCACCAAAGCCGTATCCCTGAAGCTCACGGTCTCAGGTAAGAAACCTCCAACCCGTGTCTGTTGAAGCTGGCATGAGTCATGTGTGAACGCAGAATTTCATGTTAGTAACACAGCTTCTTAAATGTTTCCCTAAATTG i papAnu2.chr19 C 0 I 2117 s chlSab2.chr6 47342981 245 + 50890351 tcttctttctttcttctctcttgcctattaaacttttctctccttaaaaccactccacgtgtgtcctcattgttttatctaaaccagcatgagaccaaaaaccctagtcaccaaagccgtatcaCTGAAGCTCACGGTCTCAGGTAAGAAACCTCCAACCCGTGTCCATTGAAGCTGGCATGAGTCATGTGTGAATGCAAAATTTCATGTTAGTAACACAGCTTTTTAAATGTTTCCCTaaattg i chlSab2.chr6 I 8 I 1657 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I a score=428952.000000 s hg38.chr19_GL949753v2_alt 404366 870 + 796479 aggcggagcttgcagtgagccaagattgtgccattgcactccagcctgggcgacaaagagagactccgtctc-aaaaaaaaaaaaaaaaaGTTTCCCTaaattgtatatttttactgtatacaacatgtggtattgcaacattcctatttgtgggttggctaaatcgatctaataaacatacacatcagttcacatacttactactgtttgtggtgagaactcttaaatctactctcacagtgattttcaagaatagaatatatcgttattaactatagtcaccatgttgtagcatagatctggaagttattctgtcaaactggaattttggacccctctatcaacatcctcccaagatataggaataaatgtgagcacatcaaaagacacccaaaccattacttattataaaaattcataggaatccacagtgagacactacttcaaacactg---------------------------------------------gattggccatattctgaaaaataacaaatgtcaggaagggtgtgcgg-aaagagaaccttcacgcactgctggcatgattgtgaaatttttcggtgactgtgaaaagtggtttggAggccgggcgtggtggttcacgtttgtaatcccagcactttgggaggccgaggcaggaggatcacctcaggtcaggagtttgagaccggcctggccaaaatggcaaaaccccttctctactgaaagtgcaaaaattatctggg-cacggt-gcaggtgcctgtaatcccagctactcaggaggctgaggc---agaatagcttgaacccaggagcagaggttgcagtgagccgagatcgtgccgctgcactccagcctgggtgacagagccagactccatc---aaaaagaaagaaag-aaagagagagaga s panTro4.chr19 59599098 921 + 63644993 aggcggagcttgcagtgagccaagatcgtgccattgcactccagcctgggcgacaaagagagactccgtctcaaaaaaaaaaaaaaaaaaGTTTCCCTaaattgtatatttttactgtatacaacatgtggtattgcaacattcctatttgtgggttggctaaatcgatctaataaacatacacatgagttcacatacttactactgtttgtggtgagaacacttaaatctactctcacagtgattttcaagaatagaatatatcgttattaactatagtcaccatgttgtagcacagatctggaagttattctgtcaaactggaattttggacccctctatcaacatcctcccaagatataggaataaatgtgagcacatcaaaagacacccaaaccattacttattataaaaattcataggaatccacaatgagacactacttcaaacactggactggccatattcTTTTTTGTGTGTGTGTGTTTTTTTTTTAATTGATCGGCCATATTCTTaaaaataacaaacgtcaggaagggtgtgcggaaaagagaaccttcacgcactgctggcatgattgcgaaatttttcagtgactgtgaaaagtggtttggAggctgggcgtggtggttcacgcttgtaatcccagcactttgggaggccgaggcaggaggatcacctcagatcaggagtctgagaccggcctggccaaaatggcaaaaccccttctctactgaaagtgcaaaaattatccggg-cacggtggtgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatagcttgaacccaggagcagaggttgcagtgagccgagatcgtgccgctgcactccagcctcggtgacagagccagactccatc---aaaaagaaagaaag-aaagacagagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56515959 874 + 60714840 AGCAggagcttgcagtgagccaagatcatgccactgcactccagcctgggcgacaaagagagactccatctc-aaaaaaaaaaaaaaaaaGTTTCCCTaaactgtatatttttactgtatacaacatgtggtgttgcaacattcctatttgtgggttggctaaatcgatctaataaac--acacattagttcacatacttaacattgtttgtgatgagaacacttaaatctactctcacagtgattttcaagaatagaatatatcgttattaaccatagtcaccacattgtagcatagatctggaagttattctgtcaaactggaactttgggcccctctatcaacatcctcccaagatataggaataaatgtgggcacatcaaagaacactcaaaccattacttattataaaaattcatataaatccacaatgagacactacttcaaacactg---------------------------------------------gcttggccatactcttaaaaataacaaatgtcagaaagggtatgtggaaaagagaaccttcatacactgctggcatgatcgcgaaatttttcggtgactgtgaaaagtggtttgggggccgggcatggtggttcacgcttgtaatcccagcactttcggaggccgaggcaggaggatcacctcaggtcaggagttcaagaccagcctggccaaaatggcaaaaccccttctctactaaaagtacaaaaagtagccggg-tgtggtggcgggtgcctgtaatcccagctacacaggaggctgaggcaggagaatagcttgaacccaggagcagaggttgcagtgagtcgagatagtgccgctgcactccagcctgggagacagagccagactacatc---aaaaagaaagaaagaaaagaaagaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103210438 878 - 106955855 aggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcgacaaagagagactccgtctc--aaaaaaaaaaaaaaaTGTTTACTTaaattgtatatttttactgtatacaacacgtggtattgcaacattcctatttgtgggttggctaaatcgatctaataaacatacacgttagttcacatacttactattgtttggactgagaacacttaaatctactctcccagtgattttcaagaatagaatatatcgttattaactgtagtccccatgttataccatagatctggaagttattctgtcaaaccggaattttggacccctctgtcaacatcctcccaagatataggactaaatgtgggcacatcaaaagacacccaaaccattacttattataaaaattcatatgaatccacaatgagacactacttcacacactg---------------------------------------------gattgaccatattcttaaaaataacaaatgtcaggaagggcgtgcggaaaagagaaccttcatacactgctagcgtgattgcgaaatttttcggtaacagtgaaaagtggtttggaggccgggcatggtggttcacgcttgtaatcccagcactttcggaggccgaggagggagaatcaactcaggtcaggagttcgagaccagcccggccaaaacggcaaaaccccttctctactaaaagtataaaaatcagccgggccgcggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatagcttgaacccgggagcagaggttgcagtgagccgaggtcgtgccactgcactccagcctgggtgacagagccagactccatctcaaaaaaaaaagaaag-aaagaaaagaaaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=12185.000000 s hg38.chr19_GL949753v2_alt 405236 114 + 796479 gagagagagagagagagag-------------------------------agagggagggagggagggagggacggaggg------------------------------------ggagagagagagaggaaagaaaagaaagaaagaaagaaaaagagagaaag-aagaaaaagaAAAAA s panTro4.chr19 59600019 82 + 63644993 gagagagagagagagaga---------------------------------------------------------------------------------------------------gagaaagggaaagaaaagaaaagaaagaaagaaagaaaaagaaagaaag-aagaaaaagaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56516833 182 + 60714840 aagaaagaaagaaagaaaggaaggaagaaagaaagaaggaaggaaggaaaggagggagggagggagggaaggaaggaaggaagaaagaaagaaaaaagaaagaaagaaagaaagaaagaaagaaggaaagaaagaaaagaaaagaaagaaagaaaaagaaagaaagaaagaaaaagaaaaaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103211316 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=416193.000000 s hg38.chr19_GL949753v2_alt 405350 825 + 796479 GCGGTTTGACAGTTCCTTAA------------------------AAGATGAACCTAggaaggcttatatgctgttggtggtaaattagctcaacttctatggaaaacagcatagaggtttctcaaagaactaaatacagaactgccgtttgacccagcaatcccactactgtaaaagaaataattatattaaaaaagacacacgca-ctcgtatgttcaccgtggtgctattcacaatagcaaagtcatggaaccatcctagatgtccatccatcgtggcatggataaagtaaaagtggtaaatatatagcccagaatacagcatagccataaaaaatagtgaaatcatgtcctttgcaggaacatggatggagctggaggccatgatcctacgtgaactaactcagaatcagaataccaaacactgcatgatctcacttacaagtgggagctacacaataggcactcatggacataaagatggagataaacacagggaaacccaaaaggggggaagggtgggaggagggcaagaggttaaaaaaatatattagggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggcagagatgggggggatcacctgaggtcaggagttcgagacctgcctggtcaatgtgcagaaaccccatctctactaaaaatacaaaattagctgggcatggtggtgcatgcctgtaattccagctactcgggaggctgaggcaggagaattgcttaaacctggaaggtggaggttgcggtgagccgagatcgcaccactgcactccagcctgagcaacaagagtgaaactccatctcaaaaaaaaaaaa-------a s panTro4.chr19 59600101 856 + 63644993 gCGGTTTGACAGTTCCTTAGGATGTCAAGGTTTGACAGTTCCTTAAGATGAACCTAggaaggcttatatgctgttggtggtagattagctcaacttctatggaaaacagcatagaggtttctcaaagaactagatacagaactgccgtttgacccagcaatcccactactgtaaaagaaataattatattaaaaaagacacacggacctcgtatgttcaccgtggtgctattcacaatagcaaagtcatggaaccatcctagatgtccatccatcgtggcatggataaagtaaaagtggtaaatatatagcccagaatacagcatagccataaaaaatagtgaaatcatgtcctttgcaggaacatggatggagctggaggccatgatcctacgtgaactaactcagaatcagaagaccaaacactgcatgatctcacttacaagtgggagctacacaatgggcactcatggacataaagatggagataaacacagggaaacccaaaaggggggaagggtgggaggagggcaagaggttaaaaaaatatattagggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggcagagac-ggggggatcacctgaggtcaggagttcgagacctgcctggtcaatgtggagaaaccccatctctactaaaaatacaaaattagccgggcatggtggtgcacgcctgtaattccagctactcgggaggctgaggcaggagaattgcttaaacccggaaggtggaggttgcggtgagccgagatcgcaccactgcactccagcctgagcaacaagagtgaaactccatctcaaaaaaaaaaaaTCtatcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56517015 822 + 60714840 gcggtttgacagttccttaa------------------------aagatgaacctaggaaggctgatatgctgttggtggtaaattagctcaacttctatggaaaacagcatagaggtttgtcaaagaactaaacacagcactgccatttgacccagcaatcccactactgtaaaagaaataattatatt-aaaaagacacacgca-ctcgtatgttcactgcggtgctattcacaatagcaaagtcatggaaccatcctagatgtccaatcatcgtggcctggataaagtaaaagtggtaaatatataacccagaatacaacatagccataaaaaatagtgaaatcatgtcctttgcaggaacatgggtggagctggaggccatgatcctacgtgaactaactcagaatcagaagaccaaatactgcatgatctcacttacaagtgggagctacgcaatgggcgctcatgggcgtaaagatggagataaacacagggaaatccaaaaggtgggaagggtgggaggagggcaagaggttaaaaaaatatattaggtctgggtgcggtggctcacgcctgtaatcccagcactttgggaggcagaggc-gggcggatcacctgaggtcaggagttcgagaccagcctggccaacgtggagaaaccccatctctactaaaaatacaaaattagccgggcatggtggcacatgcctgtaatcccagctcctcgggaggctgaggcaggagaactgcttaaacccggaaggtggaggttgtggcgagctgaggtcgcaccactgcactccagcctgag-aacaagagtgaaactccatctcaaaaaaaaaaaa-------a i ponAbe2.chr19 C 0 I 13 s nomLeu3.chr10 103211316 815 - 106955855 gcgatttgacagttccttaa------------------------aagatgaacctaggaaggcttatatgctgctggtggtaaattagctcaacttctatggaaaacagcatagaggtttctcaaagaactaaatacagaactgccgtttgacccagcaaccccattactgtaaaagaaataattatattaaaaaag--acacgca-ctcgtatgttcactgcagtgctattcacaatagc--agtcatggaaccatcctcgatgcccatccatcatggcctggataaagtaaaagtggtaaatatataacccagaatacaacatagccataaaaaatagtgaaatcatgtcctttgcaggaccatggatggagctggaggccatggtcctacgtg----aactcagaatcaaaagaccaaatactgcatgatctcacttacaagtgggagctacgcaatgggcactcatggacataaagatggagaaaaacacagggaaatccgaaaggggggaagggtgggaggagggcaagaggttaaaaaaatatattagggctgggtgcggtggctcacgcctgtaatcctagcactttgggaggcagaggc-gggtggatcacctgaggtcaggagttcgagaccagcctggccaacgtggagaaacccataattttgtaaaaatacaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggag-attgcttaaacccggaaggtggaggttgcagtgagccgagattgcaccactgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaa-------a i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=2542.000000 s hg38.chr19_GL949753v2_alt 406175 39 + 796479 TCtatctatctatttatatatatatat----------------------------acacacacacac s panTro4.chr19 59600957 67 + 63644993 tctatctatctatttatatatatatatatatatatatatatatatatatatataGACACACACACAC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103212131 24 - 106955855 ---aaatatatatatatatatatatat---------------------------------------- i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56517837 13 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=235272.000000 s hg38.chr19_GL949753v2_alt 406214 473 + 796479 atacataCACCAAACAAGCACATGTACCTTTTGAAT-----ataaaataaaataaaataataatataaaataaaataaaaAAtaaacctagaattactctatgatctagaaatttcacttctaggtatgtgactaaaggtttaggttatacaagacgaatgaagttt-gcaatgtaccctacaacattttgtctttagttaacaatactgcatcatgaagttaaaaattggtaggagaattaactcttcctaccacaat-aaaaaAAAAGACTGATAGTAGATATtgtgaaaggaaattaaattttgggaccccacactcatttagctaagggggaaagtcaagctggggactgggtcacacaaacctgcctctccattttggttcgtgaataagatggctacaaggtgaaaagctacatg--cctcccccacgttttgcccacaagaagattcctagtgagctgttaaaatttcaccatgg s panTro4.chr19 59601024 481 + 63644993 ATACATACACCAAACAAGCACATGTACCTTTTGAATataaaataaaataaaataaaataataatataaaataaaataaaaAAtaaacctagaattactctatgatctagaaatttcacttctaggtatatgactaaaggtttaggttatacaagacaaatgaagttt-gcaatgtaccctacaacattttgtctttagttaacaatactgcatcatgaagttaaaaattggtaggagaattaactcttcttaccacaataaaaaAAAAAGACTGATAGTAGATATtgtgaaaggaaattaaatttggggaccccacactcatttagctaagggggaaagtcaagctggggactgggtcacacaaacctgcctctccattttggttcttgaataagatggctacaaggtgaaaagctacatgaccccccaccacgttttgcccacaagaagattcctagtgagctgttaaaatttcaccacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56517850 471 + 60714840 ATATATATACCAAACAAGCACACGTACCTTTTGAAT-----ataaaataaaatataataataatataaaataaaataaaagataaacctagaattactctataatctagaaattccacttctaggtatgtgactaaaggtttaggttatacaagactaatgaagtttagcaatacacactacaacattctgtgtttagttaacaataccgcgtcatgaagttaaaaattggtaggagaattaagtcttcttaccacaat-aaaaaAAATGACTG---GTAGATATTCtgaaaggaaattaaatttggagaacccaaactcatttagctaagggggaaagtcaagctgggaactgggtcactaaaacctgcctccccattttggttcccaaataagatggctacaagatgaaaagctacacg--cctcccccacgttttgcccacaagaagattcctagtgagctgttaaaatttcaccacgg i ponAbe2.chr19 I 13 C 0 s nomLeu3.chr10 103212155 475 - 106955855 atatataCACCAAACAAGCACAGGTACCTTTTGaat-----ataaaataaaattaaataataatataaaataaaataaaaaataaacctagaattactctatgatctagaaattccacttctaggtatgtgactaaaggtttaggttatacaagacaaatgaaatttggcaatgtaccctacgacattttgtctttaattaacaatactgcatcatgaagttaaaaattggtaggagaattaactcttcttaccacaataaaaaAAAATGACTGATAGTAGATATtgtgaaaggaaattaaatttggggaccccaaactcatttggctaagagggaaagtcaagctggggactgggtcacacaaacctgcctccccattttggttcataaataagatggctacaagatgaaaagctacacg--cctccccaacgttttgcccacaagaagattcctagtgagctgttaaaatttcaccacgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=15019.000000 s hg38.chr19_GL949753v2_alt 406687 55 + 796479 caatgtaaattgatagcttatctttccaATGTATATTGATAGCTTATCTTTCCAG s panTro4.chr19 59601505 55 + 63644993 caatgtatattgatagcttatctttccaatgtatattgatagcttatctttccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103212630 55 - 106955855 caatgtatattgatagcttatctttccaatgtatattgatagcttatctttccag i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=2871.000000 s hg38.chr19_GL949753v2_alt 406742 32 + 796479 TGTATACTGATAGCTTATCTTTCCAGTGTATA s panTro4.chr19 59601560 32 + 63644993 tgtataTTGATAGCTTATCTTTCCAGTGTATA i panTro4.chr19 C 0 T 87 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 406774 40 + 796479 TTGATATCTTATCTTTCCAGTGTATGATAGCTTATCTTTC e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I e panTro4.chr19 59601592 87 + 63644993 T a score=9595.000000 s hg38.chr19_GL949753v2_alt 406814 113 + 796479 CAATGTATACTGATAGCTTATCTTtccagtgtatactgatagcttatctttccagtgcatactgatagcTTATCTTTCCAGTGTATACTGATAGCTTATCTTTCCAGTGTATG s panTro4.chr19 59601505 113 + 63644993 caatgtatattgatagcttatctttccaatgtatattgatagcttatctttccagtgtataTTGATAGCTTATCTTTCCAGTGTATATTAATAGCTTATCTTTCCAGTGTATA i panTro4.chr19 T 87 T 26 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=8775.000000 s hg38.chr19_GL949753v2_alt 406927 95 + 796479 TTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTC s panTro4.chr19 59601592 95 + 63644993 TTAATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTC i panTro4.chr19 T 26 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47658902 2117 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=7410.000000 s hg38.chr19_GL949753v2_alt 407022 29 + 796479 CAATGTATATTGATAGCTTATCTTTCCAG s panTro4.chr19 59601687 29 + 63644993 CAGTGTATATTGATAGCTTATCTTTCCAG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47661019 29 + 51301725 CAATGTATATTGACAACTTATCTTTCCAG i papAnu2.chr19 I 2117 I 78 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=4463.000000 s hg38.chr19_GL949753v2_alt 407051 49 + 796479 TGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTC s panTro4.chr19 59601716 49 + 63644993 TGTATATTGACAGCTTATCTTTCCAGTGTATATTGATAGCTTATCTTTC i panTro4.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e ponAbe2.chr19 56518321 0 + 60714840 C e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47661048 78 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=14491.000000 s hg38.chr19_GL949753v2_alt 407100 56 + 796479 CAATGTATATTGATAGCTTATCTTTCCAGTGTAtattgatagcttatctttccagt s panTro4.chr19 59601765 56 + 63644993 CAGTGTATATTGATAGCTTATCTTTCCAGTGTATATTGATAGCTTACCTTTCcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56518321 56 + 60714840 caatgtatattgatagcttatctttccaatgtatattggtagcttatctttccaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103212685 0 - 106955855 C e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47661048 78 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=577042.000000 s hg38.chr19_GL949753v2_alt 407156 1167 + 796479 gtatattgataacttatctttccaggtacagtctccccagcccatcagacacaaatgcatatctgatcattcccccacccaattttgtctatgtttatcttatgtaaaatgcagattcactgca-tattttcctctgccccatttgtttttgtcgtctgatgtaaaaagtgcagattcactgaaccagacaaaggcatgaatgactatttttaaaaaaaatacagattcactgagctagacaaaggcatgcgtaactatttttccttaccctcctcttacatgaaaattgtgtgcttctcaatatcccgccctttaccctttaaatttggatccctcaaaatcatcttcagagaaaggcatagatctgtctcccaggcacatctttaactttggcaaataaatctcctgaaatgataagagacttatctcatTGGACAATATCcaaacacttgtgcccaagtgtttatagaagcattattcacaataaaaagataaaagtatcacaaatgtccaccaaccaacgtgttgcatccatatgttagaaatttactcatccataaaaatgaagtactgatgcatgctgcaatttggagattcaaaatatgaagctaagtgaaagaagccagatccaaaggtcacatactatatgattacatttatataaaatgtccagcagctggaaatccacagagacagaaagcagattgatggttgcctggggctgagcaggggtagggagaggagagggactgctccgtggaacggggttccttttggggtgatgaaaatctttgggaactagaggtggcagttgctgcaatgaaaatctactaaatgccacagagttgtatatatatatatatgtat--------------------------------tttttttttgagacggagtttcacttttattgccc-aggctggagtgcagtggtgtattctcgcgtctctgcaac-ttccgcctc-tcagtttcaagcgattttcctgcctcagccccccaagtagctgggattgcaggtggccaccacaacacctgtctaatttttctgtatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcggccccccaaagtgctgggattataggcgtgagccactgcgcccggcctagagt s panTro4.chr19 59601821 1179 + 63644993 gtatattgatagcttatctttccaggtacagtctccccagcccatcagacacaaatgcatatctgatcattcccccgcccaattttgtgtatgtttatcttatgtaaaatgcagattcactgca-ttttttcctctgccccatttgtttttgtcgtctgatgtaaaaagtgcagattcactgaaccagacaaaggcatgaatgactattttttaaaaaaatacagattcactgagctagacaaaggcatgcgtaactatttttccttaccctccttttacatgaaaattgtgtgcttctcaatatcccaccctttaccctttaaatttggatctctcaaaatcatcttcagagaaaggcaaagatctgtctcccaggtacatctttaactttggcaaataaatctcctgaaatgataagagacttatcttatTGGACAATATCcaaacacttgtacccaagtgtttatagaagcattattcacaataaaaagataaaagtatcacaaatgtccaccaaccaacgtgttgcatccatatgttagaaatttactcatccataaaaatgaagtactgatgcatgctgcaatttggagattcaaaatatgaagctaagtgaaagaagccagaccgaaaggtcacgtattgtatgattacattgatataaaatgtccagcagctggaaatccacagagacagaaagcagattgatggttgcctggggctgagcaggggtagggagaggagagggactgctccatggaacggggttccttttggggtgatgaaaatctttgggaactagaggtggcagttgcaacaatgaaaatctactaaatgccacagagttgtatatatatacatatatatatatata--------------------ttttttttttttttgagacggagtttcactcttattgccc-aggctggagtgcagtggtgtattctcgcgtctctgcaac-ttccgcctc-tcagtttcaagcgattttcctgcctcagccccccaagtagctgggattgcaggtgcccaccacaacacctggctaatttttctgtatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccgcctcggccccccaaagtgctgggattataggcgtgagccactaagcccaacctagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56518377 1200 + 60714840 gtatattgatagcttatatttccaggtacagtctccccagcccatcagacacaaatgcatatctgatcgttcccctgcccaattttgtc--tgtttatcttatgtaaaatgcagattcactgcgtttttttcctctgccgcatttgtttttgtcatctgatgtaaaaagtgcagattcactgaaccagacaaaggcacgaatgactattttttaaaaaaatactgatgcactgagctagacaaaggcatgtgtaactatttttccttaccctcctcttacatgaaaattgtgttcttctcaatatcccgccctttaccctttaaatttggagccctcaaaatcatcttcagagaaaggcatagatctgtctcccaggcacatctttacctttggcaaataaatcccctgaaatgat-agagacttgtcttgtTGGACAATATCcaaacacttgtacccaagtgtttatagaagcattattcacaataaaaagataaaagtatcacaaatgtccaccaacaaatgtgttgcatccatatgttagaaatttactcatccataaaaatgaagtactgatgcatgctacaatttggagattcaaaatatgaagctaagtgaaagaagccagacccaaaggtcacgtattgtataattacgttgatataaaatgtcgagcagctggaaatccacagagatagaaagcagattgatggttgcctggggctgagcaggggtagggagaggagagggactgctccgtggaatggggttcctttcagggtgatgaaaatctttgggaactagaggcggctgttgcaacaacaaaaatctactaaatgccgcagagttgtatatatatatatatatatatatatatatatatatatatatattttttttttttttttttgggacagagtttcactcttattgcccaaggctggagtgaaatggtgtattctcgagtctctgcaacactctgactcatcagtttcaagtgattagcctgcctcagccccccaagtagctgggattacaggtgcccaccacaatacctggctaatttttctgtatttttagtagagatggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcggccctctaaagtgctgggattataggcatgagccactgcacccaacctagagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103212685 1144 - 106955855 gtacagt-atagcttatctttccaggtacagtctccccagcccatcagacacaaatgcatatctgattattcccccgcccaattttgtctatgtttatcttacgtaaaatgcaaattcactgcatttttttcctctgccccatttgtttttgtcgtctgatgtaaaaagtgcagattcactgagccaaacaaaggcatgaatgactatttgtaaaaaaaatacagattcactgagctagataaaggcatgcgtaactatttttccttagcctcctctgacatgaaaattgtgtacttctcaatatctctccctttaccctttaaatttggagccctcaaaatcatcttcagagaaaggcatagatctgtctccccggcacatctttaactttggcaaataaatctcctgaaatgac-agagacttgtctcgtTGGACAATATCcaaacacttgtacccacgtgtttatagaagcattattcacaat-gaaagataaaagtatcacaaatgtccaccaaccaatgtgttgcatccatatgttagaaatttactcatccataaaaatgaag-actgatgcatgctacaatttggagattcaaaatatgaagctaagtgaaagaagcctgacccaaaggtcacgtactgtatgattacattgatataaaatgtccagcagctggaaatccac------agaaagcagactgatggttgcctggggctgaggaagggtggggagaggagagggactgccccgtggaatggggttcctttcagggtgatgaaaatctttgggaactagaggtggcagttgcaacagtgaaaatctactaaatgc--cagagttgtatactt--------------------------------------------ttttttcttgagacggagtttcactcttattgccc-tggctggagtgcaatggtgcgttctcgagtctctacaac-ctccacctc-tcaggttcaagcgattcgcctgcctcagccccccaagtagctgggattacaggtgcccaccacaacacctggctaatttttctgtatttttagtagagacggagtttcaccatgttgaccaggctagtcttgaactcctgacctcaggtgatcagcccgcctcggccccccaaagtgctgggattataggtatgagccactgtgcccagcctagagt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 47661048 78 + 51301725 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=8052.000000 s hg38.chr19_GL949753v2_alt 408323 12 + 796479 tgtatacttt--------ta s panTro4.chr19 59603000 12 + 63644993 tgtatacttt--------ta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56519577 12 + 60714840 tgtatacttt--------ta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103213829 12 - 106955855 tgtatacttt--------ta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 3761753 20 - 51301725 TGTGTACTTTACAATGTGTA i papAnu2.chr19 T 41526 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e macFas5.chr19 55584404 2201 + 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=216746.000000 s hg38.chr19_GL949753v2_alt 408335 298 + 796479 aagggtcaattttacattatctgtattttacttcagtGAATGGAAATTTAAGAAAAAAGAGCATGGTTCTATGCAGATTTCTTTTATCTTAAAAAGTTGCAACATGACCCAGTGTT--TTTTTT------------------------TTTTAATGTGAGGTAGGATTCCTAATAAGTGAGAGACGTCCT----AAGTCCCACAGTGTTCAGACATGAAGCTGATCTTTTCACCTTACATCTTAAATTCTAATGTGGCT---GAGTACAGAATTCGGGATGAGCTCCAGGATTCCTGCAGTCTGTAACTTTTTCTGACACTTTACCATTCC s panTro4.chr19 59603012 300 + 63644993 aagggtcaattttacattatctgcattttacttcagtGAATGGAAATTTAAGAAAAAAGAGCATGGTTCTATGCAGATTTCTTTTATCTTAAAAAGTTGCAACATGACCCAGTGTTGGTTTTTT------------------------TTTTTATGTGAGGTAGGATTCCTAATAAGTGAGAGATGTCCT----AAGTCCCACAGTGTTCAGACATGAAGCTGATCTTTTCACCTTACCTCTTAAATTCTAATGTGGCT---GAGTACAGAATTAGGGATGAGCTCCAGGATTCCTGCAGTCTGTAACTTTTTCTGACACTCTACCATTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56519589 318 + 60714840 aagggtcaattttacattatctgtattttacttcagtGAATGGAAATTTAAGAAAAAAGAGCATGGTTCTATACAGATTTCTTTTATCTTAAGAAGTTGCAACATGACCCAGGGTGgttttttt-ttgttttgttttgttt-----tgttttAATGTGAGTTAGGATTCCTAATAGGTGGGAGATGTCCT----GAGTCCCTTAGTGTTCAGACATGAAGCTGATCTTTTCACCTTACATCTTAAATTCTAATGTGGCT---GAGTACAGAATTCAGGATGAGCTCCAGGATTCCTGCAGCCTGTAACTTCTTCTGATACTCTACCATTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103213841 318 - 106955855 aagggccaattttacattatctgtattttactttaatAAACGGAAATTTAAGAAAAAAGAGCACGGTTCTATGCAGATTTC----ATCTTAAGAAGTTGCAACATGACCCAGGGtt--ttttttgttgtttgtttttgtttttgtcttttttAATGTGAGGTAGGATTTGTAACAGGTGAGAGATGTCCT----AAGTCCCATAGTGTTAAGACATGAAGCTGATCTCTTCACCTTACATCTTAAATTCTAATATGACT---GAGTACAGAATTCAGGATGAGCTCCAGGATTCCTGCAGCCTGTAACTTTTTCTGACACTCTACCATTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3792768 288 - 59248254 aatggtccattgtatgttatgggaatttagctcaaATGA---GAAAGACAGGAAAAAGAGAAATGGTTCCCTGTAAATTCCTCACTCCAGAAGAAGTTGCACTGCAGTCCAGGGTG--------------------------------TGTTTGTGTGAGGTACGATTCCCACCAGGTT--AGGAGTCCCACCGAAGTCCCACAGTGCCCAAGCCTT-GGCCCAGTGATGAAATGTAC-----AAATAGTGATGTGGCTTCAGAGAATGGCATCTGGGATGAGCACCGGGATTCCTGCGTTCTATAAGCCTTTGCAGTCCCCTGCCATTCC i macFas5.chr19 T 44204 I 485 s papAnu2.chr19 3761773 288 - 51301725 -ATGGGCCATTGTATGTTATGGGAATTTAGCTCAATtga---gaaagacaggaaaaagagaaatggttCCCTGTAAATTCCTCACTCCAGAAGAAGTTGCACTGCGGTCCAGGGTG--------------------------------TGTTTGTGTGAGGTACGATTCCCACCAGGTTA-AGAAGTCCCACCGAAGTCCCACAGTGCCCAGGCCTT-GGCCCAGTGATGAAATGTAC-----AAATAGTGATGTGGCTTCAGAGAATGGCATCCAGGATGAGCACCGGGATTCCTGCGTTCTATAAGCCTTTGCAGTCCCCTGCCATTCC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=21644.000000 s hg38.chr19_GL949753v2_alt 408633 34 + 796479 ACCCGTGATGACGGATTGTTCCTGACTTACCTTT s panTro4.chr19 59603312 34 + 63644993 ACCCGTGATGACGGATTGTTCCTGACTTACCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56519907 34 + 60714840 ACCCGTGATGACGGATTGTTCCTGACTTACCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214159 34 - 106955855 ACCCGTGATGACGGATTGTTCCTGACTTACCTTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 3762061 34 - 51301725 TCTCAGAGTGGAACACTGCTTCTCATTGACCTCT i papAnu2.chr19 C 0 I 735 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e macFas5.chr19 3793056 485 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=22046.000000 s hg38.chr19_GL949753v2_alt 408667 44 + 796479 GGAACATAAAGGCTCTTACACCACGTGTCTGGATCTGGTAAAAG s panTro4.chr19 59603346 44 + 63644993 GGAACATAAAGGCTCTTACACCACGTGTCTGGATCTGGTAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56519941 44 + 60714840 TGAACATAAAAGCTCTTACACCACCTGTCTGGATCTGGTAGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214193 44 - 106955855 TGAACATAAAGGCTCTTACACCATGCGTCTGGATCTGGTAAAAG i nomLeu3.chr10 C 0 I 303 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 3762095 735 - 51301725 I e macFas5.chr19 3793056 485 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=37130.000000 s hg38.chr19_GL949753v2_alt 408711 69 + 796479 AGATTACACGAGATtgagagccttacatgtctcaggcaatactcatcctcaaaccaaccctgagatatg s panTro4.chr19 59603390 69 + 63644993 AGATTACACGAGATtgagagccttacatgtctcaggcaatactcatcctcaaaccaaccctgagatatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56519985 69 + 60714840 GGATTACAGGAGATtgagagccttacatgtctcaggcaatactcatcctcaaaccaaccctgagatacg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214540 69 - 106955855 aaaTTACATGAGATtgagagccttacatgtctcaggcaatactcatcctcaaaccaaccctgagatacg i nomLeu3.chr10 I 303 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 3762095 735 - 51301725 I e macFas5.chr19 3793056 485 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=1205.000000 s hg38.chr19_GL949753v2_alt 408780 2 + 796479 gg s panTro4.chr19 59603459 2 + 63644993 gg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520054 2 + 60714840 ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214609 2 - 106955855 gg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 3762830 2 - 51301725 GA i papAnu2.chr19 I 735 I 3 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e macFas5.chr19 3793056 485 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=205528.000000 s hg38.chr19_GL949753v2_alt 408782 229 + 796479 tcattatcttcttctataaggaggaaaatgggaaagaggtgttacatgatcaaggtcaaccatcagtaaatTCCACCCTCATGTCTTACATTAACACCTGTTCATTTCCTCCAGGGATCACTCTTGCCCAAAGCATGGAGACAGAATCCATGGTATCAGCTG-AGGGCTGTGAGCAGGGAAGAAAAGAGGTAGTAAGGAAGGAGAAATGACTCAGATGTTTTGACAGAGA s panTro4.chr19 59603461 229 + 63644993 tcattaatttcttctacaaggaggaaaatgggaaagaggtgttacatgatcaaggccaaccatcagtaaatTCCACCCTCGTGTCTTACATTAACACCTGTTCATTTCCTCCAGGGATCACTCTTGCCCAAAGCATGGAGACAGAATCCATGCTATCAGCTG-AGGGCTGTGAGCAGGGAAGAAAAGAGGTAGTAAGGAAGGAGAAATTACTCAGATGTTTTGACAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520056 229 + 60714840 tcattatcttcttctacagggaggaaaattggaaagagctgttacatgaccaaagtcaaccatcagtaaatTCCACCCTCATGTCTTACATTAACACCTGTTCATTTCCTTCAGGGATCACTCTTGCCCAAAGCATGGAGACAGAATCCATGCTATCAGCTG-AGGGCTGTGAGCAGGGAAGAAAAGAGGTAGTAAGGAAGCAGAAATGACTCAGATGTTTTGACAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214611 228 - 106955855 tcattatcttcttctacaaggaggaaaatgggaaagaggtgttacatgatcaaggtcaaccatcagtaaAGTCCACCCTCACGTCTTACATTCACACCTG-TCATTTCCTCCAGGGATCACTCTTGCCCGAAGCATGGAGACAGAATCCATGCTATCAGCTG-AGGGCTGTGAGCAGGGAAGAAAAGAGGTAGTAAGGAAGCAGAAATGACTCAGATGTTTTGACAGAGA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3793541 224 - 59248254 TCATCATCT--TTCTAC-ATGAGGAGAAT-GGTGAGGGATGTTACCTGCTGAAGCTCGACTGTCCGT-AATATGGCTTCCGTGTCTTACGCTGAAACCTGTGAATTTCCTCCAGTGTTTGCTCTCGCTAAAAGCGTGGAGGCAGAATCCACAGCATCAGATGCAGAGTTCCAGGCAGTG-GGAGAAGAAGTAGTGAGGAGATAGAAATGAATCAGAGGTGTTAAAGGAGA i macFas5.chr19 I 485 I 5972 s papAnu2.chr19 3762835 225 - 51301725 TCATCATCT--TTCTGCAATGAGGAGACT-GGTGAGGGATGTTACCTGCTGAAGCTCGACTGTCCGT-AATATGGCCTCCATGTCTTACGCTGAAACCTGTGAATTTCCTCCAGTGTTTGCTCTCGCTAAAAGCGTGGAGGCAGAATCCACAGCATCAGATGCAGAGTTCCAGGCAGTG-GGACGAGAGGTAGTGAGGAGGTAGAAATGAATCAGAGGTGttaaaggaga i papAnu2.chr19 I 3 I 5886 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=218371.000000 s hg38.chr19_GL949753v2_alt 409011 547 + 796479 GTGACCCTGTTTGCCCCAAGAACACTTGCGGGTTACAGTCCTAATCTTACCCCCAAAGtgttcccagaccaaactgagggtggggctgctatttctcatggcccaataatgagatgcggatgaactggggagggagagagtttttatttctgttaccggttacagggagaaggcctggaaaacattgccagaccaactcaaaattacaaagtttcccagagcttatataccttctaagctatTTATTAAAAAATGCAGCTATTTTCTAAGCTATCTTctaagctaagctaagaagatagctaagcttcttctaagctaagctaagaagatagctaagcttcttctaagctaagctaagaagatagctaagcttcttctaaactatctaagctagataagcttccaaactatcttctaataagtttagaagattctaagccattaagctacctaagctatagtcttctaagctatcttctaatcttctaagcttagaagcttagctatctaaactaagctaagatattctaagctTCTAATAT-CCATC s panTro4.chr19 59603690 466 + 63644993 GTGACCCTGTTTACCCCAAGAACACTTGCGGGTTACAGTCCTAATCTTACCCCCAAAGtgttcccagaccaaactgagggtcgggctgctatttctcatggcccaataatgagatgcggatgaactggggaggaagagagtttttatttctgttaccggttacagggagaaggcctggaaaatatcgccagaccaactcaaaattacaaagtttcccagagcttatataccttctaagctatTTATTAAAAAATGCAGcta-------agctattttctaagcta------------------------------------------------------tcttctaagctaagctaagaagatagctaaacttcttctaagctatctgagctagataagcttccaagctatcttctaataagtttagaagattctaagccattaagctatctaagctatagtcttctaagct--------------------tagaagcttagctatctaaactaagctaagatattctaagctTCTAATAT-CCATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520285 487 + 60714840 GTGACCCAGTTTGCCCCAAGAACACTTGCAGGTTACAGTCCTAATCTTACCCCCAAAGtgttcccagatcaaactgagggtcgggctgctatttctcatggcccagtaatgagatgcagatgaactggggaggaagagagtttttattcctattaccggttacagggagaaggcctggaaaatatcgccagaccaactcaaaattacaaagtttcccagagcttataaaccttctaagctatTTATTAAAAAATGCAGcta-------agctattttctaagcta------------------------------------------------------tcttctaagctaagctaagaagatagctaagcttctttgaagctatctaagctagataagcttccaagctatcgtctaataagtttagaagattctaagctattaagctatctaagctatagtcttctaagctatcttctaatcttctaagcttagaagcttagctatctaaactaagctaagatattctaagctTCTAATATCCCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103214839 441 - 106955855 GTGACCGTGTTTGCCCGAAGAACACTTGCGGGTTACAGTCCTAATCTTACCCCCAGAGtgttcccagaccaaactgagggctgggctgctatttctcatggcccaataatgagatgtggatgaactggggaggaagagag-ttttgtttctgtaatgggttacagggagaaggcctggaaaatattgccagaccaactcaaaattacaaagtttcccagagcttatataca-tctaagctatttgtTAAAAAATGCAGcta-------agctattttctaagcta------------------------------------------------------tcttctaagctaAGCTAAGAAGATGGTTAAGCTTCTTCTAAGCCATCTAAGCTAGATAAGCTTCTAAGCTATCTTCTAATAAGCTTAGAAGCTTC--------TAAGCTATCTAGGCTATAATCTTCTAAGATATCTT-----------------------------------CTAAGCTAAGATATTCTAAGCTTCTAATAT-CTATC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 3763060 5886 - 51301725 I e macFas5.chr19 3793765 5972 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=188933.000000 s hg38.chr19_GL949753v2_alt 409558 186 + 796479 TTTCACATCACCCATTTCCTGCACGGGATATGGCACGCCA-------GAGACCCAGGGGATGTTTTCTGCATGAAT--CTAGT------------------AATAAACAAATACCTGCATCCCTCAGGGCTGATAAAGAGTCTATAAACCTCAGATGGAGAGTCTAGAATGTTAGAACATAAACCAGGGAATGTGTCAGATGCCTAAGGACCT s panTro4.chr19 59604156 186 + 63644993 TTTCACATCACCCATTTCCTGCACGGGATATGGCATGCCA-------GAGACCCAGGAGATGTTTTCTGCATGAAT--CTAGT------------------AATAAACAAATACCTGCATCCCTCAGGGCTGATAAAGAGTCTATAAACCTCAGATGGAGAGTCTAGAATGTTAGAACATAAACCAGGGAATATGTCAGATGCCTAAGGACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520772 186 + 60714840 TTTCACATCACCCATTTCCTGCACAGGATGTGGCGTGCCA-------GAGACCCAGGAGATGTTTTCTGCATGAAT--CTAGT------------------AATAAACAAATACCTGCATCCCTCAGGGCTGATAAAGAGTCTATAAACTTCAGATGGAGAGTCTAGAATGTTGGAACATAAACCAGGGAATGTGTCAGATGCCTAAGGACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103215280 186 - 106955855 TTTCACATCACCCATTccctgcacaggatgtggcacgcca-------gagacccaggagatgttttctgaatgaat--CTAGT------------------AATAAACAAATACCTGCATCCCTCAGGGCTGATAAAGAGTCTATAAACCTCAGATGGAGAGTCTAGAATGTTAGAACATAAACCAGGGAATGTGTCAGATGCCTAAGGACCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3799737 202 - 59248254 TTCCACATCACCTGTTTCCTGTACAGGATGTGGCACATCAGAGTCCCGAGTCCCAGGAGGTG-TTGCTGAGTAAATACCTGAG-------aaaaaaaaaagaaaaaaaaaaTGCCGGCATCCCTCCAGGCTGATA---AGTCTCTAAGCCTGAGATGGGGAGCCCAGAACTTTGGAAAGTAAATCAGGGAATATGTCAGATGTCCAAGGACCT i macFas5.chr19 I 5972 C 0 s papAnu2.chr19 3768946 209 - 51301725 TTCCACCTCACCTGTTTCCTGTACAGGATGTGGCACATCAGAGTCCCGAGTCCCAGGAGATG-TTGCTGAGTAAATacctgagaaacaaaaaaaaaaagaaaaaaaaaaaatgccggcATCCCTCCAGGCTGATA---AGTCTCTAAGCCTGAGATGGGGAGCCCAGAACTTTGGAAAGTAAATCAGGGAATATGTCAGATGTCCAAGGACCT i papAnu2.chr19 I 5886 C 0 e canFam3.chr1 19907241 59534 - 122678785 T e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=52074.000000 s hg38.chr19_GL949753v2_alt 409744 41 + 796479 TCACAGCAATTCTAGCAATTCTTCATAAAAGCAGCTGTCAT s panTro4.chr19 59604342 41 + 63644993 TCACAGCAATTCTAGCAATTCTTCATAAAAGCAGCTGTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520958 41 + 60714840 TCACAGCAATCCTAGCAATTCTTCATAAAAGCAGCTGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103215466 41 - 106955855 TCACAGCAATTCTAGCAATTCTTCATAAAAGCAGCTGTCAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3799939 41 - 59248254 TCAAGAAAATGTTAACAATGATTCGTAAAAACAGGTATTAT i macFas5.chr19 C 0 I 321 s papAnu2.chr19 3769155 41 - 51301725 TcaagaaaatgttaacaatgatTCGTAAAAACAGGTATTAT i papAnu2.chr19 C 0 I 329 s canFam3.chr1 19847707 41 - 122678785 TCTCAGCAATCCTAACAGTAATCTATAAAAGCAGCTATCAT i canFam3.chr1 T 59534 C 0 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=515914.000000 s hg38.chr19_GL949753v2_alt 409785 440 + 796479 TTACTGAGCA----TAGTTCATCAGGTTATCTCTAGGCATATA------------------------ATGAAAATAA---------TA-------------------ATCATAGTAa------aaaatagcccacattattgaatgactgctaagaacatggtaga-atttcactttgtacatcacatgtattaactatgtagttccccaccaaaa--ccatgtaaggtagatactagcactatactaagtttatatatgacacaatagca--atgtgggtaactttccctaactcacgaagttaaaaggggcagagctgtgatcaaatctcaggcttcctggctccagagtcttccctgttagttcaacTGATTGCTTCCTATGAGAGGTAGAATATAATAATCTCTGATTGtcaacccaccaaatatccttacaaagaagacatttttattattgcaattttatagaaaagcaaagtgagcctcagagaggcaaagtgactttcc s panTro4.chr19 59604383 440 + 63644993 TTACTAAGCA----TAGTTCATCAGGTTATCTCTAGGCATATA------------------------ATGAAAATAA---------TA-------------------ATAATAGTAa------aaaatagcctacattattgagtgactgctaagaacatggtaga-atttcactttgtacatcacatgtattaactatgtagttccccaccaaaa--ccatataaggtagatactagcactatactaagtttatatatgacacagtatca--atgtgggtaactttccctaagtcacgaagttaaaaggggcagagctgtgatcaaatctcaggcttcctggctccagagtcttccctgttagttcaactgATTGCTTCCTATGAGAGGTAGAATATAATAATCTCTGACTGTCAACCCACCAaatatccttacaaagaagacacttttattattgcaattttatagaaaagcaaagtgagcctcagagaggcaaagtgactttcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56520999 446 + 60714840 TTACTGAGCA----TAGTTCATCAGGTTATCTCTAGGCATata------------------------atgaaaataa---------ta-------------------ataataataatagtaCAAaatagcctacattattgagtgactgctaagaacatggtaga-atttcacttcgtacatcacatgtattaactatgtagttccccaccaaaa--ccatataaggtagattctagcactatactaagtttatatatgacacaatagca--atgtgggtaactttccctaagtcacatagttaaaaggggcagagctgtgatcaaatctcaggcttcctggctccagagtcTTCCCTATTAGTTCAACTGCTTGCTTCCTATGAGAGGTAGAATATAATAATCTCTGATTGtcaacccaccaaatatccttacaaagaagacacttttattactgcaattttatagaaaagcgaagtgagcctccgagaggcaaagtgactttcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103215507 446 - 106955855 TTACTGAGCA----TAGTTTATCAGGTTATTTCTAAGCATata------------------------atgaaaataa---------ta-------------------ataataataatagtaaaaaatagcttacattattgagtgactgctaagaacatggtaga-atttcactttgtacatcacatgtattaattatgtagttccccaccaaaa--ccatataaggtagatactggcactatactaagtttatatatgacacaatagta--atgtgggtaactttccctaagtcacatagttaaaagggacagagccgtgatcaaatctcaggcttcctggctccagagtcTTCCCTATTAGTTCAACTGCTTGCTTCCTATGAGAGGTAGAATATAATAATCTCTGATTGTCAACCCACCAaatatccttacaaagaagacacttttaatattgcaattttatagaaaaccaaagtgagcctcagggaggcaaagtgattttcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3800301 463 - 59248254 TTACTGAGCA----AAGTTTATCAGGCTCTGTCTAGCCACATA------------------------ATAATGACAATGACAATATTATTATCATTTTTAGAGTAATATTATAGTAGCAATa-acaatagcccacattattcggtaagt-ctaacaacatgttcaa-attttactttgcacgtcacatgtattaactatgtagttctctaccaaaactctatataaggtaagtactagcattgtcctcattttataaatgacaaaatggaatcatgtgggtagcttttcctaaatctcatagttttcagggacaaagcaatgatcatatcccagccttcccggctccagagccttccctcctagctaAAC-------------GGAGAGGCAGAATATAATAATCCCTGATCATCCatcttccaaacatccttacaaagcagacagcattcttagtgccattttatggaaaagcgaagtgagtctcagacaggtaatgtgactttcc i macFas5.chr19 I 321 C 0 s papAnu2.chr19 3769525 450 - 51301725 TTACTGAACA----AAGTTTATCAGGCTCTGTCTAGCcacata------------------------ataatgataa---------tattatcatttttagagTAATATTATAGTAGCAATA-ACAATAGCCCACATTATTGGGTAAGT-CTAACAACATGTTCAA-ATTTTACTTTGCACGTCACATGTATTAACTATGTAGTTCTCTACCAAAACTCTATATAAGGTAAGTACTAgcattgtcctcattttataaatgaccAAATTGAATCATGTAGGTAGCTTTTCCTAAATCTCACAGTTTTCAGAGACAAAGCAATGATCATATCCCAGCCTTCCCAGCTCCAGAGCCTTCCCTCCTAGCTAAAC-------------GGAGAAGCAGAATATAATAATCCCTGATCATCCATCTTCCAAACATCCTTACAAAGCAGACAGCATTCTTAGTGCCATTTTATGGAAAAGTGAAGTGAGTCT----CAGGTAATGTGACTCTCC i papAnu2.chr19 I 329 C 0 s canFam3.chr1 19847748 441 - 122678785 -TCCCAAACACAGGCAGTTTATCAGGCTGTGTCTAGGCATATAACCTCTAGGGtgatgatgatgatgatgatgatga---------tg-------------------atggtaataatgGTA-GGAATGGCTCTCTTTTTTGCAtgagtgctaactatatgtgaggcattttactgcatgcatcacacatagaaactgttcagtttcttaccaaaa--ctctacaaagtaggttctagtattatcctcattctatagatgacaacacagaggcatgagggtgattttccctaagtcacatagttaat-ggaacagaactactatcaaatccacggctgcctggctccagatcctgtcctcATTGCTAAACTTTTTGCCTTTTGTGAAAGGCGGAGTATAATAATCTCTGGCCATCAATCTTCCAAAC-------------AGTCACCattatcattgctatgttacaggaaagaaaagtgaacctcc-------------------- i canFam3.chr1 C 0 I 60 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=40886.000000 s hg38.chr19_GL949753v2_alt 410225 45 + 796479 caaggagacagagatagcaagaggcagatgtaggttttgaaagta s panTro4.chr19 59604823 45 + 63644993 caaggagacagagatagcaagaggcagatgtaggttttgaaagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521445 42 + 60714840 caaggagacagagatagcaaggggc---TATCTTTTTTTAAAGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103215953 45 - 106955855 caaggagacagagatagcaagaggcagatgtaggttttgaaAATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3800764 44 - 59248254 caagcacatagagatagcaag-ggcagatccaggttttgaaggca i macFas5.chr19 C 0 n 0 s papAnu2.chr19 3769975 44 - 51301725 CAAGCACATAGAGATAGCAAG-GGCAGATCCAGGTTTTGAAGGCA i papAnu2.chr19 C 0 I 494 e canFam3.chr1 19848189 60 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=32773.000000 s hg38.chr19_GL949753v2_alt 410270 71 + 796479 ctgtgatgtaactccaagcctgtTGCtttttttttttttttt-----gagaccgagtcttactctgttgcccaggc s panTro4.chr19 59604868 75 + 63644993 ctgtgatgtaactccaagcctgtTGCtttttttttttttttt-ttttgagatggagtctcactctgtcacccaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521487 76 + 60714840 CTGTGATGTAACTCCAAGCCTGTTGCtttttttttttttttttttttgagatggagtcttgctctcttgcccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103215998 70 - 106955855 CTGTGATGTAACTCCAAGCCTGTTGCttttttttttttttt------gagacagagtcttgctctgtcgcccaggc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19848189 60 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e papAnu2.chr19 3770019 494 - 51301725 I e macFas5.chr19 3800808 0 - 59248254 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=133149.000000 s hg38.chr19_GL949753v2_alt 410341 120 + 796479 tggagtgcagt--cacgtgatctcagctctctgcaagctctgcttcctgggttcataccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccacgactggctaa s panTro4.chr19 59604943 119 + 63644993 tagagtgcagtggcac---atctcagctcactgcaagctccgcctcccaggttcatgccattctcctgcctcagcctcctgagtagctgggactacaggcacccaccaccacgcctggctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521563 120 + 60714840 tggagtgcagtggtgc--gatctcagctcactgcaagctctgcctcccaggttcaccctattcacctgcctcagcctcccgactagctgggactacaggcacccgccaacactactggctaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103216068 120 - 106955855 tggggtgcagtggtgt--gatctcagctcactgcaagctctgcctcccgggttcacgccattctccttcctcagcctcccatgcagctgggactacaggcgcctgccaccatgactggctaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55586605 120 + 59248254 taaagtgcagtggcgc--gatctcagctcactacaagctctgtctcccgggttcacggcattctcctgcctcagcctcccaagtagctgggactacaggcgcccgtcaccacgcctggctaa i macFas5.chr19 I 2201 C 0 s papAnu2.chr19 47661126 120 + 51301725 taaagtacagtggcgt--gatctcagctcactacaagctctgtctcccgggttcacggcattctcctgcctcagcctcccaagtagctgggactacaggcacccatcaccacgcctggctaa i papAnu2.chr19 I 78 C 0 e canFam3.chr1 19848189 60 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47343226 1657 + 50890351 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=131886.000000 s hg38.chr19_GL949753v2_alt 410461 102 + 796479 ----------ttttcttttttttttttttttttgtatttttgg-tggagacagggtttcactatattagccaggatggtctccatctcctgacctcatgatcatccctcctca s panTro4.chr19 59605062 89 + 63644993 ----------tttt-------------ttttttgtatttttag-tggagacggggtttcactgtattagccagggtggtcctgatctcctgacctcgtgatccgcccgcctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521683 91 + 60714840 ----------tttt-----------ttttttttgtatttttag-tggagacggggtttcaccatattagccagaatggtcttgatctcctgacctcatgatccgccctcctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103216188 91 - 106955855 ----------tttt-----------ttttttttgtatttttgg-tggagacggggtttcgccatattagccaggatggtcttgatctcctgacctcgtgatcagccctcctca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55586725 93 + 59248254 --------ttattt-----------tttattttttatatttag-tgaagacagggtttcaccgtattagccaggatggtcttgatctcctgacttcgtgatcctcccacctcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47661246 93 + 51301725 --------ttattt-----------tttattttttatatttag-tggagacggggtttcaccgtattagccaggatggtcttgatctcttgacctcatgatcctcccacctcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47344883 102 + 50890351 tttttttttttttt-----------ttttttttttttttttagttggagacagggtttcaccgtattagccaggatggtcttgatctcctgacctcgtgatctgcccgcctca i chlSab2.chr6 I 1657 C 0 e canFam3.chr1 19848189 60 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e rheMac3.chr19 60485119 2407 + 64156825 I a score=71621.000000 s hg38.chr19_GL949753v2_alt 410563 30 + 796479 gcctcccaaagtgctgggattacaggcgtc s panTro4.chr19 59605151 30 + 63644993 gcctcccaaagtgctgggattacaggcgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521774 30 + 60714840 gcctcccaaagtgctgggatcacaggcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103216279 30 - 106955855 acctcccaaagtgttgggattacaggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60487526 30 + 64156825 gccccccagagtgctgggattacaggcgtg i rheMac3.chr19 I 2407 C 0 s macFas5.chr19 55586818 30 + 59248254 gccccccagagtgctgggattacaggcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47661339 30 + 51301725 gcctcccagagtgctgggattacaggcgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47344985 30 + 50890351 gcttcccaaagtgctgggattacaggtgtg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19848189 60 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I a score=1086814.000000 s hg38.chr19_GL949753v2_alt 410593 449 + 796479 agccactgtg-tctggccCCAAGCCTGTTGCTTTTTAGTCAATACCCTATAAACTGGTTTCCTGAACATGGTCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAGCCAACTCTAAATGCCACCCTGGGCCGTGCTAGTGGTTGTCCTGCTGGGTGAGCGGCTAACATCATAAGCTTCTGAATTCCATTCCTATTCAGAATCCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACACCTTCAG--GGAATCTCTATTTAGGA-----------GTCTCTAAGAGGGGGCCC--------------------------------------------------------------------------------AGCTCATACAAATG-TATCAA------------------------------CTAACACACCAGA----AAACAGT-GGAAGCCTTGTTGCTTCCTGGACTCTGACCATGGTGCTGAAACTAGAGTTCATGGCAACATCCCAGTCAGTGCTGTGGACAGCGACCACAGGAGCCACTCTCC s panTro4.chr19 59605181 448 + 63644993 agctgctgtg-tccggccCCA-GCCTGTTGCTTTTTAGTCAATACCCTACAAACTGGTTTCCTGAACCTGGTCTGGAAAGAGATGACCTGAGGTGGGTGAGGAAGAACCAACTCTAAATGCCACCCTGGGCCGCGCTAGTGGTTGTCCTGCTGGGTGAGCGGCCAACATCATAAGCTTCTGAATTCCATTCCTATTCAGAATCCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCGTCAG--GGAATCTCTATTTAGGA-----------GTCTCTAAGAGGGGGCCC--------------------------------------------------------------------------------AGCTCATACAAATG-TATCAA------------------------------CTAACACACCAGA----AAACAGT-GGAAGCCTTTTTGCTTCCTGGACTCTGACCATGGTGCTGAAACTAGAGTTCATGGCAACATCCCAGTCAGTGCTGTGGACAGCGACCACAGGAGCCACTCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56521804 448 + 60714840 agccactgtg-tctggccCCAAGCCTGTTGCTTTTTAGTCAATACCCTATAAACTGGTTTCCTGAACCTGGTCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAACCAACTCTAAATGCCACCCCGGGCCGTGCTAGTGGTTGTCCTGCTGGATGAGCAGCCAACATCATAAGCTTCTGAATTCCATTCCTATTCAGAATCCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCTTCAA--GGAATCTCTATTTAGGA-----------GTCTTTAAGAGGGGGCCC--------------------------------------------------------------------------------AGCTTATACAAATG-TAACAA------------------------------CTAACACACCAGA----AAACGG--GGAAGCTGTGTTACCTCCTGGACTCTGACCATGGTGCTGAAACTAGAGTTCATGGCAACATCCCAGTCAGTGCTGTGGACAGCGACCACAGGAGCCACTCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103216309 445 - 106955855 agccactgtg-tccggccCCAAGCGTGTTGCTTTTTAGTCAATACCCTATAAACTGGTTTCCTGAACCTGGTCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAACCAACTCTAACTGCCACCCTGGGCCGTGCTAGTGGTTGTCCTGCTGGGTGAGCAGCCAATATCATAAGCTTCTGAATTCCATTCCTATTCAGAATCCATGGA--GTGGATA----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGCCTCCTTCAG--GGAATCTC----TAGGA-----------GTCTCTAAGAGGGGGCCC--------------------------------------------------------------------------------AGCTTTTACAAATG-TATCAA------------------------------CTAACACACCAGA----AAACAGA-GGAAGCCATGTTACCTCCTGGACTCTGACCATGGTGCTGAAACTAGAGTTCATGGCAACGTCCCAGTCAGTGCTGTGAACAGCAACCGCAGGAACCATTCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60487556 447 + 64156825 aaccaccgtg-tccgtccCCAAGCCTGTTGCTTGTTAGTCAATACCCTATAAACTGGTTTTCTGAACCTGATCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAACCAACTTTAGATGCCACCCTGGGCCATGCTAGTGGCTGTCCTGCTGGGTGAGCGGCCAATCTCTTAAGCTTCTGAATTCCTTTCCTATTCAGAATTCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCTTTGG--GGAATCTCTATTTAGGA-----------GTCTCTAAAAGGGGGCCC--------------------------------------------------------------------------------AGCTTATACAAATG-TATCAG------------------------------CTA--ACACCAGA----AAACAGTGGGAAGCCGTGTTGCCTCCTGGACTCTGACCATGGTGCTGAAACTAGA-TTCAAGGCAACATCCCAGTCAGTGCTGTGGACAGCGACTACAAGAGCCACTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55586848 447 + 59248254 aaccaccgtg-tccggccCCAAGCCTGTTGCTTGTTAGTCAATACCCTATAAACTGGTTTTCTGAACCTGATCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAACCAACTTTAGATGCCACCCTGGGCCATGCTAGTGGCTGTCCTGCTGGGTGAGCGGCCAATCTCTTAAGCTTCTGAATTCCTTTCCTATTCAGAATTCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCTTTGG--GGAATCTCTATTTAGGA-----------GTCTCTAAAAGGGGGCCC--------------------------------------------------------------------------------AGCTTATACAAATG-TATCAG------------------------------CTA--ACACCAGA----AAACTGTGGGAAGCCGTGTTGCCTCCTGGACTCTGACCATGGTGCTGAAACTAGA-TTCAAGGCAACATCCCAGTCAGTGCTGTGGACAGCGACTACAAGAGCCGCTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47661369 447 + 51301725 aaccaccatg-tctggccccaAGCCTGTTGCTTGTTAGTCAATACCCTATAAACTGGCTTTCTGAACCTGATCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAACCAACTTTAGATGCCACCCTGGGCCATGCTAGTGGCTGTCCTGCTGGGTGAGCGGCCAATATCTTAAGCTTCTGAATTCCTTTCCTATTCAGAATTCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCTTTGG--GGAATCTCTATTTAGGA-----------GTCTCTAAAAGGGGGCCC--------------------------------------------------------------------------------AGCTTATACAAATG-TATCAG------------------------------CTA--ACACCAGA----AAACAGTGGGAAGCCGTGTTGCCTCCTGGACTCTGACCATGGTGCTGAAACTAGA-TTCAAGGCAACATCCCAGTCAGTTCTGTGGACAGCGACCACAAGAGCCACTCTCC i papAnu2.chr19 C 0 I 711 s chlSab2.chr6 47345015 449 + 50890351 agccactgtg-tccggccCCAAGCCTGTTGCTTGTTAGTCAATACTCTATAAACTGGTTTTCTGAACCTGATCTGGAAAGAGATGACCTGAGGTGGATGAGGAAGAGCCAACTCTAGATGCCACCCTGGGCCATGCTAGTGACTGTCCTGCTGGGTGAGCGGCCAATATCTTAAGCTTCTGAATTCCATTCCTATTCAGAATCCATGGA--GTGGATG----------------------------------TGTCTTTTTCCAATTTATTCT-------------GATGCATTCGCTAAATATTTATT--------------------------------------------------------------------------------------AGACTCCTTCGG--GGAATCTCTATTTAGAA-----------GTCTCTAAAAGGGGGCCC--------------------------------------------------------------------------------AGCTTATACAAACGTTATCAG------------------------------CTA--ACACCAGA----AAACAGTGGGAAGCCGTGTTGCCTCCTGGACTCTGACCATGGTGCTGAAACTAGAGTTCAAGGCAGCATCCCAGTCAGTGCTGTGGACAGCGACCACAAGAGCCACTCTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19848249 705 - 122678785 aaccagtttgatgtgcccccacgtctgttatctttTGGTC-ATACCCAAT-AGCTGATGCCCTGAACCTGGTCTGGTAAGAGACATTCTGAGGTAGAT-AGGGAGAGCTGACATTATATGACACCACGGGCTGTTCCAGTGTCTAGCATGCTGTGTGGG--GCCAACATCCTGAGCTTCTAAATTCTATCTCTGTTCAGGATGCACAGATTGTGAAGGGAGTCTGAATTAATGTCAACCATTGCTGTCCCCCTGTATTTTTCCAACTTACTCTCAAGCTCTGATGGAATATtttctttatttatttatttatttatttatttatttatttatttatttatgatagccacagagagagagagagagaggcgcagagacacaggcagagggagaagcaggctccatgtaccgggagcccgacgtgggattcgatcctgggtctccaggatcgcgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccTCTGATGGAATATTTTCTATTTGACTCCTGCATGGGGACTATATAGGAG-GACCAAAGGTGAGGGCGAGGGCTTGATGAGGCAAATTTGCCAAACCAGATGTCAGACTAT-GGTAACTTTTTGCCCTCAAAGACTCTGGCCATGTTACTGAAA-TGGA-TCAAAAGCCAAGTCCCGATCGGCACCATGGACAGCAACCACGGAGCCCACCTGAT i canFam3.chr1 I 60 C 0 e calJac3.chr22 45789733 125 + 49145316 I a score=619201.000000 s hg38.chr19_GL949753v2_alt 411042 276 + 796479 TGGGGCTGGGGCCTGATAGAGGAAATAGGAATGGTGTCTAGATACAGGGCCAGGTCTGTTGGAGACCTT--GAATAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTTGATGACGTCTAGCTGGACCATGGAATGTTGCTATCTAAATA--GGCAATTATTTTTGTACTCTACACCAGGGTAGGCAGACAGGAAGCCAAGAGGGAAGCATCCTGGAACTTCCTTCGTCATACAGAATACTGAGTTTCCTTGGCTGCTCATGAGTGTATATT s panTro4.chr19 59605629 276 + 63644993 TGGGGCTGGGGCCTGATAGACGAAATAGGAAGGGTGTCTAGATACAGGGCCAGGTCTGTTGGAGACCTT--GAATAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTAGATGACGTCTAGTTGGACCATGGAATGTTGCTATCTAAATA--GGCAATTATTTTTGTACTCTACACCAGGGTAGGCAGACAGGAAGCCAAGAGGGAAGCATCCTGGAACTTCCTTCGTCATACAGAATACTGAGTTTCCTTGGCTGCTCATGCGTGTATATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56522252 276 + 60714840 TGGGGCTGGGGCCTGATAGAGGAAATAGGAAGGGTGTCTAGATACAGGGCCAGGTCTGTTGGAGACCTT--GAATAGGAGCCAAAATTAAGCAGGATGTGGGGAAGCTCAAGAGATAGATGACGTCTAGTTGGACCATGGAATGTTGCTATCTAAACA--GGCAATTATTTTTGTACTCTACACCAGGGTAGGCAGACAGGAAGCCAAGAGGGAAGCATCCTGGAACTTCCTTGGTCATACAGAATGCTGAGTTTCCTCGGTTGCTTATGAGTGTATATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103216754 268 - 106955855 TGGGGCTGGGGCCTGATAGAGGAAATAGGAAGAGTGTCTAGATACAGGGCCAGGTCTGTTGGAGACCTT--GAATAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTAGATGACGTCTAGTTGGACCATGGAATGTTGCTATCTAAATA--GGCAATTATTTTTGTACTCTACACCAGGGTAGGCAGA--------CCAGAGGGAAGCACCCTGGAACTTCCCTGGTCATACAGAATACTGAGTTTCCTCAGTTGCTTGTGAGTGTATATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60488003 275 + 64156825 CGTGGCTGGGTCCTGATAGAGGAAATAGGAAGGGTGTCTAGATAC-GGGCCAGGTGTGTTGAAGACCTT--GAGTAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTAGATGACGTCTAGTTGGACCTTGGAATGTTGCTATTTAGATT--GACAATTATTTTTGTACTCTACACCAGGGTAGGCAGAGAGGAAGCCAAGATGGAAGCATCCTGGAACTTCCTTGGTCACACAGAATACTTAGTTTCCTCGGTTGCTTATGAGTGTATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55587295 275 + 59248254 CGTGGCTGGGTCCTGATAGAGGAAATAGGAAGGGTGTCTAGATAC-GGGCCAGGTGTGTTGAAGACCTT--GAGTAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTAGATGACGTCTAGTTGGACCTTGGAATGTTGCTATTTAGATA--GACAATTATTTTTGTACTCTACACCAGGGTAGGCAGAGAGGAAGCCAAGATGGAAGCGTCCTGGAACTTCCTTGGTCACACAGAATACTTAGTTTCCTCGGTTGCTTATGAGTGTATATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3770513 275 - 51301725 TTGGACTGCATCCAGACAGGGGAAATAGGAAGGGTGTCTAGATATAGGGCCAGATATATTGGGAACATTCAGAACAGGAGTCAGAACTTAGCAGGAGGTGGAGAAGCTCAAGGTGTAAACGATGCTCATATGGACCATGGAATCTTGACATCTGGAtaaggccatttttttttctgctgtacaCCAGAGTAGGCAGGGAGGCAGCAAAAATGGAATCACTCTGGTCTTGCCTTGGTAATAGAAAATAGTGTCTttca-----tgcacacgtatgtttatt i papAnu2.chr19 I 494 n 711 s chlSab2.chr6 47345464 276 + 50890351 CGTGGCTGGGTCCTGACAGAAGAAACAGCAAGGGTGTCTAGATACAGGGCCAGGTGTGTTGAAGACCTT--GAGTAGGAGCCAAAATTGAACAGGATGTGGGGAAGCTCAAGAGGTAGATGACGTCTAGAAGGACCATGGAATGTTGCTATCTAGATA--GGCAATTATTTTTGTACTCTACACCAGGGTAGGCAGAGAGGAAGCCAAGATGGAAGCATCCTGGAACTTTCTTGGTCACACAGAATACTGAGTTTCCTCGGTTGCTTATGAGTGTATATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19848954 262 - 122678785 GGGGGTTGGGTCCTG--GGATGAAATAAGCAGGATGTCTATACACAGGTCCGGGGGTGTTGGGGACTCC--CAA-AGGAG--ATAGTTTTGCAGTAGGCAGAGAAACTCAACATGTAGATGAGGATGAGATTGACCACAGAACGCTGTCATCCAGGGA--AACAATTTCTTTTCTACTGTACTCTGTGGCAGGTAGAGAGACAGCAAACATCAAAGCACCCTAGACTTGGTTTGGTCAT----AATGTGGTCCTTTC-----TGGATACAAGTGTACAGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45789733 125 + 49145316 I a score=25830.000000 s hg38.chr19_GL949753v2_alt 411318 11 + 796479 ATGAGTGCAAT s panTro4.chr19 59605905 11 + 63644993 ATGAGTGCAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56522528 11 + 60714840 ATGAGTGCAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103217022 11 - 106955855 ATGAGTGCAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60488278 11 + 64156825 ATGAGTGCAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55587570 11 + 59248254 ATGAGTGCAAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47345740 11 + 50890351 ATGAGTGCAAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19849216 11 - 122678785 CTAAGTGCGAT i canFam3.chr1 C 0 I 2922 e calJac3.chr22 45789733 125 + 49145316 I e papAnu2.chr19 3770788 711 - 51301725 I a score=226694.000000 s hg38.chr19_GL949753v2_alt 411329 135 + 796479 AAAGTTTGAGTGCGATTATCCCTTAGACTAAAATCTGTTTTTGCAAGAGTTTTCTTCAGAGAAATGGAACCAATCAGATGTTtatttatgtatatacctatcctctgtctatctagctatctgtttatttctcta s panTro4.chr19 59605916 133 + 63644993 AAAGTTTGAGTGCGATTATCCCTTAGACTAAAATCTGTTTTTGCAAGAGTT--CTTCAGAGAAATGGAACCAATGAGAtgtttatttatgtatatacctatcctctgtctatctagctatctatttatttctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56522539 133 + 60714840 AAAGTTTGAGTGCGATTATCCCTTAGACTAAAATCTGTTTTTGCAAGAGTT--CTTCAGAGAAATGGAACCAATCAGATGTTtatttatgtatatacctatcctctgtctatctatctatctatttatttctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103217033 125 - 106955855 AAAGTTTGAGTGCGATTATCCCTTAGACTAAAATCTGTTTTTGCAAGAGTT--CTTCAGAGAAATAGAACCAATCAGATGTTTATTTATGTGTATACCTATCCTCTGTCTCTCTA--------TCTATTTCTCTA i nomLeu3.chr10 C 0 I 126 s rheMac3.chr19 60488289 133 + 64156825 AAGGTTTGAGTGCGATTATCCCTTAAACTAAAATCTGTTCTTGCAAGAGTT--CTTCGGAGAAATGGAACTAACCAGATGTTTATTTATGTGTATACCTATCCTCTGTCTATGTAGCTATTTATTTATTTCTCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55587581 133 + 59248254 AAGGTTTGAGTGCGATTATCCCTTAAACTAAAATCTGTTTTTGCAAGAGTT--CTTCGGAGAAATGGAACTAACCAGATGtttatttatgtgtatacctatcctctgtctatgtatctatttatttatttCTCTA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47345751 133 + 50890351 AAGGTTTGAGTGCGATTATCCCTTAAACTAAAATCTGTTTTTGCAAGAGTT--CTTCGGAGAAATGGAACTAACCAGCTGTTTGTTtatgtatatacctatcatctatctatgtatctatttatttatttctcta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e papAnu2.chr19 3770788 711 - 51301725 I a score=124111.000000 s hg38.chr19_GL949753v2_alt 411464 99 + 796479 GGAATGTGCATTATGAATACAATATGGCCCCTcttactgtgggccaacgtttgttccatg-ttttagccaatgaaccagacaaactg-ttagagccatgtc s panTro4.chr19 59606049 99 + 63644993 GGAATGTGCATTATGAATACAATATGGCCCCTcttactgtgggccaacgtttgttccatg-ttttagccaatgaaccagacaaactg-ttagagccatgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56522672 101 + 60714840 GGAGTGTACATTATGAATGCGATATGGCCCCTcttactgtgggccaacttttgttccatgtttttagccaatgaaccagacaaactgtttagagccATGTC i ponAbe2.chr19 C 0 I 1435 s rheMac3.chr19 60488422 98 + 64156825 GGAGTGTACATTATGAGTACAATATGGCCCC-cttactgtgggccaacttttgttccatg-ttttagccaatgaaccagacaaactg-ttagagccatgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55587714 98 + 59248254 GGAGTGTACATTATGAGTGCAATATGGCCCC-cttactgtgggccaacttttgttccatg-ttttagccaatgaaccagacaaactg-ttagagccatgtc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47345884 98 + 50890351 GGAGTGTACCTTATGAGTGCAATATGGCCCC-cttactgtgggccaacttttgttccatg-ttttagccaatgaaccagacaaactg-ttagagccatgtc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e papAnu2.chr19 3770788 711 - 51301725 I a score=492135.000000 s hg38.chr19_GL949753v2_alt 411563 581 + 796479 tagctcactgagatgcaacattaaatgcaggatctctccttagtaggtccatatcaataacattggcctggctcaactttatcttcctttcaccattatccaacacccttaatgtccattcgcacacatgttccctagatttctaggtgtataaatcagaagaacttagtagtcactttggagtgtagcacatttccccatggatcacacattgaacctATggcttagaagcaaagatgggtagtgggggcggatcctgaggaaaattagcactgtcttgcatggcaactgcctccacggaggccactattgtttcctcagacagtgcagggttaatctcctcagatgcacggggagagaatgcttccattgtcaa-------agagcatgattaaggaactcactgtccttaccttcatcagtgtctttcacacatccctattccaaatgtcaagattccacaccttccgaatcaatacccttaaagtagacaccctttgaggctgggaattccatttgtattgtaatttagccacttgaagggtgagtttctgggtttgctttttctttttctttttttttttttt s panTro4.chr19 59606148 577 + 63644993 tagctcactgagatgcaacattaaatgcaggatctctccttagtaggtccatatcaataacattggcctggctcaactttatcttcctttcaccattatccaacacccttaatgtccatttgcacacatgttccctagatttctaggtgtataaatcagaagaacttagtagtcactttggagtgtagcacatttccccatggatcacacattgaacctATggcttagaagcaaagatgggtagtgggggcggatcctgaggaaaattagcactgtcttgcctggcaactgcctccgcggaggccactattgtttcctcagacagtgcagggttaatctcctcagatgcacggggagagaatgcttccattgtcaa-------agagcatgattaaggaactcactgtccttactttcatcagtgtctttcacacatccctattccaaatgtcaagattccacaccttccgaatcaatacccttaaagtagacaccctttaaggctgggaattccatttgtattgtaatttagccacttgaagggtgagtttctgggtttgctttttctttttctttatttttt---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60488520 588 + 64156825 tagctccctgagacacaacattaaatgcaggatctctccttagtaggtccatattaataacactggcctcgctcaactttatcttcctttcaccattgtccaacacccttaatgtccatttgcacacaggttccctagatttctatgtgcataaatcagaaaaacttagtaatcactttggagtgtagcacatttcctcatggatcacacactgaacctATggcttagaagcaaagatgggtagtgggggcggatcctaaggaaaactagcactggcttgcctggcaactgcctccaggggggccattactgttttctcagacagtgcagggttaatcttctcagatgcagggggagagaacacttccattgtcaaagaacagagagcagaatcaaggagttcactgtccttaccttcatcagggtctttcacacatccctattccaaatgccaagattccacaccttcccaatcaaggcccttgaagtagacacgctttgagactgagaattccatttgtattgtaatttagccacttgaagcatgagtttctgggtttgattttTCtttttcgttttttttttttt i rheMac3.chr19 C 0 I 677 s macFas5.chr19 55587812 588 + 59248254 tagctccctgagacacaacattaaatgcaggatctctccttagtaggtccatattaataacactggcctcgctcaactttatcttcctttcaccattgtccaacacccttaatgtccatttgcacacaggttccctagctttctatgtgcataaatcagaaaaacttagtaatcactttggagtgtagcacatttcctcatggatcacacactgaacctatggcttagaagcaaagatgggtagcgggggcggatcctgaggaaaactagcactggcttgcctggcaactgcctccaggggggccattactgttttctcagacagtgcagggttaatctcctcagatgcagggggagagaacacttccattgtcaaagaacagagagcagaatcaaggagttcactgtccttaccttcatcagggtctttcacacatccctattccaaatgccaagattccacaccttcccaatcaaggcccttgaagtagacacgctttgagactgagaattccatttgtattgtaatttagccacttgaagcatgagtttctgggtttgattttTCTTTTTCGttttttttttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47345982 588 + 50890351 tggctccctgagacacaacattaaatgcaggatctctccttagtaggtccatattaataacactggcctcactcaactttatcttcctttcgccattgtccaacacccttaatgtccatttgcacacatgttccctagatttccatgtgcataaatcagaaaaacttagtaatcactttggagtgtagcacatttcctcatggatcacacattgaacctatggcttagaagaaaagatgggtagtgggggcagatcctgaggaaaactagcactggcttgcatggcagctgcctccagggaggccattactgttttctcagacagtgcagggttaatctcctcagatgcagggggagagaacacttccattgtcaaggagcagagagcagaattaaggagctcactgtctttaccttcatcagagtctttcacacatccctattccaaatgccaagattccacaccttcccaatcaaggcccttgaagtagacaccctttgagactgggaattccatttgtaatgtaatttagccacttgaagcatgagtttctgggtttgAtttttctttttctttttctttctttc i chlSab2.chr6 C 0 I 47 e canFam3.chr1 19849227 2922 - 122678785 I e ponAbe2.chr19 56522773 1435 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e papAnu2.chr19 3770788 711 - 51301725 I a score=273.000000 s hg38.chr19_GL949753v2_alt 412144 1 + 796479 t s macFas5.chr19 55588400 1 + 59248254 t i macFas5.chr19 C 0 I 644 s chlSab2.chr6 47346617 1 + 50890351 t i chlSab2.chr6 I 47 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e ponAbe2.chr19 56522773 1435 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e papAnu2.chr19 3770788 711 - 51301725 I e rheMac3.chr19 60489108 677 + 64156825 I e panTro4.chr19 59606725 0 + 63644993 C a score=69666.000000 s hg38.chr19_GL949753v2_alt 412145 299 + 796479 gagacagagtcttgcccttgt-cccccaggctggaatgcaatggcacgatctcgactcactgcaacctccacctcctgagttcaagcaattctcctgcctcagcctcttgagtagctgggattacaggcaccagccaccacacctggctaatttttgtatttctagtagagacgggatttcgccaagttggccagactggtcacgaactcctgacctcacatgatctgcccacctcggcctcccgaagtgctaggattacaggcgtgagccaccgcacctggccccaggtttgacttttc s panTro4.chr19 59606725 297 + 63644993 gagacag--tcttgcccttgt-cccccaggctggaatgcaatggcacgatctcgactcactgcaacctccacctcctgagttcacgcaattctcctgcctcagcctcttgagtagctgggattacaggcacccgccaccacacctggctaatttttgtatttttagtacagacgggatttcgcgaagttggccagactggtcacgaactcctgacttcacatgatctgcccacctcggcctcccgaagtgctaggattacaggcgtgagccaccgcacctggccccaggtttgacttttc i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47346618 300 + 50890351 ttgacagggtctcactcttgtccccccaggctggagtgcagtggtgcgattttgactcactgcaacctccgcctcccgagtttaagcgattctcctgcctcagcctcttgagtagctgggattacaggcacctgccaccacacctggttaatttttgtagttttagtagagtcgaggtttcgccaacttggccaggcttgtctcaaactcctgacctcaggtgatctgtccaccttggcctcccaaagtgctgggatgacaggtgtgagccactgtgcctggccCTGGATTTGAtttttc i chlSab2.chr6 C 0 I 374 e canFam3.chr1 19849227 2922 - 122678785 I e ponAbe2.chr19 56522773 1435 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55588401 644 + 59248254 I e rheMac3.chr19 60489108 677 + 64156825 I a score=47557.000000 s hg38.chr19_GL949753v2_alt 412444 522 + 796479 aaaggcctcagccctgtggctacaaatgatgagtatcttttagggcagatatagaagtcttagctcatttatgtttgcacttgaactgaaaattcaaatctttgaattcatcctcttctttccccaactttgtccagtgacaacccagccaatctcattatgctcattagttttcaaaaacattcaaaagtattatgtacatgatcactcagattcttttttttttttttt-gagacggagtcttgctctgtcgcccaggctggagtgcagtggcatggtctccgctcactgcaagctccgcctcccaggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccacacctggctaatttttttgtatttt-ttttttttttaggaaagatggggtttcaccgtgctagctaggatggtctcgatctcctgacctcgtgatccacccgcctcggcgtcccaaagtgctgggattacaggggtgagccaccgcacccggcc s panTro4.chr19 59607022 524 + 63644993 aaaagcctcagccctgtggctacaaatgatgagtatcttttagggcagacatagaagtcttagctcatttatgtttgcacttgaactgaaaattcaaatctttgaattcatcctcttctttccccaactttgtccagtgacaacccagccaatctcattatgctcattagttttcaaaaacattcaaaagtattatgtacatgatcactcagattcttttttttttttttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggcatggtctccgctcactgcaagctctgcctcccaggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccacacctggctaatttttttgttttttgttttttttttaggaaagatggggtttcaccatgctagctaggattgtctcgatctcctgacctcgtgatccacccgcctcggcatcccaaagtgctgggattacaggcgtgagccaccgcacccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e ponAbe2.chr19 56522773 1435 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e chlSab2.chr6 47346918 374 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55588401 644 + 59248254 I e rheMac3.chr19 60489108 677 + 64156825 I a score=4584.000000 s hg38.chr19_GL949753v2_alt 412966 8 + 796479 cactcaga s panTro4.chr19 59607546 8 + 63644993 cactcaga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60489785 8 + 64156825 cactcaga i rheMac3.chr19 I 677 C 0 s macFas5.chr19 55589045 8 + 59248254 cactcaga i macFas5.chr19 I 644 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e ponAbe2.chr19 56522773 1435 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e chlSab2.chr6 47346918 374 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I a score=6482.000000 s hg38.chr19_GL949753v2_alt 412974 10 + 796479 ttcttataaa s panTro4.chr19 59607554 10 + 63644993 ttcttataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56524208 10 + 60714840 ttcttataag i ponAbe2.chr19 I 1435 C 0 s rheMac3.chr19 60489793 10 + 64156825 ttcttctaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55589053 10 + 59248254 ttcttctaac i macFas5.chr19 C 0 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e chlSab2.chr6 47346918 374 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I a score=108541.000000 s hg38.chr19_GL949753v2_alt 412984 90 + 796479 tgtttgttaggcgtttccaatgatgacatttggtgtatccctatggccacatcatgttatgcactatcaacactactggaaatggagtca s panTro4.chr19 59607564 90 + 63644993 tgtttgttaggcgtttccaatgatgacatttggtgtatccctatggccacatcatgttatgcactatcaacactactggaaatggagtca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56524218 90 + 60714840 tgtttgttaggcttttccaatgatgacattcggtgtatccctatggccacatcatgttatggactatcaatactactggaaattgagttg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60489803 90 + 64156825 tgtttgttaggagtttcccatgatgacatttggtgtatccctacagccacatcatgttatggactgccaatgctactagaaatggagtta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55589063 90 + 59248254 tgttcgttaggagtttcccatgatgacatttggtgtatccctacagccacatcatgttatggactgccaatgctactagaaatggagtta i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47347292 90 + 50890351 tgtttgtcaggagtttcccatgatgacatttggtgtatccctacagccacatcatgttatggactgtcaatgctactagaaatggagttg i chlSab2.chr6 I 374 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 103217158 126 - 106955855 I e papAnu2.chr19 3770788 711 - 51301725 I a score=748786.000000 s hg38.chr19_GL949753v2_alt 413074 561 + 796479 ttagtgtttttaaatctaatcaaattagaaagccgatttcagaaactttggatccaa-ttcaga-aaactcatccttaaaaattctgttcctttggaatcatccctggaaccaaaatGATTTTTTTTTCAagggttctccagagaaattgaaccagcagaatgtTTATTTATGTGtctatctgtgtatctatgtatctatctatgtatctatccatgtatctatgtatctatctatttatctatctatctatTTATTTGTTTATCTATTCatttacctaggaattggctcatgtgattgtaggagcttggtgagtccaaaatctgcaggacagtagagtatcctggagactcaggaaagagttgtagcaaactaaaaaatccaa------agacaatctgctggaagaatttcttcttgctcaggggagctcTCTGCTATTACTTTATTGTTATTTTGCTCACAAGACATGTATCATCCTATAACATATTGGATTTTCTATTAATTTTTG---------TTGTTGTCTAATATCCATCTTTCTCAACTATAATATTGATTCAATACAGACA--CTTTTTT s panTro4.chr19 59607654 552 + 63644993 ttagtgtttttaaatctaatcaaattagaaagccgatttcagaaactttggatccaa-ttcaga-aaactcatccttaaaaattctgttcctttggaatcatccctggaaccaaaatGATTTTTTTT-CAagggttctccagagaaattgaaccagcagaatgtTtatttatgtgtctatctgtgtatctatgtatctatctatgtatctatc--------tatgtatctatctatttatctatctatctaattatttgtttatctatTCatttacctaggaattggctcatgtgattgtaggagcttggtgagtccaaaatctgcaggacagtagagtatcctggagactcaggaaagagttgtagcaaactaaaaaatccaa------agacaatctgttggaagaatttcttcttgctcaggggagctcGCCACTATTATTTTATTATTATTTTGCTCACAAGGCATGTATCATCCTATAACATATTGGATTTTCTATTAATTTTTG---------TTGTTGTCTAATATCCATCTTTCTCAACTATAATATTGATTCAATACAGACA--CTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56524308 535 + 60714840 ttagtgtttttaaatctaatcaaattagaaaaccgatttcagaaactttggatccaa-ttcaga-aagcccatccttaaaaactctgttcctttggaatcatccctaggaccaaaatGATTTTTTT--CAagggttctccagagaaattgaaccagcagaatgtTtatttatgtgtctatctgtatatctatgtatctatctatgtatctgtc------------------------tatttatctatctatctatttgtttatctatTCatttatctagtaattggctcatgtgattgtaggagcttggtgagtccaaaatctgcaggacagtagagtatcctggagactcaggaaagagttgtaggaaactaaaagatccaa------agacaatctgctggaagaatttattcttgctcaggggagctcTCCACTATTATTTTATTATTATTTTGCTCACAAGGCATGTATCATCCTATAACATATTGGATATTCTATTAATTTTTG---------TTGTTGTCTAATATCCATCTTTCTCAACTATAATATTGATTCAATACAGACA--CTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3857536 450 + 106955855 ttaatgtctttaaatctaatc-----agagagccagttccataaacctcagaggcag-t--agacaaacgtatt----aagattcagttcatctagaatcattcctatgaccaaaTTAtgtatttg--taagtgttctccagagaaacagaacca-----------------------atatgtgtacatatgtacatatctatatctacatc------------------------tacttatcttgctat------------------------ctaggaatgggttcatgtaattgttggcacttggtgagtccaaaatctgcag-----------agcctgaagacttggggaagagtttcagc-----------tccagtctgccagacaatctgctagcaaaattttttactattctgtggagcac------attacttc----ttttcCttctcacaatgcacttattatcttttaacataatgcatattctattatttattg-------------tgtgtaatgtccacttttcttgactacagtattgacttaatacaggcaggctctttt i nomLeu3.chr10 T 77241 C 0 s rheMac3.chr19 60489893 553 + 64156825 ttaatgtttttaaatcaaatcgagttagaaagccaatttcagaaactttggatccaatttcaga-aaactcatcctgaaaaatgctgttcctttggaatcatctctgggaccaaaatGATGTTTTT--CAAGCGTTCTCCAGAGAAATTGAAGCAACAGAATGTTtatttatgtgtctgtctgtacatctacgtatctatctatgtatctatc----------------tacctatgtttctatctatctatctatttagttatctatTCatttatctaggaattggctcatgtgattgtaggagcttgctgagttcacaatctgcaggacaggagagtatcctggagacttaggaaagagttgtaggaaactaaaaaatccga------agacaatctgctggaagaatttcttcttgcttgggggagctcTCTGCTATTATTTTATTATTATTTTGCTCACAAGGCATGTATCATCCTATAACATATTGGATATTCTATTAATTTTTATAATTTTTGTTACTGTCGAATATCCATCTTTCTCGACTCTAATATTGATCCAATACAGGCA--Atttttt i rheMac3.chr19 C 0 I 5736 s macFas5.chr19 55589153 553 + 59248254 ttaatgtttttaaatcaaatcgagttagaaagccaatttcagaaactttggatccaatttcaga-aaactcatcctgaaaaatgctgttcctttggaatcatctctgggaccaaaatGATGTTTTT--CAagcgttctccagagaaattgaagcaacagaatgtttatttatgtgtctgtctgtacatctacgtatctatctatgtatctatc----------------tacctatgtttctatctatctatctatttagttatctattcatttatctaggaattggctcatgtgattgtaggagcttgctgagttcacaatctgcaggacaggagagtatcctggagacttaggaaagagttgtaggaaactaaaaaatccga------agacaatctgctggaagaatttcttcttgctcgggggagctcTCTGCTATTATTTTATTATTATTTTGCTCACAAGGCATGTATCATCCTATAACATATTGGATATTCTATTAATTTTTGTAATTTTTGTTATTGTCGAATATCCATCTTTCTCGACTCTAATATTGATCCAATACAGGCA--Atttttt i macFas5.chr19 C 0 I 1730 s chlSab2.chr6 47347382 550 + 50890351 ttagtgtttttaaatcaaatcgagttagaaagccgatttcagaaactttggatccaa-ttcaga-aaactcatccttaaaaatgctgttcctttggaatcatctctgggaccaaaatGATGTTTTT--CAAGCATTCTCCAGAGAAATCGAAGCAGCAGAATGTTtatttatgtgtctgtctgtatatctacatatctatctatgtatctgtt----------------t--ctatctatctatctacctatctatttgtttatctatTCatttatctaggaattggctcatgtgattgtaggagcttgctgagttcacaatctgcaagacaggagagtatcctggagacttaggaaagagttgtaggaaactaaaaaatccga------agacaatctgctggaagaatttcttcttgctcgggggagctcTCTGCTATTATTTTATTATTATTTTGCTCACAAGGCATGTATCATCCTATAACATATCGGATATTCTATTAATTTTTGTAATTTTTGTTATTGTCTAATATCCATCTTTCTCAACTATAATATTGATCCAATACAGGCA--Atttttt i chlSab2.chr6 C 0 I 5036 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e papAnu2.chr19 3770788 711 - 51301725 I a score=140901.000000 s hg38.chr19_GL949753v2_alt 413635 376 + 796479 AGAAGTCTTTCTGTCTTTT-TTCTGATACATCTTATACACCAAGAATCACGTTTGACCC--ATTAGATACTTAATGTGTGCCCATGAAAACAGTGAATAAAAGTGTCTCCACTTCTTCCAAGTTTATTTTTAACACTGGAGCAAATGATTTCTACTTGATTCTCTCTTTTTTTCTCCCTTCCAGGCTGCCTTTAGTGCAAAGTCCTCAGAATGGAAA------AATATTCTTGGGGGAGGCAAAACCTTAAGGTTGGCAAGAAACAAACCCCAGCCTTATCCTTACTTTCCTTCTCTCAG---TTAGATCTCAATGTCCTTGGCTGCAATGCCGTCTCTACCTAGTCTACTTCAAGCTTCCCAGATATGATTTCCTCTCTAAGTTtct s panTro4.chr19 59608206 374 + 63644993 AGAAGTCTTTCTGTCTTTT-TTCTGATACATCTTATACACCAAGAATCACATTTGACAC--ATTAGATACTTAATGTGTGCCCATGAAAACAGTGAATAAAATT-TCTCCACTTCTTCCAAGTTTATTTTTAACACTGGAGCAAATGATTTCTACTTGATTCTCTCTTTTTTTCTCCCTTCCAGGCTGCCTTTAGTGCAAAGTCCTCAGAATGGAAA------AATATTCT-GGGGGAGGCAAAACCTTAAGGTTGGCAAGAAACAAACCCCAGCCTTATCCTTACTTTCCTTCTCTCAG---TTAGATCTCAATGTCCTTGGCTGCAATGCCGTCTCTACCTAGTCTACTTCAAGCTTCCCAGATATGATTTCctctctaagtttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56524843 376 + 60714840 AGAAGTCTTTCTGTCTTTT-TTCTGACACATCTTATACACCAAGAATCACGTTTGACAC--ATTAGATACTTAATGTGTGCCCATGAAAACAGTGAATAAAAGTTTCTCCACTTCTTTCAAGTTTATTTCTAACACTGGAGCAAATGATTTCTACTTGATTCTCTCTTTTTTTCTCCCTTCCAGGCTGCCTTTAGTGCAAAGTCCTCAGAATGAAAA------AATATTTTGGGGGGAGGCAAAACCTTAAGGTTGGCAAGAAACAAACCCCAGCTTTATCCTTACTTTCTTTCTCTCAC---TTAGATCTCAGCGTCCTTGGCTGCAACGCTCTCTCTACCCAGTTTACTTCAAGCTTCCCAGATATGttttcctctctaagtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3857986 369 + 106955855 c-aagttttcctgtcctttattctgagacatctcatacac-------catgtttgacacagattagatactTCACATGTGCCTATGGAAACAGGGAATAAGAGTTTCTCCACTCCCGCCAAGTTCATTTCTCTCACGGAGACAATTTTTTCCAACTTGAT----TCTTTTCTTCTCCCTTCCAGGCAGCCTTTTGAACAAAGTTCTCAGAATAGAAAAAGAATAACATTCA----GGAGGCAAGACCCCAAGGTTGGAAAGAAACACA-TCCAGACTCATTGCCTCCTCCTTTCTCTCAGTTCTTAGACATCAGGGTCCTCAtctgatatcttatttccgtgtggttt-ctccaagaatttcagagatg-tttcctctttctctttct i nomLeu3.chr10 C 0 I 222 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=11130.000000 s hg38.chr19_GL949753v2_alt 414011 31 + 796479 ctgtctcttcctgtctctgtctctctattgt s panTro4.chr19 59608580 31 + 63644993 ctgtctcttcctgtctctatctctctatcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56525219 31 + 60714840 ccgtctcttcctgtctctgtctctctatcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3858577 30 + 106955855 ctgtctttatct-tttttgtctctctttctc i nomLeu3.chr10 I 222 C 0 e canFam3.chr1 19849227 2922 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=210093.000000 s hg38.chr19_GL949753v2_alt 414042 434 + 796479 tctgttt--ctttccatctc----tctctttctTGCTCCAACTTTCTCAGTCGACTAAAACTAATAGCTACGAATAGCTTTCAGTAATTTGAACATTTCACGGATGTTTTTCT-AGATCAACTGAAATCCCTATGCAAACACTGTCACTGTACTTGCAGATGAAATGATAATCACTTCCCGGCAAGAAAAGGATCTCATGGTAGTCTTAAGCCTTTATCTCAGGGTTAAGATGCCCCCTTTTGTGGAGGTGCTTAGACTGTGACTATGGCAGTTGCTTTCCCAGCAAGAAACTGCATTTGGTAAGTGGACCTTC-TTTCAGTTAGAGAGCCATATTCTTAGAGATGTAGAATAT-TTGTTGCAACATATATGTGTGtatatatatatatatatatatatatatatatatGGTGTAAACATCCCGGTCTATTTCCCCTAAGGTC- s panTro4.chr19 59608611 405 + 63644993 tctgttt--ctttccatctc----tctctttcttgctccaactttctcAGTCGACTAAAACTAATAGCTACGAATAGCTTTCAGTAATTTGAACATTTCAGAGATGTTTTCCT-AGATCAACTGAAATCCCTATGCAAACACTGTCACTGTACTTGCAGATGAAATGATAATCACTTCCCGGCAAGAAAAGGATCTCATGGTAGTCTTAAGCCTTTATCTCAGGGTTAAGATGCCCCCTTTTGTGGAGGTGCTTAGACTGTGACTACGGCAGTTGCTTTCGGAGCAAGAAACTGCATTTGGTAAGCGGAACTTC-TTTCAGTTAGAGAGCCATATTCTTAGAGATGTAGAATAT-TTGTTGCAA----------------------------TATATATATATAT-TATGGTGTAGACATCCCCGTCTATTTCCCCTAAGGTC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56525250 407 + 60714840 tctgttt--ctttctgtctc----tctttttcttgctccaactttctcAGTTGACTAAAACTGATAGCTATGAATAGCTTCCAGTAATTTGAACATTTCACAGATGTTTTTCT-AGATCAACTGAAATCCCTATGCAAACACTGTCACTGTACTTACAGATGAAATGATAATCACTTCCCGGCAAGAAAAGGATCCCATGGTAGTCTTAGGCCTTTATCTCAGGGTTAAGATGCCCCCTTTAGTGGAGGTGCTTAGACTGTGACTACAGCAGTTGCTTTCCCAGCAAGAAACTGCATTTGGTATGTGGACCTTCTTTTCAGTTAGAGAGCCATGTTCTTAGAGATATAGAATAT-TTGTTGCAA----------------------------AAAATATATATATATATGGTGTAGACATACCAGTCTATTTCCCCTGAGGTC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3858607 401 + 106955855 tctgtct--ctctctatctctgtttctgtctcttgctctctttctctcAGTTGATTGCATCTAATCACTACTATTAGCTCTCAGTCATTTGAACATTTCAAAAATGTTTTTCCGAGAGCATCTCAAATCCCCATGCAAACACTGTCACTGTACTTGCAGATGATATAATAATTACCTGTCAGCAATGAGACGACCTCATGGT-GTCCCAAACCTTTGTATCAGGGACAAGACGTCCCCTTTTGCACAGGTGCTCAGACTGTGACCATGACGGCTACTTCTTCAGCAAGAAATGGCATTTGGTAAGAGGAATTT--TTTTAGATACAGAGCCATATTCTCAGAGAATTAGAGTGT-TTATCATAAAAAACTTGA-------------------TGTGTACACAAAAGTATTGTTTAG-----------------TCCTAGCGTC- i nomLeu3.chr10 C 0 I 1572 s canFam3.chr1 19852149 399 - 122678785 tctgtttgACCATCCCTCTC----TCTTTTCC---CTTTCTCTCTCTCAATCCATCACTATCAATAGCCACTAACAGCTTTCAGTAATTTGAACATTTCGCAAATATTTTTCTGAGATCATGTCGAACTCCCATGGAGACACTATAACTGTATTTACAGATGAAGTGATAATCACTTCCTAGCAAGGAG--------GTGGCTGTACCAAACCTTTGTCTCAGGGATGAGATGCTCTCATT-GCGCACCTTTACAGACTGTGATCATAGGAGCTATTGTCCTGGCAAGAAATCACATTTGGTAAGTGCATTTTC-TTTTAGATAGAAAGACATATTCTTAGAGAAATAGAATGTGTCTTTGGAA----------------------------ACTTTACAAAAAAACATGATGTGGATGTACAGTTTCTTCTCTCCCTACATTT i canFam3.chr1 I 2922 C 0 e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=7848.000000 s hg38.chr19_GL949753v2_alt 414476 18 + 796479 AAAACTGAACATGGAAAA s panTro4.chr19 59609016 18 + 63644993 AAAACTGAACATGGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56525657 18 + 60714840 AAAACTGAGCATGGAAAA i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19852548 18 - 122678785 GAAACTAAACACAGAGAA i canFam3.chr1 C 0 I 51999 e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3859008 1572 + 106955855 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=59367.000000 s hg38.chr19_GL949753v2_alt 414494 231 + 796479 GAAACATGGGGCAGGGGTATTTTCTGAGAGTTCCTGAGACACAGAACCACCCCAGCCTTCCCACTCAGGGCTGCCTGGCATCTCCTGTTTACCTTCTCTGTCATAGCCCCATCTGAAAGACTCTGTCTGAATAAATATACCAAACCTCATAGTCTTAGCTCTCCTCTTTGTACGAGGGGTAAGAGTGTGTTCAGGTCTTGGCTCCTGTTCACACACCTGTTGTCTAATGGC s panTro4.chr19 59609034 230 + 63644993 GAAACATGGGGCAGGGGTATTTTCGGAGAGTTCCTGAGACA-AGAACCACCCCAGCCTTCCCACTCAGGGCTGCCTGGCATCTCCTGTTTACCTTCTCTATCATAGCCCCACCTGAAAGACTCTGTCTGAATAAATATACCAAACCTCATAGTCTTAGCTCTCCTCTTTGTAGGAGGGGTAAGAGTGTGTTCAGGTCTTGGCTCCTGTTCAGACACCTGTTGTCTAATGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56525675 227 + 60714840 GAAACATGGGGCAGGGGTATTTTCTGAGAGTTCCTGAGACACAAAACCACCCCAGCCTTCCCGCTCAGGGTTGCCTGGCATCTCCTGTTTACCTTCTCTATCATAGCCCCACCTGAAAGAC----TCTGAAGAAATATGCCAAACCTCATAGTCTTAGCTCTCCTCCTTGTAGGAGGGGTAAGAGTGTGTTCAGGTCTTGGCTCCTGTTCACACACCTGTAGTCTAATGGC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3859008 1572 + 106955855 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=536786.000000 s hg38.chr19_GL949753v2_alt 414725 1052 + 796479 AACTGGTACTTAGGACATTTGAAATATCTCTGGTGGCTGCATGCTGCACTTTGGTTGGCAATGGCTGTACGTCTCTGAAAACCTTCTGTGATGATTGCAAAACGGTACACTTTCATCTCCTTTCTTATGGGTTCCGGGGAGCCGAATGCACTTGATTTCACCAGTAATATATGTCTATAGACAATTTCTCAGATCGGCGTGAAGAAGGTAAATTATATCTTTCATTTAGAAAAATATAAATCTCACTTTTACAAAACGTGACTAAGAATTGTCAAGGCTTAGAGAGCAGGAATAATCAGGGACTATATGGGTGTTCATGTCTAATAAATGCAACTCTGATCCTTAACCGTATTTAAAAGCGCTTTCAGAGTTCCGAAACCTTTTCATCTGCTCCAGATTCACTGGGTTCTGAAGCCAAAGCTTTCTGAAACTGTTCCTCCTCTCAGCCCCTAAGTGGTGAACGCTTGGTCTGTTCTGACAGCTGAGATCCTAGCCACGGGAGC-GTGAGGTGAGGAATTTCCTGTCACCATCCCAGAAAGTAAAATATAGCCTCATTATTTCCTAATTGTGTTTCCATAAGAAAAACAAAGAATTCGATAAAAGAAACAAAGACCAGTATTTACTTTTTCATAAATGATTGTAGTTACTGAAGGACATATGGGGCCCGTAATCACAACGGGTCTAGGACTCACAGGTATTTTCTCGTCTCCATTATTTACCATAATTGTGTCATTCTCACTCCTGCTTACATGATTTATTTGGTATAATTTAAATGTATTTGTATGTTTTCTCTATGACTTAATGGGCAACATGCCCCTTTCTCTAACTTGTGTTTGTTGGTTTGTTGATCTCTGATACAAATTTGCTAAATATATTCTAGTTGTTGTTATAAAATATTTTCTTTCCAAGAAAATTTTTCAACAGGTTCATGTGCACACCATATATGAAATTCATATTCTTTTCTTATTCTCTTATTTTTCTCCCCATCCTCTACAACACTTGGGCCAAACTGTTATGGATTATTGTGTATCCA-CCAAGAAATGGCTTTGAGT s panTro4.chr19 59609264 1053 + 63644993 AACTGGTACTTAGGACATTTGAAATATCTCTGGTGGCTGCATGCTGCACTTTGGTTGGCAATGGCTGTACATCTCTGTAAACTTTCTGTGATGATTGCAAAGCGGTACACTTTCATCTCCTTTCTTATGGGTTCCAGGGAGCCGGTTGCACTTGATTTCACCAGTAATATATGTCCATAGACAATTTCTCAGATCAGCGTGAAGAAGGTAAATTATATCTTTCATTTAGAAAAATATAAATCTCACTTTTACAAAATGTGACTAAGAATTGTCAAGGCTTAGAGAGCAGGAATAATCAGGGACTATATGGGTGTTCATGTCTGATAAATGCAACTCTGATCCTCAACCATATTTAAAAGCGCTTTCAGAGTTCCCAAACCTTTTCATCTGCTCCAGATTCACTGGGTTCTGAAGCCAAAGCTTTCCGAAACTGTTCTTCCTCTCAGCCCCTAAGCAGTGAGCTCTTGGTCTGTTCTGACAGCTGAGATCCTAGCCACGGGAGCTGGGAGGTGAGGAATTTCCTGTCACTATCCCAGAAAGTAAAATATAGCCTCGTTATTTCCTAATTGTGTTTCCATAAGAAAAACAAAGAATTCGATAAAAGAAACAAAGACTAGTATTTACTTTTTCATAAATGATTGTAGTTACTGAAGGACATATGGGGCCCATAATCACAACGGGTCTAGGACTCACAGGTATTTTCTTGTCTCCATTATTTACCATAATTGTGTCATTCTCACTCCTGCTTAAATGATTTATTTGGTATAATTTAAATGTATTGGTATGTTTTCTCTATGACTTAATGGGCAACATGCCTCTTTCTCTAACTTGTGTTTGTTGGTTTGTTGATCTCTGATACAATTTTGCTAAATATATTCTGGTTGTTGTTATAAAATATTTTCTTTCCAAGAAAATTTTCCAACAGGTTCATGTGCACATCATATGTGAAATTCATATTCTTTTCTTATTCTCTTGTTTTTCTCCCCATCCTCTACAACACTTGGGCCAAACTGTTATGGATTATTGTGTATCCA-CCAAGAAATGGCTTTGAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56525902 1053 + 60714840 AACTGCTGCTTGGGACATTTGAAATATCTCTGGTGATTGCATGCTGCTCTTTGGTTGGCAATGGCTGTACATCTCTGAAAACTTTCTGTGATGATTGCAAAACGGTACACTTTCATCTCCTTTCTTATGGGTTCCGGGGAGCTGGATGCACTTGATTTCACCAGTAACATATGTCTATAGACAATTTCTCAGATCAGCATGAAGAAGGTAAATTATATCTTTCATTTAGAAAAATATAAATCTCACTTTTACAAAACGTGACTAAGAATTGTCAAGGCTTAGAGAGCAGGAATAATCAGGGACTATATAGGTGTTCATGTCTTATAAATGCAACTCTGATCCTTAACCATATTTAAAAGTGCTTTCATCGTTCCCACACCTTTTCATCTGCTCCAGATCCACTGGGTTCTGAAGTCAAAGCTTTCTGAAACTGTCCTTCCTCTCAGCCCTTAAGCGGTGAATGCTTGGTCTGTTCTGACAGCTGAGATCCCAGCCACATGAGCTGTGCGGTGAGGAATTTCCTGTCACCATCTCAGAAAGTAAAATATAGCCTCATTATTTCCTAATTGTGTTTCCATAAGAAAAACAAAGAATCTGATAAAAGAAACAAAGACTAGTATTTACTTTTTCACAAATGATTGTAGTTACTGAAGGACATATAGGACCCATGATCACGACAGGTCTAGGACTCACAGATATTTTCTTGTCTCCATTATTTACCATAATTGTGTCATCCTCACTCCTGCTTAAATGATTTATTTGGTATAATTTAAATTTATTTGTATGTTTTCTCTATGACTTAATGGGCAACATGCCTCTTTCTCTAACTTGTATCTGTTGGTTCGTTGATCTCTGATACAAATTTGCTAAATATATTCTAGTTGTTGTTATAAAATATTTTCTTTCCAAGAAAATTTTTCAACAGGTTCGTGCACACATCCTCTATGAAATTCATATTCTTTTCTTAGTCTCTTATTTTTCTCCCCATCCTCTACAACTCTTGGGCCAAACTGTTATGGATTATTGTGTATCCA-CCAAGAAATGGCTTTGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103217284 1053 - 106955855 AACTGCTACTTAGGATATTCGAAATATCTCTGGTAGTTGCATGCTGTGCTTTGGTTGGCAATGGCTGTACATCTCTGAAAACTTTCTGTGATGATTGCAAAACGGTACACTTTCATCTCCTTTCTTATGGGTTCCAGGGAGCCGGATGCACTAGATTTCAGCAGTAATATATGTCTATAGACAATTTCTCGGATCAGTGTGAAGAAGGTAAATTATGTCTTTCA-TTAGGAAAATGTAAATCTCCCTTTTACAAGATGTGACTAAGAGTTGTCAAGGCTTAGAGAGCAGGAATAATCAGGGATTGTATGGATGTTCATGTCTAATAAATGCAACTCTGATCCTTAACCATATTTAAAAGCGCTTTCATAGTTCCCAAACCTTTTCATCTGCTCCACATCCACTGGGTTCTGAAGCCAAAGCTTTCTGAAACCGTTCTTCCTCTCAGCCCTTAAGCAGTGAATGCTTGGTCTGTTCTGACAGCTGAGATCCCAGCCACAGGAGCTGTGAGGTGAGGAATTTCCTGTCACCATCCCAGAAAGTAAAATACAGCCTCATTATTTCGTAATTGTGTTTCCACAAGAAAAACGAAGAATTTCATAAAAGAAACAAAGGCTAGTATTTACTTTTTCATAAATGATTGTAGTTACTGAAGGACATATGGGGCCCATAATCGTGACGGGTCTAGGATTCACAGATACTTTCTTGTCTCCATTATTTACCATAATTGTGTCATTCTCCCTCCTGCTTAAATGATTTATTTGGTATAATTTAAATTTATTTGTATGTTTTCTCTATGACTTAATGGGCAACATACCTCTTTCTCTAACTTGTATTTGTTGGTTGGTTGATTTCTGATACAAATTTGCTAAGTATATTCTAGTTGTTGTTATAAAATATTTTCTTTCCAAGAAAATTTTTCAACAGGTTCATGTGCACATCCTATATGAAATTCATATTCTTTTCTTATTCTCTTATTTTTCTCCCCATCCTCTACAACACTTGGGCCAGACTGTTATCGATTATTGTGTATCCATCCAAGAAATGGCTTTGAgt i nomLeu3.chr10 I 126 T 37183 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=138769.000000 s hg38.chr19_GL949753v2_alt 415777 382 + 796479 TTTTAAAGTATCTATTTCTCTGAACTAATCTGTAATTT-CCAAGAATCTAATATTTCTCAATTTTTAACACCAATTATTTTACTTTGTAATTTAACAACTTGTTAATTATTAAACAAGT--AAAAAATGCAAAAATAAAAAC----TATGTTTTGATAGTTTCTAATTTATATTCTTTGGAAAATGTCTAAA-TTTTAGGAAATT---AAAATTTTTTTCGAATTGAATGTGGCTAGAAATAATAATTTTTCACTGCATGGCATTACGTAAGTGTAATAGAATTCTACTCTCATCCTACTTTAGATAATGCCAAACTGAGAAACCATTATTAATTTATTTTGTTTTTGTCTAGACATGAAAATGAAAAGTTGCCATCAGAAGAATCATTATGG s panTro4.chr19 59610317 382 + 63644993 TTTTAAAGTATCTATTTCTCTGAACTAATCTGTAATTT-CCAAGAATCTAATATTTCTCAATTTTTAACACCAATTATTTTACTTTGTAATTTAACAACTTGTTAATTATTAAACAAGT--AAAAAATGCAAAAATAAAGGC----TATGTTTTTATAGTTTCTAATTTATATTCTTTGGAAAATGTCTAAA-TTTTAGGAAATT---AAATTTTTTTTCAAATTGAACGTGGCTAGAAATAATAATTTTTCACTGCATGACATTACGTAAGTGTAATAGAATTCTACTCTCATCCTTCTTTAGATAATGCCAAACTGAGAAACCattattaatttattttatttttGTCTAGTCATGAAAATGAAAAGTTGCCATCAGAAGAATCATTATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56526955 386 + 60714840 TTTTAAAGTATCTATTTCTCTGAACTAATCTGTAGTTT-CCAAGTATCTAATATTTCCCAATTTTTATCACCAATTATTTTACTTTGTAATTTAACAACTTGTTAATTATTAAACAAGT--AAAAAATGCAAAAATAAAGACTATTTATGTTTTGATAGTTTCTAATTTATATTCTTTGGAAAATGTCTAAA-TTTTAGGAAATT---AAAATTTTTTTCAAATTGAATGTGGCTAGAAATAATAATTTTTCACTGCATGGCATTACGTAAATGTAATAGAATTCTATTCACATCCTACTTTAGATAATGCCAAACTGAGAAACCGTTATTAATTTATTTTGTTTTTGTCTAGACATGAAAATGAAAAGTTGCCGTCAGAAGAATCATTATGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3860580 375 + 106955855 TTCTAAAGCATCTATTTCTCTAAACTAATCTACACTTTACCAAGATTCTAGTATTTTCCAAATTTTAATGATGGTTAAATCCCGTTGTAGCTTAACAACTTTTTAATTATTAAACCAGTTAAAATATTATAAAAATACTGTT----CTTGTTTTGGTAAATCCTAAT-----GTTTTTGCAATGCATCTAAATTTTTAGGTAATTATAAAATAGTATGTCAAGTTAAATATGGCTAAAATACTCTATCTTCTACTTCATAGTATCATATAAAGG--------TTTCACTCTCATCTCACATTCATTCATTTCAAACTGAGGAACCATTACT-CTTCATTTAATTTTCACCCAGACATAAAAATCCAAAGTTGCAAGAAGAATAGTAATTATGg i nomLeu3.chr10 I 1572 T 86282 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=111351.000000 s hg38.chr19_GL949753v2_alt 416159 426 + 796479 AAAGTGAAAATATGGTGCTAAATTAAATATGTGGCAAATAAATGTGtttttttaacttttaggttcagaggtacatgtgcaggtttgttatataagtaaattgtgtgttacaagggtttgaagtacacattattttgttatccaggtggtaagcatagtaccaaataggtagtttttctgtcctcaccctccccacttcctcaaccctcaaggaggtccccctgtgtgtgattaccaaggaggccccactgtgtgttattacctcctatgtgtccattatgtattcagtatttacttccaacttataagtgacaacatatagtattcagctttctttttctgtgtcagttctcttagaataatgaccaccaggtccattaatgtggctgaaaatgacagtatctTAttctttgttttgaggcagaa s panTro4.chr19 59610699 426 + 63644993 AAAGTGAAAGTATGATGCCAAATTAAATATTTGTCAAATAAATGTGtttttttaacttttaggttcagaggtatatgtgcaggtttgttatataagtaaattgtgtgtcacaagggtttgaagtacacattattttgttatccaggtgataagcatagtacgaaataggtagtttttctgtcctcagcctccccacttcctcaaccctcaaggaggcccccctgtgtgtgattaccaaggaggccccactgagtgttattacctcctatgtgtccattatgtactcagtatttacttccaacttataagtgacaacatatagtattcagctttctttttctgtgtcagttctcttagaataatgaccaccaggtccattaatgtggctgaaaatgacagtgtcttattttttgttttgagacagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56527341 426 + 60714840 AAAGTGAAAGTATGATGCTGAATTAAATATTTGGCAAATAAATGTGtttttttaacttttaggttcagaggtacatgtgcaggtttgtgatataagtaaattgtgtgtcacaggggtttaaagtacacattattttgttatccaggtgataagcacagcgccaaataggtagtttttctatcctcaccctccccacttcctcaaccctcaaggaggcccccctgtgtgtgattaccaaggaggccccactgtgtgttattacctcctatgtgtccattatgtactcagtatttacttccaacttaaaagtgagaacatatagtatccagttttctttttctgtgtcagttctcttagaataataaccaccaggtccattaatgtggctgaaaatgacagtatcttattctttgttttgagacagta i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=48587.000000 s hg38.chr19_GL949753v2_alt 416585 570 + 796479 tct--gtctgtcacccaggctggagtgcagtggcactatctcagctcactgcagcccccgcctcccaggatcaagcaattcttgtgcctcagcctgccgagtaaatgggattacaggtatgcaccaccacacccagctagtcttgttttgttttgtcttgttttttgagatggagtctcgctgtgtcgccaggctggagtggagtggcgtgatctcggctcactgcatcctctgcctcccggattcaagcgattctcctgcctcagcctcctgagtagctgggactaccaggtgcacaccaccatgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtcccaatctcttgaccttgtgatccacccacttcagcctcccaaagtgctgggattacaggcatgagccactgcatctggccagtttttgtattttttttttttagtagagatgaagttttgccatgttggccaggctggtctcaaactcctgtcctcaagttatccacccgcctcggcctttcaaagtgctgggattacaggtgtga s ponAbe2.chr19 56527767 567 + 60714840 tctcactctgtcacccaggctggagtgcagtggcactatctcggctcactgtagaccccacctcccaggctcaagcaattcttgtgcctcagcctgccgagtaaatgggattacaggtgtgcaccaccacgcccagctagttttgttttgttttgtcttgttttttgagatggagtctcgctctatcgccaggctggagtgcagtggcgcgatctcggctcactgcatcctctgcctcccgggttcaagcaatt---ctgcctcagcctcctgagtagctgggactaccaggtgcgcaccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatggtcctagtctcttgacctcgtgatccgcccacttcagcctcccaaagtgctgggattacaggcatgagccactgcacctggccagtttttgta--ttttttttttagtagagatgaggttttgccatgttggtcaggctggtctcaaactcccggcctcaagttatccacccgcctcggcctttcaaaatgctgggattacaggtgtga i ponAbe2.chr19 C 0 I 9182 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I e panTro4.chr19 59611125 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 417155 23 + 796479 TATATATGATATATATGTGTCCT e canFam3.chr1 19852566 51999 - 122678785 I e ponAbe2.chr19 56528334 9182 + 60714840 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I e panTro4.chr19 59611125 0 + 63644993 C a score=3816.000000 s hg38.chr19_GL949753v2_alt 417178 53 + 796479 catggacacagagaggg-aacttcacacaccagggcctgtcagggggttgggta s ponAbe2.chr19 56537516 52 + 60714840 catggacacagagaggggaacttcacacaccagggcctgtcagggggttggt-- i ponAbe2.chr19 I 9182 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I e panTro4.chr19 59611125 0 + 63644993 C a score=33993.000000 s hg38.chr19_GL949753v2_alt 417231 161 + 796479 ggggggtaggggagggataacattaggagaaatacctaatgtagacgacgggttgatgggtgcagcaaattgccatggcacttgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagaacttacagtataataataaTAATAATAATAAA s panTro4.chr19 4031973 154 - 63644993 gggggctaggggagggatagcattaggagaaatacctaatgtaaatgacgagtcgatgggtgcagcaagccaacatggcacatgtatacctatgtaacaagcctgcacgttctgcacgtgtaccccagaacgtaaagtatcataataataa-------aaa i panTro4.chr19 n 0 C 0 s ponAbe2.chr19 56537568 156 + 60714840 ggggggtaggggagggatagcattaggagaaatacctaatgtagatgacggatggatgggtgcagcaaactgccatggcacgtgtatacctatgt-acaaacctgtgcgttttgcacatgtatcccagaacttacagtataataataaTAATAA----TAA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 45789733 125 + 49145316 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=2445.000000 s hg38.chr19_GL949753v2_alt 417392 5 + 796479 AAGAG s panTro4.chr19 4032127 5 - 63644993 aaGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56537724 5 + 60714840 AAGAG i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 3359004 5 - 49145316 AAGAA i calJac3.chr22 n 125 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 3770788 711 - 51301725 I e macFas5.chr19 55589706 1730 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=82906.000000 s hg38.chr19_GL949753v2_alt 417397 96 + 796479 TGGTCTCTGGGCTATAAGTTCCCTGCAGAGGATTGCATCATCTATTTTGTCACTG-CCCCCACCCTAATGTTTGTAGGCTCATATATTATGCCAGTT s panTro4.chr19 4032132 97 - 63644993 TGGTCTCTGGGCTATAAGTTCCCTGCAGAGGGTTGCATCATTTATTTTTTCACTGTCCCCCACCCTAATGTCTGTAGGCTCATATATTATGCCAGTT i panTro4.chr19 C 0 n 0 s ponAbe2.chr19 56537729 96 + 60714840 TGGTCTCTGGGCTATAAGTT-CCTGCAGAGGATTGCAGCATCTATTTTGTCACTGCCCCCCGCCCTAATGTTTGTAGGCTCATATATTTTGCCAGTT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55591436 94 + 59248254 TGGTATCTGGGCTCTAAGTTTCCTCTACAACATTGCATCATTTATTTAATCACTTTCTTTCTC---AATATATGTAGCCTCTTGCATTATGCCAGTC i macFas5.chr19 I 1730 C 0 s papAnu2.chr19 47662527 94 + 51301725 TGGTATCTGGGCTCTAAGTTTCCTCTAGAACATtgcatcatttatttaatcactTTCTCTCTC---AATATATGTAACCTCTTGCATTATGCCAGTC i papAnu2.chr19 I 711 C 0 s calJac3.chr22 3359009 96 - 49145316 TGGTCTCTGGGCTATAAGTTCCCTCCAGAATATTACATCATTTATTTAATCACTT-CCCCCTTTCCAATATTTGGGGATTCATACATTATGCCAGTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=4883.000000 s hg38.chr19_GL949753v2_alt 417493 8 + 796479 AATATGCA s panTro4.chr19 59611125 8 + 63644993 aatatGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56537825 8 + 60714840 AATATGCA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55591530 8 + 59248254 AGCGTGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47662621 8 + 51301725 AGCATGAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 3359105 8 - 49145316 AATATGTA i calJac3.chr22 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e nomLeu3.chr10 3860955 86282 + 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=77976.000000 s hg38.chr19_GL949753v2_alt 417501 58 + 796479 AAGACTTAGGGATTCAGTACTGAATAAA---AATGAGAATGGCCATGGCCTCATATTGCTT s panTro4.chr19 59611133 58 + 63644993 AAGACTTAGGGATTTAGTACTGAATAAA---AATGAGAATGGCCATGGCctcatattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56537833 58 + 60714840 AAGACTTTGGGATTCAGTACTGAATAAA---AATGAGCATGGCCATGGCCTCATATTGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181154 55 - 106955855 AGGACTTTGGGACTCAGTATTGAATAAA---AATG---ATAACCATAGCCTCATATTGCTT i nomLeu3.chr10 T 37183 C 0 s macFas5.chr19 55591538 57 + 59248254 AGGACTTTGGGATTCATTACTGAATAAA---AATAATAATAACAGTGGCTTCATG-TGCtt i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47662629 61 + 51301725 AGGACTTTGGGATTtattacttaataaaaataataataataacagtggcttcatattgctt i papAnu2.chr19 C 0 I 3334 s calJac3.chr22 3359113 58 - 49145316 AGGACTTTGGGACTCAGTATTGAATAAA---AATGATAATAACCATGGCTTCATATTGCCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e chlSab2.chr6 47347932 5036 + 50890351 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=1095.000000 s hg38.chr19_GL949753v2_alt 417559 2 + 796479 AT s panTro4.chr19 59611191 2 + 63644993 at i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56537891 2 + 60714840 AT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181209 2 - 106955855 CT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55591596 2 + 59248254 at i macFas5.chr19 I 1 I 3344 s calJac3.chr22 3359171 2 - 49145316 AC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=65234.000000 s hg38.chr19_GL949753v2_alt 417561 123 + 796479 GAGACTGCCAAA-ACCGAACGTGGTGTACATAATTACCCAGATgtatggtgacttcttaaaaaatgaagcatagccttgccatgtaatcttgccattttacttctgtgtatatatccaggggaa s panTro4.chr19 59611193 123 + 63644993 gagactgccaaa-accgaacgtggtgtacctaattacccagatgtatggtgactccttaaaaaatgaaacatagacttgccatgtaatcttgccattttacttctgtgtatatatccaggggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56537893 123 + 60714840 GAGACTGCCAAA-ACCAAACATGGTGCACAGAATTACCCAGATgtatggtgactccttaaaaaacgaaacatagacttgccatgtaatcttgcaattttacttctgtgtatatatccaggggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181211 105 - 106955855 TAGACTCTCAAACAATGAACACGGTGTA-AAAATTACCCAAATgtatgtcagttcctcagaagattaaacatagaattaccatatgacctggcaattt------------------ctgggaaa i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 3359173 123 - 49145316 TGGAGTGCCTaa-cgtaaacatgatatacatcattatccaactggatggtgattccttcaaaaattaaacgtagaattgccatggagtcttgcaactttacttctgtgcatatatccaagggaa i calJac3.chr22 C 0 n 0 e canFam3.chr1 19852566 51999 - 122678785 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 55591598 3344 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=40708.000000 s hg38.chr19_GL949753v2_alt 417684 108 + 796479 gtcaaagcaaatacttgagcagatatttatacctccatgtgcacagcagcattacttacaacaaacaaaaagaataaaccaccc-aatgttcatagatggatgagtgga s panTro4.chr19 59611316 108 + 63644993 gtcaaagcaaatacttgagcagatatttatacctccatgtgcacagcagcattacttacaacaaacaaaaagaataaaccaccc-aatgttcatagatggatgagtgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56538016 109 + 60714840 atcaaagcaaatacttgagcagatatttatacctccatgtgcacagcagcattacttacaacaaacaaaaagaataaaccacccaaatgttcatagatggatgagtgga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103181316 101 - 106955855 attaaagcaaggatttaaagggatgctcatatactcatgttcataacagcgttattcatattaacaaaaaagtagaaacaacct-aa-------agatggataaatgga i nomLeu3.chr10 C 0 T 47045 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 55591598 3344 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=299311.000000 s hg38.chr19_GL949753v2_alt 417792 1174 + 796479 gacataaactgtagtgtagacatacagtagagtatgtatgtcttacaaggaatgaaatcatgattgccacattctacaacacgggtgaaacttgaagatgttatgcagactgaaatcaggcaatcacaaaaagacaagtattgtatgattctatttatatgaagtgcatagaataggcaaacccatagagacagaaagtagaatattggcttccaggggctggggttgggggagagaaaatgggaattggtatttaatgcatacagattttcagtttaggatcatgaaaaagatctggagatggatggggatgatggttgcgcaacggtgtggatgtacttCAGCAAGGTGCTGTGGCTCAcgcctgtgtgtctgcgtgctagggtctcgggggttttataggcacaggatgggggcgtggcaggccagggtggtcttgggaaatgcaacatttgggcaggaagtgcccgtcctcacctaggtctgtgagggtggagccctagccagggaccacgccctcctctgcccagcacttcccttccctcttctgtattatttaaagggactacacccttcccttcccagcacttctttatcaccacttagaaaggccattatcaaaaagacaaaaaataacaagtggtggctaggatgcagagaaaaggggactcttgtgcactgttgaaggcaacaagaaggagtgtggtcattacaggaaacagtacataggttcctcataaaactaaaaagagaaccaccctatgacccagccagcccagttctgggtatagatcgaaaggaaaggcaatcagtatattgaaaggatagcttcaccctggtgtttactgcagcactattcacaataaccaagatttggaagcaacctaagtgtttatgtacagatgaatggataaggaaaatgtggtacatttacacaatggaatattacccagtcgttaaaaagaatgaaatcctgtcatttgtggcaacacggatgagcctggaggaaa------taagtgagataagccaggcatagaaagacaaaggtagcgtgttcttactcatgtgtgggagttaaaacagttgatctcagaagcagagagcagagtcgtggtaactagaggctgggaagggtgggaagaggggagagggaaatgctggttaaaggatacagaat s panTro4.chr19 59611424 1171 + 63644993 gacataaactgtagtgtagacatacagtagagtatgtatgtcttacaaggaatgaaatcatgattgccacattctacaacacggatgaaacttgaagatgttatgcaaactgaaatcaggcaatcacaaaaagacaagtattgtatgattctttttatatgaagtgcatagaaaaggcaaacccatagagacagaaagtagaatattggcttccaggggctggggttgggggagagaaaatgggaattggtatttaatgcatacagattttcagtttaggatcgtgaaaaagatctggagatggatggggatgatggttgcgcaatggtatggatgtacttC--CAAGGTGCCGTGTCTCAcgcctgtgtgtctgcgtgctagggtctcgggggttttataggcacaggatgggggcgtggcaggccagggtggtcttgggaaatgcaacatttgggcaggaagtgcacgtccttacctaggtctgtgagggtggagccctagccagggaccacgccctcctctgcccagcacttcccttccctcttctgtattatttaaagggactacacccttcccttcccagcactt-tttatcaccacttagaaaggccattatcaaaaagacaaaaaataacaagtggtggctaggatgcagagaaaaggggactcttgtgcactgttgaaggcaacaagaaggagtgtggtcattacaggaaacagtacataggttcctcataaaactaaaaagagaaccaccctatgacccagccagcccagttctgggtatagatcgaaaggaaaggcaatcagtatattgaagggatagcttcaccccggtgtttactgcagcactattcacaataaccaagatttggaagcaacctaagtgtttatgtacagatgaatggataaggaaaatgtggtacatttacacaatggaatattacccagtcattaaaaagaatgaaatcctgtcatttgtggcaacatggatgagcctggaggaaa------taagtgagataagccaggcatagaaagacaaaggtagcatgttcttactcatctgtgggagttaaaacagttgatctcagaagcagagagcagagtcgtggtaactagaggctgggaagggtgggaagaggggagagggaaaggctggttaaaggatacagaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56538125 1132 + 60714840 gacgtaaactgtagtgtagacatacagtagagtatgtatgtcttacaaggaatgaaattatgattgccacattctacaacacaggtgaaacttgaagatgttatgcaaactgaaatcaggcaatcacaaaaagacaagtattgtatgattctatttatatgaagggcatagaataggcaaacccatagagacagaaagtagaatattggctttcaggggctggggttgggggagagaaaatgggagttggtatttaatgcatacagattttcagtttaggattgtgaaaaagatctagagatggatggggttgatggttgcgcaacggtgtggatgtacttCGGCAAGGTGCCGGGGCGCATgcctgtgtgtctgcttgctagggtctcaggggttttatacgcacaggatgggggcatggcaggccagggtggtcttgggaaatgcaacatttgggcaggaaatgcccatcctcacctaggtctgtgagagtggagccctagccagggaccacgcccccctctgcccagcactt--cttccctcttctgtattaTTTAAAGGGACTACACCCTTCCCTTCCCAGCACTTCcttatcgccgcttagaaaggccattatcaaaaagacaaaaaataaca--------------------------------cttgtgcactgttgaagggaacgagaaggagtgtggtcattacaggaaacagtacataggttcctcataaaactaaaaagagaaccaccctatgacccagccatcccagttctgggtatagatcgaaaggaaaagcaatcagtatattgaagggatagcttcacccc-gtgtttattgcagcactattcacaataaccaagatttggaagcaacctaagtgttcgtgtacagatg-------------aatgtggtacatatacacaatggaatattatccagtcattgaaaagaatgaaatcctgtcatttgtggcaatgtggatgagcctggaggacattatattaagtgagataagccaggcatagaaagacaaaggtagcatgttcttactcatctgtgggagttaaaacagttgatctcagaagcagagagcagagtcgtggtaactagaggctgggaagggtgggaagaggggagagggaaaggctggttaaaggatacagaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 103181417 47045 - 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 55591598 3344 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=0.000000 s hg38.chr19_GL949753v2_alt 418966 609 + 796479 tacagctagatggaggaaataataagttctggtatcctacagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataagttctggtatcctatagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataataagttctggtatcctacagcaccgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataagttctggcatcctatagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataagttctggtaccctacagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataagttctggtatcctacagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataagttctggtatcctatagcactgtagggtgactatagttaacaatagtttactgtacagctagatggaggaaataataagttctggtatcctacagcactgtagggtgactatagttaacaatagtttactg e canFam3.chr1 19852566 51999 - 122678785 I e ponAbe2.chr19 56539257 0 + 60714840 C e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 103181417 47045 - 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 55591598 3344 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I e panTro4.chr19 59612595 0 + 63644993 C a score=31977.000000 s hg38.chr19_GL949753v2_alt 419575 133 + 796479 tacagctagatggaggaaataagttctggtatcctacagcactgtagggtgactatagttaacaatagtttactgt----atattttc-TTTTTTAGATGTTTTTATTATACTTTAAGTTCTAGCGTATCCTAGAAGC s panTro4.chr19 59612595 133 + 63644993 tacagctagatggaggaaataagttctggtatcctatagcactgtagggtgactatagttaacaatagtttactgt----atattttc-TTTTTTAGATGTTTTTATTATACTTTAAGTTCTAGGGTACCCTAGAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539257 138 + 60714840 tacagctagatggaggaaataagttctggtatcctacagcactgtagggtgactatagttaacaatagtttattgttaacttattttctttttttaattttttttattaGACTTTAAGTTCTAGGGTACCCTAGAATC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 103181417 47045 - 106955855 T e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 55591598 3344 + 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=87274.000000 s hg38.chr19_GL949753v2_alt 419708 133 + 796479 TTTATTCAGTACTGAATCCCAAAGTCTTTGCATATTAACTGGCATAATATATGAGCCTACAAACATTAGGGTGGGGGACAGTGAAAAAATAAATGATGCAACCCTCTGCAGGGAACTTATAGCCCAGAGACCA s panTro4.chr19 59612728 133 + 63644993 TTTATTCAATACTGAATCCCAAAGTCTTTGCATATTAACTGGCATAATATATGAGCCTACAGACATTAGGGTGGGGGACAGTGAAAAAATAAATGATGCAACCCTCTGCAGGGAACTTATAGCCCAGAGACCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539395 133 + 60714840 TTTATTCAATACTGAATCCCAAAGTCTTTGCATATTAACTGTCATAATATATGAGCCTACAAACATTAGGGTGGGGGACAGTGAAAAAATAAATGATGCAATCCTCTGCAGGGAACTTATAGCCCAGAGACCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3774673 130 + 106955855 TTTATTCAATACTGAGTCCCAAAGTCCTTGCATATTAGCTGGCATAATGTATGATCCAACAAATACT---GTGAGGAGAAGTGACTAAATAAAGGATGCAATTGTCCAGAGGGAACTTAGAGCCCAGAGATCA i nomLeu3.chr10 T 86282 C 0 s macFas5.chr19 3656688 130 - 59248254 TTTATTCAGTAATGAATCCCAAAGTCCTGTCACGCTGACTGGCATAATGCAAGAGGCTACATATATT---GAGAAAGAAAGTGATTAAATAAATGATGCAATGTTGTAGAGGAAACTTAGAGCCCAGATACCA i macFas5.chr19 n 3344 n 3344 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 419841 1 + 796479 C s panTro4.chr19 59612861 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539528 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3774803 1 + 106955855 C i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e papAnu2.chr19 47662690 3334 + 51301725 I e macFas5.chr19 3656818 3344 - 59248254 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=2375.000000 s hg38.chr19_GL949753v2_alt 419842 4 + 796479 TC-tt s panTro4.chr19 59612862 4 + 63644993 TC-tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539529 5 + 60714840 TCTtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3774804 4 + 106955855 AC-TT i nomLeu3.chr10 C 0 n 0 s macFas5.chr19 55594942 4 + 59248254 tc-TT i macFas5.chr19 I 3344 C 0 s papAnu2.chr19 47666024 4 + 51301725 tc-tt i papAnu2.chr19 I 3334 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e chlSab2.chr6 47347932 5036 + 50890351 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=2385.000000 s hg38.chr19_GL949753v2_alt 419846 9 + 796479 ------tttttatta- s panTro4.chr19 59612866 9 + 63644993 ------tttttatta- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539534 9 + 60714840 ------tttttatta- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55594946 16 + 59248254 TTTTTAAttttatttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47666028 16 + 51301725 ttttaaattttatttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 3774808 0 + 106955855 I e chlSab2.chr6 47347932 5036 + 50890351 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=665061.000000 s hg38.chr19_GL949753v2_alt 419855 543 + 796479 ttattatactttacgttctggggtacacgtgcagaacgtgcaggcttgttacataggtatacatgtgccatgttggcttgctgcacccatcgactcgtcatttacattaggtatttctcctaatgctatccct--------cccccagccccccagccccagacagtccccagtgagtgatgttccccgccctgtgtccaggtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtgtactgagaatgatggtttccagcttcatccatgtccctgcaagggacataaactcatccttttttatagctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacagtaaacatacgtgtgcatgtatctttataatagcatgatatataattctttgggtatatacccagtaatgggattactgggtcaaatggtatttctagtcct s panTro4.chr19 59612875 542 + 63644993 ttatgatactttacgttctggggtacacgtgcagaacgtgcaggcttgttacataggtatacatgtgccatgttggcttgctgcacccatcgactcgtcatttacattaggtatttctcctaatgctatccct--------cccctagccccccagccccggacagtccccagtgagtgatgttccccgccctgtgtccaggtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtgtactgagaatgatggtttccagcttcatccatgtccctgcaaaggacataaactcatccttttt-atggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacagtaaacatacgtgtgcatgtatctttataatagcatgatatataattctttgggtatatacccagtaatgggattactgggtcaaatggtatttctagtcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56539543 551 + 60714840 ttagtatactttatgttctggggtacatatgcagaagatgtaggtttgttacatatgtatacatgtgccatgttggtgtgctggacccatcaactcgtcatttacgttaggtatttctcctaatgctatccctcccccagccccccagccccccagcccccaacaggccccaatgagtgatgttccccaccctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaagggcacgatctcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaacagtgcagcaataaacatatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatgcccagtaatgggatggctgggtcaaatggtatttctagttgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55594962 542 + 59248254 ttattagactttaagttctagggtacatgtgtagaacgtgcaggtttgttacataggtatgcatgtgccatgttggtttgctgcacccatcaactcgtgatttacattaggtatttctcctaatactctctct--------cccccagcccccca-cccccgacaggccccggtgtgtgatgttccccaccctgtgtccatgtgttctcatgattcacctcccacatattagtgagaacatgcagtgtttggtttcctgtccttgcgatagtttgctgagaattatggtttccaacttcatccatgtccctgcaaaggacataaacttatccttttttatggctgcatagtattccatggtgtgtatgtgccacattttcctaatccagtctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacagtaaacgtatgtgtgcatgtatctttatagcagcatgatttataatcctttgggtatatacccaggaatgggatggctgggtcaaatggtatttctagttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47666044 542 + 51301725 ttattagactttaagttctagggtacatgtgtagaacgtgcaggtttgttacataggtatgcatgtgccatgttggtttgctgcacccatcaactcgtgatttacattaggtatttctcctaatgctatctct--------cccccagcccccca-cccccgacaggccccggtgtgtgatgttccccaccctgtgtccaagtgttctcatgaTTCACCTCCcacatattagtgagaacatgcagtgtttggttttctgtccttgtgatagtttgctgagaattatggtttccaacttcatccatgtccctgcaaaggacgtaaacttatccttttttatgactgcgtagtattccatggtgtgtatgtgccatattttcctaatccagtctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacagtaaatgtatgtgtgcatgtgtctttatagtagcatgatttataatctgttgggtatatactcagtaatgggatggctgggtcaaatgctatttctagttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47352968 542 + 50890351 ttattagactttaagttctagggtacatgtgtagaacgtgcaggtttgttacataggtatgcacgtgccatgttggtttgctgcacctatcaactcgtgatttacattaggtatttctcctaatactctctct--------cacccagcccctca-cccccgacaggccccagtgtgtgatgttccccaccctgtgtccaagtgttctcatgattcacctcccacatattagtgagaacatgcagtgtttggtttcctgtccttgcgatagtttgctgagaattatggtttccaacttcatccatgtccctgcaaaggacataaacttttccttttttatggctgcatagtattccatggtgtgtatgtgccacattttcctaatccagtctgtcattgatggacatttgggttgattccaagtctttgctattgtgaatagggccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccaggaatgggatggctgggtcaaatggtatttctagttcc i chlSab2.chr6 I 5036 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 3774808 0 + 106955855 I e rheMac3.chr19 60490446 5736 + 64156825 I a score=792132.000000 s hg38.chr19_GL949753v2_alt 420398 450 + 796479 agatccttgaggaatcgccacactgtcttccataatggttgaactaatttacactcccaccaacagtgtaaaagatttcctgtttctccacatcttctccagcatctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcatagtggttttgagttTATTGTATGTTTTCAAAGAGctagaactcctgggctcaagtgatccacctgccttggcctcccagagtgctgggattaAGTGCGTC--TTTATTATAacttataattgacacataataattgtatatatttgtagggtatagagttgatatttcaacacatatatataatgtgtaatggttaaataagagtaatgaacatatccgccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctctcttctagctatctgaaaa s panTro4.chr19 59613417 441 + 63644993 agatccttgaggaatcgccacactgtcttccataatggttgaactaatttacattcccaccaacagtgtaaaagatttcctatatctccacatcttctccagcatctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcatagtggttttgagttTATTGCATGTTTTCAAAGAGctagaactcctgggctcaagtgatccacctgccttggcctcccagagtgctgggattaAGTGTGTC--TTTATTATAacttataattggcacataataattgtatatatttgtagggcatagagttgatatttcaacacatatatataatgtgtaatggttaaataagagtaatgaacatatctgccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctct---------atctgaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540094 452 + 60714840 agatccttgaggaatcactacactgtcttccacaatggttgaactaatttacactcccaccaagagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcctgactttttaatgattgccattctaactggcatgagattgtatctcatagtggttttgagttTATTGTATGTTTTCAAATAGctagaactcctgagctcaagtgatctgcctgccttggcctcccagagtgctgggattaAGTGTGTCTTTTTATTATAacttataattgacacataataattgtatatgtttgtagggtatagagctgatatttcaacacatgtatataatgtgtaatggttaaatgagagtaattaacatatccgccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctctcttctagctctctgaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60496182 450 + 64156825 agatccttaaggaatcgccacactgtcttccacaatggttgaactaatttagactcccactaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatggtcattctaactggcatgagatggtatttcatcgtggttttgagttTATTGTATATTTTCAAATAGctagaactcctggactcaagtgatccgcttgccttggcctcccagagtgctgggatGAAGTGTGTCTTTTTATTATAacttttaattgacacacaataatcgtatatatttgtagggtatagagttgatattgcaacacgtgtatataa--tgtaatggttatataagggtaattaacatatccaccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctcttttctagctatctgaaaa i rheMac3.chr19 I 5736 C 0 s macFas5.chr19 55595504 450 + 59248254 agatccttaaggaatcgccacactgtcttccacaatggttgaactaatttagactcccactaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatggtcattctaactggcatgagatggtatttcatcgtggttttgagttTATTGTATATTTTCAAATAGctagaactcctggactcaagtgatctgcttgccttggcctcccagagtgctgggatGAAGTGTGTCTTTTTATTATAacttttaattgacacacaataatcgtatatatttgtagggtatagagttgatattgcaacacgtgtatataa--tgtaatggttatataagggtaattaacatatccaccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctcttttctagctatatgaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47666586 450 + 51301725 agatcgttaaggaatcgccacactgtcttccacaatggttgaactaatttagactcccactaacagtgtaaaactgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatggtcattctaactggcatgaaatggtatctcatcgtggttttgagtttattgtatattttcaaatagctagaactcctgggctcaagtgatccgcttgccttggcctcccagagtgctgggatgaagtgtgtctttttattataacttttaattGACACACAATAATCGTATATATTTGTAGGGTATAGAGTTGATATTGCAACACATGTATATAA--TGTAATGGTTATATGAGGGTAATTAACATATCCGCCATTTCAAACATTTATCGTTTCTTTGTgctgaaaacattcaaaatcctcttttctAGCTATCTGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47353510 450 + 50890351 agatccttgaggaatcaccacactgtcttccacaatggttgaactaatttagactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgtcattctaactggcatgagatggtatctcatcgtggttttgagttTATTGTATATTTTCAAATAGctagaactcctgggctcaggtgatccgcttgccttggcctcccagagtgctgggatGAAGTGTGTCTTTTTATTATAacttttaattgacacacaataatcgtatatatttgtagggtatagagttgatattgcaacacatgtatataa--tgtaatggttatataagggtaattaacatatccgccatttcaaacatttatcgtttctttgtgttgaaaacattcaaaatcctcttttctagctatctgaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19852566 51999 - 122678785 I e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 3774808 0 + 106955855 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 420848 1 + 796479 t s panTro4.chr19 59613858 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540546 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60496632 1 + 64156825 t i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55595954 1 + 59248254 t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47667036 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47353960 1 + 50890351 t i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102930908 1 + 122678785 T i canFam3.chr1 T 32183 C 0 e calJac3.chr22 3359296 0 - 49145316 I e nomLeu3.chr10 3774808 0 + 106955855 I a score=128101.000000 s hg38.chr19_GL949753v2_alt 420849 67 + 796479 atacaataaac--tcttAATGAGTCAATAGGTTGTCGTTGGTGGCACTTCTTGTGGTTATAGGGATTAC s panTro4.chr19 59613859 67 + 63644993 atacaataaac--tcttAATGAGTCAATAGGTTGTCGTTGGTGGCACTTCTTGTGGTTATAGGGATTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540547 67 + 60714840 atacaataaac--tcttAATGAGTCAATAGGTTGTCGTTGGTGGCGCTTCTCATGGTTACAGGGATCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103134372 69 - 106955855 ACATAATAATCCTTATCAACAAGTATGTAGACTGATGATCATAGCACTTTTTATCATCAGAAGGACGAC i nomLeu3.chr10 T 47045 C 0 s rheMac3.chr19 60496633 66 + 64156825 acataataaaC---CTTAATGAGTCAATAGGTTGCCGTTGGTGGTGCTTCTCATCATTACGGGGGTTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55595955 66 + 59248254 acataataaaC---CTTAATGAGTCAATAGGTTGCCGTTGGTGGTGCTTCTCATCATTACGGGGGTTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47667037 66 + 51301725 ACATAATAAAC---CTTAATGAGCCAATAGGTTGCCGTTGGTGGTGCTTCTCATCATTACGGGGGTTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47353961 66 + 50890351 acataataaaC---CTTAATGAGTCAATAGGTTGCCGTTGGTGGTGCTTCTCATCATTACGGGGGTTAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102930909 65 + 122678785 ATATGGTAATT---CCTATTAA-TCAGTAGCTTATTGTCCATAGCACTGTTTACCATTATCAGGACCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 3359296 0 - 49145316 I a score=49131.000000 s hg38.chr19_GL949753v2_alt 420916 17 + 796479 TCTTTGCTGTCCGTGTT s panTro4.chr19 59613926 17 + 63644993 TCTTTGCTGTCCGTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540614 17 + 60714840 TCTTTGCTGTCCGTGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103134441 17 - 106955855 TCTTGGTTGTCTATTTT i nomLeu3.chr10 C 0 T 32794 s rheMac3.chr19 60496699 17 + 64156825 TCTTTGCTGTCCGTGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55596021 17 + 59248254 TCTTTGCTGTCCGTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47667103 17 + 51301725 TCTTTGCTGTCTGTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47354027 17 + 50890351 TCTTTGCTGTCCGTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45789858 17 + 49145316 TCTTGGTTGTCCATTCC i calJac3.chr22 I 125 C 0 s canFam3.chr1 102930974 17 + 122678785 CCTCTCATGTCCATTCT i canFam3.chr1 C 0 C 0 a score=387507.000000 s hg38.chr19_GL949753v2_alt 420933 158 + 796479 TGTTGAATGGTTCATTTCTTACACACCTAATTATCCATGGAAGGTAGTTCTTAGTGCTCTCCTGGGGGTCAGACTGAAAAAGAGGGGATTGTTCCAGCTATCCCTGCTGCATGATCTCAACTCCTCCAAACATATCATCTGCTTAGGGTTTTGCCCAG s panTro4.chr19 59613943 158 + 63644993 TGTTGAATGGTTCATTTCTTACACACCTAATTATCCATGGAAGGTAGTTCTTAGTGCTCTCCTGGGGGTCAGACTGAAAAAGAGGGGATTGTTCCAGCTGTCCCTGCTGCATGACCTTTACTCCTCCAAACATATCATCTGCTTAGGGTTTTGCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540631 158 + 60714840 TGTTGAATGGTTCATTTCTTACACACCTAATTATCCATGGAAGGTAGTTCTTAGTGCTCTCCTGGGAGTCAGACTGAAAAAGAGGGGATTGCTCCAGCTGTCCCTGCTGCAAGACCTCTACTCCTCCAAACATATCATCTGCTTAGGGTTTTGCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103101664 146 - 106955855 TGTGGGGCAGCTCTCCTCCCACGCACCTGGCCTTTCATAAAGAGTTTCTCCCACGGCTGTCC-AGGCATCAGCCTGATGA--AGGGGATTGTTGCCGCTGCTCCTG---------CCCCACTCTCCCAAACTTAGCGTCAGCTCAAGATTGTACCCAG i nomLeu3.chr10 T 32794 C 0 s rheMac3.chr19 60496716 156 + 64156825 TGTTGAATGGTTCATTTCTTACACACCTAACTGTCCATGCAAGGTAGTTCTTAGTGCTCTCCTGGGAGTCAGACTGAAAAAGA--GGATTGTTCCAGCTGTCCCTGCTGCATGACCTCTACTTCTCCAAATATATCATCTGCTTAGGGTCTTGCCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55596038 156 + 59248254 TGTTGAATGGTTCATTTCTTACACACCTAACTGTCCATGCAAGGTAGTTCTTAGTGCTCTCCTGGGAGTCAGACTGAAAAAGA--GGATTGTTCCAGCTGTCCCTGCTGCATGACCTCTACTTCTCCAAATATATCATCTGCTTAGGGTCTTGCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47667120 158 + 51301725 TGTCGAATGGTTCATTTCTTACACACCTAACTGTCCATGCAAAGTAGTTCTTAGTGCTCTCCTGGGAGTCAGACTGAAAAAGAGGGGATTGTTCCAGCTGTCCCTGCTGCATGACCTCTACTTCTCCAAATATGTCATCTGCTTAGGGTCTTGCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47354044 158 + 50890351 TGTCGAATGGTTCATTTCTTACACACCTAACTGTCCATGCAAGGTAGTTCTTAGTGCTCTCCTGGGAGTCAGACTGAAAAAGAGGGGATTGTTCCGGCTGTCCCTGCTGCATGACCTCTACTTCTCCAAATATGTCATCTGCTTAGGGTCTTGCCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45789875 146 + 49145316 TGTTGGGTGGCTCTCCTCCCACACACCTGGCCTCTCACAAAGGGTTCTCCCGAG-GCTGTCCCTGCA-TCAGCCTGATGAAGG-GGGATTGTTGCCGCTGCTCCTG---------CCCCACTCTCCCAAACTTAGCGTCAGCTCAGGATTGTGCCCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102930991 153 + 122678785 TGTTGGAC-GCTCTCCTCCTACATACCCGTTCGTACAAGAAGGGTTTCTCCTGAGGCTGTTCTGGGAGTCAGGCTGAACTTGA-GAGACAATTGCAGCT---TCTGATCCGTGGTGTCTACTCTTTCAAATTCAGCATCTGCTCAGGGTTGTATTAGG i canFam3.chr1 C 0 I 2254 a score=2229321.000000 s hg38.chr19_GL949753v2_alt 421091 919 + 796479 CACAGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACACCCATATCTGACAATGTCGCGGTGAATCTGTTTCACACAAACAAGG-GAGATGATTCAGTGTGGACCACGGGCCCATGTCAATGAGCAGAGATATTTCCAGCGCCTGTCCACACACACAGGGGAGGAGGAACC-ACAGCTTCCAGCCTCACCCAAAGCCCTGAC-TCCTCCCTGCCTGTGAGGACCTGGGGTTCCTCTTCTGTCCCACACACAGAGGTGGAAATC----TC--CCCCACTAATGAGCCCTGGGTGGTCCCAGGCACCAGTGGTCCCTCAGCTCTGGTCTATGATCTGTCTTACGGCACCCTGTCTATTTCAGGAATTTGTTATTTAACTTTTTCTACATTAAGACCATGA----CTACAGGATTCAGAAATATCGTAACTAG-GTTTCTCAGTGTTCAAAGTTGACGTCGGCTCTTCA-TGGGGGCATCAATCATCGTCCTCCACTGTGGAGCCCAACATCAGGATCCTCTCCCATCCC-CACCCTCCTGTCTTAACTGGTCTAGAAATTAACCATGGCTGAG------CCCCTCCCATGTCCTGGGCACCACtga-cccccatag--ccactgtgatgagtggggatcatgacaaca-ggctccaaacgtggaaattgaggctcagggatgggatattacttcccaaggtcacacaggcaggggatgat-aatcaggaattaaataaaagtcacctcccaacccaatgtccgAAATCAGAGCTCAAACCTA-ACGTAATTGCTCCAAAAACCTTAAACGTGGAT-------TAAGGCACAGA-GGAAGGCC-CAGGAAGTGAGGGGCACT-----------GAGAAGGCAGGAATGACTTAGAGGTTTGTTCTCAGGGGTG---GGGGGTGGATGCTGCTGCAA-Aaagaaaggaaggaaagacagagggaag s panTro4.chr19 59614101 918 + 63644993 CACAGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACACCCATATCTGACAATGTCGCAGTAAATCTGTTTCACACAAACAAGG-GAGATGATTCAGTGTGGACCACGGGCCCATGTCAATGAGCAGAGATATT-CCAGCGCCTGTCCACACACACAGGGGAGGAGGAACC-ACAGCTTCCAGCCTCACCCAGAGCCCTGAC-TCCTCCCTGCCTGTGAGGACCTGGGGTTCCACTTCTGTCCCACACACACAGGTGGAAATC----TC--CCCCACTAATGAGCCCTGGGTGGTCCCAGGCACCAGCGGTCCCTCGGCTCTGGTCTATGATCTGTCTTACAGCACCCTGTCTATTTCAGGAATTTGTTATTTAACTTTTTCTACGTTAAGACCATGA----CTACAGGACTCAGAAATATCGTAACTAG-GTTTCTCAGTGTTCAAAGCTGACGTCCGCTTTTCA-TGGGGGCATCAATCATCCTCCCCCACTGTGGAGCCCAACATCAAGATCCTCTCCCGTCCC-CACCCTCCTGTCTTAACTGGTCTAGAAATTAACCATGGCTAAG------CCCCTCCCATGTCCTGGGCACCACTGA-CCCCCACAG--CCACTGTGATGAGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaactgaggctcagggatgggatattactgcccaaggtcacacaggcaggggatgat-aatcaggaattaaataaaagtcacctcccaacccaatgtccGAAATCAGAGCTCAAACCTA-ACGTAATTGCTCCAAAAACCTTAAACGTGGAT-------TAAGGCACAGA-GGAAGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGAATGACTTAGAGGTTTGTTCTCAGGGGTG---GGGGGTAGATGCTGCTGCAA-Aaagaaaggaaggaaagatggagggaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56540789 906 + 60714840 CATGGGAGGGTCTAG----TGTGAACCTCACACTCACACATGGG-----ACAGACACCCATATCTGACAATGTTGCAATGAATCTGTTTCACATAAACAAGG-GAGATGATTCAGTGTGGACCACGGGCCCAGGTCAATGAGCAGAGATATT-CCAGTGCCTGTCCACACACACAGGGGAGGAGGAACC-ACAGCTTCCAGCCTCACCCAGAGCCCTGAC-TCCTCCCTGCCTGTGAGGACCTGGGGTTCCTCTTCTGTCC--CACACAGAGGTGGAAATC----TC--CCCGACTAATGAGCCCTGGGTGGTCCCAGGAACCAGTGGTCCCTCGGCTCTGGCCTATGATCTGTCTTCCGGCACCCTGTCTATTTCAGTAATTGGTTATTTAACTTTTTCTATG-TAAGACCATGA----CTACAGGATTCAGAAATATCGTAAGTAG-GTTTCTCAGTGTTCAAAGCCGACGTCGGCTCTTCA-TGGGGGCATAAATCATCCTCCTCCACTGTGGAGCCCAACACCAGGATCCTCTCCCATCCC-AACCCTCCTGTCTTAACTGGTCTGGAAATTAACCATGGCTGAG------CCCCTCCCATGTCCTGGGCACCACTGA--CCCCACAG--CCACTGTGATGTGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaattgaggctcagggttgggatattactgcccaaggtcacacaggcaggggatgat-aatcaagaattaaataaaa-ttgcctcccaacccaatgtccGAAATCAGAGCTCAAACCTA-ACGTAATTGCTCCAGGAACCTTAAACGTGGAT-------TAAGGCGCAGA-GGAAGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGGATGACTTAGAAGTTTGTTCTCAGGGGTG----------GATGCTGCTGCAA-Aaagaaaggaaggaaagaaggagggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103101810 889 - 106955855 CAGGGATGGGACCAA----TGCCAGCCTCACACTCACCTGTGGGGCAGAGCAGACGCCCATGTCTGACCACCGTGGGTTGAATCTGCTTCTCACACACAGGG-GAGG-GGCTGAGAGCTGACCATGGCCTCCAGTGAGTGAGCAGAGACCCC-CCAGCGCCTGTCCACACACACAGGGGAGGGGGAGCC-ACAGCTTCCAGCCTCACCCAGAGCCCTGAC-CCCTCCCTGCCTGGGAGGACCTGGGGTTCCTCTTCTGTCC--CACACGGAGGTGGGAACC----TCCTCCTCCCTGATGAA-GCTGGGTGGTCCCAGACACCTGTGGCCACTCGGCACTGAACTCTGCTCATTGAAGGGGATGCGTCTCCACGTGAGGAACT-GTTCTTCCTCTTTCCGTGCC-TGTGGCTGTGATGATCTGCATATTTCAGACGGATCACAAGGAGAATTTCATGGTATTTAGAGCCGATGTGGGCTCTTGAGTGGGGGCGTCAATCA---TCCTCCACTGTGGAGCCCAATACCAGGATCCTCTCCCGTCCC-CGCCCTCCTGTCTGAACTGGTCTGGAAATTCACCCTGGCTGAG--------CCTCCCAAGTCCTGGGCACCACTGA--CCCCACAG--CCACTGTGATGAGTGGGGTTCATGACAACa-ggctc-----------------------agaggtgacattcttgtccaaggtcacataaacc-tggatgat-aatcaggaattgaatgcagatcagctcccctccC-----CCAGAATCAGATTACAGACCTA-ACA-AATTGTTCTGAAAACCCTGAACATGGAC-------GGAGGTGCTGAGGGAAGGCC-AAGGACACAAGGGGCACT-----------GAGGAGGCGGGACCGACTCAGAGGCTCATTCCCAGGGTTG----GGGGTGGGTGATGTTGCGA-CAAAGAAAAAAGGGGAAGCACAGGAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60496872 918 + 64156825 CACGGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACGCCCATATCTGACCATGTTACAGTGAATCTGTTTCACACAAAAAAGG-GAGATGATCCAGTGTGGACCCTGGACCCAGGTCAATGAGCAGAGATATT-CCAGCGCCTGTCCCCGCACACAGGGGAGGAGGAACC-ACAGTTTCCAGCCTCACCCAGAGCCCTGAC-TCCTTTGTGCCTGTGAGGACCTGGGGTTCCTCTTCTGTGC--CACACAGAGGTGGAAATC----TC--CCCCGCTAATGCGCCCTGGGTGGTCCCAGGCATCAGTGGTCCCTCAGCTCTGGTCGATGATCTGTCTTATGGCACCCTGTCTATTTCAGGAATTTGTTATTTAACTTTTTCTACG-TAAGACCGTGA----CTACATGATTCGGAAATATCGTACGTAG-GTTTCTCGGTGTTCAAAGCCAATGTGGGCTCTTGA-TGGCAGCATCAA------TGCTCCACGGTGGAGCCCAACATCAGGATCCTCTCCCGTCCT-AACCCTCCTGTCTTAACTCGTCTGGAAATTCACCATGGCTGAGACTGAGCCACTCCCTTGTCCTGGGCACCGCTGC-ACTCCACGG--CCACTGTGATGAGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaactgaggctcaaggatgggatattactgcccaaggtcacacaggcaggggatgat-aatcaggaactaaataaaagtcatctcccaacccagcgtccGAAATCAGAGCTTAAACCTA-ATGTAATTGCTCCAAAAACCTCAAACGTGGAT-------TAAGGCACAGA-GGATGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGAATGACTTAGAGGTTTGTTCTCAGGGATGGGTGGGGGTGGAGGCTGCTGCAA-AAAGAaaggaaggaaagaaggagggaag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55596194 918 + 59248254 CACGGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACGCCCATATCTGACCATGTTACAGTGAATCTGTTTCACACAAAAAAGG-GAGATGATCCAGTGTGGACCCTGGACCCAGGTCAATGAGCAGAGATATT-CCAGCTCCTGTCCCCGCACACAGGGGAGGAGGAACC-ACAGTTTCCAGCCTCACCCAGAGCCCTGAC-TCCTTTGTGCCTGTGAGGACCTGGGGTTCCTCTTCTGTGC--CACACAGAGGTGGAAATC----TC--CCCCGCTAATGCGCCCTGGGTGGTCCCAGGCATCAGTGGTCCCTCAGCTCTGGTCGATGATCTGTCTTATGGCACCCTGTCTATTTCAGGAATTTGTTATTTAACTTTTTCTACG-TAAGACCGTGA----CTACATGATTCGGAAATATCGTACGTAG-GTTTCTCGGTGTTCAAAGCCAATGTGTGCTCTTGA-TGGCAGCATCAA------TGCTCCACGGTGGAGCCCAACATCAGGATCCTCTCCCGTCCT-AACCCTCCTGTCTTAACTCGTCTGGAAATTCACCATGGCTGAGACTGAGCCACTCCCTTGTCCTGGGCACCGCTGC-CCTCCACGG--CCACTGTGATGAGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaactgaggctcaaggatgggatattactgcccaaggtcacacaggcaggggatgat-aatcaggaactaaataaaagtcatctcccaacccagcgtccGAAATCAGAGCTTAAACCTA-ATGTAATTGCTCCAAAAACCTCAAACGTGGAT-------TAAGGCACAGA-GGATGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGAATGACTTAGAGGTTTGTTCTCAGGGATGGGTGGGGGTGGAGGCTGCTGCAA-AAAGAAAGGAAGGAAAgaaggagggaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47667278 918 + 51301725 CACGGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACGCCCACATCTGACCATGTTACAGTGAATCTGTTTCACACAAACAAGG-GAGATGATCCAGTGTGGACCCTGGACCCAGGTCAATGAGCAGAGATATT-CCAGCACCTGTCCACGCACACAGGGGAGGAGGAACC-ACAGTTTCCAGCCTCACCCAGAGCCCTGAC-TCCTTCGTGTCTGTGAGGACCTGGGGTTCCTCTTCTGTGC--CACACAGAGGTGGAAATC----TC--CCCCGCTAATGAGCCCTGGGTGGTCCCAGGCATCAGTGGTCCCTCAGCTCTGGTCTATGATCTGTCTTATGGCACCCTGTCTATTTCAGGAATttgttatttaactttttctaCG-TAAGACCGTGA----CTACATGATTCGGAAATATCGTACGTAG-ATTTCTCGGTGTTCAAAGCCAATGTGGGCTCTTGA-TGGCAGCATCAA------TGCTCCACGGTGGAGCCCAACATCAGGATCCTCTCCCATCCT-AACCCTCCTGTCTTAACTCGTCTGGAAATTCACCATGGCTGAGACTGAGCCCCTCCCTTGTCCTGGGCACCGCTGC-CCTCCACGG--CCACTGTGATGAGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaactgaggctcaaggatgGGATAttactgcccaaggtcacacaggcagGGGATGAT-AATCAGGAACTAAATAAAAGTCATCTCCCAACCCAGCGTCCAAAATCAGAGCTTAAACCTA-ATGTAATTGCTCCAAAAACCTCAAACGTGGAT-------TAAGGCACAGA-GGATGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGAATGACTTAGAGGTTTGTTCTCAGggatgggtgggggtggaggctgctgcaa-aaagaaaggaaggaaagaaggagggaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47354202 918 + 50890351 CACGGGAGGGTCTAG----TGTGAACCTCACACTCACACGTGGG-----ACAGACGCCCATATCTGACCATGTTACAGTGAATCTGTTTCACACAAAAAAGG-GAGATGATCCAGTGTGGACCCTGGACCCAGGTCAATGAGCAGAGATATT-CCAGTGCCTGTCCACGCACACAGGGGAGGAGGAACC-ACAGTTTCCAGCCTCACCCAGAGCCCTGAC-TCCTTTGTGCCTGTGAGGACCTGGGGTTCCTCTTCTGTGA--CACACAGAGGTGGAAATC----TC--CCCCGCTAATGAGCCCTGGGTGGTCCCAGGCATCAGTGGTCCCTCAGCTCTGGTCTATGATCTGTCTTATGGCACCCTGTCTATTTCAGGAATTTGTTATTTAACTTTTTCTACG-TAAGACCGTGA----CTACATGATTCGGAAACATCGTATGTAG-GTTTCTCGGTGTTCAAAGCCAATGTGGGCTCTTGA-TGGCAGCATCAA------TGCTCCACGGTGGAGCCCAATATCAGGATCCTCTCCCGTCCT-AACCCTCCTGTCTTAACTCGTCTGGAAATTCACCATGGCTGAGGCTGAGCCTCTCCCTTGTCCTGGGCACCGCTGC-CCTCCACGG--CCACTGTGATGAGTGGGGTTCATGACAACA-GGCTCcaaacgaggaaactgaggctcaaggatgggatattactgcccaaggtcacacaggcaggggatgat-aatcaggaactaaataaaagtaatctcccaacccagcgtccaAAATCAGAGCTTAAACCTA-ATGTAATTGCTCCAAAAACCTCAAACGTGGAT-------TAAGGCACAGA-GGATGGCC-CAGGAAGTGAGGGGCACT-----------GAGGAGGCAGGAATGACTTAGAAGTTTGTTCTCAGGGATGGGTGGGGGTGAAGGCTGCTGCAA-AAAGAaaggaaggaaagaaggagggaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45790021 893 + 49145316 CAGGGATGGGACCGT----CGCCAGCCTCACACTACCCTGTGGG-----GCAGACGCCTGTGTCTGACAACCGTGGATTCAATCTGTTTTTCACACATGGGG-GAGG-AGCTCAGAGCTGACCACGGACTCCAGTGGGTGAGCAGAGACCCC-CCAGTGCCTGTGCACACACACAGGGGAGGGGG-GCC-ACAGCTTCTAGCCTCACCTAGAACCCTGAC-CCCTCCATGCCTGGGAGGACCTGAGATTCCTCTTCTGTCC--CACACGGAGGTGGGACCC----CCCTCCTCCCTAATGACCCCTGGGTGGTCCCACACACCTGTGGCCACTCAGCTGTGAACTCTGTTCATTGAAGTGGATGCTTCTCAACTGGAGGAACTT-TTCTTCCTCTTTCTCTGCC-TGTGGCTGTGAAGATCTGCAGATTTCAGACGCATCACAAGGAGCATTTCATGGTGTCTGGAGCCGATGTGGGCTCTGGAGTGGGTGCATCAATCATCCTCCTTGACTGTGGAG-CCAACACCAGGGTCCTCTCACATCCC-AACCCTCCTGTCTTAACTGGTCTGGAAATTACCCACGGCCGAG------CCCCTCCCATGTCCTGGGCACCACTGACCCCCCACAG--CCGCTGTGATGAGTGGGGCTCAAGACAACA-GGCTC-----------------------AGAGGTGAGATTAATCTCCAAGGTCACATAAACCATGGATGAT-AATCAGGAATTAAATAAAAATCAGCTCCCCTCCC-----CCAGAATCAGATTACAGACCTA-ACG-AATTGTTCTGAGATCCCTGAACATGGAC-------GGCGGGGCAGAGGGACGGCC-AAGGACAC--GGGGCACTTGTCCTTGTCCAAGGA-----CATCGACCCAGAGGCTC-TTCCCAGG------TGGGGGTGGGTGATACTGCAGCAAAGCAAAAAGGGGAAGCATCAGAGAGG i calJac3.chr22 C 0 I 1679 s canFam3.chr1 19904565 838 - 122678785 CATGGGAAGATCCAGTGGATGGAAACTTTCcacacacacac--------acacacacacacacaca-----------------------cacacacacacGGAGACAAGGCTCTGTTTTGACCTCTCGGCTTGGTCAGTGGGCAGACACATG-CCAGTGCCCTCCCA---ACACATGATGTCAGGGTCTGATGACTTCCAGAGTCACCCAGAGACTTGATGCCCTTCCCGTCTATGAGGACCTG-GCTGCCTGTTCTG-GC--AACACAGGGGCAGAAGTCAAATTT--CACCACTCCAGGCCAC------ACCCCAGGCACTGATGTTCACTCAGCTTTGACCTGTG-TTTCTGTTGTGGT-TCCTCTCAGTTCCAGAGAATTTCAATTCCCTTTCCTCCATT----GGCTTTTG----CAAACAATTTCAGAATCAGTATAAATAGTATTTCTCAGCTTTAGGGGCACATGGGGTCATTCAAGAGTGTGCATCACTGACCCTCCCTCACTGTGGGGTCTGACACTTATA-CTTCTTGTGTCCTGAACACAATAATTTCAATCAGGTTAGGAAACTAACATGATTGA-------TCCCACTCATGGTCCAGGTCCCA--GC-CCCCCACAGAACCACCCTGAGGAGTGGGGTTCA-GACAACACAGTACTACACCAGATCACT----------------------CTGCTAAAAGTCTTG-GGGCAGTGGATGCTGGAGGAGGATCGACCTGAACATCAGCTTTGTTC-------CTCAAATCAGAGCACTCACCCACATATGAT--CTCCTACAATTTGGAGTCAGGATGCCTCTGTAGGATGTTCA-GCTCCGCCATAGGAACAAGGGGGCACT-----------GATGACCCAGGAAGGACTCACAGGAGTGTTCCCAAG-------AAGGGTGA--------GTAA-ATAACATCAAAGGAA------------- i canFam3.chr1 I 51999 C 0 a score=7174.000000 s hg38.chr19_GL949753v2_alt 422010 10 + 796479 ga---------------aggaggga s panTro4.chr19 59615019 25 + 63644993 gagggaaggaagaaggaaggaggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56541695 10 + 60714840 ga---------------gggaggga i ponAbe2.chr19 C 0 I 359 s nomLeu3.chr10 103102699 1 - 106955855 G------------------------ i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60497790 10 + 64156825 ga---------------gggaggga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55597112 10 + 59248254 ga---------------gggaggga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668196 10 + 51301725 ga---------------gggaggga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47355120 10 + 50890351 ga---------------gggaggga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19905403 0 - 122678785 C e calJac3.chr22 45790914 1679 + 49145316 I a score=7198.000000 s hg38.chr19_GL949753v2_alt 422020 6 + 796479 gagagg s panTro4.chr19 59615044 6 + 63644993 gagagg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60497800 6 + 64156825 gggagg i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55597122 6 + 59248254 gggagg i macFas5.chr19 C 0 I 15 s papAnu2.chr19 47668206 6 + 51301725 gggggg i papAnu2.chr19 C 0 I 15 s chlSab2.chr6 47355130 6 + 50890351 gggagg i chlSab2.chr6 C 0 I 625 e canFam3.chr1 19905403 0 - 122678785 C e ponAbe2.chr19 56541705 359 + 60714840 I e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102700 0 - 106955855 C a score=4804.000000 s hg38.chr19_GL949753v2_alt 422026 16 + 796479 gagggag-gaagaggac s panTro4.chr19 59615050 16 + 63644993 gagggagcgaggaaga- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55597143 15 + 59248254 gagagag-gaagagga- i macFas5.chr19 I 15 I 4 s papAnu2.chr19 47668227 15 + 51301725 gagagag-gaagagga- i papAnu2.chr19 I 15 I 4 e canFam3.chr1 19905403 0 - 122678785 C e ponAbe2.chr19 56541705 359 + 60714840 I e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102700 0 - 106955855 C e chlSab2.chr6 47355136 625 + 50890351 I a score=14033.000000 s hg38.chr19_GL949753v2_alt 422042 16 + 796479 ggaaggaaggaaggaa s panTro4.chr19 59615066 16 + 63644993 ggaaggaaggaaggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542064 16 + 60714840 ggaaggaaggaaggaa i ponAbe2.chr19 I 359 C 0 s macFas5.chr19 55597162 16 + 59248254 ggaaggaaagagggaa i macFas5.chr19 I 4 I 286 s papAnu2.chr19 47668246 16 + 51301725 ggaaggaaggagggaa i papAnu2.chr19 I 4 C 0 e canFam3.chr1 19905403 0 - 122678785 C e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102700 0 - 106955855 C e chlSab2.chr6 47355136 625 + 50890351 I a score=-1936.000000 s hg38.chr19_GL949753v2_alt 422058 7 + 796479 aaaaata s panTro4.chr19 59615082 7 + 63644993 AAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542080 7 + 60714840 aaaagga i ponAbe2.chr19 C 0 I 4 s macFas5.chr19 55597464 5 + 59248254 AGAAG-- i macFas5.chr19 I 286 C 0 s papAnu2.chr19 47668262 5 + 51301725 ggaag-- i papAnu2.chr19 C 0 I 225 s canFam3.chr1 19905403 4 - 122678785 AATA--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102700 0 - 106955855 C e chlSab2.chr6 47355136 625 + 50890351 I a score=116911.000000 s hg38.chr19_GL949753v2_alt 422065 85 + 796479 -ggaagtttggtagaaaggaagAGACTGTTCTTGAAGGGACAAGAAAGGGACTGTTTGGCAGAAAGGAAACACACACTCCAGGGAC s panTro4.chr19 59615089 85 + 63644993 -GGAAGTTTGGTAGAAAGGAAGAGACTGTTCTTGAAGGGACAAGAAAGGGACTGTTTGGTAGAACGGAAACACACACTCCAAGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542091 85 + 60714840 -GGAAGTTTAGTAGAAAGGAAGAGACTGTTCTTGAAGGGACAAGAAAGGGACTGTTTGGTAGAAAGGAAACACACACTCCAGGGAC i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 103102700 37 - 106955855 -------------------------------------------------GACTGTTTGGTAGGAAGGAAACACACACTCTCGAAAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55597469 85 + 59248254 -GGAAGTTTGGTAGAAAGGAAGGGATTGTTCTTGAAGGGAAAAGAAAGGGACTGTTTGGGAGAAAAGAAACACACACTCCAGGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668492 85 + 51301725 -ggaagttTGGTAGAAAGGAAGGGATTGTtcttgaagggaaaagaaagggactgtttgggagaaaagaaacacacactcCAGGGAC i papAnu2.chr19 I 225 C 0 s chlSab2.chr6 47355761 85 + 50890351 -GGAAGTTTGGTAGAAAGGAAGGGATTGTTCTTGAAGGGAAAAGAAAGGGACTGTTTGGGAGAAAAAAAACACACACTCCAGGGAC i chlSab2.chr6 I 625 C 0 s canFam3.chr1 19905407 49 - 122678785 GAGAAGTCC-----------------------------------ATAGAGGC--TCTGATAGAAAGAAAGCCCACACTGCAAGGCC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I a score=51459.000000 s hg38.chr19_GL949753v2_alt 422150 28 + 796479 AGAAAAACATATGTTTTATTCTCTTTAT- s panTro4.chr19 59615174 28 + 63644993 AGAAAAACATATGTTTTATTCTCTTTAT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542176 28 + 60714840 AGAAAAACATATGTTTTATTCTCTTTAT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103102737 27 - 106955855 AGAACAA-GTGTGTTTTATTATATTTAT- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60391048 27 + 64156825 AGAACAA-ATATGTTTTATTCTATTTAT- i rheMac3.chr19 N 0 I 315 s macFas5.chr19 55597554 28 + 59248254 AGAAAAACATACGTTTTATTATCTTTAT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668577 28 + 51301725 AGAAAAACATAcgttttattatctttat- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47355846 28 + 50890351 AGAAAAACATACGTTTTATTATCTTTAT- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19905456 27 - 122678785 AGGAGACGGGTTGTTTCCT--TCCTTATT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 422178 1 + 796479 T s panTro4.chr19 59615202 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542204 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103102764 1 - 106955855 T i nomLeu3.chr10 C 0 T 35008 s macFas5.chr19 55597582 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668605 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47355874 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19905483 1 - 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I e rheMac3.chr19 60391075 315 + 64156825 I a score=558768.000000 s hg38.chr19_GL949753v2_alt 422179 348 + 796479 CCCTGCATCTCTCTTGTGTTCTCACTGCCACATGCAGCTCAGCCTCGGCTGCACAGCCAGGTGTC-AGGTGCGTCTCTGCTGATCTGAGTCTGCCTG--CAGCATGGACCTGGGTCTTCCCTGAAGCATCTCCAGGGCTGGAGAATCACTGACCACGGTAAGGACCCCGCAACGCTGAGCTGATGGATGGGCTGAAGGAGGGAGGGAGACCCCAT-GGGGAGGCTCTG-AGCGGGAGGA---------GGTCACCCTCGCCTGAAAGGGGCTGACTCCGGAAGGCATCAGGTCTATTTGCTGTTGTGTCCCGGCTCTCGGTAAGATAAAGACAGATCAGGCAGACAGTGGCCTGGGGGCAGG s panTro4.chr19 59615203 348 + 63644993 CCCTGCATCTCTCTTGTGTTCTCACTGCCACACGCAGCTCAGCCTGGGCTACACAGCCAGGTGTC-AGGTGCATCTCTGCTGATCTGAGTCTGCCTG--CAGCATGGACCTCGGTCTTCCCTGAAGCATCTCCAGGGCTGGAAAATCACTCACCATGGTAAGGACCCCGCAACGCTGAGCTGATGGACGGGCTGAAGGAGGGAGGGAGACCCCAT-GGGGAGGCTCTG-AGAGGGAGGA---------GGTCACCCTCGCCTGAAAGGGGCTGACTCAGGAAGGCACCGGGTCTATTTGCTGCTGTGTCCCGGCTCTCAGTGAGATAAAGATAAATCAGGCAGACAGTGGCCTGGGGGCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542205 332 + 60714840 CCCTGCATCTCTCTTGTGTTCTCACTGC-----------------------CACAGCCAGGTGTC-AGCTGCG--TCTGCTGATGTGAGTCTGCCTG--CAGCACGGACCTGGGTCTTCCCTGAAGGATCTCCAGGGCTGGAGAATCACTGACCATGGTAATGACCCCGCAATGCTGAGCTGATGGACGGGCTGAAGGAGGGAGGGAGACCCCAT-GGGGAGGCTCTG-AGAGGGAGGAGGAGCCCACGGTCACCCTCGCCTGAAAGGGGCTGACTCCGGAAGGCACCAGGTCTATTTGCTGTTGTGTCCAGGCTCTCGGTAAGATGAAGACAGATCAGGCAGACAGTGGCCTGGGGGCAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60391390 355 + 64156825 CCCTGCATTTCTCCTCTGTGCTCACTGCCACACGCAGCTCAGCCTGGGCTGCACAGCCCGGTGTC-AGGTGCGTCTCTGCGGACCTGGGTCTGCCTG--CAGCATGGACCTGCATCTTCCCTGAAGCATCTCCAGGGCCGGAGAGACGACTGCCATGGTAAGGACCCCGCGACGCTGAGCCGATGGACGGGCTGAAGGGGGAAGGAAGACCTTG--GGGGAGGCTGTGAGAAGGAAGGGGAGGCCCCTGTTCACCCTCATCTGGAA-GGGCAGACACAGGAA-GCACCAGTTCTATTTGCTGCTATATCCCAGGTCTCAAGGAGATGAGGATAAACCAGACAGACAGTGGCTGGGGGTCAGG i rheMac3.chr19 I 315 N 0 s macFas5.chr19 55597583 356 + 59248254 CCCTGCGTTTCTCCTGTGTTCTCACTGCCACACGCAGCTCAGCCTGGGCTGCACAGCCCGGTGTC-AGGTGCGTCTCTGCTGACCTGGGTCTGCCTG--CAGCGTGGACCTGCATCTTCCCTGAAGCATCTCCAGGGCTGGAGAGACGACTGCCATGGTAAGGACCCCGCGACGCTGAGCCGATGGACGGGCTGGAGGAGGGAGGGAGACCCCAT-GGGGAGGCTCT--GAAGGGAAGAGGAGCCCACGGTCGCCCTCGCCTGAAAGGGGCTTACTCAGGAAGGCACCGGGTCTATTTGCTGCTGTGTCCCGGCCCTCAGTGAGATAAAGATAAATCAGGCAGACGGTGGCCCGGGGACGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668606 357 + 51301725 cccTGCGTTTCTCCTGTGTTCTCACTGACACTCACAGCTCAGCCTGGGCTGCACAGCCCGGTGTC-AGGTGCGTCTCTGCTGACCTGGGTCTGCCTG--CAGCACGGACCTGCATCTTCCCTGAAGCATCTCCAGGGCTGGAGAGACGATTGCCATGGTAAGGACCCCGCGACGCTGAGCCGATGGAcgggctggaggagggagggagaccccat-ggagaggctctg-agagggaagaggagCCCACGGTCGCCCTTGCCTGAAAGGGGCTGACTCAGGAAGTCACTGGGTCTATTTGCTGCTGTGTCCCGGCCCTCAGTGAGATAAAGATAAATCAGGCAGACAGTGGGCCGGGGACGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47355875 357 + 50890351 CCCTGCGTTTCTCCTGTGTTCTCACTGCCACTCACAGCTCAGCCTGGGCTGCACAACCCGGTGTC-AGGTGCGTCTCTGCTGACCTGGGTCTGCCTG--CAGCATGGACCTGCATCTTCCCTGAAGCATCTCCAGGGCTGGAGAGACGACTGCCATGGTAAGGACCCCGCGATGCTGAGCCAATGGACGGGCTGAAGGAGGGAGGGAGACCCCAT-GGGGAGGCTCTG-AGAGGGAAGAGGAGCCCATGGTCGCCCTCGCCTGAAAGGGGCTGACTCAGGAAGTCACCGGGTCTATTTGCTGCTGTGTCCCGGCCCTCAGTGAGATAAAGATAAATCAGGCAGACAGTGACCCAGGGACAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19905484 263 - 122678785 GCCTGTATTTCTCCTCTGGGCTTATTGCCACAGTGACCTCGACCTGAGCTAAGCAG--AGATGACAAGGTCTGTCTGTGCTGACATGAGCTCCACAGAATAGCAAGAACCTGAG--TTCCCTTCAGCATCT---GGGTCCTGGGAACCTCATCCATGGTGAGGACCCCAGG--GATGTGCTGA------GACTGAAG---------AGACCCCATGGGGGAGGCTCTG-GAAAGGAAGGACATGTCCTGGT-----------------GTCTGACCTGG----ACATGACATCT--------------------------------------------------CAGTAGCCTTAGGGT--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=673268.000000 s hg38.chr19_GL949753v2_alt 422527 353 + 796479 GAGACCCCATTTCTCTCTGAAATGTCTGCAGAGAGCCTGGTGCCCACCCCCATCTCAGCCCTGGGGAAATGAGAGCCAGCC-----TCCTGGGGAGGGCAGTTTCCGTTCCTGT-GGGCTGCGGATGAGATAACCCCAT-GACAAGAAAGACCCAGCCTCTGAGGGGCCACACCCTGTGTGTCTCTCTGTCCTGCCAGCACCAACGGCTCATCCATTTGCAAAGCTGAAAGGAGGCAGAGGAGACGCCATGACCGCCGCCCTCACAGCCTTGCTTTGCTTTGCTTTGGTGAGATTTGAAGAGGAGAGAGGAAACCCCA-------------------------CAGGCCCTGGTCCATCAAGAGATCCCAGGGCTTTAGGGAGCT s panTro4.chr19 59615551 347 + 63644993 GAGACCCCATTTATCTCTGAAATGTCTGCAGAGAGCCTGGTGCCCGCCCCCATCTCAGCCCTGGGGAA-TGAGAGCCAGCC-----TCCTGGGGAGGGCAGTTTCCGTTCCTGT-GGGCTGCGGATGAGATAACTCCAT-GACAAGAAGGACCCAGCCTCCGAGGGGCCACACCCTGTGTGTCTCTCTGTCCTGCCAGCACCAAGGGCTCATCCATTTGCAAACCTGAAAGGAGGCAGAGGAGACGCCATGACCGTCGCCCTCACAGCCTTGCTTTGCTTTG-----GTGAGATTTGAAGAGGAGAGAGGAAACCCCA-------------------------CAGGCCCTGGTCTATCAAGAGATCCCAGGGCTTTAGGGAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542537 346 + 60714840 GAGACACCATTTCTCTTTGAAATGTCTGCAGACAGCCTGGTGCCCGCCCCCATCTCAGCCCTGGGGAAATGAGAGCCAGGC-----TCCTGGGGAGGGCAGTTTCCATTCCTGT-GGGCTGTGGATGAGACAACCCCAC-AACAAGAAGGACCCAGCCTCCCAGCAGCCACACCCTGTATG--TCTCTGTCCTGCCAGCACCAAGGGCTCATCCATTTGCAAAGCTGAAAGGAGGCAGAGGAGACGCCATGACCGCCACCCTCACAGCCTTGCTTTGCTTTG-----GTGAGATTTGAAGAGGAGAGAGGAAACCCCA-------------------------CAGGCCCTGGTCTATCAAGAGATCCAAGGGCTTTAGGGAGCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60498678 349 + 64156825 GAGACCCCATTTCTCTCTGAAATGTCTGCAGAGAGCCTGGTGCCCGCCCCCACCTCAGCCCTGGGGAAATGAGAGCCAGGC-----TCCGGGGGAGGGCGGTTCCCCTTCCTGT-GGGCTGAGGATGAGACAACCCCCCTGATAAGAAGGACCCAGCCTCTGAGGGGCCACACCCTGTGTGTCTCTCTGTCCTGCCAGCACCGAGGTCTCATCCATCTGCAAAGTTGAAAGGAGACAGAGGAGACGCCATGACCCCCACCCTCATAGCCCTGCTCTGCTTTG-----GTGAGATTTGAAGAGGAGAGAGGAAATCCCA-------------------------CAGGCCCTGGCCTATCAAGAGATCCCAGGGCTTTAGGCAGCT i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55597939 349 + 59248254 GAGACCCCATTTCTGTCTGAAATGTCTGCAGAGAGCCTGGTGCCCGCCCCCACCTCAGCCCTGGGGAAATGAGAGCCAGGC-----TCCGGGGGAGGGCAGTTTCTGTTCCTGT-GGGCTGAGGATGAGACAACCCCCCCGATAAGAAGGACCCAGCCTCTGAGGGGCCACACCCTGTGTGTGTCTCTGTCCTGCCAGCACCGAGGTCTCATCCATCTGCAAAGTTGAAAGGAGACAGAGGAGACGCCATGACCCCCACCCTCACAGCCTTGCTCTGCTTTG-----GTGAGATTTGAAGAGGAGAGAGGAAATCCCA-------------------------CAGGCCCTGGCCTATCAAGAGATCCCAGGGCTTTAGGCAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47668963 348 + 51301725 GAGACCCCATTTCTCTCTGAAATGTCTGCAGAGAGCCTGGTGCccgcccccacctcagccctggGGAAATGAGAGCCAGGC-----TCCCGGGGAGGGCAGTTTCTGTTCCTGT-GGGCTGAGGATGAGACAACCCCCC-GATAAGAAGGACCCAGCCTCTGAGGGGCCACAccctgtgtgtctctctgtccTGCCAGCACCGAGGTCTCATCCATTTGCAAAGCTGAAAGGAGACAGAGGAGACGCCATGACGCCCACCCTCACAGCCTTGCTCTGCTTTG-----GTGAGATctgaagaggagagaggaaatcCCA-------------------------CAGGCCCTGGCCTATCAAGAGATCCCAGGGCTTTAGGCAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47356232 347 + 50890351 GAGACCCCATTTCTCTCTGAAATGTCTGCAGAGAGCCTGGTGCCCG-CCCCACCTCAGCCCTGGGGAAATGAGAGCCAGGC-----TCCGGGGGAGGGCAGTTTCTGTTCCTGT-GGGCTGAGGATGAGACACCCCCCC-GATAAGAAGGACCCAGCCTCTGAGGGGCCACACCCTGTGTGTCTCTCTGTCCTGCCAGCACCGAGGTCTCATCCATTTACAAAGCTGAAAGGAGACAGAGGAGACGCCATGACCCCCACCCTCACAGCCTTGCTCTGCTTTG-----GTGAGATTTGAAGAGGAGAGAGGAAATCCCA-------------------------CAGGCCCTGGCCTATCAAGAGATCCCAGGGCTTTAGGCAGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19905747 322 - 122678785 ------CCATTTG---CTGCATTGCCT------------------------------------TGGACACGAAAGCCAGGCTAGTATCCTGGGAACAAGA-----TGTTCCTTTAGGGCTACTGACATGACAACCCTGT-GACAGGCAGCA-CTGGCCTCCCAGTGGTCACACCCTGTGTGTCTATCTATCCTGTGGGCACTGAGGTCCC-TTAATTTGCACAGCC--ACAGCAACAAAGAAGATGCCAAGACCCCCACCCTCATGGCCTTGCTCTGTCTAG-----GTGAGATCTGAGGAGAGGAAGGGACACCCTAGTCTGGGAGGGACCAACCCCACAGCCAGGCCCTGGTCTGTC-AGATATTGCAGG--CTCAGGAGGCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45790914 1679 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=407671.000000 s hg38.chr19_GL949753v2_alt 422880 157 + 796479 CCCAGGCAGGGGAGGACTTGCTCAGGCTTCACGGGGCAAATCCCTCACTGGGAATT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCGCATGCAGGCAGGTGAGTCTGTCCCCAGCTCTCCCAGGTCCCTCCTCCTCA-----------------CCCTGGACAGTTGGGGA s panTro4.chr19 59615898 157 + 63644993 CCCAGGCAGAGGAGGACTTGCTCAGGCTTCAGGAGGCAAATCCCTCACAGGGAATT-CTCTTCCAGGGCTGAGTCAGGGCCCCAGGACCCGCGTGCAGGCAGATGAGTCTGTCCCCAGCTCTCCCAGGTCCCTCCTCCTCA-----------------CCCTGGACAGCTGGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56542883 156 + 60714840 CCCAGGCAGGGGAGGACCTGCTCAGTCTTCA-GGGGCAAATCTCTCACAGGGAACT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCTGCATGCAGGCAGGTGAGTCTGTCCCCAGCTCTCCCAGGTCCCTCCTTCTCA-----------------CTCTGGACAGCTGGGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60499027 156 + 64156825 CCCAGGCAGGGGAGGACCTGCTCAGGCCTCA-GGGGCAAATCTCTCACAGGGAACT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCATGTGCAGGCAGGTGAGTCTGTCCCCAGCTCTTCCAGGTCCCTCCTCCTCA-----------------CCCTGGACAGCTGGGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55598288 156 + 59248254 CCCAGGCAGGGGAGGACCTGCTCAGGCCTCA-GGGGCAAATCTCTCACAGGGAACT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCATGTGCAGGCAGGTGAGTCTGTCCCCAGCTCTTCCAGGTCCCTCCTCCTCA-----------------CCCTGGACAGCTGGGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47669311 156 + 51301725 CCCAGGCAGGGGAGGACCTGCTCGGGCTTCA-GGGGCAAATCTCTCACAGAGAACT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGTGAGTCTGTCCCCAGCTCTCCCaagtccctcctcctca-----------------ccctggACAGCTGGGGa i papAnu2.chr19 C 0 M 1128 s chlSab2.chr6 47356579 156 + 50890351 CCCAGGTAGGGGAGGACCTGCTCAGGCTTCG-GGGGCAAATCTCTCACAGGGAACT-CTCTTCCAGGGCTGAGTCTGGGCCCCAGGACCCACGTGCAGGCAGGTGAGTCTGTCCCCAGCTCTCCCAGGTCCCACCTCCTCA-----------------CCCTGGACAGCTGGGGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45792593 173 + 49145316 CCCAGGGAGGGAAGGAC-TGCTCAGGCTTCA-GGGGCAAATCTCTCACAGGGAACTCCTCTTCCAGGGTTGAGTCTGGGCTTCAGGACCCACGTGCAGGCAGGTGAGTCTGTCCCCAGCTGACCAAAGGTCCTCCTCCTCACTGGGGACAAGGTCCACCCCCGTGCAGCTGGGGA i calJac3.chr22 I 1679 C 0 s canFam3.chr1 19906069 137 - 122678785 CACAGAGAGGAGGGGCTCTGCTCAAGATTCA--GGGCAAACCTCTCACAGGG-ACT-CTCTTCCAGGACTGAGTGTGGGCTCCAGGACCTGAGTATAGACAGGTGATTCTGTCCCCAGGGGTCCCCA-TCTCACCTCCTCA-----------------C---------------- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=519431.000000 s hg38.chr19_GL949753v2_alt 423037 371 + 796479 TGGAGACAGCAGTTCTGGGCAG------------------------GCAGCTGGGA----TGATCTGAGGGGTGGGGAAGGTCTTGGGATCCAGGCTTTGATTTCCTTCCATGTACTCTCCCCAGGCCCACCCTCTGGGCTAAGCCAGGCT-CTGTGATCAGCTGGAGAAGCCCCATGACCATGTGGTGTCAGGGGACCCTGGAAGCCCAGGAGTACCATCTATATAAAG-AGGGAAGCACAGAGCCCTGGGACAGAACGAATCCACTGGAGACCAGGAACAAGGCCAGATACTCCATCCCATCCATGACACAGCACCATGCAGTGAGATATCAGTGTTACTATCTCAGCCCTGCGGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGT s panTro4.chr19 59616055 371 + 63644993 TGGAGACAGCAGTTCTGGGCAG------------------------GGAGCTGGGA----TGATCTGAGTGATGGGGAAGGTCTTGGGATCCAGGCTTTGATTTCCTTCCATGTACTCTCCCCAAGCCCACCCTCTGGGCTAAGCCAGGCT-CTGTGATCAGCTGGAGAAGCCCCATGACCACCTGGTGTCAGGGGACCCTGGAAGCCCAGGAGTACCATCTGTATAAAG-AGGGAAGCACAGAGCCCTGGGACAGAACGAATCCACTGGAGACCAGGAACAAGGCCAGATACTCCATCCCATCCATGACACAGCACCATGCAGGGAGATATCAGTGTTACTATCTCAGCCCTGCAGGCTGGTCAGAGCCCAGTGACCCTCTGGGGCTGGTGGTGACAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56543039 371 + 60714840 TGGAGACAGCAGTTCTGGGCAG------------------------GGAGCTGGGA----TGATCTGAGGGGTGGGGAAGGTCTTGGGATCCAGGCTTTGATTTCCTTCCAGGTACTCTCCCCAAGCCCACCCTCTGGACTGAGCCAGGCT-CTGTGATCAGCTGGAGAAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGAGGCCCAGGGTTACCATCTGTATAAAG-AGGGAAGCCCAGAGCCCTGGGACACACAGAATCCACTGGAGCCCAGGAACAAGGCCAGATTCTCCATCCCATCCATGACACAGCACCATGCAGGGAGATATCAGTGTTACTATTACAGCCCTGCAGTCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGGTGACAGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60499183 371 + 64156825 TGGAGACAGCAGATCTGGGCAG------------------------GGAGCTGGGA----TGATCTGACGGGTGGGGAAGGTCCTGGGATCCAGGCTTTGATTTCCTTCCAGGGCCCCTCCCCAAACCCACCCTCTGGGCTGAGCCTGGCT-CTGGGGTCATCCAGGGGAGCCCCGTGACCATCTGGTGTCAGGGGACCCTGGAGGCCCAGGAGTACCGTCTGCATAAAG-AGGGAAGCACAGATCCCTGGGACAGAATGAACCCACTGGAGACAAGGAACAAGGCCAGATACTCCATCCCATCCATGACAGAGCACCATGCAAGGAGATACCACTGTTACTATCTCAGCCATGCAGGCTGGTCAGAGCACAGTGACCCCCTGGAGCTGGTGGTGACAGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55598444 371 + 59248254 TGGAGACAGCAGATCTGGGCAG------------------------GGAGCTGGGA----TGATCTGACGGGTGGGGAAGGTCCTGGGATCCAGGCTTTGATTTCCTTCCAGGGCCCCTCCCCAAACCCATCCTCTGGGCTGAGCCTGGCT-CTGTGATCATCCAGGGGAGCCCCGTGACCATCTGGTGTCGGGGGACCCTGGAGGCCCAGGAGTACCGTCTGCATAAAG-AGGGAAGCACAGATCCCTGGGACAGAATGAACCCACTGGAGACAAGGAACAAGGCCAGATACTCCATCCCATCCATGACAGAGCACCATGCAAGGAGATACCACTGTTACTATCTCAGCCATGCAGGCTGGTCAGAGCACAGTGACCCCCTGGAGCTGGTGGTGACAGGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47356735 371 + 50890351 TGGAGACAGCAGATCTGGGCAG------------------------GGAGCTGGGA----TGATCTGACGGGTGGGGAAGGTCCTGGGATCCAGGCTCTGATTTCCTTCCAGGGCCCCTCCCCAAACCCGCCCTCTGGGCTGAGCCAGGCT-CTGTGATCATCCGGGGGAGCCCCGTGACCATCTGGTGTCGGGGGACCCTGGAGGCCCAGGAGTACCGTCTGGATAAAG-AGGGAAGCACAGATCCCTGGGACAGAATGAACCCACTGGAGACAAGGAACAAGGCCAGATTCTCCATCCCATCCATGACAGAGCACCATGCAAGGACATATCACTGTTGCTATCACAGCCCTGAAGGCTGGTCAGAGCACAGCGATCCCCTGGAGCTGGTGGTGACAGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45792766 400 + 49145316 GGGGAATAGCAGTTCTGGGCTGACTAATGGGCGTCTAGAGGGTCCTGTGGCTGAGAGCGGGAATCTGTTAGGTGGGAAATGACTTAGAATCTGACCGCTGATTTCCTGCCAGAGACCTTCCACAAGCCCACCCTCTGGGCTGAGCCAGGCT-CTATGATCACCCAGGAGAGTCCCGTGACCCTCAGATGTCAGGGGAGCCTGGAAACCCAGGAGTACCATCTATATCGAGAAAAAAAAAACAGCATACTGGATTACATGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCAGTCCATTGCTGGGGAACACACAGGGCGGTATCGCTGTCAGTATCACAGACGCACTCGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19906206 205 - 122678785 ---------------------------------------------TGGGATCAGGA----CCACCCACCAGGCAGGA---GGCATGGAGATCAGCAGCTGTTTTTTGTCC------------CATCCATGGTTTCAGGAACTAGACAGGTTACTGGGGTC-----------------------TTGCTCCCAGGGGACCC--------------------------ACAG-ATGAGAGGATAGGATGAGGGGACCGTGGGGGCTCAC---------------AGGTCAGAGAC---------------ACAGAG----------------------------------------------GGTGAGGGACATGAGACCC---AGAAATCAGAATGGGA--- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T e papAnu2.chr19 47669467 1128 + 51301725 M a score=451101.000000 s hg38.chr19_GL949753v2_alt 423408 196 + 796479 GAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAA-GGGGGTTGGCTCTCAGGGGTGTCT-CCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAGGTGGGAGCCCCATTTAACATGGTGCCTCCTTCTCTCCTAGGATTCTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCT s panTro4.chr19 59616426 196 + 63644993 GAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAA-GGGGGTCGGCTCTCAGGGGTGTCT-CCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAGGTGGGAGCCCCATTTAACACGGTGCCTCCTTCTCTCCTAGGATTCTACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56543410 197 + 60714840 GAGAGGACACTCAGGGGTCCCAGCCACAGGCTCTGCCCTCAGGAA-GGGGGTCGGCTCTCAGGGTCGTCTCCCCTGTCACAGCCCAGCCCTGGGGATGATGTGGGAGGTGGGAGCCCCATTTAACACAGTGCCTCCTGCTGTCCTAGGAGCCTACAGCAAACCCACCCTCTCAGCCCTGCCCAGTCCTATGGTGACCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60499554 196 + 64156825 GAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGGTCGGCTCTCAGGGGCGTCT-CCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAGGTGGGAG-CCCATTAAACACGGTGCCTCCTTCTCTCCTAGGAGTCTACAGCAAACCCACGCTCTCAGCCCCGCCCAGCCCTGTGGTGGCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55598815 196 + 59248254 GAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAAGGGGGGTCGGCTCTCAGGGGCGTCT-CCCTCTCACAACCCAGCCCTGGGGATGATGTGGGAGGTGGGAG-CCCATTAAACACGGTGCCTCCTTCTCTCCTAGGAGTCTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47670595 195 + 51301725 GAGAGGACACTCAGGGGTCCCAGCCCCAGGCTCTGCCCTCAGGAA-GGGAGTCGGCTCTCAGGGGCGTCT-CCCTCTCACAGCCCAGCCCTGGGGATGATGTGGGAGGTGGGAG-CCCATTAAACACGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCACCCtctcagccctgcccagccctgtggTGGCCT i papAnu2.chr19 M 1128 C 0 s chlSab2.chr6 47357106 195 + 50890351 GAGAGGACACTCAGGGGTCCCAGCCCCAGACTCTGTCCTCAGGAA-GGGGGTCGGCTCTCAGGGGCGTCT-CCCTCTCACAGCCCAGCCCTGGGGATGATGCGGGAGGTGGGAG-CCCATTAAACACGGTGCCTCCTTCTCTCCTAGGAGCCTACAGCAAACCCACCCTCTCAGCCCTGCCCGGCCCTGTGGTGGCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45793166 195 + 49145316 GAGA-GACACGCAGCGGTCCCAGCCCCAGGCTCTGCCCTCAGGAA-GGGGCTCTGCACTTAGGGGCATCT-CCCTTTCACAGCCCAGCCCTGGTGATGATGTGGGAGGTGTGAGCCCCACTTAACATGGTGCCTCCTTCTCTTCTAGGATATTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19906411 105 - 122678785 GAAGGGAAGTTTGGGG-----------AGAATCAGCCCTTGGAAT-CTGGGCTGG----------------TCTTCTCCCAG------------------------------------GTTTAGCACGA-----------------------------AAGCCCTACCTGCTGACCCAGCAGGGCCCTATTGTGACCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=642905.000000 s hg38.chr19_GL949753v2_alt 423604 275 + 796479 CAGGGGGGAAAGTGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGAGGTTCACATGCTATTACTATTATATGAACACCCCCCA-GGTGTGGTCCCACCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGTGAGGGAGCCACGGCCTTCTCT s panTro4.chr19 59616622 275 + 63644993 CAGGGGGGAACGTGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTGTTCTGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGACGTTCACATGCTATGGATCCTACAGGAACACCCCCCA-GGTGTGGTCCTGCCCCAGTGACCCCCTGGAGATTCTGCCCTCAGGTGAGGGAGCCACGGCCTTCTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56543607 267 + 60714840 CAGGGGGGAACGTGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTTTATTCTGATTGAGGAAGGAGAATACCAGCTCCCCCGGACCCTGGACTCACAGCGGCTCCACAGTGGGTGGTTCCAGGCCCTGTTCCCTGTGAGCCCCGTGACCCCCAGCCAC--------GTTCAGATGCTATGGATACTACAGGAACACCTCCCT-GGTGTGGTCCCGCCCCAGTGACCCCTTGGAGATTCTGGCCTCAGGTGAGGGAACCACGGCCTTCTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60499750 271 + 64156825 CAGGAGGGAACGTGACCCTCCGATGTGGCTCACAGCAGGGATATCAGCATTTTGTTCTGATTGAGGA---AGAACACAGGCTCCCCTGGACCCTAAACTCACGGCAGCTCCACAGTGGGTGGTACCAGGCCCTGTTCCCTGTGGGCCCCATGACCCCCAGCCACAGGTGGATGTTCAGATGCTATGGATACTACAGGAACACCTCCCA-GGTGTGGTCCCACCTCAGTGACCCCCTGGAGATTCTGGCCTCAGGTGAGGGA-CCACGGCCTTCTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55599011 271 + 59248254 CAGGAGGGAACGTGACCCTCCAGTGTGGCTCACAGCAGGGATATCAGCATTTTGTTCTGATTGAGGA---AGAACACAGGCTCCCCTGGACCCTAAACTCACGGCAGCTCCACAGTGGGTGGTACCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGATGTTCAGATGCTATGGATACTACAGGAACACCTCCCA-GGTGTGGTCCCACCTCAGTGACCCCCTGGAGATTCTGGCCTCAGGTGAGGGA-CCACGGCCTTCTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47670790 274 + 51301725 CAGGAGGGAACGTGACCCTCCGATGTGGCTCACAGCGGGGATATCAACATTTTGTTCTGATTGAGGAAGGAGAACACAGGCTCCCCCATACCCTGGACTCACAGCAGCTCCACAGTGGGTGGTACCAGGCCCTGTTCCCTGTGGGCCCCGTGACCACCAGCCACAGGTGGACGTTCAGATGCTATGGATACTACAGCAACACCTCCCA-GGTGTGGTCCCACCGCAGTGACCCGCTGGAGATTCTGGCCTCAGGTGAGGGA-CCACGGCCTTCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47357301 274 + 50890351 CAGGAGGGAACGTGACCCTCCGATGTGGTTCACCGAAGGGATATCAGCATTTTGTTCTGATTGAGGAAGGAGAACACAGGCTCCCCCGGACCCTGGACTCACAGCAGCTCCACAGTGGGTGGTACCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGGACGTTCAGATGCTATGGCTACTACAGGAACACCTCCCA-GGTGTGGTCCCACCGCAGTGACCCCCTGGAGATTCTGGCCTCAGGTGAGGGA-CCACGGCCTTCTCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45793361 275 + 49145316 CAGGAGGAAGCGTGACCCTCCAGTGTGGCTCACAGGTGGCATTTCATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACCGTGCCGGAGCTCCCAGCCCCGTACCCGTGGGTCGTCCTGGGCCGTCTTCTCCGTGGGCCCCGTGAGCCCCAGTCGCAGGTGGATGTACAGGTGCTATGGTTATGACTCTCACTCTCCCTA-TGTGTGGTCTTCACCCAGTGATCTCCTGGAGCTCCGGGTCCCAGGTGAGAAATTCATAGCATTGTCT i calJac3.chr22 C 0 I 236 s canFam3.chr1 102933398 273 + 122678785 CAGGAGGGCATGTGACCCTCCAGTGTGATTCATGGACAGGATTCCGCAGGTCTGTCCTGATGAAGGAAGGACAATGCCAGCACCCCTGGACCCAGGACTCCTAGCGAGCACCTAGTAGGGGGATCCAGACCCTGTTCCCTGTGGGCCCTGTGGCCCCCAGCTTCACGTGGATGTTCAGATGGTATGGTTATAAC---AACATCCCCCAGGGTGGGGTCCTTCCCCAGTGACCCCTTTAAGCTGCTGGTCTCAAATAAGGAAGTCAGATTTTTGTCC i canFam3.chr1 I 2254 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=231019.000000 s hg38.chr19_GL949753v2_alt 423879 137 + 796479 AACACAC-TTTCCGGACAGCTGACAGGTTGTGGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCACAGTGATGTGTTGATGGATGGGC---------------TGAAGGCATGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ s panTro4.chr19 59616897 137 + 63644993 AACACAC-TTTCGGGGCAGCTGACAGGTTGTGGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCACAGTGATGTGTTGATGGACGGGC---------------TGAAGGCGTGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56543874 137 + 60714840 AACACAC-TTTCGGGGCAGCTGACACGTTGTCGGGAGTTTGGCTGGTGACTGAATCTGGAAAGGACCCAGAGTGATGTGTTGATGGACGGGC---------------TGAAGGGGTGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ i ponAbe2.chr19 C 0 I 1883 s rheMac3.chr19 60500021 137 + 64156825 AATCCAC-TTTCGGGGCAGCTGACAGGCTGTGGGGAGTTTGGCTGGTGACTGACTCTGGAAAGGACCCAGAGTGATGTGTGGACGGACGGGC---------------TGCAGGCGTGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ i rheMac3.chr19 C 0 I 323 s macFas5.chr19 55599282 136 + 59248254 AATCCAC-TTTCGGGGCAGCTGACAGGCT-TGGGGAGTCTGGCTGGTGACTGACTCTGGAAAGGACCCAGAGTGATGTGTGGACGGACGGGC---------------TGCAGGCGTGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ i macFas5.chr19 C 0 I 323 s papAnu2.chr19 47671064 136 + 51301725 AATCCAC-TTTCGGGGCAGCTGACAGGCT-TGGGGAGTTTGGCTGGTGACTGACTCTGGAAAGGACCCAGAATGATGTGTGGACGGACGGGC---------------TGCAGGCGTGAGGGAGAC----CCCATGGGGAGGCTCTGACATGGGAGGA------------------------------------------------------ i papAnu2.chr19 C 0 I 323 s chlSab2.chr6 47357575 137 + 50890351 AATCCAC-TTTTGGGGCAGCTGACAGGCTGTGGGGAGTTTGGCTGGTGACTGACTCTGGAAAGGACCCAGAGTGATGTGTGGATGGACGGGC---------------TGCAGGCGTGAGGGAGAC----CCCATGGGGAGGCTCTGACGTGGGAGGA------------------------------------------------------ i chlSab2.chr6 C 0 I 323 s canFam3.chr1 102933671 211 + 122678785 CATCCATGGTTTGAGGCACCAGACAGGTTACTGGGGTCTTTGCTCCCAAGGGAGCCCCAGATGAAGGGGGGATGGTGAGGGGACCATGGAGCTCACAGATCAGAGAATCAGAGGGTGAGGGACATGAGACCTGGGGTCAGGATGGGAGAAGGGAGGTTTGGGGAGAATCAGCCCCTACAATCCACAGCTGGTCTTCTCCCAGGTGTGTCAA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45793636 236 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=870.000000 s hg38.chr19_GL949753v2_alt 424016 11 + 796479 CAGAGCTCTCC- s panTro4.chr19 59617034 11 + 63644993 CAGAGCTCTCC- i panTro4.chr19 C 0 C 0 s canFam3.chr1 102933882 12 + 122678785 GGAAGCCCTCTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56544011 1883 + 60714840 I e calJac3.chr22 45793636 236 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47357712 323 + 50890351 I e papAnu2.chr19 47671200 323 + 51301725 I e macFas5.chr19 55599418 323 + 59248254 I e rheMac3.chr19 60500158 323 + 64156825 I a score=1883.000000 s hg38.chr19_GL949753v2_alt 424027 1 + 796479 C s panTro4.chr19 59617045 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56545894 1 + 60714840 C i ponAbe2.chr19 I 1883 C 0 s rheMac3.chr19 60500481 1 + 64156825 C i rheMac3.chr19 I 323 C 0 s macFas5.chr19 55599741 1 + 59248254 C i macFas5.chr19 I 323 C 0 s papAnu2.chr19 47671523 1 + 51301725 C i papAnu2.chr19 I 323 C 0 s chlSab2.chr6 47358035 1 + 50890351 C i chlSab2.chr6 I 323 C 0 s canFam3.chr1 102933894 1 + 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr22 45793636 236 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=32039.000000 s hg38.chr19_GL949753v2_alt 424028 13 + 796479 CCTGTCCTGGC----CC s panTro4.chr19 59617046 13 + 63644993 CCTGTCCTGGC----CC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56545895 13 + 60714840 CCTGTTGTGGC----CC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60500482 13 + 64156825 CCTGTCGTGGC----CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55599742 13 + 59248254 CCTGTCGTGGC----CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47671524 13 + 51301725 CCTGTTGTGGC----CC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47358036 13 + 50890351 CCTGTCGTGGC----CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45793872 13 + 49145316 CCTGTCGTGGC----CC i calJac3.chr22 I 236 C 0 s canFam3.chr1 102933895 17 + 122678785 CCTGACCCAGCAGAGCC i canFam3.chr1 C 0 I 16489 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=2186445.000000 s hg38.chr19_GL949753v2_alt 424041 842 + 796479 CTGGAGAGACCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTCACTCTGTACAAGGAGGGGGAATGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTCCGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCGGGCTCGGCACAGG-CATTGCCGGGGGAGCCCAGGTGGTGATGGCCGGGATGAGGGGTGGGGGTCCCAAGGGAGGgagagacagacagagacaggggatg-g-ggggagggggagactcagaaaaca------gacacagagactgagGGTCCCAGGGAGAGGTCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCCTCACCCATCTGTCTTCTGTCCAGGACAGATCCCTGGCAGACCCTCCCTCTCAGTGCAGTTGTGGCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAATCACAAGAGTGGATGCACACTTTCCTTCTGACCAAGGAGGGGGCAGCCCAT---CCCCTGCTGTGTCTGAGATCAAAGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACACGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCGACCCCTACCTGCTGTCTCACCCCAGTGGCCCCGTGGAGCTCGTGGTCTCAGGTGAGG-GCGCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCT s panTro4.chr19 59617059 842 + 63644993 CTGGAGAGACCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTCACTCTGTACAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTCCGGTGCACACAAACTCTCCTCCAAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCACAGG-CATTGCCGGGGGAGCCCAGGTGGTGATGGCCGGGATGAGGGGTGGGGGTCTCAAAGGAGGGAGAAACAGAGAGAGACAGGGGATGTG-GGGGAGGGGGAGACTCAGAAAACA------GACACAGAGACTGAGGGTCCCAGAGAGGGGCCTGGGGAGGTGTCAGCTCAGAGCAA-GGTGGGGCAGCCCCTCACCCATCTGTCTTCTGTCCAGGACAGATCCCTGGCAGACCCTCCCTCTCAGTGCAGCCG-GGCCCACAGTGGTCTCAGGAGAGAATATGACCCTGCTGTGTCAGTCACAAGAGTGGATGCACACTTTCCTTCTGACCAAGGAGGGGGCAGCCCAT---CCCCTGCTGTGTCTGAGGTCAAAGTACAGAGCTCATAAGTACCAGGCTGAGTTCCCCATGAGTCCTGTGACCTCAGCCCACACGGGGACCTACAGATGCTACAGCTCACTCAGCTCCGACCCCTACCTGCTGACTCACCCCAGTGGCCCCGTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCCTGTCCTCTGTGAGCTCAAAGGCTCAGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56545908 848 + 60714840 CTGGAGAGAATCTGACCCTTCAGTGTGGCTCTGATGTCGGCTACGACAGATTCGCGCTGTACAAGGACAGGGGACGTGACTTCCTCCAGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCACAGG-CCCTGCC-AGGGAGCCCAGGTGGTGATGGCCGGGATGAGGGTTGGTGGTCCCAAGGGAGGGAGAGACAGACAGAGACAGGGGATGGA-GGGGAGGGGGAGACTCAGAGAAAACTGAGGGAGCCAGAGACTGAGGGTCCTAGAGAGGGGCCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCGTCACCCATCTGTCTTCTGTCCAGGACAGATCCCTGGCAGACCCTCCCTCTCGGTGCAGTTGTGGCCCACAGTGGTCTCAGGAGAGAAAGTGACCCTGCTGTGTCAATCACAAGAGTGGATGCACACTTTCCTTCTGACCAAAGAGGGGGCAGCCCAT---CCCCTGCTGCGTCTGAGATCAAAGTACGGAGCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCGGCCCACATGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCGACCCCTACCTGCTGTCTCACCCCAGTGGCCCCCTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60500495 831 + 64156825 CTGGAGAGAATCTGACCCTCCAGTGTCGCTCTGATGTGGACTATGACAGATTCACTCTGCACAAGGTGGGGCAACGTACCTTTCTCCAGCGCCCTGGTCAGCAGCCCCAGGCCGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCGCCTCTGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATAGCAGGTGAGGAGCCCAGCGGGTTCAATCAGGGATCCAGGCTCTGCACAGG-CCCTGCTGGGGGAGCCCAGGTGGTGATGGCCGGAATGGAGG--------------GGAAGGAGAGATAGATAGAGACAGGGGATGGG-GGGGAGGGGGACACTCAGAAAAAACA----GAGACAGAGACTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCCTCATCCATCTGTCTTCTCTCCAGGACAGATCCGTGCCAGACCCTCCCTCTCGGTGCAGTTGTGGCCCACGATGGTCTCAGGAGAGAAGGTGACCCTGCTGTGCCAATCACAAGAGTGGATGGACACTTTCCTTCTGACCAAGGAGGGGGCAGCGCAT---CCCCCGCTGCATCAGAGATCAAAGCACGAAGCTCCTATGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGAACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCATCTGCTGTCTCCCCCCAGTGACCCACTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCT i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55599755 831 + 59248254 CTGGAGAGAATCTGACCCTCCAGTGTCGCTCTGATGTGGACTATGACAGATTCACTCTGCACAAGGTGGGGCAACGTACCTTTCTCCAGCGCCCTGGTCAGCAGCCCCAGGCCGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATAGCAGGTGAGGAGCCCAGCGGGTTCAATCAGGGATCCAGGCTCTGCACAGG-CCCTGCTGGGGGAGCCCAGGTGGTGATGGCCGGAATGGAGG--------------GGAAGGAGAGATAGATAGAGACAGGGGATGGG-GGGGAGGGGGACACTCAGAAAAAACA----GAGACAGAGACTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCCTCATCCATCTGTCTTCTCTCCAGGACAGATCCGTGCCAGACCCTCCCTCTCGGTGCAGTTGTGGCCCACGATGGTCTCAGGAGAGAAGGTGACCCTGCTGTGCCAATCACAAGAGTGGATGGACACTTTCCTTCTGACCAAGGAGGGGGCAGCGCAT---CCCCCGCTGCATCAGAGATCAAAGCACGAAGCTCCTATGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGAACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCATCTGCTGTCTCCCCCCAGTGACCCACTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47671537 831 + 51301725 CTGGAGAGAATCTGACCCTCCAGTGTCGCTCTGATGTGGACTATGACAGATTCACTCTGCACAAGGCGGGGCAACGTACCTTTCTCCAGCGCCCTGGTCAGCAGTCCCAGGCCGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCATGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATAGCAGGTGAGGAGCCCAGCGGGTTCAATCAGGGATCCAGGCTCTGCACAGG-CCCTGCTGGGGGAGCCCAGGTGGTGATGGCCGGAATggagg--------------ggaaggagagatagatagagagaggggatggg-ggggagggagacactcagaaaaaaca----gagacagagactgaggGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCCTCATCCATCTGTCTTCTCTCCAGGACAGATCCGTGCCAGACCCTCCCTCTCGGTGCAGTTGTGGCCCACGGTGGTCTCAGGAGAGAAGGTGACCCTGCTGTGTCAATCACAAGAGTGGATGGACACTTTCCTTCTGACCAAGGAGGGGGCAGCGCAT---CCCCCGCTGCATCTGAGATCAAAGCACGAAGCTCCTATGTACCAGGCTGAATTCCCCATGAGTCCTGTGACGTCAGCCCACGCGGGAACCTAcaggtgctatggctcacgcAGCTCCAACCCCCATCTGCTGTCTTCCCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47358049 832 + 50890351 CTGGAGAGAATCTGACCCTCCAGTGTCGCTCTGATGTCGGCTACGACAGATTCACTCTGCACAAGGCGGGGCAACGTACCTTTCTCCAGCGCCCTGCTCAGCAGCCCCAGGCCGGGCTCTCCCAGGCCAATTTCACCCTGGGCCCTGTGAGGGGCTACCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTTCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATAGCAGGTGAGGAGCCCAGTGGGTTCAATCAGGGATCCAGGCTCTGCACAGG-CCCTGCTGGGGGAGCCCAGGTGGTGATGGCCGGGATGGAGG--------------GGAAGGAGAGATAGATAGAGACAGTGGATGTGCGGGGAGGGGGACACTCAGAGAAAACA----GAGACAGAGACTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAA-GGTGGGGCAGCCCCTCACCCATCCGTCTTCTCTCCAGGACAGATCCCTGGCAGACCCTCCCTCTCGGTGCAGTTGTGGCCCACGGTGGTGTCAGGAGAGAAGGTGACCCTGCTGTGTCAATCACAAGAGTGGATGGACACTTTCCTTCTGACCAAGGAGGGGGCAGCGCAT---CCCCCGCTGCATCTGAGATCAAAGCACGAAGCTCCTGTGTACCAGGCTGAATTCCCCATGAGTCCTGTGACGTCAGCCCACGCGGGAACCTACAGGTGCTACGGCTCATGCAGCTCCAACCCCCATCTGCTGTCTCCCCCCAGTGACCCACTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45793885 842 + 49145316 CTGGGGAGAGTCTGACCCTCCAGTGTGGCTCTGATGTCGGCTATGACAGGTTTGCTCTGTACAAGGACTGGGGACCTGACCTCCTCCAGCGCCCTGGCCGGCAGACCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGAGCCCTGTGAGCCGCTCCCACGGGGGCCCGTACAGATGCTTGGGTGCCCACAATGTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGATGTCCTGATCTCAGGTGAGGAGCCCAGCGGGTTCAGTCAGAGACCCAGGCTCTGCACAGG-CCCTGCTGGGGGAGCCCAGGTGGTGATGGCTGGGATGAGGGGTGGGGGTCCCAAGGGAGGGAGATACAGACAAAGCCAAGGGGTGGGAAGGGAGGGGGAGACTCAGAGAAAA------CAGACAGAGACTGAGGGTCCCAGAGAGAAACCT-GGGAGGTCTCAGCTCAGAACAA--GTGGGGCAGCCCCTCACCGATCCTTGTTCTTTCCAGGACAGATCCCTGACAGACCCTCCCTCTCAGTGCAGCCGGGCCCCGTGGTGGCCTCAGGAGAGAACATGACCCTGCTGTGTCAGTCACAGAGCCCGATGGACACTTTCCTTCTGACCAAGGAGGGAGCAGCTGAT---GCCCCCGTGCATCTACGATCAAAGTACCAATCTAGTAAGGACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGGCCACGCAGGGACCTACAGGTGCTACAGCTCACGCAGCTCCGACCCCTACCTGTTGTCTCACCCCAGTGACTCCCTGGAGCTCGTGGTCTCAGGTGAGG-GCCCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19906516 781 - 122678785 CTGGACAGAACCTGACTCTCCAGTGTCTCTCCGATGTCAGCTATGACAGATTCACTCTGTCCAAGAGAGGGGCACAGAACCTTCTCCAGTGTCATGGCTGACAGCCACAGGCTGGGCTTTCTAGGGCAGATATCCCCCCGGGCCCTGTGACACCCT-CCATGGAGGCTGGTACACATGCTATGGTGGACAC-ACCTCTCCTCCCAGTGGTCAGCCCTCAGTGAACCTCAGGTCATCCTGGTCACAGGTTAGGGGCC--ATGGGTGCAGGCAGAACCCCAGATTCTGCACAGGTCCCTGATAGGGGACCTTAGAAGGTGATGGCC--AACCAAGA--------------CTAGGGAG--------AGAGACAGGGGATG---GGGATGGGAGAGACTCAGAGGACA------CAGACAGA---------------------------------CTCAGGTCAGATCAAGGGCTGGATCACCCCACACCAACCCTTCCTCTTTCTAGGACAGCTCC-TCACATACCCTCCCTCTGGATGCAGCCAGGACCCTCAGTGGCCCCAGGAGAGAATGTGACCCTGCTGTGTCAGTCATGGATTTCTGTGCACACTATCCTTTTGTCCAAGGAGGGAGCAGCCGATACCCCCCATCCGTGTCTTACATTAAAGTAATGCGCTGGGCAGTACCAGGCTGAATTCTCCCCAAGTCCTGTGACTTCAGCCCAGAGAGGGACCTACAGGTGTTATGGCTCATCCAACACCTCCCCCTACCTCTTGTCACACTCCAGTGACCCCCTGGAGCTCCTAGTCTCAGGTGAGGAGCCCTGACCCTGTCCTGTCTGAGCTCCA----CCAGCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=12400.000000 s hg38.chr19_GL949753v2_alt 424883 5 + 796479 CAGGC s panTro4.chr19 59617901 5 + 63644993 CAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56546756 5 + 60714840 CAGGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60393972 5 + 64156825 CAGGC i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55600586 5 + 59248254 TAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47672368 5 + 51301725 TAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47358881 5 + 50890351 CAAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45794727 5 + 49145316 CAGGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19907297 5 - 122678785 CAGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=60434.000000 s hg38.chr19_GL949753v2_alt 424888 109 + 796479 -CCTGCCCCCAGCAGAGCTCT-GGACACTAAGGAAAGAGGGGAGTGAA-GGGAGAGGGTCCGCAGGGGAGGGTCCAGCCCATGGGAAGATGGAAATAGACAGGGACCTCCCA s panTro4.chr19 59617906 109 + 63644993 -CCTGTCCCCAGCAGAGCTCT-GGACACTAAGGAAAAAGGGGAGTGAA-GGGAGAGGGTCCACAGGGGAGGGTCCAGCCCATGGGAAGATGGAAATAGACAGGGACCTCCCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56546761 110 + 60714840 -CCTACCCCCAGCAGAACTCTGGGACAATAATGAATGAAGGGAGTGAA-GGGGGAGGGTCCGCAGGGGAGGGTCCAGCCCATGGGAGGGTGGAAACAGATGGGGACCTCCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60393977 101 + 64156825 -CCTGCCCCCGGCAGAGCTCTGGGACAATAATGAAAGAGGGGAGTGAAGGGGGGAGGGTCCACAGGGGAGGG---------TGAGAGGGTGGAAATAGAT-GCGACCTCCCA i rheMac3.chr19 C 0 C 0 s calJac3.chr22 45794732 109 + 49145316 -CCTGTGCCCAGGAGAGCTCT-GGGCTGGGATAGATGGAGGGGGGTCT-GAAGGAGGCTCAGCCAGAGGGGTCTCAGCCCTGAGAGGGAAGGAGGACAATGGGGTCCTCCCA i calJac3.chr22 C 0 I 1064 s canFam3.chr1 19907302 105 - 122678785 CCCACATCTCAGGAAAGCCTG-AGACAGTAAAAAATGTAGTG---GCA-TTGGGGGGCTCCACAGAGAAGGGTCCAGCCCAAGAGAGGATGGAACGAGCC-ACAGCCTCCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=89572.000000 s hg38.chr19_GL949753v2_alt 424997 162 + 796479 CCCCTGGCTCCCACCCCTGAAGTCTCAGTAGA-GTAAAGTGCAGGGAGGGCTGGGAGGAGACGGGGGGTGAACCTCAAAGGAGTTGAGATTAGACTGAGGGTGGA-AGACGGAGGCCCCACCTGCTCCCATCCTGGTGTCTCCACCTCAGAATCAGAGCCT---CTG s panTro4.chr19 59618015 162 + 63644993 CCCCTGGCTCCCACCCCTGAAGTCTCAGTAGA-GTAACGTGCAGGGAGGGCTGGGAGGAGATGGGGGGTGAACCTCAGAGGAGTTGAGATTAGACTGAGGGTGGA-AGACGGAGGCCCCACCCGCTCCCCTCCTGATGTCTCCACCTCAGAATCAGAGCCT---CTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56546871 162 + 60714840 CCCCTGGCTCCCACCCCTGAAGTCTCAGTAGA-GTAAAGAGCAGGGAGGGCTGGGAGGAGATGGGGGGTGAACCTCAGAGGAGTTGAGATTAGACTGAGGGTAGA-AGACAGAGGCCCCACCCGCTCCCCTCCTGATATCTCCACCTCAGAATCAGAGCCT---GTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60394078 161 + 64156825 CCCCTGGCTCCCACCCCTGAAGTCTCAGTGGA-GTGAAGAGTCGGGAGGGCTGGGAGGAGAC-GGGGGTGAACCTCAGAGGAGATGAGATTAGAATGACTGTGGA-AGACGGAGGCCCCACCCACACCCCTCCTGATGTCTCCACCTCAGAATCAGAGCCT---CTG i rheMac3.chr19 C 0 N 0 s canFam3.chr1 19907407 138 - 122678785 CCTGGGGTCCCCCATCCTGCAGTCTCAACAGAGGTAAGGAGTAGG--GGGCT-------------------ACTTGAGGGGTGGGTAGGTGAGGACAACCATGAATAGGTAGAGACCT--CCCACTCCTCTCCTGCTGCCTCTAT------ATCAGAGCCTAACCTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=39591.000000 s hg38.chr19_GL949753v2_alt 425159 147 + 796479 -TGTCCCAGTCCCCAACAGACGCCCTCCTGGAGAGAGAAGCATCCAGGCTGCCGGTGCCACCTGCATccacccccgaccccccccc-accccgcccc-ACTTCCTGCTTT--CCCCTGCAGCCTCCCCAGCACTCAGCGCACACCTGAGCCT s panTro4.chr19 59618177 148 + 63644993 -GGTCCCAGCCCCCAAAAGACGCCCTCCTGGAGACAGAAGCATCCAGGCTGCCGGTGCCACCTGCATCCACCCCTGACCCCCCCCCCACCCCGCCCC-ACTTCCTGCTTT--CCCCTGCAGCCTCCCCAGCACTCAGTGCACACCTGAGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56547033 139 + 60714840 -GGTCCCAGTCCCCAACGGACACCCTCCTGGAGAGAGAAGCATCCAGACTGCCGGTGCCACCTGCACC--------ACCACCCCC--GCCCCGCCCCTGCTTCCTGCTTT--CCCCTACAGCCTCCCCAGCACTCAGCGCACACCTGAGCCT i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 19907545 116 - 122678785 TGGGTGTAG-CCCCATAGGACACTCTCCTGGAG--AGAAGCCTCC------------CCACCTGTGT--------------------ACACTGCTCT-GCTGCCCCCTGTGCCCCCTGGGGCCCCCATGCTCCTTGGTGCCTACCTGAGCCT i canFam3.chr1 C 0 I 7251 e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=15283.000000 s hg38.chr19_GL949753v2_alt 425306 62 + 796479 CACAGGGACTTGCACGTGCTCCCGCAGCAGCTCAGGGAATGTGCACCGCTCCTCTTCTGCGC s panTro4.chr19 59618325 62 + 63644993 CACAGGGACTTGCACCTGCTCCAGCAGCAGCTCAGGGACTGTGCGCGGCTCCTCTTCTGCGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56547172 62 + 60714840 CACAGGGACCCGCACCTGCTCCCACAGCAGCTCAGGGACTGTGCACGGCTCCTCTTCTGCGC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19907661 7251 - 122678785 I e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=210476.000000 s hg38.chr19_GL949753v2_alt 425368 684 + 796479 CGTTGACATTTTTTATTTGGGTTTTTAAAATCTCATATTGGCCTTTTTGTCC--------AAGCTGGTGAAAGTAGATTTGCAGCATCACCTA-TTTTTATTCTCACCCGGTTTCGTAATAGCCCTGATCTCACGTGCTCCCTGAGGTTTTGTAAACTTCAGGTAGAAATGTGGACTTCCTTCGTTCTGGACATTTGCTATGGAGGGGGTAGGGCTTATCTTTTCAGA-AAAAGTCAAATGACTGGTACCACTCCTTGAAACCCTACAGCACTTTCCAGACCTCAGAGGGAGGGagagagaggcagagacagagac--------------------------------------------------------------------------------------------------------------agagagacagagagaga-gatattggggccgctctttcctggccggttcatcctggcctATTCTCAATCCACCAAGGCCCCGAAGCTCATctcccc-tcctcctctgcctcctcctccaccCTGTAGACAAGCGGCCATTCCTTTCTGAAGAACAGGCTGAGACCTTTCT-GGGACCTGCTCTTTCTGGAGCCTCTGTTGCTCCCTGTCTGGGTCTCCACACGCCTCCTTCCTGGCCCTTTTTCCTATTGAGGAATCAGCTTCAATGTCACCTCCAAGTGTGACCTTCACTGACGACACAGCTCAGCCCAGTCCTGCCTGCTTCTCATT-----TATGTCAAGTAATTAACCAACCTACACCATGCG-GCTGAATTCCTTCTCTCTC s panTro4.chr19 59618387 684 + 63644993 CGTTGACATTTTTTATTTGGGTTTTTTAAATCTCATATTGGCCTTTTTGTCC--------AAGCTGGTGAAAATAGATTTGCAGCATCACCTA-TGTTTATTCTCACCCGGTTTTGTAATAGCCCTGATCTCACGTGCTCCCTGAGGTTTTGTAAACCTCAGGTAGAAATGTGGACTTCCTTCGTTCTGGACATTTGCTATGGAGGGGGTAGGGCTTATCTTTTCAGA-AAAAGTCAAATGACTGGTACCACTCCTTGAAACCCTACAGCACTTTCCAGACCTCagagggagggagagagaggcagagacagagac--------------------------------------------------------------------------------------------------------------agagagacagagagaga-gaTATTGGGGCCGCCCTTTCCTGGCCGGTTCATCCTGGCCTATTCTCAATCCACCAAGGCCCCGAAGCTCAGCTGCCC-TCCTCCTCTACCTTCCCCTCCACCCCATAGACAAGCGGCAATTCCTTTCTGAAGTACAGGCTGAGACCTTTCT-GGGACCTGCTCTTTCTGGAGCATCTGTTGCTCCCTGTCTGGGTCTCCACGCGCCTCCTTCCTGGCCCTTTTTCCTATTGAGGAATCAGCTTCCATGTCACCTCCAAGTGTGACCTTCACTGACGACACAGCTCAGCCCAGTCCTGCCTGCTTCTCATT-----TATGTCAAGTAATTAACCAACCTACACCATGTG-GCTGAATTCCTTCTCTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56547234 706 + 60714840 CGTTGACATTTTTTATCTGGGTTTTTAAAATCTCGTATTGGCCTTTTTGTCC--------AAGCTGGTGAAAGTAGATTTGCAGCATCACCTATTTTTTATTCTCACCCTATTTTGTAATAGCCCTGATCTCACGTGCTCCCTGAGGTTTTGTAAACCTCGGGTAGAAATGTGGACTCCCTTCGTTCTGGACATTTGCTATGGAGGGGGTAGGGCTTATCTTTTCAGA-AAAAGTCAAATGGGTGGTATTACTCCTTGAAACCCTATAGCACTTTCCAGATCTCagagggagggagagagagacagagacggagacagaga---------------------------------------------------------------------------------------gacagagacag-agagagagagagacagagagaga-gaTATTGGGGCCGCCCTTTCCTGGCCGGTACATCCTGGCCTATTCTGAATCCACCAAGGCCCCGAAGCTCAGCTCCCC-TCCTCCTCTGCCT-CCCCTCAACCCCACAGACAAGCAGCCATTCCTTTCCGAAGAACAGGCTGAGACCTTTCT-GGGACCTGCTCTTTCTGGAGCCTCTGATGCTCCCTGTCGGGGTCTCCATGAGCCTCCTTCCTGGCTCTTTTTCCTATTGAGGAATCAGCTTCAATGTCACCTCCAAGTGTGACCTTCACTGACGACACAGCTCAGCCCAGTCCTGCCTGCTTCTCATT-----TATGTCAAGTAATTAACCAACCTACACCGTGAG-GCTGAATTCCTTCTCTCTC i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 102950401 755 + 122678785 CATGGAGATTTATAATTAGAATTCATATATACTCT--TTTATCTTTTTGTTTTTTATCTGAAAATGGGTTAAATTTGTTTGTGGGATTACCTA-AGTTTGTGCTCA-TCACTTTTATAACAATGCCGATTTTCTCTGTTCCTTAAGGAT---------------------------------------------------TGGAGGTGAGAGAGGTTGTCTTTGAAGATAAAAATCAAGTGACTTGTGTTCTTCCTTGAAATCTTATAGCAGTTTTCAGAGTTCTTCGTGAGTGACAGAGAAAAAGAgatgaggaagaggacaatgatgataataatgatggtggtggtgatgataatgatggtgaggatgatgatctggtggtggtggtgatgatggtgatggtggtgatggtgacagtggtgatggtgatgctgatgaagatgataatgGAGTT-CCCTCATCTATCCTGTCACATCTGGCCTGTCTCCATTGCAGCAGGCTCATATATCCCAGTTTCCTATTTTCCTCTGGATACTCCTGTACCC-ACAGATGTGACTTCATTCCATACTGAAAAGCATGTTTAGATCTTCCTAGGAACCTGCTCTTCCTGCAGCCTGTAATGCAGCTAGTCTGGGTCTTCATGTTACTCCCCTCAGCCTCCTTCTCCAATTCAGGAATCAACTTAAATGTCTTCTCCAAAAGCAACCTTCACT-CTGACATTGTTCAGAACAGACCTGCCTCCTTCCTACCTATGATATGTCAAATAACTAACACATTTACGATGTATGCATTGAATTCTCTTTCTCTC i canFam3.chr1 I 16489 I 40 e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=114322.000000 s hg38.chr19_GL949753v2_alt 426052 461 + 796479 TCTTCCACTC--TCTGCATATACgtgtgtgtgtgtgtgtg--------cgcgtgtgtgGTCACACCAACATCTTACGTGACATTGAAACCTAGTTATCCGtatatctatacaaataatatatattcacacataaatataGGTCTCTACCAATATATCTAAAACCATTGCTACGACTAGTAAATTTCCACTGCTGTGTTTCTATATGTTTGCTGTTTGTCTCCAGGTGAACCCACACTTCAAGAAGGCAGAGATAGTTTTTAAGGCCCACTATATATATAAAACAGATATATATTTGTGTTTGTGTTTTTCTGTGTGTGTATCACATTCTACCTGTTGCTGCCTATACGAATAATTAGCTACCTAGAGATTAAATGGACAATGAAACTCCAGGTGAAGTGGCTGAG--GGCATGAAGGGGAGGCAGCCCCAGACTTTCACCCCTTTGTGCTTCTGACATTGAGGCTCCCCTGAT s panTro4.chr19 59619071 469 + 63644993 TCTTCCACTC--TCTGCATATACgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgGTCACACAGACATCTTATGTGACATTGAAACCTAGTTATCCGTATATCTATACAAATAATATATATTCACACATAAATATAGGTCTCTACCAATATATCTAAAACCATTGCTACGACTAGTAAATTTCCACTGCGGTGTTTCTATATGTTTGCTGTTTGTCTCCAGGTGAACCCACACTTCAAGAAGGCAGAGATAGTTTTTAAGGCCCACTATATATATAAAATAGATATATATTTGTGTTTGTGTTTTTCTGTGTGTGTATCACATTCTACCTGTTGCTGCCTATATGAATAATTAGCTACCTAGAGATTAAATGGACGATGAAACTCCAGGTGAAGTGGCTGAG--GGCATGAAGGGGAGGCAGCCCCAGACTTTCACCCCTTTGTGCTTCTGACATTGAGGCTCCCCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56547940 451 + 60714840 TCTTTCACTCTGTCTGCACATACGTG----------------------TGTGTGTATGGCCACACCTACATCTTATGTGACATTAAAACCTAGTTATCCGTATATCTATACAGATAATATATATTCACACATAAATATAGATCCCTACCAATATATCTAAAACCATCCCTACAACTAGTAAATTTCCACTGCTGTGTTTCTATACGTTTGTTGTTTGTCTCCAGGTGAACCCACACTTCAAGAAGGCAGAGATAGTTTTTATGGCCCACTATATATATAAAATAGATATATATTTGTGTTTGTGTTTTTCTGTGTGTGTATCGCATTCTACCTGTTGCTGCCCATATGAATAATTAGTTACCTAGAGATTAAATGGAAGATGAAACTCCAGGTGAAGTGGCTGAGCTGGAGTGAAAGAGAGGCAGCCCCAGACTTTCACCCCTTTGTGCTTCTGACACTGAGGCTCCCCTGAT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102951156 40 + 122678785 I e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=118711.000000 s hg38.chr19_GL949753v2_alt 426513 387 + 796479 GACTAA-CCCTCATCCACGGAGCCTGGGTCCTCAGCTGGTGGATCCGTGAAACTCTCATCTCCGGGGGAGTTGGCTCATGTTCTCCTGTGTCCCAGGCTGCACAGAGAGCACA-CAGGCCTTAGTGACCTCTGTACTG-GGGACCACTTTCCTTGCAGATCCTGAGCTCTCAGGATGCAGGAAAACTCTCTCCCAGATGACTCAGGAGCAATGTTTAAATCCATAGAACACAGGAAAACTGAAATCGTTCAATGAGG-AGACTAGAGGGAATCCTGCTA--GCGGAGGAAGAGGttttttttttttttttttAGAAATTCTGTAAAAGTCACATCATGAGACATTAAGTAA--TAAAAAAAAAATTG--CAGAGCCCAGGTGAGAGGCTGGGCTCAG s panTro4.chr19 59619540 386 + 63644993 GACTAA-CCCTCATCCACGGAGCCTGGGTCCTCAGCTGGTGGATCCGTGAAACTCTCATCTCCGGGGGAATTGGCTCATGTTCTCCTGTGTCCCAGGCTGCACAGAGAGCACA-CAGGGCTCAGTGACCTCTGTACTG-GGGACCACTTTCCTTGCAGATCCTGAGCTCTCAGGATGCAGGAAAACTCTCTCCCAGATGACTCAGGAGCAATGTTTAAATCCATAGAACACAGGAAAACTGAAATCGTTCAATGAGG-AGACTGGAGGGAATCCTGCTACAGCGGAGGAAGAGGGTTTTTTTTTTTTTT---AGAAATTCTGTAAAAGTCACATCATGAGACATTAAGTAA--TAAAAAAAAAATTG--CAGAGCCCAGGTGAGAGGTTGGGCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56548391 388 + 60714840 GACTAACCCCTCATCCACGGAGCCTGGGTCCTCAGCTGGTGGATCCGCGAAACTCTCATCTCCGGGGGAATTGGCTCATGTTCTCCTGTGTCCCAGGCTGCACAGAGAGCACA-CAGGGCTCAGTGACCTCTGTACTG-GGGGCCACTTTCCTTGCAGATCCTGAACTCTCAGGATGCAGGAAAA--CTCTCCCAGATGACTCAGGAGCAACGTTTAAATCCATAGAACACAGGAAAACTGAAATTGTTCAATGAGGAAGACTGGAGGGAGTCCTGCTACAGTGGAGGAAGAGTTTTTTGTTTTTTTTTTTTAGAAATTCTGTAAAAGTCACATCATGAGACATTAAGTAA--T-AAAAAAAAATTG--CAGAGCCCAGGTGAGAGGCTGGGCTCAG i ponAbe2.chr19 C 0 C 0 s canFam3.chr1 102951196 360 + 122678785 GACCAACCCCTTATCCATGGACACTGGATCCTAAAGTGTTGAAAAATACAAGGTCTCCTATCAAAAGGAAGTAGCTTTCATGCT---------CAGAATGAACACAGAGAATAGAAGAGCCCAAATACTTCTGTACTGAGAGATGATTGTACCACTAAATTCTGAGCTA-AGGGATGCAGGAAGA----GTCCAAAGGGACTCAGAAGCAAAGTCTGAATTCACAAAACACTGGGAGACTGAAAGAATCCAATGAGA-ACA----GAGGCATATTTCTATAGCAGAGAAAGGGTTCATT---------------ACAGTCTAT-AAAGTTATATCATGAGAAATGCAGGAAGGTACAAGAACACTCAATCAGGGGACAAATTTGAGTCTCA--TCAG i canFam3.chr1 I 40 C 0 e calJac3.chr22 45794841 1064 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=-906.000000 s hg38.chr19_GL949753v2_alt 426900 2 + 796479 GT--- s panTro4.chr19 59619926 2 + 63644993 GT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56548779 2 + 60714840 GT--- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 45795905 2 + 49145316 GT--- i calJac3.chr22 I 1064 C 0 s canFam3.chr1 102951556 5 + 122678785 GACCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47358886 0 + 50890351 C e papAnu2.chr19 47672373 0 + 51301725 C e macFas5.chr19 55600591 0 + 59248254 C a score=1873495.000000 s hg38.chr19_GL949753v2_alt 426902 738 + 796479 CTCTTTTTCTC----TGTTTTGATTCTCTGGAGCAGCTGATACCCTCAGCCCATCACAAAACAAGTCTGACTCTGAGACTGGTATGTG--AGGAGATACTCTCAGTGATGGGGCTGGCACTGAGGGTTGGGTCCTGTGAAGGGGAGGTGGGTGCCCTGGGTGGAC-------------------AATCTGATCCACCCTGACCTCTGTGACCTCTTTGTCCACCATCCCCAGCCTCACACCTTCAGGATTACGCAGTGGAGAATCTCATCCACATGGGCGTGGCTGGCTTGATCCTGGTGGTCCTCGGGATTCTGTCATTTGAGGCTTGGCACAGCCAGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAGCAGAGAGGATAATGTACTTTATAGAGTCGTGAAGCCTCAGGAACAGATCTGATGATCCCAGGAGGTTCTGGAAGAAAATCTAGGGCCGATGCTATCTGGACTGTCTGCTGGTCATTTCCAGAGGAAGGAATCAATGTCCGAGTGCAGGGACATTTTCTGGGGTGATCCATGGAGAACCATTAAAATGTGATACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCTGCCTCTTTTCCCACACTTAGACATGAGGCTCCATCCCACATGGCAGCGTTGGGTCCACACCTCTGCACACCTGCATGCTCTGGT-CCATGGCGTGTCACACAGTCCTCTTCATTTCTCATTGCCACACTTCCTGGTGTACTTTACTGGGTCTTCATG s panTro4.chr19 59619928 738 + 63644993 CTCTTTTTCTC----TGTTTTGATTCTCAGGAGCAGCTGATAACCTCAGCCCATCACAAAACAAGTCTGACTCTGAGACTGATATGTG--AGGAGATGCTCTCAGTGATGGGGCTGGCACTGAGGGTTGGGTCCTGTGAAGGGGAGGTGGGTGCCCTGGGTGGAC-------------------AATCTGATCCACCCTGACCTCTGTGACCTCTTTGTCCACCATCCCCAGCCTCACACCTTCAGGATTACACAGTGGAGAATCTCATCCACATGGGTGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGTCATTTGAGGCTTGGCACAGCCAGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAGCAGAGAGGATAATGTACTTTACAGAGTCGTGAAGCCTCGGGAACAGATCTGATGATCCCAGGAGGTTCTGGAAGAAAATCTAGGGCCAATGCTATCTGGACTGTCTGCTGGTCATTTCCAGAGGAAGGAATCAATGTCCGAGTGCAGGGACATTTTCTGGGGTCATCCATGCAGAACGATTAAAATGTGATACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCCGCCTCTTTTCCCACCGTTAGACATGAGGCTGCATCCCACATGGCAGCATTGGGTCCACACTTCTGCACACCTGCGTGCTCTGGT-CCGTGGTGTGTCACAAAATCCTCTTCATTTCTCATTGCCACACTTCCTGGTGTACTTTACTGGGTCTTCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56548781 738 + 60714840 CTCTTTCTCTC----TGTTTTGATTCTCGGGAGCAGCTGATACTCTCAGCCCATCACAAAACAAGTCTGACTCTGAGACTGATGTGTG--AGGAGATGCTCTCAGTGATGGGGCTGGCACTGAGGGTTGGGTCCTGTGAAGGGGAGGTGGGTGTCCTGGGTGGAC-------------------ATTCTGATCCACCCTGACCTCTGTGACCTCTTTGTCCACCATCCGCAGCCTCACACCTTCAGGATCACACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGATCCTGGTGGTCCTTGGGATTCTGTTATTTGAGGCTTGGCACAGCCAGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAGCAGGGAGGATAATGTACTTTACAGAGTCGTGAAGCCTCGGGAACAGATCTGATGATCCCAGGAGGTTCTGGAAGAAAATCTAGGGCAGATGCTATCTGGACTGTCTGCTGGTCATTTCCAGAGGAAGGAATCAATGTCCGAGTGCAGGGATGTTTTCTGGGGTGATCCATGGAGAACCATTAAAATGTGATACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCTGCCTCTTTTCCCACCCTTAGACATGAGGCTCCATCCCACATGGCAGCGTTGGGTCCACACCTCTGCACACCTGTGTGCTCTGGT-CCATGGTGTGTCACACAGTCCTCTTCATTTCTCATTGCCACACTTCCTGGTGTACTTTACTGGGTCTTCATG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60501331 756 + 64156825 CTCTTTCCCTC----TGTTTTGGTTCTCAGGAGCTGCTGATACGCTCAGCGCATCACAAAACGAGTCTGACTCTGAGACTGATGTGTG--AGGAGATGCTCTCAGTTATGGGGCTGGCACAGAGGATTGGGTCCTGTGAAGGGGAGGTGGGTGACCTGGGTGGACATCCGGGGATCCTAGGCTGATTCTGATCCACCTTGACCTCTGTGACTTCTTTGCCCACCATCCCCAGCCTCGCACCCCCAGGATTACACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGATCCTGGTGGTCCTCGGGATTCTGTTATTTGAGGCTCGGCATAGCTGGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAACAGAGAGGATAATGGACCTTTCGGAGTCGTGAAGCCTCAGGAACAGATCTGATGATCCCAGGAGATTCTGGAAGAAAATCTAGGG-CAATGCTATCTGGACTGTCTGCTGGTCGTTTCTAGAGGAAGGAACCAATGTTTGAGTGCAGGGACATTTTCTGGGGTAATCCATGGAGAACCATTAAAATGTGACACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCTGCTTCTTTTCCCATCCTTAGACATGAGGCTACATCCCACAGGGCAGTCTTGGGTCCACACCTCTGCACACCTGCGTGCTCTGGT-CCATGGCATGTCACACAGTCCTCTTCATTTCTCATTGCGACACTTCCTGGTGTACGTTATTGGGTCTTCATG i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55600591 756 + 59248254 CTCTTTCCCTC----TGTTTTGGTTCTCAGGAGCTGCTGATACGCTCAGCCCATCACAAAACGAGTCTGACTCTGAGACTGATGTGTG--AGGAGATGCTCTCAGTTATGGGGCTGGCACAGAGGATTGGGTCCTGTGAAGGGGAGGTGGGTGACCTGGGTGGACATCCAGGGATCCTAGGCTGATTCTGATCCACCTTGACCTCTGTGACTTCTTTGCCCACCATCCCCAGCCTCGCACCCCCAGGATTACACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGATCCTGGTGGTCCTCGGGATTCTGTTATTTGAGGCTCGGCATAGCTGGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAACAGAGAGGATAATGGACCTTTCGGAGTCGTGAAGCCTCAGGAACAGATCTGATGATCCCAGGAGATTCTGGAAGAAAATCTAGGG-CAATGCTATCTGGACTGTCTGCTGGCCGTTTCTAGAGGAAGGAACCAATGTTTGAGTGCAGGGACATTTTCTGGGGTAATCCATGGAGAACCATTAAAATGTGACACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCTGCTTCTTTTCCCATCCTTAGACATGAGGCTACATCCCACAGGGCAGTCTTGGGTCCACACCTCTGCACACCTGCGTGCTCTGGT-CCATGGCATGTCACACAGTCCTCTTCATTTCTCATTGCGACACTTCCTGGTGTACTTTATTGGGTCTTCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47672373 757 + 51301725 CTCTTTCCCTC----TGTTTTGGTTCTCAGGAGCTGCTGATACGCTCAGCCCATCACAAAACGAGTCTGACTCTGAGACTGATGTGTG--AGGAGATGCTCTCAGTTATGGGGCTGGCACAGAGGATTGGGTCCTGTGAAGGGGAGGTGGGTGACCTGGGTGGACATCCAGGGATCCTAGGCTGATTCTGATCCACCTTGACCTCTGTGACTTCTTTGCCCACCATCCCCAGCCTCGCACCCCCAGGATTGCACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGTTATTTGAGGCTCGGCATAGCTGGAGAAGCTTCCCAAGATGCAGCCGGGAGGTGAACAACAGAGAGGATAATGGACCTTTCGGAGTCGTGAAGCCTCAGGAACAGATCTGATGATCCCAGGAGGTtctggaagaaaatctagggCCAATGCTATCTGGACTGTCTGCTGGTCGTTTCTAGAGGAAGGAACCAATGTTTGAGTGCAGGGACATTTTCTGGGGTAATCCATGGAGAACCATTAAAATGTGACACCTTTCTTCTCCATTAATGTTGACTTTCCTTGGTTGGATCCGCTTCTTTTCCCATCCTTAGACATGAGGCTCCCTCCCACACGGCAGTCTTGGGTCCACACCTCTGCACACCTGCGTGCTCTGGT-CCATGGCATGTCACACAGTCCTCTTCATTTCTCATTGCGACACTTCCTGGTGTACTTTATTGGGTCTTCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47358886 757 + 50890351 CTCTTTCCCTC----TGTTTTGGTTCTCAGGAGCTGCTGATACACTCAGCCCATCACAAAACGAGTCTGACTCTGAGACTGATGTGTG--AGGAGATGCTCTCAGTTATGGGGCTGGCACAGATGATTGGGTCCTGTGAAGGGGAGGTGGGTGACCTGGGGGGACATCCAGGGCTCCTAGGCTGATTCTGATCCACCTTGACCTCTGTGACTTCTTTGCCCACCATCCCCAGCCTCGCACCCCCAGGATTACACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGATCCTGGTGGTCCTCGGGATTCTGTTATTTGAGGCTTGGCATAGCTGGAGAAGCTTCCCAAGATGCAGCTGGGAGGTGAACAACAGAGAGGATAATGGACCTTTCGGAGTCGTGAAGCCTCAGGAACAGATCTGATGATCCCAGGAGATTCTGGAAGAAAATCTAGGGCCAAAGCTATCTGGACTGTCTGCTGGTCATTTCTAGAGGAAGGAACCAATGTTTGAGTGCAGGGACATTTTCTGGGGTGATCCATGGAGAACCATTAAAATGTGATACCTTTCCTCTCCATTAATGTTGACTTTCCTTGGTTGGATCCGCTTCTTTTCCCACCCTTGGACATGCGGCTACATCCCACACAACTGTCTTGGGTCCACACCTCCGCACACCTGCGTGCTCTGGT-CCATGGCATGTCACACAGTCCTCTTCATTTCTCATTGCGACACTTCCTGGTGTACTTTATTGGGTCTTCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45795907 741 + 49145316 CTCTTCTCCCT----GATTTTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCAACACAAAACAAGTCCCACTCCCAGGATGGTGAGTG--AGGAGATGCTCACGGTCATGGGGCTGGCACAGAGGGTCAGGTCCTGTCAAGGGGAGGTGGGTGCCCTGGGTGGACATCCAGaggtcctggg-tgatgctgatcctccctgacctctgtgacctctttgcccaccatccccagcctcacACCCCCAGGATTACACAGTGGGGAATCTCATCCGCATGGGCGTGGCCGGCTTGGTCCTGGTGGTCCTCGGCGCTCTGCTCTTTGAGGCTCAGCGCAGCCAGAGAAGC-CCCCAGGATGCAGCCAGGAGGTGAACAGCAGAGAGGACAGTGCGGCCTTCAGAGTGGTGGAAACCTGAGAACAGATCTGATGATCCCAGCAGGTTCTGG-AGACAATTTAGGGCTGATGCTATCTGGACTGTCTGCCAATCATTTCTAGAGGGAA------------GAGTACAGAGACATTTTCTGGGGTGATCCATGGAGGACCATGAACATATGATA-CTTCCCTCTCTATGAATGTTGACTTCCCTTCGTTGGGTCCCCTTCTTTTCCCTCTCCCAGACATGAGGCTCCATCCCACGTGGCAGCGTTGGGTCTGCACCTCTGCACACCTGCACGCTCTGGT-CCATGGCGTGTAACACAGTCTTCCTTATTCCTCATTCCCACACTCCCTGGTGAGATTTACTGAGCCTCCATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102951561 744 + 122678785 CATTTTTCCTCATGGTTTTATGATTCTCAGAAGCATCTGACAACATCAACTCATCACAAACGAAGTCAGATCCCAGCAGTGGTAACTAGCAGAAAA----CTCAGTTTTAGGGCTGGTGTGGAGGGTGAAGTCCTGTCAAGGGGAGGCAGGTACCCTGGGTGGACATCCAAGATCCCAAA--TGATTTGAGTCTGCCCTGACTTCTGTGATCTTTCTGTCC-TCATCCTTAGCCTCTGACCCCAAGGATTACACAGTGGAGAATCTCATCCGAATGGGCATGGCTACTGTGATGCTGGTGGTCCTCGGGATTCTCCTCTTTGAGTCCTGGTACAGTCAGAGAAGA-ACCCAAGATGCAGCCAGCAGGTAAACACAAGAGTGAACAACGCAACAATCAAAATCGCAGAGCCTGGGAAATACATCTCCTGTGCCCAGAAGGTTCTAGAGGAGCATGTAGGGCATGTGCTGTGTAAACTGTCAGCAGGTCATTGTGAAGTGGAGGAGTCATGGCTCATGTGCAGGGGCAAT-----GGATGCACCCTTCTG--TCATTAAACTGG---ACGCACCTTCTCTACCATTGCTGAGTTGTCTTTACTGGCTCT-TGTCTTTCCCCATTTCAGTGAGTCCAGCTTATACCCATATGGCAGATTTTAGTCCACATCTCCATACA-CTGTATGCTTTGGGACAATTTCAGGTAACACATTTTTCTCCACTTCTAATCACTACACACCTTGAGGTACACAAAGGGGTCTCCATC i canFam3.chr1 C 0 I 8481 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=137699.000000 s hg38.chr19_GL949753v2_alt 427640 56 + 796479 TCTTCAGTTCAGAGTTCCGCACCTGGTTTAGG-AACTAATTCAACGGGAGAAGATCA s panTro4.chr19 59620666 56 + 63644993 TCTTCAGTTCAGAGTTCCGCACCTGGTTTAGG-AACTAATTCAACGGGAGAAGATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549519 56 + 60714840 TCTTCAGTTCAGAGTTCCACACCTGGTTTAGG-AGCTAATTCAATGGGAGAAGATCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502087 56 + 64156825 TCTTCCATTCAGAGTTCCACACCTGGTTTAGG-AGCTAATTCAATGGGAGAAGATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601347 56 + 59248254 TCTTCCGTTCAGAGTTCCACACCTGGTTTAGG-AGCTAATTCAATGGGAGAAGATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673130 56 + 51301725 TCTTCCGTTCAGAGATCCACACCTGGTTTAGG-AGCTAATTCAATGGGAGAAGATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47359643 56 + 50890351 TCTTCCGTTCAGAGTTCCACACCTGGTTTAGG-AGCTAATTCAATGGGAGAAGATCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45796648 56 + 49145316 TCTTCAGTTCAGAGTTCCAAATGTGGCCCAGT-AAATAAATCAATGGGAGAGCATCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102960786 57 + 122678785 TCTTCGGCTCAGAACACAGATTCTGTTTTAAATAACTAAATAAATGGTAGAACACCA i canFam3.chr1 I 8481 I 846 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=2800.000000 s hg38.chr19_GL949753v2_alt 427696 1 + 796479 G s panTro4.chr19 59620722 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549575 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502143 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601403 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673186 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47359699 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45796704 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 102960843 846 + 122678785 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=100342.000000 s hg38.chr19_GL949753v2_alt 427697 46 + 796479 AGTCCGACCAGGAAAAGATAAATGCACCGTGATGCCCTCACCTCCT s panTro4.chr19 59620723 46 + 63644993 AGTCCGACCAGGAAAAGACAAATGCACCGTGATGCCCTCACCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549576 46 + 60714840 AGTCCGACCAGGAAAAGATAAGTGCACCGTGATGCCCTCACCTCCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502144 46 + 64156825 ATTCCAACCAGGAAAAGATAAATGCACCATGATGCCCTCACCTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601404 46 + 59248254 ATTCCACCCAGGAAAAGATAAATGCACCATGATGCCCTCACCTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673187 46 + 51301725 ATTCCCACCAGGAAAAGATAAATGCACCATGATGCCCTCACCTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47359700 46 + 50890351 ATTTCCACCAGGAAAAGATAAATGCACCATGATGCCTTCATCTCCT i chlSab2.chr6 C 0 I 112 s calJac3.chr22 45796705 46 + 49145316 ATTTCAACCAGGAAAAGATGAATCCACCCAGATGCCCCAACACCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102961689 46 + 122678785 AGTCCCATTTGGAACAGATATATCGAAAACCATTCTGTAAAACACT i canFam3.chr1 I 846 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=9601.000000 s hg38.chr19_GL949753v2_alt 427743 6 + 796479 GTGTGG s panTro4.chr19 59620769 6 + 63644993 ATGTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549622 6 + 60714840 GTGTGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502190 6 + 64156825 GTGTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601450 6 + 59248254 GTGTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673233 6 + 51301725 ATGTGG i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45796751 6 + 49145316 CTCCGG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102961735 6 + 122678785 ATCTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359746 112 + 50890351 I a score=117556.000000 s hg38.chr19_GL949753v2_alt 427749 56 + 796479 ACCCTATGAGCT-------------------------------------------------------------------CTTCCCTCCTTATCAGATGCTATCT-GTGTAGTTTCTCCTGAAAT s panTro4.chr19 59620775 56 + 63644993 ACCCTATGAGCT-------------------------------------------------------------------CTTCCCTCCTTATCAGATGCTATCT-GTGTAGTTTCTCCTGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549628 56 + 60714840 ACCCTATGAGCT-------------------------------------------------------------------CTTCCCTCCTTATCAGATGCTATCT-GTGTAATTTCTCCTGAAAT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502196 123 + 64156825 ACCCTACAAGCGCTTCCCTCCTTATCAGATGCTATCAGTGTAGTTTCTCACCTCCTTATCAGATGCTACCCTACGAACCCTTCCCTCCTTATCAGATGCTATCT-GTGTAGTTTCTCCTGAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601456 56 + 59248254 ACCCTACGAGCA-------------------------------------------------------------------CTTCCCTCCTTATCAGATGCTATCT-GTGTAGTTTCTCCTGAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673239 56 + 51301725 ACCCTATGAGCC-------------------------------------------------------------------CTTCCCTCCTTATCAGATGCTATCT-GTGTAGTTTCTCCTGAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47359858 56 + 50890351 ACCCTACCAGCC-------------------------------------------------------------------CTTCCCTCCTTATTAGATGCTATCT-GTGTAGTTTCTCCTGAAAT i chlSab2.chr6 I 112 C 0 s calJac3.chr22 45796757 56 + 49145316 ACCCTATGAGCC-------------------------------------------------------------------CTTCCCTCTTTCTCAGATGCTATCT-GTGTGACTTCCCCTCAGAT i calJac3.chr22 C 0 I 24954 s canFam3.chr1 102961741 57 + 122678785 ACCTCTCAAGAC-------------------------------------------------------------------ATTCCTGGTTCATCACATGATAAATCATATCAATTCTCCAGAAAT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103102765 35008 - 106955855 T a score=99285.000000 s hg38.chr19_GL949753v2_alt 427805 50 + 796479 ATCACCACCTGGAATCAACACACTGGCATTTGAAGTCACGACCCAATGGT-------- s panTro4.chr19 59620831 50 + 63644993 ATCACCACCTGGAATCATCACACTGGCATTTGAAGTCACGACCCAATGGT-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549684 50 + 60714840 ATCATCACTTGGAATCATCACACTGGCATTTTAAGTCACAACCCAATGGT-------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502319 50 + 64156825 ATCACCACTTGGAATCATCACACTGGCATTTTAAGTCACAACCCAAAGGT-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55601512 50 + 59248254 ATCACCACTTGGAATCATCACACTGGCATTTTAAGTCACAACCCAAAGGT-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673295 50 + 51301725 ATCACCACTTGGAATAATCACACTGGCATTTTAAGTCACAACCCAAAGGT-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47359914 50 + 50890351 ATCACCGCTTGGAATCATCACACTGGCATTTTAAGTCACAACCCAGTGGT-------- i chlSab2.chr6 C 0 I 365 s canFam3.chr1 102961798 58 + 122678785 ATCATCACTGGGAATGAACACACTGGTGTTTGAAGTGAGAGCCAGATGCTGAGTTTGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T a score=32029.000000 s hg38.chr19_GL949753v2_alt 427855 27 + 796479 ATGCTAATTCTGAAAAA--GACATTTTTT-- s panTro4.chr19 59620881 27 + 63644993 GTGCTAATTCTGAAAAA--GACATTTTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549734 27 + 60714840 GTGCTAATTCTGAAAAA--GACATTTTTT-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60502369 27 + 64156825 GTGCTAATTCTGAAAAA--CACATTTTTT-- i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55601562 27 + 59248254 GTGCTAATTCTGAAAAA--CACATTTTTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47673345 27 + 51301725 GTGCTAAttctgaaaaa--cacatttttt-- i papAnu2.chr19 C 0 T 85534 s canFam3.chr1 102961856 31 + 122678785 AAACAGGCTCCAAGAAATTACCACTTGTTCA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I a score=3564.000000 s hg38.chr19_GL949753v2_alt 427882 3 + 796479 Gaa s panTro4.chr19 59620908 3 + 63644993 Gaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549761 3 + 60714840 Gaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60395862 3 + 64156825 aaa i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55601589 3 + 59248254 Aga i macFas5.chr19 C 0 I 4323 s papAnu2.chr19 47587838 3 + 51301725 AAA i papAnu2.chr19 T 85534 C 0 s canFam3.chr1 102961887 3 + 122678785 AAA i canFam3.chr1 C 0 C 0 e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I a score=110748.000000 s hg38.chr19_GL949753v2_alt 427885 145 + 796479 atgctatgattagtggcatttaccaatttccttgacgtaaat-tcttttttcatggccataatcaagatgccaacgagacatccctgaatgcagggttgggaagcgttggacagACTTGTCTTCAC----TCATAAGCACCAG-------GCATCTG--- s panTro4.chr19 59620911 145 + 63644993 atgctatgattagtggcatttaccaatttccttgacataaat-tcttttttcatggccaaaatcaagatgccaaggagacatccctgaatgcagggttgggaagcgttggacagACTTGTCTTCAC----TCATAAGCACCAG-------GCATCTG--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549764 145 + 60714840 atgctatgattagtggcatttatcaatttccttgatgtaaat-ttttttttcatggccaaaatcaagatgccaatgagacatccctgaatgcagggttgggaagcgatggacagaattgtctTCAC----TTATAAGCACCAG-------GCGTCTG--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60395865 145 + 64156825 atgctattattaatggtatctaccagtttctgtgacataaag-ttttttttcatggccccaatcaaggtgccaatgagttctcactgaatgtagggttgggaagcgagggacagAGCTGTCTTCAC----TAACGAGCACCAG-------GCACCTG--- i rheMac3.chr19 C 0 N 0 s papAnu2.chr19 47587841 146 + 51301725 ATGCTATTATTAATGGTATCTACCAGTTTCTGtgacataaaatttttttttcatggcccCAGTCAAGGTGCCAATGAGTTCTCACTGAATGCAGGGTTGGGAATCAAGGGACAGAGCTGTCTTCAC----TAATGAGCACCAG-------GCACCTG--- i papAnu2.chr19 C 0 I 15 s canFam3.chr1 102961890 148 + 122678785 ATCCTGT------TGTAATTCCTGATTTTTCGTG----AAAC-TACCCCTTCATAGCC-CACTTTAGATGGCTGTGTGAATTCACTGAATGCAGAGTTAGGAGGTGATGATTGGGGTGGTCTCCCCAAGAGAATAAGAACCAACTACAGTACACCTGCTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I e macFas5.chr19 55601592 4323 + 59248254 I a score=35002.000000 s hg38.chr19_GL949753v2_alt 428030 71 + 796479 --ATAGCTCACGTATACAT-CTTATTACCTTCCATTTTAGAGTGAATAATCATTTCTACTTCAGTATTTTGGCA s panTro4.chr19 59621056 71 + 63644993 --ATAGCTCACGTATACGT-CTTATTACCTTCCATTTTAGAGTTAATAATCATTTCTACTTCAGTATTTTGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549909 71 + 60714840 --ATAGCTCACGTATACAT-CTTATTACCTTCTATTTTAGAGTTAATAATCATTTCTACTTCAATATTTTGGCA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47588002 63 + 51301725 --AGAGCTCACTCAT---------CTACCTTCTAATTCAGAGGCAATGATCACTTCTATTTCAGTGTTATGGCA i papAnu2.chr19 I 15 C 0 s canFam3.chr1 102962038 74 + 122678785 ATAACACCCACCAATGTATATTTATGTCCTTCTATTTTCAAGGTTGTGGTCACTTCTACCTCAGTGTTATGCCA i canFam3.chr1 C 0 I 9972 e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I e macFas5.chr19 55601592 4323 + 59248254 I a score=3845.000000 s hg38.chr19_GL949753v2_alt 428101 9 + 796479 CAGGTAAAa s panTro4.chr19 59621127 9 + 63644993 CAGTTAAAa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549980 9 + 60714840 CAGTTAAAa i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47588065 9 + 51301725 CAGGTGAAA i papAnu2.chr19 C 0 I 89330 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I e macFas5.chr19 55601592 4323 + 59248254 I a score=168318.000000 s hg38.chr19_GL949753v2_alt 428110 638 + 796479 gcagtcccattactgcgcgtatacccaaaggaatataaatcattctattgcaaagatacatgcacacatgtgttcatcgcagcactattcacaatagcaaagacatagaatcaacccaaatgcccatcaatgatagactggataaagaaaatgtgagacatatacaccacggaatactatgaagccataaaaagaaacaagatcatgtcctttgcagggacatggatggagctggaaaccattatcctcaggaaactaacacaggaacaggaaatcaaacgctgcatgttctcacttacaagtgggtgctgaacaatgagaatgcgtgaacacagggaggggaacaacacacactggggcctgtcggggggggggtggggtaggggtagggagagcattaggaaaaatagctaatgtatgctgggcttaatacctaggtgatgggttgacaggtgcaggaaaccaccatggcgcacattgacctatgcaataagcccacacattctgcacatgtaccccggaacttaaaataaaaataaaaaTTAAAATTAAATTATGACACCATGATCCTAGCATATCCAAAAAAGACAAAAATGCCAATATCAAATGTCGGAGAAAATAGGGCTGAATTAAAAATC s panTro4.chr19 59621136 634 + 63644993 gcaatcccattactgcatg-atacccaaaggaatataaatcattctattgcaaagatacatgcacacatgtgttcatcgcagcactattcacaataacaaagacatagaatcaacccaaatgcccatcaatgatagactggataaagaaaatgtgagacatatacaccacggaatactatgaagccataaaaagaaacaagatcatgtcctttgcagggacatggatggagctggaaaccattatcctcaggaaactaacacaggaacaggaaatcaaacgctgcatgttctcacttataagtgggtgctgaacaatgagaatgcgtgaacacagggaggggaacaacacacactggggcctgtc---gggggggtggggtaggggtagggagagcattaggaaaaatagctaatgtatgctgggcttaatacctaggtgatgggttgacaggtgcagcaaaccaccatggcacacatttacctatgcaataagcccacacattctgcacatgtaccccggaacttaaaataaaaataaaaaTTAAAATTAAATTATGACACCATGATCCTAGCATATCCAAAAAAGACAAAAATGCCAATATCAAATGTGGGAGAAAATAGGGCTGAATTAAAAATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56549989 636 + 60714840 gcaatcccattactgcgtgtatacccaaaggaatataaatcattctatcgcaaagatacatgcacgcatatgtccatcgcagcactatacacaatagcaaagacatagaatcaacccaaatgcccatcaatgatagactggataaagaaaatgtaagacatatacaccatggaatactacgaagccataaaaagaaacaagatcatgtcctttgcagggacatggatggagctggaaaccattatcctcaggaaactaacacaggaacaggaaatcaaacactgcatgttctcacttataagtgggtgctgaacaatgagaatgcatgagcacagggaggggaacaacacacactggggactgtc--ggggggggtggggtaggggtagggagagcatttggaaaaatagctaatgtatgctgggcttaatacctaggtgatgggttgacaggtgcagcaaaccaccatggagcacgtttacctatgcaataagcccgcacgttctgcacatgtaccccggaacttaaaattaaaattaaaattaaaattaaaTTATGACACCATGATCCTAGCATATCCACAAAAGACAAAAATGCCAATATCAAATGTGGGAGAAAGTAGGGCTCAATTAAAAATC i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I e papAnu2.chr19 47588074 89330 + 51301725 I e macFas5.chr19 55601592 4323 + 59248254 I a score=228391.000000 s hg38.chr19_GL949753v2_alt 428748 316 + 796479 CAATACAACgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaagtcaggagtttgagaccagcctggccaaacgtggtgaaaccctgcctctact--------aaaaatacaaaaattagccgggtgtggtggcactcgcctgtagtcctagctactagggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcaatgagctgagatcatgccactgaactccagcctgggtgacagagcgagactccgtctc-----aaaaaaaaaaaca-------------------aaaaaaaaaaaC------------------------------------ s panTro4.chr19 59621770 320 + 63644993 CAATACAACgccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttaaagtcaggagtttgagaccagcctggccaaacgtggtgaaaccctgcctctact--------aaaaatacaaaaattagccgggtgtggtggcactcgcctgtagtcctagctactagggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcaatgagctgagatcatgccactgaactccagcctgggtgacagagcgagattccgtctc-aaaaaaaaaaaaaaaaa-------------------aaaaaaaaaaaC------------------------------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56550625 320 + 60714840 CAATACAATgccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaagtcaggagtttgagaccagcctggccaaacgtggtgaaaccctgcctctact--------aaaaatacaaaaattagccgggtgtggt-ccactcgcctgtagtcctagctactagggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgagctgagatcatgccactggactccaacctaggcgacagagtaagactccgtctcaaaaaaaaaaaaaaaaaa-------------------aaaaaaaaaaaC------------------------------------ i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55605915 382 + 59248254 caactcaaggccaggtgcggtggctcatgcctgtaaccccagcactttgggaggctgaggcgggcagatcacttgaggtcaggagtttgagaccagcctgacc-aacatggtgagatcccatctctatcagaaaaagaaaaatacaaaaattagccaggtgctttggcatgcatctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagattgcaccactgcactccaccctgggcgacacagtgagactctgtcaa-aaaaaaaaaaaaaaaagaatcaactcaaaatggattaaagaaataaaggtactactggaaactatgaaactatgagaagaaaat i macFas5.chr19 I 4323 I 51 s papAnu2.chr19 47677404 381 + 51301725 CAactcaaggccaggtgcggtggctcatgcctgtaaccccagcactttgggaggctgaggcgggcagatcacttgaggtcaggagtttgagaccagcctgacc-aacatggtgaaatctcatctctattagaaaaagaaaaatacaaaaattagccaggtgctttggcatgcatctgtaatcccagctattcaggaggctgaagcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgcaccactgcactccagcctgggcgacagagtgagactctgtcaa-aaaaaaaaaaaaaagag-atcaacTCAAAAcggattaaagaaataaatgtactactggaaactatgaaactatgagaagaaaat i papAnu2.chr19 I 89330 I 52 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I a score=911873.000000 s hg38.chr19_GL949753v2_alt 429064 710 + 796479 cctcaaaagctcaggcagcaaaagcaaaaataggcaaatgagatcatagcaaactgcaaaccttctgcacaatcaaggaaacaaacagcagagtgaagagaccacctacagaatgggaaagaatatttgcaagcaagagattaatctccagaaaatacaaggagctcaaacaatgcaGAGGTTTTGAAGGATGGTGATGAGAAGGTTCTGCTACTTAC-----------------AGAAAGGAAGTTTAGGAGAAACAAAACCACAAACCTAGGTGGTGGGATGGCTTGATCTGCTTCTGTCTGTGACTCACTTAACAGTCTTAAACACATCTCCCTAAGCCTCCTTCCCCCGGTGGGATTCCTGGGTCTTGTGAGGACCTCATCGGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTCTTGTTTTCTCAGGATCTTCCCCTTCACATACAATTAACGCACCCACACGATGCTACTCTTAGAACCCTTCAAATAAATGTTTCCCGGTTCATTCACTACCAGAATCCAAGCTCAGCTTGTTCCCCAGCTTAGGACTGAGTGGTATCTTGGAGGTAGTTTCCACCATAGCCCCCTTCCTCTGCTATAAGGCTCAGTGACACACCAGAGACACCCCCTCCAGCCAGGCTCCTGGAAGGTCTGGATGAAGACTGGGATGCTGAGGCATTGCTCAGCAATGTGGCTTAACTCAAACTTCTATGTGAA s panTro4.chr19 59622090 709 + 63644993 cctcaaaagctcaggcagcaaaagcaaaaataggcaaatgagatcacagcaaactacaaaccttctgcacaatcaaggaaacaaacagcagagtgaagagaccacctacagaatgggaaagaatatttgcaagcaagagattaatctccagaaaatacaaggagctcaaacaacgcaGAGATTTTGAAGGATGGTGATGAGAAGGTTCTGCTACTTAC-----------------AGAAAGGAAGTTTAGGAGAAACAAAACCACAAACCTAGGT-GTGGGATGGCTTGATCTGCTTCTCTCTGTGACTCAGTTAACAGTCTTAAACACATCTCCCTAAGCCTCCTTCCCCCGGTGGGATTCCTGGGTCTTGTGAGGGCCTCATCGGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTGTTGTTTTCTCAGGATATTCCCCTTCACATACAATTAACACATCCACACCATGCTACTCTCAGAACCCTTCAAATAAATGTTCCCCGGTTCATTCACTACCAGAGTCCAAGCTCAGCTTGTTCCCCAGCTTAGGACTGAGTGGTATCTTGGAAGTAGTTTCCACCGTAGCCCCCTTCCTCTGCTATAAGGCTCAGTGACACACCAGAGACACCCCCTCCAGCCAGGCTCCTGGAAGGTCTGGATGAAGACTGGGATGCTGAGGCATTGCTCAGCAATGTGGCTTAACTCAAACTTCTATGTGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56550945 726 + 60714840 cctcaaaagctcaggcagcaaaagcaaaaataggcaaacgagatcacagcaaactacaaaccttctgcacaatcaaggaaacaaacagcagagtgaagagaccacctacagaatgggaaagaatatttgcaagcaagagattaatctccagaaaatacaaggagctcaaacaaTG-AGAGGTTTTGAAGGATGGTGAGGAGAAGGTTCTGCTACTTACAGAAAGGAAGAAGTCAGAGAAAGGAAGTTTAGAAGAAACAAAACCACAAACCTAGGTGGTGGGATGGCTTGATCTGCTTCTCTCTGTGACTCAGTTAACAGTCTTAAACACATCTCCCTAAGCCTCCTTCCCCCGGTGGGATTCCTGGGTCTTGTGAGGGCCTCATCCGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTGTTGTTTTCTCAGGATCTTCCCCTTCACATACAATTAACGCACCCACACCATGCTACTCTCAGAACCCTTCAAATAAATGTCCCCCGGTTCATTCACTACCAGAGTCCAAGCTCAGCTGGTTCCCCAGCTTAGGACTGAGTGGTATCTTGGAGGTAGTTTCCACCACAGCCCCCTTCCTCTGCTATAAGGCTCAGTGACACACCAGAGACATCCCCTCCAGCCAGGTTCCTGGAAGGTCTGGGTGAAGACTGGGATGCTGAGGCATTGCTCAGCAATGTGGCTTAACTCAAACTTCTATGTGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60507157 712 + 64156825 cctcaaaagcacaggcagcaaaagcaaaaataggcaaatgagatcatatcaaactacaaacctcctgcacaatcatgggaacaaacagcagagtgaagagaccacctacagaatgggaaagaatatttgcaagcgagaaatcaatctccagaatatacaaggagctcaaacaacgcaaAGGTTTTGAAGGATGGTGATGAGAAGGTTCTGCTACTTACAGAAAGGAAGAAGTTAGAGAAAGGAAATTTAGGAGAAACAAAACCATAAACCTA------------GCTTGTTCTGCTTCTCTCTGTGACTCAGTTAACAGTCTTAAACACATCTCCCTAAGCCTCCTT-CCCCGGTGGGATTCCTGGGTTGTGTGAGGGCCTCATTGGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTGTCGTTTTCTCAGGATCTTCCCCTTCACATATAATTAACGCACCTACACCATGCTACTCTCAGAACCCTTCAAATAAATGTCCCCCGGTTCATTCACCACCAGAGTCCCAGCTCAGCTGGTTCCCCAGCTTAGGACTGAGTGGTATCTTGGAGGTAGTTTCCACCACAGCCCCCTTCCTCTGCTATGAGGCTCAGTGACACACC--AGACACCCTCTCCAGCCAGGCTCCTGGAAGGTCTGGGTGAAGACTGGGACCCTGAGGCATTGCTTAGCAATGTGGCTTAACACAAACTTCTATGTAAA i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55606348 712 + 59248254 cctcaaaagcacaggcagcaaaagcaaaaataggcaaatgagatcatatcaaactacaaacctcctgcacaatcatgggaacaaacagcagagtgaagagaccacctacagaatgggaaagaatatttgcaagcgagaaatcaatctccagaatatacaaggagctcaaacaacgcaaAGGTTTTGAAGGATGGTGATGAGAAGGTTCTGCTACTTACAGAAAGGAAGAAGTTAGAGAAAGGAAATTTAGGAGAAACAAAACCATAAACCTA------------GCTTGTTCTGCTTCTCTCTGTGACTCAGTTAACAGTCTTAAACACATCTCCCTAAGCCTCCTT-CCCCGATGGGATTCCTGGGTCGTGTGAGGGCCTCATTGGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTGTCGTTTTCTCAGGATCTTCCCCTTCACATATAATTAACGCACCTACACCATGCTACTCTCAGAACCCTTCAAATAAATGTCCCCCGGTTCATTCGCCACCAGAGTCCCAGCTCAGCTGGTTCCCCAGCTTAGGACTGAGTGGTATTTTGGAGGTAGTTTCCACCACAGCCCCCTTCCTCTGCTATGAGGCTCAGTGACACACC--AGACACCCTCTCCAGCCAGGCTCCTGGAAGGTCTGGGTGAAGACTGGGACCCTGAGGCATTGCTCAGCAATGTGGCTTAACACAAACTTCTATGTAAA i macFas5.chr19 I 51 C 0 s papAnu2.chr19 47677837 712 + 51301725 cctcaaaagcacaggcagcaaaagcaaaaatatgcaaatgaaatcatatcaaaCTACAAACCTCCTGCACAATCATGGGAACAAACAGCCGAGTGAAGAGatcacctacagaatgggaaagaaTATTTGCAAGCAAGAAATCAAtctccagaatatacaaggagctcaaacaacgcAAAGGTTTTGAAGGATGGTGATGAGAAGGTTCTGCTACttacagaaaggaagaagtcagagAAAGGAAATTTAGGAGAAACAAAACCACAAACCTA------------GCTTGTTCTGCttctctctgtgactcagttaaCAGTCTTAAACACATCTCCCTAAGCCTCCTT-CCCCGGTGGGATTCCTGGGTCGTGTGAGGGCCTCATTGGTCCCTCTGGTAAACCCAGGCACAGAGTGGAGCAGCTGTTGTTTTCTCAGGATCTTCCCCTTCACATATAATTAACGCACCTACACCATGCTACTCTCAGAACCCTTCAAATAAATGTCCCCCGGTTCATCCACCACCAGAGTCCCAGCTCAGCTGGTTCCCCAGCTTAGGACTGAGTGGTATCTTGGAGGTAGTTTCCACCACAGCCCCCTTCCTCTGCTATGAGGCTCAGTGACACACC--AGACACCCTCTCCAGCCAGGCTCCTGGAAGGTCTGGATGAAGACTGGGACCCTGAGGCATTGCTCAGCAATGTGGCTTAATACAAACTTCTATGTAAA i papAnu2.chr19 I 52 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103102765 35008 - 106955855 T e chlSab2.chr6 47359964 365 + 50890351 I a score=403284.000000 s hg38.chr19_GL949753v2_alt 429774 279 + 796479 ACTTCCAACCACTTTCAGCAAGGGGTCACTTCCAGCGTCTTGGGGTGTGAGGGCACCTTGGTTGGTCCCTGCAATATCAGACCCTATAAAGATCCTACAAACATGTTGCAGACTCTTTGAAGATTCTGGCACTTTCAGACATGCTG--TTGGGAAATGGTGACACCCATAACCTTCTAGTTCCAGGACAGGGAGCCTTAGCCCAGGGCTATGTTTTCTGAGGGTCCTCAAAGTAAA----CAGTTCTATGTGCCAGGAGAACCCTAAATCTCATATGGTTCTAAG s panTro4.chr19 59622799 279 + 63644993 ACTTCCAACCACTTTCAGCAAGGGGTCACTTCCAGCGTCTTGGGGTGTGAGGGCACCTTGGTTGGTCCCTGCAATATCAGACCCTATAAAGATCCTACAAACATGTTGCAGATTCTTTGAAGATTCTGGCACTTTCAGACATGCTG--TTGGGAAATGGTGACACCCATAACCTTCTAGTTCCAGGACAGGGAGCCTTAGCCCAGGGCTATGTTTTCTGAGAGTCCTCAAAGTAAA----CAGTTCTATGTTCCAGGAGAACCCTAAATCTCATATGGTTCTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56551671 279 + 60714840 ACTTCCAACCACTTTCAGCAAGGGGTCACTTCCAGCGTCTTGGGGTGTGAAGGCACCTTGGTTGGTCCCTGCAATATCAGACCCTATAGAGATCCTACAAACATGTTGCAGATTCTTTGAAGATTCTGGCACTTTCAGACATGCTG--TTGGGAAATGGTGACACCCATAACCTTCTAGTTCCAGGACAGGGAGCCTTAGCCCAGGGCTATGTTTTCTGAGGGTCCTCAAAGTAAA----CAGTTCTATGTTCCAGGAGAACCCTAAATCTTTTACGGTTCTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103067757 271 - 106955855 ACTTCCACCCTC-CCCAACAAGTAGTCACGTCTAACCTCTTGGGTTTTGGGACAAAACCAGTTGTTTCCTTCAGTAT--GAGCCTGTGAGGTTTC-----------TTCTGATCCTCCAGAGATTCTTGTATTTTTCAACACACAGAATTGAAAAACAGTGAGGCTCATAACCTCACAGTTCCATGCCAGGGAACCTAAGTCCAGCCGTGTGTTTTCTGAAGGTTCTCAAAGCACAGACTAATTCCTATTTTCCAGGAGAACCTCACATCTCATATGGTTTCAAG i nomLeu3.chr10 T 35008 I 1341 s rheMac3.chr19 60507869 270 + 64156825 ACTTCCAACCACTTTCACCAAGGGGTTACTTCCTGCATCTTGAGGTGTGAGGGCACCTTGGTTGGTCCCTGCAATATCAGATCCTATAGAGATCCTACAAACATGTTGCAAATTCTTTGAAGATTCTAGCACTTTCAGACATGCTA--TTGGGAAATGGTGACACCCATAAGCTTCTAGTTCCAGGACAGAGAGCCTTAGCCCAGGGCTATGTTTTCTGAGGGTCCTCAAAGTAAA----CAGTTCTATGTTCCAGGAGAACCCTAGATC---------TCTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55607060 270 + 59248254 ACTTCCAATCACTTTCACCAAGGGGTTACTTCCTGCATCTTGAGGTGTGAGGGCACCTTGGTTGGTCCCTGCAATATCAGATCCTACAGAGATCCTACAAACATGTTGCAAATTCTTTGAAGATTCTAGCACTTTCAGACATGCTA--TTGAGAAATGGTGACAGCCATAAGCTTCTAGTTCCAGGACAGAGAGCCTTAGCCCAGGGCTATGTTTTCTGAGGGTCCTCAAAGTAAA----CAGTTCTATGTTCCAGGAGAACCCTAGATC---------TCTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47678549 270 + 51301725 ACTTCCAACCACTTTCACCAAGCGGTCACTTCCTGCATCTTGGGGTGTGAGGGCACCTTGGTTGGTCCCTGCAATATCAGACCCTATAGAGATCCTACAAACATGTTGCAAATTCTTTGAAGATTCTAGCACCTTCAGACAGGCTA--TTGGGAAATGGTGACACCCATAACCTTCTAGTTCCAGGACAGAGAACCTTAGCCCAGGGCTATGTTTTCTGAGGGTCCTCAAAGTAAA----CAGTTCTATGTTCCAGGAGAACCCTAGATC---------TCTAAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47359964 365 + 50890351 I a score=184374.000000 s hg38.chr19_GL949753v2_alt 430053 150 + 796479 GGCAGAAAGCCACACACGCACCGGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAAAGACAGACAGGAAAACACACACATGATGAGCCAGCTTGTAGAGCTAGAACTGAGATGGAGAGAGGCACGAGTGGGTAACAGAGTGTGCTCCC s panTro4.chr19 59623078 149 + 63644993 GGCAGAAAGCCACACACGCACCAGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAAAGACAGACAGGAAAACACACACACAATGAGTCAGGTTATAGAGCTAGAACTGAGATGGAGAGAGGCACGAGTGGGC-ACAGAGTGTGCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56551950 145 + 60714840 GGCAGAAGGCCACACACGCACTGGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAA----AGACAAGAAAACACACACACGATGAGCCAGGTTGTAGAGCTAGAACTGAGATGGAGAGAGGCATGAGTGGGC-ACAGAGTGTGCTCCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60508139 149 + 64156825 GGCAGAAAGCCACACACACGCAGGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAAAGAGAGGCAGGAAAACACTCACACGATGAGTCACGTTGCAGAGCTAGAACCGAGATGGAGAGAGGCACGAGCGGGC-ACAGAGTGTGCTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55607330 149 + 59248254 GGCAGAAAGCCACACACATGCAGGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAAAGAGAGGCAGGAAAACACTCACACGATGAGTCACGTTGCAGAGCTAGAACCGAGATGGAGAGAGGCACGAGCGGGC-ACAGAGTGTGCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47678819 149 + 51301725 GGCAGAAAGCCACACACATGCAGGCAAAAAGCAAGAGATTCAAGGAAAAGCTGAGCAAAGAGAGACAGGAAAACACTCACATGATGAGTCACGTTGCAGAGCTAGAACCGAGATGGAGAGAGGCACGAGCGGGC-ACAGAGTGTGCTCCC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103068028 1341 - 106955855 I e chlSab2.chr6 47359964 365 + 50890351 I a score=653722.000000 s hg38.chr19_GL949753v2_alt 430203 460 + 796479 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCTGAGGATAGGCTGGGTAAGGCTTGTGCTCGACAGTCAAGGACTATTTTTTTCCCCAGGCGTCTACAAGAGACCTTCCTTCTCAGCTCAACTGTGCCCTGCAGTAAGTAATGATGGAGAGAATGTGACTTTGCTCTGCAGCTCTGG-AAGCTCATTTGACCTGTGCCTTCTAACGAGGAA-GGTAAGGCCCCTGGACACTGGCTCACTGGGGTGCAGAGACAGAGTGGGGCATT-CAGGCCAACTTCTCTCTGGGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAGCTCTCTGTCGATGGCTCTGCCTGTGAGTGATCAGCCCTAGATGAC------CAC-----TGTTACTGG-GGGTAGCCCATGCCTGCTGCATGCCCTGTGAAACACTAAATCATATAGCCACGTCTGAGGGACAGCCTGCTGGAGACATGGG s panTro4.chr19 59623227 460 + 63644993 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCTGAGGTTAGGCTGAGTAAGGCTTGTGCTTGACAATCAAGGACTATTTTTTTCCCCAGGCGTCTATAAGAGACCTTCCTTCTCAGCTCAACTGTGCCCTGCAGTAAGTAATGATGGAGAGAATGTGACTTTGCTCTGCAGCTCTGG-AAGCTCATTTGACCTGTGCCTTCTAACCAGGTA-GGGGAGGCCCCTGGACACTGGCTCTCTGGGGTGCAGAGACACAGTGGGGTATT-CAGGCCAGCTTCCCTCTGGGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAGCTCTCTGTCGATGGCTCTGCCTGTGAGTGATCAGCCCTAGATGAC------CAC-----TGTTACTGG-GGGTAGCCCATGCCTGCTGCATGCCCTGTGAAACACTAAATCATATAGCCATGTCTGAGGGACAGCCTGCTGGAGACATGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56552095 461 + 60714840 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCTGAGGATAGGCTGAGCAAGGCTTGTGCTTGACAATCAAGGACTGTTTTTTTCCCCAGGCATCTACAAGAGACCTTCCTTCTCAGCTCAACTGTGCCCTGCAGTAAGTAATGATGGAGAGAATACGACTTTGCTCTGCAGCTCTGGAAAGCTCATTTGACCTGTGCCTTCTAACCAGGTA-GGGGAGGCCCCTGGACACTGGCTCACTGGGGTGCAGAGAAAGAATGGGGCATT-CAGGCCAGCTTCTCTCTGGGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAACTCTCTGTCGATGGCTCTGCCTGTGAGTGATCAGCCCTGGGTGAC------CAC-----TGTTACTGG-GGGTAGCCCATGCCTGCTGCATGCCCTGTGAAACACTAAAACATACAGCCATGTCTGAGGGACAGCCTGCTGGAGACATGGG i ponAbe2.chr19 C 0 I 135 s nomLeu3.chr10 103069369 457 - 106955855 caaaaGAGGGAGAGAGATTACTTTGTTCATACACTCAGGA---------------GTGTGTTCTAAAATCA---GCCTCTTTGTCTCTCAGGAAAATACAAAAAGCCTTCTCTCTCCACCCATGTGGACCCCATGATGAG-GCTG--GGAGAGAAGTTGACCTTTTTCTGCAGCTCTGA-AATCTCATTTGACTGGTATCATCTGTTCAGAGACGGGGTTGCTCATGGGCAGTGGCGAAGTGGAGGGTGGAGATGCAGTGGAGCATTCCAGGCCAACTTTTCTGTGGGCCCCGCAATGCCAGTCCCTGGTGGGACCTATAGATGCTATGGTTCTT--TCAATGACTCTCCCTATGAGTGGTCAGCCCCCAGTGACCCACTGCACCTTTATGTCACAGGTGAGGAGCCCATGCCTGCTGCATGCGCTGGTGCCCACTAGATCACAGAGCCACACCTGAGGGGCGTCCCACTGGGGACACAGG i nomLeu3.chr10 I 1341 C 0 s rheMac3.chr19 60508288 452 + 64156825 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCGGAGGATAGGCTGAGTAAGGCTTGTGATCGACAATCAAGGACTATTTTTTTCCCCAGCTGTCTGCAAGAGACCTTCCATCTGAGCTCAACTGTGCCCTGC----AGTAATGATGGAGAGAACATGACTTTGCTCTGCAGCTCTGG-AAGTTCATTTGACCTGTGCCTTCTA--CAGGGA-GGGGAGGCCCCTGGACCCTGGCTCACTGGGGTTCAGAGACACAGTGGAGCATT-CAGGCCAGCTTCTCTC--GGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAGCTCTCTGTCAACGGCTCAGCCTGTGAGTGATCAGCCCTGGGTAAC------CAC-----TGTTATTGA-GGGGAAGCCATGCCTGCTGCAGGTCCTGTGAAACACTAAATCATAAAGCCATGTCTGAGGGACAGCCTGCTGGAGACATGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55607479 452 + 59248254 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCGGAGGATAGGCTGAGTAAGGCTTGTGATCGACAATCAAGGACTATTTTTTTCCCCAGCTGTCTACAAGAGACCTTCCATCTGAGCTCAACTGTGCCctgc----agtaatgatggagagaacatgactttgctctgcagctctgg-aaGTTCATTTGACCTGTGCCTTCTA--CAAGGA-GGGGAGGCCCCTGGACACTGGCTCACTGGGGTTCAGAGACACAGTGGAGCATT-CAGGCCAGCTTCTCTC--GGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAGCTCTCTGTCAACGGCTCAGCCTGTGAGTGATCAGCCCTGGGTAAC------CAC-----TGTTATTGA-GGGGAAGCCATGCCTGCTGCAGGTCCTGTGAAACACTAAATCATAAAGCCATGTCTGAGGGACAGCCTGCTGGAGACATGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47678968 456 + 51301725 CAGAACAGGTGGAGAGAATGCCTTTTTCATGCCCGGAGGATAGGCTGACTAAGGCTTGTGATCGACAATCAAGgactatttttttccccagctgTCTACAAGAGAACTTCCATCTGAGCTCAACTGTGCCCTGCAGTAAGTAATGATGGAGAGAACGTGACTTTGCTCTGCAGCTCTGG-AAGCTCATTTGACCTGTGCCTTCTA--CAGGGA-GGGGAGGCCCCTGGACACTGGCTCACTGGGGTGCAGAGACACAGTGGAGCATT-TGGGCCAGTTTCTCTC--GGTCTTG--GGGCTGG----TGATGGGACCTCTAGATGCTGCAGCTCTCTGTCAACGGCTCTGCCTGTGAGTGATCAGCCCTGGGTGAC------CAC-----TGTTATTGA-GGGGAAGCCATGCCTGCTGCAGGTCCTGTGAAACACTAAATCATAAAGCCATGTCTGAGGGACAGCCTGCTGGAGACATGGG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47359964 365 + 50890351 I a score=8900.000000 s hg38.chr19_GL949753v2_alt 430663 8 + 796479 AATCTTAG s panTro4.chr19 59623687 8 + 63644993 AATCTTAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103069826 8 - 106955855 GGTATTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60508740 8 + 64156825 AATCTTAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55607931 8 + 59248254 AATCTTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47679424 8 + 51301725 AATCTTAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e ponAbe2.chr19 56552556 135 + 60714840 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47359964 365 + 50890351 I a score=337128.000000 s hg38.chr19_GL949753v2_alt 430671 249 + 796479 GGATTCCAGACAAAATGAAGCAATGAGAAACACAAAGAGGAAAAGAGAGGTTGAGTATGACAGTGGTGTCAGGGTGTAGGGTGGTAGACAGGGCAGCTCCACACTCTCCACTGCTTCCTGTCTGGAGGCCCACTTTGGGGTCCTACTTATCCAGGTGAGTGAAGGAAGAGGTCAGGACAAACACA---GGAGGTGAAGCCAGATACAGTGTGGGGAGATAAGCAGTGGCCTCAGCCTCTAGCCCTTTTCCAT s panTro4.chr19 59623695 249 + 63644993 GGATTCCAGACAAAATGAAGCAATGAGAAACACAGAGAGAAAAAGAGAGATTGAGTACGACAGGGGTGTCAGGGTGTAGGGTGGTAGACAGGGCAGCTCCACACTCTCCACTGCTTCCTGTCTGGAGGCCCACTTTGGGGTCCTACTTATCCAGATGAGTGAAGGAAGAGGTCAAGACAAACACA---GGAGGTGAAGCCAGATACAGTGTGGGGAGATAAGCAGTGGCCTCAGCCCCTCACCCTTTTCCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56552691 245 + 60714840 GGATTCCAGAC-AAATGAAGCAATGAGA---ACACAAGAGGAAAGAGGGGGTTAGTATGACAGGGGTGTCAGGGTGTAGTGTGGTAGACAGGGCAGCTCCACACTCTCCACTGCTTCTTGTCTGGAGGCCCACTTAGAGGTCCTACTTATCCAGGTGAGTGAAGGAAGAGGTCAGGACAAACACA---GGAGGTGAAGCCAGATGCAGTGTGGGGAGATAAGCGGTGGCCTCAGCCCCTCACCCTTTTCCAT i ponAbe2.chr19 I 135 C 0 s nomLeu3.chr10 103069834 215 - 106955855 GTATTCTGGATAAAATGAAACTGTGACAAATACAAACAGGAAAAAAGAAGCTGAGCATGATGGGGCTGTCAGGGTGTAGGGTGGTAAACGGGGCAGCTCCACACCCTCCGCCACCTCCTGT-------------------------------------ATGAAGAAAGAGATCAGGACAAACACAGGGGGAGGTGAGGCCAGATGTAGTTTGTGGAGATCAGAGGTTGCCTCAGCCCCTCACCCTTTTCCGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60508748 225 + 64156825 GGATTCCAGACAAATTGAAGCAATGAGAAACACAAAGAGGAAAAGAGAGGTTGAGTATGACGGGGGTGTCA-----------GGTAGACAGGGCAGCTCCACACTCTCCACTGCTTCCCGTCTGGAGGCCCACTTTGGGGTCCTACTTATCCAAGTGAGTGAAGAAAGAGGTCAGGACAAACACA----------------GATGCAGTTTGGGGAGATAAGTGGTGGCCTCAGCCCCTCGCCTTTTTCCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55607939 225 + 59248254 GGATTCCAGACAAATTGAAGCAATGAGAAACACAAAGAGGAAAAGAGAGGTTGAGTATGACGGGGGTGTCA-----------GGTAGACAGGGCAGCTCCACACTCTCCACTGCTTCCCGTCTGGAGGCCCACTTTGGGGTCCTACTTATCCAAGTGAGTGAAGAAAGAGGTCAGGACAAACACA----------------GATGCAGTTTGGGGAGATAAGTGGTGGCCTCAGCCCCTCGCCTTTTTCCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47679432 224 + 51301725 GGATTCCAGATAAATTGAAGCAATGAGaaacacaaagaggaaaagagaggttGAGTATGACAGGGTTGTCA-----------GGTAGACAGGGCAGCTCCACA-TCTCCACTGCTTCCCTTCTGGAGGCCCACTTTGGGGTCCTGCTTATCCAAGTGAGTGAAGAAAGAGGTCAGGACAAACACA----------------GATGCAGTTTGGGGAGATAAGCGGTGGCCTCAGCCCCTCGCCCTTTTCCAT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47359964 365 + 50890351 I a score=555125.000000 s hg38.chr19_GL949753v2_alt 430920 272 + 796479 CTTCCAGAAGCCCCTCCTGAGCTCTCATCACAGACAGATTTCCC-ATTTGGAAACCCAGATATTTATCATGCCGGGGGGGGGAGGCAATGTCTCTTGATTATGGGGACTTTCCATCACCAGGCACCTGCTAGTCCTCTCTATACCTTCCCT-T--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAGACCCCAGGACCCCTATCAGTCACTAGGGAGATGACAGAGTAGAGGAAGTCAGGGGACCAACCCTCCACAGAGAATGGTCCTA s panTro4.chr19 59623944 270 + 63644993 CTTCCAGAAGCCCCTCCTGAGCTCTCACCACAGACAGATTTCCC-ATTTGGAAACCCAGATATTTATCATGCC--AGGGGGGAGGCAATGTCTCTTGATTATGGGCACTTTCCACCACCAGGCACCTGCTAGTCCTCTCTATACCTTCCCT-T--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAGACCCCAGGACCCCTATCAGTCACTAGGGAGATGACAGAGTAGAGGAAGGCAGGGGACCAACCCTCCACAGAGAATGGTCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56552936 267 + 60714840 CTTCCGGAAGCCCCTCCTGAGCTCTCACCACAGAGAGATTTCCC-ATTTGGAAACCCAGATATTTATCATCCC---GGGGGGAGGCAATG--TCTTGATTATAGGCACTTTCTATCACTAGGCACCTGCTAGTCCTCTCTATACCTTCCCT-T--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAGACCCCAGGACCCCTATCAGTCACTAGGAAGATGACAGAGTAGAGGAAGGCAGGGGACCAACCCTCCACAGAGAATGGTCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103070049 249 - 106955855 TTCTCCAAAGCCCCTCCTGACCCCTCACCTCAGGGAGATCTCCCTGCCAGGGAATGTGGAGATTTATCATCCT---GATGGAAGACAATGTCTGTTGAT--------------ATCACCATGCATCTCCTTATC--------ACCTTCCCA-TCCCAGGGAAGGAATTGTCCCCCA-GAGATTCCAGGGAAGAGACCCCAGGACCCCCGTTGGTCTTTAGGTGGATGACAGAGTAGGGGGTGTGCAGGGACCAACCCTCCAAAGAAAATGGTGCTA i nomLeu3.chr10 C 0 T 11654 s rheMac3.chr19 60508973 269 + 64156825 CTTCCGGAAGCCCCTCCTGAGTTCTCACCAAAGAGAGATTTCCC-ATTTGGAAACTCGGATATTTATTATCCC---AGGCGGAGGCAATGTCTCTTGATTATGGGCACTTTCCATCACCAGGCACCTGCTAGTCCTCTCTATACCTTCCCTCT--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAC-CCCCAGGACCCCTATCAGTCACTAGGGAGATGACAGAGTAGAGGAAGGCAGGGGACCAACACTCCATAGAGAATGGTCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55608164 269 + 59248254 CTTCCGGAAGCCCCTCCTGAGTTCTCACCAAAGAGAGATTTCCC-ATTTGGAAACTCGGATATTTATTATCCC---AGGCGGAGGCAATGTCTCTTGATTATGGGCACTTTCCATCACCAGGCACCTGCTAGTCCTCTCTATACCTTCCCTCT--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAC-CCCCAGGACCCCTATCAGTCACTAGGGAGATGACAGAGTAGAGGAAGGCAGGGGACCAACCCTCCATAGAGAATGGTCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47679656 268 + 51301725 CTTCCAGAAGCCCCTCCTGAGCTCTCACCAAAGAGAGATTTCCC-ATTTGGAAACTCGGATATTTATTATCCC---GGGCGGAGGCAATGTCTCTTGATTATGAGCACTTTCCATCACCAGGCA-CTGCTAGTCCTCTCTATACCTTCCCTCT--CAGGAAAGGAATTGTCCCTCATGGGATTCCAGGGAAGAC-CCCCAGGACCCCTATCAGTCACTAGGGAGATGACAGAATAGAGAAAGGCAGGGGACCAACCCTCCATAGAGAATGGTCCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47360329 270 + 50890351 CTTCCGGAAGCCCCTCCTGAGCTCTCACCACAGAGAGATTTCCC-ATTTGGAAACTCGGATATTTATTATCCT---GGGCGGAGGCAATGTCTCTTGATTATGGGCACTTTCCATCACCAGGCACCTGCTAGTCCTCTCCATACCTTCCCTCT--CAGGAAAGGAATTGTCCCTCATGGGATTCTAGGGAAGACACCCCAGGACCCCTATCAGTCACTAGCGAGATGACAGAGTAGAGGAAGGCAGGGGACCAACCCTCCATAGAGAATAGTCCTA i chlSab2.chr6 I 365 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=322328.000000 s hg38.chr19_GL949753v2_alt 431192 157 + 796479 CTTCAGTGGGGTGAGGGA-AACTCTCACTCATCCATTTGCTGTCCTGTTACCTCGGAA-CCCTAAGAGAACTTGTTAGTCACACACAGAATCTACCCCTGAATGTGGTGTGCAAAGTGGGGCTCTTAGCCTCCAGTGTGAAGTCCCTGGGAAGATGGAA s panTro4.chr19 59624214 157 + 63644993 CTTCAGTGGGGTGAGGGA-AACTCTCACTCACCCATTTGCTGTCCTGTTACCTTGGAA-CCCTAAGAGAACCTGTTAGTTACCCACAGAATCTACCCCTGAATGTGGTGTGCAAAGTGGGGCTCTTAGCCTCCAGTGTGAAGTCCCTGGggagacggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56553203 157 + 60714840 CTTCGGTGGGGCGAGGGA-AACTCTCACTCACCCATTTGCTGTCCTGTTACCTCGGAA-CCCTAAGAGAACTTGTTAATCACCCACAGAATCCACCCCTGAATGTGGTGTGCAAAGTGGGGCTCTTAGCCTCCAGTGTGAAGTCCCGGGGGAGATGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103058644 155 - 106955855 CTTCAGTGTGGTGAGGAACGACTCTTGTACACCCATTCTCTGTCTTTTTTCCTAGGAATTCCTGAGAGTACTTGCCTGACAACCACGGAATCAACCCCTGAAACCGGTGAGCAAA---GAATTCTTCACCTAGTTTGTGAA-TCCCTGGGGAGACAGAA i nomLeu3.chr10 T 11654 N 0 s rheMac3.chr19 60509242 157 + 64156825 CTTCGGTGGGACAAGGGA-GGCTCTCCCTCACCCATTTGCTGTCCTGTTACCTTGGAA-CCCTAGGAGAACTTGTTAGTCACCCACAGAATCCACCCTTGAATGTGGTGTACAAAGTGGTGCTGTTAGCCTCCAGTGTGAAGTCCCTGGGGAGATggaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55608433 157 + 59248254 CTTCGGTGGGACAAGGGA-GGCTCTCCCTCACCCATTTGCTGTCCTGTTACCTTGGAA-CCCTAGGAGAACTTGTTAGTCACCCACAGAATCCACCCTTGAATGTGGTGTACAAAGTGGTGCTGTTAGCCTCCAGTGTGAAGTCCCTGGGGAGATggaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47679924 157 + 51301725 CTTCAGTGGGACGAGGGA-GGCTCTCCCTCACCCATGTGCTGTCCTGTTACCTTGGAA-CCCTAGGAGAACTTGTTAGTCACCCACAGAATCCACCCCTGAATGTGGTGTGCAAAGTGGTGCTCTTAGCCTCCAGTGTGAAGTCCCTGGGGAGATGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47360599 157 + 50890351 CTTCGGTGGGGCGAGGGA-GGCTCTCCCTCACCCATGTGCTGTCCTGTCACCTTGGAA-CCCTAGGAGAACTTGTTAGTCACCCACAGAATCCACCCCTGAATGTGGTGTGCAAAGTGGTGCTCTTAGCCTCcagtgtgaagtccctggggagacggaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=1578287.000000 s hg38.chr19_GL949753v2_alt 431349 904 + 796479 TGTCcctgtgtgagtgaaggctgtgccaccgcccagctatgtggccttgggctaggcaacccctcccaggtcccca-gttccccatc---------------------tgcaTCGGAGACTGTGGCCAGTGCGGGAATCCACAAGGCCCTTCAGCCTCCAAAGCTCTGGGACAGAGGCCTCGTCCACAGGGAGGAAGGGGTCAGAGTGACCTGAGTCCCTACTCAGGAGCGAGTCTAATCCACTCTCCATCGGGGCCTGTGGGGAAGGGAAGATGAAGAAACGGAGCCTGCACCTGGCTATGTGGGCGCAGTAGATTAA-GGGGAGGATGagggttcctgagagtgtgtcatgtggcagagaccctgcagcacactcaggaagggctctggaaggatccaaggaaattttccaagaagagggcagagtaagtgacagagaccctCAACCATGGATTTCACTGAGGTGCCCATGATGACATAGGGAGAACGGGGGTGTCTGGGCAGGAAGAATATCGTCAGGGTGAAATGAATGGTGATGAGCTTCGTGTCAGAGCTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAAAGGTCTCTGATCCTACCCCAGCCCCCAGCCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCTGGTCTTCCTGGCTCGATTCACAACACTGGCTGGGGACTGGGAACCCATGGGGAGCCACAGGTGGAAAGGGAGGAGCCTCAGTGAACCCAGCAGGAACAAACATAGGGTCTGACATGATGGAACTCACTTCCTGGAGGCCAAGAAAGACA-CTTGCGGGACAAAAGGGAAAGAGCGGTGGCTTGCTTAGTTCCATTCACTGACAACCCACAGGAGATGTCCAGTCCTTTTTTGATTTAttattttattttattata s panTro4.chr19 59624371 895 + 63644993 tgtccctgtgtgagtgaaggctgtgccacctcccagctatgtgaccttgggctaggcaacccctcccaggtcccca-gttccccacc---------------------tgcaTCTGAGACTGTGATCAGTGCAGGAATCCACAAGGCCCTTCAGCCTCCAATGCTCTGGGACAGAGGCCTCATCCACGGGGAGGAAGGGGTCAGAGTGACCTGAGTCCCTACTCAGGAGCGAGTCTAATCCACTCTCCATCAGGGCCTGTGGGGAAGGGAAGATGAAGAAATAGAGCCTGCACCTGGCTATGTGGGCGCAGTAGGTGAAGGGGGAGGATGagggctcctgagactgtgtcatgtggcagagaccctgcagcacactcaggaagggctctggaaggatccaaggaaattttccaagaagagggcagagtaagtgacagagaccctCAACCATGGATTTCACTGAGGTGCCCATGATGACATAGGGAGAATGGGGGTGTCTGGGCAGGAAGAATATCGTCAGGGTGAAATGAATGGTGATGAGCTTCATGTCAGAGCTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAAAGGTCTCTGATCCTACCCTAGCCCCCAGCCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCAGGTCTTCCTGGCTCGATTCACACCACCAGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAAGGGAGGAGGCTCAGTGAACCCAGCAGGAACAAACATAGGGTCTGACATGATGGAACTCAATTCCTGGAGGCTAAGAAAGACA-CTTGTAGGACAAACGGGAAAGGGCAGTGGCTTGCTTAGTTCCATTCACTGACAACCCACAGGAGATGTCCAGTCCTCTttttatttattattt----------ta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56553360 889 + 60714840 TGTCcctgtgtgagtgaaggctgtgccacctcccagctatgtgaccctgggctaggcaacccctcccaggtcccca-gttccccatc---------------------cgcaTCTGAGACTGTGGTCGGCACAGGAATCCACAAGGGCGTTCAGCCTCCGATGCTCTGGGAAAGAGGCCTCGTCCACAGGGAGGAAGGGGTGAGAGTGACCTGAGTCCCTACTCAGGAGTGAGTCTAATCCACTCTCCATCAGGGCCTATGGGGAAGGGAAGATGAAGAAACGGAGCCTGCACCTGGCTGTGTGAGCGCAGTAGATGAAGGGGGAGGATGAGGGCTCCTGAGAGTGTGTCGTGTGGCAGAGACCCTGCAGCACACTCAGGAAGGGCTCTGGAAGGATCCAAGGAAATTTTCCAAGAAGAGGGCAGAGTAAGTGACAGAGACTCTCAACCATGGATTTCACTGAGGTGCCCATGATCAT-TAGGGAGAATGGGGATGTCTGGGCAGGAAGAATGTCGTCAGGGTGAAATGAATGGTGATGAGCTTCATGTCAGAGCTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAAAGGTCTCTGATCCTACCCTAGCCCCCCACCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCAGGTCTTTCTGGCTCAATTGACAATGCCGGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAAGGGACGAGGCTCAGTGAACCCAGCAGGAACAAACATAGGGTCTGACACGATGGAACTCACTTCCTGGAGGCCAAGAAAGACA-CTTGTAGGATGAAAAGGAAAGGGCGGTGGCTTGCTTTGTTCCATTCACTGACAACCCACAGGAGATGTCCAGTCTTCTTTCTATTTAT---------------TC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60509399 922 + 64156825 ggcccccgtgtgagtgaaggctgtgccacct-ccagctgtgggaccttgggctaggcagcccctcccgagttcctaggttccccatccgcaTCTGAGACTGTGGTCAGTGCATCTGAGACTGTGGTCAGTGCGGGAATCCGCAAGACCCTTCAGCCTCCAATGCTCTGGGACGGAGGCCCCGTCCACAGGGAGGAAGGGGTCAGAGTGACCTGAGCCCCTACTCAGGAGCGAGTCTAATCCACTCTCCATCAGGGCCTGTGGGGAAGGGAAGATGAAGAAACGGAGCCTGCACCTGGCTGTGTGGGCGCAGTAGGTGAG-GGGGAGGATGagggctcctgagagtgtgccgtgtggcagagaccctgcagcacactcaggaagggctctggaaggatccaaggaacgtttccaagaagagggaagagtaagtgacagagaccctCAACTGTGGATTTCACTGAGGTGCCCATGATGATATAGGGAGAATGGGGGTGTCTGGGCAGGAAGAATATCGTCGGGGTGAAACGGGTGGTGATGGGCTCCGTGTCAGAACTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAAAGGTCTCTGATCCTACCCCAGCCCCCAGCCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCTGGTCTTCCTGGCTCTATTCACAATGCTGGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAATGGAGGAGACTCAATGAACCCAGCAGCAATAAACATGGGGTCTG--ACAATGGAACTCACTTCCTGAA-GCCAAGAAAGGCA-CTTGTAGGACAAAAGGGAAAGGGCGGTGGCTTGCTTGGTTCTGTTCACTGACAACCCACAGGAGATGTCCAGTCCTCTttttatttattattttattttatttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55608590 922 + 59248254 ggcccccgtgtgagtgaaggctgtgccacct-ccagctgtgggaccttgggctaggcagcccctcccgagttcctaggttccccatcCACATCTGAGACTGTGGTCAGTGCATCTGAGACTGTGGTCAGTGCGGGAATCCACAAGACCCTTCAGCCTCCAATGCTCTGGGACGGAGGCCTCGTCCACAGGGAGGAAGGGGTCAGAGTGACCTGAGCTCCTACTCAGAAGCAAGTCTAATCCACTTTCCATCAGGGCCTGTGGGGAAGGGAAGATGAAGAAACGGAGCCTGCACCTGGCTGTGTGGGCGCAGTAGGTGAG-GGGGAGGATGagggctcctgagactgtgccgtgtggcagagaccctgcagcacactcagggagggctctggaaggatccaaggaaagtttccaagaagagggaagagtaagtgacagagaccctCAACCGTGGATTTCACTGAGGTGCCCATGATGATATAGGGAGAATGGGGGTGTCTGGGCAGGAAGAATATCGTCGGGGTGAAACGGGTGGTGATGGGCTCCGTGTCAGAACTCCTGTGGAGGGAGGGGCCTGGCCCACACGAAAAGGTCTCTGATCCTACCCCAGCCCCCAGCCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCTGGTCTTCCTGGCTCTATTCACAATGCTGGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAATGGAGGAGACTCGATGAACCCAGCAGCAATAAACATGGGGTCTG--ACAATGGAACTCACTTCCTGAA-GCCAAGAAAGGCA-CTTGTAGGACAAAAGGGAAAGGGCGGTGGCTTGCTTGGTTCTGTTCACTGACAACCCACAGGAGATGTCCAGTCCTCTTTTTATTTAttattttattttatttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47680081 901 + 51301725 GGCCCCCATGTGAGTGAGGGCTGTGCCAcct-ctagctgtgtgaccttgggctaggcAGCCCCTCCCAAGTCCCCAGGGTCCCCATC---------------------TGCATCTGAGACTGTGGTCAGTGTGGGAATCCACAAGACCCTTCAGCCTCCAATGCTCTGGGACGGAGGCCTCGTCCACAGGGAGGAAGGGGTCAGAGTGACCTGAGCTCCTACTCAGAAGCAATTCTAATCCACTTTCCATCAGGGCCTGTGGGGAAGGGAAGATGAAGAAACGGAGCCTGCACCTGGCTGTGTGGGCGCAGTAGGTGAG-GGGGAGGATGAGGGCTCCTGAGAATGTGCCGTGTGGCAGAGACCCTGCAGCACACTCAGGAAGGGCTCTGGAAGGATCCAAGGAAAGTTTCCAAGAAGAGGGAAGAGTAAGTGACAGAGACCCTCAACCGTGGATTTCACTGAGGTGCCCATGATGATATAGGGAGAATGGGGGTGTCTGGGCAGGAAGAATATCATCGGGGTGAAACAGGTGGTGATGGGCTCCGTGTCAGAACTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAAAGGTCTCTGATCctaccccagcccccagcccct-ttcTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGGCTGGTCTTCCTGGCTCTATTCACAATGCTGGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAAGGGAGGAGACTCTATTAACCCAGCAGCAACAAACATAGGGTCTGACACAATGGAACTCACTTCCTGAAGGCCAAGAAAGACA-CTTGTAGGACAAAAGGGAAAGGGCGGTGGCTTGCTTGGTTCCATTCACTGACAACCCACAGGAGATGTCCagtcctctttttatttattattttattttattt-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47360756 901 + 50890351 ggcccccgtgtgagtgaaggctgtgccacct-ccagctgtggaaccttgggctaggcagcccctcctgagtccccaggttccccatc---------------------cgcaTCTGAGACTGTGGTCAGTGTGGGAATCCGTGAGACCCTTCAGCCTCCAATGCTCTGGGACGGAGGCCTCGTCCACAGGGAGGAAGGGGTC--AGTGACCTGAGCCCCTACTCAGGAGCGAGTCTAATCCACTCTCCATCAGGGCCTGTGGGGAAGGGAAGATGAAGAAACGAAGCCTGCACCTGGCTGTGTGGGCGCAGTAGGTGAG-GGAGAGGATGagggctcctgagagtgtgccgtgtggcagagatcctgcagcacactcaggaagggctctggaaggatccaaggaaagtttccaagaagagggaagagtaagtgacagagaccctCAACCGTGGATTTCACTGAGGTGCCCATGATGATATAGGGAGAATGGGGGTGTCTGGGCAGGAAGAATATCGTCAGGGTGAAACGGGTGGTGATGGGCTCCATGTCAGAACTCCTGTGGAGGGAGGGGCCTGGCCCACATGAAGAGGTCTCTGATCCTATCCCAGCCCCCAGCCCCTGTTCTCCAGGATGACACTGTGGGAATTCCATCAGGAGGGGTGTGATAGGACTGGTCTTCCTGGCTCTATTCACAATGCTGGCTGGGGCCTGGGAACCCATGGGGAGCCACAGGTGGAAAGGGAGGAGACTCGATGAACCCAGCAGCAACAAACATGGGGTCTG--ACAATGGAACTCACTTCCTGAAGGCCAAGAAAGACACCTTGTAGAACAAAAGGGAAAGGGTGGTGGTTTGCTTGGTTCCATTCACTGACAACCCACAGGAGATGTCCAGTCCTCTTTTTATTTAttattttattttatttta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=30495.000000 s hg38.chr19_GL949753v2_alt 432253 19 + 796479 ttttattttattttatttt s panTro4.chr19 59625266 19 + 63644993 ttttattttattttatttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554249 19 + 60714840 ttttattttactttatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218340 19 - 106955855 ttttttgtttttttttttt i nomLeu3.chr10 N 0 C 0 s rheMac3.chr19 60510321 19 + 64156825 ttttattttattttatttt i rheMac3.chr19 C 0 M 217 s macFas5.chr19 55609512 19 + 59248254 ttttattttattttatttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47361657 19 + 50890351 ttttattttattttatttt i chlSab2.chr6 C 0 I 12 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e papAnu2.chr19 47680982 0 + 51301725 C a score=356019.000000 s hg38.chr19_GL949753v2_alt 432272 229 + 796479 attttCACatggagttttgctcctattggccaggctggagtgcaatggcacgatcttgactcactgcaacctccacctctcaggttcaagcgattctcctgcctcagcctc-ctgcatagct-----gggattacaggcgactgccaccacagccaggtaa-tgtttgtatttttagtagagatgaggttttgccatcttggccaggctggtctcaaactcctgatctcatgtgat s panTro4.chr19 59625285 234 + 63644993 attttgagatggagttttgcttctgttggccaggctggagtgcaatggcgtgatcttgactcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctc-ctgcatagctgcatagggattactggcacctgccaccacagccaggtaa-tatttgtatttttagtagagatggagttttgccatcttggccaggctggtctcaaactcctgacctcatgtgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554268 229 + 60714840 attttgagatagagttttgctcctgttggccaggctggagtgcaatggcgcgatcttgacttactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctc-ccacgtagct-----gggattacaggcacctgccaccacagccaggtca-tgtttgtatttttagtaaagacagggtttcgccatcttggccagactggtctcaacctcctgacctcttgtgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218359 228 - 106955855 tttttgagacggagtctcgct-ctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctctctgagtagct-----gggactacaggcgcccgccaccacgcctggctaattttttgtagttttagtagagatggggtttcaccgtgttagccagaatggtctcaatctcctgacctc--gtgat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55609531 229 + 59248254 attttgagatggagttttgctcttgttggccaggctagagcacaatggtgcgatcttgactcactgcaacctctgccttctgggttcaagcgattctcctgcctcatcctc-ccatgtagct-----gggattacaggcgcctgccaccacagccaggtag-cgtttgtatttttagtaaagacgggatttcgtcatcttggccagactggtctcaaactcctgacctcatgagat i macFas5.chr19 C 0 I 5 s papAnu2.chr19 47680982 229 + 51301725 attttgagatggagttttgctcttgttggccaggctagggtgcaatggtgcgatcttgactcactacaacctccgcctcccgggttcaagcgattctcctgcctcatcctc-ccacgtagcc-----gggattacaggcgcctgccaccacagctaGGTag-cgtttgtatttttagtaaagacgggatttcgtcatcttggccagactggtctcaaactcctgacctcatgagat i papAnu2.chr19 C 0 I 5 s chlSab2.chr6 47361688 229 + 50890351 attttgagatggagttttgctcttgttggccaggctagagtgcaatggtgcaatcttgactcactacaacctccgcctcccgggttcaagcgattctcctgcctcatcctc-caacgtagcc-----aggattacaggcgcctgccaccacagccaggtag-cgtttgtattttgagtcaagacgggatttcgtcatcttggccagactggtctcaaactcctgacctcatgtgat i chlSab2.chr6 I 12 I 5 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e rheMac3.chr19 60510340 217 + 64156825 M a score=4690.000000 s hg38.chr19_GL949753v2_alt 432501 4 + 796479 ccgc s panTro4.chr19 59625519 4 + 63644993 ccgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554497 4 + 60714840 ccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218587 4 - 106955855 ccgc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55609765 4 + 59248254 ccgc i macFas5.chr19 I 5 C 0 s papAnu2.chr19 47681216 4 + 51301725 ctgc i papAnu2.chr19 I 5 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47361917 5 + 50890351 I e rheMac3.chr19 60510340 217 + 64156825 M a score=1868.000000 s hg38.chr19_GL949753v2_alt 432505 4 + 796479 ctgt s panTro4.chr19 59625523 4 + 63644993 ctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554501 4 + 60714840 ccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218591 4 - 106955855 ctgc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47681220 4 + 51301725 ccgt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47361917 5 + 50890351 I e macFas5.chr19 55609769 0 + 59248254 C e rheMac3.chr19 60510340 217 + 64156825 M a score=47860.000000 s hg38.chr19_GL949753v2_alt 432509 124 + 796479 atcagactgccaaagtgttgggattacaggcgtgagccaccacacccagccttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtcttaaactcctgacctcaggtgat s panTro4.chr19 59625527 124 + 63644993 atcagactcccaaagtgttggaattacaggcgtgagccaccacacccagccttttgcatttttagtagagatggggtttcaccatgttggtcaggctggtcttaaactcctgacctcaggtaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554505 124 + 60714840 ctcggactcccaaagtgttgggattacaggcgtgagccaccacacccagccttttgcatttttagtagagacgggatttcaccatgtaggtcaggctggtcttgaactcctgacctcaggtgat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218595 87 - 106955855 cttggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccTC-------------------------------------TAaggctggtcttaaactcctgacgtcaggtgat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47361917 5 + 50890351 I e papAnu2.chr19 47681224 0 + 51301725 C e macFas5.chr19 55609769 0 + 59248254 C e rheMac3.chr19 60510340 217 + 64156825 M a score=1579.000000 s hg38.chr19_GL949753v2_alt 432633 4 + 796479 ccat s panTro4.chr19 59625651 4 + 63644993 ccat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554629 4 + 60714840 ctgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218682 4 - 106955855 ccat i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47361922 4 + 50890351 ctgc i chlSab2.chr6 I 5 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e papAnu2.chr19 47681224 0 + 51301725 C e macFas5.chr19 55609769 0 + 59248254 C e rheMac3.chr19 60510340 217 + 64156825 M a score=3398.000000 s hg38.chr19_GL949753v2_alt 432637 3 + 796479 cca s panTro4.chr19 59625655 3 + 63644993 cca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554633 3 + 60714840 ccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218686 3 - 106955855 cca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55609769 3 + 59248254 ccg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47361926 3 + 50890351 cca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e papAnu2.chr19 47681224 0 + 51301725 C e rheMac3.chr19 60510340 217 + 64156825 M a score=2100.000000 s hg38.chr19_GL949753v2_alt 432640 1 + 796479 c s panTro4.chr19 59625658 1 + 63644993 c i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56554636 1 + 60714840 c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218689 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60510562 1 + 64156825 c i rheMac3.chr19 M 217 C 0 s macFas5.chr19 55609772 1 + 59248254 c i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47361929 1 + 50890351 c i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e papAnu2.chr19 47681224 0 + 51301725 C a score=1210965.000000 s hg38.chr19_GL949753v2_alt 432641 525 + 796479 ctcggccacccaaagtgctgggagtacagatgttagccaccgtacccagcGAGAGTTTCAGTGCTCTATCGGATTCCCTGCCTACTCCATGTTGCATGTAATGTTCCACCTCAGGGATGTTT-Ctctcctttctgtctccttcctcttctccttctccttttttctttctaatttttatttttttgagacagagccttgctctgttacccaggctagagtacagtggcacgatcccagctcactgcaacctctgcctcctgggttcaagagattctcctgactcagcctctcaagtagctgggattacaggcacccgccatcacacccagctagtttttgtatttttagtagagacgaggtttcaccatgttggccagactggtcttgaactcctgccctcaggtaatccacccgcctgtggccccc-caaagtgctgggattacaggcgtgagtcaccactcccagccCTGAATGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACTGAGCTTTCTTG s panTro4.chr19 59625659 518 + 63644993 cttggccacccaaagtgctgggattacagacgtgagccactgcacccagcAAGAGTTTCAGTGCTCTATCGGATTCCCTGTCTACTCCATGTTACATGTAATGTTCCACCTCAGGCATGTttcctctcctttctgtctccttcctcttctccttctccttttttctttctaatttttatttttttgagacagcgccttgctctgttacccaggctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgactcagtctctcgagtagctgggattacaggtacccgccatcacacccagctaatttttgtatttttagtagagacgaagtttcaccatgttggccaggctggtctcgaactcctgccctcaggtaatccaccagcctgcggccccctcaaagtgctggggttacaggcgtgactcaccactctcagccCTGAATGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCA---------Cttg i panTro4.chr19 C 0 I 5 s ponAbe2.chr19 56554637 523 + 60714840 ctcagcctcccaaagtgctgggattacaggcttgagccaccac-TCAAGTGAGAGTTTCAGTGCTCTATAGGATTCCCTGCCTATTCCATGTTACATGTAATGTTCCACCTCAGGCATGTTTCCtctcctttccgtctccttcctcttctccttctccttttttctttctaatttttatttttttgagacagagccttgctctgttacccaggctggagtgcagtggcacgatctcagctcactgcaacctctgtctcttgggttcaagagattctcctgactcagcctcttgagtagctggaattacaggcgcccgccatcacacccggctaatttttgtatttttagt--agacgaggtttcaccatgttggccaggctggtctcgaactcctgccctcaggtaatccatccgcctgtggccccc-caaagtgctgggattacaggcgtgagtcaccactcccagccCTGAATGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACTGGGCtttcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103218690 526 - 106955855 ctcggccacccaaattgctgggattacagacgtgaaccactgcacccagcGAGAGTTTCAGTGCTCTATCGGATTCTCTGCCTACTCCATGTTACATGTAATGTTCCACCTCAGGCATGTTTCCTCTCCTTTCCGTCTCCTTCCTCTTCTCCTTCTCCttttttctttctaatttttatttttttgggacagtgccttgctctgttacccaggctggagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgactcatcctctcaagtagctgggattacaggcacctgccatcacacccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtctcgaactcctgccctcaggtaatccacctgcctgcggccccc-caaggtgctgggattacaggtatgagtcaccactcccagccCTGAATGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACTGAGCtttcttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60510563 524 + 64156825 ctcggccacccaaagtgctgggattacagacatgagccaccgcacccagcAAGAGTTTCAGTGCTCTGTCGGATTCCCTGCCTACTCCATGTTACATGTAATGTTCCACCTCAGGCGTGTTTCCTCTCCTTTCTGTCTCCTTCCTCTTCTCtttctccttttttcttttcaattttta-ttttttgagacagagccttgctctgttgcccaggctggagcgcagtggcgcaatctgggctcactgcaacctctgcctcctgggttcaagcgattctctcacctcagcctcctgagtacctgggattacggatgcacgtcatcacacccggctattttttgtatttttagtagagatgaggtttcaccatgttggccaggttggtctcgaacttctgccctcagataatccacccgcct-cggcctcc-caaagtgctgggattacaggcgtaagtcaccactcccagtcCTGAGTGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACTGGGCtttcttg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55609773 524 + 59248254 ctcggccacccaaagtgctgggattacagacatgagccactgcacccagcAAGAGTTTCAGTGCTCTGTCGGATTCCCTGCCTACTCCATGTTACATGTAATGTTCCACCTCAGGCGTGTTTCCTCTCCTTTCTGTCTCCTTCCTCTTCTCtttctccttttttcttttcaattttta-ttttttgagacagagccttgctctgttgcccaggctggagcgcagtggcgcaatctcggctcactgcaacctctgcctcctgggttcgagagattctcctgactcagccttttgagtagctgagattacagttgcatgccaccacatccggctattttttgtatttttagtagagatgaggtttcaccatgttggccaggttggtctcgaacttctgccctcagataatccacccgcct-cggcctcc-caaagtgctgggattacaggcgtaagtcaccactcccagtcCTGAGTGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACTGGGCtttcttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47681224 524 + 51301725 ctcggccacccaaagtgctgggattacagacgtgagccaccgcacccagcaagaGTTTCAGTGCTCTATCGGATTCCCTGCCTACTCCATGTTACATGTAATGTTCCACCTCAGGCGTGtttcctctcctttccgtctccttcctcttctccttctccgtttttcttttcaattttta-ttttttgagacagagccttgctctgttgcccaggctggagtgcagtggtgcaatcttggctcactgcaacctctgcctcctgggttcaagagattctcctgactcaggctcttgagtagctgagattacaggtgcatgccaccatgcctggctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaacttctgccctcaggtaatccacccgcct-cggcctcc-caaagtgctgagattacaggcgtaagtcaccactCCCAGTCCTGAGTGATCTTTCCTCTTTAGTGTGTTCTCACAACCAACTCTCACTgagttttcttg i papAnu2.chr19 C 0 T 122 s chlSab2.chr6 47361930 524 + 50890351 ctgggccacccaaagtgctgggattacagacgtgagccactgcacccagTAAGAGTTTCAGTGCTCTATCGGATTCCCTGCCTACTCCATGTTACATGTAATGTTCCAACTCAGGCGTGTTtcctttcctttccgtctccttcctcttctccttctccttttttcttttcagttttta-tttttggagacagagccttgctctgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcctgggttcaagagattctcctgactcaggctcttgagtagctgagattacaggtgcatgccaccacgcctggctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaacttctgccctcaggtaatccacccgcct-cagcctcc-caaagtgctgggagtacaggcatgagtcaccactcccagtcCTGAGTGATCTTTCCTCTTTAGAGTGTTCTCACAACCACCTCTCACTGGGttttcttg i chlSab2.chr6 C 0 T 122 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=-1670.000000 s hg38.chr19_GL949753v2_alt 433166 19 + 796479 Ttttttgtttttgtttttg s ponAbe2.chr19 56555160 13 + 60714840 ttct---tttttcttt--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219216 18 - 106955855 ttcttttttttttttttt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511087 4 + 64156825 ttct--------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610297 4 + 59248254 ttct--------------- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47362454 122 + 50890351 T e papAnu2.chr19 47681748 122 + 51301725 T e panTro4.chr19 59626177 5 + 63644993 I a score=124508.000000 s hg38.chr19_GL949753v2_alt 433185 122 + 796479 tttttgtttttgtttttgGcagagtctggc-tttgttgcctatgctggagtgcagtggtgcaatctcagctcactgcaacctccgtctcctgggttcaagcgattctcccacctcagcctcct s panTro4.chr19 59626182 122 + 63644993 ttttttttttttttttaggcagagtctggc-tttgttgcccatgctggagtgcagtggtgggatctcagctcactgcaacctccgtttcccgggttcaagcaattctcccacctcagcctccc i panTro4.chr19 I 5 C 0 s ponAbe2.chr19 56555173 111 + 60714840 ------------ttttagacagagtctggcttttgttgcccaggctagagtgcagtggcaagatctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctccc i ponAbe2.chr19 C 0 I 259 s nomLeu3.chr10 103219234 106 - 106955855 ----------------tggcagagtctggc-tttgttgcccaggctggagtacagtggtgcgatctcagctcactgcaacctctgtctcccaggttcaagcgattctcccacctcagcctccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511091 116 + 64156825 ------ttttttttttagacagagtctgcc-tctcctgaccaggctggagtgcagtggtgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctctcacctcagcctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610301 116 + 59248254 ------ttttttttttagacagagtttggc-tctcctgaccaggctggagtgcagtggtgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctctcacctcagcctcct i macFas5.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47362454 122 + 50890351 T e papAnu2.chr19 47681748 122 + 51301725 T a score=126902.000000 s hg38.chr19_GL949753v2_alt 433307 109 + 796479 gagtagctgggattacaggcacccaccaccacacccagctaatttttgcatttttagtagacacaggg-tttcaccatgttggtca-------ggctggtctcgaactcctgacctt s panTro4.chr19 59626304 110 + 63644993 tagtagctgggattacgggcgcatgccagcacacccagctagtttttgtatttttagtagagacagggttttcaccatgttggtca-------ggctggtcttgaactcctgacctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56555543 116 + 60714840 gagtagctgggattacaggtgcccaccaccacacccagctaatttttgtatttttagtagagacaggt-tttcaccatgttggtcaccgttagagctggtctcgaactcctgatctt i ponAbe2.chr19 I 259 C 0 s nomLeu3.chr10 103219340 109 - 106955855 aagtagctgtgattacaggcgcccgccaccacacccagctaatttttgcgtttttagtagagacaggg-tttcaccatgttggtca-------ggctggtctcaaactcctgacctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511207 109 + 64156825 gagtacctgggattacggatgcacgtcatcacacccggctaatttttgtatttttagtagagacaggg-tttcaccatgttggtca-------ggttggtctcgaactcctgacctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610417 109 + 59248254 gagtacctgggattacggatgcacgtcatcacacccggctaatttttgtatttttagtagagacaggg-tttcaccatgttggtca-------ggttggtctcgaactcctgacctt i macFas5.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e chlSab2.chr6 47362454 122 + 50890351 T e papAnu2.chr19 47681748 122 + 51301725 T a score=96584.000000 s hg38.chr19_GL949753v2_alt 433416 42 + 796479 gtgatctgccagcctcagcctcccaaagtgctggaattacag s panTro4.chr19 59626414 42 + 63644993 gtgatcttcttgcctcggcctcccaaagtgctgggattacag i panTro4.chr19 C 0 T 350 s ponAbe2.chr19 56555659 42 + 60714840 gtgatctgcctgtcttagcctcccaaagtgctgggattacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219449 42 - 106955855 gtgatctgcctgcctcagcctcccaaagtgctgggattacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511316 42 + 64156825 gtgatccgcctgcctcagcctcccaaagtgctgggattacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610526 42 + 59248254 gtgatccgcctgcctcagcctcccaaagtgctgggattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47681626 42 + 51301725 gtaatccacccgcctcggcctcccaaagtgctgagattacag i papAnu2.chr19 T 122 C 0 s chlSab2.chr6 47362332 42 + 50890351 gtaatccacccgcctcagcctcccaaagtgctgggagtacag i chlSab2.chr6 T 122 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=24933.000000 s hg38.chr19_GL949753v2_alt 433458 12 + 796479 gcatgagccacc s panTro4.chr19 59626106 12 + 63644993 gcgtgactcacc i panTro4.chr19 T 350 C 0 s ponAbe2.chr19 56555701 12 + 60714840 gcatgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219491 12 - 106955855 gcgggagccacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511358 12 + 64156825 gcgtgagccacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610568 12 + 59248254 gcgtgagccacc i macFas5.chr19 C 0 T 351 s papAnu2.chr19 47681668 12 + 51301725 gcgtaagtcacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47362374 12 + 50890351 gcatgagtcacc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=88751.000000 s hg38.chr19_GL949753v2_alt 433470 57 + 796479 actcccagccCTGGATTATCTTTCCTCTTTAGTGTGTTCTCACAACTACCTCTCACT s panTro4.chr19 59626118 57 + 63644993 actctcagccCTGAATGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56555713 57 + 60714840 actcccagccCTGAATGATGTTTCCTCTTTACAGTGTTCTCACATCCACTTCTCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219503 57 - 106955855 actcccagccCTGGACTATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55610229 55 + 59248254 actcccagtcCTGAGTGATCTTTCCTCTTTAGTGTGTTCTCACAACCACCTCTCA-- i macFas5.chr19 T 351 C 0 s papAnu2.chr19 47681680 55 + 51301725 actCCCAGTCCTGAGTGATCTTTCCTCTTTAGTGTGTTCTCACAACCAACTCTCA-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47362386 55 + 50890351 actcccagtcCTGAGTGATCTTTCCTCTTTAGAGTGTTCTCACAACCACCTCTCA-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e rheMac3.chr19 60511370 0 + 64156825 C a score=7834.000000 s hg38.chr19_GL949753v2_alt 433527 12 + 796479 GCTGGGttttct s ponAbe2.chr19 56555770 9 + 60714840 G---GGTTTTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219560 9 - 106955855 ---GAGttttct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55610284 11 + 59248254 -CTGGGCtttct i macFas5.chr19 C 0 I 285 s papAnu2.chr19 47681735 11 + 51301725 -CTgagttttct i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47362441 11 + 50890351 -CTGGGttttct i chlSab2.chr6 C 0 I 2 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e rheMac3.chr19 60511370 0 + 64156825 C e panTro4.chr19 59626175 2 + 63644993 I a score=753.000000 s hg38.chr19_GL949753v2_alt 433539 12 + 796479 ctctttcttttt s ponAbe2.chr19 56555779 12 + 60714840 CTCCCCCttttt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103219569 0 - 106955855 C e chlSab2.chr6 47362452 2 + 50890351 I e papAnu2.chr19 47681746 2 + 51301725 I e macFas5.chr19 55610295 285 + 59248254 I e rheMac3.chr19 60511370 0 + 64156825 C e panTro4.chr19 59626175 2 + 63644993 I a score=182.000000 s hg38.chr19_GL949753v2_alt 433551 2 + 796479 tt s panTro4.chr19 59626177 2 + 63644993 tt i panTro4.chr19 I 2 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e ponAbe2.chr19 56555791 0 + 60714840 C e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103219569 0 - 106955855 C e chlSab2.chr6 47362452 2 + 50890351 I e papAnu2.chr19 47681746 2 + 51301725 I e macFas5.chr19 55610295 285 + 59248254 I e rheMac3.chr19 60511370 0 + 64156825 C a score=-1112.000000 s hg38.chr19_GL949753v2_alt 433553 3 + 796479 ttt- s panTro4.chr19 59626179 3 + 63644993 ctt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56555791 1 + 60714840 --t- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47681748 3 + 51301725 -ttc i papAnu2.chr19 I 2 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e nomLeu3.chr10 103219569 0 - 106955855 C e chlSab2.chr6 47362452 2 + 50890351 I e macFas5.chr19 55610295 285 + 59248254 I e rheMac3.chr19 60511370 0 + 64156825 C a score=343574.000000 s hg38.chr19_GL949753v2_alt 433556 286 + 796479 tttttttttttttttttgagacagtccggctttgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccacctcccaggttcaagcgattctcccacctcagcctccctagtagctgggattacaggcgcatgccagcacacccagctagtttttgtatttttagtagagacaggggtttcaccatgttggtcaggctggtcttgaactcctgaccttgtgatcttcctgcctcggcctcccaaagtgctgggattacaggtgtaagccact s panTro4.chr19 59626182 286 + 63644993 ttttttttttttttttaggcagagtctggctttgttgcccatgctggagtgcagtggtgggatctcagctcactgcaacctccgtttcccgggttcaagcaattctcccacctcagcctccctagtagctgggattacgggcgcatgccagcacacccagctagtttttgtatttttagtagagacagggttttcaccatgttggtcaggctggtcttgaactcctgaccttgtgatcttcttgcctcggcctcccaaagtgctgggattacaggtgtaagccact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56555792 279 + 60714840 tttttttttttttttgagacagagtctggctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcccacctcagcctccctagcagctgggattacaggcgcatgccagcacacccggctagtttttgtatttttagtagagac-ggggtttcaccatgttggtcaggctggtcttgaactcc------tgtgatccgcccgcctcagcctccgaaagtgctgggattacaggcataagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219569 285 - 106955855 -ttctttttttttttgagacagagtctggctttgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctccacctcccgagttcaagcgattctcccacctcagcctccctagtagctgggattacgggtgcatgccagcacacccagctagtttttgtatttttagtagagacaggggtttcaccatgttggtcaggctggtcttgaactcctgaccttgtgatcctcctgcctcggcctcccaaagtgctgggattacaggtgtgagccact i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47681751 285 + 51301725 ttttttttttttttttagacagagtctggctctcttgaccaggctggagcgcagtggcatgatctcagctcactacaacctccgcctcctgggttcaagtgattctctcacctcagcctcccgagtagctgggattacggatgcatgccatcacacccagctaatttttgtatttttagtagagac-agggtttcaccatgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgcctcggcctcccaaagtgctggaattacaggcatgagccacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47362454 285 + 50890351 ttctttttttttttttcgacagagtctggctctcttgaccaggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcctgggttcgagtgattctctcacctcagcctcccgagtagctgggattacggatgcatgccatcacacccggctaatttttgtatttttagtaaagac-agggtttcaccatgttggtcaggttggtctcgaactcctgaccttgtgatccacctgcctcggcctcccaaagtgctcggattacaggcgtgagccacc i chlSab2.chr6 I 2 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I e macFas5.chr19 55610295 285 + 59248254 I e rheMac3.chr19 60511370 0 + 64156825 C a score=1177246.000000 s hg38.chr19_GL949753v2_alt 433842 500 + 796479 gcacccagccAGCTTTCTCATTCTTATCCCTTAGTTCTCTGCCAGGGAATAAGATAGAAACCATTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATGTTTCCACT--TCTCTCTCTTTGGTAATAAATCAATTAATTGAGAAACAAGTAGCTAAATGTTCATCTTCTGCTAGTCTGCATCCCCTTATTTTCCCAGAGCCTCCCCTAATGAAACTGACTTTATTTACTGAACGCAGGAAATGGGTCTCTCCAGATCAGGATGACTTTCTGCTGGG-AAATATTTGTCTTTGCATCAGTGGGGAAAAAGAAAGCCGATGTCATGAGTGGAGGCTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACCCA-GCTAAGTTGGGAGCTGACATAGATATGATGTTGGGTCCACCCTCCACGGGCAGGTTTTCAGACAAAGGATCCCTGGCAATCAGGGGACACCTCAGGTCTGGGCTGAGATGTGTGCAGAGGGCCTGGGT s panTro4.chr19 59626468 501 + 63644993 gcacccagccAGCTTTCTCGTTCTTATCCCTTAGTTCTCTGCCAAGGAATAAGATAGAAGCCATTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATGTTTCCACT--TCTCTCTCTTTGGTAATAAATTAATTAATTGAGAAACAAGTAGCTAAATGTTCATCGTCTGCTAGTCTGCATCCCCTTATTTTCCCAGAGCCTCCCCTAATGAAGCTGACTTTATTTACTGAATGCAGGAAATGGGTCTCTCCAGATCAGGGTGACTTTCTCCTGGGGAAATATTTGTCTTTGCATCAGTGGGGAAAAAGAAAGCCGATGTCATGAGTGGAGACTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACCCA-GCTAAGTTGGGAGCTGACATAGATATGATGTTGGGTCTACCCTCCACGGGCAGGTTTTCAGACAAAGGAGCCCTGGCAATCAGGGGACACCTCAGGTCTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56556071 502 + 60714840 gtgctcagctAGCTTTCTCGTTTTTATCTCTTAGTTGTCTGCCAGGGAATAAGATGGAAACCATTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATGTTTCCACT--TCTCTCTCTTTGGTAATAAATTAATTAATTGAGAAACAAGCCGCTGAATGTTCATCTTCTGCTAATCTGCATCCCCTTATTTTCCCAGAGCCTCCCCTAATGAAACTGACTTTATTTACTGAACACAGGAAGTGGGTCTCTCCAGATAGGGATGACTTTCTGCTGGGGAAATATTTGTCTTTGCATCAGTGGGGAAAAAGAAAGTCGATGTCATGAGTGGAGGCTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACCCACGCTAAGTTGGGAGCTGACCTAGATGTGATGTTGGGTCTACCCTCCACGGGCAGGTTTTCAGACAAAGGAGCCCTGGCAATCAGGGGACACCTCAGGTCTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103219854 502 - 106955855 gtgcccagccAGCTTTCTCGTTCTTATCCCTTAGTTCTCTGCCAGGGAATAAGATAGAAGCCATTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATGTTTCCACT--TCTCTCTCTTTGGTAATAAATTAATTAATTAAGAAACAAGTTGCCGAATGTTCATCTTCTGCTAATCTGCATCCCCTTATTTTTCCAGAGCCTCCCCTAATGAAACTGACTTTATTTACTGAACGCAGGAAATGGGTCTCTCCAGATCAGGATGACTTTCTGCTGGGGAAATATTTGTCTTTGCATCGGTGGGGAAAAAGAAAGTCGATGTCCTGAGTGGAGGCTCTGAGAAAATAAGGGCAGTGTTTTCAGTTTAGACCCATGCTAAGTCGGGAGCTGACCTGGATGTGATGTTGGGTCTACCCTCCAAGGGCAGGTTGTCAGACAAAGGAACCCTGGCAATCAGGGGACACCTCAGGTCTGGGCTGAGATGTATGCAGAGGGCCTGGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511370 502 + 64156825 gcgcccggccAGCTTTCTTGTTCTTATCCCTTAGTTCTCTGCCAGGGAATAAGATAGAAAACACTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATATTTCCACT--TCTCTCTCTTTGGCAATAAATTAATTAATTGAGAAACAAGTTGCTGAATGTTCATCTTCTGCTAAACTGCATCCCCTAATTTTCCCAGAGCCTCCCCTAATGAAATCGACTGTATTTACTGAAAGCAGGAAGTGGGTCTCTTCAGATCAGGATGACTGTCTCCTGGGGACATATTTGTCTTCGCATCGGTGGGGAAAAGGAAAGTCGATGTCATGAGTGGAGGCTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACTCCCGCCCAGTTGGTAGCTGACCTAGACGTGATGTTAGGTCTACCCTCCACGGGCAGGTTTTCAGACAAAGGAGCCCTGGCCATCAGGGGACACCTCAGGTTTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55610580 504 + 59248254 gcgcccggccAGCTTTCTTGTTCTTATCCCTTAGTTCTCTGCCAGGGAATAAGATAGAAAACACTCCCTCAACCACATTCTAGTCATGGTCCCTATTCTCATATTTCCACTTCTCTCTCTCTTTGGCAATAAATTAATTAATTGAGAAACAAGTTGCTGAATGTTCATCTTCTGCTAAACTGCATCCCCTAATTTTCCCAGAGCCTCCCCTAATGAAATCGACTGTATTTACTGAAAGCAGGAAGTGGGTCTCTTCAGATCAGGATGACTGTCTCCTGGGGACATATTTGTCTTCGCATCGGTGGGGAAAAGGAAAGTCGATGTCATGAGTGGAGGCTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACTCCCGCCCAGTTGGTAGCTGACCTAGACGTGATGTTAGGTCTACCCTCCACGGGCAGGTTTTCAGACAAAGGAGCCCTGGCCATCAGGGGACACCTCAGGTTTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i macFas5.chr19 I 285 C 0 s papAnu2.chr19 47682036 502 + 51301725 gcacccggccggctTTCTTGTTCTTATCCCTTAGTTCTCTGCCAGGGAATAAGAGAGAAACCGTTCCCTCAACCACATTCTAGTCGTGGTCCCTATTCTCCTATTTCCACT--TCTCTCTCTTTggcaataaattaattaattgagaAACAAGTTGCTGAATGTTCATCTTCTGCTAAACTGCATCCCCTAATTTTCCCAGAACCTCCCCTAATGAAATCGACTGTATTTACTGAAAGCAGGAAGTGGGTCTCTTCAGATCAGGATGACTGTCTCCTGGGGAAATATTTGTCTTCGCATCGGTGGGGAAAAGGAAAGTCGATGTCATGAGTGGAGGCTCTGAGAAAATAAGGGCTGTGTTTTCAGTTTAGACTCCCGCCCAGTTGGTAGCTGACCTAGACGTGATGTTAGGTCTACCCTCCACGGGCAGGTTTTCAGACAAAGGAGCCCTGGCCATCAGGGGACACCTCAGGTTTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47362739 502 + 50890351 acacccagccAGCTTTCTTGTTCGTATCCCTTAGTTCTCTGCCAGGGAATAAGATAGAAACCGTTCCCTCAACCACATTCTAGTTGTGGTCCCTATTCTCATATTTCCACT--TCTCTCTCTTTGGCAATAAATTAATTAATTGAGAAACAAGTTGCTGAATGTTCATCTTCTGCTAAATTGCATCCCCTAAGTTTCCCAGAGCCTCCCCTAATGAAATCGACTGTGTTTACTGAAAGCAGGAAGTGGGTCTCTTCAGATCAGGATGACTGTCTCGTCGGGAAATGTTTGTCTCCGCATCGGTGGGGAAAAGGAAAGTCGATGTCATGAGTGGAGGCTCTGAGAAAGTAAGGGCTGGGTTTTCAGTTTAGACTCCCGCCCAGTTGGTAGCTGACCTAGACGTGATGTTAGGTTTACCCTCCGCGGGCAGGTTTTCAGACAGAGGAGCCCTGGCCATCAGGGAACACCTCAGCTTTGGGCTGAGATGTGTGCAGAGGGCCTGGGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102962112 9972 + 122678785 I e calJac3.chr22 45796813 24954 + 49145316 I a score=395700.000000 s hg38.chr19_GL949753v2_alt 434342 166 + 796479 CCTCCTGAGCCCCTGCACTGG-----GGGGGGAATAAGAGACAGGCCCAGCA---AGGGGC--TG-----TCCACTTCCTGTGGGTTCACAGCTGTGGGGACCCA--GGCAGGCGGCAGCAGGCTCTGACTTAACCACATCC-GTGCATCTGTCTGTCATGGAGGGCCATGTGGTCACCTGTCC s panTro4.chr19 59626969 165 + 63644993 CCTCCTGAGCCCCCGCACTGG-----GGGGG-AATCAGAGACAGGCCTAGCA---AGGGGC--TG-----TCCACTTCCTGTGGGTTCACAGCTCTGGGGACCCA--GGCAGGCAGCAGCAGGCTCTGACTTAACCACATCC-GTGCATCTGTCTGTCATGGAGGGCCATGTGGTCACCTGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56556573 164 + 60714840 CCTCCTGAGCCCCTGCACTGG-----GGGG--AACAAGAGACAGGCCCAGCA---AGGGAC--TG-----TCCACTTCCTGTGGCTTCACAGCTGTGGGGACCCA--GGCAGGCGGCAGCAGGCTCTGACTTAACCACATCC-GTGCATCTGTCTGTCATGGAGGGCCATGTGGTCTCCTGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103220356 164 - 106955855 CCCCCTGAGCCCCCGCACTGG-----GGGG--AATCAGAGACAGGCCTAGCC---ACGGGC--CA-----TCCACTTCCTGTGAGTTCACAGCTGTGGGGACCCA--GGCAGGCAGCAGCAAGCTCTGACTTAACCACATCC-GTGCATCTGTCTGTCATGGAGGGCCATGCGGTCACCTGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60511872 166 + 64156825 CCTCCTGAGCCCCCACACTGG-----GGGG--AATCAGAGACAGGCCCAGCA---AGAGGCTGTG-----TCCACTTCCTGTGGGTTGACAGCTGTGGGGACCCA--GACAGGCGGCAGCAGGCTCTGACCTAACCACATCC-GCGTGTCTGTCTGTCCTGGAGGGTCGTGTGGTCTCCCGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611084 166 + 59248254 CCTCCTGAGCCCCCACACTGG-----GGGG--AATCAGAGACAGGCCCAGCA---AGAGGCTGTG-----TCCACTTCCTGTGGGTTGACAGCTGTGGGGACCCA--GACAGGCGGCAGCAGTCTCTGACCTAACCACATCC-GCGCGTCTGTCTGTCCTGGAGGGTCGTGTGGTCTCCCGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47682538 166 + 51301725 CCTCCTGAGCCCCCACACTGG-----GGGG--AATCAGAGACAGGCCCAGCA---AGAGGCTGTG-----TCCACTTCCTGTGGGTTGACAGCTGTGGGGACCCA--GACAGGCGGCAGCAGGCTCTGACTTAACCACATCC-GCGCGTCTGTCTGTCCTGGAGGGTCGTGTGGTCTCCTGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47363241 166 + 50890351 CCTCCTGAGCCCCCACACTGG-----GGGG--AATCAGAGACAGGCCCAGCA---AGAGGCTGTG-----TCCACTTCCTGTGGGTTGACAGCTGTGGGGACCCA--GACAGGCGGCAGCAGGCTCTGCCTTAACCACATCC-GCGCGTCTGTCTGTCCTGGTGGGTCGTGTGGTCTCCTGTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102972084 179 + 122678785 CCTCGGGATCCACTGTAGTGGCCTCAAAGA--CACCAGAGCCAGGCTAGGCCTCTGGGGAC--TGGCTGTTCCCCTTCCTGTGGGGCTGATGATGTGATAACCCCGTGACAGTGAGGACTGGGCTCTGA-GTGGCCACACCCTGTGTGTCTATCTGTCCTGCAGGCACCGAGGTCCCTCCATCT i canFam3.chr1 I 9972 T 13538 e calJac3.chr22 45796813 24954 + 49145316 I a score=429975.000000 s hg38.chr19_GL949753v2_alt 434508 176 + 796479 CACAGCTGGAGCACGCAGAGCAGGCATCATGGTGTCCATCCTCACTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGAGGTGGGGAGGGTCCCACAGCAG---CCTTGTTCACCAGAGAGCCTCAGGGCTCCAGTGGCT-ACTGGTGCTCCAA s panTro4.chr19 59627134 176 + 63644993 CACAGCTGGAGCACACAGAGCAGGCATCATGGTGTCCATCCTCACTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGAGACAGGAGGGGCACTGCGCTGAGGTGGGGAGGGTCCCACAGCAG---CCTTGTTCACCAGAGAGCCTCAGGGCTCCAGTGGCT-ACTGGTGCTCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56556737 175 + 60714840 CACAGCTAGAGCACGCAGAACAGGCATCATGGTGTCCATCTTCACAGCTC-ACTGTGCCTCAGTCAGTGGTGGAGAGAGGAGGGACAGGAGGGACACTGGGCTGGGGTGGAGGGGGTCCCACAGCAG---CCTTGTTCACCAGAGAGCCTCAGGGCTCCAGTGGCT-ACTGGTGCTCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103220520 176 - 106955855 CACAGCTGGAGCACGCAGAGCAGGCATCATGGTGTCCATCCTCACTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGGGGTGGAGGGGGTCCCACAGCAG---CCTTGTTCACCAGAGAGCCTCAGGGCTCCAGTGGCT-ACTGGTGCTCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512038 176 + 64156825 CACAGCTGGAGCACGCAGAGCAGGCATCATGGTGTCCATCCTCCCTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGGGGTGAGGGGGCTCCCACAGCAG---CCTTGTTCACTGGAGACCCTCAGGGGTCCAGTGGCT-ACTGGTGCTCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611250 176 + 59248254 CACAGCTGGAGCACGCAGAGCAGGCATCATGGTGTCCATCCTCCCTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGGGGTGAGGGGGCTCCCACAGCAG---CCTTGTTCACTGGAGACCCTCAGGGGTCCAGTGGCT-ACTGGTGCTCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47682704 176 + 51301725 CACAGCTGGAGCACGCAGAGCAGGCATCATGGTGTCCATCCTCCCTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGGGGTGAGGGGGGTCCCACAGCAG---CCTTGATCACTGGAGACCCTGAGGGGTCAAGTGGCT-ACTGGTGCTCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47363407 176 + 50890351 CACAGCTGGAGCACGAAGAGCAGGCATCATGGTGTCCATCCTCCCTGTTCTTCTGTGCCTCAGTCAGTGGTGGAGAGACGAGGGACAGGAGGGGCACTGGGCTGGGGTGAGGGGTGTCCCACAGCAG---ACTTGTTCACTGGAGACCCTCAGGGGTCCAGTGGCT-ACTGGTGCTCCAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19914912 162 - 122678785 CACAGTTGATCCAGAGACAGGAAACACCATGAC-TGCACCCTCACAGCCCAGTTCTGTCTAGGTGGGATTTGATGAGAGAAGGG------GATGCCCTAGTCTGGGA-AGGACCCACCCCACAGCCAGGCCCTGGTCTGTCAGAGATCCC--AGGCCTAGGAGGCTCACAGG-------- i canFam3.chr1 I 7251 C 0 e calJac3.chr22 45796813 24954 + 49145316 I a score=219178.000000 s hg38.chr19_GL949753v2_alt 434684 80 + 796479 CAGGAAGGGAAGCAGCCACACCTCTGTGTTC-----CAAATCCCCCACAGGAAACTCTTCTCCATGGCTGAGTCTGGG--CCAGAAA s panTro4.chr19 59627310 80 + 63644993 CAGGAAGGGAAGCAGCCACACCTCTGTGTTC-----CAAATCCCCCACAGGAAACTCTTCTCCATGGCTGAGTCTGAG--CCAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56556912 79 + 60714840 CAGGAAGGGAAGCAGCCACACCTCTGTATTC-----CAAATCCCCCACAGGAAACTCTTCTCCATGGCTGAGTCTG-G--CCAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103220696 80 - 106955855 GGGGAGGGGAAGCAGCCACACCTCTGTATTC-----CAAATCCCCCACAGGAAACTCTTCTCCATGGCTGAGTCTGGG--CCAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512214 80 + 64156825 CAGGAAGGGAAGCAGTCACACCTCTGTCTTC-----CAAATCCCCCACAGGAAACTCTCCTCCATGGCTGAGTCTGGG--CCAGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611426 80 + 59248254 CAGGAAGGGAAGCAGTCACACCTCTGTCTTC-----CAAATCCCCCACAGGAAACTCTCCTCCATGGCTGAGTCTGGG--CCAGAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47682880 80 + 51301725 CAGGAAGGGAAGCCGTCACACCTCTGTCTTC-----CAAATCCCCCACAGGAAACTCTCCTCCATGGCTGAGTCTGGA--ACAGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47363583 77 + 50890351 CAGGAAGGGAAGA---CACACCTCTGTCTTC-----CAAATCCCCCACAGGAAACTCTCCTCCATGGCTGAGTCTGGG--CCAGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45821767 84 + 49145316 CAGGGAGGGGAGGAGCTG---CTCAGGCTTCAGGGGCAAATCTCTCACAGGGAACTCTCTTCCAGGGCTGAGTCTGGGCTCCAGGAA i calJac3.chr22 I 24954 I 98 s canFam3.chr1 19915074 76 - 122678785 CAGAAGGGGTTCCA-------CTCAGGATACAGGG-TAAACCTCTCACA-GAGACCTTCTTCCAGGACTGAGTGTGGGCTCCAGG-- i canFam3.chr1 C 0 C 0 a score=196506.000000 s hg38.chr19_GL949753v2_alt 434764 81 + 796479 GCCCAAGCACTTGCAGGTGAGTCTCTGCTAA-CCTCCCATGCCTGACCTCACACTCAGCACCTGGACTCTCATCT--CAGGGGC s panTro4.chr19 59627390 81 + 63644993 GCCCGAGCACCTGCAGGTGAGTCTCTGCTAA-CCTCCCATGCCCGACCTCACACTCAGCACCTGGACTGTCATCT--CAGGGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56556991 81 + 60714840 GCCCGAACACCTGCAGGTGAGTCTCTGCTAA-CCTCCCATGCCTGACCTCACACTCAGCACCTGGATTCTCATCT--CAGGGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103220776 81 - 106955855 GCCGGAGCACCTGCAGGTGAGTCTCTGCTAA-GCTCCCACGCCCTACCTCACACTCAGCACCTGGACTCTCATCT--CAGGGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512294 81 + 64156825 ACCCGAGCACCTGCGGGTGAGTCTCTGCTAA-GCTCCCCTGCCCTACCTCACACTCAGCACCCGGACTCTCATCT--CAGGGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611506 81 + 59248254 ACCCGAGCACCTGCGGGTGAGTCTCTGCTAA-GCTCCCCTGCCCTACCTCACACTCAGCACCCGGACTCTCATCT--CAGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47682960 81 + 51301725 ACCCGAGCACCTGTGGGTGAGTCTCTGCTAA-GCTCCCATGCCCTACCCCACACTCAGCACCCGGACTCTCATCT--CAGGGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47363660 81 + 50890351 ACCCGAGCACCTGCAGGTGAGTCTCTGCTAA-GCTCCCACGCCCTACCTCACACTCAGCAGCCGGACTCTCATCT--CAGGGCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19915150 84 - 122678785 ACCTGAGTATAGATAGGTGAGTCTGTCCCCATGGTCCCACTCCCACCTCCTTACTGGGGACAGGGACCACCCACCGGCAGGGGC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45821851 98 + 49145316 I a score=1247050.000000 s hg38.chr19_GL949753v2_alt 434845 408 + 796479 -------------TTCTGAACTGAGGGTGA-GAAAATCAAGAGGGTCT-GTGACC-TGAGCTGGGA-ATGAGGAGCGGGGGAGGTCTGTGGACCCCAGCCTGTGGTT---TCTT------CCAGGGACCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATTACCTGGGAGAGCCCCATGACCCTCTGGTGCCAGGGGACCCTGGATACCCAGGGTTACTATCT-CACCAAG-GAAGGAAACCCCATGACCTGGTACCAACAGAGCCCACCAGAGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACCATGCAGGGAGATACCACTGTCACTATCTCAGCCCTGCAGGCTGGTCAGAGCGCAGCGAGCCCCTGGAGCTGGTGGTGACAGGTAAGAGGACACTCAGGGGTCCCAG s panTro4.chr19 59627471 407 + 63644993 -------------TTCTGAACTGAGGGTGA-GAAAATCAAGAGGGTCC-GTGACC-TGAGCTGGGA-ATGAGGAGCCAGGGAGGTCTGTGGACCCCAGCCTGTGGTT---TCTT------TCAGGGACCCTCCCCAAACCCAGCCCCTGGGCTGAGCCAGGCTCCGTGATTACCTGGGAGAGCCCCATGACCCTTTGGTGCCAGAGGACCCTGGATACCCAGG-TTACTATCT-CACCAAG-GAAGGAAGCCCCATGACCTGGTACCAACAGAGCCCACCAGAGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACCATGCAGGGAGATACCACTGTCACTATCTCAGCCCTGCAGGCTGGTCAGAGCGCAGCAAGCCCCTGGAGCTGGTGGTGACAGGTGAGAGGACACTCAGGGGTCCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56557072 408 + 60714840 -------------TTCTCAACCGAGGGTGA-GAAAATCAAGAGGGTCC-ATGACC-TGAGCTGGGA-ATGAGGGGCGGGGGAGGTCTGTGGACCCCAGCCTGTGGTT---TCTT------CCAGGGAACCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGTTCTGTGATTACCTGGGAGAGCCCCATGACCCTCTGGTGCCAGGGGACCCTGGATACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCCCCATGACCTGGTACCAACAGAGCCCACCAGAGCCCAAAAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACCATGCAGGGAGATACCGCTGTCACTATCTCAGCCCTGCAGGCTGGTCAGAGCGCAGTGAACCCCTGGAGCTGGTGGTGACAGGTGAGAGGACACTCAGGGGTCCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103220857 407 - 106955855 -------------TTCTCAGCTGAGGGTGA-GAAAATCAAGAGGGTCT-GTGACC-TGAGCTGGGA-ATGAGGGGCGGGGGAGGTCTGTGGACCCCAG-CTGTGGTT---TCTT------CCAGGGACCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATTACCTGGGGGAGCCCCATGACCCTCTGGTGCCAGGGGACCCTGGGTACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCCCCATGACCTGGTACCAACAGAGCCCACCAGAGCCCAGCAACAAGACCGACTTCTTCATCCCATCCATGAGAGAGCACCACGCAGGGAGATACCGCTGTCACTATCGCAGCCCTGCAGACTGGTCAGAGCGCAGTGACCCCTTGGAGCTGGTGGTGACAGGTAAGAGGACACCCAGGGGTCCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512375 408 + 64156825 -------------TTCTGAACTGAGGGTGA-GAAAATCAAGAGGGTCC-ATGGCC-TGAGCTGGGA-ATGAGGGGCAGGGGAGGTCTGTGGACTCCAGCCTGTGGTT---TCTT------CCAGGGATCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCTCCGTGACCCTCTGGTGCCAGGGGACCCTGGATACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCACCATGACCTGGCACCAACAGAGCCCACCAGAGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACTATGCAGGGACATACCGCTGTCACTATCTCAGCTCTGCAGGCTGGTCAGAGCTCAGTGACCCGCTGGAACTGGTGGTGACAGGTAAGAGGACACTCAGGGGTCCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611587 408 + 59248254 -------------TTCTGAACTGAGGGTGA-GAAAATCAAGAGGGTCC-ATGGCC-TGAGCTGGGA-ATGAGGGGCAGGGGAGGTCTGTGGACTCCAGCCTGTGGTT---TCTT------CCAGGGATCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCTCCGTGACCCTCTGGTGCCAGGGGACCCTGGATACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCACCATGACCTGGCACCAACAGAGCCCACCAGAGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACTGTGCAGGGACATACCGCTGTCACTATCTCAGCTCTGCAGGCTGGTCAGAGCTCAGTGACCCGCTGGAACTGGTGGTGACAGGTAAGAGGACACTCAGGGGTCCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47683041 417 + 51301725 -------------TTCTGAACGGAGGGTGA-GAAAATCAAGAGGGTCC-ATGGCC-TGAGCTGGGA-ATGAGGGGCGGGGGAGGTCTGTGGACTCCAGCCTGTGGTTGGATCCTCCCCAACCAGGGATCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCTCCGTGACCCTCTGGTGCCAGGGGACCCTGGATACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCCCCATGACCTGGCACCAACAGAGCCCACCAGAGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGACAGCACTATGCAGGGACATACCACTGTCACTATCTCAGCTCTGCAGGCTGGTCAGAGCTCAGTGACCCGCTGGAACTGGTGGTGACAGGTAAGAGGACACTCAGGGGTCCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47363741 408 + 50890351 -------------TTCTGAACGGAGGGTGA-GAAAACCAAGAAGGTCC-ATGGCC-TGAGCTGGGA-ATGAGGGGTGGGGGAGGTCTGTGGACTCCAGCCTGTGGTT---TCTT------CCAGGGATCCTCCCCAAACCCAGCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAGCTCCGTGACCCTCTGGTGCCAGGGTACCCTGGATACCCAGGGTTACCATCT-CACCAAG-GAAGGAAGCCCGATGACCTGGCACCAACAGAGCCCACCAGGGCCCAGGAACAAGACCAACTTCTTCATCCCATCCATGAGAGAGCACTATGCAGGGGCATACCGCTGTCACTATCTCAGCTCTGCAGGCTGGTCAGAGCTCAGTGACCCGCTGGAACTGGTGGTGACAGGTAAGAGGACACTCAGGGGTCCCAG i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45821949 404 + 49145316 -------------TTCTGACTTATGGGGG-------TCTGGAGGGTCCTGTGGCTGGGAGCTGGAATCTGTTAGGTGGGAAATGACT-TAGAATCTGACCTTTGATT---TCCT-----GCCAGAGACCTTCCACAAGCCCACCCTCTGGGCTGAGCCAGGCTCTATGATCACCCAGGAGAGTCCCGTGACCCTCAGATGTCAGGGGAGCCTGGAAACCCAGGAGTACCATCTATATCGAGAAAAAAAAGCAGCATA--CTGGATTACATGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCAGTCCATTGCTGGGGAACACACAGGGCGGTATCGCTGTCAGTATCACAGACGCACTCGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGTGAGA-GACACGCAGGGGTCCCAG i calJac3.chr22 I 98 C 0 s canFam3.chr1 19915234 416 - 122678785 TGAAGATCAACAGCTCTGGGCTGACAGAGGCGGGGCACCTGGGGGTTT-GGGGC--TGAGCTGGGA-ACTGAAGGTGGGGAGGGTCT-TGTGACCCAGCCTGT--TT---CCTT------CCAGGGACCCTCCCCACACCCACCATCTGGACTAAGCCAGGCTCTGTGATCCCCTTGAAGACACCTGCAACCATCTGTTGTAAGGGGAGCCTGAAGGCCCAGGAGTGCCACCT-CCATAAA-GAGGGACACTCAGGAACCTGGGACAGACAGAAGGCACTGGAGTCCAAGGACAAGGACAAGTTCTCCATCACACACATTACAGGTGTATATGCAGGACGGTATCACTGTTACTATGAAAGCACCACTGACTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGTGACAGGTGCGAGCCCACACAGGG--CCCAG i canFam3.chr1 C 0 C 0 a score=46747.000000 s hg38.chr19_GL949753v2_alt 435253 16 + 796479 CCCCAGGCTCTGCCTG s panTro4.chr19 59627878 16 + 63644993 TCCCAGGCGCTGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56557480 16 + 60714840 CCCCAGGCTCTGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103221264 16 - 106955855 CCCCAGGCTCTGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512783 16 + 64156825 CCCCAGGCTCTGCCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55611995 16 + 59248254 CCCCAGGCTCTGCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47683458 16 + 51301725 CCCCAGGCTCTGCCCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45822353 16 + 49145316 CCCCAGGCTCTGCCCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19915650 16 - 122678785 CCCCAGGCTCTGCCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47364149 3 + 50890351 I a score=1296908.000000 s hg38.chr19_GL949753v2_alt 435269 426 + 796479 CAGGAAGGGGGTCAGCTCTCAAGGGCATCTCCGTTCTAATAACTCAGCCCTGGGGGATGATGTGG-GACGCGTGAGCCCCATTTAAGACAGTGTCTCCTTCTCTCCTAGGAGCCCACAGAAAACCCACTCTCTCAGCCCTGCCGAGCCCTGTGGTGACCTCAGGAGAGAACGTGACCATCCAGTGTAGCTCAAGGGTGGGATTTCACAGGTTCATTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAAGGGGCTGTCCCTTGTCCCTGGCCCTGTTCCCTGTGGGCCGTGTGGCTGCCAGTCACCGGTGGATGTTCAGATGCTATGGGCATTACACGAACTTCCCCTGGGTGTGGTCGGAACCCAGTGATACCATGGAGATCCTGGTCTTAGGTATGGAT s panTro4.chr19 59627894 426 + 63644993 CAGGAAGGGGGTCGGCTCTCAAGGGCATCTCCGTTCTATTAACTCAGCCCTGGGGGATGATGTGG-GACGCGTGAGCCCCATTTAAGACAGTGTCTCTTTCTCTCCTAGGAGCCCACAGAAAACCCACTCTCTCAGCCCTGCCGAGCCCTGTGGTGACCTCAGGAGAGAACGTGACCATCCAGTGTAGCTCAAGGGTGGGATTTCACAGGTTCATTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAAGGGGCTGTCCCTTGTCCCTGGCCCTGTTCCCTGTGGGTCATGTGACTGCCAGTCACCGGTGGATGTTCAGATGCTATGGGCATTACACAAACATCTCCTGGGTGTGGTCGGAACCCAGCGATACCATGGAGATCCTGGTCTTAGGTATGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56557496 419 + 60714840 CAGGAAGGGGGTCGGCTCTCAGGGGCATCTCCATTCTAATAACTCAGCCCTGGGGGATGATGTGG-GACACGTGAGCCCCATTTAAGACAATGTCTCCTTCTCTCCTAGGAGCCCACAGAAAACCCACTCTCTCAGCCCTGCCGAGCCCTGTGGTGACCTCAGGAGAGAATGTGACCATCCAGTTTAGCTCAAGGGTGGGATTTCACAGGTTCATTTTGATTGAAGATGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAAGGGG-------TTGTCCCTGGCCCTGTTCCCTGTGGGCCGTGTGACCGCCAGTCACCGATGGATGTTCAGATGCTATGGGTATTACAGGAACATCCCCCGGGTGTGGTCGGAAGCCAGTGATACCATGGAGATCCTGGTCTCAGGTACGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103221280 418 - 106955855 CAGGAAGGGGGTCGGCTCTCAAGGGCATCTCTGTTCTAATAACTCAGCCCTGGGGTATGATGTGG-GAGGCGTGAGCCCCATTTAAGACAATGTCTCCCTCTCTCCTAGGAGCCTACAGAACACCCACTCTCTCAGCCCTGCCGAGCCCTGTGGTGGCCTCAGGAGAGAACGGGACCATCCAGTGTAGCTCAAGGGTGGGGTTTCACAGGTTCCTTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGACGCTGGA-CTCACAGGAACCCTCCAAGGGG-------CTGTCCCTGGTCCTGTTCCCTGTGGGCCCCGTGACCGCCAGTCACCGGTGGATGTTCAGATGTTATGGGTATTACACGGACATCCCCTGGGT-TGGTCGGAACCCAGTGATACCACGGAGATCCTGGTCTTAGGTACGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60512799 419 + 64156825 CAGGAAGGAGGTCAGCTCTCAGGGGCATCTTCGTTCTAATAACTCAGCCCTGGGGGATGATGTGG-GAGGCGTGAGTCCCATTTAAGACAGTGTCTCCTTCTTTCCTAGGAGCCTACAGAGAACCCACCCTCTCAGCCTTGCCGAGCCCTGTGGTGACCTCAGGAGAGAACGTGACCATCCAGTGTAGCTCAAGGCTGGGATTTCAGAGGTTCATTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAACGGG-------CTGTTCCTGGCCCTGTTCCCTGTGGGCCCTGTGGCCCCCAGTCACCGGTGGATGTTCAGATGCCATGGATATTACAGGAACATCACCCAGGTGTGGTCGGAACCCAGTGATACCATGGAGATCCTGGTCTCAGGTACAGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55612011 419 + 59248254 CAGGAAGGAGGTCAGTTCTCAGGGGCATCTTCGTTCTAATAACTCAGCCCTGGGGGATGATGTGG-GAGGCGTGAGTCCCGTTTAAGACAGTGTCTCCTTCTTTCCTAGGAGCCTACAGGAAACCCACCCTCTCAGCCCTGCCGAGCCCTGTGGTGACCTCAGGAGAGAACGTGACCATCCAGTGTAGCTCAAGGCTGGGATTTCAGAGGTTCATTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAACGGG-------CTGTTCCTGGCCCTGTTCCCTGTGGGCCCTGTGGCCCCCAGTCACCGGTGGATGTTCAGATGCCATGGATATTACAGGAACATCACCCAGGTGTGGTCGGAACCCAGTGATACCATGGAGATCCTGGTCTCAGGTACAGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47683474 417 + 51301725 CAGGAAGGAGGTCAGCTCTCAGGGGCACCTTCGTTCTAATAACTCAG--ATGGGGGATGATGTGG-GAGGCGTGAGTCCTGTTTAAGACAGTGTCTCCTTCTTTCCTAGGAGCCTACAGGAAACCCACCCTCTCAGCCCTGCCGAGCCCTGTGGTGACCTCAGGAGAGAACGTGACCATCCAGTGTAGCTCAAGGCTGGGATTTCAGAGGTTCATCTTGAttgaggaaggagaaaacaagCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAACGGG-------CTGTTCCTGGCCCTGTTCCCTGTGGGCCCTGTGGCCCCCAGTCACCGGTGGATGTTCAGATGCCATGGATATTACAGGAACATCACCCAGGTGTGGTCGGAACCCAGTGATACCATGGAGATCCTCGTCTCAGGTACAGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47364152 419 + 50890351 CAGGAAGGAGGTCAGCTCTCAGGGGCATCTTCGTTCTAATAACTCAGCCCTGGGGGATGATGTGG-GAGGCGTGAGTCCCGTTTAAGACAGTGCCTCCTTCTTTCCTAGGAGCCTACAGGAAACCCACCCTCTCAGCCCTGCCAAGCCCTGTGGTGACCTCAGGAGAGAACGTCACCATCCAGTGTAGCTCAAGGCTGGGATTTCAAAGATTCATTTTGATTGAGGAAGGAGAAAACAAGCTCTCCTGGATGCTGGA-CTCACAGGAACTCTCCAACGGG-------CTGTTCCTGGCCCTGTTCCCTGTGGGCCCTGTGGCCCCCAGTCACCGGTGGATGTTCAGATGCCATGGATATTACAGGAACATCACCCGGGTGTGGTCGGAACCCAGTGACACCATTGAGATCCTGGTCTCAGGTACAGAC i chlSab2.chr6 I 3 C 0 s calJac3.chr22 45822369 417 + 49145316 CAGGAAGGGGCTCTGCACTCAGGGGCATCTCC-CTCTCACAGCCCAGCCCTGGTG-ATGATGTGG-GAGGTGTGAGCCCCACTTAACATGGTGCCTCCTTCTCTTCTAGGATATTACAGCAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGACCCCAGGAGGAAGCGTGACCCTCCAGTGTAGCTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACTG-TGCCGGAGCTCCCAGCCCCGTACCCGTGGG-------TCGTCCTGGGCCGTCTTCTCTGTGGGCCCTGTGAGCCCGAGTTGCAGGTGGACGTACAGGTGCTATGGTTATGACTCAAGCTCTCCCTATGTGTGGTCTTCACCCAGTGATCTCCTGGAGCTCCTGGTCCCAGGTGAGAAA i calJac3.chr22 C 0 I 64 s canFam3.chr1 19915666 415 - 122678785 CAGGAAGAGGGTCTGGT-TCCCGGGTGTCTCC---CTCACAGCCCAGTTCTGGGG-ATCATGTGGAGCAATCTGAATCCCATTTAACACAGCCCCTCCCCCTCATCTAGGATTGCATGGCAAACCCAGCCTCTCAGCCCTGCCCAGCCCTGTCGTGCCCTCAGGAGGGGACATGACTCTCCAGTGTGG-TAATGGACAGGATTCCACAGGTTCATCCTGATAAAGGAAGTAGAAGGCCAGCCCTCCTGGACCCTAGA-CTCCCAGGGAGCCCCCATTGGG------GGGGGTCCAGGCCCTATTACCTGTGGTTCAGGTAGCCCCCAGCCTCACCTGGAAGTTCAGATGCTATGGTTATTACAGCCACACACCCCACGTGTGGTCAGTCTCCAGTGGCCCCCTGGAGCTGCTTGTCTCAGGTGAGAAA i canFam3.chr1 C 0 C 0 a score=78650.000000 s hg38.chr19_GL949753v2_alt 435695 45 + 796479 GTCTTCCTCCTTGCCCTATTTATTTTTGAGAA-------------------CTTACTCTCACGG s panTro4.chr19 59628320 45 + 63644993 GTCTTCCTCCTTGCCCTATTTATTTTTGAGAA-------------------CTTACTCTCACGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56557915 45 + 60714840 GTCTTCCTCCTTGCCCTATTTATTTTTGAGAA-------------------CTTACTATCAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103221698 45 - 106955855 GTCTTCCTCCTTGCCCTATTTATTTTTGAGAA-------------------CTTACTCTCAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60513218 44 + 64156825 ATCTG-CTCCTTGCCCGATTTATTTTTGAGAA-------------------CTCACTCTCAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55612430 44 + 59248254 ATCTG-CTCCTTGCCTGATTTATTTTTGAGAA-------------------CGCACTCTCAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47683891 44 + 51301725 ATCTG-CTCCTTGCCCGATTTATTTTTGAGAA-------------------CTCACTCTCAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47364571 33 + 50890351 GTCTG-CTCCTTGCCC-----------GAGAA-------------------CTCACTCTCAGGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19916081 64 - 122678785 GTCTGATTTTTTACCATCCATAGTTTGAAGCAAAAGACAGGTAAAGGGATCTCTGCTCCTAGGG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45822786 64 + 49145316 I a score=3586966.000000 s hg38.chr19_GL949753v2_alt 435740 1136 + 796479 -AGCCCCATGTAGGAGGG-TGGAACAAGGGAAGTTTGGGACTCCTGAG--CCCAGAGACACTGAGTGTGAGAGACAGTGAGACCTGCAG-GGCCAGGAGGGGAGAAGGAAGGGGTGTGGGAGGAAC--------CAGCCCTCCTAGTCCCGACTCTTCTTTCCCTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCGTGGCCCCTGGGGAGAATCTGACCCTCCAGTGTGGCTCTGATGTCGGCTATGACAAATTCACTCTGTACAAGGAGGGGGGACATGACCTCGTCCAGGGCTCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGTCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGAGCATCCTGATCGCAGGTGAGGAGCCCAGCAGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGTG-G-GGGTCCTAagggacggagagac--------agacagagacaggggatgggcggggagggggagactcagagaaaacagagacagagacaCTGAGGGTCCCAGGGAGAGGCCTGGGGAGGTGTCAGCTCAGAACGAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCGTGGCAGACCCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACGGGAGCAGTTGGACACTTTCCTTCTGACCAAGGA-GGGGGCAGCCCATCACCCACTGCGTCTGAGATCAGAGCACCAAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACAGCTCACGCAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGCCGCTGACCCTGTCCTCTCTGAGCTCAAA-CCTCAGCTCA-GGCCCTGCCCCCAGGAGAGCTCAGGACGCTAAGGAAAGAGGGGAGTAAAG----GGGGAGGGTCGGCAGGGGAGGGCCCAGCCC s panTro4.chr19 59628365 1130 + 63644993 -ATCCCCATGTAGGAGGG-TGGAACAAGGGAAGTTTGGGACTCCTGAG--CCCAGAGACACTGAGTGTGAGAGACAGTGAGACAGGCAG-GGCCAGGACGGGAGAAGGAAGGGGCGTGGGAGGAAC--------CAGCCCTCCTAGTCCCGACTCTTCTTTCCTTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCGTGGCCCCTGGGGAGAAGCTGACCCTGCAGTGTGGCTCTGATGTCGGCTACGACAAATTCACTCTGTACAAGGAGAGGGGACATGACCTTGTCCAGGGCTCTGGCCGGCAGCCCCAGGCTGGGCTCTTCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACGTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGAACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCACAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGTG-G-GGGTCCCAAGGGACGGAG------------AGACAGAGACAGGGGATGGGCGGGGAGGGGAAGACTCAGAGAAAACAGAGACAGAG--ACTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTCCCTCTCGGTGCAGCCGGGCCGCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACGGGAGCAGCTGGACACTTTCCTTCTGACCAAGGA-GGGGGCAGCCCATCACCCACTGCGTCTGAGATCAGAGCACCAAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCTTACGCAGGGACCTACAGGTGCTACAGCTCACGCAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGCCGCTGACCCTGTCCTCTCTGAGCTCAAA-CCTCAGCTCA-GGCCCTGCCCCCAGGAGAGCTCAGGACGCTAAGGAAAGAAGGGAGTAAAA----GGGGAGGGTCCGCAGGGGAGGGCCCAGCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56557960 1133 + 60714840 -AGCCCCATGTAGGAGGG-TGGAACAAGGGAAGTTTGAGATTCCTGAG--CCCAGAGACACTGAGTGTGAGAGACAGTGAGACCTGCAG-GGCCAGGACGGGGGAAGGAAGGGGTGTGGGAGGAAC--------CAGCCCTCCTAGTCCCGACTCGTCTTTCCCTCCAGGCATGTCTAGGAAGCCCTCTCTCCTGACCCTGCAGGGCCCTGTCGTGGTCCCTGGAGAGAACCTGACCCTGCAGTGTTGCTCTGATTTCGGCTACGACAGATTCGCTTTGTACAAGGAGGGGGGACATGACCTCTTCCAAGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGACGGTCTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACGTCTCCTCTGAGTGGTCGGCCCCCAGTGACCCCCTGAACATCCTGATCTCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCGCCACACAGGCCCAGCCGGGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGTG-G-GGGTCCCAagggagggagagac--------agacagagacaggggatgggcagggagaggaagactcagaaaaaacagagacagag--actgagGGTCCCAGAGAGAGGACTTAGGAGGTCTCAGCTCAGAATAAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGGCAAATCCCTGACAGACCCTCCCTCTCAGTGCAGCCAGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGACCAAGGA-TGGGGCAGCCCATCACCCACTGCGTCTGAGATCAGAGCACCAAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCAGGGACCTACAGGTGCTACAGCTCACGCAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACCCCC-GGAGCTCGTGGTCTCAGATGAGGGCCCTGACCCTGTCCTCTCTGAACTCAAA-CCTCAGCTCA-GGCCCTGCCTCCAGGAGAGCTCAGGACACTAAGGAAAGAGGGGAGTAAAG----AGGGAGGGTCCGCAGGGGAGGGCCCAGCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103221743 1135 - 106955855 -AGCCCCATGTAGGAGGG-TGGAACAAGGGAAGTTAGGGACTCCTGAG--CCCAGAGACACGGAGTGTGAGACACAGTGGGACCTGCAG-GGCCAGGACGGGAGAAGGAAGGGGCGCGGGAGGAAC--------CAGCCCTCCGAGTCCCGACTCTTCTTTCCCTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCATGGTCCCTGGAGAGAACCTGACCCTGCAGTGTGGCTCTGATGTCGGCTACGACAGATTCGCTCTGTACAAGGAGGGGGGACATGACCTCTTCCAGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGGGGCTCCCACGGCGGCCAGTACAGATGCTCCAGTGCACACAACGTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGTTCTGCACAGGCCCTGCC-GGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGT--G-GGGTCCCAAGGGAGGGAGAGAC--------AGACAGAGACAGGGGATGGGCGGGGAGGGGGAAACTCAGAGAAAACAGAGACAGAGAGATTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTGTCAGCTCAGAACAAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTCCCTCTCAGTGCAGCCGGGCCCCACAGTGGCCTCAGGAGAGAATGTGACCCTGCTGTGTCAGTCACGGGGCTGGATGGACACTTTCCTTCTGACCAAGGA-TGGGGCAGCCCATCACCCGCTGCGTCTGAGATCAGAGCACCGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGAGACCTACAGGTGCTTCAGCTCACGCACATTCTTCCCCTACTTGCTGTCTCACTGCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGCCCCTGACCCTGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCGTGCCTCCAGGAGAGCTCAGGACACTAAGGAAAGAGGGGAGTAAAG----GGGGAGGGTCCGCAGGGGAGGGCCCAGCCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60513262 1121 + 64156825 -AGTCCCACGTAGGAGGG-TGGAACAAGGGAAGTTTGGGACTCCTGAG--CCCAGAGAGACTGAGTGTGAGAGACAGTGAGACCTGCA---GCCAGAACGGGAGAAGGAAGGGGTGTGGGAGGAAC--------CAGTCCTCCTAGTCCCAACTCTTGTTTTCCTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCCACAGGGCCCTGTCGTGGCCCCTGGAGAGAATCTGGCCCTGCAGTGTCGCTCTGATGTCGGCTACGACAGATTTGCTCTGTACAAGGAGGGGGAACGTGACCTCCTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTTACCCTGGGCCCTGTGAGGGTGTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCTCAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCAGGATGAGGGATG-G-GGGTCCTAAGGGAGAAAGACAC--------AGAGAGAGACAGGGGATGGGTGGGGAGGGGGAGACTCAGAGAAAACAGAGACAGAGAGACTGAGGGCCCCAGAGAGAGGCCTGGGGAAGTCTCAGCTCAGAACAAGGTGGGACAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTTCCTCTCGGTGCAGCCGGGCCCCACAGTAGCCTCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGACCAAGGA-GGGGGCAGCCCATCCCCCGCTGCGTCTGAGATCAGAGCACCAAGCTCACCAGCACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACAGCTCACACAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGGCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCCTGCCCCCAGCAGAGCTCAGGATGCTAAGGAAAGAGGGGAGTAAAG------------------GGAGAGGGCCCAGCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55612474 1121 + 59248254 -AGTCCCACGTAGGAGGG-TGGAACAAGGGAAGTTTGGGACTCCTGAG--CCCAGAGAGACTGAGTGTGAGAGACAGTGAGACCTGCAG-GGCCAGAACGGGAGAAGGAAGGGGTGTGGGAGGAAC--------CAGTCCTCCTAGTCCCAACTCTTGTTTTCCTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCCGCAGGGCCCTGTCGTGACCCCTGGAGAGACCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTACGACAGATTTGCTCTGTACAAGGAGCAGGGACATGACCTCCTCCAGCGCCCTGGTCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTTACCCTGGGCCCTGTGAGGGTGTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCTCAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGTG-G-GGGTCCTAagggagaaagacac--------agagagagacaggggatgg--ggggagggggagactcagagaaaacagagacagagagactgagggccccagagagagGCCTGGGGAAGTCTCAGCTCAGAACAAGGTGGGACAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTTCCTCTCAGTGCAGCCGGGCCCCACAGTAGCCTCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGACCAGGGA-GGGGGCAGCCCATCACCTGCTGCGTCTGAGATCAGAGCACCGAGCTCAGCAGCACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCACGCGGGGACCTACAAGTGCTACAGCTCACACAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGGCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCCTGCCCCCAGCAGAGCTCAGGATGCTAAGGAAAGAGGGGAGTAAAG------------------GGAGAGGGCCCAGCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47683935 1123 + 51301725 -AGTCCCACGTAGGAGGG-TGGAACAGGGGAAGTTTGGGACTCCTGAG--CCCAGAGAGACTGAGTGTGAGAGGCAGTGAGACCTGCAG-GGCCTGAACGGGAGAAGGAAGGGGTGTGGGAGGAAC--------CAGCCCTCCTAGTCCCAACTCTTGTTTCCCTCCAGGCGGGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCGTGGCCCCTGGAGAGACCCTGACCCTGCAGTGTGGTTCTGATGTCGGCTACGACAGATTCACTCTGTACAAGGAGCAGGGACATGACCTCCTCCAGGGCTCTGGCCAGCAGCACCAGGCTGGGCTCTCCCAGGCCAGCTTCACCCTGGGCCCTGTGAGGGTGTCCCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCGCAGGTGAGGAGCCCAACAGGTTCAGTCAGGGATCCAGGCTCTGCACAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCGGGATgagggatg-g-ggatcctaagggagaaagacac--------agagagagacagggaatgggtggggagggggagactcagagaaaacagagacagagagactgagggccccagagagagGCCTGGGGAAATCTCAGCTCAGAACAAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTTCCTCTCAGTGcagccgggccccacggtggctTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGACCAAGGA-GGAAGCAGTCCATCACCTGCTGCGTCTGAGATCAGAGCACCGAGCTCACCAGCACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACAGCTCACACAGATTCTTCCCCTACCTGCTGTCTCACTCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGGCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCCTGCCCCCAGCAGAGCTCAGGATGCTAAGGAAAGAGGGGAGTAAAG------------------GGAGAGGGCCCAGCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47364604 1121 + 50890351 -AGTCCCACGTAGGAGGG-TGGAACAAGGGAAGTTTGGGACTCCTGAG--CCCAGAGAGACTGAGTGTGAGAGACAGTGAGACCCGCAG-GGCCAGAACGGGAGAAGGAAGGGGCATGGGAGGAAC--------CAGTCCTCCTAGTCCCAACTCTTGTTTTCCTCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCCGCAGGGTCCTGTCGTGGCCCCTGGAGAGAACCTGACCCTGCAGTGTGGCTCTGATGTCGGCTACAACAGATTCGCTCTGTACAAGGAGCAGGGACATGATCTCCTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCGTGGGCCCTGTGAGGGTGTCCCACGCGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCTCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGATCCAGGCTCTGCTCAGGCCCTGCTGGGGGAG-CCCAGGTGGTGATGGCCGGGATGAGGGGTG-G-GGGTCCTAagggagaaagacac----------agagagacaggggatgggtggggagggggagactcagagaaaacagagacagagagaCTGAGGGCCCCAGGGAGAGGCCTGGGGAAGTCTCAGCTCAGAACAAGGTGGGGCAGCCCCTCACCCATCCTTCTTCTCTCCAGGACAGATCCCTGACAGACCCTTCCTCTCAGTGCAGCCGGGCCCCACAGTAGCCTCAGGAAAGAACGTGACCCTGCTGTGTCAGTCACGGAGCCCGATGGACACTTTCCTTCTGACCAAGGA-GGGAGCAGCCCATCACCTGCTGCGTCTGAGATCAGAGCACCGAGCTCACCAGCACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACAGCTCACACAGATTCTTCCCCTACCTGCTGTCTCACCCCAGTGACGCCCTGGAGCTCGTGGTCTCAGGTGAGGGCCCTGACCTTGTCCTCTCTGAGCTCAAAGGCTCAGCTCA-GGCCCTGCCCCCAGCAGAGCTCAGGACGCTAAGGAAAGAGGGGAGTAAAG------------------GGAGAGGGCCCAGCCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45822850 1102 + 49145316 -AGCTCCAGGTGGGACAG-TG-------------TTGGGGTGAGAGGG--CTCAGGGTTCCTGGGCCAGAGACACAGGAAGATCAGCAGTGGTGAGGCTGGGGGAGAGGGAGCATTTGTGGGGAGCCTGAGGGTCGGCTCCTGGAGACCATGACCACCTTTC---CCAGGTGTTTCTGAGAAGCCATCACTCTCAGTGCAGCCGGGTCCTATTGTGGCCCCTGGGGAGACCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGGTTCGCTCTGTACAAGGACTGGGGACCTGACCTCCTCCAGCGCCCTGGCCGGCAGACCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGAGCCCTGTGAGGGTCTCCCACAGGGGCCAGTACAGATGCTCCGGTGCCCACAACATCTCCTCCGAGTGGTCAGCCCCCAGTGACCCCCTGGACATCCTGATCTCAGGTGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCTGCACAGGCCCTGCTGGGGGAG-CCCAAGTGGTGAGGGGT-GGATGAGGGGTG-GCGGGTCCCAGGGGAGGAAG------------------AGACAGGCAATGGGTGGGAAGGGGGAGACTCAG--AAAACAGAGACAGAG--ACTGAGGGTCCCAGAGAGAGGCCTGGGGAGGTCTCAGCTCAGAACAAGGCGGGGCAGCCCCTCACCGATCCTTGTTCTCTCCAGGACAGATCCCTGACAGTCCCTCCCTCTCAGTGCAGCCGGGCCCCACAGTGGCCTCAGGAGAGGATGTGACCCTGCTGTGTCAGTCACAGGGGTGGATGCACACTTTCCTTCTGACCAAGGA-GGGAGCAGCTGATGCCCCCGTGCGTCTAAGATCAAAGTACCAATCTGATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCTCTACCCGCTGTCTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGTGAGGGCCCTGACCCGGTCCTCTCTG-------------AGCTCA-GGCCCTGCC-CCAGGAGATCTCTGGGCT----GGGATGGAGGGAGGAGGGTCTGTAGGAGGCTCAGCCAGAGGGGCCTCAGCCC i calJac3.chr22 I 64 C 0 s canFam3.chr1 19916145 1060 - 122678785 GATCATCAGATGAGAGGGTTGGGAGAGGGGACCACCAGGACTCACAGGTCCCCAGGGTCAGAGAGAGTGAGAGAGAGTGAGACCTG--G-GGTCAGGACAGGCAAATGGAAG--TTTGGGAAGAAT--------CAGCCCCTACAA-CCCATGGCTGATCTTCTCCCCAGTGTGTCATGGAAGCCCTTGCTCCTGACCCAGGAGGGCCCTTTTGTGACCTCTGGACAGAGATTGACCCTCCAGTGTCTTTCTGATGTCCAGTATGACAGATTTGCTCTATCCAAGGAA-GGGCACGTGACCTTCTTCAGCATCATGGCCGGCAGCTTCAGGCTGGGATATCTGGGGCAGATGTCCCTCTGGGCCCAGTGAGATCCTTCCATGGGGGCCGGTACACATGCTAAGGTGGACACAACCTCTCCTCCCAGTGAT-GGGCCCCAATAACCCCTTGGACATCCTAATCACAGGCGAAGGGTC--ACGGGTGCAGGCAGGACCCCAGACTTTCACAGGGCCCTGACAGGGGAGCCCCAGGTGATGGTGTC---AACCAGGGATGTG-GGGTCCCCAGGGAAGgagagacagagagagagagagagaCAGGGGATGG---GGATGGGAAAGACTCAGAGGACAC--AGACAGA-----------------------------------CTCAGATCAGAACAAGG------------------GCCCTTCCTCTCTCTAGGACAGCTCCCCTACACACCCTCCCTCTGGGTGCAGCCAGGACCTATGGTGGCCCCAGGAGAGAATGTGACCCTTTT------GTCACTGAGCTCTGTGGACACTTTCCTACTGTCCAAGGAGGGGGGCAGCTGATCCCCCTCTGCATCTTAGATCAAAGTACCGAGCTGGGCTGTAT--GGCTGAATTCTCCTTGAGTCCTGTGACCTCATCCCATGGGGGGACCTACAGGTGCTATGGCTCACTCAACACCTCCCTGTACCTGTTGTCATAGCCCAGTGTCCCTGTGAAGTTCCTGGTC-----------CCCTGTCCCTGTCCCTTCCTTGTGCCAACTTTGTCCTCAGGGCCCTGTGCCCACAAGAACGCCAG--GCTGGGATGGTAGAGGAATTCTG----AGGGAGCTTCACCAGAG--GGGTCCACCCC i canFam3.chr1 C 0 n 0 a score=22976.000000 s hg38.chr19_GL949753v2_alt 436876 9 + 796479 ATGAGAGGG s panTro4.chr19 59629495 9 + 63644993 ATGAGAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559093 9 + 60714840 ATGAGAGGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103222878 9 - 106955855 ATGGGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60514383 9 + 64156825 ATAGGAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55613595 9 + 59248254 ATAAGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685058 9 + 51301725 ATAAGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47365725 9 + 50890351 ATAAGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45823952 8 + 49145316 -TGAGAGGG i calJac3.chr22 C 0 T 28038 s canFam3.chr1 102958725 7 + 122678785 ATCAGGA-- i canFam3.chr1 T 13538 C 0 a score=396208.000000 s hg38.chr19_GL949753v2_alt 436885 158 + 796479 TGGAAATAGTCAGGGACC---TCCTAATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGGCTGAAATGAGA--TATGGAGAAACCTTGGAGGAATCATGCTTAGGCTGAGGGTAGAAGATGGAGGCGCCACCCACTCCCCACCTG s panTro4.chr19 59629504 158 + 63644993 TGGAAATAGTCAGGGACC---TCCTAATCATGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGGCTGAAATGAGA--TATGGAGAAACCTTGGAGGAATCATGCTTAGACTGAGGGTAGAAGATGGAGGCCCCACCCACTCCCCACCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559102 158 + 60714840 TGGAAATAGTCAGGGACC---TCCTAATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGGCTGAAATGGGA--TATGGAGGAACCTGGGAGGAATCATGCTTAGACTGAGGGTAGAGGATGGAGGCCCCACTCACTCCCCACCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103222887 158 - 106955855 TGGAAATAGTCAGAGACC---TCCTGATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGTCTGAAAGGAGA--TATGGAGGCGCCTGGGGGGAATCATGCTTAGACTGAGGGTAGAAGATGGAGGCCCCACCCACTCCCCACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60514392 158 + 64156825 TGGAAATTGTCAGGGACC---TCCTAATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGACTGAAATGAGA--TACGGAGGAACCTTGGAGGAATCATACTTAGACTGAGGATAGAAGATGGAGGCTCCACCCACTCCCCACCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55613604 158 + 59248254 TGGAAATTGTCAGGGACC---TCCTAATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGACTGAAATGAGA--TACGGAGGAACCTTGGAGGAATCATACTTAGACTGAGGATAGAAGATGGAGGCTCCACCCACTCCCCACCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685067 158 + 51301725 TGGAAATTGTCAGGGACC---TCCTAATCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGACTGAAATGAGA--TACGGAGGAACCTGGGAGGAATCATACTTAGACTGAGGATAGAAGATGGAGGCTCCACCCACTCCCCACCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47365734 158 + 50890351 TGGAAATTGTCAGGGACC---TCCTAAGCCTGGGCT-CCCACCCCAGAGACCTCAGATGGGGCTAA---AGGCCAGGGAGGACTGAAATGAGA--TATGGAGGAACCTCGGAGGAATCATACTTAGACTGAGGATAGAAGATGGAGGCTCCACCCACTCCCCACCTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958732 161 + 122678785 ATAAAAAAAACAGAGTCCATGCCATGTTCATGTCTTACCTACACCAGAGG----AAAAGAGGCAGAGCCAGGCGAGTGGGGAGGAGACTGAAGACTATAAAGGAA-CTGTGAGGAGGTACG-GTGGGGTGAGGAGAACAGAGGGAGCCACCACAGCCCCACAGCCTG i canFam3.chr1 C 0 N 0 e calJac3.chr22 45823960 28038 + 49145316 T a score=1180177.000000 s hg38.chr19_GL949753v2_alt 437043 505 + 796479 GGC------------TCCCCTGGCGGCCCCAAAATACTCAGTGCATACCTGAGACGAAGGGGAGATCATGCACCTGCTCACTGCAG------CAATGCAGGCAAATTATTCAA---CAGCAAACCTCGTGTGCAATTCCTTTCTGTCCTTTATTTTT---TATGTCCACATATCTA--GTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGTTAGGTAGCGTTAT--GATGTAAAATAACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---CATTAATAATGTCTT------TTT-------ATCCAATACATTTA---------AAATTAAACTTTATAC---------AGTT-----AGCAGATGCTTGAAGTTGTATTCATAAAAATTGT-------GGACATTGTGAATTTTAAGCAT---------TGTTTTACTACTTGAATA-ATTTGAAAGTCTTTGA-----------------------------------------------------TTCCTTT----CTATTTTCTAAAATT-----------AGTTACGTATGGATGAGAAAGCTATTGGTTTGGG s panTro4.chr19 59629662 504 + 63644993 GGC------------TCCCCTGGCGGCCCCAAAATACTCAGTGCATACCTGAGACGAAGGGGAGATCGTGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACTTCGTGTGCAATTCCTTTCTGTCCTTTATTTTT---TATGTCCACATATCTA--GTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGTTAGGTAGCGTTAT--GATGTAAAATAACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---CATTAATAATGTCTT------TTT-------ATCCGATACATTTA---------AAATTAAACTTTATAC---------ACTT-----TGCAGATGCTTGAAGTTGTATTCATAAAAATTGT-------GGACATTGTGAATTTTAAGCAT---------TGTTTTACTACTTGAATA-ATTTGAAAGTCTTTGA-----------------------------------------------------TTCCTCT----CTATTTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGCTATTGGTTTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559260 511 + 60714840 GGC------------TCCCCTGGTGACCCCAAAATACTCAGTGCATACCTGAGACGAA-GGGAGATCATGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACCTCGTGTGCAATTCCTTTCTGTCTGGTGTCCCTAGATAGAAACACCTATCTA--GTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGTAATGCTGGCATTTATAATTTGCACATTTAATTTGTTAGGTAGCGTTAT--GATATAAAATAACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---CATTAATAATGTCTT------TTT-------ATCCAATACATTTA---------AAATTAAACTTTATAC---------ACTTATATCAGCAGATGCTTGAAGTTGTATTCATAAAAATTGT-------GGACATTGTGAATTTTAAGCAT---------TGTTTTACTACTTGAATA-ATTTGAAAGTCTTTGA-----------------------------------------------------TTCCTTT----CTATTTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGCTATTGGTTTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103223045 505 - 106955855 GGC------------TCCCCTGGCGACCCCGTAATACTCAGTGCATACCTGAGATGAGGGGGAGATCGTGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAG---CAGCAAACCTCACGTGCAATGCCTTTCTGTCCTTTGTTTTT---TATGTCCACCTATCTA--GTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGTTAGGTAGCGTTAT--GATGTAAAATAACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---CATTAATAATGTC--------TTT-------ATCCAATACATTTA---------AAATTAAACTTTATAC---------ACAT--ATCAGCAGACGCTTGAAGTTGTATTCATAAAAATTGT-------GGACACTGTGAATTTTAAGCAT---------TGTTTTACTACTTGAATA-ATTTGAAAGTCTTTGA-----------------------------------------------------TTCCTTT----CTATCTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGCTATTGGTTTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60514550 511 + 64156825 GGC------------TCCCCCAGCGGCCCCGTAACACTCAGTGCATACCTGAGACTAAGGGGAGATTGTGCATCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACCTCGTGCGCAATTCCTTTCTGTCCTTTATTTTT---TACGTCCACGTATCTATTGTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGGTAGGTAGCGTTAT--GATGTAAAATGACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---TATTAATAATGTCTG------TTT-------ATCCAATACATTTA---------AAATTAAACTTTATAC---------ATTTATATCAGCAGGCTTTTGAAGTTATATTCATAACAACTGT-------GGACATTGTGAATTTTAAGGAT---------TGTTTTACTACTTGAATA-ATTTGAAAGGCTTTGA-----------------------------------------------------TTCCTTT----CTATCTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGTTCTTGGTTTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55613762 511 + 59248254 GGC------------TCCCCCAGCGGCCCCGTAACACTCAGTGCATACCTGAGACTAAGGGGAGACTGTGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACCTCGTGCGCAATTCCTTTCTGTCCTTTATTTTT---TACGTCCACGTGTCTATTGTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGGTAGGTAGCGTTAT--GATGTAAAATGACT----GTGTTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---TATTAATAATGTCTG------TTT-------ATCCAATACATTTA---------AAATTAAACTTTATAC---------ATTTATATCAGCAGGCTTTTGAAGTTATATTCATAGCAACTGT-------GGACATTGTGAATTTTAAGGAT---------TGTTTTACTACTTGAATA-ATTTGAAAGGCTTTGA-----------------------------------------------------TTCCTTT----CTATCTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGTTCTTGGTTTGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685225 511 + 51301725 GGC------------TCCCCCAGCGGCCCCGTAACACTCAGTGCATACCTGAGACTAAGGGGAGATCGTGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACCTCATGCGCAATTCCTTtctgtcctttattttt---tatgtccaCGTATctattgtttctctttctgtttctgaagATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGGTAGGTAGCGTTAT--GATGTAAAATGACT----GTGCTCTGATTTTCTTTGGGATTAAATTTAATATGTGCATTCATGATGGAGAATAACTTCT---TATTAATAATGTCTG------TTT-------Atccaatacattta---------aaattaaactttatac---------aTTTATATCAGCAGGCTTTTGAAGTTATATTCATAACAACTGT-------GGACATTGTGAATTTTAAGGAT---------TGTTTTACTACTTGAATA-ATTTGAAAGGCTTTGA-----------------------------------------------------TTCCTTT----CTATCTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGTTCTTGGTTTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47365892 511 + 50890351 GGC------------TCCCCCGGCGGCCCCGGAACACTCAGTGCATACCTGAGACTAAGGGGCGATTGTGCACCTGCTCACTGCAG------CAATGCAGGCAAA-TATTCAA---CAGCAAACCTCGTGCGCAATTCCTTTCTGTCCTTTATTTTT---TATGTCCACGTATCTATTGTTTCTCTTTCTGTTTCTGAAGATTTC-AAAGCAATGCTGGCATTTATAATTTACACATTTAATTTGGTAGGTAGCGTTAT--GATGTAAAGTGACT----GTGCTCTGATTTTCTTTGGGATTAAATTAAATATGTGCATTCATGATGGAGAATAACTTCT---TATGAATAATGTCTG------TTT-------ATCCAACACATTTA---------AAATTAAACTGTATAC---------ATTTATATCAGCAGGCTTTTGAAGTTATATTCATAACAACTGT-------GGACATTGTGAATTTTAAGGAT---------TGTTTTACTACTTGAATA-ATTTGAAAGGCTTTGA-----------------------------------------------------TTCCTTT----CTATCTTCTAAAATT-----------AGTTAAGTATAGATGAGAAAGTTCTTGGTTTGAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102736230 637 + 122678785 GGCACTTCTCTGCTGCCCCCTGGGCCCCCCATGCCCCTCGGTCCCCACCTGAGCCTGAGGAGGGGCCGTGC-CTGGCTCACAGGAGTCTCTCCAGGGTTGCTGAA-CCCTGAATCCCTGTGAACTTGGTGTGCACT-----------CTGCATTGTG---TGTGGAAACTTGTCCAGCATCCCTGTGCCTGCTTCTCACACCATCTAGAGCAACCCCTGCACACATAA-TGACAGATGTGACTCATGTGACAGGGATGTCAGACTCAGAAACACTCATCCTTCTCCTGTGTCCATTGGGGTTAGATTAGATTCACATGATCCTTGTGGGGAAGACCACCTGGGAATTACCAA-GTCTGAGCCCATTTCAAATGAGTCTAatttatctatctttctatgaatctatctatccacctatctTAAACTTTTGATAGCAAAAGTTT----TTGCTATCAAAAAAAGTTTTTTGATAGTGCATTATTGATTTCTGGTATTAAACTCAGTGATTCTTCACTTATATGCACTTCAGAGCCTTTGAACTTTATTCATAACAGTGATGTCAATTCTTAGCTTGTCTGAAGAACTGCTCACCTACTTTAATACCATATTCTTAAGTTGTCTGAATAAAAGTTA-GTATGTCTAAGAGAGCTC--AGTCTGGG i canFam3.chr1 N 0 N 0 e calJac3.chr22 45823960 28038 + 49145316 T a score=64455.000000 s hg38.chr19_GL949753v2_alt 437548 25 + 796479 TATGCTAATTTTAGTTCCTATTAAC s panTro4.chr19 59630166 25 + 63644993 TATGCTAATTTTAGTTCCTATTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559771 25 + 60714840 TATGCTAATTTTACTTCCTATTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103223550 25 - 106955855 TATGCTGATTTTACTTCCTATTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60515061 25 + 64156825 TATGCTAATTTTAGTTCCCATTAAC i rheMac3.chr19 C 0 I 680 s macFas5.chr19 55614273 25 + 59248254 TATGCTAATTTTAGTTCCCATTAAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685736 25 + 51301725 TATGCTGATTTTATTTCCCATTAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47366403 25 + 50890351 TATGCTAATTTTAGTTCCCATTAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102948655 23 + 122678785 TATATTCATTTTA--TTCTATTAAC i canFam3.chr1 N 0 C 0 e calJac3.chr22 45823960 28038 + 49145316 T a score=270166.000000 s hg38.chr19_GL949753v2_alt 437573 144 + 796479 TTACCACAGACACACTCCCTTTCAATCCTTTCCGAAATGATCTCTTCTGATTTATTGATAATAATTACATTAACCACAAGAAAATGGAGGACAAACTTGTTTGTTTCTAAATTATATAATACTCTTCTC----ACTTCAAatatatat s panTro4.chr19 59630191 144 + 63644993 TTACCACAGACACACTCCCTTTCAATCCTTTCTGAAATGATCTCTTCTGATTTATTGATAATAATTACATTAACCGCAAGAAAATGGAGGACAAACTTGTTTGTTTATAAATTATATAATACTCTTCTC----ACTTCAAatatatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559796 144 + 60714840 TTACCACAGACACACTCCTTTTCAATCCTTTCTGAAATGATCTCTTTTGATTTATTGATAATAATTACATTAACCGCAAGAAAATGGAGGACAAACTTGTTTGTTTCTAAATTATATAATACTCTTCTC----ACTTCAAATATATAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103223575 140 - 106955855 TTACCACAGACACACTCCCTTTCAATCCTTTCCCAAATGATCTCTTCTGATTTATTGATAATAATTACATTAACCGCAAGAAAATGGAGGACGAAC----TTGTTTCTAAATTTTATAATACTCTTCTC----ACTTCAAatatatat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55614298 140 + 59248254 TTACCCCTGACACACTCCCTTTCAATCCTTTCCCAAATGATCTCTTCTGATTTATTGATAATAATTACATTAACCACAAGAAAATGGAGGACAAAC----TTGTTTCTAAATTTTATGATACTCTTCTC----ACTTCAAATTTGTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685761 139 + 51301725 TTA-CCCTGACACACTCCCTTTCAATCCTTTCCCAAATGATCTCTTCTGATTTATTGCTAATAATTACATTAACCACAAGAAAATGGAGGACAAAc----ttgtttctaaattttataatacTCTTCTC----Acttcaaatatgtat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47366428 139 + 50890351 TTA-CCCCGACACACACCCTTTCAATCCTTTCCCAAATGATCTCTTCTGATTTATTGATAATAATTACATTAACCACAAGAAAATGGAGGACAAAC----TTGTTTCTAAATTTTATAATACTCTTCTC----ACTTCAAATATGTAT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102948678 147 + 122678785 TTAGTTTTGATTCTCCACCTTCCCATTGCTTTGCAACTGATCTCCTTTAATTTACTGATAATCATTATATCAACTGCAAAAACATTGA-AACTTACCTGTTTATTTCTAGATTATGCACTAGTCTTATTTAAGGCAAAAAATATATAT i canFam3.chr1 C 0 I 2628 e calJac3.chr22 45823960 28038 + 49145316 T e rheMac3.chr19 60515086 680 + 64156825 I a score=256034.000000 s hg38.chr19_GL949753v2_alt 437717 169 + 796479 gtatgtgtttatatata-ctcacacactattatatatcttataatatatattatgtattatatatttatatat------acactatta------tatatct-----tatatattatgtattatatatttatatatacccacacattattatatcttataatatatattatgtattatatatttatat s panTro4.chr19 59630335 167 + 63644993 gtatgtgtttatatata-ctcacacactattatatatcttataatatata--atgtattatatatttatatat------acactatta------tatatct-----tatatattatgtattatatatttatatatacccacacattattatatcttataatatatattatgtattatatatttatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56559940 171 + 60714840 GTATGTGTTTATATATA-CTCACACACTATtatatatattataatatatattatgtattatatatttatatat----acacactatta------tatatct-----tatatattatgtattatatatttgtatatacccacacactattatatcttataatatatattatgtattatatatttatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103223715 175 - 106955855 gtatgtgtttatatata-cctacacactattatatatcttgtaacgtatattatgtattatatatttatatatacccacacactactatcttattacattt-----tatgtattatatattatatatttatatatacaca------attatatatcttattgtatattgtgtattatatatttatgt i nomLeu3.chr10 C 0 I 4 s macFas5.chr19 55614438 181 + 59248254 GTATGTGTTTATACATACCCCACACACCATtatctatcttataatgtatactatgtattatatatttatatatacctacacactatta------tctatcctataatatatattatgtattatatatttatatatacccacacactattatctatcttattatgcactgtgtattatatatttatgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47685900 181 + 51301725 gtatgtgtttatacataCCCCACACACCattatctatcttataatgtatactatgtattatatatttatatatacctacacactatta------tctatcctataatatatattatgtattatatatttatatatacccacacactattatctatcttattatacactgtgtattatatatttatgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47366567 181 + 50890351 GTATGTGTTTGTACATACCCCACACACCattatctatcttataatgtatactatgtattatatatttatatatacctacacactatta------tctatcctataatatatattatgtattatatatttatatatacccacacactattatctatcttaatatacactgtgtattatatatttatgt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102948825 2628 + 122678785 I e calJac3.chr22 45823960 28038 + 49145316 T e rheMac3.chr19 60515086 680 + 64156825 I a score=-1515.000000 s hg38.chr19_GL949753v2_alt 437886 3 + 796479 a--------------------ta s ponAbe2.chr19 56560111 3 + 60714840 a--------------------ta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103223894 3 - 106955855 a--------------------ca i nomLeu3.chr10 I 4 C 0 s macFas5.chr19 55614619 23 + 59248254 atacacaattgtatatcttatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47686081 3 + 51301725 a--------------------ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47366748 3 + 50890351 a--------------------ta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102948825 2628 + 122678785 I e calJac3.chr22 45823960 28038 + 49145316 T e rheMac3.chr19 60515086 680 + 64156825 I e panTro4.chr19 59630502 0 + 63644993 C a score=19342.000000 s hg38.chr19_GL949753v2_alt 437889 53 + 796479 cccacacatt----at--tatatct--------------------tataatatatattatgtattatatatttatata-t s nomLeu3.chr10 103223897 55 - 106955855 cccacacact----attatatatct--------------------tataatatatattatgtattgtatatttatata-t i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 55614642 73 + 59248254 ----tatattttgtattatatatttatgtatatacacccacacagtat--tatatatcttataatatata-ttatgcatt i macFas5.chr19 C 0 I 10 s papAnu2.chr19 47686084 47 + 51301725 ----caca------attatatatct--------------------tat--tatatattttgtattatatatttatgta-t i papAnu2.chr19 C 0 I 10 s chlSab2.chr6 47366751 47 + 50890351 ----caca------attgtatatct--------------------tat--tatatattatgtattatatatttatgta-t i chlSab2.chr6 C 0 I 934 e canFam3.chr1 102948825 2628 + 122678785 I e ponAbe2.chr19 56560114 0 + 60714840 C e calJac3.chr22 45823960 28038 + 49145316 T e rheMac3.chr19 60515086 680 + 64156825 I e panTro4.chr19 59630502 0 + 63644993 C a score=64931.000000 s hg38.chr19_GL949753v2_alt 437942 339 + 796479 gcactattatatatcttata-----tgttatgtattatatatttatattacccacacattattatatcttataatatatattatgtattatatatttatatatacacacac---t-----att-atatatcttattatatattatgtactatatatttatatat-------------actattatatatcttat------------aatatataat--gtattatata-------------tttatatat---acacacactat-tat---------atatc---ttatatatt-----------atgtattat-------atatttatatatacatactattatatatcttataatatattatgtattatatatttat-atatatacactattatatatcttat---tatatattatatatttatatatg s nomLeu3.chr10 103223954 333 - 106955855 acactattatatatcttata-----tatcatgtattatatatttatat-----atacattattata---tatcttatatatcatgtatt-tatatttatatatacacaca----------att-atatatcttattatatattatgtattacatatttatatatataccc---acacactattatatatcttat------------aatatatattaggtattatata-------------tttttatat-----atacactat-tat---------atatcttattatatatt-----------acatattat-------atgtatatatacacacactattatacatctt---atatataatgtgttatgtatttat-atatacacac----atatatctta----tatatattatatatttatatata i nomLeu3.chr10 I 2 C 0 s macFas5.chr19 55614725 360 + 59248254 acactattatatatcttatg-----tattatttattatatattt---------atatattaacata---tatgttataca-taaata-tatatatcaatatatttat-tatatat-----atcaatatatttatatataacatata---aatatataaatatatttatatacaatatataaatacataaagtat---------------atatatt-tatattatata-------------ttaatatataatatataaaatatataa---------atatt---tgatatattatattaaataaatatatcattaatataataaatatatttatatattaataaatatatt-tgatatattatattaaataaatatatgatatttatat-attatatattatatataaatatattacatatttatatatg i macFas5.chr19 I 10 I 9 s papAnu2.chr19 47686141 408 + 51301725 acagtattatatatcttatgatatatattatgcattacatatat---------acacactattata---tatcttatgtattatgtattatatatttatatattaacatatatgttatacataaatatatattaatataatgtatatataacatataaatatataaatat----tatatttatatacaatatataaatacataaagtatatatatt-tatattatatatttatattacatattaatatataatatataaaatatataaatatttgatatatt---tgatatattatattaaataaatatatcattaatataatgaatatatttatatattaataaacatatt-tgatatattatattaaataaatatat-atatttatat-attatatattatatataaatatattacatatttatatata i papAnu2.chr19 I 10 I 9 e canFam3.chr1 102948825 2628 + 122678785 I e ponAbe2.chr19 56560114 0 + 60714840 C e calJac3.chr22 45823960 28038 + 49145316 T e chlSab2.chr6 47366798 934 + 50890351 I e rheMac3.chr19 60515086 680 + 64156825 I e panTro4.chr19 59630502 0 + 63644993 C a score=14969.000000 s hg38.chr19_GL949753v2_alt 438281 37 + 796479 cacacactattacatatcttattatatatt------------tatatgt s ponAbe2.chr19 56560114 49 + 60714840 cacacactattatatatcttattatatattatctattatatatttatat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103224287 47 - 106955855 cacacactattatatatcttataatatattatgtattatatatttat-- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55615094 35 + 59248254 aacacactattatatattgtattatatatt------------tagag-- i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47686558 33 + 51301725 aacacac--ttatatattgtattatatatt------------tagag-- i papAnu2.chr19 I 9 C 0 e canFam3.chr1 102948825 2628 + 122678785 I e calJac3.chr22 45823960 28038 + 49145316 T e chlSab2.chr6 47366798 934 + 50890351 I e rheMac3.chr19 60515086 680 + 64156825 I e panTro4.chr19 59630502 0 + 63644993 C a score=334497.000000 s hg38.chr19_GL949753v2_alt 438318 433 + 796479 atacacacactattatatatcttat--tatatattatgtactatatatttatatat------actattatatatcttataatatataatgtattatatatttatatatacacacactattatatatctt---atatattatgtattatatatttatatatacata--ctattatatatcttataatatattatgtattatatatttatatat--acacactattatatatcttattatatattat-------atatttatatatgtacacactattacatatcttattatatatt------------tatatgtatacacacactattatatatc------------ttatatattatatatttatatatactcacac-----tatatcttataatacatattatgcat-acacatatgcata-atacatattatc---tat------acacatatgcataatacatattatgtatacacatatgcata-------acacat s panTro4.chr19 59630502 432 + 63644993 atacacacactattatatatcttataatatatattatgtattatatatttatatat------actattatatatcttataatatataatgtattatatatttatata--cacacactattatatatctt---atatattatgtattatatatttatatatacata--ctattatatatcttataatatataatgtattatatatttatatat--acacactattatatatcttattatatattatgtattatatatttatatatacacacactattacatatcttattatatatt------------tatatgtatacacacactattatatatc------------ttatatattatatat--------aCTCACAC-----TATATCTTATAatacatattatgtat-acacatatacata-atacatattgtg---tat------acacatatgcataatacatattatgtatacacatatgcata-------acacat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56560163 445 + 60714840 atacacacactattatatatcttat--tatatattatgtattatatatttatatatacacacactattacatatcttattatatat------ttata----tgtata--cacacactattatatatct-----tacattatgtattatatatttgtatatacaca--ctattatatatcttattatatattatgtattatatatttatatatacacacactattatatatcttattatatattatgtattatatatttatatatacacacactattacatattttattacatatt------------tatatgtatacatacactattatatatcttat--tatatattatgtattatatatttatatataCTCACACTAT--TATATCTTATAatacatattatgcat-acacatatgcata-atacatac-----------------cacatat-tataatacatgttatgcatacacataagcaaatttgtatttacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103224334 400 - 106955855 atatacacactgttatctatct-----tatatataatgtgttatatatttatatat--acacacaattatatatcttataatatataatgtgttatatatttatatc--tacacactattatatatctt---aaatatattatgttatatatttatatatacaca----atgatatatctt---atatattatgtattagatatttatgtatgcacactgtattatatatcttattatatattatgtattatatatttatatatgcaca----attatatatcttattacatatt------------tatatgtatacacacagtaatatataat-------atattttatgtattatatatttatatatacacacgctatcatgtatcttataatacatattatgcat----------------------------------------tatatat------------ttacatatacacactattata-------tctca- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55615129 461 + 59248254 atacacatactatcatacatcttat--tatatattatgcatcatgtatttatatat--gcacactattatatatc-----atatattatgtgttatatatttatata--tacacactattgtgtatcttataatatataatgtattatatatttagatatacacacactgttatatgtcttattatattttatgtattatatatttagatat--atacactattatatatcttattacatatt------------tatatgtatacacacactattatatatgttattatatattatgtattatatatttatttatacacacactattatatatcttataatacatactatgcattttatatttacatgcacacatatta---tatatctcataatatatattatgtattacacatttgtatatacacacactatgatatatcttctaatacataagcattatgtat-ttacatacacacactattata-------t----- i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47686591 461 + 51301725 atacacatactatcatacatcttat--tatatattatgcatcatgtatttatatat--acacactattatatatc-----atatattatgtgttatatatttatata--tacacactattttatatcttataatacataatgtattatatatttagatatacacacactgttatatgtcttattgtattttatgtattatatatttagatat--atacactgttatatatcttattacatatt------------tatatgtatacacacactattatatatgttattatatattatgtattatatatttatttatacacacactattacatatcttataatacatattatgcattgtatatttacatgcacacatatta---tatatctcataatatatattatgtattacatatttgtatatacacacactattatatatcttctaatacataagcattatatat-ttacatacacacactattata-------t----- i papAnu2.chr19 C 0 I 4 e canFam3.chr1 102948825 2628 + 122678785 I e calJac3.chr22 45823960 28038 + 49145316 T e chlSab2.chr6 47366798 934 + 50890351 I e rheMac3.chr19 60515086 680 + 64156825 I a score=119133.000000 s hg38.chr19_GL949753v2_alt 438751 64 + 796479 attatgtatacacacatatttacacctatgcatatatgtatgtatgtatGCGAATGTACCTCTG s panTro4.chr19 59630934 64 + 63644993 attatgtatacacacatatttacacctatgcatatatgtatgcatgtaTGCGAATGTACCTCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56560608 64 + 60714840 attatgtatacacacatatttatacctatgcatatatgtatgtatgtaTGCAAATGTACCTGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103224734 64 - 106955855 attatgtatacacacatatttacacctatgcatatatgtatataCGTATGCGAATGTACCTCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60515766 54 + 64156825 attatgtatatacacatatttattcctgtgcatatatgtatgtat----------GCACCTCTG i rheMac3.chr19 I 680 C 0 s macFas5.chr19 55615594 54 + 59248254 attatgtatatacacatatttattcctgtgcatatatgtatgtat----------GCACCTCTG i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47687056 54 + 51301725 attatgtatatacacatatttattcctgtgcatatatgtatgtac----------gcACCTCTG i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47367732 54 + 50890351 attatgtatatacacatatttattcctgtgcatatatgtatgtaC----------GCACCTCTG i chlSab2.chr6 I 934 C 0 e canFam3.chr1 102948825 2628 + 122678785 I e calJac3.chr22 45823960 28038 + 49145316 T a score=314096.000000 s hg38.chr19_GL949753v2_alt 438815 132 + 796479 CCACAGCAGGGAAAGGTTCTATCACACAACTACAGAGC--AGTTAGGAGAAGTGTAGACA--CAAAGGAATGCAGCAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACCT--CCCCCTTTTTTGG s panTro4.chr19 59630998 132 + 63644993 CCGCAGCAGGGAAAGGTTCTATCACACAACTACAGAAC--AGTTAGGAGAAGTGTAGACA--CAAAGGAATGCAGCAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACCT--CCCCCTTTTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56560672 132 + 60714840 CCGCAGCAGGGAAAGTTTCTATCACATAACTACAGAAC--AGTTAGGAGAAGTGTAGACA--CAAAGGAATGCAGCAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACCT--CCTCCTCTTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103224798 133 - 106955855 CGACAGCAGGGAAAGGGTCTATCGCATAGCTACGGAAC--AGTTATGACAAGTGTAGACA--CAAAGGAATGCAGCAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACCTC-CCCCCTTTTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60515820 134 + 64156825 CCGCATCAGGAAAAGGTTCTATCACATAACTACAGAAC--AGTTAGGAGAAATGTAGACA--CAAAGGAATGCAGTAACTGAGGGACATGTTGACTTAAGTCTCTTCAACTCCTCACACACCTCCCCTCTTTTTTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55615648 134 + 59248254 CCGCATCAGGAAAAGGTTCTATCACATAACTACAGAAC--AGTTAGGAGAAATGTAGACA--CAAAGGAATGCAGTAACTGAGGGACATGTTGACTTAAGTCTCTTCAACTCCTCACACACCTCCCCTCTTTTTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47687110 134 + 51301725 CCGCATCAGGAAAAGGTCCTATCACATAACTACGGAAC--AGTTAGGAGAAGTGTAGACA--CAAAGGAATGCAGAAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACGTCTCCCCtttttttGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47367786 134 + 50890351 CCGCATCAGGAAAAGGTTCTATCACATAACTACAGAAC--AGTTAGGAGAAATGTAGACA--CAAAGGAATGCAGAAACTGAGGGACATGTTGGCTTAAGTCTCTTCAACTCCTCACACACCTCCCCCCTTTTTTTGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102951453 127 + 122678785 CTATAGCAGAGAAAGGGTTCATTACA-GTCTATAAAGTTATATCATGAGAAATGCAGGAAGGTACAAGAACAC-TCAATCAGGGGACA----AATTTGAGTCTCATCAGGACCT----CATTTTTCCTCATGGTTTT- i canFam3.chr1 I 2628 C 0 e calJac3.chr22 45823960 28038 + 49145316 T a score=1472510.000000 s hg38.chr19_GL949753v2_alt 438947 436 + 796479 TTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCATCGCAAAACAAGACAGACTCCAAGACTGGTGTGTA--AGGAGATGCTCTCGGTTATGGGGCTGGCACAGAGGGTCAGGTCCTGTGAAGGGGAGGTGGGTGCCCTGGGTGGACATCCAGGGGTCCCGGGTGATGTTGATCTGCCCTGACCTCTGAGACCTCTTGGTCCACCATCCCCAGCCTCACACCCCCAGGATTACACAGTGGAGAATCTCATCCGCGTGGCTGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGCTGCTTTAGGATTGGCACAGCTAGAGAAGTCCCCAAGATGCAGCAAGGAGGTAAATACATGAGAGAACAATGCACCCTTCAGA--GTGCCAGAGCCTTGGCAATGAGTCTGATAGTCCTAGGAGGTTCTGGAAGAAAGTCTGGAC s panTro4.chr19 59631130 436 + 63644993 TTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCATCACAAAACAAGACAGACTCCAAGACTGGTGAGTA--AGGAGATGCTCTCGGTTATGGGGCTGGCACAGAGGGTCGGGTCCTGTGAAGGGGAGGTGGGTGCCCTGGGTGGACATCCAGGGGTCCTGGGTGATGTTGATCTGCCCTGACCTCTGTGACCTCTTGGTCTACCATCCCCAGCCTCACACCTTCAGGATTACACAGTGGAGAATCTCATCCGCATGGCTGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGCTGCTTTAGGATTGGCACAGCCAGAGAAGTCCCCAAGATGCAGCAAGGAGGTAAATACAAGAGAGAACAATGCACCCTTCAGA--GTGCTAGAGCCTTGGCAATGGATCTGATAGTCCCAGGAGGTTCTGGAAGAAAGTCTGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56560804 436 + 60714840 TTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCATCGCAAAACAAGACAGACTCCAAGACTGGTGAGTA--AGGAGATGCTCTTGGTTATGGGGCTGGCACAGAGGGTCGGGTCCTGTTAACGGGAGGTGGGTGCCCTGGGTGGGCATCCAGGGGTCCTGGGTGAAGTTGATCTGCCCTGACCTCTGTGACCTCTTTGCCCACCATCCCCAGCCTCACACCACCAGGATTACACAGTGGAGAATCTCATCCGCATGGGCGTGGCTGGCTTGGTCCTGGTGGTCCTCCGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAACCCCCAAGATGCAGCCAGGAGGTAAACACAAGAGAGAACAATGCACCCTTCAGA--GTGCTAGAGCTTTGGCAATGAATCTGATAGTCCCAAGAGGTTCTGGAAGAAAGTCTGGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103224931 438 - 106955855 TTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCATCACAAAACAATTCAGACCCCAAGACTGGTGCGTG--AGGAGATGCTCTCAGTGATGGGGCTGGCACAGAGGGTCAGGTCCTGTGAAGGGGAGGTGGGTGCCCTGGGTGGGCATTCAGGGGTCCTGGGTGAAGTTGATCTGCCCTGACCTCTGTGGCCTCTTTGCCCACCCTCCCCAGCCTCACACCCTCAGGATTACACAGTGGAGAATCTCATCCGCATGGCCGTGGCTGGCTTGGTCCTGGTGGTCCTCGGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAGCCCCCAAGATGCAGCCAGGAGGTAAACACAAGAGAAAACAATGCACCCTTCAGAGTGTGCTAGAGCTTTGGCAATGAATCTGATAGTCCTAGGAGGTTCTGGAAGAAAGTCTGGAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60515954 436 + 64156825 TTGATTCTCAGGAGGAGCTGAGACCCTCAGCCCGTCACAAAACCAGACAGACTCCAAGACTAGTGAGTG--AGGAGATGCTCTCCGTTATGGGGCTGGCACAGAGGGTCAGGTCCTGTGAAGGGGAGGTGGGCATCCTGGGTGGACATCCAGGGGTCCTGGGTAATCATGATCTGCCCTGACCTCTGTGACCTCTTTGTCCACCATCCCCAGCCTCACACCCCCAGGATTACACCGTGGAGAATCTCATCCGCATGGCCGTGGCTGGCTTGGTCCTGGTGGTCCTTGGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAACTCCCAAGATGCAACCAGGAGGTAAACACAAGAGAGAACAATACACCCGTCAGA--GTGCTAGAGCCTTGGCAATGAATCTGATGGTCCCAAAAGGTTCTGAAAGAAAGTCTGGAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55615782 436 + 59248254 TTGATTCTCAGGAGGAGCTGAGACCCTCAGCCCGTCACAAAACCAGACAGACTCCAAGACTAGTGAGTG--AGGAGATGCTCTCCGTTATGGGGCTGGCACAGAGGGTCAGGTCCTGTGAAGGGGAGGTGGGCATCCTGGGTGGACATCCAGGGGTCCTGGGTCATGATGATCTACCCTGACCTCTGTGACCTCTTTGTCCACCATCCCCAGCCTCACACCCCCAGGATTACACCATGGAGAATCTCATCCGCGTGGCCGTGGCTGGCTTGGTCCTGGTGGTCCTTGGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAACTCCCAAGATGCAACCAGGAGGTAAACACAAGAGAGAACAATACACCCGTCAGA--GTGCTAGAGCCTTGGCAATGAATCTGATGGTCCCAAAAGGTTCTGAAAGAAAGTCTGGAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47687244 436 + 51301725 TTGATTCTCAGGAGGAGCTGAGACCCTCAGCCCGTCACAAAACCAGACAGACTCCAAGACTAGTGAGTG--AGGAGATGCTCTCGGTTATGGGGCTGGCACAGTGGGTCAGGTCCTGTGAAGGGGAGGTGGGCATCCTGGGTGGGCATCCAAGGGTCCTGGGTCATGTTGATCTGCCCTGACCTCTGTGACCTCTTTGTCCTCCATCCCCAGCCTCACACCCCCAGGATTACACCGTGGAGAATCTCATCCGCATGGCCGTGGCTGGCTTGGTCCTGGTGGTCCTTGGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAACCCCCAAGACGCAGCCAGGAGGTAAACACAAGAGAGAACAATGCGCCCGTCAGA--GTGCTAGAGCCTTGGCAATGAATCTGATGGTCCCAAAAGGTTCTGAAAGAAAGTCTGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47367920 436 + 50890351 TTGATTCTCAGGAGGAGCTGAGACCCTCAGCCCGTCACAAAACCAGACAGACTCCAAGACTAGTGAGTG--AGGAGATGCTCTCCGTTATGGGGCTGGCACAGAGGGTCAGGTCCTGTGAAGGGGAGGTGGGCATCCTGGGTGGACATCCAGGGGTCCTGGGTCATGATGATCTACCCTGACCTCTGTGACCTCTTTGTCCACCATCCCCAGCCTCACACCCCCAGGATTACACCGTGGAGAATCTCATCCGCATGGCTGTGGCTGGCTTGGTCCTGGTGGTCCTTGGGATTCTGCTGTTTTAGGATTGGCACAGCCAGAGAAACTCCCAAGATGCAGCCAGGAGGTAAACACAAGAGAGAACAATGCACCCGTCAGA--GTGCTAGAGCCTTGGCAATGAATCTGATGGTCCCAAAAGGTTCTGAAAGAAAGTCTGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45795922 436 + 49145316 TTGATTCTCAGGAGCAGCTGAGACCCTCAGCCCAACACAAAACAAGTCCCACTCCCAGGATGGTGAGTG--AGGAGATGCTCACGGTCATGGGGCTGGCACAGAGGGTCAGGTCCTGTCAAGGGGAGGTGGGTGCCCTGGGTGGACATCCAGaggtcctgggtgatgctgatcctccctgacctctgtgacctctttgcccaccatccccagcctcacACCCCCAGGATTACACAGTGGGGAATCTCATCCGCATGGGCGTGGCCGGCTTGGTCCTGGTGGTCCTCGGCGCTCTGCTCTTTGAGGCTCAGCGCAGCCAGAGAAGCCCCCAGGATGCAGCCAGGAGGTGAACAGCAGAGAGGACAGTGCGGCCTTCAGA--GTGGTGGAAACCTGAGAACAGATCTGATGATCCCAGCAGGTTCTGGAGACAATTTAGGGC i calJac3.chr22 T 28038 T 26331 s canFam3.chr1 102951580 432 + 122678785 ATGATTCTCAGAAGCATCTGACAACATCAACTCATCACAAACGAAGTCAGATCCCAGCAGTGGTAACTAGCAGAAAA----CTCAGTTTTAGGGCTGGTGTGGAGGGTGAAGTCCTGTCAAGGGGAGGCAGGTACCCTGGGTGGACATCCA-AGATCCCAAATGATTTGAGTCTGCCCTGACTTCTGTGATCTTTCTGTCC-TCATCCTTAGCCTCTGACCCCAAGGATTACACAGTGGAGAATCTCATCCGAATGGGCATGGCTACTGTGATGCTGGTGGTCCTCGGGATTCTCCTCTTTGAGTCCTGGTACAGTCAGAGAAGAACCCAAGATGCAGCCAGCAGGTAAACACAAGAGTGAACAACGCAACAATCAAA--ATCGCAGAGCCTGGGAAATACATCTCCTGTGCCCAGAAGGTTCTAGAGGAGCATGTAGGG i canFam3.chr1 C 0 C 0 a score=855098.000000 s hg38.chr19_GL949753v2_alt 439383 353 + 796479 CATCATTCG----GGAAACCGTCTACTGAGAAAGTC------GAGAA-GGGGAGGCTTGGGTCAGGTTCAGGGAGATGTCTGGGTGCCTGTAGAGAACGCTTCCTCCATTAAACTTCCATTAAATGGCAGTGCTTTCAGTCCTGCTGTTGTGGATCCTCCGTGTCTGCCCCTCCCTTCCTTTCGC--TCTCTGTGATGTGAAGGCACGTCCCCCATGGTGGGTTTGCATCCACACCCCTGCG-ATCACGTGCTCTGGTCCACTGTCCTGTAATACATTTGTCTTTGTTTCCAACTACCGCATTCTCTAAAGTGAACTATTGATTCTCCATCTTTTCAGTTCTGAGCATAGATCTGGATTAAATAACT s panTro4.chr19 59631566 353 + 63644993 CATCATTCG----GGAAACCGTCTACTGAGAAAGTC------GAGAA-GGGGAGGCTTGGGTCAGGTTCAGGAAGATGTCTGGGTGCCTGTAGAGAACGCTTCCTCTATTAAACTTCCATTAAATGGCAGTGCTTTCAGCCCTGCTGTTGTGGACCCTCCGTGCCTGCCCCTCCCTTCCTTTTGC--TCTCTCTGATGTGAAGGCACATCCCCCATGATGGGTTTGCATCCACACCCCTGCG-ATCGCGTGCTCTGGTCCACTGTCATGTAATATATTTGTCTTTGTTTCCAACTACCACATTCTCTAAAGTGAACTATTGATTCTCCATCTTTTCAGTTCTGAGCATAGATCTGGATTAAATAACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56561240 353 + 60714840 CATCATTCG----GGGAACTGTCTACTGAGAAAGTC------GAGAA-GGGGAGGCTTGGGTCGGGTGCAGGAAGATGTCTGGGTGCCTGTAGAGAACGCTTCCTCTGTTAAACCTCCATTAAACGGCAGTGCTTTCAGTCCTGCTGTTGTGGACCCTCCGTGCCTGCCCCTGCCTTCCTTTTGC--TCTCTGTGATGTGAAGGCACATGCCCCATGGTGGGTTTGCGTCCACACCCCTGCG-ATCGCGTGCTCTGGTCCACTGTCATGTAATATATTTTTCTTTGTTTCCAACTACCACATTCTCTAAAGTGAACTATTGTTTCTCCATCTCTTCAGTTCTGAGCATAGATCTGGATTAAATAACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103225369 353 - 106955855 CATCATTCA----GGAAACTGTCTACTGAGAAAGTC------GAGAA-GGGGAGGCTTGGGTCAGGTGCAGGAAGATGCCTGGGTGCCTGTAGAGAACGCTTCCTCTATTAAACCTCCATTAAACGGCAGTGCTTTCCATCCTGCTGTTGTGGACCCTCCGTGCCTGCCCCTCCCTTGCTTTTGC--TCTCTGTGACGTGAAGGCACATCCCCCGTGGTGGGTTTGCATCCACACCCCTGAG-ATCGCGTGCTCTGGTCCCCTGTCATGTAATATATTTTTCTTTGTTTCCAACTACCACATTCCCTGAAGTGAACTATTGATTCTACATCTCTTCAGTTCTGAGCATAGATCTGAATTAAATAACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60516390 353 + 64156825 CATCATTCG----GGAAACTGTCTACTGAGAAGGTC------GAGAA-GAGGAGGTATGGGTCAGGTGCAGGAAGATATCTGGGTGCCTGTAGAGAATGCTTCCTCTATTAAACCTCCATTAAATGGCGGTGATTTCCATCCTGCTGTTGTGGACCCTCTGTGACTGCCCCTCCCTTCCTTTTGC--TCCCTGTGACGTGAGGGCACATCCCCCGTGGTGGGTTTGCGTCCACACCCCTGTG-ATCATGTGCTCTGGTCCACTGTTATGTAATGCATTTTTCTTTGTTTCCAACTGCCACATTCCCTGAAGTGAACTATTGATTCTCCATCTCTTCAGTTCTGAGCATACATCTGGATTAAATAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55616218 353 + 59248254 CATCATTCG----GGAAACTGTCTACTGAGAAGGTC------GAGAA-GGGGAGGTATGGGTCAGGTGCAAGAAGATATCTGGGTGCCTGTAGAGAATGCTTCCTCTATTAAACCTCCATTAAATGGCGGTGATTTCCATCCTGCTGTTGTGGACCCTCTGTGACTGCCCCTCCCTTCCTTTTGC--TCCCTGTGACGTGAGGGCACATCCCCCGTGGTGGGTTTGCGTCCACACCCCTGTG-ATCATGTGCTCTGGTCCACTGTCATGTAATGCATTTTTCTTTGTTTCCAACTGCCACATTCCCTGAAGTGAACTATTGATTCTCCATCTCTTCAGTTCTGAGCATACATCTGGATTAAATAACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47687680 354 + 51301725 CATCATTCG----GGAAACTGTCTACTGAGAAGGTC------GAGAAggggggggCATGGATCAGGTGTAGGAAGATGTCCGGGTGCCTGTAGAGAATGCTTCCTCTATTAAACCTCCATTAAACGGCGGTGCTTTCCATCCTGCTGTTGTGGACCCTCCGTGActgcccctcccttccttttGC--TCCCTGTGACGTGAGGGCACATCCCCCGTGGTGGGTTTGCATCCACACCCCTGTG-ATCACGTGCTCTGGTCCACTGTCATGtaatgcatttttctttgtttccaacTGCCACATTCCCTGAAGTGAACTATTGATTCTCCATCTCTTCAATTCTGAGCATAGATCTGGATTAAATAACT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47368356 343 + 50890351 CATCATTCG----GGAAACTGTCTACTGAGAAGGTC------GAGAA-GCGGGGGCATGGGTCAGGTGTAGGAAGATGTCCGGGTGCCTGTAGAGAATGCTTCCTCTATTAAACCTCCATTAAATGGCGGTGCTTTCCATCCTGCTGTTGTGGACCCTCCGGGACTGCCCCTCCCTTCCTTTTGC--TCCCTGTGACGTGAGGGCACATCCCCCGTGGTGGGTTTGCGTCCACACCCCTGTG-ATCGCGTGCTCTGGTCCACTGTCATGTAATGCATTTTTCTTTGTTTCCAACTGCCACATTCCCTGAAGTGAACTATTGATTCTCCATCTCTTCAGTTCTGAGCATA----------AAATAACT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102952012 329 + 122678785 ---CATGTGCTGTGTAAACTGTC-----AGCAGGTCATTGTGAAGTG-GAGGAGTCATGGCTCATGTGCAGGGGCA---ATGGATGC---------ACCCTTCTGTCATTAAAC----------TGGACGCACCTTC---TCTACCATTGCTGAGTTGTCTTTACTGGCTCT---TGTCTTTCCCCATTTCAGTGAGTCCAGCTTATA-CCCATATGGCAGATTTTAGTCCACATCTCCATACACTGTATGCTTTGGGACAATTTCAGGTAACACATTTTTCTCCACTTCTAATCACTACACACCTTGAGGTACACAAAGGGGTCTCCATCTCTGTAGGTCAGATAATGCAGGTTGTTTTAATGATT i canFam3.chr1 C 0 N 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=691715.000000 s hg38.chr19_GL949753v2_alt 439736 336 + 796479 GGAATAGGTGGGCAGATTTGTATTTGGGACTTTGAAACATGAGTCTGAggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcagaagttcgagaccaacctggccaacatggtgaaaccctgtctctactaaaagatacaaaaattagctgggtgtggcagtgagcacctgtaatcccagctgctcaggaagctgaggtgggagaatagcttgaacccgggaggcggaggttgcagtgagccaagatcttgccactgcactccagcctggg--caacagagcaagactctatctccaaaa s panTro4.chr19 59631919 336 + 63644993 GGAATAGGTGGGCAAATTTGTATTTGGGACTTTGAAACATGAGTCTGAggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcagaagttcgagaccaacctggccaatatggtgaaaccctgtctctactaaaagatacaaaaattagctgggtgtggtagtgagcacctgtaatcccagctgctcgggaagctgaggcgggagaatagcttgaacccgggaggcggaggttgcagtgagccaagatcttgccactgcactccagcctggg--caacagagcaagactccatctccaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56561593 335 + 60714840 GGAATAGGTGGGCAAATTTGTATTTGGGACTTTGAAACATGAGTCTGAggccagaaacagtggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaagtcagaagttcgagaccaacctggccaacatggtgaaaccct-tctctactaaaagatacaaaaattagctgggtgtggcagtgagcacctgtaatcccagctactcgggaagctgaggcaggagaatagcttgaacccgggaggcagaggttgcagtgagccaagatcttgccactgcactccagcctggg--caacagagcaagactccatctccaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103225722 335 - 106955855 GGAACAGGTGGGCAAATTTGTATTTGGGACTTTGAAACATGAGTCTGAggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggggttcaagaccaacctggccaacatggtgaaaccctatctctactaacacccacatactgttgctgctcctgatctgcaacccctgtcttcccaatcctgatatactctcatgcctgataagagcttgaacccaggaggcccaggtttctatgagctctcatcttgtctttgcactccagcctggggataattgttc---cttccatctccaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60516743 336 + 64156825 GGAATAGGTGGGCAAATGTGTATTTGGGACTTTGAAACATGCGTCTGAggccaggcacagtggctcatgcctgtaataccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagttctagcccaacctggtcaatacggtgaaaccccatctctactaaaaattttaaaaattagctgggcatggtggggcatgcctgtaatcctagttattcgggaagctatggcaggagaattgcttgaacctgggaggcggaggctgcagtgagccgagattgggccaccacactccagcctggg--caacagaacaagactccatctcaaaaa i rheMac3.chr19 C 0 I 441 s macFas5.chr19 55616571 336 + 59248254 GGAATAGGTGGGCAAATGTGTATTTGGGACTTTGAAACATGAGTCTGAggccaggcacagtggctcatgcctgtaataccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagttctaggccaacctggtcaatacggtgaaaccccatctctactaaaaattttaaaaattagctgggcatggtggggcatgcctgtaatcctagttattcgggaagctatggcaggagaattgcttgaacctgggaggcggaggctgcagtgagccgagattgggccaccacactccagcctggg--caacagaacaagactccatctcaaaaa i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47688034 336 + 51301725 GGAATAGGTGGGCAAATGTGTATTTGGGACTTTGAAACATGagtctgaggccaggcacagtggctcatgcctgtaataccagcactttgggaggctgaggtgggcagatcacctgaggtcaggagttctaggccaacctggtcaatatagtgaaaccccatctctactaaaaatttaaaaaatcagctgggcatggtggggcatgcctgtaatcctagttactcgggaagctatggcaggagaatcgcttgaacccagaaggtggaggctgcagtgagccgagatcgggccaccacactccagcctggg--caacagaacgagactccatctcaaaaa i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47368699 336 + 50890351 GGAATAGGTGGGCAAATGTGCATTTGGGACTTTGAAACATGAGTCTGAggccaggcacagtggctcatgcctgtaataccagcactttgggaggctgaggtgggcagatcacctgaggtcaggagttctaggccaacctggtcaatacggtgaaaccccatctctactaaaaattttaaaaattagctgggcatggtggggcatgcctgtaatcctagttatttgggaagctatggcaggagaatcgcttgaacccgggaggcggaggctgcagtgacccgagatcgggccactacactccagcctggg--caacagaacgagactccatctcaaaaa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=8205.000000 s hg38.chr19_GL949753v2_alt 440072 13 + 796479 --aaaaaaaaaaaaa s panTro4.chr19 59632255 13 + 63644993 --aaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56561928 13 + 60714840 --aaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103226057 5 - 106955855 --aaaaa-------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55616909 11 + 59248254 --aaaaataaaaa-- i macFas5.chr19 I 2 T 15422 s papAnu2.chr19 47688372 11 + 51301725 --aaaaataaaaa-- i papAnu2.chr19 I 2 T 15186 s chlSab2.chr6 47369035 13 + 50890351 ataaaaataaaaa-- i chlSab2.chr6 C 0 I 628 e calJac3.chr22 45796358 26331 + 49145316 T e rheMac3.chr19 60517079 441 + 64156825 I a score=38.000000 s hg38.chr19_GL949753v2_alt 440085 1 + 796479 G s panTro4.chr19 59632268 1 + 63644993 a i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47673197 1 + 51301725 G i papAnu2.chr19 T 15186 C 0 e ponAbe2.chr19 56561941 0 + 60714840 C e calJac3.chr22 45796358 26331 + 49145316 T e nomLeu3.chr10 103226062 0 - 106955855 C e chlSab2.chr6 47369048 628 + 50890351 I e macFas5.chr19 55616920 15422 + 59248254 T e rheMac3.chr19 60517079 441 + 64156825 I a score=43871.000000 s hg38.chr19_GL949753v2_alt 440086 83 + 796479 GGAAATATGAGTCTGAAATGATGCCCTAGCACCCTCTCTGGACCCTGAATTCCCTTCACTCTTCATCGGATGATACCTGTGTA s panTro4.chr19 59632269 83 + 63644993 ggaaaTATGAGTCTGAAATGATGCCCTAGCCCCCTCTCTGGACCCTGAATTCCCTTCACTCTTCATCGGATGATACCTGTGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56561941 83 + 60714840 ggaaaTATGAGTCTGAAAAGATGCCCTAGCACCCTCTCTGGACCCTGAATTCCCTTCACTCTTCATCGGATGATACCTGTGTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103226062 83 - 106955855 TTAAGTAAGAGTATTAACTGATGTCCTCTTGCCTTCTCTGAACTCTGATTTCCCTTCACGCGTCTTAAAATTATACTAGTGTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47673198 83 + 51301725 GAAAAGATAAATGCACCATGATGCCCTCACCTCCTATGTGGACCCTATGAGCCCTTCCCTCCTTATCAGATGCTATCTGTGTA i papAnu2.chr19 C 0 C 0 s canFam3.chr1 102723015 81 + 122678785 GGAAACAGTGATGGAATACCATTCCTTAA-ATTTTTTCTGGACGCATAGAGATCTTCTCTACTCATCCAACAGCACATGTAT- i canFam3.chr1 N 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e macFas5.chr19 55616920 15422 + 59248254 T e rheMac3.chr19 60517079 441 + 64156825 I a score=78758.000000 s hg38.chr19_GL949753v2_alt 440169 101 + 796479 CTTCGTCCAGAAATATCATCTCTCAGAATGAGCACACTAACGCTCGAAGGCTCAGCCTCATGGTAT--TCTGTTAAACTGGCTCTCTGAAAAAATTATTTTCt s panTro4.chr19 59632352 101 + 63644993 CTTTGTCCAGAAATATCATCTCTCAGAATGAGCACACTAACGCTCGAAGGCTCAGCCTCATGGTAT--GCTGTTAAACTGGCTCTCTGAAAAAattattttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56562024 92 + 60714840 CTTTGTCCAGAAATATCATCTCTCAGAATTAGCACACTAATGCTTGAAGGCTCAGCCTCATGGTAT--GGT---------GATCTCTGAAAAAattattttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103226145 100 - 106955855 CTTTGTCAATAAATATCATCTCTCATAATTAGCACACTAATGCTTGAAGGCTTAGCCTCATGGTAT--GCTGCTAAACCGGATCTCTG-AAAAACTATTTTCt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55601498 91 + 59248254 GTTTCTCCTGAAATATCACCACTTGGAATCATCACACTGGCATTTTAAGTCACAACCCAAAGGTGT--GCT----------AATTCTGAAAAACACATTTTTT i macFas5.chr19 T 15422 I 15677 s papAnu2.chr19 47673281 91 + 51301725 GTTTCTCCTGAAATATCACCACTTGGAATAATCACACTGGCATTTTAAGTCACAACCCAAAGGTGT--GCT----------AAttctgaaaaacacatttttt i papAnu2.chr19 C 0 I 15543 s canFam3.chr1 102723096 97 + 122678785 CATTTTCCAGAAATACCATCAGTTTGAGTGAGCTCTGGGGTGTTTGAAGTGACAGCCT---GGTATGAGCTTCTACACTGGCTCTAAGAATTCATCATTT--- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e rheMac3.chr19 60517079 441 + 64156825 I a score=75418.000000 s hg38.chr19_GL949753v2_alt 440270 123 + 796479 taagaaaactctgaacatataaagccccagatttatggtatttgctgattagtgtggtataaatacgtcctttatggccaacttcagggtgcccatatgacgccattgaatgcacagttggga s panTro4.chr19 59632453 123 + 63644993 taagaaaactctgaacatataaagcccctgatttatagtatttgctacttagtgtggtataaatacgtcctttatggccaacttcagggtgcccatatgacgccattgaatgcacagttggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56562116 123 + 60714840 taagaaaactctgaacatataaagcccctgatttatagtatttgctaattagtgtggtataaatacgtcctttatggccaacttcagggttcccatatgacaccatcaaatgcacagttggga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103226245 123 - 106955855 taagaaaactctgaacatataaagcccctgatttatagtatttgctgattagtgtggtataaatacgtcctttatggccaacttcaaggtgcccatatgacaccactgaatgcacagttggga i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 102723193 105 + 122678785 ----------TTaaacagctg-------tcattcatgacatttgcccatttctttggtgtaaacactcccatcatggccaacatcaaggag-tcgtgtgaatgcaccgtatgcagaggtggga i canFam3.chr1 C 0 N 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e papAnu2.chr19 47673372 15543 + 51301725 I e macFas5.chr19 55601589 15677 + 59248254 I e rheMac3.chr19 60517079 441 + 64156825 I a score=725035.000000 s hg38.chr19_GL949753v2_alt 440393 1438 + 796479 agtagtcaaaagaattgtcgttcacac--gagtatgaaccagttGTAAAGTTTATTTAAAGGTTATAATAATTTCTGCTTCATTCTTATGGTGTAGTTTCAGTAAAATTGTAATGTCAAAAATCATAGCACAATGGAGGGAAAAG-AAAAAAATAggccgggtgtggtggctcatgcctgtaatcccaacactttgggaggccgaggcaggaggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccagacatggtggcgcctgcctgttaatcccagctacttgggaggccaaggcacgagaatcgcatgaacccaggaggcggaggttgcagtgagccgagatcactacagcctgggtgatagagcaagactcagtctcaataaaagaaaaaaGTAGCAAAATCATTTTttggaaagaatattgaacatgtagaattttagtacattaatagtaagagtacaaattgctttaatcaattaaggaagtgtattggaattatctagttaaaaagaggaggcacacggctgtgacccttcttaattatgtacttaattatgtaccctagagataaatgtctacttatgtgtcatgatacactcacaactgttataggaatgctgttcctattagccaaagctataaaata-ccaaagtccacctacgaaaaaaataaacatagtgtggtaaatagactcagtggaatattacaaggtagtaaaatgcataaatgaaaataacaaacagcaccatacttcaattttcaagcataaagtcaagtaaatgaagtatta-tttgaaaatgtgtgcatggttatttcattacataaaggtcaaaaggaggGTACATTTATTATTTAGGAAAACACACCTAAGATATCTTTGTAAAAtctgtaaaatcaatagtactgtttcccctctttcattccttatcttgaaaatgcttgtctctttttctGCCATGGCTTTCTACCTTGCTTGATATATTACAATTTTGTAACCTGCTTATTTCATCATATGTCATAAGTTCACATGTATATCCCATGAATTATTGAGGGTCTTATTCATTTCAAGTGGCATTTAGGTTTTTAAAAATATCTTTTGGCgaccaggtgcagtggctcatgcctgtaatcccagcactttgggaagccaaggcaggtggatcacgagttcaagagacagagatcatcctggcaaacatggtgaaaccccgtctctactaaaaatac-aaaaaaaaaaaaaattagctgggcatggtagagggtgcctgtagtcccagcttctcaggaggctgaggcgggagaatggcgtgaacccgagagacggaggttgcagtgagccgagatcgtgccactgcactccagcctggcaacagagtgagactctgtctcaa s panTro4.chr19 59632576 1427 + 63644993 agtagtcaaaagaattgtcgttcacacatgagtatgaaccagttGTAAAGTTTATTTAAAGGTTATAATAATTTCTGCTTCATTCTTATGGTGTAGTTTCAATAAAATTGTAATGTCGAAAG-CATAGCACAATGGAGGGAAAAG-AAAAAAATAggccaggtgtggtggcttatgcctgtaatcccaacactttgggaggccgaggcaggaggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccggatgtggtggcacctgcctg-taatcccagctacttgggaggccaaggcactagaatcgcttgaacccaggaggcagagattgcagtgagccgagatcactacagcctgggtgatagagcaagactcagtctcaagaaaagagaaaaGTAGCAAAATCATTTTttggaaagaatattgaacatgtagaattttagtacattaatagtaaaagtacaaattgctttaatcaattaaggaagtgtattggaattatctagttaaaaagaggaggcacatggctgtgaccctt------------cttaattatgtaccctagagataaatgtctacttatgtgtcatgatacactcacagctgttataggaatgctgttcctattagccaaagctataaaata-ccaaagtccacctatgaataaaataaacatagtatggtaaatagactcagtggaatattacaaggtagtaaaatgcataaatgaaaataacaaacagcaccatacttcagttttcaagcataaagtcaagtaaatgaagtatta-tttgaaaatgtgtgcatggttatttcattacataaaggtcaaaaggaggGCACATTTATTATTTAGGAAAACACACGTAAGAtatctttgtaaaatctgtaaaatcaatagtactgtttcccctctttcattcctgatcttgaaaatgcttgtctctttttctGCCATGGCTTTCTACCTTGCTTGATATATTACAATTTTGTAACCTGCTTATTTCATCATATGTCATAAGTTCACATGTATATCCCATGAATTATTGAGGGTCTTATTCATTTCAAGTGGTATTTAGGTTTTTAGAAATATCTTTTGGCgaccaggtgcagtggctcatgcctgtaatcccagcactttgggaagccaaggcgggtggatcacgagttcaagagacagagatcatcctggcgaacatggtgaaaccccgtctctactaaaaatacaaaaaaaaaaaaaaattagctgggcatggtagagggtgcctgtagtcccagcttctcaggaggctgaggcaggagaatggcgtgaacccgagagacggaggttgcagtgagccgagatcgtgccactgcactccagcctggcaacagagtgagactctgtctcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56562239 1424 + 60714840 agTAGTCAAAAGAATTGTTGTTCACACATGAGTATGGACCAGTTGTAAAGTTTATTTAAAGGTTATAATAATTTCTGCTTCATTCTTATGGTGTAGTCTCAATAAAATTGTAATGTCGAAAT-CATAGCACAATGGAGAGAAAAG-AAAAAAATAggccaggcgtggtggctcatgcctgtaatcccaacactttgggaggccgaggcgggaggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccagacgtggtggtgcctgcctg-taatcccagctacttgggaggccgaggcatgagaatcacttgaacccaggaggtggaggttgcagtgagccgagatcactacagcctgggtgatagagcaagactcagtctcaagaaaagaaaaaaGTATCAAAATCATTTTtcggaaagaatattgaacatgtagaattttagtacattaacagtaagagtacaaattgctttaatcaatttaggaagtatattggaattatctagttgaaaagaggaggcacacagctgtgaccctt-----------aattaattatgtaccctagagataaatgtctacttatgtgtcatgatacacttacagctgttataggaatgctgttcctattagccaaagctataaaaca-ccaaagtccacctatgaaaaaaataaacatagtgtggtaaatagactcagtggaatattaccaggtagtaaaatgcataaatgaaaataacaaacagcaccatgcttcaattttcaagcataaagtcaagcaaatgaaatattattttgaaaatgtatgcatggttatttcattacataaaggtcaaaaggaggATACATTTATTATTTAGGAAAACACACCTAAGAtatctttgtaaaatctgtaaaatcaatagtgctgtttcccctctttcattcctgatcttgaaaatgtttgtctctttttctGCCATGGCTTTCTACCTTTCTTGATATATTACAATTTTATAACCTGCTTATTTCATCATACTTCATAAATTCACATCTATATCCCATGAATTATTGAGGGCCTTATTCTTTTCAAGAGGTATTTAGGTTTTTAAAAATATCTTTTGGTggctgggtgcagtggctcacgcctgtaatcccagcattttgggaggctgaggtgggtggatcacaaggtcaagagacggagatcatcctgacgaacatggtgaaaccccatctctactaaaaatac-----aaaaaaaaaattagctgggcatggtagggggtgcctgcagtcctagctgtttgggaggctgaggcaggagaatggcatgaacccgggagacagaggttgcaatgagccaagatcgtgccactgcactccagcctggcgacagagtgaggctccatctcaa i ponAbe2.chr19 C 0 I 1632 s nomLeu3.chr10 103226368 1431 - 106955855 agtagtcaaaagaattgtcgttcacacatgagtatgaaccagttGTAAAGTTTATTTAAAGGTTATAATAATTTCTGCTTCGTTCTTATGGTGCAGTTTCAATAAAATTGTAATGTCGAAAT-CATAGCACAATGGAGGGAAAAGAAAAAAAATAggccaggcgtggtggttcatgcctttaatcccaacactttgggaggctgaggcaggaggatcacttggggtcaggagttcgagaccagcctggccaacacggtgaaaccccatctctactaaaaatacaaaaattagccagacgtggtggtgcctgcctg-taatcccagctactcgggaggccgaggcatgagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcactccagcctgggtgatacagcaagactcagtctcaaaaaaagaaaaaaGTAGCAAAACTGTTTTTTGGAAATAATATTAAACATGTAGAA-TTTAATAGATTAAtagtaagagtacaaattgctttaatcaattaaggaagtatattggaattatttagttaaaaagaggaggcacacagccgtgaccctt---aattgtgtacttaattatgtaccctagagataaatgtctacttatgtgtcatgatacactcacaactgttataggaatgctgttcctattagccaaagctataaaatacccaaagtccacctatgaaaataataaacatagggtggtaaatagactgagtggaatattacaatgtagtaaaatgcataaatgaaaataacaaacaacaccatacttcaattttcaagcataaagtcaagtaaatgaaatattattttgaaaatgtatgcatggttatttcattacataaaggtcaaaaggaggGTACATTTATTATTTAGGAAAACAC-CCTAAGAtatctttgtaaaatctgtaaaatcaatagtactgtttcccctctttcattcctgatcttgaaaatgcttgtctctttttctGCCATGGCTTTCTACCTTTCTTGATATATTACAATTTTGTAACCTGCTTATTTCATCATATGTCATAAGTTCACATGTATATCCCATGAATTATTGAGGGTCTCATTCATTTCAAGTGGTATGTAGGTTTTTAACAATATCTTTTGGTggccaagtgcagtggctcatgcctgtaatcccagcactttgggaagccaaggcgggtggatcacgaggtcaagagacggagatcatcctgacgaacatggtgaaaccccgtctctactaaaaatcc----aaaaaaagaaattagctgggcatggtagggggtgcctgtagtcccagctactcaggaggctgaggcgggagaatggcgtgaacccaagaaacggaggttgcagtgagccaagatcgtgccactgcactccagcctggcaacagagtgagactctgtctc-- i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e papAnu2.chr19 47673372 15543 + 51301725 I e macFas5.chr19 55601589 15677 + 59248254 I e rheMac3.chr19 60517079 441 + 64156825 I a score=46770.000000 s hg38.chr19_GL949753v2_alt 441831 190 + 796479 aaaaaaaaaaaaagaaagaaagaaaGGAAGAAAAAAAAATCTTCTGGCATTAACTATTAAGAAATTGCACTATAAAAAGAGAATATAATGCATAAGACGGCAATTTGAAAAGATTCAGATATAATTTTTTCTTATCTAGTAAATACTTAGTAATTTGTCTAATGCATGCCTTAAATACATACCACTTTAT s panTro4.chr19 59634003 186 + 63644993 aaaaaaaaaaaaaga---aaagaaagaaaG-AAAAAAAATCTTCTGGCATTAACTATTAAGAAATTGCACTATAAAAAGAGAATATAATGCATAAGATGGCAATTTGAAAAGATTCAGATATAATTTTTTCTTATCTAGTAAATACTTAGTAATTTGTCTAATGTGTGCCTTAAATACATACCACTTTAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103227799 182 - 106955855 -aaaaaaaaaaaag----aaagaaa--aag-aaaaaaaATCTTTTGGCATTAACTATTAAGAAATTGCACTATAAAAAGAGAATATAATGCATAAGACGGCAATTTGAAAAGATTCAGATATAATTTTTTCTTATCTAGTAAATACTTAGTAATTTGTCTAATGCGTGCCTTAAATACATACCACTTTAT i nomLeu3.chr10 C 0 C 0 e ponAbe2.chr19 56563663 1632 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e papAnu2.chr19 47673372 15543 + 51301725 I e macFas5.chr19 55601589 15677 + 59248254 I e rheMac3.chr19 60517079 441 + 64156825 I a score=82705.000000 s hg38.chr19_GL949753v2_alt 442021 70 + 796479 gcagaggttgccatgagccgagatcgcgccgttgcactctagcctgggtggcagagcaagactccatctc s panTro4.chr19 59634189 70 + 63644993 gcagaggttgccgtgagctgagatcgcgccgttgcactctagccagggtggcagagcaagactccgtctc i panTro4.chr19 C 0 I 12 s ponAbe2.chr19 56565295 70 + 60714840 gcagaggttgcagtgagccgagatcacgccattgcactgtagcctgggtgacagagcaagactctgtctc i ponAbe2.chr19 I 1632 C 0 s nomLeu3.chr10 103227981 70 - 106955855 gcagaggttgcagtgagctgagatagtgccattgcactctagcctgggcgtcagagcaagactccatctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55617266 70 + 59248254 gcagaggttgcagtgagccaagatcacgccattgcactctagcctgggggacagagcaagactctgtctc i macFas5.chr19 I 15677 I 4 s papAnu2.chr19 47688915 70 + 51301725 gcagaggttgcagtgagccaagatcacaccattgcactctagcctgggggacagagcaagattctgtctc i papAnu2.chr19 I 15543 I 4 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47369048 628 + 50890351 I e rheMac3.chr19 60517079 441 + 64156825 I a score=21786.000000 s hg38.chr19_GL949753v2_alt 442091 25 + 796479 aaaaaaaaaaaagaaaaTCTCACAG s panTro4.chr19 59634271 25 + 63644993 aaaaaaaaaaaaaaaaaTCTCAAAG i panTro4.chr19 I 12 C 0 s ponAbe2.chr19 56565365 22 + 60714840 aaaaaaaaaaaaaaa---CTCAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103228051 24 - 106955855 aaaaaaaaaaaaaaa-aTCCCAGAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55617340 17 + 59248254 aaaaaaaaaaaaaaaaa-------- i macFas5.chr19 I 4 I 4 s papAnu2.chr19 47688989 17 + 51301725 aaaaaaaaaaaaaaaaa-------- i papAnu2.chr19 I 4 I 1 s chlSab2.chr6 47369676 22 + 50890351 aaaaaaaaaaaaaaaaaTCTCA--- i chlSab2.chr6 I 628 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e rheMac3.chr19 60517079 441 + 64156825 I a score=1351722.000000 s hg38.chr19_GL949753v2_alt 442116 558 + 796479 AAGGAGACCCAGAGCTTCCAGCCTCGCCCA-------------------GAGTCTTGGCTCACTCCCTGTGTGTGTGGACCCTAGGGAGCCTCTTCTGTTCCCCACAGAGGTGGAAACTTCCTCCTTAATAACCCCTTGATGGTCCCAGGCACTGGTGACCACTGAGCTTTGCTCTCTC-TTTTTTCTTATGGTTCCCTGTCTACTTCCAGGGCTATCACTTTACTTTTTGTGCATTAGACCATGAATAATGTTTTAGAAACATTCTATCAAATTTCTCAGTACTAGGAACAACTGAGGTTTTTGATTGGGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGGTCTGGAAATAAATTATGTTTAAGC-CATCCCATACCCCAGCCACAtcaagccccacaaccactctgagaagtgagatttatagcaaaatgctccaaacaaggtaactaaggttcagacaagggatgttaatgtgtccatttacataaac-aaaaaatggtagaTGATCAGCTTTCCCTTTGAAATCAGAG s panTro4.chr19 59634296 559 + 63644993 AAGGAGACCCAGAGCTTCCAGCCTTGCCCA-------------------GAGTCTTGGCTCACTCCCTGTGTGTGAGGACCCTAGGGATCCTCTTCTGTTCCCCACAGAGGTGGAAACTTCCTCCTTAATAACCCCTTGATGGTCCCAGGCACTGGTGACCACTGAGCTTTGCTCTCTC-TTTTTTCTTATGGTTTCTTGTCTACTTCCAGGGCTATCACTTTACTTTTTGTGCATTAGACCATGAATAATGTTTTAGAAACATTCTATCAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTTGATTGGGTGCCTCAAATGTCTACCCTTACTGCGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCGTGCCTTAACCTGGTCTGGAAATAAATTATGTTTAAGCTCATCCCATACCCCAGCCACATCAAGCCCCACAACCACTCTGAGAAGTGAGATTTATAGCAAAATGCTCCAAACAAAATAACTAAGGTTCAGACAAGGGATGTTAATGTGTCCATTTACATAAAC-AAAAAATGGTAGATGATCAGCTTTCCCTTTGAAATCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56565387 578 + 60714840 AAGGAGAACCAGAGCTTCCAGCCTCGCCCAGAGTCTTGGCTCACTCCCTGAGTCTTGGCTCACTCCCTGTGTGTGAGGACCCTAGGGAGCCTCTTCTGTTCCCCACAGAGGTGGAAACTTCCTCCTTAATAACCCCTTGATGCTCCCAGGCACTGGTGATCACTGAGCTTTGCTCTCTC-TTTTTTCTTATGGTTCCCTGTCTACTTCCAGGGCTATCACTTTACTTTTTGTGCATAAGACCATTAATAATGTTTTAGAAACATTCTATCAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTTGATTGGGTGGCTTAAATGTCTACCTTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGGTCTGGAAATAAATTATGTTTGAACTCATCCCATACCCCAGCCACCtcaagccctacaaccactctgagaagtgagatttgtagcaaaatgctccaaacaaagaaactaaggctcagaaaagggatgttaaggtgtccatttacataaac-aaaaaatggtagaTGATCAGCTTTCCCTTTGAAATCAGAG i ponAbe2.chr19 C 0 I 4953 s nomLeu3.chr10 103228075 560 - 106955855 AAGGAGAACCAGAGCTTCCAGCCTCGCCCA-------------------GAGTCTTGGCTCACTCCCTGTGTGTGAGGACCCTAGGGAGCCTCTTGTGTTCCACGCAGAGGTGGAAACTTCCTCTTTAATAACCCCTTGATGGTCCCAGGCACTAGTAACCACTGAGCTTTGCTTTCTCTTTTTTTCTTATGGTTCCCTGTCTACTTCCAGGGCTATCACTTTACTTTTTGTGCATTAGACCATGAACAATGTTTTAGAAATGTTCTATCAAATTTCTCAGTGCTGGGAACAACTGAGGTTTTTGATTGGGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAGCAAGTCCCAACCCCTTCATGCCTTAACCTGGTCTGGAAATAAATTATGTTTGAGCTCATCCCACACCCCAGCCACATCAAGCCCCACAACCACTCTGAGAAGTGAGATTTATAGCAAAATGCTCCAAACAAGGTAACTAAGGCTCAGACAAGGGATGTTAATGTGTCCATTTACATAAAC-AAAAAATGGTAGATGATCAGCTTTCCCTTTGAAATCAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60517520 559 + 64156825 AAGGAGAACCAGAGCTTCCAGCCTCGCCCA-------------------GAGTCTTGACTCACTCCCTGTCTGTGAGGACCCTAGGGAGCCTCTTCTGTTCCACACAGAAGTGGAAACTTCCTCCTTAATAACCCCTTGATGGTCCCAGGCACTGGTGACCACTGAGCTTTGCTCTCTC-TTTTTTCTTATGATTCTCTGTCTACTTCCAGTGCTATCACTTTACTTTTTGTGCATAAGACCATGAGTAATGTTTTAGAAACTTTCTATTAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTCGATTGAGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGATCTGGAAATAAATTATATTTGAGCTCATCCCATACCCCAGCCACAtcaagccccacaatcactctgagaagtgagatttatagcaaaatgctccaaacaaggaaactaaggttcaggcaagggatgttaatgtgtccatttacataaat-aaaaaatggtagaTGATCAGCTTTCCCTTTGAAATCAGAG i rheMac3.chr19 I 441 C 0 s macFas5.chr19 55617361 558 + 59248254 -AGGAGAACCAGAGCTTCCAGCCTCGCCCA-------------------GAGTCTTGACTCACTCCCTGTCTGTGAGGACCCTAGGGAGCCTCTTCTGTTCCACACAGAAGTGGAAACTTCCTCCTTAATAACCCCTTGATGGTCCCAGGCACTGGTGACCACTGAGCTTTGCTCTCTC-TTTTTTCTTATGATTCTCTGTCTACTTCCGGTGCTATCACTTTACTTTTTGTGCATAAGACCATGAGTAATGTTTTAGAAACTTTCTATTAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTCGATTGAGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGATCTGGAAATAAATTATATTTGAGCTCATCCCATACCCCAGCCACAtcaagccccacaatcactctgagaagtgagatttatagcaaaatgctccaaacaaggaaactaaggttcaggcaagggatgttaatgtgtccatttacatagat-aaaaaatggtagaTGATCAGCTTTCCCTTTGAAATCAGAG i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47689007 557 + 51301725 agggagaaccAGAGCTTCCAGCCTCGCT---------------------GAGTCTTGACTCACTCCCTGTCTGTGAAGACCCTAGGGAGCCTCTTCTGTTCCACACAGAAGTGGAAACTTCCTCCTTAATAACCCCTTGATAGTCCCAGGCACTGGTGACCACTGAGctttgctctctc-ttttttcttatgattCCCTGTCTATTTCCGGTGCTATCACTTTACTTTTTGTGCATAAGACCATGAATAATGTTTTAGAAACTTTCTATCAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTCGATTGAGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGATctggaaataaattatatttgagcTCATCCCATACCCCGGCCACATCAAGCCCCACAATCACTCTGAGAAGTGAGATTTATAGCAAAATGCTCCAAACAAGGAAACTAAGGTTCAGGCAAGGGATGTTAATATGTCCATttacacaaac-aaaaaatggtaGATGATCAGTTTTCCCTTTGAAATCAAAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47369698 555 + 50890351 -AGGAGAGTCAGAGTTTCCAGCCACGCCCA-------------------GAGTCTTGACTCACTTCCTGTCTGTGAGGACCCTAGGGAGCCTCTTCTGTTCCACACAGAACTGGAAACTTCCTCCTTAATAACCCCTTGATGGTCCCAGGCACTGGTGACCACTGAGCTTTG----CTC-TTTTTTCTTATGATTCCCTGTCTACTTCCAGTGCTATCACTTTACTTTTCGTGCATAAGACCATGAATAATGTTTTAGAAACTTTCTATTAAATTTCTCAGTGCTAGGAACAACTGAGGTTTTCGATTGAGTGCCTCAAATGTCTACCCTTACTGTGGAGTCCAACAACAGGATTCTAACAAGTCCCAACCCCTTCATGCCTTAACCTGATCTGGAAATAAATTATATTTGAGCTCATCCCATACCCCAGCCACATCAAGCCCCACAATCACTCTGAGAAGTGAGATTTATAGCAAAATGCTCCAAACAAGGAAACTAAGGTTCAGGCAAGGGATGTTAATGTGTTCATTTACATAAACAAAAAAATGGTAGATGATCAGCTTTCCCTTTGAAATCAGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=806160.000000 s hg38.chr19_GL949753v2_alt 442674 441 + 796479 TACTAATCTGACTCATTGTTCCCTGAATTTTAGAGGCAGGACCTCAGGAGGAGCTAAGAATCCTACCCCAGGAaaattaccaatatcagaaaggaaacaatgacatcagtacagatcctacagaattcaaaagattctaagtggacattatgaagacattattcagcttagatgaagtggtcacatatcacaagaaaacaaactgtctaaaacaatctctgaaatacctagacattccctgaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaatgtcccctagtgcactctccaaaacatgtagataggaataaataCTGTTCTGAAAGACATTTCCCTGGAATTACAACCATTCAATATATTTTAAAAGGCAATCATAAaaatataaaaaggatatatcaggagaaga s panTro4.chr19 59634855 441 + 63644993 TACTAATCTGACTCATTGTTCCCTGAATTTTAGAGGCAGGACCTCAGGAGGAGCTAAGAATCCTACCCCAGGAaaattaccaatatcagaaaggaaacaatgacatcagtacagatcctacagaattcaaaagattctaagtggacattatgaagacattattcaccttagatgaagtggtcacatatcacaaggaaacaaactgtctaaaacaatccctgaaatacctagacattccctgaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaatgtcccctagtgcactctccaaaacatgtagataagaataaatacTGTTCTGAAAGACATTTCCCTGGAATTACAACCATTCAATATATTTTAAAAGGCAATCATAAaaatataaaaaggatatatcaggagaaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103228635 441 - 106955855 TACTAATCCGACTCACTGTTCCCTGAATTTTAGAGGCAGGCCCTCAGGAGGAGATAAGAATCCTACCCCAGGAaaattacgaatatcagaaaggaaacattgacatcagtacagatcctacagaattcaaaagattctaagtggacattatgaagacagtattcagcctagatgaagtggtcacatatcacaagaaaacaaattgtctaaaacaatctctgaaatacctagacatttcctgaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaATGTCCCCTAGTGCACTCTCCAAAATATGTAGATAAGAATAAATACTGTTCTGAAAGACATTTCCCTGGAATTACAACCATTCAATATATTTTAAAAGGCAATCGTAAaaatataaaaaggatatatcaggagaata i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60518079 439 + 64156825 TACTAATCTGACTCATTGTTCCCTGAATTTTAGAGGCAGAACCTCAGGGGGAGATAAGAATCCTACCTCAGGAaagttaccaatatcagaaaggaaacaatgacatcagtacagatgctacagaattcaaaagattctaagtggacattatgaagacattattcagcttagatgaagtggtcacatatcacaagaaaaccaattgtctaaaacaatctctgaaatacctagacattca--aaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaatgtcccttagtgcactctccaaaacatgtagataagaataaatacTGTTCTGAAAGACATGTCCCTGGAATTACAAGCATTCAATATAATTTAAAAGGCAATCATAAAAATATAAAATGGATATATCAGGAGAAGA i rheMac3.chr19 C 0 I 2988 s macFas5.chr19 55617919 439 + 59248254 TACTAATCTGACTCATTGTTCCCTGAATTTTAGAGGCAGAACCTCAGGGGGAGATAAGAATCCTACCCCAGGAaagttaccaatatcagaaaggaaacaatgacatcagtacagatgctacagaattccaaagattctaagtggacattatgaagacattattcagcttagatgaagtggtcacatatcacaagaaaaccaattgtctaaaacaatctctgaaatacctagacattca--aaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaatgtcccttagtgcactctccaaaacatgtagataagaataaatacTGTTCTGAAAGACATGTCCCTGGAATTACAAGCATTCAATATAATTTAAAAGGCAATCATAAAAATATAAAATGGATATATCAGGAGAAGA i macFas5.chr19 C 0 I 2766 s papAnu2.chr19 47689564 439 + 51301725 TACTAATCCGACTCATTGTTCCCTGAATTTTAGAGGCAGAACCTCAGGGGGAGATAAGAATCCTACCCCAGGAAAGTTACCAATATCAGAAAGGAAACAATGACATCAGTACAGATCCTACAGAATTCAAAAGATTCTAAGTGGACATTATGAAGACATTATTCAGCTTAGATGAAGTGATCACATATCACAAGAAAACTAATTGTCTAAAACAATCTCTGAAATACCTAGACATTCC--AAATCATTgagttattaaataaaatacattttaaaattaaactctttTCAGGAAATAAACTTCAATGTCCCTTAGTGCACTCTCCAAAACACAGAGATAAGAATAAATACTGTTCTGAAAGGCATGTCCCTGGAATTACAAccattcaatatattttaaaaggcaatcataaaaatattaaacggATATATCAGGAGAAGA i papAnu2.chr19 C 0 I 2712 s chlSab2.chr6 47370253 439 + 50890351 TACTAATCCAACTCATTGTTCCCTGAATTTTAGAGGCAGAACCTCAGGGGGAGATAAGAATCCTACCCCAGGAaagttaccaatatcagaaaggaaacaatgacattagtacagatcctacagaattcaaaagattctaagtggacattatgaagacattattcagcttagatgaagtggtcacatatcacaagaaaaccaattgtctaaaaccatctctgaaatacctagacattcc--aaatcattgagttattaaataaaatacattttaaaattaaactcttttcaggaaataaacttcaatgtcccttagtgcactctccaaaacacgtagataagaataaatacTGTTCTGAAAGACATGTCCCTGGAATTACAACCATTCAATATAATTTAAAAGGCAATCATAAAAATATAAAATGGATATATCAGGAGAAGA i chlSab2.chr6 C 0 I 2712 e ponAbe2.chr19 56565965 4953 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T a score=803981.000000 s hg38.chr19_GL949753v2_alt 443115 3040 + 796479 aatgtaaatggcctaaattccccacataaaaggcatagagtggcaacgtggataaaaagccaagagccaactgcctgctgtcttcaagagacccatctcacatgtaatgacacccacaggctcaaagtaaaaggatgaagaaatatttactaggcaaccaggaaacaaaaaaaaggaaggcattcctattcttatatcacatgaaacacactttaaatcaacagcaatcaggaaggacaaagaagggcattacaaaatgataaagggttcaatttgacagaagacttaactattctaaatatatatgcacccaaatttggagcactccgattcataaaacaagttattcttcacctatgaaaagagttagacagccacacaataatagtaagggacttcagtatcccactaacaacgtcagatgaatcactaaaacagaaaactaacaaagaaattctggtcttaaagacaacacttgaccaattggacctcatagac-----atctacagagtactccacccaacaactgcagaatatagattcttcttatctgcacacacaaaaaacatatcatattctaagactggccacaaagcaagtctcaataaattcaaagaatcaaaatcataacaaggcacacaataaaaatag-aaaaaaataccaagatgatctctcaaaactacagaaaaacatggaaatttaacaacttgtttctgaatgaatattaagagccatctatgacaaatccacagccaacatcatattgaatggtcaaaagctggaactgtaccccttgagaactcttgggtgaacaatgaaattaaagcagaaatcacaaaacattatttaaaattaataaaaatagaaacaaacttaccaaaacctttgggatgcagttaaagcagtgataagaggaaaatttatagcaatacatgcctcatcagaagtttagaaagatctcaaattagtgacttaacactgcatctagaggaactattaaaaaaaaggaacagtccaaacccaaggccagcaaaagatgagaaataactaaagtcagagagaactgaataaattgagaccaaaaagtccatacaagagataaataaaaccaagagtttttctttgaaaaaaaataaacaaaattcatagactgttagctagattaacaaagaaaaagagaaaagatccaaataaacacaaatagaactgacaaaacaatgttacgaacaatcccacagaaatagaaaagatcgtcaaagactattatgaacacctctatacaaacaagctagaaaacctagaagaaatggataaattcctggtaacacaaaatttatcatatttcaaccaggaagaaagtgaaaacctgaacagaccaataacaagttcagaaatttaatcagtaataaaaaccctactaactaaaaatagcccaggaccagacggattcacagccaaaatccaacagccatacaaagaagaactgataccgatcttactgaaacttttggaaaaaatcaaggagtgggggcttcttcctaactcattctatgaagccatcatcaccatgataccaacatctgtcagagacataatgaaaaaaagaaaactacaactaaatatccttaatgaacatagaca-taaaatcctcaacaaaatgctagcaaattgaatctgtcagtgcatcaaaagttaattcacatgatcaagtaagctttatttttgggatgcaaggttggttcaacctaca-aagtcaacgaatgtgattcacctcataaacataattaaaaacaaaaactatatgatcatctcaatagatgcaaaaaaagctttctgtaaaatccaacatcccttcatgataaaaactgtcaataggcatcaaaggaacatacctcaaaatattaagagccatctatgacaaacccacagccaacatcatattgatgggcaaaagctggaaccataccccttgagaaccgaaacaagaccaagatgaccactcccgccattttaattcaacatggtactggaagtcctagccaaagcaatcaggcaagagaaggaaataaaaggcattaaaattggaaaagaagtagtgatactgtctctctttgctgatgaaataattttatacatagaaaaccctaaagactctgtcagaaggctcctgaaactgataaacaaattcaataaagtttcgggattaaaaaaatgtacacaaattagtaacatttctatgcaccactaacattctagctgagaactaaatcaagaacacaattccatttacactagccacaaagaaaataaaatacctaggaatccatctaaccaagaaggtgaaaattctctacaaggagaactacaaaacacttctgaaagaaataagaaatgatacaaacaaatggaagaatattccatgctcatgaattaggagaacaaatagttaaaatcgccatacttccaaaaacaaattgcagagtcaatgctatccatttcaaaatgcaatgtcatttttcacgaaattataaaaatttattctaaaatgtatttggcaccaaaaaaagagcctgaatacacataggaatcctaagcacaaagaacaaagcccaggcatcacattacccaacttcaaactatactacaatgctatagtaacccaaacagcatgatactactacaaaaacagacacatagaccaatgagacagaatagagaacccagaaatgaggctacatacctacaatcatctttgaaaaaattgacaaaaacaagcaatgtggaaagtaccctttcttcaataaatagttctgggataactgactactcatatgcaaaataatagaactggacccctaactctcactatatacaaaaattaacccaagatagtttaaagatttaaatgtaaaacctcaaaatattaaaattctagaagaaaacctaggaaatatccttctcaagatagactttggcaaagaatttatggctaactccccaaaaccaattgtgacaaagacagaaattgggacctaactcaact s panTro4.chr19 59635296 3029 + 63644993 aatgtaaatggcctaaattccccacataaaaggcatacagtggcaacatggataaaaagccaagagccaactgcctgctgtcttcaagagacccatcacacatgtaatgacacccacaggctcaaagtaaaaggatggagaaatatttactaggcaaccaggaaacaaaaaaagagaaggcattcctattcttatatcacatgaaacacactttaaatcaacagcaatcaggaaggacaaagaagggcattacaaaatgataaagggttcaatttggcagaagacttaactattctaaatatatatgcacccaaatttggagcaccccgattcataaaacaagttattcttcacctatgaaaagagttagacagccacacaataatagtaagggacttcagtatcccactaacaacgtcagatgaatcactaaaacagaaaactaacaaagaaattctggtcttaaagacaacgcttgaccaattggacctcatagac-----atctacagagtaccccacccaacaactgcagaatatagattcttcttatctgcacacacaaaaaacatatcatgttctaagactggccacaaagcaagtctcaataaattcaaagaatcaaaatcataacaaggcacacaataaaaatag-aaaaaaatacgaagatgatatctcaaaactacagaaaaacatggaaatttaacaacttgtttctaaatgaatattaagagccatctatgacaaatccacagccaacatcatattgaatggtcaaaagctggaaccgtaccccttgagaactcttgggtgaacaatgaaattaaagcagaaatcacaaaacattatttaaaattaataaaaatagaaacaaacctaccaaaacctttgggatgcagttaaagcagtgataagaggaaaatttatagcaatgcatgcctcatcagaagtttagaaagatctcaaattagtgacttaacactgcatctagaggaactattaaaaaaaaggaacagtccaaacccaaggccagcaaaagatgagaaataactaaagtcagagagaactgaataaattgagaccaaaaagtccatacaagagataaataaaaccaagagtttttctttgaaaaaaaataaacaaaattcatagactgttagctagattaacaaagaaaaagagataagatccaaataagcacaaacagaactgacaaaacaatgttacgaacaatcccacagaaatagaaaagatcgtcaaagactattatgaacacctctatacaaacaagctagaaaacctagaagaaatggataaattcctggtaacacaaaatctctcatatttcaaccaggaagaaagtgaaaacctgaacagaccaataacaagttcagaaattgaatcagtaataaaaaccctactaactaaaaatggcccaggaccagatggattcacaaccaaaatccaacagccatacaaagaagaactaataccgatcctactgaaacttttggaaaaaatcaaggagtgggggcttcttcctaactcattctatgaagccatcatcaccatgataccaacatctgtcagagacataatgaaaaaaagaaaactacaactaaatatccttaatgaacatagacaggaaaatcctcaacaaaatgctagcaaattgaatctgtcagtgcatcaaaagttaattcacatgatcaagtaagctt--tttttgggatgcaaggttggttcaacctaca-aagtcaacgaatgtgactcacctcataaacataattaaaaacaaaaactatatgatcatctcaatagatgcagaaaaagctttctgtaaaatccaacatcccttcatgataaaaactgtcaat---------aggaacatacctcaaaatattaagagccatctatgacaaacccacagccaacatcatattgatgggcaaaagctggaaccataccccttgagaactgaaacaagaccaggatgaccactcccgccattttaattcaacatggtattggaagtcctagccaaagcaatcaggcaagagaaggaaataaaaggcattaaaattggcaaagaagtagtgatactgtctctctttgctgatgaaataattttatacgtagaaaaccctaaagactctgtcagaaggctcctgaaactgataaacaaattcaataaagtttcaggattaaaaaaatatacacaaattagtaacatttctatgcaccactaacattctagctgagaactaaatcaagaacacaatcctatttacactagccacaaagaaaataaaatacctagggatccatctaaccaagaaggtgaaaattctctacaaggagaactacaaaacacttctgaaagaaataagaaatgatacaaacaaatggaagaatattccatgctcatgaattaggagaacaaatagttaaaatcgccatacttccaaaaacaaattgcagactcaatgctatccatttcaaaatgcaatgtcatttttcatgaaattataaaaatttattctaaaatgtatttggcacc-aaaaaagagcctgaatacacataggaatcctaagcacaaagaacaaagcccaggcatcacattacccaacttcaaactatactacaatgctatagtaacccaaacagcatgatactactacaaaaacagacacatagaccaatgagacagaatagagaacccagaaatgaggctacatacctacaatcatctttgacaaaattgacaaaaacaagcaatgtggaaagtaccctttcttcaataaatggttctgggataactgactactcatatgcaaaataatagaactggacccctaactctcaccatacacaaaaattaacccaagatagtttaaagatttaaatgtaaaacctcaaaatattaaaattctagaagaaaacctaggaaatatccttctcaagatagactttggcaaagaatttatggctaactccccaaaaccaattgtgacaaagacagaaattgggacctaactcaact i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103229076 3040 - 106955855 aatgtagatggcctaaattccccacataaaaggcatagagtggcaacatggataaaaagccaagagccaactgcctgctgtcttcaagagacccatctcacatgtaatgacacccacaggctcaaagtaaaaggatggagaaacatttactaggcaaccagcaaacaaaaaaagagaaggcatacctattcttatatcacatgaaacacactttaaatcaacagcaatcaggaaggacaaagaagggcattacaaaatgataaagggttcaatttgacagaagacttaactattctaaatatatatgcacccaactttggagcacccagattcataaaacaagttattcttcacctatgaaaagagttagacagccacacaataatagtaagggacttcagtatcccactaacaacgtcagatgaatcactaaaacagaaaactaacaaagaaattctggtcttaaagacaatgcttgaccaatgggacctaatagacatctaatctacagagcactctacctaacaactgcagaatatagattcttcttatctgcacacacaaaaaacatatcatattctaagactggccacaaagcaagtctcaataaattcaaagaatcaaaatcataacaaggcacacaataaaaatagaaaaaaaataccaagatgatctctcaaaactacagaaaaacatggaaatttaacaacttgtttctgaatgaatattaagagccatctatgacaaatccacagccaacatcctattgaatggtcaaaagctggaaccataccccttgagaactcttgggtgaacaatgaaattaaagcagaaatcacaaaacattatttaaaattaataaaaatagaaacaaacttaccaaaacctttgggatgcagttaaagcagtgataagaggaaaatttatagcaatacatgcctcatcagaagtttagaaagatctcaaattagtgacttaacactgcatctagaggaactattaaaaaaaaggaacagtccaaacccaaggcctgcaaaagatgagaaataaccaaagtcagagagaactgaataaattgagacccaaaagtccatataagagataaataaaaccaagag-ttttctttgaagaaaaataaacaaaattcatagactgttagctagactaacaaagaaaaagagataagatccaaatgagcacaaatagaactgacaaaacaatgttatgaacgatcccacagaaatagaaaagatcatcaaagactattatgaacacctctatacacacaagctagaaaacctagaagaaatggataaattcctggtaacacaaaatctctcatatttcaaccaggaag-aagtgaaaacctcaacagaccaataacaagttcagaaattgaatcagtaataaaaaccctactaactaaaaatagcccaggaccagatggattcacaaccgaaatccaacagccatacaaagaaaaactgatactgatcctactgaaacttttggaaaaaatcaaggagtgggggcttcttcctaactcattctatgaagccattatcaccatgataccaacatctgtcaaagacataatg-aaaaaagaaaactacaactaaatatccttaatgaacatagacacaaaaatcctcaacaaaatactagcaaattgaatctgtcagtgcatcaaaagttaattcacatgatcaagtaagctttatttttgggatgcaaggttgtttcaacttacacaagtcaatgaatgtgattcccctcataaacataattaaaaacaaaaactatatgatcatctcaatagatgcagaaaaagctttccataaaatccaacatcccttcatgataaaaactgtcaataggcatcaaaggaacatacctcaaagtgttaagagccgtctatgacaaacccacagccaacatcatattgatgggcaaaagctggaaccataccccttgagaactgaaacaagaccaggatgacaactctcgccattttaattcaacatgatagtggaagtcctagccaaagcaatcaggcaagaaaaggaaataaaagacattaaaattggaaaagaagtagtaatactatctctctttgctgatgagataattttatacatagaaaaccctaaagactctgtcagaaggctcctgaaactgataaacaaattcaataaagtttcaggattaaaaaaatgtacacaaattagtaacatttctatgcaccactaacattctagctgagaactaaatgaagaacataatcccatttacactagccacaaagaaaacaaaatacctaggaatccatctaaccaagaaggtgaaaagtctctaca---agaactatgaaacacttctgaaagaaataagaaatgatacaaacaaatggaagaatattccatgctcatgaattagggaaaccaatagttaaaatcaccatactttcaaaaacaaattgcagactcaatgccatccatttcaaaatacaatgtcatttttcacaaaattataaaaatttattctaaaatgtatttggcacc-aaaaaggaacctgaatacacataggaatcctaagcacaaagcacaaagcccaggcattgcattacccaacttcaaactagactacaaggctatagtaacccaaacagcatgatactactacaaaaacagacacatagaccaatgagacagaatagagaacccagaaatgaggctacagacctacaaccatctttgacaaaattgacaaaaa-aagcaatgtggaaagtaccctttcttcaataaatggttctgggataactgactactcatatgcaaaataatagaactggacccctaaatctcaccatatacaaaaattaacccaagaaagcttaaagatttaaatataaaacctcaaaatattaaaattctagaagaaaacctaggaaatacccttctcaagataaactttggcaaataatttatggctaactccccaaaactaattgtgacaaaaacagaaattgggacctaactcaact i nomLeu3.chr10 C 0 C 0 e ponAbe2.chr19 56565965 4953 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47370692 2712 + 50890351 I e papAnu2.chr19 47690003 2712 + 51301725 I e macFas5.chr19 55618358 2766 + 59248254 I e rheMac3.chr19 60518518 2988 + 64156825 I a score=2107662.000000 s hg38.chr19_GL949753v2_alt 446155 4051 + 796479 gaagagcttctgcacagcaaacgaaagtatcaacagagtaaacagataacctacagactgggagaaaatatttgcaaactatgcatctgacaaagttctaatatccagaatctataaggaatgtaaacaaatcaacaagcagaaaaccaaaaaacctcaattaagtatgacatgaacagacacttctcaaaagaagatgtacacatggccaaaaaacatatgaacaaatgcttattatcagtaatcatcagagaaatgcaaattaaaaccacagtgagataccatctcacaacaatcagagaagcagaagcaattactaaaaagttttttgtttttttt-aataacagatgctgacaagattgtggagaaaagggaacacttatacactcttggtgggaatgttaactagttcagccaatgtgataagcagtttggagacttctcaaataacttaaaatagaactactattcaatcaagcaatcccactactgggtatataccaaaaggaaggtaattaactatgtcaaaaagacacatgcactagtatattcattgctgtgcaattcagaatagcaaagatttgcagtcaacctaagtgctcaccaacagtggattagttaaagaaaatgtgctacatatacacatggaacattacatggccataaaaaataatgaaatcatgtcctttgcagcaacatgaatgtagcaggaggtcaatctcctaagtgaactaacccaggaacagaaaaccaaataccacatgttatcacttataactgagaaccaaacattgaatacacatgaacataaagatggaaacaacagataccgaggactacagatggggggaggagtagggaggtataggctgaagaaacacctgttggattctatgctcattgcctgggtgatggcattgttggaaccacaaacctcagagtcacacaatatgcctatgtaacaaacctgcatgcatacctttaatctacagtaaaggttgaaGTTATTTAAAAATAGGAAGAAGAATTACCCTATACCTAAAGCTAAGATTTTTCCCTTTGAATATTCGTTTCTTCATCACTGTAGATAAGCAGGGAAAG-AAAAATTATTATACTATACTAGCCTTTTATGTGACCATGAGGATTTGGGGTAGGTAGGTGGACAGCTTAGATAATTCACCAGGATATTGATACAGGCTCCATGGCTGGAAATAACCAAGGATGAGtgctgtgttttgagtggtctcccccagaaacgtttgttgaaatcctaacccctggtatgtatgaatgtgaATTcatattatataaaaaggaataaatagcctgagcacagtggctcacacctgtaatcccagcactttgggaggccaaagcaggtggatcatttgaggtcaggagttctggccaatatggcaaaacttcatctctacaaaaaaaaaataca-aaaaaaaaaattggctgggtatggtggcgcatgcctgtagtcccagctactcaggaggctgaggcaggaattgctgaaacctggaaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggtgagacggcaagatattctgtcaaaaataaataaataaaaaacagaagaagaaatacaagaatgacagcaaactttgtattcaaaactatgaaagtaagaaacaggtggaccaacatttttaaagtgctacaagaaaatatttcaaactagaatctttcaacctgaaaaggaaaacattttcctgcaataaaggtgccattaaaaatgtctcacaatttattacatgaagcattgttctacaataaatgttaagctcttgaagc-aaagattaatgataccatttagtaacttgaaattcaaaaaagtggaagtatcccaagaggcaaatacgtgtgcaattattaaaTGTTTCATATCAACACCCAACCTTATGCTGTCTACATAAGCTGCACTTCAAATACTAATCCACAAGATGTAAATATTGAAAGAATGACATTACCTTGTCATGATAATGCCCAGTGCAAAATATGCTTCTAGTCAGTTGTATACATAGAATAGGTAAATGTTTGTAATAAAAAGTATTCCTCAATAGAAGTTTCTTAACTCAAAGAATGAAATATTTCACCATGCACATACAAAGaaga-gatatatggagatatgaagaggagtacttcataatgacaaagaggcaaattcataaataagacataatcatcctaaatgcctacacacttaaagctggaacctcaaaacacattaaattaaaggcataattcaaaacataatcaatcacatcc-aaattgcagctagagatagcaacattcacctcacttccagaacaagtacacagaaaattattaagcatatgaaagacttgaaaaacaTTTGTGTAGGCGGCGGGTGCATAAGGTTGGGTGTTGATATGAAACATTTAATAATTTCAAtaatcctagcactttgggaggccaaaatgggaggatcacttgaggccaggagtttgagaccagcctgggcaccatagtgagaccccgtctctaTTTTTTTTAAATAAAGAAAAACATTTGAATGA-TTTTTTTcttaactgacatttagaaaacatccacctcaaatcttcctaatccacaaacttgtctagcacccctggaacattcaccaaaataaatttttaaatgctgaatcataggtaatatgatagatgaaacagttgaattaaattataaatgtacaacaaggaaatgctggggaaattatcaaatattttaaaattaataaacacacatagcaataaacaatgagtggaagaaaaacatttcaaagaaaggtggaaaatattttgtatcaattaaaaatgaaaacacatctcggcaaatgactggggatacagatagaacagcgttaagggacaataagcctcaaatgtctgtgttagaaaagaaggaagagctgagtaaataggtaactttcacttgcagaaatactacacatcagcaaattaattccaaagtaacgtcgaggaaaaacataaaatggcaagcaaatatatacgtgcatatgtacatacattcataaatgacaaacaggacagaaaaatcagtgacatcaattttgttccttagaagaaacaggaaaattgacCCCAAAAAACTTTCCAGGCCACATTTGGTCATGAtggaaatattttggcacttcctggttaagctcaacaccaacttgcacccaaaaccaataatttcatttctaggtaaatatgtctaattaattcagcatatgtatgcaagggatcacacagaaacacgattatcaaggcccgagttataaaagagaaaatccggaaacaacacaaatgtccatgataaaaagaatggataattacatgttgataaagttatgcatggactattaaactgcaatccaaaagaataaaatagagctataaaattcaatatgtatatggtgtcatagaaacacaaatgtgagaaaaagaaagaaaaatacaaaatttatattttttaaaatttgaaacaactatatatgtgagtgcttagggtgtgtgtgtgtgtgtgtgtgtgtgtgtataaccatatgtatataAATGCACACATACGCACACATATAGAATGTCCCggccaggcatggtggctcacacctgtaatctcagcactttgggaggctgaagtagacagatcacttgaggttaggagttcaagaccagcctggccaacatggagaaacctcctctctactaaaagtacaaaaattaggtgggcgtggtggtgggtgcctgtaaatccagctacttaggaggctgaggcacgagaattgcgtgaacctgggaggtggaggctgcaatgagccgaggtctcaccactgcattccaaactgggtgacgaagtgagattgcatctcaaaaaaaaaaaaa--GTTCTAAAAGTTGTGACTTgggtgtggcagattgtgacatactgccagctgctagaaatgctggggcaggaggattgcttgaactctgaagtcaaagaacagcctgggg s panTro4.chr19 59638325 4038 + 63644993 gaagagcttctgcacagcaaacaaaagtatcaacagaataaacagataacccacagactgggagaaaatatttgcaaactatgcatctgacaaagttctaatatccagaatctataaggaatgtaaacaaatcaacaagcagaaaaccaaaaaacctcaattaagaatgacatgaacagacacttctcaaacgaagatgtacacatggccaaaaaacatatgaacaaatgcttattatcagtaatcatcagagaaatgcaaattaaaaccacaatgagataccatctcacaacaatcagagaagcagaagcaattactaaaaagttttttgtttttttt-aataacagatgctgacaagattgtcgagaaaagggaacacttatacactcttggtgggaatgttaactagttcagccaaagtgataagcagtttggagacttctcaaataacttaaaatagaactactattcaatcaagcaatcccactactgggtatataccaaaaggaaggtaattaactatgtcaaaaagacacatgcactagtatattcattgctgtgcaattcagaatagcaaagatttgcaatcaacctaagtgctcaccaacagtggattagataaagaaaatgtgctacatatacacatggaatattacatggccataaaaaataatgaaatcatgtcctttgcagcaacatgaatgtagcagggcgtcaatctcctaagtgaactaacccaggaacagaaaaccaaataccacatgttatcacttataactgagaaccaaacattgaatacacatgaacataaagatggaaacaacagataccgaggactatagatggggggaggagtagggaggtataggctgaagaaacacctgttggattctacgctcattgcctgggtgatggcattgttggaaccacaaacctcagagtcacacaatatgcctatgtaacaaacctgcatgcatacctttaatctacagtaaaggttgaaaTTATTTAAAAATAGGAAGAAGAATTACCCTATACCTAAAGCTAAGATTTTTCCCTTTGAATATTAGTTTCTTCATCACTGTAGATAAGCAGGGAAAG-AAAAATTATTATACTATGCTAGCCTTTTATGTGACCATGAGGATTTGGGGTAAGTAGGTGGACAGCTTAGATAATTC----------TGATATAGGCTCCACAGCTGGAAATAACCAAGGATGAGtgctgtgttttgagtggtctcccccagaaacgtttgttgaaatcctaacccctagtatgtatgaatgtgaactcatattatataaaaaggaataaatagcccaagcacagtggctcacacctgtaatcccagcactttgggaggccaaagcaggtggatcatttgaggtcaggagttctggccaatatggcaaaacttcatctctac-aaaaaaaaatac--agaaaaaaaattggctgggtatggtggtgcatgcctgtagtcccagctacccaggaggctgaggcaggaattgctgaaacttggaaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgagtgagacagcaagatactctgtcaaaaataaataaataaaaaacagaagaagaaatacaagaatgacagcaaactttgtattcaaaactatgaaagtaagaaataggtggaccaacatttttaaagtgctacaagaaaatatttcaaactagaatctttcaacctgaaaaggaaaacatttttctgcaataaaggtgccattaaaaatgtctcacaatttattacatgaagcattgttctacaataaatgttaagctcttgaagc-aaagattaatgataccatttagtaacttgaatttcaaaaaagtggaagtatcacaagaggcaaatacgtgtgaaattattaaaTGTTTCATATCAACACCCAACCTTATGCTGTCTACATAAGCTGCACTTCAAATACTAATCCACAAGATGTAAATATTGAAAGAATGACATTACATTGTCATGATAATGCCCAGTGCAAAATATGCTTATAGTCAGTTGTATACACAGAATAGGTAAATGTTTGTAATAAAAAGTATTCCTTAATAGAAGTTTCTTAACTCAAAGAATGAAATATTTCACCATGCACATACAaagaaga-gaaatatggagatatgaagaggagtacttcacaatgacaaagaggcaaattcataaataagacataatcatcctaaatgcctacacacctaaagctggaacctcaaaacacattaaattaaaggcataattcaaaacataatcaatcacatccaaaattgcagctagagatagcaacattcacctcacttccagaacaagtacacagaaaattgttaagcatatgaaagacttgaaaaacaTTTGTGTAGGCGGTGGGTGCATAAGGTTGGGTGTTGATATGAAACATTTCATAATGTCAAtaatcctagcactttgggaggccaaaatgggaggatcacttgaggccaggagtttgagaccagcctgggcaccatagcgagaccccgtctctattttttttaaataaagaaaaaCATTTGAATGA-TTTTTTTcttaattgacatttagaaaacatccacctcaaatcttcctaatccacaaacttgtctagcacccctggaacattcaccaaaataaaattttaaatgctgaatcataggtaatatgatagatgaaacagttgaattaaattataaatgtacaacaaggaaatgctggggaaattatcaaatatatgaaaattaataaacacacatagcaataaacaatgagtggaagaaaaacatttcaaagaaaggtggaaaatattttgtatcaattaaaaatgaaaacacatctcggcaaatgactggagatacagatagaacagtgttaagggacaatacgcctcaaatgtctatgttagaaaagaaggaagagctgagtaaataggtaactttcacttgcagaaatactacacatcagcaaattaattccaaagtaacgttgaggaaaaacataaaatggcaagcaaatatatacgtgcatatgtacatacattcataaatgacaaacaggacagaaaaatcagtgacatcaattttgttccttagaagaaacaggaaaattgacCTCCAAAAAATTTCCAGGCCACATTTGGTCATGAtggaaatattttggcacttcctggttaagctcaacaccaacttgcacccaaaaccaataatttcatttctaggtaaatatgtctaattaattcagcatatgtatgcaagggatcacacagaaacatgattatcaaggcccgagttataaaagagaaaatccggaaacaacacaaaggtccatgataaaaagaatggataattacatgttgataaagttatgcatggactattaaactgcaatccaaaagaataaaatagagctgtaaaattcaatatgtatatggtgtcatagaaacataaatgtgagaaaaagaaagaaaaatacaaaatttatattttttaaaatttgaaacaactatatatgtgagtgcttagg----gggtgtgtgtgtgtgtgtgtgtgtataaccatatgtatataAACGCACACATACGCACACATATAGAATGTCCCggccaggcatggtggctcacacctgtaatctcagcactttgggaggctgaagtggacagatcacttgaggttaggagttcaagaccagcctggccaacatggagaaacctcctctctactaaaagtacaaaacttaggtgggcgtggtggtgggcgcctgtaaatccagctacttaggaggctgaggcatgagaattgcttgaacctgggaggtggaggctgcaatgagccgaggtctcaccactgcattccaaactgggtgatgaagtgagattgcatctcaaaaaaaaagaaaaTGTTCTAAAAGTTGTGACTTGGGTGTGGCAGATTGTGACATACTGCCAGGTGCTAGAAATgctggggcaggaggattgcttgaactctgaagtcaaagaacagcctgggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56570918 4052 + 60714840 gaagagcttctgcacagcaaaagaaagtatcaacagagtaaacagataa-ttacagactgggagaaaatatttgcaaactatgcatctgacaaagttctaatatccagaatctgtaaggaatgtaaacaaatcaacaagcagaaaaccaaaaaacctcaattaaaaatgacatgaacagacacttctcaaaagaagatgtacacatggccaaaaaacatatgaacaaatgcttattatcagtaatcatcagagaaatgcaaattaaaaccacaatgagataccatctcacaccagtcagagaagcagaagcaattactaaaaagttttttgttttttttaaataacagatgctgacaagattgtggagaaaagggaacacttatacactcttggtgggaatgttaactagttcagccaatgtgataagcagtttggagacttctcaaataacttaaaatagaactactgttcaatcaagcaatcccactactgggtatatacccaaaggaaggtaattaactctgtcgaaaagacacatgcactagtatattcattgccgtgcaattcagaatagcaaagatttgcaatcaacctaagtgctcaccaacagtagattagataaagaaaatgtgctacatatacacatggaatattacatggccataaaaaataatgaaatcatgtcctttgcagcaacatgaatgtagcaggaggtcagtctcctaagtgaactaacccaggaacagaaaacaaaataccacatgttaccacttataactgagaaccaaacattgagtacacatgaacataaagatggaaacaacagataccgaggactatagatggggggaggagtagggaggtataggctgaagaaacacctgttggattctatgctcattgcctgggtgatggcattgttggaaccacaagcctcagagtcacagaatatgcctatgtaacaaacctgcatgggtacctttgatctacaataaagattgaaaTTATTTAAAAATAGGAAGAAGAATTACCCTATACCTAAAGCTAAGATTTTTCCCTTTGAATATTAGTTTCTTCATCACTGTAGATAAGCAGGGAAAGAAAAAATTATTATACTATACTAGCCTTTTATGCGACCATGAGGATTTGGGGTAAGTAAGTAGACAGCTTAGATAATTCACCAGGATATTGATACAGGCTCCACAGCTGGAAATAACTAAGGATGAGtgctgtgttttgagtggtctcctccagaaacgtttgttgaaatcctaacccctagtatgtatgaatgtgaactcatattatataaaatggaagaaatagcccgagcacagtggctcacacctgtaatcccagcactttgggaggccaaagcaggtggatcatttggggtcaggagttctggccaatatggcaaaacttcatctctac--aaaaaaaatgca-aaaaaaaatattggctgggtatggtggtgcatgcctgtagtcccagctactcgagaggctgaggcaggaattgctgaaacctggaaggcagaggttgcagtgagccaagatcatgccactgcactccagtctgggtgagacagcaagatactctgtcaaaaataaataaataaaaaacagaagaagaaatataagaatgacagcaaactttgtattcaaaactatgaaagtaagaaataggtggaccaacatttttaaagtgctacaagaaaatatttcaaactagaatctttcaacctgaaaaggaaaacatttttctgcaataaaggtgccattgaaaatgtctcacaatttattacatgaagctttgttctatgataaatgttaagctcttgaagcaaaagattaatgataccatttagtaacttgaatttcaaaaaagtggaagtatcacaagaggcaaatacatgtgaaattattaaaTGTTTCATATCAACATCCAACCTTATGCTGTCTACATAAGCTGCACTTCAAATACTAATCCACAAGATGTAAATATTGAAAGAATGACACTACATTGTCATGATAATGCCCAAAGCAAAATATGCTTATAGTCAGTTGTATACATAGAATAGGTAAATGTTTGTAATAAAAAGTATTCCTCAATAGAAGTTTCTTAACTCAAAGAATGAAATATTTCACCACGCACATACAAAGAAGaggaaatatggagatatgaagaggagtacttcataatgacaaagagacaaattcataaataagacataatcatcctaaatgcctacacacctaaagctggaacctcaaaacacattaaattaaaggcataattcaaaacataatcagtcacatccaaaattgcagctagagatagcaacattcacctcacttccagaacaagtacacagaaaattattaagcatatgaaaaacttgaaaaacaTTTGTGTAGGCAGTGGGTGCATAAGGTCGGGTGTTGATATGAAACATTTAATAATTTCAAtaattgtagcactttgggaggccaaaatgggaggatcacttgaggccaggagtttgagacaagcctgggcaccatagcaagaccccatctctaTTTTTTTTAAATAAAGAAAAACATTTGAATGA-TTTTTTTcttaattgacatttagaaaacatccacctcaaatcttcctaatccacaaacttgtctagctcccctggaacattcaccaaaataaatttttaaacgctgaatcataggtaatatgatagatgaaacagttgaattaaattataaatgtacaacaaggaaatgctggggaaattatcaaatatttgaaaattaataaacacatatagcaataaacaatgagtggaagaaaaacatttcaaagaaaagtggaaaatattttgtatcaattaaaaatgaaaacacatctcagcaaatgactggggatacagatagaacagtattaagggacaataagcctcaaatgtctatgttagaaaagaatgaagagctgagtaaatatataactttcacttgcagaaatactacacatcagcaaattaattccaaagtaacatcgaggaaaaacataaaatggcaagcaaatatatacatgcacatgtacatacattcataaatgacaaacaggacagaaaaatcagtgacatcaattttgttccttagaagaaacaggaaaattgaccaaAAAAAAATTTCCAGGCCACATTTGGTCATGATggaaatattttggcacttcctggttaagctcaacaccaacttgcacctgaaaccaataatttcatttctaggtaaatatgtctaattaattcggcatatgtatgcaagggatcacacagaaacatgattatcaaggcccgagttataaaagaaaaaatccagaaacaacacaaatgcccatgataaaaagaatggataattacatgttgataaagttatgcatggactattaaactgcaatccaaaagaataaaatagagctataatattcaatatgtatatggtgtcatagaaacataaatgtgagaaaaagaaagaaaaatacaaaaTTTATATTTTTTAAAATTTGAAACAACTATATATGTGAGTGCTTAGG-GgtgtgtgtgtgtgtgtgtgtgtgtgtATAACcatatgcatataaacatacacatacacacacatataGAGTGTCCCggccaggcatggtggctcacacctgtaatctcagcactttgggaggctgaagtggacagatcacttgaggttagaagttcaagaccagcctggccaacatggagaaacctcctctctactaaaagtacaaaaattaggtgggcgtggtggtgagtgcttagaattccagctacttaggaggctgaggcacaagaattgcttgaacctgggaggtggaggctgcaatgaaccaaggtctcaccactgcgttccaaactgggtgatgaagcgagagtgtgtctcaaaaaaaaaaaaT--GTTCTAAAAGTTGTGACTTCGGTGTGGCAGATTGTGACgtactgccagctgctagaaatgctggggcaggaggattgcttgaactctgaagtcaaagaccagcctgggg i ponAbe2.chr19 I 4953 C 0 s nomLeu3.chr10 103232116 4001 - 106955855 gaagagcttctgcacagcaaaagaaagtatcaacagagtaaacagataacctacagactgggagaaaatatttgcaaactatgcctctgacaaagttctaatatccagaatctataaggaatgtaaacaaatcaacaagcagaaaaccaaaaaaccttaattaaaaatgacatgaacagacaattctcaaaagaagatgtacacatggccaaaaaacatatgaacaaatgcttattatcagtaatcatcagagaaatgcaaattaaaaccacaatgagataccgtctcacaccagtcagagaagcagaagcaattactaaaaagttttttgtttttttttaataacagatgctgacaagactgtggagaaaagggaacacttatacactcttggtgggaatgttaagtag-tcagccaatgtgataagcagtttggagatttctcaaataacataaaatagaactactattcaatcaagcaatcccactactgggtatatacccaaaggaaggtaattaactctgtcaaaaagacacatgcactagtatattcattgctgtgcagttcggaatagcaaagatttgcaatcaacctaagtgctcaccaatagtggattagataaagaaaatgtgctacatatacacatggaatattacatggccat-aaaaataatgaaatcatgtcctttgcagcaacatgaatgtagcaggaggtcaatctcctaagtgaactaacccaggaacagaaaaccaaataccacatgttatcacttataactgagaacgaaacattgaatacacgtgaacataaagatggaaacaacagataccgaggactatagatcgggggaggagtagggaggtataggctgaagaaacacctgttgggtactattctcattgcctgggtgatggcactgttggaaccacaagcctcagagtcacacaatatgcctatgtaacaaacctgcacgcgtacctttaatctacaataaaggttgaaaTTATTTAAAAACAGGAAGAAGAATTACCCTATACCTAAAGCTAAGATTTTTCCCTTTGAATATTAGCTTCTTCATCACTGTAGATAATCAGGGAAAG---AAACTATTATACTATACTAGCCTTTTATGTGACAATGAGGATTTGGGGTAAGTAGGTGGACAGCTTAGATAATTCACCAGGATGTTGATACAGGCTCCACAGCTGGAAATAACCAAGGATGAGtgctgtgttttgagtggtctcccccagaaacgtttgttgaaatcctaacccctagtatgtatgaatgtgaactcatATTATATAAAAAGGAAGAAATAGCccgagcacagtggctcacacctgtaattccagcagtttgggaggccaaagcagttggatcatttgaggtcaggagttctggccaatatggcaaaacttcatctctac-aaaaaaaaacacacacacacaaaattggctgggtatggtggtgcatgcgtgtagtcccagctactcaggaggctgagacaggaattgcttaaacctggaaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggtgagacagcaagatattctgtcaaaaataaataaataaaaaacagaagaagaaatataagaatgacagcaaactttgtattcaaaactatga---------------ggaccaacatttttaaagtgctacaagaaaatatttcaaactagaatctttcaactcgaaaagaaaaacatttttctgcaataaaggtgccattaaaaatgtctcacaatttattacatgaagctttgttctacaataaatgttaagctcttgaaggaaaagattaatgacaccatttagtaacttgaatttcaaaaaagtggaagtatcacaagaggcaaatacatgtgaaattattaaatgtttcatatcaacacccaaccttatgctgtctacataagcggcacttcaaacactaatccacaagaTGTAAATATTGAAAGAATGACATTACATTGTCATGATAATGCCCAATGCAAAATATGCTTATAGTCAGTTGTATACATAGAATAGGTAAATGTTTGTAATAAAAAGTATTCCTCAATAGAAGTTTCTTAACTCAAAGAATGAAATATTTCAGCATGCGCATACAAAGAAGAGGAAATATGGAGATAtgaagaggggtacttcataatgacgaagagacaaattcataaataagatgtaatcatcctaaatgcctacacacctaaagctggaacctcaaaacacattaaattaaaggcataattcaaaacataatcagtcacatccaaaattgcagctagagatagcaacattcacctcacttccagaacaagtacacagaaaattattaagcatatgaaagacttgaaaaacagttgtGTAGGTGGTGGTggc-------------------------------tcatgcctgtaatcctggcactttgggaggccaaaatgggaggatcacttgaggccaggagtttgagaccagcctgggcaccatagcaagactccatctctatttttTTTAAATAAAGAAAAACATTTGAATGACTTTTTTTCTTAATTGACATTTAGAAAACAT-CACCTCAAATCTTCCTAATCCATAAACTTGTCTAACACCCCTGGAACATTCACTAAAATAAatttttaaatgctgaatcataggtaatatgatagatgaaacagttgaattaaattataaatacacaacaaggaaatgctggggaaattatcaaatatttgaaaattaataaacacgcatagcaataaagaatgagt-gaagaaaaacatttcaaagaaaagtggaaaatattttgtatcaattaaaaatgaaaacacatctcagcaaatgactggggatacagatagaacagtgttaagggacaattagcctcaaatgtctatgttagaaaagaaggaagagctgagtaaatatgtaactttcacttgcagaaataccacacatcagcaaattaattccaaagtaacatcgaggaaaaacataaaatggCAAGCAAATATAtacatgcatatgtacatacattcataaatgccaaACAGGACAGAAAAATCAGTGACGTCAATTTTATTCCTTAGAAGAAACAGGAAAATTGACCAAAAACAAATTTCCAGGCCACATTTGGTCATGATGGAAAtattttggcacttcctggttaagctcaacaccaacttgcacccaataccaataatttcatttataggtaaatatatctaattaattcggcatatgtatgcaagggatcacacagaaacatgattatcaaggcccgagttataaaacagaaaatccagaaacaacgcaaatgcccatgataaaaagaatggataattacatgttgataaagttatgcatggactattaaattgcaatccaaaagaataaaatagagctataaaattcaatatgtatatggtgtcatagaaacataaatgtgagaaaaagaaagaaaaatacaaaatttatatttttaaaaatttgaaacaactatatatgtgagTGCTTGGg-tgtgtgtgtgtgtgtgtgtgtgtgtgtATAACCATATGGATATAAACGCACACATACACACACATATAGAATGTCCTggccaggcatggtgggtcacacctgtaatctcagcactttgggaggctgaggtggacagatcacttgaggttagaagttcaagaccagcctggccaacatggagaaacctcctctttactaaaagtacaaaaattaggtgggcgtggtggtgggtgcctgtaaatccagctacttaggaggctgaggcacgagaattgcttgaacctgggaggtggaggctgcaatgagccaaggtctcaccactgcattcctagctgggtgatgaagtgagattgcatctcaaaaaaaaaaT----GTTCTAAAAGTTGTGACTTGGGTGTGGCAGATTGTGACGTACTgccagctgctagaaacgctggggcagaaggattgcttgaactctgaagtcaaagaccagcctgggg i nomLeu3.chr10 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47370692 2712 + 50890351 I e papAnu2.chr19 47690003 2712 + 51301725 I e macFas5.chr19 55618358 2766 + 59248254 I e rheMac3.chr19 60518518 2988 + 64156825 I a score=1215458.000000 s hg38.chr19_GL949753v2_alt 450206 513 + 796479 aaaatagcACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGTTATAGTGAAGGATGCAAGGTGTCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCTGCTCTTGACCAAACAGCCACTGGGCCTCATGCAAGGTAGAAATAGCCTGCATACGTCATCCTCCCATGATGTGGTCAGCATGTAAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCGGTGGGGTGGAGATCTGGGCCTGGA-GTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATATAGGCCTGGAGTGGAGATA s panTro4.chr19 59642363 512 + 63644993 aaaatagcACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATAC-TCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGTTATAGTGAAGGATGCAAGGTGTCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCAAGGTAGAAATAGCCTGCATACGTCATCCTCCCATGATGTGGTCAGCATGTAAACTGCGTGAGCCCCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCACCTGTCTGCACCGACAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCGCTGGGATGGAGATCTGGGCCTGGA-GTGGAGATCTGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGGTATAGGCCTGGAGTGGAGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56574970 512 + 60714840 aaaatagcACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGATATTGGATCTGAGACGTGTTTTGAGTTGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCA-GAAGCCATATTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCAAGGTAGAAATAGCCTGCATACGTCATCCTCCCATGATGTGGTCAGCATGGAAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCAGCACCATGTCACTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGCGCTGGGGTGGAGATCTGGGCCTCGA-GTGGAGATATGGGCCTGGAGTGGAGATATAGGCCTGGAG-TGGAGATATAGGCCTGGAGTGGAGATC i ponAbe2.chr19 C 0 I 11 s nomLeu3.chr10 103236117 513 - 106955855 aaaacagcacatgAAGAGGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAAGCCAAGCATTCAGTCATCTCCTGTATGAGAGACTGGATCCGAGATGTGTTTTGAGTTGGTCATAGTGAAGGATGCAAGGCGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGACCAAACAGCCACTGGGCCTCATGCGAGGTAGAAATAG-CTGCATACGTCATCCTCCCATGATGTGGTCAGCAGGTAAAGTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAACTGAGCTGGGGCGCAGCCGCCTGTCTGCACAGGCAGCACCATGTTGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCTGGGGTGGAGATCTGGGCCTGGA-GTGGAGATCTGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATA i nomLeu3.chr10 C 0 I 58 s rheMac3.chr19 60521506 514 + 64156825 aaAATAGCCCATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAAAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGGTGGATATCTGGGCCTGGAGGTAAAGATATGGGCCTGAGGTGGAGATACGAGCCTGGAG-TGGAGATATGGGCCTGGAGTGGAGATA i rheMac3.chr19 I 2988 C 0 s macFas5.chr19 55621124 514 + 59248254 aaAATAGCCCATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAGTCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGCAATAGTGAAGGATGCAAGGTGTCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACAACCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCATGTGTTGGTGAGTCCCAGAAGGGAATCGAGGGAGGGAGCACTGGGGTGGATATCTGGGCCTGGAGGTAAAGATATGGGCCTGAGGTGGAGATACGAGCCTGGAG-TGGAGATATGGGCCTGGAGTGGAGATA i macFas5.chr19 I 2766 C 0 s papAnu2.chr19 47692715 514 + 51301725 aaaatagCACATGGAGAAGAGTTTGaatctcagaagaaaacaacaaaaatacgtCAAAAGTCTTTCATGTCAGCACAAAATTCAATCATCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGTAATAGTGAAGGATGCAAGGTGCCAATTCTAGTTGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCATGCAAGGCAGAAAGAGCCTGCGTACGTCATCCTCTCATGATGTGGTCAGCATGTAAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCTCGGAAGGGAATCGAGGGAGGGAGCACTGGggtggagatctgggcctggaggtAAAGATATGGGCCTGAGGTGGAGATAtgagcctggag-tggagatataGGCCTGGAGTGGAGACA i papAnu2.chr19 I 2712 C 0 s chlSab2.chr6 47373404 514 + 50890351 aaAATAGCACATGGAGAAGAGTTTGAATCTCAGAAGAAAACAACAAAAATACGTCAAAAGTCTTTCATGTCAGCACAAAATTCAATCCTCTCCTGTATGAGAGATTGGATCTGAGACGTGTTTTGAGTTGGTAATAGTGAAGGATGCAAGGTGTCAATTCTAGTCGGAACAATTTCCAGGAAGCCATGTTCCACTCTTGAGCAAACACCCACTGGGCCTCGTGCAAGGCAGAAAGAGCCTGTGTACGTCATCCTCTCATGATGTGGTCAGCATGTCAACTGCATGAGCCCCTCACAACATCCTGTGTGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGAGGGAGGGAGCACTGGGGtggatatctgggcctggaggtaaaggtataggcctgaggtggagatataggcctggAG-TGGAGATATGGGCCTGGGGTGGAGATA i chlSab2.chr6 I 2712 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=31742.000000 s hg38.chr19_GL949753v2_alt 450719 24 + 796479 TGGGCCTGGGGTGGAGATATGGGC s panTro4.chr19 59642875 24 + 63644993 TGGGCCTGGGGTGGAGATATGGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236688 24 - 106955855 CGGGCCTGGAGTGGAGATACGGGC i nomLeu3.chr10 I 58 C 0 s rheMac3.chr19 60522020 24 + 64156825 TAGGCCTGGAGTGGAGATATGGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621638 24 + 59248254 TGGGCCTGGAGTGGAGATATGGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693229 12 + 51301725 TGGGCCTGGAGC------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373918 24 + 50890351 TGAGCCTGGAGTGGAGACATGGGC i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56575482 11 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T a score=42744.000000 s hg38.chr19_GL949753v2_alt 450743 34 + 796479 CTGGAG-TGGAGATA-------------------------------------------------------------TGGGCCTGGAACTGTAGATA s panTro4.chr19 59642899 34 + 63644993 CTGGAG-TGGAGATA-------------------------------------------------------------TGGGCCTGGAACTGTAGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575493 95 + 60714840 CGGGGG-TGGAGATATGAGCCTGGAATGGAGACGTGGCCTTTGACGTAGAGATATGGGCCTGCACCCCCGAGATAGTGGGCCTGGAACTGTAGATA i ponAbe2.chr19 I 11 I 33 s nomLeu3.chr10 103236712 34 - 106955855 CTGGAG-TGGAGATA-------------------------------------------------------------TGGGCCTGGAACTGTAGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522044 33 + 64156825 CTGGGG-TGGAGATA-------------------------------------------------------------TGAGCCTGGAG-TGGAGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621662 33 + 59248254 CTGGGG-TGGAGATA-------------------------------------------------------------TGAGCCTGGAG-TGGAGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693241 27 + 51301725 -------TTTAGATA-------------------------------------------------------------TGGGCCTGGaa-tggagata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373942 34 + 50890351 CTGGAGCTTTAGATA-------------------------------------------------------------TGGGCCTGGAA-TGGAGATA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=10627.000000 s hg38.chr19_GL949753v2_alt 450777 13 + 796479 TGGGCCTGAAG---TA s panTro4.chr19 59642933 13 + 63644993 TGGGCCTGGAG---TA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103236746 13 - 106955855 TTGGCCTGGAG---TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522077 14 + 64156825 TGGGCCTGGAGCTT-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621695 14 + 59248254 TGGGCCTGGAGCTT-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693268 11 + 51301725 tgggcctggag----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373976 11 + 50890351 TGGGCCTGGAG----- i chlSab2.chr6 C 0 I 4 e ponAbe2.chr19 56575588 33 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T a score=-2989.000000 s hg38.chr19_GL949753v2_alt 450790 1 + 796479 -G s panTro4.chr19 59642946 1 + 63644993 -G i panTro4.chr19 C 0 I 155 s ponAbe2.chr19 56575621 1 + 60714840 -G i ponAbe2.chr19 I 33 C 0 s nomLeu3.chr10 103236759 1 - 106955855 -G i nomLeu3.chr10 C 0 I 20 s rheMac3.chr19 60522091 1 + 64156825 T- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621709 1 + 59248254 T- i macFas5.chr19 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47373987 4 + 50890351 I e papAnu2.chr19 47693279 0 + 51301725 C a score=51189.000000 s hg38.chr19_GL949753v2_alt 450791 39 + 796479 AGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTGT s panTro4.chr19 59643102 39 + 63644993 AGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTAT i panTro4.chr19 I 155 C 0 s ponAbe2.chr19 56575622 38 + 60714840 AGATATGGGCCTGGAGTGGATATATGGGCCTGG-ACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236780 39 - 106955855 AGATATGGGCCTGGAGTAGAGATATGGGCCTGGAACTGT i nomLeu3.chr10 I 20 C 0 s rheMac3.chr19 60522092 39 + 64156825 AGATATGGGCCTGGAATGGAGATATGGGCCTGGAGATAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621710 39 + 59248254 AGATATGGGCCTGGAATGGAGATATGGGCCTGGAGATAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693279 24 + 51301725 ---------------atagagatatgggcctggaggtgg i papAnu2.chr19 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47373987 4 + 50890351 I a score=99366.000000 s hg38.chr19_GL949753v2_alt 450830 54 + 796479 AGATATGGGCCTGGAGTGGAGATA---------------------------------------TTGGCTTGGA-GTGCAGATATGGACCTGGAA s panTro4.chr19 59643141 93 + 63644993 AGATATGGGCCTGGAGTGGAGATATTGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATGTTGGCTTGGA-GTGCAGATATGGGCCTGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575660 55 + 60714840 AGATATGGGCCTGGAGTGGAGATA---------------------------------------TGAGCCTGGAGGTGGAGATATGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236819 74 - 106955855 AGATATGGGCCTGGAGTGGAGATA--------------------TGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522131 54 + 64156825 AGATATGGGCCTGGAGTGGAGATA---------------------------------------CTGGCTTGGA-ATGCAAGTATGGGCCTGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621749 54 + 59248254 AGATATGGGCCTGGAGTGGAGATA---------------------------------------CTGGTTTGGA-ATGCAAGTATGGGCCTGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693303 54 + 51301725 agatgtgggcctggagtggagata---------------------------------------ttGGTTTGGA-GTGAAAATATGGGCCTGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47373991 54 + 50890351 AGATATGGGCCTGGAGTGGAGATA---------------------------------------TTGTCTTGGA-GTGCAAATATGTACCTGGAA i chlSab2.chr6 I 4 I 96189 e calJac3.chr22 45796358 26331 + 49145316 T a score=34351.000000 s hg38.chr19_GL949753v2_alt 450884 39 + 796479 TTG---------------------------------------AGATACGGGCCTGGAGGTGGAGATATGGGCCTAGAG s panTro4.chr19 59643234 59 + 63644993 AGGAGACATGGGCCTGGA-------------------GGTGGAGATACAGGCCTGGAGGTGGAGATATGGGCCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575715 39 + 60714840 TGG---------------------------------------AGATATGGGCCTGGAGGTGGAGATTTGGGCCTGGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236893 78 - 106955855 TGGAGATGTGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522185 23 + 64156825 ---------------------------------------TGAAGATACGGGCCTGGAGGTGG---------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621803 39 + 59248254 ---------------------------------------TGAAGATACAGGCCTGGAGGTGGAGATATGAGCCTGGAG i macFas5.chr19 C 0 I 20 s papAnu2.chr19 47693357 23 + 51301725 ---------------------------------------TGGAGATACAGGCCTAGAACTGT---------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47470234 39 + 50890351 ---------------------------------------TGGAGATATGGGTGTGGAGGTGGAGATATGGGCCTAGAG i chlSab2.chr6 I 96189 T 96228 e calJac3.chr22 45796358 26331 + 49145316 T a score=118369.000000 s hg38.chr19_GL949753v2_alt 450923 57 + 796479 TGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGG s panTro4.chr19 59643293 57 + 63644993 TGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575754 55 + 60714840 TGGAGATATGGGCCTGGA-GTGGAGATACGGGCCTGGAG-TGGAGATATGGGCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103236971 57 - 106955855 TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAACTGTAGATATGGGCTTAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522208 53 + 64156825 ---AGATATGGGCCTAGA-GTGTAGATAGGGGCCTGGAACTGTAGATATGGGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55621862 56 + 59248254 TGTAGATATGGGCCTGGA-GTGAAGATATGAGCCTAGAACTGTAGATATGGGCCTGG i macFas5.chr19 I 20 C 0 s papAnu2.chr19 47693380 53 + 51301725 ---AGATATGGGCCTGGA-GTGAAGATATGAGCCTGGAACTGTAGatatgggcctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374045 57 + 50890351 TGGAGATACGGGCCTGGAGGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGG i chlSab2.chr6 T 96228 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=89305.000000 s hg38.chr19_GL949753v2_alt 450980 133 + 796479 AGTAGAGATATGGGCCTGGAGTGGAGATGTTGGCTTGG-AGTGCAGATATGGGCCTGGAATGGAGACACGGGCCTGGAGGTGGAGATACAGGCCTGGAGGTGGAGATATGGGCCTGGAGTGTAGATATGGGCCT s panTro4.chr19 59643350 133 + 63644993 AGTAGAGTTATGAGCCTGGAGTGGAGATGTTGGCTTGG-AGTGCAGATATGGGCCTGGAATGGAGACATGGGCCTGGAGGTGGAGATACAGGCCTGGAGGTGGAGATATGGGCCTGGAGTGTAGATATGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575809 95 + 60714840 A--------------------------------------ACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGA-GTGGAGATATAGGCCTGGAGTGTAGATATGGGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237028 133 - 106955855 AGTGTAGATGTGGGCCTGGAGTGGAGATATGGGCCTGGAACTATAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55621918 113 + 59248254 -------------------AGTGGAGATATGGGTCTGG-AGTGGAGATACTGGCTTGGAATGCAAATATGGGCCTGGAA-TGGAGATACGGGCCTGGAGGTGGAGATATGGGCCTAGAGTGTAGATAGGGGCCT i macFas5.chr19 C 0 I 1 s chlSab2.chr6 47374102 76 + 50890351 -------------------AGTGGAGATATGGGCCTGG-A-------------------------------------AC-TGTAGATATGGGCCTGGAGGTGGAGATATGGGCCTAGAGTATAGATATGGGCCT i chlSab2.chr6 C 0 I 82757 e calJac3.chr22 45796358 26331 + 49145316 T e papAnu2.chr19 47693433 0 + 51301725 C e rheMac3.chr19 60522261 0 + 64156825 C a score=60941.000000 s hg38.chr19_GL949753v2_alt 451113 75 + 796479 GGA-GTAGAGATATAGGAC-AGAGGTGGAGATATAGGCCTGGA-GTGGAGATATGGGCCTGGAGTAGAGATATAGGAC s panTro4.chr19 59643483 76 + 63644993 GGA-GTAGAGATATAGGCCTGGAGGTGGAGATATAGGCCTGGA-GTGGAGATATGGGCCTGGAGTAGAGATATAGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575904 77 + 60714840 GGAGGTAGACATATGGGCC-TGGAGTGGAACTATGAGCCTGGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237161 76 - 106955855 GGA-GTGGAGATATGGGCC-TGGAGTGGAGATATGGACCTGGAACTGTAGATATGGGCCTGGAGTGGAGATATGGGCC i nomLeu3.chr10 C 0 I 1 s macFas5.chr19 55622032 57 + 59248254 GAA-CTGTAGATATGGGCC-TGGAGTGAAGATATGAGCCTGGAACTGTAGATATGGGCC------------------- i macFas5.chr19 I 1 I 1 s chlSab2.chr6 47456935 76 + 50890351 GGA-GTGGAGATATGGGTC-TGGAGTGTAGATATAGGCCTGGAACTGTAGATATGGGCCTGGGGTGAAGATATGAGCC i chlSab2.chr6 I 82757 T 82833 e calJac3.chr22 45796358 26331 + 49145316 T e papAnu2.chr19 47693433 0 + 51301725 C e rheMac3.chr19 60522261 0 + 64156825 C a score=-638.000000 s hg38.chr19_GL949753v2_alt 451188 3 + 796479 GGA- s panTro4.chr19 59643559 3 + 63644993 GGA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575981 3 + 60714840 TGG- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237238 3 - 106955855 GGA- i nomLeu3.chr10 I 1 C 0 s macFas5.chr19 55622090 2 + 59248254 -GG- i macFas5.chr19 I 1 C 0 s chlSab2.chr6 47374178 3 + 50890351 -GGA i chlSab2.chr6 T 82833 C 0 e calJac3.chr22 45796358 26331 + 49145316 T e papAnu2.chr19 47693433 0 + 51301725 C e rheMac3.chr19 60522261 0 + 64156825 C a score=47397.000000 s hg38.chr19_GL949753v2_alt 451191 21 + 796479 AGTGGAGATATGGGCCTGGAG s panTro4.chr19 59643562 21 + 63644993 GGTGGAGATATGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56575984 21 + 60714840 AGTGGAGGTATGGGCCTGGAG i ponAbe2.chr19 C 0 I 92 s nomLeu3.chr10 103237241 21 - 106955855 ACTGTAGATATGGGCCTGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522261 21 + 64156825 AGTGGAGATATGGGTCTGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622092 21 + 59248254 AGTGGAGATATGGGTCTGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693433 21 + 51301725 agtggagatatgggtctggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374181 21 + 50890351 ACTGTAGATATGGGTCTGGAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=183885.000000 s hg38.chr19_GL949753v2_alt 451212 112 + 796479 TGGAGATATGGGCCTGGAGGTG-----------------------------------------------------------ATGTACAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGGAGGGGCCCTGGCCACATGTGGGTGAGTCCTTCCCCC s panTro4.chr19 59643583 151 + 63644993 TGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGG--------------------AGTGGAGATATGGGCCTGGAGGTGATGTACAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGCCCTGGTCACATGTGGGTGAGTCCTTCCCCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103237262 170 - 106955855 TGGAGATATGGGCCTGGAACTGTAGATATGGGCCTGGAGCGGAGATCTGGGCCTGCAGGTGGAGACATGGGCCTGGAAGTGATGTACAGATGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGTGGGTGAGTCCTTCCCC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522282 111 + 64156825 TGGAGATATGGGCCTGGAGGTG-----------------------------------------------------------ATGTACAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCC- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622113 111 + 59248254 TGGAGATATGGGCCTGGAGGTG-----------------------------------------------------------ATGTACAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCTCC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693454 111 + 51301725 tggagatatgggcctggaggTG-----------------------------------------------------------ATGTACAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCCCC- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374202 111 + 50890351 TGGAGATATGGGCCTGGAGGTG-----------------------------------------------------------ATGTACAGATGGATCATCCATCATGATCTTTCTTTATAGGGTTCTTCTTGCTGCAGAGGGCCTGGTCACATGTGGGTGAGTCCTTCCAC- i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56576005 92 + 60714840 I e calJac3.chr22 45796358 26331 + 49145316 T a score=900724.000000 s hg38.chr19_GL949753v2_alt 451324 382 + 796479 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATGTTCCTGAAACGGGAGGCAGGCGACACAGGGGGTTGACTGATGGGCTGACCATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGCCAGGGGAAGCTTCG-CCACAGTTCTGTCCTAGCCCTCCCCGGCCTTTCTTTCCCTTGGCTGAGTCTGTGGGGACCCAGGGGGAGACTGAAGTGCTCAAAGGAGTGGTGTGCAGGGAGGAAGTGGTGTCACCGGCAGAGGAAGGGAGAGAAGCAGTGCAAGGAACAACAGGCCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCGTTTCCATGAC-GGTAGGGGCTGCAATGTGGCTGCTGTCATTCTACC s panTro4.chr19 59643734 382 + 63644993 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATGTTCCTGAAACGGGAGGCAGGTGACACAGGGGGTTGACTGATGGGCTGACCATGGGAAGCCATGTGGGAATCTCTCATGAGCTAGGAAAAGGAAGCCAGGGGAAGCTTCG-CCACAGTTCTGTCCTAGCCCTCCCCAGCCTTTCTTTCCCTTGGCTGAGTCTGTGGGGACCCAGTGGGAGACTGAAGTGCTCAAAGGAGCGGTGTGCGGGGAGGAAGTGGTGTCACCGGCAGAGGAAGGGAGAGAAGCAGTGCAAGGAACAACAGGCCTCTGAGGACAAGAGCATAATTCACACCCTCCAGCGTTTCCATGAC-GGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576097 383 + 60714840 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCCTGAAATGGGAGGCAGGCGGCACAGGGGATTGACTGATGGGCTGACCATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGTAACGGGAAGCTTGG-CCACAGTTCTGTCCTAGCCCTCCCCGGCCTTTCTTTCCCTTGGCTGAGTCTGTGGGGACCCAGGGGGAGACTGAAGTGCTCAAAGGAGCGGTATGCGGGGAGGAAGTGGTGTCACCGGCAGAGGAAGGGAGAGAAGCAGTGCAAGGAACAACAGGCCTCTGAGGACAAGAGCATAACTCACACTCTCCAGCGTTTCCATGACGGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC i ponAbe2.chr19 I 92 I 1 s nomLeu3.chr10 103237432 382 - 106955855 AAACCTTAGGTTGTCATCTCCCCACGTAAGATGATTTTCCGGAAACAGGAGGCAGGCAGCACAGGGGGTTGACTGATGGGCTGACCATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGTCATGGGAAGCTTAG-CCACAGTCCTGTCCTAGCCCTCCCCGGCCTTTCTTTCCCTTGGCTGAGTCTATGGGGACCCAGGAGGAGACTGAAGTGCTCAAAGCAGCGGTGTGCAGGGAGGAAGTGGTGTCACCAGCAGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGCCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCGTTTCCATGAC-GGTAGGGGCTGCGGTGTGGCTGCTGTCATTCTACC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60522393 382 + 64156825 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACATGAGGCAGGCAGCACAAGGGGTTGACTGATGGGATGACGATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCCCTGTTCTTTCTTTCCCTTGGCTGAGTCTGTGGGGACCCTGGGGGAGACTGGAGTGCTCAAAGCAGCAGTGTGTGGGGAAGAAGTGGTGTCACCGACAGAGGAAGGGAGGGAAGCAGTGCAA-GAACAGCCAGCCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACC i rheMac3.chr19 C 0 I 11 s macFas5.chr19 55622224 382 + 59248254 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACATGAGGCAGGCAGCACAAGGGGTTGACTGATGGGATGACGATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCCCTGTTCTTTCTTTCCCTTGGCTGAGTCTGTGGGGACCCTGGGGGAGACTGGAGTGCTCAAAGCAGCAGTGTGTGGGGAAGAAGTGGTGTCACCGACAGAGGAAGGGAGGGAAGCAGTGCAA-GAACAGCCAGCCTCTGAGGACAAGAACGTAACTCACACCCTCCAGTGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47693565 382 + 51301725 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACACGAGGCAGGCAGCACAAGGGGTTGACTGATGGGATGACGATGGGAAGCCATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCcctgttctttctttcccttggCTGAGTCCTTGGGGACCCTGGGGGAGACTGGAGTGCTCAAAGCAGCGGTGTGCGGGGAAGAAGTGGTGTCACCagcaaaggaagggagggaagcagtGCAA-GAACAGCAGGCCTCTGAGGACAAGAGCATAACTCACACCCTCCAGCATTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374313 382 + 50890351 AAACCTTAGGTTGTCATCTCCCCACATAAGATGATTTTCTTGAAACACGAGGCAGGCAGCACAAGGGGTTGACTGATGGGATGACGATGGGAAGCTATGTGGGAATCTCTCATGAACTAGGAAAAGGAAGCCATGGGAAGCTTGGCCCACAGTTCTGTCCTAGCCCTCCTTGTTCTTTCTTTCCCTTGGCCGAGTCTGTGGGGACCCTGGGGGAGACTGGAGTGCTCAAAGCAGCGGTGTGCGGGGAAGAAGTGATGTCACCGGCAGAGGAAGGGAGGGAAGCAGTGCAA-GAACAGCAGGCCTCTGAGGACAAGAGCGTAACTCACACCCTCCAGCGTTTCCATGAT-GGTCGGGGCTGCAGTGTTGCCGCTGTCATTCTACC i chlSab2.chr6 C 0 I 11 e calJac3.chr22 45796358 26331 + 49145316 T a score=6376.000000 s hg38.chr19_GL949753v2_alt 451706 9 + 796479 TAAGAGGTG s panTro4.chr19 59644116 9 + 63644993 TAAGACGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576481 9 + 60714840 GAAGAGGTG i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103237815 9 - 106955855 GAAAAGGTG i nomLeu3.chr10 I 1 C 0 s macFas5.chr19 55622606 7 + 59248254 --AGAAGCG i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47693947 7 + 51301725 --AGAAGCG i papAnu2.chr19 C 0 I 4 e calJac3.chr22 45796358 26331 + 49145316 T e chlSab2.chr6 47374695 11 + 50890351 I e rheMac3.chr19 60522775 11 + 64156825 I a score=545572.000000 s hg38.chr19_GL949753v2_alt 451715 232 + 796479 GGGGAACCACAGTCATGACCCTGACATTCCAGATCTTCTAATAGGGGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGA-----------------TCATGCCCTCCATCCTGTGTCTACCTTGTGTTCTTTTATGTAAGTAATTTTGCAGTGTTAAAATCTAGTAAGAGTCGCTTCTTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTG--CTGTAGGGAGACGCCATGTCTATGCGGGATGGGTC s panTro4.chr19 59644125 232 + 63644993 GGGGAACCACAGTCATGACCCTGACATTCCAGATCTTCTAATAGGAGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGA-----------------TCATGCCCTCCATCCTGTGTCTACCTTGTGTTCTTTTATGTAAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCGCTTATTCAGCACTTGCTTAAAGTTCTCAGCTGACACTTG--CTGTAGGGAGACGCTATGTCTATGCGGGGTGGGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576490 232 + 60714840 GGGGGACCACAGTCATGACCCTGACATTCCAGATCTTCTAATAGGGGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGA-----------------TCATACCCTCCATCCTGTGTCTACCTTGTGTTCTTTTATGTCAGTAATTTTGCAGTATTAAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTG--TTGTAGGGAGACACCATGTCTATGTGGGATGGGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103237824 232 - 106955855 GGGGAACCACAGTCATGACCCTGACATTCCAGATCTTCTAATGGGGGCTCAGCTGTTTATTATGGTTCATGCATTAGCTGA-----------------TCATGCCCTCCATCCTGTGTCTACTTTGTGTTCTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGCTTCTTCAGCACTTGCTCAAAGTTCTCAGCTGACATTTG--TTGTAGGGAGATGCCATGTCTATGCGGGATGGGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60522786 251 + 64156825 GGGGAACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTT i rheMac3.chr19 I 11 C 0 s macFas5.chr19 55622617 251 + 59248254 GGGGAACCACAGTCATGATCCTGACATTTCAGATCTTCTAATGAGGGCTTAGTTGTTTATTTTGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTTTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTCACTTATTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTGTAGGGAGATGCCATGTCTATGCGAGATGGGTT i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47693958 251 + 51301725 GGGGAACCACAGTCATGACCCTGACATTTCAGATCTTCTAATGAGGGCTCAGTTGTTTATTATGGTTCATGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTactttgtgttgttttatgtGAGTAATCTTGCAGTATTGAAATCTAGTAAGAGTCGCCTATTTAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTATAGGGAGACGCCATGTCTATGAGGGATGGGTT i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47374706 251 + 50890351 GGGGAACCACAGTCATGACCCTGACATTTCAGATCTTCTAATGAGGGCTCAGTTGTTTATTATGGTTCGTGCATTAGCTGATATTCCATTCACAAAGGTCATGCCCTCCATCCTGTGTCTACTTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTAAGAGTGGCTTATTTAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTCTTATAGGGAGACGCCATGTCTATGTGGGATGGGTT i chlSab2.chr6 I 11 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=105629.000000 s hg38.chr19_GL949753v2_alt 451947 40 + 796479 CTTCCTGTAGCCC---------TGGGCACCCAGGTGTGGTAGGAGCCTT s panTro4.chr19 59644357 40 + 63644993 CTTCCTGTAGCCC---------TGGGCACCCCGGTGTGGTAGGAGCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576722 40 + 60714840 CTTCCCATAGCCC---------TGGGCACCCAGGTGTGGTAGGAGCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238056 40 - 106955855 CTTCCTGTAGCTC---------TGGGCACCCAGGTGTGGTAGGAGCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523037 40 + 64156825 CTTCCTGTAGCCC---------TGGGCACCCAGGTGTGGTAGGAGCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622868 40 + 59248254 CTTCCTGTAGCCC---------TGGGCACCCAGGTGTGGTAGGAGCCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694209 40 + 51301725 CTTCCTGTAGCCC---------TGGGCACTCAGGTGTGGTAGGAGCCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374957 40 + 50890351 CTTCCTGTAGCCC---------TGGGCACCCAGGTGTGGTAGGAGCCTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102592159 48 + 122678785 CTCCCTTTAACCCTTTTGTGAGTTGGTAGCAGGGTG-AGTGGGTTCTCT i canFam3.chr1 N 0 C 0 e calJac3.chr22 45796358 26331 + 49145316 T a score=198946.000000 s hg38.chr19_GL949753v2_alt 451987 82 + 796479 AGAAACG--------------------------TGGAAA-T-GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCC----TCTCT-AAGGTAGTGCCTCCT s panTro4.chr19 59644397 82 + 63644993 AGAAATG--------------------------TGGAAA-T-GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCTTCC----TGTCT-AAGGCGGCGCCTCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576762 83 + 60714840 AGAAACG--------------------------TGGAAA-TGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACGTCCTTC----TCTCT-AAGGTAGTGCCTCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238096 83 - 106955855 AGAAACA--------------------------TGGAAA-TGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCTTCC----TCTCT-AAGGTAGTGCCTCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523077 85 + 64156825 AGAAATG--------------------------TGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCC----TCTCTAAAGGCTGTGCCTCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622908 85 + 59248254 AGAAATG--------------------------TGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCC----TCTCTAAAGGCTGTGCCTCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694249 85 + 51301725 AGAAATG--------------------------TGGAAAGTGGGGAGAATCTTCTGagcacagggagggaggggctgctTCACATCCTCC----TCTCTAAAGGCTGTGCCTCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47374997 85 + 50890351 AGAAATG--------------------------TGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCTGCTCCACATCCTCC----TCTCTAAAGGCGGTGACTCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770027 81 + 49145316 AGAACAG--------------------------TGGGAA--GAAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCC----TCTCT--AGGCTGCGCCTCCT i calJac3.chr22 T 26331 C 0 s canFam3.chr1 102592207 105 + 122678785 AGAAGGGATATACCTGAAGAGTTTCCTAGCTCTTAGGAGGTGGGGGGAATCTTCCTACCCCCATGGTCAA----------CACACTTTCCATGGTCTTTAACACCAGAGCTCTCT i canFam3.chr1 C 0 N 0 a score=781427.000000 s hg38.chr19_GL949753v2_alt 452069 302 + 796479 TCTCCCCCAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCGGCACTGTGGTGTCTGAAGGACAACATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAATATTCCGGAACAGCTTTCTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--TGCAGTTCACACCCACACTCCCCCACTGGGTGGTCGGCA---CCCAGCAACCCTGTGGTGATCATGGTCACAGGTCAGAG s panTro4.chr19 59644479 302 + 63644993 TCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTGAAGGACAACATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAATATTCCGGAACAGCTTTCTCATGGGCCCTGTGACCCCAGCACATGCAGGAACCTACAGATGT--TGCAGTTCACACCCACACTCCCCCACTGGGTGGTCGGCA---CCCAGCAACCCTGTGGTGATCATGGTCACAGGTCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56576845 302 + 60714840 TCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTGAAGGAGAACATGTGTCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACAAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACGGAGTATTCCAGAACAGCTTCCTTATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--TGGGGTTCACACCCACACTCCCCCACTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238179 302 - 106955855 TCTTCCCCAGGTGGTCAGGACAGGCCCTTCCTCTCTGCCTGGCCCAGCACTGTGGTGTCTCAAGGAGAACACGTGACTCTTCAGTGTCACTGTCGTCTTGGGTCTAACAAATTCAGTCTGTCCAAGGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCTGGAACAGCTTCCTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGT--CGGGGTTTTCACCCACACTCCCCCACTAGGTGGTCGGCA---CCCAGCAACCCCGTGGTGATCATGGTCACAGGTCAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60523162 302 + 64156825 TCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55622993 302 + 59248254 TCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGCACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694334 302 + 51301725 TCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCCGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTACCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCTCGGCACACGCAGGGACCTACAGATGT--CGGGGTTCACACCTGAACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375082 302 + 50890351 TCTCCCCCAGATGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGTGCTGTGGTGCCTCAAGGAGAACACGTGAGTCTTCAGTGTCACTCTCATCTTGGGTTTACCATCTTCAGTCTGTACAAGGAAGATGGGGTGCCTGCCCCTGAGCTCTACAACAGAAGATTCTGGAAGGACATCCTCCTGGGCCCTGTGACCCCAGCACACGCAGGGACCTACAGATGT--CAGGGTTCACACCTGAACTCCCCCACTGAGTGGTCGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770108 299 + 49145316 CCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCACACTGGCCGTTCC---AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAG i calJac3.chr22 C 0 I 925 a score=1348449.000000 s hg38.chr19_GL949753v2_alt 452371 592 + 796479 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGgtgtccatcagggtccaatcatccaggcccagactgtatttggggtaaagggggattcagtacagagaaatagttgctgtggtgggaagaataattgtccccagtgatggctacatggtaatccatgaaccctgtgactatttatgtcatagggcaggggactgaaggggaagatggagctcaggttgttgatgggttgaccttgcgatggggagacagcctggactgtcctgctgtgctcagagtaatcacaagggtcctcatgagaggaggaggaagaggaaagtgggg-ttagagcaacgtcgtgggagggagactccatcagccacagcgggctttgaagatgggggaaggccatgagccacaaaggcagttggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgtagatgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcattgtattctctcctgcc-ccatg s panTro4.chr19 59644781 592 + 63644993 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGCGtccatcagggtccaatcatccaggccccgactgtatttggggtaaagggggattcagtacagagaaatagttgctgtggtgggaagaataattgtccccagtgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagaaggggagacagcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgagaggaggaggaagaggagagtgggg-ttagagcaacgtcgtgggagggagactccatcagccacagcgggctttgaagatgggggaaggccatgagtcacaaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacaaccctgcagatgccttgattttagcccagagagaactgggcccgatttctgttctccagaagtggaaggggtcattgtattctctcctgcc-ccatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577147 594 + 60714840 GCTTTCTGTCTGGGCTTCTCACTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCATCAGGGTCCGATCATCCAGGCCCTGACTgtatttggggtaaagggggattcagtacagagaaataggtgctgtggtgggaagaataattgtccccagtgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaaggtggagctcagtttgttgatgagttgaccttgagatggggagacagcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgacaggaggaggaagaggagagtggggattagagcagcgtagtgggagggagactccatcagccacagtgggctttgaagatgggggaaggccatgagccacaaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcgttgtattctctcctgccgccatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103238481 594 - 106955855 GCTATCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGACATCCATCAGGGTCCGATCATCCAGGCCCCGACTCTATTTGGGGTAAAGGGGGATTCAGTACAGAGAAATAGGTGCTATGGtgggaagaataattgtccccaatgatggctacatggtaatccatggaccctgtgactatttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttaagatggggagatggcctggactgtcctgctgtgctcagtgtaatcacaagggtcctcatgagaggaggaggaagaggagagtggggattacagcatcgtagtgggagggagactccatcagccacagcgggctttgaagatggaggaaggccatgagccacaaaggcaggtggcctctaagggctggagaagtcaagggaactgattcttccctgagtctccagaggaaacacagccctgaagacgccttgattttagcccagagagaactgggtccgatttctgttctccagaagtggaaggggtcATTGTATTCTCTCCTGCCACCATG i nomLeu3.chr10 C 0 M 8807 s rheMac3.chr19 60523464 584 + 64156825 GGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaaaaataggtactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagact--------cactacaggctttgaaggtgaaggaaggccacgaaccatgaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattc-tccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55623295 584 + 59248254 GGCTCCTGTCTGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTAGGGTAAAGggggattcagtacagaaaaatagatactgtggtgggaagaataattgtccccagttatggctacatggtaatcagtggaccctgtgactctttatgttatagggcaggggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagacgtcctggactgtcccactgggctcagtgtaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagaacagcatagtgggagggagact--------cactacaggctttgaaggtgaaggaaggccacgaaccatgaaggcaggtgg-ctctaagggctggagaagtcaagggaactgattc-tccctcagtctccagtggaagcacagccctgcagatgccttgattttagcccagagagaactgggtcagatttctgttctccattagtagaaggggttattgtattctctcctgccaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47694636 585 + 51301725 GGCTCCTGTCTGGGCTTCTCCTTGTCCCAACTCCTGAATCCCCGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTATTTGGGGTAAAGGGGGATTCAGTACAGAAAAATAGGTACTGTGATGGGAAGAAAAATTGTCCCTAGTTATGGCTACATGATAATCCGTGGACCCTATGACTGTTTATGTTATAGGGCAGAGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTGATGAGTtgaccttgagatggggagacGACCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGCACCACatgagaggaggaggatgaggagagtGGGGATTAGAGCAGCATAGTGGGAGGGAGACT--------CACTACAGGCTTTGAAGGTGAAGGAAGGCCACGAGCCATGAAGGCAGGTGGCCTCTAAGGGCTGGAGAAGTCAAGGGAACTGATTC-TCCCTGAGTCTCCAGTGGAAGCACAGCCCTGCAGATGCCTTGGTTTTAGCCCAGAGAGAACTGGGTCAGATTTCTGTTCTCCATAAGTGGAAGGGGTTATTGTATTCTCTCCTGCTACCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375384 585 + 50890351 GGCTCCTGTCTGGGCTTCTCCTTGTCCCATCTCCTGAATCCCAGAGCTTCTGCTGGGGgtatccaccagggtcccatcacccaggacctgactgtatttggggtaaagggggattcagtacagagaaataggtactgtgatgggaagaataattgtccctagttatggctacatggtaatccgtggaccctatgactatttatgttatagggcagaggactaaaggggaagatggagctcaggttgttgataagttgaccttgagatggggagacggcctggactgtcccgctgggctcagtggaatcacaagggaccacatgagaggaggaggatgaggagagtggggattagagcagcacagtgggagggagact--------cactacaggctttgaaggtgaaggaaggccacgagccatgaaggcaggtggcctctaagggctagagaattcaagggaactgattc-tccctgagtctccagtggaagcacagccctgcagattccttgattttagcccagagagaactgggtcagatttctgttctcctttagtggaaggggttattgtattctctcctgccaccgtg i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770407 925 + 49145316 I a score=1076195.000000 s hg38.chr19_GL949753v2_alt 452963 591 + 796479 tttgtgacaattttctccagcagcaacaggaaaccaacacaggaacccaggtgaagcacaagttaagaaaccaaacaaggagaaggttggctacactgattttagcatgggtgggatactgatgctaccaccaggctcgatccacatagggaggggttgatgctcctggaaccagcaccaggggccaccctatggaagctggggccatggagAAGGCACAGACATGACAGGAGAGGCTCCCAATCCCCATCAGGAACAGGGACACTGATGCCTGCCTTACTGATGAGTTCGTACCTCCTGCCAGCCTTTCCAATCTGTCCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCACCCCCACATAAACACCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCATAAGAGGTGACACTGAGCACAGTGGGAAGGGAATCAGGGCTACTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCAACAGGGGTTATGGGCAC--AAAAGAACACGGAGACACAGAGAGGAAGGAGAGAGATAGACACCATG s panTro4.chr19 59645373 591 + 63644993 tttgtgacaattttctccagcagcaacaggaaaccaacacaggaacccaggtcaagcacaagttaagaaaccaaacaaggagaaggttggctacactgattttagcacgggtaggatactgatgctaccaccaggctcgatccacatagggaggggttgatgctcctggaaccagcaccaggggccaccctatggaagctggggccatggagAAGGCACAGACATGACAGGAGAGGCTCCCAATCCCCATCAGGAACAGGGACACTGATGCCTGCCTTACTGATGAGTTCGTACCTCCTGCCGGCCTTTCCAATCTGTCCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGGACATGCAGCCTGTCGTAGTTCCTCTTCCACCCCCACATAAACACCAGGAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGGTGACGCTGAGCACAGTGGGAAGGGAATCAGGGCTACTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCAACAGGGGTTATGGGCAC--AAAAGAACACGGAGACACAGAGAGGAAGGAGAGAGATAGACACCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56577741 592 + 60714840 tttgtgataattttctccagcagcaacaggaaaccaacacaggaacccaggtgaaggacaagttaagaaaccaaacaaggagaa-gttggctacactgattttagcacgggtgggatactgatgctaccaccaggctcgatccacatagggaggagttgatgctcctggaaccagcaccaggggccaccttatggaagctggggccaTGGAGAATGCACAGACATGACAGGAGAGGCTCCCAATCCCCATCAGGAACGGGGACACTGATGCCTGCCTTACTGATGAGTTCATACCTCCTGCCGGCCTTTCCAATCTGTCCAAAAGAGATTGATTCAGGCTGCTAAGAGCCTGAACATGCAGCCTGTCGTGGTTCCTCTTCCACCCCCACATAAACACCAGGAAAGAGATTAGTGGGAAAGAGATACAACAGCCTAAGAGATGACGCTAAGCACAGTGGGAAGGGAATCAGGGCTACTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGCAGGGACCTGCACCAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGAGAGGTAGGAGAGAGATAGACACCATG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524048 592 + 64156825 tttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagttaagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAGGGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAGGGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCA-GGGTTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATAGACACCATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55623879 592 + 59248254 tttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaggtcaaggacaagttaagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacagaggaaggggttgattctcctggaaccagcactaggggccaccctatggcagctgggaccacggaaaaggcacagacatggcaggagAGGCTCCCAACCCCCATCAGGAACAGGGACATTGGTACCTGCCTTACTGATGAGTTCACACCTCCTGCCAGCCATTCCCATTTGTCCAAAAGAGATTGATTCAGGCTGCTGAGAGCCTGGACATGCAGCCTGTCGTGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAGGGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCA-GGGTTATGGGCACAGAAAAGAACATGGAGACACAGACAGGGAGGAGAGAGATAGACACCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47695221 593 + 51301725 TTTGTGATAATTTtctacagcagcaacaggaaaccaacacaggaacTCAGGTCAAGGACAAGTTAAGAAACCAAACAAGGAGAAGGTTGGCTACACTGATTTCAGCACAGGTGGAATACTGTTGCTACCACCAGGCTTGATCCACACAGGGAGGGGTTGATTCTCCTGGAACCAGCACCAGGGGCCACCCTATGGCAGCTGGGACCATGGAAAAGGCACAGACTTGGCAGGAGAGGCTCCCAACCCCCATCAGGAACAGGGACATTGATGCCTGCCTTACTGATGAGTTCACACCTCCCGCCAGTCATTCCAATTTGTCCAAAAGAGATTGATTCAAGCTGCTGAGAGCCTGGACGTGCAGCCTGTCATGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTgggaagggaatcaggggtcctagagacagagagacagggaagagggagggagacagatggagggACCTGCACCAGGGGTTATGGGTACAGaaaaaaaCATGGAGACACAGACAGGGAGGAGAGAGATGGACACCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47375969 593 + 50890351 tttgtgataattttctacagcagcaacaggaaaccaacacaggaactcaagtcaaggacaagttaagaaaccaaacaaggagaaggttggctacactgatttcagcacaggcggaatactgatgctaccaccaggctcgatccacacagggaggggttgattctcctggaaccagcaccaggggccaccctatggcagctgggaccatggaaaaggcacagacatggcaggagAGGATCCCAACCCCCATCAGGAACAGGGACATTGATGCCTGCCTTACTGATGAGTTCACACCTCCCGCCAGCCATTCCAATTTGTCCAAAAGAGATTGAGTCAGGCTGCTGAGAGCCTGGACGTGCAGCCTGTCATGGTTCCTCTTCCAGCCCCACATAAACACCAGCAAAGAGATTAGTGGAAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAATCAGGGGTCCTAGAGACAGAGAGACAGGGAAGAGGGAGGGAGACAGATGGAGGGACCTGCACCAGGGGTTATGGGCACAGAAAAGAACACGGAGACACAGACAGGGAGGAGAGAGATAGACACCATG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45770407 925 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=353852.000000 s hg38.chr19_GL949753v2_alt 453554 168 + 796479 GAGGGGAAGCCTCACTTATTTCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCTTCTGAACTCA-CAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCGGGAGAGACGGTCATCCTGCAATGTTGGTCAGA s panTro4.chr19 59645964 168 + 63644993 GAGGGGAAGCCTCACTTATTTCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCTTCTGAACTCA-CAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCGGGAGAGACGGTCATCCTGCAATGTTGGTCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578333 168 + 60714840 GAGCGGAAGCCTCACTTATTTCAGGTCCCATGAATGGGATGAGAAAGGGAGACACCTTCTGAACTCA-CAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGGTCAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524640 168 + 64156825 GAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCA-CAACCTCTCTTCTTAGGAGTCTACAGAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55624471 168 + 59248254 GAGGGGAAGTCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCA-CAACCTCTCTTCTTAGGAGTCTACAGAAAGCCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGATGGTCGTCCTGCAATGTTGGTCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47695814 168 + 51301725 GAGGGGAAGCCTCACTTATTCCAGGTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCA-CAACCTCTCTTCTTAGGAGTCTACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTGCAATGTTGGTCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376562 168 + 50890351 GAGGGGAAGCCTCACTTATTCCAGTTCCCATGAATGGGATGAGAAAGGGAGACGCCATCTGAACTCA-CAACCTCTCTTCTTAGGAGTCTACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCATCCTGCAATGTTGGTCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771332 164 + 49145316 GAGGGAGAGCTTCAC---CCTGAGGTCCCAGGTGAGGGGTGAGGAA-GGAGAC-CCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGA i calJac3.chr22 I 925 I 973 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=184333.000000 s hg38.chr19_GL949753v2_alt 453722 96 + 796479 TGTCAGGTTTGAGCGCTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCGCCTCATTGGACAGCTCCACGATGCGGGTTCCCAGGTCAA s panTro4.chr19 59646132 96 + 63644993 TGTCAGGTTTGAGCGCTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCGCCTCATTGGACAGCTCCACGATGCGGGTTCCCAGGTCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578501 96 + 60714840 TATCAGGTTTGAGCACTTCCTTCTGCACAGAGAGGGGACCACTGAGGACCCCTTGCGCCTCGTTGGAGAGCTCCACGATGCAGGTTCCCAGGTCAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524808 96 + 64156825 TATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55624639 96 + 59248254 TATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCACTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47695982 96 + 51301725 TATGAGGTTTGAGCATTTCCTTCTGCACAGAGAGGGGATCACTGAGGACCCCTTGCACCTCATTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376730 96 + 50890351 TATGAGGTTTGAGCGTTTCCTTCTGCACAGAGAGGGGATCACTAAGGACCCCTTGCACCTCGTTGGACAGCTCCATGATGGGGGTTCCCAGGCCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772469 94 + 49145316 --TCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAA i calJac3.chr22 I 973 T 965 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=276339.000000 s hg38.chr19_GL949753v2_alt 453818 124 + 796479 CTATTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTTTGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGGTCGTAGGTGAG s panTro4.chr19 59646228 124 + 63644993 CTACTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTTTGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGGTCATAGGTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578597 124 + 60714840 CTATTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTTTGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524904 124 + 64156825 CTCTTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55624735 124 + 59248254 CTCTTCCGTGGGGCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47696078 124 + 51301725 CTATTCCGTGGGTCCCATGATGCCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGATCCACTGGACATCGTGATCATAGGTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376826 124 + 50890351 CTATTCCGTGGGTCCCATGATACCTGCCCTTGCAGGGACCTACAGATGTTTTGGTTCTGTCGCTTACTCCCCCTATGAGTGGTCGGCTCCCAGTGACCCTCTGGACATCGTGATCATAGGTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771598 124 + 49145316 CTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAG i calJac3.chr22 T 965 I 637 e nomLeu3.chr10 103239075 8807 - 106955855 M a score=1928225.000000 s hg38.chr19_GL949753v2_alt 453942 1088 + 796479 AGAATACAGACCTGCCTCTCACCCTTGCTGGGAGATGGAGTGAATGATCTAGGACTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGGTTCCTATGGAGAGAAAGTGACTTGGTGAGGTCTGTACCAACAAAGGCAGAGAAACAGGAGACACAAGTACAGACCTCATGTCATAACATAGAAGCCAGACACAGGGGCCATACAAGGTGTTAGAAAAAGAGATAAAGAGGT-AAAGAAGA--CACAGAGAGACAGATATATCCCAGAGAGAGGTGTCCTTCTATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCTACAAAGTGTTCTCTCCCAGGAGAACCCAAAGAGACACATCTATCTGGCCTGAGTTGGGCCGTGTGGCCCCAGGCTGGTGGCACCTACAGATGCTGTGTTTATTCTTAAACCTCTGCCTTCCGTGCAGTGGAGCTGTCGTCGTCGCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGTTGTGAGTTCCTGGAGTCCCCATACTGGATTCTGAGGCTCATATTCAAATAGCACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAATCAAAAAGCAAAGACATGAACACACACACAGAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACACATAAAGAGATAGAAAAAGAGGGCAGAGAAGTGGAGCGTATGATGGAAGGAAGCAGAGAAAAGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAGACAGGGAAAGATAAAGATGTGGGGATGGATTGCAGAGACTCCAAAAGGGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGAGAGAGACagatgatagatggatagatagatatagatagatgaaagataaaaggtagatgatagataatagagagacaggtgatagacaaatagatgatgaatg------actgatagatgatatagatagacaagt--------agaaagacagacagatgatatataaatagatatagagagatagaa----aga s panTro4.chr19 59646352 1080 + 63644993 AGAATACAGACCTGCCTCTCACCCTTGCTGGGAGAGGGAGTGAATGATCTAGGACTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGGTTCCTATGGAGAGAAAGTGACTTGGTGAGGTCTGTACCAACAAAGGCAGAGAAACAGGAGACACAAGTACAGACCTCATGTCATAACATAGAAGCCAGACACAGGGGCCATACAAGGTGTTAGAAAAAGAGATAAAGAGGT-AAAGAAGA--CACAGAGAGACAGACATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCTACAAAGTGTTCTCTCCCAGGAGAACCCAAAGAGACACATCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGGCTTGTGTCACCTACAGATGCTGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACCGGATTCTGAGGCTCATATTCAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAATCAAAAAGCAAAGACATGAACACACACACAGAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACACATAAAGAGATAGAAAAAGGGGGCAGAGAAGTGGAGCGTATGATGGAAGGAAGCAGAGAAAAGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGTTGGATTGCAGAGATTCCAAAAGGGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGAGAGagacagatgatagatgggtagatagatatagatagatgaaagataaaaggtagatgatagataatagagagataggtgatagataaatagatgatgaatg------acagatagatgatatagatagataagt------------agacagacagatgatatataaatagacatagagagat--------aga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56578721 1100 + 60714840 AGAATCCAGACCTGCCTCTCACCCTTGCTGGGACAGGGAGTGAATGATCTAGGATTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGGTTCCTATGGAGAGAAAGTGACTTGGTGAGGTCTGTACCAACAAAGGCAGAGAAACTGGAGACACAAGTACAGACCACATGTCATAACATAGAAGCCAGACACAGGGGCCACACAGGGTGTTAGAAAAAGAGATAAAGAGGT-AAAGAAGA--CACAGAGAGACAGACATGTCCCAGAAAGAGGTGTCCTTCCATGTTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGATTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACATCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGGCTTGTGGCACCTACAGATGCTGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCATCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACAGCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATTCAAATAACACCACATGTTATAGGATTGCTGAGAACAAAAGCCCACAGAGAGACACGGACTGAAATCAGGGAAATCAAAAAGCAAAGACATGAACACACACACAGAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACACATAAAGAGATAGAAAAAGAGGGCAGAGAAGTGGAGCATATGATGGAAGGGAGCAAAGAAAAGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAAAGGGAACTAGAGAGACTGAGAGGCAGAGAAAGACAAGGAGATGGAGAGAGACagatgatagatggatagatagatatagatagatgaaagataaaagatagatgatagataatagagagataggtgatagataaatagatgatgaatg------actgatagatgatatagatagataagcagatagatagaaagacagacagatgttatataaatagacatagagagatagaAAGACAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60525028 1076 + 64156825 AGAATCCAGACCTGCCTCTCACCCTTGCAGGGACAGGGAGTGAATGATCTAGCACCGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCGCACATCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGAAAAGAGATAAAGAGGT-AAAGAAGACACACAGAGAGACAGACATGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGACCCTGTGGCCCCAGGCTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATTCAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAGAA----AAGGAGAAGGagaaagacagatga--------tagatagatataaatggatgaaagataagagatagatgatagataacagagggataggtgatagataaatagatGATGAATG------ACTGATagacgatatagagagagaagt--------agatagatagacagatgatacataaagagacatagagagacagaa----aga i rheMac3.chr19 C 0 I 4867 s macFas5.chr19 55624859 1076 + 59248254 AGAATCCAGACCTGCCTCTCACCCTTGCAGGGACAGGGAGTGAATGATCTAGCACCGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCACACATCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGAAAAGAGATAAAGAGGT-AAagaagacacacagagagacagacaTGTCCCAGA-AGAGGTGTCCTTCCATGCCGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCTGTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGGCTTGTGGCACCTACAGATGCCATGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATTCAAATAACACCACATGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAAAATGAGCCAGAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACGAAAACAGGGAAAGATAAAGATGTGGAGATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGTGAGGCAGAGAA----AAGGAGAAGGagaaagacagatga--------tagatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataaatagatgatgaatg------actgatagacgatatagatagagaagt--------agatagatagacagatgatacataaagagacatagagagacagaa----aga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47696202 1083 + 51301725 AGAATCCAGACCTGCCTCTCACCCTTGCAGGGACAGGGAGTGAATGATCTGGGACTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACACAAGTACAGACCACACGTCATAACGTAGAAGCCAGACACAGGGACCATACAGCGTGTTAGGaaaagagataaagaggt-aaagaagacacacagagagacagacatgtcccagagagagaTGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCTTGTGGCCCCAGGCTTGTGGCACCTACAGATGCCATGTTTTTTCTTaaacctctgccttccatgcAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATTCAAATAACACCACACGTTATAGGATTACTGAGAACAAAAGCCCACAGAGAGACATGGAGTGAAATCAGGGAAATCAAAAAGCgaagacatgaacacacacacagaatgagcCAGAAGAAGGGAATTGAGAGACTCACAGACacataaagagatagaaaaagagggCAGAGCAGT-GAGCATATGATGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAGGGAGGGGCACAAAAACAGGGAAAGATAAAGATGTGGGGATGGATTGCagagatgccaaaagagaactagagagactgagaggcagagaa----aaggagaaggagaaagacagacga--------tagatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataaatagatgatgagtagacgatatagatagatgatatagatagagaagt--------agatagatagacagatgatacataaatagacatagagagacagaa----aga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47376950 1065 + 50890351 AGAATCCAGACCTGCCTCTCA-CCTTGCAGGGACAGGGAGTGAATGATCTAGGACTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTCATGGAGAGAAAGTGACTTCATGAGGTCTGTACCAACAGAGGTAGAGAAACAGGAGACATAGGTACAGACTGCACGTCATAACATAGAAGGCAGACACAGGGGCCATACAGGGTGTTAGGAAAAGAGATAAAGAGGTAAAAGAAGACGCACAGAGAGACAGACATGTCCCAGAGAGAGATGTCCTTCCATGCTGACTTTGTTCAGAGACCAGGCACAGGTTAGAAGGTTCCATTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAAGAGACACGTCTATCTGGCCTGAGTTGGGCCCTGTGGCCCCAGGCTTGTGGCACCTACAGATGCCGTGTTTATTCTTAAACCTCTGCCTTCCATGCAGTGGAGCTGTCATCGTCCCAGGACACCATGGCCCCAGGTGAGGGAGCAGAACACCAACCCCTGTATGCTGTGAGTTCCTGGAGTCCCCAGACTGGATTCTGAGGCTCATATTCAAATAACACCACACGTGATAGGATTACTGAGAACAAAAGCCCACAGAGAGACACGGAGTGAAATCAGGGAAACCAAAAAGCGAAGACATGAACACACACACAGAATGAGCCACAAGAAGGGAATTGAGAGACTCACAGACATATAAAGAGATAGAAAAAGAGGGCAGAGCAGT-AAGCATATGACGGAAGGGAGCAGAGAAATGCCCTAAAATCAGAGCCCTGAAGGAGAGGCACAAAAACAGGGAAAGATAAAGATGTGGGAATGGATTGCAGAGATGCCAAAAGAGAACTAGAGAGACTGAGAGGCAGAGAA----AAGGAGATGGagaaagacagatga--------gcgatagatataaatggatgaaagataagagatagatgatagataacagagagataggtgatagataa----atgatgaatg------actgatagatgatatagatagataagt--------agat--------agatgatacataaatagacatagtgagacagaa----aga i chlSab2.chr6 C 0 I 4 e calJac3.chr22 45771722 637 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M a score=542454.000000 s hg38.chr19_GL949753v2_alt 455030 463 + 796479 taaacacatgatgatagatggatagatgcatacatacatacattgattgatagatgatagataacagagagataggtcatagatacacagatgatgatagatgatag----atacatacatagataaatgatagatcgatcaatagatagtagatagaAATATGCAGAAAGTTATGAGCAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAGTCCAAGGAG---------GGTCAGAGAGAATAAAATGGTACAAAAAAAGAAAACATAGCTAGGGATGGAGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGGGGGTGGAGGGTGAGAGAGAGAAAGAGAGCATTAAGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGAGAGCTGTGACAACGAAGAACCTCCCTGAGG s panTro4.chr19 59647432 462 + 63644993 taaacacatgatgatagatggacagatgcatacatacatacattgattgatagatgatagataacagagagataggtcatagatacacagatgatgatagatgatag----atacatacatagataaatgatagatcaatcaatagataatagatagaAATATGCAGAAAATTGTGAACAAGACAGAAAGTGAGAGACTGAGACTTAAAGAAAGA-GAAGATCAAGTCAACCAATCCAAGAAG---------GGTCAGAGAGAATAAAACAGTACAAAAAAAGAAAACATAGCTAGGGATGGAGAAGTGAGGTCAGAGACCTagagagagagagaaggtggaaggaggaaatagacatgaagagagatgggggtggagggtgagacagagaaagagagCATTAAGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56579821 452 + 60714840 TAAACACATGATgatagatggatagatgcatacatgcatacattgattgatagatggtagataacagagagataggtcatagatacacagat-------gatgatag----atacatacatagataaatgatagatcgatcaatagata----atagaAATATGCAGAAAGTTATGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCCATCCAAGGAG---------GGTCAGAGAGAATAAAATCATACAAAAAAAGAAAACATAGCTAGGGATGGAAAAGTGAGGTCAGAGACCTAGACAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGTGGGTGGAGGGTGAAAGAGAGAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55625935 452 + 59248254 cagacacgtgatgatagatagatggatagatacatacatacattgattgatagatgatagataacagagagagaggtcatagatgcacagatgacgatagatgatag----atacatacatagataattgatagatcgatcaatagataatagatagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAGGGTCAGAAAGGTCAGAAATAATAAAATGGTAC-AAAAGAGAAAACATAGATAGGGATGGGGAAGTGAAGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg--------agagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGTTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697285 456 + 51301725 cagacacgtgatgatagatagatggatagatacatacatacattgattgatagatgatagataacagagagagaggtcatagatacacagatgatgatagatgatagatacatacatacatagataattgatagatcgatcaatagataatagatagaaataTGCAGAAAGTTATGaataagacagaaaatgagagactcagaattaaagaaagaggaagatcAAGTCAACCAATCCAAGTAGGGTCAGAAAggtcagaaataataaaatggtac-aaaaaagaaaacatagatagGGATGGGGAAGTGAGGTC----------agagacagagaaggtggaaggaggagacagacatgaagagagacg-gggtggagggtg--------agagagagcattaggCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378019 463 + 50890351 tagacacgtgatgatagatagatggatagatacatacatacattgattgatagatgatagataacagagagagaggtcatagatacacagatgatgatagatgatagatacatacatacatagataattgatagatcgatcaatagataatagatagaAATATGCAGAAAGTTATGAATAAGACAGAAAATGAGAGACTCAGAATTAAAGAAAGAGGAAGATCAAGTCAACCAATCCAAGTAG---------GGTCAGAAATAATAAAATGGTAC-AAAAAAGAAAACATAGCTTGCGATGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAACAGACATGAAGAGAGATG-GGGTGGAGGGTGAG--AGGCAGAGAGAGCATTAGGTCATAGAGCAGGGGAGTGAGCTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 I 4 C 0 e calJac3.chr22 45771722 637 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=317615.000000 s hg38.chr19_GL949753v2_alt 455493 223 + 796479 -AAACCACCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGCTTGTTTGACATTTACCATCTATCCAGGGAGGCAGAGGCCGGTGAACTTAGGCTCACTGCGGTGCTGAGGGTCAATGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGA------ s panTro4.chr19 59647894 223 + 63644993 -AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCGCGGAGCTTGTTTGACATTTACCATCTATCCAGGGAGGCGGAGGCCCGTGAACTTAGGCTCACTGCAGTGCTGAGGGTCAATGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGA------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580273 223 + 60714840 -AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCTGGCCCCACAGTCCAGGCAGGAGAGAGTGTGACCTTGTCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATCTATCCAGGGAGGAGGGGGGCCATGAACTTAGGCTCCCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCAGACTTTCTTCTGGGCCCTGCCA------ i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55626387 223 + 59248254 -AAACTGCCTCTTCTCTTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCGTCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697741 223 + 51301725 -AAACTGCCTCTTCTCCTTCCAGGTCTATATGCGAAACCTTGTCTCTCAGCCCAGCCAGGCCCCATGGTGCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATGGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCAAGGCTGACTTTCCTCTGGGCCCTGCAA------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378482 223 + 50890351 -AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTGTCTCTCAGTCCAGCCAGGCCCCATGGTTCAGGCAGGCGAGAACGTGACCTTGTCCTGCAGCTCCCAGAGCTCGTTTGACATTTACCATCTATCCAGGGATGGGGAGGCCCATAGACTTAGGCTCCCTGCAGTGCCGAGGGTCAGTGGAACATTCCAGGCCGACTTCCCTCTGGGCCCTGCGA------ i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772359 230 + 49145316 AAATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAG i calJac3.chr22 I 637 C 0 e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=242589.000000 s hg38.chr19_GL949753v2_alt 455716 141 + 796479 CCCACGGAGGGAACTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCCACGCGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAAAACACCATGCCTGTCCCATGTCTTGT---------GATCCTAGAGCCATA s panTro4.chr19 59648117 141 + 63644993 CCCACGGAGGGAGCTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCCACGTGTGGTCACACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAAAACACCATGCCTGTCCCATGTCTTGT---------GATCCTAGAGCCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580496 141 + 60714840 CCCATGGAGGGACCTACAGGTGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAAGTCGAGTGACCCACTGCTTATTTCTGTCACAGGTGAGGAAAGCCCATGCCTGTCCCATGTCTTAT---------GATCCTAGAGCCTTA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55626610 141 + 59248254 CCCACGGAGGGAACTACAGATGCTTTGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAACCCCATGCCTGTCCCACGTCTTGT---------AATCCTAGAGCCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47697964 141 + 51301725 CCCACGGAGGGAACTACAGATGCTTCGGCTCTTTCCGTGCCCTGCCCTATGTGTGGTCACACCCGAGTGACCCACTGCCCATTTCtgtcacaggtgaggaaaccccATGCCTGTCCCACGTCTTGT---------AATCCTAGAGCCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378705 141 + 50890351 CCAACGGAGGGAACTACAGATGCTTCGGTTCTTTCCGTACCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAAGTCCATGCCTGTTCCACGTCTTGT---------AATCCTAGAGCCATA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772589 148 + 49145316 CCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCCATA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102957397 137 + 122678785 CCCATGGGGGCACCTACAGATGCTACATTTCTCAACAGTCGTACCCGTATTCATGGTCACACCCCAGTGACCCCCTGCACCTTCAGGTCACAGGTGAGGCAGTCCCTG--CTGCACCCCATCTTTC-----------TCCTGGGCCCATA i canFam3.chr1 N 0 T 36361 e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=156677.000000 s hg38.chr19_GL949753v2_alt 455857 123 + 796479 GCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCCGAGACA-GAACACACAGCATGGGTGTAAGGGCGGGGTCAGGGGGCAGGATGGCAGACAGGGCACCTCCAAACCCTCC s panTro4.chr19 59648258 123 + 63644993 GCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGCCGAGAGA-GAACATAGAGCATGGGTGCAAGGGTGGGGTCAGGGTGCAGGATGGCAGATAGGGCACCTCCAAACCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580637 121 + 60714840 GCTGAGGAACTTCCTGCTGA------------------------TGATGGAAAGAAGGATGAACAGATGC--AGAGA-GAAGACGAAGCCTGGGTGTGAGGCCGGGGTCAGGGCACAGGATGGCAGACACGGCACCTCCAAACCCTCC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55626751 121 + 59248254 GCTGAGGAACTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGC--AGAGA-GAAGACAAAGCCTGGGTGTGAGGGTGGGTTCAGGGCGCAGGATGGCAGACAGGGCACCTCCAAACCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698105 121 + 51301725 GCTGAGGAACTTCCTTTTGA------------------------TGATGGAGAGAAGCGTGGACAGATGC--AGAGA-GAAGACAAAGCCTGGGTGTGAGGGTGGGGTCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378846 121 + 50890351 GCTGAGGAACTTCCTTTTGA------------------------TGATGGAGAGAAGCGTGAACAGATGC--AGAGA-GAAGACAAAGCCTGGGTGTGAGGGTGGGGTCATGGCACAGGATGGCAGACAGGGCACCTCCAAATCCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772737 145 + 49145316 CCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATAC--AGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC i calJac3.chr22 C 0 I 8 e canFam3.chr1 102957534 36361 + 122678785 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=47742.000000 s hg38.chr19_GL949753v2_alt 455980 47 + 796479 TGTATGGCCTGCAAGGAGGCCCTTGATCAGGGTTCCAGGCACCCAGG s panTro4.chr19 59648381 47 + 63644993 TGTATGGCCTGCAAGGAGGCCCTTGATCAGGGCTCCAGGCACCCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580758 47 + 60714840 TGCACGGCCTGCATGGAGGCCCGCGGCCAGGGCTCCAGGCACCCAGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55626872 47 + 59248254 TTCACAGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698226 47 + 51301725 TTCACAGCCCACATGGAGGCCCGCGTTCAGGGCTGTCAGCACCCAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47378967 47 + 50890351 TTCACGGCCCACATGGAGGCCCGCGTTCAGGGCTGTCGGCACCCAGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45772882 8 + 49145316 I e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=209857.000000 s hg38.chr19_GL949753v2_alt 456027 138 + 796479 CAGATGGAGAAAGAGGTCAGAACAGACCCAGA-GGAGGG-AGACTGGGCTCTGCCTGGGGAGATCAGAGGTTCTCTCAGCCCCTCAACCTTACCCA-CTTCCCAGAAGCCCATCCTGGCCTGTCACCCACAGAGAGATGTC s panTro4.chr19 59648428 138 + 63644993 CAGATGGAGAAAGAGGTCAGAACAGACCCAGA-GGAGGG-AGACTGGGCTCTGCCTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-CTTCCCAGAAGCCCATCCTGGCCTGTCACCCACAGAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580805 138 + 60714840 CAGATGGAGAAAGCGGTCAGAATAGACCCAGA-GGAGGG-AGACTGGGCTCAGTTTGGGGAGATCAGAGGTTTCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55626919 139 + 59248254 CAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGTGGGGAGACTGGGCTCAGTTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACCTTACTTA-TTTCCCAGAAGCCCATCCCGGCCTCTCACCCACAGAGAGATGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698273 139 + 51301725 CAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGTGGGGAGACTGGGCTCAGTTTGGGGAGATCTGAGGTTCCCTCAGCCCCTCAACCTTACTCA-TTTCCCAGAAGCCCATCCCGGCCTCTCACCCACAGAGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379014 139 + 50890351 CAGATGGAGAAAGCTGTCAGGACAGACCCAGA-GGAGGGCAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACTCA-TTTCCCAGAAGCCCATCCCGGCCTCTCACCCACAGAGAGATGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772890 140 + 49145316 TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 I 8 T 3003 e canFam3.chr1 102957534 36361 + 122678785 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=116432.000000 s hg38.chr19_GL949753v2_alt 456165 94 + 796479 ATCACCAGCAACGCCTACACCCTTTTCTTTTTGTTTGAAGAAATAtttattgaggtgaaatatacctatgtaatttaccacctttaccattttt s panTro4.chr19 59648566 94 + 63644993 ATCACCAGCAACCCCTATACCCTTTTCTTTTTGTTTGAAGAAATAtttattgaggtgaaatatacctataaagtttgccaccttcaccattttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56580943 94 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTTGTTTGAAAAAATAtttattgaggtgaaatatacccatatagcttaccacctttaacattttt i ponAbe2.chr19 C 0 I 13533 s macFas5.chr19 55627058 94 + 59248254 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttaccacctttaccattttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698412 94 + 51301725 ATCACCAGCAATCCCTAcacccttttcttttcatttggaaaagtatttattgaggTGGAATATACCTATATAATTTACCtcctttaccattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379153 94 + 50890351 ATCACCAGCAACCCCTACACCCTTTTCTTTTCATTTGGAAAAGTAtttattgaggtgaaatatacctatataatttaccacctttaccattttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=842698.000000 s hg38.chr19_GL949753v2_alt 456259 732 + 796479 aagtgtgaagtctactgttcataaatacatttataggctgggcacggtggctcactgttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcaggggctcaagaccaccctggccaacatggggaaaatccatctgtactaaaaatacaaaataataat---------aataatgataataattagccgagcatggtggcacatgcctgtagtcccagctacttgggagggttgggcaggagttgcacttaattgcaggaggcggaggttgcagtgagctgagatcatgccactgcactgcagcctgggcaacagagagagacactctctcaaaaTTAATTAATTAATTAATTAG-----------TATTCTTTTT-------TTTTTAccctccacccttcccttcctggcctctggtagccaccattctactctctacctttgtgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttgtaatgacctccagttccattcatgtggctgtaaatgacaggatgttactctttctatggatgagttgtccctattgtgtgtgtgtaccacattctctccatccattcacccactgatgggcaggtaggttga-tccacatcttggctactgtgaacactgctggaacagtcatgggagtgcagatgtcacttcgatacgctgatgtcctttcctttgggtttacacccagtcatggaattgctagatcct s panTro4.chr19 59648660 732 + 63644993 aagtgtgaagtctactgttcataaatacatttataggctgggcacggtggctcacggttgtaatcgcaacactttgagaggccaaggcaggtggatcatttgagatcaggggctcaagaccaccctggccaacatagggaaaatccatctgtactaaaaatacaaaataataat---------aataatgataataattagccgagcatggtggcacatgcctgtagtcccagctacttgggagggttaggcaggagatgcacttaattgcaggaggcggaggttgcagtgagctgagatcatgccactgcactgcagcctgggcaacagagagagacactctctcaaaattaattaattaattaattag-----------tattc-tttt-------tttttaccctccacccttcccttcctggcctctggtagccaccattctactctctaccttcgtgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttctaatgacctccagttccattcatgtggctgtaaatgacaggatgttactctttctatggatgagttgtccctattgtgtgtgtgtaccacattctctccatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatgggagtgcagatatcacttcgatacactgatgttctttcctttgggtttacacccagtcatggaattgctagattct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56594570 718 + 60714840 aaaagtaaaatctagtggtcataaatacctttataTgctgggtgcagtggctcatggttttaatcttggcgctttgagaggccaaggaaggcggatcatttaagatcaggggctcaagatcagcctggccaacatgtgggaaattcatctttactaaacagacaag--------------------------aaaaattggccaggcatgctggcctgcacctgtagtcctagctacatgggaggttgaggcaggagaagcacttaagcccaggagacagaggttgcactgagccgagatcatgccactgcactgcagcctgggagacagagagagactctgtctctaaataaataaaTACATCTA---------------TATTC-TTTTGTTATTGTTGTTACGctccgcccttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatacaggtgagaaatgggaatctttgcaatgacctccagttccatccatatggctgcaaatgacaggaggttgttgtttctatggatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgacgggcaggtaagttgactccacatcttggctactgtgaacagtgccgcaacaatcacacaagtgcagatatcacttcgatatattgatttacttccctttgggtttacacccagtagtggaattgctagatcct i ponAbe2.chr19 I 13533 I 79253 s macFas5.chr19 55627152 732 + 59248254 aagtgtgaagtctactgttcataaatacatttataggccgggcacggtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaa------------------aataataataataattagccgagcatggtggcacatgcctgtagtcccaactacttgggagggttaggcaggagatgcacttagttgcaggaggcacaggttgcagtgagccgagatcatgccactgcactgcagcctgggagacagacagagacactctctcaaaaTTAATTAATTAATTAATtag--tacttttttttttt-tttt-------tttttaccctccacccttcccttcctggcctctggtagccaccattctactctctactttcatgagatccaccttttagctcctgcatatgagtaagaaatggaaatacttgtaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattgtttctatggatgagtagtctccagtgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgactccacatcttggctactgtgaactgtgctagaacagtcataggagtgcagctatcacttcgatacactgaagtcctttccttttggtttacacccagtcgtggaattgctagatcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47698506 733 + 51301725 aagtgtgaagTCTACTGttcataaatacatttataggctgggcacagtggctcacggttgtaatcccaacactttgagaggccaaggcaggtggatcatttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaa------------------aataataataataattagccgagcatggtggcacatgcctgtagtcccagctacttggaagggttAGGCAGGAGATGCACTTAGTtgcaggaggcacaggttgcagtgagccaagatcatgccactgcactgcagcctgggagacagagagagacactctctcaaaattaattaattaattaattaggttttttttgttgttt-tttt-------tttttaccctccacccttcccttcctgggctctggtagccaccattctactctctactttcaTGAGATCCACCTTTTAGCTCCTGCATATGagtaagaaatggaaataattgtaatgacctccagttccatccatgtggctgcaaatgTCAGGATGTT-TTGTTTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGACTCCacatcttggctactgtgaactgTGCTAGAACAGTCATGGGAGTGCAGCTATCACTTCGATACACTGAAGTCCTTTCCTTTTGGTTTACACCCAGTCGTAGAATTGCTAGATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379247 732 + 50890351 aagtgtgaagtctactgttcataaatacatttataggccgggcactgtgactcacggttgtaatcccaacactttgagaggctaaggcaggtggatcttttgagatcagggactcaagaccaccctggccaacgtggggaaaatccatctgtactaaaaatacaaaataataataataataataataataataataattagccgagcgtggtggcacatgcctgtagtctcagctacttggaagggttaggcaggagatgcacttagttgcaggaggcagaggttgcagtgagccaagatcatgccactgcactagagcctgggagacagagagagacactctctcaaaaTTAATTAATTAGT--------------------ATT-CTTT-------TTTTTAccctccacgcttcccttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgcatatgagtgagaaatggaaatacttgtaatgacctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatggatgagtagtctccactgtgtgtatgtactacattctctctatccagtcatccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctagaacaatcatgggagtgcagatgtcacttcaatacactgaagtcctttccttttggtttacacccagtcgtggaattgctagatcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=456257.000000 s hg38.chr19_GL949753v2_alt 456991 416 + 796479 ctggaagtg-tctttttacattttgttttatggtttttgtttttgtttttgtttttTTTAGACa----gtttcactcttgttgcccaggctggagtgcagtggtgccatctgggctcactgcaacctccacctccaggattcaagagattccccagcctcagc-----------------------ctcccaagtagctggg-ttactggctcccaccaccacactcggctaatttttatatttttagtagagacagagtttcgctatattggccaggctgctcttcaactcctgacctcaagtgacctacccacctcggcctcccaatgtgctgggattacaggcatgaaccactgtgcccgacctcattttattttttgaggaacttccatactcttctcctctgtaatggctgtactaatttgcattcgtatcagcagtgta s panTro4.chr19 59649392 436 + 63644993 ctggaagtg-tctttttatgttttgttttatggtttttgtttttgtttttgttttttttagaca----gtttcactcttgttgcccaggctggagtgcagtggcgccatctgggctcactgcaacctccacctccaggattcaagagattccccagcctcagcctcccaagtagctgggttactggctcccaagtagctggg-ttactggctcccaccaccacactcggctaatttttatatttttagtagagacagagtttcgctatattggccaggctgctcttcaactcctgacctcaagtgacctacccacctcggcctcccaatgtgctgggattacaggcatgaaccactgtgcccgacctcattttatcttttgaggaacttccatactcttctcc---gtaatggctgtactaatttacattcgtatcaacagtgca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56674541 408 + 60714840 ctggacgttctctttttaggttttgttttatgctttttgttttttt--------------gacatggcgtttcactcttgttgcccaagctggagtgcaatggcaccatctgagctcactgcaacctctacctccaggattcaagcgatcctccagcctcagc-----------------------ctcctgaggagttgggattactggcgcccgccaccacgcctggctgatttttgtatttttagtagagacggggtttcaccgtgttagccaggctggtctcgaactcccaacctccagtgatctgcccacttcagcctcccaaggtgctgggattacaagcgtgagccacagtgcctaacctctttttagtttttgaggaacttccatattcttttcctctgtaatggctgtattaatttacattcctatcaacagtgta i ponAbe2.chr19 I 79253 I 1458 s macFas5.chr19 55627884 403 + 59248254 gtgcaagttgactttttacgttttgttttatggtttttgttttttttt-----------agaca--gagtttcattcttgttgcccaggctggagtgccgtggcgccatctgggctcactgcaacttgcacctccgggattcaagagattccccagcctcagc-----------------------ctcctgagtagctgagattactggctcccaccaccacactcagctaa------tatttttagtagagatggggtttctctatattggccaggctgctcttcaagtcctgacctcaagtgatctacccacctcggcctcctaatgtgctgggattacaggcatgaaccaccgtgcccaacctcattttattttttgaggaacttccatactcttctcctctgtaatggctgtactaatttacattcatatcaacagtgta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47699239 403 + 51301725 GTGCAAGTTGACtttttacgttttgttttatggtttttgttttttttt-----------agaca--gagtttcattcttgttgcccaggctggagtgccgtggtgccatctgggctcactgcaacttgcacCTCCGGGATTCAAGAGATTccctagcctcagc-----------------------ctcccaagtagctgagattactggctcccaccaccacactcagctaa------tatttttagtagagacggggtttctctatattggccaggctgctcttcaactcttgacctcaagtgatctacccacctcggcctcccaatgtgctgggattacaggcatgaaccaccgtgcccaacctcgttttattttttgaggaacttccatactctTCTCCTCtgtaatggctgtattaatttacattcataTCAACAGTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47379979 404 + 50890351 gggtaagttgactttttacgttttgttttatggtttttgttttttttt----------aagaca--gagtttcattcttgttgcccagcctggagtgccgtggcaccatctgggctcactgcaacttgcacctctaggattcaagagatttcccagcctcagc-----------------------ctcccgagtagctgagatttctggctcccaccaccacacttggctaa------tatttttagtagagacggggtttctctatattggccaggctgctcttcaagtcctgacctcaagtgatctacccacctcggcctcccaatgtgctgggattacaggcatgaaccaccgtgcccaacctcattttattttttgaggaacttccatactcttctcctctgtaatggttgtactaatttacatttatatcaacagtgta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=5874.000000 s hg38.chr19_GL949753v2_alt 457407 7 + 796479 CCAGATG s panTro4.chr19 59649828 7 + 63644993 ccagATG i panTro4.chr19 C 0 C 0 s macFas5.chr19 55628287 7 + 59248254 CCATATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47699642 7 + 51301725 CCAGATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47380383 7 + 50890351 CCAGATG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e ponAbe2.chr19 56674949 1458 + 60714840 I e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=76537.000000 s hg38.chr19_GL949753v2_alt 457414 68 + 796479 CAACCCTGGTTGACTCAG----CAGAGCAAGAGACGTGCAGTAAGAGAGAATTTAGCTTATTTATGCACACG s panTro4.chr19 59649835 72 + 63644993 CAACCCTGGTTGACTCAGCAGACAGAGCAAGAGACGTGCAGTAAGAGAGAATTTAGCTTATTTATGCACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56676407 68 + 60714840 CAACCCTGGTTGACTTAG----CAGAGCAAGAGCTTTGCAGTAAGAGAGAACGTAGTTCATCCACACACATG i ponAbe2.chr19 I 1458 T 92158 s macFas5.chr19 55628294 68 + 59248254 AAACCCTGGTTGACTCAG----CAGAGCAAGAGACTTGCAGTCAGAGAGTATTTAGTTCATTTATGCACATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47699649 68 + 51301725 AAACCCTGGTTGACTCAG----CAGAGCAAGAGACTTGCAGTCAGAgagaatttagttcatttatGCACACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47380390 68 + 50890351 AAACCCTGGTTGACACAG----CAGAGCAAGAGACTTGCAGTCAGAGAGAATTTAGTTCATTTATGCACACG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=25725.000000 s hg38.chr19_GL949753v2_alt 457482 20 + 796479 ACACTTCCACTCACTCACTC s panTro4.chr19 59649907 20 + 63644993 ACACTTCCACTCACTCACTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584317 20 + 60714840 ACACTTCGACTCACTGACTC i ponAbe2.chr19 T 92158 C 0 s macFas5.chr19 55628362 20 + 59248254 ACACTTCCACTCACTCACTC i macFas5.chr19 C 0 I 1616 s papAnu2.chr19 47699717 20 + 51301725 ACACTTCCACTCACTCACTC i papAnu2.chr19 C 0 I 1627 s chlSab2.chr6 47380458 20 + 50890351 ACACTTCCACTCACTGACTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=90967.000000 s hg38.chr19_GL949753v2_alt 457502 69 + 796479 GTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAATCTtttcctattgttgccataacaaattt s panTro4.chr19 59649927 69 + 63644993 GTTCAGCCAATGCCCCATGCTCAGGCTGTGCAGTGTGGAAtattttcctattgttgccataacaaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584337 69 + 60714840 ATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaattt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55629998 69 + 59248254 GTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAAtattttcctattgttgccataacaaattt i macFas5.chr19 I 1616 C 0 s papAnu2.chr19 47701364 69 + 51301725 GTTCAGCCAATGCCCCATGCTCTGGCTGTGCAGTGTGGAATCTTTTCCTATTGTTGCCATAACAAATTT i papAnu2.chr19 I 1627 C 0 s chlSab2.chr6 47380478 69 + 50890351 GTTCAGCCAATACCCCATGCTCTGGCTGTGCAGTGTGGAATCTtttcctattgttgccataacaaattt i chlSab2.chr6 C 0 I 1622 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=791475.000000 s hg38.chr19_GL949753v2_alt 457571 676 + 796479 ccacaagcttcgtggatgaaaacatgtt--tttcttaattatctcacagtgctgtaactcagaagtatgaactgcatttcactgggctgatatcaaagggacagtaaggctggatttctttttaaggttccaagcaagaatctgctcct-taacgtttcccagctcctagaggctcccacgttcctgggcccctggtccccttcctccttcctccttcctcaaagcccacaaaggctggtcacgtctcacatggcatcattcagactcttcttctttacccatacctttttctctgaatcctgctctgccttcttcctcatcttttaaggactttgggattctattggggtcaccaagat---aatccatctcaatctccctaaaatcatccagcgtaccctctttttaagttcagctgattagcaaccgtaatgccatctgcaatcttcattcctcctttcc-tgtaaaataacatattcacaagctatggaggctaagacagggacattttgggggtggggcagcattctcctgccttccacaAATGGTAAACAGGATGCATTTGGCCTCTGCTCTTGGGACGCTGATATTGCAGATGGGTAAATGCGAGGGCAGAGAATGAATGCACAAGGGTACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG s panTro4.chr19 59649996 669 + 63644993 ccacaagcttcgtggatgaaaacatgtt--tttcttaattatctcatggtgctgtaactcagaagtatgaaatgcatctcactgggctgatatcaaagggacagtaaggctgaatttctttttaaggttccaagcaagaatctgcttggatcacgtttcccagctcctagaggctctcacgttccttggcccctggtcc-------ccttcctccttcctcaaagcccacaaaggctggtcacatctcacatggcatcattcagactcttcttctttacccacacctttttctctgaatcctgctctgccttcttcctcatcttttaaggactttgggattctattggggtcaccaagat---aatccatctcaatctccctaaaatcatccagcataccctctttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttcc-tgtaaaataacatattcacaagctatggaggctaagacagggacgtttt-ggggtggggcagcattctcttgccttccacaAATGGTAAACAGGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGAGTAAATGCGAGGGCAGAAAATGAATGCACAAGGTTACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56584406 671 + 60714840 ccacaaaattcgtgggtgaaaacaaaacggttttttaattatcttacagtgctatagctca-aagtatgaagtgcatctcactgggttaaaatcaaggtgacagcaaggctgccttccctctgaagtttccaggcaagaatctgcttc--tcacttgtcccagcttctaaaggctcccatgttccttggctcccggtcc-------ccttcctcctttctcaaaatccacaaagactggtcacatctcgcatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacacttcttcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccagaaatcatccaggataccctggttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccacataaaataacatattcacaagctatggaggctaggacagggacatttt-ggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTA i ponAbe2.chr19 C 0 I 30 s macFas5.chr19 55630067 663 + 59248254 ccacaagctttgtggatgaaagcatgtt--tttcttaattatctcacagtgctatagctcagaagtacgaaatgcatctcactgggctgatatcaaaggcacagcaaggctgaacttctttttaaggttccaagcaagaatctgctcc--ttacatttcccagttcctagaggctcccacgttctttggcccctagacc-------ccttcctccttcctcaaagcccatgaaggctggtcacgtctcacatggcatcattcagac---tcttcttcacccacacctctttctctgaatgctactctgcctttttcctcatc-tttaaggactttgggattctattggggtcaccaagat---aatccatcataatctccctaaaatcgtctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgtaatcttcattcctcctttca-tgtaaaataatatattcacaagctatggaggctaggacagggacatttt-ggggtggggcagcattcgcctgccttccacaAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47701433 666 + 51301725 CCACAAGCTTTGTGGATGAAAGCATGTT--TTTCTTAATTATCTCACAGTGCTGTAACTCAGAAGTATGAAATGCATCTCACTGGGCTGATATCAAAGGCACAGGAAGGCTGAACTTCTTTTTAAGATTCCAAGCAAGAATCTGCTCC--TTACATTTCCCAGTTCCTAAAGACTCCCATGTTCTTTGGCTCCTagtcc-------ccttcctccttcctcaaaGCCCATAAAGGCTGGTCACGTCTCACATGGCATCATTCAAACTGTTATTCTTCACCCACACCTCTTTCTCTGAATGCTACTCTgcctttttcctcatc-tttaaggACTTTGGGATTCTACTGGGGTCACCAAGAT---AATCCATCATAATCTCCCTAAAATCGTCTAGGATACCCTCCTTTTCAgttcagctgattagcaaccatAATTCCATCTGCAATCTTCATTCCTCCtttca-tgtaaaataatatattcacaaGCTATGGAGGCTAGGACAGTGACATTTT-GGGGTGGGgcagcattctcctgccttccaCAAATGGTAAACAGGGTGCATTCGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACCAaatctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47382169 666 + 50890351 ccacaagctttgtggatgaaagcatgtt--tttcttaattatctcacagtgctgtagctcagaagtatgaaatgcatctcactgggctgatatcaaagggacaacaaggctgagcttctttttaaggttccaagtaagaatctgctcc--ttacatttcccaactcctagaggctcccacgttctttggcccctggtcc-------ccttcctccttcctcaaagcccacaaaggctggtcacgtctcacatggcatcattcagactcttcttcttcacccacacctctttctctgaatgctactctgccttcttcctcatc-tttagggactttgggattctattggggtcatcaagat---aatccatcataatctccctaaaatcatctaggataccctccttttcagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttca-tgtaaaatgacatagtcacaagccatggaggctaggacagggacatttt-ggggtggggcagcattctcctgccttccacaAATGGTAAACAGGGTGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAAAACGAGGGCAGAAAATGAATGCACAAGTGGATCCACAAATGAATGATCCATTGGGAAGCATCTGTGCACCAAATCTG i chlSab2.chr6 I 1622 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=10894.000000 s hg38.chr19_GL949753v2_alt 458247 49 + 796479 GGGTTTTTTGTGTGTGTGTG---TGttttttgttttcttttttttttttga-g s panTro4.chr19 59650665 53 + 63644993 GGTTTTTTGTTTTTTGTGGGtttttttttttttttttttttttttttttgagg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55630730 28 + 59248254 -------------------------tttttttggcttttgttttgttttgagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47702099 28 + 51301725 -------------------------tttttttggtttttgttttgttttgagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47382835 28 + 50890351 -------------------------tttttttggtttgtgttttgttttgagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e ponAbe2.chr19 56585077 30 + 60714840 I e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=4398823.000000 s hg38.chr19_GL949753v2_alt 458296 3685 + 796479 tagagtctctctctgttccacaggctggagtgcagtagcacaatctcagctcattgcaacctctgcctcctgggttcatgcaattctcctgcctcagcctaccgagtagctgggattacagctgtgcgccaccacactcggctaa-tttttttggtatattttttagtagaaatgaggtttcaccatgttgtgcaggc-tgtctcaaactcccaatctcaagtgatcccaccgccttagcgtccctaagtgcaaagattacaggcgagagctactgcgcccagccAGGATTTAAAATAAGTAATAGATAATGCTgagtatataatttcaggtgacagagaaggtctcactgatcagataatatttgtgaccttaatggaaaaaatggattcaacccttggaagattggcggaaggattttccacactgagctctcagccgtgaaggcacaaaggtggaaacattct---ta-gttcaaggaagaggctctgc-ctcaaatgctgggaatgagatggggagaatgacaagacaactgtagagagatggagagcACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGCATGTTTTTGATACTCACAGCCCTTGGATTCAACTCAGAGCTAACTAGGAATCCCTACCTGATTAACAGTGACCGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAACGTAGGGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGCTATGCTTGTGAGGTAGAATCATTTGCAGGGAGGGCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTG--TTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCGATAGACACATGAGGGGTGGTGCAAATGAAGGGACCTAGT---ATAATATAATATACAAGACTGTGGATgggggctcacacctgtaacccaacactttgggaggccaaggcgggtagatcacttaagggtaggagtttgagaccagcctggccaacatggtgaaaccccgtctgtactaaaaatacaaaaattagcctggtgcattggcacctgcctgtaatcccag---cgactggggaggctgaagcagaagaatggcttcaaccctggaggcagaggt-----tgaactgagatcgcatcactgcactccagcct----gacacagggggactctgtctcaaaaaat-aaaaataaaaCATACATAAT-----TATGACACACAGAAATTACAAAGGCAACTGGATACCAACCATCATTTTTCTATTTCTCTGTG-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGTT-AAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGGGATCATATGGAAAATGTGAAAGCCTCCTGAACCCACCAGCACAGGTCCTGGAATAGAGAACGTGCTCTGTTCATGGC--ATAAAACTTGCCCCTTCACCCAAATCCCCCAATTCATCTCTACTTCCAATCACCTATGGAGATACAGATAGATCATGGGGAGGTAAACACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCCAGCACTAGCCCCTGGTCACATTTCGTACTAACTCACAGAAGGACAGGCTGTATTGAAACAATAAACGACGGAGAGGGCGGTCCTTCCCCGTGCTTCTCGGGTGGAATAGCAGCCTAATATATGTCTCAGCAGATCACAAAAAGTAGCATGTTGTTCCTGGGCTACATCATTatttcatggctgtttgatttaagtcagttctacttcacttttttt-atcttgatttcattttttctttcttttcTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGTGGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAATCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGAATGTACCTGGGCCTATACCAATTCCTATCACTCACCGTCACtccagggagacagaacacacagagaacacattacacaggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgagacatgtggagtcaccccatatgcagtgtatctgggggaaatcaaaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgggatgttcctcctgatctcaggactttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttctaaagaaaagaaatgtgtttgcctcacagttctgcaggctgtactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccgctctggcagaagggaaggagggtctatctgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagcgatggagcttccaagttctttttaacaaccagctctccaggaactaatagagggggaacttgctaaccccatctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccaccctgggggttacatttcaatgtgaggtttgaagtggtcaaacatctaaactaaagcagttgtatcctcagcacgttctatggtta---------ctacaactgagaaagcaggaggaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAGAAATGTGAGACAATTCATATAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTTGTCTTCCTCCAGGTAACTCCAGATACCTGCACGCTCTGATTGGGACCTCAGTGGTCATCATCCCCTTtgctatcctcctcttctttctccttcatcgctggtgtgccaacaaaaagagtaagtctcacgaagcagaaGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTTACAGGCAGGATGGTCCCTGACCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACTCCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACCATATCCTCACATCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGCATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGACGACTTCCGTCTTCTACAGATGCTGTTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCAGCCCAGCCTCATGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATT s panTro4.chr19 59650718 3691 + 63644993 tagagtcttgctctgtcccacaggctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcatgcgattctcctgcctcagcctactgagtagctgggattacagccacacgccaccacacttggctca--ttttttggtatattttttagtggagatgaggtttcaccatgttgtgcaggc-tgtctcaaactcccaatctcaagtgatctcaccaccttagcctccctaagtgcaaggattacaggtgagagccactgcacccagccAGGATTTAAAATAAATAATAGATAATGGTgagtatataatttcaggtggcagagaagatctcactgatcagataatatttgtgaccttaatgaaaaaaacggattcaacccttggaatattgatggaaggattttccacactgagctctcagccttgaaggcataaaggtggaaacattct---tacattcaaggaagtggctctgc-ctcaaatgctgggaatgagatggggagaatgacaagacaactgtagagagatggagagcACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGACATTGGATTCAACTCAGGGCTAACAAGGAATCCCTACCTGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAACCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAACGTAGGGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGCTATGCTTGTGAGATACAATCATTTGCAGGGAGGGCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTGTTTTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCGATAGACACATGAGAGGTGGTGCAAATGAAGGGACCTAGT---ATAATATAATATACAAGACTGTGGATgggggctcacacctgtaacccaacactttgggaggccaaggcgggtagatcacttaagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtctgtgctaaaaatacaaaaattagcccgatgcattggtgcctgcctgtaatcccag---cgactggggaggctgaagcaggagaatggcttcaaccctggaggcagaggt-----tgagctgagatcccatcactgtactccagcct----gacacagggggactctgtctcaaaaaat-aaaaataaaaCATACATAATTATAATATGACACACAGAAATTACAAAGGCAACTGAATACCATCCATCGTTTTTCTATTTCTCTGTA-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGAAAGCCTCCTGCACCCACCAGCACAGGTCCTGGAATAGAACACGTGCTCTGTTCATGGC--ATAAAACTTGCCCCTTCACCCAAATCCCCCAATTCATCTCTACTTCCAATCACCTATGGAGATACAGATAGATCTTGGGGAGGTAAACACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCCAGCACTAGCCCCTGGTCACATTTCGTACTAACTCACAGAAGGACAGGCTGTATTGAAACAATAAACGACGGAGAGGGCGGTCCTTCCCCGTGCTTCCCGGGTGGAATAGCAGCCTAATATATGTCTCAGGAGATCACAAAAAGTAGCATGTTGTTCCTGGGCTACATCATTATTTCATGGCTGTTTGATTTAAGTCAGTTCTACTTCACTTTTTTT-ATCTTGATTTCATTTTTTCTTTCTTTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGAGGTAGAAACTGTAAAGCACATTCACCGTGTTTCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactctagggagacagaacacacagagaatacgttacacaggcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgagacatgtggagtcaccccatatgcagtgtatctgggggaactcaaaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggacgttgctgtcttagtccatttttgttgctataaaagaacacttgagcc-gggtaacttctaaag-aaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagagagcaagggggagggggagcgatggagcttccaagctcttttgaacaaccagctctccaggaactaatagagggggaacttgctaaccccatctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccaccctgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttctatggtta---------ctataactgagaaagcaggagaaagctgggtctcccgccatctgggtgcttgtcctAAAGAGGTGTTTTATGTGGTTACCTGTCAATCAAGAAATGCGAGGCAATTCATAAAGAGGAACTGCTATGATCAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGCCATCAtcctcctcatcctcctcctcttctttctcctTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCATGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACCGGCAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGCTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCTGAGCTGTTTTGATGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACTAAGAGCCTGCAGGGAAAAGAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56585107 3706 + 60714840 cagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgcgtctcctcgattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgtcatcatgcccggctaa-ttctttttgtat-tttttttgtagagaggatgtttccccatgttggccgagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacagacgtgagccactgtgcccagccAGAATTTAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAAGTCTCACTAATCAG---ATATTTGTGACATTAATCAAAAACATGGATTGAACACCTGAAAGATTGGCAGAAGGATTTTCCACACACAGCTGTCAGCTGTGAAGGCACAAAAGTGAAAACAATCT---GATGTTGAAGGAAGAGGTTCTACATTCAAATGCTGGGAATGAGATGGGGAGAATGACAAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGCAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATATTTGTGAGGTAGAATCATTTGCAGGGAGGGCTTGCAGGGTTTGA-TTTTCCTCGTTGTTTAATCCTCAGTAAATTAATTTCTTTCTGAGATTTA----TTCCTCCTACAGGTAAATCAATACCTGGCAAAGGAGTGACGGATATATGAGGGGTGGTGGAGATGAAGGGACCTATT---ATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaacacaaaaattagccgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggagctggaggttgcagtgagtcgagatcgtatcactgcattccagcctggg-gacacaaggagactctgtctcaaaaact-aaaaataagaaaTTCTTAAATATAATAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTCTA-ATCACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGATATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGTTCATGGCAAAAAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTCGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCTGAGATCATAAAGAGTAGCACGTTTCACATGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTTGCTATTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGGAAGTTGTTTGACTCAAGAATGCTGTAGATGTAGAAATCCTAAAGCACATTTGCTGTGTATGAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCTTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacataggcaggttcattactaacagataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcacccgatttgcagtgtagctgggagaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagccca-gctgttctgggacattcctcctcatctcaggacgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttggctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcttgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatca-acggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaatagagggggaacttgctaaccccctctccctggaacagcattgatctcttcatgatggatccacctccatgacccaaacacctcccaataggcccaacctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtagcctcagcacgttctatggttactatgagagctataactgagaaagtgggagaaagctaggtttcccgccatctgggtgcttgtcctAAAGAGACATTGTATGTGGTTACCTGTCAATCGAGATATGCGAGACAATTCATAAAGAGGAACTGCTATGATTACCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAGTAGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGACCAGAGAGCTCAGGGCCACGTGGGGAAGCAGGATGGGTGCACGCAGGTGTGTGTTCCTCACCGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAAGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGTCCCTTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAGTCAATGGGATGGGAACTCAGAGCTATTCATGGAATGGGTCCTTGAGCTCAGAGTGAGAGAATGTCTGTGTCT-GCTGTTGGCAACTGAGGGACCTCGGGCACCTATGGCCTCCCCCTGCATGTTGCTATCTGCTTATGAAATGAGGATCCACAAGTGCCCTCTGAGCTGTTTTGACGACTACTGTCTTCTACAGATGCTGTTGTAATGGATCAAGAGCCTGCAGGGAACAGAACAGTGAACAGAGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGG--CTAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGCACCCTCCCTCACTCAGCATT i ponAbe2.chr19 I 30 C 0 s macFas5.chr19 55630758 3715 + 59248254 tagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaaaattttttggtatattttttagtagagatgaggtttcaccgtgttgtgcaggc-tgtctcaaactcccaatctcaagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagccAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaaggtctcactgatcagataatatttatgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaggattttgcacactgagctctcagctgtgaaagcacaaaggtggaaacattcttaataagttcaaggaagaggctctgc-ctgaaacgctgggaatgagatggggagaattacaagaCCACTGGAGAGAGACAGAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTATACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGACGTGAAAATAAAGGAGGCCCCGGTGCGTAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCACCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTA--TTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGTAATGGACACATGAGGGGTGGTGCAAATGAAAGGACCTAGT---ATAACATAATATACGAGACTGG--ATgggggctcatgcctgtaacccaacacttttggatgccaaggtgggtgcatcctttgagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcctggtgcattggcacgtgcctgtaatcccag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggcaacacagggggactctgtctcaaaaaataaaaaataaaaaaTACATAAATATGATATAACATACACAAATTACAAAGGCACCTGAATGCCAACCATCATTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGTTTGAGATCATACAGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGT--ATAAAACTTGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATTCAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGCTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCACTGCCTCTCAGGTAGAACAACAGCTTAATA-ATGTCTCAGGAGATCACAAAAAGTAGCACGTTATTCCTGGGCTGCATCATTATTTCATGGCTGTTTGATTTAAGTCAGATTTACTTCACCTTTTCTGATCTTGATTTCACTTTTTATTTCTTTTCTTGGAGAATGTAATTTTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctatccctcaccgtcactccagggagacagaacacacagagaatacatgacataggcaggttcattactaacacataagcagcaactgacaacagaagcctatatttcgatgtaagccagtcccccaaggctcagaaaagctgttcgggatatatggagtcaccccatttgcactgcagctgggggaacccacaaagcagccctgcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttctaaagaaatgagatttgtttgcctcacagttctgcaggctgtactagaagcatggaaccagcatctatttcttctgatggcctcaggctgctcccactctggcagaaaggaaggagggtctgtgtgtgcagagaccacagagatcacacagcaagagagggagcaaggggaagagggagcgatggagcttccaagctctttttaacaaccagctctccaggaactaatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgacccaaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacattctatggttactatgagagctataagtgagagaggaggagaaagctgggtcTCCTGCTATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCATAGAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGGGAAGTGGGATGGGAGCACGCAGGTGTGTGTTTCTCACTGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTCAGAGCTATTCATGGGATGAGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAAGCCCCTCCCTCACTCAACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47702127 3711 + 51301725 tagagtctcactctgtcccacaggctggagtgcagtggcacaatctcaactcactgcaccctctgcctcctgggttcatgcaattcttctgcctcagcctactgagtagctgggattacagccatgcaccaccacactcagctaaaattttttggtatattttttagtagagatgaggtttcaccgtgttgtgcaggc-tgtctcaaactcccaatctcaagtaatctgactgccttggcctccctaagtgcaaggattataggcgtgagccactgtgccaagccaggatttaaaataaataatagataatgCTGAGTGTATAATTTCAGGTGACAGAGAAGGTCTCACTGATCAGATAATATTTGTGAccttaatgaaaaaaatggatTCAACCCTTGGAAGATTGGCAGAAGGATTTTCCACACTGAGCTCTCAGCTGTGAAGGCACAAAGGTGGAAACATTCT---TAAGTTCAAGGAAGAGGCTCTGC-CCGAAACGCTGGGAATGAGATGGGGAGAATTACAAGACcactggagagaga-ggagagcacACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTGTGTGTTTTACACTCTCAGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAACAGTGACTGACGTGAAAATAAGGGAGGCCCCAGTGCATAACTGGAATCTAGGAGATTGTCGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTAGAGTTGATTTACAcactaaatgaatgaa--agatgGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATccttgttttattaatttctttctgaGATGTA--CtttttttCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGGGGTGGTGCAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGtgcatgggggctcacgcctgtaacctaaCACTTTTggatgccaaggcgggtgcatcCCTTGagggtaggagtttgagaccagcctggccaacatggtgaaaccctgtgtgtgctaaaaatacaaaaattagcccggtgcattggcacatgcctgtaatcgcag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggtgccactgcactccagcctgggtgacacagggggactctgtctcaaaaaat-aaaaataaaaaatacataaatatgataTAAC--ACACAAATTACAAAGGCACCTGAATACCAACCATCGTTTTTCTACTTCTCTGTC-TTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTCCTTATTTGGCTTTCTGTGAGCTTGAGATCATATGGAAAATGTGGAAGCCCCCTGAACCCACCAACGCAGGCCCTGGAATAGAGAATGTGCTCTGTTCATGGT--ATAAAACTTGTCCTCTCACCCAAATCCCCTACCTGACTCCTACTTCCAAGCACCTGTGGAGATACAGATAGATCATGGGAAGGTAAAAACTAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGCGCCAGCACTATCTCCTGGTCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTCAGGTAGAACAACAGCTTAATATGTGTCTCAGGAGATCACAAAAAGTAGCACATTGTTCCTGGGCTGCATCATTATTTCATGGCTGtttgatttaagtggggtttacttcaccttttttgatcttgatttcactttttatttcttttcttggagaATGTAATGTGTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCGAGTCCAGTCTTCCCAGAGAAGA--CTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCCCTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACATGACATAGGCAGGTTCATTGCTAACAGATAACCAGCAAGTGACAACAGAAGCCTATATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGAGTCACCCCATTTGCACTGCAGCTGGGGGAACCCACAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCAGGCTGTTCTGGGACATTCCTCCTGATCTCAGGACGTTGCCGTCTTAGTCCCTTTTTGTGGCTATAAAAGAACACTTGAGCCTGAGTAACTTCTAAAGAAATGAGATTTGTTTgcctcatagttctgcaggctgtactaGAAGCATGGAACCAGCATCTATTTCTTCTGATGGCCTCAGGCTGCTCCCACTCTGGCAGAAAGGAAGGAGGGTCTGTGTGTGCAGAGACCACAGAGATCACActgcaagagagggagcaaggggAAGAGGGAGCGATGGAGCTTCCAAGCtctgtttaacaaccagctctccagGAACTAATAGAGGGAGAACTTGCTAACCCTGTCTCCTTGGGACAGCATTGATCTATTCACGAtggatccacctccatgacccaaacacctcccaagaGGCCCAACCTCCCACACTGGGGGTTAAATTTCAATGTGAGGTTTCAA-GGGTCAAACATCTAAACTAAAGCAGTGGTATCCTCAGCACGTTCTATGGTTCCTATGAGAGCTATAactgagagaggaggagaaagctgGGTCTCCCGCCATCTGGCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCGAGACAATCCATAAGGAGGAACCGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGTGTCCTCAGTGGTTATGATCCCCTTCAccatcctcctcttctttctcctgcatCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGGAGAGGCCAGAGACCTCAGGGCCTTGTGGGGAAGTGGGATGGGAGCACGCAGATGTGTGTTTCTCACTGGCAGGATGGTCTCGGGCCCAAGGCAGGAGCCACAGAGGCAGGGATTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCCCAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGGAACTGACAGCTCTTCATGGGATGGGTCCTTTAGCTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACAGTCTCCCGCTGTGTGTTGGGCTCTGCTCATGAAATGAGGACCCAGAAGTGTCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCATGGATATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCTCTCCCTCACTCAACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47382863 3711 + 50890351 tagagtctcactctgtcccacaggctggagtgcagtgacacaatctcaactcactgcaacctctgcctcctgggttcatgcaattcttctgcctcagcctaccgagtagctgggattacagccgcgcaccaccacactcggctaattttttttggtatattttttagtagagatgaggtttcaccgtgttgtgcagtc-tgtctcaaactcccaatctcgagtaatctgaccgccttggcctccctaagtgcaaggattataggcgtgagccactgtgcccagtcAGGATTTAAAATAAATAATAGATAATGCTgagtgtataatttcaggtgacagagaaggtctcactgatcagataatatttgtgaccttaatgaaaaaaatggattcaacccttggaagattggcagaaagattttccacactgagccctcagccgtgaaggcaaaaaggtggaaacattct---tatgttcaaggaagagGCTCTGC-CCAAAATGCTGGGAATGAGATGGCGAGAATTACAAGACCACTGGAGAGAAA-GAAGAGCACACTGGGCACACAGGAAACTAAGAAGGAACAAGGAGTATGTGTTTTATACTCGCCGCCCTTGGATTCAACTCAGGGCTAACTAGGAATCCCTAAGTGATTAATAGTGACTGATGTGAAAATAAGGGGGGCCCCGGTGCGTAACTGGAATCTAGAAGATTGTCGAAAAGGCAATTCACATCCCACTGGTGAAATGTAGAGTTGATTTACACACTAAATGAATGAA--AGATGGATATAAGATGTGTTTGTGAGGTAGAATCATTTGCAGGGAGGTCTTGCTGGGTTTGATTTTTCCTAGTAGTTTAATCCTTGTTTCATTAATTTCTTTCTGAGATGTA--CTTTTTTTCTACATCTAAATCAATACCTGGCAGAGGAGCAATGGACACACGAGAGGTGGTGTAAATGAAAGGACCTAGTATAATAACATAATATGTGAGACTGTgcatgggggctcacacctgtaacccaacacttttggatgccaaggcgggtgcatcccttgagggtaggagcttgagaccagcctggccaacatggtgaaaccccgtgtgtactaaaaatacaaaaattagcccggtgcattggcacgtgcctgtaatcacag---ttactagggaggctgaagcaggagaatggcttcaaccctggaggcagaggtttcagtgagctgagatggcgccactgcactccagcctgggcaacacagggggactc--tctcaaaaaat-aaaaataaaaaaTACGTAAGTATGATATAACACACACAAATTACAAAGGCACCTGAATACCAACCATCATTTTTCTACTTCTCTGTCTTTTAATTCTTTGACCCTTTATCTTATCCATTAAACAATCAGGCTAAAACCTCTTTCTTATTTGGCTTTCTGTGAGCTTGAGATCATACGGAAAATGTGGAAGCCCCTTGAACCCACCAACGCAGGCTCTGGAATAGAGAATGTGCTCTGTTCATGGT--ATAAAACTTGCCCTGTCACCCAAATCCCCCACCTCACTCCTACTTCCAATCACCTGTGGAGATACAGATAGATCATGGGGAGATAAAAACCAATACTCTTTGGAGTGAGCTCAGATCTTGGACTCAGAGACCAGTGCTAGCACTATCTCCTGATCACATTTCGTACTAACTCACAGAAGAACAGGGTGTATTGAAACAATAGATGATGGAGGTGGTTGTGCTTCCCCCGGACTCTTAGGTAGAACAACAGCTTAATATGTGTCTCGGGAGATCACAAAAAGTAGCACGTTGCTCCTGGGCTGCATCATTATTTCATGGTTGTTTGATTTAAGTCAGGTTTACTTCACCTTTTTTGATCTTGATTTCACTCTTTATTTCTTTTCTTGGAGAATGTAATTCTTTTGAGTCAAGAGGGTTGTGGCTGTAGAAATTGTAAAGCACATTCACTGTGCATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacctggggctatgccagtttctgtcactcaccatcatttcagggagacagaacacacagagaatacatgacataggcaggttcattactaacagataaccagcaagtgacaacagaagcctatatttctatgtgagccagtcccccaaggctcagaaaagctgcttgggacatatggagtcaccccatttgcagtgcagctgggggaacccacaaagcagcccggcctgggttttgtaccctggagccacaggaaacactgagctaaagcactgcatgacgtcctcctctaggaagaataggaagacagcccaggctgttctgggacgttcctcctgatctcaggatgttgccgtcttagtccctttttgaggctataaaagaacacttgagcctgggtaacttctaaagaaacgagatttgtttgcctcacagttctgcaggctgtactggaagcacggaaccagcatctatttcttgtgatggcctcaggctgctcccattctggcagaaaggaaggggggtctgtgtgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagcaatggagcttccaagctctttttaacaaccagctctccaggaactgatagagggagaacttgctaaccctgtctccttgggacagcattgatctattcacgatggatccacctccatgaccccaacacctcccaagaggcccaacctcccacactgggggttaaatttcaatgtgaggtttcaaggggtcaaacatctaaactaaagcagtggtatcctcagcacgttctatggttactatgagagctataactgagagaggaggagaaagctgggtctcccgccatctggCTGTTTGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATTCGAGACAATCCATAAGGAGGAACTGCTGTGATTAGCTTCTTATTGGTGTCTCGTCTTCCCCCAGGTAACCCCAGACACTCGCATGTTCTGATTGTGTCCTCAGTGGTCATCATCCCCTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAAAAAAAAGAGTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGTCCC-TGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATCGGATGAGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCC-CTGTATCTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCTTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGTCTCGTGG--ATAGTCTTATTCCCTAAGAGGCCTGAAAAATAGGAACCCCCTCCCTCACT-AACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102957534 36361 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=130346.000000 s hg38.chr19_GL949753v2_alt 461981 83 + 796479 TCCCTCCCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGAATCACTGCGTTTTCACACAGAGAA s panTro4.chr19 59654409 83 + 63644993 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56588813 83 + 60714840 TCCCTCTCTC-CAGGATTCTGATGAACAAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAAAGAA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55634473 83 + 59248254 TCCCTCTCTC-CAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACACAGAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47705838 83 + 51301725 TCCCTCTCTG-CAGGACTCTGATGAACCAGATCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTTTCACTCAGAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386574 83 + 50890351 TCCCTCTCTC-CAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921173 84 + 122678785 TCTCTCTCTCTCAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGACCACCACATCCTCACACAGAGGA i canFam3.chr1 T 36361 I 36846 e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=66038.000000 s hg38.chr19_GL949753v2_alt 462064 49 + 796479 AAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG s panTro4.chr19 59654492 49 + 63644993 AAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56588896 49 + 60714840 AAATCACTTGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55634556 49 + 59248254 AAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47705921 49 + 51301725 AAATCGCTCGCCCTTCTCAGAGGCCCAAGAGACCCCCAACAGATACCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386657 49 + 50890351 AAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103239075 8807 - 106955855 M e rheMac3.chr19 60526104 4867 + 64156825 I a score=1073958.000000 s hg38.chr19_GL949753v2_alt 462113 669 + 796479 CGTGTAACACGGAACTTCCAAATGCTGAGCGCAGATCCAAAGTTGTCTTCTGTCCACCAGCACCACAGTCAGGCCTTGATGGGATCTTCTAGGGAGACAATAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatataagaggctccctcttaacacggcacttagatacatgctattccacctttcctcatgttgttccacctttcctcAGAGTATCTTTCAGCCTTCTGTCAGCAGTAAAACTTATAAA-TTTTTTT-TATAATTTCAATGTAGTTTTCTATTCTTCAAGTAAACATGTCTGCCCTCATGGTTTCGTCAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCATTACCACGTCCACATAACCCCATCTGTTCTCCGCTGGGTtctcacccctgga s panTro4.chr19 59654541 648 + 63644993 CATGT-ACATAGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAAACAGGTTGCCAGCTCCCATGTACCAGCAGCTGAAATCTGAAGGCGTCAGTCTTCATCTTAGGGCATCGCTCTCCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTGTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatgcaagaggctccctcttaacacagcacttagacacgtgc--------------------tgttccacctcccttcagactatctttcagccttctgccagcagtaaagcttataaa-tttttta-aataatttcaatgtagttttcccgccttcaaataaacatgtctgccctcatggtttcggtaacgagactcttttcttgcctaaggcttccggtgttatcattaccatgtccacataaccccatctgttctccactgggttctcagccctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56588945 667 + 60714840 CGTGT-ACACGGAACTTCCAAATGCTGAGCCCTGATCCAAAGTTTTCTCCCGCCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGTCTTGTCTCAAAACCGGGTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGACATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAA-GTCCCCACTGCCTGCTGGAGAGAAAACACACT-GTTTGCTTAGCCCACAATTCTCTATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcgatcacactgaggaactcacaattccaaacatacaagagggtccctcttaacacggcacttacacacgtgctgttccaccttccctcatgctgttccacctttcctcAGACTATCTTTCAGCCTTCTGTTGGCAGCAAAACttataaatttttttt-aataatttCAATGTAGTTTTCCCTCCTTCAAATAAACATGGCTGCCCTCATGGTTTCGGTAATGGGAATCTTTTCTTGCCTAAGGCTTCCGGTGTTATCAGTACCATGTCCATATTACCCCATCTGTTCTCCATTGGGTTCTCACCCCTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103247882 665 - 106955855 CGTGT-ACACGGAACTTCCAAATGCTGATCCCAGATCCAAAGTTGTCTCCTGCCCACAAGCACCACAGTCAGGCCTTGAGGGGGTTTTCTAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATTGCTCTTCCTCACACCACAAATCTG---GTGTCTCTCTCTTGCTTACAAATGTCTATGGTTCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCTATTTCACTTGacccctgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaattccaaacacacaagaggctccctcttaacacggcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactatctttcagtcttctgtcatcagtAAAATTTATAAA-TTTTTTT--ATAATTTCAATGTAGCTCTCTCCTCTTCAAATAAACATGTCTGCCCTCATGGTTTCGGTAATGTGACTCTTTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCGATATGTTCTCCACTGGGTTCTCAcccctgga i nomLeu3.chr10 M 8807 C 0 s macFas5.chr19 55634605 665 + 59248254 CGTGT-ACATAGAGCTTCCAAATGCTGAGCCCAGATC----ATTGTCTCCTGCCCGTGAGCACCAGAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCActtcacttgatccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcgatcacactgaggaactcacaattccaaatatacgagaggctccctcttaacacggcacttagacatgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTAAAACTTACAAA-TTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCCAAAAGTTTCCAGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47705970 664 + 51301725 CGTGT-ACACGGAGCTTCCACATGCTGAGCCCAGATC----ATTGTCTCCTGCCCATGAGCACCACAGACAGGCCTGGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGGTTGCTGGTTCCAATGTACCAGCAGCAGGAATCTGAAGGCGCGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCCCACTGCCTGCTGGAAAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCACTTCCCTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAGTTCCAAACATACGAGAGGCTCCCTCTTAACACAGCACTT-GACAGGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaa-tttttaaaaataatttcaatggaGTTTTCTCTTCTTCAAATAAACATGTCTGCCCTCATCCTTTAGGTAATGTGACTCTCTTTTGGCTGAAAGAAACCGGTGTTATCATTACTATGTCCATATAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47386706 669 + 50890351 CGTGT-ACACGGAACTTCCAAATGCTGAATCCAGATCGAAAGTTGTCTTCTACCCATGAGCACCACCGTCAGGCCTTGCAGGGGTCTTCTATGGAGACAACAGTCCTGTCTCAAAACTGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacaagagactccctcttaacacagcacttagacatgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAGCAGTAAAACTTATAAA-TTTTTAAAAATAATTTCAATGTAGTTACCTCTTCTTCAAATAAACATGTCTATCCTCATGGTTTCAGTAATGTGACTCTTTTCTTGCTGAAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATATGTTCTCCACTGGATTCTCACCCCTAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60526104 4867 + 64156825 I a score=121976.000000 s hg38.chr19_GL949753v2_alt 462782 55 + 796479 ctctgagcttctggaagcagggtggagcctgaattgtctctgagactccagtttc s panTro4.chr19 59655189 55 + 63644993 ctctgagcttctggaagcagaatggagcctgatttgtctctgAGACTCCAATTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589612 55 + 60714840 CTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTTTCTTCTGGGACTCCAATTTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103248547 55 - 106955855 ctctgagcctctggaagcagggtggagcctgatttgtctctgggactccaatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60530971 55 + 64156825 CTCTGAGCTTCTGGAAGCAGAGTGGAGCCTGGTTTCTGTCTGGAACTCCAATTTC i rheMac3.chr19 I 4867 T 4917 s macFas5.chr19 55635270 55 + 59248254 CTCTGAGCTTCTGGAAGCAGAGTGGAACCTGGTTTCTGTCTGGAACTCCAATTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47706634 54 + 51301725 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTTTCTGGGACTCCAATTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387375 54 + 50890351 CTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T a score=646626.000000 s hg38.chr19_GL949753v2_alt 462837 421 + 796479 catccaaagatgcagcacataggaggttccaaggatggtgaatcagatgaaCAAGTGATATTCTTACTCTCTGCAGATCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACAGGG-ACACGTATCAACACATCATCTTTCATACTACTATAAATAGAcagtcactcctccatatctctggggtttacacatgtttattgaatcagcaataaatcaaaaatattttgagaaaaaaaa-tccccgaagtttcaaaaagcaaaaaactatgttgaatcgacacaaattgagt--ggcgtgtaggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttctatgcaattgctatgcta---------tt s panTro4.chr19 59655244 421 + 63644993 CATCCAAAGATACAGCACATAGGAGGCTCCAAGAATCGTGAATCACATGAACAAGGGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATATCAACATATCATCTTTCA---TAATATAAATATAcagtcggtcctccatatctgcggggtttacaggtgtttattgaaccaacaatagatcaaaaatattttgag-aaaaaaa-tccccgaagtttcaaaaagcaaaaaactatgttgaatcgacacaaattgagt--ggtgtataggctgtgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttctatgcaattgctatgctatt-----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56589667 426 + 60714840 CATCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCATGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCAAGATGAAACATTTGCAGAGTCACAGGTCTTGTTAGTCTCATCTCCACGGGATACACATATCAACACATCATCTTTCA---TACTATAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatgttttgag-aaaaaaa-tcccccaagtttc-aaaagcaaaaaactatgttgaatcgatacaaatcgagt--ggcgtgtaggctgcgtcaggaattataagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaattgctaggctttttgttgttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103248602 414 - 106955855 cttccaaagatgcagcacataggaggttccaaGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCTCATCTCCACGGGG-ACACATATCAACACATCATCTTTCA---TACTAGAAATATAcagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaagtataaatcaaaaatagtcaaag--aaaaaa-tccacaaagttccaaaaagc--aaaactatattgtatggacacaagtgaggt--ggtgtgtaggctgtatcaggaattacaagtaatcaagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaaacgctgtgccatt--------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55635325 411 + 59248254 CTTCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTGTCATCTCCACGGGG-ACACATGTCCACACATCATCTTTCA---TACCATAAATACAcagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaatattcagagaaaatata-----caaagtttc-aaaagc--aaaactatgttgaatggacacaaatggagt--ggtatgtatgctttgtcaggaattataaataatctagagatgatttcatgtatacatgagggtgtgcatgggttatatgcaattgctatgccTTt--------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47706688 420 + 51301725 CGTCCACAGATGCAGCGCATAGGAGGTTTCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATGTCCACGGGG-ACACATGTCCACACATCATCTTTCA---TACCATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTATTGAACCaactataaaccaaaaatattttgagaaaaaaaaatccccgaagttcc-aaaaccaaaaaaccatgTTGAATGAACACAAATGGAGTGGGGTGTGTAGGCTGTGTCAGGAattataagtaatccagagatgatttCATGTATGCAGGAGGATGTGCATGGGTTATAGGCAATTagtatgttttt--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387429 416 + 50890351 CATCCACAGATGCAGCTCATAGGAGGTTGCAAGGATCGTGAATCAGAGGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTTCAAGATGACACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCtccacaggg-acacatgtccacacatcatc-ttca---tactataaatacacagtcgcttctccagacctgtggggtttacaggtgtttattgaaccaactataaatcaaaaacattttgagaaaaaaaa-tccccgaagttca-aaaaccaaaaaaccatgttgaatggacacaaatggagt--ggggtgtaggctgtgtcaggaattataagtaatccagagatgatttcatgtatacaggaggatgtgcatgggttatatgcaattaggatgccctt--------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=3230.000000 s hg38.chr19_GL949753v2_alt 463258 8 + 796479 tttttttt s panTro4.chr19 59655665 8 + 63644993 tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590093 8 + 60714840 tgttgttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55635736 8 + 59248254 tttgtttt i macFas5.chr19 C 0 I 1921 s papAnu2.chr19 47707108 3 + 51301725 ttt----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387845 8 + 50890351 tttttttt i chlSab2.chr6 C 0 I 11 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103249016 0 - 106955855 C e rheMac3.chr19 60531026 4917 + 64156825 T a score=337482.000000 s hg38.chr19_GL949753v2_alt 463266 307 + 796479 tgagacag--tctcactctctcacccaggctggagtgcagtggcgtgatctcaactcactgcaacctccgccttccaggttcaagcgattctcttccctcagcctcctcagtagcctcccctaggattacaggcacgtgccaccctgcacagataaattttt-----ttgtgtgtgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgaccttgtgatctacccagctcagcctcccaaagtgctgggattacgggcgtgagccacggtgcccagcttcactatgccatt s panTro4.chr19 59655673 307 + 63644993 tgagacag--tctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagcgattctcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttt-----gtgtgtgtgtatttttagtagagatggggtttcagaatgttggacgggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcatgagccacggtgcccagcttcactatgccatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590101 303 + 60714840 tgagacag--tctcagtctctcacccaggctggagtgcagtggcgcgatctcagctcactgcagcctccccctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctaggattacaggcatgtgccaccatgcacagataaattttt-----tt---tat-tatttttagtagagatgggctttcagaatattggaccggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattccaggcgtgagccagggcgcccagcttcactatgccatt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55637665 297 + 59248254 -----cggagtctcactctctcacccaggctggagtgcagtggcacgatctcagctcactgcaacttctgcctcccaggttcaagtgattctcttgcctcagcctccccagtag------ctaggattacaggcacgtgccaccatgcacagataaattttttttcgtt------gtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttggaattacaggcgcgagccaccacgcccagcttcactgtgccatt i macFas5.chr19 I 1921 C 0 s papAnu2.chr19 47707111 297 + 51301725 tgagacagaatctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttctagcgattcttttgcctcaacctccccagtag------caaggattacaggcatgtgccaccatgcgcagataatctttt-----tt------gtatttttagtagagatgaggtttcagtatgttagacaggctggtttcgaactcctgacctagtgatccacccaactcagcctcacagagtgctgggattacaggggtgagccaccacgcccagcttcacTGTGACATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47387864 297 + 50890351 aaagacagaatctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttcaagcgattcttttgcctcagcctccccagtag------ctaggattacaggcatgtgccaccatgcacagataatctttt-----tt------gtatttttagtagagacgtggtttccgtatgttggacaagctggtctcgaactcctgacctcgtgatccacccaactcagcctcacagagtgctgggattacaggcatgagccactgcgcccagcttcactgtgccatt i chlSab2.chr6 I 11 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10 103249016 0 - 106955855 C e rheMac3.chr19 60531026 4917 + 64156825 T a score=183513.000000 s hg38.chr19_GL949753v2_alt 463573 114 + 796479 tcatgcaaggggcttgagcatctgcagattttggtatctgaatgggga-------tcctggaaccaatcacccaggtatagtgaaggacCATGGTATATAATTTTTATTTGTCAATCTTAA s panTro4.chr19 59655980 114 + 63644993 tcatgcaagaggcttgagcatctgcagattttggtatctgaatgggga-------tcctggaaccaatcacccaggagtagtgaaggaccacGGTATATAATTTTTATTTGTCAATCTTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590404 113 + 60714840 tcatgcaagaggcttgagcatctgcagattttgatatctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggaccactgTATATAATTTTTTTTTGT-AATCTTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249016 121 - 106955855 tcatgcaagatgcttgaacacctgccgattttggtgtctggtagggagggggttttcatggaaccaatcacccatgaatagtgaaggacaactgTATATAATTTTTATTCATCAATTTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55637962 114 + 59248254 tcatgcaagaggcttgagcatctgcagattttggcatctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggactactgtatataatttttatttgccaattttaa i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47707408 114 + 51301725 TCACGCAAGAggcttgagcatctgcagattttggtctCTGAatgggga-------tcctggaaccaatcacCCAGGAATAGTAAAGGACAACTGCATATAATTCTTAtttgccaattttaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388161 114 + 50890351 tcatgcaagaggcttgaggatctgcagattttggcctctgaatgggga-------tcctggaaccaatcacccaggaatagtgaaggacgactgtatataattcttatttgtcaattttaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=473660.000000 s hg38.chr19_GL949753v2_alt 463687 311 + 796479 AAATAAAGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctgagtcctctgattt s panTro4.chr19 59656094 311 + 63644993 AAATAAAGCCTAAAAAATTTACAACAACAAGATAAAAATTAAGAAGCGTTTTTAAAgtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttacagaaccccttaaaatttggtaacctcagtcctctgattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590517 310 + 60714840 AAATAAAGCATAAAAAAAGTACAACAAGAAGATAAAAA-TAAGGAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttattttttgagaaaatattctattccaccttcaactacatggcagcctttgtcaactataaagggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcactttatgtaaccttatagaaccccttaaaatttggtaacctgagtcctctgattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103249137 303 - 106955855 AAATAAATCATCAA--------AATAATAAGATAAAAAATAAGCAGTGTTTTTACGGtgtgaaaataagcttagatttattttttcctatgtgtaaccctctggtccagtgtcatttattgagaagacattctattccaccttaatccacacggcagcctctgtcaactacaaagggactgtgtgtgcacagatgtattttacacactgttttctgctcagtggctgtctgtgtccactctcatgaggatgctgcactttatgtagccttatagaaccccttacaatttggtagcctgaatcctcaaattt i nomLeu3.chr10 C 0 N 0 s macFas5.chr19 55638390 310 + 59248254 aaataaaGCATAAAAAATGTATAACAACAAGATAAAATATAAGAAGTGTTTTtataatgtgaggataagttcagatttattttttcctacttgtaaccctgtggtcctgtgttatttgttgagaaaatattctattccaccttaaaccacatggcagcctttgtcaactataaaggagctgtgtgtccacggatgtattttagacacaattttctgccccgtggttctctgtatcccctctcatgaggatgctgtactttatataaccttggagaaccccttaaaatgtggtaacctgagtcctctg-ttt i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47707522 307 + 51301725 aaataaagcataaaaaatttacaacaggaaaataaaaaataagaagtgttTTTATAGTGTGAGGATAAGTTTAGATTGATTTTTTCCTACGTGTAACCCTATGGCCCTGTGTTATTTGTTGAGA----ATTCTATTCCACCTTAAATCACATGGCAGCCTGGGTCAACTGTAAAGGGACTGTGCATCCATGGGTGTATTTTAGACAGTCTTTTCTGCCCAGTGGCTCTCTGTATCCCCTCTGATGAGGATGCTACACTTCATGTAACCTTATAGAACCCCTTAAAATTTGGTAACCTGAGTCCTCTGATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388275 290 + 50890351 aaataaAGCATAAACAATTTACAACAATAAAATAAAAAATGAGAAGTGTTTTTATAGTGTGAGGATAA-TTTAGA----------------TGTAAGCCTGTGGCCCTGTGTTATTCGTTGAGA----ATTTTATTCCACCTTAAACCACATGGCAGCCTGTGTCAACTGTAAAGGGACTGTGCATCCACGGGTGTATTTTAGACACTCTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTGATGAGGATGCTACACTTTATGTAACCTTATACAACCCCTTAAAATTTGGTAACCTAAGCCCTCTGATTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=158737.000000 s hg38.chr19_GL949753v2_alt 463998 129 + 796479 gttattATAGGTTATTTAGtttgc----------tttttttt----------tttcttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcaacctccgcctcccaggttcaagctattct s panTro4.chr19 59656405 139 + 63644993 gttattATAGGTTATTTAGtttgctttttttttttttttttt----------tttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590827 133 + 60714840 gttattATAGGTTATTTAGtttgc------tttttttttttt----------tttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638700 142 + 59248254 gttgttATAGGTTATTTAGTTTCC-----ttttttttttttt--tttctttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47707829 134 + 51301725 GTTATTATAGgttatttagtttgc-----ttttttttttttt----------ttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcctcccaggttcaagcaattct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47388565 144 + 50890351 GTTATTATAGGTTACTTAGTTTGC-----tttttttttttttttttttttttttccttgagacagactcttcctctgtcacccaagctggatttcagtggcacaagctcagctcactgcaacctccgcatcccaggttcaagcaattct i chlSab2.chr6 C 0 I 472 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=3580.000000 s hg38.chr19_GL949753v2_alt 464127 6 + 796479 gatgcc s panTro4.chr19 59656544 6 + 63644993 cgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590960 6 + 60714840 cgtgcc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55638842 6 + 59248254 tgtgtc i macFas5.chr19 C 0 T 2143 s papAnu2.chr19 47707963 6 + 51301725 cgtgcc i papAnu2.chr19 C 0 I 398 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47388709 472 + 50890351 I e rheMac3.chr19 60531026 4917 + 64156825 T a score=467887.000000 s hg38.chr19_GL949753v2_alt 464133 621 + 796479 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTCTTGTCACAATTACTCTGATAATGTTAATAATACCTGTTAGACATTTTGCACATTACATATGAAGAAGAGTTTGAATCTCAGATAAA---AACAAAAATACATCAAAAATCTTTAATGTAAGCACAGAATTCAATCATCTCGTGTATGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCGT--------------------AGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGATCGGGGCCCAGAGTTGGAGATATAGGCCTGGAAGTGGAGTTATGGGCCTAGAGATGGAGTGATGGGCCTAGAA-GTGGAGATCTGGGCCT s panTro4.chr19 59656550 618 + 63644993 tcTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTTTTGTCACAATTACTCTGATAATGTTAATAATACCTCTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAA---AACAAAAATTCATCAAAAGTCTTTAATGAAAGCACAGAATTCAATCATCTCGTGTGTGAGAGTTTGGATCTGAGACGTCTTTTGAGTCTGGTCAT--------------------AGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAAAAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGGGAGGGAGTGCGGGGATGGAGATCTCGGCCTAGAGGTAAAGATCTGGGCCTGG-AGTGGAGATATGGGTCT-GATGTGGAGATATGGGCCT-GGA-GTGGAGATATGGGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56590966 638 + 60714840 tcTGGTTTAGTACTAGAAACTCAAACAGGAAAATTAGAATGGCTTTTTGTCACAATTACTCTGATAATGTTAATAATACCTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCCGATAAA---AACACAAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTGGTGTGTGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGATCATAGTGAACAATGCAAGGTGGCAGTGAACGATGCAAGATGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAAAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGGAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAATCGAGAGAGGGAGTGAGGGGATGGAGATCTCAGCCTAGAGGTAAAGATATGGGCCTGG-AGTGGAGATATGGGTCT-GATGTGGAGAAATGGGCCT-GGA-GTGGAGATATGGGCCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47708367 620 + 51301725 TCTGGGTTAGTACTAgaaattcaagaaggaaaattaGACTGACTTTTTGTCACAATTACTCTGATAATGTTAATAGTATCTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTgaatctcagataaaaacaacaaaaatacatcaAGAGTCTTTAATGTAA-CCCAGAATTCCATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAG-CTGGTCAT--------------------AGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTAGAGGCCCGCTGGGCGTCATGCAAGGTACGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTCAACTGCACAGGCAGGGCGCCAGATAACATCCTGTGCACTGCTGAACTGAGCTGGGGCACGGCCGCCTGTCTGCACCAGCAGCACCATGTCGCTCATGGTCATCAGTGTGGCGTGTGTTGGTGAGTCCTGGAAGGGAATTCATGGAGGGAGCACTGGG-TGGAGATCTGGGCCCGGAGGTGGAGATATGGGCCTAGAGGTGAAGATACGGGTCTAGAGGTGGCGttatgggcct-gga-gtggagatctgGGCCT i papAnu2.chr19 I 398 I 1348 s chlSab2.chr6 47389181 612 + 50890351 TCTGGTTTAGTACTAGAAATTCAAGAAGGAAGATTAGACTGACTTTTTGTCGCAATTACTCTGATAATGTTAATAGTATCTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAATACATCAAAAGTCTTTAATGTAA-CCCAGAATTCCATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAG-CTGGTCAT--------------------AGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTGCTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGGAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGCCGCTCATGGTCATCAGCGTGGCGTGTGTTGGTGAGTCCTGGAAGGGAATTCACAGAGGGAGCGCTGAG-TGGAGATCTGGGCCCGGA-GTTGAGATATGGGCCTAGAGGTGGAGATATGGGCCTAGAGGTGGAGATATGGGTCT-AGAGGTGGAGAT-------- i chlSab2.chr6 I 472 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=8514.000000 s hg38.chr19_GL949753v2_alt 464754 18 + 796479 GGAGTGGAGATATGGGCC s panTro4.chr19 59657168 18 + 63644993 GGAGTGGAGATCTGGGCC i panTro4.chr19 C 0 I 18154 s ponAbe2.chr19 56591604 18 + 60714840 GGAGAGGAGATACAGGCC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710335 18 + 51301725 GGAGGGGAGATATGGGTC i papAnu2.chr19 I 1348 C 0 s chlSab2.chr6 47389793 7 + 50890351 -----------ATGGGCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=32122.000000 s hg38.chr19_GL949753v2_alt 464772 60 + 796479 TGGA-------------------------------------GGTTGAGATATGGGCCTGCAGTAGAGATATGGGCTTGTAG-TGGAGACATGGGCCTG s panTro4.chr19 59675340 98 + 63644993 TGGAAGGGAGATAGGAGCCTGGACTGGAGATATTGGCCTGGGGTGGACATATGAGACTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTG i panTro4.chr19 I 18154 C 0 s ponAbe2.chr19 56591622 59 + 60714840 --------------------------------------TGGAGTGGAGATACAGGCCTGGAGTGGAGATATGGGCTTGGGG-TGGGGATATGGGCCTG i ponAbe2.chr19 C 0 I 11222 s papAnu2.chr19 47710353 60 + 51301725 -------------------------------------TAGAGGTGGAGttatgggcctggagtggagatatgggcctggag-tGATGAcgtgggcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389800 60 + 50890351 -------------------------------------TAGAGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAG-TGGAGATCTGGGCCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=38651.000000 s hg38.chr19_GL949753v2_alt 464832 62 + 796479 GAGATGGAGATATGGGCCTGGAGATGGAGATATGGGCCTGCAGTAGAGATATGGGCCTGGA-G s panTro4.chr19 59675438 62 + 63644993 GAGGTGGAGATATGGGCCTGGAGGTGGAGTTACGGGCCTCTAGTAGACATACGGGCCTGGA-G i panTro4.chr19 C 0 I 27730 s ponAbe2.chr19 56602903 62 + 60714840 GAGGTGGAGTTATGGGCCTGGAAGTGGAGTTATGGGCCTGAAGTGGAGATCTGGGCCTGGA-G i ponAbe2.chr19 I 11222 C 0 s papAnu2.chr19 47710413 60 + 51301725 -gagtggagataagggcctgg-ggtggagatatgggcctagagtggagatatgggcctgga-g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389860 61 + 50890351 -GAGTGGAGATCTGGGCCTGG-AGTGGAGATATGGGCCCGGAGTTGAGATATGGGCCTAGAGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=4874.000000 s hg38.chr19_GL949753v2_alt 464894 6 + 796479 TGGAGA s panTro4.chr19 59703230 6 + 63644993 TGTAGA i panTro4.chr19 I 27730 C 0 s ponAbe2.chr19 56602965 6 + 60714840 TGGAGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710473 6 + 51301725 tggaga i papAnu2.chr19 C 0 I 224 s chlSab2.chr6 47389921 6 + 50890351 TGGAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=21889.000000 s hg38.chr19_GL949753v2_alt 464900 33 + 796479 TATGGGCCTGGA-GTGGAGATATGGATCTGGAGG s panTro4.chr19 59703236 32 + 63644993 TAtgggcctgga-gtggagatatgggtctgga-g i panTro4.chr19 C 0 T 27768 s ponAbe2.chr19 56602971 32 + 60714840 TATGATCCTGGA-GTGGAGGTATGGGCCTGGG-G i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47710703 32 + 51301725 tatgggcctgga-gtggagatatgggcctgga-g i papAnu2.chr19 I 224 C 0 s chlSab2.chr6 47389927 34 + 50890351 TATGGGCCTAGAGGTGGAGATATGGGTCTAGAGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=43594.000000 s hg38.chr19_GL949753v2_alt 464933 56 + 796479 TGGAGATACGGGCCTGCAGTAGAGATATGGGCCTGGAGTGGAGATATGGGCCAGGA s panTro4.chr19 59675500 56 + 63644993 TGGAGACATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGA i panTro4.chr19 T 27768 C 0 s ponAbe2.chr19 56603003 56 + 60714840 TGGAGATACAGGCCTGGAGCAGAGATACAAGCCTTGAGTGGAGATATGGGCCTGGA i ponAbe2.chr19 C 0 I 133 s papAnu2.chr19 47710735 56 + 51301725 tggagatatgggcctggagtggagatctggacctggagtggagatatgggccaGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47389961 56 + 50890351 TGGAGGTATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATCTGGGCCTGGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=19091.000000 s hg38.chr19_GL949753v2_alt 464989 40 + 796479 G-T---------------------------------------------------------GGAGTTATGGGCCTAGAGGTGGATATCTGGGCCTGGAG s panTro4.chr19 59675556 41 + 63644993 GGT---------------------------------------------------------GGAGATATGGGCCTAGAGGTGGATATCTGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56603192 40 + 60714840 -GT---------------------------------------------------------GTAGATCTAGGCCTGGAGGTAGAGATCTGGGCCTGGAG i ponAbe2.chr19 I 133 I 44574 s papAnu2.chr19 47710791 97 + 51301725 -GtggagatctgggccaggaggggagatatgggccaggaggggagatatgggccaggaggggagatatgggTCTAGAGGTGGAGttatgggcctggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390017 40 + 50890351 -GT---------------------------------------------------------GGAGATATGGGTCTAGAGGTGGAGATATGGGCCTGAAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=24349.000000 s hg38.chr19_GL949753v2_alt 465029 38 + 796479 TGGAGATATGGGCCTAGG-AAGGAGATATGGGCCTGGGT s panTro4.chr19 59675597 38 + 63644993 TGGAGATATGGGCCTAGG-ATGGAGATATGGGCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647806 38 + 60714840 TGGAGATATGGGCCTGGG-ATGGAGATATGGGCCTAGAG i ponAbe2.chr19 I 44574 T 37293 s papAnu2.chr19 47710888 37 + 51301725 tggagatatgggcctgga-gcGGAGATATGGGCCAGGA- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390057 38 + 50890351 TGGAGATATGGGCCTAGACGTGGAGATAAGGGCCTAGA- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=69436.000000 s hg38.chr19_GL949753v2_alt 465067 152 + 796479 GTGGAGATATGGGACTGGAGAGGTGATATGGGCCTGGAGTGGAGATATGGGCTTAG-GGTGGAGATCTGGGCCTGGG-GCAGAGATATGGGACTGGATTGGAGATATGGGCCTAGGGTGGAAAT----------------------------------------------------------------------------ATCAGCCTGGAGTGGAGATATGGGCTTGTG s panTro4.chr19 59675635 228 + 63644993 GTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGG-GGTGGATATCTGGGCCTGGG-TTGGAGATAAGGGCCTGGATTGGAGATATGGGCCTAGGGTGGAGATCTGAGCCTGGATTGGAGATACGGGCGTAGATTGGCGATATGGGCTTAGGGTGGAAATATAGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGG i panTro4.chr19 C 0 T 18633 s ponAbe2.chr19 56610551 171 + 60714840 GTGGAGATCTGGGCCTGGGGTGGAGATATGGGCCTGGATTGGAGATATGGGCCTAA-GGTGGAGATCTGTGCCTGGA-TTGGAGATCCGGGCCTGGATTGGCGATATGGGCCTAGGGTGGAAAT---------------------------------------------------------ATCGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGG i ponAbe2.chr19 T 37293 C 0 s papAnu2.chr19 47710925 153 + 51301725 GCGGAGATATGGGCCAGGAGGGGAGATATGGGCCAGGAGGGGAGATATGGGTCTAGAGGTAGAGttatgggcctgga-gtggagatatgggcctggagtggagatacgGGCCTGGGATGGAAAT----------------------------------------------------------------------------ATGGGCCTagagtggagatatgggcctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390095 99 + 50890351 G-------------------------------------Gtggagatatgggtctagaggtggagatatgggcctagaggtggaggtatgggtctaga------------------ggtggaggt----------------------------------------------------------------------------atggGCCTGGAGTGGAGATATAGGCCTGGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=642778.000000 s hg38.chr19_GL949753v2_alt 465219 862 + 796479 GTGGGGATCTGGGCCTGGAAACTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTAACTTCAGCCCAGGAAGGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGTCCTGGTTTGCCTGCAGATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTCGGTTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGGGAGTCTCTCATAAACTGGGAAGAGAGGACCCTGGGGTGCTCGGCCCACATTTCTGACCTTGCC-TCCCTGGCCTCTCAACCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGG---TTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGATGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGA-AACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCGCTGATAT-CCACTCACAAAGGACATGCCCTCCACCTCATGTCTACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTTACTCAGCACTTGCTCAAAGTTCTCAGCTGAGGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGGTGTGATAGTAGCCAT s panTro4.chr19 59657230 897 + 63644993 GTGTTGATCTGGGCCTGGAGCCTGGGTCTCTCCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGGGAGGCTAAGTTTACCTTCAGCCAATCAGGGGCCTGGCTACCAAGACTCACAGCCCAGTCGGGGCAGCAAGGGAGGCCTGGTTTGCCTGCAGGTGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCAAACCTTAGGTTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTGGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGCAGACTGGGGTCCTCCAAGCTGTGCTGTGCGGCGGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACC-TAAGAGGTGGGGGAACCCCAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGCTATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCTATT-TGTGTTGTTTTACGCGAGTAATCTTGCACTATTAAAATCTAGTAAGAGTCGCTT-ATTCAGCACCTGCTCAAAGTTCTCAGCTGACACTTTTGTTGCAGGGAGATGCCATGTCTATGCGGGATGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTT i panTro4.chr19 T 18633 C 0 s ponAbe2.chr19 56610722 859 + 60714840 GTGGGGATATGGACCTGGAGGCTGGGTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGTTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCGTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTCAGGGTGTCATCTCCCCACATAAGAGGATTTCCCCAAAATGGGAGGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGACCGCAGTTCTGACCTCGCC-TCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTGTGGGGAGCAGGG---TTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGA---------------------------------AGTGGTAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGA-AACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCGTTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTT-ACTCAGCACCTGCTCAAAATTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGGGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAACAGCCAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711078 860 + 51301725 gtggagatctgggcctggaggCCGGGTCTCTGCACAGATGAGAGCCCTGTTCTTGGGGGCAGGTAGGCAGAGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTGACAGCCCAGTGGGGGCAGCAAGGGAGGCCTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGGCCACATGAGGGTGAGTCCTTCCCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGG---TAAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGA---------------------------------AGTGCTAGGAACAGCAGGTCCTCTGAGGACATAGGTGTGACTCACACACTTGAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCCGCTGATGGGGGCTCAgctgtttatttttgttcaggCATCGGCTGGTATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTTTATGTGAGTCATCTTGCAGTATTAAAATCTAG---GAGTCGCTT-ACACAGCACTTGCTCAAAGTTCTCAGCTAACAC-TTTGTCGCAGGGAGACACCATGTCTTTGCGGAATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47390194 860 + 50890351 GTGGAGATATGGGCCTGGAGGCTGGGTCTCTGCACAGCTGAGAGCCCTGTTCTTGGGGACAGGTAGGCAGTGAGTGTGAGTTTACCTTCAGCCCAGGAAAAGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGGCTTAGTTTTCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGAGGGCCTGTCCACATGAGGGTGAGTCCTTACCCAAACGTTAGGGTGTCCTCTCTCCATGTAAGAAGATTTTCCTGAAACAGGAGGGAAGTCCTGTCCAGGAGTCTCTCATCAATTAGGAAGAGGGGACGCTCGGATACTCAGCCCACAGTTCTGACCTCGCCCTCCCCAGCCTTTCTTTCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAGGG---TGAGACTGGGGTGCTCAAAGCTGGGGTGTGGAGGGGGGA---------------------------------AGTGCTAGGAACAGCAGGACCTCTGAGGACATAGGTGTTACTCACACACTTGAGTGTTTCCATGACGGTAGGGCCTGCAGTGTGGCTGCTGCCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGGCCCTGACATTCCAAATCTGCTGATGGGGGCTCAGCTGTTTATTTTCGTTCAGGAATCGGCTGATATTCCATTCACAAAGGACATGCCCTCCACCCCGTGTCTGCCTTGTGTTGTTTTATGTGAGTGATCTTGCAGTATTAAAATCTAA---GAGTCGCTT-ACTCAGCACTTGCTCAAAGTTCTCAGCTAACAG-TTTGTTGCAGGGAGATGCCATGTCTTTGCGGGATGGGTCCTTCCTTTAGCCCTGGGCACCCAGGTGAGGTAGGAGCCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=348751.000000 s hg38.chr19_GL949753v2_alt 466081 392 + 796479 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGTTCCACATCCTCCTCTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCTAGGA---CATGTCATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTTCAGTCTGTACAAGGAAGGTGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCCGCACA-ACAGGGACATACAGATGTCGGGGTTC--ACACACACACTCCCCCAGTGGGTGGTCAGCA---CCCAGCAACCCCCTGGTGATCGTGGTCATAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59658127 393 + 63644993 AGAAA-GTGGAAAT--GGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCTTCCTGTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGTCTGAAGGAGAATATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGAGTATTCCGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGTCGGGGTTC--ACACCCACACTTCCTCACTGGGTGGTCGGCA---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611581 390 + 60714840 AGAAACGTGGAAAGTGAGGAGAA---TCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCCAGGA---CATGTGATTCTTCAGTGTCATTCTTATCTTAGGTTTAACAACTTCAGTCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACAAAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCAGCACACGCAGGGACCTATAGACGTTGGTGTTC--ACACCCACACTCCCCCAGTGGGTGGTCGGCA---TCCAGCAACCCCCTGGTCATCATGGTCACAGTTCAGAGGGCTCCTGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47711938 384 + 51301725 AGAAACATGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGCTCC------GCCTCTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCGGCCTGGCCCAGCCCTGTGATGTCTCCAGGA-----TGTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAGATTCAGTCCGTACAAGGAAGACGGGGTGCCTGTCCCTGAGCCCTACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCCA-CACATGCAGGGACCTACAGATGTGGGGGTTC--ACACCCGCACTCCCCCAATGGGTGGTTGGCT---CCCAGCAACCCCCTGGTGATCACGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391054 384 + 50890351 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACACGGAGGGTGGGGCGGCTCC------TCCTCTCTAAGGTGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTTGGCCTGGACCAGCCCTGTGATGTCTCCAGGA-----CGTGACTCTTTGGTGTCACTCTTATCTTGGGTTTAACAACGTCAGTCTGTACAAGGAAGATGGGGTGCCTGTTCCTGAGCCCTACAACAGAATATTCTGGAACAGCTTCCTCATGGGCACTTTGATCCCA-CACATGCAGGGACCTACAGATGTCCGGGTTC--ACACCCACAATCCCCCAAAGGGTGGTCGCCT---CCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770027 390 + 49145316 AGAACAGTGGGAAG--AAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCAC-ACTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 T 3003 I 914 e canFam3.chr1 102921257 36846 + 122678785 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=434578.000000 s hg38.chr19_GL949753v2_alt 466473 554 + 796479 TTGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCATGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGTGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatgtatgttataggggaagggactgaaggggaagatggagctca-------------------------tggggagacagcctggactgtcccactgggctcagtgtaatcacaagggtgcac-atgaaaggaggaggaagaggggagtggggattagagcagtccagtggaagtcttcaccagctttgaaggtggaggaaggccaagagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcca--gagtctccagaggaaacgaagccctgcagatgccttgattttagcccaggaaaaatagggtccaatttctgtctccagtactggaaggtgtcagtgtggtctctcctgcttccatgcttctgataattt s panTro4.chr19 59658520 579 + 63644993 TGGGATGCTCCTTGTCCCACCTCCTGAGTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAGGGGGATTGAATGCAGGGAAATGGCTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataagggaagggacagaaggggaagatggagctcaggttgttgattagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtaatcacaagtgtccac-atgaaaggaggaggaagaggggagtggggattagagcagcataatgggagactcagtcagctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcct--gagtctccagagggaacacagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctgtctccagaattggaaggggtcagtgtgctctctcctgctgccatgcttctgataattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56611971 579 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaacaattctccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaatgaaaggaggaggaagaggggagtggggattagagcagcgtaatgggagtctccctcagctttggaggtggaggaaggccgtgagccacgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcct--gagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaaaagggtccgatttctctctctagaattggaagGAGTCAATGTGCTCTCTTCTGCTGCCAT-CTTCTGATAATTT i ponAbe2.chr19 C 0 T 19007 s papAnu2.chr19 47712322 578 + 51301725 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCAAT-ATGGCTACATTCTAATCCCTGGAGCCTATGACTCTTTATGCTATAGGGCAGGGGACTGAAGGGGAAGACGGAGCTCTGGTTGTTGATGAGTTaaccttgagatggggagacGGCCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGACCAC-ACGAGAGGAGAAGGATGAGGGGAGTGGGGATTAGAGCAGCGTCGTGGGAGACTCCATCCGCTTTGAAGGTGCAGGAAGCCCATGGGCCACCAATGCAGGTGACCTATAGAGTCTGGAAAAGTCAAGGAACTGATTCTCCC--AAGTCTCCGGAGGGAACGCAGCCCTGCAgatgccttgattttagcccaggaAAAACAGGGTCCAATTTCTGTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccttgctTCTGATAATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47391438 581 + 50890351 TGGGCTTCTCCTTGTCCCACCTCCCGAACCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGATTTGGTCACCCAGGCCCTGACTTTATTTGGGGTGAAGGGGGATTGAATACATGGAGATCGGTGCtgtgatgggaagaataactgtccccaatgatggctacattctaatccctggagcctgtgactatttatgctatagggcaggggactgaaggagaagacggagctctggttgttgatgagttaaccttgagatggggagatggcctgaactgtcccgctgggctcagtggaatcacaagggaccac-acgagaggagaaggaggagggcagtggggattagagcagcatagtgggagactccatctgctctgaaggtgtaggaagcccatgggccaccaatgcaggtgacctatagaggctgaaaaagtcaaggaactgattctcccctgagactccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctgtctccagaagtggaaggggtcagtgtgttctctcctgctgccttgcttctgataattt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=44210.000000 s hg38.chr19_GL949753v2_alt 467027 58 + 796479 tgtacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAAC s panTro4.chr19 59659099 58 + 63644993 tctacagcagcaacaggaaaccaacacTGGAACCCAGCTCAAGGACAAGATAAGAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56593543 58 + 60714840 tctccagcaacaacaggaaaccaacacaggaacccaggtcaaggacaagttaaaaaac i ponAbe2.chr19 T 19007 I 39815 s papAnu2.chr19 47712900 58 + 51301725 TCTACAGTGGCAACAGGAAACCAACACTGGAATCCAGGTCATGGATAAGTTAAGAAAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392019 58 + 50890351 tctacagcggcaacaggaaaccaacacTGGAATCCAGGTCATGGACAAGTTAAGAAGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=496084.000000 s hg38.chr19_GL949753v2_alt 467085 641 + 796479 AACCCAAGGAAagccaggcatggtggcaggcgcatgtaatcctagcgactcaggaggctgagggcaggagaatcacttgaacccaggaaacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaaaaTTAATTAATTAATTAAagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCGACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTATTCATCAGTTCATACCTTCTGCCAAGGATTGCAATTCATCCAAAAGAGATTGAACAAGGCTGATAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTTCACCCCCACATAAACAGCAGGAAAGACGTTAGTGTGAAATAGATACAACACCCCAAGAGATGAGGCTAAGCCCAGTGGGAAGGGAATCAGAGGCTACTagagacagagggacagagaagagggagggagacagaTGGAA s panTro4.chr19 59659157 626 + 63644993 GACACAAGGAtagccaggcatggtggcaggtgcatgtaatcctagcgactcgggaggctgagggcaggagaatcagttgaacccaggaggcagacgttgcagtgagcctagaccacaccacttcactccagcctgggcgaaggagtgagactctgtctctaaaaTTAATTAATTAATTAAagaaaccaaacaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgataatcctccaaccagcaccaggagccagcctatggaagctggcac--------------aggcatggcaagagtggctcccagTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACATGCAGCCAATCCTGGTTCCTCTTCCACCCCCACATAGA-AGCAGGAAAGACATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAATCAGAGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGGAGACAGATGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633416 639 + 60714840 gacacaaggatagctgggcatggtggcaggcccatgtaatcctagtggctccggaggctgagggcaggagaaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaaaaTTAATTAATTAATTAAagaaaccaaacaaggggaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggttgatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATC--AGGCTACTAGAGACAGAGGGACAGAGAAGAGGGAGGAAGACGGATGGAA i ponAbe2.chr19 I 39815 C 0 s papAnu2.chr19 47712958 639 + 51301725 GGCCCAAggatagccgggcgtggtcgcaGGCGCATGTAATCttagcgactcgggaggctga-ggcaggagaatcgcttaaacccaggaagcagaggttacagtaagctgagaccacaccacttcactccagcctgggcgaaggagtgagactctctctccaaaattaattaattaattaaagaagcCAAACAAGGAAAAGGTTGGCAACCCCGAGATCAGCAAGGGCGGGACGCTGATGCCACCGCCAGGTTCGATCCACAAAGAGAGGGGCTGATAGTCCTCGAACCAGCACCAGGAACCACCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATA-TGTCTGCCAAGGACTCCAATGTGTCTGAAAGAGATTGAACCAGCCTGCTAAGAGCCTGGACATGCAGCCTGTCCTGGTTCCTCTTCCACCCCCATGTAGACAGCCGGAAAGAGATGAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCAGGGGCTactagagacagagagacagagaagagggtgggagacagaaggaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392077 634 + 50890351 GGCCCAAGGAtagccgggcgtggtcgcaggcacatgtaatcctagtgactcgggaggctga-ggcaggagaatcgcttaaacccaggaggcagaggttgcagtaaaccgagaccacacctcttcactccagcctgggcaaaggagt--gactctgtctccaa----aaTTAATTAATTAAagaagccaaacaaggaaaaggttttcaaccccgagatcagcaagggcaggacgctgataccatcaccaggttcgatccacatagggaggggctgatagtcctcgaaccagcaccaggaaccaccctatggaagctgtcaccatggagaaggcacagagatggcaagagcggctcccaatccccaccagaaacagggagtgtggacactggtgcctgccttactgatcagttcatacttcctgccaaggactccaatgtgtccaaaagagattgaaccgggctgctaagagcctggacatgcagcctgTCTTGGTTCCTCTTCCACCCCCACGTAGACAGCCGGAAAGAGATTAGTGCGAAATAGATACAGCAGCCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAATCATGGGCTACTagagacagagagacagagaagagggagggagacagaTGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921257 36846 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=63073.000000 s hg38.chr19_GL949753v2_alt 467726 74 + 796479 GGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGACA-GACACCAG---- s panTro4.chr19 59659783 75 + 63644993 GGACCTGCACCAGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGATAAGACACCAG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634055 74 + 60714840 GGACCTGCACCAGGAGATATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGACA-GACACCAG---- i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47713597 74 + 51301725 ggaCCTGAAACAGGAGTTAAGGGCACAGAAAAGAAcatggaga--cacagagaggaaggagag------agaaa-gacaccAG---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392711 74 + 50890351 GGACCTGCACCGGGAGTTAAGGGCACAGAAAAGAACATGGAGA--CACAGAGAGGAAGGAGAG------AGACA-GACACCAG---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958103 85 + 122678785 GGCCATGTTCTAGG-GACAGGGGCTGAAAAATGGCCGGTGAGGGTCATGGAGATGAAGGACATCCACTCAGAGA-GACAAGAGGAGC i canFam3.chr1 I 36846 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=20940.000000 s hg38.chr19_GL949753v2_alt 467800 33 + 796479 CAAGGGGAAGCCTCACTCA----TTCTA-------------GGTGCCATG s panTro4.chr19 59659858 33 + 63644993 CGAGGGGAAGCCTCACTCA----TTCTA-------------GGTGCCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634129 33 + 60714840 TGAGGGGAAGCCTCACTCA----TTCCA-------------GTTGCCATG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47713671 33 + 51301725 GGAAGGAAAGCCTCACTCA----TTCCG-------------GATCCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392785 33 + 50890351 GGAGGGGAACCCTCCCTCA----TTCTG-------------GATCCTGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 30 + 49145316 CGAGGGAGAGCTTCACCC-------TGA-------------GGTCCCAGG i calJac3.chr22 I 914 C 0 s canFam3.chr1 102958188 50 + 122678785 TGAGAGGGGGTCCCACACAGAGTCTCTGGAGAGACGAAGGTGGTCCCCCA i canFam3.chr1 C 0 T 202 e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=338794.000000 s hg38.chr19_GL949753v2_alt 467833 367 + 796479 GATGGGAT-GATAAAGAGAGACACCTTCTAAACTCACAACCTCTCTTCTTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAGGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAA--------GTATAAGGACACTTTGCACCTCATTGGAGAGCACCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGATGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTCATCACAGGTGAGAGTGTCCGGAC s panTro4.chr19 59659891 367 + 63644993 GATGGGAT-GATAAAGAGAGACACCTTCTAAACTCACAATCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAT--------GTTTAACGACACTTTGCGCCTCATTGGAGAGCACCATGATGGGGTCT------CCAAGGCCAACTTCCCCATCGGTCGCATGACGCAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTCTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634162 367 + 60714840 GATGGGAT-GATAAAGAGAGATGCCTTCTAAACTCCCAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGA--------GTTTAACGACACTTTGCGCCTCATTGGAGAGCTCCATGATGGGGTCT------CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACCTACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGAGTGTCCAGAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47713704 367 + 51301725 GATGAGAT-GAAAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGGAA--------GCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGTT------CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCTCCCAGTGACCCCTTGGACATCGTGATCACAGGTGAGAGTGTCAGGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47392818 368 + 50890351 GATGAGATAAAAAAAGAGAGACGCCTTCTAAACTCACAAATTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAGTGCTGGTCAGATATCAAGTTTGAGCACTTCCTTCTGCACCGAGTGGGGAA--------GCTTGAGGAGCCCTTGCGTCTCATCGGAGAGCTCCATGACGGGGGCT------CCAAGGCCAATGTCTCCATCAGTCCAGTGACACCTGCCCTGGCAGGGACCTACCAATGCTACGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGCCCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771361 372 + 49145316 TGAGGGGT-GAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGAACTTGACACGAGGTTGGAG--------GCTGGGACTTACTACGTCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 C 0 I 625 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=11963.000000 s hg38.chr19_GL949753v2_alt 468200 17 + 796479 ATTCT---CATTGTCATTGG s panTro4.chr19 59660258 20 + 63644993 ATTCTTCTCATTTTCATTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634529 20 + 60714840 ATTCTTCTTATTGTCATTGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47714071 20 + 51301725 ATTCTTCTCAATGTCACTGG i papAnu2.chr19 C 0 M 1510 s chlSab2.chr6 47393186 20 + 50890351 CTTCTTCTCATTGTCACTGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=209757.000000 s hg38.chr19_GL949753v2_alt 468217 423 + 796479 GCTGCAGAGTGAATGATCCACGACTTGGAACCCCCAGGTAGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGCTGAGGTTTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACGGAGgacagacacaggggccatacagggagttagaaaagacagaaagagttaaaggaga----cagacagacagacaTGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGATAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAG--GCCATGTTTATTCTGACACCTCTGCC s panTro4.chr19 59660278 424 + 63644993 GATGCAGAGTGAATGATCCAGGACTTGGAGGCCC-AGCTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGACAGAAGGAGTTAAAGGAGA----CAGACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGACACCTGGCACAGGTTAGAAGTTTCATTTGTGTTTTACCTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCCGTGGCCTCAGGCCTTGTGGCACCTACAGATGTCGTGGTTATTCTGACACCTCTGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634549 424 + 60714840 GATGCAGAGTGAATGATCCAGAACTTGGAGGCCC-AGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAGTTAAAGGAGA----CAGATAGACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCAAGTTTATTCTGACACCTCTGCC i ponAbe2.chr19 C 0 T 21269 s chlSab2.chr6 47393206 428 + 50890351 GACACAGAGTGAATGATCCTGGACTTGGAGGCCC-AGGTGGTTGTAAGGAAAATGTGCATGGGATTCTTATGGAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAGCAGGAGACACAAGCACAGACCAGGTGTCGTAACAGAGGACAGACACAGGGGCCATACAGGGAGGTAGAAAACAGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGACATGTCCCAGAGAGAGGCGTCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTGTTACCTCCACAATGTGTTCTCTACCAGGAGAACCCAAAGACACCCACATTTCTGACCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=216146.000000 s hg38.chr19_GL949753v2_alt 468640 440 + 796479 TTCCATGTAATGGAGAGTAACCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAAAGGATCACTGAGAGGCACAGAGAGAAATCAGGAACACCAAAAAGCAAAGACATAAACACACAGAGAATGGGCCAGAGGAAGGAGATTGAGAGACTCACTGACACATAAAGAGAGAGAAAAGAGGGCAGAGGAGTGGTGAGAATGATGGAAGGGAGCAGAGAAAAGCACTAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAACTGCAGAGATTCCAAAGAGAACTAGAGAGACCGAGAGGCAGAGCAagacagatgatagatg----gatagatatagatagatgata s panTro4.chr19 59660702 438 + 63644993 TTCCATGCAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGagagacacagagagaaatcagggacaccaaaaaacaaagacagaaacacacagagaaagagccagaggaaggagattgagagactcacagacacataaagagagagaa--gagggcagagaagtggagacaatgatggaagagagcagagaAAACcactaaaattagagtcctgagggcgaggcacaagggcatagaaagatggagatgtggggatgaattgcagagattccaaagagaactagagaaaccgagaggcagagcaagacagatgatagatg----gatagatatagatagatgata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56613704 440 + 60714840 TTCCATGCAATGGAGAGTAATCATCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAAAAAAGCACAAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCcaaagagaactagagagaccgagaggcagagcaagacagatgacagatg----gatagatatagatagatgata i ponAbe2.chr19 T 21269 C 0 s chlSab2.chr6 47393634 438 + 50890351 TTGTGTGCAGGAGAGAGTCATCATTCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCACACTGGATTCTGAGGCTCATATTCCAAATAACCCCACATATGATAGGATTGCTGAGAGACATAGAGAGAAATCAGGGACATCAAAAAGCAAAGGTGTAAACACAC--AGAATGAGCCAGTAGAAGGGGATTGAGAGACTCACAGACACATAA----AGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACAGAGAAAGCTGGAGATGTGGGGATGAATTACAGAGATTCCAAAGAGAACTAGAGAGACCAAGAGGCAGagaaagacagatgatagatggatagatagatatagagagatgata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60531026 4917 + 64156825 T a score=139775.000000 s hg38.chr19_GL949753v2_alt 469080 219 + 796479 aataggtagatgatagata----ataggttaaagatacatagatgatgattgattgattc----attaatagataatacatagagatgatgatgatgaagacagatag--------ataatacgt----acagatagagaggcagacaga------aatcatagagaga--gagatgatacatacatataaataac----agatgattgatgga--------tagatagacaactgatag--------atacatagatgatatatag s panTro4.chr19 59661140 219 + 63644993 aataggtagatgatagata----ataggttatagatacatagatgatgattgattgattc----attaatagatgatacatagagatgatgatgatgaagacagatag--------ataatacat----agagatagagaggcagacaga--gagaaatcatacagaga------tgatacatagatatagataat----agatgattgatgga--------tagatagacaattgatag--------atacatagatgatatatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614144 227 + 60714840 aataggtagatgatagata----ataggttatagatacaaagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatga----agatag--------ataatacat----agagttagagaggcagacaaagagagaaatcatagagagagagagatgatacatagatatagataat----agatgattgatggc--------tagatagacaattgatag--------ataaatagatgatatatag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60526109 242 + 64156825 aataggtagatggtagataacagataggttgtaggtacatagatgatgattgatggattgattgatagacagatgatacatagagataatgatgatgaagatagacag--------atgatacat----agagatatagaggcagacagagagagagat-------------agatgatacacagatatagataacacataggtgattgatggatagagagctagatagacaattgatagatacagagatagatagatgatacataa i rheMac3.chr19 T 4917 C 0 s chlSab2.chr6 47394072 249 + 50890351 aatagttaggtgatagataatagataggttatagatacatagatgatgattgcttgtttcattgattaatagatgatacatagagatgatgatgatcaagatagatagataaatatatgatacatcgagagagagagagaggcagacagagagagaaatcagagagaga--gagatggtacattgatacagataac----aggtgatggatgga--------tagatagacaattgatag----agagataaatagatgatacatag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55638848 2143 + 59248254 T a score=413580.000000 s hg38.chr19_GL949753v2_alt 469299 381 + 796479 atatagatgacaggtagagaatttgtagataggcaccgaatagataaatagatagatcgacagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAACGTGAGAAACTTAGAATT--TAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAAGAATCCAAAAAGGGAAAACA----TATCTAGAGGTGGGGAAGCGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacatgaagagagatggg-g-tggagggtgag----agagagagagagagagCATTAGGTCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCCGAGG s panTro4.chr19 59661359 372 + 63644993 atatagatgacaggtagagaatttgtagataggcactgaatagataaatatatagatcgatagataatagatagaaatatgcagaaagttatgaacaggacacaaagtgagaaactcagaatt--taaaaaagtaacatcaagtcaaccaatccaaggagAGTCAGAGAGAATAAAACAATCCAAAGAGAGAAAACA----TATCTAGAGGTGGGGAAGTGAGATCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAATAGACATGAAGAGAGATGGG---TGGAGGGTGAG----AGAGAGAG--------CATTAGGTCATAGAGCAGGGG-AGTGAGCTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCTAGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614371 375 + 60714840 atatagatgacaggtagagaatttgtagagaggcaccgaatagataaatagatagatcgatagagaatagaTAGAAATATGCAGAAAGTTATGAACAGAACACAAAGTGAGAAACTCAGAATT--TAAAAAAGTAACATTAAGTCAACCAACCCAAGGAGGGTC--AGAGAATAAAACAATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTGGAAGGAGGAAGTAGACATGAAGAGAGATGGG-G-TGGAGGGTGAG----AGAGAGAG--------CATTAGGTCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 0 380 - 21488 ATatagatgacaggtagagaatttgtagatagacaccaaatagataaatagatagcttgatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATT--TAAAAAAGTAACATCAAATCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACA----TATCTAGAGGTTGGGAAGTGAGGTCagagacctagagagacagagaaggtggaaggaggaaatagacatgaagagagatggggg-tggagggtgag----agagagac--agagagCATTAGGCCATAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACCTCCCTGAGG i nomLeu3.chr10_GL398297_2_random N 0 C 0 s rheMac3.chr19 60526351 371 + 64156825 atatagatgatagatagataatttgtagatagacaccaaatagataa----atagatcgatagataatagacagaAATATGCAGAAAGTTGTGAACAGGACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAAC-AACCCAAGGAGGGTCAGAAAGAATAAAACCATGCAAAAAGGGGAAACA----TTCCTCGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGACAAGGCAGAAGGAGAAAATAGACATGAAGAGAGAAGGG-GCTGGAGGGTG------AGAGAGAG--------CATTAGGCCATAGAGCGGGGG-AGTGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47394321 373 + 50890351 atatagat----gacagataatttatagatagaccctgaatagatca----atagatcagtagataacatatagaaatataCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTTAGAATT-AATAAAAAGTAACATCAAGTCAACAAATCCAAGGAGAGTCAGAGAGAAGAAAACAATACAAAAAGGGAAACCA----CACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTAGAGACACAGAGAAGGTGGAAGGAGGAAACAGACATGAAGGGAGACGGG-G-TGGAGGATGAGAGACAGAGAGAG--------CATTAGGTCATAGAGCAGGTGCAGTGAGTTCTCAGCTCAGATGTGAAGGGAGCAGTGACAAGGAAGAACCTCCCTGAGG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55638848 2143 + 59248254 T a score=142194.000000 s hg38.chr19_GL949753v2_alt 469680 93 + 796479 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTTTGGCAGGAGAGAGCGTGACCTTG s panTro4.chr19 59661731 93 + 63644993 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGATTCTGGCAGGAGAGAATGTGACCTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614746 93 + 60714840 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAAGGTGACCTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 380 93 - 21488 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCATGCAGGAGAGAATGTGACCTTG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60526722 93 + 64156825 --AAACTGCCTCTTCTCCTTCCAGGTGTATATGAGAACCCTTCTCTCTCAGCCCAGCCGGGCCCCACAGTGCAGGCAGGACAGAACGTGACCTTG i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47394694 93 + 50890351 --AAACTGCCTCTTCTCCTTCCAGGTCTATATAGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCGCGCAGGAGAGAACGTGACCTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772358 95 + 49145316 AAAATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTA i calJac3.chr22 I 625 C 0 e canFam3.chr1 102958238 202 + 122678785 T e papAnu2.chr19 47714091 1510 + 51301725 M e macFas5.chr19 55638848 2143 + 59248254 T a score=479154.000000 s hg38.chr19_GL949753v2_alt 469773 268 + 796479 TCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACGTAGGTTCTCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGAACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAACCCCATATCTGTCTCATGTCCTAT---------GATCCTAGAGCC s panTro4.chr19 59661824 268 + 63644993 TCCTGCAGCTCCCGGAGATCCTATGACATGTACCGTCTATCCAGGGAGGGGGAGTCTCATGAACGTAGGCTCCCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACCGATGCTTCGGCTATTTCCGTGACTCTCCGTACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAGAGCCCATGCCTGTCCCATGTCCTAT---------GATCCTAGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56614839 268 + 60714840 TCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATTTATCCAGAGAGCAGGGGGGCCGTGAATGTAGGCTCCCTGCAGTGTCCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCTGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAACCCCATATCTGTCTCATGTCCTAT---------GATCCTAAAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 473 268 - 21488 TCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCTGCAGTGCTCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGAAAACACCCTGCTTGTCCCATGTCTTGT---------GATCCTAGAGCC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60526815 268 + 64156825 TCCTGCACCTCCCAGACCTCGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCAATGAACTTAGGCTCCCTGCAGTGTCAAGTGTCAATGGAACTTTCCAGGCCAACTTCCTTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTACCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGTCCGTTTCCGTTACAGGTGAGGAAAGCCCATGTCTGTCCCATGTCTTAT---------GACCCTAGAGcc i rheMac3.chr19 C 0 I 333 s papAnu2.chr19 47715601 261 + 51301725 TCCTGCAGCTCCCAGAGCTCATTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGCAGTGCCCAGTGTCCATGGAATGTTCCAGGCCGACTTCCCTCTGGG-------A------CCCATGGAGGGACCTACAGATGCTTTGACTCTTTCCGTGCCCCATCCTTCGAGTGGTCAGACCTGAGTGACCCACTGCCCGTTTCTGTCACAGCTGAGGAAAGCCTATGCCTGTCCCATGTCTTAT---------GACCCTAGAGCC i papAnu2.chr19 M 1510 C 0 s chlSab2.chr6 47394787 261 + 50890351 TCCTGCAGTTCCCAGAGCTCATTTGACATGTACCATCTGTCCAGGGAGGGGGAGACCCGTGAACTTAGGCTCCTTGCAGTGCCCAGTGTCCATGGAACGTTCCAGGCCAACTTCCCTCTGGG-------A------CCCATGGAGGGACCTACAGATGCTTCAGCTCTTTCTGTGCCCCACCCTTCAAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTTTCACAGCTGAGGAAACGCCATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772453 281 + 49145316 TTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAG--CCCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55638848 2143 + 59248254 T a score=366664.000000 s hg38.chr19_GL949753v2_alt 470041 285 + 796479 TTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGATGC--AGAGAGAAGACGA--AGCTTGGGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGAAGGCCCGCGGCCAGGGCTCCAGGCACACAGGCAGATGGAGAAAACGGTCAGGAGAGACCCAG--AGG-A-GAGAGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACA-TTATCCA-TTTCCCAGAAGCCCATCCTG s panTro4.chr19 59662092 285 + 63644993 TTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGGATGAACAGATGC--AGAGAGAAGACGA--AGCTTGGGTGTGAGGGAGACATCAGGGCACAGGATGGCAGACAGGGCAGCTCCAAACCCTCCTACACGGACTGCATGGAGGCCTGCGGCCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGTGGTCAGAAGAGACCCAG--AGG-A-GGGAGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGAAGCCCATCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615107 286 + 60714840 TTAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGGAGCATGGACAGATGC--AGAGAGAACACGC--AGCTTGGGTGTGAGGGCGGGGTTAGGGCGCAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGATACCCAG--AGACG-GGGAGACTGGGCTCAGTTTGGGAGGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGAAGCCCATCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 741 288 - 21488 ATAACTGAGGAGCTTCCTGCTGA------------------------TGGTGGAGAGAAGGATGGACAGATGCCGAGAGAGAAGACAA--AGCCTGGGTGTAAGGGCGGGGTCAGGGCACGGGATGGCAGACAGGACACCTCCAAACCCTCCTGTACGGCCTGCATGGATGCCTGCAGTCAGGGTTCCAGGCACCCAGGCAGATGGAGAAAGCAGTCAGGATAGACCCAG--AGA-A-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACTGTTACCCA-TTTCACAGAAGCCCATCCTG i nomLeu3.chr10_GL398297_2_random C 0 I 15579 s papAnu2.chr19 47715862 286 + 51301725 ATAGCTGGGGAGCTTCCTGCTGG------------------------TGATGGAGAGAAGCATGGACAGATGC--AGAGAGAAGACGA--AGCCTGGGTGTGAGGGGGGAATGAGGGCACAGCATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGCGTGGTGGTCCGCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAG--AGG-AGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGaagcccaccctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395048 285 + 50890351 ATAGCTGAGGAGCTTCCTGCTGA------------------------TGATGGAGAGAAGCATGGACAGGTTC--AGAGAGAAGACCA--AGCCTCAGTGTGAGGGTGGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCGGCGTGGTGGTCCACGGTCAGGGCTCGAGGCACCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAG--AGG-A-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACC-TTACCCA-TTTCCCAGAAGCCCTTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772734 273 + 49145316 ATACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATAC--AGACAG-GGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC----------CTCC-----------TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGA-G-GTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCC-TTTTCCATTTTCTCCGAAGCCCCTCCTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=37080.000000 s hg38.chr19_GL949753v2_alt 470326 24 + 796479 GCCTCTCACCCACACAGGGATGTC s panTro4.chr19 59662377 24 + 63644993 GCCTCTCACCCACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615393 24 + 60714840 GACTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16608 24 - 21488 GCCTCTCACCCACACGGAGATGTC i nomLeu3.chr10_GL398297_2_random I 15579 C 0 s papAnu2.chr19 47716148 24 + 51301725 gcctctcacCCACAGAGAGATGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395333 24 + 50890351 GCCTCTCACCCACAGAGAGATGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45773007 23 + 49145316 ACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 C 0 T 3003 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=470106.000000 s hg38.chr19_GL949753v2_alt 470350 432 + 796479 ATCACCAGCAACCCCTA-CACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGCTTACCACCTTTAACA---ttttttttttttttgaggcagagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaatttccgcctcctgggttcaagcgattctcttgcctcagccacctgagtagctggtgctacaggcgcgcaccaccacgccaggctactttttgtatttttagtagagaggtggtttcaccatgttggtcgagctggtctccaactcctgaccacgtgatccacccgcatgtgcctcccaaagtgctgggattacaggcatgagccaccacgcccagccAcatttaccatttttaagtgtaaagtctagtggtcataa----atacatt------------tata s panTro4.chr19 59662401 439 + 63644993 ATCACCAGCAACCCCTA-CACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATATAGTTTACCACCTTTAACA--------tttttttttgaggcagagtcta--gctctgtcccctatgctgtagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtcctacaggcgcgcatcaccacgccaggctactttttgtattttcagtagagaggtggtttcaccatgttggtggagctggtctcaaactcctgaccacgtgatccacccacatcagcctcccaaagtgctgggattacaggcatgagacaccgcgcccggccACGTTTACCATTTTTAAGTGTAAAGTCTAGTGGTCATAA----ATACATTTTtatatgtatatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615417 442 + 60714840 ATCACCAGCAACCCCTA-CACCCTTTTCTTTTTGCTTGAAAAAATAtttattgaggtgaaatatacctatatagcttaccatctttaaca------tttttttttttttggcggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccgcctgagtagctggtactataggcacgcaccaccacgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgatccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggTCataa----atacatttatatatatatatgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16632 435 - 21488 ATCACCAGCAACCCTTA-CACCCTTTTCTTTTTGTTTGAAAAAATAtttattgtgattaaatatacctatatagcttaccacctttaaca--------tttttttttgaggtggagtcta--gctctgtcccctacgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtaccacaggtgcacaccaccatgccagcttactttct-tatttttagtaggggg--ggtttcaccctgttgttcaagctggtctcgaactcctgaccaggtgatccaccca------cctcccaaagtgctgggattataggcatgagccaacgcgcccggccacgtttaccatttttaagtgtaaagcctagtggtcataaatacatacatttgtttgtttgtttgtt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716172 428 + 51301725 ATCACTAGCAACCCCTAGGACCGTTTCCTCtttgtttgaaaaattatttattgaggtTTAATACACCTATATAGTTTaccacttttaaca---------ttttttttgaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataa----atacatttata------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395357 439 + 50890351 ATCACCAGCAACCCCTAGGGCCATTTTCTCTTTGTTTGAAAAAttatttattgaggttaaatatacctatatagtttaccacttttaacatttttttttttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataa----atacatttata------------ i chlSab2.chr6 C 0 I 64 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=-5678.000000 s hg38.chr19_GL949753v2_alt 470782 19 + 796479 ----------------------------------tATATATAttttttttttt------------------------------------ s panTro4.chr19 59662840 19 + 63644993 ----------------------------------tatatatatTTTTTTtttt------------------------------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615859 12 + 60714840 ----------------------------------tatatata-------tatT------------------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17067 19 - 21488 ----------------------------------tgtttgtttgtttgtttgt------------------------------------ i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716600 89 + 51301725 tatttatgtgtgtgtgtgtgtatacatatatgtgtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatatatat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47395796 64 + 50890351 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=129054.000000 s hg38.chr19_GL949753v2_alt 470801 107 + 796479 tttttttAccctccacccttttcttcctggcctctggaagccatcattctactctctaccttcatgagatccaccttttagct-ctgtatatgggtgagaaatgggaa s panTro4.chr19 59662859 108 + 63644993 tttttttaccctcttcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccacattttatctcctgtatatgggtgagaaatgggaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615871 108 + 60714840 TTTTTTTAccccccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17086 108 - 21488 ttgtttTAccctccacccttttctccctggcctctggtagccaccattctactctctcctttcatgagatccaccttttagctcttgtgtatgggtgagaaatgggaa i nomLeu3.chr10_GL398297_2_random C 0 T 15772 s papAnu2.chr19 47716689 107 + 51301725 ttttttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395860 108 + 50890351 tTTTTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaa i chlSab2.chr6 I 64 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=10290.000000 s hg38.chr19_GL949753v2_alt 470908 12 + 796479 tctttgtaatga s panTro4.chr19 59662967 12 + 63644993 tctttgtaatga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615979 12 + 60714840 tctttgtaatga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716796 12 + 51301725 TCTTTGTAATGa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395968 12 + 50890351 tgtttgtaatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17194 15772 - 21488 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=709692.000000 s hg38.chr19_GL949753v2_alt 470920 607 + 796479 cttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacattctctctatccattcatccactgatgggca-ggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtcatcttggctcattgcaacctctgcctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttgttttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgagatgcccgcctcagtctcccaaagtgccgggattacaggcctgatccaccacacccaacctctttttagttctttaaaggacttccatacttt s panTro4.chr19 59662979 607 + 63644993 cctccagttccatccatgtggctgcaaatgacaggatgttattctttctgtggatgagtagtctccactgagtgtatgtaccacattctctctatccattcatccactgatgggca-ggtaggttgactccacatcttggctactgtgaagagtgctgcaccaatcatacgagtgtagatatcacatcgatatattcatttattttcctttggacatcaacccagtagtgaaattcctggatactatgaaagttctctttttagttttttgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaatctccgcctcctgggttcagatgattttcctgcctcagcctccgtagtagctgggatcacaggtgcatgccaccatgcctggctactttttgttttttttagtatacatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggagcccgcctcaggctcgcaaagtgctgggattacaggcatgatccactgcacccaagctatttttagttctttcaaggactcgcatacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56615991 594 + 60714840 cttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctattcgttcatccactgatgggcagggtaggttgactccacatctcggctactgtgaacagtgctgcaccgatcatacgagtgcagatatcacttcgatata-tgatttcctttcc-ttggatataaacccagtagtgaaattgctggatactatgaa------------agtttttcgtttgttgtttttgttttagtttttgagacactttctctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccctagtagcagggattacaggtgcacgcccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 1422 606 - 21488 cctccagttccatccatgtgggtgcaaatgacagggtgttattgtttctatggatgagtagtctccactgtgtg--tgtactacattctctctatccattcacccactgacgggca-ggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatacgagtgcagatatcacttcgatatattgatttcctttccttcggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtgcaagtgatgtgatcttggcccattgcaacctccgcctcctgggttcagacgattttcctgcctcaccctccccagaagcaggcattacaggtgcaagccaccatgcttggctactttttatattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcctgcctcggtctcgcaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatgcttt i nomLeu3.chr10_GL398297_2_random T 15772 C 0 s papAnu2.chr19 47716808 607 + 51301725 gctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCA-GGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgagacagtttccctctgtgcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395980 600 + 50890351 gctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggca-ggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgccttggtttttgagaccgtttccctctgtgcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 C 0 I 42340 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=278389.000000 s hg38.chr19_GL949753v2_alt 471527 339 + 796479 tctccgtaatcgctgtactaatttacactcctcccaacagggtaccagggttctcctttctctaccaccttgccagcatttcttttgcctgtcttgcagctaaaagcc--------attttattttatttcat---------------------------------tttattttgagatggagttttgctcttctcacccaggcaggagtgcagtggcgctatctcggctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctccc--gagta-gctggaattacaggcacactccaccacgcccgactaatt---tttgtatttttagtagagacagtgtttctctatgtgggtcagactggtctcaaa s panTro4.chr19 59663586 363 + 63644993 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctaccaccttgcctgcatttcttttgcctgtcttgcagctaaaagcc--------attttattttatttcat--------tttattttattttattttatttta-tttattttgagatggagtttcgctcttctcacccaggctggagtgaaatgacgtgatctcggctcaccgcaacctgcacctcccaggttcaagcgattgtcctgcctcagcctcct--gagta-gctgggattacaggcacacgccaccacgcccggataatt---tttgtgtttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56616585 370 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcattactttggcctgtcttgcagctaaaagcc--------attttattttattttat--------tttattttattttattttattttattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcacgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgcctcagcctccctgaaataggctgggattacaggcacatgcaaccacgcccggcctatttaattggtatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaa i ponAbe2.chr19 C 0 T 34455 s nomLeu3.chr10_GL398297_2_random 2028 380 - 21488 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctaccaccttgccagcatttgttttccctgtcttgcagctaaaagcctttattttattttattttattttattattttattttattttattttattttattttattttattttgagatggagttttgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccatctcccaggttcaagtgattctcctgccttagcctccc--aagta-gctggaattacaggcacaggccaccacgcgcggctaatt---tttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717415 363 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagcc--------attttattttattttat--------tttattttattttattttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctccc--aaata-gctggaattacaggaatgtgccaccacgcccagcttatt---tttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=144450.000000 s hg38.chr19_GL949753v2_alt 471866 179 + 796479 ctcctgaccttatgagattcacccacctcaggctctcaaagttctaggatgacagacgtgagccaccacgcccggcctaaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgatactgagcactttttagtatgtggggaaat s panTro4.chr19 59663949 179 + 63644993 ctcccgacctcaggagattcgcccacctcgggctctcaaagttctaggatgacagatgtgagccaccacacctggcctaaaagccattttaatgggatgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatagtgaccactttttcatatgcggggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582500 178 + 60714840 -ctctgaccttaggagattcgcccacctcgggctctcaaagttctaggatgatagaggtgagccaccacgcccggcctaaaagccatcttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctaatgatgaatgatactgagcattttttcatatgtggggaaat i ponAbe2.chr19 T 34455 C 0 s nomLeu3.chr10_GL398297_2_random 2408 178 - 21488 ctcccgacctcaggagatttgcccacctc-ggctctcaaagatctaggatgacagatgtgagccaccacgcccggcctaaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatactgagcactttttcatatgcagggaaat i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717778 179 + 51301725 ctcccgacctcaggtgattcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcctaaaagccattttaatgggGTGAGATGACAACTCactttgattttaatttgcatttttctaatgataagtgatactgagcactttttcatatgcggGGAAAT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=43765.000000 s hg38.chr19_GL949753v2_alt 472045 38 + 796479 ttcatgtcttctgctcctttttcaattaaatcatttgt s panTro4.chr19 59664128 38 + 63644993 ttcatgtcttttgctcctttttcaattaaatcatttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582678 38 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2586 38 - 21488 ttcatgtcttttgctcctttttcaattaaatcatttgt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47717957 37 + 51301725 TTCAGGTCTTCTGCTC-CTTTTTAATTAAATCATTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438920 38 + 50890351 ttcatgtcttttgctcattttttagttaaattctttgt i chlSab2.chr6 I 42340 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60527083 333 + 64156825 I a score=64518.000000 s hg38.chr19_GL949753v2_alt 472083 40 + 796479 tttattgagttgtttgagcttcttatatttctagttatta s panTro4.chr19 59664166 40 + 63644993 tttattgagttgtttgagcttcttatatttctagtcatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56582716 37 + 60714840 tttattgagttgtttgag---cttatatttctagtcatta i ponAbe2.chr19 C 0 I 34829 s nomLeu3.chr10_GL398297_2_random 2624 40 - 21488 tttattgagttctttgagcttcttatatttctagttatta i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60527416 40 + 64156825 tttattgagttatgtgatcttcttatatttctagttatta i rheMac3.chr19 I 333 C 0 s papAnu2.chr19 47717994 40 + 51301725 TTTATTGAGTTGTTTAAGCTTCTTATATTTCTAGTTATTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438958 40 + 50890351 tttattgagttatgtgagcttcttatatttctagttataa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=431073.000000 s hg38.chr19_GL949753v2_alt 472123 268 + 796479 atcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttta-tttttagcagtgcagaagttgcttagtttgaggtaatcccaatggtcta-tttttgcttcgattacttgtgttttcaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttgttctacgtgtttcataggttcaggccttagactcacatctttaatccattttcatttg s panTro4.chr19 59664206 269 + 63644993 atcccatctcagatgcatagtttgcacattgttgctcccagtctgtgggttgtctcttcactttgttggttta-tctttagtggtgcagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcgtggagcatttccccaatattttcttctacgtgtttcataggttcaggccttagactcacatctttaatccattttcattcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617582 269 + 60714840 atcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgcgttgtttcttcacgttgttggttta-tctttagtggcacagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatctttaatccattttcatttg i ponAbe2.chr19 I 34829 C 0 s nomLeu3.chr10_GL398297_2_random 2664 269 - 21488 atcttgtctcagatgcatagtttgcatgtatttgctcccaatctgtgggttgtctcttcactttgttggttta-tctttagcagtgcagaagttgcttagtttgatgtaaccccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacatgtctcataggttcaggccttagactcacatctttaatccattttcatttg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60527456 270 + 64156825 atcctgtctcagatgcatagtctgcaaatattggctcccattctgtgggttgtctcttcactttgttgtttgcttgttttgcagtacagaagctgcttagtttgatgtaatcccaatggtctgtttattgctttgattatttgtgtttttgaggtttcaaacaaaatgtctcttctcagacaaaggtcctgaagcacttcctcaatattttcttctacgtgtttcataggttcaggccttagactcatgtatttattccattttgatttg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47718034 268 + 51301725 ATCCTgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggttaA-TGTTTAGTGGTGCAGAAGCTgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgtttttaaggttttaaacAAAATGTCTTTCCTCGGACAAATGTCCTGGAGCATTTCCCCAAGACTTTCTTCTACGTGTTTCATAGGTTCA-GCCTTAAACTCgcatctttaatccattttcatttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47438998 270 + 50890351 atcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgtatttaatccatttggatttg i chlSab2.chr6 C 0 T 42370 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=551895.000000 s hg38.chr19_GL949753v2_alt 472391 335 + 796479 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcctctgcatgtcgatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggc----tgggcttggtggctgacacctgcaatttcagcactttgggaggccgaggcgggtggattacctgaggccaggagttcaagatcagtctggacgacgtgatgaaacatcgtctccactaaaaatataaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaa-t- s panTro4.chr19 59664475 336 + 63644993 a-tttttgtgtttggtgacaggtagaggtgcagtttcattcttctgcatgtagatatccagttttccctgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggc----tgggcattgtggcccacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctgaccaacatggtgaaacattgtctgtactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggtgagagaatt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56617851 335 + 60714840 a-tttttgtgtatggtgacaggtagaggtgcagtttcattcttctgcatgtagatgtccaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggc----tgggcatggtggctaacacctgcaattgcagcattttgggagaccgaggcaggtggatcacttgaggccaggagttcaagatcagcctggccaacatggtgaaacgttgtctctactaaaaatacaaaagttagctgagcatggtggtcagcacctgtaataccactactcaagggtttgaggtgagagaa-t- i ponAbe2.chr19 C 0 I 4517 s nomLeu3.chr10_GL398297_2_random 2933 336 - 21488 attttttgtgtatggtgacaggtagaggtgcagtttcattcctatgcatgtagatatccagttttccccgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggc----tgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcgggagtttgaggcgagagaa-t- i nomLeu3.chr10_GL398297_2_random C 0 I 1 s rheMac3.chr19 60527726 340 + 64156825 g-tttttgtggatgatgagacgtagagctgcagtttcattcctctgcatggagataaccagttttccccacattgtttattgaaaagactgtcctttcctgattgtagcctcctggcacctttgtcaaaatgcattggattggcagagcgggcatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtagatcacctgagacgaggagtttgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagcttagcattgtggtcagtgcctgtaataccactactcaagactctgaggcaaaagaa-tt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47718302 336 + 51301725 a-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcaCGGTTTACTAAAAAGTCTGTCCTTTCCTGATTGTaagttcttggcacctttgtcaaagtCCATcggatgggc----tgggcatggtggttcacacctgcaattccagcactttgggaggccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctgtactaagaatacaaaaattagctgagcatggtggtcaGCGCCTGTAATACCactactcaggagtttgaggcaaaagaa-tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47396898 336 + 50890351 a-tttttgtgtatggtgagaggtagaggtgcagtttcattcctctgcatgtagatatccagttttccctgcacagtttattaaaaagtctgtcctttcctgattgtaagttcttggcacctttgtcaaagtccatcagatggac----tgggcatggtggttcacacctgcaattccagcactttgggaggctgaggcaggtggatcacctgaggcctggagttcaagatcagcctggccatcatggtgaaacatcgtctgtactaaaaatacaaaaattagctgagcatggtggtcggcgcctgtaataccactactcaggagtttgaggcaaaagaa-tt i chlSab2.chr6 T 42370 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=2119098.000000 s hg38.chr19_GL949753v2_alt 472726 1262 + 796479 gattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgcactccagcctgagtgacagagcaagactccatctcaaaaga----aaaaataaaaaaccattggatgtaaatgcatggaatatatctgtgttattcattctgctccgttgttctatgtccctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATAAAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCATCCTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCGTTGACTCAGCATCTCACAGCTCTGACATTGTACCCCTGTCTTCCACCA--TCTCCGAACTCCAGATACTCCTACAGCGAAAGGGATCTGGGTCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACTTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGAGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTATAGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGAAAGAGCCTTGCTGTAACAGAGAACAGAGCTCA---------TGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCACTGTGGAAGCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttttttaattatcttacagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaggattccaggcaagaatctgcttctcacttttctcagcttctagaggctcccacattccttcgctcctggtccccttcctccttcctcaaa s panTro4.chr19 59664811 1261 + 63644993 gattgaacccaggaggctgaggttgcagtgaaccaagattgcacctctgcactccagcctgggtgacagaacaggaatccatctcaagaga----aaaaataaaaaaacattggatgtaaatgcatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttccttatgccaacatcatgctgttttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgtttactctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATATAAAAATTATGGAAAAAAGGATCCCTGGACTCCCAGGGCACAATATCAGATTACAGAGTGTTGGCCATGAACCAACCTCAAAAATTTCCATTGAATAGAGGACAGACACTCACATTTCCTCACCTGTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAATCAAGCTCCAAAACCAGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGAGTCAGCATCTCACAGCTCTGACATTGGGCGCCTGTCTTCCACCA--TCTCCGAACTCCAGATACTTCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATCGCCAATCTGACATCTTTCTCAGG-AAAAATGCAATGTTTCTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCCGATGAGGGCGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCACGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACAGAGAACAGAGCTCA---------CGCATGCACACTTTGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggttatttaattatcttacagtgctctagctcaaagtacgaagtgcatgtcactgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgcttctcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56622703 1263 + 60714840 gattgaacccaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagtgagactccatctgaaaaga----aaaaataaaaaaCCAttggatgttaatgcatggattatatctgttttcttcattctgctccattgttctatgtgcctttctttatgccaacgtcgtgctgttttgcttactacagctctagaatgtatttttagatcaggtagtgtgatgctcctgttttctctttataccttgaagtctcaagaCAGTGGGTGTCACATATAAAAATTATGGGAAAAAGGATCCCAGGACTCCCAGAGCCCAATATCAGATAACAGAGTGTTGGCCATGAACCTACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTTGTGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACGGAACCAAGCTCCAAAATCGGTGAGTACAGAA-CCCTCTTATATCTGCCTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGACTCAGCATCTCACAGCTCTGACATTGTGCACCTGTCTTCCACCA--TCTCCAAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAACTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGACAAAAATGCAATATTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTTTAGAGAAGTGCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCCGAAGAGAAAGAGCCTTGCCGTAACAGAGAACAGAGCTCA---------TGCACGCACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggttttttaattatctaaaagtgctgtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggcggccttccctctgaaggttccaggcaagaatctgcatctcacttgtcccagcttctaaaggctcccatgttccttggctcccggtccccttcctccttcctcaaa i ponAbe2.chr19 I 4517 C 0 s nomLeu3.chr10_GL398297_2_random 3270 1263 - 21488 gattgaacccaggaggctgagtttacagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactctatctcaaaaga----aaaaataaaaaaccattagatgtaaatgcgtggattatatctgtgttattcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACATATAAAAACTATGGAAAAAAGGATCCCAGGACTCCCCAGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACTCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACCCTTCAAACAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATGCAGGCGTTGACTCAGCATCCCACAGCTCTGACATCGTGTGCCTGTCTTCAACCA--TCTCTGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAAATGCAGTGTTTGTTCTGCCTTCATTCCAAACTGGAGGATAAATTCCTGAGGGCTTGAGAGAGGGAAGAGAAGGGAACATCTGACGAGGGAGAGGTGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACACAGAACAGAGCTCA---------TGCACGTACACTTCGACTCACTGACTCATTCGGCCGCGGCCCCATGTTCAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcatgggtgaaaacaaaacagttatttaattatcttacagtggggtagctcaaagtatgaagtgcatctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgcttctcacttgtcccagcttctaaaggctcccatgttccttggctcctggtcccattcctccttcctcaaa i nomLeu3.chr10_GL398297_2_random I 1 C 0 s rheMac3.chr19 60528066 1253 + 64156825 gcttgaacccagtagacagaggttgttg-gaaccgagactgcacctctgcaatccagcctgagtaacagagcaagattccatctca---------aaaaaaagaatgccattgaatgtagatgcatgga-tatatctgtattctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgagatgttcctgttttCTCTCTGTACCATAAACTCTCAAGACAATGGGAAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGT-TTCTATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctctgac--tgtgggcctgtcttccaccatctctctgaactccagacactccaaaagcaaaagggatcttggcccagcacagggctccgtgaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAGG-AAAAATGCAGTGTTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGCCAAGGTGTTTTAGAGAAGATCCACTTGCCAAAGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTG-AGTAACAGAGAACAGAGCTCATGCACACCTTGCACGCACACTTCGACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCCGTGCAGT-TAGAATCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacggctttttaattatcttacagtgctgtagctcaaaggatgaaatgcacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgct---------tcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaa i rheMac3.chr19 C 0 I 4 s papAnu2.chr19 47718638 1261 + 51301725 gattgaacctaggaggctgaggttgcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagattccatctcaaaagag--gaaaaaaaaaaaaccattggaTGTAAATGCATGGATTATATCTGTGTTCTTCATTCTGctccattgttctatgtgcctTTCTTTATGccaatgccatgctgttttgcttactacaGCTCTGTAACATATTTTTAGATCAGGTAGAGTGAcgctcctgttttctttttatacctTGAACTCTCAAGACAGTGGGCATCACATACAAACATTATGGAGAAAAAGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTGTTGGCCATGAACCAACCTCAAATATTTCCATTGAGTAGAGGACAGGCAGCCtcatttcctcacctctctccttTCTTGTGTTCTAGGGAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGATGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAGCTCTGACATTGTGCGCCTGTCTTCCACCA--TCTCTGAACTCCAGACACTCCAACAGTGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTTATGGAGATGAGACCTCCTACAAGCTAGAAGAATGACTGCCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGCTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTtgacagagggaagggaagggaacatcTGATGAGGGCGAGGGGTTTTAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGAAAAACCCTTG-AATAACAGAGAACAGAGCTCA---------TGCACGCACACTTCAACTCACTGACTCATTCAGCCATGGCCCCATGCTCAGGCTGTGCAGT-TGGAATCCTTTCCTACTGTTGCCATAACAAATTTCCACAAGATTCGTGGGTGAAAACAAAACGGTTTTTTAATTATCTTACAGTGCTGTAGCTCAAAGGATGAAATGCATCTTACTCGGCTAAAATC-AGGTGACAGCAAGCCTGCCTTCCTTCTGAAGGTTCCAGGCAAGAATTTGCTTCTCACTTGTCCCAGCTTCTAAAGGctcccacattccttggctcctggtgcccttcctccttcctcaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47397234 1263 + 50890351 gattgaacccaggaggctgaggttgcagtgaactgagattgcacctctgtactccagcccgggtgacagagcgagattctatctcaaaagagaaaaaaaaaaaaaaaccattggatgtaaatgtatggattatatctgtgttcttcattctgctccgttgttctatgtgcctttctttatgccaatgccatgctgttttgcttactatagctctgtaacatatttttagatcaggtagagtgacgctcctgtgttctttttATACCTTGAACTCTCAAGACAGTGGGCGTCACATACAATCATTATGGAGAAAAGGATCCCAGGATTCCCAGGGCCCAATATTAAATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACATGTAGCCTCATTTCCTCACCTCTCTCCTTTCTCGTGTTCTAGGAAACCCTTCAAATGGTTGGCCTTCACCCACTGAACCAAGTTCCAAAACTGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGGAACCTGGGGAGTTGGAAGCCTTGGATTCAGGCGTTGACTCAGCATCTCGCAACTCTGACATTGTGCGCCTGTCTTCCACTA--TCTCCGAACTGCAGATACTCCAACAGTGAAAGGGATCTGGGCCCAACACAGGGCTCAGTTAAATCTCTTAATCTCTAGTTTTATGGAGATGAGCCCTCCTACAAGTTAGAAGAATGACTACCAATCTGACATCCTTCTCAGG-AAAAATGCAGTGCTTGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCT-GGGGCTTGACAGAGGGAAGGGAAGGGAACATCTGATGAGGGCAAGGGGTTTTAGAGAAGCTCCACTTGTCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCAGTAACAGAGAACAGAGCTCA---------TGCATGCACACTTCAACTCACTGACTCATTCAGTCATGGCCCCATGCTCAGGCTCTGCAGT-TGGAATCCtttcctactgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggttttttaactatcttacagtgctgtagctcaaagaatgaaatgcatctcactgggccaaaatc-aggtgacagcaaggctgccttccttctgaaggttccaggcaagaatttgcttctcacttgtcccagcttctaaaggctcccacattccttggctcctggtgcccttcctccttcctcaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=1030114.000000 s hg38.chr19_GL949753v2_alt 473988 822 + 796479 gcccacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgctctcccttcttcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccataattccatctgcaatcttcattcctcctttccatgtaaaataagatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTTGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGTATGAAATCTAttt----gtttgtttcttcatttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcaccatcttggctcactgcaacctgcaccttctggatccaagtgattctcctgcgtcagcctctcaagtagctgggattacaggcaactgccaccatgcccggctaattctttttgtatattttttgt--agaggatgtttcaccatcttcgccaagcttctctgaaactcccaacctcaagtgatccgaccgtctcagcatcctaaagtactgggataactggcgtgagccactgtgcccagccAGAATTTAAAATAAATAATACATAATGCTGAGTGTATGATTTTGGGTGACAGAG s panTro4.chr19 59666072 822 + 63644993 gcccacaaaggctggtcacatctcacatggcatcactcagacacttcctccttaccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccatcataatctcccggaaatcatccaggatactcttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctccttccc-tgtaaaataacatattcacaagctatggaggctaggacagggacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAGTGAATGATCCACTGGGAAGCATCTGTGCATGAAATCTAttt-----tttgtttgttcgtttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacaatcttggctcactgcaacctgtgtctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcccggctaattctttttgtatattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccacctcagcatcccaaagtactgggattacaggcgtcagccactgcgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56623966 820 + 60714840 acccacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccacacctctttctctgaatgctgcttacccttcttcctcatcttttgaaaacttggggattctatcgggttcaccaagatgaaaatccaccataatctcccggaaatcatccaggataccctggttttaacttcagctgattagcaaccataattccatctgcaatcttcattcctactttccatgtaaaataacatattcacaagctatggaggctaggacaggaacattttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTGAAATGGGAGGGCAGAAAATGAACGCACAAGTGGACCAATAAATGAATGATCCATTTGGAAGCGTCTGTGCATGAAATCTAttt----gtttgtttc----tttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaactgccaccacgcccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagttatccaaccgtctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 4533 828 - 21488 acccacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccacacctctttctcggaatgctgctctcccttcctcctcatcttttgaaaacttggggattctattgggttcaccaagatgaaaatccaccacaatctcccggaaatcatccaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaaataacatattcacaagctatggaggttaggacagggacattttggggtgggacagccttctcctgccttccgcaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGGCCAATAAATGAATGATCCATTGGGAAGCATCTGTGCACGAAATCTAtttgtttgtttgtttgtttgtttgtttAttgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcaccctcttgagtagctgggattacaggcaactgccaccacgcccggctaattctttttgtacattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaaatgatccaaccatctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATAAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAG i nomLeu3.chr10_GL398297_2_random C 0 I 15601 s papAnu2.chr19 47719899 814 + 51301725 ACCCACAAAGACTggtcacatctcacatggcatTACTCAGACCCTTCTTCCTTACCACACTTCTTTCTCTGAATGCTGCTCtcccttcttcttcatttttggaaAACTCGGGGATTCTATTGGGTTCACCAAGATGAAAATCCATCATAATGTCCCTGAAATCATCCAGGATACCCTTGTCTTAAgttcagctgattagcaaccgtAATTCTGTCTGCAATCGTCATTCCTCCTTTCCGTGTAAAATAACGTATTCACAAGCTATGGAGGCTAGGACAGGGACATTTTGGAGTGggacagcattctcctgccttccaTAAACAGGAAACAAGATGCATTTGGCCTCTACTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCA------GAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCAAGAAATCTATTT----GCTTGTTCG----TTTGTTTAtcaagacggagtctccctctgtcttccaggctacagtgcagtggcacgatctctgctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagctgggattacaggcaaccactaccacgcccggctaattctttttgtatattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccagcctcaagtgatctgaccgtctcaggctcccaaagtactgggattgcaggtgtgagccactgtgcccagccagaatttaaaataaataatggataATGCTGAGTGTATAATTTTGGGTGACAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47398497 818 + 50890351 actcacaaagactggtcacatctcacatggcatcactcagacccttcttccttaccagacttctttccgtgaatgctgctcttccttcttcttcatctttggaaaacttgggaattctattgggttcaccaagatgaaaatccatcataatctccctgaaatcatccaggatacccttgtcttaagttcagctgattagcaaccgtaattctgtctgcaatcgtcattcctcctttccgtgtaaaataacgtattcacaagctatggaggctaggacagggacattttggagtgggacagcattctcctgccttccataAACAGGAAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTCAAATGGGAGGGCAGAAAATGAAGGCACAAGTGGACCAATAAATGAATGATCCATTGGAAAGCATCTGTGCAAGAAATCTATTT----GCTTGTTCG----tttgtttatcgagacggagtctccctctgtcttccaggctacagtgcagtggcaagatctcggctcactgcaacctgtgcctcctggattcaagtgattctcctgcctcagcctctcgagtagatgggattacaggcaaccactaccacacccggctaattctgtttgcatattttttgtagagaggatgttttaccatgttggccaagcttgtctgaaactcccaacctcaagtgatctgaccgtctcagcctcccaaagtactgggattacaggtgtgagccactgtgcccagccAGAATTTAAAATAAATAATAGATAATGCTGAGTATATAATTTTGGGTGACAG-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60529319 4 + 64156825 I a score=177164.000000 s hg38.chr19_GL949753v2_alt 474810 151 + 796479 AAGATCTCACTAATCAGATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGAAGGCAGAAAGCTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTGC-CTCA s panTro4.chr19 59666894 151 + 63644993 aaggtctcactaaacagatatttgtgacattaatgaaaaacacggattgaacccctggaagattggcagaaggattttccacacacagctgtcagccgtgaaggcacaaaggtgaaaacaatctgatgtggaaggaagaggctctgc-ctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56624786 152 + 60714840 AAGGTCTCACTAATCAGATATTTATGACATTAATCAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGCATTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20962 149 - 21488 AGGGTCTCACTAATCACATATTTGTGATGTTAATGAAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTC--CACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGA i nomLeu3.chr10_GL398297_2_random I 15601 T 15750 s papAnu2.chr19 47720713 151 + 51301725 AAGGTCTCACTAATCGGATATTTGtgacattaatgaaaaaaatggatTGAATCCCTGAAAGACTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47399315 150 + 50890351 -AGGTCTCTCTAATCGGATATTTGTGACATTAATGAAAAAAATGGATTGAATCCCTGAAAGACTGGCAGAAGGATTTTCCACACACAGCTGTCAGCCTTGAAGGCACAAAGGTGAAAACAATCTTATGTGGAAGGAAGAGGCCCTGC-CTGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60529319 4 + 64156825 I a score=2811343.000000 s hg38.chr19_GL949753v2_alt 474961 2373 + 796479 AATGCTGGGAATGAGGTGGGGAGAATGACAAGACGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGCAACAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGGTAGCCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAACTGGGTGAAGCAGATGGATATAAGCTATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCTGGGTATGATTTTCCTAGTTGTCTAATCCTCGC----TTAATTTCTTTCTGAGCTTTATTCCTACTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggatcacatgaagtcagcagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaacacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAAATATAATATAACACATGCAAATGAGAAAGGGACCTGAATTCCAATCATGATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATACACAAAGTGCTCTGTTCATCACAAGAAAACA-TGCCCTCTCACCCAAATCCCCCACCTCACCCCTACTTCCA--ATCATCTGTGGAGATTCAGATAGGCCATGGGGAGGTAAATTCTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATTAGCGTCAGCAGTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAACCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCACGTTTCACATGGGCTTCAACACTGTTTCCTGGCCATTTGACATAAGAGAATTCTACTTCGCTTTTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCCGTGGATGTAGAAATCCTAAAGCACAGTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacattacacaggcaggttcattactaacagataagcagcgagtgacaacagaagcctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcaccccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgccttcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggtcgttgctgtcttagtttttttttttg---------------------------ttgctct--------------------------------------------------gaaggaacacttgagcctcggtaacttctaaagaaaagagatcggtttgcctcacagttctgcaggctgtactggaagcatggcaccagaatctatttctcgtgatggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagagagtaagggggagagggagcaatggagcttccaagctctttttaacaaccagctgtccaggaactaacagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctgaagaggcccaacctcccacaatgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataattgagaa s panTro4.chr19 59667045 2369 + 63644993 aatgctgggaatgagatggggagaatgacaagacgactgtggagagacggagagcACACTGGGTACACAGGAAACGAAGGAGGAACAAAGGGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGGTAACCAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGTGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACCCTAAGTGGATGAAGCAGATGGATATAAGCTATGCTTGTGAGGTGGAATCATTGGCTGGAAAGGCTTGCGGGGTATGATTTTCCTAGTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT-ATTATAGCATAGCATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattcgatgaagtcaggagtttcagaccagcctggccaacatggtgaaaccctatctctatgaaaaatacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaagatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggagattgcatcactgcactccagcctgggtgacacaaggagactctgtcctaaaaaataaaaataagaaaTGC------ATAAATATAATAAAACACACATGAATGACAAAGGCGCCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTCATCCGTTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCCTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATCACACAAAAAAA-TGCCCTCTCACCCAAAT-CCCCACCTCACCCCTACTTCCA--ATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGTGCCAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATAGAAGCAATAGATGGCCGAGGAGGTGGTCCTTCCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTGCACACGGGCTTCAACACTATTTCCTGGACGTTCGACATAAGAGAATTCTACTTTGCTTTTTTTAATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGTCTTCCCAGAGAAGACTCTAAACACCTGCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacattacacaggcaggtgcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtccctcaaggctcagaaaagctgctcgggacatatggagtcatcccatttgcagtgtagctgggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttag--tccatttttg---------------------------ttgctct--------------------------------------------------aaaggaacacttgagcctgggtaagttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttatcgtgatggcctcaggctgctcccactctggcagaagggaaagagggtctgtccgtgcagagaccacggagatcacacggcaaccgagggagcaaggaggagggggagcaatggagtttccaagctctttttaacaatcagctctccaggaactaatagagggggaacttgctaaccccgtttccttgaaacagcattgatctgttcatgatggatccacctccatgactcaaacacttcccaagaagcccaccctcccacactgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtggtatcctcagcacgttcgatggttactatgagagctataactgagaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56624938 2352 + 60714840 AATGCTGGGAATGAGTTGGGGAGAATGACGAGATGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCATAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCCTAGTTGTTTAATCCTAGCTTAATTAATTTCTTTCTGAGATTTATTCCTCCTACGCATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagctgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtagagattgcatcactgcactccagcctgggcgacacacggagactctgtctcaaaaaataaaaataagaaaTGC------ATAAATATAATAAAACACACACGAATGACAGAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTacttctttgatcctttatcttatccattaggcaatcaccctaaaacctcttccctatttggttttctgtgagcatgagatcatatagaaaatgtgaaagcccgctgaatcctccagcacagatcctggaacacagaaagtgctcTGTTCATAGCAAAAAAAACTTGCCCCCTCACCCAAATCCCCCACCTCAGCCCTACTTCCA--ATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACGAAGAGTAGCACGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTT-ATCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacataggcaggttcattactaacacataagcagcgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctcgagacatatggagtcacttcatttgcactgtagctgggggaagccaaaaagcagcccagcctgggttttgtacccaggagccacaggaagcactcagctaaaacactgcatgatgtcctcctccagggagaacaggaagacagcccaggctgttctgggacattcctcctgatctcaggatgttgctgtcttag--tccatttttg---------------------------ttgctat--------------------------------------------------aaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcacggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgc--agaccacagagatcacacggcaagagagggagtaagggggagggggagcgatggagcttccaagctctttttaacaaccagctctcca---------------ggaacttgctaaccccgtcg-tttggggcagcattgatctgttcatgatggatccacctccatgactcaaacaccttcccataggcccaaactcccaccctgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgtatcctcagcacgttctatggttactatgagagctataactgagaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 5361 2440 - 21488 AATGCTGGGAATGAGATGGGGAGAATGGCAAGTCGACTGTAGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACT--CAGACATTGGATTCACCTCGGGGTAACTAGGAATCCCTACATGATTAATAGCGACTGACATGAAAATAAGGGAGGCCCAGGTATGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTCGACACCAAGTGGATGAAGTAGATGGATATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTACTGGGTTTGATTTTCCTAGTTGTTTAATCCTTGCTTCATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTAGAAATGAAGGGACCT-ATTATAGCATAATATACAAGTCTGTGAAcggtggctcgctcccgtaacccagcactgcaggaggccaaggctggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcgcatcactgaactccagcctgggtgacacaaggagactccatctcaaaaaataaaaaaaagaaaTGC------ATAAATATAACATAACACACACGAATGATGCAGGCACCTGAATTCCAATCATCA-TTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAACATGAGATCATGTGGAAAATATGAAAGCCCAGTGAACCCACCGGCACAGGTCCTGGTATAGAGAACGTGCTCTGTTCATGGCATAAAACT--TGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCA--ATCACCTGTGGATATTCAGATAGACCATGGGGAGGTAAACACTAATACTCCTTGGAGTGAGTTCAGATGTTGGAATCAGAGATCAGCGCCAGCACTAGCCCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGATGGTATGGAAGCAACAGATGGTCGAGGGGGTGGTCCTTCCCCCAGCCTCTCGGGTGGAACAGCAGCCTCACATGTGTCTCCCGAGATCACAAAGAGTAGCACGTTTCACACCGCCTTCAACACTATTTCCTGGCTGTCTGACATAAGAGAATTCTACTTCGCTTCTTTT-ATCTTGATTTCACTTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTGACTCAAGAATTCTGTGGATGTAGAAACTGTAAAGCACATTCGCTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTaaacacctcctgtactgcacccggggctatgccaattcctatcactcaccgtcactccagggagacagaacacacagggaatacattaaatagacagattcattactaacagataagcagc-agtgacaacagaagcctac-tttcactgtgagccagtctctcaaggctcagaaaagctgctcgggatatatggagtcaccccatttgcagtgtagctggaagaagccagaaagcagcccagcatgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaagaataggaagacagcccaggctgttctgggacattcctcctgatctcaggacattgctgtcttag--tccattttTgggaggcggagcttgcagtgagccctgattgcgccactgcactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaagaaCacttgagcctgggtaacttctaaagaaaagagatctgtttgcctcacagttctgcaggctgtactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacagggcaagagagggagcaagggggagggggagcagtggagcttccaagctctttataacaaccagctctccaggaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggattcactgccatgacccaaacacctcccaagaggcccaacctcccacaatgggggttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtaGTTGTATCCTCAGCACTTCCTATGGTTACTATGAGAGCTATAACTGAGAA i nomLeu3.chr10_GL398297_2_random T 15750 C 0 s papAnu2.chr19 47720864 2362 + 51301725 AACGCTGGGAATGGGATGGGGAGAATTACAAGACcactggagagaga-ggagagcacACTGGGCACACAGGAAACTAAGGAGGAACAAGGAGTGTGTGTTTTATACTCACAGCCATTGGATTCACCTCAGGGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGTGTAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATACAGGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCACTGGGTTTGATTTTCCTAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTATTCCTCCTACACATAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAACGGTTGCTCATGCCTCTAACCCAGCActgcaggaggccaaggcaggtggattccatgaagtcaggagttcaagaccagcctggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtcgagatcacatcactgcactccaacctgggtgactcaaggagactccgtctcaaagaataaaaataagacatgC------ATAAATATAATGTAACACACATGAATGACAATGGCACCTGGATTACCAtcatcatttttctatttctctataatTACTTCTTTGATCCTTTATCTTATCTATTAGGCAATCAGCCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCTTGAGATcatatagaaaatatgaaagcTCCCTGAAGCCACCAGCACAGGTCCTGGAATAGAGGAAGTGCTCTGCTCATCGCAAAATGCT--GGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCA--ATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACACTAATACTACTTGCAGTGAGTTCAGATCTTGGAATCAGAGATCAGCATCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCACGGAAGGACAGGTTGTATTGAAGCAATAGATGGTGGAGGGCATTGTCCTTCCCCCAGCCTCTCGTGTAGAACAGCAACCTAAAATATGACTCCCAAGATCACAAA-AGTAGCACGTTTCCAACGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCGCGTTTTTG-ATCttgatttcacttttctttccttttcttggagAATGTAA-TTGTTTGAGTCAGGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCCAGTTCAGTCTTTCCAGAGAAGACTCTTAACACCTCCTGTACTGCACCTGGGGCTATGCCAATTCCTATCACTCACCGTCACTCCAGGGAGACAGAACACACAGAGAATACGTGACATGAGCAGGTTCATTACTAACACAAAAGCAGCAAGTGACAACTGAAGTGTATATTTCAATGTGAGCCAGTCCCTCAAGGCTCAGAAAAGCTGCTCAGGACATATAGAATCACCCCATATGCAGTGTATCTGGGGGAACCCGAAAATCAGCCCAGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGACGTCCTCCTCTGGGAAGAACAGGAAGACAGCCCA-GCTGTTCTGGGACGTTTCTCCTGATCTCACGATGctaatgtcttag--tccatttttg---------------------------ttgctat--------------------------------------------------aaaagaacacTTGAGCCTGGGTAACTTCTCAAGATAAGCGATTTATTTgcctcacaattctgcaggctgtactagaagcatggcaccagcatctatTTCTTGTAATGACCTCAGGCTGCTCCCACTCtggcagaagggaaggagggtCTGTGTGTGCAGAGACCACAGAGATCACACGGCAGGAGAGGGAGCAAGG-GGAAGGGGCACAATGGAGTTTCCAAGCTCTGTTTAAAAACCAGCTCTCCAGGAACTAATAGAGGGAGAACTTGCTAACCCCGTCG-TATGGGacggcattaatctattcatgatggatccacctccatgacccaaatacGTCCCAATAGCCCCAACCTCCCACATTGGCGGTTAAATTTCAATGTGCTGTTTGAAGGGGTCAAACATCTAAACTAAAGCAGTTGTATCTTCAGCACATTCTATGGTTACTATGAGAGCTATAACTGAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47399465 2366 + 50890351 AACGCTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGG-ACAAGGAGTGTGTGTTTTACACTCACAGCCATTATATTCACCTCAGCGTAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAACATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACCGTGGAAAACGCGATTCCCGCCCCACTGGTGAAACGTGGTGCTGATTTAGACACTAAATGAATGAAGGACATGGATATAAGATATGTTTGTGAGGTAGAATCATTTGCAGGGAGGACTCGCTGGGTTTGATTTTCCTAGTTGTTTAATCCTTGCTTAATTAAATTCTTTCTGAGATTTATTCCTCCTGCATGTAAATCAATACCTGGCAGAGGAGTGACAGATAGATGAGGGGTGGTGGAAATGAAGGGACCTAATTACAACATAATATACAAGGCTGTGAAcggttgctcatgcctctaacccagcactgcaggaggccaaggcaggtggattccatgaagtcacgagttcaagaccagactggccaacatggtgaaaccctatctctaataaaaatacaaatattagctgagcatggtggtgcatgcctgtaatcccagctcctactctggaggaggaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagttgagatcacatcactgcactccaacctgggtgactcaaggagactctgtctcaaagaataaaaTTAAGAAATGC------ATAAATATAATGTAACATACATGAATGACAATGGCACCTGGATTACCATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCAACCTAAAACCTCTTCCCCATTT-GCTTTCTGTGAGCGTGAGATCATATAGAAAATATGAAAGCTCCCTGAACCCACCAGCACAGGTCCTGGAATAGAGGAAGTGCTCTGCTCATCGCAAAATGCT--GGCCCCCTCACCCAAATCCCCCACCTCACCCCTACTTCCAATATCACCTGTGGAGATTCAGATAGACCATGGGGAAGTAAACACTAATACTCCTTAGAGTGAGTTCAGATCTTGGAATCAGAGATCAGCACCAGCACTAGCTCCTGGTCCCCTTTCCTACTAATCCATGGAAGGACAGGTTGTTTTGAAGCAATAGATGGTGGAGGGTATTATCCTTCCCCCAGCCTCTCGTGTAGAAGAGCAACCTAATATATGACTCCCGAGATCACAAAGAGTAGCACGTTTCCAATGGGCTTCAACGCTATTTCCTGGCTGTTTGACGTAAGAGAATTCTGCTTCGCGTTTTTG-ATCTTGATTTCACTTTTCTTTCCTTTTCTTGGAGAATGTAAGTTGTTTGAGTCAAGAGTGCTGTGCATGTAGAAATCCTAAAGCACATTCACTGTGCATGAATCCGAGTTCAGTCTTCCCAGAGAAGACTCTTAACACATCCTGTactgcacctggggctgtgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatatgtgacataagcaggttcattactaacacaaaagcagcaagtgacaactgaagggtatatttcaatgtgagccagtcccccaaggctcagaaaagctgctcaggacatatagaatcaccccatatgcagtgtatctgggggaacccgaaaatcagcccagcctggattttgtcccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctaggaagaacaggaagacagcccaggctgttctgggacgttcctcctgatctcacgacgctaatgtcttag--tccatttttg---------------------------ttgctat--------------------------------------------------aaaagaacacttgagcctgggtaacttctaaagataagcgatttatttgcctcacagttccgcaggctgtactagaagcatggcaccagcatctatttcttgtaatgacctcaggctgctcccattctggcagaagggaaggagggtctgtgtgtgcagagaccagagagatcacacggcaagagagggagcaagg-ggaaggggcgcaatggagcttccaagctctgtttaacaaccagctctccaggaactaatagagggagaacttgctaaccccgtcg-tatgggacagcattaatctattcatgatggatccacctccatgacccaaatatgtcccaatagccccaacctcccacattgggggttaaatttcaatgtgctgtttgaaggggtcaaacatctaaactaaagcagttgtatcttcagcacattctatggttactatgagagctataactgagaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60529319 4 + 64156825 I a score=156036.000000 s hg38.chr19_GL949753v2_alt 477334 96 + 796479 agcaggggaaagctaggtcTCCCGCCATTTGGGTGCTTGTCCTAAAGAGACGTTGTATGTGGTTACCTGCCAATCAAGAAATGCGAGACAATTCAT s panTro4.chr19 59669414 96 + 63644993 agcaggaggaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGCTGTATGTGGTTACCTGTCAATCAAGAAATGCAAGACAATTCAT i panTro4.chr19 C 0 I 2202 s ponAbe2.chr19 56627290 96 + 60714840 agtgggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7801 96 - 21488 AGCAGGAGAAAGCTGGGTCTCCCACCATCTGGGTGCTTGTCCTAAAGAGACACTGTATGTGGTTACCTGTCAATCAAGAAATGCGAGACAATTCAT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60529323 96 + 64156825 agcaggagaaAGCTGGGTCTCCCGACATCAGGCCGCTTGTCCTAAGGAGACATTCCACATCGTTACCTGTCAATCAAGAAACGAGAGACAATCCAT i rheMac3.chr19 I 4 C 0 s papAnu2.chr19 47723226 96 + 51301725 AGCAGGAGAAAGCTGAGTCTCCCACCATGTGGGTGCACGTCCTAAAGAGACGTTGTATATGGTTACCTGACCATCAAGAAATGCGAGACAATCCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47401831 96 + 50890351 agcaggagaaagcggggtcTCCCACCATGTGGGTGCATGTCCTAAAGAGACGTTGTATATGGCTACCTGTCAATCAAGAAATGCAAGACAATCCAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=1226134.000000 s hg38.chr19_GL949753v2_alt 477430 736 + 796479 AAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACCAGCAGGATGGTCCCTGGCCCAAGACAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGATTCCCTTCCCCTGCCTTCAGCTCACAGACCGTTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGATAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTCTTTTGTTGACTTCCGTCTTCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGCGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGC s panTro4.chr19 59671712 737 + 63644993 aaaGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACCCCAAACACCTGCACGTTCTGATTGGGACCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGCTGCTCCAACAAAAAAAAGTAAGTCTCATGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGGAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTGTCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTATGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTATGGCCTCCCCCTGTATGTTGGTATCTGCTTATGAAACGAGGAGCCTGAAGTGCCCTCTGAGCTGTTTTGATGACTTCCATCTTCTACAGATGCTGCCGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCGTGGCT--AGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGC i panTro4.chr19 I 2202 C 0 s ponAbe2.chr19 56627386 735 + 60714840 CAAGAGCAACGGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGATCTCAGTGGTCAAAATCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAA-GTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCAGGCAGGTGTGTGTTCCTCACTGGCAGGATAGTCCCTGGCCCAAAGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCTCTACCTTCAGCTGACAGACCAATGCGTGATTCGGAACTGTATCGTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACACAATCAATGGGATGGGAACTCAGAGCTATTCAT-GGATGGGTCCTTGAGCTCAGAGAGATTGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTTTGTTGGTATCTGCTTATGAAATGAGGACCCACAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACAGAACTGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCT--ACTCTTATTCCCAAACAGTCCTGAAAAATGTGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 7897 735 - 21488 AAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGACCTCAATGGTCATCATCCCCTTCGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGCAGCAGAGGCCAGACAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACGCAGATGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGAAGGAGC--CAGAGGCAGGGCTTTGTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTACCCTCACGTCCCCTGCAGCCACTCACATCCAAGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCA-GCTGCTGGCAACTGAGGGACCTCAGGCACCTACGGCCTCCCCC-GTATGTTGGTATCTGCTTATGAAATGAGGACCCAGAAGTGCCCTCTGAGCTGTCTTGATGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTGCCCCTCAGCCCAGCCTCATGGATACAGTCTTATTCCCAAAGAGTCCTGAAAAATGTGAGC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60529419 735 + 64156825 AACAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTTTTCTTCCTCCAGGTAACCCTAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCA---TCTTCTTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGA-GTAAGTCTCACGAAGCAGAGGCCAGAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCGGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGAAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCGTGACAGGCAGAAAGTGGGAGGCAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAGGCACCTCAGGCATCTACGGCCTCCCCCTGTGTGTTGTAATCTGCACATGAAATGAGGACCCAGATGGGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGCCTCGTGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAGC i rheMac3.chr19 C 0 T 4045 s papAnu2.chr19 47723322 738 + 51301725 AGAGAGGAACTGCTGTGATTAGCTTCTTGTTGGTGCCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACcatcctcttcttctttctcctgcatCGCTGGCGCTCCAATGAAAAGG-GTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCCTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACTGGCAGGATGGTCCCCGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTTCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATTCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCTATTTATGGGATGGGTCCTTGAACTAAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGCACCTACGGCCTCCCCCTGTGTGTTGGGCTCTGCACATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTCCGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGTGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGCCCCAGCCTCGTGGATATAGTCTTATTCCCTACTAGTCCTGAAGAATGTGAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47401927 738 + 50890351 AGAGAGGAACTGCTATGATTAGCTACTTGTTGGTGCCTCGTCTTCCTCCAGGTATCCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCATCCTCTTCTTCTTTCTCCTACATCGCTGGTGCTCCAACGAAAAGG-GTAAGTCTCACGAAGCAGAGGCCACAGACCTCCGGGCCGAGTGGGGAATCAGGATGGGAGCACGTAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGATGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGGCAGAATCACTGGGATGGAAATTGAGAGCTATTCATGAGATGGGTCCTTGAACTCAGAGAGATAGAATGTCTGAGTCTGGCTGTTGGCAACTGAGGGACCTCGGGCACCTATGGCCTCCCCCTGTGTGTTGGAGTCTGAACATGAAACGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGGAGTGGAAAGAACAGTGAACAGGGAGGTAGGTCCTCCTCACCCCAGCCTCATGGATATAGTCTTATTCCCTAATAGTCCTGAAGAATGTGAGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T a score=424419.000000 s hg38.chr19_GL949753v2_alt 478166 363 + 796479 ACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGATTCTGATGAACAAGACCATCAGGAGGTGTCATACGCATAATTGGATCACTGTGTTTTCACACAGAGAGAAATCACTCGCCCTTCTGAGAGGCCCAAGACACCCCCAACAGATACCAGCATGTACATAGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTTCTGTCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACAT s panTro4.chr19 59672449 363 + 63644993 ACCCTCCCTCACTCAGCATTTCCCTTGCTCCAGGATTCTGTTGAACAAGACTCTCAGGAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGACGCCCAAGACACCCCCAACAGATACCAGCGTGTACACGGAACTTCCAAATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCACCACAGTCAGGCCTTGAGGGGATCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCGTCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56628121 363 + 60714840 ACCCTCTCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAACAGGTGTCATACGCATAATTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTTTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTGTACACGGAACTTCCAAGTGCTGAACCCAGATCCAAAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGATCTTCTCGGGAGACAACAGGCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATCGCTCTTCCTCACACCATGAATCTGAACGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 8632 360 - 21488 ACCCTCCCTCACTCAGCATTTCCCTCTCTCCAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGGATCACTGCGTTTTCACACAGAGAAGAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCATCATGTACACGGAGCTTCCAGATGCTGAGCCCAGATCCAAAGTTGTCTCCTGCCCACGAGCAGCACAGTCAGGCCTTGAGGGGGTCCTCTAGGGAGACAGCAGCCCTGTCTCAAACCCGGCTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGGATCGCTCTTCCTCACACCACAAATCTG---GT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47724060 346 + 51301725 -CCCTCCCTCACTCAATATTTCCCTCTCTGCAGGACCCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAACCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGTGTATACATAGAGCTTCCAGATGCTGAGCCCAGATTGAAAGTTG----------------ACCACAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTATCTCAAACCCAGCTTGCCAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGCGCGACTCTACATCTTAGGGCGTCGCTCTTCCTCACACCACGAATCTGAACAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47402665 346 + 50890351 -CTCTCCCTCACTCAACATTTCCCTCTCTCCAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTCCACACAGGAAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGATACCAGAGTGTACATAGAGCTTCCAGATGCTGAGCCCAGATCTAAAGTTG----------------ACCACAGTCAGGCCTTGAGGGGGTCCTCCAGGGAGACAACAGCCCTGTCTCAAACCCAGCTTGCCAGTTCCAATGTACAAGCAGCAGGAATCTTAAGGCGTGACTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55638848 2143 + 59248254 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=571356.000000 s hg38.chr19_GL949753v2_alt 478529 335 + 796479 GCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCacttgacccctgcccacctctccaacctaactagcttacttcctagt-ctacctgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacacagcacttaga--------------------cacgtgctgttccacc-tccct-------------------tcagactatctttcagccttctgccagcagtaaaacttataaa-ttttttaaataatttcaatgtagttttcccgccttcaaataaacatgtctgccctca s panTro4.chr19 59672812 356 + 63644993 GCCTCTCTCTTGTTTACAAATGTGTAAGGTCCCCACTGCCTGCTGGAGAGAAAACACACTCCTTTCCTTAGCCCAGAATTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttaga--------------------cacgtgctgttccaccttccctcatgctgttccacctccactcagactatctttcagccttctgtcagcagtaaaacttataaatttttttgaataatttcaatgtagttttccctccttcaaataaacatgtctgtcctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56628484 353 + 60714840 GCCTCTCTCTTGATTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACT-GTTTGCTTAACCCACAATTGTCCATTTCacttgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtcacactgaggaactcacagttccaaacatacaagaggctccctcttaacacggcacttaca--------------------cacgtgctgttccacctcccctcatgctgttccacctttccacagactattttccagccttctctcagcAGTGAAACTTATAAAGTTTTTTG--TGATTTCAATGTAGCTGTCTCCTCTTCAAATAAACATGTCTGCCCTCA i ponAbe2.chr19 C 0 I 32 s nomLeu3.chr10_GL398297_2_random 8992 356 - 21488 GTCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCCCTtgacctgtgcccacctctccaacctaactggcttacttcctagtcctacttgaggctgcgatcacactgaggaactcacaactccaaacacacaagaggctccttcttaacacagcacttaga--------------------cacgtgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCC-TCTGTCAGCAGTAAAACTTATAAATTTTTTTTAATAATTTCTATGTAGTTTTCCCTCCTTCAAATAAACATGTCTGCCCTCA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55636705 356 + 59248254 GCCTCTCTCTTGCTTGCCAATGTCTAAGGTCCTCACTGCCTGCTGGAAAGAAAACACACTCCCTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacagttccaatcatacaagaggctccgtcttaacatggcacttaga--------------------ctcatgctgttccaccttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCTTCTGTCAACAGTGAAACTTATAAATTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCA i macFas5.chr19 T 2143 C 0 s papAnu2.chr19 47724406 356 + 51301725 GCCTCTCTCTTGTTTTCCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTGAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACGAGAGGCTCTCTCTTAACACGGCACTTAGA--------------------CACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAaacttataaatttttaaaaataatttctacgTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47403011 376 + 50890351 GCCTCTCTCTTGCTTTCCAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTAAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgcagtcacactgaggaactcacaattccaaacatacgagaggctccctcttaacacggcacttagactcatgctgttccaccttccctcatgctgttccaccttccctcATGCTGTTCCACCTCCCCCCAGACTATCTTTCAGCCTTCTGTCAGCAGTGAAACTTACAAATTTTTAAAAATAATTTCAATGTAGTTGCCTCTTCTTCAAATAAACATGTCTACCCTCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=34684.000000 s hg38.chr19_GL949753v2_alt 478864 31 + 796479 tggtttcggtaacgagactcttctcttgcct s panTro4.chr19 59673168 31 + 63644993 tggtttcggtaatgggactctatttttgcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 9348 31 - 21488 TGGTTTCGGTAATGGGACTCTTTTCTTGCCT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637061 31 + 59248254 TGGTTTCAGTAATGTGACTCTTTTCTTGCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47724762 31 + 51301725 TGGTTTCAGTAATGTGACTCTTTTCTTGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47403387 31 + 50890351 TGATTTCAGTAATGTGACTCTTTTCTTGCCG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e ponAbe2.chr19 56628837 32 + 60714840 I e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=827808.000000 s hg38.chr19_GL949753v2_alt 478895 522 + 796479 aaggcttccggtgttatcattaccatgtccacataaccccatctgttctccattgggttctcagccctggactctgagcttctggaagcagaatggagcctgaattgtctctgAGACTCCAATTTCCATCCAAAGATACAGCACATAGGAGGCTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACATATCATCTTTCATAATATAAATATAcagtcggtcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttgagaaaaaaatccccgaagtttcaagaagcaaaaaactatgttgaatcgacacaaattgagtggcgtgtaggctgtgtcaggaattataagtaatcaag-agatgatttcatgtatacagga--ggatgtgcatgggtt s panTro4.chr19 59673199 519 + 63644993 acgacttctggtgttatcattaccatgtccacataagcccatatgttctccactgggttctcacccctagactctgagcttctgtaagcagagtggagcctcatttgtctctgggactccaatttccatccaaagatgcagcacataggaggtTCCAAGGATCGTGAATCACATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGTACAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATATCAACATATCATCTTTCATACTATAATTATAcagtcactcctccatatctgtgggatttacaggtctttattgaaccaagtataaatcaaaaatattcagag-aaaatatccacaaactttcaaaaagc--aagactgtgttgaatggacacaaatgaggcagtgtgtaggctgtatcaagaattataagtaaccaag-agatgattttatgtatacagga--ggatgtgcatgggtt i panTro4.chr19 C 0 I 44485 s ponAbe2.chr19 56628869 518 + 60714840 AAAGAAACCGCTGTTATCATTACCATGTCCACGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAACAGGGTGGAGCCTGATTTGTGTCTGAGACTCCAATTTCCTTCCAAACATGCAGCACATAGGAGGTTCCAAGAATCGTGAATGAGAT-AACAAGTGATATTCTTACTCTCTGCAGACCTGCAAAGCCGGCAGAGTCATTCCACAATAAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCACGAGGACACATATCAACACATCATCTTTCATACTATAAGTATAcagtcactcctctgtatctgtggggcttacaggtgtttattgaaccaagtataaatcaaaaatattcagag-aaaatatccacaaactttcaaaaagc--aaaactatgttgcatggacagaaatgaggtggtgtgtaggttgtatcaggaattataagtaatcaag-agacgatttaatgtatacatga--ggatgtgcatgggtt i ponAbe2.chr19 I 32 T 39324 s nomLeu3.chr10_GL398297_2_random 9379 523 - 21488 AAGGCTTCCGGTGTTATTATTACTATGTCCATATAACCCCATCTGTTCTCCACTAGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGGGTGGAGCCTGATTTTTCTCTGAGACTCCAATTTCCTTCCAAAGATGCAGCACATAGGAGGTTCCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACCATGAAACATTTGTAGAGTCACAGGCCTTGTTAGTCtcatctccacggggacacatatcaacacatcatctttcatactagaaatatacagtcgctcctccatatctgtggggtttacaggtgtttattgaaccaacaataaatcaaaaatattttgagaaaaaaatccctgaagtttcgaaaagcgaaaaactatgttgaatcgacacaaattgagtggtgtgtaggctgtgtcaggaagtataagtaatcaagaagatgatttcatgtatacagga--ggatgtgcatgggtt i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637092 515 + 59248254 AAAGTTTCCGGTGTTATCATTACTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTTGTCTCTGGGACTCCAATTTCCGTCCAAAGATGCAGCTCATGGGAGGATCCAGGGATCGTGAATCAGATGAACAAGTGATATTCTTACCCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATGTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGacacatgtcaacacatcatctttcataccataaatacacagtcgctcctctagatctgtggggtttacaggtgtttattaaaccaactataaatcaaaaatattcagag-aaaatat--acaaagtttc-aaaagc--aaaactatgttgaatggacacaaatggagtggtatgtatgctttgtcaggaattataaataatctag-agatgatttcatgtatacatga--gggtgtgcatgggtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47724793 513 + 51301725 GAAGTTTCCGGTGTTATCATCGCTATGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTCGTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTCCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagag-aaaatat--acaaagtttC-AAAAGC--AAAACTATGTTGAATGGACACAAATGGAGCGGTATGTATGCTGTGTCAggaattataaataatctag-agatgatttcatGTATACATGA--GGATATGCATGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47403418 515 + 50890351 GAAGTTTCCGGTGTTATCATTACTGTGTCCATGTAACCCCATCTGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGATTCGTCTCCAGGACTCCAATTT-CATCCAAAAATGCAGCACATAGGAGGTTCCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAACTGGCAGAGCCATTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCATCTCCACGGGGACACATGTCCACACATCATC-TTCATACTGTAAATACAcaggcgctcctccagacctgtgggatttacaggtgtttattaaaccaactataaatcaaaaatattcagag-aaaatat--acaaagtttc-aaaagc--aaaactatgttgaatggacacaaatggagcagtatgtatgctgtgtcaggaattataaataatctgg-agatgatttcatgtatacatgagggggtgtgcatgggtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=715188.000000 s hg38.chr19_GL949753v2_alt 479417 451 + 796479 ctatgcaattgctatgct-a--------ttttttttttttg-----------------agacagtctcactctctcacccaggctggagtgcagtggcgtgatctcaactcactgcaacctccgcctcccaggttcaagcgattgtcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaa-tttttttgtgtgtgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgaccttgtgatctacccagctcagcctcccaaagtgctgggattacgggcgtgagccacggtgcccagcttcactatgccatttcatgcaaggggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggtatagtgaaggacCATGGTATATAATTTTTATTTGTCAATCTTAA s panTro4.chr19 59718203 456 + 63644993 ctatgcaattgctatgct-attt----tttttttttttttg-----------------agacagtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcgagcgaatctcttccctcagcctccccagtagcctcccctaggattacaggcacgtgccaccatgcacagataaattttttttttttttgtatttttaggagagatggggtttcagaatgttggatgggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcatgagccacggtgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttggtatctgaatggggatcctggaaccaatcacccaggagtagtgaaggaccacGGTATATAATTTTTATTTGTCAATCTTAA i panTro4.chr19 I 44485 C 0 s ponAbe2.chr19 56590063 454 + 60714840 atatgcaattgctaggct-ttttgttgttgttgttgttttg-----------------agacagtctcagtctctcacccaggctggagtgcagtggcgcgatctcagctcactgcagcctccccctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctaggattacaggcatgtgccaccatgcacagataaattttttttat-----tatttttagtagagatgggctttcagaatattggaccggctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattccaggcgtgagccagggcgcccagcttcactatgccatttcatgcaagaggcttgagcatctgcagattttgatatctgaatggggatcctggaaccaatcacccaggaatagtgaaggaccactgTATATAATTTTTTTTTGT-AATCTTAA i ponAbe2.chr19 T 39324 C 0 s nomLeu3.chr10_GL398297_2_random 9902 448 - 21488 atatgcaattgctatgct-a---------tttttttttttg-----------------agacagtatcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcccaggttcaagtgattctcttgcctcagcctccccagtagcctcccctacgattacaggcacgtgccaccatgcacagataaatttttttttt---tgtatttttagtagagacggggtttcagaatgttggaccagctggtcttgaactcctgaccttgtgatctacccaactcagcctcccaaagtgctgggattacaggcgtgagccacggcgcccagcttcactaggccatttcctgcaagaggcttcagcatctgcagactttggtatctgaatggggatcctggaaccaatcacccaggaatagtgaagaaccactgtatataatttttatttgtcaatcttaa i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55637607 469 + 59248254 atatgcaattgctatgcc-ttttttgttttgttttgttttgttttgtttgtttgttttTcggagtctcactctctcacccaggctggagtgcagtggcacgatctcagctcactgcaacttctgcctcccaggttcaagtgattctcttgcctcagcctccccagtag------ctaggattacaggcacgtgccaccatgcacagataaattttttttcg--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttggaattacaggcgcgagccaccacgcccagcttcactgtgccatttcatgcaagaggcttgagcatctgcagattttggcatctgaatggggatcctggaaccaatcacccaggaatagtgaaggactactgtatataatttttatttgccaattttaa i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47725306 466 + 51301725 ATATGCAATTGctatgcc---ttttgttttgttttgttttg-tttgtttgtttgtttttcggagtctcactctctcacccaggctggagtgcagtggcgcgatctcagctcactgcaacttccgcctcccaggttcaagtgatcctcttgcctcagcctccccggtag------ctaggattacaggcatgtgccaccatgcacagataatttttttttct--ttgtatttttagcagagactgggtttcactatgttgagcaggctgttctcgaactcctgatcgcatgatccacccaactcagcctcccaaagtgttgaaattacaggcacgagccaccacgcccagcttcacTGTGCCATTTCATGCAAGAggcttgagcatctgcagattttggcaTCTGAatggggatcctggaaccaatcacCCAGGAATAGTGAAGGACGACCgtatataacttttatttgccaatttaaa i papAnu2.chr19 C 0 I 315 s chlSab2.chr6 47403933 469 + 50890351 atatgcaattgctatgccgtttttttttttgttttgttttg-tttgtttgttcatttttcggagtctcactctctcacccaggctggagtgcagtggtgcaatctcagctcactgcaacttccaccccccaggttcaagtgattctcttgcctcagcctccctggtag------ctaggattacaggaacgtgccaccatgcgcagataaattttttttct--ttgtatttttagtagagactgggtttcactatgttgagcaagctgttctcgaactcctgaccgcatgatccacccaactcagcctcccaaagtgttgggattacaggcgcaagacaccgcgcccagcttcactgtgccatttcatgcaagaggcttgagcatctgcagattttggcatctgaatggggatcctggaaccaatcacccaggaatagtgaaggacgactgTATATAATTTTTATTTGCCAATTTTAA i chlSab2.chr6 C 0 I 318 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=846109.000000 s hg38.chr19_GL949753v2_alt 479868 495 + 796479 AAATAAAGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgc------------ttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagtggcttgagctcagctcactgcaacctccgcctcccaggttcaagctattctgatgcct----cTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTCTT s panTro4.chr19 59718659 503 + 63644993 AAATAAAGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGCGTTTTTAAAgtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattccaccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacacttttctgcccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaaccccttaaaatttggtaacctcagtcctctgatttgttattATAGGTTATTTAGtttgc----ttttttttttttttttttttcttgagacacactcttcctctgtcacccaagctggagttcagtggctcgagctcagctcaatgcaacctccgcctcccaggttcaagcagttctcgtgcct----cTGGTTTAGTACTAGAAACTCAAGCAGGAAAATTAGAATGGCTTTTT i panTro4.chr19 C 0 T 44414 s ponAbe2.chr19 56590517 497 + 60714840 AAATAAAGCATAAAAAAAGTACAACAAGAAGAT-AAAAATAAGGAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttattttttgagaaaatattctattccaccttcaactacatggcagcctttgtcaactataa----agggactgtgtatccacagatgtattttagacacagttttctgtccagtggttctctgtatcccctctcatgaggatgctgcactttatgtaaccttatagaaccccttaaaatttggtaacctgagtcctctgatttgttattATAGGTTATTTAGtttgc---------tttttttttttttttcttgagacagactcttcctctgtcacccaagctggagttcagttgctcgagctcagctcactgcaacctccgcctcccaggttcaagccattctcgtgcct----cTGGTTTAGTACTAGAAACTCAAACAGGAAAATTAGAATGGCTTTTT i ponAbe2.chr19 C 0 I 39401 s nomLeu3.chr10_GL398297_2_random 10350 494 - 21488 aaataaaGCATAAAAAATTTACAACAACAAGATAAAAAATAAGAAGTGTTTTtatagtgtgaggataagtttagatttattttttcctacgtgtaaccctatggtcctgtgttatttgttgagaaaatattctattcctccttaaactacatggcagcctttgtcaactataa----agggactgtgtatccacggatgtattttagacacagttttctgcccagtggttctctgtatcccctctcatgaggatgctgcattttatataaacttatagaacctcttaaaatttggtaacctgagtcctctgatttgttattATAAGTTATTTAGtttgc-------------tttttttttttcttgagacagactcttcctctgtcacccaacctggagttcagtggcttgagctcagctcagggcaacctccgcctcccaggttcaagcaattctcgtgcct----cTGGTTTAGTACTAGACACTGAAGCAGGAAAATTAGAATGGCTTTTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55638390 506 + 59248254 aaataaaGCATAAAAAATGTATAACAACAAGATAAAATATAAGAAGTGTTTTtataatgtgaggataagttcagatttattttttcctacttgtaaccctgtggtcctgtgttatttgttgagaaaatattctattccaccttaaaccacatggcagcctttgtcaactataa----aggagctgtgtgtccacggatgtattttagacacaattttctgccccgtggttctctgtatcccctctcatgaggatgctgtactttatataaccttggagaaccccttaaaatgtggtaacctgagtcctctg-tttgttgttATAGGTTATTTAGTTTCCttttttttttttttttctttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggtacgagctcagctcactgcaacctccgcctcccagattcaagcacttcttgtgtcA----CTGGTTTAGTACAAGAAACTCAAGCAGGAAAATTAGAATGACTTTTT i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47726087 510 + 51301725 aaataaagcataaaaaatgtataacaacaagataaaaaataagaagtgttTTTATAATGTAAGGATaagttcagatttattttttcctacttgTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGCAGCCTTTGTCAACTATAA----AGTTGCTGTGTATCCACGGATGTATTTTAGACACAATTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGTTGTACTTTATATAACCTTGGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-TTTGTTGTTataggttattttttttctttttttttttttttttttttctttcttgagacagactcttcctctgtcacccaagctggagttcagtggcacgagctcagctcactgcaacctccgcctcccagattcaagcactTCTTGTGCCACTTTCTTGTTTAGTACAAGAAACTCAAGCAGGAAAATTAGAATGACTTTTT i papAnu2.chr19 I 315 C 0 s chlSab2.chr6 47404720 506 + 50890351 aaataaaGCATAAAAAATGTAT---AACAAGATAAAAAATAAGAAGTGTTTTTATAATGTGAGGATAAGTTCAGATTTCTTTTTTCCTACTTGTAACCCTGTGGTCCTGTGTTATTTGTTGAGAAAATATTCTATTCCACCTTAAACCACATGGTAGCCTGTGTCAACTATAAATTTAGGAGCTGTATATCCACGGATGTATTTTAGACACAGTTTTCTGCCCAGTGGTTCTCTGTATCCCCTCTCATGAGGATGCTGTACTTTATATAACCTTAGAGAACCCCTTAAAATGTGGTAACCTGAGTCCTCTG-TTTGTTGTTATAGGTTATTTAGTttcctttttttttttttttt-ttcctttcttgagacagactcttcctctgtcacccaagttggatttcagtggtacgagctcagctcactgcaacctccacctcccagattcaagcacttctcgtgccA----CTGGTTTAGTACAAGAAACTCAAGTAGGAAAATTAGAATGACTTTTT i chlSab2.chr6 I 318 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=335320.000000 s hg38.chr19_GL949753v2_alt 480363 237 + 796479 GTCACAATTACTCTGATAATGTTAAT------------------------------------AATACCTGTTAGACATTTTGCACATTACATATGAAGAAGAGTTTGAATCTCAGATAAAAACAA---AAATACATCAAAAATCTTTAATGTAAGCACAGAATTCAATCATCTCGTGTATGAGAGGTTGGATCTGAGACGTCTTTTGAGTCTGGTCGTAGTGAAGGACGCAAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCG s panTro4.chr19 59674748 239 + 63644993 GTCACAATGACTCTGAAAACATTAAT------------------------------------AATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACGTGAAAACTCTTTCATGTTATCACAGATTTTAGGCATCTCATGTTTGGGAGGTTGGATCTGAGACATGCTTTGAGT-TGGTCATAGTGAAGGACACTAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCG i panTro4.chr19 T 44414 C 0 s ponAbe2.chr19 56630415 239 + 60714840 GTCACAATGACTCTGAAAACCTTAAT------------------------------------AATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTCGTGTTCGGGAGGTTGGATCCGAGACGTGTTTTGAGT-TGGTCATAGTAAAGGACGCGAGGTGTCAATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCA i ponAbe2.chr19 I 39401 C 0 s nomLeu3.chr10_GL398297_2_random 10844 237 - 21488 GTCACAATTCCTCTGATAATGCTAAT------------------------------------AATACCTCTTAGATATCTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAA---AAATACATCAAAAGTCTTTAATGTAAGCACAGAATTCAATCATCTTGTGTATGAGAGGTTGGCTCTGAGACGTCTTTTGAGTCTGGTCATAGTGAATGACGCAAGGTGGCAATCGTAGTCACAACAATTTCCAGGAAGCCATGTTCCG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55638896 261 + 59248254 GTCACAATTGTTCTGATAATGTTAATAATACTTgagcgagactccgtctcaaaaaaaaaaaaaaTACTTGTTAGATATTTTGCATATTACACATGAAG---AGTTTGAATCTCAGATAAAAACAACAAAAGTACATCAAAAGTCTTTAATGTAACC-CAGAATTCAATCATCTTGTGTTCG-AAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGACGCAAGGTG---------GTCACAACAATTTCCAGGAAGCCATTTTCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726597 236 + 51301725 GTCACAATTATTCTGATAATGTTAAT------------------------------------AATACTTGTCAGATATTTTGCATATTACACATGAAGA--AGTTTgaatctcagataaaaacaacaaaagtacaTCAAAAGTCTTTAATGTAACC-CGGAATTCAATCATCTTGTGTTCGAAAGACTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGAAGCAAGGTGGCAATTGTAGTCACAACAATTTCCAGGAAGCCATTTTCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47405226 238 + 50890351 GTCACAATTATTCTGATAATGTTAAT------------------------------------AATACTTGTTAGATATTTTGCACATTACACATGAAGAAGAGTTTGAATCTCAGATAAAAACAACAAAAGTACATCAAAAGTCTTTAATATAACC-CAGAATTCAATCATCTTGTGTTGGAAAGATTGGATCTGAGACGTGTTTTGAGC-TGGTCATAGTGAATGAAGCAAAGTGGCAATTGTAGTCACAACAGTTTCCAGGAAGCCATTTTCTG i chlSab2.chr6 C 0 I 26748 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=182545.000000 s hg38.chr19_GL949753v2_alt 480600 108 + 796479 CTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAAATA s panTro4.chr19 59674987 108 + 63644993 CTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630654 108 + 60714840 CTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGTGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11081 108 - 21488 CTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACATCACCCTCCCATGATGTGGTCAACATGTAAACTGCATGGGCAGGGCGCCAGATA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639157 108 + 59248254 CTCTTGGCTGGAGGCCCGCTGGGCATCATGTAACGTAGAAACAGCCTGCATACGTCACCCTCCCATGATGTGGTCGGCATGTCAACTGCATGGGCAGAGCGCCACATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47726833 108 + 51301725 CTCTTGGCTGGAGGCCCGCTGGGCGTCATGCAAGGTAGAAACAGCCTGCGTATGTCACCCTCCCATGATGTGGTGAGCATGTCAACTGCATGGGCAGGGCGCCACATA i papAnu2.chr19 C 0 I 17831 s chlSab2.chr6 47432212 108 + 50890351 CTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATA i chlSab2.chr6 I 26748 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=7833.000000 s hg38.chr19_GL949753v2_alt 480708 4 + 796479 ACAT s panTro4.chr19 59675095 4 + 63644993 ACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630762 4 + 60714840 ACAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11189 4 - 21488 ACAT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639265 4 + 59248254 ACAT i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47744772 4 + 51301725 ACAT i papAnu2.chr19 I 17831 C 0 s chlSab2.chr6 47432320 4 + 50890351 ACAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e rheMac3.chr19 60530154 4045 + 64156825 T a score=121378.000000 s hg38.chr19_GL949753v2_alt 480712 108 + 796479 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACAGCA------CCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA s panTro4.chr19 59675099 108 + 63644993 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGGTGAGTCCTGGAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630766 108 + 60714840 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCTGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCGTCAGCATGGCGTATGTTGGTGAGTCCTGGAAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11193 108 - 21488 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACAGACGGCA------CCATGTCGCTTATGGTCGTCAGTATGGCATGTGTTGGTGAGTCCTGGAAGGGAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47744776 114 + 51301725 CCTCTGCACCGGTCAGTCGAGCAGAGTCACTGCGTCCTGGCAGCAGAAGCTGCACCAAGTCCATGTCGCTCACGGTCGTCATCCTGGCCTGTCTTGGTGAGTCCTGGAAGGGAA i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47432324 108 + 50890351 CCTGTGCGCTGCTGAGCTGAGCTGGGGCGCAGCCGCCTGTCTGCACCGGCAGCA------CCATGTCGCTCATGGTCGTCAGCGTGGCATGTGTTGGTGAGTCCTGCAAGGGAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=20090.000000 s hg38.chr19_GL949753v2_alt 480820 29 + 796479 TCGAGGGAGGGAGTGCGGGGATGGAGATC s panTro4.chr19 59675207 29 + 63644993 TAGAGGGAGGGAGTGCGGGAATGGAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630874 29 + 60714840 TCAAGGGAGGGAGTGCGGGGATCGAGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11301 29 - 21488 TCGACGGAGGGAGTGCGGGGATGGGGATC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47432432 29 + 50890351 TCGGCGGAGGAAGCACTGGGGTGGAGATC i chlSab2.chr6 C 0 I 37182 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=4671.000000 s hg38.chr19_GL949753v2_alt 480849 11 + 796479 GGGGCCCAGAG s panTro4.chr19 59675236 11 + 63644993 TGGGCCCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630903 11 + 60714840 TGGGCCCAGAG i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47469643 11 + 50890351 TGAGCCTGGAG i chlSab2.chr6 I 37182 I 77 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=-128.000000 s hg38.chr19_GL949753v2_alt 480860 1 + 796479 T s panTro4.chr19 59675247 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630914 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e chlSab2.chr6 47469654 77 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=9463.000000 s hg38.chr19_GL949753v2_alt 480861 26 + 796479 TGGAGATATAGGCCTGGAAGTGGAGT s panTro4.chr19 59675248 25 + 63644993 TGGAGATCTGGGCCTGGA-GTGGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630915 26 + 60714840 TGGAGATATAGGCCTGGAGGTGGACT i ponAbe2.chr19 C 0 I 16717 s chlSab2.chr6 47469731 25 + 50890351 TGGAGATATGGGCTTGGA-GTGGAGA i chlSab2.chr6 I 77 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=7110.000000 s hg38.chr19_GL949753v2_alt 480887 13 + 796479 TATGGGCCTAGAG s panTro4.chr19 59675273 13 + 63644993 TATGGGCCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647658 13 + 60714840 TATGGGCCTGGAG i ponAbe2.chr19 I 16717 T 44745 s chlSab2.chr6 47469756 13 + 50890351 TATGGGCCTAGAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=6351.000000 s hg38.chr19_GL949753v2_alt 480900 19 + 796479 ATGGAGTGATGGGCCTAGA s panTro4.chr19 59675286 19 + 63644993 ATGGAGTGATGGGCCTAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56602926 18 + 60714840 GTGGAGTTATGGGCCT-GA i ponAbe2.chr19 T 44745 C 0 s chlSab2.chr6 47469769 18 + 50890351 -TGTAGATATGGGCCTGGA i chlSab2.chr6 C 0 T 37326 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=7921.000000 s hg38.chr19_GL949753v2_alt 480919 29 + 796479 AGTGGAGATCTGGGCCTGGAGTGGAGATA s panTro4.chr19 59675305 29 + 63644993 AGTGGATATCTGGGCCTGGAGTGGAGATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56602944 29 + 60714840 AGTGGAGATCTGGGCCTGGAGTGGAGATA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e chlSab2.chr6 47469787 37326 + 50890351 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=2601.000000 s hg38.chr19_GL949753v2_alt 480948 12 + 796479 TGGGCCTGGAGG s panTro4.chr19 59675334 12 + 63644993 GGAATCTGGAAG i panTro4.chr19 C 0 I 27787 s ponAbe2.chr19 56602973 11 + 60714840 TGATCCTGGAG- i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47432461 12 + 50890351 TGGGCCTGGAGG i chlSab2.chr6 T 37326 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=-1107.000000 s hg38.chr19_GL949753v2_alt 480960 1 + 796479 -T s panTro4.chr19 59703133 1 + 63644993 -T i panTro4.chr19 I 27787 C 0 s ponAbe2.chr19 56602984 1 + 60714840 -T i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47432473 1 + 50890351 G- i chlSab2.chr6 C 0 T 42727 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=22316.000000 s hg38.chr19_GL949753v2_alt 480961 65 + 796479 TGAGATATGGGCCTGCA-GTAGAGATATGGGCTTGTAG-TGGAGACATGGGCCTGGAGATGGAGATA s panTro4.chr19 59703134 65 + 63644993 GGAGATATGGGCCTAGA-GTGGAGATATGAGCCTGGAGATGGAGATATGGGCCTGGAG-TGGATATA i panTro4.chr19 C 0 I 16449 s ponAbe2.chr19 56602985 64 + 60714840 GGAGGTATGGGCCTGGG-GTGGAGATACAGGCCTGGAG-CAGAGATACAAGCCTTGAG-TGGAGATA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47389747 67 + 50890351 GGAGATATGGGCCTAGAGGTGGAGATATGGGTCTAGAGGTGGAGATATGGGCCTAGAGGTGGAGATA i chlSab2.chr6 T 42727 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11330 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=7476.000000 s hg38.chr19_GL949753v2_alt 481026 11 + 796479 TGGGCCTGGAG s panTro4.chr19 59719648 11 + 63644993 TCGGCCTAGAG i panTro4.chr19 I 16449 C 0 s ponAbe2.chr19 56603049 11 + 60714840 TGGGCCTGGAG i ponAbe2.chr19 C 0 I 44611 s nomLeu3.chr10_GL398297_2_random 11330 11 - 21488 TCATCCTGGAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47389814 11 + 50890351 TGGGCCTGGAG i chlSab2.chr6 C 0 I 42686 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=38.000000 s hg38.chr19_GL949753v2_alt 481037 1 + 796479 A s panTro4.chr19 59719659 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 11341 1 - 21488 G i nomLeu3.chr10_GL398297_2_random C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e ponAbe2.chr19 56603060 44611 + 60714840 I e calJac3.chr22 45773030 3003 + 49145316 T e chlSab2.chr6 47389825 42686 + 50890351 I e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=12010.000000 s hg38.chr19_GL949753v2_alt 481038 21 + 796479 TGGAGATATGGGCCTGCAGTA s panTro4.chr19 59719660 21 + 63644993 TAAAGATCTGGGCCTGGAGTG i panTro4.chr19 C 0 T 44334 s ponAbe2.chr19 56647671 21 + 60714840 TGGAGATAGGAACCTGGATGG i ponAbe2.chr19 I 44611 C 0 s nomLeu3.chr10_GL398297_2_random 11342 21 - 21488 TAAAGATATGGGCCTGGAGGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47432511 21 + 50890351 TGGAGATCTGGGCCTGGAGTG i chlSab2.chr6 I 42686 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=25678.000000 s hg38.chr19_GL949753v2_alt 481059 42 + 796479 GAGATAGGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGA s panTro4.chr19 59675347 42 + 63644993 GAGATAGGAGCCTGGACTGGAGATATTGGCCTGGGGTGGACA i panTro4.chr19 T 44334 C 0 s ponAbe2.chr19 56647692 42 + 60714840 GAGATAGGAGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGT i ponAbe2.chr19 C 0 T 16793 s nomLeu3.chr10_GL398297_2_random 11363 41 - 21488 GAGATCTGGGTCTGATGTGGAGATATGGGACTGGAGTGAGT- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47432532 42 + 50890351 GAGATATGATCCTGGAGTGGAGATCTGGGCCTGGAGTGGAGA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=30548.000000 s hg38.chr19_GL949753v2_alt 481101 52 + 796479 TATGGGCCTGAAGTGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGAG s panTro4.chr19 59675389 52 + 63644993 TATGAGACTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630941 50 + 60714840 GATGGGCCTGGAGTGGAGATCTAGGCCTGGA-GTGGAGATCTGGGCCTGGA- i ponAbe2.chr19 T 16793 C 0 s nomLeu3.chr10_GL398297_2_random 11404 52 - 21488 TCTGGGCCTGAAGTGGAGATGTGGGACAGGAAGTGTTGATCTGGGCCTGGAG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47432574 50 + 50890351 TCTGGGCCTGGAGTGGAGATCTGGGCCTGGA-GTGGAGATATGATCCTGGA- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=31950.000000 s hg38.chr19_GL949753v2_alt 481153 87 + 796479 GTGGAGATATGGGCCTGG--------------------AGTGGAGATATGGGTCTGGAGGTGGAGATACGGGCCTGCAGTAGAGATATGGGCCTGGAGTGGAGATAT s panTro4.chr19 59675441 106 + 63644993 GTGGAGATATGGGCCTGGAGGTGGAGTTACGGGCCTCTAGTAGACATACGGGCCTGGAG-TGGAGACATGGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56630991 86 + 60714840 GTGGACATCTGGGCCTGG--------------------AGTGGAGATCTGGGCCTGGAG-TAGAGTTACGGGCCTGCAGTAGAGATATGGGCCTGGAGCGCAGATAT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47432624 85 + 50890351 GTGGAGATATGGGCCTGG---------------------ATGGAGATATGGGCCTGGAG-GGGAGATATTGGTTTGGAGGGGAGATCTGGGCCTGGAGTAGAGATAT i chlSab2.chr6 C 0 T 42701 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=39259.000000 s hg38.chr19_GL949753v2_alt 481240 87 + 796479 GGGCCAGGAG-TGGAGTTATGGGCCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGGCCTAGG-AAGGAGATATGGGCCTGGGT s panTro4.chr19 59675547 88 + 63644993 GGGCCTGGAGGTGGAGATATGGGCCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGGCCTAGG-ATGGAGATATGGGCCTGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631077 87 + 60714840 GGGCCAGGAG-TGGAGATGTGGGTCTAGAGGTGGATATCTGGGCCTGGAGTGGAGATATGGGCCTAGG-ATGGAGATATGGGTCTGGCT i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47390008 88 + 50890351 GGGCCTGGAG-TGGAGATATGGGTCTAGAGGTGGAGATATGGGCCTGAAGTGGAGATATGGGCCTAGACGTGGAGATAAGGGCCTAGAG i chlSab2.chr6 T 42701 I 58172 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=64963.000000 s hg38.chr19_GL949753v2_alt 481327 197 + 796479 GTGGAGATATGGGACTGGAGAGGTGATATGGGCCTGGAGTGGAGATATGGGCTTAGGGTGGAGTTCTGGGCCTGGGGCGGAGATATGGGACTGGATTGGAGATAGGGGCCTAGGGTGGAGATCTGAGCCTGGATTGG-------------------CGATATGGGCCTAGGGTGGAAATAT-------------------CAGCCTGGAGTGGAGATATGGGCTTGGGGTGGGGA s panTro4.chr19 59675635 235 + 63644993 GTGGAGATATGGGACTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGGGTGGATATCTGGGCCTGGGTTGGAGATAAGGGCCTGGATTGGAGATATGGGCCTAGGGTGGAGATCTGAGCCTGGATTGGAGATACGGGCGTAGATTGGCGATATGGGCTTAGGGTGGAAATATAGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGGGCGGGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631164 159 + 60714840 GGGGAGATAtgggactggagtggagatatgggcctgaagtggagatatgggcttggagtggagatctgggcctgggg-------------------tggagatatgggcctagggtgga--------------------------------------aatatcggcctggagtggagatat-------------------gggcctggagtggagatatgggcttgggatgggga i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47448268 197 + 50890351 GTGGAGATATGGGCCTGGAGTGGAGATATGGGTTTGGTGTGGAGATATGGGCCTAGGGTTGAGATATGGGCCTGGAGTGGAGATATTAGCCTGGATTGGAGATAAGGGTTTGGAGTGGAGATATGAGCCTGGAGTAC-------------------AGATATGAGCCTGGAGTGGAGATAT-------------------CAGCATGGAGCGGACATGTGGGCCTGTTGTGTAGA i chlSab2.chr6 I 58172 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e papAnu2.chr19 47744890 18 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=5969.000000 s hg38.chr19_GL949753v2_alt 481524 13 + 796479 TATGGGCC----TGGAA s panTro4.chr19 59675870 13 + 63644993 TATGGACC----TGGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631323 13 + 60714840 tatggacc----tggag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47744908 13 + 51301725 TACGGGCC----TGCAG i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47448465 17 + 50890351 TCTAGGCCTCGGTGCAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e nomLeu3.chr10_GL398297_2_random 11456 0 - 21488 C e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=607091.000000 s hg38.chr19_GL949753v2_alt 481537 670 + 796479 --------------ACTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTAACTTCAGCCCAGGAAGGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-GCTGGTTCGCCTGC-----AG--ATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTCGGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGTCCTGTCGGGGAGTCTCTCATAAACTAGGAAGAGAGGACCCTGGGGTGCTCAGCCCACATTTCTGACCTCG-CCTCCCTGGCCTCTCAACCCCTTGGCAGAGTCAAGTTCTGTGGGGACCAG---GGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTTG--GGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGATGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTTTATTTTCGTTCAGGCATCCGCTGATA-TCCATTCACAAAGGACATGCCCTCCACCTCATGTCT s panTro4.chr19 59675883 670 + 63644993 --------------GCTGGGTCTCTGCACAGCCGACAGCCCTGTTCTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTACCTTCGGCCCTGCAGAGGCCTGGCTGCCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTAC-----AG--ATGGATCATCCATTATGATCTTTCTTTCCAGGGTTCTTCTTGATGCAGGGGGCCTGGCCACACATGGGTGAGTCCTTCTCCGAACCTTAGGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACCGGA-------------------------------------GGGAAGTCCTGTCAGGGAGTCTCTCATAAACTAGGAAGAAGGGACCCTCGGATGCTCCGCCCACAGTTCTGACCTCG-CCTCCCTGGCCTTTCATTCCCTTGGCAGAGTCAAGTCCTGTGGGGACCAG---GGTTACACTAGGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCACTGCACCAGAAGAGGT-GGGAAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGCTTATTTTCATTCAGGAATCCACTGATA-TCCATTCACAAAGGACATGCCCTCCACCCCATGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56631336 668 + 60714840 --------------gctgggTCTCTGCACAGCCAACAGCCGTGTTCTTCGGTGCAGGTAGGCAGTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTAGCTGCCAAGACTCACAGCCCAGTGGGAGCAGCAAGGGAGG-CCTGATTTGCCTGC-----AG--ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTC---CTCCAAACCTTAGGGTGTCATC-TCCCCACA----GAACAGGATTTCCCCTAAATGGGA-------------------------------------GGGAAGTCCTGTCGGGGATTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTCG-CCTCCCTGACCTTTCATTCCCTTGGCAGAGTCAGGTTCTCTGGGGACCAG---GGTTAGACTGGGGTGCTCAAAGCTGGGGTGTGTGGTGG--GGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCATTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGT-GGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGACGGGGGCTCCATTGTTTATTTTTGTTCAGGCATCCACTGATATTCCATTCACAAAGGACATGCCCTCCACCCCATGTCT i ponAbe2.chr19 C 0 I 210 s nomLeu3.chr10_GL398297_2_random 11456 711 - 21488 --------------CCTGGGTCTCTGCACAGCCGAGAGCCCTGTTCTTGGCAGCAGGTAGGCAGCGAGGCTAAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCAAGACACACAGCCCAGTCGGGGCAGC-AGGGTGC-CCTGCTTTGCGTGCGGATGGG--ATGGATCCTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGCGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATC-TCCCCACA----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGCCCAGTGGGGGATTTTCTTATGAACAAGGATGAGGAGACCTGGGGGCGCTCAGCCCACAGTTCTGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGGGTCAGGTTTTGTGGGAACCCGGGAGGGTAGACTGGGGTCCCCCAAGCTGGGCTGTGCGGGGG--GGATGTGGTGTCACCGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCGTGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCTAAGAGGTG-GGGGAACCACAGCCATGGCCCTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTGTATTGTGGTTCACGCATTGGCTGATATTCCATTCACAAAGGACATGCCCTCGACTCCATGTCT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47744921 720 + 51301725 ATTCG------------GGGTCTCC---CAACGGGGAGCCGTGTT--CTGGAGCAAGCGGGTGGTGAGGCTGAGTGAACGTTCAGCCCAGCGAGG-------CGCCCAATGGC---------TGGGAGGAA-AGGGCAGG-------TTG-CTGC-----AGACATGAATAGTTCATCATGATCTTTCTTTGCAGGGTTCTTCTTGGACCAGAGGGTGTGGGCACACGTGGGTGAGTCCTTCCCAAA----TGATGGGTTGCCATCCCCACCGATACAAGTGAATTTTCCTGAGAAGGGAGGCAGGCAGCACAGAGGGTGGCTGATGGACTGACCGTGGGAAAGCCTGTGGGGAAATCTCTCGTGAACTAGGAAGAGGAGACCCTGGGATGCTCGGCCCTGAGTTCTGTCTTATCCCTCCCCAGCCGTTCTTCCCTGTGGCTGAGCCTAGCTCTGTGTGGCCCAG---GGAGAGACTTGGGCGCTCAAAGCTGGGGTGTCGGGGGATGGGATATGGTGTCACtggcagaggagggaagggaagcaaTGCTAGGAACAGCAGGTCCTCTGAGGACAAGAGGGTAAATCACTCTCTCCAGTGTTTCCATGATGGTCGGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGGAACCACAGTCACGACCCTGACATTCCAATCCCTCTGATGGGG-CTCAGTTGTTCATTATGGTTCAGGCATTAGCTGATATTCCATCCACAAAGGTCGTACCCTCAGCTGCATGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47448482 707 + 50890351 ATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTAGGCAGCCAGGGTGAGTTTACTTTCAGCCCAAAAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGC-----AG--ATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGGGTCATC-TCCCCACC----TAAGAGGATTTTCCTGAAACAGGA-------------------------------------GGGAAGTCCTGTCAGAGAGTCTCTCATACAATAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCCGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGG---GGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGA--GGAAGTGGTGTCAGCGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTGCATGACGGTCAGGGCTGCAATGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTTCTGATGGGG--------GCTCA-----GTTCATGCACTGGCTGATATTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=178059.000000 s hg38.chr19_GL949753v2_alt 482207 172 + 796479 ACCCTGTGTTGTTTTATGTGAGTAATCTTACAGTATCAAAATCTAGTAGGAGTCTCTTTACTCAGCACTTGCTCAAAGTTCTCAGCTGAGGCTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTCAGCCCTGGGCACCAAGGTGTGATAGTAGCCAT s panTro4.chr19 59676553 171 + 63644993 ACCTTGTGTTCTTTTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTC-TTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGACACCATGTCTTTGTGGGATGCGTCCTTCCTTTAGCCCTGGGCACCAAGGTGTGATAGCAGCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632214 171 + 60714840 ACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTC-TTACTCAGCACCTGCTCAAAGTTCTCAGCTGATACTTTTGTTGTAGGGAGACACCATGTCTTTGCGGGATGGGTCCTTCCTTTAGCCCTGGCCACCAAGGTGTGATAACAGCCAT i ponAbe2.chr19 I 210 C 0 s nomLeu3.chr10_GL398297_2_random 12167 168 - 21488 -ATTTGTGTTGTTTTCTGTGAGTAATCTTGCAGTATTCAAATCTAGTAAGAGTCGC-TTATTCAGCACTTGCTCAAAGTTCTCAGCTGACAC--TTGTTGTAGGGAGGCGCCAAGTCTATCCCAGGTGGGTCCTTCCTGTAGCCCTGGCCACCCAGGTGTGGTAGGGGCCTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47745641 171 + 51301725 ACTTTGTGTTGTTTGGTGTAACCAATCTTGCAGTATTAAAATCTAGTAAGGGTTCC-GTACTCAGCACCTGCTCAGAGTTTTCAGCCCATACTTTTGTTGTAGGGAGACGCCATGTCTATGTGGGATGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGTCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449189 171 + 50890351 ACTTTGTGGTGTTTTACGTGAGTCATCCTGCAGTATTAAAATCTAGTAAGAGTCCC-TTATTCAGCACTTGTTCAAAGTTCTCAGCTGACACCTTTGTTGTAGGAAGATGCGGTGTCTATGTGGGATGGGTCCCTCCTGTAGCCCCGGACACCCAGGTGTGGTAGGAGCCTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45773030 3003 + 49145316 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=271628.000000 s hg38.chr19_GL949753v2_alt 482379 194 + 796479 AGAAACGTGGAAAGCGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGTTCCACATCCTCCTCTCTAAGGCGGCGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTGTGGTGCCTCT---AGGACATGTCATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTT s panTro4.chr19 59676724 194 + 63644993 AGAAACGTGGAAAGCGAGGAGAATCTTCAGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGCAGTGCCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCCTGTGGTGCCCCC---AGGACATGTGATTCTTCGGTGTCACTCTTATCTTGGGTTTAACAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632385 194 + 60714840 AGAAACGTGGAAAGTGAGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCAGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGCCCAGCCTTCTGGTGCCTCC---AGGACATGTGATTCTTCGGTGTCATTCTTATCTTAGGTTTAACAACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12335 194 - 21488 AGAAAGGTGGAAAGTGGGGAGAATCTTCTGAGCACAGGGAGGGAGGGGCGGCTCCACATCCTCTTCTCTAAGGCAGTGCCTCCTTCTCCCCAAGGTGGTGAGGTCAAGCCCTTGCTGTCTGCCTCGCCCAGCACTGTGGTGCCTCC---AGGACATGTGACTCTTTGGTGTCATTCTTATCTTGGGTTTAACAACTT i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47745812 196 + 51301725 AGAAAGATGGAAAG-GGGAAGAATCTTCTAAGCACATGGAGGGAGGGGCGACTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGGTCAGGACAAACCCTTCTGCTCTGCCTGGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTTGGTGTCACTATCGTCCTGGGTTTAACATCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47449360 196 + 50890351 AGAAACATGGAAAG-GGGAAGAATCTTCTGAGCACATGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGCGGCACCTCCTTCTCCCCCAGGTGATCAGGACAAGCCCTTCCTGTCTGCCCAGCCCAGCGCTGTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTT i chlSab2.chr6 C 0 T 24491 s calJac3.chr22 45770027 194 + 49145316 AGAACAGTGGGAA--GAAGGAAAGCCCCCAAGGACAGTGGCGGGTGGGGGGCTCCACACTCCCCTCTCT-AGGCTGCGCCTCCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGTCACATT i calJac3.chr22 T 3003 C 0 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=118631.000000 s hg38.chr19_GL949753v2_alt 482573 93 + 796479 CAGTCTGTACAAGGAAGGTGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCCCTGTGACCCCCGCACA s panTro4.chr19 59676918 93 + 63644993 CAGTGTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTTTACAACAGAATATTCTGGAAGAGCCTTTTCATGGGCCCTGTGACCCAAGCACA i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56632579 93 + 60714840 CAGTCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAACAGAATATTCTGGAACAGCCTTTTCATGGGCTCTGTGACCCCAGCACA i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10_GL398297_2_random 12529 93 - 21488 CAGTCTGTACAAGGAAGACGGGGTGCCTGTCCCTGAGCTCTACAACTGAATATTCTGGAACAGCCTTTTAATGGGCCCTGTGACCCCAGCACA i nomLeu3.chr10_GL398297_2_random C 0 I 1 s papAnu2.chr19 47746008 93 + 51301725 CACGCTGTACAAGGAAGATGGGGTGCCTGTCCCTGAGCTCTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCTGTGACTGCAGCACA i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47425065 93 + 50890351 CACGCTGTACAAGGAAGACGGGGTGCCTGTCCCTGAGCTCTACAAAAGAATATTCTGGAACAGTTTCCTCATTAGCCCCGTGACTGCAGCACA i chlSab2.chr6 T 24491 I 24501 s calJac3.chr22 45770221 90 + 49145316 CAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCAC-ACTGGCCGTTCC--AATGACTTCACCATCAACCCTGTGACCCCAGGACA i calJac3.chr22 C 0 I 1 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=146696.000000 s hg38.chr19_GL949753v2_alt 482666 105 + 796479 ACAGGGACATACAGATGT--CGGGGTTCACACACACACTCCCCCAGTGGGTGGTCAGC---ACCCAGCAACCCCCTGGTGATCGTGGTCATAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59677012 105 + 63644993 GCAGGGACCTACAGATGC--CGGGGTTCACACCCACACTCCCCCAGTGGGTGGTCGGC---ACCCAGCAACCCCCTGGTGATCGTGGTCACAGGTCAGAGGGCTCCTGTC i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56632673 105 + 60714840 GCAGGGACCTATAGACGC--TGGTGTTCACACCCACACTCCCCCAGTGGGTGGTCAGC---ATCCAGCAACCCCCTGGTCATCATGGTCACAGTTCACAGGGCTCCTGTC i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10_GL398297_2_random 12623 105 - 21488 GCAGGGACCTACAGATGT--TGGGGTTCACACCCACACTCCCCCACTGTGTGGTCTGC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC i nomLeu3.chr10_GL398297_2_random I 1 C 0 s papAnu2.chr19 47746102 105 + 51301725 GCAGGGACCTACAGATGT--CGAGTTTTTCATCCGCACTCCCCCACTGAGTGGTCGGC---ACCCAGCAACCCCCTGGCGATCATGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47449659 105 + 50890351 GCAGGGACCTACAGATGT--CGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGC---ACTCAGCGACCCCCTGGCGATCAGGGTCACAGGTCAGAGGGCTCCTGTC i chlSab2.chr6 I 24501 C 0 s calJac3.chr22 45770312 105 + 49145316 GCAGGGACCTACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 I 1 I 914 e canFam3.chr1 102958238 202 + 122678785 T e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=710060.000000 s hg38.chr19_GL949753v2_alt 482771 612 + 796479 TTGGATTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCATGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGTGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatgtatgttataggggaagggactgaaggggaagatggagctc-------------------------atggggagacagcctggactgtcccactgggctcagtgtaatcacaagggtgcac-atgaaaggaggaggaagaggggagtggggattagagcagtccagtggaagtcttcacca----------gctttgaaggtggaggaaggccaagagccatgaatgcaggtggcctatagaggctggaaaagtcaag-gaactga--ttctccagagtctccagagggaacaaagccctgcagatgccttgattttagcccaggaaaaatagggtccaatttctg-tctccagtactggaaggtgtcagtgtggtctctcctgcttccatgcttctgataattttgtacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAAC s panTro4.chr19 59677117 623 + 63644993 TGGGATTCTCCTGGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGA--------------AGGCCCTGAGTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgctgggaagaataattgtccccagtgatgactgcattctaatccctggagtctgtgactatttatgttacaggggaagggactgaaggggaagatggagctcaggttgttgatgagttgaccttgagatggggagatggcctggactgtcccagtgggctcagtgtagtcacaagggtccac-atgaaaggaggaggaagatgagagtggggattagagcagcataatgggagtctccatca----------gctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaag-gaactga--ttctcctgagtctccagagggaacgaagccctacagatgccttgattttagcccacgaaaaacagggtcccatttctg-tctccagaattggaaggggtcagtgtgctctctcctgctgtcatgcttctgataattttctacagcaacaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56632778 638 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatagagctcaggttgttgatgagttgaccttgagatggggagacagcttggaatgtcccggtgggctcagtgtaatcacaagggtctacaacgaaaggaggaggaagaggggagtggggattagagcagcgtaatgagagtctccctca----------gctttggaggtggaggaaggccgtgagccacgaatgcaggtggcctatagaggctggaaaagtcaag-gaactga--ttctcctgagtctccagagggaatgaagccctgcaggtgccttgatttcactccaggaaaaacagggtccgatttctc-tctctagaattggaaggagtcaatgtgctctcttctgctgccattcttctgataattttctagagcagcaacaggaaaccaacacTGGAACCCAGATCAAGGACAAGTTAAGAaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 12728 637 - 21488 TGGGATTCTCCTTGTCCCACCTCCTAAGTCCCAGAGCTCCTGGTGGGCGTGTCCTTGAGGGTCCCATCACGCAGGCCCTGACTGTATTTGGGGGAAAGGGGCATTGAATACAGGGAAAGAGGTGCtgtggtgggaagaataattgtccccaatgatgactacattctaatccctggagtctgtgactatttatgttataggggaagggactgaaggggaagatggagctcaggtggttgatgagttgaccttgagatggggagacaacctggactgtccctctgggcacagtgtaatcacaagggtccac-atgaaaggaggaggaagaggggagtggggattagagcagcgcaatgggagtctccatca----------gctttgaaggtggaggaaggccacgagccatgaatgcaggtggcctgtagaggctggaaaagtcaag-gaactga--ttctcctgagtctccagagggaacgcagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttgtg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAAC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47746207 651 + 51301725 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGGTGGGGGTGTCCACCAGGGTCCCATCATCCAGGCCCTGACTGTATTTGGGGTAAAGGGGGATTGAATACATGGAAATGGGTGCTGTGGTGGGAAGAATAACTGTCCCCACTGATGGCCACATTGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCGGGGGACTGAAGGGGAAGATGGAGCTCAGGTTCTTGATGAGTtgaccttgagatggggagatggcCTGGACTGTCCCGCTGGGCTCAGTGGAATCACAAGGGTCCTC-AtgacaggaggaggaagaggggagtgGGGATTACAGCAGCATCATGGGAGACTCCATCAGCCACTGTgggctttgaaggtggaggaaggtcACGAGTCACAAAGGCAGGAGGCCTATAGGGGCTGGAGAAGTCAAGGGAACTGATTCTCCCCTGAGTCTCCAGAGGGAACACAGCCCTGTAGAtgccttgattttagctcagGAAGAACTGGATCCAATTTCTGTTCTCCAGAAGTGGAAGGGGTCAGTGtgttctctcctgctgccatgtttGTGATGATTTtctacagcagcaacaggaaaccaacacaggaacCCAGGTCAAGGACaagtttaaaaac i papAnu2.chr19 C 0 I 73 s chlSab2.chr6 47449764 645 + 50890351 TGGGCTTCTCCTTGTCCCACCTCCTGAATCCCAGAGCTTCTGCTGAGGGTGTCCACAAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTGAATACAGGGAAATGGGTGCtgtgatgggaagaataactgtccccaat-atggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaaganggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaa-acgagaagaggaggaggaggagagtggggattagagcagcgttgtgggagagtccatcagccactgtgggctttgaaggtggaggaaggccacgagccacaatggcaggtggcctctacgggctggagaagtcaagagaaccg---ctctgttgagtctccagagggaacacagttctgtagatgacttgattttagcccaggaagaactggatccaatttctg-tctccagaagtggaaggggtcagtgtgttctctcctgctgccatgtttgtgataattttctgccgcagcaacaggaaaccaacacaGGAA-CCAGGTCAAGGACAAGTtaagaaac i chlSab2.chr6 C 0 T 58332 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=51169.000000 s hg38.chr19_GL949753v2_alt 483383 70 + 796479 AACCCAAGGAAagccaggcatggtggcaggtgcatgtaatcctagcgactcaggaggctgagggcaggag s panTro4.chr19 59677740 70 + 63644993 GACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcctagcgactcggcaggctgagagcaggac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633416 70 + 60714840 gacacaaggatagctgggcatggtggcaggcccatgtaatcctagtggctccggaggctgagggcaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13365 70 - 21488 GACACAAGGAtagccgggcgtaatggcaggcacatgtaatcctagcgactcaggaggctgagggcagggg i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47392077 69 + 50890351 GGCCCAAGGAtagccgggcgtggtcgcaggcacatgtaatcctagtgactcgggaggctgag-gcaggag i chlSab2.chr6 T 58332 I 58315 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=413565.000000 s hg38.chr19_GL949753v2_alt 483453 518 + 796479 aatcacttgaacccaggaaacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaa--------aaTTAATTAATTAATTAAagaaaccaaagaaggagaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgatactcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTATTCATCAGTTCATATCTTCTGCCAAGGATTGCAATTCATCCAAAAGAGATTGAACCAGGCTGATAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTTCACCCCCACATAAACAGCAGGAAAGACATTAGTGTGAAATAGATACAACACCCCAAGAGATGAGGCTAAGCCCAGTGGGAAGGGAA s panTro4.chr19 59677810 518 + 63644993 aatcacttgaacccaggagacagacgttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgtctccaa--------aaTTAATTAATTAATTAAAGAAACCAAACAAAGAGAAGGTTGGCTACACCAAGATCATCAAGTGTGGGATGATGATGCCACAACCATGTTCCATCCACATAGGGAAGTGTTGATACTCCTCAAACCAGCACCAGGAGCCAGCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATAGCTCCTGCCAAGGATTCCAATTCGTCCAAAACAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATCGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAATGGGAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56633486 518 + 60714840 aaatgcttgaacccaggagacagaggttgcagggagccaagaccacaccaattcactccagcctgggcaaaggaatgagactctgtctccaa--------aaTTAATTAATTAATTAAagaaaccaaacaaggggaaggttggctaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacagagggaggggttgatgctcctccaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACAGTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATGCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCCGCCTATCCTGGTTCGTCTTCCACCCCTACATAGACAGCAGGAAAGACATTAGTGTGAAATAGATACAACAGGCCAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13435 517 - 21488 aatcacttgaacccaggagacagaggttgcagtgagccgagaccacaccacttcactccagcctgggcgacggagtgagactctgtctccaa--------aaTTAATTAATTAATTAAagaaaccaaacagggagaaggttggctaccctgagatcagcaacggtggggtgatgatgccaccaccaggctccatccacatagggaggggttgatcctcctcaaaccagcaccaggagccaccctatggaagct-gcaccatggagaaggcaccgacatggcgagagTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTGCTGATCAGTTCATACCTCCTGCCAAGGATTCCAGTTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGACAGCAGGAAAGACATTAGTGCCAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGTTGGAGGGAAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47450461 525 + 50890351 aatcgcttgaatccgggaggcagaagttgcagtgagccaagaccacaccactatactcctgcctgggtgaaaaagtgacactctgtctcaaaaatcaattaattaatcaattaattaaAGAAATCAAACAAGGAGAAGGTTGGCAACTCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTCGATGCTCCTAGAACCAGCACCAGGAGCCACCCTATGGAAGCTGAGGCCATGGAGAAGGCACAGGCATGGCAGGAGTGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATATGCAGCCTG-CCTGGATCCTCTTCCACCCCCACATAGATAGCGGGAAAGAGATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAACCCAGTGGGAAAGGCG i chlSab2.chr6 I 58315 C 0 e canFam3.chr1 102958238 202 + 122678785 T e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=45375.000000 s hg38.chr19_GL949753v2_alt 483971 55 + 796479 TCAGAGGCTACTa--------gagacagagggacagagaagaggg--agggagacagaTGGAAGG---- s panTro4.chr19 59678328 55 + 63644993 TCAGAGGCTACTA--------GAGACAGAGAGACAGAGAAGAGGG--AGGGAGACAGATGGAAGG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634004 53 + 60714840 TC--AGGCTACTA--------GAGACAGAGGGACAGAGAAGAGGG--AGGAAGACGGATGGAAGG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 13952 55 - 21488 TCAGAGGCTACTa--------gagacagagggacagagaagaggg--agggagacagaTGGAAGG---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47450986 55 + 50890351 TCTGAGGATACTA--------GAGACAGACGGACAGAGAAGAGGG--AGGGACACAGATGGAGGG---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958036 69 + 122678785 TCAGGGGCCACTGTCACCCCTGGGTGATGGGGTCCGGGGAGAGGGTCAGGAGCACAGGCTGAGATGGGG i canFam3.chr1 T 202 C 0 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e macFas5.chr19 55639269 3 + 59248254 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=72512.000000 s hg38.chr19_GL949753v2_alt 484026 72 + 796479 ACCTGCACCAGGAGTTAAGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGACAGACACCAG---- s panTro4.chr19 59678383 72 + 63644993 ACCTGCACCAGGAGTTATGGGCACAGAAAAGAACTTCAAGA--CACAGAGAGGAAGGAGAG------AGACAGACACCAG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634057 72 + 60714840 ACCTGCACCAGGAGATATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGACAGACACCAG---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14007 72 - 21488 ACCTGCACTGGGAGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGACAGACACCAG---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639272 71 + 59248254 ACCTGCAACAGGGGTTATGGGCACAGAAAAGAACACGGAGA--CACAGAGGAGGAGGAGAG------AGACAGACC-CGG---- i macFas5.chr19 I 3 C 0 s chlSab2.chr6 47451041 61 + 50890351 ACCTGCACCAGGGGAT-----------AAAAGACAGGGAGA--CACAGAGAGGAAGGAGAG------AGACAGACAGCCG---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958105 83 + 122678785 CCATGTTCTAGG-GACAGGGGCTGAAAAATGGCCGGTGAGGGTCATGGAGATGAAGGACATCCACTCAGAGAGACAAGAGGAGC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=34682.000000 s hg38.chr19_GL949753v2_alt 484098 33 + 796479 CAAGGGGAAGCCTCACTCA---TTCTAGGTGCCATG-------------- s panTro4.chr19 59678455 33 + 63644993 CGAGGGGAAGTCTCACTCA---TTCTAGGTGCCATG-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634129 33 + 60714840 TGAGGGGAAGCCTCACTCA---TTCCAGTTGCCATG-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14079 33 - 21488 AGAGGGGAAGCCTCCCTCA---TTCCAGGTGCCATG-------------- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639343 33 + 59248254 GGAGGGGAAGCCTCACTGA---TTCCAGGTCCCATG-------------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47451102 33 + 50890351 GGAGGGGAACCCTCACTCG---TTCCAGGTGCCATG-------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 30 + 49145316 CGAGGGAGAGCTTCACCC------TGAGGTCCCAGG-------------- i calJac3.chr22 I 914 C 0 s canFam3.chr1 102958188 50 + 122678785 TGAGAGGGGGTCCCACACAGAGTCTCTGGAGAGACGAAGGTGGTCCCCCA i canFam3.chr1 C 0 T 37065 e papAnu2.chr19 47746858 73 + 51301725 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=486997.000000 s hg38.chr19_GL949753v2_alt 484131 367 + 796479 GATGGGATGATAAAGAGAGACACCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCGCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTCAGGTTTGAGCACTTCCTTCTGCACAGAGAAGGGAAG---------TTTAAGGACACTTTGCACCTCATTGGAGAGCACCATGATGGGGTCT------CCAAAGCCAACTTCTCCATCGGTCCCATGATGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTCATCACAGGTGAGAGTGTCCGGAC s panTro4.chr19 59678488 367 + 63644993 GATGGGATGATAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACACAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAATCATCCTGCAATGTCGGTCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGAG---------TGTAACGACACTTTGCACGCCATTGGAGAGCTCCACGATGGGGTCT------CCGAGGCCAACTTCTCCATCGGTCCCATGACGGAAGACCTGGCAGGGACCTACAGATTCTACAGTTCTGTTCCTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634162 367 + 60714840 GATGGGATGATAAAGAGAGATGCCTTCTAAACTCCCAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTGGTGTTTGAGCACTTCCTTCTGCACAGAGAGGGGGAG---------TTTAACGACACTTTGCGCCTCATTGGAGAGCTCCATGATGGGGTCT------CCAAGGTCAACTTCTCCATCGGTCCCATGATGCCTACCCTTGCAGGGACCTACAGATGCTACGGTTCTCTTTCTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCATGATGACAGGTGAGAGTGTCCAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14112 367 - 21488 GATGGGATGATAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTCCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAAATGTCATGTTTGAGCACTTCCTTCTGCACAGAAAGGGGAAG---------TTTGAGGGCACTTTGAACCTCACTGGAGAGCTCCATGATGGGGTCT------CCAAGGCCAACTTCTCCATCGGTCCCATGAGGCACGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATGAGTGGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTGAGAGTGTCCGGAC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639376 366 + 59248254 GATGGGATGACAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCGCTGGTGAAATCAGGAGAGACGGTCGTCCTGCAATGTTGGTCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGAGAGGGGATC---------TCTGAGGA-CCCCTATGCCTCGTTGGAGAGCTCCATGATGGGGGCT------CCAAGGCCAACATCTCCATGGGTCCCATGACGCCTGCCCTTGCAGGGACCTACCAATGCTATGGTTCTTTTACTCACTCCCCCTATGAATGGTCAGTCCCCAGTGACCCCCTGGACATTGTGATCACAGGTGAGAGTGTCCAGAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47451135 367 + 50890351 GATATGATGACAAAGGGAGACGCCTTCTAAACTCACAACCTCTCTTTCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACAGTCATCCTACAATGTTCGTCAGATACCGTGTTTGGGCACTTCTTTCTGCAAAGTGAGGTGACC---------TTTGAGGAGCCCTTGCACCTTGTTGGAGAGCTCCGTGGTGGGGGTT------CCCAGGCCAACTATTCCATCCGTCCCACGATGTCTGCCCTTCCAGGGACCTACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCATGATCACAGGTGAGAGTGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771361 372 + 49145316 TGAGGGGTGAGGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCTCCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCACTCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCACACACAGCATTCCCAGGA-ACTTGACACGAGGTTGGAG--------GCTGGGACTTACTACGTCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTGTGGCTGGAC i calJac3.chr22 C 0 I 625 e canFam3.chr1 102958238 37065 + 122678785 T e papAnu2.chr19 47746858 73 + 51301725 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=812691.000000 s hg38.chr19_GL949753v2_alt 484498 677 + 796479 A---TTCTCATTGTCATTGGGCTGCAGAGTGAATGATCCACGACTTGGAACCCCCAGGTAGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGCTGAGGTTTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACGGAGgacagacacaggggccatacagggagttagaaaagacagaaagagttaaaagaga----cagacagacagacaTGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCACAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAG--GCCATGTTTATTCTGACACCTCTGCCTTCCATGTAATGGAG-AGTAACCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGTGGTCTCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAAAGGATCACTGAGAGGCACAGAGAAAAATCAGGAACACCAAAAAGCAAAGACATAAACACACGGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAA s panTro4.chr19 59678855 682 + 63644993 ATTCTTCTCATTGTCATTGGGATGGAGAGTGAATGATCCACGACTTGGAACCCCCAGGTAGTTCTAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTGACTTGGTGAAGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGATGGAAAGAGCTAAAGGACA----CAGACAGACAGACATGTCCCAGAGAGAGGTGTCCCTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCATAAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCCTGTGGCACCTACAGATGCTGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGCAGTCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGagagacacagagagaaatcagggacaccaaaaagcaaagacataaacacacagagaaagagccagaggaaggagattgagagactcacagacacataa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56634529 681 + 60714840 ATTCTTCTTATTGTCATTGGGATGCAGAGTGAATGATCCAGAACTTGGAG-GCCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTATGGGGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGATAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGAGAGCTAGAAAAGACACAAGGAGTTAAAGGAGA----CAGATAGACAGACATGTCCCAGAGAGAGGTGACCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGATTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCAAGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCGTCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTCCCCACACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACACACAGAGAATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 14479 680 - 21488 ATTCTTCTCATTGTCATTGGGACACAGAGTGAATGATCCAGGACTTGGAG-GCCCAGGTGGTTGTAAGGAAGATGAGCGTGGGGTTCTTATGAAGAGAGACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAAAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACCGGGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGA----CAGACAGACAGCCATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAAGTTAGCAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACTCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCA-GCCTTGTGGAACTTACAGATACCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAG-AGTAATCTTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCCGTGTCAACTTGCGGTCCCCACACTGGATTCTGAGGCTCATATTCAAAATAATCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACATAAACAGACAGAGAATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACACAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55639742 687 + 59248254 ATTCTTCTCATTGTCACTGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCAGGTTGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCACACAGGGAGGTAGAAAAGAGAGAAAGAAGTAAAGGAGACACTCAGACAGACAGACATGTCCCAGAGAGAGGTGCCCTTCCGTGCTGACTTTGTTCAGAGACCTGGCACAGGTTAGAAGCTTCATCTCTGTGTTACCTCCACAGAGTGATCTCTACCAGGAGAACCCAAGAGCACGCTTATTTCTCACCTTAGTTGGGCCCTGGGACCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTGATTCTGACACCTCTGCCTCGTGTTCAGGGGAGCCGTAACCTTCTCACGATATCATGGCCCCAGAACACCAACCCCTGTGTGCTGTGTGTACTTGGGGTCTCCAGACTGGATTCTGAGGCTCATATTCCAAACAACCACACATATGATAGGATTCCTGACAGACACAGAGAGAAATCAGGGACATTAAAAAGCAAAGGCATAAACACACAGAGAATGAGCCAGAGGAAGGAGACTGACAAGCTCACAGCCACATAA i macFas5.chr19 C 0 I 509 s chlSab2.chr6 47451502 685 + 50890351 ATTCTTCTCATTGTCACTGGGACACAGAGTGAATGATCCAGAACTTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGACAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCAGACAGGGAGGTAGAAAAGAGAGAAAGAGTTAAAGGGGACACTCAGACAGACAGACATATCCCAGAGAGAGGCGTCCTTCCATGCTGACCTTGCTCAGAGACTTGGCACAGGTTAGAAATTTCATTTCTGTTTTACCTCCACAAAGTG-TTTCTACCAAGAGAACCCAAGGACGCACATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGTACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCGTGCAGTGGAG-AGTCATCGTCCCAGGATATCGTGGCTCCAGAACACCAACCCCTGTATGCTGCGTGTACTTGGGGTCCCCAGATTGGATTCTGAGGTTCATATTCCACATAACCCCACATATGATAGGATTCCTGAGAGACACAGAGAGAAATCAGGAACATCAAAAAGCAAAGACATAAACACAAAGAGAATGAGCCAGAGGAAGGGGACTGAGAGACTCACAGACACATAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=218773.000000 s hg38.chr19_GL949753v2_alt 485175 203 + 796479 AGAGAGAGAAAAGAGGGCAGAGGAGTGGTGAGAATGATGGCAGGGAGCAGAGAAAAGCACTAAAATTAGAGTCCTGAGAGAGAGGCACAAGGACATAGAAACATGGAGATGT-GGGGATGAATTGCAGAGATTCCAAagagagctagagagaccgagaggcagagcaatac------------------agatgata---------------------gatgga----tagatatagatagatgata s panTro4.chr19 59679537 222 + 63644993 agagagag--aagagggcagagaagtggagacaatgatggaagagagcagagaAAACCACTAAAATTAGAGTCCTGAGGGCGAGGCACAAGGGCATAGAAAGATGGAGATGT-GGGGATGAATTGCAGAGATTCCAAAGAGAACTAGAGAGACCGAGAGGCAGAGCAagac------------------agatgatagatggatagatagagatagatgatgga----tagatatagatagatgata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635210 203 + 60714840 AGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCACGAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGT-GGGGATGAATTGCAGAGATTCcaaagagaactagaaagaccgagaggcagagcaagac------------------agatgata---------------------gatgga----tagatatagatagatgata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15159 203 - 21488 AGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCCCTAAAATTAGAGCCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGT-GGGGACGAATTGCAGCGATTCCAAAGAGAACtagagagaccgagagacagagcaagac------------------agatgata---------------------gatgga----tagatatagatagatgata i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55640938 215 + 59248254 aGAGAGAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGAAGCTGAGAAAAGCCCTAAAATCAGAGTCCTGAGGGAGAGGCACAAGGAGAGAGAAAGATGGAGATGTGGGGGATGAATTGCAGATATTTCAAAGACAACGAGACAGACTGAGAGGCAGAGAAAGACAAGGAGATGGagacagagagatg-ca---------------------gatgga----------tagatagatgata i macFas5.chr19 I 509 C 0 s chlSab2.chr6 47452187 225 + 50890351 AGAGAGAGGAAAGTGGGCAGAGGAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGT-GGGGATGGATTGCAGAGATTCCAAATAGAACTAGAAAAACTGAGAGGCAGAGAAAGACAAGGAAatggagagagacatatgata---------------------gatgaatggatagatgtagatagatgata i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I e rheMac3.chr19 60530154 4045 + 64156825 T a score=569454.000000 s hg38.chr19_GL949753v2_alt 485378 462 + 796479 aataggtagatgatagata----ataggttaaagatacatagatgatgattgattgattc----attaatagataatacatagagatgatgatgatga----------------a--------gacagataatacgtacagatagagaggcagac---------------agaaatcat--agagagagagatgatacatacatataaata----acagatgattgatggataga----tagacaactgata------------gatacatagatgatatatagatatagatgacaggtag----agaatttgtagataggcaccga---------------------------atagataaatagatagatcgacagata-atagat--------------------------agaAATATGCAGAAAGTTATGAACAGGACACAACGTGAGAAACTTAGAATTTA--AAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAACGGAAAACA----TATCTAGAGGTGGGGAAGCGAGGTCagagacctagagagacagagaaggtgg s panTro4.chr19 59679759 474 + 63644993 aataggtagatgatagata----ataggttatagatacatagatgatgattgattgattc----attaatagatgatacatagagatgatgatgatga----------------agatagatggatagataATACATagagatagagaggaagac---------aaagagagaaatcatagagagagagagaTGATACATatatatagata----atagatgattgatg----ga----tagacaattgata------------gataaatagatgacatagagatatagacgacaggtag----agaatttgtagataggcaccga---------------------------atagataaatagatagattgatagata-atagat--------------------------agaAATCTGCAGAAAGTTATGAACGGGTCACAAACTGAGAAACTCAGAGTTAA--AAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAACGGAAAACA----TATGTAGAGGCAGGGAAGTGAGGTCAGAGACCTagagagacagagaaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635413 475 + 60714840 aataggtagatgatagata----ataggttatagatacatagaagatgattgattgattcattgattaatagatgatacatagagatgatgatgatga----------------agata----gatagataatacatagagatagagaggcagac---------aaagagagaaatcatagagagagagagatgatacatagatatagata----atagatgattgatggctaga----tagacaattggta------------gataaatagatgatatatagatatagatgacaggtag----agaatttgtagataggcaccga---------------------------atagataaatagatagatcgatagaga-atagat--------------------------agaaatatgcag-aagttatg-acaggacacaa-gtgag-aactcagaattta--aaaagt--acattaagtc-accaacccaaggagggtcagagagaataaaacaATCCAAAAAGGGAAAACATATCTATCTAGAGTTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGAGAAGGTAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15362 473 - 21488 ggcaggtagatgatagata----ataggttgtagatacatagatgatgattgatggattc----attaacggatgatacatagagaggatgatgatga----------------agata----gatagataatacatagagatagagaggcagac---------aaagagag-aatcatagagagagggagatgatacatagatatagata----atagatgattgatggatgga----tagacaattgata------------gataaatagatgatatatagatacagatgagaggtag----agaatttgtagataggcaccaa---------------------------atagataaatagatagcttgatagata-atagat--------------------------agaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTTA--AAAAAGTAACATCAAGTCAACCAATCCAAGGGGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACA----TATCTAGAGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGACAAGGTGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60526109 486 + 64156825 aataggtagatggtagataacagataggttgtaggtacatagatgatgattgatggattgattgatagacagatgatacatagagataatgatgatga----------------agata----gacagatgatacatagagatatagaggcagac---------agagagag-------------agatagatgatacacagatatagataacacataggtgattgatggatagagagctagatagacaattgatagatacagagatagatagatgatacataaatatagatgatagatag----ataatttgtagatagacaccaa-------------------------------atagataaatagatcgatagata-atagac--------------------------agaAATATGCAGAAAGTTGTGAACAGGACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAACCCAAGGAGGGTCAGAAAGAATAAAACCATGCAAAAAGGGGAAACA----TTCCTCGGGGTGGGGAAGTGAGGTCAGAGACCTAGAGAGACAGACAAGGCAG i rheMac3.chr19 T 4045 C 0 s macFas5.chr19 55641153 542 + 59248254 aataggtagatgatagataatagataggttatagatacatacatgatgactgattggt------------agatgatacatagagatgataatgatgatgataaatagacaaagagata----gatacatgatacatagagatagagaggcagacatgtaacagaaatagag-------------agagagaggatacatagatatagata----atagctgattgatggataca----tagatagttaatt------------gatagagagatgatacatatatatagatgatagatagataaataatttgtagatacacaccaaatagttaaatagacgatagatagatagatagatagatagatagatagatagatagatagacagatagataacggatacatagataatagaAATATGCAGAAAATTTTGAACAAGACAGAAAGTGAGAGACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAACCAATCCAAGGAGGGTCAGAGAGAATAAAATGGTACAAAGAAAAAAAACA----TAGCTAGGGATGGGGAAGTGAGGTCAGAGACCTAGGGACATGGAGAAGGTGG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47452412 453 + 50890351 aataggtaggtgatagataatggatgggttatagatacatagatgatgattgatagat------------atat----------------------------------------agata----cgtagatgatacatagagacagagaggcagac---------agatagagagg------gaacagacagatgatacacagatatagataatagatagatggtggatagataga----gagacagaaaatt----gatacagagatagatacatgcaacatagataCAGATTACagatag----ataattgatagattgataggta---------------------------gtagatagatagatcgatcgatagata-atagat--------------------------agaAATGTGCAGAAGGTTATGAAGAAGACAGAAAGTTAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAA-CAATCCAAGGAGGATCAGAGAGAAGAAAACAATACAAAAAGCGAAAACA----CACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTagagagacagagaaagtgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e papAnu2.chr19 47746858 73 + 51301725 I a score=66955.000000 s hg38.chr19_GL949753v2_alt 485840 45 + 796479 aagaaggaaatagacatgaagagagat-gggg-tggagggtgagaga s panTro4.chr19 59680233 43 + 63644993 aaggaggaaatagacatgaagagagtt-gggg-tggagggt--gaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635888 39 + 60714840 AAGGAGGAAGTAGACATGAAGAGAGAT-GGGG-TGGAGGGT------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15835 40 - 21488 AAGGAGGAAATAGACACGAAGAGAGATGGGGG-TGGAGGGT------ i nomLeu3.chr10_GL398297_2_random C 0 C 0 s rheMac3.chr19 60526595 46 + 64156825 AAGGAGAAAATAGACATGAAGAGAGAA-GGGGCTGGAGGGTGAGAGA i rheMac3.chr19 C 0 I 3513 s macFas5.chr19 55641695 45 + 59248254 AAGGAGGAAATAGACATGAagggagac-ggag-tgaagggtgagaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47746931 43 + 51301725 AGGGAGGGAAT-GACAGG--GAGAGTc-gggggtggagggtgagaga i papAnu2.chr19 I 73 C 0 s chlSab2.chr6 47452865 39 + 50890351 aaggaggaaacagacatgaagagagaT-GGGG-TGGAGGGT------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I a score=123853.000000 s hg38.chr19_GL949753v2_alt 485885 89 + 796479 -----------------------------------------------------------gagagagagagagCATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGATCCTCCCTGAGG s panTro4.chr19 59680276 91 + 63644993 -----------------------------------------------------------gagagagagagagCATTAGGCCA-TAGAGCAGGGG-AGTCACTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56635927 87 + 60714840 -------------------------------------------------------------GAGAGAGAGAGCATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15875 87 - 21488 -------------------------------------------------------------GAGAGAGAGAGCATTACGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAG--GTGAAGGCAGCTGTGACAAGGAAGAACCTCCCTGAGG i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55641740 152 + 59248254 cagagagagagagagaaggtgaaaggagaaaatagacatgaagagacatggggtggagggtaagaaagagagCATTAGGTCACTAGAGCAGGTGCAGGGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47746974 81 + 51301725 ---------------------------------------------------------------------gagcattaggTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTGTGAGGGAAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452904 86 + 50890351 ---------------------------------------------------------------GACAGAGAGCATTAGGTCA-TAGAGCAGGGG-AGTGAGTTCTCAGCTCAGGTGTGAAGGGA-CTGTGACAAGGAAGAACCTCCCTGAAG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45771733 625 + 49145316 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=627591.000000 s hg38.chr19_GL949753v2_alt 485974 327 + 796479 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCTGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAATGTAGGTTCTCTGCAGGGCCCAAGGTCAACGGAACATTCCAGGCCGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGAACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCATACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAACC s panTro4.chr19 59680367 327 + 63644993 --AAAATGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTTCTGCAGCTCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAGGGGGAGGTCCATGAACGTAGGCTCCCTGCAGTGCGCACCATCAATGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACGCTCCCTACGAGTGGTCAAACTCGAGTGATCCACTGCTTGTTTCCGTCACCGGTGAGGAAACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636014 327 + 60714840 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCAGGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCCGGAGGTCCTATGACATCTACCATTTATCCAGGGAGCAGGGGAGCCGTGAATGTAGGCTCCCTGCAGTGTCCAAGGTCAATGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGTCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAAACTCGAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGAAAACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 15962 326 - 21488 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGCTCCAGGAGCTCCTATGACGTGTACCATCTATCCAGAGAGGAGGGGGGCCATGAACGTAGGCTCTCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCAGACTTTCCTCTGGGCCCTGCCA------CTCACGGAGAGGCCTACAAATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCCAAGTGACCCACTGCTTATTTCTGTCACAGGTGAG-CAACC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55641892 327 + 59248254 --AAACTGCCTCTTCTCCTTCCGGGTCTATACAGGAAATGTTCTCTCTCAGCCCAGCCGGGCCCCACTGTTCATGCAGAAGAGAACATGACCTGATCCTGCAGCTCCCGGAGCTCCTTTGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACTGAGGCTCCCTGCAGTGCCGAGGGTCCATGGAACATTCCAGGCCGACTTCCCTCTGGAGCCTGCCA------CCCACGGAGGGACGTTCAGATGCTTTGGCTCTTTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCCATTTCTGTCACAGGTGAGGAAACC i macFas5.chr19 C 0 I 7990 s papAnu2.chr19 47747055 327 + 51301725 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCCCACAGGAGAGAACATGACCTTGTCCTGCAGTTCCCGGCACTCCTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCATGAACTTAGGCTCCCTGCAGTGCCAAGCGTCAATGGAACATTCCAGGCTGACTTCCCTCTGGGCCCTGCCA------CCCATGGAGGGAACTACAGATGCTTCGGCTCTCTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAGTGACCCACTGCCTGTTTCtgtcacaggtgaggaaacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452990 327 + 50890351 --AAACTGCCTCTTCTCCTTCCAGGTCTATATGACAAACCTTCTCTCTCAGCCCAGCCAGGCCCCACAGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGACCTTGTTTGACATGTACCATCTATCCAGGGAGGGGGAGGCCCGTGACCTTAGGCTCCCTGCAGTGCCAAACATCAATGGAACATTCCAGGCCGACTTCTCTCTGGGCCCTGCCA------CCAACGGAGGAACCTACAGATGCTTTGGTTCTTTCCATATCGCACCCTACGAGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACAGGTGAGGAAACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772358 333 + 49145316 AAAATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAGC-- i calJac3.chr22 I 625 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=450600.000000 s hg38.chr19_GL949753v2_alt 486301 343 + 796479 CCATATCTGTCTCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----TAAGCATGGACAGATGCAGAGA-GAAGACGAAGCTTGGGTGTGAGGGAGGGATCAGGGCACAGGATGGCAGACAGGGCACCTCCAAACCCTCCTACACGGCCTGCATGAAGGCCCGCGGCCAGGGCTCCAGGCACACAGGCAGATGGAGAAAGCGGTCAGGAGAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGAAGATCAGAGGTTCCCTCAGCCCCTCAACATTACCCA-TTTCCCAGAAGCCCATCCTGGCCTCTCACCCACACAGGGATGTC s panTro4.chr19 59680694 344 + 63644993 CCATACCTGTCCCATGTCCTAT---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGATGCAGAGA-TAAGACGCAGCATGCGTGTGAGGGAGGGATCAGGGCGCAGGACGGCAGACACAGCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCTCCGATTAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGACACCCAGA-GAAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTGCCCAGAAGCCCTTCCTGGCCTCTCACCCACACAGAGATGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636341 343 + 60714840 CCATATCTGTCTCATGTCCTGT---------GATCCTAAAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GGAGCATGGACAGATGCAGAGA-GAACACGCAGCTTGGGTGTGAGGGTGGGGTCAGGGCGCAGGATGGCAGACACGTCACCTCCAAACCCTCCTGCATGGCCTGCATGGAGGCCTCCGATCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGATAGACCCAGA-GGA-GGAAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCTCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCCTCCTGGCCTCTCACCCACACAGAGATGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16288 344 - 21488 CCATATCTGTCCCATGTCCTAC---------GATCCTAGAGCCTTAGCTGAGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAAGGATGGACAGATGCAGAGA-GAAGACGAAGCTTGTGTGTGAGGGCGGGGTCAGGGCACAGGATGGCAGACACGGCACCTCCAAACCCTCCTGCACGGCCTGCATGGATGCCCGCAGTCAGGGCTCCAGGCACCCAGGCAGATGGAGAAAGCGGTCAGGAGAGACCCAGA-GGAGGGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAGCCCATCGTGGCCTCTCACCCACACGGAGATGTC i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47747382 342 + 51301725 ccATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCCATAGCTGGGGAGCTTCCTGCTG--------------------ATGATGGAGA----GAGGGATGGACAGATGCAGAGA-GAAGGCGAAGCCTCGGTGTGAGGTTGGGGTCAGGGCACAGGAGGGCAGACACAGCACAT-CAAACCCTCCCGCACTGCCTGCATGGAGGCCTGCGGTCAGGGCTCCAGGCACCCaggcagatggagaaactggTCAGGACAGACCCAGA-GGG-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCAGAAACCCATCCTGGCCTCTCACCCACACAGAGATAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453317 342 + 50890351 CCATGCCTGTCCCATGTCTTAT---------GATCCCAGAGCCATAG-TGAGGAACTTGCTGCTG--------------------ATGATGGAGA----GAAGCATGGACAGGTTCAGAGA-GAAGACCAAGCCTCAGTGTGAGGGCAGGATCAGGACGCAGGATGGCAGAGAGGGCACCTCCAAACCCTCCTGCATGGCCTGTGTGGTGGTCCGCGGTCAGGGCTCCAGGCCCCCAGGCAGATGGAGAAACTGGTCAGGACAGACCCAGA-GGA-GGGAGACTGGGCTCAGTTTGGGGAGATCAGAGGTTCCCTCAGCCCCTCAACCTTACCCA-TTTCCCTGAAGCCCATCCTGGCCTCTCACCCACACAGACATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772691 339 + 49145316 CCACACCTGCCACCTGTCCTGTTGTCCACTAAGTCCCAGAGCCATACCAGAGGGGCATCCCACTGGGCACACAGGGGCATTAGGTATTCTGGACAAAATGAAGCAGTGAAAAATACAGACAGGGATGAACAGGCTGAGTGGGATGGGGCTGTCAGGGTGCAGGGC-ATAGACAGGGCAGCTCTGCGCCCTCC------------------GCCC----------CTCC-----------TACATGAAGAAAGAGGTCAGGGCAAACACAGGTGGAGGTGAGGCCAGATGGAGTTTGTTGAGATCAGAGGTTGCCTCAGCCCCTCGCCCTTTTCCATTTTCTCCGAAGCCCCTCCTGACCCCTCA-CCACAGAGAGATTTC i calJac3.chr22 C 0 T 2969 e canFam3.chr1 102958238 37065 + 122678785 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=77522.000000 s hg38.chr19_GL949753v2_alt 486644 69 + 796479 ATCACCAGCAACCCCTACACCCTTTAC-TTTTGTTTGAAGAAATATTTATTGAGGATAAATATACCTATA s panTro4.chr19 59681038 70 + 63644993 ATCACCAGCAACCCCTACATCCTTTTCTTTTTGTTTGAAAAAATATTTATTGAGGTTAAATATACCTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636684 70 + 60714840 ATCACCAGCAACCCCTACACCCTTTTCTTTTTCTTTGAAAAAATGtttattgaggtgaaatatacccata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16632 70 - 21488 ATCACCAGCAACCCTTACACCCTTTTCTTTTTGTTTGAAAAAATAtttattgtgattaaatatacctata i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47747724 70 + 51301725 ATCACTAGCAACCCTTACACCCTTTTCTTTTCAATTGAAAAAATGCTGATTGAGGTTAAGTATACCTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47453659 70 + 50890351 ATCACCAGCAACCCTTGCACCTTTTTCTTTTCATTTGAAAAAATATTTGttgaggttaaatatacctata i chlSab2.chr6 C 0 T 58301 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=20075.000000 s hg38.chr19_GL949753v2_alt 486713 24 + 796479 TAGCTTACCACCTTTAACAttttt s panTro4.chr19 59681108 22 + 63644993 TAGCTTACCACCTTTAACG--ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56636754 24 + 60714840 tagcttaccacctttaacattttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16702 19 - 21488 tagcttaccacctttaaca----- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47747794 24 + 51301725 TAATTTACCAAcgttaccattttt i papAnu2.chr19 C 0 T 31551 s chlSab2.chr6 47395428 24 + 50890351 tagtttaccacttttaacattttt i chlSab2.chr6 T 58301 I 3 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=379683.000000 s hg38.chr19_GL949753v2_alt 486737 334 + 796479 tttttttttgaggcagagtcta--gctctgtcccctatgctgcagtgcagtggcacaatctcagctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcagccacctgagtagctggtgctacaggcgcgcaccaccacgccaggctactttttgtatttttagtagagaggtggtttcaccatgttggtcgagctggtctccaactcctgaccacgtgatccacccgcatctgcctcccaaagtgctgggattacaggcatgagccaccactcccagccACATTTACCATTTTTAAGTGTAAAGTCTAGTGGTCATAAATACAT s panTro4.chr19 59681130 334 + 63644993 tttttttttgaggtggagtcta--gctctgtcccctatgcaggaatgcagtggcacaatctcagctcactgtaacctccgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtactacaggcgcgcatcaccacgccaggctactttttgtatttttagtagagagggggtttcaccatgttggtcgagctggtctctaactcctgaccacctgatccacccgtctcagcctcccaaagtgctgggattacaggcatgagccactgcgcccggccACGTTTACCAATTTTAAGTGTAAGGTCTAGTGGTCATAAATGCAT i panTro4.chr19 C 0 T 18641 s ponAbe2.chr19 56636778 331 + 60714840 tttttttt---ggtggagtcta--gctctgtcccctatgctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaaacgattctcctacctcagccacctgagtagctggtactacaggcacgcaccaccatgccaggctactttttgtattttgagtagagagggggtttcaccatgttggtcgagctggtctcgaactcctgaccacgtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccacttttaccatttttaagtgtaaattctagtggtcataaatacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 16721 323 - 21488 tttttttttgaggtggagtcta--gctctgtcccctacgctggagtgcagtggcacaatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagccacctgagtagctggtaccacaggtgcacaccaccatgccagcttactttct-tatttttagt--agggggggtttcaccctgttgttcaagctggtctcgaactcctgaccaggtgatccaccc------acctcccaaagtgctgggattataggcatgagccaacgcgcccggccacgtttaccatttttaagtgtaaagcctagtggtcataaatac-- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716267 328 + 51301725 ------tttgaggcgaagtcta--gctctgtcccctatgctggagtacagtggcacaacctcggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagccacccgagtagccggtactacaggtgtgcaccaccaggccaagctaatttttgtatttttagtagagacagggtttcatcatattggtcgggttggtctccaactcctgacctcgtgacctgcctgcctcggcctcccgaagtgctgggattataggtgtgagccaccactcccagccacctttaccatttttaagtgtaaagtcAAGTGgtcataaatacat i papAnu2.chr19 T 31551 C 0 s chlSab2.chr6 47395455 336 + 50890351 tttttttttgaggcggagtctcttgctctgtcccctatgctggagtacagtggtgcaatctcggctcactgcaacctccgcctcctgggttcaagcaattatcctgcctcagccacctgagtagccggtactacaggcatgcaccaccacgccaggctaatttttgtatttttagtagagacagggtttcactatattggtcgggttggtctcgaactcctgaccacgtgatccgcctgcctcagcctcccgaagtgctgggattacaggtgtaagccaccatgccaagccacctttaccatttttaagtgtaaagtctagtggtcataaatacat i chlSab2.chr6 I 3 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 487071 1 + 796479 T s panTro4.chr19 59662823 1 + 63644993 T i panTro4.chr19 T 18641 C 0 s ponAbe2.chr19 56637109 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47716595 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395791 1 + 50890351 t i chlSab2.chr6 C 0 I 25 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17044 0 - 21488 C e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=1531.000000 s hg38.chr19_GL949753v2_alt 487072 13 + 796479 tataaatatatat s panTro4.chr19 59662824 13 + 63644993 TTtatatgtatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637110 13 + 60714840 tataTATATATAt i ponAbe2.chr19 C 0 I 10 s papAnu2.chr19 47716596 4 + 51301725 --------tata- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17044 0 - 21488 C e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=1168.000000 s hg38.chr19_GL949753v2_alt 487085 18 + 796479 atatatatatatgtatgt s panTro4.chr19 59662837 18 + 63644993 atatatatatatTTTTTT i panTro4.chr19 C 0 I 62547 s papAnu2.chr19 47716600 13 + 51301725 -tatttatgtgtgt---- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e ponAbe2.chr19 56637123 10 + 60714840 I e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17044 0 - 21488 C e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=147.000000 s hg38.chr19_GL949753v2_alt 487103 28 + 796479 atatatatatacacacacatatatatac s panTro4.chr19 59725402 11 + 63644993 atatatatata----------------- i panTro4.chr19 I 62547 C 0 s papAnu2.chr19 47716613 20 + 51301725 gtgtgtgtatacatatatgt-------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e ponAbe2.chr19 56637123 10 + 60714840 I e calJac3.chr22 45773030 2969 + 49145316 T e nomLeu3.chr10_GL398297_2_random 17044 0 - 21488 C e chlSab2.chr6 47395792 25 + 50890351 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=5498.000000 s hg38.chr19_GL949753v2_alt 487131 61 + 796479 atatatatatgtgtatatatatatatatatatatatatatata--------tatatatatatatatata--- s panTro4.chr19 59725413 47 + 63644993 -------------tatatatatatatatatatatatatatata--------tataCtttttttttttt---- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17044 38 - 21488 ----------------------atacatttgtttgtttgtttg--------tttgtttgtttgtttgt---- i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47716633 55 + 51301725 ----------------gtatatatatgtgtgtgtatatatgtgtatatatatgtgtgtacatatatat-ata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395817 43 + 50890351 ------------------atatatatgtgtgtatatatatgtg--------tgtgtgtgtatatatat-a-- i chlSab2.chr6 I 25 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e ponAbe2.chr19 56637123 10 + 60714840 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=3450.000000 s hg38.chr19_GL949753v2_alt 487192 7 + 796479 tTTTTTT s panTro4.chr19 59725460 7 + 63644993 ttttttt i panTro4.chr19 C 0 T 43975 s ponAbe2.chr19 56637133 7 + 60714840 ttttttt i ponAbe2.chr19 I 10 C 0 s nomLeu3.chr10_GL398297_2_random 17082 6 - 21488 -ttgttt i nomLeu3.chr10_GL398297_2_random C 0 I 1 s papAnu2.chr19 47716688 4 + 51301725 ---tttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395860 3 + 50890351 ----tTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=858299.000000 s hg38.chr19_GL949753v2_alt 487199 723 + 796479 TTTTAccctccacccttttcttcctggcctctggaagccaccattctactctctaccttcatgagatccaccttttagctc-tgtatatgggtgagaaatgggaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagttattcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtcatcttggctcattgcaacctctgcctcctgggttcaaatgattttcctacctcagcctccctagtagctgggattacaggtgcacgccaccatgcctggctactttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgtccgcctcggtctcccaaagtgccgggattacaggcatgatccacctcacccaacctctttttagttctttaaaggacttccacacttt s panTro4.chr19 59681492 724 + 63644993 tttTATcctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggtgagaaatgagaatctttgtaatgacttccagttccatccatgtggctgcaaatatcaggatgttattctttctatggatgagtagtctcctctatgcgaacgtactacattctctctatccattcatccactgatgggcaggtaggttgactccacatcttggctactgtgaacagtgctgcaccaatcatacaagtgcagatatcacttcgatacattgatttactttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttgtttttgtttttgagacagtttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccacctcctgggttcaaatgattttcctgcctcagcctccctagtagctgggattacaggtgtacgccaccatgcctggctactttttggtttttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgtccgccttggtctcccaaagtgccgggattacaggcatgatccaccccatccaacctctttttagttctttaaaggacttccatacttt i panTro4.chr19 T 43975 C 0 s ponAbe2.chr19 56637140 712 + 60714840 ttttAccctccacccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcctgtatatgggggagaaataggaatctttgtaatgacttcgagttccatccatgtggctgcgaatgacaggatgttattctttctatggatgagtagtctccactgtgcgtatgtactacagt-tctctatccattcacccactgatgggcaggtaagttgactccacatcttggctacggtgaacagtgctgcaccaatcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaa------------agtttttcgtttgttgtttttgtttttgtttttgagacactttccctctgtgcccaggctggagtacaagtgatgtgatcttggctcattgcaacctccgcctcctgggttcaaacgattttcctgcctcagcctccttagtagcagggattacaggtgcacacccccatgcctggctactttttcttttttttagtatagatggggtttccccatgttggctgagctgctctcaaactcatgacctcaactgaggtgcccgcctcggtgtcacaaagtgctgggattacaggcatgatccaccgcacccaacctctttttagttatttaaaggacttccatacttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17089 707 - 21488 tttTAccctccacccttttctccctggcctctggtagccaccattctactctctcctttcatgagatccaccttttagctcttgtgtatgggtgagaaatgggaa--------------tccagttccatccatgtgggtgcaaatgacaggatgttattgtttctatggatgagtagtctccactgtgtg--tgtactacattctctctatcca-tcacccactgacgggcaggtaggttgactccacatcttggctactgtgaacagtgctggaacagtcatacgagtgcagatatcacttcgatatattgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttg-ttttctttttatttttgagacagtttccctctgtgcccaggctggagtaaaagtgatgtgatcttggctcattgcagcctccgcctcctgtgttcaaatgattttcctgcctcaccctccctagaagcaggcattacaggtgcacgccaccatccttggctactttttgtattttttagtatagatggggtttccccatgttggctgggctgctctcaaactcatgacctcaactgaggtgcccgcctcggtctcgcaaagtgctgggattacaggcatgatccaccgcgcccaacctctttttagttatttaaaggacttccatgcttt i nomLeu3.chr10_GL398297_2_random I 1 C 0 s papAnu2.chr19 47716692 723 + 51301725 tttaaccctcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatGAGAT-CACCTTTTAGCTCCCGCCTATGGGTGAGAAATGGGAATCTTTGTAATGagctccagttccatccatgtggctgcaaatgTCAGGGTGTTATTGTCTCTATGGATGAGTAGTCTCCACTGTGTGTATGTACTACATTCTCtctatccattcacccactgagGGGCAGGTAGGTTGCCTCCAcgtcttggctactgtgaacagtgctggaCCAATCATACGAGCGCAGATATtacttcaatatactgatttcctttcctttggataaaaacccagtagtgaaattgctAGATACTATGAaagttctctttttagtttttcatttgttgtttttgttttggtttttgagacagtttccctctgtgcccaggttggagttcaagTGATGTGATCttgcctcattgcaacctccaccccctgggttcgaatgattttcctgcctcagcctccctagtagctgggattacaggtgcatgccaccatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatG-CCTCAAGTGAGGTGCCCACCTCagtctcgcaaagtgctgggattacaggtgggagccactgcgcccaatctatttttagttatttaaaggAGTTCCATACTTt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47395863 717 + 50890351 TTTAAccttcctcccttttcttcctggcctctggtagccaccattctactctctaccttcatgagatccaccttttagctcccgcctatgggtgagaaatggaaatgtttgtaatgagctccagttccatccatgtggctgcaaatgtcaggatgttattgtctctatagatgagtagtctccactgtgtgtatgtactacattctctctatccattcacccactgaggggcaggtaggttgtctccacatcttggctactgtgaactgtgctggaccaatcatacgagtgcagatatcacttcgatgtactgatttcctttcctttggatataaacccagtagtgaaattgctggatactatgaaagttctctttttagtttttcgtttgttgtttttgccttggtttttgagaccgtttccctctgtgcccaggctggagttcacgtgatgcgatc--------ttgcaacctccacctcctgggttcaaacgattttcctgcctcagcctccctagtagctgagattacaggtgcatgccactatgcctggctactttttgtactttttagtacagatggggtttccccatgttggccaggctgctctcaaactcatgacctcaagcgaggtgcccgtctcgctctcccaaagtgttgggattacaggcatgagccaccatgcccagcctctttttagtttcttaaagaacttccatacttt i chlSab2.chr6 C 0 I 42340 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=298175.000000 s hg38.chr19_GL949753v2_alt 487922 357 + 796479 tctccgtaaaggctgtactaatttacactcctaccaacagggtattagggttctcctttctctaccactttggcaggatttcctttgcctgtcttgcagctaaaagcc------------------------------attttactttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggtgcgatctcggctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggcacacgccaccacgcccgactaatttttgtatttttagtagagacagtgtttctccatgtgggtcagactggtctcaaactcccgaccttatgagat s panTro4.chr19 59682216 357 + 63644993 tctccgtaatggctgtactaatttacactcctaccaatagggtaccagggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagcc------------------------------attttattttatttcattttattttgagatggagtttcgctcttgtcacccaggctggagtgcagtggcgcgatctcggctcaccgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggcacactccaccacgcccgactaattttcgtatttttagtagagacagcgtttctccatgtgggtcagactggtctcaaactcccgaccttatgagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56637852 387 + 60714840 tctccgtaatggctgtactaatttacactcctaccaacagggtaccagggttctcctttctctacccccttgccagcatttcttttgcctgtcttgcagctaaaagccattttattttattttattttattttattttattttattttattttattttattttgagatggagtttcgctcttgtcacctaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccaggttccagtgattctcctgccccagcctcccgagtagctgggattacaggcacatgcaaccacgcccggctaatttttctatttttggtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 17796 381 - 21488 tctccgtaatggctgtactgatttacactccttccaacagggtaccagggttctcctttctctaccaccttgccagcatttgttttgcctgtcttgcagctaaaagcc-----attttattttattttattttattttattttattttatttta-tttattttaagatggagttttgctcttgtcacccaggctggagtgcagtggcgcgatcttggctcaccgcaacctccatctcccaggttcaagtgattctcctgccttagcctcccaagtagctggaattacaggcacacgccaccacgcgcggctaatttttgtatttttagtagagacagtgtttctccatgtgggtcaggctggtctcaaactcccgacctcaggagat i nomLeu3.chr10_GL398297_2_random C 0 T 15751 s papAnu2.chr19 47717415 381 + 51301725 tctccataatggctgtactaatttacactcctaccaacagggTACCAGGGTTCTCCTTTCTCTACcaccttgccagcatttgttttgCCTGTCTTGCAGCtaaaagcc-----attttattttattttattttattttattttattttattttattttattttgagatggagttgtgctcttgtcacccaggctggagtgcagtggcgcgatctcagctcaccgcaacctccacctcccgggttcaa-tgattctcctgcctcagcctcccaaatagctggaattacaggaatgtgccaccacgcccagcttatttttgcatttttagtagaaacagtgtttctcCACGTGggtcaggcgggtctcaaactcccgacctcaggtgat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=45410.000000 s hg38.chr19_GL949753v2_alt 488279 59 + 796479 tcacccacctcaggctctcaaagatctaggatgacagacgtgagccaccacgcccggcc s panTro4.chr19 59682573 59 + 63644993 tcgcccacctcgggctctcaaagttctaggatgacagacgtgagccacctcgcccggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638239 59 + 60714840 tcgcccacctcaggctctcaaagttctaggatgatagaggtgagccaccacgctcggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2426 58 - 21488 ttgcccacctc-ggctctcaaagatctaggatgacagatgtgagccaccacgcccggcc i nomLeu3.chr10_GL398297_2_random T 15751 C 0 s papAnu2.chr19 47717796 59 + 51301725 tcacccacctcaggctctcaaagtgctaggatgatagacgtgagccaccacccccagcc i papAnu2.chr19 C 0 I 31734 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=52524.000000 s hg38.chr19_GL949753v2_alt 488338 102 + 796479 taaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgatactgagcagtttttcgtatgtggggaaat s panTro4.chr19 59682632 102 + 63644993 taaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcgtttctctgatgatgagtgacactgagcactttttcgtatgccaggaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638298 102 + 60714840 taaaagccattttaatggggtgagatgaaaactcacttcgattttcatttgcatttctctgatgatgagtgatactgagcacttcttcatatgcggggaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2484 102 - 21488 taaaagccattttaatggggtgagatgaaaactcactttgattttaatttgcatttctctgatgatgagtgatactgagcactttttcatatgcagggaaat i nomLeu3.chr10_GL398297_2_random C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47396580 42340 + 50890351 I e papAnu2.chr19 47717855 31734 + 51301725 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=261858.000000 s hg38.chr19_GL949753v2_alt 488440 327 + 796479 ttcatgtcttttgctcctgtttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccatctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatttttagcggtgcagaagttgcttagcttgaggtaatcccaatggtcta-tttttgcttcgattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcaggccttagactcacatc s panTro4.chr19 59682734 327 + 63644993 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatttttagcggtgcagaagttgcttagtttgaggtaatcccaatggtcta-tttttgcttggattacttgtgttttgaaggtttaaaacaaaatgtcttccttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcacaggttcaggccttagactcacatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638400 328 + 60714840 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttgtttgagcttcttatatttctagttattaatcccgtctcagatgcatagtttgcacatatttactcccaatgtgtgccttgtctcttcacgttgttggtt-tatctttagtggcgcagaagttgcttagtttgatgtaatcccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaagtgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacgtgtttcataggttcagcccttagactcacatc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2586 328 - 21488 ttcatgtcttttgctcctttttcaattaaatcatttgttttattgagttctttgagcttcttatatttctagttattaatcttgtctcagatgcatagtttgcatgtatttgctcccaatctgtgggttgtctcttcactttgttggtt-tatctttagcagtgcagaagttgcttagtttgatgtaaccccaatggtctattttttgctttgattacttgtgttttgaaggtttaaaacaaaatgtctttcttcagacaaatgtcctggagcatttccccaatattttcttctacatgtctcataggttcaggccttagactcacatc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47438920 329 + 50890351 ttcatgtcttttgctcattttttagttaaattctttgttttattgagttatgtgagcttcttatatttctagttataaatcccgtctcagatgcatagtttgcaattattggctcccattctgtgggttgtctcttcactttgttggttatttgttttgcagtgcagaagctgcttagtttgatataatccctgtggtctgttttttgctttgattacttgtgtttttgaagtattaaacaaaatgtcttttctcagacaaatgtcctgaagcatttccctaatatttccttctacaaatttcataggttcaggacttagactcatgta i chlSab2.chr6 I 42340 I 14905 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47717855 31734 + 51301725 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=36733.000000 s hg38.chr19_GL949753v2_alt 488767 49 + 796479 tttaatccattttcatttga-tttttgtgtatggtgacaggtagaggtgc s panTro4.chr19 59683061 49 + 63644993 tttaatctactttcatttga-tttttgtctgtggtgacaggtagcggtgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638728 49 + 60714840 tttaatccattttcatttga-tttttgtgtatggtgacaggtagaggtgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2914 50 - 21488 tttaatccattttcatttgattttttgtgtatggtgacaggtagaggtgc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47454154 50 + 50890351 tttaatccattttgatttcactttttgtgaatggtgagaggtagaggtgc i chlSab2.chr6 I 14905 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47717855 31734 + 51301725 I e macFas5.chr19 55642219 7990 + 59248254 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=470376.000000 s hg38.chr19_GL949753v2_alt 488816 410 + 796479 agtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcatggtgactgacacctgcaatttcagcactttgggagcccaaggcgggtggatcacctgaggccaggagttcaagattagtctggccgacgtgatgaaacattgtctccactaaaaatatataaattagctgagcatggtggtcagcacctataataccactactcaggagtttgaggccagagaattgattgaacccaggaggctgtggtggcagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactccatctcaaaagaaaaaagaaaaaaa s panTro4.chr19 59683110 410 + 63644993 agtttcattcctctgcatgtagatgtccaggtttccctgcactgtttattgaaaagactgtcctttcctgattgtgagttcttggcacctttgtcaaagtccattggatgggctgggcatggtggctaacacctgcaacttcagcactttgggaggccaaggcgggtggatcacctgaggccaggagtacaagattagtctggccgatgtgatgaaacatcgtctccactaaaaatataaaaaatagctgagcatggtggtcagcacctgtaataccactactcaggagtttgaggcaagagaattgattgaactcaggaggctgaggttgcagtgaaccgagattgcacctctgcattccagcctgggtgacagagtgagactccatctcaaaagaaaaaataaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56638777 410 + 60714840 agtttcattcttctgcatgtagatgtgcaggtttccctgcactgttgattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccagtggatgggctgggcatggtggctaacacctgcaattgcagcactttgggagaccgaggcaggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacatcgtctctactaaaaatacaaaaattagctgagcatggtggtcagcccctgtaataccactactcaagggtttgaggtgagaaaattgattgaacccaggaggctgaggttgcagtgaaccgagattgcaactctgcactccagcctgggtgacagagtgagactccatctcaaaagaaaaaataaaaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 2964 410 - 21488 agtttcattcctatgcatgtagatatccagttttccccgcactgtttattgaaaagactgtcctttcctgattgtaagttcttggcacctttgtcaaagtccattggatgggctgggcatggtggctaacacctgcaattccagcactttgggaggccgaggcgggtggatcacctgaggccaggagttcaagatcagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaattagctgagcatggtggtcagcacctgtaataccactactcgggagtttgaggcgagagaattgattgaacccaggaggctgagtttacagtgaaccgagattgcacctctgcactccagcctgggtgacagagcgagactctatctcaaaagaaaaaataaaaaac i nomLeu3.chr10_GL398297_2_random C 0 C 0 s macFas5.chr19 55650209 409 + 59248254 agtttcattcc-ctgcatgcagataacccgttttccccgcatcgattattgaaaagactgtcgtttcctgattgtcggttcttgacacttttgtcaaaatgcattggattggctgggaatggtggctcacacctgcagtcccagcactttcagaggccaaggtgggtggatcacctgagaccaggagttccaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtcataccactactcaagagtctgaggcaagagaattgcttgaattcaggagacagaggttactgtgagccgagattgcacctctgcaccccagcctggttaacagagcaagattccatctcaaaaaaaaaaaaaagaaaa i macFas5.chr19 I 7990 I 10 s chlSab2.chr6 47454204 409 + 50890351 aatttcattcc-ctgcatgtaggtaaccagttttccccacatcgtttattgaaaagtctgtcctttcctgattgtacgttcttggcacctttgtcaaaatgcattggattggctgggcatggtggctcacacctgcaatcccagcacattcagaggccaaggtgggtagatcacctgagaccaggagttcgaggcccgcctggccaacatagtaaaaccctgtctccactaaaagtacaaaaattagctgagcatggtggtcagctcctgtaatatcactactcaagagtctgaggcaagagaattgcttgaattcaggaggcggaggttgcagtgagtcaagaatgcacctctgcactccagtctgggtgacagagcaagattccatctcaaaacaaaacaaaaaaaaa i chlSab2.chr6 C 0 I 5 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47717855 31734 + 51301725 I e rheMac3.chr19 60526641 3513 + 64156825 I a score=1405843.000000 s hg38.chr19_GL949753v2_alt 489226 896 + 796479 cattggatgtaaatgcatggattatatttgtgttgttcattctgctccattgttctatgtgcctttcttcatgccaacatcatgctgtcttgcttactacagctctgtaacatattttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAATGGGCGTCACATACAAAAATTATGGAAAAAAGGATCCCAGGACTCCCAGGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCTAAAACCGGTGAGTACAGAA-CCCTCTTATATCCGCTTTTGGAAACCTGGGGAGGTAGAAACCTTCGATGCAGGCATTGACTCAGCATCTCGCAGCTC--TGACATTGTACGCCTGTCTTCTAC--CATCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACCTAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG-GAAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAATTACTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAACAGCCTTGCCGTAACAGAGAACGGAGCTCATGCACGC-----ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT s panTro4.chr19 59683520 895 + 63644993 -attggatgtaaatgcatagattatatctgtgttcttcattctgctccgttgttctatgtgcctttctttatgccaacatcatgctgttttgcttactacagctctgtaacatatcttgagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCGTCACATACAAAACTTATGGAAAAAAGGATCCCAGGACTCCCAGGGTCCAACATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCACTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTCTCCTGTCTCATGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGGA-CCCTCTTATATCCACTTTTGGAACCCTGGGAAGGTGGAAACCTTGGATTGAGGCGTTGACTCAGCATCTCACAGCTC--TGACATTGTACGCCTGTCTTCTAC--CATCTCCGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTCATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAG-GAAAAATGCAATGTTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGACTTGAGAGAGGGAAGGGAAGGGAACATCTGATGAGGGCGAGCTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATAAAGCAACCCAGGCTGACTCAGCAGAGCAAGAGCCTTGCCATAACAGAGAACAGAGCTCATGCACGC-----ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56639187 897 + 60714840 cattggatgttaatgcatggattatatctgtgtacttcattctgctccattgttctatgtgcctttctttatgccaacgtcgtgctgttttgcttactacagctctggaatgtatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGTGTCACATATAAAAATTATGGGAAAAAGGATCCCAGGACTCCCAGAGCCCAATATCAGATAACACAGTGTTGGCCATGAACCTACCTCAAAGATTTCCATTGAGTAGAGGACAGACACCCTCATTTCCTCACCTCTGTCCTGTCTCGTGTTCTAGGAAACCCTTCAAATAGTTGGCCTTCACCCACGAAACCAAGCTCCAAAATCGGTGAGTACAGAA-CCCTCTTATATCTGCCTTTGGAAACCTGGGGAGGTGGAAACCTTGGATTCAGGCATTGATTCAGCATCTCACAGCTC--TGACATTGTGCACCTGTCTTCCAC--CATCTCCGAACTCCAGATACTCCAACAGCGCAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTAATTTGATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGAAAAAAATGCAATATTTGTTCTGCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAGAGCGGGAAGGGAAGGGAACATCTGATGAGGGCGAGGTGTTT-TAGAGAAGTGCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCCGCAGAGCAAGAGCCTTGCCATAACAGAGAACAGAGCTCATGCACGC-----ACACTTCGACTCACTGACTCATTCAGCCACGGCCCCATGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 3374 897 - 21488 cattagatgtaaatgcgtggattatatctgtgttattcattctgctccattgttctatgtgcctttctttatgccaatgtcatgctgttttgcttactacagctctgtaacatatttttagatcaggtagtgtgatgctcctgttttctctttATACCTTGAAGTCTCAAGACAGTGGGCATCACATATAAAAACTATGGAAAAAAGGATCCCAGGACTCCCCAGGCCCAATATTAGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCATTGAGTAGAGGACAGACACTCTCATTTCCTCACCTCTCTCCTGTCTCGTGTTCTAGGAAACCCTTCAAACAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCGGTGAGTACAGAA-CCCTCTTATATCTGCTTTTGGAAACCTGGGGAGGTGGAAGCCTTGGATGCAGGCGTTGACTCAGCATCCCACAGCTC--TGACATCGTGTGCCTGTCTTCAAC--CATCTCTGAACTCCAGATACTCCAACAGCGAAAGGGATCTGGGCCCAACACAGGGCTCAGTGAAATCTCTTAATCTCTCATTTTATGGAGCTGAGACCTCCTACAAGCTAGAAGAATGATTGCCAATCTGACATCCTTCTCAGGAAAAAATGCAGTGTTTGTTCTGCCTTCATTCCAAACTGGAGGATAAATTCCTGAGGGCTTGAGAGAGGGAAGAGAAGGGAACATCTGACGAGGGAGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAAGCAACCCTGGCTGACTCAGCAGAGCAAGAGCCTTGCCGTAACACAGAACAGAGCTCATGCACGT-----ACACTTCGACTCACTGACTCATTCGGCCGCGGCCCCATGTT i nomLeu3.chr10_GL398297_2_random C 0 I 15604 s macFas5.chr19 55650628 883 + 59248254 cattgaatgtagacggatagattatatctgtgttctgcatttcattccattgttctatgcacctttccttatgccaacgtcatgctgttttgtttactacagctctgtaacacatttttaagtcaggtaatgtgatgttcctgttttCTCTCTGTACCGTAAACTCTCAAGACAATGGGCAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGAGCCCAGTGTTGGATAACAGAGTGTTGGCCATGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTCTCCCGTTTC-TATTCTAGGAAACCCTTCACGTAGTTGGCCTTCACCCACTGAACCAAGCTCCAAAACCAGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGgggaggtggaagccttggattcaagccttggctcagcacctcccagctc--tgac--tgtgggcctgtcttccaccatctctctgaactccagacactccaacagcaaaagggatcttggcccagcacagggctccgtaaagtctcttcatctctaattttctgtAGCTGAGACCTCCTACAAGCTGAAAGAATGATTGCAAATCTGACATCCTTCTCAG-GAAAAATGCAG----TGTTCTCCCTGCATTCCTAACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGATGGTGAGGTGTTT-TAGAGAAGTTCCACTTGCCAAGGAATGAACTCCTGTGGGTCATGAGGCAACCCTGGCTGACTCAGCAGAGCCAGAGCCTTGCAGTAA-AGAG--------CCTTGCACGC-----ACACTCCGACTCACTGACTCATTCAGCCATGGCCCCATGCT i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47749589 894 + 51301725 CATTGGATGTAAATAGGTGGATTACATCTGTGTTCTTCATTCTGCTCCATTGTTTTATGTGCTTTTCTTTATGCCAGTGTcatactgttttgtttactacagctctgtaacatatttttaagtcaggtagtgtgatactcCTGTTTTCTCCTTATACCTTAAAGTCTCAAGATAGTGGGCATCACGTACAATGATTATGGAGAAGGGGATGCCAGGACTCCCAGAGCCCAATATTAGATAACAGAATGTTGGCCAGGAACCAACCTCAAAGATGTCCTTTGAGTAGAACACAGGCATCCTTATTTCCACACCTCTCTCCTGTCCCATGTTCTAGGAAACCCTTCAAGTAGTTGGCCTTCACCCACTGAACCAAGCTTCAAAACTGGTAAGTGAAGGATCCCTCTTACCTCTGCTTTTGAAAACCCAGGGAGGTCGAAGCCTTGGATTCAAGCGTTGGCTCAGCACCTCCCAGCTCTGTGAT--TGTGGGcctgtcttcctc--tgtctctgaaCCCCAGACACTCCAACAACGAAAGGGAtctgagcccagcacagagcTCAGTGAAATCTCTTAACCTCTGATTTTCTGCTGCTGAGACCT----CAGGGTAGAAGGATGAGTGCAAATCAGACGTTGTTCTCGG-GATAAATGTGGTGTTTGTTCTGCCTGCATTCCTAACCAAAGGACAAATGCCTGGGGGCTTGAaagggggaaggaaagggaacATTT-TTGAGGGTGGGGTGTTTGTAGAGAAGTTCTACTTGCCAAGGAATGAGCTCCTGTCTGTCATGATCCAACCTTGGTTGACTTAGCAGAGCAAGAGCCTTGCAGTAAGAGAGAACGGAGTTCATCCACGCACATGACACTTCCACTTACTGGC----TCAGGCACTGCTCCATGCT i papAnu2.chr19 I 31734 C 0 s chlSab2.chr6 47454618 895 + 50890351 cgttgaatgtagacgaatagattatatctgtgttcttcatttttctccgttgttctgtgcacttttctttatgccaatgtcatgctgttttgtttactacacctctgtaacatatttttaagtcaggtaatgtgatgTTGCTGTTTTCCCTCTATATCTTAAAGTCTCGAGACAATGGGTAACACATACAAAAATTATGGAGAAGAGGATCCCAGGACTCCCAGATCCCAGTGTTGGATAACAGAGTGTTGGCCGTGAACCAACCTCAAAGATTTCCCTTGAGTAGAGGACAGGCACCCTCATTTCCTCACCTCTGTCCTGCCTC-TATTCTAGGAAACCCTTCAAGTACTTGGCCTTCACCCTCTGAACCAAGCTGCAAAACTGGTGAGTAAAGAATCCCTCTTATCTCTGCTTTTGGAAACCTGGGGAGGTggaagccttggattcaagccttggctcagcacctcccagctc--tgac--tgtgagcctgtcttccaacatctctctgaactccagacactccaacagcaaaaggaatCTGAGCCCGGCACACAGCTCAGTGAAGTCTCTTAATCTCTAATCTTCTGCAGCTGAGACCTCCTACAAGCTGGAAGAATGATTGCAAATCTGACATCCTTCTCAG-GAAAAA-GCAGTGTTTGTTCTCCCTGCATTCCTTACTGGAGGATAAATTCCTGGGGGCTTGAAAGAGGGAAGGGAAGGGAACATCTAATGAGGGTGAGGTGTTT-CAGAGAATTTCCACTTGCCAAGGAATGAGCTCCTGTTGGTCATGAGGCAACCCTGGCTGACTCACCAGAGTAAGAGCCTTGCAGTAACAGAGAACAGAGCTCATGCACGC-----ACACTTTGACTCACTGACTCATTCAGCCATGGCCCCTTGCT i chlSab2.chr6 I 5 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=387720.000000 s hg38.chr19_GL949753v2_alt 490122 263 + 796479 CAGGCTGTGCAGTGCGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaacggtttttt----aattatcttacagtgctgtagctca-aagtaggaagtg---catcttactgggctaaaatcaaggtgacagcaaggctgccttccctctgaggattccaggcaagaatctgc-ttctcacttgtcccagcttctaaaggctccca-gttccttggctcctggtccccttcctccttcctcaaaac s panTro4.chr19 59684415 263 + 63644993 CAGGTTGTGCAGTGTGGAACCTtttcctattgttgccataagaaatttccacaagattcgtgggtgaaaacaaaactgttattt----aattatcttacagtgctgtagctca-aagtatgaagtg---catctcaccgggctaaaatcaaggtgacagcaaggctgccttccctctgagggttccaggcaagaatctgc-ttctcacttgtccctgcttctaaaggctccca-gttccttggctcctgatccccttcctccttcctcaaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640084 264 + 60714840 CAGGCTGTGCAGTGTGGAACCTtttcctattgttgccataacaaatttccacaagattcgtgggtgaaaacaaaatggtttttt----aattatcttaaagtgctgtagctca-aagtatgaagtg---catctcactgggctaaaatcaaggtgacagcaaggctgccttccctctgaagtttccaggcaagaatctgc-atctcacttgtcccagcttctaaaggctcccatgttccctggctcccggtccccttcctccttcctcaaaac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 19875 258 - 21488 CAGGCTGTGCAGTAGGGA--CCtttcctattg-tgccataacaaa-ttccacaagattcatgggtg-aaacaaaacagttattt----aa-tatcttacagtggggtagctca-aagtatgaagtg---catctcactgggctaaaatcaaggtgacagcaaggctgccttcccactgagggttccaggcgagaatctgc-ttctcacttttcccagcttctagaagctcccacattccttggctcctggtccccttcctccttcctcaaagc i nomLeu3.chr10_GL398297_2_random I 15604 C 0 s macFas5.chr19 55651511 262 + 59248254 CAGGCTGTGCAGTTAGAA-TCCttttctattgttgccataacacatttccacaaaattggtggatgaaaacaa-acggcttttt----aattatcttacagtgctgtagctca-aaggatgaaatg---cacctcactgggctaaaatcaaggtgacagcaaggctgccttccctccgaaggttccaggcgagaatctgc-tcttcacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttcctcaaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47750483 265 + 51301725 CAGGCTGTGCAGTGTGGA-CCCTTTTCCTATGTTGCCATAACAAATTTCCACAGGCTTCGTGGATggaagcca-----cattttaaaaaaatatctcaCGGTGCTGTAGCTCAGAATTATGAAATGCGTcatctcactgggctaaaatcaaggtgacATCAAGGCTGCCTTCCCGCTGAAGGTTCCAGGCAAGAATCTTCTTCCTCACTTTTCCAAGCTCCTAGAGGCTCCCACATTCCTTGG--TCTGGTCCCCATCTTCCTTCCTCAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47455513 263 + 50890351 CAGGCTGTGCAGTTAGAA-TCCttttctattgttgccataacaaatttccacaaaattggtggatgaaaacaaaacagcttttt----aattaccttacagtgctgtagctca-aaggatgaaatg---catctcacagagctaaaatcaaggtgacagcaaggctgccttccctctgaaggttccaggcgagaatctgc-tttctacatgtcccagtttctagaggctcccacgttccttggctcctggtccccttcctccttccacaaaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=138072.000000 s hg38.chr19_GL949753v2_alt 490385 125 + 796479 ccacaaagactggtcaca--tctcacatggcatcactcagtgccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttccttatcttttgaaaacttggggattctattgggttc s panTro4.chr19 59684678 125 + 63644993 ccacaaagactggtcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgctctcccttcttactcatcttttgaaaacttggggattctattggtttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640348 125 + 60714840 ccacaaaggctggtcaca--tctcacatggcatcactcagacccttcttcctta-ccacacctctttctctgaatgctgcttacccttcttcctcatcttttgaaaacttggggattctatcgggttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20133 125 - 21488 ccaaaaaggctggtcaca--actcacatggcatcactcagacccttcttcctta-ccacacctctttctcggaatgctgctctcccttcttccccttcttttgaaaacttggggattctattgggttc i nomLeu3.chr10_GL398297_2_random C 0 C 0 s papAnu2.chr19 47750748 127 + 51301725 CCACAAAGGCTGGTCACATCTCTCACATGACATGAGACAGATCATTCTTCCTCA-CCACACCTCTTTCTCTGAATGTTGTTCTgccttcttcctcatcttttaaaGCCCTTGGGATTCTATTGGAATC i papAnu2.chr19 C 0 I 14 s chlSab2.chr6 47455776 126 + 50890351 ccacaaagactggtcacg--tctcacatggcatcactcagacccttcttccttgtccacacctctttctctgaatgttcctctgctttcttcctcatttcttaagggctttgggattttattgggttc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60526641 3513 + 64156825 I a score=647327.000000 s hg38.chr19_GL949753v2_alt 490510 932 + 796479 accaagatgaaaatccctcataatctcctggaaatcatccaggatacccttgttttaagttcagctgattagcaaccgtaattccatctacaatcttcattcctcctttccatgtaaaataacatattcacaaggtatggaggctaggacagggaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCCCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGATCTATAAATGAATGATCCATTGGGAAGCATCTGTGCATGAAATCTAttt-tttgtttgttctt----------------ttgtttattgagacagagttgccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcaacctgcttctcctggattcaagtgattctcctgcctccgcctctcgagtagctgggattacaggcaactgccaccgtgcccggctaattctttttgtatattttttgtagagaggatgtttcaccacgttggccaagcttgtctgaaactcccaacctcaagtgatccgaccgtctcagcatgccaaagtaatgggactacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATGATTTCAGGTGACAAAGAAGGTCTCACTATTCA---GATATTTGTGACATTAATGAAAAACACGGATTGAACCCCTGAAAGATTGGCGGAAGGATTTTGCACACACAGCTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTGGAAGGAAGAGGCTCTTC-CTCAAATGCTGGGAATGATGTGGGGAGAATGACAAGATGACTGTGGAGAGACGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAA s panTro4.chr19 59684803 933 + 63644993 accaagatgaaaatccatcataatctcccggaaatcattcaggatacccttgttttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcctcctttccatgtaaagtaacatattcacaagctatggaggctaggacagggaca-ttttggggtgcgaccgcattctcctgccttccacaAACAGTGAACAAGACGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCACAAGTGGACCAATAAATGAATGATCCATTGGGAAGCATCTGTGCCTGAAATCTAtttgtttgtttgttctt----------------ttgtttattgagacagagtctccctctgtcttccaggctacagtgcagtgtcacgatcttggctcactgcagcctgcacctcctgcattcaagtgattctcctgcctcagcctctcgagtagctgggattataggcaactgccaccatgcctggctaattcattttgtatattttttgtagagaggatgtttcaccatgttggccaagcttgtctgaaactcccaacctcaagtgatccaaccgtctcagcatcccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTgagtgtatgattttgggtgacagagaaggtctcactaatca---gatatttgtgacattaatgaaaaacacgaattgaacccctgaaagattggcggaaggattttccacacacagctgtcagctgtgaaggcagaaagctgaaaacaatctgatgttgaaggaagaggctctgc-ctgaaatgctgggaatgagatggggagaatgacaagacgactgtagggagacagagagcACATTGGGTACACAGGAAACTAAGGAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56640473 930 + 60714840 accaagatgaaaatccaccataatctcccggaaatcatccaggataccctggttttaacttcagctgattagcaaccataattccatctgcaatcttcattcctactttccatgtaaaataacatattcacaagctatggaagctaggacaggaaca-ttttggggtgggacagcattctcctgccttccacaAACAGTGAACAAGATGCATTTGGCCTCTGCTCTTGGGACACTGATATTGCAGATGGTTAAATGGGAGGGCAGAAAATGAATGCGCAAGTGGACCAATAAATGAATGAACCATTTGGAAGCATCTGTGCATGAAATCTA----tttgtttgtttct----------------ttgtttattgagacagagtctccctctgtcttccaggctacagtgtagtgtcacgatctgggctcactgcaacctgcacctcctggattcaagtgattctcctgcctcagtctctcgagtagctgggattacaggcaactgccaccacacccggctaattcttattgtatattttttgtagagaggatgtttcaccatgttgcccaagcttgtctgaaactcccaacctcaagtgatccaaccatctcagcaacccaaagtactgggattacaggcgtgagccactgtgcccagccAGAATTCAAAATCAATAATAGATAATGCTGAGTGTATAATTTTGGGTGACAGAGAAGTTCTCACTAATCA---GATATTTGTGACATTAATGAAAAAGACGAATTGAACCCCTGAAAGATTGGCGGAAGGATTTTCCACACACAGCTGTCAGCCGTGACGGCACAAACGTGAAAACAATCTGATGTTGAAGGAAGAGGTTCTGCATTCAAATGCTGGGAATGAGTTGGGGAGAATGATGAGACGACTGTAGAGAGATGGAGAGCACACTGGGTACACAGGAAACTAAGGAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 20258 938 - 21488 accaagataaaaatccatcataatctcctggaaatcatccaggatacccttattttaagttcagctgattagcaaccgtaattccatctgcaatcttcattcccccttt-catgtaaaataacatattcacaagctatggagatgaggacatggacatttttggggTTGGGTGGCATTCT----TCTTCCACAAATAGTAAACAAGATGCATTTGGCCTCTGTTTTTGGGACACTGCTATTGCGGGTGGTTAAATGGGAGGACAGAAAATGTATGCACAAGTGGACCAATAAACAAATGATCCATTGAGAAGCATCTGTGCATGAAatctatttgtttatttatttgtttacttacttactaacttatttattgagacggagtag-cataaatcatacaggagcgagtgcagtggcatgatctcagttcactgcaacctccacctcataggtggaagtgatt-tcctccatcagcctctccagtagctgggattacagacaacca-cagcatgcctg--ctactctttttgcatagtttctgtagagaggatgtttcaccatgttgtccgggctggtctcaaactcccaatctcaagtgatcaaacagcctctgcctcccaacgcactgggataagaggcatgagccacagggccgagccAAATTTTCAAATCAATAATAGATAATGTTGAGTGTATAATTTTAGGTGACAGAGAGGGTCTCACTAATCA---CATATTTGTGATGTTAATGAAAAAAATGGATTCAACCCATGGAAGACTGGTGGAAGGATTTTC--CACACAACTGTCAGCCGTGAAGGCACAAAGGTGAAAACAATCTGATGTTGAAGGAAGAGGCTCTGC-CTGAAATGCTGGGAATGAGATGGGGAGAATGGCAAGTTGACTGTAGAGAGATGGAGAGCACACTGGGTACATAGGAAACTAAGGAGGAA i nomLeu3.chr10_GL398297_2_random C 0 C 0 s chlSab2.chr6 47455902 935 + 50890351 accaagat---aatctatcatcatctccctaaaatcatccaggataccctcctttccagttcagctgattagtaaccgtaattccatctgcaatcttcgttcttcctctccacgtaaaatcacatattcacaaggtgtgaaggctaggacagggaca-ttttgggggtggggtggattctcctgccttccacaAATAGTAAACAGGATGCATTTGGCCTGTGCTCTTGGGACACTGACGTTGCAGATGGGTAAACGGGAGGAAAGAAAATGAATGCACAAGTGGACCTATAAATGGTTGATCCACTGGGAAACATCGGTGCATGAAattgatttatttatgtatgtat---------taattATGTAtttattaagatggagtctcgctctatcccctaggctgcagtgcagtgtcacgatcttggctcactgtaacctccgcctcctgggttcaagtgattcttctgcctcagcctctcaagcagcttgga-tacaggcacccgccaccacacctggctaattctttttgtagattgttgttagagaccatgtttcaccatg-tggcccagtctatctccaactccctatctaaagtaatccgaccgcctcagcctcccaaagtgctcggattataggcgtgaaccccggcacccagccAGAATTTAAAATAAATAACAGATAATACTGAGTGTATGATTTCAGGTCACAGAGAAGTTCTCACTGATCAAATAATACTTGTGATCTTAATGAAAAAAATAGATC-AACCCCTGGAAGACTGGCGGAAGGATTTTCCACACACAGCAGTCAGCTGTGAAGGCACAAAGGTGACAACAATCTTATGTGGAAGGAAGAGGCTCTGC-CTGAAACACTGGGAATGAGATGGGGAGAATTACAAGACCACTGGAGAGAGA-GAAGAGCACACTGGGCACACAGGAAACTAAGGAGGA- i chlSab2.chr6 C 0 I 6918 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60526641 3513 + 64156825 I a score=194924.000000 s hg38.chr19_GL949753v2_alt 491442 263 + 796479 CAAGGAGTGTGTGTTTGACACTCACAGCCATTGGATTCACCTCGGGG-TAGCCAGGAATCCCTACATGATTAATA-TGACTGACATGAAAATAAGGGAGGCTCAGTTGCATAACTGGAATCTAGGAGACCGTGGAAAAGGCAATTGCCGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAATGAATGAAGTAGATGGATATAAGATAGGTTTGTGAGGTAGAATCATTGACTGGAAAGGCTTGCTGGGTTTGATTTTCC- s panTro4.chr19 59685736 264 + 63644993 CAAGGAGTGTGTGTTTGACACTCGCAGCCATTGGATTCACCTCGGGG-TAACCAGGAATCCCTACATGATTAACAGTGACTGACATGAAAATAAGGGAGGCCCAGGCGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCGCCCCACTGGTGAAATGTGGTGCTGATTTTGACACTAAGTGGATGAAGCAGATGGATATTAGCTATGCTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCC- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641403 264 + 60714840 CAAGGAGTGTGTGTTTGATACTCACAGCCATTGGATTCAACTCAGGG-TAACTAGGAATCCCTACATGATTAATAGTGACTGACATGAAAATAAGAGAGGCCCAGGTGCGTAACTGGAATCTAGGAGAGTGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACACTAAGTGGATGAAGCAGATGTGTATAAGATATGTTTGTGAGGTAGAATCATTGGCTGGAAAGGCTTGCTGGGTTTGATTTTCC- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10_GL398297_2_random 21196 261 - 21488 CAAGGAGTGTGTGTTTTATACT--CAGCCGTTGGACACACCTCGGGGCTAACTGGGAATCCCTACATGATTAATAGTGACTGACATGAAAATCAGGGAGGCCCAGGTGCGTAACTGGAATTTAGGAGACCGTGGAAAAGGCAATTCCTGCCCCACTGGTGAAATGTGGTGCTGATTTAGACATTAAATGAATGAA--AGATGGACACAAGATGTGTTTGTGAGATAGAGTAATTTGCAGGGAGGGCTTGTCTAGTTTGATTTTTC- i nomLeu3.chr10_GL398297_2_random C 0 N 0 s chlSab2.chr6 47463755 265 + 50890351 CAAGGAGTGTGTGTTTTATACTCACAGCCCTTGGATTCACCTCGGGC-TAACTAGGAATCCCTACGTGATTTATAGTGACTGACATGAAAATAAGGGAGGCCCAGGTGCGTAACTGGAATCTAGGAGACTGTGGAAAAGGCAATTCCCACCTCACTGGTGAAATATGTTGCGTATTTAAACACTAAATGAATGAAGTGGATGGATACAAGATGTGTATGTGAGGTAGAATAATTCACAGGGAGGGCTTGCCTGGTTTGATTTTTCC i chlSab2.chr6 I 6918 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60526641 3513 + 64156825 I a score=295120.000000 s hg38.chr19_GL949753v2_alt 491705 681 + 796479 TACTTGTTTAATCCTCGCTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCTATTATAGCATAATATACAAGTCTGTGAAcggtggctcacgcctgtaacccagcactgcaggaggccaaggcgggtggatcacatgaagtcagcagttcgagaccagcctggccaacatggtgaaaccctgtctctaggaaaaacacaaaaattagccgagcatggtggtgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgcagtgagtggaggttgcatcactgcactccagcctgggtggcacaaggagactccgtctcaaaaaataaaaataagaaaTGCATAAATATAAATATAATATAACACACGCAAATGACAAAGGGACCTGAATTCCAATCATGATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATGAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGTCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATCACAAA-A s panTro4.chr19 59686000 676 + 63644993 TAGATGTTTAATCCTCACTTAATTAATTTCTTTCTGAGATTTATTCATCCTACACATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGAGACCTACTATAGCATAATATACAAGTCTGTGAAcggtggctcatgcttgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttccggaccagcctggccaacatggtgaaaccctatctctactaaaaatgcaaaaattagccgagcatggtggtgcatccctgtaaccccagctcctattctggaggatgaagcaggagaatgacttcaacccaggaagtggaggttgcagtgagtggagtttgcatcactgcactccagcctgggtgacacaaggagactccatctcaaaaaataaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAAAGGCACCTGAATTCCCATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCTATCAGCCTAAAACCTCTTCCCTATTTGGCTTTCTGTGAGCATGAGATCACATAGAAAATGTGAAAGCCCGCTGAATCCTCCAGCACAGATCCTGGAATAGAGAAAGTGCTCTGGTCATTGCAAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56641667 675 + 60714840 TAGTTGTTTAATCCTGGCTTAATTAATTTCTTTCTGAGATTTATTCCTCCTACGCATAAATCAATACCTGGCAAAGGAGTGACAGATATATGAGGGGTGGTGGAAATGAAGGGACCTATTATAGCATAATATACAAGTCTGTGAAcggtggctcactcctgtaacccagcactgcaggaggccaaggcgggtggattccatgaagtcaggagttcgagaccagcctggccaacatggggaaaccctatctctactaaaaatacaaaaattagctgagcatggtgatgcatccctgtaatcccagctcctactctggaggatgaagcaggagaatgacttcaacccaggaggtggaggttgtagtgagtagagattgcatcactgcactccagcctgggcgacacacggagactctgtctcaaaaaataaaaataagaaaTGCATAAATATAA------TAAAACACACACGAATGACAAAGGCACCTGAATTCCAATCATCATTTTTCTATTTCTCTATAATTACTTCTTTGATCCTTTATCTTATCCATTAGGCAATCACCCTAAAACCTCTTCCCTATTTGGTTTTCTGTGAGCATGAGATCATATAGAAAATGTGAAAGCCCGCTGAATCCTCCGGCACAGATCCTGGAATAGAGAAAGTGCTCTGTTCATAGCAAA-A i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47464020 669 + 50890351 TAATTGTTCAATCTTCACTTCATTAATTTCTTTCTGAGATTTATTTTTCCTACATGTAAATCAATACCTGGCAGAGGACTGATTGATACATGAGGCGTGGTGCAAAGGAAGAGACTTATTATAATATAACACGCAAGGTTGTGAAcggtggctcacacctgtaacccaacattttgggaggctgaggcggatggatccattgaggtcaggagttcaagaatagcctggacactatgctcaaacccaag-tctactaaataaacaaaaactagctgggtgtggtggcgcatgcctgtaataccag---ctattcgggaggctgaagcaggagaatggcttccacccgcgaggcagaggtttcagtgagccgagatcgc-tcattggactacaccctgggtgacagagtgagactctatctcaaaaaataaaaatacaaaaCACATAAATCTAA------TATAGCATACAGGAATGACAAAGGCACTTCAATCCCAATTATCATTTTTCTGTTTCTCTATAACGACTTCTTTGATCCTTTATCTTATTCATTAGAAAATCAGCCAAAAACGTCTTCCCTATTT-GCTTTCTGTGAGCCTGAGATCATATGGGAAATATGAAAGGCCCCTGAACCCACCAGCACAGGCCCTGGAATAGAGAAAGTTCTCTGTTCATGGCATA-A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47750875 14 + 51301725 I e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60526641 3513 + 64156825 I a score=949133.000000 s hg38.chr19_GL949753v2_alt 492386 1341 + 796479 AAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTACTTCCAATCACCTGTGGAGATTCAGGTAGACCATGGGGAGGTAAACATTAACACTCCTTGGAGTGAGTCCAGATCTTGGAATCAGAGATCAGCGACAGCACTAGCTCCTGCTCCCCTTTCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTT-CCCCCAGCCTCTCGGGTAGAACAGCAGCCTAATATGTGTCTCCCGAGATCACAAAGAGCAGCAGGTTTCACACGGGCTTCAACACTATTTCCTGGCCGTTTGACATAAGAGAATTCTATTTCGCTTTTTTTA-TCTTGATTTCACTTTTGTTTTCTTTCCTTGGAGAATGCAAGTTGTTTGATTCAAGAATGCTGTGGATGTAGAAACCCTAAAGCACATTCGCTGTGAATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGGactgcacctgggcctatgccaattcctatcactcaccgtcactccagggagacagaacacacagagaatacgttacat-aggcaggttcattactaacagataagcagcgagtgacaacagaaacctatatttcaatgtgagccagtccctcaaggctcagaaaagctcctcgggacatatgga-gtcaccccatttgcagtgtagctgcggg-aagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactcagctaaagcactgcatgacgtcctcc---aggaagaacaggaagacagcccagggtgttctgagacgttcctcctgatctcaggaagttgctgtcttaggccatttttgttgctctaaaggaacacttgagcctcggtaacttctaaagaaaagagattggtttgcctcaccgttctgcaggctgtactggaagcatggcaccagcatctatttctcgtgacggcctcaggctgctcccactctggcagaagggaaggagggtctgtctgtgcagagaccacagagatcacacggcaagagagggagcaagggggagggggagtgatggagcttccaagctctttttaacaaccagctctccgg-gaactaatagagggggaacttgctaaccccgtctccttgggacagcattgatgtgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacagtgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtcgtatcctcagcacgttctatggttactatgagagctataactgaa s panTro4.chr19 59686676 1341 + 63644993 AAAACTTGCCCACTCACCCAAATCCCCCACCTCACCCCTAATTCCAATCACCTGTGGATATTCAGATAGGCCATGGGGAGGTAAACA---ATACTCCTTGGTGTGAGTCCAGATCTTGGAATCAGAGATCAGCGCCAGCACTAACTCCTGCTCCCCTTCCCTACTAATTCACAGGAGGACAGGTGGTATTGAAGCAATAGATGGCCGAGGGGGTGGTCCTT-CCCCCAGCCTCTCGGGTAGAACAGCAGCCTAACATGTGTCTCCCAAGATCACAAAGAGTAGCACGTTGCACACGGGCTTCAACACTATTTCCTGGACGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTAATCTTGATGTCACTTTTGTTTCCTTTTCTTGGAGAATACAAGTTGTTTGACTCAAGAAAGCTGTGGATGTAGAAATCCTAAAGCACATTCGCTGTGTATCAATCCCAGTGCAGCTTTCCCAGAGAAGACTCTAAACACCTCCTGGACTGCACCTGGGCCTATGCCAATTCCTGTCACTCACCGTCACTC-AGGgagacagaacacacagagaacacattacac-aggcaggttcattactaacagataagcagcgagtgacaacagaaacctacatttcaatgtgagccagtcc-tcaaggctcagaaaagctgctcgggacatatggaagtcatcccatttgcagtgtagctggggggaagccagaaagcagcccagcctgggttttgtaccctggagccacaggaagccctcagctaaagcactgcatgacgtcctcctccaggaagaacaggaagacagcccaggctgttctgagacattcctcctgatctcaggacgttgctgtcttagtccatttttgttgctctaaaggaacacttgagcctgggtaacttctaaagaaaagagattgctttgcctcaccgttctgcaggctgtactggaagcacggcaccagcagctatttcttgtgatggcctcaggctgctcccattctgacagaagggaaggagggtctgtctgtgcagagaccacagagattacacatcaagagagggagcaagggg-agggggagcaatggagcttccaagctctttttaacaaccaggtctccag-gaaataatagagggggaacttgctaaccccgtctccttgggacagcattgatctgttcatgatggatccacctccatgacccaaacacctctcaagaggcccaacctcccacactgggggtgaaatttcaatgtgaggtttgaaggggtcaaacatctcaactaaagtagtagtatcctcagcacgttctatggttactatgagagctataactgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56642342 1342 + 60714840 AAAAATTGTGCTCTCACCCAAACCCCCCACCTCAGCCCTACTTCCAATCACCTGTGGAGATTCAGATAGACCATGGGGAGGTAAACATTAATACTCCTTGGAGTGAGTCCAGATCTTGAAATCAGAGATCAGCGCCAGCACTAGCTCCTGCTCCCCTTTCATACTAATTCACAGGAGGACAGGTGGTATTGAAGCAGTAGATGGTGGAGGGGGCGGTCCTT-CCCCCAGCCTCTCGGGTGGAACAGCAGCCTAACATGTGTCTCCTGAGATCACAAAGAGTAGCACGTTTCACACGGGCTTCAACACTATATCCTGGCTGTTTGACATAAGAGAATTCTACTTCGCTTTTTTTA-TCTTGATTTCACGTTTGTTTCCTTTTCTTGGAGAATGCAAGTTGTTTCACTCAAGAATACTGTGGATGTAGAAATCCTAAAGCACATTCGCTATATATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCGCCTGGGCCTATGCCAATTCCTATCACTCACCGTCACTCAAGGgagacagaacacacagagaatacattacat-aggcaggttcattactaacagataagcagtgagtgacaagagaagcctacatttcaatgtgagccagtccctgaaggctcagaaaagctgctccggagatatgga-gtcatcccatttgcagggtagctggggg-aagccagaaagcagcccagcctgggtgttctaccctggagccacaggaagcactcagctaaagcactgcatgacatcctcctctaggaaaaacaggaagacagcccaggctcttctgggacattcctcctgatctcaggatgttgctgtcttagtccatttttgttgctataaaggaacacttgagcctgggtaacttctaaagaaaagagatttgtttgcctcacagttctgcaggctgcactggaagcatggcaccagcatctatttcctgtgacggcctcaggctgctcccactctggcagaaggggaggagggtctgtctgtgc--agaccacacagatcacacggcaagagagggagtaagtgggagggggagcgatggagcttccaagctctttttaacaaccagctctccag-gaactaacagagggggaacttgctaaccccgtctccttggaacagcattgatctgttcatgatggatccacctccatcacccaaacacctcccaagaggcccaacctcccacactgggagttaaatttcaatgtgaggtttgaaggggtcaaacatctaaactaaagtagttgcatcctcagcacattctatggttactatgagagctataactgag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47750889 1330 + 51301725 AAAACTTGCCCCCTCACCCAAATCCCCCACCTCACCTCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGGTAAAAACTAATATTCTTTG----GAGTTCAGATCTTGGACTCAGAGACCAGCATCAGCACCATCTCCTGGTCACCTTTTATACGAATTCACAGAAGGACAGGTTGTACCAAGGCAATAGATGATGGAGGGGGTTGTCCTT-CCTCCGGACTCTCAGGTAGAACAGCAGCCTAATATAGGACTCCCGAGATCACAAAAAGGAGCCCGCTCTTCACGAGCTTCATCATTATTTCCTGGCTGTTTGATATATTTCAGTTCTACTTCACTGTTTTGA-TCTTGATTTCACTTT--ATGCCTTTTCTTGCCAAAAATAATGTGTTTGAGTCAAGAGGGTTGTGGCCGTAGAAATTGTAAAGCACATTCACTGAGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTACTGCACCTGGGGCTATGCCAGTTTCTATCACTCACGGTCACTCCAGGGAGACAAAACACACAGACAATACATGACATAAGGTGGGTTCATTACTAATACATAAGCAGCAACTGACAACAGAAGCCTACATTTCAATGTGAGCCAGTCCCCCAAGGCTCAGAAAAGCTGCTCGGGACATATGGA-GTCACCCCATTTGCACTGCAGCTGGGAG-AACCCAGAAAGCAGCCCGGCCTGGGTTTTGTACCCTGGAGCCACAGGAAGCACTGAGCTAAAGCACTGCATGGCGTCCTCCTCTGGCACGAACAGGAAGACAGTCCA-GCCGTTCTGGGACATTCCTCCTGATCTCAGGACGttgctgtcttagtccatttttgaGGATGTGAAAGAACATTTGAGCCTGGGTAACTTCTACAGAAAACAGATTTGGTTGGTTCACGGTTCTGCAAAGTGTACAAGAGGCAGGACACCAGCATCTATTTCTGGCTGCGGCCTCAGGCTGCTCCTACTCTGGTAGAAGAGAAGG-GGGCTTCCATGTGCAGAGACCACCGAGAGCACACGGCAAGACAGGGAAAA------ACGGGGTGTGATGGAGCTTCCAAGCTCTTTTTAAGAACCGAGTCTCCAGAGTACTAATAAAGGGAGAAT-TGCTAACCCTGTCG-TGTGGGGGAACATTAATCTATTTATGatggatccacccccatgacccaaacacctcccaataGGCACCACCTCCCACACTCAGGGTTAAATTTCAGAGTGAAGTTTCGGGGGGTCAAATATCCATACGATAGCAGGTGTCTCATCCGCACATTCTGTAGTTATTACGAAAACTATAACTGAG i papAnu2.chr19 I 14 C 0 s chlSab2.chr6 47464689 1329 + 50890351 --AACTTGCCCCCTCAGCCAAATCCCCCACCTCACGCCTACTTCCTATCACATTAAGAGACACAGATAGACCGTGGGAAGATAAAAACTAACATTCTTTG----GAGGTCAGACCTTGGACTCAGAGACCAGTGCCAGCACCATCTCCTGGTCACCTTTTGTACGAATTCACAGAAGGACAGGTTGTACCGAAGCAATAGATGATGGAGGGGGTTGTCCTTGCCCCCGGACTCTCAGGTAGAACAGCAGCCTAATATATGACTCCCGAGATCAC-AAAAGTAGCACGTTCTTCACAAGCTTCATCATTATTTCCTGGCTGTTTGATATATGACAGTTCTACTTCACTGTTTTGA-TCTTGATTTCACGTT--ATTCCTTTTCTTGCTGAATGTAATGCGTTTGAGTCAAGTGGGTTGTGGCTGTAGAAATTGTAAGGCACATTCACTGTGTATCAATCCCAGTCCAGTCTTCCCAGAGAAGACTCTAAACACCTCCTGTactgcacctggggctatgccagcttctatccctcaccgtcactccagggagacagaacacacagagaatacatcacgtaaggtgggttcgttactaacagataaccagtaagtgacaacagaagcctgcatttcagtgtgagccagtcccccaaggctcagaaaagctgctcgggacatatgga-gtcactccatttgcactgcagctgaggg-aacccagaaagcagcccagcctgggttttgtaccctggagccacaggaagcactgagctaaagcactgcatgacgtcctcctctgggacgaacaggaagacagccca-gctgttctgggactttcctcctgatctcaggatgttgctgtcttagtccatttttgtggctgtaaaagaacacttgagcctgggtaacttctacagaaaagagaattggtcgactcacggttctgcaagctgtactagaggcaggacatcagcatctatttctggctgcggcctcaggctgctcctactctggtagaagagaagg-gggcctacatgtgcagagaccaccgagatcacacggcaagacagggagaa------acggggtgtgatggagcttccaagctctttttaagaaccaactctccagagtactaatagagggagaacgtgctaaccctgtcg-tgtggggcagcattaatctattcatgatggatccacccccatcacccaaatacctcctgataagaccaacttcccacactcagggttaaatttcaaagtgaaacttcggggggtcaaatatccatacgatagcaggtgtctcatcggcacattctgtggttattatgaaaactataactgag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55651773 0 + 59248254 C e rheMac3.chr19 60526641 3513 + 64156825 I a score=69112.000000 s hg38.chr19_GL949753v2_alt 493727 61 + 796479 aaagcaggagaaagctgggtctcctgccatctgggtgcttgtcctAAAGAGATGTTTTATG s panTro4.chr19 59688017 61 + 63644993 aaagcaggagaaagctgggtcTCCCTCCATCTGGGTGCTTGTCCTAAAGGGGTGTTGCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643684 61 + 60714840 aaagcaggagaaagctaggtctcccgccatctgggtgcttgtcctAAAGAGACGTTGTATG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55651773 61 + 59248254 agagcaggagaaAGCTGGGTCTCCCGCCATCAGGCCGCTTGTCCTAAGGAGACATTCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47752219 61 + 51301725 AAAGCAGGAGAAAGCTGGGTCTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATG i papAnu2.chr19 C 0 I 6649 s chlSab2.chr6 47466018 61 + 50890351 aaaccaggagaaagctgggtcTCCCACCACGTGGGTGCTTGTCCTAAAGAGATGTTTTATG i chlSab2.chr6 C 0 I 11050 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=680389.000000 s hg38.chr19_GL949753v2_alt 493788 558 + 796479 TGGTTACCTGTCAATCAAGAAATGCGAGACAATTCATAAAGAGGAACTGCTAAGATTAGCTTCTTATTGGTGTCTCATCTTCTTCCAGGTAACCCCCGACACCTGCACATTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctc---ttctttctcctTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAGAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAGCACTCAGGTGTGTGTTCCTCACAAACAGGATGGTCCCTGGCCCAAGGCAGCAGCCACAGAGGCAGGACTTTCTAGAGAGGGCACCAGACTCCCTGCCCCTGCCTTCAACTCACAGACCGTTGCCTGATTCTGAACTGTATCCTCATGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGCC s panTro4.chr19 59688078 561 + 63644993 TGGTTACCTGTCAATCAAGAAATGTGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCCTCTTCTTCCAGGTAACTCCAGACACCTGCACGTTCTGATTGGGACCTCAGTGGtcatcatcctcttcatcctcctcctcttctttctccttcATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGAGGCCAGAAAGCTCAGGGCCATGTGGGGAAGCAGGATGGGAACACTCAGGTGTGTGTTCCTCACAGGTAGGATGGTCCCTGGCCCAAGGCAGGAGCCACAGAGGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCACGTCCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATAGAATGTCTGAGTCT-GCTGTTGGCAACTGAGGGACCTCAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56643745 561 + 60714840 TGGTTACCTGTCAATCAACAAATGCGAGACAATTCATAAAGAGGAACTGCTATGATTAGCTTCTTATTGGTGTCTCGTCTTCTTCCAGGTAACCCCAGACACCTGCACGTTCTGATTGGGATCTCAGTGGTCATCATCCCCTTTGCCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAAAGTAAGTCTCACGAAGCAGGGGCCAGAGAGCTCAGGGCCGTGTGGGGAAGCAAGATTGGAGCACGCGGGTGTGTGTTCCTCACTGGCAGGAAGGTCTCTGGCCCAAGGCAGGAGCCTCAGAAGCAGGACTTTCTAGAGAGAGCACCAGACACCCTGCCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCACATTCCCTGCAGCCACTCACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGGAACTCAGAGCTATTCATGGGATGGGTCCTTGAGCTCAGAGAGATTGAGTGTCTGAGTCT-GCTGTTGGCAAGTGAGGGACCTCAGGC i ponAbe2.chr19 C 0 T 16397 s macFas5.chr19 55651834 558 + 59248254 TGGTTACCTGTCAATCAAGAAATGAGAGACAATCCATAAGAAGGAAATGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCCTCCAGGTAACCCCAGACACCTGCATGTTCTGATTGGGACCTCAGTGGCCATGATCCTCTTCACCATCTTC---TTCTTTCTCCTGCATCGCTGGTGCTCCAACAAAAAGAGTAAGTCTCACGAAGCAGAGGCCACAGACCTCAGGGCCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTTCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGAGGCAGAGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGATAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAGGGGTCTTGAACTCAGAGAAACAGAATGTCTGAGCCTCGCTGTTGGCAGCTGAAGCACCTGAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47758929 558 + 51301725 TGGTTACCTGTCAATCAAGAAACGAGAGACAATCCATAAGAAGGAACTGCTATGATTAGCTTCTTATTCGTGTCTCTTCTTCCTCCAGGTATCCCCGGACACCTGCATGTTCTGATTGGGACCTCAGTGGTCATGATCCCCTTCAccatcttc---ttctttctcctgcatCGCTGGTGCTCCAACAAAAAGAGTAAGTCTTACGAAGCAGAGGCCACAGACCTCAGGGCTGAGTGGGGAAGCGGGATGGGAGCACACAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCaggagccacagaggcagagctttcTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTCAACTATATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTGGGAGACAGAATCAATGGGATGGAAATTGAGAGCCATTCATGGGAAAGAGTCTTGAACTCAGAGAGATAGACTGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGC i papAnu2.chr19 I 6649 C 0 s chlSab2.chr6 47477129 558 + 50890351 TGGTTACCTGTCAATCAAGAATTGAGAGACAATCCATGAAAAGGAACTGCTATGATTAGCTTCTTATTGGAGTCTCTTCTTCATCCAGGTAACCCCAGACACCTGCATGTTGTGATTGGGACCTCAGTGGTCATGATCCTCTTCACCATCTTC---TTCTTTCTCCTGCATCGCTGGTGCTCCCACAAAAAGAGTAAGTCTCACGAAGCAAAGGCCACAGACCTCAGGGTCGTGTGGGGAAGCGGGATGGGAGCACGCAGGTGTGTGTTCCTCACCGGCAGGATGGTCTCTGGCCCAAGGCAGGAGCCACAGATGCAGGGCTTTCTAGAGAGAGCACCAGACACCCTGTCCCTGCCTTCAGCTCACAGACCATTGCCTGATTCTGAACTGTATCCTCATGT-CCCTGCAGCCACTGACATCCAGGAGAAGGTTCCATGACAGGCAGAAAGTAGGAAGCAGAATCACTGGGATGCCAATTGAGAGCCATTTATGGGAAGGGGTCTTGAACTCAGAGAGACAGAATGTCTGAGTCTGGCTGTTGGCAGCTGAGGGACCTCAGGC i chlSab2.chr6 I 11050 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=32537.000000 s hg38.chr19_GL949753v2_alt 494346 35 + 796479 ACCTATGGTCTCCCCCTGTATGTTGGTATCTGCTT s panTro4.chr19 59688639 35 + 63644993 ACCTATGGTCTCCCCCTGTATGTTGGTATCTGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56627909 35 + 60714840 ACCTACGGCCTCCCCCTGTTTGTTGGTATCTGCTT i ponAbe2.chr19 T 16397 I 16362 s macFas5.chr19 55652392 34 + 59248254 GTCTACGGCCT-CCCCTGTGTGTTGGGCTCTGCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47759487 35 + 51301725 ACCTACAGTCTCCCCCTGTGCGTTGGGCTCTGCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47477687 34 + 50890351 ACCTACGGCCT-CCCCTGTGTGTTGGACTCTGCAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=197398.000000 s hg38.chr19_GL949753v2_alt 494381 178 + 796479 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCCGTCTCCTACAGATGCTGCGGTAATGGACCAAGAGTCTGCAGGGAACAGAACAGCGAATAGCGAGGTAGGTACTCCTCGGCCCGGGCTCGTGGCTACTG--TTATTCCCAAAGAGTCCTGGAAAATGTGAGC-A s panTro4.chr19 59688674 178 + 63644993 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTGTTGACTTCTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGTAGGTGCTCCTCGGCCCAGCCTCGTGGCTAGTG--TTATTCCCAAAGAGTCCTGGAAAACGTGAGC-A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644306 178 + 60714840 ATGAAATGAGGACCCAGAAGTGCCCTCCGAGCTGTTTTCTTGACTTCCGTCTCCTACAGATGCTGCTGTCATGGACCAAGAGCCTGCAGGGAACACAACAGTGAAGAGGGAGGTAGGTGCTCCTTGGCCCAGCCTCATGGCTAGTC--TTATTCCCAAAGAGTCCTGAAAAATGTGAGC-A i ponAbe2.chr19 I 16362 C 0 s macFas5.chr19 55652426 180 + 59248254 ATGAAATGAGGACCCAGAAGTGCCCTCCCAGCTGTTTTGATGCCTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGTCCAGCCTCATGGATCGAATCTTATTCCCTACTAGTCCTGAAGAATGTGAGCC- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47759522 179 + 51301725 ATGAAATGAGGACCCAGACGTGCCCTCCCAGCTGTTTTGATGACTTTTGTCTCCTACAGATGCTGCTGTAATGGACCAAGAGCCTGCTGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTCGGCCCAGACTCGTAGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAGC-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47477721 179 + 50890351 ATGAAATGAGGACCCAGACGTGCCCTCCCAGCTCCTTTGATGACTTTTGTCTCCTCCAGATGCTGCTGTAATGGACCAAGAGCCTGCGGGGGACAGAACAGTGAACAGGGAGGTAGGTCCTCCTTGGCCCAACCTCGTGGATACTGCTTTATTCCCTAATAGTCCTGAAGAATGTGAGC-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T e rheMac3.chr19 60526641 3513 + 64156825 I a score=33636.000000 s hg38.chr19_GL949753v2_alt 494559 19 + 796479 CCCTCCCTCACTCAGCATT s panTro4.chr19 59688852 19 + 63644993 CCCTCCCTCACTCAGCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644484 19 + 60714840 CCCTCCCTCACTCAGCATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60530154 19 + 64156825 CCCTCCCTCACTCAACATT i rheMac3.chr19 I 3513 C 0 s macFas5.chr19 55652606 19 + 59248254 CCCTCCCTCACTCAACATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47759701 18 + 51301725 CCCTCCCTCACTCAACA-T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47477900 19 + 50890351 CCCTCCCTCACTCAACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958238 37065 + 122678785 T e calJac3.chr22 45773030 2969 + 49145316 T a score=265188.000000 s hg38.chr19_GL949753v2_alt 494578 126 + 796479 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACACACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGA s panTro4.chr19 59688871 126 + 63644993 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATATGCACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCTTTCTCAGAGGCCCAAGACACCCCCAACAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644503 126 + 60714840 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60530173 126 + 64156825 TCCCTCTCTC-CAGGACTCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACCGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652625 126 + 59248254 TCCCTCTCTC-CAGGACCCTGATGAACAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTTGCCCTTCTCAGAGGCCCAGGAGACCCCCAACAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47759719 126 + 51301725 TCCCTCTCTC-CAGGACTCTGAAGAAGAAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGA i papAnu2.chr19 C 0 I 338 s chlSab2.chr6 47477919 126 + 50890351 TCCCTCTCTC-CAGGACTCTGATGAACCAGACCCTCAGGAGGTGACATACGCACAGTTGGATCACTGCGTTCTCACACAGGGAAAAATCACTCGCCCTTCTCAGAGGCCCAAGACACCCCCAACAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921173 127 + 122678785 TCTCTCTCTCTCAGACCCCTACTGCAGGAGGCCCCCAGGACGTGACATATGCTCAGCTGGACCACCACATCCTCACACAGAGGACAGCTCCAGCCACATCCCCACAGTCTGTGGAGCCCATGGCTGA i canFam3.chr1 T 37065 C 0 e calJac3.chr22 45773030 2969 + 49145316 T a score=82551.000000 s hg38.chr19_GL949753v2_alt 494704 44 + 796479 TATCATCGTGTACACGGAACTT-CCAAATGCTGAGTCCAGATCCA s panTro4.chr19 59688997 44 + 63644993 CACCAGCGTGTACACGGAACTT-CCAAATGCTGAGCCCAGATCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644629 44 + 60714840 TACCATCGTGTACACGGAACTT-CCAAATGCTGAGCCCAGATCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60530299 44 + 64156825 TACCAGCGTGTACACGGAACTT-CCAAATGCTGAGCCCAGATCGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652751 44 + 59248254 TACCAGCGTGTACACGGAACTT-CCAAATGCTGAGCCCAGATCGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47760183 44 + 51301725 TACCAGCGTGTACACGGAGCTT-CCAAATGCTGAGCCCAGATCGA i papAnu2.chr19 I 338 C 0 s chlSab2.chr6 47478045 44 + 50890351 TACCAGCGTGTACACGGAACTT-CCAAATGCAGAATCCAGATCGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102921300 45 + 122678785 GTCCAGTACATATGCAGCCCTTGCCAGACACTGACTCCATGCCCA i canFam3.chr1 C 0 I 36357 e calJac3.chr22 45773030 2969 + 49145316 T a score=1973422.000000 s hg38.chr19_GL949753v2_alt 494748 1205 + 796479 AAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGAGGGCGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACAAATCTGAATGTGCCTCTCACTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGGAGAAAAAACACACTCCTTTGCTTAGCCCACAGTTCTCCATTTCacttgacccctgcccacctctccaacctaactggcttacttcctagt-ctacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgttgttccaccttccctcatgctgttccacctcccctcagactagctttcagtcttctgtcagcagtaaaacttatatat--------------------------------------------tttttaaaataacttcaatgtagttttccatccttcaaataaacatgtctgcccccatgg-tttcggtaatgggactcttttcttgcctaaggcttccggtgttatcagtaccatgtccatataatcccatctgttccccactgagttctcatccccggactctgagtttctggaagcagggtggagcctca-tttgtctctgagactccaatttccatccaaagatgtagcacataggaggTTCCAAGGATCACGAATCATATGAACAAGTGATACTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACAATGAAACATTTGTAGAATCATAGGCCTTGTTAGTCTCAT---CTCCATGGGGACACATATCAACACATCATCTTTCATaatataaatatacggtcactcctccatatctgcggggtttacaggtgtttattgaaccaagtataaatcaaaaatattgagagaaagtatccacagagtttcaaaaagcataactatgttgaatggacacaaatgaagctgtgtgtaggctgtatcaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcataggttatttgcaaactctgtgccatttcatataagaggcttgagcatctacagattttggtatctgagtggagatctcaaaaccaatcacccacgaatagtgaaggatgaccgtatatgacttttatttct s panTro4.chr19 59689041 1205 + 63644993 AAGTTGTCTCCTGCCCATGAGCACCACAGTCAGGCCTTGATGGGGTCCTCTAGGGAGACAACAGCCCTGTCTCAAAACTGGGTTGCCAGCTCCCATGTACCAGCAGCTGGAATCTGAAGGCATGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACcacgaatctgaacatgcctctctcttgcttacaaatgtctaaggtccccactgcctgctgcagagaaaacacactcctttgcttagcccacaattctccatttcacttgacccctgcccacctctccaacctaactggcttacttcctagt-ccacttgaggctgcaatcacactgaggaactcacaattccaaacatacaagaggctccctcttaacgcagcacttagacacgtgctgttccaccttccctcatgctgttccacctcccctcagactagctTTCAGCCTTCTGTCAGCAGTAAAACttatatatata-----------------------------------------ttttttaaat---ttCAATGTAGTTTTCCCTCCTTGAAATAAACATGTCTGCCCTCATGG-TTTCGGTAATGGGACTCTTTTCTTGCCTAAGGCTTCCGGTGTTATCATTACTATGTCCATATAATCCCATCTGTTCTCCACCGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTCATTTTGTCTCTGGGACTCCAATTTCCATCCAAAGATGTAGCACATAGGAGGTTCCAAGGATCGCGAATCACATGAACAAGTGATATTCTTACTCTCTGCA-ACCTGGAAAGCTGGCAGAGTCATTCCAGGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCATGGGGACACATATCAACATATCATCTTTCATACTATAAATATAcggtcactcctctgtatctgtggggtttacaggtctttattgaaccaagtataaatcaaaaatattcagagaaaatatccacagagtttcaaaaagcataactatgttgaatggacacaaatgaagctgtgtgtaggctgtattaggaattataagtaatctagagatgatttcatgtatacaggaggatgtgcatatgttatttgcaaactgtgttccatttcatataagaggcttgagcatctacagattttggtatctgagtggagatctcgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56644673 1246 + 60714840 AAGTTGTCTCCTGCCCGTGAGCACCACAGTCTGGCCTTGAAGGGGTCCTCTAGGGAGACAACAGCCCTGTGTCAAAACCAGCTTGCCAGCTCCCATGTACCGGCAGCTGGAATCTGAAGGCATCAGTCTTCATCTTAGGGCATTGCTCTTCCTCACACcacaaatct---cgtgcctctctgttgcttacaaatgtctatagttcccactgcctgctggagagaaaacacactcctttgcttagttcacaattctctatttcacgtgacccctggccacctctccagcctaactggcttacttcctagt-ctacttgaggctgcggtcacactgaggaactcacagttccaaacatacaagaggctcgctcttaacaaggcacttacgcacgtgctgttccaccttccctcatgctgttccacctttcctcagacaatctttcagccttctgtcatcagttaaatTAATAAATTTATAAATTTTCCAGCCTTCCATCATCAGTGGAACTTATAAAATTTTTTGTGAT---TTCAATGTAGCTGTCTCCTCTTCAAATAAATATGTCTGCCCTCATTGCTTTAGGTAATATGACACTGTATTGGCTGAAAGAAACTGGTGTTATCATTACCATGTCCATATAACCCCATCTGTTCTCCACTGGGTtctcacccctggactctgagcttctggaagcagggtggagcctga-tttgtctgtgggactccaatttccatctaaagatgcagcacataggaggtTCCAAAGATCGTGAATCGCATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGTCATTCCACGATGAAACATTTGCAGAGTCATAGGTCTTGTTAGTCTCATCTCCTCCACAGGGACACATATCAACACATCATCTTTCATACTATAAATATAcagtcactcctctgtatctgtggggtttacaagtgtttattgaaccaactataaatcaaaaatattcagagaatatatccacaaaatttcaaaaagcaaaactatgttgagtggacacaaatgaagcggtgtgtaggctgtatcaagaattataagtcatctacagatgatgtaatgtatacaggagtatgtgcatgggttatatccaaatgctgtgtcattttatgtaagaggcttgagcatctgcagattttggt-tctgagtggagatcctgaaaccaatcacccacgaatagtgaaggatgactgTATATGACTTTTATTTCT i ponAbe2.chr19 C 0 I 308 s rheMac3.chr19 60530343 1202 + 64156825 AAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGCCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTCGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctgccCCCAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAATT-------------------------------------------TTTTTATCAT---TTCAACGTAGCTCTCTCCTCTTCAAATAAACACCTCTACCCTCATCC-TTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACTATGTCCATATAGCCCCATATGTTCTCCAATGGTTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAGAGTGGAGCCTGG-TTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgctgtaccattttatgtaagaggcttgagcacctgcaggttttggtgtcagagcagagatcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55652795 1201 + 59248254 AAGTTGTCTTCTATCCATGAGCACCACCGTCAGGCCTTGAAGGGGTCTGCTAGGGAGACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTGCCAGCAGCAGGAATCTGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACATGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctactggaggctgtgatcacactgaggaactcacaattccaaacatacaagagactccctgttaacacagcacttagacacgtgctgttccatcttccctcatgctgttccacctcccctcAGACTATCTTTCAGCCCT-TGGCAGCAGTGAAACTTATAAATT-------------------------------------------TTTTTATCAT---TTCAATGTAGCTCTCTCCTCTTCAAATAAACACGTCTGCCCTCATCC-TTTAGGTAATGTGACTCTTTATTGGCCGAAAGTTTCTGGTGTTATCGTTACTATGTCCGTATAGCCCCGTATGTTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGA-TTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACATTTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCACAGGGACACATGTCAACACATCATCCTTCATACTATAAATACAcagtcgctcctccgtatctgaggggtttacaggtgtttattgagccaactataaatcaaaaatattcagagaaaaaatccacaaagttccaaaaagcaaaactatgttgaatggacacaaacggaatggtgtgtaggctgtatccggaattataagtaatctagagatgatttcatgtacacaggaggatgagcatgggttatatgcaaacgctgtaccattttatgtaagaggcttgagcacctgcaggttttggtgtcagagcagagatcctgaaaccaatcacccgcgaatagtgaaggatgactgTATATAATTTTTATTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47760227 1201 + 51301725 AAGTTGTCTTCTATCCATGAGCACCACAGTCAGGCCTTGAAGGGGTCTTCTAGGGAGACAACAGTCCTGTCTCAAAACCGGCTTCACAGCTCCAATGTACCAGCAGCTGGAATCTGAAGGTGTGAGTCTGCATCTTAGGACATCGCTCTTCCTCACAGCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAAGGTCCCCACTGCCTGCTGCAGGGAAAACACACTCCTTTGCTTAGCCCACAATTCTCCATTTCACTTGacccctgcccacctctccaaCCT-ACTGGCTTACTTCCTAGTCCTACTGGAGGCTGCAGTCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTCCCTCTTAACACGGCACTTAGACACATGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCCCTCAGATTATCTTTCAGCCTTCTGTCAGCAGTGaaacttataaatt-------------------------------------------tttttatcat---ttcaatgtAGCTCTCTCCTCTTCAAATAAACACCTCTGCCCTCATCT-TTTAGGTAATGTGACTCTTTATTCGCTGAAAGTTTCTGGTGTTATCATTACCATGTCCATGTAGCCCCATATGTTCTCCGCTGGGTTCTCACCCCTGGACTCTGAGCTTCTGTAGGCAA-GTGGAGCCTGA-TTTCTGTCTGGAACTCCAATTTCCATCCAACGATGCAGCGCATAGGAGGTTGCAAGGATCGTGAATCAGATGAACGAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCATTCCAAGATGAAACACCTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCACGGGGACACATGTCCACACATCAT-CTTCATACTATAAATACACAGTCGCTCCTCCAGATCTGTGGGGTTTACAGGTGTTTGTTGAGCCAACtataaatcaaaaatattcagagaaaaaatccacaaaatttcaaaaagcaaaactatgttGAATGGACACAAATGCAATGGTGTGTAGGCTGTGTCAggaattataagtaatctagagatgatttcatGTATACAGGAGGATGAGCATGGATTATATGCAAACCCTGTGCCATTTTATGTAAGAGGCTTGAGCACCTGCAGATTGTGGTATCTGAGCCGAGATCCTGATACCAATCACCCACGAATAGTGAAGGACGATTgtatctcacttttattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47478089 1200 + 50890351 AAGTTGTCTTCTATCCATGAGCACCACCATCAGGCCTTGCAGGGGTCTTCTATGGAGACAACAGCCCTGTCTCAAAACCGGCTTGACAGCTCCAATGTACCAGCAGCAGGAATCCGAAGGTGTGAGTCTGCATCTTAGGGCATCGCTCTTCCTCACACCACGAATCTGAACGTGCCTCTCTCTTGCTTACAAATGTCTAACGTCCCCACTGCCTGCTGCAGAGAAAACCCACTCCTTTGCTTAGCCCACAATTCTCCActtcacttgacccctgcccacctctccaacct-actggcttacttcctagtcctgctggaggctgcagtcacactgaggaactcagaattccaaacatacaagaggctccctcttaacagagcacttagacacgtgctgttccaccttccctcatgttgttccacctcccctcAGACTATCTTTCAGCCCT-TGTCAGCAGTGAAACTTATAAATT-------------------------------------------TTTTTATCAT---TTCAACGTAGCTCTCTCCTCTTCAAATAAACACATCTGCCCTCATCC-TTTAGGTAATGTGACTCTTTATTCGCCGAAAGTTTCCGGTGTTATCATTACTATGTCCGTATAGCCCCATATGCTCTCCACTGGGTTCTCACCCCTGGACTCTGAGCTTCTGGAAGCAG-GTGGAGCCTGA-TTTGTCTCTGGGACTCCAATTTCCATCCAACGATGCAGCACATAGGAGGTTGCAAGGATCGTGAATGAGATGAACAAGTGATATTCTTACTCTCTGCAGACCTGGAAAGCTGGCAGAGCCCTTCCAAGATGAAACATCTGTAGAGTCATAGGCCTTGTTAGTCTCAT---CTCCACGGGGACACATGTCCACACATCAT-CTTCATACCATAAATACAcagtcgctcctccagacctgtggggtttacaggtgtttattgaaccaactataaaccaaaaatattcagggaaaaaatccacaaagttccaaaaagcaaaactacgttgaatggacacaaatggaatggtatgtaggctgtgtcaggaattataagtaatctagagatgatttcatgtagacaggaggatgaggatggattatatgcaaacgctgtgccattttatgtaagaggcttgagcatctgcagattgtggtatctgagcggagatcctgaaaccaatcacccacgaatagtgaagtacgactgTATCTCACTTTTATTTCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T a score=409954.000000 s hg38.chr19_GL949753v2_alt 495953 291 + 796479 caaatttaaatataaatcataaaAAATGTAC---AACTAGATAAAA-ACTAAGAAGTGTTTTtatagtgtgag-------ttagatttattttttcctaggtgtaaccaattggtttaatattatttattgagaagacattctatgccaccttaaaccacacggcagcctttgtcaactctaaagggactgtgtgtacatggatgtattttagacactg-tttctgctaaggggctctctgtgtccacactcttgatgatgctgcactttatgtagccttatagaaccctttaa-atttagtag s panTro4.chr19 59690246 291 + 63644993 CAAATTTAAATATAAATCATAAAAAATGTAC---AACTAGATAAAA-ACTAAGAAGTGTTTTtatagtgtgag-------ttagatttattttttcctaggtgtaacccattggtttaatattatttattgtgaagacattctatgccaccttaaaccacacagcagcctttgtcaactaaaaagggactgtgtgtacgcggatgtactttagacactg-tttctgctaaggggctctctgtgtccacactcttgaggatgctgcactttatgtagccttataaaaccctttaa-atttagtag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646227 302 + 60714840 caaatttaaatataCATCATAAAAAATGTACAATAACTAGATAAAA-ACTAAGAAGTGTTTTtatagtgtgagaataactttagatttattttttcctatgtgtaaccctttggtttaatgttatttattgagaagacgttctatgccaccttagaccacacggcagcctttgtcaaccataaagggactgtgtgtacacggatgtattttagacactgttttctgctaaggggttgtctgtgtccacactcttgaggatgctgcactttatgtagccttatagaaccctttaa-atttagtag i ponAbe2.chr19 I 308 C 0 s rheMac3.chr19 60531545 301 + 64156825 GAATTTTAGAAATAAATCCT-CAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAGCTtagatttattttttcctacgtgtaaccctctggtccaatgttatttatggagaagacattcttttccaccttaacccacatggcagcctctgtcaactataaagggactgtgtgtacacggatgtatttt--acactctttcctgcttagtggttctctgtgtccactctcacgaggatgctgcaccttatgtagccttagagaaccccttaacatttggtag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55653996 301 + 59248254 GAATTTTAGAAATAAATCCT-CAAAATGCACAATAATAAGATAAAACAATAAGCAGTGTTTTTACAGTGTGAAAATAAGCTTAGATTTATTTTTTCCTACGTGTAACCCTCTGGTCCAATGTTATTTATGGAGAAGACATTCTTTTCCACCTTAACCCACATGGCAGCCTCTGTCAACTATAAAGGGACTGTGTGTACACGGATGTATTTT--ACACTCTTTCCTGCTTAGTGGCTCTCTGTGTCCACTCTCACGAGGATGCTGCACCTTATGTAGCCTTAGAGAACCCCTTAACATTTGGTAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47761428 301 + 51301725 caattttaaatataaatcataaaaaattTACAACAACAAGATTAAA-AACAAGAAGTG-TTTTATAGTGTGAGAATAcgtgtagatttatttttttctgtgcgtAACCCT-TGGGCCCGTGTTATCTATGGAGAAGACATTCTATTCCTCCTTAAACCACACGGCAGCCTCTGTCAACTCTAACGGGACTGTGTGTGCACGGATGTATTTTAGACACTGTTTTCCGATAAGGGGCTCTCTGTGTTCGCTCTCTTGAGGATGCTGCACATTCCGTAGGCTTATACAAACCCTTAAAGTTTGGTAG i papAnu2.chr19 C 0 M 902 s chlSab2.chr6 47479289 301 + 50890351 CAATTTTAAATATAAATCAAAAAAAATTTACAACAACAAGATAAAA-AACAAGAAGTG-TTTtatagtgtgagaatacgtatagatttatttttttctatgcgtaacact-tgggcccatgttatctatggagaagacattctattcctccttaaaccacacggcagcctttgtcaactctaacgggactgtgtgtgcacggatgtattttagacactgttttccgataaggggctctctgtgttcactctcttgaggatgctgcacattacgtaggcttacacaaccccttaaaatttggtag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T a score=18697.000000 s hg38.chr19_GL949753v2_alt 496244 17 + 796479 ccagagccctctaattt s panTro4.chr19 59690537 17 + 63644993 ccagagccctctaattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646529 17 + 60714840 ccagagccctctaattt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60531846 17 + 64156825 cctgaatcctctaattt i rheMac3.chr19 C 0 T 7409 s macFas5.chr19 55654297 17 + 59248254 CCTGAATCCTCTAATTT i macFas5.chr19 C 0 I 28 s chlSab2.chr6 47479590 17 + 50890351 ctggagtcctctagttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47761729 902 + 51301725 M a score=10321.000000 s hg38.chr19_GL949753v2_alt 496261 23 + 796479 gttattATAGGCTGTTTGC-------tttt s panTro4.chr19 59690554 26 + 63644993 gttattATAGGCTACTTGCTAt----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56646546 24 + 60714840 gttattATAGGCTATTTGC--T----Attt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55654342 23 + 59248254 ATTATTATAGGTTATTTGC--T----TTT- i macFas5.chr19 I 28 T 12136 s chlSab2.chr6 47479607 27 + 50890351 cttattataggctatttgc--tacgcttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47761729 902 + 51301725 M e rheMac3.chr19 60531863 7409 + 64156825 T a score=297825.000000 s hg38.chr19_GL949753v2_alt 496284 698 + 796479 ------tttttcttgaggcggagtcttgctctgtcgcccaggctggactgcagtgacacaatctcagctcactgcaacctccgcctcccaggttcaagcgattctcgtgcctcagcctcttgagcagctggcgttacaggtgcctgccaccaggcacggctaatttttggatttttaacagagacacggtttcactatattggccaagctgctctcaaactccttatctcagttgatccgcccacctcggcttcccaacgtgctgggGAAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAAC-gagggagggagagagacagacagagagCAAACTCCA-GAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATTAAACTACAAAACTCCAGAATTTACAGG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAGCTGGTTCTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTAATGGTTTATTAGTCACAATGACTCCGAAAACATTAATAATACCTATTAGATACTTTGCATATTACACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAAAAAAAATACATGAAAAGTCTTTCATGTTAGCACAGATTTTAGGCATCTC s panTro4.chr19 59690580 697 + 63644993 ------tttttcttgaggcggagtcttgctctgtcgcccaggctggactgtagtggtgcaatctcagctcactgcaacctccgcctcccatgttcaagcgattctcgtgcctcagcctcttgagtagctggcatttcaggtgcctgccaccaggctcggctaatttttggatttttagcagagacacggtttcactgtgttggccaggctgctctcaatctcctcatctcagttcatccgcccacctcggcttcccaacgtgctgggG-AAACTTGATTTTCTATAGCATTATGTTCCTGGATATTTCTGTAAAATTTAAAAT-GAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAACTCCAGAATTTACATG-TGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCATGAACAATTCTAATGGTTTATTAGTCACAATGTCTCTGAAAACACTAATAATACCTATTAGATATTTTGCATATTTCACAGGAAGAAGAGTTTGAATCTCAGATAAAAACAATAAAAATACATGAAAAGTCTTTCATGTTAGCACAGATTTTAGTCATCTC i panTro4.chr19 C 0 I 43933 s ponAbe2.chr19 56646570 651 + 60714840 ------tttttcttgaggtggagtcttgctctgtcgcccaggctggactgcactggcgcagtctcagctcactgcaacctccgccttccaggttcaggtgattctcgcgtctcagcctcttgagtagctgacattacaggtgtgtgccacgaggcatggctaatttttgagtttttagcagagacacggtttcactatgttggccaggctgctctcaaactcctcatctcagttgatccgcccacctcggcttcccaacgtgcggggGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAAAGGAGGGAGGGAGAGAGACAGAGAGAGAGCAAACTCCA-GAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTTTAGATAAAACTACAAAAATCCAGAATTTACATGTTGTGGTTTTTGCTGATAAAGTACAATTCTAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAACTTAAATCACTTTAACTGGTTCTGCTGTAATACTAGAAATACAAGCATGAAAAATTCTCATGGTTTATTAGTCACAATTACTCTGAAAACCTTAATAATACCTATTAGATATTTTGCATATTACACAGGAAGAAGAGTTTGCATCTCAGATAAAAACAA------------------------------------------------- i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47479634 655 + 50890351 tttatatatttcttcaggcagagtctcgctctgtcacccaggctggactgcagtggcacaatctcggttcactgcaacttccgcctctcaggttcaagcgattctcctgcctcagcctcttgagtagctggcattacaggtgcccgccaccaggcatggctaatttttgtatgtttagcagagacatggcttcactaggttggccagggaggtctcgaactcccgacctctattgatccgtccacctcagcttcccaaagtgctgggggacacttgattttctataGCATTGTGTTACTGGATATTTCCATACAATTTAAAAT-gagggaggcagagagacagagagagagagcgaACCATGAGTTGGGGCTCTGGACTCTCAAGTCATGAGACAAATTGTAGATAAAACGACAAAAATCCAGAATTGACATGTTGTGGGTTTTGCTGATAAAGAACAGTTCTAAGACTGTAAATAATTGCATAATCCTTCCCTGGGTATTTAAATCATTTAAACTGGTTCTGCTGTCATACTAGAAATACAAGCATGAAACATCCTAATGGTTTATTCATCACAATTGCCCTGACAACGTTCATAATACCTATTAGATATTTTGCATATTACACACGAAGAAGAGTTTGAAACACAGATAAAAAC--------------------------------------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47761729 902 + 51301725 M e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=-110.000000 s hg38.chr19_GL949753v2_alt 496982 8 + 796479 GTGTTCGG s chlSab2.chr6 47480289 1 + 50890351 -------G i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e ponAbe2.chr19 56647221 0 + 60714840 C e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47761729 902 + 51301725 M e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T e panTro4.chr19 59691277 43933 + 63644993 I a score=3093.000000 s hg38.chr19_GL949753v2_alt 496990 7 + 796479 ATAAAAA s panTro4.chr19 59735210 7 + 63644993 ATAAAAA i panTro4.chr19 I 43933 C 0 s ponAbe2.chr19 56647221 6 + 60714840 -TAAAAA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47480290 7 + 50890351 ACAAAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e papAnu2.chr19 47761729 902 + 51301725 M e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=36295.000000 s hg38.chr19_GL949753v2_alt 496997 43 + 796479 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTT s panTro4.chr19 59735217 43 + 63644993 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTC i panTro4.chr19 C 0 T 43983 s ponAbe2.chr19 56647227 43 + 60714840 TACATGAAAAGTCTTTCACGTTAGCACAGATTTTAGGCATCTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47762631 43 + 51301725 TACATGAAAAATCTTTCACGTCAGCACAGATTTTAGTCACCTC i papAnu2.chr19 M 902 C 0 s chlSab2.chr6 47480297 43 + 50890351 TACATGAAAAGTCTTTCACGTCAGCACAGACTTTAGTCACCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=309649.000000 s hg38.chr19_GL949753v2_alt 497040 379 + 796479 GTGTTCGGGAGGTTGGATCTGAGACGTGTTGTGAGTTGGTCATAGTGAAGGACGTGAGGTGCC-AATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCAAGCATCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTAGTCAACATGTAAGCTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCTGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGTGAGTCCTGGAAAGGAATAGAGGGAGGGAGCGCGGGGATGGAGATCTGGGCCCAGAGGTGGAGATATAGGCCTGG s panTro4.chr19 59691277 380 + 63644993 ATGTTTGGGAGGTTGGATCTGAGACGTGTTTTGAGTTGGTCATAGTGAAGGACGCGAGGTGTCAAATTCTAGTGAGAACAATTTCCAGGAAGCCGTGTTCCGCTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGTGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCGCTCATGGTCGTCAGCATGGTGTGTGTTGGTGAGTCCTTGAAGGGAATCGAGGGAGGGAGCGCTGGGGTGGAGGTCTGGACCTGGAGGTAAAGATATGGGCCTAG i panTro4.chr19 T 43983 C 0 s ponAbe2.chr19 56647270 379 + 60714840 GTGTTCGGGAGGTTGGATCCGAGACGTGTTTTGAGATGGTCATAGTGAAGGACGCGAGGTGTG-AATTCTAGTGAGAACAATTTCCAGGAAGCCATGTTCCGTTCTTGAGCGAGCACCCACTGGGCCTCATGCAAGGTAGAAAGAGCCTGCGTATGTCAGCCTCCCATGATGTGGTCAGCATGTAAACTGCATGGGCAGGGCGCCAAATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCACAGCCGCCTGTCTGCACAGAGAGCACCATGTCGCTCATGGTCGTCAGCATGGTGTGTGTTGGTGAGTCCTGGAAAGGAATAGAGGGAGGGAGTGCAGGGATGGAGATCTGGGCTCAGAGGTGGAGATATGGGTCTGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47762674 378 + 51301725 ATGTCCGGGAGGTTGGATCTGAGACGTGTTTTGAGCTGGTCATAGTGAAGGACGCAAGGTGTC-AGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCACTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCTGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCCCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACCGGCAGCACCATGTCACTCATGGTCGTCAGCCTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATCGACGGAGGAAGCGCTGGggtggagatctgggcctggagg-ggagatCTGGACCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480340 378 + 50890351 GTGTCCGGGAGGTTGGATCTGAGATGTGTTTTGAGCTGGTCATAGTGAAGGACGCAAGGTGTC-AGTTCTAGTGAGAACAATTTCCAGGAAGCCATTTTCCCCTCTTGAGTGAGCACCCGCTGCACCTCATGCAAGGTAGGAAGAGCCAGCGTACGTCACCCTCCCATGATGTGGTCAGCACGTCAACTGCATGGGCAGGGCGCCAGATAACATCCTGTGCGCTGCTGAGCTGAGCTGGGGCGCGGCCGCCTGTCTGCACTGGCAGCACCATGTCGCTCATGGTCGTCAGCGTGGCGTGTGTTGGTGAGTCCCGGAAGGGAATTGGCGGAGGAAGCGCTGGGGTGGAGATCTGGGCCTGGAGT-GGGGATATGGGCCTGG i chlSab2.chr6 C 0 I 134 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=1146.000000 s hg38.chr19_GL949753v2_alt 497419 2 + 796479 AG s panTro4.chr19 59691657 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647649 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763052 2 + 51301725 AG i papAnu2.chr19 C 0 I 19 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47480718 134 + 50890351 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=39296.000000 s hg38.chr19_GL949753v2_alt 497421 58 + 796479 GTGGAGTTATGGGCCTGGAGTGGAGATCTGGGCCTGGAGTGGATATATGGGCCTGGAG s panTro4.chr19 59691659 58 + 63644993 GTGGAGTTATGGTCCTGGAGTGGAGATCTGGGTCTGGAGTGGATTTATGGGCCTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647651 58 + 60714840 GTGGAGTTATGGGCCTGGAGTGGAGATAGGAACCTGGATGGGAGATAGGAGCCTGGAG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763073 58 + 51301725 gtggagatatgatCCTGGAGTGTagatctgggcctggagtggagatctgggcctggag i papAnu2.chr19 I 19 I 13 s chlSab2.chr6 47480852 58 + 50890351 GTGGAGATATGGGCCTGGGCTGGAGATCTGGGCCTGGAGTGGAGATAGGATCCTGGAG i chlSab2.chr6 I 134 I 18 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=3078.000000 s hg38.chr19_GL949753v2_alt 497479 20 + 796479 -----ATGGAGTGATGGGCCTAGAA s panTro4.chr19 59691717 20 + 63644993 -----ATGGAGTGATGGGCCTAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56647709 18 + 60714840 ------TGGAGATATGGGCCT-GGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763144 24 + 51301725 GTGGAGTGCAGATATGGGtctgga- i papAnu2.chr19 I 13 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47480910 18 + 50890351 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=116229.000000 s hg38.chr19_GL949753v2_alt 497499 232 + 796479 GTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAGGTGGAGATATGGGCCTGGA-GTGGAGATCTGGGC-------------------------------CTGGAGTGGAGATAGGAACCTGGAGGGGAGATATGAGCCTGGAGTGAAGATATTGGCCTGG-GATGGAGATATGGGCCTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGGAGGTGGAGACATGGGCCTAGAGGT--------------------------------------GGATATCTGGGCCTGGA s panTro4.chr19 59691737 212 + 63644993 GTGGAGATCTGGGTCTGGAGTGGAGATATGGGCCTGGAGGTAGAGATATGGGCCTGGA-GTGGAGATCTGGGC-------------------------------CTGGAGTGGAGATAGGAACCTGGAGGGGAGATAGGAGCCTGGAGTGGAGACATGGGCCTGGAGGTGGAGATATGGGCCTGTAGTAGAGTTATGGGCCAGGA---------------------GTGGAGATATGGGCCTAGAGGT--------------------------------------GGATATCtgggcctgga i panTro4.chr19 C 0 I 43978 s ponAbe2.chr19 56647727 213 + 60714840 GTGGAGTTACGGGCCTGCAGTAGAGATGCGGGCCTGGAGGTGGAGATATGGGCCTAGAGGTGGATATCTGGGC-------------------------------CTGCAGT-------------------GGAGATATGGGCCTGGGATGGAGATATGGGCCTAGAGGTGGAGTTACAGGCCTGCAGTAGAGATATGGGCCTGGAGGTGGAGATCTGTGCCTGGA-GTGGAGATATGGGCCTGGA-TT--------------------------------------GGAGATATGGGCCTGGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763168 297 + 51301725 gtggagatatgggcctggggtggagatatgggcctggagg-GAAGATATGAACCTAGA-GGGGAGATATGGGTTTGGAGTGGAGCCTGGAGAGCAGATTTGAGCCTGGAGaggagatatgggcctggggtggagataGGAGCCTGGAGGGGAGATATGGGTTTGG-AGCAGAAACATGGGCCTGGGGAGGAGATCCGGGCCTGGA-GTGGACTTAGGAGTCTGGA-GTGGAGATATGGTCCTGGG-GTGGAGATAGGATCCTGCAGTGGAGATATGAGCATGGAGAGGAGATATGGGCCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47480928 228 + 50890351 GTAGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGAGT-GGAGACATGGGTCTGGA-GTGGAGATATGGTT-------------------------------CTGGAGAGGAGATATGAGCCTGGAGAGGAGATATGAGCCTGGGGTGGAGATATGGGTCTGG-AGTGCAGATATGGGCCTGGAGTGGAGATATGGGTCTGGA-GAAGAGATATGAGCCTGGA-GAGGAGATATGGGCCTGGG-GT--------------------------------------TGAGATATGGGTCTGGA i chlSab2.chr6 I 18 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=24723.000000 s hg38.chr19_GL949753v2_alt 497731 38 + 796479 GTGGACATATGGGCCTAGGATGGAGATATGGGCCTGGG s panTro4.chr19 59735927 38 + 63644993 TTGGCGATATGGGCCTGGATTGGCGATATGGGCCTAGG i panTro4.chr19 I 43978 T 44016 s ponAbe2.chr19 56647940 38 + 60714840 GTGGAGATATGGGCCAAGGGTGGAGATCTGAGCCTGGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763465 38 + 51301725 GTGGAGATAAGGGCatggagtggagatatgggcctggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481156 38 + 50890351 GTGGAGATATGGGCCTGGAGTGGAGATATGGGTCTGGA i chlSab2.chr6 C 0 I 95 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=273.000000 s hg38.chr19_GL949753v2_alt 497769 1 + 796479 T s ponAbe2.chr19 56647978 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763503 1 + 51301725 t i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e chlSab2.chr6 47481194 95 + 50890351 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T e panTro4.chr19 59735965 44016 + 63644993 T a score=683566.000000 s hg38.chr19_GL949753v2_alt 497770 984 + 796479 GTGGAGATATGGGCTTGGGGTGGAGATATGGGCCTGGATTGGAGATATGGGTCTAGGGTGGAAATATTGGCCTGGAGTGGAGATATGGGCCTGGAGTggagatatgggcttggggtgggg----------------------------------------------------------------------------ataggggcctggggtgcggatatgggCCTGCAGGCTGGGTCTCTACACAGCCGACAGCCCTGTTCTTGGGTGCAGGCTGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGT-CCTGGTTTGCCTGCAGATGGATGGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGAGGAGACCCTGGGGTGCTCAGCCCACAGTTCCGACCTTGCCCTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCCTCCAAGCTGGGCTGTGCGGCTGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCT-CAGAGGTGGGGGAACCCCAGCCAGGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTATGTGAGTAATCTTGCAGGATTAAAATCTAGTAGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGG s panTro4.chr19 59691949 984 + 63644993 gtggagatatgggcttggggtggaggtatgggcctggattggagatatgggcctagggtggaaatatcagcctggagtggatatatgggcctggagtggagatatgggcttggggtgggg----------------------------------------------------------------------------atatgggcttggggtgtggatatgggcctggaggctgggTCTCTGCACAGCTGACAGCCCTGTTCTTGGGTGCAGGCAGGCACTGAGGGTGAGTTTCCCTTCAGCCCAGCAAGGGCCTGGCTACCAAGACTCACAGCCCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGCAGATGGATGGTCCATCACGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAAGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACAGGAGGGAAGCCCGGTGGGGGATTTTCTTATAAACAAGGATGACGAGACCCTGGGGTGCTCATCCCACAGTTCCGACCTTGCCGTCCCCAGCCTTCCTTTCCCTTGGCTGAGTCAGGTTCTGTGGGAACCCGGGAGGGTAGACTGGGGTCATCCAAGCTGTGCTGTGCGGCGGGGATGTGGTGTCACTGGCAGAGGAAGGGAGCAAAGCAGTGCTAGGAACAGCAGG-CCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGCGTTTCCATGACTGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCT-AAGAGGTGGGGGAACCCCAGCCATGGCCCTGACCTTCCAAATCCTCTGTTGGGGGCTCAGTTGTGTATTGTGGTTCACACATTGGCTGATATTCCATTCACAAAGAACATGCCCTCGACTCCATGTCTA-TTTGTGTTGTTTTATGTGAGTAATCTTGCAGTATTAAAATCTAGTGGGAGTCCCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGAGAGACGCCAAGTCTATGCGGGG i panTro4.chr19 T 44016 I 27712 s ponAbe2.chr19 56647979 928 + 60714840 --------------------TGGAGATATGGGTCTGGATTGGAGATATGGGCCTAGGGTGGAAATATCGGCCTGGAGTGGAGATATGGGCCTGGAGTGGAGATATGGGCTTGGGGTGGGG----------------------------------------------------------------------------ATATGGGCCTGGGGTGGGGATATGGGCCTCGAGGCTGGGTCTCTGCACAGCCGACAGCTGTGTTTTTGGGTGCAGGTAGGCACTGAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCGTGGCTACCAAGACTCACAGACCAGTGGGGGCAGCAAGGGAGG-CCTGGTTTGCCTGCAGATGGATCGTCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGGTGAGTCCTTCTCCAAACCTTAGGGTGTCATCTCCCCACATAAGAGGATTTTCCTGAAACGCGAGGGAAGTCCTGTCAAGGAGTCTCTCATAAACTAGGAAGAGGGGACCCTGGGCTGCTCGGCCCACAGTTCTGACCTTGCC-TCCCTGGCCTTTCATTCCCTTGGCAGAGTCAGGTTCTGTGGGGACCAG---GGTTAGACCGGGGTGCTCAAAGCTGGGGTGTGTGGTGGGGAAGTGG---------------------------------TAGGAACAGCAGATCCTCTGAGGACAAAGGTGTTACTCACACACTTCAGCGTTTCCATGACGGTAGGGGCTGCAGTGTGGCTGCTGTCATTCTACCA-GAAGAGGTGGGAAACCACAGCCATGGCCGTGACATTCCAAATCCTCTGATGGGGGCTCAGTTGTCTATTTTCGTTCAGGCATCCGCTGATA-TCCATTCACAAAGGACATGCCCTCCACCCCATGTCTACCTTGTGTTGTTGTATGTGAGTAATCTTACAGTATTAAAATCTAGTAGGAGTCTCTTACTCAGCACTTGCTCAAAGTTCTCAGCTGACACTTTTGTTGTAGGGAGATGCCATGTCTTTGTGGGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47763504 969 + 51301725 -tGGAGATAGGAGCTTGGAAAGGAGATATGGGTTTGGAGTGGAGATATGGGTCTGGAGTGCAGATAtgagcctggagtggagatatgggcctggagtTGAGATATGGGCTTGTTGTGTAG----------------------------------------------------------------------------ATCTAGGCCTGGGGTGCAGATCTGGATCAGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAG-CCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCCGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGACAGTCTCTCATAAACTAAGTAGGGGAGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGG---GGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGCgactgaggaagggagggaagcagtGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGAcggtcagggctgcagtgtggCTGCTGTCACTCTAccagaagatgtggagaaaccaCAGCCATGACCCTGACATTCCAAATCTTCTGATGGGGACTCA-------------GTTCATGCACTGGCTGATGTTCCATTCACAAAGGACATGCCCTCCATGCCGTGTCTactttgtgttgttttatgtGAGTGATCTTGAAGCATTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACCTTTGTTGTAGGGAGACGCCATGTCTATGTGGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47481289 1046 + 50890351 GAGGAGATGGGAGCCTGGAGTGGACATATGGGACTGGGGTGGAGATATGAACCTGGAGTGCAGATATTAGCCTGGAGGGGAGATATGAGCCTGGAGTGGAGATATGGGCCTGGAGGGCAGATAGGAGCCTGGAGGGGAGATATGGGCCTGGAGTAGAGATATCAGCGTGGAGTGGACATGTGGGCCTGTTGTGTAGATCTAGGCCT-GGGTGCAGATCTGGATCCGGAGGCTGGGTCTCTGCACAGCTGACATCCCTGCT-GCGGGGGCAGGTGGGCAGCCAGGGTGAGTTTACCTTCAGCCCAGCAAGGGCCTGGCTGCCCAGACGCACAGCCCCGTGGGGGCAGCAGGGGAGGCCCTGGTTTGCCTGCAGATGGATCATCCATCATGATCTTTCTTTCCAGGGTTCTTCTTGGTCCAGAGGGCCTGTCCACACACGGGTGAGTCCTTCCCCAAACCTTAGGGTGTCATCTCCCCACCTAAGAGGATTTTCCTGAAACAGGAGGGAAGTCCTGTCAGAGAGTCTCTCATAAACTAAGAAGGGGGGACCCTGGGGTGCTCGGCTCACACTTCTGACCTCGTCCTCTCTGGCCTTTCTTACCCTTGGCTGAGTCAAGCTCTGTGAAGACCGG---GGTGAGCTTGGGGTGCTCCAAGCTGAGGTGTGCAGGGAGGAAGTGGTGTCAGTGACTGAGGAAGGGAGGGAAGCAGTGCTAGGAACAGCAGGTCCTCTGAGGACAAAGGTGTAACTCACACCCTCCAGTGTTTCCATGACGGTCAGGGCTGCAGTGTGGCTGCTGTCATTCTACCAGAAGAGGTGGGGAAACCACAGCCATGACCCTGACATTCCAAATCTCATGTTGGGGGCTCA-------------GTTCATGCACTGGCTGATATTCCATTCACAAGGGACATGCCCTCCATGCCGTGTCTACTTTGTGTTGTTTTATGTGAGTCATCTTGAAGTGTTAAAATCTAGTAAGAGTCCCTTATTCAGCACTTGTTCAAAGCTCTCAGCTGACACCTTTGTTGTAGGGAGACGCCATGTCTATGTGGGA i chlSab2.chr6 I 95 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=56940.000000 s hg38.chr19_GL949753v2_alt 498754 77 + 796479 TGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAA-GTGGAAA--TGGGAGAATCTTCTGA-CAC s panTro4.chr19 59720645 78 + 63644993 TGGGTCCTTCCTGTAGCCCTGGGCACCCAGGTGTGGTAGGAGCCTTAGAAA-GTGGAAA--TAGGAGAATCTTCTGAGCAC i panTro4.chr19 I 27712 C 0 s ponAbe2.chr19 56648907 81 + 60714840 TGGGTCCTTCCTTTAGCCCTGGCCACCAAGGTGTGATAACAGCCATAGAAACGTGGAAAGTGAGGAGAATCTTCTGAGCAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764473 80 + 51301725 TGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAAG-GGGAAGAATCTTCTGagcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482335 80 + 50890351 TGGGTTCTTCCTGTAGCCCTGGACACCCAGGTGTGGTAGGAGCCTTAGAAACATGGAAAG-GGGAAGAATCTTCTGAGCAC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e calJac3.chr22 45773030 2969 + 49145316 T e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=47609.000000 s hg38.chr19_GL949753v2_alt 498831 46 + 796479 GTGGAGGGAGGGGCGGCTCCACATCCTCCTCTCTAAGGTGGCGCCT s panTro4.chr19 59720723 46 + 63644993 AGGGAGGGAGGGGCGGCTCCACATCTTCCTGTCTAAGGCGGCGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56648988 46 + 60714840 AGGGAGGGAGGGGTGGCTCCACGTCCTCCTCTCTAAGGCGGCACCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764553 46 + 51301725 agggagggaggggcGGCTCCACATCCTCCTCTCTAAGGTGGAACCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482415 46 + 50890351 AGGGAGGGAGGGGTGGCTCCACATCCTCCTCTCTAAGGCGGCACCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770061 44 + 49145316 GTGGCGGGTGGGG-GGCTCCACACTCCCCTCTCT-AGGCTGCGCCT i calJac3.chr22 T 2969 C 0 e canFam3.chr1 102921345 36357 + 122678785 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=299227.000000 s hg38.chr19_GL949753v2_alt 498877 315 + 796479 CCTTCTCCCCCAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCCCTGTGGTGTCTGAAGGAGAACATGTGGCTCTTCAGTGTCGCTCTCGTCTTGGGTTTAA---------CGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACA-------GAGTATTCCGA-AACACCGTTTTCATAGGCCCTGTGACCCCAGCACATGCAGGGACC--TACAGATGT--CGGGGTTCACACCCACACTTCCTCACTGGGTGGTCAGC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTCAGAGGGCTCCTGTC s panTro4.chr19 59720769 315 + 63644993 CCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTCCTCTCTGCCTGGCCCAGCGCTGTGGTGTCTGAAGGAGAATATGTGACTCTTCAGTGTCGCTCTCGTCTTGGGTTTAA---------CGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACA-------GAGTATTCCGG-AACAGCCTTTTCATGGGCCCTGTGACCCCAGCACATGCAGGGACC--TACAGATGT--CGGGGTTCACACCCACACTTCCTCACTGGGTGGTCGGC---ACCCAGCAACCCCCTGGTGATCATGGTCACAGGTAAGAGGGCTCCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649034 312 + 60714840 CCTTCTCCCCAAGGTGGTCAGGACAAGCCCTTGCTGTCTGCCTGGTCCAGCCTTGTGGTGCCTCCAGG---ACATGTGATTCTTCAGTGTCACTCTTATCTTAGGTTTAA---------CAACTTCAGTCTCTACAGGGAGGATGGGGTGCCTGTCCCTGAGCTCTACAACA-------GAATATTCTGG-AACAGCCTTTTCATGGGCCCTGTGACCTCAGCACAAGCAGGGACC--TACAGATAT--CAGGGTTCACACCCACACCCCCCCAGTGGGTGGTCGGC---ATCCAGCAACCCCCTGGTGATCATGGTCACAGTTCAGAGGGCTCCTGTC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764599 324 + 51301725 CCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGCTTTACAACTTTACCAACTTCACTCTGTACAAAGACGACAGAAGCCACGTTCCTGTCTTCCATGGCA-------GAATATTCCAG-GAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACC--TACAGATGT--CGGGGTTCATACCCGCACTCCCCCACTGAGTGGTCGGC---ACTCAGCGACCCCCTGGCTATCAGGGTCACAGGTCAGAGGGCTCCTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482461 324 + 50890351 CCTTCTCCCCCAGGTGGTCAGGACAAGACCTTCCTGTCTGCCCGGCCCAGCGATCTGGTGCCTCAGGGAGGACACGTGACTCTTCGGTGTCACTATCGTCGTGGGTTTAACAACTTTACCAACTTCACTCTGTACAAAGATGACAGAAGCCACGTTCCCATCTTCCACAGCA-------GAATATTCCAG-CAGAGCTTCCTCATGGGCCCTGTGACCCCGGCACACGCAGGGACC--TACAGATGT--CGGGGTTCACACCCGCACTCCCCCACTGAGTGGTCGGC---ACACAGTGATCCCCTGGTGATCAGGGTCACAGGTCAGCGGGCTCCTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45770105 312 + 49145316 CCTCCTCTTCCAGGTGCTCTGTACAAACTCTCCCTGTCAGCCCGGCCGAGCCCTGTGGTTCCCCAGGGAGGACGTGTGACTCTCTCCTGTGATTCTCATCTTCGGTTTGT---------CACATTCAAAATATACAAAACATCTGGGACCCAGGACCGTGAGCTGCACA-CT-------GGCCGTTCC---AATGACTTCACCATCAACCCTGTGACCCCAGGACATGCAGGGACC--TACAGATGTTCTGGATCTTTCAGCCGCACCTCAC-----AGTGGTCAGCTGTGCACAGCAACTCCCTGATGCTATTGGTCACAGGTAGGAGAAGTCCAGCC i calJac3.chr22 C 0 I 914 s canFam3.chr1 102957702 310 + 122678785 CCCTTCCATGCAGGTGCCTACAGGGAGCCCTCCCTCTCAGCTCAGCCAGGCTCATTGGTTCATTCTGGAGACAACCTGACCCTGCAGTGTCACTCAGAAGCTGGCTTTGA---------TAGATTCGCTCTGACCAAGGATGAGGAG--------CTCAGACCTGCCCAGCATCTGGATGGTCAACCCAGCCCCGACTTCCCCCTGGACCCTGTGAGCC--GCACCCACGGGGGCCGGTACAGGTGC--TACAGTGGACACAACCTCTCCTCCAC---GTGGTCAGC---ACCCAGTGCCCCTCTGGACATCCTGATCACAGGTGAGAAGCCCCCTG-- i canFam3.chr1 I 36357 C 0 e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=25406.000000 s hg38.chr19_GL949753v2_alt 499192 27 + 796479 TGGGATTCTCCTTGTCCCACCTCCTGA s panTro4.chr19 59721084 27 + 63644993 TGGGATTTTCCTTGTCCCACCTCCTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649346 27 + 60714840 TGGCATTCTCTTTGTCCCACCTCCTGA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764923 27 + 51301725 TGGGCTTCTCCTTGTCCCACCTCCTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482785 27 + 50890351 TGGGCTTCTCCTTGTCCCAACTCCTGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958012 20 + 122678785 -------CCCCATGTCCTGTCTGCTGA i canFam3.chr1 C 0 I 4 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=462956.000000 s hg38.chr19_GL949753v2_alt 499219 649 + 796479 GTCCCAGAGCTTCTGGTGGGAGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAAGGGGATTGAATACAGGGAAATGGGTGCtgtggtggaaagaataattgtccccaatgatgactgcattctaatccctgcagtctgtgactatttatgttataggggaaggcactgaaggggaagatggagctcaggttgttg---agttgaccttgagatggggagacagcctggactgtcctgctgggctcagtgtaatcacaagggtgcacatgagaggagaaggaagaggggagtggcgattagagcagtgcaatggaagtctccatca----------gctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcctgggtctccagagggaacgcagccctgcagatgccttgattttagccctcaaaaaacagggtccgatttctgtctccagaaacggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcaccaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGATAAGAAAGGACACAAGGAtagccgggcgtggtggcaggtgcatgtaatcc s panTro4.chr19 59721111 652 + 63644993 GTCCCAGAGCTTCTGGTGGGGGTGTCCACCAGCGTCCCATCATCCAGACCCTAACTGTATTTGGGGTAAAGGGGGATTGAATGCAGGGAAATGGCTGCtgtggtgggaagaataattgtccccagtgatgactacattctaatccctggagtctgtgactatttatgttataagggaagggacagaaggggaagatggagctcaggttgttgattagttgaccttgagatggggagatggcctcgactgtcctgctgggctcagtgtaatcacaagtgtccacatgaaaggaggaggaagaggggagtggggattagagtagcgtaatgggagactccatca----------gctttgaaggtggaggaaggccatgagccatgaatgcaggtggcctatagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaacacagccctgcagatgccttgattttagcccaggaaaaacagggtccgatttctgtctccagaattggaaggggtcagtgtgctctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCACGTCAAGGACAAGTTAAGAAAGGACACAAGGAtagccaggcatggtggcaggtgcatgtaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56649373 652 + 60714840 ATCCCAGAGCTTCTGGTGGGCGTGTCCTTGAGGGTCCCATCACCCAGGCCCTGACTGTATTTGGGTTAAAGGTGGATTGAATACAGGGAAATGGGTGCtgtggtgggaagaataattgtccccagtgataactgcattctaatccctggagtctgtgactatttatgttataggggaagggactgcaggggaagatggagctcaggttgttgatgagttaaccttgagatggggagacagcctggactgtcccgctggggtcagtgtaatcacaagggtccacatgaaaggaggaggaagaggggagtggggattagagcagcgtaatgacagtctccatca----------gctttgaaggtggaggaaggccacgagccatgaatccaggtggcctatagaggctggaaaagtcaaggaactgattctcctgagtctccagagggaacaaagccctgcagatgtcttgattttagcccaggaaaaacagggtccaatttctgtctccagaagtggaagaggtcagtgtgttctctcctgctgccatgcttctgataattttctacagcagcaacaggaaaccaacacTGGAACCCAGGTCAAGGACAAGTTAAGAAACGACACAAGGAtagctgggcatggtggcaggcccatgtaatgc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47764950 660 + 51301725 ATCCCAGAGCTTCTGCTGGGGGTGTCCACCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTACAGGGGGATTGAATACAGGGAAATGGGTGCTGTGATGGGAGGAATAACTGTCCCCAGTTATGGCTACATGGTAATCCGTGGACCCTGTGACTCTTTATGTTATAGGGCAGGGGACTGAAGGGGAAGATGGAGCTCAGGTTGTTG-TGAGTtgaccttgagatggggagatggcCTGGACTGTCCCAGGGGgctcagtgtaatcacaaggcAACAaacaagaggaggaggatgaggagagtGGGGATTAGAGCAGCGTCGTGGGAGATTCTATCAGCCACTGTGGGctttgaaggaggaggaaggccaCAAGCCACAATGGCAGGTGGCCTCTACGGGCTGGAGAAGTCAAGAGAACCGCTCTGCTGAGTATCCAGAGGGAACACAGTTCTGTAGACGCCTTGATTTCAGCCCAGGGAGAACTGGATCCAATTTCTGTCTCcagaagtgcaaggggtcagtgtgttctctcctgctgccatattTGTGATAATTTTCTGCTGCAGCAACAagaaaccaacacaggaacat-gGTCAAGGACAAGTTAGGAAACCAAACaacaatagctgggcatggtggtgggcacgaGTAAACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47482812 653 + 50890351 ATCCCAGAGCTTCTGCTGGGGGTGTCCGTCAGGGTCCCATCACCCAGGACCTGACTGTCTTTGGGGTAAAGGGGGATTTAATACAGGGAAATGGGTGCtgtgattagaagaataactgtccccaa-tatggttacattctaatccctggagcctgtgactctttatgctatagggcaggggactgaaggggaagagggagctcaggttgttgatgagttgaccttgagatggggagacggcctggactgtcccactgggctcagtggaatcacaaggcaccaaacga---gaggaggatgacaagagtggggattagagcagcgtcgtgggagagtccatcagccactgtgggctttgaaggtggaggaa-gccacgagccacaatgaaaggtggcctctacgggctggagaagtcaagagaattgctccgctgagtctccagagggaacacagttctgtagacgccttgattttagcccagggagaactggatccaatttctgcctctaaaagtggaaggggtcactgtattctctcctggcaccatgtttctgataattttctgccacagcaacaggaaaccaagacaGGAACAT-GGTCAAGGACAAGTtaagaaacca---aacgatagccgggcatggtggtgggcacgagtaaacc i chlSab2.chr6 C 0 I 13 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=4968.000000 s hg38.chr19_GL949753v2_alt 499868 28 + 796479 tagcaactcaggaggctgagggcaggag s panTro4.chr19 59721763 28 + 63644993 tagcgacttgggaggctgagggcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650025 28 + 60714840 tagtgactcgggaggctgggggcaggag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47765610 13 + 51301725 -AACGACT--GGATtc------------ i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e chlSab2.chr6 47483465 13 + 50890351 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=345488.000000 s hg38.chr19_GL949753v2_alt 499896 446 + 796479 aatcacttgaacccaggagacagaggttgcagtgagcctagaccacaccacttcactccagcctgggtgaaggagtgagactctgactccaaaaTTAATTAATT--------AATTAAAGAAACCAAACAAAGAGAAGGTTGGCTACACCGAGATCAGCAAGGGTGGGATGATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTTGATACTCCTCAAACCAGCACCAGAAGCCAGCCTATGGAAGCTGGCACCATGGAGAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTTCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAGTCTGCTAAGAGCCTGGACGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATAGA s panTro4.chr19 59721791 432 + 63644993 aatcacttgaacccaggaggcagacgttgcagtgagcctagaccacaccacttcactccagcctgggcgaaggagtgagactctgtctctaaaaTTAATTAATT--------AATTAAAGAAACCAAACAAGGAGAAGGTTGGCTACACCGAGATCAGCAAGGGTGGGATTATGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTTGATACTCCTCCAACCAGCACCAGTAGCCAGCCTATGGAAGCT--------------GGCACAGGCATGGCAACAGTGGCTCCCAGTCCCCACCAGGAACAGGGTGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGACATGCAGCCTATCCTGGTTCCTCTTCCACCCCCACATCGA i panTro4.chr19 C 0 I 16266 s ponAbe2.chr19 56650053 446 + 60714840 aatcacttgaacccaggagacagaggttgcagggagcctagaccacaccacttcactccagcctgggcaaaggagtgagactctgtctccaaaaTTAATTAATT--------AATTAAagaaaccaaacaagtagaaggttggttaccctgagatcagcaagggtgggatgatgatgccaccaccaggctccatccacatagggaggggttgaaactcctcaaaccagcaccaggagccagcctatggaagctggcaccatggagAAGGCACAGGCATGGCAAGAGTGGCTCCCAGTCCCCACCAGGAACAGGCTGTGTGGACACTGCTGCCTGCCTTACTGATCAGTTCATACCTCCTGCCAAGGATTCCAATTCATCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGATGTGCAGCCTATCCTGGTTCCTCTTCCACCCCCACACAGA i ponAbe2.chr19 C 0 I 1 s papAnu2.chr19 47765623 450 + 51301725 aatctcttgaatccgggag---gaagttgcagtgagccaagaccacaccactacactccagcctgggtgaaaaagtca-actctgtgtcaaaaattaaataattaatcaattaattaaagaaaCCAAACAAGGAGAAGGTTGGCAACCCCGAGATCAGGAAGGGCGGGACGCTGATGCCACCACCAGGCTCCATCCACATAGGGAGGGGTCGATGCTCCTCGAACCAGCACCAGGAGCCACCCTGTGGAAGCTGAGGCCATGGAGAAGGCACAGGCGTGGCAGGAAAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTTCATTCCTCCTGCCAGGGACTCCAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAACCGGGACATGGAGCCTGCCGTAGTTCCTCTTCCAGCCCCACATAGA i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47483478 454 + 50890351 aatcgcttgaatccgggaggcagaaattgcagtgagccaagaccacaccactatactccagcctgggtgaaaaagtgacactctgtctcaaaaaTCaattaattaatcaatgaattaaagaaaccaaacaaggagaaggttggcaaccccgagatcaggaagggctagacgttgatgccaccaccaggctccatccacatagggaggggtcgatgctcctagaaccagcaccaggagccaccctgtggaagctgaggccatggagAAGGCACAGGCATGGCAGGAGAGGCTCCCAATCCCCACCAGGAACAGGGAGTGTGGACACTGGTGCCTGCCTTACTGATCAGTCCATACCTCCTGCCAGGGACTCTAGTTTGTCCAAAAGAGATTGAACCAGGCTGCTAAGAGCCTGGAAATGCAGCCTGCCGTGGTTCCTCTTCCAGCCCCACACAGA i chlSab2.chr6 I 13 I 1 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=9560.000000 s hg38.chr19_GL949753v2_alt 500342 11 + 796479 AGCAGGAAAGA s panTro4.chr19 59738489 11 + 63644993 AGCAGGAAAGA i panTro4.chr19 I 16266 C 0 s ponAbe2.chr19 56650500 11 + 60714840 AGCAGGAAAGA i ponAbe2.chr19 I 1 C 0 s papAnu2.chr19 47766074 11 + 51301725 AGCAGGAAAGA i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47483933 11 + 50890351 AGCAGGAAACA i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T e rheMac3.chr19 60531863 7409 + 64156825 T a score=67799.000000 s hg38.chr19_GL949753v2_alt 500353 60 + 796479 CATTAGTTCGAAATAGATACAACAGCCCAAGAGATGAGGCTGAGCCCAGCGGCAAGGGAA s panTro4.chr19 59738500 60 + 63644993 CATTAGTGTGAAATAGATACAACAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650511 60 + 60714840 CATTAGTGTGAAATACATACAACAGCCCAAGAGATCAGGCTGAGCCCAGCAGGAAGGGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524454 60 + 64156825 GATTAGTGGGAAACAGATACAACAGCCTAAGAGATGACACTGAGCCCAGTGGGAAGGGAA i rheMac3.chr19 T 7409 C 0 s papAnu2.chr19 47766085 60 + 51301725 GATGAGTGGGAAACAGATACAGCAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47483944 60 + 50890351 GATTAGTGGGAAACAGATACAACAGCCTAAGAGATGAGGCTGAGCCCAGTGGGAAGGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102958032 4 + 122678785 I e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=74607.000000 s hg38.chr19_GL949753v2_alt 500413 67 + 796479 TCAGGAGCTACTa--------gagacagagggacagagaagaggg--agggagacagaTGGA----AGGACCTGTACCAGG s panTro4.chr19 59738560 67 + 63644993 TCAGAGGCTACTA--------GAGACACAGGGACAGAGAAGAGGG--AGGGAGACAGATGGA----AGGACCTGCACCAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650571 66 + 60714840 TCAGAGGCTACTA--------GAGACAG-GGGACAGAGAAGACGG--AGGGAGACAGATGGA----AGGACCTGCACCAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60524514 66 + 64156825 TCAGGGG-TCCTA--------GAGACAGAGAGACAGGGAAGAGGG--AGGGAGACAGATGGA----GGGACCTGCACCAGG i rheMac3.chr19 C 0 N 0 s papAnu2.chr19 47766145 67 + 51301725 TCCGAGGCTACTA--------GAGACAGAAGgacagagaagaggg--agggacaCAGATGGA----GGGACCTacacaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484004 64 + 50890351 TCCGAGGCTACTA--------GAGACAGACGGACA---AAGAGGG--AGGGACACAGATGAA----GGGAACTGCACCAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958036 81 + 122678785 TCAGGGGCCACTGTCACCCCTGGGTGATGGGGTCCGGGGAGAGGGTCAGGAGCACAGGCTGAGATGGGGCCATGTTCTAGG i canFam3.chr1 I 4 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=29478.000000 s hg38.chr19_GL949753v2_alt 500480 61 + 796479 AGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGATAAGACACCAG------ s panTro4.chr19 59738627 60 + 63644993 AGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGAC-AGACACCAG------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650637 60 + 60714840 AGTTATGGGCACAGAAAAGAACATGAAGA--CACAGAGAGGAAGGAGAG------AGAC-AGACACCAG------ i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766212 49 + 51301725 ------ggat-----aaaagacagggaga--cacagagagggagtacag------agac-agacagcgg------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484068 49 + 50890351 ------GGAT-----AAAagacagggaga--cacagagagggaggagag------agac-agagagCCG------ i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958117 73 + 122678785 -GACAGGGGCTGAAAAATGGCCGGTGAGGGTCATGGAGATGAAGGACATCCACTCAGAG-AGACAAGAGGAGCTG i canFam3.chr1 C 0 C 0 e calJac3.chr22 45770417 914 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=205608.000000 s hg38.chr19_GL949753v2_alt 500541 208 + 796479 CGAGGGGAAGCCTCACTCATTCTA---------------GGTGCCATGGATGGGATGA---------TAAAGAGAGATGCCTTCTAAAGTCACAACCTCTCTT---CCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGG-------TCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAA s panTro4.chr19 59738687 215 + 63644993 TGAGGGGAAGCCTCACTCATTCTA---------------GGTGCCATGGATGGGATGA---------TAAAGAGAGATGCCTTCTAAACTCACAACCTCTCTT---CCTAGGAGTCCACACAAAACCTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGACATCCTGCAGATGTCATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650697 208 + 60714840 TGAGGGGAAGCCTCACTCATTCTA---------------GGTGCAATGGATGGGATGA---------TAAAGAGAGACGCCTTCTAAACTCACAACCTCTCTT---CCTAGGAGTCCACAGAAAACCCTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGG-------TCAGATGTCAAGTTTGAGCACTTCCTTCTGCACAGAGAGGAGAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766261 208 + 51301725 ggaggggAACCCTCACTCGTTCCA---------------GGTGCCATGGATATGATGA---------CAAAGGGAGACGCCTTCTAAACTCACAACCTCTCTT---TCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCC-------TCAGATACCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484117 208 + 50890351 GGAGGGGAACCCTCACTCATTCCA---------------GGTGCCATGGATATGATGA---------CAAAGGGAGACGTCTTCTAAACTCACAACTTCTCTT---TCTAGGAGTCCACAGAAAACCTTCCCTCCTGGCCCTCCCAGGTCCCCTGGTGAAATCAGGAGAGACGGTCACCCTACAATGTTCG-------TCAGATATCGTGTTTGAGCACTTCTTTCTGCACAGTGAGGTGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771331 204 + 49145316 CGAGGGAGAGCTTCACCC---TGA---------------GGTCCCAGGTGAGGGGTGA---------GGAAG-GAGACCCCTGTGAATTCCTCTGTCTTTGCT---CCCAGGTGCATTCACAAAACCTTCCATCTCAGCCCACCCAAGCTCCCTGGTGGCTGCGGGAGTTAGGGTGACCGTGAGCTGTCAC-------TCGGAGCTGGCATTTGATGAGTTTATCTTATACAAAGATGGGCA i calJac3.chr22 I 914 I 53 s canFam3.chr1 102958190 233 + 122678785 AGAGGGGGTCCCACACAGAGTCTCTGGAGAGACGAAGGTGGTCCCCCAGCTGGGTCAAGGGCATATGTGGAGAGGCAGGCCTCTACACATCACGACCTTCCTTTTCCCCAGGAATATACCCAAAACCATCCCTCTCAGCCCAGCCTGGGCCTTCAGTATCCTGGGGAGAGAATGTGACCCTGCAGTGTCGC-------TCTGAGATCTGGTTCAATACCTTCCACCTGTCCAAGGAGGGG-- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55654365 12136 + 59248254 T a score=23192.000000 s hg38.chr19_GL949753v2_alt 500749 47 + 796479 GTTTAATGACACTTTGCGCCTCACTGGAG-----AGCTCCATGATGGGGTCT------ s panTro4.chr19 59738902 47 + 63644993 GTTTAACGACACTTTGCGCCTCATTGGAG-----AGCACCATGATGGGGTCT------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650905 47 + 60714840 GGTTGAGGACACTTTGCGCCTCACTGGAG-----AGCTCCATGATGGGTTCT------ i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766469 47 + 51301725 CTTTGAGAAGCCCCTGCACCTTGTTGGAG-----AGCTCCATGGTGGAGGTT------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484325 47 + 50890351 CTTTGAGAAGCCCTTGCACCTTGTTGGAG-----AGCTCCATGGTGGGGGTT------ i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102958423 49 + 122678785 ---------TCCCTTGCTCCTCCCCAGCACCTTCATCTGCAGGATACAGCTATACCGT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45771535 53 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=166997.000000 s hg38.chr19_GL949753v2_alt 500796 136 + 796479 CCAAGGCCAACTTCTCCATCGGTCGCATGACGCAAGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTTCCTCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATTACAGGTGAGAG s panTro4.chr19 59738949 136 + 63644993 CCAAGGCCAACTTCTCCATCGGTCGCATGACGGAAGACCTGGCAGGGACCTACAGATGCTACGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCTCCCAGTGACTCTCTGGACATTGTTATCATAGGTGAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56650952 136 + 60714840 CCAAGGCCAACTTCTCCATCGGTCCCATGACGCCTGCCCTTGCAGGGACCTACAGATGCTATGGTTCTGTTACGCATTCCCCCTATCAGTTGTCAGCTCCCAGTGACCCTCTGGACATCGTGATCACAGGTAATAA i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766516 136 + 51301725 CCCAGGCCAACTACTCCATCAATTCCATGACGTCTGCCCTTTCAGGGACCTACAGATGCTACGGTTCTGTCACTCACTCCCCCTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATGGTGATCACAGGTGAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484372 136 + 50890351 CCCAGGCCAACTATTCCATCAATTCCACGACGTCTGACCTTGCAGGGACCTACAGATGCTACGGTTCTGTCACTCAATCCCACTATGTGTTGTCAGCTCCCAGTGACCCCCTGGACATCGTGATCACAGGTGAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771588 136 + 49145316 TCAAGGCTGTCTTTTGCCTGGGTCCTGTCACGCCGGCCCAGGCAGGAGCCTACAGATGCTGTGGTTCTTTCAGTCACTCCCGCTATGAGTGCTCGGCTCCCAGCGACCCCCTGGAGATTGTGATCACAGGTGAGTG i calJac3.chr22 I 53 C 0 s canFam3.chr1 102958472 136 + 122678785 ATGAGGTCAACTTCACCCTGAATCCTGTGACCTCAGACCACCAGGGGACCTACAGGTGCTACAGCTCACACAACTCCTCCCCCTACCTGTTGTCAAGTCCCAGTGACTCCCTGGAGCTCCTTGTCTCAGGTGAGAG i canFam3.chr1 C 0 N 0 e macFas5.chr19 55654365 12136 + 59248254 T a score=11013.000000 s hg38.chr19_GL949753v2_alt 500932 9 + 796479 TGTCTGGAC s panTro4.chr19 59739085 9 + 63644993 TGTCCGGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651088 9 + 60714840 TGTCCGGAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766652 9 + 51301725 TGTCCGGac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484508 9 + 50890351 TGTCCGGAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45771724 9 + 49145316 TGGCTGGAC i calJac3.chr22 C 0 I 627 e macFas5.chr19 55654365 12136 + 59248254 T a score=505231.000000 s hg38.chr19_GL949753v2_alt 500941 624 + 796479 ATTATTCTCATTGTCACTGGGACACAGAGTGAATGATCCACGACTTGGAGG-CCCAGGTGGTTATAAGGAAGATGAGCTTGGTATTCTTATGGAGAGAGACTAATTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGAC------ACAGACAGAC--ATGTGCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACTTCCACAAAGTGTTCTCTACCAGAAGAACCCAAGGACACCCATATTTCTGGCCTGAGTTGGGCCCTGTGGCCTCAGGCCTTCTGGCACCTACAGATGCCGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGAGTAATCGTCCCAGGATATCATGGCCCCAGAACATCAACCCCTGTATACTGTGTGAACTTGCGG-TCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACACCAAAAAGCAAAGACAT s panTro4.chr19 59739094 624 + 63644993 ATTCTTCTCATTGTCATTGGGACACGGAGTGAATGATCCACGACTTGGAGG-CCCAGGTGGTTGTAAGGAAGATGAGCTTGGTATTCTTAGGGAGAGAGACTAACTTGGTGAGGTCTGTACAAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGTTAGAAAAGACAGAAAGAGTTAAAGGAGAC------ACAGACAGAC--ATGTCCCAGAGAGAGGTGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAGAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGTCTTGTGGCACCTACAGATGCTGTGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGAGTAATCGTCGCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGCAG-TCCCCAGACTGGATTCTGAGGCTCACATTCCAAATAACCCCACATATGATAGGATCACTGAGAGGCACAGAGAGAAATCAAGAACACCAAAAAGCAAAGACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651097 625 + 60714840 ATTCTTCTCATTGTCATTGGGACGCAGAGTGAATGATCCAGGACTTGGAGG-CCCAGGTCATTGTAAGGAAGATGAGCTTGGTATTCTTAAGGAGCGAAACTGACTTGGTGAGGTCTGTACCAACAGAGACAGAGAAACAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGAAGTTAGAAATGACAGAAAGAGTTAAAGGAG--------ACAGACAGACAGATGTCCCAGAGAGAGATATCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGAAGTTTCATTTCTGTTTTACCTCCACAAAGTGTTCTCTACCAGGAAAACCCAAGGACACCCATATTTCTGACCTGAGTTGGGCCCTGTGGCCTCAGGCCTTGTGGCATCTACAGATGCCATGTTTATTCTGACACCTCTGCCTTCCATGCAATGGAGAGTAATCATCCCAGGATATCATGGCCCCAGAACACCAACCCCTGTATGCTGTGTGAACTTGGGGTTCCCCAGACTAGATTCTGAGGCTCACATTCCAAATAACCCCACATATGAGAGGATCACTGAGAGACACAGAGAGAAATCAGGGACGCCAAAAAGCAAAGACAT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47766661 630 + 51301725 attcttctcattgtcacCGGGACACAGAGTGAATGATCCAGGACTTGGAAGCCCCAGGTGGTCATGAGGAAGATGAGTGTGGGAATCTTATGGAGAGAGACTCACTTGGGGAGGTCTGTAccaacagagacagagaaacagaatacACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAAGgaggtagaaaagagagaaagagttaaagGGGACACCCAGACACACAGAC--ATGTCCCAGAGAGAGGCGTCCTTCCATGCTGACTTTGCTCAGAGACCTGGCACAGGTTAGaagtttcatttctgttttacctCCACAAAGTGTT-TCTACCAGGAGAACCCAAGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGACCTTGTGGCACCTACAGATGCCATGTTTGTTCTGACACCTCTGCCTTCCGTGCAGTGGAGAGTCATCGTCCCAGGATATCGTGGCCCCAGAACACCAACCCCTGTATGCTGTGTGTACTTGGGG-TCGCCACACTGGATTCTGAGGCTCATATTCCACAGAATCCCACATATGATAGGATTCCTGAGAGACGCAGAGAGAAATCAGGAacatcagaaagcaaagaaat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47484517 630 + 50890351 ATTCTTCTCATTGTCACTGGGACACAGAGTGAATGATCCAGTACCTGGAAGCCCCAGGTTGTCATGAGGAAGATGAGTGTGGGATTCTTATGGAGAGAGACTGACTTGGCGAGGTCTGTACCAACAGAGACAGAGAAATAGGAGACACAAGTACAGACCAGGTGTCATAACAGAGGACAGACACAGGGGCCATACAGGGAGGTAGAAAAGAGAGAAAGAGTTAAAGGGGACACCCAGACAGACAGAC--ATGTCCCAGAGACAGTCGTCCTTCTGTGCTGACTTTGCTCAGAGACTCGGCACAGGTTAGAAACTTCATTTCTGTGTTACCTCCACAAAGCGTT-TCTACCAGAAGAACCCAAGGACACCCATATTTCTGTCCTGAGTCAGCCCCTGTGGCCTCAGGCCTTGTGGCACCTACAGATGCCGTGTTTGTTCTGACACCTCTGCCTTCCGTACAGTGGAGAGTCATCGTCCAAGGATATCGTGGCCCCAGAATACCAACCCCTGTATGCTGTGTGTACTTGGGG-TTCCCAGACTGGATTCTGAGGCTAATATTCCACAGAACCCCACATATGACAGGATTCCTGAGAGACACAGAGAGAAATCAGGAACATCAAAAAGCAAAGACAT i chlSab2.chr6 C 0 T 33015 e calJac3.chr22 45771733 627 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=348655.000000 s hg38.chr19_GL949753v2_alt 501565 538 + 796479 AAACACACAGAG-AATGAGCCAGAGGAAGGAGATTGAGAGACTCACAGACACATAAAGAGGGAGAAAAGAGGGCAGAGAAGTGGAGAGAACAATGGAAGGGAACAGAGAAAAGCACTAAAATTAGAGTCCTGAGGGAGAGGCACAAGGACATAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCCAAAGAGAACTAGAGAGACCGAGAGGCAGAGCA------------------agacagatgatagatg----gatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgatcgattcattcattgattaatcgatgatacatagagatgatgaagatga----------------------------------------------------------------------agatagatagataatacatagagatagagaggcagacaa--agagaaatcatagagagagagagatgatac------atagatatagataatagatgatttttg----gataga------------caattgatagataaatagattatatatagatatagatgacaggtagagaatttgtagataggcaccagatagataaatagatat s panTro4.chr19 59739718 540 + 63644993 AAACACACAGAG-AATGAGCCAGAGGAAGGAGACTGAGAGACTCACTGACACATAAAGAGACAGAAAAGAGGGCAGAGAAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGcactaaaattagagtcctgagggagaggcacaaggacatagaaagatggagatgtggggatgaattgcagagattccaaagagaactagagagaccgagaggcagagca------------------agacagatgacagatg----gatagatatagatagatgataaataggtagatgatagata----ataggttatagatacatagatgatgattgattgattcatcgattaatagatgatacatagagatgatgaagatga----------------------------------------------------------------------agatagatagataatacatagagatagagaggcagacaaagagagaaatcatagagagagagagatgatac------atagatatagataatagatgattgatg----gataga------------caattgatagataaatagatgatatatagatatagatgacaggtagagaatttGtagataggcacctaatggataaatagatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56651722 542 + 60714840 AAACACACAGAG-AATGAGCCAGAGGAAGGAGATTGAGAAACTCACAGACACATAAAGAGAGAGAAAAGAGGGCAGAGAAGTGGCGAGAATGATGGAAGGGAGTAGAGAAAAGCACGAAAATTAGAGTCCTGAAGGAGAGGCACAAGGACTTAGAAAGATGGAGATGTGGGGATGAATTGCAGAGATTCCAAAGAGAACTAGAGAGACCGAGAGGCAGAGCA------------------agacagatgatagatg----gatagatatagatagatgataaataggtagatgatagata----ataggttataggtacatagatGATGATTGATTGACTCATTGATCAATAGATGATACATAGAGATGATGAGGATGA----------------------------------------------------------------------agatagatagataatacatagagatagagaggcagacaaagagagaaatcat--agagagagagatgatac------atagatatagataatagatgattgatggatagataga------------caattgatagataaatagatgatatatagataTAGAGGACAGGTAGAGAATTTGtagatagacactgaatagataaatagatag i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47767291 637 + 51301725 aaacacacacagaaatgagCCAGAGTAAGGGGACTGAGAGACTCACAGAcacataaagagagagaaaaaagggcagaggagtggagagaatgatggaagggaggagagaaaagctCCAAAATCAGAACCCTGAGGGCGGGGCACAAAGACAGAGATAGATAAAGATGTGAGGATGGATTGCagagattccaaatagaactagagagactgagaggcagagaaagacaaggagatggagagagacagatggtagatggatagatagatatagatagatgataaataggtagatgatagataatggatgggttatacatacatagatggtgactgatag------------gtagatgatacatagagatgatgatagatagatagatagatagatagatagatagatagatagatagatagatagacagatagacacatagatagataacagatacgtagatgatacatagagacagagagggagacagatagagagg------gaacagacagatgatacatagatatagatatagataatagatagatggtggatagatagagagacaga----cgatagagagacagataaatgacacagagatacagattacagatagataattgatagactgacaggtagtagatagatagatcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47452132 540 + 50890351 AAACACAAAGAG-AATGAGCCAGAGGAAGGGGACTGAGAGACTCACAGACACATAAAGAGAGAGGAAAGTGGGCAGAGGAGTGGAGAGAATGATGGAAGGGAGCAGAGAAAAGCTCCAAAATCAGAACCCTGAGGGAGGGGCACAAAGACAGAGATAGATAAAGATGTGGGGATGGATTGCAGAGATTCCAAATAGAACTAGAAAAACTGAGAGGCAGAGAAAGACAAGGAAatggagagagacatatgatagatgaatggatagatgtagatagatgataaataggtaggtgatagataatggatgggttatagatacatagatgatgattgatag------------atatat----------------------------------------------------------------------------------------------agatacgtagatgatacatagagacagagaggcagacagatagagagg------gaacagacagatgatac------acagatatagataatagatagatggtggatagatagagagacagaaaattgatacagagatagatacatgcaacatagataCAGATTACagatagataattgatagattgataggtagtagatagatagatcg i chlSab2.chr6 T 33015 I 33397 e calJac3.chr22 45771733 627 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=254073.000000 s hg38.chr19_GL949753v2_alt 502103 327 + 796479 atcgatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTT-AAAAAAAGTAACATCAAGTCAACTAGTCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATATCTagaggtgagaaagtgaggtcagagacctagagagacagagaaggtggaaagaggaaatagacataaagagagatggtgtggagggtgagacagagagagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGGGAGGGGAGTTGTGACAAGGAAGAACCTCCCTGAGG s panTro4.chr19 59740258 327 + 63644993 atcaatagataatagatagaAATATGCAGAAAGTTATGAACAGGACACAAAGTGAGAAACTCAGAATTT-AAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATATCTAGAGGTgagaaagtgaggttagagacctagagagacagagaaggtggaaggaggaaatagacataaagagagatggggtggagggtgagagagagagagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGGTCAGGTGGGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652264 324 + 60714840 atcggtagata----atagaAATATGCAGAAAGTTATGAAGAGGACACAAAGTGAGAAACTCAGAATTTAAAAAAAAGTAACATCAAGTCAACCAATCCAAGGAGAGTCAGAGAGAATAAAACAATCCAAAAAGGGAAAACATATCTAGAGGTGGGGAAGTGAGGTCAGAGACCTagagagacagagaaggtggaaggaggaaatagacatgaagagagatggggtggagggtgagagatagagagagagCATTAGGCCATAGAGCAGGGGAGTGAGTTCTCAGCTCAGGTGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47767928 325 + 51301725 atcgatagataatggatagaAATGTGCAGAAGGTTATGAACAAGACAGAAAGTGAGAAActcagaattaaagaaaaaggaagatcaaGTCAAC-AATCCAAGGAGggtcagagagaagaaaacaataaaaaaagggaaaacacacCTCAGGCTGGGGAAGTGAGGTCAGAGAcctagagagacagagaaggtggaaggaggaaacagacatgaagagagacggggtggagggtgagagac--agagagagcattaggtcatagatcagaggagtgagTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTGAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486069 319 + 50890351 atcgatagataatagatagaAATGTGCAGAAGGTTATGAACAAAACAGAAAGTGAGAAACTCAGAATTAAAGAAAAAGGAAGATCAAGTCAAC-AATCCAAGGAGGGTCAGAGAGAAGAAAACAATACAAAAAGGGAAAACACACCTCGGGCTGGGGAAGTGAGGTCAGAGACCTAGAGACACagagaaagtggaaggaggaaacagacaagaagagagaCGGGGTGGAGGGTG--------ACAGAGAGCATTAGACCATAGAGCAGGGCAGGGAGTTCTCAGCTCAGATGTGAGGGGAGCTGTGACAAGGAAGAACCTCCCTAAGG i chlSab2.chr6 I 33397 C 0 e calJac3.chr22 45771733 627 + 49145316 I e macFas5.chr19 55654365 12136 + 59248254 T a score=320964.000000 s hg38.chr19_GL949753v2_alt 502430 326 + 796479 AAACTGCCTCTTCTCCTTCCAGGTCTATGTGGGAAACCTTCTCTCTCAGCCCAGCCGCGCCCCATGGTTAAGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATCTACCATCTATCAAGGGAGGGGGAGGCTCATGAACTTAGGTTCCCTGCAGTGCCCAAGGTCAATGGAACCTTCCAGGCCAACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACGAGTGGTCAGACCTTAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAC s panTro4.chr19 59740585 326 + 63644993 AAACTGCCTCTTCTCCTTCCAGGTCTACGTGGGAAACCTTCTCTCTCAGCCCAGCTGGGCCCCACAGTTCAGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCCGGAGCTCCTATGACATCTACCATCTATCCAGGGAGGGGGAGGCTCATGAACGTAGGCTCCCTGCAGAGCCCAAGGTCAATGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCATGGAGGGACCTACAGATGCTTCGGCTCTTTCCGTGACTCTCCCTACAAGTGGTCAGACCTTAGTGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652588 326 + 60714840 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCAGGGTTCTGGCAGGAGAGAGCGTGACCTTGTCCTGCAGCTCCAGGAGCTCCTTTGACATCTACCATCTACCCAGGGAGGGGAAGGCTCATGAACTTAGGCTCCCTGCAGTGCCCAAGGTCAACGGAACATTCCAGGCTGACTTTCCTCTGGGCCCTGCCA------CCCACGGAGGGACCTACAGATGCTTCGGCTGTTTCCGTGACTCTCCCTATGAGTGGTCAGACCCGAATGACCCACTGCTTGTTTCTGTCACAGGTGAGGAAAC i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768253 326 + 51301725 AAACTGCCTCTTCTCCTTCCAGGTCTATATGAGAAACCTTCTCTCTCAGCCCAGCCAGGCCCCATGGTTCAGGCAGGAGAGAACGTGACCTTGTCCTGCAGCTCCCAGAACTTGTTTGACGTGTACCATCTATCCACGGAGGGGGAGGCTCGTGAACTTAGTCTCTCTGCAGTGCCAAGCGTCAATGGAACATTGCAGGCCACCTTCCCTCTGGGCCCTGCCA------CCCATGGAGGAACCTACAGATGCTTTGGTTCTTTCCGTACCACACCCTACAAGTGGTCAAACTCGAGTGACCCTCTGGCTGTTTCggtcacaggtgaggaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47486388 326 + 50890351 AAACTGCCTCTTCTCCTTCCAGGTATATATAAGAAACCTTCTATCTCAGCCCAGCCAGGCCCCACGGTGCAAGCAGGAGAGAACCTAACCTTGTCCTGCAGCTCCCAACGCCGCTTTGACATGTACCATCTATCCAGGGAGGGGGAGACCCATGAACTTAGGCTTCCTGCAGTGCCAAACATCAATGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGA------CCCACGGAGGAACCTACAGATGCTTCGGTTCTTTCCATACCACACCCTACCAGTGGTCAGTCCCAAGTGACCCACTGCATGTTTCTGTCACAGGTGAGGAAAC i chlSab2.chr6 C 0 T 78269 s calJac3.chr22 45772360 332 + 49145316 AATCAGCCTCTTTTCCTCCCAGGAAAACACAAAAAGCCTTCTCTCTCCACCCAGGAGGACCCCAGGATGGGGAGTGGAGAGAACGTGACGTTATTCTGCATCTCTGAAATCTCATTTGACCGGTACCATCTGTGGAGAGAGGGGGCTCCTTATGGCCAGTGGCTCAGTGGAGGTCAGGGACACAGGGGAGCATTCCAGGCCAACTTTTCTGTGGGCCTCGCAACGCCAGCCCATGGAGGGACCTATAGATGCTACGGTTCTTTCAATGCCTCCCCCTATGAGTGGTCGGCCCCCAGTGAGCCCCTGCACCTTTCTGTCACAGGTGAGGAGCC i calJac3.chr22 I 627 C 0 e macFas5.chr19 55654365 12136 + 59248254 T a score=1500.000000 s hg38.chr19_GL949753v2_alt 502756 1 + 796479 C s panTro4.chr19 59740911 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652914 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47768579 1 + 51301725 c i papAnu2.chr19 C 0 T 39262 s chlSab2.chr6 47408445 1 + 50890351 C i chlSab2.chr6 T 78269 C 0 s calJac3.chr22 45772692 1 + 49145316 C i calJac3.chr22 C 0 C 0 e macFas5.chr19 55654365 12136 + 59248254 T a score=910.000000 s hg38.chr19_GL949753v2_alt 502757 1 + 796479 A s panTro4.chr19 59740912 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652915 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47408446 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45772693 1 + 49145316 A i calJac3.chr22 C 0 I 91198 e papAnu2.chr19 47768580 39262 + 51301725 T e macFas5.chr19 55654365 12136 + 59248254 T a score=3976.000000 s hg38.chr19_GL949753v2_alt 502758 9 + 796479 GTCTGTTCC s panTro4.chr19 59740913 9 + 63644993 GTCTGTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652916 9 + 60714840 ATCTGTTCC i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47408447 9 + 50890351 ATCTCTTCC i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47768580 39262 + 51301725 T e macFas5.chr19 55654365 12136 + 59248254 T a score=171205.000000 s hg38.chr19_GL949753v2_alt 502767 214 + 796479 CCAAATAGTGGGACTCAGATGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGgacagaagagacacaaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAG s panTro4.chr19 59740922 214 + 63644993 CCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGAGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagaggcatagacagacagacagagcgaggcagacagaTCACATTAGGGTTTGGGGTGGTAACTGCAACCCTACCTGA---AGCTTGCAGATAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56652925 214 + 60714840 CCAAATAGTGGGACTCAGACGGACTACAATGGCCACATTCAGGGGAGCCTCAGATGGAGGGGGTGGCCATGGGGGTGTCAGCCAGAGATGCTGGATAGAAGagacataaagcaaacatacagaaagagatatagacagacagacagagcgaggcagacagaTCACATCAGGATTTGGGGTGGTAACCGCAACCCTACCTGA---AGCTTGCAGATAG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55642229 203 + 59248254 CCAAATAGTGGGACTCAGACAGACGACAATGGCCACATTCAGGGGAACCTCAGA---------TGGCCATGGTGGTGCcagccagagatactggacagaaaagacacagagcaaacatacagaaagag--atagacagacagacagagcaaggcagacagaTCACATCAGGATTTGGGGCGGTAACTGCAACCCTACATGA---AGCTTGCAGATAG i macFas5.chr19 T 12136 N 0 s chlSab2.chr6 47408456 202 + 50890351 CCAAACAGTGGGACTCAGACGGACGACAATGGCCACATTCAGGGGAGCCTCAGA---------TGGCCATGGGGGTGTcagccagagatactggatagaaaagacacagagcaaacatacagaaag------agacagacagacagagcgaggcagacagaTCACATCAGGACTTGGGGTGGTAACTGCAACCCTACATGAATCAGCTTGCAGACAG i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47768580 39262 + 51301725 T a score=437890.000000 s hg38.chr19_GL949753v2_alt 502981 850 + 796479 AGCACAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCGGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCGCCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTAGATGTTTTTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCTGGGACTCGCAGGATTTCCAAGCTAGATGACAACATGACAGGTGGAAACAGGCCCATTCCTTCGCCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTT---CGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA s panTro4.chr19 59741136 853 + 63644993 AGCGCAGGCCACATAAACCACTTCCCAGTCTTTGTACAGAAGCCCACCTGGGACACATGTAAACAGCATCAATGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGAATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAAGAGTGATTTCCACATGGGGGGCACAGATGCAACCATCGTTGGGGGAGCCCCAATGTCTCTTGATGGGAGGCATTTTCCACCCTGGACATCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCGGGACTCGCAGGATTTCCAAGCTAGATGATAACATGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCGGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTACAGACTTGCAGTGATTCTCCATCAGCATTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTCCTCCATGTTACTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGGGACCACCTAGGTGCTACTGGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653139 853 + 60714840 AGCACAGGCCACATAAACCACTTCCCAGTCTTCGTACAGAGGCCCACCTGGGATGCATCTAAACAGCATCAGTGCTGACTCAGGAGCATGAAAGGCCAGGCTCAGATTGGAAAGACTAGAGGTAGCATTGGCCGCCCACCATTGCCCATTTCCAGAAGCCCCCACCTCTCACCAAACAGTGATTTCCACGTGGGGGGCACAGATGCGACCATCGTTAGGGGAGCCCCAATGTCTCTTGATGGGATGCATTTTCCACCCTGGATGTCTCTTGCTCTCTCCACACCTTGGAGACTCAGTGGGGGAGTCTTCTCTGGGGACTCGGGGAGGGCCTCCCCGGGATTTGCAGGATTTCCAAGCTAGATGACAACGTGACAGGTGGAAACAGGCCCATTCCTTCACCAGGGGCCCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCATTGATCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGGCTGAGAAGGATCTGCCACTTCTCCGCTCAGTGGCCTCAAGCCAGACATCTTCCCTAAAGATTTCTGGTGATTCTCCATCAGCATTTAGAGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACCTTTCATTTCTGACCTTCCATAACTGAGTTCTCTTCCTAAATGTGGAATGCCTTGTACTTCATGTTATTCTCTCCCCAGAAAGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCCTTAGGGAGCAAGAGGAGAGGGAAAGAACAAAGTATGAGACCACCTAAGTGCTACTAGTTGAGGTTCCATTTGCCAGTGAAGGGACTTCACTCAGCCGAGGGGGCA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47408658 839 + 50890351 AGCACAGGCCACAAAAAACACTTCCCAGTCTTTGTACAGAGGCCTACATGGGACACATCTAAGCAGCATCAGTGCTGACTCAGCAGCATGAAAGGCCAGGCTCAGATTGGAAAGACAAGAGGTGGCATTGGCCGCCCACCATTCCCCATTTCCAGAAGCCCCCACATCTCACCAAAGAGTGATTTCCACGTGGGGGGCACAGATGTGACCATCGTTGGGGGAACCTCCATGTCTCTTGATGGGAGGCATTTTCCACCCTGGATGTCTCCTGCTCCCTCCACACCTTGGAGCCTCAGTGGGGGAGTCTTCTCTGAGGACTCGGGGAGGGCCT-CCTGGGACTCCCAGGATTTCCAAGCTAGATGACAACATGGCAGGTGGAAAGAGGTCCATTCCTCCATCCGGGGAGCCAAGCTCCATCCCAGGAGATGAGAAGAGGCTCTTCTCTTTGGTCAGTGGATCCCTGAGGGGACAGAGGCTCAGCACTGAAGACTGAGAAAGATGTGTCACTTCTCCACTCAGTGGCCTCAAGCCAGACATCTTCCCTGCAGACTTCCAGTGATTCTCCATCAGCTTTTAGGGCTGTGGCCACCAACCTGGGTGTTGGTCTGTAGGAACTTTTCATTTCTGACC-------------TTCTCTTCCTAAATGTGGAATGCCTTGTACTCCATATTATTCTCTCCCCAGAACGAATGTGTGGCTTGTCTGCTCTCCAGCCCTGTCATGGAGATTGATAATCTTTAGGGAGCAAGAGGAGAAGGAAAGAACAAAGTATGGAACGATCTAGGTGCTGCTGGCTGAGGTTCCATTTGCCAGTGAAGGGACTGCACTCAGCCAAGGCGGCA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47768580 39262 + 51301725 T a score=214316.000000 s hg38.chr19_GL949753v2_alt 503831 263 + 796479 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAGTAGAGAGAACTGAGCTCACCCAGTAAATGACCCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcatggccaggagtagacagcacggccaagctcctgggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgagtg--------------------aatga s panTro4.chr19 59741989 263 + 63644993 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGAATAGAGAGAACTGAGCTCACCCAGTAAATGACTCCTTCACTAactcattcatctaatatttatttcacacctaccatcagttctctctgtttcatggccaggagtaaacagcacggccaagctccttggttcatgatgctcacattgctgtggggtgggagagagaggcagaacatgaatgaatgaatgaatgagagaatgaatgaatgagtgaatgatggaatgag------------------------tga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56653992 263 + 60714840 ACTCAGGGAAGTCAGCCGAGGGAGGGAATTAGAGTAGAGACAACTGAGCTCACCCAGTAAATGACCCCTTCACTACCtcattcatctaatatttacttcacacctaccatcaattctctctgtttcatggccaggagtaaacagcacagccgagctccttggttcatgatgctcacattgctgtggggtgggagagagaGGCAGAAC----atgaatgaatgaatgagagaatggatgaatgagtgaatggatgaatgagtg--------------------aatga i ponAbe2.chr19 C 0 I 318 s papAnu2.chr19 47729318 283 + 51301725 aCTCAGGGAAGTCAGCCGAAGGAGGGCATTAGATTAGAGAGAACTGAGCTCACCCAGTAAATGACCTCTTCATTAACTCATTCATCTAATATTTATTTCACACCTACCATCAGTTATCTCTGTTGCATGGCCAGGAGTAAACAGTATGGCCAAGCTTCTTGGTTCATGATGCTCACATCGCTGTGGGGTGGGAGAAAGAGGCagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggaggaatgagtaaatgaatgaatgagtgagtgaatga i papAnu2.chr19 T 39262 C 0 s chlSab2.chr6 47409497 263 + 50890351 ACTCAGGGAAGTCAGCCGAGGGAGGGCATTAGATTAGACAGAACTGAGCTCACCCAGTAAATGACCTCTTCattaactcattcatctaatatttatttcacacctaccatcagttatctctgttgcatggccaggagtaaacagtgtggccaagttgcttggttcatgatgctcacattgctgtggggtgggagagagaggcagaac----atgaatgaatgaatgagcaaatgaatgaatgagtgaatggatgaatgagta--------------------aataa i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I a score=6235.000000 s hg38.chr19_GL949753v2_alt 504094 12 + 796479 atgaatgaatga s panTro4.chr19 59742252 12 + 63644993 atgaatgaatga i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47729601 12 + 51301725 atgaatgagtga i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47409760 12 + 50890351 atgaatgagtga i chlSab2.chr6 C 0 I 165 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I a score=2810.000000 s hg38.chr19_GL949753v2_alt 504106 13 + 796479 atgtatgaattag s panTro4.chr19 59742264 13 + 63644993 atgtatgaattag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47729629 13 + 51301725 ctggatgaattag i papAnu2.chr19 I 16 I 85 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I e chlSab2.chr6 47409772 165 + 50890351 I a score=69141.000000 s hg38.chr19_GL949753v2_alt 504119 132 + 796479 tgagtgaatccttagcacttggtgaaagtgccatgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc s panTro4.chr19 59742277 132 + 63644993 tgagtgaatccttagcacttggtgaaagtgccgtgcacagaatgaaatgaatgaacgtggaacgttgtcatttggagtgtacaggagggaacgtctcactgagacctcatcagagagatcacatttaaactc i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47729727 132 + 51301725 tgagtgaatcctCAGCACTTGGTGAAAGTGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTTGTCATTTGGAGTGTACAGGAGGGAACATCTCACTGAGAACTCACCAAGGAGATCACATTTAAACTC i papAnu2.chr19 I 85 C 0 s chlSab2.chr6 47409937 132 + 50890351 tgagtgaatCCTCAGCACTTGGTGAAAATGCCGTGCACAGAATGAAATGAAGGAACATGGAACGTCATCATTTGGAGTGTACAGGAGGGAACATCtcactgagaactcaccagggagatcacatttaaactc i chlSab2.chr6 I 165 C 0 e ponAbe2.chr19 56654255 318 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I a score=1772028.000000 s hg38.chr19_GL949753v2_alt 504251 2148 + 796479 cgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGAGAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgcgactcttcctccatgtatatttgcaggaatattactgggagtggttaagtgtaaactgattatatattcctggtaaatttaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatatagttataccacatttctaac----agtgattgcttggtatatttctacattgtttaatttcaaactccatgaattgttaacattgagatgtgtcctttgtaaaTTTCAAACAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTTTGTTATTATTACGTTGTGTTTTCCTGATTCCCTTTTTTTCCCACTGA---CTTCTGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCGTTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTACATATTTTTAAAATTGAAATTAATCATTTCAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGCATATTTAGTACATATGTTTGTATTTACTTATATGATGTTTTGTTTTGTGGTATACATAATTCTATCTTTTTCAGAAATTACACAGGGGCGTGTTTTCATACACTATCGtatggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcagaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagttctgtttctttcctgcgttgatcttggacagtaactgtactatgtaaggaattgtcggtggctggcgacggtatcttagctgggta-aagatgctattctactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatccttttcctctggctaattttaagggttggttgtgcttttatgctgcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatggatgtgtctacttcctccaaataatcaacaattgcctctttaaagattgcttctgacctgttttctcgttctttctttttggaactcaagttaggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttatttgctttttctgtgcattaatattgatggtttcctctgtcatagaggataaatactctcttcactgttgtgtACACAACATTTTAACTAGTTATTCTGGTTTAAATTTAATATTGACTTTATCTACATATCACAATTGATTACTGTGTACAGACTTTCttttctattagtataaatttatgaggtacacttgtaattttgtgacatgagtatgttgcagagtagtgaagtcaggacttttactatatccatcacccaaataccgtacattgtactcattaagcaaattctcatcactcacccacgtcccgccaccctccagccttct-agcctccgctgtccgtcattccacactctacgtccatatgtacacattactcccctcccatgtagagtgagaagatgtggtatttgtctttctgagtggttttatgtaaaataatggcgtccagctccatctatgtt s panTro4.chr19 59742409 2152 + 63644993 tgatcttagagacaagagggagtgagccctggggagtgtgttgaaaggaactttcatggacttaggacattggggatgaccctaatgtgagaatgagcttggtgtgttccaagaaGTCCATGGACCTGCCATATGGTGAGGGCTGGTCAGAATCCAGACAGATTTCtaaatgcccttgtgcttgtaaggaaagtgagtcctgtggttgggagtggacttataccttgggtcaggtccagcaattatctttctaaatcctctctaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggccgtggatttgcctacctgtccatttatttccgtgactcttcctccatgtatatttgcaggaatgttactgggagtggttaagtgtaaactgattatatattcctggtaaattaaaaatgctataaatttacctgcttttttcctacattttatgcttaatgttttccgctgatttttcccaaagactaattttgtctaattttaatatagttatgccacatttctaacagttagtgattgcttggtatattcctacattgtttaatttcaaactctgtgaattgttaagattgagatgtgtcctttgtaaaTTTCAAAAAATTCGCCTTAGAAAGTAAGACTTTCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAGTCATATTTTTGTTATTATTACGTTGTGTTTTCCTGATTCCCTTTTTTTCCCACTGA---CTTCTGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCGTTTAGGAATATATATATGGTGTACTCATCCTGAAGTTGTTACATATTTTTTAAATTGAAATTAATCATTTGAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGCATATTTAGTACGTATGTTTGTATTTACTTATATGATGTTTTGTTTTGTGGTATACATAATTCTATCTTTTTCAGAAATTACACAGGGGCATGTTTTCATACACTAttgtatggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcagaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagtgctgtttctttcctgcgttgatcttggacagtaactgtactatgtaaggaattgtcggtggctggcgacggtatcttagctgggta-aagatgctattcaactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatcctttccctctggctaattttaagggttggttgtgcttttatgctgcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatggatgtgtctacttcctccaaataatcaacaattgcctctttaaagattgcttctgacctgttttctcgttctttctttttggaactcaagttgggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttattttctttttctgtgcattaatattgacggtttcctctgtcatagaggataaatactctcttcactgttgtgtACACAACATTTTAACTAGTTATTCTGGTTTAAATTTAATATTGACTTTATCTACATATCACAATTGATTACTGTGTACAGACTTTCttttctattagtataaatttatgaggtacacttgtaattttgtgacatgagtatgttgcagagtggtgaagtcaggacttttactatatccatcacccaaataccgtacattgtactcattaagcaaattctcatcactcacccacgtcccgccaccctccagccttct-agcctccgctgtccgtcattccacactctacgtccatgtgtacacaatattcacctcccatgtagagtgagaagatgtggtatttgtctttctgagttgttttatgtaaaataatggcgtccagctccatctatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56654573 2152 + 60714840 CGATCTTAGAGACAAGAGGGAGTGAGCCCTGGGGAGTGTGTTGAAAGGAACTTTCACGGACTTAGGACATTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGgacctgctgtatggtgagggctggtcagaatccagtcagatttctaaatgtcttagtgcttataaggaatgtgagtcctgtggttgggagtggacttataccttgggtcaggtccaacaattatctttctaaatcctctccaattgcctgaaccacttctatcaacaactgagaaaagaggagtgttaaacaccccactgtggctgtggatttgcctacctgtccgtttatttccgcgacccttcctctatgtatatttgcaggaatgttgctgggagtggttaagtgtaaactgattatatattcctggtaaatcaaaaatactataaatatacctccttttttcctacattttatgcttaatgttttccactgatttttcccaaagactaattttgtctaattttaatatagttataccacatttctaacagttagtgattggttggtatatttccacattgtttaatttcaaactctgtgaattattaacattgagatatgtccttcataaaTTTCAAACAATTCGCCTTAGAAAATAAGACTTTCTGACAATCTTTGGTTTATGTTAGGGCAGTGTTTCCAATCAtatttttgtaattattacgttgtgtttccctgattccctttttttcccacagatttcttttgtggttttatatttcaagcattctattttttatctacatcatttaggaatacatatatggtgtgcctatcctgaagttgttacatattcttaaaattgaaattaatcatttcagagattaaactgcaaatataaaaacatatttccactcttcctgtgtaagaacaggattttagagcatatttagtacatatgtttgtatttacttatatgatgttttgttttgtggtatatataattccatctttttcagaaattacacaggggcatgttttcatacactattgtacggtccatattcatttttggcatagccatatttttagttcttcctctgctcttagttattgtcacaatcttcgacaccccatctggtttcactttctttatctttgaggcacggtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttgtctttcagttctgtttctttcctgcgttgatctcggacagtaactgtactatgtaaggaattgtcggtggcaggtgacggtatcttagctgggtg-aagatgctattctactggcttatgttttcc-ttttttctgtggggaagacaatgcttggctccctataaatccttaccagctgatccttttcctctggctaattttaagggttggttatgcttttatgcagcttttctgtaatgttgaacgtgaggtgtgtttacttcattctgcctggcattcactggatttcttgaacctgtggattgatgtatgtgtatacttcctccaaataatcaacaattgcctctttaaagattgcttctaacctgttttctcgttctttctttttggaactcaagttaggagcattctaaaactgttgtcaatttttaccctgtcacaaaactgctctttcttgtttcagttattttctttttctgtgcattaatattgacagtttcctctgacgtaGATG----ATATTCTCTTCACTGTTGTGTACACAACATTTTAACTAGTTATTCTGGTTTAAATTGAATATTGACTTTATCTACATATCATGATTGATTACTGTGTACAGACTTTCttttctatttgtataaatttatgaggtacacgtgtaattttgtgacatgggtatattgcacagtggtgaagtcaggacctttactatatccatcacccaaatactgtacattgtactcattaagcaaattctcattactcacccacgtcctgccaccctccagccttccaagcctctgctgtccgtcattccacactctacgtccatgtgtacacattactcccctcccacgtagagtgagaagatgtggtatttgtctttctgagttgttttatgtaaaataatggcatccagctccatctatgtt i ponAbe2.chr19 I 318 C 0 s papAnu2.chr19 47729859 2140 + 51301725 TGATCTTAGAGACAAGAGGGAAGAAGCCCTGGGGAGTGTGTTGAAAGGAATTTTCATGTACTTAGGACGCTGGGGATGACCCTAATGTGAGAATGAGCTTGGTGTGTTCCAAGAAGTCCATGGACCTGCCGTATGGTGAGGGCTCCTCAGAATCCAGTGAGATTTCTAGATGTCCTTGTGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGGACTCGTACCTTAGGTCAAGTCCAGCAATTCTCTTTCTAAATCCTCTCTAACTGCCTGAACCACTTCTATCAACAACTGAG---AGAAGAGTGTTAAACACCCCACTGTGGCCGTGGATTTGCCTACCTCTCCATTTACTTCAGTGACACTTCCTCCATGTATATTTGCAGGAATATTACTAGGAGTGATTAAGTGTAAATTGATTATATATTCCTgctaaattaaaaatactataaatttaCCTGCTTTTTCCCTAAATTTTATGCTTAATGTTTTCCACTGATTTTTCCCAAAGACttattttgtctaattttattATAACTACACCACATTTCCAACAGTTAGTGATTGCTTGGTATATTTCtacattgtttaatttcaaaCCCTGTGAATTGTTAACACTGACATGTGTCCTTTGTAAATTTC-AACAACGCACCTTAGAAAACAAGACTTGCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTGTGTTATTATTATGTTGTGTTTTCCTGACTCCC--TTTTTCCCACGGACTTCTTTGGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTTGTTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTacgtatttttaaaactgaaattcatCATTTCAGAGATTAAACtgcaaatataaaaacatatttccacTCTTCCTGTGTAAGAACAGGATTTTAGAGTGTATTTATTACATATGTTTGTATTTACTTACATGA-----TGTTTTGTGGTATATATAATTCTATCTTTTCCAGAAATTACACAGGGGCATGTTTTCATACACGACTGTATGGTCCATATTCATTTTTGGCATAGCcatattttaagttctttctCTGCTCTTAGTTATCGTCAGAATCTTCGACACCCAATCTGGtttcactttccttctctttgaGACACAGTCATCAGAATTTCCTTTAGGGTCAGTGAGAAAAGCTTTCTTTGCCCTTTTATCTTTCAGTGCTGTTTCTTTCCTGTGTTGATCTCGGACA------GTACTATGTAAGGAATTGTCGGTGGCTGGTGATGGTATCTTAGCTGGGTACAAGATGCTGTTCTACTggcttatgttttcctttttttctgtgggGAAAACAATGCTTGGCTCCCTTTGAATCCTTACCAGCTGATCCTTTTCCTCCGGCTAAGCTGAAGGGTTGGTTATGCTTTTATGCAGCTTTTCTGTAACGTTGAACATGAGGTGTGTTTAATTCATTCTGCCTGGCATTCACTGCATTTCTTGAACCTATGGATTGATGGATGTGTCTACTTCCTCCAAATAATCAACAATTGCTTCTTTGAAGATTGCTTCTGAcctgttttctcattctttccttttggAACTCAAGTTAGGAGCATTCTAAAACGGTTGTCAGTTTTTACCCTGTCACAAAACtgctctttctt-tttcagttgttttctttttctgtgcactAATATTGACAGTTTCCTGTGGCGTAGATGATAAATGCTCTCTTCACTGTTGTGTACCCAATATTTTAACTAATTATTCTGCTTTAAATTTAATGTTGACTATATCTAGATATCACAATTGATTACTGTGTACagactttcttttctatttgtatacatttatggggtacacgtGTAACTTTGTGACATGAATATATTGCAGAGTGGTGAAGTCAGGACTTCGACTATATCCATCACCCAAATGCTGTACATTGTACTCGTTAAGCAATTTCTCATCACACACCCAGGTCCCACCGCCCTCCAGCCTTCCAAGCCTCCACTGTCCGTCATTCCACACTCTACGTCCAGGTGTATGCACCACTCGCCTCCCGCTTAGAGTGAGAAgatgtggtgtttgtctttctgagttgtttcacgtaaaataatggcctccagttccatccacgtt i papAnu2.chr19 C 0 I 1725 s chlSab2.chr6 47410069 2139 + 50890351 tgatcttagagacaagagggaataggccctggggagtgtgttgaaaggaagtttcatgtacttaggacactggggatgaccctaatgtgagaatgggcttggtgtgctccaagaaGTCCATGGACCTGCCGTATGGTAAGGGCTGCTCAGAATCCAGTGAGATTTCTAAGTGTCCTTGGGCTTGTAAGGAGTGTGAGTCCTGTGGTTGCAAGTGAACTTGTACCTGAAGTCAAGTCCAGCAATTCTCTTTCCAAATCCTCTCTAACTGCCTGAACCACttctatcaacaactgag---agaagagtgttaaacaccccactgtggccgtggatgtgcctacctctccatttacttcagcgacacttcctccatgtatatttgcaggaatattactgggagtgattaagtgtaaattgattatatattcctggtaaattaaaaatactataaatttacctgtttttttcctaaattttatgcttaatgttttccactgatttttcccaaaggcttattttgtctaattttattataactacaccacatttccaacagttagtgattgcttggtatatttctacattgtttaatttcaaaccctgtgaattgttaacactgacttgtgtcctttgtaaaTTTC-AACAACACACCTTAGAAAACAAGATTTGCTGACAATCTTTTGTTCATGTTTGAGCAGTTCTTCCAATCATATTTGTGTTATTATTATGTTGTGTTTTCCTGATTCCC--TTTTTCCCATGGACTTCTTTGGTGGTTTTCTATTTCAAACATTCTATTTTTGATCTATGTCATTTAGGAATACATATATGGTGTACTCATCCTGAAGTTGTTACGTATTTTTAAAACTGAAATTCATCATTTCAGAGATTAAACTGCAAATATAAAAACATATTTCCACTCTTCCTGTGTAAGAACAGGATTTTAGAGTATATTTATTATATATGTTTGTATTTACTTGCATGA-----TGTTTTGTGGTATATATAATTCCATCTTTTCCAGAAATTACACAGGGGCATGTTTTCATACACTACtgtatggtccgtattcatttttggcatagccatattttaagttctttttctgctcttagttattgtcagaatctttaacaccccatctggtttcactttccttctctttgaggcacagtcatcagaatttcctttagggtcagtgagaaaagctttctttgcccttttatctttcagtgctgtttctttcccgtgttgatctcggaca------gtactatgtaaggaattgttggtggctggtgatggtatcttagctgggta-aagatgctgttctactggcttatgttttcctttttttctgtggggaagacaatgcttggctccctatgaatccttaccagctgatccttttcctccggctaagtttaagggttggttctgcttttatgcagtttttctgtaacgttgaacgtgaggtgtgtttaattcattctgcctggcattcactgcatttctcgaacccatggattgatggatgtgtctatgtccatcaaataatcaacaatggcctctttaaagattgcttctgacctgttttctcattctttccttttggaactcaagttaggagcattctaaaactgttgtcagtttttaccctgtcacaaaactgctctttctt-tttcagttattttctttttctgtgccttaatattgacagtttcctgtggtgtagatgataaatactctcttcactgttgtgtacacaatattttaactaattattctgctttaaatttaatgttgactatatctAGATATCACAATTGATTACTGTGTACAGACTTTCttttctatttgtatacatttatggggtacacgtgtaactttgtgacatgaatatattgcagagtggtgaagtcaggactttgactatatccatcacccaaatgctgtacattgtactcgttaagcaatttctcatcacgcatccaggtcccaccgccctccagccttccaagcctccaccgtccgtcattccacactctacatccaggtgtgtgcactactcgcctcccgcatagagtgagaagatgtggtgtttgtctttctgagttgtttcacgtaaaataatggcctccagttccatccatgtt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I a score=147795.000000 s hg38.chr19_GL949753v2_alt 506399 319 + 796479 gctgcaaaagacatggtttta-tttttatgaccaaatagtatttcgttgtgtatacacgcatcctttttttaatccaatcattcattcacagacacttagattgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcaggtattt------------------------tttgagtagatacccagcagcgggacccctagatcgaatggtgcttctatttttggttctctgccaaatttc--catactgtcttccatagaggctatactaatttacataccggccaacagtgtataagagtttccttttctctgcatccttgccaaca s panTro4.chr19 59744561 319 + 63644993 gctgcaaaagacatggtatta-tttttatgaccaaatagtatttcgttgtgtatacacgcatccttttttaaatccaatcattcattcacagacacttagattgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcaggtattt------------------------tttgagtagatacccagcagcgggacccctagatcgaatggtgtttctatttttggttctctgccaaatttc--catactgtcttccatagaggctatactaatttacataccggccaacagtgtataagagtttccttttctctgcatccttgccaaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56656725 320 + 60714840 gctgcaaaagacatggttttattttttatgaccaaatagtatttcgttgtgtatacacgcatccttttttaaatccaatcattcattcacagacacttagactgatttcatatctttgc---tattgcaaacagtgctgcaataaacatacaggtgcaggtattt------------------------tttgagtagatacccagcagtgggaaccctagatcgaatggtgtttctatttttggttctctgccaaatctc--catactgtcttccatagaggctgtactaatttacgtaccggccaacagtgtataagagtttccttttctctgcatccttgccaaca i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47412208 349 + 50890351 actccaaatgacaggattttatattttatggccaaatactatttcattgttgatacacaccacactttattaatccaatcgttctctcacagtcacttagattgattccatgtctttgctgttgttgcaaacagtgctgcaataaacatacaggtgcaggtatttgtttgacataagtgctgcttctcctttgggtagacaccccacagtgggagcgctaggtcgaatggtgtttctattcttggttctctgacagatctcctcatgctgtcttccacagaggctatactaatttacattctgacccacagtgtataagagtttccttttctctgcttccttgccaaca i chlSab2.chr6 C 0 I 16 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47731999 1725 + 51301725 I a score=81729.000000 s hg38.chr19_GL949753v2_alt 506718 318 + 796479 cctgttatatgtttcactttttc----tttttttctttttgagatggagtcttccactgtcacccaggctggagtgcagtgccgccatctccacgcgctgcaacctccaccaaccaggttcaaatgattctcctgcctcagcctcctgagtagctgggattacagaaccacaccaccatgcccagctaatcttttgtatatttagtagagatggggtttcactatgttggtcaggctggtctcaaactcctgacctcatgatccacccgcctcagcttcccaaagtgctgggattacaagcgtgagccaccactccccacca s panTro4.chr19 59744880 318 + 63644993 cctgttatatgtttcactttttc----tttttttctttttgagatggagtcttccactgtcacccagcctggagtgcagtggcgccatctccacgcgctgcaacctccaccacccgggttcaaatgattctcctgcctcagcctcctgagtagctgggattacagaaccactccaccacgcccagctaatcttttgtatatttagtacagacggggtttcactatgttggtcaggctggtctcaaactcctgacctcatgatccacccgcctcagcatcccaaagtgctgggattacaggcgtgagccaccactccccacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56657045 322 + 60714840 cctgttatatgtttcactttttctttttttttttttttttgagattgagtcttccactgtcgcccaggctggagtgcagtggcaccatctccacgtgctgcaacctccaccaaccgggttcgaatgattctcctgcctcagcctcctgagtagctgggattacagaaccacaccaccacgcccagctaatcgtttgtatatttagtagagacggggtttcactatgttggtcaggctggtcttgaactcctgacctcctgatccaccggcctcaccctcccaaagtgctgggattacaggtgtgagccactgctccccacca i ponAbe2.chr19 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e chlSab2.chr6 47412557 16 + 50890351 I e papAnu2.chr19 47731999 1725 + 51301725 I a score=337000.000000 s hg38.chr19_GL949753v2_alt 507036 703 + 796479 gcatttttagtaatagccattctgactactgtaagatgatatctcattgtggtttcaatttgcatttctctgatgattagtga-----------tgttcatacgctgtttggccattcgtatgtcttcttttgaaaaatgtctatgtatatccctttgcccactttttaatgctattatttgaggggttatgtttagttgtttgagttgcctagaaattctggatgttagtcctctgttgggtgcatagtttgcaaacatttccattcattctgtgggttgtctgttcaccctgctactatttcctttgcttggcagaagctctttcgtttattaagtcccattggtctagttttatttttattgcctgtgcttttgaggtcttagtgatgaattctttgcccagaccaatgcccagaagagtttctctttgggtttccaccggtgattttatagttctggatttacatttaagctgctaattaccttaagttaatttatgtgtatgattacagatacaggtccagttttattcttctgcatatggctatttagttttcccagcaccttttattgaaaaggaaatctttctccagtgtatgttttgttaacgtcgtcaatgattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctgtgtctataccagcactgtgctattt s panTro4.chr19 59745198 714 + 63644993 gcatttttagtaatagccattctgactactgtaagatgatatctctttgtggtttcaatttgcatttctctgatgattagtgatgttggacatttgttcatatgctgtttggccattcgtatgtcttcttttgaaaaatgtctgtgtatatccctttgcccactttttaatgttattatttgaggggttatgtttagttgtttgagttgcctagaaattctggatgttagtccccggttgagtgcatagtttgcaaacatttccattcattctgtgggttgtctgttcaccctgctactatttcctttgcttggcagaagctcttttgtttattaagtcccgttggtctagttttatttttattgcctgtgcttttgaggtcttagtgatgaattctttgcccagaccaatgcccagaagagtttctctttgggtttccaccagtgattttatagttctggatttacatttaagctgctaattaccttaagttaatttatgtgtataatgacagatacaggtccagttttattcttctgcatatggctatttagttttcccagcaccttttattgaaaaggaaatctttctccagtgtatgttttgttaacgtagtcaatgattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctgtgtctataccagcactgtgctattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56657367 711 + 60714840 gcatttttaataatagccattctgactactgtaagatgatatctcattgtggtttcaatttgcatttctctgatgactagtgatgttgaacatttgttcgtatgctgtttggccagtcgtatgtcatcttctgaaaaatgtgtatgaatatccctttgcccactttttaatgctattatttgaggggtta-gtttagttgtttgagttgcctagaaattctggatgttagttccctgttggatgcatagtttgcaaacattttctttcattctgcaggttgcctgttcactctgctattatttcctttgctgggcaggagctctttcatttattaagtcctgttggtctagttttatttttattgcctgggcttttgaggtcttagtgatgaattctttgcctagagcaatgtccagaagagtttctctttgggtttccactggtgattttatagttctgtttttgcatttaagctgttaatta--ttaagttaatttttgtgtataatgacagatatgggtccagttttattcttctgcatatggctatttagttttcccagcaacatttattcaaaaggatatctttccccagtgtatgttttgttgactttgtcaaagattattcactgtagatatgaggctgtatttctgggctctctattctggtctattgatctctgtttctatgtctataccagcaccgtgctattt i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47412573 713 + 50890351 gcattttcagtaatagccattctgactactgtaagatgatatctcgttgtggtttcaatttgcatttctctgatgagtcgcgatgctgaacacttgttcatatgctgtttggccattcgtatgtcttcttttgaaaaatctgtgtaaacatccctttgcccactttttaatgctattatctga-gagctgtgattagttgtttgagttgcctagaaattgtggatgttagtcccctgtcggatgcacagtttgcaaacattttcgttcattctgcaggtcgtcggttcactctgctattatttcctttgctgttcagaagttttttcgtttactaagtcccatttgtctagttttatttttgttgcctgtggttttgaggttttactgatgaattctttgcctagaccaatgtccaggagagtttctctttgcatttccacctgtgattttatagttctgggtttacatttaagccgttaattatcttacattaatttttgtgtataatgacaggtatgagtccagttttattcttctgcctatgactatttagatttctcagcactatttatggaaaagcatatctttccccagtgtatgttttgttgactttgtccatgatcattcactgtagatacgaggctgtatttttgggctctctattctggtctattgatctctgtttctgggtctataccagcaccgagctgttt i chlSab2.chr6 I 16 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47731999 1725 + 51301725 I a score=158289.000000 s hg38.chr19_GL949753v2_alt 507739 195 + 796479 aagttactatagccttagagcatagtttgaagtcagatagcgtgatgcctccaggtttctacattcacctagaattgctttctctattaggatcttttttggttctgtatgaattttaggattgctttttctaattctgtgaaagctggtgttactattttcatataagaattgcactgaatctgtagattgctt s panTro4.chr19 59745912 195 + 63644993 aagttactatagccttagagcatagtttgaagtcagatagcgtgatgcctccaggtttctacattcacctagaattgctttctctattaggatcttttttggttctgtatgaattttaggattgctttttctaattctgtgaaaactggtgttactattttcatataagaattgcactgaatctgtagattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56658078 195 + 60714840 cagttactatagccttagagcatagattgaagtcagatagcgtgatgcctccaggtttctacatttccctagaattgctttgtctattaggattttttttggttctgtatgaattttaggattgctttttctaattctgtgaaaactggtgttactattttcatataagaattgcactgaatctgtagattgctt i ponAbe2.chr19 C 0 I 2787 s papAnu2.chr19 47733724 192 + 51301725 aagttactatacCCTTagagcataatttgaagtcagagagCCTGATGACTCCAAGTTTCTATACTTGCCTAGAATTGCTTTGTCTAtgaggctcttttttggttctgtatgaactttaggattgctttttctaattctgtgagaccTGGTGTTACTATTTTCATTTAAGAATTGcactaaatctgtagattg--- i papAnu2.chr19 I 1725 C 0 s chlSab2.chr6 47413286 195 + 50890351 aagttactatatccttagagcataatttgaagtcagagagcctgatgactccaagtttctacatttgcctagaattgctttgtctattaggctctttttaggttttgtatggattttaggattgctttttctaattctgtgagacctggtgttactattttcatttaagaattgcactgaatctgtagattgctt i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I a score=273.000000 s hg38.chr19_GL949753v2_alt 507934 1 + 796479 t s panTro4.chr19 59746107 1 + 63644993 t i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47413481 1 + 50890351 t i chlSab2.chr6 C 0 C 0 e ponAbe2.chr19 56658273 2787 + 60714840 I e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47733916 0 + 51301725 C a score=745039.000000 s hg38.chr19_GL949753v2_alt 507935 932 + 796479 aggcagtatggtcattttaacaatattaattcttatgatccatgagcgtgggattttttttcttttttttttttgtattatctataattgctttcattggtgtcttacacctttcctggtacagctctttcaccaccttggttaaatgtattcctgagtgttttaattttgcgtatctattgtaaacggcattgccttcttgatttggttctcagctagatcattataggtgtagagaaatgctactggcttttacatattgattttgtattctgaaactttacttagttcatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttaattcttcctgttgcccaatagctctgacaaggcttccagtactatgttgataggaagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctagatatgtcatctatggcttttattattttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaatttctttt-cagatgcttttctttatgtctattgagatgatcatatggtttttgttctggattctgctCGTTCttctaagtggatgagacatgccagaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCTTTCTTACCAGTGTTTTCAATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTATGCTTCCTTTCCTTGTATGCATAACCTACCCAGCAATACACACA s panTro4.chr19 59746108 930 + 63644993 aggcagtatggtcattttaacaatattaattcttatgatccatgagcgtgggattttttttc--ttttttttttgtattatctataattgctttcattggtgtcttacacctttcctggtacagatctttcaccaccttggttaaatgtattcctgagtgttttaattttgcgtatctattgtaaacggcattgccttcttgatttggttctcagctagatcattataggtgtagagaaatgctactggcttttacatattgattttgtattctgaaactttacttagttcatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttacttcttcctgttgcccgatagctctgacaaggcttccagtactatactgataggaagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctagatatgtcatctatggcttttattattttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaatttttttt-cagatgcttttctttatgtctattgagatgatcatatggtttttgttctggattctgctCGTTCttctaagtggatgagacatgccagaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCTTTCTTACCAGTGTTTTCAATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTATGCTTCCTTTCCTTGTATGCATAACCTACACAGCAATACACACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661060 927 + 60714840 aggcagtatggtcattttaacaacattaattcttatgatccgtgagcgtggaattttttttc----ttttttttgtgttatctataattgctttcattggtgtcttaca-ttttcctggtagagatctttcactaccttggttaaatatattcctgagtgttttaattttgcgtatctattgtaaacgggattgccttcttgatttggttctcagctagatcattataggtgtaaagaaatgctaccggtttttatgcattgattttgtattctgaaactttacttagttgatttatcaatcataagaatttttggcagggtctttaggattttctagatttaagatcatagcatcagaaataaaaataattttacttcctcttttctaatttggat---ttttacttcttcctgttgcccgatagctctgacaaggcttccagtactatgttgatagagagtggtggatgtccgtgtccttgtcttgtgccagttctcagagg------agtgcttttaactttt-cctgttcagtatgatgttgactctaggtttctcatctatggcttttattactttgaggtatgttctttctatgcctaagtttttgagggttttcatcaggtaaggatgttgaattttttttacagatgcttttctttatgtctattgagatgaccatatggtttttgttctagattctgctcatTCttctaagtggatgagacatgccgaaaaagcatttagtcagccatcttggaaacaaGCATCTCAGATGTTTTCTTTCTCTATAGCTCATTCCTTCTTACCAGTGTTTTCAATTTTCTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCAGACTCACTCTGCTTCCTTTCCTTGTATGCATAACCTGCACAGC-ATACACACA i ponAbe2.chr19 I 2787 C 0 s papAnu2.chr19 47733916 927 + 51301725 ------------cattttaacaatattaattgctatgatccatgagcgtggaatttcttttc-tttttttttttgtatcatcTATAATTGCTTTCATGGGTGTCTTACACTCTCCctggtagagatctttcaccaccttggttaaatgtattcctcaGTGTTTTACTTTTGTGTATCTATTGTAAATGG-GttgccttcttgatttggttctcagttaGATCATTATAGGTGTGGAGAAATGCTGTCGggttttacacattgattttgtactctgaaactttactgagttCATTTTTCAATCATAAGAATTTTT-TCAGAgtccttaggattttctagaCTTAAGATCATAGCATCAGCAATAGAAATAATTGCACTTCCTCTTTTCTAGTTtagttatgttttatttcttcctgtggcCTGAGAGCTCTGACAGggcttccagtactgtgttgataGGGAGTGGTGGATGTCTGTGTCCTTGTGTTGTGCCAGTTCTCAGAGGAGTCAGAGTCATGTTAACTTTTCCCTgctcagtatgatgttgactttAGGTATGTCATctatggcttttattactttgaggtatatTCTTTCTATGCCTAATTTTTTGAGGGTTTTCATCAGGTAAGGacgttgaattttttta-aagatgcttttCTTTatgtctgttgagatgatcacatgTTTTTGGTTCTGGATTTGGCTCATTCTTCCAGGTGGATGACATATGCCAAAAAAGCACttagtcagccatcttggaaaCAAGCATCtcagatgttttctttctctacagGTCATTCTTCCTTACCAGTGTTTTCCATTTTGTACTTAATTTTGTAAAGAGAGTAAATGATATAATTTCCACATATGTTTCCTCTGCCAAATCTGACTCACTGTGCTTTCTTTCCTTGTATGCATAACCTGCCCAGCAATACACACA i papAnu2.chr19 C 0 I 165 s chlSab2.chr6 47413482 933 + 50890351 aggcaatatgatcattttaacaatattaattcctatgatccatgagcatggaattttttttc-----ttttcttgtatcatctataattgctttcatgggtgtcttacactcttcctggtagagatctttcactaccttggttaaatgtattcctcagtgttttacttttgtgtatctattgtaaatgg-gttgccttcttgatttggttctcagttaaatcattattggtgtagagaaatgctactgggttttacacactgattttgtattctgaaacttcactgagttcatatttcaatcataagaattttt-tcagagtctttaggattttctagatttaagatcatagcatcagcaatagaaataattgcacttcctcttttctaacttagatatgttttatatcttcctgtggcctgatagctttgacagggcttccagtactgtgttgatagggagtggtggatatctgtgtccttgtcttgtgccagttctcagaggagtc--agtcattttaacttttccctactcagtatgatgttgactctaggtatgtcatctacggcttttattactttgaggtatattctttctatgcctaatttattgagggttttcatcaggtaaggacgttgaattttttta-aagatgctttcctttttgtctattgagatgatcacatgtttttggttctggattcggcttatTCTTCCAGGTGGATGAGATATGCCAAAAAAGCATTTAGTCAGCCATCTTGGAAACAAGCATCTCAGATGTTTTCTTTCTCTACAGCTCATTCTTCCTTACCAGAGTTTTCAATTTTGTACTTAATTTTATAAAGAGAGTAAATAATATAATTTCCACGTATGTTTCCTCTGCCAAATCTGACTCACTGTGCTTTCTTTCCTTGTATGCATAACCTGCCCAGCAATACACACA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I a score=2238.000000 s hg38.chr19_GL949753v2_alt 508867 4 + 796479 AACA s panTro4.chr19 59747038 4 + 63644993 AACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661987 4 + 60714840 AACA i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47414415 4 + 50890351 AACA i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I e papAnu2.chr19 47734843 165 + 51301725 I a score=218667.000000 s hg38.chr19_GL949753v2_alt 508871 259 + 796479 TTTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAA-AAAAATGTATATCTTCAAAAGAAATTTCTTTTTGTGGCAAAAGACTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGAGAGGGGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCCCACCCTCCAGCCCCTGTTCT s panTro4.chr19 59747042 259 + 63644993 TTTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAG-AAAAATGTATATCTTCAAAAGAAATTTCTTTTTGTGGCAAAAGACTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGAGAGGGGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCCCACCCTCCAGCCCCTGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56661991 260 + 60714840 TCTATTGCTTTGGAGAATTAGTTTGGGAACATTTTTGAAATGT------ACAGAAAAAATGTATATCTTCAAAAGAAATTTCTGTTTGTGGCAAAAGGCTTCTGAAGGTGCTCATGATGATATAGGGAGAAGAGGGGTTCTGGACAGGAAGAATTTTATGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTTCTGGGGAGGGAGGCGCCTGGCCCACATGGAAAGGTCTCTGATCTTACCCTCACCCTCCAGCCCCTGTTCT i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47735008 265 + 51301725 tttattgCTTTGGAGAATTAGTTTGGGaatgattttgaaatgtaaaaaaaaaa-aaaaaagtgtatcttcaaaagaaatttctgtttGTGGCAAAAGGCTTCTGAAGGTGCTCAGGATGATATAGGGAGAAGAGGGGATCCGGACAGGAAGAATTTTGTGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGctcctggggagggaggggcctAGCCCACATGGAAAAGTCTCTGATCTtacccccaccctccagcccctgTTCT i papAnu2.chr19 I 165 C 0 s chlSab2.chr6 47414419 259 + 50890351 TTTATTGCTTTGGAGAAT--GTTTGGGAACTATTTTGAAATGT----AAAAAA-CAAAATGTGTATCTTCAAAAGAAATTTCTGTTTGTGGCAAAAGGCTTCTGTAGGTGCTCAGGATGATATAGGGAGAAGAGGGGTTCCGGACAGGAAGAATTTTGTGAAGGTGAGATGGGGAAATAGCTCCATTTCAGAGCTCCTGGGGAGGGAGGGGCCTAGCCCACATGGAAAAGTCTCTGATCTTACCCCCACCCTCCAGCCCCTATTCT i chlSab2.chr6 C 0 C 0 e calJac3.chr22 45772694 91198 + 49145316 I a score=156231.000000 s hg38.chr19_GL949753v2_alt 509130 153 + 796479 CCAGAACTATACTGTGGAGAGTTCCATCAGGATTGTTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTGGAGACATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG s panTro4.chr19 59747301 153 + 63644993 CCAGAACTATACTGTGGAGAGTTCCATCAGGATTGTTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTGGAGCCATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56662251 153 + 60714840 CCAGGACTATACTGTGGAGAATTCCATCAGGATGGTTGTGGTCGGTCTGGTCTTCCTGGCACTTTTGGCAATGCTGGCTAAGACCTGGTGGAGCCATGAGGGGCCACAGGTGGAAATGGAAGA-------AACATGACTGAAGCTGGCTGGAGTGAATGG i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47735273 153 + 51301725 CCAGGACTATACTGTGGAGAATTCCATCAGAATGGCTGTGGCTGGTCTGGTCTTCCTGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTTCAGCCATGCGGGGACACAGGTGGAAATGGAAGA-------AACGTGACTGAAGCTGGCAGGAGTGAATGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47414678 153 + 50890351 CCAGGACTGTACTGTGGAGAATTCCATCAGAATGGCTGTGGCTGGTCTGGTCTTGCAGGCTCTTTTGGCAATGCTGGCTAAGACCTGGTTCAGCCATGCGGGGACACAGGTGGAAATGGAAGA-------AACGTGACTGAAGCTGGCTGGAGTGAACGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45863892 154 + 49145316 CCAAGATCACACGGTGCAGAACCTGATCCGCATGGCCGTGGCAGGACTGGTCCTCATGGCTCTCTTGGCCATACTGGCTGAAAACTGGTACAGCCATAGGGCGT------TAGGCAAGGAAGCCTCGGCTGACGTGGCTGAACTGAGCTGGAGCAAGCGG i calJac3.chr22 I 91198 N 0 a score=1100.000000 s hg38.chr19_GL949753v2_alt 509283 2 + 796479 CG s panTro4.chr19 59747454 2 + 63644993 GG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56662404 2 + 60714840 CG i ponAbe2.chr19 C 0 I 1302 s papAnu2.chr19 47735426 2 + 51301725 CG i papAnu2.chr19 C 0 I 1325 s chlSab2.chr6 47414831 2 + 50890351 CG i chlSab2.chr6 C 0 I 1318 a score=100.000000 s hg38.chr19_GL949753v2_alt 509285 1 + 796479 C s panTro4.chr19 59747456 1 + 63644993 C i panTro4.chr19 C 0 C 0 e ponAbe2.chr19 56662406 1302 + 60714840 I e chlSab2.chr6 47414833 1318 + 50890351 I e papAnu2.chr19 47735428 1325 + 51301725 I a score=98224.000000 s hg38.chr19_GL949753v2_alt 509286 121 + 796479 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCAAGTGTGTTGTATCAGCTGTGACTTTTAGTAATGTTCTTG--------------CTACCACAATATCCACTCGTCCATCCCGAATAATTGTGATGAAA s panTro4.chr19 59747457 121 + 63644993 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCAAGTGTTTTGTATCAGCTGTGACTTTTAGTGATGTTCTTG--------------CTACCACAATATCCACTCGTCCATCCCGAATAATTGTGACGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56663708 121 + 60714840 GACATTCTGTCGGTGGGAGGTTGGCCAGATGGGTTTCAAGTGTGTTGTATCAGCTGTGACTTTTTGTAATGTTCTTG--------------CTACCACAATATCCACTCATCCATCCCGAATAATTGTGAGGAAA i ponAbe2.chr19 I 1302 C 0 s papAnu2.chr19 47736753 134 + 51301725 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCCAGTGTGTTGTATCAGCTGTGAC-TTTTTTCATGTTCTTGCCACATTTCATGTTCTACCACAATATCCACTAGTCCATCCCGAATAATTGTGAGGAAA i papAnu2.chr19 I 1325 C 0 s chlSab2.chr6 47416151 121 + 50890351 GACATTCTGTCTGTGGGAGATTGGCCAGATGGGTTTCCAGTGTGTTGTATCAGCTGTGACTTTTTTTCATGTCCTTG--------------CTACCACAATATCCACTAGTCCATCCCGAATAATTGTGAGGAAA i chlSab2.chr6 I 1318 N 0 a score=3043.000000 s hg38.chr19_GL949753v2_alt 509407 8 + 796479 TATTGTCC s panTro4.chr19 59747578 8 + 63644993 TATTGTCC i panTro4.chr19 C 0 I 71072 s ponAbe2.chr19 56663829 8 + 60714840 CATTGTCC i ponAbe2.chr19 C 0 N 0 s papAnu2.chr19 47736887 8 + 51301725 CTCTGTCC i papAnu2.chr19 C 0 N 0 a score=0.000000 s hg38.chr19_GL949753v2_alt 509415 100000 + 796479 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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 e panTro4.chr19 59747586 71072 + 63644993 I a score=201405.000000 s hg38.chr19_GL949753v2_alt 609415 2231 + 796479 aagctttgcggcagtacagcccaggtaatttgctgagcttgatcggtgtcagggtcagtccaagtgaaagcgaagagaggctgggatgaagggtgcaaaggaatagtaaagaaagcacgtttgagatccagaacagaataatgggttgtagaggcaggtattgaggataggagagtatatgggtttggcactacggggtggataggcaaaacaatttggttgataaggcgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggagaattgtaaggggagtttataggctttaaaaggccatgctgtagcaggctttaatccttttaaagcgtgctgcggaatgggatattggcgttgagtggggtaagggtgattaggttttaatgagatggtaaggggtgcatgatcggtcaccaaggagggagtagaggtatcctatacttgtgggttaaggtggggggatgcaagaggaggaagcaaaggaggctttggattgggaagaatggcagcaatgagatatagctgtagtccaggaacagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactgaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacgggcttaccttccactgtgagagttacctagactgt----gatggtcctgtaggcttctgaggcgatcgggatcgggcagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggatgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaacccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggatactggagtggaggcaaggaattgcaactcagaaatatgttgctatttggctgcctctactctattactgtacaccttgaaggcgaggttaattaagtcttgttgtggggtttgagggacagaatttaatttttggagctttatttaatgttgggagcagatttggtaataaaatgtatattgagaataagacggccttttgacttagggtctagggctgtaaagcgtctcagggttgctgccaaatgagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagcttcagccacctttttaagaggaaattgctgggcagttgggggagggctagtcatggaatggaactgtaagctggaccgggtgtgaggaggggaggtgataaaaggattatagggtggaggagcggaggctgaggaagaattgggacccagctcggcctggcgaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggacgagttgcactgggcatagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggcacctcagaccatttgcccattttacaacaagaattatttagatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcaagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggctaagggagaagaaggaggaatggagggtggaaggttgcccatactgaaggaggcaagcacagagaaaagagagagtagagacatggagggaaggggttcaggggttcttaccttccagaaaagcgggaaaggggtcagggcaca s panTro4.chr19 59818658 2229 + 63644993 aagctttgcggcagtacagcctaggtaatttgctgagcttgatgggtgtcagggtcagtccaagtgaaagcgaagagaggctgggattaagggtacaaagcaatagtaaagaaagcatgtttgagatccagaacagaataatgggtggttgagggaggtattgaggataggagagtatatgggtttggcaccacggggtggataggcaaaacaatttggttgataaggtgcagatcctgaactaatgtgtaagccttgtctggttttaggacaggtaaaatgggggaattgcaaggagagtttataggctttaaaaggccatgctgtagcgggctttaatccttttaaagcgtgctgtgggatgggatattggcattgagcggggtaagggtgattaggttttaatgagatggtaaggggtgcatgatcggtcaccaaggagggagtagaggtatcttatacttgtgggttaaggtggggggatacaagaggaggacgcaaaggaggctttggattgggaagaagggcggcaatgagatacagctgtggtccaggaatagtcagggaagcagataatttagttaaagtgtctcagcctaataagggaactgggcaggtggggataactaaaaaggagtgcttgaaagagtattgtctaagttggcaccagagttggggagttttaagaggtttagaagcctagctgtcaatacctacaacagttatggaggcaagggaaacgggcccttgaaaagaaggtaatgtggagtgggtagcctccatattgattaagaaggggacaggcttaccttccactgtgagagttacctagactgtctgtgatggtcctgtaggcttccgaggtgatcggg------cagtgtcagtcttcagctgctaagccgagaagatctgggaaggagtcagagagccttgggccagagttctagctgctctgggagtggctgccaggtgagttgaacagtccgattttcagtggggtcccgcacagatgggacgcggcttaggaggaatcccaggctgtggacattccttggcccagtggccagatttccagtacttgtagcaagctcctgggggaagaggttctggaggaaaccctggcagctgcggttcaggcgtttggagttctcgtgtgctggagatgtggctggggtttgtctcatctggagactggagtggaggcaaggaattgcaactcagaaatatgttgctacttggctgcctctactctattattgtacaccttgaaggcaaggttaattgagtcctgttgtggggtttgagggaccgaatttaatttttggagctttatttaatgtcgggagcagatttggtaataaaatgtattttgagaataagatggccttttgacttagggtctagggctgtaaagcatctcagggttgctgccaaacaagccatgaactgggctgtgtttttaaatttgatgaaaaagagcctaaacactatctgatttgggagaggtcagataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttttaagaggaaattgctgggcagttgggggagggctagtcacggaacggaactgtaagctggaccgggtatgaggaggggaggtgataaaaagattacagggtggaggagcggaggctgaggaagaattgggacccagcttggcctggcaaggaggggagatgtcagatgggtctgtagaaaaggaagattagaaagactcagcgatgcttggggttgggactgacgggacaggcgggagggaaagaaggaagatttgggatgagttgcactgggcacagagactagggagggaccgatgtgtaaaagaatgcctggatgtcaggtacctcagaccgtttgcccattttacaacaagaattatttatatcttgtaggatggaaaaattgaaagtgccgttttctggctatttggaaccactgtcgagtttgtattggggtcaagcagcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaggtttttaagaacacaggccaagggagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggttcaggggttcttaccctccagaaaagcgggaaaggggtcagggcaca i panTro4.chr19 I 71072 C 0 a score=274116.000000 s hg38.chr19_GL949753v2_alt 611646 1104 + 796479 gaagtaagggattggggtgcagagacaagaggtcggggtgtggaaataagggatcggggtgcagagataagacgtcagggcacagaaataagggatcgggggattcttgccccctagaaaagcggtacttgccactaagggtgaaggagaaggggttggggggttcttgcccccccagaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccatgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccctgcgtgattaaacaccaagggaaggctgccttcccgagtccatgaccggcgctggagttttgggtccacgaataaagcgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagagattgaagagtg-----------gaaaggagaaagtggttgagggatagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggacgagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcctaaggaagatcccctgattcgagttatggcaccaaaTTtcactcacgtccgtgtgaagagaccaccaaacaggatttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccagaaagagagtcagcaaagggagataggagtgcggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggg-ttgttctctggcgggcaggagtggggttcacaaggtgctcagtaggggagcttttgagccgggatgagccaggagaaggaatttcataagataatgtcatcacttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatacaggccacagggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59820887 1090 + 63644993 gaagtaagggattggggtgcagagataagaggtcggggtgtggaaataagggatcggggtgcagagataagaggtcggggcacagaaataagggatcagggggttcttgccccctagaaaagcagtacttgccactaaggatgaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacac--agagaaggagttgggggttcttgcccccccagaaaagcagtacttgccactaagggtgaaggaccaaggcaggcatccccgtgtggtcagacacctctgaaacgtgggtgaataatcagagaggtgtccccgcatgattaaacaccaagggaagactgccttcccaagtccatgacctgcgctggagttttgggtccacgaataaaacgcatctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggagaaactgaagggtg-----------gaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaaaaagaggctgcttactggatttaaaattggtgagatgttccttgggctggttggtctgaggaccagaggtcgtaggtggatctttctcatggagcaaagagcaggaggacaggggattgatctcct--------------gattcgagtcatggcaccaaaTTtcactcacgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggtgcaggcgggctgagtccaaaaagagagtcagcaaagggagataggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaaggggggttgttctctggcgggcaggagtgggggtcacaaggtgctcagtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagataatgtcatcagttaaggcaagaacaggccattttcatttctttcgtggtggaatgtcatcagttaaggcaggaaccagccatctggatgtgtacgtgcaggccacagggggatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56734783 1110 + 60714840 gaaataagggatt-gggtgcagagataagaggtcagggtgtggaaataagggatcggggtgcagagataagaggttggggcacagaaataagggattgggaggttcttgccccctagaaaaatggtacttgccactaagggcaaaggagaaggggttggggggttcttgcccccc-agaaaagcagagaaggggtagagacatggagagaaggagttgggggtttcttgccccccagaaaagcagtacttgccgctaagggtgaaggaccaaggcaggcgtccccgcgtggtcagacacctctgaaacgtgggtgagtaatcaggcaggcgtccctgtgtgattaaacaccaagggaagactgtcttcccgagtccgtgaccggcaccggagttttgggtccatggataaaacgcgtctcctgtctctaccagaaaaggaaaggaactgaaattaagagaagggaaagattgaagggtggcgccaagattgaaaggacaaagtggttgagggatagtgagagaggttggagaagacagtaagaagaggctacttacccaatttaaacttggtgagatgtttcttgggctggtgggtctgaggacccaaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatcttccaagggaggtcccccgatctgagtcacggcaccaaaTTtcatgcgcgtccatgtgaagagaccaccaaaaaggctttgtgtgagcaacatggc-gtttatttcacctgggggcaggcaggttgagtccaaaaagagagtcagcaaagggagatgggggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaagggggg-ttgttctctggcgggcaggagtgggggtcacaaggtacccagtgggggagcttttgagccaggatgagcc---agaaggaatttcacaagacaatgtcatcagttaaggcaagaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaactggccatctggatgtgtacatgcaggccaca-ggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 N 0 C 0 a score=5623.000000 s hg38.chr19_GL949753v2_alt 612750 10 + 796479 gtctggatca s panTro4.chr19 59821977 10 + 63644993 gtctggatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735893 10 + 60714840 gtctggatct i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55684152 10 + 59248254 gtctctatct i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47798111 10 + 51301725 gtctctatct i papAnu2.chr19 N 0 C 0 a score=112739.000000 s hg38.chr19_GL949753v2_alt 612760 64 + 796479 cctgacctggtgatccgcacacctcggcctcccaaagtgctgggattacaggcatgacccactg s panTro4.chr19 59821987 64 + 63644993 cctgacctggtgatccacgcacctcggcctcccaaagtgctgggattacaggcatgacccactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735903 64 + 60714840 cctgacctggtgatccgcccacctcggcctcccaaagtgctgggattacaggcatgacccactg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60557636 64 + 64156825 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i rheMac3.chr19 N 0 C 0 s macFas5.chr19 55684162 64 + 59248254 cctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccacca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798121 64 + 51301725 cctgacctcgtgatccgccaacctcagcctcccaaagtgctgggattacaggcgtgagccacca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47514990 64 + 50890351 cctgacctcgtgatccgcccacctcagcctcccaaagtgcagggattacaggcgtgagccaccg i chlSab2.chr6 N 0 C 0 a score=1388364.000000 s hg38.chr19_GL949753v2_alt 612824 698 + 796479 cacctggccTTAGAAAACTTCTTAAATATTAAAATGTATGTTATGTGTATTTTGCCACAATTTTTGAAAAGTACCTTCTGGTGTTtagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaattatatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagaagggcggatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---ttgaaaaaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggagaatggcataaactcgggaggcagagcttgcagtgagtcgagattgcgccactcaggaggctgaggcaagagaatggcataaaccccggaggcagagcttgcagcgagccgagattgcgccactgcactccagcatgggtgacagagcaagagtccatctc------aa s panTro4.chr19 59822051 627 + 63644993 cacctggccTTAGAAAACTTTTTAAATATTAAAATGTATGTTATGTGTATTTTGCTACAATTTTTGAAAAGCACCTTCTGGTGTTtagagacagaagatgagtggttgcctagggccgggagagtgaggggatcgtggtgatgggcagctggtcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactccgtgaataccacaaaatttaaaccattgaattatgcacttttaatgggtaattgtatggcatgtaaatcatatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatggagaccatcctggctgacatggtgaaaccctgtctctact---ttggaaaaaaa----aaaaaaaaaaaaaagattacccagacatggtggtgggcacctgtagtcctagctactcaggaggctgaggcaggaaaatggcataaacccgggaggcagagctt-----------------------------------------------------------------------gcagtaagctgagattgcgccactgcactccagcatgggtgacagagcgagactctgtctc------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56735967 620 + 60714840 tacctggccTTAGAAAACtttttaaatattaaaatttatGTTATGTATATTTTGCCACAGTTTTTGAAAAGTGCCTTGTGGTCTTtagagacagaagatgagtggttgcctaggaccgggagagtgaggggatcatggtgacgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagattgtgttgatggttgcaccaactctgtgaataccacaaaatttaagccattgaattgtgcacttttaatgggtaattgtatggcatgtaaattatatctcaacaaagttatATTTTTAAATACCAAAAAAAggccgagtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcatgaggtcaggagatggagaccatcctggctaacatggtgaaaccccatctctact---tt-------aa----aaaaaaaaaaaaaagattacccggacgtggtggcaggtgcctatagtcctagctactccagaggctgaggcaggagaatggcatgaacccgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagattgcgccactgcactcctgcatgggtgacagagcaagactccttctc------aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103273451 622 - 106955855 CACCTGGCCTTA-AAAACTTTTTAAATATTAAAATTTATGTTATGTATATTTTGCCACAATTTTTGAAAAGTACCTTGTGGTCTTtagagacagaagatgagtggttgcctggggctgggagagtaaggggatcgtggtgatgggcagctgatcggcatggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctgtgaataccacaaaatttaagccattgaattatgcacttttaatgggtaattgtatggcatgtaaattagatctcaataaagttatATTTTTAAATACCAAAAAAAggccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgagacaggcagatcacgaggtcaggagatggagaccatcctggctaacatggtgaaaccccgtctctatc---tt----aaaaa----aaaaaaaaaaaaaagattacccggacgtggtggtgtgcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaatctggga-----------------------------------------------------------------------ggcagagcttgcagtgagctgagattgcgccactgcactccagcatgggtgacagagcaagactgcttctc------ag i nomLeu3.chr10 N 0 C 0 s rheMac3.chr19 60557700 630 + 64156825 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctact---aaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccgctgcactccagcctgggtgacagagcgagactcattctc-------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55684226 636 + 59248254 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggctgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgacggttgcaccaactctttgaataccaccaaatctaagccattaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaatcaagttgtatttttaaaTACCAAAAAAAggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatctctactaaaaaaaaaaaaaattaccaaaaacaaaaaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgcacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc----aaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798185 630 + 51301725 cacctgaacttagaaaactttataaatattaaaattgatattatgtatattttgccacaatttttgAGAAGTACCTTGTGGTCTTTAGAGAgagtagatgagtggttgcctAGGGCCAGGAAAGTGAGGGGATCATGGTGATGGGCAGCTGATGGGCCTGGGGTTCTGAAGGGCAGTGATGACAACATTCTAAAATTAGACTGTGTTGACGGTTGCACCAACTCTTTGAATACCACCAAATCTAAGCCAttaaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttgtatttttaaataccaaaaaaagtccaggtgcagtggctcacacctgtaatcccagcactttgggaggccgagacaggcggatcacaaggtcaggagatcaagaccatcctggctaacatgatgaaaccccatccctact---aaaaaaaaaaatta-caaaaaaaaagaaaaattacctgggtgtagtggcgggtgcctgtagtcccagctattcgggaggctgaggcaggagaatggcgtgaacctgggaggcagagctt-----------------------------------------------------------------------gcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactcattctc------aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515054 635 + 50890351 cacctgAACTTAGAAAACTTTATAAATATTAAAATTGATGTTATGTATATTTTGCCACAATTTTTGAGAAGTACCTTGTGGTCTTTAGagagagtagatgagtggttgcctagggccgggaaagtgaggggatcatggtgatgggcagctgatgggcctggggttctgaagggcagtgatgacaacattctaaaattagactgtgttgatggttgcaccaactctttgaataccaccaaatctaagtcattcaattatgcatttttaatgggtaattttatggcatgtaaattatatctcaataaagttatATTTTTAAATACCAAAAAAAggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccaagacgggcggatcacgaggtcaggagatcaagaccatcctggctaacatggtgaaattccatctctact----aaagaaaaaatta-caaaaaaaaaaaaaaattacctgagtgtggtggtggattcctgtggtcccagctactcaggaggctgaggcaggagaatggtgtgaacctgggaggcggagctt-----------------------------------------------------------------------gcagcgagccgagatcacgccactgcactccggcctgggtgacagagcgagactcgttctcaaaaaaaa i chlSab2.chr6 C 0 C 0 a score=354495.000000 s hg38.chr19_GL949753v2_alt 613522 143 + 796479 -aaaaaaaaaaaaaa-------------------aGATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGGGGACAGTCCCAGGAATGCTGGTGTGGGCTTAAG s panTro4.chr19 59822678 140 + 63644993 -aaaaaaaaaaaaaa--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTACGTGATTGAATCACGACTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCTGGTGTGGGCTTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736587 160 + 60714840 -aaaaaaaaaaaaaaaaaaaaaaaaaaCCAAAAAAGATGAGTAATATCCTCTGTGTCACTTACCACTTAAGTGATTGAATCACGACTCAAAATTCATCATCTGAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274073 131 - 106955855 -aaaaaaaG--------------------------GATTAGTAATATCCTCTGTGTCACTTACCA---AAGTGGTTGAATCATGACTTGAAATTCATCATATCAAACATGGCTTAGAGTCTGTAGAG--GGG--ACAGTCCCAGGAATGCCGGTGTGGGCTTAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558330 142 + 64156825 -aaaaaaaaaaaaaT--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55684862 142 + 59248254 -aaaaaaaaaaaaaT--------------------GATTAGTAATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACGTGGCTTACAGCCTGTAGATAGGGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798815 141 + 51301725 -aaaaaaaaaaaaat--------------------gattagtaATATCCTCTGTGTCACTTACCACTTAAGTGGTTGAGTCATGGCTTGAaattcatcatctcaaacatggCTTACAGCCTGTAGATA-GGG--ACAGTCCCAGGAATGCAGGTGTGGGCTTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515689 141 + 50890351 -aaaaaaaaaaaaaa--------------------GATTAGTAATATCCTCTGTGTCACTTACCGCTTAAGTGGTTGAGTCATGGCTTGAAATTCATCATCTCAAACATGGCTTAGAGTCTGTAGATA-GGG--ACAGTACCAGGAATGTAGGTGTGGGCTTAAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19972022 142 - 122678785 AAAAAATGAATAAAT--------------------TGTTAGTGACATACTGGGTGTTGCTCACCCTTTAAGTGATTGAGTGATGGTTTGAAATCCATCATCTCCAACATGGCTTACAGTCTCTAAACA-GAG--ATTGTCCCAGGAGTATGAGTGTGAGCCTAAG i canFam3.chr1 N 0 I 15649 a score=557576.000000 s hg38.chr19_GL949753v2_alt 613665 253 + 796479 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaataccttgggaggccgaggcaggtggGAGGCTGAGGCAGGCGGATCactggagctcctggagcgaagaaaggatgctagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAGGAggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggcaggtggatcagttgagttcaggagttc s panTro4.chr19 59822818 253 + 63644993 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaataccttgggaggccgaggcaggtggaAGGTTGAGGCGGGCGGATCAGTGGAGCtcctggagcgaagaaaggatgccagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctctaatcccagcactttgggaggctgaggagggtggatcagttgagttcaagagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736747 236 + 60714840 GCTGAACTAAGTAGATCCAgatggctcatacctgtaatcccaataccttgggaggccgaggcaggt-----------------gaatcacttgagctcctggagtgaagaaaggatgctagtggaaaaactggtgaaatcagaataaggtctatagtttTATTTTTTAAAAGAggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcagttgaggtcaggagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274204 236 - 106955855 GCTGAATTAAATAGATCCAgatagctcacacctgtaatcccaataccttgggaggccgaggcaggt-----------------ggatcacttgagctcctggagtGAagaaaggatgctagtggaagaactggtgaaatcagaataaagtctacagtttTATTTTTTAAAAGAggctgggtgtggtggcttatgcctgtaatctcagcaatttgggaggctgaggcgggcggatcagttgaggtcaggagttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558472 236 + 64156825 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctggagCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i rheMac3.chr19 C 0 I 228 s macFas5.chr19 55685004 236 + 59248254 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaactggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggcacagtgactcatgcctgcaatcccagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47798956 236 + 51301725 GCTGAATTAAATAGATccagatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcctgGAGCGAAGAAAGGAAGttagtggaaaaactggtgaaatcagAATAAagtctatagttttattttttaaaagaggccaggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggtgggcggataaactgaggtcaggagttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47515830 236 + 50890351 GCTGAATTAAATAGATCCAgatggctcacacctgtaatcccaatacctagggaggccgaggcaggt-----------------ggatcacttgagctcCTGGAGCGAagaaaggatgttagtggaaaaaccggtgaaatcagaataaagtctatagtttTATTTTTTAAAAGAggccaggtacagtgactcatgcctgtaatctcagcactttgggaggccgaggtgggtggataaactgaggtcaggagttc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I a score=364844.000000 s hg38.chr19_GL949753v2_alt 613918 212 + 796479 gaaaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggct-acagagcaagattccatctccaaataagag- s panTro4.chr19 59823071 212 + 63644993 aaaaccagcctggccaacttgacgaaaccccatctctactagaaatacaaaaactagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaataaGag- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56736983 212 + 60714840 aaaaccagcctggccaacttgatgaaaccccatctctactagaaatacaaaaattagctgggcgtggttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacaccattgcactccagcctgggcg-acagagcaagactccatctccaaaaaaGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103274440 212 - 106955855 aaaaccagcctggccaacttgacaaaatcccatctctactagaaatacaaaaattagctgggcgttgttgtgggtgcctctaatcccagctactcaggaagctgaggcaggagaatcgcttaaacccaggaggcggaggctgtagtgagctgagatcacaccattgcactccaacccgggcg-gcagagcaagactccatctccaaaaaaGag- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55685240 213 + 59248254 aaaaccagcctggccaacgtgacgaaatcccatctctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacaaaaaaaaa i macFas5.chr19 C 0 I 8 s papAnu2.chr19 47799192 213 + 51301725 aaaaccagcctggccaacgtgacgaAATCCCATTtctgctagaaatacaaaaattagctgggcgcggttgtgggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggcagaggttgcagtgagctgagattgcaccactgcactccagcctgggca-acagagcaagactccatctcacacacacaca i papAnu2.chr19 C 0 I 5 s chlSab2.chr6 47516066 212 + 50890351 aaaaccagcctggccaacatgatgaaaccccatctctattagaaatacaaaaatcagctgggcgcggttgtgggcgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaacgcaggaggc--aggttgcagtgagctgagattgcaccactgcactccagcctgggtgtgcagagcaagactccatctcacaaaaaaaaa i chlSab2.chr6 C 0 I 9 e canFam3.chr1 19972164 15649 - 122678785 I e rheMac3.chr19 60558708 228 + 64156825 I a score=557549.000000 s hg38.chr19_GL949753v2_alt 614130 239 + 796479 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacactttcttcgggg s panTro4.chr19 59823283 239 + 63644993 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtaaaatttgaatacagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatta-----ataacagaatgtccttggttttgggaaatataacctgaagtgattagaggttga-gggcatcatatgcaaattagacacactttcttggggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737195 241 + 60714840 agacatgacaat----taaattgtgtaatcttggattaaatcctaagccaaatatatgtcactggtaaaacaagtggtgaaatttgaattaagtggataggtcagacaatagtgtcacatcagtgctatttcttgatcttgaacatcaataacataacagaatgtccttggttttgggaaatataacctgaagtgattagaggtTTATTTTCATCATATGCAAATTAGACATACTTTTTTGGGGG i ponAbe2.chr19 C 0 I 74 s nomLeu3.chr10 103274652 239 - 106955855 agacatgacaattaaataaattgtgtaatcttggattaaatcctaaaccaaatatatgtcactggtaaaacaagtggtgaaatttgaataaagtggatagatcagacaatagtgtcatatcagtgctatttcttgaccttgaacatcaataacataacagaatgtccttggttttgggaagtataacctgaagtgattaaaggttta-gggcatcatatgcaaattagacatactttttt----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60558936 244 + 64156825 agacatgacagttaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagaagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i rheMac3.chr19 I 228 C 0 s macFas5.chr19 55685461 244 + 59248254 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacgtttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacatagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcatatgcaaattagacacacttttttcgggg i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47799410 244 + 51301725 agacatgacaattaaataaattgtgtAATCTTGAATTAAATCCTAAACCAAATACATGTCACTGGTAAAACAAGGGGTGACATTTGAATAAAGTGGATAGATCAGACAATAGTGCCATATCAGTGACATTTCTTGACCTTGAACATCAGTAACATAGCAGAATGTCCTTGGTTTTAGGAACTATAACGTGAAGTGATTAGAGGTTTA-GGGCATCATATGCAAATTAGACACACTTTtttggggg i papAnu2.chr19 I 5 C 0 s chlSab2.chr6 47516287 244 + 50890351 aaacatgacaattaaataaattgtgtaatcttgaattaaatcctaaaccaaatacatgtcactggtaaaacaagtggtgacatttgaataaagtggatagatcagacaatagtgccatatcagtgatatttcttgaccttgaacatcagtaacagagcagaatgtccttggttttaggaactataacctgaagtgattagaggttta-gggcatcacatgcaaatcagacacacttttttggggg i chlSab2.chr6 I 9 C 0 e canFam3.chr1 19972164 15649 - 122678785 I a score=292397.000000 s hg38.chr19_GL949753v2_alt 614369 177 + 796479 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttggggaaatctggatgaagaaattacagat---ttttttttttttt------------atagacagggtaacactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctccct s panTro4.chr19 59823522 189 + 63644993 agagagggagagggagagaggctgaatgatgaagcaaatgtggtaaaatgctaactttgggggaatctggatgaagaaattacagat---ttttttttttttttttttttttttaatagacagggtaacactctgtcacccaggctagagcgcagtggcacgatcatggctcactgcagcttctacctccct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103274891 173 - 106955855 -----gggggagggagagaggctgaatgatgaagcaaatctggcaacatgctaactttggggaaatctggatgaagaaattacagaa---tttttttttttttt-----------agagacagggtaatactctgtcacccaggctagagtgcagtggcacgatcatggctcactgcagcttctacctcact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559180 176 + 64156825 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa-tttttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55685705 173 + 59248254 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaattacagaa----ttttttttttttt-----------aaagagagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799654 174 + 51301725 ----agagagaggaagaaaggctgAATGATGCAGCAAATGGAGTAAAATGCTAACTTTGGGGAAATCTGGATGAAgaaattacagaa---tttttttttttttt-----------aaagacagggtctcactctgtcacctaggctagagtgcagtggcacgatcatggctgactgcagcttctacctccct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516531 177 + 50890351 ----agagagagggagaaaggctgaatgatgcagcaaatggagtaaaatgctaactttggggaaatctggatgaagaaatcacagaattttttttttttttttt-----------acagacagggtctcactctgtcacccaggctagagtgcagtggcacgatcatggctgactgcagcttctacttccct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56737436 74 + 60714840 I a score=728062.000000 s hg38.chr19_GL949753v2_alt 614546 310 + 796479 gggctcagatgaccctctcacctcagcctcccaagtagctgggactataggcgcacagcaccacacctggctaa-tttttgcatttttttttc-ccccaggctcgtctcaagcaatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggccagaaattctttaaactatttttgc------------aagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGACAATATTCTTATATTTCTTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA s panTro4.chr19 59823711 321 + 63644993 gggctcagatgaccctctcacctcagtctcccaagtagctgggactataggcacacagcaccacacctggctaa-tttttgcatttctttttc-ccc-aggctcatctcaagcaatccacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcacctggccagaaattatttatactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGACAATATTCTTATATCTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGTGGCTGAGGTCTGAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737510 321 + 60714840 gggctcagatgaccctctcacctcagcctcccaagtaggtgggactacaggcacatagcaccacacctggctaa-tttttgcatgtttttttc-ccc-aggctggtctcaagcaatctacccacctcggcctcccaaagtgctaggattacaggtgtgagccactgcgtctggccAgaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaagctcaaaaTAATAA--AAGACAATATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTGAGGTGTGAGGA i ponAbe2.chr19 I 74 C 0 s nomLeu3.chr10 103275064 316 - 106955855 gggctcagatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctagctaa-tttttgtatatttttctt-ccccaggctggtctcaagcaatccacccaccttggcctcccaaagtgctaggattacaagtgtgagccactgcgcctggccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcaaaattaaaaGCTCAAAATAATAA--AAGATAA------TATATTTATTTGGTGAAGGTAATTATGTTACGGCTGAGAGGGGGGCTGAGGTGTGAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60559356 324 + 64156825 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCaaaataataataaaaaaaatattCTTCTATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55685878 325 + 59248254 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacacagcaccacacctgactaattttttgcattttttttttcccc-agactggtcccaagcaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttaaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATTAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGGTGTGAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47799828 324 + 51301725 AGGCTCTGatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggTCCCAAGCaattcatccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccaGAAATTCTTTAAACtatttttgccagtttttttGTAAGTCTGGAATTATGTCACAATTAAaagctcaaaataataataaaaaaagtattcttatatttatttggtGAAGGTAACTATGTTATGGCTGAGAGGGGGGCTCAGCTGTGAGga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47516708 324 + 50890351 gggctccgatgaccctctcacctcagcctcccaagtagctgggactacaggcacgcagcaccacacctgactaattttttgcatttttttttt-ccc-agactggtcccaagcaattcacccacctcagcctcccaaagtgctaggactacaggtgtgagccactgtgcctcgccagaaattctttgaactatttttgccagtttttttgtaagtctggaattatgtcacaattaaaaGCTCAAAATAATAATAAAAAAAGTATTCTTATATTTATTTGGTGAAGGTAACTATGTTATGGCCAAGAGGGGGGCCCAGGTGTGAGGA i chlSab2.chr6 C 0 I 2 e canFam3.chr1 19972164 15649 - 122678785 I a score=1288.000000 s hg38.chr19_GL949753v2_alt 614856 2 + 796479 TC s panTro4.chr19 59824032 2 + 63644993 TC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737831 2 + 60714840 CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275380 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55686203 2 + 59248254 CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47800152 2 + 51301725 cc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e chlSab2.chr6 47517032 2 + 50890351 I e rheMac3.chr19 60559680 2 + 64156825 I a score=76787.000000 s hg38.chr19_GL949753v2_alt 614858 154 + 796479 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGCTCCGTAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGCTGTGTAAGGGGAAACGCCAGCACCGAGTACTGAATCTTCAGTAAATAAGAAGGAGGCGggctgggtgtgg s panTro4.chr19 59824034 154 + 63644993 CAGCCTACATAAGTCTCCTCCATAG-AGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCCAGAGTTATGACAGTTGTGTAAGGGGAAACACCAGCACCGAGTGCTGAATCTTCAGTAAATAAGAAGCAGGTGggctgggtgtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737833 155 + 60714840 GAGTCTACATAAGTCCCCTCCATAGAAGGGCATCCAAACGCTCCATAGGGAGAAggataaagaaaacacccagagttatgacagttgtgtaaggggaaacgccagcaccgagtgctgaatcttcagtaaataagaaggagGTGggctgggtgcgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103275382 153 - 106955855 CAGCCTACATAAGTCTCTTCCATAGAAGGGCATCCAAGCGTTCCATAGGGGGAAGGATAAAGAAAACACCC--AGTTATGACAGTTGTGTAAGGGGAAACGCCAGCACCCAGTGTTGAATCTTCAGTAAATAAGAAGGAGGTCggctgggtgcgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e chlSab2.chr6 47517032 2 + 50890351 I e papAnu2.chr19 47800154 0 + 51301725 C e macFas5.chr19 55686205 0 + 59248254 C e rheMac3.chr19 60559680 2 + 64156825 I a score=884478.000000 s hg38.chr19_GL949753v2_alt 615012 391 + 796479 tggctcacgcctgtaatcccagcactttgggaggctaaagtgggctgatcacttgaggtcaagagttcgagactagcctggccaacatggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctacttgggaggctagaacaggagaattgcttgaacccaggaggtgaaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagaaaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTAcagtagtcacatgtatccaccaggatatattccaaggccccagtggatgctgaaaacta s panTro4.chr19 59824188 391 + 63644993 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaagagttcgagactagcctggccaacgtggggaaaccctgtctctactaaaaatacaaaaattagtcgagtgtggtggcacac----------------------------------gcctgtaatcccagctactcggaaggctagaacaggagaactgcttgaacccaggaggtggaggttgcagtgagctgagattacaccactgcaccccagcttgagggacagagtgagattccgtcttaaagagagaaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTAcagtagtcacatgtatccaccaggatatatttcaaggccccagtggatgctgaaaactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56737988 423 + 60714840 tggctcaagcctgtaatcccagcactttgggaggctaaggtgggctgatcacttgaggtcaggagtttgagactagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattggtcgagtgtggtggcacacgcctgtaatcccagctactcaggaggttgcacatgcctgtaatcccagctactcgggaggctagaacaggagaattgcttgaacccaggaggtggaggttgcagtgagctgagattgcaccactgcaccccagcttgagggacagagcgagattccatcttaaagag--aaaaaaaagaaTTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTGTACAGTAGTCACATGTATCCATCAggatatattccaaggccccagtggatgctgaaaacta i ponAbe2.chr19 C 0 I 76 s nomLeu3.chr10 103275535 369 - 106955855 tggctcaagcctgtaatcccagcactttgggaggctaagatgggccaatcacttgaggtgaggagttcgagactagcctggccaacatggtgaaaccctgtctctactaaaaa-acaaaaattagtcaagtgtggtggcactc------------------------------------------------------gggaggctagaacaggagaattgcttgaacccaagaggtggaggttgcagtgagctgagattgcaccactgtaccccagcttgagggacagagcgagattccatcttaaagaggaaaaaaaaGGAATTAGCACATTTGTTTGCCTCAAGAAGATACAACTAGTCTTG-ACAGTAGTCATATGtatccaccaggatacattccaaggccccagtagatgctgaaaacta i nomLeu3.chr10 C 0 I 2 s rheMac3.chr19 60559682 390 + 64156825 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccatctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagtgagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCATGTAcagtagttacctgtatccaccaggatacattccaaggccccagtgaatgctgaaaacta i rheMac3.chr19 I 2 I 1699 s macFas5.chr19 55686205 390 + 59248254 tggctcatgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtggaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag-aaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47800154 389 + 51301725 tggctcacgcctgtaatcccagcactttgggaggccaaggtgggccgatcacttgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcatgc----------------------------------acctgtaatcccagctactcaggaggctacgaCAGGAGAAttccttaaacccaggaggtggaggttgcagtgagctgagatcacaccattgcaccccagtttgagggacagagcaagacgccatcttaaag--aaaaaaaaaagaattagcacaTTTGTTTGCCCCAAGAAGATACAACTAGTCTTGTACAGTAGTTACCTGTACCCACCAGGATACATTCTAAGGCCCCAGTGAATGCTGAAAACTT i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47517034 391 + 50890351 tggctcacgcctgtaatcccaacactttgggaggccaaggtgagccgatcacttgaggtcaggagttcaagacaagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagtcgggtgtggtggcgggt----------------------------------gcctgtaatcccagctactcaggaggctacgacaggagaattccttaaacccaggaggtagaggttgcagtgagccgagatcacaccattgcaccccagtttgagggacagagcgagacgccatcttaaagaaaaaaaaaaaagaaTTAGCACATTTGTTTGCCCCAAGAAGATAAAACTAGTCTTGTACAGTAGCTACCTGTATCCACCAGGATACATTCCAAGGCCCCAGTGAATGCTGAAAACTA i chlSab2.chr6 I 2 I 853 e canFam3.chr1 19972164 15649 - 122678785 I a score=2823.000000 s hg38.chr19_GL949753v2_alt 615403 13 + 796479 catagtaccttac s panTro4.chr19 59824579 13 + 63644993 catagtaccttac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275906 13 - 106955855 catactaccatac i nomLeu3.chr10 I 2 I 4 s macFas5.chr19 55686597 8 + 59248254 CATAGTGT----- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47800545 8 + 51301725 catagtgt----- i papAnu2.chr19 I 2 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=1798.000000 s hg38.chr19_GL949753v2_alt 615416 11 + 796479 atgt--------atatata s panTro4.chr19 59824592 19 + 63644993 atgtgtatatatatatata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686605 11 + 59248254 --------Gtacatatata i macFas5.chr19 C 0 I 242 s papAnu2.chr19 47800553 11 + 51301725 --------gtgtgtatata i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=45850.000000 s hg38.chr19_GL949753v2_alt 615427 450 + 796479 tatgt-atatacatatatacacatat--------------acgtatatgt----------------------atacatac---atgtatatatgcatgtatgtat----atacatatatgcatatatacatacatgtatatatacatg-tatgtatatacatata----tgtatatgtatgtatacacgcatacatgtat------------gtat------acacg----------catatat----gta-tgtatatac------------atatatgtatgtatacacgcata-catgtatg--tatatacatatatgtatgtatacacgcata-catg-tgtgtataca---tatatatgcatgt-atgcat---gtgtgtata----tatacatatatgt----gtatatatacgcatatacat---gtatgtgtatatatgcat----gtgtatatatacatgtacggtactatgcagtatatata-------------cacatatatgtatatatgtatacatatatgtataaatgtatatatgt------------------------gtatatatataaaaggtatatatgtatatatg s panTro4.chr19 59824611 577 + 63644993 tatgt-atatacatatatacatatatgtatatgtgtatatacgtatatgtgtatatatgtatacatgcatgcatacatgc---atgtatatatacatgtgtgtgtgcgcatacatgtatgtatatatgcatgtatgtatatatgcata-catgtatgtgtatata----catatatgtatgtatgcgcgcatacatgtatatgtacatatatgtatgcatgCACACGTGTGTGTGTACATATAT----GTA-TTTATACACGCATGCgtatatatacatgtatgtatacacgcata-catgtgtgcatatatacatgtatgtatatatgcacgcatg-catg-tatatatacg---tatgtatatatgc-acgcat---gcatgtata----tgtatatatacgtacatgtatatgcgcacatatacat---gtatgtgtatatatacatatatgtgtatatatacatgtacggtactatgcagtatatatatgcggtatatatacgcatatatgtatatatgtatacatatatgtataaatgtatatatgtataaatgtataaatgtatatatgtgtatatatataaaaggtatatatgtatatatg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55686858 451 + 59248254 tatataatatatattt-tttatatgt--------------a---atatttttatatatattttta-------atatgtaatatatatataaatat---tatatat-----taaaaatatata-atatttataatattatatataaatattacatataaaaatatataatattatatataaatat-------tacatata-----------------------aaaaa----------tatataatattata-tataaatat-------------------tacatataaaaatatataatat-tatatataaatat-----tacatataaaaatatataatattatatataaatattatatataaatattatatataaaaaatatataatattatatataaatat-----tatatataaaaatatatattatctataaatatataaatat-------tatctataaatatata---------aatatataaa-----taaatatataaatatatataaatatataaatat-tatatataaatatataaatat---------------------------tatatataaaa-atatatataaaac--ta i macFas5.chr19 I 242 C 0 s papAnu2.chr19 47800564 365 + 51301725 tatat-atataaatat-tatatatat--------------a---atatt-----------------------atatataa---atatataaatat---tatatat----ataatattatatataaatatataatattatatataaatattatatataaatatata----aatatatataaacat--------------------------------------ataaa----------tatataa----atattataaacat-------------------tatgtataaatatata-aatat-----tataaacat-----tatatat---attata-aacattatatataaa---tatatataaacactatatat---aaatatata--aatatatataaacat-----tatatataaatatataaat---------atatataaacat-------tatatataaatatata---------aacat------------------------------tatatataaatat-tatatataaatatataa--------------------------------atatataaaatatatatataaaactata i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e nomLeu3.chr10 103275919 4 - 106955855 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=22098.000000 s hg38.chr19_GL949753v2_alt 615877 31 + 796479 tgtgtatatataAAATGCATGAATTTCTTTT s panTro4.chr19 59825188 31 + 63644993 tgtgtatatataAAATGCATGAATTTCTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103275923 31 - 106955855 tatatatatatATAATgcatgattttttttc i nomLeu3.chr10 I 4 I 30 s macFas5.chr19 55687309 31 + 59248254 tatatatataAaaaacgcatggatttctttt i macFas5.chr19 C 0 I 33 s papAnu2.chr19 47800929 31 + 51301725 tatatatatataaaacgcatggatttctttt i papAnu2.chr19 C 0 I 33 e canFam3.chr1 19972164 15649 - 122678785 I e ponAbe2.chr19 56738411 76 + 60714840 I e chlSab2.chr6 47517425 853 + 50890351 I e rheMac3.chr19 60560072 1699 + 64156825 I a score=606260.000000 s hg38.chr19_GL949753v2_alt 615908 366 + 796479 ttcttactgtagatcttaacaacttctgcatagaatttttttttattaagtggagagttagttacttacttaaaagaaATGTTTCTTggctgggtgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggaagattcacttgaggtgaggagttggagaccatcctggccaacgtggtaaaaaccggtctctactaaaagtacaaaaatgagctgggcgtggtgttgggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg s panTro4.chr19 59825219 363 + 63644993 ttcttactgtagatcttaac---ttctgcatagaatttttttttattaagtggagagttagtaacttacttaaaagaaATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggaagattcacttgaggtaaggagttagagaccatcctggccaacatggtaaaagctggtctctactaaaagtacaaaaatgagctgggcgtggtgttaggtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccacaaggcagaggttgcagtgagctgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738487 361 + 60714840 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtgaagaGTTAG----TTACTTAAAAGAAATGTTTCTTggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggtggaaagattcacttgaggtgaggagttcgagaccagcctgggcaacgtggtaaaacccagtctctactaaaagtacaaaaatgagctgggcgtggcgttgagtgtctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacctacgaggcagaggttgcagtgagctgagatcacaccactgcaccgcagcctgggcaacagagcaagactctg i ponAbe2.chr19 I 76 C 0 s nomLeu3.chr10 103275984 359 - 106955855 ttcttaccgtagatcttaacaacttctgcatagaa-ttttttttattaagtggagaGTTAG----TTACTT--AAGAAATGTTTCTTggctgggcgtggtggctcacacctgtaatcccagcactttgggagggtcaggcaggaagagtcacttgaggtgaggagttcaagaccagcctggccaacgtggtaaaacccggtctctactaaaagtacgaaaatgagctgggcatggtgttgggtgtctgtagtgccagctactcaggtggctgaggcaggagaattgcttgaacccacgaggcagaggttgcagtgagccgagatcacaccactgcaccacagcctgggcaacagagcaagactctg i nomLeu3.chr10 I 30 C 0 s rheMac3.chr19 60561771 362 + 64156825 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattgacttgaggtcaggaaatccagaccagcctggccaacgtggtgaaagcccgtctctact-aaagtacaaaaatgagccaggcgtggtgttgggcatctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgtggggaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i rheMac3.chr19 I 1699 C 0 s macFas5.chr19 55687373 363 + 59248254 ttcttactgtagatcttaacaacttctgcatagaa-ttttttttattaagtg--gagttagttacttacttaaaagaTATGTTTCTTggccgggcgtggtggttcacacctgtaatcccagcactttgggaggccgagacgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaagcccgtctctactaaaagtacaaaaatgagccaggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggcggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i macFas5.chr19 I 33 C 0 s papAnu2.chr19 47800993 363 + 51301725 TTCTTACTGTAGATCTTAACAACTTCtgcatagaa-ttttttttattaagtg--GAGTTAGTTACTTACTTAAACGATATgtttcttggccgggcatggtggttcacacctgtaatcccagcactttgggaggccgaggcgggaagattcacttgaggtcaggaaatcaagaccagcctggccaacgtggtgaaaccctgtctctactaaaagtataaaaatgagccgggcgtggtgttgggtgtctgtagtcccagctactcgggaggctgaggcaagagaatcgcttgaacctgggagacggaggttgcagtgaacaaagatcgcaccactgcaccacagcctgggggacagagcaagactctg i papAnu2.chr19 I 33 C 0 e canFam3.chr1 19972164 15649 - 122678785 I e chlSab2.chr6 47517425 853 + 50890351 I a score=84314.000000 s hg38.chr19_GL949753v2_alt 616274 75 + 796479 tctcaaaaaaaaaaaaaaaagaaagaaaaagaaaAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG s panTro4.chr19 59825582 75 + 63644993 tctcaaaaaaaaaagaaaaaagaaaaaaaagaaaAAGAAAAGAAATGTTTCTTTTCTTATTAAGTTCTTTAAATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738848 53 + 60714840 tctcaaaaaaaaaaa----------------------aaaagaaaaGTTTCATTTCTTATTAAGTTCTTTAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276343 47 - 106955855 tctcaaaaa----------------------------aaaagaaaTGTTTCTTTTCGTATTAAGTTCTTTAAATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562133 64 + 64156825 tctcaaaacaaaaaaaaaa-----------gaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687736 64 + 59248254 tctcaaaaaaaaaaaaaaa-----------gaaaaagaaaggaaaTGTTTCTTTTCTTATGAAGTTCTTTGAATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801356 63 + 51301725 tctcaaaaaaaaaaaaaaa------------aaaaagaaaggaaatgtttcttttcttatgaagttttttgaatg i papAnu2.chr19 C 0 C 0 s canFam3.chr1 19987813 51 - 122678785 tttcaaaaaaagaaaaaAA-----------AGAAGGCAAAAAGAATA-------------AAGATTACTTAAAAA i canFam3.chr1 I 15649 C 0 e chlSab2.chr6 47517425 853 + 50890351 I a score=404331.000000 s hg38.chr19_GL949753v2_alt 616349 154 + 796479 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGTTAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGTATACTGTACACAGAGAAGCCAACGTCAAAACCCCTattttta s panTro4.chr19 59825657 154 + 63644993 AAAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACGTCAAAACCCCTattttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56738901 154 + 60714840 AAAAGCTTTTCTTTTCACTTTTATTTTAGTGAAACATTATAACACT-------ATCTTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAATTAACTTATCCAAGCATATGCATGCTGTACACAGAGAAGCCAACATTAAAACCCCTattttta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276390 153 - 106955855 -AAAGCTTTTCTTTTCACTTTTATTTTATTGAAACATTATAACACC-------GTATTTGAAGAAGATAGTGTTATCATTCCATTCTGATGAAACCAGTTGACTTATCCAAGCATATGCATGCTGTACACAGAGGAGCCAACGTTAAAACCCCTattttta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562197 152 + 64156825 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55687800 152 + 59248254 AAAAGCTTTTCTTTTCACGTTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACGCAGAGGAGCCAGCGTTAAAACCCCTattttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47801419 152 + 51301725 aaaagcttttcttttcacgtttattttattgaaacattATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACAGAGGAGCCAGCGTTAAAACccctattttta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47518278 152 + 50890351 aaaaGCTTTTCTTTTCACATTTATTTTATTGAAACATTATAGCACT-------ATCTTTGAAGAAGAC--TGTTATCATTCCATTCTGATTAAACCAATTAACTTATCCAAGCATATGTATGCTGTACACGGAGGAGCCAGCGTTAAAACCCCTattttta i chlSab2.chr6 I 853 C 0 s canFam3.chr1 19987864 142 - 122678785 ----------------AATTGCATTTTGTTGAAACATTGTAAAGATTCTCCAAATCTTTGGAGAACATAGTGTT---ATTTCATTCTGATGAAACCAATTAACTGATCCAATCATATGTATACAAAACAAAGAGGAGCCAAGATTAAACACAAAGTTTTTA i canFam3.chr1 C 0 I 156 a score=1979586.000000 s hg38.chr19_GL949753v2_alt 616503 874 + 796479 tctttttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttgcattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttctttt--ttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcaccttccaggttcaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacacccggctaattttgaatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaactcccgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggctatatacccagcgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg s panTro4.chr19 59825811 878 + 63644993 tcttcttagattcagcagatacatgtgcaggttttt---tatgagtatattgcatgatgctgaggcttacattaatgatctagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttagcgctctcacttataagtgagaacatgtggtatttggttttcttttcttttctttttttttttttttgagatggagtttcactcttgttgcccaggctggagtacaatggcaccatctcggctcactgcaaccttcacctcccaggttgaagcaattctcctgcctcagcctcccgagtagttgggactacaggcatgtgccaccacgcccggctaattttgtatttttagtaaagacagggtttctgcatgttggtcaggttggtctcgaactcctgacctaaggtgatccacctgcctcagcctcccaaagtgctgggatgacaggcgtgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcgttctgtggtgtatacatatcacattgtctttatccagtccacctctgatgggacctgggtggattccatgtcttcactattgtgaatcctgctgcaatgaacatacaagtgcatgtgtctttttggtagaatgatttattttcctttggatatatacccagtgatgggattgctgggctgaatggtaactctgtttgtagttctctgaaatatctccaaaccaaactgctttccacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739055 869 + 60714840 tctttttagactcagcagatacatgtgcaggtttttttatatgagtatattgcatgatgctgaggcttgcattaatgatccagtc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatgtttaacgctctcacttataagtgagaacatgtggtatttggttttct----------ttttttttttttttgagacggagtttcactcttgttgcccaggctggagtacaatggcgccatctcggctcactgcaacctccacctcccaggttcaaacaattctcctgcctcagcctcccgagtagttgggactacaggcatgcgccaccacgcctggctaattttgtatttttagtagagacagggtttctgcatgttggtcaggctggtctcgaacacccgacctcaggtgatccacctgcctcagcctaccaaagtgttgggatgacaggcatgagccaccacatctggccagtatttggttttctgtttctgtgttaacttgcttaggataatggcctccagctgcatccatgttgctgcaaaggacataatcttgtgatttttcaaggctgtatagcattctgtgctgtatacataccacattgtctttatccagtccacctctgatgggacctgggtggattccatgtctttgctattgtgaatcctgctgcaatgaacacacaagtacatgtgtctttttggtagaatgatttattttcctttggatatacacccagtgatgggattgctgggctgaatggttactctgtttgtagttctctgaaacatctccaaaccaaactgctttccacagtggctgaactaatttacac--ccaccaacagtgtataagtgtcccctttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103276543 871 - 106955855 tctttttagattcagcagatacatgcgcaggttttt-tatatgagtatattgcatgatgctgaggcttgcattaatgatccagcc--------------------accaaataggtagattttcaagccttgctcccctccttacccaatggttagcgctctcacttataagtgagaacatgtggtatttggttttcttttttc----ttttttttttttttgagaccgagtttcactcttgttgcccaggctggagtataatggcgccatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagttgggactacaggcatgcaccaccacgcccgggtaattttgtatttttagtagagacagggtttcggcatgttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggatgacaggcatgagccaccgcgtctggccagtatttggttttctgtttctgtgttaactcgcttaggataatggcctctagctgcatccatgttgctgcaaaggacatgatcttgtgatttttcaaggctgtatagcattccatggtgtatacataccacactgtccttatccaatccacctctgatgggacctgggtggattccatgtctttgctatcgtggatcctgccgcaatgaacatacaagtgcgtgtgtctttttggtagaatgacttactttcctttggatatatacccagtaatgggattgctggactgaatggtaactctgtttgtagttctctgaaatatctccaaaca-----gctttctacagtggctgaactaatttacactcccaccaacagtgtataagtgtcccctttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60562349 874 + 64156825 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgtctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcctaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i rheMac3.chr19 C 0 I 2749 s macFas5.chr19 55687952 875 + 59248254 tctttttagattcagcagatacatgtgcagtttttt---aatgagtatattgcatgatgttgaggcttgcactaatgatccagtcacccaagtagtgagcatattaccaaataggtaaattttcaagccttgctcccctccttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg----------------tttttttttttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccatctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataacggcctccagctgcattcatgttgctgcaaaggacataaccttgtgatttttcaaggccctatagcattctgcggtgtatacataacgcattgtctttatccaatccacctctgatgggcactgagttgatgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgaatggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i macFas5.chr19 C 0 I 2795 s papAnu2.chr19 47801571 874 + 51301725 tctttttagattCAGCAGATACATGTGCAGTTTTTT---AATGAGTATATTGCAGGATGTTGAGGCTTGCACTAATGATccagtcacccaagtagtgagcatatTACCAAATAGGTAAATTTTCAAGCCTTGCTCCTCTCcttacccaatgttta--gctctcacttataagtgagaacatgtggtatgtgg-----------------ttttttatttctttagatggagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcaccgcaacctccacctcccagattcaagaaattctcctacctcagcctcctgagtagctgtgattacaggaatgtgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactagaatgacaggcgtgagccaccgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaacgGACATAACCTTGTGATTTTTCAAGGCCGTATAGCATTCTGCGGTGTATACATAACGCATtgtctttatccaatccacctcTGATGGGCACTGAGTTGATgccatgtctttcctattgtgaatcctgctgcaacaaacatacaagtgcatatgtctttttggtagaatgatttattttcctttggatatatacccagtaatgggatggctgggctgAATGGTAACTCTGTTTATAGTGCTCTGAAACATCTCctaact-----gctttccacagtggctgaactaatttacacgcCCACCAACAGTATATCAGTGTCCCctttg i papAnu2.chr19 C 0 I 2476 s chlSab2.chr6 47518430 870 + 50890351 tctttttagattcagcagatccatgtgcagtttttt---aatgagtatgttgcatgatgttgaggcttgcactagtgatccagccacccaagcagtgagcatattaccaaataggtaaattttcaagcctcgctcccctccttacccaacgttta--gctctcacttataagtgagaacatgtgg-atgtgg--------------------ttttcttttttagatagagtttcactcttgttgcccgggttggagtgcaatggcgccatctcggctcactgcaacctccacctcccagattcaagacattctcctacctcagcctcctgagtagctgtgattacaggaatgcgccaccacgcccagctaattttgtatttttagtagagacagggtttccacatgttagtcaggctggtctcaagctcccgacctcaggcaatccacctgcctcagcctcccaaagtactggaatgacaggcgtgagccactgtgtctggccagtatttggttttctgtttctgtgttaactcatttaggataatggcctccagctgcatccatgttgctgcaaaggacataaccttgtgatttttcaaggccgtatagctttctgtggtgtatacataacgcattgtctttatccaatccacctctgatgggcaccgagttgattccatgtctttcctattgtgactcctgctgtaacaagcatacaagtgcatatgtctttttggtagaatgatttattttcttttggatatatacccagtaatgggatggctgggctgaacggtaactctgtttatagtgctctgaaacatctcttaact-----gctttccacagtggctgaactaatttacacgcccaccaacagtgtatcagtgtcccctttg i chlSab2.chr6 C 0 I 2237 e canFam3.chr1 19988006 156 - 122678785 I a score=226994.000000 s hg38.chr19_GL949753v2_alt 617377 447 + 796479 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatggccattctgactggtgtgagatggtattgttgagggataatttaggaatcagagagaccgaggggttgaggaggatttattattattattattatttaggtgcaccggccccagtcagattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggttgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaaggcagttattcaattgagacatgcatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctagtgatcttgcagccgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga s panTro4.chr19 59826689 447 + 63644993 ctccacaatctcaccagcatctgttaatttctggcttttcagtaatagccattctgactggtgtgagatggtattgttgcgggataatttaggaatcagagagaccgaggggttgaggaggatttcttcttattattattatttaggtgcaccggccccagtcggattaacatccaaaaagactgaggctcgaacagagagtccggttaccttttaagcattttgtggggtggggggagatctgtgcagggggaagcatattacagaagcgagaaacaaagacagttattcaattgagacatgcatcacattattccttacttttcaa-gaaaaatatgttttacgacttgaggttatcctgtctggtgaccttgcagctgcacggcaagagaaacagggtcttcacaatgcctgggaaagggagagataaggctcactagccacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56739924 443 + 60714840 ctccacaatctcgccagcatctgttaatttctgacttttcactaatagccattctgactggtgtgagatggtatTtttgcaggataatttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaag-ctgaggcccaaacaaagagtccggttaccttttaagcattttgtggggccgggggagatctgtgcagggggaagcatattacagaagcaagaaacaaagacagttattcaattgagacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgaccttacagctgcacagcaagagaaacagggtgttcacaatgcctggaaaagggagagataaggctcactagccacaga i ponAbe2.chr19 C 0 M 475 s nomLeu3.chr10 103277414 444 - 106955855 ctccacaatctcgccagcatctgttaatttctgacttttcagtaatagccattctgactggtgtgagatggtattgttgcgggatagtttaggaatcagagagaccgaggggttgaggaggat---ttattattattattatttaggtgcaccgg-cccagtcagattaacatccaaaaagactgaggcccgaacaaagagtccagttaccttttaagcattttgtcgggcggagggagatctgtgcaagtggaagcatattacagaagcgagaaacaaagatagttattcagttgacacatgcattacattatttcttacttttcaaggaaaaacatgttttacgacttgaggttatcctgtctagtgatcttgcagctgcacagctagagaaacagggtcttcgcaatgcctgggaaagggagagataaggctcactagccacaga i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=24847.000000 s hg38.chr19_GL949753v2_alt 617824 98 + 796479 cagaaaaacaggcagttcatgtttaaaggactccacctctttctcttcctcggggggaactgggttttcttaaatacaactgagtttttgtttacaca s panTro4.chr19 59827136 98 + 63644993 cagaaaaacaggcagtgcatgtttaaaggactctacctctttctcttcctccgggggaactgggttttcttacatacaactgagtttttgtttacaca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277858 98 - 106955855 cagacaaacaggcagttcatttttaaaggactccacctctttctcttcctcagggggaattgggttttcttacatacaactgagtttttgttcacaca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M e chlSab2.chr6 47519300 2237 + 50890351 I e papAnu2.chr19 47802445 2476 + 51301725 I e macFas5.chr19 55688827 2795 + 59248254 I e rheMac3.chr19 60563223 2749 + 64156825 I a score=250576.000000 s hg38.chr19_GL949753v2_alt 617922 146 + 796479 ttctgtaatttcttttaattcctgttccagtatctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACCTCCACATTGCAGAATT s panTro4.chr19 59827234 146 + 63644993 ttctgtaatttcttttaattcctgttccagtttctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACAACTTCCCACAGTCAGCTCTGGGTACGACATCCACATTGCAGAATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103277956 146 - 106955855 ttctttaatttcttttaattcctgttccagtatctcactgtgAAACTCCCTATGTTTTTATACGATTCTCAGGGGGTTTCCTC-TGGGCATGATTGGGCACGACTTCCCACAGTCAGCTCCAGGCACGACCTCCACATTGCAGAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60565972 146 + 64156825 TTCTTTAATTTCTTTTCATTCCTGTTCCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i rheMac3.chr19 I 2749 C 0 s macFas5.chr19 55691622 146 + 59248254 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCGGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACCGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i macFas5.chr19 I 2795 C 0 s papAnu2.chr19 47804921 147 + 51301725 ttctttaatttcttttcattcctgttcCAGTATCTCACTGTGAAATTCCCTGTGTTTTTATACGATTCTCAGGGGGTTTCCTCTTTTGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i papAnu2.chr19 I 2476 C 0 s chlSab2.chr6 47521537 146 + 50890351 ttctttaatttcttttcattcctgttccaGTATCTCACTGTGAAATTCCCTGTGTTTTTATATGATTCTCAGGGGGTTTCCTC-TGAGCGTCATTAGGCCTGACTTCTCACGGTCAGCTCTGGGTACCACCTTCACATTGCAGAATT i chlSab2.chr6 I 2237 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M a score=2800.000000 s hg38.chr19_GL949753v2_alt 618068 1 + 796479 G s panTro4.chr19 59827380 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278102 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566118 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691768 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805068 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521683 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869958 1 + 49145316 G i calJac3.chr22 N 0 C 0 e canFam3.chr1 19988006 156 - 122678785 I e ponAbe2.chr19 56740367 475 + 60714840 M a score=246493.000000 s hg38.chr19_GL949753v2_alt 618069 93 + 796479 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGACCACGGCCTTTC s panTro4.chr19 59827381 93 + 63644993 AGAAGTTGACCCAGAAATGCATTTTGGGCTGAGCAGACAATTGTCAGAGTTGCTGGCTAGACCA----------CAGATGTGTCAGAGGGGCCGTGGCCTTTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103278103 93 - 106955855 AGAAGTTGACCCAGAAATGCATTTCGGGCTGAGCAGACAATTGTCAGAGGAGCTGGCTAGGCCA----------CAGCTGTGTCAGAGGGCCTGTGGCCTTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566119 93 + 64156825 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGGGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691769 93 + 59248254 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CGGATGTGTCAGAGGGACCATGGCCTTTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805069 93 + 51301725 AGAAGCTGACCCAGAAATGCATTTCAGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGATGTGTCAGAGGGACCATGGCCTTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521684 93 + 50890351 AGAAGCTGACCCACAAATGCATTTCGGGCTGAGCAGACAAGTGTCAGAGGAGCTGGCTAGACCG----------CAGACGTGTCAGAGGGACCATGGCCTTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45869959 93 + 49145316 AGAAGTTGACCCAGAAATGTATTTCAGGCTGAGCAGAAAGTGGTCAGGGGAGCTGGCTAGACCA----------CAGCTGTGTCATAGAGACCATGGCCTTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988162 103 - 122678785 AGAAGTGAACCCTGAGATGAGTCTCAGGTGAGGCAGACAATTGTCAGAGGATCTGGTTAGACCACAGAGATGATCAGATATGTCATAGGGACCATGATTTGTC i canFam3.chr1 I 156 C 0 e ponAbe2.chr19 56740367 475 + 60714840 M a score=2648712.000000 s hg38.chr19_GL949753v2_alt 618162 804 + 796479 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATCTATCTCC----CTGGCCCGCCCGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCACGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGTCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAACCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT s panTro4.chr19 59827474 800 + 63644993 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAGCAGTCAACGTGAAAGCGCTCTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGTATGT----CC----CTGGCCCGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTGGCGTGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACCCTTCCTGGTTCAGGCCAAGCTCCT-TCCACCCAAGCACGGCTGGGGAGA-GGGGACA-GGGTGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGGGGAGCCTAAGGTTGGGGGGAGGGGGCTCCGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCACTTTGAAGGAAGCCTTTTTGCCGTGGACAGACCAAAAGCCCCTGAGCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCATGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56740843 800 + 60714840 TGTAAGCTCATGGTCAGAGGGCGGA-GGGGTGTTGTGAGCGTTCTGATGAAAACAGTCAACATGAAAGCGC-CTGGTGATGGGCGCTGGTG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCTGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCGATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGAATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTACTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTGGGGTTCAGGCCAAGCTCCC-TCTACCCAAGCACAGCTGGGGAGA-GGGGGCA-GGATGCTGGCTTCCCAGGAGAGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGGTTGGGGGGAGAGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGCGACCATCTGTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAGGCCTTTTTGCCGTGGAGAGACCAAAACCCGCTGAACGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACTCCCGCACAGCAGGGCAATACAGCTGCATCTATAGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACGTGCTGGATGTGGTGGTAACAGG----TAACTGT i ponAbe2.chr19 M 475 C 0 s nomLeu3.chr10 103278196 805 - 106955855 TGTAAGCTCATGGTCAGA-GGCGGA-GGGGAGTTGTGAACGTTCTGATGAAAAAAGTCAACATGAAAGCGCTTTGGTGATGGGCGCTGGTG---TTCATCCAACCACTTCCTGTGCATCT----CCCCGTCCGTCCAGCTGGGCTCAGTCCCCA-----CTGCTCAGCACTAGGCCGGCAGAATCTGAGCAATGTCTTCCACACTCCCTGCCCTGCTCTGCGTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCAGCAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTCCGGGTTCAGGCCAAGCTCCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCA-GGGTGCTGGCTTCCCAGGAGGGCTTGGGGCCAGCAGCTGGGTGGAGCCTAGGATTCCGGGGAGGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGTTCATCTGGGCCGAGCCCCATTTCATGGTTCCAAAGGAAAAGCAAGTGACTATCTGCTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCCCCTGAACGGATTAACAAAGTCAAATTCTACATCCTGGCCATGAACTCCCGCACGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCCCAGCAACTGGCTGGATCTGGTGGTAACAGG----TAACTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60566212 807 + 64156825 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGTCTTCCACGCTCCGTGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55691862 807 + 59248254 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCAGCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCATGCCCTGCTCTGCCTTGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCAAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGAGGGGGGCG-GGGTGCTGGCTTCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTATGGTTGGGGGGATGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCTGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805162 806 + 51301725 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGCGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCCGTGCCCTGCTCTGCCTCGGTGAGTTCCTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACGGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTCTGAGCCAGAGAATCAGCGCCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCG-TCCACCCAAGCACAGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTCCCCAGGAGGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCCATCATCAGGGCCGAATCCACTTACATGGTTCCGAAGGAAAAGCAAGCGACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGACCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCAATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGG----TAACTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47521777 810 + 50890351 CGTAGGCTCATGGTCAGA-GGTGGAGGGGGAGTGGTGAACGTTCTAATGAAAAAAGTCAACATGAAAGCTTCCTGGTGATGGGCGCTGGGG---CTCACCC-ACCACTTCCTGTGCATCT----CC----CTGGCCCGCTGGGCTCAGTCCCCACCCCGCTGCTCAGCACTCGGCCGGTAGAATCTGAGCGATGCCTTCCACGCTCTGTGCCCTGCTCTGCCTCGGTGAGTTCTTGCATGGAAGGGGAATGGGATCAGGGTGTGCCTGGGAG-------GCAACAGGTCTCATTATTCCCGTCTTCCAGGGCTGTGTTTGAGCCAGAGAATCAGCACCCCGAAGCGTGAGTCCTTCCTTCAAAGCC-CAGGGTCACTCTTTCGGGTTCAGGCCAAGCACCC-TCCACCCAAGCACGGCTGGGGAGA-GGGGGCG-GGGTGCTGGCTTTCCAGGAAGGCCTGGGGCCAGCAGCAGGGTGGAGCCTACGGTTGGGGGGACGGGGCTCAGCTGGAACTCCAGCCTCTGATTCCCTTCCAGAGACTCTCCCAAAACCGATCATCAGGGCCGAATCCACTTACATGGTTCCAAAGGAAAAGCAAGCAACCCTCTGTTGCCAGGGAAGTTATGGAGCTGTTGAATACCAGCTGCATTTTGAAGGAAGCCTTTTTGCCGTGGAGAGGCCAAAACCGCCTGAACGGATTAATGGAGTCAAATTCCACATCCCGGACATGAACTCCCGCAAGGCAGGGCGATACAGCTGCATCTATCGGGTTGGGGAGCTCTGGTCAGAGCGCAGCGACTTGCTGGATCTGGTGGTAACAGGTAACTAACTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870052 789 + 49145316 TGTAGGCTCACGGTCAGA-GGTGGA-GGGGAATTGTGAA-GTTCTTATGAAAAAAGTCAACGTGAAAGCCACATGGTAATGAGGGTTGGC----CTCATCT-ACCACTTCCTCTGCATCT----CC----CTGGCACACTGGGCTCAGTCACTACCCCACT------------GCCAGCAGAATCTGAGCGATGCCTTCCACACTCCCTGCCCTGCTCTGCCTCGGTGAGTTCTTGCCCGGATGGGGAATGGAATCAGGGTGTGCCTGGGAA-------GCAATAGGTCTCATTATTCCCATCTTGCAGGGCTGTGTCTGAGCCAGAGGATCAGCACCCAGCAGCGTGAGTCCTTCCTTCAAAGCT-TAGGGTCACTCTTACGGGTTCAGGCCAAGCACCC-TCCACCCAAATACAACTGGGAAGA-GGGGACA-GGGTGCGGGCTTCCCAGGAGGACTTAGGGCCAGCAGCTGGGTGGAGCCTAGGGT--GGGAAGGTGGGCTCAGCTGGGACTCCAGCATCTGATTCCCTTCCAGAGACTCTCCCAAAACCCTCCATCTGGGCCAAGCCCAGTTTCATGGTTCCAAAGGAAAAGCCGGCGACCATCTCTTGCCAGGGAAATTATGGGGCTGTTGAATACCAGCTGCATTTTGAAGGAAGTCTTTCTGCCGTGGAGAGACCAAAACCCCCTGAGCGCATTAACAAAGTAGAGTTTCACATCCCGGCCATGACGTCCCGCACGGCCGGGCGATACAGCTGCTTCTATCGGGTTGGGGAGCTCTGGTCAGAACCTAGCGACTCACTGGATCTGGTGGTAACAGG----TAAGTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 19988265 793 - 122678785 -------TCATGGTCAAA--GTACAGGGAAGACTGTGAGCCTTCTTAT--AAAAAGTCAGTGTGAAAGCCCCATGTCAAATAGTGTTGTTGGGCTTCACCC-ACCACATCCTGTGCA-CT----TA----CTGGCCTGCTGGGCTCAGTCTCCACTCAGCTCCTCCATATGTGCCTGGTATAATCAGTGCTATGACCTCTACACTCACTGCCCTTCTCTTCCTTGGTGAGTTCTTGCACACAGGGGAAACAGAATTCGGGAGT--CTGGGTGTGGGTGAGCGGCATGTCTCATTGTTCCTGTCTTCCAGGGCTGTACCTGAGCCAGACCACCAGCACCCAGAAGCGTGAGTCCCTTCTTCAGAGCCTCAGAATCTCTCTTCTGGGCTCAGATGCAGTATCTATCTATGAAACCAAAG-------GA-GGGGGCAGGGGCTCTGGTTTGCTAGGAGGGCTTGAGGCCAACA---GGGTAGAAATTTGCGT---GGGAAGGGACTTTATCTGGAACTCCAGCCTCTGATTCTCTTCCAGAGATTCTTTCAAAACCCATCATCTGGGTCAAGCCAAATTTCATGATTCCAAAGGGAATGCCAGTGTTGATCTGGTGCCAGGGGACTCCTGAGGCCATTGAATATCAGCTGCATCTTGAAGGACATCTCTATGCCCAGCAGAGCCCAAAACAACTTGAAAGGAGGAACACAGTCATGTTCCGCATCCCAAAAATGACCCTGCTCACTGCAGGGCAATACAGGTGCTTTTACCGAATCAAGGAGCTCTGGTCAAAGCCTAGTGACCCTCTGGATCTGGTGGTAACAGG----TAACTAT i canFam3.chr1 C 0 I 83 a score=457445.000000 s hg38.chr19_GL949753v2_alt 618966 166 + 796479 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCATCATCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC s panTro4.chr19 59828274 164 + 63644993 CCGGTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATGCAGCAGCATC--TGAACTCTTCCAAGCCCCACTCAGACACTGTTTGTCTCGGTAGGAGGCTGGAAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACCGTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741643 163 + 60714840 CCGCTTCTCTAACTGGAGAGTGATCTCAGTCTGCATCCGGGATACAG---CATCTATGAACTCTTCCAAGCCCCACTCAAACGCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAGTCCTTGCCTACAAGGGGTTGTCTGCAGACGGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279001 166 - 106955855 CCGGTTCTCTAACTGGAGAGTGATCTCCGTCTGCATCCGGGATGGAGCATCATCTATGAACTCTTCCAAGCCCCATTCAGACCCTGCTTGTCTCGGTAGGAGGCTGGGAGGAGGGGTGATCCCCATCACAATCCTTGCCTACAAGGGGTTGTCTGCAGACAGTGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567019 165 + 64156825 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692669 165 + 59248254 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCAGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCCCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47805968 165 + 51301725 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCCGGGATGGAGCATCATCTATAAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCGGTAGGAGGTTGG-AGGAGGGGTGATCCGCATCACAATCTCAGCCTACAAGGCGTTGTCTGCAGACAGTGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522587 164 + 50890351 CCGGTTCTCTAACTGGAGAGTGAGCTCAGTCTGCATCTGGGATGGAGCATCACCTATGAACTCTTCCAAGCCCCACTCAGACACTGCTTGTCTCAGTAGGAGGTTGG-AGGAGGGGTGATCC-CATCACAATCTCAGCCTACAAGGCGTTGTCTGCAAACAGTGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45870841 164 + 49145316 CCCGCTCCGTAACTGGAGAGTCAGCTCAGTCTACCGCCGGGATGGAGCCTCATCTATTAACTCTTCCAAGCCCCACTCAGACGCTGCTTCTCTCGGAAGGAGGTTGGGTGGACGGATG-TACTCATCAC-GTCCCTGCCTACAAGGGCTTGTCTGCAGACAGCGTC i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989058 83 - 122678785 I a score=146029.000000 s hg38.chr19_GL949753v2_alt 619132 42 + 796479 TCTACGTCCTAGGAGCAGATGTGTCCTCAGTCAGTTTCTCCA s panTro4.chr19 59828438 42 + 63644993 TCTACATCCTAGGAGCAGATGtgtcctcggtcagtttctcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741806 42 + 60714840 TCTACGTCCTAGGCGCAGATGTGTCCTCAGTCAGTTTCTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279167 42 - 106955855 TCTATGTCCTAGGAGCAGATGtgtcctcggtcagtttctcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567184 42 + 64156825 TCTATGTCCTATGAGCAGATGtgtcctcggtcaagttctcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692834 42 + 59248254 TCTATGTCCTATGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806133 42 + 51301725 TCTATGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522751 42 + 50890351 TCTGTGTCCTACGAGCAGATGTGTCCTCGGTCAAGTTCTCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871005 42 + 49145316 TCTATGTCCTAGCAGCAGATGtgtcctcggtcaagttctcca i calJac3.chr22 C 0 C 0 s canFam3.chr1 19989141 42 - 122678785 TCTATGACCTAGAGGCAGATTTGTCATAGGTCAGGTTCTCCA i canFam3.chr1 I 83 I 1526 a score=977276.000000 s hg38.chr19_GL949753v2_alt 619174 359 + 796479 TGACACAGATTCTGAGATAGATATTTGTATGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAATGCCTGTGGGCTAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGttt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggatcacaggcacccaccactac-----gccacattttgtatttttagtagagatggggtttcaccatgttggccagggtggtgtcgaactcctgacc s panTro4.chr19 59828480 359 + 63644993 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaatgtcctcaaaaacaatgcctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGGtt---------tttttttttttatctgttttgagacggagtttcgctcttgtcacccaggctggagtgcagcggtgcaatctccagtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcacccaccactac-----gccagattttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56741848 338 + 60714840 AGACACAGATTCTGAGATAGATATTTGTGTGC-------------AGGAATGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTTACAC--TGCTTCCCTCACCCATCACAGGTGTT-GGAG---------------ttttttaatctgttttgagacggagtttcactcttgtcacccaggctggagtgcagtggtgcaatctccagtcactgcaacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttgaccagggtggtctcaaactcctgacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279209 353 - 106955855 agacatagattctgagatagatatttgggtgcaggggtataactgaggaatgtcctcaaaaacaacacctgtggGCCAGGCGCAGTGGCTTACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG--------------ttttttttatctgttttgagatggagtttcgttcttgtcacccaggctggagtgcagtggtgcaatctccagtcact-caacctccacctcctgggttcaagcgattctccagcctcagcttcccaagtagctgggattacaggcacccaccaccat-----gccagtttttgtatttttagtagagatggggtttcaccatgttggccagggtggtctcgaactcctgacc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567226 352 + 64156825 agacacagattctgagatagatatttgtgtgcaggggtatgactgaggaacgtcctcaaaaacaacgcctgtggGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaacttctgacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55692876 352 + 59248254 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAACGTCCTCAAAAACAACGCCTGTGGGCCAGGCGCAGTGGCTAACACTTTGCTTCCCTCACCCATCACAGGTGGT-GGGG---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagcagctgggattacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806175 351 + 51301725 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTATGACTGAGGAATGTCCTCAAAAACAACGcctgt-ggccaggcgcagtggctaacacTTTGCTTCCCTCACCCATCACAGGTGGT-gggg---------------tttttgtgtttgttttgaga-agagtttcactcttgtcacccaggttggagtgcaatggtgcagtctcccatcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtagctgggattacaggcgaccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47522793 350 + 50890351 AGACACAGATTCTGAGATAGATATTTGTGTGCAGGGGTGTGACTGAGGAACGTCCTCAAA---AACGCCTGTGGGCCAGGCGCAGTGGCTGACACTTTGCTTCCCTCACCCATCACAGGTGGTGGGGG---------------tttttgtgtttgttttgaga-ggagtttcactcttgtcacccaggttggagtgcagtggtgcagtctcccgtcactgcaacctccacctcctgggttcaagtgattctccagcctcagcttcccaagtggctgggatgacaggcgcccaccaccac-----gccaatttttgtatttttggtagagacagggtttcactatgttgaccagggtggtctcaaactcctgacc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871047 370 + 49145316 agaaacagattctgagatagatatttgtgtgcaggagggtgactgacaaatgtcctcaacagcatcgcctgtggGCCAGGCGCAGTGGCTTAGGCCTTGCTTTCCTCATCCATCACAGGTGAT-GGGTTTAAAAAAATATATTTTGGCtttttttttttcaga--cagtcttgctctgctc-cccaggctggagtgcagtggtgcaatctcagctcactgccacctctacctcctggattcaagcaattatcctgcctcggtctcccaagtagttgggactacaggcacctgccaccatgtctggctaatttttgcatttttagtagggatgggatttcaccatgtcagccaggctggtctcgaactcctgacc i calJac3.chr22 C 0 I 487 e canFam3.chr1 19989183 1526 - 122678785 I a score=201021.000000 s hg38.chr19_GL949753v2_alt 619533 92 + 796479 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcacacccagccAGGTGGTGGTTTTCTaaaaaa-----aaa s panTro4.chr19 59828839 92 + 63644993 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcctagccAGGTGGTGTTTTTCTAAAAAA-----AAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742186 92 + 60714840 tcagatgatccgcctgcctcaccctcccaaagtgctgggattacaggtgtgagccattgcgcccagccAGGTGGTGGTTTTCTAAAAAA-----AAA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103279562 87 - 106955855 tcagatgatccgcccgcctcaccctcccaaagtgctgggattacaggtgtgagccatcgcgcccagccAGGTGGTGTTTTTCTAAAA---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60567578 94 + 64156825 tcaggtgatcctcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAACAAAA--- i rheMac3.chr19 C 0 I 611 s macFas5.chr19 55693228 89 + 59248254 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47806526 88 + 51301725 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagcc-tcacACCTGGCCAGGTGgtgtttttctaaaaaa-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523143 89 + 50890351 tcaggtgatccgcccgcctcagcctcccaaagtgctgggattacaggtgtgagtcatcgcgcctggccAGGTGGTGTTTTTCTAAAAAA-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I a score=546.000000 s hg38.chr19_GL949753v2_alt 619625 2 + 796479 aa s panTro4.chr19 59828931 2 + 63644993 AA i panTro4.chr19 C 0 I 6 s nomLeu3.chr10 103279649 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e chlSab2.chr6 47523232 0 + 50890351 C e papAnu2.chr19 47806614 0 + 51301725 C e macFas5.chr19 55693317 0 + 59248254 C e rheMac3.chr19 60567672 611 + 64156825 I a score=19961.000000 s hg38.chr19_GL949753v2_alt 619627 24 + 796479 aaaaaaTTAGCTTTTTTTTTTTTT s nomLeu3.chr10 103279651 24 - 106955855 AAAAATTTAGCttttttttttttt i nomLeu3.chr10 C 0 I 116 s macFas5.chr19 55693317 24 + 59248254 CAAAATTTAGCttttttttttttt i macFas5.chr19 C 0 I 502 s papAnu2.chr19 47806614 24 + 51301725 caaaatttagcttttttttttttt i papAnu2.chr19 C 0 I 498 s chlSab2.chr6 47523232 24 + 50890351 CAAAATTTAGCttttttttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=91.000000 s hg38.chr19_GL949753v2_alt 619651 1 + 796479 A s chlSab2.chr6 47523256 1 + 50890351 a i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=0.000000 s hg38.chr19_GL949753v2_alt 619652 1151 + 796479 ACaatatggttgtttattattattatcaagtattatacatagttacatatacatacataattgtatgtgctatacaattaggtttgtttataccagcaacaccaaaaacacatgagcaatactttgtgctaggaaggctatgatgtcatcaggcaataggaatttttcagtttcattataatcttatgggaccaccatcatatatgtggtacattgttggccaaaatgtcattatgcagctcacaacAGtatttcatgtccattcaaatatcttcttttgtgaaatgtctatttaaatcttttgcctatttttaaattgggttgcttatattttgattgattaggaaaagttatttctatattctgtgtcatatacttgtgttgaaatatatatattttttgtctgtgccttttcatttgctcagggtctttggaccttgtttggaggttctggcaggggaacacagctactcatttattcttTTttttttaatttttttagtatttattgatcattcttgggtgtttctcggagagggggatttggcagggtcataggacaatagtggagagaaggtcagcagataaacatgtgaacaaaggtctctggctttcctaggcagaggtccctgcggccttccgcagtgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacatagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatcccaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctatgtctacttctttctacacagacacagtaacaatctgatctctctttcttttccccacatttcccctttttctattcgacaaaaccgccatcgtcatcatggcccattctcaatgagctgttgggtacacctcccagacggggtggcggccgggcagaggggctcctcacttcccagacggggcggccgggcagaggcgcccccccacctcccagacggggcagtggccgggcgggggctgccccccaacctcccggacggggcggctggccggg e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742278 4 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=655.000000 s hg38.chr19_GL949753v2_alt 620803 7 + 796479 gcttttt s ponAbe2.chr19 56742282 7 + 60714840 GCttttt i ponAbe2.chr19 I 4 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I e panTro4.chr19 59828933 6 + 63644993 I a score=3332.000000 s hg38.chr19_GL949753v2_alt 620810 13 + 796479 ttttttttttttg s panTro4.chr19 59828939 13 + 63644993 ttttttttttctg i panTro4.chr19 I 6 C 0 s ponAbe2.chr19 56742289 13 + 60714840 ttttttttttttg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523257 0 + 50890351 C e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=30025.000000 s hg38.chr19_GL949753v2_alt 620823 56 + 796479 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc s panTro4.chr19 59828952 58 + 63644993 ggacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctcactgcctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742302 56 + 60714840 agacagtctcgctgcagtgcagtggtgcaatctcagctcactgcaacctc--tgcctc i ponAbe2.chr19 C 0 I 14 s chlSab2.chr6 47523257 56 + 50890351 agacagtctcgctgcagtgcagtggtacaatctcagctcactgcaacctc--tgcctc i chlSab2.chr6 C 0 I 14 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=-172.000000 s hg38.chr19_GL949753v2_alt 620879 8 + 796479 --agcctcaa---- s panTro4.chr19 59829010 14 + 63644993 ccaggttcaagcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e ponAbe2.chr19 56742358 14 + 60714840 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523313 14 + 50890351 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=64852.000000 s hg38.chr19_GL949753v2_alt 620887 124 + 796479 ttctcctgcctcagcctcccaagtagttgagattacaggcatgtgccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccaggctggtctcaaactcctg s panTro4.chr19 59829024 124 + 63644993 ttctcctgcctcagcctcccaagtagttgggattacaggcatgggccaccacacccggctaatttttgcatttttagtagagacggggtttcaccatgttgaccagtctggtctcaaactcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742372 124 + 60714840 ttctcctgcctcagcctcccaagtagttgcaattacaggcatgggtcaccacacccggctaatttttgcatttttagtagagacagggtttcaccatgttgaccaggctggtctcaaactcctg i ponAbe2.chr19 I 14 C 0 s chlSab2.chr6 47523327 124 + 50890351 ttctcctgcctcagcctcccaagcagttgggtttacaggcataggccaccacgcctggctaatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctg i chlSab2.chr6 I 14 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e papAnu2.chr19 47806638 498 + 51301725 I e macFas5.chr19 55693341 502 + 59248254 I e rheMac3.chr19 60567672 611 + 64156825 I a score=88498.000000 s hg38.chr19_GL949753v2_alt 621011 94 + 796479 acccaggaggtcgagtcttcagtaagcaaagatagtgccacggcgctccagcctgggaaacagagcaagaccctgtatc---------atttttaaaaaTGGT s panTro4.chr19 59829148 94 + 63644993 acccaggaggtcgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacagagcaagaccctgtatc---------aTTTTTTAAAATGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742496 89 + 60714840 acccaggaggttgaggcttcagtaagccaagatagtgccacggcgctccagcctggggaacacagcaagaccctgtatc---------attttaaaaa----- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55693843 100 + 59248254 acccaggaggtagaggttgcagtgaaccgagattgtgccattgcactccagcctgggtgacagagcaagactccatctc---aaaaaaaaaaaaacaaaTGGT i macFas5.chr19 I 502 C 0 s papAnu2.chr19 47807136 103 + 51301725 acccaggaggtagaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagcaagactccgtctcaaaaaaaaaaaaaaaaaaaatggt i papAnu2.chr19 I 498 C 0 s chlSab2.chr6 47523451 94 + 50890351 acccaggaggtcgaggcttcagtgagccaagatagtgccatggcactccagcctggggaacagagcgaggccctgtacc---------attttaaaaaaTGGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e rheMac3.chr19 60567672 611 + 64156825 I a score=73732.000000 s hg38.chr19_GL949753v2_alt 621105 48 + 796479 TTTAGACGGTAAATCTTCTATTGTGTGTATTTGACCaaaataataatt s panTro4.chr19 59829242 48 + 63644993 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAATT i panTro4.chr19 C 0 I 8 s ponAbe2.chr19 56742585 36 + 60714840 -----aCGGTAAATCTTCTATTGTGTGTATTTGACCaaaaa------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568283 48 + 64156825 TTTAGATGGTAAATCTTCTATTGTGTGTATTTGACCaaaataataata i rheMac3.chr19 I 611 I 3 s macFas5.chr19 55693943 47 + 59248254 -TTAGATGGTAAATCTTCTATTGTGTGTATTTGACCAAAATAATAATA i macFas5.chr19 C 0 I 555 s papAnu2.chr19 47807239 47 + 51301725 -ttagatGGTAAATCTTCTATTGTGTGTATTTgaccaaaataataatt i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47523545 47 + 50890351 -TTAGATGGTAAGTATTCTATTGTGTGTATTTGACCAAAATAATAATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=4095.000000 s hg38.chr19_GL949753v2_alt 621153 3 + 796479 aaa s panTro4.chr19 59829298 3 + 63644993 aaa i panTro4.chr19 I 8 C 0 s ponAbe2.chr19 56742621 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568334 3 + 64156825 aaa i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55694545 3 + 59248254 AAA i macFas5.chr19 I 555 C 0 s papAnu2.chr19 47807295 3 + 51301725 aaa i papAnu2.chr19 I 9 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e calJac3.chr22 45871417 487 + 49145316 I e nomLeu3.chr10 103279675 116 - 106955855 I e chlSab2.chr6 47523592 0 + 50890351 C a score=14847.000000 s hg38.chr19_GL949753v2_alt 621156 10 + 796479 a----aaaaaa------aaa s panTro4.chr19 59829301 10 + 63644993 a----aaaaaa------aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742624 10 + 60714840 a----aaaaaa------aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60568337 10 + 64156825 a----aaaaaa------aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694548 10 + 59248254 A----AAAAAA------AAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807298 10 + 51301725 a----aaaaaa------aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523592 20 + 50890351 ATTTTAAAAAATTTTTTAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871904 10 + 49145316 a----aaaata------caa i calJac3.chr22 I 487 C 0 e canFam3.chr1 19989183 1526 - 122678785 I e nomLeu3.chr10 103279675 116 - 106955855 I a score=542563.000000 s hg38.chr19_GL949753v2_alt 621166 217 + 796479 aaGCTGGCTgccaggcatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcagaggttgcagtgagccaagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaagaaa------------------------------------------------------gaaaaaaa-----------aaaaTAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA s panTro4.chr19 59829311 223 + 63644993 aaGCTGGCTgccaggcatggtggcaggcccctgtagtcccagctacttggaagggtgaggcaggagaaatgcttgaatccgggaggcggaggttgcagtgagccgagatcgtgtcactgcactccagcctgggcgacagagagagactccatctc-----------------------------------taaaaaaaagaaaa------------------------------------------------gaaaaaaa-----------aaaaTAGCTGGCTGCTCATCACTGAGTTTCTGGTGTGGTGGCCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742634 211 + 60714840 aaGCTGGCTgccagacatggtggcaggcccctgtagtcccagctacttgggagggtgaggcaggagaaacgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgtcactgc-------------------agcgagactccatctc-----------------------------------taaaaaaaaacaaagaaaa-----------------------------------------ggaaaaaaaa-----------CAAATAGCTGGCTATTCACCACTGAGTTTCTGGTGTGGTGGCCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103279791 227 - 106955855 AAACTGGCTgccagacatggtggtaggcccctgtagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggaggtttcagtgagccgagattgcgtcactgcactccagcctgggcgacagagcgagactccatctc-----------------------------------taaaaaaagaaagaaaag--------------------------------------------aaaaaaag-----------caaaTAGCTGGCTGCCCATCACTGAGTTTCTGGTGTGGTGGTCCCA i nomLeu3.chr10 I 116 C 0 s rheMac3.chr19 60568347 244 + 64156825 aaGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaacgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgtcagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694558 244 + 59248254 AAGCTGGCTgccaggcatggtggcaggccgctgcagtcccagctacttgggaggctgaggcaggagaaatgcttgaacccaggaggcggagactgcagtgagccaagatcgcatcactgcactccagcct-ggcgacagagcgagactccgtctc-----------------------------aaaaaaaaaaaaaaaaaagaaaagaaaaGAAAGG--------------------------------AGAAAATATA-----------CAAATAGCTGGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807308 238 + 51301725 aagctggctgccaggcatggtggcaggccgctgcagtcccagctcctcgggaggctgaggcaggagaaacgcgtgaacccaggaggcggagactgcagtgagccaagatcgcgccactgcactccagcct-ggcgacagagcgagattccgtctc-----------------------------------aaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaatagctgGCTGCTCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523612 274 + 50890351 AAGCTGGCTgccaggcatggtggcgggccgctgcagttccagctacttgggaggctgaggcaggagacccgcttgaacccgggaggtggaggttgcagtgagccaagatcgcgtctctgcacttcagcttgggtgacagagcgagactccttctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaagaaaagaaaagaaagg--------------------------------agaaaatata-----------caaaTAGCTGGCTGCCCATCTCTGAGTTTCTGGTGCGGTGGCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45871914 279 + 49145316 aatttagtt---aggcgtggtggcaggcacctgtcgtcccagccactcaggaggctgaggcaggagaaacacttgaacccggcaggcggaggttgcactgagctgagatcacgccactgcactccagcctgagcaacagagtgagatgccatctc-----------------------------------TCAAACAGATAAATACATTTAAAAATGGCTTAGATGGTAAATCTTCTAAAATAATTTGACCAAAATAATAATAATTTTTCTAAAACAGCTGGCTGCTCATCACTGAGTTTCTGGTGCGGGGACCCCG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19989183 1526 - 122678785 I a score=1356635.000000 s hg38.chr19_GL949753v2_alt 621383 381 + 796479 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACCGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- s panTro4.chr19 59829534 381 + 63644993 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCACGTACAGCGCGGATATGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCTTCGCCGC--CA---TGTCCTACCTGGAGCCCTGAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56742845 383 + 60714840 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGCCGCGTACAGCGCAGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGATGCTCAATTCCCCCCGCCCCCCCCCGCCACA---CATCCTACCTGGAGCCCT-AAGGATCCCCAGAGAGTGATGGGGGAGGGTGTC---------- i ponAbe2.chr19 C 0 I 1366 s nomLeu3.chr10 103280018 381 - 106955855 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGATCTCGGGAGAGAAGGTGACCTTCTACTGCCGTCTAGACACTGCAACAAGCATGTTCTTACTGCTCAAGGAGGAAAGATCCACCCACGTACAGCGCGGATACGGGAAGGTCCAGGCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAAGCATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACACCCCCCACCGC--CA---TGTCCTACCTGGAGCCCTAAGGGATCCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568591 381 + 64156825 CCTTCTCTCATAGAAATGTATGACACACCCACGCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCGTGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-AGGGAGGGTGTC---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55694802 381 + 59248254 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CG---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAC-GGGGAGGGTGTC---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807546 381 + 51301725 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCTTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTACGGGAAGGTCCAGGCAGAGTTCCCCATGGGCCCGGTGACCACAGCCCACAGAGGGTCATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CA---TGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47523886 384 + 50890351 CCTTCTCTCATAGAAATGTATGACACACCCACCCTCTCGGTTCATCCTGGACCCGAAGTGACCTCGGGTGAGAAGGTGACCTTCTACTGCCGTCTAGACACAGCAACAAGCATGTTCCTACTGCTCAAGGAGGGAAGATCCAGAGACGTGCAGCGCAGCTATGGGAAGGTCCAGGCGGAGTTCCCCATGGGCCCTGTGACCACAGCCCACAGAGGGACATACCGATGTTTTGGCTCCTATAACAACTATGCCTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAAATGCTCAATTCCCCACAGCCCCCGCCGC--CGCCATGTCCTACCCGGAGCCCTAAGGGATGCCCAGAGAGTGAT-GGGGAGGGTGTC---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872193 377 + 49145316 CCTTCTCTCGTAGGAATGTATGACACGCCCACCCTCTCAGTTCATCCCAGACCGGAAGTGATCTCGGGCGAGAAGGTGACCTTCCATTGCCGTCTGGGGACTGCAACAAGCACCTTCTTTCTGCTCAAGGAGGGAAGATCCAG---CGTACGGCGCGGATACGGGAAGGTCCAGGCCGAATTCCCCTTGGGCTCTGTGACCACATCCCACAGAGGGACATACCGATGTTTTGGCTCCTACAACAACCATGCGTGGTCTTTCCCCAGTGAGCCAGTGAAGCTCCTGGTCACAGGTGAGGAGA-GCCCCGGTTCCCACACCTCCCGCTGC--CA---TGTCGTACCTGGAGCCCTAAGGGATCTCCAGATCGTGAT-GGGGAGGGTATC---------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 19990709 380 - 122678785 CCTTCTCCCACAGGAATGTATGATACGCCCACTCTCTCCGTTCATCCCGGGAATAAGGTGATTTCGGGAAAGAACGTGACCTTCTCTTGCCGTCTAGACACTGCAACAAACAAGTTCTTTCTGCTCAAGGAGGGACGATCCAGCCACCCACAACACAGATATGGGAACATCCAGGTGGAGTTTCCCATAGGCCCTGTGACCACAGCCCACAGAGGGACGTACAGATGTTTTGGATCTTATAACAACCATGCGTGGTCTTTCCCCAGTAAGCCTGTGAAACTCCTGGTCACAGGTGAGGAAACTCCCAGATTTCCCC-----------T--CA---TGTCCCCTCTGGAACCCCAAGTAAACCCTGACCAGTGAT-GAGGAAGGGACAGGTGGGAAAC i canFam3.chr1 I 1526 C 0 a score=171318.000000 s hg38.chr19_GL949753v2_alt 621764 80 + 796479 CAAGGG---------------------------ACGTCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA s panTro4.chr19 59829915 80 + 63644993 CAAGGG---------------------------TCATCCACTTCCTGGGTGCCTGGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280399 80 - 106955855 CAAGGG---------------------------ACGTCCACTTCCTGGGGATCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60568972 80 + 64156825 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695183 80 + 59248254 CAAGGG---------------------------ACGTCCACTTCCTGGGAGCCCAGTTGGTCATG--TGACGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807927 56 + 51301725 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGT--------------------------aag--caggaaggaggagggagcagaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524270 80 + 50890351 CAAGGG---------------------------ACGTCCACTTCCCGGGAGCCCAGTTGGTCATG--TGAGGAAGAACACCAGAAG--CAGGAAGGAGGAGGGAGCAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872570 80 + 49145316 AAAGGG---------------------------ACGTTGGCTTCCTGGGGGCCCAGGTGGTGGTG--TGAGGAAGATCACCAGAAA--CAGGAAGGAAGAAGGTGCAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991089 111 - 122678785 CACGGAGAGCATCTCGCTCCAGCACCCTCATCCACATGCATTTTGTGGAGGCCCATTTGATTGTTCCTGAGGAAGAAGGCCAGAGGGACAAGAAGAGGGAGGGCCCAGAGA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=25571.000000 s hg38.chr19_GL949753v2_alt 621844 10 + 796479 AAGGAATGGT s panTro4.chr19 59829995 10 + 63644993 AAGGAATGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280479 10 - 106955855 AAGGAATGGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569052 10 + 64156825 AAGGAATGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695263 10 + 59248254 AAGGAATGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807983 10 + 51301725 aaggaatggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524350 10 + 50890351 AAGGAATGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872650 10 + 49145316 AAGAAATGGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I a score=250356.000000 s hg38.chr19_GL949753v2_alt 621854 132 + 796479 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacagaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc s panTro4.chr19 59830005 132 + 63644993 Aaggcgggtggatcacaaggtcaggagttcgagaccagcctggccaagacggtgaaaccccgtctctactaaaaatacaaaaattagccagacgcagtggcggacacctgtagtcccagctactcaggaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280489 132 - 106955855 Aaggcaggtggatcatgaggtcaggagttcgagaccagcctggccaagacagtgaaaccccatctctactaaaaatacaaaaattagccagacgcagtggtggacacctatagtcccagctactcaggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569062 132 + 64156825 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacagtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695273 132 + 59248254 Aaggcgggtggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47807993 132 + 51301725 aaggcgggcggatcacgaggtcaggagttcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524360 132 + 50890351 Aaggcgggcggatcacgaggtcaggaggtcgagaccagcctggccaagacggtgaaaccctgtctctactaaaaatacaaaaattaaccagacggagtggcggacacctgtagtcccagctactcaggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991200 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=24444.000000 s hg38.chr19_GL949753v2_alt 621986 9 + 796479 tgaggcagg s panTro4.chr19 59830137 9 + 63644993 tgaggcagg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280621 9 - 106955855 tgaggcagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569194 9 + 64156825 tgaggcagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695405 9 + 59248254 tgaggcagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808125 9 + 51301725 tgaggcagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524492 9 + 50890351 tgaggcagg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19991200 9 - 122678785 TGAGGCAGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=190776.000000 s hg38.chr19_GL949753v2_alt 621995 121 + 796479 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaa-gaaTGGC s panTro4.chr19 59830146 116 + 63644993 agaatcgcttgaacccgggaggcgggggttgtagtgaaccgagatcataccaccgcactgcaacctgggcgacagagcaagactccatctc-----aaaaaaaaaaaaaaaaaa-gaaTGGC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280630 120 - 106955855 agaatcgcttgaacctggcaggtggaggttgcagtaagccgagatcgtgccactgcactccagcctgggtgacagagaaagactccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaaTGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569203 121 + 64156825 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-caaaaaaaagaaaaaaaaaaaaTGAATGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695414 116 + 59248254 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcaacacagcaagattccatctc-aaaaaaaaaaaaaaaaaa-----gaaTGGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808134 120 + 51301725 agaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcataccactgcactgcaacctgggcgacacagcaagattccatctc-aaaaaaaaaaaaaaaaaaaaaa-gaatggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524501 112 + 50890351 agaatcgcttgaacccaggaggtagaggttgcagtgagccgagatcataccactgcactacaacctgggcaacacagcaagattccatcta-caaaaaaaaaaaaa---------gaaTGGC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991209 0 - 122678785 C e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45872660 0 + 49145316 C a score=504229.000000 s hg38.chr19_GL949753v2_alt 622116 186 + 796479 AAGACCGGAGGAAACCAAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCAATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATTC s panTro4.chr19 59830262 186 + 63644993 AAGACCGGAGGAAACCCAAAACCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGACGAGCGATCAGAGCCTCCCAGTGACACTAAAAACGTGGCATTCATTCAAAATATTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280750 185 - 106955855 AAGACTAGAGGAAACCCAAAACCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGTGACATTGAGAACACCAGCCTTGCACCTGAAGACCCCA---CCTTTCCTGGTGAGTAACTGCTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAATGATACTAAAAACGTGGCATTCATTCAAAATATTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60569324 185 + 64156825 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGGCGACACTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCAGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695530 186 + 59248254 AAGACTGGAGGAAACCCAAAATCCTTACTTTTTTTTCTTTATCTCCTTTTCCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808254 185 + 51301725 aagaCTGGAGGAAACCCAAAatccttac-tttttttctttatctccttttcCAGGCGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCGCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524613 185 + 50890351 AAGACTGGAGGAAACCCAAAATCCTTAC-TTTTTTTCTTTATCTCCTTTTCCAGACGACATTGAGAACACCAGCCTTGCACCTACAGACCCCA---CCTTTCCCGGTGAGTAACTAGTCCTTCTAAGCTCAGAGGAGAGATCAGAGCCTCCCAGGGACACTAAAAACATGGCATTCATTCAAAATATTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872660 185 + 49145316 CAGACCAGGGGAAACTCAAAAGCCTTCC-TTACGTTCTTCATCTCCTTTTCCAGGTGACACAGAGAATACCAGCCTGGCACCTACAGACCCCA---CCTCTCCTGGTGAGTAACTGGTCCTTCTAAGCTCAGAGGAGGAATCAGAGGCTCCCAATGACACTAAAAACGGGGCATTCATTCAAAATATTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 19991209 186 - 122678785 AAGACCGGAGGAAACCCAAAACCCTCA--TGGTTTTCTTTGTTTCCACTGCCAGAAGGTGTTGGGGACACCAGCCTTGTACCCACAGAACATACATCTTTTTCTGGTGAGTAACAGGTATTTCTAAGCCTGGGGAAGGGAGCAAAGCCTCCCAGTG-CATTAAAAACATGGCATTTGTTCAAAATATCC i canFam3.chr1 C 0 I 703 e ponAbe2.chr19 56743228 1366 + 60714840 I a score=79478.000000 s hg38.chr19_GL949753v2_alt 622302 37 + 796479 ATCGAggccaggcgtggtggctcacgcctgtaatccc s panTro4.chr19 59830448 37 + 63644993 ATCGAggccaggcgtggtggctcacgcctgtaatccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103280935 36 - 106955855 GTCGAGGCTGGGCGCGGTGGCTCA-GCTTGTAATCCC i nomLeu3.chr10 C 0 I 807 s rheMac3.chr19 60569509 37 + 64156825 ATCGAggccaggagcagtggctcacgcctgtaatccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55695716 37 + 59248254 ATCGAggccaggagcagtggctcacgcctgtaatccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808439 37 + 51301725 attgaggccgggcgcggtggctcacgcctgtaatccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524798 37 + 50890351 ATCGAggccaggcgcggtggctcacgcctgtaatccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872845 37 + 49145316 ATCAAggctgagcatggtggctcactcctataatccc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I a score=29718.000000 s hg38.chr19_GL949753v2_alt 622339 16 + 796479 agcactttgggaggcc s panTro4.chr19 59830485 16 + 63644993 agcactttgggaggcc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60569546 16 + 64156825 agcactttgggaggcc i rheMac3.chr19 C 0 I 1121 s macFas5.chr19 55695753 16 + 59248254 agcactttgggaggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808476 16 + 51301725 agcactttgggaggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524835 16 + 50890351 aacactttgggaggcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872882 16 + 49145316 agcacgctgggaggcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I a score=165696.000000 s hg38.chr19_GL949753v2_alt 622355 151 + 796479 gagat-ggtgcatcatttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaacttag---gctgggcatcatggctcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac s panTro4.chr19 59830501 151 + 63644993 gagat-ggtgcatcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaacttag---gctgggcatcatgactcacacctgtaatcccaacacttcgggaggccaaggtggttggatcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695769 151 + 59248254 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcactatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808492 151 + 51301725 aggat-ggtgcatcacttgaggtcaggagttcaagaccagcccggccaacatggcgaaaccccatctctactaaaaatacaaaaattag---gctgagcaccatggctcagtcctgtaatcccagcactttgggaggctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47524851 151 + 50890351 gggat-ggtgcatcacttgaggtcaggagttcaagaccagcctggccagcatggcaaaaacccatctctactaaaaatacaaaaattag---gctgggcaccatggctcactcctgtaatcccagcactttgggaggctgaggcaggcagatcac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45872898 151 + 49145316 gagatgggtgcatcacttgaggtcaggagttcgagaccagcctggccaacatagtgaaaacctgtctctactaaaaatacaaaaattagtcagctgtg-gtaatgg---acacctgtaatccgagctactctggaggctgaggcaggagaatcgc i calJac3.chr22 C 0 I 598 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=159239.000000 s hg38.chr19_GL949753v2_alt 622506 186 + 796479 aaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcagaggttgcagtgagctgagatcgcgccactgcattcca s panTro4.chr19 59830652 186 + 63644993 aaggtcaggaattcaagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcctggtggtgctcgcctgtaatcccagctactcaggaggctgaggcaggagaattg-ttgaacctgggatgcggaggttgcagtgagctgagatcgcgccactgcattcca i panTro4.chr19 C 0 C 0 s macFas5.chr19 55695920 187 + 59248254 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaaccagggaggcggaggttgcagtgagctgagattgcaccattgcactcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47808643 187 + 51301725 aaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggtactcacctgtaatcccagctacttgggaggctgaggcaggagaatggcttgaaccagggaggcagaggttgcagtgagctgagatcacgccactgcactcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47525002 187 + 50890351 aaggtcaggaattcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtactcacctgtaatcccagctacttaggaggctgaggcagaagaatcgtttgaaccagggaggcagaggttgcagtgagctgagattgcgccattgcactcca i chlSab2.chr6 C 0 I 817 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=15465.000000 s hg38.chr19_GL949753v2_alt 622692 51 + 796479 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa s panTro4.chr19 59830838 51 + 63644993 ctccactgcacgacacagcgagactccatctcacagaaaaacaaaaacaaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696107 48 + 59248254 ---gcctgggcaatagagacagattctgtctcaaaaaaaaaaaaaaagaaa i macFas5.chr19 C 0 I 280 s papAnu2.chr19 47808830 48 + 51301725 ---gcctgggtgacagagcgagactccatctcacaaaaaaaacaaaagcaa i papAnu2.chr19 C 0 I 1 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=573.000000 s hg38.chr19_GL949753v2_alt 622743 2 + 796479 aC s panTro4.chr19 59830889 2 + 63644993 aC i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47808879 2 + 51301725 ac i papAnu2.chr19 I 1 I 162 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=72299.000000 s hg38.chr19_GL949753v2_alt 622745 305 + 796479 TAT--TATATata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcagatatcttgactctgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacacaggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagagaaagaaggcatctgagcaaatgcgttcagacttgagttaatcatgtggctgtcag s panTro4.chr19 59830891 306 + 63644993 TATTATATATata----tatattcatcaagtgcatagtatacacagtgaactacactgtaacagtcagccaggcaaatatcttgacggtgcagcacttagattctagcaggaggagacacaccatcggtcaacgtcaggatagcacataggagggaatgatgctatggaaggaaaagacaaagtagaacagacttacagtgattgaaatggcagctagcaatattaaataggtttgtccagatggacctcacagag-aagaaggcatctgagcaaatgcgttcagactggagttaatcatgtggctgtcag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47809043 307 + 51301725 tattatatatataattttatatatatatagtgcatagtatataCGGTGAACTACACTGTAACAGTCAGCCAGGCAACTATCTTGACTCTGTGGCACTTAGATTCTAGCAGAAGGAGACAGACCATGGATCAATGTCAGGATAGCACATAGGAGGAAATGATGCTATGGAAGGAAAAGACGAAGTAGAACAGACTTACAGGGACTGAAATGGCAGGTAGCAGTATTAAATAGGGTTGTCCAGATGGACCTCACAGAG----AAGGCATCTGAACAAATGCGTTCAGACTTGAGTTAGTCACGTGGCTCGCAG i papAnu2.chr19 I 162 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e macFas5.chr19 55696155 280 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=74852.000000 s hg38.chr19_GL949753v2_alt 623050 155 + 796479 gagaaaggaggctctggagagaatgaaatggcatctgcctgtgccctggggcaggaagataactggggtaatacaataataactatgaggccaggagggttgaaAATGATGTTTGGAAGATGAC------GGTGGGATGGGCCTGGGGC-GCACGGCTAGGA s panTro4.chr19 59831197 155 + 63644993 gagaaaggaggctctggacagaatgaaatggcatctgcctgtgccctggggcaggaagataactggggtaatacaataataactatgaggccaggagggttgaaAATTATGTTTGGAAGATGAC------GGTGGGATGGGGCTGGGGC-GCACGGTTAGGA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55696435 161 + 59248254 gagaaaggaggctccagagagag-gaaatggcctctgcctgtgccctggggcaggacgatgactggggtaataaaataataactatgaggccaggagggttgaaAATGATGTTTGGAAAATGACAGTGGGGATGGGATGGGGCTGGGGCTGCACGGTTAGGA i macFas5.chr19 I 280 I 6 s papAnu2.chr19 47809350 161 + 51301725 GAGAAAGGAGGCTCCAGAGAGAG-GAAATGGCCTCTGCCTGTGCCCTGGGGCAGGACGATGACTggggtaataaaataataactatgaGGCCAGGAGGGTTGAAAATGATGTTTGGAAAATGACAGTGGGGAtgggatggggctggggctgcACCGTTAGGA i papAnu2.chr19 C 0 I 5 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=25983.000000 s hg38.chr19_GL949753v2_alt 623205 322 + 796479 TT-------ACAGGAGTGAggcccggcgcggtggctcacgcctgtaatcccagcactttgggaaaccgaggcaggtgggtcatgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctact-aaaaaaaaatacaaaaattatccgggcgtggtggcgggcgcctgtagtcccagctacacaagaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgagcgacagagtgagactccgtctcaaaaaaaaaaaaaaagaaaaagaaaa s panTro4.chr19 59831352 323 + 63644993 TGCTGAAAAAAAACAGTGAggcagggcatggtggctcacgcctgtaatcccagcactttgggaagccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacacagtgaaaccctgtctctactaaaaaaaaaatacaaaaattatccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagtgagactccgtctcaaaaaaaaa-------aaaaagaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e nomLeu3.chr10 103280971 807 - 106955855 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=311.000000 s hg38.chr19_GL949753v2_alt 623527 2 + 796479 ag s panTro4.chr19 59831675 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281778 2 - 106955855 AA i nomLeu3.chr10 I 807 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e macFas5.chr19 55696596 6 + 59248254 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 623529 1 + 796479 a s panTro4.chr19 59831677 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281780 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696602 1 + 59248254 A i macFas5.chr19 I 6 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e papAnu2.chr19 47809511 5 + 51301725 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 623530 1 + 796479 a s panTro4.chr19 59831678 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281781 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696603 1 + 59248254 A i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809516 1 + 51301725 a i papAnu2.chr19 I 5 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e calJac3.chr22 45873049 598 + 49145316 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=31170.000000 s hg38.chr19_GL949753v2_alt 623531 36 + 796479 AAAAAAATAGTGAGACTTTGAATTTCACTATGTGTG s panTro4.chr19 59831679 28 + 63644993 aaaaaaaTAGTGAGACTTTGGATTTCAC-------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103281782 36 - 106955855 AAAAAAATAGTGAGACTTTGAATTTGACTATGTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696604 28 + 59248254 AAAAAAATAGTGAGACTTTGAATTTGAC-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809517 28 + 51301725 aaaaaaatagtgagaCTTTGAATTTGAC-------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873647 28 + 49145316 AGAAAAACAGTGAGACTTTGAATTTGAC-------- i calJac3.chr22 I 598 C 0 e canFam3.chr1 19991395 703 - 122678785 I e ponAbe2.chr19 56743228 1366 + 60714840 I e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=3128.000000 s hg38.chr19_GL949753v2_alt 623567 3 + 796479 TAT s panTro4.chr19 59831707 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744594 3 + 60714840 TAT i ponAbe2.chr19 I 1366 C 0 s macFas5.chr19 55696632 3 + 59248254 TAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809545 3 + 51301725 TAC i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45873675 3 + 49145316 TAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e nomLeu3.chr10 103281818 0 - 106955855 C e chlSab2.chr6 47525189 817 + 50890351 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=145450.000000 s hg38.chr19_GL949753v2_alt 623570 78 + 796479 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc s panTro4.chr19 59831710 78 + 63644993 GTGTGAGGAGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTAAATAGAAG---ACCggctgggccgggtggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744597 81 + 60714840 GTGTGAGGAGAAAGAGGTAATGATGACTTAACGAGGAAAATGAGGCTTAAATAGAAGGACAGGggctgggctgggtggctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281818 73 - 106955855 -----AGGAGAAGGACCTAATGATGACTGAATGAGGAAAATGAGGCTTAAATAGAAG---ACGggctgggccgggtggctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696635 80 + 59248254 CTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGggctgggccgtgtggttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809548 80 + 51301725 ATGTGAGGGGAAAGAGGTAATGATGActtaatgaggaaaatgaggcttacACAGAAG-ACAGGGGCTGGGCCGTGTGATTc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526006 77 + 50890351 GTGTGAGGGGAAAGAGGTAATGATGACTTAATGAGGAAAATGAGGCTTACACAGAAG-ACAGGGGCTG---CGTgtggttc i chlSab2.chr6 I 817 C 0 s calJac3.chr22 45873678 76 + 49145316 GTGTGAGGAGA--GGAGTGATGCT--CTTAATGAGGAAAATGAGGCTTAGGTAGAAG-ACCTGggctgggcgtggtggctc i calJac3.chr22 C 0 I 3 e canFam3.chr1 19991395 703 - 122678785 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=107764.000000 s hg38.chr19_GL949753v2_alt 623648 62 + 796479 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc s panTro4.chr19 59831788 62 + 63644993 ccgcatgtaatcccagcactttggaaggcaggggcggctggatcacttgaggtcaggagttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744678 62 + 60714840 gcgcatgcgatctcagcactttggaaggcagaggcaggtggatcacttgaggtcaggagttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281891 62 - 106955855 ccgcatgtaatcccagcacttcggaaggcaggggcaggtggatcacttgagatcaggagttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55696715 62 + 59248254 ccgcgtgtaatcccagcactttggaaggcagaggtgggtggatcacttgagatcaggagatc i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47809628 62 + 51301725 ccgcgtgtaatcccagcactttggaaggcagaggcgggcggatcacttgaggtcaggagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526083 62 + 50890351 ccgcgtgtaatcccagcacttaggaaggcagaggcgggtggatcacttgaggtcaggagatc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I e rheMac3.chr19 60569562 1121 + 64156825 I a score=406279.000000 s hg38.chr19_GL949753v2_alt 623710 181 + 796479 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacatgagttgggtgtggtggcgcacgccagtaattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctCAGAGg s panTro4.chr19 59831850 181 + 63644993 aagaccagcctggccaacacagtgaaaccccatctctactaaaaatacaaacattagttgggtgtggtggcgcatgccagtaattacagctactgggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgtactccagcctcggAGg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744740 181 + 60714840 gagaccagcctggccaacacagtgaaaccctgtctctactaaaaatacaaacattagctgggcgtggtggtgcacgcctgtaattacaggtactcggggctgaagcaagaggattgcttgaacttgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctcggAGg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103281953 181 - 106955855 gagaccagcctggccaacacagtgaaaccccgtctctactaaaaatacaaacattagctgggcgtggtggcgcacgcccataattacagctactcggggctgaagcaagaggattgcttgaactcgggaggcggaggttgcagtgagctgagatcacaccactgcactccaacctcggAGg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570683 179 + 64156825 Aagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i rheMac3.chr19 I 1121 C 0 s macFas5.chr19 55697089 179 + 59248254 aagaccagcctggccaacgtggtgaaaccccatctctactaaacatacaaacattaggtaggcatggtggcacatgct-gtaattacagctactcggggctgaggcaagaggatcgctt-aattcgggaggctgaggttgcagtgagctgagatcgcaccactgcgctccagcctggAAGg i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47809690 179 + 51301725 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctacccagggctgaggcaagaggatcgctt-aactcgggaggctaaggttgcagtgagctgagatcgcaccactgcgctccagcctggaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526145 180 + 50890351 gagaccagcctggccaacacagtgaaaccccatctctactaaacatacaaacattaggtgggcgtggtggcacacgct-gtaattacagctactcggggctgaggcaagaggatcgcttaaactcggcaggctgaggttgcagcaagctgagatcgcaccactgcgctccggcctggAAGg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19991395 703 - 122678785 I e calJac3.chr22 45873754 3 + 49145316 I a score=451536.000000 s hg38.chr19_GL949753v2_alt 623891 198 + 796479 cctgtcatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccagaggctgGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAA-----------AA s panTro4.chr19 59832031 203 + 63644993 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgaggttgggagttcaagaccagcctggccaacatggc-aaaacccc-gtttctactaaaaatatgaaaaaaattacctgggtat-gtggtgtgtgcctgtagtcccagctactccagaggctgGAAC-----------------------------------------------------------------------------ACAGT-GAGACTCTATCTC-----AAAAAAAAAA------AAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56744921 264 + 60714840 cctgtaatcccagacctttgggagaccaaagccagcaggtcaTACCACTGCACTCCAGCCTCGGAGgcctgtaatcccagacctttgggaagccgaagccagcaggtcatctgaggtcgggagttcgagaccagcctggccaacatgcc-aaaacccc---ctctactaaaaatatgaaaaaaattagctgggtgt-gtggtgtgtgcctgtagtcccagctactccagagtctgGAAC-----------------------------------------------------------------------------AAAGCAAAGACTCTAGCTC-----AAAAAAAAC-----------AA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282134 209 - 106955855 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcgggcaggtcatctgaggtcaagagttcaagatcagcttggccaacatggc-aaaacccc-gtctctattaaaaatatgaaaaaaattacctgggtgt-gtggtgtgtgcatgtagtcccaggtactccggtggctgaaac-----------------------------------------------------------------------------aCAGC-GAGACTCTATCTC-----AAAAAAAAACTCGTCTCAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60570862 206 + 64156825 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctgGAAA-----------------------------------------------------------------------------AGAGC-GAGACTCTATCTC-----AAAAAAAAAAACAAACAAACAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697268 207 + 59248254 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccaaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggcaaaaacgcc-atctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC----aaaaaaaaaaaacaaacaaacaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47809869 210 + 51301725 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtCATCtcagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctactcgggaggctggaac-----------------------------------------------------------------------------agagc-cagactctatctcaaaaaaaaaaaaaaaacaaacaaacaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526325 205 + 50890351 cctgtaatcccagccctttgggag-------------------------------------------------------------------gccgaagcaggcaggtcatctgagattgggagttcgagaccagcctggc-----tggc-aaaacgcc-gtctctactaaaaatatgaaaaaaattagccaggtgtggtggcgtgtgcctgtagtcccagctattcgggaggctggaac-----------------------------------------------------------------------------agAGC-GAGACTCTATCTC-----AAAAAAAAAACCAAACAAACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45873757 282 + 49145316 cctgtaatccccgcgcttcggaag-------------------------------------------------------------------gtagaggcgggcacatcacttgaggtcgggagtttgagaccagcctggccaacacagg-gaaacccctgtctctactaaaaatac---aaaaattagctgggcatggtggtgcatgcctgtaattacagctactc--ggggctgaagcaggagaatcacttgaactcgggaggcagagattacagtgagctgagattgtgccattgcacaccagcctgggcgacaagagt-gaaactgtgtctc-----aaaaaaaaaaaagaa-aaagaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 19991395 703 - 122678785 I a score=1042435.000000 s hg38.chr19_GL949753v2_alt 624089 326 + 796479 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACAAGTGCTAGAATGGAATTCCTCGTCAGGTTCGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCCGCAGGGTGAGGTGGGACCTTGTAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATCATCAGCAGACACTTGGGGCACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA s panTro4.chr19 59832234 326 + 63644993 AAATAGAAGACATGACTGGTGCAAAGACACATGCTCACGAGTGCTAGACTGGAATTCCTCGCCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCCGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTGGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGGGAAGGAG-TGCTGGGGCGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCTTGGGACACCTACCTTTTAACCACAGAGATGGGACTCCAGAAAGGTAAGTAGACAGCTGGG-GCCATAGGCTCTGAAGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745185 326 + 60714840 AAATAGAAGACATAACTGGTGCAAAGACACATGCTCATGAGTGCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTGGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCATCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCGTTGGGATACCTACCTTTTAACCACAGAGACGGGACTCCAGAAAGGTAAGTAGACAGCTAGG-GCCATAGGCTCTGAAGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282343 326 - 106955855 AAATAGAAGACATGACTGGTGCAAAGACACAAGCTCATGAGTGCTAGACTGGAATTCATCTTCAGCTTTGTCCATCTGTGGACCCTTCCACTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGATGGGGTGGGACCTTGCAAAGCTGCAGAATGTCATGGGGTAGACCCAAGAGAAGGAG-TGCTGGGGTGGAGGAGGTCAAAACCGTCCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACCCCTGGGACACCTACCTTGTAACCACAGAGACGGGACTCCAGGAAGGTAAGTAGACAGCTGAG-ACCGTAGGCCCTGAAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571068 326 + 64156825 AAATAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697475 326 + 59248254 aaaTAGAAGACATGATTGGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCCGGTGTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACTTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGCGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGATGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCAGAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810079 326 + 51301725 aaatagaagacaTGATTTGTGCAAAGATACATGCTCATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCTGCTTTACCTGCTGGATGAAGCTCCCGGGACCTGCAGGGTAGAGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGACCCAAGGGAAGGAG-GGCGGGGGCGGAAGACGTCAacatcattctctttt-------cttcacttccCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAGCCACAGAGACGGGACTCCAGAAAGGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526530 326 + 50890351 AAATAGAAGACATGATTGGTGCAAAGATACATGCTTATGAGTTCTAGACTGGAATTCCTCCTCAGGTTTGTCCATCTGTGGACCCTTCCGCTTTACCTGCTGGATGAAGCTCCTGGGACCTGCAGGGTAGGGTAGGACCTTGCAAAGCTGCAGAACGTCATGGGGTGGATCCAAGGGAAGGAG-CATGGGGGCAGAAGACGTCAACATCATTCTCTTTT-------CTTCACTTCCCTTATTATCAGCAGACTCTTGGGACACCTGCCTTTTAACCACAGAGACGGGACTCCAGAAAAGTAAGTAGACACCTGGG-GCCATAGGCTCTGAAGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874039 316 + 49145316 aTGTAGAAGACGTGACCGTTGCAAAGACACACACTCATGAGTGCTAGAGTGGACTCCCTCCTCAGGCTTGTCCATCTGCGGACCCTTCCACTGTACCTGCTGGATGAAGCT-CTGGGACCTGCAGGGC-GGGTGGGACCT--------TGCAGAAGGTCATTGGGTATACCCAAGGGAAGGAG-CGCTGGGGTGGAGGAGGCCAACACCATCCCCTTTT-------CTTTACTTCCCTTATTGTTGGCAGACTCTGGGGACACCTACCTTTTATCCACAGAGACGGGGCTCCAGAAAGGTAAGTGGACACCTGGG-GCCGAGGGCTGTAAAGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992098 319 - 122678785 AGATGGAAGACACATCTGGCATGAGGCC---------------CTGGAGCTGAATTCCCCCTTGGGTTTGCCTGCCCTTTGGCTCCTGCTCTCTACCTGCCAGACGAAGCCACTAGGACCTGGAGGTGGGGTGGGGACCTGGAAAAGCTGCAGAAGGTCATGGGGTCCATCCAAGGGGAGGAGAGGCTCCCTCAGCAGAGACCAACACCATCTCTTTTTCTCCCTACTTCACTTCCC-TATCATCCGCAGAACCTTGGGACACCTACTTGTTAGCCACAGAAGCAGAATTCCAGCAAGGTAAGCAAGCAATGGAGTGCTGCACACTGTGAAGGAA i canFam3.chr1 I 703 I 37 a score=531260.000000 s hg38.chr19_GL949753v2_alt 624415 188 + 796479 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGGAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcaagaccagtctggccaacatggcgaaatcccatctctactaaaaatac s panTro4.chr19 59832560 188 + 63644993 GGGGCTGGGCATAGAGTA--GACCTAGGAAGGAAATCTAAAT---GGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtagctcacacctgtaatctcagccctttgggaggccaaggcgggcagatcatctgaggtcgggagttcgagaccagtctggccaacatggcgaaatcccatctctactaaaaatac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745511 196 + 60714840 GGAGCTGGGTATAGAGTA--GACCTAGGAAGGAGATCGGGATGGAGGGAACAAGAGGGTGTCCTTGGCCAggccaggcacagtggctcacacctataatctcagccctttgggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggtctgaccaacatggcgaaaccccatctctactaaaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282669 191 - 106955855 GGAGCTGGGCATAGAGTA--GACCTAGGAAGGAGATTGAGATGGAGGGAACAAGAGGGTGTCCTT-----ggccaggcacagtggctcacacctgtaatctcagccctccaggaggccgaggcgggcagatcatctgaggtcgggagttcgagaccggcctggccaacatggcgaaaccccatctctactaaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571394 193 + 64156825 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697801 193 + 59248254 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggcgcagtggctcacgcctgtaatcccagccctttgggaggccgaggcgggcagatcatctgaggtcaggagttcgagactggtctggccgatatggcgaaaccccatctctactaaaaatag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810405 192 + 51301725 GGAGCTGGGCATAGAGTAATGACCTGGGAAGGAGATCGGGATGAACGGAACAAGA-GGCgtcctt-----ggccaggcgcagtggcttacgcctgtcatcccagccctttgggaggccgaggcaggtagatcatctgaggtcaggagtttgagactggtctGGCcgatatggcgaaaccccatctctactaaaaatag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47526856 193 + 50890351 GGAGCTGGGCATAGAGTAATGACCTGGGAAAGAGATCGGGATGAACGGAACAAGAGGGTGTCCTT-----ggccaggtgcagtggctcacgcttgtaatcccagccctttgggaggccaaggcgggcagattatctgaggtcaggagttcgagactggtctggccaatatggcgaaaccccatctctactaaaaatag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874355 193 + 49145316 GGAGCTGGGTGGAGAGTCCCGAGCAGGGAAGGAGATGGGGATCAGTGAAACAGGAGGGTGTCCTT-----ggccaggtgcggtagcccacgcctgtaatcccagcacactgggaggccaaggcaggcggatcatctgaggtcaggagtttgagaccagcctggccaatgtggggaaaccccatctctagcaaaaatac i calJac3.chr22 C 0 I 299 e canFam3.chr1 19992417 37 - 122678785 I a score=418864.000000 s hg38.chr19_GL949753v2_alt 624603 195 + 796479 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcttgaacccaggaagtggaggttgcagtgagccg-agatcgtgccattgcactccagcctgggcgacaagactgaggctctgtct-caaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59832748 174 + 63644993 aaaaaaattagccaggcatggtggcgtgtgcctgtagtcccagctacttgggaggctgagacaggagaatagcctgaacccaggaagtggaggttgcagtgagccg-agatcgtaccattgcactccagcctgggcgacaagactgaggctctggct-c---------------------aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745707 183 + 60714840 aaaaaaattagccaggcgtggtggcgtgtgcctgtagtcccagctactcgggaggctgaggcaggagaatagcttgaacccaggaagtggaggtggcagtgagccg-agattatgccattgcactccagcctgggggacaagactgaggctctgttt-c------------aaaaaaaaaaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103282860 164 - 106955855 aaaaaaattagccgggcatggtggcgtgtgcctgt-----------------atgctgaggcaggagaatagcttgaaccca-gaagcggaggttgcagtgagccg-agattgtgccattgcactccagcctgggagacaagactgaggctctgtct-c-------------aaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571587 173 + 64156825 ggaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatagtgccactgtactccagcctgggcaacaagactgaggctccgtgtac-----------------------aaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55697994 171 + 59248254 gaaaaaattatccgggcatggtggtgcgtgtctgtagtcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctccgtgtac-------------------------aaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810597 171 + 51301725 aaaaaaattatccgggcatggtggtgcgtgcctgtagtcccagctacttgggtggttgaggcaggagaatcgcttgaacccgggaagtggaggttgcagtgagccg-agatcgcgccactgtactccagcctgggcaacaagactgaggctctgtgtac-------------------------aaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527049 170 + 50890351 aaaaaaattatccgggcatggtggtgcatgcctgtagtcccagctacttgggtggctgaggcaggagaatcacttgaacccgggaagtggaggttgcagtgagccg-agatcgtgccactgtactccagcctgggcaacaagactgaggctctgtgtac--------------------------gaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45874847 154 + 49145316 acaaaaattagccaggtgtggtggcgctcacctgaagtcccagctactcgggaggctgagacgagag-------------------gtggaggttgcagggagctgaagatcgcactgttgtactccagcctgggcaacaagatcaaggctctgtct-c-----------------------aaaaaagaataaaaC i calJac3.chr22 I 299 C 0 e canFam3.chr1 19992417 37 - 122678785 I a score=777057.000000 s hg38.chr19_GL949753v2_alt 624798 212 + 796479 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG s panTro4.chr19 59832922 212 + 63644993 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCTACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56745890 212 + 60714840 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTATGGTTCCTGGTTGAAGACTGGTTCAGCAGGAGGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i ponAbe2.chr19 C 0 M 1634 s nomLeu3.chr10 103283024 212 - 106955855 aGAGGGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTC---CTGCCCACAGACCATGCCCTCTGGGATCACACTGCCCAGAATTTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGGTTCCTGGTTGAAGACTGGCTCGGCAGGAAGAGGACTAGAGAGCGAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571760 212 + 64156825 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGG---ACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698165 215 + 59248254 aGAGGGTGTCCTTACATCCCTGTCAGCAATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTAGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810768 215 + 51301725 agagggtgtcCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGATTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACCTGGGAAGGCAGGAGAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527219 215 + 50890351 aGAGCGTGTCCTTACATCCCTGTCAGCGATCACCCTGTTCTCCTGCTGCCCACAGACCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTAGTGTGTCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACTAGAGAGCAAGCCAGCAGAGCTTCCACTTGGGAAGGCAGGAGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875001 212 + 49145316 AGAGGGTGTCCTTGGGTCCCTGTCAGCAATCACCCTGTTCTC---CTGCCCACAGAGCTTGCCCTCTGGGACCACACTGCCCAGAATCTCCTTCGGGTGGGCCTGGCCTTCCTGGTCCTGGTGGCTCTGGTGTGGCTCCTGGTTGAAGACTGGCTCAGCAGGAAGAGGACCAGAGGGCGAGCCAGCAGAACTTCCACTGGGCAATGCAGGAGAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992454 212 - 122678785 AGGTGGTGCCTGGCTATTCCTGTCAGTAATCAGTCTGTTCTT---CTCACCCCAGCCCCTGCCTTCTGGGATCACACTGCCCATAATATCCTTCAGATTGGTCTGGCTTTCCTGGTCCTGATGGCCCTCATGTGCCTCCTGGTTGATTACTGGCTTTGCAGGAAGAGGATACAAGAGCAAGCCAACAGGGCTTCACCTCAGGAATGCAGGAGAAG i canFam3.chr1 I 37 C 0 a score=255064.000000 s hg38.chr19_GL949753v2_alt 625010 111 + 796479 GCTG----AACACACAGACTCTTTGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCTCTGTGTTGGACCCACGGAG s panTro4.chr19 59833134 111 + 63644993 GCTG----AACACAAAGACTCTTTGAA-GAATGACCGTGAGACACAGTGGCCGTGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCCGCGTGAGCTCTGTGTTGGACCCACGGAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283236 109 - 106955855 GCCA----AATACAAAGACTC--TGAA-GAATGACCATGAGACACAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGCGGCGTGAGCGCTGTGTTGGACCCATGGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60571972 113 + 64156825 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698380 113 + 59248254 GTTGAACAAACACAAAGACTC--TGAA-GAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTCGGTGGCGTGAGCTCTGTGTCAGACCCACGGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47810983 115 + 51301725 GTTGAACAAACACAAAGACTCTTTGAA-AAATGACCATGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCGTGAGCTCTGTGTCAGACCCGTGgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527434 111 + 50890351 GTTG----AACACAAAGACTCTTTGAA-GAATGACCACGAGACGCAGTGGCCATGGGTGGAACTGAAAGCTGGTGTTGAGCCTGGGTGGCATGAGCTCTGTGTCAGACCCACGGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875213 95 + 49145316 CTTG----AACACAAAGACTCTCTGAA-GAACGCCCGAGAGATGCGGCAGCCGTGGGTGGAACTGAAAGCCGGTGTTGAGC----------------CTGTGTTGAACCCACAGAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 19992666 112 - 122678785 GTTCAG--AACACAGAGAACCCCTGGACAAATGACCAAGAGATGTGCTGGCCACAGTTAGAGCTGAACACTGGCATTGACCTTGGGCTGTGTGAG--CTGTGTTGCACCCATGGAG i canFam3.chr1 C 0 I 4 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=1158352.000000 s hg38.chr19_GL949753v2_alt 625121 530 + 796479 GAGGGAGTCACTGCAGGGA-------AAGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc----------tttt----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctagctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgtt-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTACCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGATGGCCATG s panTro4.chr19 59833245 527 + 63644993 GAGGGAGTCACTGCAGGGA-------ACGAGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttc-------------t----tttttttttttgagacagagtttt-ctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctcgggttcaagtgattctcctgcctcagcctcctgagtagctggaattacaggcatgcgccaccac-cccagctaa--ttttgtatttttagtggagacggggtttctccctgct-----ggctggtctcgaactcctgacctcaagtgat-ctccccgccttggcctcccaaagggctgggattacaggcataagccgctgcgcccagccACTGAATTTCTTCTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATCTCTCCTTCTTTAACAGGAGGGCCATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283345 540 - 106955855 GAGGGAGTCACTGCAGGGA-------ACAAGGGACACTGGCATGCCATTTGTCAGAGCTTCCCAGACAATGCAGAGGGTGGGAGAACTACATGCTAAAtttcttgttt-ttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctacctctccatccctggggttcaagcgattctcctgactcagccccccgagtagctgggataacaggcatgcgccaccac-ctcggctaa--ttttgtatttttagcagagacggggtttctccctgtt-----ggctgttctcgaactcctgacctcaagtgat-ctccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgtgcagccACTGAATTTCTTCTGTAGACACATCCTACAGTCTCTTCTAGGCTCTAACTATTTTTGTGCCACTTACGGCAAACCATACTTTTAAGCACTCTGTTCTTTTCTGAAAAGCTCTCTCCTTCTTTAACAGGATGGCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572085 554 + 64156825 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----tttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccacgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55698493 554 + 59248254 GAGGGAGTCACTGCAGGGAACAGGGGACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGCTAAGtttctttctggttttttt----gttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggctggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTACTTTTGTGCCACTTACTGCAAACCATACTTTTAAGCACTCTGGTCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGGCCATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811098 551 + 51301725 gaggaagtcactgcagggA-------ACAGGGGACACTGGCATTCCATTTGTCAGAGCATCCCGGACGACGCAGAGGGTGGGAGAACTACATGctaaatttctttctggttttttttttctttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggcatgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacggggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagat-ccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgccCGGCCGCTGAATTTCTTTTGTGGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGGCTTTTCTGAAAAGATCTCTTCTTCTTTAACAGGATGgccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47527545 532 + 50890351 GAGGGAGTCACTGCAGGGA-------ACAGGGGACACTGGCATTCCGTTTGTCAGAGCATCCTGGACGATGCAGAGGGTGGGAGAACTACATGCTAAAtttctgtttg------------tttttttttttgagacagagttttgctcttgttgcccaggctggagtgca-----gtgattttggctcactgcaacctctacctctccatcccttgggctcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaa--ttttgtatttttagtagagacgaggtttctccctgttggtcaggttggtcttgaactcctgatctcaagagatcccccccgcctcggcctcccaaagggctgggattacaggcatgagctgccgcgcccagccGCTGAATTTCTTTTGTAGACAAGTCCTATGGTCTCTTCTAGGTTCTAAGTATTTTTGTGCCACTTACTGCAAACCATACTTTTAACCACTCTGGTCTTTTCTGAAAAGATC---TCTTCTTTAACAGGATGGCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875308 524 + 49145316 GAGGGAGTCACTGCAGGAA-------ACAAGGGACAATGCCATTCCATTTGTCAGACCATCCCAGATGACACAGGAGGTGGGAGAA--ACAAGCTAAATTTCTTCGTA------------Atttttttcctgaggcagagtctggctc-tgtcatccaggctggagtgcagtggcgctatctcagctcactgaaacctccgcctccc--------aggttcgagtgattctcctgcctcagcctcctgagtagctgggattacatgtacgcaccaccacacctagctaattttttgtatttttaatagagacggggtttcaccgcactagccaggatggtctcgatctcccgacctca--tgat-----ccgcctcggcctcacaaagtgctgggattacaggcgtgagccaccacccctggccACTAAATTTCTTTTGTAGACAAATCCTATGGTCTCTTCTAGGCTCTAAGTATGTTTGTGCAACTTACTGCAAACCATACTTTTAACAGCTCTAGTCTTTTCTGAAAAGACCTCTCCTTCTCTAATAGAACGGCCTTG i calJac3.chr22 C 0 C 0 e canFam3.chr1 19992778 4 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=170769.000000 s hg38.chr19_GL949753v2_alt 625651 75 + 796479 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC s panTro4.chr19 59833772 75 + 63644993 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATAACC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283885 76 - 106955855 GAAATA--TTTTTTTCCTACTTTGGTCTT---------TTTTTCTTTCCTTTCTCTGCAGGGAAGCCATTCAAAATAGTTAATAACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572639 73 + 64156825 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699047 73 + 59248254 GAAATATTTTTTTTTTCTACTTTGGTC-------------TTTCTTCCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811649 73 + 51301725 gaaatattttttttttctactttggtc-------------tttcttccctttctctgca-ggAAGCCATTCAAAATAGTTAATGACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528077 72 + 50890351 GAAATA-TTTTTTTTTCTACTTTGGTC-------------TTTCTTTCCTTTCTCTGCA-GGAAGCCATTCAAAATAGTTAATGACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45875832 75 + 49145316 GAAATA--TTTTCTTCCTACTCTGGGCCT---------TATTTCTTCCCTTTCTCTGCA-GGGAAGCATTCaaaatagttaataacc i calJac3.chr22 C 0 I 160 s canFam3.chr1 19992782 83 - 122678785 GGAACA--TTTCCTTCCTAGTTTGGTCTTTGTCTCTAGTTCTTCTTTCCTTT-GCTGCA-ATATATCATTCAAGATATTTAACAACT i canFam3.chr1 I 4 C 0 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=103809.000000 s hg38.chr19_GL949753v2_alt 625726 38 + 796479 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA s panTro4.chr19 59833847 38 + 63644993 AATATAGAATAGGTCTGTATCAAATGGTTCAGGAGGCA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283961 38 - 106955855 AATATAGAATAGGTCTATACCAAATGGTTCAGGAGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572712 38 + 64156825 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699120 38 + 59248254 AATATAGAATAGGTTTGTATCGAATGGTTCAGGAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811722 38 + 51301725 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528149 38 + 50890351 AATATAGAATAGGTCTGTATCGAATGGTTCAGGAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876067 38 + 49145316 AATATAGAATAGGTCTGAATCAAATGGTTCAGGAGGCA i calJac3.chr22 I 160 C 0 s canFam3.chr1 19992865 38 - 122678785 AGTACAGAATAGGCATTTATCAAGGGGAACATGAGCCA i canFam3.chr1 C 0 I 79 e ponAbe2.chr19 56746102 1634 + 60714840 M a score=437001.000000 s hg38.chr19_GL949753v2_alt 625764 199 + 796479 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaaCTCggccaggcacggtggct s panTro4.chr19 59833885 199 + 63644993 TTGTGGCAACAACCAGTTGTAGAGAAGCAGCTTTATAAGTGAATCCTgccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattCggccaggcacggtggct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103283999 192 - 106955855 TTGTGGCAACAACCAGTCATAGAGAAGCACC-------GTGAATCCTgccgggcacggtggctcacacctgtaatcccaacactttgggaggctaaggcaggcagatcacctgaggtcaggagttcgagaccagccttgccaacacaattaaaccccatctctactaaaaatacaataattCAgccaggcacggtggct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572750 198 + 64156825 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtaaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699158 198 + 59248254 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811760 198 + 51301725 TTGTGGCAACAGCCAGTCATAGAGAAGCAGCTTTATAAGTGAATCCTGCCGGGGGCGGTGgcttatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtgtggtggtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528187 198 + 50890351 TTGTGGCAACAACCAGTCGTAGAGAAATAGCTTTGTAAGTGAATCCTgccgggggcggtggctcatgcccataatcccaacactttgggagactgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacacgatgaacccttatctctactaaaaatacaaaaatt-agccaggtatggtggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45876105 199 + 49145316 TCGCGGCCACAACCAGTCACAGAGAAGCAGCTTTGTAAGTGAATCCTgctgggcgcggtgactcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattcagcccgacacagtggTT i calJac3.chr22 C 0 I 2755 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M a score=31152.000000 s hg38.chr19_GL949753v2_alt 625963 17 + 796479 catgcctgtaatcccag s panTro4.chr19 59834084 17 + 63644993 catgcctgtaatcccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284191 17 - 106955855 catgcctgtaatcccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572948 17 + 64156825 tgtgcctgtaatcccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55699356 17 + 59248254 tgtgcctgtaatcccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811958 17 + 51301725 tgtgcctgtaatcccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528385 17 + 50890351 tgtgcctgtaatcccag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=430.000000 s hg38.chr19_GL949753v2_alt 625980 1 + 796479 c s panTro4.chr19 59834101 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284208 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60572965 1 + 64156825 c i rheMac3.chr19 C 0 I 422 s macFas5.chr19 55699373 1 + 59248254 c i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811975 1 + 51301725 c i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C a score=51456.000000 s hg38.chr19_GL949753v2_alt 625981 134 + 796479 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggccaacatggtgaaaccacatctc-------------tactaaaaatataaaaattagccaggtatg--gtggcgtgtgcttgtaatcccag s panTro4.chr19 59834102 106 + 63644993 actttgggaggccaaggtgggaggatcacctgaggtcaggagttcgaga-------------------------------gcagcctggtcaacatggtgaaaccacatctc-------------tactaaaaatacaaaaattag------------------------------ccag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284209 133 - 106955855 actttgggaggccaaggcgggaggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacacaatgaaaccccatctc-------------tactaaaaatacaacaattagccaggtatg--gtggcgtgtgcttgtgtc-ccag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699374 180 + 59248254 tacttaggaggctgaggcaggagaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgcaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaataaaaatacaaatacaaaaattagccaggcatgatgtgggacttgtctgtgatctcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47811976 177 + 51301725 tacttgggaggctgaggc---agaatagcttgaacccgcgaggcagaggctgcagtgagccaagatcgtaccactgcactccagcctgggtgatagagcaagactctgtctcaaaaaataaatacaaatacaaatacaaaaattagccaggcatgatgtgggacatgtctgtgatcccag i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528402 0 + 50890351 C e rheMac3.chr19 60572966 422 + 64156825 I a score=53428.000000 s hg38.chr19_GL949753v2_alt 626115 49 + 796479 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag s panTro4.chr19 59834208 49 + 63644993 ctactcaggaggctgaggcaggagaatagcttgaacccgggaggcggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284342 47 - 106955855 ctact-aggaggctgaggcaggagaatagcttgaacccaggaggcaga- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699554 49 + 59248254 ctactcaggaggctgaggcaggagaatcacttaaacccagaaagcagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812153 49 + 51301725 ctactcaggaggctgaggcaggagaatcacttgaacccagaaagcagat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528402 49 + 50890351 ctactcgtgagactgaggcaggagaatcacttgaacccagaaagcagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60572966 422 + 64156825 I a score=204147.000000 s hg38.chr19_GL949753v2_alt 626164 133 + 796479 gctgcagggagccaagatcgcaccactgcactccagcctacgtgacagagcaagattctgtctcaaaaaaaaaaagaaaaaaaaaa---aata--aGTGACTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA s panTro4.chr19 59834257 129 + 63644993 gctgcagggagccaagatcgcaccactgcactccagcctatgtgacagagcaagattctgtctcaaaaaagaaaag----aaaaaa---aata--aaTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCCTTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284389 129 - 106955855 gctgcagggagccaagatcgcaccactgcactccaacctgggtgacagagcaagactctgtctcaaaaaaaagaaa----ataaaa---aaaa--aGTGAGTCCTGGCTGCATCCCAACCATACCCCAATTCTTCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60573388 129 + 64156825 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaataaa----agaaaa---aataataaTGAGTCCTGGCTACATCCCAACCACGCCCCAATTCCTCCTA i rheMac3.chr19 I 422 I 1283 s macFas5.chr19 55699603 129 + 59248254 gctgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataaTGAGTCCTGGCTGCATCCCAACGACGCCCCAATTTCTCCTA i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47812202 129 + 51301725 gctgcagtgagccgagatcacaccactgcactccagcctgggtgatagagcaaga--ctgtctcaaaaaaaagaaa----agaaaa---aataataatgagtcCTGGCTGCATCCCAACGACGCCCCAATTCCTCCTA i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47528451 134 + 50890351 actgcagtgagccgagatcacaccactgcactccatcctgggtgatagagcaagactctgtctcaaaaaaaagaaa----gaaaaaaGTAATAATAATGAGTCCTGGCTGCATCCCAACCACGCCCCAATTCCTCCTA i chlSab2.chr6 C 0 I 56 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I a score=33908.000000 s hg38.chr19_GL949753v2_alt 626297 70 + 796479 ACCACAGAATTATTCCATCTTCTCTTCCtttttttt---------ttttttctttttttttgtttgttttgttGGGACA s panTro4.chr19 59834386 79 + 63644993 ACCACAGAATTATTCCATCTTCTCTTCCttttttttttttttttcttttttttttttttttgtttattttGTTGGGACA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284518 57 - 106955855 ACCACAGA---ATTCCATCTTCTCTTCCtttttttt-------------------ttttttgtttgttttgttGGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699741 57 + 59248254 ACCACAGA---ATTCCATCTTCTTtttgttttttgt-------------------ttttgtttttgttttgttgggacg i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47812340 49 + 51301725 ACCACAGA---ATTccatcttc--------ttttgt-------------------ttttgtttttgttttgttgggacG i papAnu2.chr19 I 9 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=40217.000000 s hg38.chr19_GL949753v2_alt 626367 155 + 796479 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatcccttccccc s panTro4.chr19 59834465 155 + 63644993 GAATTTCACtttttttttttttaatgtaagttttagggtacatgtgcacaacgtgcaggttagttacatatgtatacatgtgccatgttggtgtgctgcacccactaactcgtcatttaacattaggtatatctcctaatgctatccctcccccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284575 154 - 106955855 GAATTTCAC-ttttttttttttaacataagttttagggtacatgtgcacaacgtacaggttagttacataagtatatatgtgccatgttggtgtgctgcacccactaactcctcatttaacattaggtgtatcttctaatgctatccctcccccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e chlSab2.chr6 47528585 56 + 50890351 I e papAnu2.chr19 47812389 0 + 51301725 C e macFas5.chr19 55699798 0 + 59248254 C e rheMac3.chr19 60573517 1283 + 64156825 I a score=147890.000000 s hg38.chr19_GL949753v2_alt 626522 118 + 796479 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat s panTro4.chr19 59834620 118 + 63644993 gagtttcacttttgtcacccaggctggaatgcagtggtgcaatcttggctcactgccacctccacctccagggttcaaatgattctcctgcctcagcctcctgaatagctgggattat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103284729 118 - 106955855 gagtttcacttttgtcactcagggtggaatgcagtggtgcagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699798 118 + 59248254 gaggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812389 118 + 51301725 GAggttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagcgattctcctgcctcagcctcctgaatagctgggactac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528641 118 + 50890351 gagtttcactgttgttgcccaggatggagtgcagtggcgcgatctcagctcactgccacctccacctccagggttcaagggattcgcctgcctcagcctcctgaatagctgggactac i chlSab2.chr6 I 56 C 0 e canFam3.chr1 19992903 79 - 122678785 I e ponAbe2.chr19 56746102 1634 + 60714840 M e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=992123.000000 s hg38.chr19_GL949753v2_alt 626640 599 + 796479 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaagatagcac--------ttttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcgcgcgccaccacacccggttaa-ttttttttgcatctttagtagaggtagggtttcatcatgttgccctgggtggtctcaaactcctgagttcaggtgatccccccgccttggcctctcaaagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa s panTro4.chr19 59834738 607 + 63644993 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgtgagtcaccgtacccggccACCATCTTTGCTTCTTTATCCACACCTTGCcttgttcttcagggctctgcagagatatcatttcctcca--ag---------agtttccacaactccgactt--cacaaaggtagcacttttttttttttttttt---------tttttttgagac--agtctcactctgtagcccaagctggcgtgcagtggcacaatctcagctcactgcaaccttcgcctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgtgccaccacacccggttaa-ttttttttgcatctttagtagagatagggtttcgtcgtgttgccctgggtggtctcaaactcctgagttctggtgatccccccgccttggcctctcagagtgctaggattacaggcgtgagccactgcgcccagccaagacaacactttcctcatcccaaagcacctgttaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56747736 601 + 60714840 aggcatgcaccaccatgcccagctgatttttgtatttttagtagaaatgggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcagcctcccaaagtgctgggattacaggtgtgagtcaccgcgcccggACACCAtcttcgcttctttatccataccttgccttgttcttcagggctctgcagagatatcatttcctccaagag---------agtttccacaactccaactt--cacaaaaatagctc-------tttttttttt---------tttttttgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcacctctggggctcaagcgattctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttcatttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccaccttggcctcccaaagtgctgggatcacaggcgtgagccactgc-----gccaagacaacacttttctcatcccaaagcacctgttaa i ponAbe2.chr19 M 1634 C 0 s nomLeu3.chr10 103284847 600 - 106955855 aggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggccACCAtcttctcctctttatccgcaccttgccttgttcttcagggctctgcagaggtatcatttcctccaagag---------agcttccacagctctgactt--cacgaagacagcac-----------gttttt---------tttttctgagacagagtctcactctgtagcccaagctggagtgcagtggcgcaatctcagctcactgcaaccttcgcctctggggctccagcgactctccttcctcagcctcccaagtagctgggactagaggcacgcgccaccacacccggttaa-ttttttttgcatttttagtagagatggggtttcatcatgttgccctgggtggtctcaaactcctgagctcaggtgatccccccgccttggcctcctaacgtgctgggattacaggcatgagccaccaggcctggccaagacaacacttttctcatcccagagcacctgttaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55699916 601 + 59248254 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgctggaattacaggtgggagccaccacgcctggccACCGTTCTCTCTTCTTTATCCATACCTTGCCTTGTTCTTCAGGGCTCTGCGTAGGTACCATTTCCTCCAAGAG--------TTATGGAAATAACTCTGACTTCACACAAAGACAGCAC---------tttttttt-----gttgtttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcagtctcagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccacacc--gttaa-ttttttgtgtgtttttagaagagatggggtt---tcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttgacctcccaaagtgctgggattacaggtgtgagccaccatgcctggccAAG---ACACTTTTCTCATCCCAAAGCACCTGCTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47812507 601 + 51301725 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcacgttggccaggctggtctcgaactcctgacttcaggtgatccaccagcgtcggcctcccaaagtgctggaattacaggtgtgagccaccacgcctggccaccgTTCTCTCTTCTTTATCCATACTTTGCCTTGTTCTTCAGGGCTCTGCGTAGATACCATTTCCTCCAAGAG---------AGTTTCCATAACTCTGACTTCACACAAAGAcagcac---------ttttttgt---------tttttttgagacggagtctcactgtgtagcccaagctggagtgcagtggttcaatcttagctcactgcaaccttcgcctctggggctcaagcgattctctttgctcagcctcccaagtagctgggactagaggcacgcgccaccatacccagttaa-ttttttgtgtgtttttagaagagatggggtttcatcatgttgccctgggtggtcttgaactcctgagctcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccaag---acacTTTTCTCATCCCAAAGCACCTGCTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47528759 619 + 50890351 aggcatgcaccaccacgcctggttaatttttgtatttttagtagaaat-ggggtttcgtcatgttggccaggctggtcttgaactcctgacttcaggtgatccaccagcctcggcctcccaaagtgcgggaattacaggtgtgagccaccgcgcctggccACCGTTCTCTCTCCTTTATCCATACCTTGCCCTGTTCTTCAGGGCTCTGCATAGATACCATTTCCTCCAAGGGAGATACCATTTCCTCCATAACTCTGACTTCACACAAAGACAGCAC---------ttttttttgttttgttttttttttgagacagagtctcactgtgtagcccaagctggagtgcagtggttcaatctcagctcactgcaaccttcgcctctggggctcaagcgattctctttcctcagcctcccaagtagctgggactagaggcacgcgccaccacactcagttaa-ttttttgtgtgtttttagaagagattgggtttcatcatgttgccctgggtggtcttgaactcctgaggtcaggtgatcgccctgccttggcctcccaaagtgctgggattacaggtgtaagccaccatgcctggccAAG---ACACTTTCCTCATCCCAGAGCACCTGCTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19992903 79 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=375173.000000 s hg38.chr19_GL949753v2_alt 627239 185 + 796479 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataacggggttctcgggaaatatatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC s panTro4.chr19 59835345 185 + 63644993 ttccctgtaacagcacttgaaccctgattcggcatgcatgtccattttcctgcctctaccgtgaactcgtgtgaattga-tctatgtcagatttagtggctgcattcacagctcccgcaactataatggggttctcgggaaatatatatcaaattagtgaatGTATATAC-GGGGCTGTGGCACAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748337 185 + 60714840 ttccctgtaacagcacttgaaccctgatttggcatgcacgtccatcttcctgcctgtactgtgagctcctgtgacttga-tctatgtcagatttagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatatatatcaaatgagtgaatGTATATAT-GGGGCTGTGGCACAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285447 181 - 106955855 ttccctgtaacagcacttgaaccctgattcg----gcacatccattttcctgcctctactgtgaactcgtgtgaattga-tctatgtcagatctagtggctgcgttcacagctcccgcaactataacagggttctcgggaaatacatatcaaatgagtgaatGTATATAC-GGGGCTGTGGCACAGC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700517 186 + 59248254 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACGCGTGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813108 186 + 51301725 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCTCCGCCGTGAACTCGTGTGAACTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCCGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529378 186 + 50890351 TTCCTTGTAACAGCACCTGAACCCTGATTCGGCATGCATGTCCATTTTCCTGTCCCCGCTGTGAACTCATGTGAATTGA-TCTATGTCAGATTTAGTGGCTGCGTTCACAGCTCTGGCAACTCTAAAGGGGTTCTCAGGAAATATATGTCAAATGAAGGAATGTATATACGGGGGCTGTGGCACAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19992982 184 - 122678785 TCCCCTATAACAGCACAGGGGCTCTAACACTGCATACATATCCATTTTCCTGACTCTACAGTGAACTTGTGTGAATTTAGCCCATGTGGTGTCTGGTGGCTGTGCTCACAGCTCTTGCCAC--TAAGAAAGTCCCCCAGAAATATACGTCAGGTCAATGAGTATATAAAT-GAGGCTGTAGCACAGC i canFam3.chr1 I 79 I 150 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=370166.000000 s hg38.chr19_GL949753v2_alt 627424 192 + 796479 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag s panTro4.chr19 59835530 189 + 63644993 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAA---CTACT-TATCAACCCATTTATATACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCATTAAATAGcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748522 192 + 60714840 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGTCTTGAAATGCTGTCTGGACACCACCACCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATATACTCATTGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285628 177 - 106955855 CTGCA---------------------------------------ACT-------------TATGGGTCTTGAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTATGTACTCATCGCATGGGTCCTCACGCCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAA--CTGATTTTTCTGTTAAATatcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700703 191 + 59248254 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCATTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813294 191 + 51301725 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCGCTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCACCACATGGG-CCCCACACCCTCCCGTTATTCTGGTGCCTCATGCCGGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATATCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47529564 191 + 50890351 CTGCA---------------------------------------ACTTGAGACTTCTCACTAGGGGCCTTTAAATGCTGTCTGGACACCACCATCACTTTCCTCCCTGAGAACTTCTACT-TATCAACCCATTTACATACTCATCACATGGG-CCCCACACCCTCCCACTATTCTGGTGCCTCATGCCAGTCAAATTTATTCTCTAAATCTGATTTTTCCGTTAAATatcaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 19993316 223 - 122678785 ctgcaggcagacactcaaccactgagccatccaggtgccccAGCACCTGAGACTCCTGATTATGGTCCTTAAAATGCTGTCTGGACC---------CTTTGTTCCTTACAAATTTTTATTCTATCAACCCATTAATATAACCATTATAGGGGTCCCTTCCCCCCACCAGTAATCTGACACCCCACATGGCTGAAACCCATTCTTTAAATCTGAGCTTTATGTTATATATCAG i canFam3.chr1 I 150 I 8686 e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=345796.000000 s hg38.chr19_GL949753v2_alt 627616 204 + 796479 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcagcagaatcacttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat s panTro4.chr19 59835719 204 + 63644993 cctggccaacacggtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggcttgcacccgtaatctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtaagccgagattgcaccactgcactccagcctggtaacagagcgagactccctctcaaaataaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748714 204 + 60714840 cctggccaacacggtaaaaccccatctctactaaaaagtacaaaatattagccaggcgcagtggctcgcacccctaatctcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgtggtgagccgagattgcgccactgcactccagcctggtaacagagtgagactccgtctcaaaataaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103285805 204 - 106955855 cctggccaacacagtaaaaccccatctctactaaaaaatacaaaatattagccaggcgcagtggctcgcacccgtaatctcagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagggggggtggtgagccgagattgcgccactgcactccagcctggtaacagagcgagactccgtctcaaaataaat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55700894 202 + 59248254 cctgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccgtaatctcagctactcgggaggctgaggcagaagaatcgcttgaacctgggaggtggaggttgcagtgagccgagctcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47813485 202 + 51301725 CCtgg-caacacgatgaaaccccgtctctactaaaaa-tacaacatattagccaggcgcagtgtctcgcacccgtaatctcagctactcgggatgctgaggcagaagaatcgcttgaacctgggagttggaggttgtggtgagccgagatcacgccactgcactccagcctggtaacagagcgagactccatctctaaataaat i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47529755 202 + 50890351 cctgg-caacacaatgaaaccccgtctctactaaaaa-tacaacatattagccgggcgcagtgtctcgcacccataatctcagcaactaaggaggctgaggcaggagaaccgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagcctggtaacagagcgagactccgtctctaaataaac i chlSab2.chr6 C 0 I 4 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I e rheMac3.chr19 60573517 1283 + 64156825 I a score=344433.000000 s hg38.chr19_GL949753v2_alt 627820 142 + 796479 aaaCTGCTGACTCGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcctagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaaaatcgtgcc s panTro4.chr19 59835923 142 + 63644993 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcggtgagccaagatcgtgcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56748918 142 + 60714840 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCCAACTCATTCCTTATATGTAAgcacctgtaatcccagctactcacaagggtgaggcaggagaatggcttgaacctgggaggcggaggttgcggtgagccgagatcgtgcc i ponAbe2.chr19 C 0 I 2137 s nomLeu3.chr10 103286009 142 - 106955855 aaaCTGCTGACTTGCGTATTTTTTCTTTACCCTAACTCATTCCTTACATGTAGgcacctgtaatcccagctactcagaaggctgacgcaggagaatcgcttgaagctgggaggcggaggttgcggtgagccgagatcgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60574800 142 + 64156825 AAACTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcggtgagctgagatcgcacc i rheMac3.chr19 I 1283 C 0 s macFas5.chr19 55701112 142 + 59248254 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggtcgcagtgagctgagatcgcgcc i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47813703 142 + 51301725 aaactgctgacttgcatattttttctttacccCAACTCATTCCTTACATGTagacacctgtcatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagctgagatcgcgcc i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47529961 142 + 50890351 aaaCTGCTGACTTGCATATTTTTTCTTTACCCCAACTCATTCCTTACATGTAGAcacctgtcatcccagctactcagaaggctgaggcaggagaatcacttgcacctgggaggcggaggtcgcagtaagctgagatcgcgcc i chlSab2.chr6 I 4 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45876304 2755 + 49145316 I a score=264156.000000 s hg38.chr19_GL949753v2_alt 627962 172 + 796479 actgcactccagcctgggcgacagagcgagactccatctc--aaaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA s panTro4.chr19 59836065 171 + 63644993 actgcactccagcctgggcgacagagcgagactccatctc---aaaaaaaaaaaaaaaaaaCCACATAGGCTCAGTCTTTTCAGTATCTGCTTTACTGGTTCAGTAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------TGAATGTTATTGAACTGTATTTTGTTCACTTTATTGTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103286151 174 - 106955855 actgcactccagcctgggcgacagagcgagactccatctcgaaaacaaaacaaaaaaaaaaCCACATAGGCTCAATCTTTTCAGTATCTGCTTTACTGGTTCAGCAAAAGCCAGGAAACATGACTTTGTGGTAATC------------------------------CGAATGCTATTCAACTGTATTTTATTTACTTTATTGTA i nomLeu3.chr10 C 0 I 898 s rheMac3.chr19 60574942 163 + 64156825 acagcactccagcct-ggtgacaaagcgagactccatctc--------aaaaaaaaaaaaa--GTGTAGGCTCAATCTTTTCAGTATTTGTTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55701254 165 + 59248254 actgcactccggcct-ggtgacaaagcgagactccatctc------aaaaaaaaaaaaaaa--GTGTAGGCTGAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47813845 168 + 51301725 actgcactccggcct-ggtgacaaagtgagactccatctc---aaaaaaaaaaaaaaaaaa--gtgtaggctCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATC------------------------------CGAGTGTTATTCAACTGTATATGGTTTACTTTATTGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530103 195 + 50890351 actgcactccggcct-ggtgacaaagcgagactctatctc------aaaaaaaaaaaaaaa--GTATAGGCTCAATCTTTTCAGTATTTGCTTTACTGGTTCAGCAAAAGCCAGGAAACACAACTTTGTGGTAATTGTGTTTTTCAACCGTGAGTGTTGTAAGTGGTAAGTGTTATTCAACTGTATATTGTTTACTTTATTGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I a score=363439.000000 s hg38.chr19_GL949753v2_alt 628134 342 + 796479 AATACTAGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaagaaaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcgcagaggtccgcctgctctcccctctccaagagtgtaatcctatgcttaataaacttatgccgctttgctatgtgtgtgtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagctttggctggtaac--GGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccat-atatcagacccccagaactaactcatcttataactgaata-----ttgt s panTro4.chr19 59836236 344 + 63644993 AATACTGGTGAACAGTG---AATAAATGGTTGTATATTCCTAATaag-aaaaaa-aaaaaaaagacccaaagtacagcgagctgatgccgatctcatttcacagaggtccgcctgctctcccctctccaagagtgtaatcctatgcttaataaacttatgccgctttgctatatgtgagtatcacacccaattctttgttcgaaacaccaagggcctggaacttcacagcttcagctggtaacaGGGGGAGCAGGGGTAAAGACATTTAAAAGCTGCT--TGtgttaaccataatcgccatcccgt-atatcagacccccagaaccaactcatcttataactgaata----cttgt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575105 332 + 64156825 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------GAAAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacaacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGggtaaggacatttaaaacctgct--cgtgttaaccataatcgtcatcgtgtaacattggatccccagaagtaactcatcttataactgaatactgt----- i rheMac3.chr19 C 0 I 36 s macFas5.chr19 55701419 327 + 59248254 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG------G-AAAaaaaagacccgaagtacagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctcc--gagtgtaatcctgtgcttaataaactgctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacaccttcagctggtaa---------caGGGGTAAGGACATTTAAAACCTGCT--CGtgttaaccataatcgtcatcatgtaacattggatccccagaagtaactcatcttataactgaata--------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814013 323 + 51301725 AATACTGGTGAACA-TGGTCAATAAATGGTTGTATATCcctaattag------g-aaaaaaaagaccCGAAGTACAGCAAACTGACGCCGATCTCATTTTGCAGAGGTCCGCCTGCTCTCCCCTCTCC--GAGTGTAATCCTGTGCTTAATAAA---CTTCTGCTTTGCTAGGTGTGTGTATCACGACCCATGCTTTGTTCACACCACCAAGGACCCAGGACTTCACACCTTCAGCTGGTAA---------CAGGGGTAAGGACATTTAAAACCTGCT--TGTGTTAACCATAATCGCCATCGTGTAACATTGGATCGCCAGAAGTAACTCATCTTATaactgaata--------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530298 339 + 50890351 AATACTGGTGAACAGTGGTCAATAAATGGTTGTATATCCCTAATTAG--------AAAaaaaagacccgaagtatagcaaactgacgccgatctcattttgcagaggtccacctgctctcccctctctgagagtgtaatcctgtgcttaataaacttctgctgctttgctaggtgtgtgtatcacgacccatgctttgttcacaccaccaaggacccaggacttcacagcttcagctggtaacaGGGGAAGCAGGGGTAAGGACATTTAAAACCTGCTTGTGtgttaaccgtaatcgccattgtgtaacattgggtccccagaagtaactcatcttataactgaata--------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=377.000000 s hg38.chr19_GL949753v2_alt 628476 9 + 796479 gc--ttttttt s panTro4.chr19 59836580 11 + 63644993 gcttttttttt i panTro4.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e chlSab2.chr6 47530637 0 + 50890351 C e papAnu2.chr19 47814336 0 + 51301725 C e macFas5.chr19 55701746 0 + 59248254 C e rheMac3.chr19 60575437 36 + 64156825 I a score=341851.000000 s hg38.chr19_GL949753v2_alt 628485 285 + 796479 ttttttttttttttgagacgaagtcct--gctctgtcacccaggctggagtgcagtggcgcgatcttgact--ctgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccaccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaactcctggtctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct s panTro4.chr19 59836591 287 + 63644993 ttttttttttttttgagacgaagtcct--gctctgtcacccaggctggagtgcagtggcgcgatcttgactcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaagtgcgtgccgccacgcccggctaatttttgtatttttagtagagacggggtttctccatgttggtctcaaattcccgatctcaggtgatccacccgccttggcctcccaaagtgctgggattacagacgtgagccaccacacccagct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575473 285 + 64156825 ctttttttttttttgagatcaagtc----tctctctctctcaggctggagttctgtggcacgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i rheMac3.chr19 I 36 C 0 s macFas5.chr19 55701746 283 + 59248254 ctttttttttttttgagatcaag------tctctctctctcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaattttcgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgccgggatgacagacaggagccaccacgcccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814336 288 + 51301725 -cttttttttttttgagatgaagtctctttctcactcactcaggctggagttctgtggcgcgatctcagctcactgcaacctctgcctctcgggttcaagcagttctcctgccttggcctcctcagtagctgggattacaagtgcatgccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgaccccaggtaatccacccaccttggcctcccaaagtgctgggatgacagacaggagccagcacgcccagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530637 280 + 50890351 ---cttttttttttgagacgatg------tctctctcactcaggctggagctctgtggcgcgatctcagctcactgcaacctctgcctcctgggttccagcagttctcctgcctcggcctcctcagtagctgggattacaagtgcaagccaccacgcccagctaatttttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgacctcaggtgatccacccacctcggcctcctaaagtgccgggatgacagacaggagccaccacgcccagct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45876304 2755 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=880354.000000 s hg38.chr19_GL949753v2_alt 628770 586 + 796479 acttgtgctttttgaccaacatcttcctctcctaccacccccag-cccctgataacctccacctactctcac----ttctaggagatcaactgttctattttttttttttttttttttttttt------gagtctcgctctgcacacccaggctggagtgcagtgctgcaatctcggatcactgcaacctccgctttccgggttcaagcgattctcctgcctcagcctccagagtcgctgggattac-----tgagccaccgcgcccagcCAGAAGACCCAC-------------------------------------------GCTCCCTAAGACATAACCCACACTGGTGGCCTTTGTtctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacacttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacatgcagtgacccttttcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttcctcctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGG-TTTGCAGGCACCTCCACCACCAGAGCCaa s panTro4.chr19 59836878 580 + 63644993 a------ccttttgaccaacatcttcctctcctaccacccccagccccctggtaacctccacctactttcac----ttctaggagatcaactGttcta--ttttttttttttttttttttttt------gagtctcgctctgcacacctaggctggagtgcagtgctgcaatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagccaGAAGACCCAC-------------------------------------------GctccctaagacataacccacactggcggcctttgttctgacttctcacctgtgctccccacccgctagaaactggcttctctccccacgcttcctctgaagctgtctgtgtgaccaacactaatgagcttccttcctggaacacgcagtgaccctgctcagcccttctcattattgctcccccacagttgtatttgacacgttgaccacttcctcctcgaaggactcacttctctggctttctcggacacttcttgctactcgttttcTGACGGT---TACAGTACCAACAGGTTTTACAGGCGCCTCCACCACCAGAGCCaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60575758 593 + 64156825 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAC--------------tttttttttttttttgagacggagtcgcgctcggcacacccaggctggagtgcagtgctgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGCTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55702029 608 + 59248254 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgccacctagtcttgcttctTTCT---AGATCAACCCCttt---tttttttttttttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgttgccatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcgcccagcCAGGAGACCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCT---GGGGGCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACCTGTGGTCCCCACCTGCTGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACATTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGTGACTCGTTTTCTGACAGT-------------------TTTACCGGCACCCCCACCACCAGAGCCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47814624 615 + 51301725 acttgtgccttttgaccaacatcttcctcccctgccacgcccag-cccctggtaaccgcCACCTAGTCTTGC----TTCTAGGAGATcaaccac--------------tctttttttttttttgagacggagtctcgctctgcacacccaggctggagtgcagtgctgctatctcggatcactgcaacctccgcttcccgggttcaagcgattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgcacccagccaggagaTCCACTCCCACTGACCCTCACTGGTC-CGTGGCTCC--AGGGGGCCATGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCTGCTGGAAACCAGCTTCTCTACCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTTGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCCTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGccag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47530917 604 + 50890351 acttgtgccttttgaccaacatcttcctctcctgccacgcccag-cccctggtaaccgccacctagtcttgc----ttct---aGATCAACCAt------------------tctttttttttgagatggagtctcgctctgcacgcccaggctggagtgcagtgctgcaatctcagatcactgcaacctctgcttcccgggttcaagcaattctcctgcctcagcctccagagtagctgggattac-----tgagccaccgtgcccagcCAGGAGACCCACTCCCACTGACCCTCACTAGTCACGT---TCT----GGGTCCACGTTCCCTAAGACATAACCCACACTGGCAGCCTTTGTTCTGACCTCTCACATGTGGTCCCCACCCGATGGAAACCGGCTTCTCTGCCCACACTTCCTCTGAAGCTGTGTGTGTGACCAACCCTGATGAG----CTTCCTGGAACA--CAGTGACCCTGCTCAGTCCTTCTCATTATTGCTTCTCCATTGTCGTATTTCACACGTTGACCACTTCCTCCTCAAAGGTGTCACCTCGCTGGCCTTCTCGGACACTTCTTGCGACTCGTTTTCTGACAGTTTTACCAGCACCAACAGG-TTTACCGGCACCCCCACCGCCAGAGCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45879059 613 + 49145316 acttctgcccattgaccaacatctcactccct--cctgccccag--cccggggaacctctacctactctcac----ttctaggagatcaacc----------------ttCCTCttttttttttaga--gggtctcactctgcacacccagcctggagtgcagtggcgcaatctcagctcactgcaacctccacttcccaggttgaagcgattctcctgcctcagcctccagagtaattgggattacaggcgtgagccaccgcgcccagcCAGAAGACCCACTCCCAGTGGCCCTCACTGGCC-CATGGCTCTGGGGGGGCCCGCGTTCCCTAAGGCATAACTCACACAGGCAGCCTTTGTTCTGACCTGTTGCGTGTGCTCCCCACCCGCTGGAAACTGGCCCCTCTCCCCACACCTGCTCTGAAGCTGTCTGTGTGACCAACGCTAATGAG----CTTCCTGGAACACACAGTGA-CCTGCTCAGCCGTTCTGATGACTGCTCCTCCACACTTGTATTTGACACATTGACCACTTCCTCCTCAAAGGAGTCAGTTCTCTGGTTCTCTCGGACACTTCCTGCTAGTCGTCTTCTGACGGT---TACAGCATGCACAGG-CTTACGGACGCCTCCAACACCAGAGCCGA i calJac3.chr22 I 2755 I 8977 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=127565.000000 s hg38.chr19_GL949753v2_alt 629356 107 + 796479 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcactccagcctgagtgacagactg s panTro4.chr19 59837458 107 + 63644993 tcccagctactcgggaggctgaggcaggagaatcgttcaaacccgggaggcagaggttgcagtgagtcgagattgcgccactgcattccagcctgagtgacagactg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60576351 101 + 64156825 tcccagctactcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagattgtg------ctctccagcctgggtgacagactg i rheMac3.chr19 C 0 I 548 s macFas5.chr19 55702637 101 + 59248254 tcccagctacgcgggaggctgaggcaggagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtg------ctctccagcctgggtgacagactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815239 107 + 51301725 tcccagctacgcgggaggctgaggcaggagaatcactggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagcctgggtgacagactg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47531521 107 + 50890351 tcccagctacacgggaggctgaggcaagagaatcgctggaacccgggaggcagaggttgcaatgaaccgagatcgtgccactactctccagactgggtgacagactg i chlSab2.chr6 C 0 I 518 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I a score=11690.000000 s hg38.chr19_GL949753v2_alt 629463 50 + 796479 tga---ctcctcaaaaaaaaacaaaaacaaaaacaaaaaaaCTACagtcttgc s panTro4.chr19 59837565 48 + 63644993 tga---ctcctcaaatacaa--aaaaacaaaaacaaaaaaaCTACagtcttgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55702738 41 + 59248254 agagtcctcctcaaaattaa--aaaaat----------aaaTTACAGTCTCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47815346 41 + 51301725 agagtcctcctcaaaattaa--aaaaat----------aaattacagtctcgc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103286325 898 - 106955855 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=20405.000000 s hg38.chr19_GL949753v2_alt 629513 29 + 796479 tctgtcgcccaggatgga----atgcagtggtg s panTro4.chr19 59837613 29 + 63644993 tctgtcgcccaggatgga----atgcagtggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287223 29 - 106955855 tttgtcactcagggtgga----atgcagtggtg i nomLeu3.chr10 I 898 C 0 s macFas5.chr19 55702779 33 + 59248254 TGTGTCAACCAGGATGGAATGCATGCAGTGgtg i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47815387 33 + 51301725 tgtgttgcccaggatggaatgcatgCAGTGGTG i papAnu2.chr19 C 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=58711.000000 s hg38.chr19_GL949753v2_alt 629542 322 + 796479 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagatgggggttttaccatgttagccaggttggtcttgaactcccgacctcatgtgatccgcccaccttggcctcccaaagtgcgaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--acatttggcaatgcccatggtaat s panTro4.chr19 59837642 322 + 63644993 ccatcttggctcactgcaacctctgcctgctggggtctagcgattctcctgcctcagccccccaaggagctgggactacaggcatgtgccgccacgcctggctaatttttgtatttttagtggagacgggggttttaccatgttagccaggttggtcttgaactcctgacctcatgtgatccgcccaccttggcctcccaaagtgctaggattacag------gcccccgcacccagccTAGGATCCTGCACCTCTCTAGCCTagcagttctctgctgggtgattttgctctcca-----ctccagggg--gtatttggtaatgcccatggtaat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287252 313 - 106955855 cagtcttggctcactgccacctccacctccagggttctagtgattctcctgcctcagcctcctgaatagctgggattacaggcatgcaccaccacgcccggctaatttttgtatttttagtagaaat-ggggtttcacaatgttggccagactggtcttgaactcctgacctcaggtgatccaccagcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccggcc-ACCATCTT-CTCCTCTTTATCC-----GCACTTTGC--------CTTGTTCTTCAGGGCTCTGCAGAGGTATCATT------TCCTCCAAGAGAG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=132624.000000 s hg38.chr19_GL949753v2_alt 629864 238 + 796479 ttttaattgtcatgacttgg-ggaggggttctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCACCTTACACCCTTCAGTGCAGGGACAAAGGCAGGGTTACGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT s panTro4.chr19 59837964 238 + 63644993 ttttaattgtcatgacttgg-ggaggggctctactggcatctggtaggtagggtccaggggtgctgctcagcttcctacaatgcccag-ggcagccccagatggcag----------------------cagcaccaaggctgagaaacactgGCTCATGC------------AGAAAGC---AACCAGCTTACCCCCTTCAGTGCAGGGACAAAGGCAGGGTTTTGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287565 238 - 106955855 CTTCCACAGCTCCGACTTgg-gaaggggctctaccggcatctagtaggtagggtccaggaatgctgctcagcttcctacaatgcccag-ggcagccccAGATGGCAG----------------------CAGCCCCAAGGCTGAGAAACACTGGCTCATCC------------AGAAAGC---AACCACCTTACACACTTCAGTGTAGGGACAAAGGCAGGGTTATGAGTCCACGGAAACTCTCCAGTCTCAGCCTA-CGTAAGACGTGGCTATTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55902572 276 + 59248254 tctttgttgtcataacctggcgcagggg--ctagtggcatcggctgggtagaggccagggaggcggctccacacccagcagcgctcagcagctgccccacaaggagaaggatctgccccaaaatgtggctagcgcccaggctgagaaaccctCACTCAAGACAATTTTCTGCGAGAAAACAATAACCACTTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACGTGTCTATTTTT i macFas5.chr19 N 0 N 0 s papAnu2.chr19 47991677 275 + 51301725 TTTTTGTTGTCATAACCTGGCGCAGGGG--CTAGTGGCATCGgctgggtggaggccagggaggcGGCTCCACACCCAGCAGCGCTCAGCAGCTGCCCCACAAGGAAAAGGATCGGCCCCAAAATGTGGCTAGCGCCCAGGCTGAGAAACCCTCACTCAAGA-AATTTTCTGCGAGAAAACAATAACCACCTTAAACCATTCAATTTGAGGGCAAAGGCAGGGTTCCAAGTCCAAGGGCACTCTCCAAGCTCAGCTTAGGGTAGGACATGTCTATTTTT i papAnu2.chr19 N 0 N 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=299668.000000 s hg38.chr19_GL949753v2_alt 630102 1191 + 796479 Ctttcttattgtttttattcatttatttttcttgagacagagtcttgctctgtcgcccaggctggactgcagtggcgcgatctctgctcactgcaagctccgcctcccgggatcacaccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcggcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGATAGAGTCTGAGCCCtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctccgcctcccgggttcaagcgattctcccaccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccatcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtgtggtggcacgtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtcttaaaaaaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctccatccaaattgctggaaatgacattatttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt s panTro4.chr19 59838202 1178 + 63644993 Ctttcttattgtttttattcatttatttttctcgagac--agtcttgctctgtcgcccaggctggactgcagtggcgcgatctcggctcactgcaagctccgcctcccgggatcacgccattctc---------------------ctgggactacaggcgcccgccacctagcccggctaattttttgtatttttaatagagacggggtttcaccatgttagccaggatggtctcgat---ctgacctcgtgatcctcccgcctcagcctctcaaagtgctgggattacaggtgtaagccaccgcacccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCC-----tttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgcaacaacctctgcctcccgggttcaagcaattctcccgccttggcctcccaaagtgctggcattacagacacccactaccatgcctggctaattttttgtacttttagtaagtaaagacagggtttcaccatcttggtcaggatggtctcgaactcctggcctcaagtgatcggcccgcctgggtctcccaaagtgatgagattacaggcgtgagcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttctgccctcccccttctgagactctgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggtacggtggcggtggctcactcctgtaatcccagcactttgggggtgctgaggcaggtgtatcgcctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaatagaaaaatacatagctgggtttggtggctggtgcctataatcccagctactagggaggctgaggttggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacaccattgcactctagcctgggcaacaagagcaaaactgtctt---aaaaaaaaaaaaaagtgagaacatatggattctactcccattagaataatggcctccagctccatccaaattgctggaaatgac---atttcattccttctaatggctgaatagtattccatggtacatagacaccacgttttcttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103287803 1186 - 106955855 Cttttttattgtatttattcatttattttttttgagacagagtctcgct-tgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctccccagtagctgggactataggcgcccgccaccacgcccggctaattttttgtagttttagtagagacggggtttcaccgtattagccaggatggtctcaatctcctgacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggccTTATTCATTTATTTTTTGAGACAGAGTCTGAGCCAtttattttatttatttagagaccaagtctcgctctgttacccaggctggagtgcagtgtcgtggcctcagctcactgtaacaacttccgcctccccggttcaagcgattctcctgccttggcctcccaaagtgctgggattacagacacccactaccatgcccagctaattttttgtgtttttagtaagtaaagacagggtttccccatcttggtcaggctggtctcaaactcctggcctcaagtgagccacccgcctcggtctcccaaagtgatgggattacaggcatgcgcgaccacacTGGcctaatgtgtagttttttatctgtggcctcccttccgccctcccccttctgagcctttgaagcccattacatcactctgcctttgtgtaccaacagcttagctcccactgagaacatacagagccaggcacggtggcggtggctcacgcctgtaatcccagcactttgggggtgctgaggcaggtgcatcacctgaggccaggagttcaagaccagtctggccaacatggtgaaaccccatctctaatgaaaatagaaaaatacatagctgggcgtggtggca------------------------ggaggctgaggttggtgaatcgcttgaacccaggaggcagaggttgcggtgagccaagatcacaccactgcactccagcctgggcaacaagagcgaaactgtctt----aaaaaaaaaaaaagtgagaacatatggattctactcctgttagaataatggcctccagctgcatccaagttgctggaaatgacattatttcattccttctaatggctgaataggattccatggtatatagacaccacgttttcctt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=92713.000000 s hg38.chr19_GL949753v2_alt 631293 1031 + 796479 atccactgtagggaccagccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagacaagagaaaaggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggc--agagagggagaggagacagagagaaagacagcttacgccattatttctgcatatcagggactattagtactttccctaatttactactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagacccc-cccccccacccgctgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccgctggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccctgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccggctaatgattaatgatactcatatataatcatatctaagatctatatctggtataacaattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtgccttgccgcccaca s panTro4.chr19 59839380 1025 + 63644993 atccactgtagggaccagccccacagggttggtaggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagacaagagaaaaggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtggccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagagtgtgagtcacctccattgataggtaa---------ggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagagagagaggagacagagagagagacagcttacgccattatttctgcatatcagggactattagtactttcactaatttaccactgctatctagaaggcagagccaggtgtacaggatggaacatgaaggcggactaggagcgtgaccaccgaagcacagcatcacagggagacggttaggcctccggataactgcgggcaggtctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaacctcccccggggaaagggagaccccacccacccacccaccgcccctttcccggtctgctaagtagcgggtgttgttaattgacaccttttgctaccactggaccatgatccgcttggtgacgggtgtcttcccagacgctggcgtcaccgctagaccaaggagccctctggtggccgtgtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctatgattatagagtgaggattattataatattggaataaaaagtaattgctaccaactaatgattaatgatactcatatataatcacatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggcacctgggtggcttgccgcccaca i panTro4.chr19 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e ponAbe2.chr19 56749060 2137 + 60714840 I e calJac3.chr22 45879672 8977 + 49145316 I e nomLeu3.chr10 103288989 0 - 106955855 C e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=32747.000000 s hg38.chr19_GL949753v2_alt 632324 61 + 796479 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT s panTro4.chr19 59840405 61 + 63644993 atccactcattattcaatgggcacttcggttggttccacatctttgcaattgtgaatGGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751197 61 + 60714840 atccactcattagtcaatgggcactttggttggttccacatctttgcaactgtgaatGGCT i ponAbe2.chr19 I 2137 C 0 s nomLeu3.chr10 103288989 61 - 106955855 atccactcattagtcaatgggcacttcggttggttccacatctttgcaattgtgaatGACT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I e chlSab2.chr6 47531628 518 + 50890351 I e rheMac3.chr19 60576452 548 + 64156825 I a score=652268.000000 s hg38.chr19_GL949753v2_alt 632385 293 + 796479 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccTtgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC s panTro4.chr19 59840466 293 + 63644993 GAGCcagccattcttaactgggggtgattttgtccccatgggggtatctggccacatcccgagagg-ttttttggttgtcacgagttgcagtggggg------cagcctcagactcat-------------ccaagtccaggggtgctgctatacatcacgtgatacacaggacagtccTtgc-----------tacggactgaattggtcccaccaaacgtcatgtacaagcccta-ccccagatgtgactctatgtggacacagggcttttcagaggtaattaagGCTGGTCAGGCGCC-------------GTAATCACAGCACTTTAGGAGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751258 303 + 60714840 GAGCcagccattgttaactgggggtgattttgtccccatggggacatctggccacatcccgaga-g-ctttttggttgtcacgagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggcgctgctatacatcacgtgatacacaggacagtcctcactacagaCTGAAtacggactgaattggtcccaccaaacttcacgtacaagcccta-ccccagatgtgactctatttggacacagggcttttcagaggtaattaagGCTGGCCAGGTGCC-------------GTAATCACGGCACTTTAGGAGTTC i ponAbe2.chr19 C 0 I 275 s nomLeu3.chr10 103289050 294 - 106955855 GAGCcagccattcttaactgggggtgattttgtccccatgggggcatctggccgcatcccgagaggtttttttggttgtcaggagttgcagtggggg------caggctcaggctcat-------------ccaagtccaggggtgctgctatacatcatgtgataca-aggacagtccTtgc-----------tacggactgaattggtcccaccaaacttcacgtacaagccctagccccagatgtcactatatttggccacagcgcttttcagaggtaattaagGCTGGCCAGGCGCG-------------GTAATCACAGCACTTTAGGAGTTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577000 325 + 64156825 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcctgccaaacttcacgtaaaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i rheMac3.chr19 I 548 C 0 s macFas5.chr19 55703290 325 + 59248254 GAGCcagccattcttaacttggggtgattttgtccccatggggacatctggccatatcccgaga-g-cttttcggttgtcatgagttgcagtgggggcaggttcaggctcaggctcatggtgtctcctgggcaaagtccaggtgtgctgctatgcatcatgtggcacacagcacagtccTtgt-----------cacggtctgaattggtcccgccaaacttcacgtacaagccctagccccaggtgtgactctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i macFas5.chr19 N 0 C 0 s papAnu2.chr19 47815908 325 + 51301725 gagcCAGCCATTCTTAACTTGGGGTGATTTTGTCCCCATGGGGACATCTGGCCACATCCCGAGA-G-CTTTTCGGTTGTCACGAGTTGCAGTGGGGGCAGGTTCAGGCTCAGGCTCATGGTGTCTCCTGGGCAAAGTCCAGGTGTGCTGCTATGCATCATGTGGCACACAGGACAGTCCTTGT-----------CACGGTCTGAATTGGTCCCGCCAAACTTCACGTACAAGCCCTAGCCCCAGGCGTGATTCTATTTGGACACAGGGCTTTTCAGAGGTAATTAATgctggccaggcaccgtggctcacgcctgtaatcacagcactttaggagttc i papAnu2.chr19 N 0 C 0 s chlSab2.chr6 47532146 317 + 50890351 GAGCcagccattcttaacttggggtgattttatccccatggggacatctggccacatcccaaga-g-cttttcagttgtcacgagttgcagtggggg------caggctcaggctcacggtgtctgctgggcaaagtccaggtgtgctgctctgcaccatgtggcacacaggacagtccTtgt-----------cacggtctcaattggtcccgccaaacttcacgtacaagccctagccccaggtgtga--ctatttggacacagggcttttcagaggtaattaaTGCTggccaggcaccgtggctcacgcctgtaatcacagcactttaggagTTC i chlSab2.chr6 I 518 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=401729.000000 s hg38.chr19_GL949753v2_alt 632678 175 + 796479 TGTGTTTATTACTGGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaagcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt s panTro4.chr19 59840759 170 + 63644993 TGTGTTTATTACTCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggcgaaggcaaggggataactggaggccagcagttcaagacaagcctggtcaatacagcaagactccatctct-------atattttaaaattagccaagcatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56751836 175 + 60714840 TGTGTTTATTACTCATAAGTGGGTAACagcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggaggccagcagttcaagaccagcctggtcaatacagcaagactccatctctat--aaaatattttaaaattagccaagcatgtt i ponAbe2.chr19 I 275 C 0 s nomLeu3.chr10 103289344 174 - 106955855 TGTGTTTATTA-TCGTAAGTGGGTAAGAgcccagtgtggcagctcacgcgtgtaatcccagcactttgggaggctaaggcaaggggataactggagaccagcagttcaagaccagctgggtcaatacagcgagactccatctctat--aaaatattttggaatgagccaagcatgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577325 175 + 64156825 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55703615 175 + 59248254 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcacttcgggaggctgaggcaaggggataacttgaggtcaggagttcaagaccagcctggtcaatacagcaagaccccatctctat--aaaacattttaaagttagccaggcatgtt i macFas5.chr19 C 0 I 157 s papAnu2.chr19 47816233 175 + 51301725 TGTGTTTATTACTTATAAGTGGGTAAGAGCCCAGGGTGGcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaagaccccatctctgt--aaaacattttaaagttagccaggcatgtt i papAnu2.chr19 C 0 I 157 s chlSab2.chr6 47532463 177 + 50890351 TGTGTTTATTACTTATAAGTGGGTAAGAgcccagtgtggcagctcacacgtgtaatcccagcactttgggaggctgaggcaaggggataacttgagatcaggagttcaagaccagcctggtcaatacagcaaagccccatctctattataaacattttaaagttagccaggcatgtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=311275.000000 s hg38.chr19_GL949753v2_alt 632853 233 + 796479 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccaacccggctgtgggcaacacagcACCACCACCATCTTggctgggcacggtggctcacgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg s panTro4.chr19 59840929 233 + 63644993 tggcatgcacctgtaatcccagc-------tcaggaggctcaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcgcaccattgcactccgacccggCTGTGAGGAACACAGCACCACCACCATCTTggctgggcacagtggctcatgcctgtcatgccagcactttgggaggccgaggcggg-tggctcacctgaggtcaggagtttgagactagcctggccaacatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752011 234 + 60714840 tggcatgcacctgtaatcccagc-------tcaggaggcttaggtgggaggattccttga--------gtttaaggctgcagtgagctaagatcataccattgcactccagcccagctgtgagcaacagagcACCACCACCATCTTggctgggcgtggtggctcacgcctgtcatcccagcactttggaaggccgaggcgggatgggtcacctgaggtcaggagtttgagactagcctggccaacatgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289518 207 - 106955855 tggcatgcacctgtaatcccagc-------tcagggggctcagctgggaggcctccttga--------gtttaaggctgcagggagctaagatcgcaccatcgcactccaacccggctgtgagcaacagagcACCACCACCATCTTGGCTGGGCGTAGTGGCTCA--------------------------Accaaggcggg-tgggtcacctgaggtcagaagtttgagactagcctggccaacatgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577500 247 + 64156825 tggcacgcacctgtaatcccagctacttactcaggaggctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i rheMac3.chr19 C 0 I 126 s macFas5.chr19 55703947 216 + 59248254 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtggtagcaggcacacgtaatccca--gatacgggaggctgaggcatg-agaatcacttgaacctgggagatggaggttacagtgagc------- i macFas5.chr19 I 157 C 0 s papAnu2.chr19 47816565 216 + 51301725 tggctcacgcctgtaatcccaac-act---ttgggaggccgaggcaggtgggtcacctgaggtcaggagtttgagaccaacctg-gccaacatgg------tgaaaccccatct--ctactaaaaacataaaaa----------ttaactgggggtGGTAGCAGGCACACGTAATCCCA--gatacgggaggctgaggcatg-agaatcgcttgaacttgggagatggaggttacagtgagc------- i papAnu2.chr19 I 157 C 0 s chlSab2.chr6 47532640 247 + 50890351 tggcacgcacctgtaatcccagctacttactcaggagtctcaggtgggaggatcgcttga-cccgggagttcaaggctgccatgagctaagattgcaccattgcactccaacctggctgtgagcaacagagcaacaccactatctTgactgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcagg-tgggtcacctgaggtcaggagtttgagaccaacctggccaacatgg i chlSab2.chr6 C 0 I 128 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=194977.000000 s hg38.chr19_GL949753v2_alt 633086 105 + 796479 tgaaatcacgccactGCACTCCAGCCTAGGCAACCAAGTGAGACTCTGTCCGCCCCACCACCCCACCAAA--AA---AAAGACTACTATCTTAAACAAAATCAAAATTTT s panTro4.chr19 59841162 102 + 63644993 tgaaatcacgccactgcactccagcctaggcaaccaagtgagactctgtcCGCCCCACCACCCCACCAAA--AA---AAAA---ACTATCTTAAACAAAATCAACATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752245 107 + 60714840 tgaaatcAcaccactgcactccagtctaggcaaccgagtcagactctgtcCACCCCACCACCCCACCAAAACAA---AAAAACTACCATCTTAAACAAAATGAAAATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289725 105 - 106955855 tgaaatcacgccactgcactccagcctaggcaaccgagtgagactctgtccaccccaccaaaaaaaaaaa--aa---aaaaaCTACCTTCTTAAACAAAATCAAAATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577873 107 + 64156825 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAAATAAAACCTACCATCttaaataaaatcaaaa-ttt i rheMac3.chr19 I 126 C 0 s macFas5.chr19 55704163 94 + 59248254 tgagatcacgccattgcactccagcctg-------------gacCCTGTCCACCCCACCACCCCACCAAA--AAAATAAAACCTACGATCTTAAATAAAATCAAAA-TTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816781 103 + 51301725 tgagatcacgccattgcactccagcctgggcagccgagtgagaccctgtccaccccaccaccccaccaaa--aaaataaaacctaccatct----taaaatcaaaa-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533015 105 + 50890351 tgagatcacaccattgcactccagcctgggcaactgagtgagaccctgtcCACCCCACCACCCCACCAAA--AAA--AAAACCTACTATCTTAAATAAAATCAAAA-TTT i chlSab2.chr6 I 128 C 0 e canFam3.chr1 19993539 8686 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=1033785.000000 s hg38.chr19_GL949753v2_alt 633191 457 + 796479 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCTACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTTACCACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCTTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT s panTro4.chr19 59841264 454 + 63644993 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACGGGAACTTCATGTGCATGTAGAACCCTAAATGTTGACTCAGCCCTACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATCGG----------TGTGAGCTGTATCCCGCT-AAACACTGTT---ACCCACAGCC----TGCATTACTACCAGCTGACTGTAGCCCTAAACACCACAGTGATCTCGAGCATTTGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGTTTGGGTTAGTAAAAAGAACTTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752352 455 + 60714840 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCGACCCAGATATTTTCACTCCCAGTCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAACTCTACACAGGAACTTCATGCGCATGTAGAACCCTAAATGTTGACTCGGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGG----------TGTGAGCTGTATCCCACTAAAACACTGTT---ACCCACAGCC----TGCATTACTAGCTGCTGACTGCGGCCCTAAACACCATGGTGATCTCGAGCATTTGAGAAGGCTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGAGGGCCTTCATGGTATCATTCAGTG-----CTGAAGCCACTCAATCTCCAGGTTCGGGTTAGTAAAAAGAACTTTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103289830 454 - 106955855 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTCAAT--TAAATATGCAGC--AGAGTCCAACCTAGACGTTTTCACTCCCAGCCTCTACCTACTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACTTCATGCCCATGCAGAACCCTACATGTTGACTCAGCCCCACCTCTCATCACCTGACCACTTCCTTT-ATTCACGC----TGTCTCCACCACCCTTCCCATTGA----------TGTGAGCTGTATCCCACT-CAACACTGTT---ACCCACAGCC----TGCGTTACCACCAGCTGACTGTAGCCCTAAACAGCACGGCGACCTCGAGCATTGGAGAAGACTTATCTTGACAAGGGCTCACGAAAGACAGCAACGCTCAACAGCAAGATAAATGAGGGCCTTCATGGGATCATTCAGTG-----CCAAAGCCACTCAACCTTCAGGTTTGCGTTAGTAAGAAGAACTTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60577980 445 + 64156825 taagtaaataaaatatttaGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCACGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCGAAGTC----TGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTG---AGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704257 448 + 59248254 TAAGTAGATAAAATATTTAGGGGAAAAAAAACTTC------AAATATGCAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTATCTTTGTGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGACTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGCTAACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATTTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGACGCCACTCAACCTCCAGGCTTGGGTTAGT---AAGAACTTTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47816884 447 + 51301725 taagtagataaaatatttagggg-aaaaaaacttc------aaatatgcAGC----AATCTGACCCAAACGTTTTCACTCCCAGCCTCTACCTGCTAtctttgtgtctttatttttagcAAATTCTACACAGGAACCTCATGCCCACATAGAACCGTAAATGTTGACTCAGCCCCACCTGTCATGCCTGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----TGCATCACTACCAGTTGACTGTAGCCCTAAACACCATGGCGATCTCCAGCGTTTGAGAAGATTTATCTTGACAAGAGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTACCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGCAAAAAGAActt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533120 447 + 50890351 TAAGTAGATAAAATATTTAGGGG-AAAAAAACTTC-------AATATGCAGC----AATCTGACCCAGATGTTTTCACTCCCAGCCTCTACCTACTATCTTTATGTCTTTATTTTTAGCAAATTCTACACAGGAACCTCATGCCCATGTAGAACTGTAAATGTTGACTCAGCCCCACCTGTCATGACCGGACCACTTCCTTT-ATTCACGCTCAGTGTCTCCACCACACTTCCCACTGA----------TGTGAACTGTATCCCACT-AAACA--GTT---ACCCAAAGTC----GGCATCACTACCAGCTGACTGTAGCCCTAAACACCATGGCGATCTCGAGCGTTTGAGAAGATCTATCTTGACAAGGGCTCACGAAAGACAGCAATGCTCAACAGCAAGATAAATGACAGCCTTCATGGTGCCATTCAGTG-----CTGAAGCCACTCAACCTCCAGGCTTGGGTTAGTAAAAAGAACC--GT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20002225 441 - 122678785 taaataaataaaaattaaaaaaa-taaaaaaaataaaTACCCAATAATCAACATAGATTCTGACCCAGACGTTCTCAATCATA------ACCCACCATCACTATATTTGTATCTTAAAAAAA------AAAAAAGCTTTGTATTCACGTGGAGAC-----------CTCAGCCTCACCTCCAATATCTTGATCACTTCCTCTAAACCATACTCAATTCCTCCACCACGCATCTCCCTGAAATCCTCCCCTGT---CCACACCCTGGT-AAACCCAGTC---ATCTGAAAGCCTAGTAAGCTGATATCCACTGAGTGGAACACCAAATACTACAGCAGCTATGAGGGCTTGAGCACATTTATCCTGATAAGAG------------GGCAACACCAAATGGTGGAAGAAACCCGGTCCTTCCTGGAACAACCCAGTGGCTAAGTTAAGCCACAGGGTTCCCATCCTTGAG---GTAAGAAGACCCCTAT i canFam3.chr1 I 8686 I 5603 e calJac3.chr22 45879672 8977 + 49145316 I a score=516917.000000 s hg38.chr19_GL949753v2_alt 633648 233 + 796479 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccggaggctgggacagaagactcacttgaacccaggaggcagaggttgtagtgagcc s panTro4.chr19 59841718 232 + 63644993 CAggccaggcacagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaaaaccagcctggctaacatggtgaaacctcgtctttactaaaaatac--aaaaattagccaggcatggtgacgcacacctctagtctcagctactccagaggctgggacagaagactcac-tgaacccaggaggcagaggttgtagtgagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56752807 233 + 60714840 CAggccaggcgcagtggctcacgcctgtcatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaattagccaggcatggtggtgcacacctctagtcccagctgctcaagaggctgggacagaagactcacttgaacccaagaggtggaggttgcagtgagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290284 233 - 106955855 CAggccaggcgcagtggctcatgcctgtcatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcctggctaacatggtgaaacctcgtctctactaaaaatac--aaaaactagccaggcatggtgacgcacacctctagtcccagctactcgagaggctgggacagaagactcacttgaagccaggaggtggaggttgcagtgagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578425 234 + 64156825 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctattaaaaatacaaaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctggggcagaagactcacttgaacccagcaggtggaggttgcagtgag-c i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55704705 234 + 59248254 CAGCccaggcacagtggctcacggctgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacacggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggtgtacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817331 201 + 51301725 -------------------------tgtcatcccagcactttgggaggccaaggcaggcaggtcacctgaggtcaggagttcgaaaccagcctggttaacatggggaaaccctgtctctactaaaaatac-aaaaaatcagccaggcgtggtggcgtacacctctagtcccagctactcaggaggctgggacagaagACTCACttgca--------gtggaggttgcagtgagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533567 234 + 50890351 CAGCccagacacagtggctcacggctgtcgtcccagcactttgggaggccaaggcaggcaggtcacctgaggtcagcagttcaaaaccagcctggttgacacggggaaaccctgtctctactaaaaatac-aaaaaattagccaggcatggtggcatacacctctagtcccagctactcaggaggctgggacagaagactcacttgaacccaggaggtggaggttgcagtgagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45879672 8977 + 49145316 I a score=77741.000000 s hg38.chr19_GL949753v2_alt 633881 26 + 796479 aagatcgcaccactgcactccagcct s panTro4.chr19 59841950 26 + 63644993 gagatcgcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753040 26 + 60714840 aagatcgcaccactgcactccagcct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290517 26 - 106955855 aagatcgcaccactgcactccagact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578659 26 + 64156825 aagatcacaccactgcgctccagcct i rheMac3.chr19 C 0 I 28 s macFas5.chr19 55704939 26 + 59248254 aagatcacaccactgcgctccagcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817532 26 + 51301725 gagatcacaccactgcgctccagcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533801 26 + 50890351 aagatcacaccactgcgctccagcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888649 26 + 49145316 Aagatgatgccactgcgctccagcct i calJac3.chr22 I 8977 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=20425.000000 s hg38.chr19_GL949753v2_alt 633907 71 + 796479 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaaaaaaaaagaaaaGAAAACTTTGTCATACA s panTro4.chr19 59841976 61 + 63644993 gggcgaca--gaggcaagact-ccatctcaaaaaaaaaaaaaaaagaa----------aaaaCTTTGTCATACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753066 57 + 60714840 gggcaaca--gaggggagact-ccatctcaagaaaaaaaaaaag--------------aaaaCTTTGTCATACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290543 68 - 106955855 gggcgaca--gaggcaagact-caatctcaaaaaaaaaaaaaaaaaaaaaaaagg---aaaaCTTTGTCATACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55704965 29 + 59248254 aggaaacagcgagaTAAAACTGTCATCTT--------------------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817558 29 + 51301725 aggaaacagtgAGTCAAAACTGTCATCTT--------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533827 29 + 50890351 aggaaacagcgagacAAAACTGTCATCTT--------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888675 47 + 49145316 gggcgaca-------aagact-ccatctcaaaaaacaaaaacaaa-------------------CTGTCATATA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578685 28 + 64156825 I a score=206857.000000 s hg38.chr19_GL949753v2_alt 633978 72 + 796479 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC s panTro4.chr19 59842037 72 + 63644993 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753123 71 + 60714840 AGCTTTCAACCTAAAGCATTAGCCATATGCCCGTG-TTTTGTGCCTGGGACCATGACAAATTTCCCCTTATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290611 72 - 106955855 AGCTTTCAACCTACAGCATTAGCCATATGCCCATGTTTTTGTGCCTGGGACCATGACAACTTTCCCCATATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60578713 72 + 64156825 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTATGCCTGGAACCGTGACAACTTCCTCCATATC i rheMac3.chr19 I 28 I 304 s macFas5.chr19 55704994 72 + 59248254 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCGTGACAACTTCCCCCATATC i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47817587 71 + 51301725 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTG-TTTTGTGCCTGGGACCATGATAACTTCCcatatatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533856 72 + 50890351 AGCTTTCAACCTAAAGCATTAGCCATATGCCCTTGTTTTTGTGCCTGGAACCATGGCAACTTCCCCCATATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888722 72 + 49145316 AGCTTTCAACCTAAAGCCTCGGCTATATGCCCTCGTTTCTGTGCCTGGGACCATGGCAACCTCCCCCGTATC i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I a score=2497.000000 s hg38.chr19_GL949753v2_alt 634050 10 + 796479 AATGCTCtta s panTro4.chr19 59842109 10 + 63644993 AATGCtctta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753194 10 + 60714840 AATGCTCtta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290683 10 - 106955855 AATGCTCGTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705067 6 + 59248254 ----tttttt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47817658 5 + 51301725 -----aattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47533928 2 + 50890351 --------CA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45888794 10 + 49145316 CATGTTCTTA i calJac3.chr22 C 0 I 142 e canFam3.chr1 20002666 5603 - 122678785 I e rheMac3.chr19 60578785 304 + 64156825 I a score=291844.000000 s hg38.chr19_GL949753v2_alt 634060 185 + 796479 ----ttttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcacaatctcagctcaccgcaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcatacaccaccccaccc----------ggctaattttgtatttttagtagagac s panTro4.chr19 59842119 189 + 63644993 ttttttttttttttttcgagacaag-agttttgctcttattgcccaggctggagtgcagtggcacaatctcagctcaccgcaaactccgcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatacaccaccacaccc----------ggctaattttgtatttttagtagagac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753204 182 + 60714840 ------tttttttttttgagac-ag-agttttgcttgtattgcccaggctggagtgcagtggcacgatctcagcttaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctaggattacaggcatgcaccaccacaccc----------ggctaattttgtatttttagtagagac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290693 191 - 106955855 -------ttttttttttgagac-ag-agttttgctcttattgcccaggcaggagtgcagtgacgcgatctcggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcatgcaccaccacgcccggctaattttggctaattttgtatttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705073 188 + 59248254 tttttttttttttttttgagac-ag-agttttgctcttgttgcccaggctggagtgcaatgatgtgatctcagctcaccacaacctccacctcccaggttcaagcgattctcctgcctcagcctctcaagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47817663 188 + 51301725 ttatttattttttttttgagac-gg-agttttgctcttgttgcccaggctggagtgcaatggtgtgatcttggctcactgcaacttccgcctcccaggttcaagcgattctcctgcctcagcctctcgagtacctcggattaccggcatgcaccaccacatcc----------agctaattttgtattgttagtagagac i papAnu2.chr19 C 0 I 2924 s chlSab2.chr6 47533930 178 + 50890351 Attttttttttttttttgagac-agtagttttgctcttgttgcccaggctagagtgcaatggtgtgatctcagctcaccacaacctccacctcccg---------gattctcctgcctcagc--ctcgagtacctgggattacaggcatgcaccaccacgccc----------agctaattttgtattgttagtagagac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e rheMac3.chr19 60578785 304 + 64156825 I a score=27768.000000 s hg38.chr19_GL949753v2_alt 634245 23 + 796479 ggggtttctccatgttgaggctg s panTro4.chr19 59842308 23 + 63644993 ggggtttctccatgttgaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753386 23 + 60714840 ggggtttctccatgttgaggccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103290884 23 - 106955855 ggggtttccccatgttgAAGCTG i nomLeu3.chr10 C 0 M 471 s macFas5.chr19 55705261 22 + 59248254 -gggtttcttcatgttcaggctg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534108 23 + 50890351 ggggtttcttcatgttcaggctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=57863.000000 s hg38.chr19_GL949753v2_alt 634268 84 + 796479 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc s panTro4.chr19 59842331 84 + 63644993 gtctcgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccacagcgcctggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753409 84 + 60714840 gtctcgaactcctgacctcaagtgatccgcccacctcagcctccctaactgctgggattacaggcatgagccaccgcgcccggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705283 61 + 59248254 gtctcgaactcccgacctcaggtgatccacccgcctcggcctgccaaagtgctggaatcac----------------------- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534131 84 + 50890351 gtctcgaactcccaacctcaggtgatccacccgcctcggcctgccaaagtgctgggatcacaggcgtgagccaccgcgcccggc i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=1325.000000 s hg38.chr19_GL949753v2_alt 634352 10 + 796479 TGCTCTTA---TT s panTro4.chr19 59842415 10 + 63644993 TGCTCTTA---TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753493 13 + 60714840 cACTCTTATTCTT i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45888804 142 + 49145316 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e macFas5.chr19 55705344 0 + 59248254 C e rheMac3.chr19 60578785 304 + 64156825 I a score=26130.000000 s hg38.chr19_GL949753v2_alt 634362 97 + 796479 AAAATAGTCTCATCACCTACCGCAAGCGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCGCCTGGAAGCCAGTGCTAACATCATGG s panTro4.chr19 59842425 97 + 63644993 AAAATAGTCTCATCACCTACCGCAAGTGTG-GAGAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTGGCAGCACCTGGAAGCCAGTGCTAACATCATGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753506 96 + 60714840 CAAATAGTCTCATCACCTGCCGCGAGTTTG-GAAAGCCAAGTGAGGAGAGGGGTCAGTCCCTTTTAG-GGGACCTGGAAGCCAGTGCTAACATCATGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55705344 24 + 59248254 -----------------------aagcgtg----agcca----------------------------ccgcgcccg---gcc---------------- i macFas5.chr19 C 0 C 0 s calJac3.chr22 45888946 96 + 49145316 aaaataattTCACC-CCTACCAAAAGTCTGCTGGAGTCAAGTGAGGAGAGGGATCCATCACTTTGGTCAGCACCTGGAAGCCAGTGCTAACGCAAAG- i calJac3.chr22 I 142 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e chlSab2.chr6 47534215 1 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60578785 304 + 64156825 I a score=55779.000000 s hg38.chr19_GL949753v2_alt 634459 33 + 796479 TGACAACTT---TTCATTCTTAAGGAAAATTGCGGA s panTro4.chr19 59842522 33 + 63644993 TGACAACTT---TTCATTCTTAAGGAAAATTGCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753602 33 + 60714840 CGACAACTT---TTCATTCTTAAGGAAAATTGCGGA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60579089 33 + 64156825 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55705368 33 + 59248254 TGACAACTT---GTCATTCTTAAGGAAAATTGTGGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534216 33 + 50890351 TGACAACTT---TTCATTCTTAAGGAAAATTGTGGA i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45889042 36 + 49145316 TGACAACTTTTCTTCGTTCTTAAGGAAAATTGCAGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e nomLeu3.chr10 103290907 471 - 106955855 M e papAnu2.chr19 47817851 2924 + 51301725 I a score=534078.000000 s hg38.chr19_GL949753v2_alt 634492 281 + 796479 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAAACGGGGAGGCGAGAGAGACAGAGACATACACAGAGACTCCCAGAGACAGCCACAC------AGACTCACACAGAAAC---------------------AGACAGACAggctgggctcggtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtagatcacctgaggtcaggagtccgagaacagcctggccaacattgtgaaaccccgtctct s panTro4.chr19 59842555 281 + 63644993 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCCGAGAGAACCGGGGAagcgagagagacagagacatacacagagactcccagagacagccacac------agactcacacagaaac---------------------agaCAGACAggctgggcgcagtggctcacgcctgtaatcccaccactctgggaggctgaggcgggtggatcacctgaggtcaggagtccgacaacagcctggccaacattgtgaaaccccgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753635 275 + 60714840 ----------------------------------------------------------------------------------------GTGACTTCTATGCATTTTCTATGAATAACCAAATACACGGTGTGGAAAAGCTGTGTTTGCCGTGGCAATGGGAAGCAGAGAGAACCAGGGAGGTG--------AGAGACATACACAGAGACTCCCAGAGACAGCCACGC------AGACTCACacagaaac-------------------agagacagacgggctgggcccggtggctcacgcctgtaatcccaccactctgggaggccgaggcgggtggatcacctggggtcaggagttcgagaacagcctggccaacattgtgaaaccccgtctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291378 278 - 106955855 ----------------------------------------------------------------------------------------GTGACTTCTATGCGTTTTCTATG-ATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGCAGAGAGAACCGGGGAGGGG--agagacagagacatacacagagactcccagagacagcca--c------agactcacacagaaac-------------------agagatagacaggctgggcgcggtggctcacgcctgtaatcccaccactttgggaggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaacgttgtgaaaccctgtctct i nomLeu3.chr10 M 471 C 0 s rheMac3.chr19 60579122 275 + 64156825 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCG--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacaCAggctgggtgcagcgactcacacctgtgatcccagcactccgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccccatctct i rheMac3.chr19 C 0 I 420 s macFas5.chr19 55705401 271 + 59248254 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAATGACCAAATACAGGGTGTGGAAAAGCTGTGTTTGCCATGGCAATGGGAAGC--AGAGAACCGGGGAGGCg--agagacagagacat--acagagactcccagagacagccacac------agactcacacagaaac---------------------agacacacaggctgggtgcagcgactcacacctgtgatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaacagcctgcccaacgttgtgaaaccctct---- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534249 268 + 50890351 ----------------------------------------------------------------------------------------GTGGCTTCTATGCATTTTATATGAACGACCAAATACAGGGTGTGGAAAAGCTATGTTTGCCATGGCAATGGGAAGCAGAGAGAACTGGGGAGGCG--AGAGACAGAGACATACACAGAGACTCCCAGAGACAGCCACAC------AGACTCACACAGAAAC---------------------AG----ACAggctgggcgcggcgactcacacctgtaatcccagcgctctgggaggccgaggcgggtggatcacctgaggtcaggagtctgagaacagcctgcccaac---gtgaaaccctct---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889078 380 + 49145316 GTGGCTTTTTgttccctgactgggaattgaacctgggccgcagcagtgagagcactgcatcgtaaccactagaccaccagggaGCAGAGTGGCTTCTATGCATTTTCTATGAATGACCAAATACAG---GTGTAAAAGCTGTGTTTCCCAGGGCAATGGGAAGTAAAGAGAAGGCGGCAGGCG--------AGAGACAT--ACACAGACTCCcagagacagccacacagagatagagacacacggagacagagacacaacagagagacagagacagaCA-gccaggtccagtggctcacatctgtaatcccagcactttgggaggccgagacaggtgaatcac--aaggtcaagagatcgagaccatcctggtcagcatggtgaaaccccatctct i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I a score=45664.000000 s hg38.chr19_GL949753v2_alt 634773 32 + 796479 agtaagaatac-aaaaaattagccaggcatggt s panTro4.chr19 59842836 32 + 63644993 agtaagaatac-aaaaaattagccaggcatggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753910 32 + 60714840 agtaagaacac-aaaaagttagctgggcatggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291656 33 - 106955855 agtaagaatacaaaaaaattagccaggcatggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705672 32 + 59248254 agaaagagtac-aaaaaattagccgggcatggt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47534517 32 + 50890351 agaaagaatac-aaaaaattagcccggcatggt i chlSab2.chr6 C 0 I 225 s calJac3.chr22 45889458 31 + 49145316 actaaaaatac--aaaaattagctggctatggt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=140751.000000 s hg38.chr19_GL949753v2_alt 634805 151 + 796479 ggcacagggctgtaattccggctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgc-ggttgcagtgagctgagatcacgccattgcactccag---------catgggcgacaagagtgaaactccgtctcaaaaaaaa-aaacaaaaa s panTro4.chr19 59842868 145 + 63644993 ggcacagggctgtaattccagctactcggaaggctgaggcaggagaatcacttgaacctgggaggcgcaggttgcagtgagctgagatcacaccattgcactccag---------catgggcgacaagagtgaaactctgtctcaaaaa--------aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56753942 148 + 60714840 ggcacacgactgtaattccggctactcggaaggctgaggcaggagaatctcttgaacctggtaggcggaggttgcagtgagccgagatcacaccattgcgctccag---------catgggcgacaagagtgaaacgccgtctcaaaaaaaa-----aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291689 154 - 106955855 ggcatacgactgtaattccggctactcggaaggctgaggcagaagaatctcttgaacctggtaggcggaggttgcagtgagccaagatcatgctattgcactccagcatgggcgacatgggcgacaagagtgaaactccatctcaaaaa--------aaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705704 144 + 59248254 ggcacatgcctgtaattccagctactcgggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagccgagatcacgccattgcactccag---------cctggggaac-agagagaaactccgtctcaaaaa--------aaaga i macFas5.chr19 C 0 C 0 s calJac3.chr22 45889489 150 + 49145316 ggtgtacgcctgtagtcccagctactcgggaggctgaggcaggacgatgacttgaacccgaaaggcagaggttgcagcgaac-actcctacgccactgcactccc----------cactggtgac-agagcgagactccatttcaaaaaagaaaaacaaaaa i calJac3.chr22 C 0 I 3 e canFam3.chr1 20002666 5603 - 122678785 I e chlSab2.chr6 47534549 225 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=5022.000000 s hg38.chr19_GL949753v2_alt 634956 15 + 796479 aaaaaaacgaaaGAA---- s panTro4.chr19 59843013 15 + 63644993 gaaaaagagaaagaa---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754090 15 + 60714840 gaaagaacagagaga---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291843 15 - 106955855 aaaaaaaaaaaagaa---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705848 19 + 59248254 aaaaaaagaaagagacagc i macFas5.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I e papAnu2.chr19 47817851 2924 + 51301725 I e rheMac3.chr19 60579397 420 + 64156825 I a score=81774.000000 s hg38.chr19_GL949753v2_alt 634971 155 + 796479 CAGAGAGA--------------CACATACAAAGACAGAGAT------AGAAACGCCCAGCGacag------agacacacacagagaaacacagacagacacagagacacacacacagaaacagacacagagacagagagacaaaaagacagacacagagaaacaa--agagagacacacagag--- s panTro4.chr19 59843028 131 + 63644993 CAGagaga--------------cacatacaaagacagagat------agaaacgcccagcgacag------agagacacac------------------------acacagaaacagacacagagacagagaaagagagacaaaaagacagacacagagaaacaa--agagagacacacagag--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754105 135 + 60714840 cagagaga--------------cacatacaaagacagagatacagagaaaaacgcccagagacag------agagacacac------------------------agagaaacacagagaaagagacagacacagagagacacac--acagaaagagacaaaaag--acagagacacagagaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291858 124 - 106955855 cagagagacagagacaaagagtcacatacaaagacagagatacgga-gaaaacacccagagacag------agagacac--------------------------acagagaaacagacacagcgatag--------------------agacacagagaaacaa--agagagac----agag--- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55705867 133 + 59248254 cagagaga--------------cacatacagagacagagatac----agaaacgcccagagacagacgcacagagacacac------------------------aaagagac--agacacacacacagaaacagcgatagagacacagagagagagacaa------aaagagatacagagaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820775 144 + 51301725 cagagaga--------------cacatacagagacagagatac----agaaagacccagagacagacacacagagacacac------------------------aaagagacagagacacacacacagaaacagtgatagagacacagagacagagaaagacagacaaagagatacagagaaaaa i papAnu2.chr19 I 2924 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I e rheMac3.chr19 60579397 420 + 64156825 I a score=6888.000000 s hg38.chr19_GL949753v2_alt 635126 26 + 796479 acagagagagagagagacacaTACAC s panTro4.chr19 59843159 26 + 63644993 acagagacagagagagacacaTACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754240 12 + 60714840 acaaagatagag-------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291982 14 - 106955855 acagagaga------------cacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579817 26 + 64156825 acagagaaacaaagagagacaCACAC i rheMac3.chr19 I 420 C 0 s macFas5.chr19 55706000 16 + 59248254 ----------acagagagacacacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820919 15 + 51301725 -----------aagagagagacacac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I e chlSab2.chr6 47534549 225 + 50890351 I a score=208243.000000 s hg38.chr19_GL949753v2_alt 635152 96 + 796479 ACACACACAGAGAGTAGGAGGCGGCCCGTGGGAGCCGAGCAGAACCAGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAACAGTGACTGTAAGC s panTro4.chr19 59843185 95 + 63644993 ACACACACAGAGAGTAGGAGGCGGCCCGTGGGAGCCAAGCAGAACCCGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAAC-GTGACTGTAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754252 89 + 60714840 -------TAGGGAGTAGGAGCCGGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCACGGCCATCTTCTGAATTAAAGACTGCAGTGACTGTAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103291996 96 - 106955855 acacacagggagagTAGCAGCCAGCCCGTGGGAGCCAGGCAGAGCCGGCGTGAGGCAGGGCCATCTTCTGAATTAAAGGCAATAGTGACTGTAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579843 96 + 64156825 ACACACACAGAAAGTAGGAGCCGGCCCGTCGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706016 96 + 59248254 acacacaCAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCGAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGGAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47820934 96 + 51301725 acacacacagaaagtaGGAGCCGGCCCGTAGGAGCCAGGCAGACCCAGTGTGAGGCAAGGCCATCTTCCGAATTAAAGGCAACAGTGCCTGGAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47534774 96 + 50890351 acaCACACAGAAAGTAGGAGCCGGCCCGTAGGAGCCAGGCAGAGCCAGTGTGAGGCAAGGCCATCTTCTGAATTAAAGGCAACAGTGCCTGTAAGC i chlSab2.chr6 I 225 C 0 e canFam3.chr1 20002666 5603 - 122678785 I e calJac3.chr22 45889639 3 + 49145316 I a score=715126.000000 s hg38.chr19_GL949753v2_alt 635248 325 + 796479 TTGTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGCgctgcttccatg-------------tccaaaggcacagctgagagctgatg----agagaccgcggggcccacagtgccaagcatatgaactatctggccc------------gttTGTCAATGCGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGATAG-----TAGACCACATGGCGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACCGAA s panTro4.chr19 59843280 324 + 63644993 TTGTGCTTTGTGAGTAACAGGATAGATTAGAACA-GGGCTGGCTGTCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTGCTGCTTCCATG-------------TCCAAAGGCACAGCTGAGAGCTGATG----AGAGA-CGCGGGGCCCACAGTACCAAGCATATGAACTATCTGGCCC------------GTTTGTCAATGGGTGGGTTGATCACATAAGTTATGATCACATAAGTCACAAAGA--------CACACTGATCACATAGATGC-ACCTGGCAGCCAG-----TAGACCACGTGGTGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACCGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754341 318 + 60714840 TTGTGCTTTGTGAGTAACGGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGCCAGCCAGGCC---------------CTGTgctgcttccatg-------------tccaaaggcacagctgagcgctgatg----agagaccgtggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAATGCATGGGT--------TAGGATATGAGCACATAAGTCACAAAGA--------CACACTGATCACACAGATGC-ACCAGACAGCTAGCAAACTAGACCAAGTGGTGTCTGAGTTAGGGAAG------------GACATAGAAGAATCAACCGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292092 318 - 106955855 GTGTGCTTTGCAAGTAACAGGATAGATTAGAACA-GGGCTGGCTGCCCATGGCCCACGAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGCCCCAGCCAGACC---------------CTGCgctgcttccatg-------------tccaaaggcacagctgagagctgatg----agagaccacggggcccacagtgccacgcatattaactatctggccc------------gttTGTCAATGCATGGCT--------TAGGATATGAGCAAATAAGTCACAAAGA--------CATACTGATCACATAGATAC-ACCAGGCAGCTAGTAAACTAGACCAAGTGGTGCCCGAGTTAGGGAAG------------AAAATACAAGAATCAACGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60579939 343 + 64156825 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACACGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAGAAAAAAAAGAAATAAGAAATAGAAGAATCAACAGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706112 336 + 59248254 TTGT--TTCGTGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGagccaggcccttggcacggatcatctgcactgcttccgtg-------------tacaaaggcacagctgagagctgatg----agagaccacggggcccacggtgccaagcatattaactatctggccc------------gttTGTCAACGCGTGGGT--------TAGGATATGATCAAATAAGTCACAAAGA--------CACACCGATCACATAGATGCAACCAGACAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGGGAAGAA--------AAGAAATAGAAGAATCAACAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821030 335 + 51301725 TTGT--TTCATGGGTAACAGGATGGATTAGAACA-GGGTTGGCTGCCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCGCAGGTGTGAGCCAGGCCTTTGGCACAGATCATCTGCACTGCTTCCGTG-------------TACAAAGGCACAGCTGAGAGCTGATG----AGAGACCACGGGGCCCACAGTGCCAAGCATATTAACTATCTGGCCC------------GTTTGTCAACGCGTGGGT--------TAGGATATGCTCAAATAAGTCACAAAGA--------CACACTGATCACATAGATGC-GCCAGGCACTTAGTAAACTAGACCAAGGCGTGCCTGagttagagaagaa--------aagaaatagaagaatcaACAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47534870 331 + 50890351 TTGT--TTCGTGGGTAACAGGATGGATGAGAACA-GGGTTGGCTGTCCGTGGCCCTCAAGCTGTTTCTGG----------------------GAAGCCTCCACAGGTGCGAGCCAGGCCCTTGGCACAGATCATCTGCActgcttccgtg-------------tacaaaggcacagctcagagctgatg----agagaccacggggcccacagtgccaagcatattaactatctggccc------------gttTGTCAACACGGGGGT--------TAGGATACGATCAAATAAGTCACAAAGA--------CACACCAATCACATAGATGC-ACCAGGCAGTTAGTAAACTAGACCAAGGGGTGCCTGAGTTAGAGAAGAA------------AATAGAAGAATCAACAGAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20008269 390 - 122678785 TTGTCCTTCATAAGTAACAGAAGAGATTAGAAcaggggttggcaaactatggcccatgggccaaagctggcctattgcctatttttataaataaagttttattggaacacagccatacc--------cattcatttgcgtattgtctatggctctttgcacactacaacagcaaagt--ggaattgtcgtaacagtgaccatacagcttacag-acctaaaatattagctatctggctctttacagaaaaagttAACTACCTTCTGGGA--------TAGAATATCCTAAAACTAGTTAAGGAGGCCACAGACCACACTGATCATGTAGACTC-ATCAGACAACTTTTAAATTTAGCCAAGTAATACCTGAGCTAGGGCAAAA----AAAAAAAAAGAAAGAAAACCAACATAA i canFam3.chr1 I 5603 C 0 e calJac3.chr22 45889639 3 + 49145316 I a score=1416875.000000 s hg38.chr19_GL949753v2_alt 635573 458 + 796479 TCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACAAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTCATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-TAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGAC--AGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA s panTro4.chr19 59843604 460 + 63644993 TCATCCCTGAACTTCTTAGCAATACTTCCTCCTAGACGAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCCTGAGCATGTCAATAAACGCAGCTGCAGCGAGAGTGCTCTAAC--TTTATTA---------TCCCTGTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTCGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTACCTCTCGACATAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACATCTTAGAG--ACCCGAATCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTGGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGACTTCCAAATTAGTTTCATAGGTCTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56754659 460 + 60714840 TCATCCCTGAACTTCTTAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTACCATGTTTA-TTGCAGGTTTGCTCTTGAGCATGTCAATAAACGCAGCTGCAACGAGCGTGCTCTAAC--TTTATTA---------TCCCTTTGAGAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAGTCCTACATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCCTAAGACATCTTAGAG--ACCCAATTCCCGCTTC---CTGTGTAACGCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACCGAGGTGCCATTGCCCCGGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAACTAGTTCCATAGCTCTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103292410 457 - 106955855 TCATCCCTGAACTTCTTAGCAACACTTCCTCCTAGACTAAGCA--CAGAGTACCATATTTA-TTGCAGGTTT-CTCTTGAGCATGTCAATAAACGCAGCTGCAACGA--GTGCTCTAAC--TTTATTA---------TCCCTGTGAAAAAGTACATAGCGTGATGTGAAGGGGGTGCGTGACTGGTGCAGAATCTCCCAAAAA-CAGTGAGAAAACCAGTGTCAAATCCTATATCTTGACACAGACTCTAGTGTTAACATGTGACCCTCTGACCTGCATTCATAAGACACCTTAGAG--ACCCGATTCCCGCTTC---CTGTGTAATTCACAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGGAGGTGCCGTTGGCCCAGAAGCATTGCAATCAATAGTCAGCTTCGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAGATTAGTTTCATAGGTCTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60580282 458 + 64156825 TCATCCCTGAACTTCTCAGCGATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55706448 458 + 59248254 TCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAACAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------GCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGTGAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTGGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGATTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47821365 458 + 51301725 TCATCCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAATGCAGCTGCAATGAGAGTGCTC--AC--TTTATTA---------TCCCTGTGAGAAGGTGCGTAGTGTGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCAAGAAAACCAGTGTCAAATTTGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATCCACAAAATATCTTAGAG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCaaaaaaaGTCACAGCACGGAGGTGCCGTTGCCCCGGAAGCATTGCAATCAATTGTCAGCTTAggattcttttctttcacttcctcCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47535201 458 + 50890351 TCGTGCCTGAACTTCTCAGCAATACTTCTTCCTAGACTAAGCA--CAGAGTAGCATGTTTA-TGGCAGGTTTACCCTTGAGCATGTCAATAAACGCAGCTGCAACGAGAGTGCTC--AC--TTTATTA---------TCCCCGTGAGAAGGTGCATAGTATGATGTGAAGGGGGTGTGTGACTTGTGCAGAATCTCCCACAAA-CAGCGAGAAAACCAGTGTCGAATTCGACATCTTGACACAGACTCTAGTGTTAACACGTGACCCTCTGACCTTCATTCACAAAATATCTTAGGG--ACCAGATTCCCGCTTC---CTGTGTAATTCGTAGAG-CGATCCCAGGCTGCTCAGCAAAAAAAGTCACAGCACGCAGGTGCCGTTGCCCCGGAAGCACTGCAATCAATTGTCAGCTTAGGATTCTTTTCTTTCACTTCCTCCAACAGCTTCTTGATTTCCAAATTAGTTTCATAGGTCTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45889642 438 + 49145316 TCATCCCTGAACTTCTTAGTAGT-----TTCCTAGACTGAGCA--CAAAGCACTGTATGTA-CTGCAGGTTTGCTCTTGGGCACGTCAATAAA--CAGCTCCAACGAGAATGCTCCAACTTTTTATTA---------TCCCGGTGAGAAAGTGCACAGCATGAAGTGAAGGGCGTGCGTGGCTTCTGCAGAATCTCCCACGAA-CAGCGAGAAAAGCAGTGTCAAGTCCTGC-----------------AGAGTTAACATGTGACCCTCTGACCCACATTCATACGGTATCTTAGAG--ACCAGATTCCCACTTC---TCATGTAATTCGTATGG-CAATCCCAGCCTGCTCAGCAAAAAGAGTCACAGCACCCAGGTGCGGCCTCCCCGGAAGCATCGCAGTCAATCGTCAGCTTGGGATTCTTTCCTTTCACTTCCTCCAGCAGCTTCTCGATTTCCAAACTAGTGTCATAGGTCTTCA i calJac3.chr22 I 3 C 0 s canFam3.chr1 20008659 470 - 122678785 CCATCTATGAACTT---AGTAGTATTTTTTCCTAGACTAAGTATGCCAAGTATAAAGTTAACCCTTAAGTTAGGTCTTAGGTACATTAATAAGCACAGTTTCAAACAAAGTTCTTTGCT--TTTACTATAGCTTGTGTCCTTGTGAAATAACAGACATTTTGACATAAAGTACGTGTGTGACTTGTGCAGAATTTACCATAAACCAGAGAGAAAGCCAGCACTAAATGCTACATTTTGACCCA------ATAATTAACATATTACCCTCTGGTCTTCATTCGTGGTGTGTCTAAGAGAAATAAGATCACCCCTTCAAGACACATAGTCACTAAAGATGGTCTCAGGGTGTTCAAGACAGGAAGTCACAACATGGAGACCTGCTTGCTCTGGCATCACTGCATTCAATGGTCAGATCTGGATTGTGGCCTTTCACATCTTTCAGCAGCTTCTGGATTTCCACGCTAGACTTGTCTATCTCCA i canFam3.chr1 C 0 C 0 a score=87095.000000 s hg38.chr19_GL949753v2_alt 636031 32 + 796479 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- s panTro4.chr19 59844064 32 + 63644993 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i panTro4.chr19 C 0 I 26 s ponAbe2.chr19 56755119 32 + 60714840 ACCTGGAAGGATCAGAGAACACAAATGTTCCC-------------------------- i ponAbe2.chr19 C 0 I 142 s nomLeu3.chr10 103292867 32 - 106955855 ACCTGGAGGGATCAGAGAACACAAATGTTCCC-------------------------- i nomLeu3.chr10 C 0 I 26 s rheMac3.chr19 60580740 32 + 64156825 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i rheMac3.chr19 C 0 I 26 s macFas5.chr19 55706906 32 + 59248254 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47821823 32 + 51301725 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i papAnu2.chr19 C 0 I 26 s chlSab2.chr6 47535659 32 + 50890351 ACCTGCAGGGATCAGAGAACACAAATGTTCCC-------------------------- i chlSab2.chr6 C 0 I 26 s calJac3.chr22 45890080 57 + 49145316 GCCTGGA-GGATCAGAGAACACAAATGTTTGCAGAGCGCCTACAGTTTCACTGTCCCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=773357.000000 s hg38.chr19_GL949753v2_alt 636063 323 + 796479 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGAttttct-gggggacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatggggtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatccacctcggcctc s panTro4.chr19 59844122 324 + 63644993 AGAAATTCATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcaattctcatgcctcaggctcctgaataactgtgattacaggtgtgcaccaccacgcttggctaagtt---ttgta-------tttacagt-----------------------agagatagggtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccatcgacctcggcctc i panTro4.chr19 I 26 C 0 s ponAbe2.chr19 56755293 323 + 60714840 AGAAATACATTCTCAACTACCCAGGATGCCTGAATATCTGTTTTCAAACACTC-AATCAGGAAACGTTTTTGGGATCTTCTGCGGGgacagggtct-----tgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccagctcccaagttcaagcgattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacactcggctaagtt---ttgta-------tttacagt-----------------------agagacggggtttcgacatgttagccaggctgg-------------------------------tctcaaacttctggcctcaagtgatcagtccacctcggcctc i ponAbe2.chr19 I 142 C 0 s nomLeu3.chr10 103292925 324 - 106955855 AGAAATTCATTCTCAACTAACCAGGATGCCTGAATATCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTTCTGGGGGgacagggtct-----tgctctgttgcccaggctggggtacagtggtgccattttggctctctgcaacctccagctcctgagttcaagcaattctcatgcctcaggctcctgagtaactgtgattacaggtgtgcaccaccacgctcggctaagtt---ttgta-------tttacagt-----------------------acagatggggtttcaacacgttagccaggctgg-------------------------------tctcgaacttctggcctcaagtgatccgtccacctcggcctc i nomLeu3.chr10 I 26 C 0 s rheMac3.chr19 60580798 328 + 64156825 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggctaaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcacgcttggctaagtt---ttgca-------tttacagt-----------------------agagatggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccatccccctcggcctc i rheMac3.chr19 I 26 C 0 s macFas5.chr19 55706964 328 + 59248254 AGAAATTCATTCTCAACTACCCAGGATGCCTGAACATCTGTCTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-TGGGGGGACAGGTTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctccgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcctgagtaacggggattacaggtgtgcaccatcatgcttggctaagtt---ttgca-------tttacagt-----------------------agagacggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47821881 346 + 51301725 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACATTTTTGGGATTTT-TGGggggacagggtctggctctgctctgtggcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgactctcatgccttagcctcc----taacagggattacaggtgtgcaccatcacgcttggctaagtt---tt-ta-------tttACAGGCTAAGTTTTGTAAATGCCGCCTAAGAGGTGGcatttcaacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i papAnu2.chr19 I 26 I 1232 s chlSab2.chr6 47535717 328 + 50890351 AGAAATTCACTCTCAACTACCCAGGATGCCTGAACACCTGTTTTCAAACACTCAAAGCAGGAAACGTTTTTGGGATTTT-GGGGAGGACAGGGTCTGGCTCTgctctgttgcccaggctggggtgcagtggtgccatcttggctctctgcaacctccaggtcccaggttcaagcgattctcatgtcttagcctcctgagtaacagggattacaggtgtgcgccaccacgcttggctaagtt---ttgta-------tttatagt-----------------------agaggcggcgtttcgacatgttagccaggctgg-------------------------------tctcgaacttctggcctcgagtgatccgtccacctcggcctc i chlSab2.chr6 I 26 C 0 s calJac3.chr22 45890137 306 + 49145316 AGAAATTCA--CTCAGTTACCCAGGATGCCTGAATATGTTTTCttg---------------------tttcgttgttttttttagagacagggttt-----caccatgttagccaggatgg-------------------------tcccgatctactgacctcagg--------atccgcctgcctcagcctcccaaaattctgggattacaggcatgagccactgcgcccagcaggattcacttataaagctgcttcactgt--------------------------gactggttgtggccacaatgcccaggctggagtacaatggtgccatcttgactcactgcaacctccagttcctgggttcgagtgattctcatgcctcagcctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=67054.000000 s hg38.chr19_GL949753v2_alt 636386 31 + 796479 ccaaagccatgggattacagatgtgagccac s panTro4.chr19 59844446 31 + 63644993 ccaaagccatgggattacagatgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755616 31 + 60714840 ccaaagccatgggattacagacatgagccat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293249 31 - 106955855 ccaaagccatgggattacagacgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581126 31 + 64156825 ccaaagccatgggattacagatgtgagccac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707292 31 + 59248254 ccaaagccatgggattacagatgtgagccac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536045 31 + 50890351 ccaaagccatgggattacagatgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890443 31 + 49145316 ctgagtatctgtgattacaggtgtgcaccac i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=3279.000000 s hg38.chr19_GL949753v2_alt 636417 2 + 796479 ag s panTro4.chr19 59844477 2 + 63644993 ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755647 2 + 60714840 gg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293280 2 - 106955855 ag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581157 2 + 64156825 ag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707323 2 + 59248254 ag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536076 2 + 50890351 ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45890474 278 + 49145316 I e papAnu2.chr19 47822227 1232 + 51301725 I a score=139371.000000 s hg38.chr19_GL949753v2_alt 636419 63 + 796479 cacccagtcAGAAAAGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT s panTro4.chr19 59844479 63 + 63644993 cacccagccAGAAAGGTTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTATAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755649 60 + 60714840 cacccggccAGAAACGTTTTCTAAA---AAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293282 63 - 106955855 cacccggccAGAAACGTTTTCTAAAAAGAAATTTAGATCCACACAAGGGGGA-TCCTTATAAGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581159 63 + 64156825 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707325 63 + 59248254 cacccagccAGAAACATTTTCTAAAAAGAAATTTAGACCCACACAATGGGGA-TCCTTGTAAGT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47536078 63 + 50890351 cacccagccAGAAACGTTTTCTAAAAAGAAATTTAGACACACACAATGGGGA-TCCTTATAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890752 64 + 49145316 cacccggcTGGAAACATTTTCTAAAAAAGAATTTAGATCCACACAATGAGAATTCCTTATAAGT i calJac3.chr22 I 278 C 0 e canFam3.chr1 20009129 0 - 122678785 C e papAnu2.chr19 47822227 1232 + 51301725 I a score=249104.000000 s hg38.chr19_GL949753v2_alt 636482 147 + 796479 CTAAGA----AAAAAAAGATTATggccaggcacggtgtctcgcacctgtagtcccagcactttgggaggccaaggcaggcagattgcttgagctccgcagttcaaggccagcctgggcaacacgg------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag s panTro4.chr19 59844542 147 + 63644993 CTAAGA----AAAAAGAGATTATggccaggcacggtgtctcgcacctgtagtcccagcgctttgggaggccaaggcaggcagattgcttgagctccacagttcaaggccagcctgggcaacacag------------------------------------------------------------tgaaaccctgtctctacc--------aaaaatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755709 147 + 60714840 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagcactttgggaggccaaggcaggcagatcgcttgagctcagcagttcaagaccagcctgggcaacacgg------------------------------------------------------------tgaaaccgtgtctctacc--------aaaaatac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293345 120 - 106955855 CTAAGA----AAAAAAAGATTATggccaggcccggtgtctcacacctgtagtcccagaactttgggaggccaagtcaggcagattgcttgagctcagcagttcaa--------------------------------------------------------------------------------------catgtc-cagct--------aaaaatac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60581222 141 + 64156825 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcggattgc--------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55707388 145 + 59248254 CTAAGA----AAAAAGA--TTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggctggcagattgcttgagctcagcagttcaagaccagactgggcaacacag------------------------------------------------------------caaaaccctgtctctacc--------aaaaatac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823459 153 + 51301725 ctaaaaatacaaaaaaa--t--tggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacaggcggatcac--gaggtcaggagatcgagaccatcctggctaacacgg------------------------------------------------------------tgaaaccccgtctctactaaaaaaaaaaaaatac i papAnu2.chr19 I 1232 C 0 s chlSab2.chr6 47536141 144 + 50890351 CTAAGA----AAAAACAGCTTATggccaggcacggtgtctcacacctgtagtcccagcactttgggaggccaaggccggcagattgcttgagctcagcagttcaagacaagcctgggcaacacag------------------------------------------------------------cgaaaccctgtctct-----------aaaaatac i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890816 135 + 49145316 CTAAGA----AAAAAAG-ATTATGGCCAGGCACAG-----------tgtaattccagctctttgggaggctgcaggaggcagatcacttgagctcaggagttcaagacctgcccaggtaacacag------------------------------------------------------------tgaaatcctgcctctacc--------aaaactac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=732870.000000 s hg38.chr19_GL949753v2_alt 636629 451 + 796479 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaagaggatcacttgagcccaggaggcggaggttgcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtgagc-----------------------------------------------------------------------------------------------caataccgcaccactgtactgcagcccgggtgaca- s panTro4.chr19 59844689 447 + 63644993 aaaa----agccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggcggaggcaggaggatcacttgggcccacgaggcggaggtttcaacgagctagagattgccctactgcactccagcct-ggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaCAGATAATCAggctggtgcacggtgactcacgcctataattccagcactttgggaggccgaggcgggcagatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccagc-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcatggtggcagacaactgtaataccagctactcaggaggctgagacaggagaatcgctttgaacctgggaggcagatgttgcagtaagc-----------------------------------------------------------------------------------------------caatatcgcaccactgtactgcagcccgggtgcca- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56755856 448 + 60714840 aaaaagttagccaggaatgg----------------------------------------------tggtgcacgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcagaggttgcaacgagctggagattgccctactgcactccagcctgggtaacagagtaaaacatgccttt-aaaaaataaatttaaaaaaTAGATAATCAggccggtgcacggtggctcacgcctataattccagcactttgggaggccaagacgggtggatcacctgaggtcaggaattcgaga-------------------------------ccagcctggccaac-atagtgaaaccccgtctc------------tactaaaaatac--aaaaattagctgggcgtggtggcagacaactgtaataccagctacttaggaggctgagacaggagaatcactttgaacctgggagaca----ttgcagtgagc-----------------------------------------------------------------------------------------------caatatcgcgccactgtactgcagcctgggtgaca- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60581363 450 + 64156825 --------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------gaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgagattgggagttcaaga-------------------------------ccagcctgaccaac-atggagaaacaccatctc------------tactaacaatacaaaaaaattagccaggcatggtggcccatgctcaccatcccagctactcaggaggctgaggcaggagaattgc-ctgaacccgggaggcagaggttgcagtgagc-----------------------------------------------------------------------------------------------taaaattgcaccacggcactccagcctgggtaaca- i rheMac3.chr19 C 0 I 700 s macFas5.chr19 55707533 452 + 59248254 aaaaagttaggcaggaatgg----------------------------------------------tgatgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggcggaggttgcaacaagatagagattgccctactgcactccagcctgggtaacacagtaaaacatgtctttaaaaaaataaaTTTGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggtgggcagatcacctgaggtcaggagttcgaga-------------------------------ccagcctggccaac-atagtgaaaacccgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggtggacgttgcagtgagc-----------------------------------------------------------------------------------------------caatatcatgccactgtactgcaaccc-ggtgaca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47823612 572 + 51301725 aaaaaactagccgggcgcag----------------------------------------------tggcgggcgcctgtagtcccaactactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagct-gagatccagccactgcactccagcctaggcggcagagcgagactccatctcaaaaaaaaaaattag------------------ccgggcatggtggcccatgctcgcaatcccagctactcaggaggctgaggcagaagaatcacttgaacctgggaggctgaggttgcagtgagcagagatcacaccattgccctctagcctgggcaataagagtgaaactccgtctcaaaaaagtaaaataaaataaatac--aaaaattagccaggcatgctggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgc-ttgaacccgggaggcagaggttgcagtgagcaggagaattgcttgaggcagTGTGAGAGAATTGCAGTGAGGCAGGATtgcagtgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagattgcaccactgcactccagcctgggcaaca- i papAnu2.chr19 C 0 I 25 s chlSab2.chr6 47536285 452 + 50890351 aaaaagttagccaggaatgg----------------------------------------------tggtgcatgcctatagtcccagctactcgggaggctgaggcaggaggatcacttgagcccaggaggtggaggttgcaacaagatggagattgccctactgcactccagcctgggtaacacagtaaaacatgtcttt-aaaaaataaaTTCGAAAACTAGATAATCAggccggggcatggtggctcatgcctataatcccagcactttgggagactgaggcgggcagatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaac-attgtgaaaacctgtctc------------tactaaaaatac--aaaaattagctggttgtggtggcagacacctgaaataccagctactcaggaggctgagacatgagaatcactttgaacctgggaggcagacgttacagtgagc-----------------------------------------------------------------------------------------------caatatcgtgccactgtactgcaacctgggtgaca- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45890951 408 + 49145316 aaaa----agccaggaatgg----------------------------------------------tagtacacacctatagtcccagctagtcaggaggctgagacagcaggatcacttaagcgcaggaggcagaggttgcaacgagctggagatggccctactgca-tttagcctgggtaaca-----aaATATGTCTTT-----------------------------Aggccggcgc--ggtggctcatgcctgtaatcccagcactttgggaggccgagacgggtggatcac--gaggttgaga--ttgaga-------------------------------ccatcctggtcaac-gtggtgaaacgccgtctc------------gactaaaaatac--aaaaattagctggtcacggtggcgcgtgcctgtagtcccagctactggggaggctgaggcaggagaattgc-ctgaacccaggaggtggaggttgcggtgagc-----------------------------------------------------------------------------------------------caagatcgcatcattgcactccagcctgggtaacaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=20617.000000 s hg38.chr19_GL949753v2_alt 637080 14 + 796479 gagcgagactctgc s panTro4.chr19 59845136 14 + 63644993 gagcgagactctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756304 14 + 60714840 gagtaagactctgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55707985 14 + 59248254 gagcaagactctgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824209 14 + 51301725 gaaaaagactttgt i papAnu2.chr19 I 25 C 0 s chlSab2.chr6 47536737 14 + 50890351 gagcaagactctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891359 14 + 49145316 gagcaaaactccgt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60581813 700 + 64156825 I a score=4438.000000 s hg38.chr19_GL949753v2_alt 637094 3 + 796479 ctc s panTro4.chr19 59845150 3 + 63644993 ctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756318 3 + 60714840 ctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582513 3 + 64156825 CTC i rheMac3.chr19 I 700 C 0 s macFas5.chr19 55707999 3 + 59248254 ctc i macFas5.chr19 C 0 I 606 s papAnu2.chr19 47824223 3 + 51301725 ctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47536751 3 + 50890351 ctc i chlSab2.chr6 C 0 I 631 s calJac3.chr22 45891373 2 + 49145316 ct- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=21904.000000 s hg38.chr19_GL949753v2_alt 637097 14 + 796479 caaa--------------------taaataaata s panTro4.chr19 59845153 14 + 63644993 caaa--------------------taaataaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756321 14 + 60714840 caaa--------------------taaataaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582516 14 + 64156825 CAAA--------------------TAGATAAATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708608 34 + 59248254 caaacaagaaaaaGACTCTGTCTCCAAATAAATA i macFas5.chr19 I 606 C 0 s papAnu2.chr19 47824226 14 + 51301725 caaa--------------------tagataaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537385 14 + 50890351 CAAA--------------------TAGATAAATA i chlSab2.chr6 I 631 C 0 s calJac3.chr22 45891375 14 + 49145316 caaa--------------------aaaaTATATA i calJac3.chr22 C 0 I 306 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=1238589.000000 s hg38.chr19_GL949753v2_alt 637111 752 + 796479 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagGAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCCAAACATATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaatcgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatgcaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatccgggtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacacggccacacagtgcagcagagcaaaacgttgtctcag---------------------------------------aaaagaaaa-------------gacaaaGGCAAGAAGAAACTAAAGGTAGATTACGTTA s panTro4.chr19 59845167 772 + 63644993 aaaaaTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAGTGATAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGGGTGGTGAttgtggagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccaaagAAGGAACTGAGGAATGAGAAAAGAAAT-ACGCCCAAAAC--ATGACATAAGAGACCACAGGGGGCTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCTCGGTCCCACCAACAAGAGAAGCATGACACTATTTAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagac--gtgtgaaaaattgt------------accttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATGAAGCAGTTTACATGCGTATCATCTCTACAACTAAAATAACTCTTGAATAAGACAAGTGggctgtgcacagtggctcacgcctgcaatcccggtactttttgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---cctcggcaacatggccacacagtgccacagagcaaaacgttgtctcag-aaaagaaaa-----gaaaagaaaagaa-----------aaaagaaaa-------------gagaaagGCAAGAAGAAACTAAAGGTAGATTACGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56756335 762 + 60714840 aaaaaTAGTGGCGAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATGAGAGCAAACTTGGCTCTAACGTGGCTGCAGCATGCAAGCCTGTGTATGTGAACATGAGGAGTGGTGAttgtagagacactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgat-ctcccaccttggcctccca---gagGAACTGAAGAATGAGAACAGAAAT-ACGCCCAAAACATGTGACATAAGAGACCACAGGGGGCTAGAGATTTGTCAACAATAGTCCTTGGTGGCATGACAGACCTCGGTCCCACCAGCAAGAGAAGCATGACACTATTGAGCTCAAGTTTCATGATATACCCCTAAAACCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcctaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactgggcatCATTAAGCAGTTTACATGTGTATCATCTCTACAGCTAAAATAACTCTTGAATAAGACAAGTGGgctgtgcacagtggctcacgcctgcaatctcagtactttgtgaggccaagacaggaggatcgtttgaagccaggagtttgagaa---ccttggcaacacagcCACACAGTGCAACAGAGCAAAACGTTGTCTCAG---------------------------------------AAAAGAAAA-------------GAGAAAGGCAAGAAGAAACTAAAGGTAGATTATGTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60582530 736 + 64156825 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCGGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagagGAGGAACTGAGGAATGAGAACAGAAATAACATCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGATCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaagtgcagacatgtgtgaaaaatcgtaccttgggaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATCATCTCTACAACTA----AACTCTTGAACAAGACAAGTGggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagcTACATAGTACAGCAGAGCAAAACATTGTCTaaagaaaaggaaa-----------------------------agggccggg-------------------------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55708642 808 + 59248254 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGATAGCAGCACGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacaatcctcccaccttggcctcccagaggaggaactgagGAATGAGAACAGAAATAACATCCAAAACATATGACACAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTGAACTTTCAT-ATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcattccaataatggaacactagacatCGTTAAGCAGTTTAAATGCGTATcatctctacaacta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtgctttgtgaggccaagacaggaggatcgctcgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaagaaaaggaaaggacagaaaagggaaaagggtaag-----aggaaaggggaaagggaaaaa-gaaaaaggcaagaagaaaCT-GAGGTAGATTATGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47824240 794 + 51301725 aaaactagTGGCAAATCAAACCTTCAGTAGAACTAAGAGAATGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACGTGGCTCTAACATGACAGCAGCATGCAACGCTGTGCTTGTGAACATGAGGGGTGGTCATTGTAGAGGCACtggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggagGAACTGAGGAATGAGAACAGAAAT-ACGTCCAAAACATATGACATAAGAGACCACA--GGGTTAGAGATTTGTCACCAATAGTCCTTGGTGGCATTACAGACCATGGTCCCACTAGCAAGAGAAACATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAACCTTAACTCATTTATGCCAGAGGTTACAATTATTTGAACTGCAGAC--GTGTGAAAAATCGtaccttggcaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataatggaacactagacATCGTTAAGCAGTTTACATGCGTA-----TCTACAACTA----AACTCTTGAACAAGACAAgtgggctgtgcacagtggctcacgtctgtaatcctagtactttgtgaggccaacacaggaggatccctcgaagccaggagtttgagaacagccttggcaacatagctaCATAGTACAGCAGAGCAAAACATTGtctcaagaaaaggaaaggacagaaaagggaaaagggaaaggggaaagggaaaaa-------------gaaaaaggcaagaagaaact-gaggtagattatgtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47537399 800 + 50890351 AAAACTAGTGGCAAATCAAACCTTCAGTAGAACTAAGAGATTGCCAGAGTGAACCCCAGGGTTAATCATAGCAAACATGGCTCTAACATGACAGCAGCATGCAACCCTGTGCATGTGAACATGAGGGGTGGTCAttgtagaggcactggcttgctatgttgcccaggctggtctcaaactcctggcctcaaacgatcctcccaccttggcctcccagaggaggaactgagGAATGATAACAGAAAT-ACGTCCAAAACATATGACACAAGAGACCTCA--GGGTTGGAGATTTGTCACCAATAGTCCTTGGTGGCATTATAGACCATAGTCCCACTAGCAAGAGAAGCATGACACTGTATAGCTCAACTTTCATGATATACCCCTAAAATCTTAAcccatttatgccagaggttacaattatttgaactgcagacatgtgtgaaaaatcgtaccttgttaatgaccttgagcaggatataaataactcccacatgcttagcgttccaataacggaacactagacatCGTTAAGCAGTTTAAATGTGTATcatctcta----ta----aactcttgaacaagacaagtgggctgtgcacagtggctcacgcctataatcctagtactttgcgaggccaacgcaggaggatcgcttgaagccaggagtttgagaacagccttggcaacatagctacatagtacagcagagcaaaacattgtctcaggaaaaggaaa-----ggagagggaaaagggtaag-----gggaaaggggaaagggaaaaagaaaaaaggcaaGAAGAAACT-GAGGTGGACTATGtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=305770.000000 s hg38.chr19_GL949753v2_alt 637863 283 + 796479 AAATAAGTCACTGAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaattcgagaccagcctggccaacatagtgaaaccccatctctact-aaaaatac-aaaaaattagccgggcgtggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag s panTro4.chr19 59845939 282 + 63644993 AAATAAGTCACTGAggccgggcgcagtggctcacgcctgtaatctcagcactttgggaggccgaggcgggcggatcac--gaagtcaggagatcaagaccatcctggctaacacagcgaaaccccgtctctact-aaaaatacaaaaaaattagccgggcatggtggcgggcgcct--------------------gtagtcccagctgctcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagatcgcaccgcttcactccagcctgggcgacagag i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583266 248 + 64156825 ---------------------cgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcagcagatcgagac------------gacggtgaaaccccgtctctact-aaaaatac-aaaaaattagccgggcgcggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcaggagaatggcgtaaacccaggaggcggagcttgcattgagccgagatcgtgccactgcactccagcctgggcgacagag i rheMac3.chr19 C 0 I 413 s macFas5.chr19 55709450 275 + 59248254 AAATAAGTCATTGA-------Tgtggtggctcaagcctgtaaccccagcactctgggaggccgagacgggcagatcgc--aaggtcaggagatcgagaccaccctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccaggcgaggtggcgggcgcct--------------------gtagtcccagctactcaggaggctgaggcgggagaatggcatgaacccgggaggcggagcttgcagtgagctgagatctggccactgcactccagcctgggcgacacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825034 274 + 51301725 aaataagtcattga-------tgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcat--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagccgggcgtggtggcgggcgcct--------------------gtagtcccagctactcgggacgctgaggcgggagaatggcgtgaacccaggaggcagagcttgcagtgagctgagatccagccactgcactccagcctgggcgacaga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538199 295 + 50890351 aaataagttattga-------tgcagtggctcaagcctgtaattccagcactctgggaggccgagacgggcagatcgc--gaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatac-aaaaaactagctgggcgaggtggcgggcgcctgtagtcccagctactcgggagtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatgcggccactgcactccagcgcgggcgacagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=-4645.000000 s hg38.chr19_GL949753v2_alt 638146 65 + 796479 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaaGACAGACT----------CCGTCTCAAAAAAA s panTro4.chr19 59846221 75 + 63644993 actggagtctctgtctcaaaaaaaagacagattcaaaaaaaaagaCAGACTCAAAAAAAGACTGTCTCAAAAAAA i panTro4.chr19 C 0 C 0 s macFas5.chr19 55709725 2 + 59248254 -cg------------------------------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825308 22 + 51301725 acggga--ctccatctcaaaaaaa--------------------------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538494 21 + 50890351 -caaga--ctccatctcaaaaaaa--------------------------------------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60583514 413 + 64156825 I a score=3018.000000 s hg38.chr19_GL949753v2_alt 638211 5 + 796479 AGACT s panTro4.chr19 59846296 5 + 63644993 AGACT i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583927 5 + 64156825 agact i rheMac3.chr19 I 413 C 0 s macFas5.chr19 55709727 5 + 59248254 agact i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47538515 5 + 50890351 ataat i chlSab2.chr6 C 0 I 14 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e papAnu2.chr19 47825330 0 + 51301725 C a score=6419.000000 s hg38.chr19_GL949753v2_alt 638216 20 + 796479 CCGTCTCAAAAAAAAATAAA s panTro4.chr19 59846301 20 + 63644993 CCATCTCAAAAAAAAATAAA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583932 18 + 64156825 ccgtctcaaaaaaaaata-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709732 18 + 59248254 ccgtctcaaaaaaaaata-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825330 3 + 51301725 ---------------ata-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47538520 14 + 50890351 I a score=4633.000000 s hg38.chr19_GL949753v2_alt 638236 6 + 796479 AAATAC s panTro4.chr19 59846321 6 + 63644993 AAATAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60583950 6 + 64156825 aaatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709750 6 + 59248254 aaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825333 6 + 51301725 aaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538534 6 + 50890351 aaatta i chlSab2.chr6 I 14 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56757097 0 + 60714840 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=902897.000000 s hg38.chr19_GL949753v2_alt 638242 535 + 796479 AAATAAGTCATTGAAAAGATATACACGGGTCACAACTAAGGGAGCATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGGgtgtgtg--------tgtgtgtgtgtgtgtgCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACACACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgagcacagtggctcacgcctgtaatcccggcactttgagaggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac s panTro4.chr19 59846327 533 + 63644993 AAATAAGTCATTGAAAAGATATACATGGGTCACAACTAAGGGAGCATCTGTAGGACAATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGATTAGGG--GTGTG--------TGTGTGTGTGTGTATGCTCATGCACACACATACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGGACTAAGTGTTTTGGGGGAAA-GTTGGACAATATTCAATTCACAGAGCATTTTAGAAAAGTATCTAATTTTTAAATTATCTCCTAAGCTAAGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTACACTCACTCCC-AAAAAA--A-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcactttgagaggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757097 505 + 60714840 AAATAAGTCATTGAAAAGATATACACAGTTCACAATTAAGGGAACATCTGTAGGACGATCTTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATATAATGAT----------------------------------------TGCAAACACACACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTCTCAGTATGCCTAGTACTAAGTGTTTTGGGGGGAATGTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATCCCTACAAAGAGTGCACCCACTCCC-AAAAAA--AGCTCTTCTCTGCATGTGAAATTCACCATGTGAAACAGCCATCCCAGggccgggcacagtggctcacacctgtaatcccagcattttgagaggctgaggcaggtggatcacctgaagttgggagtttgagaccaacctgaccaacatggtgaaacccc-atctctac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60583956 535 + 64156825 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATTTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG--GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55709756 535 + 59248254 aaataaGTCATTGAAAAGATATACATGGTTCACAATTAAGGGAACATCTGTAGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGCGATGAGGG--GGGTG--------TGTGTGCGTGTGTACGCTCATGCACACACATACACTCAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTTGGGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTACAGAAGTATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAACAGTGCACCCACTCCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCAGggctgggtgtggtggctcacacctgtaatcccagcactttgaggggctgaggcgggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtttctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825339 535 + 51301725 aaataagtcatttaaaaGATATACATGGCTCACAATTATGGGAACATCTGTGGTACGATCCTCTGAAAAGCTAAGACCCAGGACAGCTCTGGGAACTACCTATTTTTGGATGTAGCGAtgaggg--gggtg--------tgtgtgcatgtgtgcgtgtgtacgCTCATGTACACACAAGCTTCCAGTCTGTACTCCAGGATGATTTAAACTGTCAGTATGCCAAGTACTAAGTGTTT-GGGGGAAT-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGaagtatctaatttttaaattatctcctAAGCTAGGAGTGTGCTATAGAAAGATGCCTTAAGTTGATTCCTACAAAGAGTGCACCCACTTCC-AAAAAACCA-CTCTTCTCTGCATGGGAAATTCACCATGTGAAACAGCCATCCCagggctgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccctggtctctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47538540 538 + 50890351 aaataaGTCATTTAAAAGATATACATGGTTCACAATTACGGGAACATCTGTGGGATGATCTTCTGAAAAGCTAAGACCCAGGACAACTCTGGGAACTACCTATTTTTGGATGTAGTGATGAGGG--GGCTGTGTGTGCATGTGTGCGTGTGTACGCTCATGCACACACATACACACAAGCTTCCAGTCTATACTCCAGGATGATCTAAACTGTCAGTAAGCCAAGTACTAAGTGTTG-GGGGGAAC-GTTGGACAATATTCAATTCACAGAGCATTTTAGAGAAATATCTAATTTTTAAATTATCTCCTAAGCTAGGAGTGTGCTACAGAAAGATGCC-----TTGATTCCTACAAACAGTGCACCCACTCCCAAAAAAAATA-CTCTTCTCTGCATGAGAAATTCACCATGTGGAACAGCCATCCCAGggccgggtgtgttggctcacacctgtaatcccagcactttgaggggctgaggcaggtggatcacctgaggttgggagtttgagaccaacctgaccaacatagtgaaaccct-gtctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e calJac3.chr22 45891389 306 + 49145316 I e nomLeu3.chr10 103293465 0 - 106955855 C a score=95115.000000 s hg38.chr19_GL949753v2_alt 638777 45 + 796479 taaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa s panTro4.chr19 59846860 45 + 63644993 taaaaacta-----caaaaattggccaggtgccgtggctcatgcctgtaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757602 45 + 60714840 taaaaacta-----caaaaattggccaggtgccgtgactcatgcctgtaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60584491 45 + 64156825 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i rheMac3.chr19 C 0 I 274 s macFas5.chr19 55710291 45 + 59248254 tgaaaacta-----caaaaattggccaggtgcagtggctcatgcctgtaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825874 45 + 51301725 taaaaacta-----caaaaattggccaggtgtagtggctcatgcctgtaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539078 45 + 50890351 taaaaacta-----caaaaattgaccaggtgcagtggctcatgcctgtaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891695 50 + 49145316 TAAAAACAAAGTGGCAAATCATGGCCATTTgtggtggttcacacctataa i calJac3.chr22 I 306 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C a score=253210.000000 s hg38.chr19_GL949753v2_alt 638822 161 + 796479 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca s panTro4.chr19 59846905 161 + 63644993 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcga-gcgactgtaatcctagctactcaggaggctgaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757647 161 + 60714840 tcccagcactttgggaggccaaggcgagaagatcacctgaggtcaggagctcgagaccagcctggccaacatggcaaaacaccgtctctactaaaaatacaaaaattagctgggcgtggtggcgg-gcgcctgtagtcctagctactcgggaggctgaggca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710336 161 + 59248254 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaaccctgtctctactaaaagtacaaaaattagtcgggcgtggtggcaa-gcaactgtaatcccagctactcaggaggctgaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47825919 147 + 51301725 ctccagcactttggaaggccaaggcaggcagatcacctgaggtcaggagctcaagacca--------------gtgaaaccctgtctctactaaaagtacaaaaattagccgggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539123 161 + 50890351 tcccagcactttagaaggccaaggcaggcagatcacctgaggtcaggagctcaagaccagcctggccaatatggtgaaatcccgtctctactaaaaatacaaaaattagccaggcgtggtggcaa-gcgactgtaatcccagctactcaggaggctgaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45891745 156 + 49145316 tcccagcactttggg------aggcaggaggatctcatgaggtcatgagttcgagatcagcccaaccaacatggtaaatccccgtctgtactaaaaatacaaacattagctgggtgtggtggcaaggggactgtaatcgcagctactcaggaggctgaggca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e rheMac3.chr19 60584536 274 + 64156825 I a score=27749.000000 s hg38.chr19_GL949753v2_alt 638983 28 + 796479 ggagaatcacttgaacccaggaggcaga s panTro4.chr19 59847066 28 + 63644993 ggagaatcacttgaacccaggaggcaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757808 28 + 60714840 ggagaatcacttgaacccaagaggtgga i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55710497 28 + 59248254 ggaaaatcacttgaacccagggagcgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826066 28 + 51301725 ggaaaatcgcttgaacccagggagcgga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45891901 21 + 49145316 ggagaatcgcttaaacccagg------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e rheMac3.chr19 60584536 274 + 64156825 I a score=91418.000000 s hg38.chr19_GL949753v2_alt 639011 222 + 796479 ggttgcactgagccgagatagcgccactgcactccagcctgggggacagagagagactctgtcttt-----------aaaaaaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaatcgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaac--a s panTro4.chr19 59847094 235 + 63644993 ggttgtactgagccgagatagcgccactgcactccagcctgggcgacagagagagactctgtctttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattagccagctgtggtggtgtgtacctgtaatcccagctactcaggaggttgaggcaggaaaattgcttcaacctgtgagaaggaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcaacaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56757836 217 + 60714840 ggttgcactgagctgagatagcgccactgcactccagcctgggcgacagagagagactctgtctt--------------aaaaaaaaaaaaaaaaaaaaaattagccagctgtggtg--gtgtacctgtaatcccagctactcaggaggttgaggcagaaaaatcgtttcaacctgtgagacagaggctgcagtgagtcaagatcgcgccactgcactccagcctgggcgac--a i ponAbe2.chr19 C 0 I 6 s calJac3.chr22 45891922 217 + 49145316 --ttacagtgagctgagctagagccactgcattctaggctgggcaacagagtgagatttcatctc-------------agaaTACATATTATACACAAAAATTAgccaggcgtggtgctgcgtacctgtaatcccagctacagaggaggctga-gcaggagaatcacttgaacttgtgaagtaggggctgcagtgagtcaagactgcaccactgcactccagcctgggcaac--a i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=2801.000000 s hg38.chr19_GL949753v2_alt 639233 11 + 796479 --gtgagactcca s panTro4.chr19 59847329 11 + 63644993 --gtgagactcca i panTro4.chr19 C 0 C 0 s calJac3.chr22 45892139 13 + 49145316 gagcgagactcca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758053 6 + 60714840 I e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=61169.000000 s hg38.chr19_GL949753v2_alt 639244 143 + 796479 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggctcacctctgtaatcccaccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta s panTro4.chr19 59847340 140 + 63644993 tcccaaaaagcaaaaaccaaaaaggccgggtgcaatggttcacctctgtaatc---ccactttgggaggccgaggcaggtggctcacctgaggtcaggagttcaagactagcctgggcaacatggtgaaacccctctctacta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758059 143 + 60714840 tcccaaaaagcaaaaaacaaaaaggccgggtgcaatggctcacatctgcaatcccaccactttgggaggccaaggcaggtggctcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacccctctctacta i ponAbe2.chr19 I 6 I 7 s calJac3.chr22 45892152 131 + 49145316 tcccaaaaaggaaaaaa-aaaaagtccaggtacaatggctcatgtctgtaatcccagcactttggaaggccaagataggtggctcacccgaggtcaggagttc-agaccagcctggccaagatggtgaaatac---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e nomLeu3.chr10 103293465 0 - 106955855 C e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=29303.000000 s hg38.chr19_GL949753v2_alt 639387 61 + 796479 aaaaattagccaggcatggtggcaggcatctgtaattccagctacttgggagg-ccaaggtg s panTro4.chr19 59847480 61 + 63644993 aaaaattagccaggcgtggtggcaggcatctgtaattccagctacttgagagg-ccaaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293465 61 - 106955855 aaaaattagccgggcgtggtggcaggcatctgtaatcccagctacttgggagg-ccaaggtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45892283 62 + 49145316 agaaattagctggatgtggtagtaggcacctgtaatcccagctacttgggaggcccaaggtg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e chlSab2.chr6 47539284 0 + 50890351 C e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=22225.000000 s hg38.chr19_GL949753v2_alt 639448 28 + 796479 ggagaatcgcttgaacccaggaggtggg s panTro4.chr19 59847541 28 + 63644993 ggagaatcgcttgaacccaggaggtggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293526 28 - 106955855 ggagaatcgcttgaacccaggaggtgga i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47539284 28 + 50890351 agaaaatcgcttgaacccagggggtgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892345 28 + 49145316 ggagaattgcttgaacccgggacatgga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e papAnu2.chr19 47826094 0 + 51301725 C e macFas5.chr19 55710525 0 + 59248254 C e rheMac3.chr19 60584536 274 + 64156825 I a score=36775.000000 s hg38.chr19_GL949753v2_alt 639476 23 + 796479 ggttgcagtgagccaagatcgca s panTro4.chr19 59847569 23 + 63644993 ggttgcagtgagccaagatcgca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103293554 23 - 106955855 ggttgcattgagccaagatcgca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55710525 23 + 59248254 gcttgcagtgagccgagatcgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826094 23 + 51301725 gcttgcagtgagccgagatcgca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539312 23 + 50890351 gcttgcagtgagccgagatcgta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892373 23 + 49145316 ggttccagtgagctgagatcata i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I a score=68094.000000 s hg38.chr19_GL949753v2_alt 639499 65 + 796479 ccactgcactccagcctgggctacaagaacaaaactcc--gtctcaaaaaaaaaaaaagaaaaagaa s nomLeu3.chr10 103293577 67 - 106955855 ccactgcactccagactgggctgcaagaacaaaactccccatctcaaaaaaaaaaaaagaaaaagaa i nomLeu3.chr10 C 0 I 8 s macFas5.chr19 55710548 65 + 59248254 ccactgcactccagcctgggctacaagagcgaaactcc--gtctcaaaaaaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826117 65 + 51301725 ccactgcattccagcttgggttacAAGAGGgaaattcc--ttttcaaaaaaaaaaaaaaaaaaagaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539335 65 + 50890351 ccactgcactacagcctgggctacaagagcgaaactcc--atctcaaaaaaaaaaaaagaaaaaata i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892396 63 + 49145316 tcactgcactccggcctaggctacaagagagaaactct--att--aaaaaaaaaaaaaaaaaaggaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e ponAbe2.chr19 56758202 7 + 60714840 I e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=4242.000000 s hg38.chr19_GL949753v2_alt 639564 4 + 796479 --------aaaa s ponAbe2.chr19 56758209 4 + 60714840 --------aaaa i ponAbe2.chr19 I 7 C 0 s nomLeu3.chr10 103293652 4 - 106955855 --------aaaa i nomLeu3.chr10 I 8 C 0 s macFas5.chr19 55710613 4 + 59248254 --------aaga i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47826182 4 + 51301725 --------aaaa i papAnu2.chr19 C 0 I 8 s chlSab2.chr6 47539400 4 + 50890351 --------caaa i chlSab2.chr6 C 0 I 1 s calJac3.chr22 45892459 12 + 49145316 agaaatacaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e rheMac3.chr19 60584536 274 + 64156825 I e panTro4.chr19 59847592 0 + 63644993 C a score=250450.000000 s hg38.chr19_GL949753v2_alt 639568 106 + 796479 attagctggacatgttggcatgcctctaggcccagctactcatgaggctgaggcaggagaattgcttgaacctgagaggcagaggttgcggtgagccaagattgcg s ponAbe2.chr19 56758213 106 + 60714840 attagccgggcatggtggcaggcctctaggcctagctactctggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgtggtgagccaagatcgcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293656 106 - 106955855 attagctggacatgttggcatgcctctaggcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccaagatctcg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584810 106 + 64156825 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagcctagatcgcg i rheMac3.chr19 I 274 C 0 s macFas5.chr19 55710630 106 + 59248254 attagctggacatgctggcgtgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcagtgagccaagatcgcg i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47826194 106 + 51301725 attagctggacatgctggcgtgcctgtaggcccagttattcaggaggctgaggcaggagaattgcttgaacttgggaggcgggggttgcggtgagccaagatcgcg i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47539405 106 + 50890351 attagctggacatgctggcatgcctgtaggcccagctactcaggaggctgaggcaggagaattgcttgaacttgggaggcggaggttgcggtgagccaagatcgcg i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45892471 106 + 49145316 attagctgggcgtgctggcacacctgtaggcccagctactcaggaggctgaggcaggagaattgcctgaacctgggaggcagaggttgcagtgagccaagatcaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C e panTro4.chr19 59847592 0 + 63644993 C a score=135934.000000 s hg38.chr19_GL949753v2_alt 639674 89 + 796479 ccactgcactccagcctgaatgacagagcacgactccatctcaaaaaaacaaaaacaaaaaacaaaacaaaacaaaa--caaaaAAC-CCAT s panTro4.chr19 59847592 77 + 63644993 ccactgcactccagcctgaatgacagagcaagactccatctcaaaaaaacaaaa--------caaaacaaaacaaaa------AAAC-CCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758319 80 + 60714840 tcactgcactccagcctgagtgacagagcaagactccatctcaaaacaaaaaca---------aaaacaaaaacaaa--aaaaaaac-CCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293762 84 - 106955855 ccattgcactccagcctgggtgacagagcaagactccatttcaaaacaaaaaac--------aaaaacaaaaaacaaaCAAAAAAACACCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584916 61 + 64156825 ccactgcactccggcctgggtgacagagcaagactccatgtc----------------------------aaaaaaa--aaaaaaaG-CCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710736 67 + 59248254 ccactgcactccggcctgggtgacagagcaagactccatgtc-------aaaaa---------------aaaaaaaa--aaaaaaaG-CCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826300 74 + 51301725 ccactgcattccggcctgggtgacagagcaagactccatgtcaaaaaaaaaaaa---------------aaaaaaaa--aaaaaaag-ccat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539511 60 + 50890351 ccactgcactccggcctgggtgacagagcaagactccatgtc-----------------------------aaaaaa--aaaaaaaG-CCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892577 57 + 49145316 ccactgcactccagcctgcgtgacagagcaagactccgtctc--------------------------------aaa--caaaaaaG-CTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009129 0 - 122678785 C a score=729774.000000 s hg38.chr19_GL949753v2_alt 639763 198 + 796479 ACCTGAGTATCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAATCC s panTro4.chr19 59847669 198 + 63644993 ACCTGAGTGTCTTCAAGGACCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758399 198 + 60714840 ACCTGAGTGTCTTCAAGCATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGAGGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103293846 198 - 106955855 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCCAAAGAGCTTAATTATGCCGCTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCACAGGCTGTTGAGGAAGAACATGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60584977 198 + 64156825 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55710803 198 + 59248254 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826374 198 + 51301725 accTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539571 198 + 50890351 ACCTGAGTGTCTTCAAGGATCCAGTTCTTTGTCTTAGAACCCTAAAGAGCTGAATTATGCCACTCT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCAAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGCTGACAATAGAAAGGCATGAGGGAGCAGCTCCAGAGGCTGTTGAGGAAGAACATGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892634 198 + 49145316 ACCTGAGTGTCTTCAAGGATCCAGGTCTTTGTTTTAGAACCCCAAGGAGCTTAATGATGCCACTTT-TCCACAAATGATTCTGGCCCAGGTCCAGAGTTTCCAGCTTCTGATTGCTGATGAGAGCAGATCCAAGATGTTGGCAATAGAAAGGCAGAAGGGAGCAGCTCCAGAGGCTGTTGGGGAAGAACATGGAAACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20009129 197 - 122678785 ACCTGAGTATCTTTAGGGGGCCA--TTATTGTTTTAAAACCTCAAAGAGCACCATTATTCCACTCTGCCCTCAAGATATTCTGTCCTAGGTCCAGAGTTTCTAGCCACTGAATGCTGTTGAGAACAGGTGCGAGACCCTGACAACAGGAGGGAGTGATGGAATAGCCATAGAGCCTGTAGGGAAAGAGCACAGAAAACC i canFam3.chr1 C 0 I 1851 a score=395019.000000 s hg38.chr19_GL949753v2_alt 639961 134 + 796479 ACGCATTCACTGAGCAGGTAg-------------tggctcaagcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa s panTro4.chr19 59847867 134 + 63644993 ACGCATTCACTGAGCAGGTAg-------------tggctcacgcgtgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggtgttcgagaccagccttgccaacacggtcaaaccccatctctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758597 134 + 60714840 ACGCATTCACTGAGCAGgtgg-------------tggctcacgcctgtaatcccaacacttcgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctactaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103294044 134 - 106955855 ACACATTCACTGAGCAGGTAg-------------tggctcacacctgtcatcccaacactttgggaggccaaggcgggtggatcacttgaggccaggggttcgagaccagccttgccaacatggtcaaaccccatctctaataaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585175 147 + 64156825 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711001 147 + 59248254 GTGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctctattaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47826572 147 + 51301725 GTGCATTCACTGAGCAGGTAGTGGCCAGatgccatggctcatgtctgtaatcccagcacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaactccatctctattaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47539769 147 + 50890351 ATGCATTCACTGAGCAGGTAGTggccagatgccatggctcatgtctgtaatcccaacacttcaagaggccaaggcaggtggatcacttgaggccaggagctcgaaaccagccttgccaacatggtcaaaccccatctttattaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45892832 145 + 49145316 ATGCATTCACTGAGCAGGTAGGggccggatgccgtggctcacgcctgtaatcccagcactttgggaggcggaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctct--taaaaa i calJac3.chr22 C 0 I 29 e canFam3.chr1 20009326 1851 - 122678785 I a score=1029478.000000 s hg38.chr19_GL949753v2_alt 640095 459 + 796479 tacaaagattaggcagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtagatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgctagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagcccagattgcgccactgcactccagcctgggcaatagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggaaccacctataattccagctactcga------gaggcaggagaatcgcctgaa-cca--ggaggcagaggttgtagttagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc s panTro4.chr19 59848001 459 + 63644993 tacaaagattaggtagggcgtggggacagacacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcaaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgcactccagcctgggcaacagaatgagactccatctcacaaatatataacataaaatgaaaatacaaaaattagccaggtatggtggagccacctataattccaggtactcga------gaggcaggagaatcacctgaa-cca--ggaggcagaggttgtagtgagccaacatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56758731 458 + 60714840 tacaaagattaggcagggtgtgggggtaggcacctgtagccccagca-ccttgggaggccgaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccgtgcatggtggtgtgtgcctttaatgccagctacttgggaggcggaggcacaagaatcgcttcagcctgggaggcggaggttacagtgagccaagatcgcgccactgtactccagcctgggcaacagaatgagactccatctcacaaatatataaaataaaatg-aaatacaaaaattagccaggtatgctggcaccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaa-cca--ggaggcagaggttgtagtgagccaagatatcaccactgcattccagcttgggtgaaagagtgagacttggtctc i ponAbe2.chr19 C 0 I 6 s nomLeu3.chr10 103294178 460 - 106955855 tacaaagattaggcagggcgtggggacaggcacctgtagccccagcattcttgggaggcagaggagggtggatcacctgaggtcaggagttcgagaccagccaggccaacatggcgaaaccccatctctacaaaaaattagccatgcatggtggtgtgtgcctttaatgccagctacttgggaggctgaggcacaagaatcgcttgagcctgggaggcggaggttacggtgagccaagatcacgccactgcactccagcctaggcaatagaatgagactccatctcacaaatatataaaat-aaatgaaaatacaaaaattagccaggtatagtggcgccacctgtaattccaactactcaa------gaggcaggagaatcgcttgaaccca--ggaggcagaggttgtagtgagccaacgtatcatcactgcattccagcttgggtgaaagagtgagacttggtctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585322 462 + 64156825 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccgacatatcaccactgcactgcagcttgggtggaagagtgagactcggt--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55711148 467 + 59248254 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccgtctctacaaaaaattagccacacatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagaggttgcagtgagtgaagatcatgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-acataaaacgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactgctcgagaggctgaggcaggagaattgcttgaacccaggggaggcagaggttgtagtgagccgagatcacaccactgcactccagcctgggcaacagagtgaaactccatctc i macFas5.chr19 C 0 I 13180 s papAnu2.chr19 47826719 465 + 51301725 tgcaaagatgaGGCAGGGTGTgaaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatggtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcactggagcctgggaggcagagattgcagtgagcgaagatcgtgccactgcactccaggctgggcaacagagtgaaactccatctcataaataaat-ccatacaatgaaaatacaaaaattagccaggtatggtgtagCCACCTGTCATTCCAACTAGTcaagacgctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtgagccaacatatcaccactacactgcagcttgggtggaagagtgagactcggtctc i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47539916 465 + 50890351 tgcaaagatgaggcagggtgtggaggcaggcacctgtaatcccagca-ccttgggaggctaaggaaggtggatcacctgagttcaggagtttgagaccagccaggccaacatagtgaaaccccatctctacaaaaaattagccacgcatggtggtgagtgcctttaatgccagctacttgggaaggtgaggcacaagaatcgcttgagcctgggaggcagaggttgcagtgagccaggatcgtgccactgcactccagcctgggcaacagagtgaaactccatctcataaataaat-ccataaaatgaaaatacaaaaattagccaggtatggtgttgccacctgtcattccaactactcgagaggctgaggcaggagaattgcttgaaccca--ggaggcagaggttgtagtcagccaacatatcaccactgcactgcagcttgggtggaagagtgagactcggtctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=330548.000000 s hg38.chr19_GL949753v2_alt 640554 172 + 796479 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAAGGCAGAGGGG-AGTGAGCAGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA s panTro4.chr19 59848460 172 + 63644993 aaacaaaacaaaacaaaaaaacaaGCAGCATATTTGCTGGGGCTCCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAAGAAATCCTTGTCCTC--AGAGT---TTTTAGT-------GACAGCAGACATCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759195 175 + 60714840 aaacaaaacaaaacaaaaAAACAAGCAGCAtatttgctggggctccagtagtgaggaaatgcagaggggaagtgagcggaagaaatccttgtcctcatagagc---ttttagt-------GACAGCAGACATCTCGATGTGTTCTATTGAAGACAATGGATGATGGCATTAAAATAAACAGGGTA i ponAbe2.chr19 I 6 C 0 s nomLeu3.chr10 103294638 172 - 106955855 aacaaaaaaaaaaaaaaaaaacaaGCAGCATATTTACTGGGGCTTCAGTAGTGAGGAAATGCAGAGGGG-AGTGAGCAGAGCAAATCCTTGTCCTT--AGAGT---TTTTAGT-------GACAGCAGACACCTCGATATGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585784 176 + 64156825 aaaaaaaaaaaaaaaaaaaaaaaaGGAACATTTGTGCTGGGAATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT------C--AGAGTTTATTTTAGTGACAGCAGACAGCAGACATCCGGATGTGTTCTATTGCAGACAATGGATGATGGTATTAAAATAAACAGGGTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724795 171 + 59248254 aaaaaaaaaaaaaaaaaaaaaaaaGCAACATATGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAAG-AGTGAGATGAAGAAATCCG----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGATA i macFas5.chr19 I 13180 C 0 s papAnu2.chr19 47827187 158 + 51301725 aaaaaaaaaaaaaaaaaaaaaaaagcaacatatgTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTgagatgaagaaa-------------------tattttagt-------gACAGCAGACATCTGGATGTGTTCTATTGAAGACAATGGATGACGGTATTAAAATAAACAGGATA i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47540381 162 + 50890351 ---------aaaaaaaaaaaaaaaagaaCATTTGTGCTGGGGATCCAGTACTGAGGAAATGCAGAGAGG-AGTGAGATGAAGAAATCCT----CAC--AGAGTTTATTTTAGT-------GACAGCAGACATCCGGATGTGTTCTATTGAAGACAATGGATGATGGTATTAAAATAAACAGGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45892977 29 + 49145316 I a score=691481.000000 s hg38.chr19_GL949753v2_alt 640726 288 + 796479 GAGGTAAGTCAAACAGAGAGGCATTGATTGGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtagaagcctttgg------ttttgtttttttt----aaggcagagtttcactcttgttgccaaggctgga s panTro4.chr19 59848632 292 + 63644993 GAGGTAAGTCAAACAGAGAGGCATTGATTAGCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGCAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAACTGGGGGAGGGAATCTTGTAAATAAGATACtgagctagtgagaaagtagaatgatttatggctcataacttacacgaggatccccca-----taaggccctgtaggccactgtaaaagccttTGA------ttttgttttttttttttaaggcagagtttcactcttgttgccaaggctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56759370 281 + 60714840 GAGGTAAGTCAAACACAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAAGAAACTGAAGGATGGTAGATCATGAACCAGCATGCTAATTGGGGGAAGGAATCTTGTAAATAAAATACtgagctagtgagaaagtagaatgattt-tggctcataacttataagaggat--ccca-----taaggccctgtaggccactgtaaaagcctttgg------Atttttttttttt----aaggcagagtttcactcttgttgccaaggctgga i ponAbe2.chr19 C 0 M 381 s nomLeu3.chr10 103294810 282 - 106955855 GAGGTAAGTCAACCAGAGAGGCATTG----GCTAGACTTATGCTGGTCATTTAAGTCCTCTT-------------------TTGGAAAGTGATATGAGGAAACAAACTGAAGGATGGTAGATCATGAACCAGCATGCAAATAGGGGAAAGGAATCTTGTCAATAAAATACTGAGCTAGTGAAAAAGTAGAATGATTT-TGGCTCATAACTTATAAGAGGAT--CCCA-----TAAGGATCTGTAGACCACTGTAAAAGCCTTCGA------ttttttttttttt---taagacagaggttagctcttgttgccaaggctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60585960 276 + 64156825 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCATGAACCAGCTTGCTAATTGAGAGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacgag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt----aagac--agtttcgctcttgttgcccaggctgga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55724966 295 + 59248254 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGGTCATTTAAGTTCTCTCTGGGAAATCTTGTTCTCTTTGGGAAAGTGATAGGAGGAAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGAGGGAAGGAATCTTGTCAATAAAATACtgagctagtaagaaagtagaatgattt-tggctcataactgataagacaag--acca-----taaggccctgtaggccactgtaaaagccttagA---------tttttttttt----aagac--agtttcgctcttgttgcccaggctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827345 277 + 51301725 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCAGTCATTTAAGTTCTCTC-------------------TGGGAAAGTGATATGAGGGAAAAAACTGAAGGATGTTAGATCGTGAACCAGCTTGCTAATTGGGGGAAGGAATCttgtaaataaaatactgagCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGGTAAGACGAG--ACCA-----TAAGGCCCTGTAGGCCACTGTAAAagccttaga--------ttttttttttt----aagac--agtttcgctcttattgcccaggctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540543 278 + 50890351 GAGGTAAGTCAACCAGAGAGGCACTG----GCTAGATTTATGCCGCTGATTTaagttctctc-------------------tgggaaagtgatatgagggaaaaaactgaaggatgttagatcgtgaaccagcttgctaattgggggaagGAATCTTGTAAATAAAATACTGAGCTAGTGAGAAAGTAGAATGATTT-TGGCTCATAACTGATAAGACAAG--ACCA------------CTGTAGGCCACTGTAAAAGCCTTTGAttttttttttttttttttt----aagac--agtttcgctcttgttgcccaggctgga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893006 243 + 49145316 GAGGTAAGTCAACCAGGGCAGCATTG----GCTAGATTTATGCTGGTCATTCAAGTCCTCTT-------------------TGGGAAAGTGATATGAGGAAAAAAACTGAAGAATGGTAGATCATGAACCA----GCTAATCTGGGGAAGGAATTTTGCTAATCAAATACtgagctagtgagaaagtagaataagtt-tggctcataacttacaagaagat--ctcataatgtaaggccctataggccactgtaaaagcctttaa------attttTTT------------------------------------------- i calJac3.chr22 I 29 C 0 e canFam3.chr1 20009326 1851 - 122678785 I a score=106621.000000 s hg38.chr19_GL949753v2_alt 641014 61 + 796479 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct s panTro4.chr19 59848924 61 + 63644993 gtgcaatggcgtgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103295092 61 - 106955855 gtgcaatggcaccatctcggctcactgcaacctctgcctcccaggttcaagtgattctcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586236 61 + 64156825 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725261 61 + 59248254 gtgcaatgacgtgatctcagctcactgcaacttctgcctcccaggttcaaatgattctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827622 61 + 51301725 gtgcaatgacatgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540821 61 + 50890351 gtgcaatgacgtgatctcggctcactgcaacttccgcctcccaggttcaagtgattctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893249 24 + 49145316 --------------------------------tccacctctt--gttcaagcaattct--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e ponAbe2.chr19 56759651 381 + 60714840 M a score=895896.000000 s hg38.chr19_GL949753v2_alt 641075 342 + 796479 gccccagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----GTTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTATCACGGTCTGGCTTGAGGCTTGAAATATTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac s panTro4.chr19 59848985 342 + 63644993 gcctcagcctcccgagaatctaggattacagTCATAGCTGA---GATTACAGGAACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCC----ATTTGCATTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGGGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------tgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggctaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcacgcctgtaatcccaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760032 346 + 60714840 GCCCCAGCCTCCCGAGAATCTAGGATTACAGGCATAGCTGA---GATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATA--AAGGTGTCACGGTCTGGCTTGAGGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaatggtggctcatgcc--------cataatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagtctggccaacatggtgaaaccccgtctttactaaaaatgcaaaaattagctgggtatggtggtgcacacctgtaatcccagc i ponAbe2.chr19 M 381 C 0 s nomLeu3.chr10 103295153 357 - 106955855 gccccagcctcctgagaatctaggattacaggcATAGCTGGGATGATTACAGGCACAAG-----------------------------------------------------------------------ACACCAGGTAATCCACCCCTTTATTTGCACTGAGCTTTTGAGTGTTTGGAAATA--AAGGTGTCACAGTCTGGCTTGAAGCTTGAAATGTTCGTCAGGGTGATGGGTTAAG-------AAACTTCAGGAggccaggaacggtggctcatgcctacacgattacaatcccagcattttgggaggctgaggcaggtggatcgcttgaggtcaggagtttgagaccagtctggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggtatggtggtgcatgcctgtaatgccaac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586297 329 + 64156825 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------cca-cAGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAATTTCAGGAggacaggaacagtggctcatgcc--------tgtaatctcagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttggagaccagcccggccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatgatggtgcacccctgtaatcctagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725322 330 + 59248254 gccccagcctccgcagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCATGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGGACAGGAAcagtggctcatgcc--------tgtaatcccagtactttgagaggctgaggcagggggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47827683 330 + 51301725 gccccagcctccggagaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaggTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGTGATGGGTTAAG-------AAACTTCAGGAGgacaggaacagtggctcatgcc--------tgtaatcccagtactttgggaagctgaggcaggtggatcacttgaggtcaggagttgcagaccagccccgccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47540882 330 + 50890351 gccccagcctccggaaaatctag---------------------gattacaggcacaag-----------------------------------------------------------------------ccaccaGGTGATCCACTCCTTTATTTGCACTGAGCTTTTGAGTCTTTGGAAATAGTAAGGTGTCACGGTCTGGCTTGCAGCTTGAAATGTTCCTCAGGGCGATGAGTTAAG-------AAACTTCAGGAggacaggaacagtggctcttgcc--------tgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttggagaccagcccagccaacatggtgaaacctggtctctactaaaaatacaaaaattagctgggcatggtggtgcacccctgtaatcctagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893273 406 + 49145316 gccccagcctcctgagtagctga---------------------gattacagacgcgagctaccacacacagctaatttttgtgttttcagtagagacggggtttcgccatgttggtctggaacccctgaccctcaggtgatccatccCTTTATGTGCACTAAGCTTTTGAGCCTTTGGAACAA--AAGGTGTCATGGTCTGACTTGCCGTTTAGAACGTTCCTCAGGGTGATGGGAGAAGTTTCTTAAAACTTCAGGAggtcaggaatggcggcttatgcc--------tgcaatgccagcactttgggaaggcgaggcttgtggatcacttgaggtcaggaatttgagaccagcctggccaacatggtgaaaccaggtctgtattaaaaatacaaaaagtggccgggcacaatggctcaagcctgtaatcccagc i calJac3.chr22 C 0 I 278 e canFam3.chr1 20009326 1851 - 122678785 I a score=270628.000000 s hg38.chr19_GL949753v2_alt 641417 113 + 796479 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacaaagcgagactctgtctgaaaaa s panTro4.chr19 59849327 113 + 63644993 tactcagctcaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcgcaccactgcactccagcctgggtgacagagcgagactctgtctgaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760378 113 + 60714840 tactcagctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatcacaccactgcactccagcctgggtgacagagtgagactctgtctgaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295510 117 - 106955855 tgcttggctgaatcaggagaatcgcttgaaccttggaggctgaggttgcagtgagccaagcaagatggcatcactgcactccagcctgggtaacagagcgagactctgtctgaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586626 113 + 64156825 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagacttcgtctcaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725652 113 + 59248254 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828013 113 + 51301725 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagcgagactccgtctcaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541212 113 + 50890351 tacttagctgaggcaggagaatcgcttgaaccttggaggctgaggttgcagtgagc----caagatggcaccactgcactccagtctgggtgacagagtgagactccgtctcaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20009326 1851 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=899236.000000 s hg38.chr19_GL949753v2_alt 641530 373 + 796479 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTACTCTACAGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTTGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATATATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG s panTro4.chr19 59849440 373 + 63644993 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTTACTCTACAGCAAAGCTAAGTAGTAATG-AC---GTGCAGATTCTCTTTGCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTCCATTTTCT--GGGGGTGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCTGATTACTGGATCCCAGCAGAAGCAGC-ATGCTGCTGAAGTCCAGGTCACTGGGGGCCATTGTTATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTAGAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760491 378 + 60714840 agaaaaaaaGTACCCTGTGTTCTAGTGTTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ACATTATGCAGATTCTCTTCGCATTAGGATCGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAACTGAC--AAACTTGGGGGAGAGAAGTGATAAA-----GAGCTCACCATTCCATTTGTGGAGACTTTGCATTTCCTGGGGGGGGGGTATCCCACCTATGGTTCCCTGGGTTTATGAGGTGGGGCAGGCTCACTGCTTCCCGATTACTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGTCCAGGTCACTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTGACTTTGGAAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103295627 376 - 106955855 acaaaaaaaGTACCCTGTGTTCTAGTGGTTTTTTTCTTGTCTCTACAGCAAAGCTAAGTAGTAATG-ATATTATGCAGATTCTCTTCACATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAGAGATGCAATTGAC--AAAGTTGGGGGAGAGAAGTGATGAA-----GAGCTCGCCATTCCATTTGTGGAGACTTTGCATTTCCT--GGGGGTGGTATCCCACCTGTGGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACTGCTTCCTGATTCCTGGATCCCAGCAGAAGCAGC-ATGTTGCTGAAGCCCAGGTCCCTGGGGGCCATTCTCATCTATATTTCACTTCTCCAGG---CCCTCTACCTTACTTTGGAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60586739 372 + 64156825 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAATAATG-ACATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACCGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCT-GGTTTATGAGCTGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCCATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CTCTCTACATGACTTTGGAAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55725765 374 + 59248254 ag-aaaaaaGTACCCTGTGTTCTGGTG-TTTTTTTCTTGTCTTTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGGTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGAAGTGATAAA-----CAGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCAcggcttcctgattactggatcccagcagaagcagccatgttcctgaagtccaggtcactgggggccATTCTCACC--TATTTCACTTCTCCAGGCCCCCCTCCACATGACTTTGGAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828126 365 + 51301725 agaaaaaaagtacccTGTGTTCTcgtgttttttttcttgtctctacAGCGAAGCTAAGTAGTAATG-ACACGATGCAGATTATCTTCTCATTAGGATTGCAGATTCTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTGAC--AAGCTTCGGAGAGAGA---------------AGCTCACTGTTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCCATCTCCAGTTCCCTGGGTTTATGAGCGGGGGCAGGCTCACGGCTTCCTGATTACTGGATCCCAGCAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACCTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541325 374 + 50890351 agaaaacaaGTACCCTGTGTTCTCGTG-TTTTTTTCTTATCTCTACAGCAAAGCTAAGTAGTAATG-TCATGATGCAGATTCTCTTCTCATTAGGATTGCAGATTGTAGTTGGAAAATAGGTTGCATCCAAG-GATGCAACTTAC--AAACTTCGGAGAGAGAAGTCATAAA-----CAGCTCATTATTCCATTTGTGGAGGCTTTGCATTTCCT---GGGGTGGTATCCTATCTCCAGTTCCCTGGGTTTATGAGCTGGGGCAGGCTCACAGCTTCCTGATTACTGGATCCCAGGAGAAGCAGCAATGTTCCTGAAGTCCAGGTCACTGGGGGCCATTCTCACCTATATTTCACTTCTCCAGG---CCCTCTACATGACTTTGGAAGTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20011177 370 - 122678785 AAAACAGAAACACCATACAttttgatg--ttctttctcatttctaca---aggctaggaaagcatgtacatgacccagattcagtttgcattag-------ggttttagttgtaaagcatgttgcatcaataagatgcatttaatggaggcttgtgaaggagaagtgatgtacagcccaGCCCACCATCCCATTGATGGAGCCACTGCATTTCAA--AGGGGCAATATTC-GTCCACAGTCCCCTGGGCAC-CAAGCTGGGGAAGTCTCTGTGTGCCCTGCTCACTAGATCCCAGTAGAAGCAGT-GTTCTCCTGAAGCCTACTCTGCTAGAGGCCATCCCCATCTGTATCCCACTCCTCCAGG---CCCTCAGAATAACCCtgaaagtg i canFam3.chr1 I 1851 I 236 e calJac3.chr22 45893679 278 + 49145316 I a score=798474.000000 s hg38.chr19_GL949753v2_alt 641903 390 + 796479 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGATCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccgggcgtggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccc-atctctactaaaaatacaaaaaaaattagccaggcacggtggcgggcatctgtagtcccagctactcaggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtaagccgagatcgcgccactgcactccagcctgggcaactagaacgaggctccgtctc----a-------aaaaaaaaaaaaaaaa s panTro4.chr19 59849813 388 + 63644993 CCCACCCACATATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCGAAGTGATACAGTCTGAGATATTGAAAACATAGAAATTggccaggcgtggtggctcacgcctgtaatcccagcactttggaaggccaaggcgggcagatca--tgaggtcaggagattgagaccatcctggctaacactgtgaaaccccatctctactaaaaatacaaaaaaaattagccaggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcacgccactgcactccagcctgggcaactagaacgaggctccgtctc----a-------aaacaaaaaaaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56760869 384 + 60714840 CCCACCCACCTGTATTCAGTTTCTGGAGGGGTTTACTCTTAAAACTGCATCCAAAGTGAT--AGTCTGAGATACTGAAAACATAGAAATTggccgggcgtggtggcccacgcctgtaatcccagcactttgggaggccgaggcaggcagatca--tgaggtcaggagatcgagaccatcctggctaacactgtgaaaccccatctcttctaaaaatacaaaaaaaattagccgggcatggtggcgggcgtctgtagtcccagctactcgggaggctgaggcaggagaatagcgagaacccgggaggaagaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaactagagcgaggctccatctc----a-------aaaaaaataaa----- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296003 351 - 106955855 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTGAAACTGCATTCA--------------------------------------gctgggcgtggtggctcatgcctataatcccagcactttgggaggctgaagcaggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggggaaaccccgtctctactaaaaatac----agaattagccgggcatggtggcacatgcctgtaatcccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcggtgagccgagatcgtgccattgcactccagcctgggcaacaaaagtgaaactccttctc----a-------aaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 I 302 s rheMac3.chr19 60587111 392 + 64156825 ACCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatctcttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtcaaataaataaataaataaata------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726139 388 + 59248254 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATACTGAAAACATAGAAATTgaccgggcgtggtggctcacgcctgtaatctcagcactttgggaggccaagacaggcggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatgtc----aaaaaaataaataaata------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828491 380 + 51301725 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATACAGTCTGAGATATtgaaaacatagaaattgaccgggtgcagtggcttacacctgtaattccagcactttgggaggccgagacaggcggatca--tgaggtcaggagatcaacaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcatctgtagtccaagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgac-agagcgagactccatatc------------aaataaata------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47541699 382 + 50890351 CCCACCCACCTATATTCAGTTTCTGGAGGGGTTTGCTCTTAAAACTGGATCCAAAGTGATGCAGTCTGAGATAGTGAAAACATAGAAATTgaccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatca--tgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatac--aaaaaattaactgggtgtggtggcgggcatctatagtcccagctacccaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagatcacgccattgcactccagcctgggcaactagagcgagactctgtgtc----a-------aaaaaaaaa------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=292195.000000 s hg38.chr19_GL949753v2_alt 642293 131 + 796479 aagaaaaCATAGAAATTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt s panTro4.chr19 59850201 129 + 63644993 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcacgcctgtaatcctagcacactgggaggctgaggtgggaggattccttgagcaccagaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761253 129 + 60714840 --gaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaggtgggaggattccttgagcaccagaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296656 131 - 106955855 aagaaaacatagaaaTTAAGGATTTCCAGATTTCCAAACACTTTAAAAATGAggccaggcatgatggctcatgcctgtaatcctagcacgttgggaggccgaggtgggaggattctttgagcaccagagtt i nomLeu3.chr10 I 302 C 0 s rheMac3.chr19 60587503 129 + 64156825 --aataaaACAGAAATTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726527 129 + 59248254 --aataaaacagaaaTTAAGGATTTCCAGATTTTGAAAAACTTTAAAAACGAggccgggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggattccttgagtctccgagtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828871 128 + 51301725 --aataaaacagaaattaaggATTTCCAGattttgaaaaactttaaaaacgaggccaggcgtgatggctcatgcctgtaatcctagcacgttgggaggccgaagtgggaggatt-cttGAGTCTccgagtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542081 129 + 50890351 --aagaaaacaaaaaTTAAGGATTTCCAGATTTCAAAAAACTTTAAAAACGAggccaggcatgatggctcatgcctgtaatcctagcacattgggaggccgaagtgggaggattccttgagtctccgagtt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20011547 236 - 122678785 I e calJac3.chr22 45893679 278 + 49145316 I a score=577089.000000 s hg38.chr19_GL949753v2_alt 642424 214 + 796479 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactcaggaggctgaggtgggagaaccgatcaagcctggaagaccgaagccgcagtgagccgtaatca--------ccccactgcactccaggctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag s panTro4.chr19 59850330 214 + 63644993 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttacctggccatggtaatacatgcctgtagagccagctactctggaggctgagttgggaggcccgatcaagcctggaagaccgaagccgcagtgagccgtaatca--------ccccactgcactccaccctgggggacagagcaagaccctgtctc--------------aaaaaaagaaagaaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761382 214 + 60714840 caaaaccagcccgggaaagatgac--aagacctcatctctacagaaaacagttagctggccatggtaatacatgcctgtagacccagctactcaggaggctgaggtgggaggaccaatcaagcctggaagagtgaagccgcagtgagctgtgatca--------ccccactgcgctccagcctgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103296787 214 - 106955855 caaaaccagcccgggaaagatgac--aagaccccatctctacagaaaacagttagctggccatggtaacacatgcctgtagacccagctgctcaggaggctgaggtgggagggccgaacaagcccggaagactgaagccacagtgagccgtgatca--------ccccactgcactccagcttgggggacagagcaagaccctgtctc--------------aaagaaagaaaggaag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587632 224 + 64156825 caaaaccagcctggaaaagatgac--aagacctcttctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccaatcaagcatggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc----aaaaaaaaaaaaaaaaagaaagaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55726656 222 + 59248254 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagtctggaagactgaagccgcagtgagccgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc------aaaaaaaaaaaaaaagaaagaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47828999 225 + 51301725 caaaaccagcctggaaaagatgac--aagacctcatctctacagaaaaaagttAGCTGGCCATGGtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggactgatcAAGCCTGGAAGACTGaagccgcagtgagctgtgatca--------caccactgcactccagcctgggggacggagcaagaccctgtctc---aaaaaaaaaaaaaaaaaggaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542210 207 + 50890351 caaaaccagcctggaaaaga-------------------------------ttagctggccatggtaatacatgcctgtagtcccagctactcaggaggctgaggtgggaggaccgatcaagcctggaagactgaagccacagtgagccgtgatcacaccactgcaccactgcactccagcctgggggacagagcaagatcctgtctcaaaaaaaaaaaaaaaaaaaaagaaagaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45893957 205 + 49145316 caaaaccaacctgggaaagatgatcagagacctcatctctacacaaaaatgttagctggccatggtaatccatacctatagtcccagctactcaggaagctgaggtgggaagacccattaagcctggaaggttgaagctgcagtgagtcgtgatca--------caccacagtgccccagcctggggaacagagcaagaccctatctc-------------------------gaaaa i calJac3.chr22 I 278 C 0 e canFam3.chr1 20011547 236 - 122678785 I a score=918616.000000 s hg38.chr19_GL949753v2_alt 642638 277 + 796479 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAATGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGATACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC s panTro4.chr19 59850544 277 + 63644993 aagaaaaagaaaaTCGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGACACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTACAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACACCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761596 277 + 60714840 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGGAGCGCCTCTGAGATATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297001 273 - 106955855 ----aaaagaaaaTCGTCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTGTGTGAGGCCGCAGGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCAAGCTTGGTTATGCTGCATTGCTGTAACCTGCGGGATAATCAAAGGAAGAGAAGCCTGTTATCCCTCTGGCTAACGCCCTGTGAAGCA---GTTATTTCCAACACTATATACCTTCCAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60587856 276 + 64156825 aaGAAAAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i rheMac3.chr19 C 0 I 703 s macFas5.chr19 55726878 276 + 59248254 aagaaaAAGGAAATTGCCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAAGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTA-CCGTCTGGCTAATGCCCTGTGACGTA---GTTATTTCCAGCACTGTATACCTTCCAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829224 277 + 51301725 aagaaaaaggaaatcgcCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCAGGCTTCTTGCAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGCAACCTGCAGGATAATCAAAGGAGGAGAAGCCTGTTATCCCTCTGGCTAATGCCCTGTGATGTA---GTTATTTCCAGCACTGTATACCTTCCAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47542417 274 + 50890351 aagaaaaagaaaaTCACCTACCGTAGGTGTTTTAGGTTACAGTTTGGATTCTCTAACGCCTGACAGAGAATCCACAATCCACGAGCTATCTGGTTGAGACTCAAGTCCAGGTTTGTGAGGCTGCACGCTTCTTGGAGTGCCTCTGAGAGATATCTACAGCCACGCTTGGTTATGCTGCATTGCTGTAACCTGCAGGATAATCAAAGGAAGAGAAGCCTGTTATCCGTCTGCCTAATGCCCTGTGAC------GTTATTTCCAGCACTGTATACCTTCCAC i chlSab2.chr6 C 0 I 3 s calJac3.chr22 45894162 280 + 49145316 agagaaaaaaaaGTCACCTACCGTAAGTGTTTTAGGTTACAGTCTGGATTCTCTAACGCCTTGCAGAGAATCCACAATCCACACCCTATGTGGTTGAGGCTCAAGTCCAAGTCTGTGAGGCTGCAGACTCCTTGGAGAACCTTCGAGATAGGTCTGCAGCCACGCTTGGTTATGTTGCATTGCTGTAACCTGCAGGATCATCACATGAAGAGAGGCCTGTTATCCCTCGGACTTATGCCCTGCGAAGTGGCTGTCACTCCCAGCACCATATATCTTCCGC i calJac3.chr22 C 0 I 3 s canFam3.chr1 20011783 263 - 122678785 AAAATGAGCAAAAGTACCTACCCTAGACATCTTAGGTTACAATTTGGCTTCTTCAAGGCCTTGCAGAGAAACCATGATCTGGTACCTATAGGATTGAGACCCAGATCCAAGTTTGTTATGCTGGAATCTTCTTTAAGAAGCTTTAAGATGTGTCTGTAGACACATCTGGTTATGTTGCAGTGTGATAATCTGCA-------------AAGACAATCCCGTTC-ATCTCTGGCTTACACCCTGTAAGATG---GTTACTTCCAACAGCACACACCTTCTAC i canFam3.chr1 I 236 C 0 a score=294.000000 s hg38.chr19_GL949753v2_alt 642915 1 + 796479 T s panTro4.chr19 59850821 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761873 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297274 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727154 1 + 59248254 C i macFas5.chr19 C 0 C 0 s canFam3.chr1 20012046 1 - 122678785 T i canFam3.chr1 C 0 I 23589 e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 642916 1 + 796479 T s panTro4.chr19 59850822 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761874 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297275 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727155 1 + 59248254 T i macFas5.chr19 C 0 I 1 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e rheMac3.chr19 60588132 703 + 64156825 I a score=63774.000000 s hg38.chr19_GL949753v2_alt 642917 118 + 796479 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA s panTro4.chr19 59850823 118 + 63644993 ATATActggaatgcagtgctgcactcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgcccgccaccTATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761875 118 + 60714840 ATATActggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgagatgatagttgcctgccaccTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297276 118 - 106955855 ATATAccggaatgcagtgctgcaatcttggctcactgcaacctctgcctcccaggttcaagcgattcttctgcctcagcctcccaagtagctgggattataggtgactgccaccTATA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e papAnu2.chr19 47829501 0 + 51301725 C e macFas5.chr19 55727156 1 + 59248254 I e rheMac3.chr19 60588132 703 + 64156825 I a score=251041.000000 s hg38.chr19_GL949753v2_alt 643035 218 + 796479 taaccagacttggtggtgcacgcctgtagtgccagctac-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcccgggcgacagagcgagactccgtctcaagaaaacaacaa--------caaca-acaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA s panTro4.chr19 59850941 218 + 63644993 taaccagacttggtggtgcgcgcctgtagtgccagctac-tcagaagactgaggcaggagaatcgcttgaatccgggaggcagaggctgcagtgagctgagatcgtgccatggcactccagcccgggcgacagagcgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATATAAAACATAGGTGGCAGGTAGGAATTGACCCATGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56761993 214 + 60714840 taaccaggcttggtggtgcacgcctgtaataccagctac-tcagaaggctgaggcaggagaatcgcttgaatctgggaggcagaggctgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagcaagactccgtctcaagaaaa----aa--------caaca-acaaaaaGTATTTATAAAAAACACAGGTGGCAGGTAGGAATTGACCCATGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297394 218 - 106955855 taaccaggcttggtggcgcgcacctgtagtaccagctac-tcagaaggctgaggcaggacaatcgcttgaatccaggaggcagaggctgcagtaagctgagatcacgccactgcactccagccggggcgacagagtgagactccgtctcaagaaaaaaacaa--------caaca-aaaaaaaGTATTTATAAAAAACATAGGTGGCAGGCAGCAATTGACCCATGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3519994 225 - 59248254 taaccaggcttggtggtgcgtgcctgtagtaccagctac-tcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccaacctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaaCTCAACCAAAAAACCTTATTTATA-AAAACATAGGTGGCAGGTTGGAATTGACCCATGAA i macFas5.chr19 n 1 C 0 s papAnu2.chr19 3470877 224 - 51301725 taaccaggcttggttgTGCgtgtctgtagtaccagctacttcagaaggctgaggtaggagaatcgcttgaatcc-ggaggcagaggctgcagtgagctgagatcgcaccaccgcactccagcctgggcaacagagcgagactccgtctcaagaaaaaaataaaaaaaactcaaCC-AAAAACCTTATTTAT--AAAACCTAGGTAGCAGGTTGGAATTGACCCATGAA i papAnu2.chr19 n 0 T 54731 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=-1182.000000 s hg38.chr19_GL949753v2_alt 643253 3 + 796479 -CTG s panTro4.chr19 59851159 3 + 63644993 -CTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762207 3 + 60714840 -CTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103297612 3 - 106955855 -CTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3520219 2 - 59248254 -TT- i macFas5.chr19 C 0 T 51553 s papAnu2.chr19 47829501 3 + 51301725 CTT- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e calJac3.chr22 45894442 3 + 49145316 I e chlSab2.chr6 47542691 3 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=372757.000000 s hg38.chr19_GL949753v2_alt 643256 180 + 796479 GAGCTATATACTTCCAGGTGGGCTTGCACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatc s panTro4.chr19 59851162 180 + 63644993 GAGCTATATACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGgaccgggcacagtggctcatgcctataatcacagca--gtgggaggccaagacgggcagatcatttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56762210 179 + 60714840 GAGCTATACATTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcacgcctataatcacagca--gtgggaggccaagatgggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaaaccccatctctact-------aaaaatacaaaaatC i ponAbe2.chr19 C 0 I 1170 s nomLeu3.chr10 103297615 180 - 106955855 GAGCTATATACTTCCAGGTGGACCTGTACAT-AAAAGCATGCAAATGggccgggcacagtggctcacgcctataatcacagca--gtgggaggccaagacgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctact------aaaaaatacaaaaatc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727157 186 + 59248254 GAGCTGTCTACTTGCAGGTGGGCTTGTACATAAAAAGCATGCAAAT-ggcccagtgcagtggctcatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaatacaaaaata i macFas5.chr19 I 1 I 8 s papAnu2.chr19 47829504 182 + 51301725 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAaat-ggcccagtgcagtggcttatgcctataatcccagca--gtgggaggccgagacgggtagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaat-ccatctttacttaaaaaaaaaaaaaaaaaaa-- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47542694 180 + 50890351 GAGCTATCTACTTCCAGGTGGGCTTGTACAT-AAAAGCATGCAAATGggcccagcacagtggctcatgcctataatcccagca--gtgggaggccga---ggtcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatttctacttaaaaaaaaaaa---aaaaata i chlSab2.chr6 I 3 I 8 s calJac3.chr22 45894445 179 + 49145316 GAGCTATATACTTCCAGGCGGGCTTGCACAT-TAAAGCATGCGAATGggccaggcgcggtggctcatgcctgtaatcccagcactgtgggaggcagagaggggcagatcacttga-gtcagtagttcaagaccagcctggccaacatggtgaaacctcgtctctacc-------aaaaatacaaaaat- i calJac3.chr22 I 3 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e rheMac3.chr19 60588132 703 + 64156825 I a score=66477.000000 s hg38.chr19_GL949753v2_alt 643436 46 + 796479 gggccgggcgcggtggctcaaacctgtaatctcagcactttgggag s panTro4.chr19 59851342 46 + 63644993 Gggccaggcgcggtggctcaaacctgtaatctcagcactttgggag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297795 46 - 106955855 gggccgggcgcactggctcaagcctgtaatctcagcacttacgcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727351 46 + 59248254 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i macFas5.chr19 I 8 C 0 s papAnu2.chr19 47829689 46 + 51301725 ggtccagacacagtggctcaagcctgtaatcccagcgctttgggag i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47542882 46 + 50890351 ggtccagacacagtggctcaagcctgtaatcccagcactttgggag i chlSab2.chr6 I 8 I 298 s calJac3.chr22 45894624 46 + 49145316 gagccgggcatggtggcgcgtgcctgtaatcccagctactcaggag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=15286.000000 s hg38.chr19_GL949753v2_alt 643482 19 + 796479 accaaggtgggtgaatcac s panTro4.chr19 59851388 19 + 63644993 accaaggtgggtgaatcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297841 19 - 106955855 accaaggtgggtgaatcac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727397 19 + 59248254 gctgagacaggcagatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829735 19 + 51301725 gctgaggcaggcagatcac i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45894670 19 + 49145316 gctgaagcaggagaattgc i calJac3.chr22 C 0 I 521 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46618.000000 s hg38.chr19_GL949753v2_alt 643501 67 + 796479 --Aagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt s panTro4.chr19 59851407 67 + 63644993 --gagatcaggagttcaagaccagcctggccaaagtggtgaaaccccatctttactaaataca-aaaatt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297860 67 - 106955855 --gagatcaggagttcaagaccagcctggccaaagtggtgagaccccatctttactaaataca-aaaatt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727416 70 + 59248254 ctgaggtcgggagttcgagaccagcctgaccgacatggagaaattccgtctccactaaaaatacaaaatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47829754 70 + 51301725 ctgaggtcgggagttcaagaccagcctgaccgacatggagaaattccgtatctactaaaaatacaaaatt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e rheMac3.chr19 60588132 703 + 64156825 I a score=46885.000000 s hg38.chr19_GL949753v2_alt 643568 146 + 796479 agctgggcacgatggctcacacctgtaatctcagcactttgggaggctgaggcagacagatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccaggtgtggt s panTro4.chr19 59851474 146 + 63644993 agctgggcacgatggctcacacctctaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcaaga-------------------------------ccagcctaagcaatatg-gagaaa-cccatctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103297927 147 - 106955855 agctgggcacaatggctcacacctgtaatctcagcactttgggaggctgaggcagatggatcacctgaggtcgggagttcgaga-------------------------------ccagcctaagcaacatg-gagaaaccccgtctctactaaaa------------------------------------------------------------------atac---aaaattagccgggtgtggt i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47829824 248 + 51301725 agctgggtgtggtggcccatgcctgtaatcccagctactcgggggtctgaggcaagagaattgcttgaacttgggagatgaaggttgcggtaagcagagatcgcgccattgcactccagcctgggcaccaagagtgaaattctgtttcaaaaaaaaaaaaaaaaaaatatatatatatatatatatacacacacacacacacacagagacacacatatacatatacacaaaaattagccgggtgtggt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=32208.000000 s hg38.chr19_GL949753v2_alt 643714 144 + 796479 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgtggtgagcagagattgcaccattgcactccagcctgggcaaga---gcgaaactccatctcaaaaaaaaaaaa s panTro4.chr19 59851620 147 + 63644993 ggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaactggggagacggaggttgcagtgagcagagattgcaccattgcactccagcctgggcaagaagagcgaaactccatctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47830072 144 + 51301725 ggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcctgggtgaca---gtgagactccatgcaaaaaaaaaaaaa i papAnu2.chr19 C 0 T 165 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=1719.000000 s hg38.chr19_GL949753v2_alt 643858 18 + 796479 aaattagccaggtgtggc s panTro4.chr19 59851767 18 + 63644993 aaattagccaggtgtggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e nomLeu3.chr10 103298074 0 - 106955855 C e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=76880.000000 s hg38.chr19_GL949753v2_alt 643876 302 + 796479 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactg---ttaaaaaaaaaaaaaaaa--CATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT s panTro4.chr19 59851785 307 + 63644993 ggcccatgcctgtaatcctagctactcaggaggctgacgtaggag----aattacttgaacccaggaagcggaggttgcagtgagccaagatcgcaccactgcactccagcctggtgacagagagagactcagtttaaaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTCCATCCATTTCCAGCTCTGCCTGGGACaacagcttaggctctgggttcagaccgacccaggacaggatctgagccctgggtcacttattttctgcgtgGTTAGATTATGGAAATTTCACTTTCCCTGTCATTTTAT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298074 308 - 106955855 ggcccatgcctgtaatcctagctactcaggaggctgaggtaggagaattaattacttgaacccaggaagcagaggctgcagtgagccaagatcacaccactgcactccagcctggtgacagagagactcag---ttagaaaaaaaaaaaaaaaTCATCCAAATGGCCTTCTGATTACATCCATTTCCAGCTCTGCCTGGGACAATATCTTAGGCTCTGGGTTTAGACCGACCCAGGACAGGATCTGAGACCTGGATCAGTTATTTTCTGCACGGTTAGATTATGGAAATTTCACTTCCCTTGTCATTTTAT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e calJac3.chr22 45894689 521 + 49145316 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=49139.000000 s hg38.chr19_GL949753v2_alt 644178 128 + 796479 TTCATGTTTAAGttttgtctttaactgacacattctacatatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataacgatcaGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA s panTro4.chr19 59852092 128 + 63644993 TTCATGTTTAAGttttgtctttaactgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------ttcgtataatgatcGGGTAGGTGACTGTT--------------------TGTTTAACAATAGTTATTCTA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298382 124 - 106955855 TTCACGTTTAGGttttgtctttaattgacacattctacgtatataggggtatagtgtgatgttttggtgcaggta--------cac------atcatataacaatcaGGCAGGTGAC------------------------TGTTTAACAATAGTTATTCTA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45895210 158 + 49145316 TTCATGTTTAGGttttgtctttaaatgacacattctatatatttcggagcacagtgtgatgtttcggtgcacgtatcatgtatcacctgataattgtataattatcaagtaagTGACTTTTTTTTCTTTTTTTTTGTTTGCTGTTTAACAA----TACTCTA i calJac3.chr22 I 521 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e macFas5.chr19 55727486 0 + 59248254 C e rheMac3.chr19 60588132 703 + 64156825 I a score=73418.000000 s hg38.chr19_GL949753v2_alt 644306 127 + 796479 Agccaggcacagtggctcatgcctggaacgccagcactttgggaggccgaggcaggcagatcacttaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctccactaaaagtg s panTro4.chr19 59852220 126 + 63644993 Agccaggcacagtggctcatgcctg-aacgccagcactttgggaggccgaggcaggcagatcacctaaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaacctcatctctactaaaagtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298506 127 - 106955855 Agccaggcacagtggctcatgcctggaaccccagcactttgggaggccgaggcagacagaacacctgaggccaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccccatctctactaaaagta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727486 159 + 59248254 agctgggtgtggtggcccatgcctgtaatcccagctcctcgggggtctgaggcaggtgaatcacttgaacttgggagacgaaggttgcggtaagcagagattgcgccattgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaaaaaa i macFas5.chr19 C 0 I 69 s calJac3.chr22 45895368 126 + 49145316 Agcggggcgtggtggctcacgcctgtaatcccagcactttgggtggccgaggcaggtggatcacataaggtcaggagtttgaga-------------------------------ccagcctggccagtatg-gtgaaacttcatctctactaaagta- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e chlSab2.chr6 47542928 298 + 50890351 I e papAnu2.chr19 47830216 165 + 51301725 T e rheMac3.chr19 60588132 703 + 64156825 I a score=211373.000000 s hg38.chr19_GL949753v2_alt 644433 129 + 796479 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc s panTro4.chr19 59852346 130 + 63644993 caaaaattagccggggcatggtggagagcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaagttgcagtcagccaagattacaccactgcattccagtc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298633 129 - 106955855 caaaaattagccagg-catggtggagggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcggtgagccgagattacaccactgcactccagtc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55727714 129 + 59248254 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i macFas5.chr19 I 69 C 0 s papAnu2.chr19 47830051 129 + 51301725 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagattgcaccactgcattccagcc i papAnu2.chr19 T 165 C 0 s chlSab2.chr6 47543226 129 + 50890351 caaaaattagccggg-tgtggtggtgcacgcctgtaatcctagctactcaggaggctgaggtaggagaattacttgaacccaggaaccagaggttgcagtgagccaagatcacaccactgcattccagcc i chlSab2.chr6 I 298 C 0 s calJac3.chr22 45895494 129 + 49145316 caaaaattagctggg-cgtggcggcaggcacctagaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagattgcaccactgcattccagcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I e rheMac3.chr19 60588132 703 + 64156825 I a score=43594.000000 s hg38.chr19_GL949753v2_alt 644562 25 + 796479 tgggcgacagagtgagacttcatcc s panTro4.chr19 59852476 25 + 63644993 tgggcgacagagtgagacttcatcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298762 25 - 106955855 tgggcgacagagtgagacttcatcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588835 25 + 64156825 tgggggacagggtgagactccgtcc i rheMac3.chr19 I 703 C 0 s macFas5.chr19 55727843 25 + 59248254 tgggtgacagagtgagactccatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830180 23 + 51301725 tgggtgaca--gtgagactccatgc i papAnu2.chr19 C 0 I 256 s chlSab2.chr6 47543355 25 + 50890351 tgggtgacagagtgagactccacgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895623 24 + 49145316 -tggcagcagagtgagactgtcttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=526161.000000 s hg38.chr19_GL949753v2_alt 644587 265 + 796479 aaaaaaaaaa---aaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAACAGGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTACAAATAAGGAttttt-gttgagtttttttt---tgtttttttcttgagacggagtctcactct s panTro4.chr19 59852501 271 + 63644993 aaaaaaaaaagaaaaaTGAATCTCAGAAATGACCACTAGCTAGAATTTCTGAACAGGAGTATGTCTTCAACCCTATGCAATCTCTTGAATATTTTTCTAACCATAATTTTAATGTGAACAGGTAGCTCACGCTGGGCTTCTTTCCATATAACAAGATTCAGCCAACTATAGTTCGTGGGTCAATTCCAACCTGCCACCTATGTCTTTTATAAATAAGGATTTTT-GTTGAGttttttttgtttgtttttttcttgagacggagtctcactct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103298787 263 - 106955855 aaaaaaagaa---aaaagaaTCTCATAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCATAATTTTAATGTGAACAGGCAACTCATGCTGGGCTTCTTTCCTTATAACAAGATTCAGCCAACCACAGTCCATGGGTCAATTCCAACCTGCCACCTATGTTTTTTATAAATAAGGAttttt-gttgagtttttttt-----tttttttcttgagacagagtctcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60588860 263 + 64156825 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCAACCCTACGTAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55727868 263 + 59248254 -aaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTACGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGATAACTCAGGCCGGGCTTCTACCCATGTAACAAGATTCAGCCAACAACAATTCATGGGTCAATTCCAACCTGCCACCTATGT-TTTTATAAATAAGGTTTTTTGGTTGAGtttttttt----atttttttcttgagacggagtctcgctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830459 259 + 51301725 ---aaaaaaa---aaaaaatactcagaaatgAACACTAGCTAGAATTTCCGAACAGGAATAGGTCTTCGACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTAACTCAGGCTGAGCTTCTTCCCATGTAACAAGATTCAGCCAACAACAGTTCATGGGTCAATTCCAACCTGCTACCTA-GG-TTTTATAAATAAGG-TTTTTGGttgagtttttttt----atttttttcttgagacggagtctcgctct i papAnu2.chr19 I 256 C 0 s chlSab2.chr6 47543380 264 + 50890351 aaaaaaaaaa---aaaaaaaTCTCAGAAATGAACACTAGCTAGAATTTCCAAACAGGAATAGGTCTTCAACCCTATGCAATCTCTTGAATATTGTTCTAACCACGATCTTAATGTGAACAGGTACCTCAGGCTGGGCTTCTTCCCACGTAACAAGATTCAGCCAACTACAGTTCGTGGGTCAATTCCAACCTGCCACCTAGGT-TTTTATAAATAAGGTTTTTTGGTTGCGtttttttt----atttttttcttgagacagagtctcgctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895647 225 + 49145316 ---aaaaaga---aaaagaaTCTCAGAAATGAACACTAGCTAGAATTTCTGAACAGGAATAGGTCTTCAACCCTATGCAAACTCTTGAATGTTGTTCTAACCATGATTTCAATGTGAACAGGTAGCACACACTGAGCTGCTTCCCACATAACAAGATTCAGCCAGCAACAATTCATGGGCCAATTCCAGCCTGACACCTGTG-----------------------------------------Gtttctttcttcaggtggaatctcactaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I e ponAbe2.chr19 56762389 1170 + 60714840 I a score=2024382.000000 s hg38.chr19_GL949753v2_alt 644852 739 + 796479 gtcgcccgggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccagattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgatgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc s panTro4.chr19 59852772 744 + 63644993 gtcgcccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcgacgggttttcaccatgttggccaggctggtcttgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaataaaaGTTTA-AAAAAAGGTGCCACTGGCCCTACCACATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACACACACAAAGCATCAGATCCGAGAACCAACTACTCACCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGCATCTGCCTGGTttttttttttgtttgtttctttgtttttttgagaaggagtcttgttctgtcgcccaggctggagtgcagtggtgca--ctcagctcactgcaacctccgccttccaggttcatgccattctcctgtctcatcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56763559 735 + 60714840 gtcacccaggctggagtgcgtaggcgccatctcagctctctgcagcctttgcctgccagattcaagcgatt-tcctacctcagccttctg-agtagctggtactat-aggggagcaccaccaagcctggttaatttttgtattttttagtagcgacaggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcaccacctgttccccaataacctatggaaatagaaGTTTA-AAAAAAGGTGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTACTATGTCATAGGAATTTGAAAGAACATACACAAAGCATCAGATCCGAGAACCAACTGCTCATCTCAAATCTTCCTTCATAGCAGGAAGAGGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------gtttgtttatttgtttg---aggagtctcgctctgttgcccaggctggagtgcagcggtgcgatctcggctcactgcaacctccgccttccaggttcacgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacccgcctcggcctcccaaagtgttgggattacaggcgtgagc i ponAbe2.chr19 I 1170 C 0 s nomLeu3.chr10 103299050 734 - 106955855 gtcacccaggctggagtgcagtggcgccatctcagctcactgcagcctctgcctcccggattcaagcgattctcctacctcagccttctg-agtagctggtactat-aggcacgcaccaccaagcctggttaatttttgtattttttagtagcaacgggttttcaccatgttggccaggctggtctcgaacct--------taggtgatctgcccaccATTcactacctgttccccaataacctatggaaataaaaTTTT--TCAAAAGGTGTCACTGGCCCTACCATATAACTCAACCTACCTTGAATAGCAGGCGGTACCATGTCATAGGAATTTGAAAGAACACACACAAAGCATCTGATCCAAGAACCAACTGCTTATCTCAAATCTTCCTTCATGGCAGGAAGAAGCTCTGCTGACATGCAAATATTAACATGTTTCTACCTGTATCTGCCTGGtttttttt-------g----tttgtttttttgagaagaagtcttgctctgttgcccaggctggagggcagtggcgcgatctcggctcactgcaacttccgccttccaggttcatgccattctcctgtctcagcctcccaagtagctgggactacaggcatccgccaccacacctggctaatttttggtatttttagtacagacagggtttcaccatgttaaccaggatggtctccatctcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60589123 730 + 64156825 gttgcccaggttggagtacggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccctaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttggtctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55728131 730 + 59248254 gttgcccaggttggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccATTcaccacctgttccccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTGGCCCTACCATGTAACTTAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAGCAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacagaatctcgctctgtcacccaggctggagtgcagtggtgagatcttggcttgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccactaccatgcctggctaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47830718 731 + 51301725 gttgcccaggctggagtgcggtggtgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctgaagtagctggtactac-agacacGCAcaaccaagcctggttaatttttttattttttagtagagatgggttttcaccatgttggccgggttggtctcgaaccc--------taggtgatttgcccgccattcaccacctgttccccaataacctatggaaataaaaatttt-acaaaaggtGTCACTGGCCCTACCATATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAatttgaaagaacacacacaaagcatCAGATCCAAGAACCAATTGCCCATCTCAAATCTTCCTTCGTAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATctgcctg----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaagctggagtgcagtggtgagatcttggctcgctgcaacctccgccttccgggtttatgccattctcctgtctcagcctcccaagtagctgggactacaggcacccaccaccatgcccggctaatttttggtaattttagtggatacggggtttcaccatgttagccaggatggtcttgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47543644 730 + 50890351 attgcccaggttggagtgcggtggcgcgatctcagctcactgcagcctctgcct-ccggattcaagcgattctcctacctcagccttctg-agtagctggtactac-aggcacgcaccaccaagcctggttaatttttgtattttttagtagagacgggttttcaccatgttggctgggttggtctcgaaccc--------taggtgatttaccagccATTcaccacctgtttcccaataacctatggaaataaaaaTTTT-ACAAAAGGTGTCACTAGCCCCACCCTATAACTCAATCTACCTCCAATAGCAGGCAGTGCTATGTCATATGAATTTGAAAGAACACACACAAAGCATCAGATCCAAGAACCAATTGCCCATTTCAAATCTTCCTTCATAACAGGAAGAGGTTCTGCAGACATGCAAATATTAGCATGCTTCTACCTGTATCTGCCTG----ttttt-------g----ttgttgtttttgagacggagtctcgctctgtcacccaggctggagtgcagtggtgagatcttggctcactgcaccctccgccttctgggttcacgccattctcctgcctcagcctctcaagtagctgggactacaggtacccaccaccatgcccaggtaatttttggtatttttagtggatacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45895872 684 + 49145316 atcg-ccaggctggagtgcagtggcacgatctcagctccctgcaacctctgcctcccagatctaagtgattctcctgcctcagcctcccg-agtagctggtactacaaggcttgccccaccacgccaggctaatttttata-tttttagtagagagggggtttcac---attggccaggctggtctcgaaccccttgaccttaggtgatctgcccaccATTCACCACCCGTTCTCCAATAATGTGTGGAAATAAAAATTTTAAAAAAAGATGTCACTGGCCCTACCACATAACTCAATCTACCTCTGATAGCAGAGAGTAC--TGTCATGTGAATTTGAAAGAACATCCACAAAGCATCAGATCCAAGAATGAATTGGCCATCTCAAATCTTCCTTCACAGCAGCAAGAGG---------CATGAAAATATTAACAGATTTTTACCTGTCTCTGCCCG--tttcttt-------t----tttttttttttgagatggagtctcactctgtgacccaggctggagagcaatgatgtgatgtcggctcaccacaacctctgcccct-------------------------------------------gattacaggcacacaccaccacgcctggctgattttttgtctttttagtagagacaaggtttcaccttgttagccaggatggtctccatctcctgaccttgtgatctgcccaccttggcctcccaaagtgttgggattacaggggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20012047 23589 - 122678785 I a score=278913.000000 s hg38.chr19_GL949753v2_alt 645591 123 + 796479 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- s panTro4.chr19 59853516 123 + 63644993 caccacgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATGTCTCTCCTGCTTGAATTCA-TGTG----------------------------------------------------------------------------CACACACACACACAC-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764294 122 + 60714840 caccgcgcctggccTCTGCCTGTTCT------------TTAATTCCTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGT-CTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------CACACACACACACAC-- i ponAbe2.chr19 C 0 I 435 s nomLeu3.chr10 103299784 123 - 106955855 cactgtgcctggccTCTGCCTGTTCT------------TTAATTCTTACCAGGTTTTTAAAAGTTACATTTG--------AAATGAATTAACAAGTACTTTCATCTCTCTCCTGCTTGAATTCA-CGTG----------------------------------------------------------------------------cacacacatacacac-- i nomLeu3.chr10 C 0 I 14 s rheMac3.chr19 60589853 165 + 64156825 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTATCTCTCCTGCTGGAATTCA-CTCGCATGcacacgtgcgcacacacacgcacgcgcacata----------------------------------catacacacacacacacacac-- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55728861 197 + 59248254 caccgtgcctggccTCTGCCTATTCT------------TTAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTGCTGGAATTCA-CTCGCATGCACACGTGCGCACACACACGCATGCGcacatacacatacacacac--acacacacacacacacacgcacgcgcacacacacacacac-- i macFas5.chr19 C 0 I 18 s papAnu2.chr19 47831449 176 + 51301725 caccgtgcctggcctctgcctATTCT------------TTAATTCTTGTCAAGTTCGT-AAAGTTACATTTG--------AAATGAATTAACCAgtactttcttctctcttctgcttgaaTTCA-CTtgcatgcacacgtgcgcacgcacatgc----------------------acatacacacatacacatacacatacacacacacacacacacac-- i papAnu2.chr19 C 0 I 18 s chlSab2.chr6 47544374 137 + 50890351 caccgtgcccggccTCTGCCTATTCT------------TCAATTCTTATCAAGTTCTTAAAAGTTACATTTG--------AAATGAATTAACCAGTACTTTCTTCTCTCTCCTCCTTGAATTCA-CTTGCATGCACACGTGCG--------------------------------------------------------------CGcacacgcacacac-- i chlSab2.chr6 C 0 I 18 s calJac3.chr22 45896556 120 + 49145316 caccacacccagcc----------------------------TTCTTACCAAGTTCTTACCAGTTACATTTT--------AAATGAATTA---AGGACTTCCATATCTCTCCTGCTTGAATTca-cata----cacacgcgcacacgca--------------------------------------------------------cgcacacacgcacac-- i calJac3.chr22 C 0 I 2 s canFam3.chr1 102623198 144 + 122678785 CACTATGTCTTGCTTTTTTTTTTTTTAACATCCTCTTGCCAGGTCTCATCAGATCTGTCAGTATCATACTTGGGGTATTCAGAGAAGCTATTAAATGCTTGCA--TCTGTGCTACTTGAATCCAGTATG----------------------------------------------------------------------------CACATGCACACAAATAA i canFam3.chr1 n 23589 C 0 a score=1041552.000000 s hg38.chr19_GL949753v2_alt 645714 291 + 796479 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCAGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT s panTro4.chr19 59853639 291 + 63644993 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACAATCAGGGTAACTCAAGCCTTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAGAAGGATGAGAACATTTCCACAACTCCAACCTGCTCGGTGATGTCCACATGCTAGGGTACTCAGCTTCAGCCCTTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56764851 291 + 60714840 CCAGCAGGGACTTACACCAAGGTCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGAGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTTGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAAAGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTTCCTGT i ponAbe2.chr19 I 435 C 0 s nomLeu3.chr10 103299921 291 - 106955855 ccaacaGGGACTTACACCAAAGTCTGCAGTTTACAGTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTTCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTACAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAATATGAAACAAATGGTAAAAGTATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACGTGCTAGGGTCCTCAGCTTCAACCCTTCCTGT i nomLeu3.chr10 I 14 C 0 s rheMac3.chr19 60590036 291 + 64156825 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55729076 291 + 59248254 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAGCTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATATCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i macFas5.chr19 I 18 I 303 s papAnu2.chr19 47831643 291 + 51301725 ccagcaGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCAATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCCACATGCTAGGGTCCTCAGCTTCAGCCCTCCCTGT i papAnu2.chr19 I 18 C 0 s chlSab2.chr6 47544529 291 + 50890351 CCAGCAGAGACTTACACCAAGGCCTGCAGTTTACACTCAGGGTAACTCAAGCCCTCACACAGAAACTTCACCCCTGTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGCTGCTGGCTGACAACCAAGACAGCAGCAAGGTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCTAACCTGCGAAAGTATGAAACAAATGGTAAAAGGATGAGAACATTTCCACAACTCCAACCTGCTTGGCGATGTCTACATGCCAGGGTCCTCAGCTTCAGCCCTCCCTGT i chlSab2.chr6 I 18 C 0 s calJac3.chr22 45896678 290 + 49145316 CCAGCAGGGACTTACACCAGGGTCTGCAGTTTACAGTCGGGGTAACTCAAGCCCTCACACAGCAACTCCACCCCTCTATCCCCGATGGGGTTCTTGGCCAAGCACAGGTGTGTCAGATGCTGGTTGACAATCAAGACATTAGCAAGCTCCTTGCAACTGGCTTCTGTAAGACGACAGTTTTCCAACCTGCAAAAACATGAAACACATGGTCACATGATAAGAACGCTTCCCAAACTCCAACCTGCTC-GCCATGTCCACGTGCCGGGGTCCTCAGCATCTGCCCTGCCCGT i calJac3.chr22 I 2 C 0 s canFam3.chr1 102623342 290 + 122678785 CTAGCATGGACTTACACCAGCATCTGTAGTTGACAGTCAGGGTAACTCAAGCCTTCACACAGAAGCTTTACCCCATCATCTCCCAGAGTGTTCTTTGCCAAACTCAGGTGCGTCAGCCTCTGGTTGACAATCAAAGCTGAAGAGAGCTCTTTGCAACAGGCTTCTGTAAGTTGACAGTTTTCCAACCTGCCAAAGCACCACACAAATGGTAAGAGGGTGAGAACATTTCCAAAAC-CCAATTTTCTTGGCTGTCCCTAAAGGCCAGAGGCCCCATCTATGGCTCATCTTGT i canFam3.chr1 C 0 I 16 a score=206281.000000 s hg38.chr19_GL949753v2_alt 646005 71 + 796479 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT s panTro4.chr19 59853930 71 + 63644993 TCATCCCCTGC--CCTCTGTCCTGTGGGAGTCATCATG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765142 71 + 60714840 TCATCCCCTGC--TCTCTGTCCTGTGTGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300212 71 - 106955855 TCATCCCCTGC--CCTCTGTCCTGTGCGAGTCATCACG-------------GCCACAAAAGAGCAGGAAGGCGAGAAGGCCAAGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590327 71 + 64156825 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729670 71 + 59248254 TCATCCCCTGC--CTTCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47831934 71 + 51301725 TCATCCCCTGC--CCCCTGTCCTGTGCAAGTCATCACG-------------GCCACGAAAGACCAGAAATGCGAGAAGGCCAAGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47544820 71 + 50890351 TCATCCCCTGT--CCTCTGTCCTGTGCAAGTCATCATG-------------GCCACAAAAGACCAGAAATGCGAGAAGGCCAAGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45896968 70 + 49145316 TAATCCCCTGC--CCTCTGTCCTGAGCG-GTCGTCACA-------------GCCGCAAAAGACCGGGAATGCGAGAAGGCCAAGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102623648 83 + 122678785 tcatctatagcatctatagctctatagcTCTCATCATGTGCTTAACACTCAATCATGAAGGA---AGGATGAGGGAATGATAAGAT i canFam3.chr1 I 16 C 0 a score=94809.000000 s hg38.chr19_GL949753v2_alt 646076 41 + 796479 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt s panTro4.chr19 59854001 41 + 63644993 GCAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765213 50 + 60714840 GCAGCGGTCCACCTGCAGCCATCACAGGACACCGGTGttctttcg--------------------tttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300283 70 - 106955855 GCAGCAGTCCACCTGGAGCCATCACAGGACACAGGTGTTCTTTCGtttgttttttttttttttttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590398 41 + 64156825 GTTGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttgt i rheMac3.chr19 C 0 I 180 s macFas5.chr19 55729741 41 + 59248254 GTAGCGGTCCACCTGGAGCCATCACAGGACACAGGTG-----------------------------ttgt i macFas5.chr19 C 0 I 181 s papAnu2.chr19 47832005 41 + 51301725 GTAGCGGTCCACCTGGAGCCCTCACAGGACACAggtg-----------------------------ttct i papAnu2.chr19 C 0 I 693 s chlSab2.chr6 47544891 41 + 50890351 GTAGCGGTCCACCTGGAGCCGTCACAGGACACAGGTG-----------------------------ttct i chlSab2.chr6 C 0 I 9 s calJac3.chr22 45897038 39 + 49145316 GCAGCGGGCCACCTGTAACCATCTCAGGAAGCAGCTG-----------------------------TT-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=27454.000000 s hg38.chr19_GL949753v2_alt 646117 11 + 796479 ttttgagacgg s panTro4.chr19 59854042 11 + 63644993 ttttgagacgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765263 11 + 60714840 ttttgagacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300353 11 - 106955855 ttttgagacgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590619 11 + 64156825 ttttgagacgg i rheMac3.chr19 I 180 C 0 s macFas5.chr19 55729963 11 + 59248254 ttttgagacgg i macFas5.chr19 I 181 C 0 s papAnu2.chr19 47832739 11 + 51301725 ttttgagacgg i papAnu2.chr19 I 693 C 0 s chlSab2.chr6 47544941 11 + 50890351 ttttgagatgg i chlSab2.chr6 I 9 I 175 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897077 0 + 49145316 C a score=273560.000000 s hg38.chr19_GL949753v2_alt 646128 106 + 796479 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatcgccgcctcccaggtttacaccattctgctgactcagcctcctgagta s panTro4.chr19 59854053 106 + 63644993 agtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcggttcactgccaatctccgcctcccaggtttacaccattctcctgactcagcctcctgagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765274 106 + 60714840 agtctcgctctgtcgcccaggctggagtgcagtggcacgatctcagctcactgccaatctccgcctcccgggttcacgccattctcctgactcagcctcctgagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300364 105 - 106955855 agtctcgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactg-caagctccgccgcccaggttcacgccattctcctgcctcagcctcctgagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590630 106 + 64156825 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgcaaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55729974 106 + 59248254 agtctcgctctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832750 106 + 51301725 agtctcactctgtcgcccaggctggagtacattggcgctatctcggctcactgccaagctctgcctcctgggttcacaccattctcctgccttagtctcccgagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545127 106 + 50890351 agtctcgctctgtcgcccaggctggaatgcattggcgctatctcggctcactgccaagctccgcctcctgggttcacgccattctcctgccttagtctcccgagta i chlSab2.chr6 I 175 C 0 s calJac3.chr22 45897077 80 + 49145316 -------------------------Tgtgcagtggcgccatctcggctcacag-caacctccacctcccgggctcaagcgattctcctgcctcagcctcctgagta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=288747.000000 s hg38.chr19_GL949753v2_alt 646234 132 + 796479 gctgggactacaggcgc-----------------------ccaccacacctggataattttttgtattttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt s panTro4.chr19 59854159 155 + 63644993 gctgggactacaggcccacctactgggtataaaaaattatccaccacacctggataattttttgtattttttagtagagacggagttttaccatgttagccaggatggtctcgatctcttgacctcgtgatctccccgccttggcctcccaacgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765380 132 + 60714840 gctgggactacaggcac-----------------------ccaccacgcctggataattttttgtattttttagtagagatggggtttcaccgtgttagccaggatggtctcaatctcttgacctcgtgatccacccgccttggcctccaaacgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300469 132 - 106955855 gctgggactacaggcgc-----------------------ccaccacgcctggataatttttcgtattttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcttgacctcgtgatctgcccgccttggcctcccaacgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590736 135 + 64156825 gctgggactacgggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagaggtggggtttcaccatgttagccaggatggtctcgatctcttggcctcgtgatccgcccgccttggtctcccaaagt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730080 135 + 59248254 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctccatctcttgacctcgtgatccgcccgccttggtctcccaaagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832856 135 + 51301725 gctgggactacaggcgcccg--------------------ccaccgcacccggctaattttttgtattttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcttgacctcgtgatccgcccgccttcgtctcccaaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545233 124 + 50890351 gctgggactacaggcgccca--------------------ccaccgcacccggctaattttctgtattttttagtagagacggggtttcactgtgttagccagcatggtctcgatctcttgaccttgtgatccgcccgccttc-----------t i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C e calJac3.chr22 45897157 0 + 49145316 C a score=386734.000000 s hg38.chr19_GL949753v2_alt 646366 139 + 796479 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag s panTro4.chr19 59854314 139 + 63644993 gctgggatt--acaggcatgagccaccgcacccggccTG--Tttttggtatttttaatagaaacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacct----ctc------tgctgagattatag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765512 139 + 60714840 gctgggatt--acaggcatgagccaccgcgcccggccTG--Tttttggtatttttaatagagacacggtttcaccacgttggccaggttggtctcaaactcctgaactcagatgatccgcccacct----ctc------tgctgagattacag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103300601 139 - 106955855 gctgggatt--acaggcgtgagccaccgcgcccagccTG--Tttttggtatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatctgcccacct----ctc------tgctgagattacag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60590871 151 + 64156825 gctgggctt--acagacgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccagggtggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtggtgagattacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730215 151 + 59248254 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacggggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47832991 151 + 51301725 gctgggatt--acaggcgtgagccaccacacccaccctgttttttttgtatttttaatagagacagggtttcgccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47545357 150 + 50890351 gctgggatt--acaggcgtgagccaccgcacccaccctg-tttttttatatttttaatagagacagggtttcaccatgttggccaggttggtctcgaactcctgaactcagatgatccgcccacctcagcctcccaaagtgctgagattacag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897157 150 + 49145316 gctgggatgcaccagacatgcacagccacagctg-tcag--tttttggtattcttagtggagacagggttttgccatgttggccaggttggtctcgaactcctgacctcagatgatctaccctcttcggcctcccaaagtgctgagattacag i calJac3.chr22 C 0 C 0 e canFam3.chr1 102623731 0 + 122678785 C a score=1190693.000000 s hg38.chr19_GL949753v2_alt 646505 372 + 796479 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC s panTro4.chr19 59854453 372 + 63644993 gcaggagccaccgtgccggg--ccTGAAG-------CAGGTGTTTATTTCAGCAAGAGGCACCACGTGGGTGGTGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATAGCCCCAGAACTA-AACCAGAGCTGCCCATGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTTTGGGCGTGTCATGGTCTTGTACAGCAACATGGCACCCTCATCCAGGAGCACATTGGCTGAGAGACGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56765651 372 + 60714840 acaggagccaccgcgcccgg--ccTGAAG-------CAGGTGTTTATTTCAGCGAGAGGCGCCACGTGGGTGGCGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACATTGGCTGAGATGTGCAGGTGCTTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCCGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATACCCTATCAGC i ponAbe2.chr19 C 0 I 20 s nomLeu3.chr10 103300740 372 - 106955855 gcaggagccaccgcgcccag--ccTGAAG-------CAGATGTTTATTTCAGCGAGAGGCGCCACGAGGGTGACGCAGTAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAACTA-AACCAGAACTGCCCGTGGGAAGAGGAA----ACTTACGACAACATCTGCAGGAAGTGTTCTGGGTGTGTCATGGTCTTGTACAGCAACTGGGCACCCTCGTCCAGGAGCACATTGGCTGAGAGATGCAGGTGCTTCAGGGACTCATTGGCTTTGAGGACATAGAAGAATTCAGCCCACTGCTCTGGGGTGGCACAGTGACCTCCCAACCTGTGAAAAGAGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTACACCCTATCAGC i nomLeu3.chr10 C 0 I 12 s rheMac3.chr19 60591022 371 + 64156825 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTGTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGGCCGTGGGAAGAGGAT----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAtt i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55730366 371 + 59248254 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGGGTGGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAGC i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47833142 371 + 51301725 gca-gagccaccatgcccag--cctgaag-------caGGTGTTTATGTCAGCGAGAGGTGCCACGTGGGTGACCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACTGGAGCTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAGAAGAAATCAACCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCGTGGGAA-AAGTCATTCTTCTAGGAGGACAGAGTATAACctatcagc i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47545507 371 + 50890351 gca-gagccaccatgcccag--ccTGAAG-------CAGGTGTTTATGTCAGCGAGAGGTGCCATGTGGGTGGCCCAGCAAGT-CAGGTGTTACC-----CTTTCTCTTCTATGGCCCCAGAGCTA-AACCGGAACTGCCCGTGGGAAGAGGAG----ACTTACGACAACATCTGTAGGAAGTGTTTTGGGTGTGTCATGGTCTTGTACAGCAACTTGGCACCCTCGTCCAGGAGCACACTGGCTGAGAGGTGCAGGTGCCTCAGGGACTGGTTGGCTTTGAGGACATAAGAGAAATCAGCCCACTGCTCCGAGGTGGCACAGTGACCTCCCAACCTGTGAAAAGCATAGGAA-AAGTCATTCTTCTGGGAGGACAGAGTATAACCTATCAgt i chlSab2.chr6 C 0 I 320 s calJac3.chr22 45897307 370 + 49145316 gcatgagtcaccatgcccag--ccTGAAG-------CGGGTGTTTCTATCAGGGAGAGGTACCACGTGGGCAGCCCAGCAAGT-CGGGTGTTACA-----GTTTCCCTTCTCTTTTACCTGACCCA-CACCAGAGCTCCCCATGGGAAGAG-------ACTCACGACAACTTCTGCAGCAAGTTCGTTGGGTGTCCTATGGTCTCATACAGCAACTTGGCACCCTCGTCCAGGAGCAGATTGGCTGAGAGGTGTAGGTGCCTCAGGGACTGGTTCGCTTTGAGAAGAAAGGAGAAATCCGCCCACTGCTCTGGGGTGGCCGAGTGGCCTCCAAACCTGTGGGAAGAGTGGGAGTCAGTCATTCGTTTGTGAGGACAGAGAGCACCAGATCAGC i calJac3.chr22 C 0 I 5 s canFam3.chr1 102623731 383 + 122678785 GCATGAGCCA-CATACCTGGGACCAGAAATGGGAACCAGGTGTCCACATCAGTAGGAGGTCCCATATGGGTAGTCCAGCAAATCCAGATTTTACCCACTGCTCTTCCCTATGTGGCCCCAAACATAGGAAAAGAGATGCTCCCAGGGAGAGAGGCAGTACTTACGACAGTCTCTGCAGGAAGCATTTTGGGTGTCTCAGAGTTGTGCACAGCAACTTGGCACTCTCATCTGGGAGCTCATTGGCTGTGAGGTTCAGGCATGTCAGGGACTGGTTGATTTTGAGGGAGGAGGAGAGATGGGCCCATTGCTGAGTGGTGGCAGAACAAGATACCAACCTGCCAGAAGAATGGGAACACATTATTTTTTTTAAAG---------TAtttttttaac i canFam3.chr1 C 0 C 0 a score=41193.000000 s hg38.chr19_GL949753v2_alt 646877 11 + 796479 ttttttttttt s panTro4.chr19 59854825 11 + 63644993 ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766043 11 + 60714840 ttttttttttt i ponAbe2.chr19 I 20 C 0 s nomLeu3.chr10 103301124 11 - 106955855 ttttttttttt i nomLeu3.chr10 I 12 C 0 s rheMac3.chr19 60591395 11 + 64156825 ttttttttttt i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55730739 11 + 59248254 ttttttttttt i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47833515 11 + 51301725 ttttttttttt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47546198 11 + 50890351 ttttttttttt i chlSab2.chr6 I 320 C 0 s calJac3.chr22 45897682 11 + 49145316 ttttttttttt i calJac3.chr22 I 5 C 0 s canFam3.chr1 102624114 11 + 122678785 ttttatttatt i canFam3.chr1 C 0 I 3380 a score=359343.000000 s hg38.chr19_GL949753v2_alt 646888 126 + 796479 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagg s panTro4.chr19 59854836 126 + 63644993 ---------------gagacagagtttcactctgttgcccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccgcctcccgggttcaagctattctcctgcctcagcctccgaagtagctgggattacagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766054 126 + 60714840 ---------------gagacagagtttcactctgttacccagtctggaatgcaaaggcgtgatctcacctcactgcagcctccacctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301135 126 - 106955855 ---------------gagacagagtttcactctgttgcccagtctggagtgcaaaggtgtgatctcacctcactgcagcctccgcctcccgggttcaagccattcttctgcctcagcctcccaagtagctgggatgacagg i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60591406 126 + 64156825 -------------gggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730750 139 + 59248254 tttttttttttgggggggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833526 128 + 51301725 tttt-----------gggac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccacctcccgggttcaagcaattctcctgcctcagcctcccaagcagctgggattacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546209 124 + 50890351 ---------------gagac--agtttcactctgtcacccaggctggagtgcaatggcgtgatctcacctcactgcagcctccgcctcccgggttcaagcgattctcctgcctcagcctcccaagcagctgggattacagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897693 141 + 49145316 ttttttttttttaaggagacagagtttcaccctgttgctggggctggagcccaatggcacaatctcggctcactgcagcctccgcctcccaggttcaagcaattctcctgcctcaacctctcaagtagctaggattacagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=171564.000000 s hg38.chr19_GL949753v2_alt 647014 85 + 796479 ----------cattc---gccaatttttgtatttttagtagagacgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc s panTro4.chr19 59854962 85 + 63644993 ----------cattc---gccaatttttgtatttttagtagagacaggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766180 85 + 60714840 ----------catac---gccaatttttgtatttttagtggagatgggatttcaccatgttggccacactggtcttgaactcctgacctcaggtgatc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60591532 85 + 64156825 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcctgacctcaggtaatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730889 85 + 59248254 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttggactcccgacctcaggtaatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833654 85 + 51301725 ----------cacac---gccaatttttgtatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47546333 85 + 50890351 ----------cacac---gccaatttttatatttttagtagagatgggatttcaccatgttgaccatgctggtcttgaactcccgacctcaggtaatc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897834 86 + 49145316 cacatggcaccatgcccggctaatttttgta-ttttattaaagaggg-----------gtttgccaggctggtctcaaactcctgacgtcaggtgatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e nomLeu3.chr10 103301261 100 - 106955855 M a score=614228.000000 s hg38.chr19_GL949753v2_alt 647099 214 + 796479 cacccaccttggcctaccgaagtactgggattacaggtgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTACTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGGGTAACATCCAGCCA s panTro4.chr19 59855047 214 + 63644993 cacccaccttggcctcccgaagtgctgggattacaggcgtgagccaccgcgcctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGCCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766265 214 + 60714840 cacccacctcggcctcccaaagtgctgggattacaggcgtgagccactgcacctggcc-CAGATCAGCTTCTTCTGCTTCACTTCCCAAGACATTATGTCTTTCGTTTATCTCATTCTA--CTCATGTCTGCAACCCTGGCCTGAATTATTGGAGAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATGGCCATTAGAATAACATCCAGCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301361 214 - 106955855 cacccacctcggcctcacaaagtgcagggattacaggcgtgagccaccatgcctggcc-CAGATCAGCTTGTTATGCTTCACTTCCCAAGACAATATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCGTGAATTATTGGAAAGATCTAATGTTGCCTCTGCTTCTTCAAGTATCCCCATAGCCACTAGAGTAACATCCAGCCC i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60591617 213 + 64156825 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55730974 213 + 59248254 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacgcccggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACG-TACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAGCCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47833739 211 + 51301725 cacccacctcggcctctcaaagtgctgggattacaggtgtgagccaccacacctggct-cacatTAG---CTTCTGCTTCACTTCCCAAAACATTATGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACTCCGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCTTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCa i papAnu2.chr19 C 0 I 5286 s chlSab2.chr6 47546418 214 + 50890351 cacccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcctggcT-CAGATCAGCTTCTTCTGCTTCACTTCCCAAAACGTTACGTCTTTGGTTTATCTCATTCTA--CTCATGTCTCCAACCCTGGCCTGAATTATTGGAGAGATCTAATCTTTCCTCTGCTCCTTCAAGTATCCCCATGGCCATTAGAGTAACATCCAGCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45897920 216 + 49145316 cgcccacctcggcctcccaaa-tgctgggattaaaggtgtgagccaccacacccggccTCTTATCAGCTTCTTATGCTTCACTTCCCAAAACACTGTGTCTTTGGTTTATCTCATTTTACTCTCCTTTCTCCAACCCTGGCCTGAATTATTGGAGAAATCTAATCTTTCCTCTGCTTCTTCAAGTTTCCTCATGGCCACTGGAGCTACGTCCAGCCT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I a score=1159471.000000 s hg38.chr19_GL949753v2_alt 647313 533 + 796479 CTTCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGCAGGGGGGAAAAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggcgcagtggttcatgcctgtaatcctagcactttggga---ggccgagacaggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccct-gtctctattaaaaatacaaacatttgccaggcgtggtggtgcacgcctgtaaccccagctactcgggaagctgaggcag---aactgcttg-aacccaggaggcggaggttgcagtgaa-cgagatcgcgccactgcgctccagcctgggtgacaagaataaaact s panTro4.chr19 59855261 540 + 63644993 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGCGG-AAAAAAAAAtttttttttttagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggccaccacaac--ctgtctcctgggctcaaatgatcctccc-acctcagcatccactgtagctgggactaGAAGGGGCAAGCAAATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccccgtctctattaaaaatacaaacatttgccaggcgtggtggtgtatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-cgagatcgcaccactgcactccagcctgggtgacaagaataaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56766479 533 + 60714840 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAGGATTTTGTAGGGGG---AAAAAAAttttttttttgaaacagcatatcgctctgttgcccaggctagagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcaaatgatcttccc-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAATTTTTATCCTggccaggtgcagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttgccaagcgtggtggtacatgcctgtaaccccagctactcgggaagctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcactactgcactccagcctgggcaacaagagtaaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103301575 530 - 106955855 CATCTCCAAGAGATTGTAATACAATTCTGTGCAATGTTTCACCAAAACGGCCTGTGTGGATGATTTTGTAGGGGG---AAAAAAAttttttttttgagacaggatctcgctctgttgcccaggctggagtgcagtggcatgatcacaggtcaccacaac--ctgtctcctgggctcagatgatcctccc-acctcagcctccagtgtagctggaactaGAAAGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtacagtggttcatgcctgtaatcctagcactttggga---ggccgaggcaggtggttcacttgagatcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctattaaaaatacaaacatttggcaggcgtggtggtgcgtgcctgtaacccgagctacttgggaggctgaggcaggagaactgcttg-aacccaggaggcagaggttgcagtgaa-tgagatcgcaccactgcactccagcctgg---acaagaggaaaact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60591830 540 + 64156825 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGAAGATTTTGTAGGGAA---GAAAAAA-AttttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgggctcaaatgatcctcccaacctcagcctctagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggcccaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtacatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggtgacaagagtaaaact i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55731187 538 + 59248254 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCACCAAAATGGCCTGTGTGGATGATTTTGTAGGGAA---GAAAAAA-Attttttttgagacaggatctcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaac--ctgtctcctgggctcaaatgatcctcccaacctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggctcatgcctgcaatcctagcactttgggatccggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccaacgtggtgaaacccc-gtctctactaaaaatacaaacatttgttgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaaacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccagccttggcgacaagagtaaaact i macFas5.chr19 C 0 I 112 s chlSab2.chr6 47546632 527 + 50890351 CATCTCCAAGAGACTGTAATACAATTCTGTGCAATGTTTCGCCAAAATGGCCTGTGTGGATGATTTTGTAGGGGG---GAAAACAttttttttttgagacaggatttcgctctgttgcccaagctggagtgcagtggcatgatcacagctcaccacaacctctgtctcctgagctcaaatgatcctcac-acctcagcctccagtgtagctgggactaGAAGGGGCAA----ATTGATGCTTAATACTCAAAATAAAAATTTTATCCTggccaggtgcagtggtccatgcctacaatcctagcactttggga---ggccgaggcaggtggatcacttgaggtcagaagttcaagaccagcctggccagcgtggtgaaacccc-gtctctactaaaaatacaaacatttgccgggcatagtggtgcatgcctgtaatcccagctactcgagaggctgaggcaggagaatcgcttg-aacccaggaggcataggttgctgtgagccgagatcgcaacactgcactccag---------caagagtaaaact i chlSab2.chr6 C 0 I 7 s calJac3.chr22 45898136 530 + 49145316 CGTCTCCAAGAGACTGTAATAGAATTCTGTGTAACGTTTCACCAACAGGGCCTGTGGGGATGA-TTTGTAGGGGA---AAA-----Gttgtttttgagacaggaactcgctctgttgcccaggctggagtgcagtggcgtgatcatggctcagcaccacctctgtctccagggctcaagcaatcctcct-acctgggactccagcatagctgggactagaagggggaa----attgatgcttaatactcaaaataataagtttatcctggccaggcaggatggcttttgcctataatcccagcacttgggga---ggcagaggcaagttgatcacttgaggccaggagttcgagacaagcctggccagcatggtgaaccccc-atctctactaaaaatacaaaaattagctgggtgtggtggtgtgtgcctgtaatcccaggtacttgggaggctgagacaggagaatcacttg-aacccgggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggtgacaagaataaaact i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=28256.000000 s hg38.chr19_GL949753v2_alt 647846 25 + 796479 gtctcaaagaaaaaaaaaaaaaaaa s panTro4.chr19 59855801 24 + 63644993 gtctcaaagaaaaaaaaaaaaaaa- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767012 22 + 60714840 gtctcaaagaaaaaaaaaaaaa--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302105 22 - 106955855 gtctcaaagaaaaaaaaaaaaa--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592377 22 + 64156825 ccctcaaaaaaaaaaaaaaaac--- i rheMac3.chr19 I 7 C 0 s chlSab2.chr6 47547166 25 + 50890351 ctctcaaaaaaaagaaaaaaaaaaa i chlSab2.chr6 I 7 I 1 s calJac3.chr22 45898666 23 + 49145316 --gtcaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I e macFas5.chr19 55731725 112 + 59248254 I a score=1074725.000000 s hg38.chr19_GL949753v2_alt 647871 533 + 796479 aaGATTCTCAT-TGAGTGCAGAGAaggttgcatgctccttatgaatacctaactcctgatgatctgagattgaTGATCCATTCTCCTCAGGCTCCCAAAGTGCGAGGATCAT-GCACTCCATA-GGATCAGGCACCAACGATTAGCTCCTGTGCC---tgatctgagatcgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaaactgtcttgtgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAATAGCATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATGGATAGCTGGTTATGCAACACAGAAGACAAGCTGGTGGGGGAAAGAGGAGAGGCCGACTCCCCCACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCAGCAACACGGTGCAGTGGACTCCAGGTGCTGGGGAGAGCC s panTro4.chr19 59855825 529 + 63644993 --gaTTCTCAT-TGAATGCAGAGGaggttgcaggctccttatgaatacctaactcctgatcatctgagattgatgatccattctcctcaggctcccaaagtgcggggatcaT-GCACTCCATA-GGATCAGGCACCAATGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccccaaaccc--gtctgtggaaaaa-ctgtcttgcgcaaaaccggcccgcggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAATTAGGCAAGGTGCAGTCAGGAACAACATGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTCCATCGATAGCTGGTTATGCAACACAGAAGACAAGCTGGCGGGGGAAAGAGGAGAGGCCGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCCCCGGCAACGCGGTGCAGTGGACTCCGGGTGCTGGGGAGAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767034 531 + 60714840 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctctttatgagtacctaactcctgatgatctgagattgatgatccatttacctctggctcccaaagtgctgggatcatagCACTGCATA-AGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacggtttcatcccaaaactacccccaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgacccctggtgcagaaaaggctgggggccactgCTCTCAAACCCAACAGTTTGGCAAGGAGCAGTCAGGAATAGCACATCCCTAAAGTTGGAACCCAGCACAGAATTCCGGGTGTTTCTTTGCATCAGTAGCTGGTTATGCAACACAGAAGTCAAGCTGGCAGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTGCCTGTCTGGGACGGCATCTGGAGTGGTTACCCTTTTTCCTAGATCCGCCGGCAACACGGTGCAGTGGACTCCAGGTACTGGGGAGAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302127 531 - 106955855 --GATTCTCA--TGAGTGCAGAGAaggttgcatgctccttctgagtaccgaactcctgatgatctgagattgatgatccattcacctcaggctcccaaagtgctgggatcatagCACTGCATA-GGATCAAGCACCAACGATTAGCTCCTGTGCC---tgatctgagattgaacagtttcatcccaaaactacccgcaaacccctgtctgtggaaaaa-ctgtcttgcacaaaaccgggccccggtgcagaaaaggctgggggccactgCTCTCAATCCCAACAGTTAGGCAAGGTGCAGTCAGGAATAGCACGTCCCTAAAGCTGGAACCCAGCACAGAATTCGGGGTGTTTCTTTGCATTGATAGCTGGTTATGCAACACAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCAG-ACACAGGCCTGTTTGAGGAATACACTCCCTGTCTGGGATGGTATCTGGAGTGTTTATCCTTTTTCCTAGATCCCCCTGCAACACGGTGCAGTGGACTCCGGGTACTAGGGAGAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592399 536 + 64156825 aaGATTCTCATAGAAGTACAGAGAaggttgcatgctcc--atgagtacctaactcctgatgatctgagattgaTgatccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGCTCAGGCACCAACAATCAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctttctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55731837 538 + 59248254 AAGATTCTCATAGAAGTGCAGAGAaggttgcatgctccatatgagtacctaactcctgatgatctgagattgatgagccattcacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCACCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaacta-ccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctgggggccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAGAGCCGGAACACAGCACAGAATTCGGGGGGTTTCTTTGCATCGAGAGCTGGTTATGCGACGCAGAAGCCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCCGTCTGGGACGGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCCGGCAACGCGGCGCAGCGGACTCTGGGTACTGGAGAGAGCG i macFas5.chr19 I 112 C 0 s chlSab2.chr6 47547192 539 + 50890351 aaGATTCTCATAGGAGTGCAGAGAaggttgcacgctccatgtgagtacctaactcctgatgatctgagattgatgatccgtttacctcagactcccaaagtgctgggatcatagCACTGCATAGGGATCAGGCAGCAACAATTAGCTTCagtgcccgatgatctgagattgaacagtttcatcccaaaactacccccgaacctctgtctatggaataa-ttctcttgcacaaaatcggcccccattgcagaaaaggctggggaccgctgCTCTCCATCCCAACATGTAGGCAAGCTGCAGTCAGGAATAGCACGTCCCTAAAGCCGGAACACAGTACAGAATTCGGGGTGTTTCTTTGCATCGAGAGCTGGTTATGCGACCCAGAAGTCAAGCTGGCGGGGGAAAGAGGAGAGGCTGACTCCCC-ACACAGGCCTGTTTGAGGAATACATTCCCTGTCTGGGACAGCATCCAAAGTGGTTACCCTTTTCCCTAGATCCCCTGGCAACGTGGTGCAGCGGACTCTGGGTACTGGGGAGAGCG i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45898689 479 + 49145316 aggaatctcataggactat-gagaaggttgcatgctccctgtgagtccctaactcctaatgatctg-gactgatgatctatccgcctcaggctcccaaagtactgggatcacCTCACTGCACGGGGATCAGGCACCA-------------GAgcctgatgatctgagattgaacagtttcatcccaaaacttcccccaaacccctgtctgtggaaaac-ctgtcttgcacaaaaccggtccccagtgcagaaaaagctggcggccgctgCTCTCAATCCCAGCAGGTAGGCGAGAGGCAGTCAGGGGTAGCCCGTTTCTAAAGCTGGAACACAGCACAGAGTTCTGGGTGTTTCTTTGCATGGAGAGCTGGTCATGTCACACCGAAGTCAAGCTGGTGGGGG---GAAGAGAGGCTGACACCCC-ACACAGGCCTGTTTGAGGGATATGTTTCCTGCCTG------------------------------------------GCAACGCGGTGTAGAGGACTCCGGGTCCTCGGGAGAGCC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102624125 3380 + 122678785 I e papAnu2.chr19 47833950 5286 + 51301725 I a score=234680.000000 s hg38.chr19_GL949753v2_alt 648404 94 + 796479 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT s panTro4.chr19 59856354 94 + 63644993 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGGTCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767565 94 + 60714840 GTGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATTGTGCGTTCCCACTCGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302658 94 - 106955855 GTGACCGTGAGACCCACCTCAGGTACTGCAGTTTGCATTTATGATTTCTGAGCAGATCACACAGCATCAGCATCATCGTGCGTTCCCACTCGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60592935 94 + 64156825 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732375 94 + 59248254 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGAGCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547731 94 + 50890351 GAGACCGTGAGACCCACCTCAGGTACTGCAGGTTGCATTTGTGATTTCTGACCAGATCACACAGCAGCAGCAGCATCGTGCGTTCCCACTCGAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899168 94 + 49145316 AAGACCGTGAGACGCACCTCAGGTACTGGAGGTTGCCTCTGGGAGTCCTGAACAGGTCACACATCAGCAGCAGCATCGTGCGTTCCCACTCGAT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627505 88 + 122678785 GTGATGGTGAGATATACCTGAGGTATTGCAGATTACATTTTGGGTGTCTCAAGATTTCACACAAAATGGGAAGCATATCA---TTCTGGTC--- i canFam3.chr1 I 3380 C 0 e papAnu2.chr19 47833950 5286 + 51301725 I a score=351939.000000 s hg38.chr19_GL949753v2_alt 648498 114 + 796479 GTGCCCTGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA s panTro4.chr19 59856448 114 + 63644993 GTGCCCCGCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCGGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767659 114 + 60714840 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302752 114 - 106955855 GTGCCCTTCCAGAGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTACGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGAAGAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593029 114 + 64156825 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732469 114 + 59248254 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCCTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACGTTTTTAATCCTAGGGAAAAGCAGGAGAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3416370 112 - 51301725 GTG-CCTTGCAGGGTCAGATGCGTTACAGTCTTGTGACCTCGAAGAGCTAGGCAGAGGTTCCGATGAGCATCAGCTGGGAAAACGTTTTTGAACCTAgggaaaa-caaaagtga i papAnu2.chr19 T 54731 I 1199 s chlSab2.chr6 47547825 114 + 50890351 GTGCCCTTCCAGGGTCAGGTGCGTGAGGGTCTTCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCAGTGTCAGGGGTGACATTTTTAATCCTAGGGAAAAGCAGAAGAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899262 114 + 49145316 ATGCCCTTCCAGGGTCAGGTGAGTGAGGGTCGGCTTCCCAATGAAAGCAAGACAGAAGTCCCGGTAAGCACTGTCAGGGGTGACGTTTTTAATCCTAGGAAAAAGCAAGAGAGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627593 113 + 122678785 ATTTCCTTGGAGAGTCAGATGCGTGAGAGTCTCATGACCACCAAAAGCAATGCAGAAGTTTCTATAAGCGTCTGCTGGGAAAATATTTTTGAGGCTAGGGAAAGG-ATAAGAAA i canFam3.chr1 C 0 C 0 a score=157049.000000 s hg38.chr19_GL949753v2_alt 648612 75 + 796479 TTCCACTTGGAGTGATTAATACTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT s panTro4.chr19 59856562 75 + 63644993 TTCCACTTGGAGTGATTAATCCTCACATTGTGTGGAGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767773 75 + 60714840 TTCCACTTGGAGTGATTAATCCTCACATTGCGTAGAGGCGTGTATAAACAAAAAGCTGTTTCCCATTTAGAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302866 54 - 106955855 ---------------------CTCACATTGTGTAGCGGCATGTATAAACAAAAAGCTGTTTCACATTTAGAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593143 75 + 64156825 TTCCACTTTGAGCGAGCAATCCTCACGTTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732583 75 + 59248254 TTCCACTTTGAGCGAGCAATCCTCACATTGTGTAGAGACATGTATAAACGAAAAGCTGCTTCACATTTAGAAACT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47547939 75 + 50890351 TTCCACTTTGAGCGAACAATCCTCACATTGTGTAGAGACATGTATAAACAAAAAGCTGTTCCACATTTAGAAACT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899376 75 + 49145316 TTCCACTTGGAGTGTTTAATCCTCACATTGTGTAGAGGCATGTATAAACAAAAAGCTGTTTCAGATTTAGAAACT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102627706 59 + 122678785 -------------GGTGAAATCTTGCATT---TATATATACATGAGAACAAAGGGCTGCAACAGGTTTAAACACT i canFam3.chr1 C 0 I 1798 e papAnu2.chr19 3416482 1199 - 51301725 I a score=315927.000000 s hg38.chr19_GL949753v2_alt 648687 137 + 796479 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacatggtgaaactccatctctacaaaaa s panTro4.chr19 59856637 137 + 63644993 ATTAGAAGTTCTTggccgggtgcagtggctcgtgtctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaatctgggcaacatggtgaaactccatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767848 137 + 60714840 ATTAGAAGTTCTTggccaggtgcagcggctcacgtctgtaaccccagcactttgggagactgaggcaggaggataacctaaggtcagaagtctgagaccaacctgggcaacatggtgaaaccccatctctacaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103302920 137 - 106955855 ATTAGAAGTTCTTggccgggtgcagcggctcatggctgtaaccccagcactttgggaggctgaggcaggaggataacctgaggtcaggagtctgagaccaacctgggcaacattgtgaaaccccatctctacaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593218 137 + 64156825 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55732658 137 + 59248254 Attagaagttcttggccaggcacggcggttcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatgttgaaaccccatctctacaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47548014 137 + 50890351 ATTAGAAGTTCTTggccaggcacggcggctcgtgtctgtaatcccagcactttgggaggccgaggcaggaggatcacccgaggtcaggagttcgagaccagcctgggcaacatggtgaaaccccatctctacaaaaa i chlSab2.chr6 C 0 I 1094 s calJac3.chr22 45899451 135 + 49145316 ATTAGAAGTTCCTggccaggcgcggtggctcacgtctgtaat--tggctctttgggaggccgaggcaggaggataacccgaggtcaaaagttcgagaccagcctgggcaacatggtgaaagcccatctctacaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=254.000000 s hg38.chr19_GL949753v2_alt 648824 3 + 796479 at----a s panTro4.chr19 59856774 3 + 63644993 at----a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767985 7 + 60714840 atacaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303057 7 - 106955855 atacaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60593355 3 + 64156825 at----a i rheMac3.chr19 C 0 I 870 s macFas5.chr19 55732795 3 + 59248254 at----a i macFas5.chr19 C 0 I 4 s calJac3.chr22 45899586 1 + 49145316 ------a i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I a score=65174.000000 s hg38.chr19_GL949753v2_alt 648827 106 + 796479 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggggaagccccgtctctactaaaaatacaaaaatta--gctg s panTro4.chr19 59856777 106 + 63644993 aat---------------tagct-------------------------ggggccgaggcaggcagatcgcctgaggtcaggagttcgagaccagcctggccaacatggcgaagccccgtctctactaaaaatacaaaaatta--gctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56767992 106 + 60714840 aat---------------tagct-------------------------ggggccgaggcaggcggaccgcctgaggtcaggagttcgagaccagcctggccaacatggcaaagccccgtctctactaaaaatacaaaaatta--gctg i ponAbe2.chr19 C 0 I 442 s nomLeu3.chr10 103303064 106 - 106955855 aat---------------tagct-------------------------ggggccgaggcaggtggatcgcctgaggtcaggagctcgagaccagcctggccaacatggcgaagccctgtctctactaaaaatacaaaaatta--gctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732802 148 + 59248254 aatgaaggccaggtgcagtagctcacgtctataatcccagcactttgggagtccgaggcaagagaatcacttgaggtcaggagtttgagaccagtctgggcaacatggtgaaaccccaactccacaaaaaatacaaaaattaAggccg i macFas5.chr19 I 4 C 0 s calJac3.chr22 45899587 16 + 49145316 ----------------------------------------------------------------------------------------------------------------------------------atacaaaaatta--gctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=68481.000000 s hg38.chr19_GL949753v2_alt 648933 156 + 796479 cacatggaggggcatgcttgtagtcccaggtattcgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcaccactgcactccagcctgggcaacagagcaagactccatctc------aaaagaaaaaaaaa s panTro4.chr19 59856883 156 + 63644993 cacatggaggttcatgcttgtagtcccaggtatttgggaggctgaggtaggagaatcacttgaatccaggaggcagaggttgcagtgagccgagaccgcgccactgcactccagcctgggtaacagagcaagactccgtctc------aaaagaaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303170 149 - 106955855 cacatggaggtgcacgcttgcagtcccaggtattcgggagcctgaggtaggagaatcacttgaatccaggaggcagagtttgcagtg----gagatca---------agaccatcctggctaacacggtgaaaccccatctctactaaaaatacagaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55732950 127 + 59248254 agcacagtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcac---------gaggtcag---------------gagatcg---------agaccatcctggctaacacagtgaaaccccgtctctact--aaaaatacaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45899603 155 + 49145316 ggcatggtggtgggcacctgcaatcccagctacttgagagtttgaggcaggagaattgcttaaacccgggaggtagaggctgcagtgagccaagactgcaccactgcactccagcctgg-tgacagagcaagactccgtctc------agaagaaaataaaa i calJac3.chr22 C 0 I 164 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=7831.000000 s hg38.chr19_GL949753v2_alt 649089 18 + 796479 TTCgccgggtgtggtggc s panTro4.chr19 59857039 18 + 63644993 TTTgctgggtgtggtggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303319 18 - 106955855 ttagccgggtgtggtggc i nomLeu3.chr10 C 0 I 39 s macFas5.chr19 55733077 18 + 59248254 ttagctgggcgtggtaac i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=41853.000000 s hg38.chr19_GL949753v2_alt 649107 269 + 796479 tcacgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctt-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccgggaggcagggcttgcagtgagccgagattgctgcactgcactccagcctggggaacatagcgagactgtctc- s panTro4.chr19 59857057 269 + 63644993 tcatgcctgtaatcccagcactttgggaggccgaggccgaggcgggtggatcacgaggtcaggagatcaaga-------------------------------ccatcctggctaacacggtgaaaccccgtctc-----------------tactaaaat----------------------------------------------------------------------------------------tacaaaaaactagccgggcgtggtggcaggcgcctgtagtcccagctactagggaggctgaggcaggagaatggcgtgaacccgggaggcagggcttgcagtgagccgagattgcagcactgcactccagcctggggaacatagcgagactgtctc- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55733095 402 + 59248254 gggcgcctgtagtcccagctactcgggaggctgaggc--aggagaatgg--catgaacctgggaggcggaggttccagcgagccgagattgcgccactgcactccagcctgggcgacaaagtgagactccatgtcaacaacaacaacaaaaatacaaaaaTTAGCgggggccaagacaggcaggtcacctgaggtcaggagttcgaggccagcctgaccaacatggtgaagccccgtctctactaaaaatacaaaaaattagccgggtattatggtgggtacttgtagtcccagctactcgggagactgaagcaggagaatggtgggaacccaggaggtggaggttgcagtgagccgagatcacgccactacactccagcctgggcgacacagcacgactccatct i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303337 39 - 106955855 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=1803.000000 s hg38.chr19_GL949753v2_alt 649376 9 + 796479 aaaaaaaaa s panTro4.chr19 59857326 9 + 63644993 aaaaaaaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303376 8 - 106955855 -aaaaaaga i nomLeu3.chr10 I 39 I 1 s macFas5.chr19 55733497 6 + 59248254 -aaagaa-- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56768098 442 + 60714840 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=290064.000000 s hg38.chr19_GL949753v2_alt 649385 360 + 796479 aaaaaaa-GTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacggttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctggccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcgcctaggtgacagagtgaaact s panTro4.chr19 59857335 361 + 63644993 aaaaaaaaGTCaagaagcagaggatcaggaaaaacaactaaggggtactaggcttaatacttgggtgacaaaataatctgtacaacaaactcctatgacacacagttacctgtgtaactaacctgtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAACCAAAAAAAA-------------GATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcactttcgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagacaagcctagccaagatggagaaaattccacctctactaaaaacacaagaTTAAgtcattgcactccagcacctaggtgacagagtgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768540 361 + 60714840 AAAAAAA-TTCaagaagcagaggatcaggaaaaacaactaatgggtattaggcttaatacttgggtgacaaaataatctgtaaaacaaactcctatgacacatgtttacctgtgtaactaaccggtacttgtaccTACTTTTTGGTTTGTTTTGGTAACAAAACAAAACAAAAAAAA------------TGATAGCTGGggccaggcatggtggctcatgcctgtaatcccagcacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcgagaccagcctggccaagatggagaaaattccgcctctactaaaaacacaagattaagtcattgcactccagcgtctaggtgacagagtgaaact i ponAbe2.chr19 I 442 C 0 s nomLeu3.chr10 103303385 373 - 106955855 aaaaaaa-TTCaagaagcagaggatcaggaaaaacaactaatgggtactaggcctaatacttgggtgacaaaataatctgtacaacaaactcctatgccacacatttacctgtgtaactaacctatacttgtatcTACTTTTTGGTTTGTTTTGGTaacaaaacaaaccaaaaaaaaaaaaaaaaaaaaaGATAGCTGGggccaggcatggtggctcatgcctgtaatcccaacacttttgaagaccgaggcaggcgcatcaccttaggtcaggagttcaagaccagcctggccaagatggagaaaattctgcctctactaaaaatacaagattaagccATTGCACTCCAGCGCCTAGGTGACAGAGTGAAACT i nomLeu3.chr10 I 1 M 100 s macFas5.chr19 55733503 350 + 59248254 aaaaaCA-CTCaagaagcagaggatcaggataaacaactaatggatactaggctcaatacctgggtgataa---aatctgtacaacaaactcccatgacacacgtttacctgtgtaactaacctgcaattgtacctactTTTTGGTTTGCTTTGGTAACAAACCAA---AAAAAAAA-------------GATAGCT-Gggccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcaccttaggtcagaagtttgagaccagcctggccaacatggag-aaattccacctctactaaaaacacaagattgcaccactgcactccagcg--tgggtgacagagtgaaatt i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5856.000000 s hg38.chr19_GL949753v2_alt 649745 11 + 796479 ctgtctcagaa s panTro4.chr19 59857696 11 + 63644993 ctgtctcaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768901 11 + 60714840 ctgtctcaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733853 11 + 59248254 ctgtctcaaaa i macFas5.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 45899758 164 + 49145316 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=5487.000000 s hg38.chr19_GL949753v2_alt 649756 17 + 796479 aaaataaaaa-ataaaaA s panTro4.chr19 59857707 17 + 63644993 aaaataaaaa-ataaaaA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768912 18 + 60714840 aaaaaaaaaaGGGGGGGG i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55733864 17 + 59248254 aaaaaaaaaa-aaaaaaa i macFas5.chr19 C 0 I 27 s calJac3.chr22 3198172 17 - 49145316 AATATTAAAA-ATGTAAA i calJac3.chr22 n 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=-819.000000 s hg38.chr19_GL949753v2_alt 649773 2 + 796479 AG- s panTro4.chr19 59857724 2 + 63644993 AG- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768930 2 + 60714840 AG- i ponAbe2.chr19 C 0 C 0 s calJac3.chr22 3198189 3 - 49145316 ACT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3416482 1199 - 51301725 I e macFas5.chr19 55733881 27 + 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=90560.000000 s hg38.chr19_GL949753v2_alt 649775 88 + 796479 Gggccaggtgcagcggctcatgcctataatcccagcactttggaaggccgaggcaggcaaatcacctgaggtcaggagctcgagatca s panTro4.chr19 59857726 88 + 63644993 Gggccaggtgcagcggctcacgcctataatcccagcactttggaaggccaaggcaggcaaatcacctgaggtcaggagctcgagatca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56768932 88 + 60714840 Gggccaggtgcagcggctcacgcctataatcccagcactttgggaggccgaggcaggcgaatcccctgaggtcaggagctcgagatca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468668 86 - 59248254 Gggccgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcggaacac--gaggtcaggagatcgagatca i macFas5.chr19 T 51553 C 0 s papAnu2.chr19 3417681 72 - 51301725 gggccgggtgcggtggctcacgcctgtaatcccaacactttgggaggccgagacggacggatcac--gaggtca-------------- i papAnu2.chr19 I 1199 M 70 s calJac3.chr22 3198192 86 - 49145316 Tggccaggcgcggtggctcaagcctataatcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagacca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=4645.000000 s hg38.chr19_GL949753v2_alt 649863 8 + 796479 gcctgggc s panTro4.chr19 59857814 8 + 63644993 gcctgggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769020 8 + 60714840 gcctgggc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468754 8 - 59248254 tcctggct i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198278 8 - 49145316 tcctggtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 3417753 70 - 51301725 M e rheMac3.chr19 60593358 870 + 64156825 I a score=41419.000000 s hg38.chr19_GL949753v2_alt 649871 40 + 796479 aacacggtgaaaacctgtctgtgctaaaagtac--aaaatta s panTro4.chr19 59857822 40 + 63644993 aacacggtgaaaacctgtctctgctaaaagtac--aaaatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769028 40 + 60714840 aacacagtgaaaacctgtctctactaaaaatac--aaaatta i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468762 42 - 59248254 aacacagtgaaaccccgtctctactaaaaacacaaaaaatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3417824 42 - 51301725 aacacagtgaaaccccgtctttaataaaaacacaaaaaatta i papAnu2.chr19 M 70 I 1583 s calJac3.chr22 3198286 41 - 49145316 aacatggtgaaaccctgtctctactaaaaatac-aaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=65453.000000 s hg38.chr19_GL949753v2_alt 649911 65 + 796479 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt s panTro4.chr19 59857862 65 + 63644993 gccgggcaaggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769068 65 + 60714840 gcctggcaaggtggcacatgcctgtaatcccagctactcaggaggctgaggcagaagaattgctt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468804 65 - 59248254 gctgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaaccaggagaatggcat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839236 65 + 51301725 gccaggcatggtggttcatgcctgtaatcccagcacttttgaaggccaaggcgggtgcatcacct i papAnu2.chr19 I 5286 I 61 s calJac3.chr22 3198327 65 - 49145316 gctgggcacggtggtgcgtgcctgtagtcccagctcctcaggaggctgaggcaggagaattgctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=18681.000000 s hg38.chr19_GL949753v2_alt 649976 29 + 796479 gaacctgggaggtggaggatgc-agtgagc s panTro4.chr19 59857927 29 + 63644993 gaacctgggaggtggaggatgc-agcgagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769133 29 + 60714840 caacctgggaggcggaggatgc-ggtgagc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468869 30 - 59248254 gaacccgggaggtggaacttgcaagtgagc i macFas5.chr19 C 0 C 0 s calJac3.chr22 3198392 29 - 49145316 gaccccaggaggcggaggttgc-ggtgagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839301 61 + 51301725 I e rheMac3.chr19 60593358 870 + 64156825 I a score=51543.000000 s hg38.chr19_GL949753v2_alt 650005 54 + 796479 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca s panTro4.chr19 59857956 54 + 63644993 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769162 54 + 60714840 tgagatcgcgccattgcactccagcc--------tgggcaacaagagtaaatctccgtctca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 3468899 60 - 59248254 cgagattgtgccactgcactccagcactccagcctgggcgtca--agtgagactccatctca i macFas5.chr19 C 0 I 67842 s papAnu2.chr19 47839362 53 + 51301725 caagattgcaccactgcactccagcg--------tgggtgaca-gagtgaaattctgtctca i papAnu2.chr19 I 61 I 2 s calJac3.chr22 3198421 54 - 49145316 cgagatcgagccattgcactccagcc--------tgggtaacaagggtgaaactctgtctca i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e rheMac3.chr19 60593358 870 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 650059 2 + 796479 cc s panTro4.chr19 59858010 2 + 63644993 cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769216 2 + 60714840 cc i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e calJac3.chr22 3198475 0 - 49145316 C e nomLeu3.chr10 103303758 100 - 106955855 M e chlSab2.chr6 47548151 1094 + 50890351 I e papAnu2.chr19 47839415 2 + 51301725 I e macFas5.chr19 3468959 67842 - 59248254 I e rheMac3.chr19 60593358 870 + 64156825 I a score=32876.000000 s hg38.chr19_GL949753v2_alt 650061 18 + 796479 aaaaaaaaaaaaaaaaaa s panTro4.chr19 59858012 18 + 63644993 aaaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769218 18 + 60714840 aaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303861 18 - 106955855 AAAaaaaaaaaaaaaaaa i nomLeu3.chr10 M 100 C 0 s rheMac3.chr19 60594228 18 + 64156825 aaagaaaagaaaagaaga i rheMac3.chr19 I 870 C 0 s papAnu2.chr19 47839417 18 + 51301725 aaaaaaagaaagaaaaga i papAnu2.chr19 I 2 I 8 s chlSab2.chr6 47549245 18 + 50890351 aaaagaaagaaaagaaga i chlSab2.chr6 I 1094 C 0 s calJac3.chr22 3198475 14 - 49145316 ----aaaaaaaaaaaagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e macFas5.chr19 3468959 67842 - 59248254 I a score=7212.000000 s hg38.chr19_GL949753v2_alt 650079 3 + 796479 aaa s panTro4.chr19 59858030 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769236 3 + 60714840 gac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303879 3 - 106955855 aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594246 3 + 64156825 aaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733908 3 + 59248254 aaa i macFas5.chr19 I 27 C 0 s papAnu2.chr19 47839443 3 + 51301725 aaa i papAnu2.chr19 I 8 C 0 s chlSab2.chr6 47549263 3 + 50890351 aaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3198489 3 - 49145316 aaa i calJac3.chr22 C 0 I 39388 e canFam3.chr1 102627765 1798 + 122678785 I a score=11547.000000 s hg38.chr19_GL949753v2_alt 650082 8 + 796479 --gaCagctg s panTro4.chr19 59858033 10 + 63644993 aagaCagctg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303882 8 - 106955855 --gacagctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594249 8 + 64156825 --catagctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733911 8 + 59248254 --catagctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839446 8 + 51301725 --catagctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549266 8 + 50890351 --gatagctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C e calJac3.chr22 3198492 39388 - 49145316 I a score=100053.000000 s hg38.chr19_GL949753v2_alt 650090 53 + 796479 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac s panTro4.chr19 59858043 53 + 63644993 gaaaatccccaaatacatggagatgaaacagcacatttccaaatt---------taaaaaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103303890 53 - 106955855 gaaaatccccaaatacatggagatgaaacagcacatttccaaatT---------TAAAAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594257 56 + 64156825 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT------AAAAAAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733919 55 + 59248254 gaaaatccccaaatccatggagatgaaacaacacatttctaaatT-------TAAAAAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839454 55 + 51301725 gaaaatccccaaatCCATGGAGATgaaacaacacatttctaaatt-------aaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549274 62 + 50890351 gaaaatccccaaatccatggagatgaaacaacacatttctaaatTTaaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899922 51 + 49145316 gaaaaCCCCCCAAAACATGGAGATGAAACAACACATTTCTATACT-----------TATTTT i calJac3.chr22 I 164 C 0 e canFam3.chr1 102627765 1798 + 122678785 I e ponAbe2.chr19 56769239 0 + 60714840 C a score=814675.000000 s hg38.chr19_GL949753v2_alt 650143 242 + 796479 aaaagtacaagaagCTTAGTCATCGTTCA-GGGTCTTCCTTGCA-AGATGAGCTTCTACTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCCAGAAACTTGAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCTGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA s panTro4.chr19 59858096 242 + 63644993 aaaagtacaagaagCTTAGTCATGGTTCA-GGGTCTTCCTTGCA-AGATGAGATTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACATGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGAGCCCAGGTCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769239 234 + 60714840 ---------agaaGCTTAGTCATGGTTCAGGGGTCTTCCTTGCA-AGATGAGCTTCTGCTTACACCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCCAGAAACTTCAGGTTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCAAAGAGAGCGAAGATCCTGCCGAGCCCAGTTCGGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103303943 242 - 106955855 AAAAGTACAGGAAGCTTAGTCACGGTTCA-GGGTCTTCCTTGAA-AGATGGGCTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTACGTGGTCACAAAGAATCCGCACAGAAAAGTCGCTCAGGAAGCTTTGTTTCACTTTCAGAAACTTCAGGTTGCTATTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCCGCGCCCAGTTCGGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594313 242 + 64156825 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGGCAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55733974 242 + 59248254 AAAAGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCCTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839509 242 + 51301725 aaaagtgcaagaagCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCGCTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549336 242 + 50890351 aaaaGTGCAAGAAGCTGAGTCATGGTTCA-GGGTCTCCCTTGCA-AGATGAGTTTCTGCTTACTCCACTTTCTGCAGATGACAGGTGCTACGGGTTATGTGGTCACAAAGAATCCGCACAGAAGAGTCACTCAGGAAGCTTTGTTTCACTTCTAGAAACTTCAGATTGCTGTTTGAGCTGAAGAGAGAGCAGAAATCCGTCCAGAGGCGAAGAGAGCGAAGATCCTGCTGAGCCCAGCTGGGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45899973 242 + 49145316 TAAAGTGCAAGGAGCTTAGTCATGGTTCA-GGATCTTCCCTGCA-AGAGGAGCTTCTCCTTACTCTGCTTTCTGCAGGTGACAGGTGTTACGGACTATGTGGTCACAAAGAACCCGCACGGACGACTCGCTCAGGAAGCTTTGTCTCACTTCCAGAAACTTCAGATTGCTGTTCAAGCTGACGAGAGAGCAGAAATCCTTCCAGACGTGAAGGGACTGAAGATCCTGCCGCGCCCAGTTTGGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102629563 243 + 122678785 AAAAATGTAAGGAGCTTGGTTATGCCCTA-GGGGTTTTCATCCAGGGGTTAGCTTCTACTTACACCACTTTCTGAAGATTATGGGTAGCAGAGGTTATTTTTTCACAGAGAATTCTCACAGATGAGGCACTAAGGAAGCTCTGACTGATGTCTAGAAATATCAGGTTTTTATTTGAGTCAAACATGGAACAGAAGTCTATCCAGAAAGGAAGCACGTGTTGATCATTCTGGGACCTGTTGGGAA i canFam3.chr1 I 1798 I 1947 a score=208830.000000 s hg38.chr19_GL949753v2_alt 650385 90 + 796479 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCATCTCTTAGGACTAGTACCTGCATGGTGAGATGGGCATCTGCAAACCACAttt s panTro4.chr19 59858338 90 + 63644993 TGGTTAGGTAAGTGCACCTGCAGGAGAACACACGTTCCTCTCTTAGGACTAGTACCTGCATGGCGAGATGGGCGTCTGcaaaccacattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769473 90 + 60714840 TGGTTAGGTAAGTGCACCTGCAGTAGAACACACGTTCATCTCTTATGACTAGTACCTGCATGGTGAGATGGGTGTCTGcaaaccacattt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304185 90 - 106955855 TGGTCAGGTAAGTGCACCTGCAAGAGAACACATGTTCATCTCTTATGACTAGTACCTGCATGGCGAGATGGGTGTCTGCAAACCACACtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594555 90 + 64156825 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGcaaaccacattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734216 90 + 59248254 GCGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGGGTCTGCAAACCACAttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839751 90 + 51301725 GGGTTACGTAGCTGCACCTGCGGGAGGACACACATTCGTCTCCTATGCCTAGTACCTGCGTCGGGGGACGGGTGTCTGCAAACCAcattt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549578 90 + 50890351 GGGTTACGTAGGTGCACCTGCGGGAGAACACACGTTCGTCTCCTATGCCTAGTACCTGCGTCAGGGGACGGGTGTCTGCAAACCACAttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45900215 73 + 49145316 GGGTGAAGTAACTGTCCCTGCGGGAGCGCACA-GTT---------------GTCACCGCAT-GTGGGATGGGTGACTGCAAACCACtttt i calJac3.chr22 C 0 I 2278 e canFam3.chr1 102629806 1947 + 122678785 I a score=264314.000000 s hg38.chr19_GL949753v2_alt 650475 110 + 796479 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATGCTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA s panTro4.chr19 59858428 110 + 63644993 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769563 110 + 60714840 caacggcaaaaaccacaattacttttgcaccagcctaaAACAGTGTCGATAGTAAACAATATTGCATCACATACTTTGCTACCAGTATAGATCTTAAGTTTTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304275 108 - 106955855 caatggcaaaaaccacaattacttttgcaccaacctaaA--Agtgtctatagtaaacaatattgcatcacatactttgctacgagtatagatcttaagttttacaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594645 110 + 64156825 cagtggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55734306 110 + 59248254 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAGCAATATTGAATCACATACTGTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i macFas5.chr19 C 0 I 810 s papAnu2.chr19 47839841 110 + 51301725 caatggcaaaaaccacaattacttttgcaccaacctaaaacAGTGTCTATAGTAAGCAATATTGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTtttacaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549668 110 + 50890351 caatggcaaaaaccacaattacttttgcaccaacctaaAACAGTGTCTATAGTAAACAATATGGAATCACATACTTTGCTAGGAGTATAGATCTTAAGTTTTACAAAAAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I a score=1179.000000 s hg38.chr19_GL949753v2_alt 650585 1 + 796479 A s panTro4.chr19 59858538 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769673 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304383 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60594755 1 + 64156825 A i rheMac3.chr19 C 0 I 1213 s papAnu2.chr19 47839951 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549778 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I a score=8948.000000 s hg38.chr19_GL949753v2_alt 650586 8 + 796479 ATAAAATA s panTro4.chr19 59858539 7 + 63644993 -TAAAATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769674 7 + 60714840 -TAAGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304384 7 - 106955855 -tAAAATA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47839952 8 + 51301725 ataaaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47549779 8 + 50890351 ATAAAATA i chlSab2.chr6 C 0 I 732 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=4422.000000 s hg38.chr19_GL949753v2_alt 650594 8 + 796479 ATAGATAA s panTro4.chr19 59858546 8 + 63644993 ATAGATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769681 8 + 60714840 ATAGATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304391 8 - 106955855 ATAGATAA i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e papAnu2.chr19 47839960 0 + 51301725 C e macFas5.chr19 55734416 810 + 59248254 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=21077.000000 s hg38.chr19_GL949753v2_alt 650602 20 + 796479 ggctgagtgaggtggctcat s panTro4.chr19 59858554 20 + 63644993 GCctgagtgaggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769689 20 + 60714840 ggctgagtgaggtggctcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304399 20 - 106955855 ggctgagtgaggtggctcat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735226 20 + 59248254 ggccgggcgcggtggctcac i macFas5.chr19 I 810 C 0 s papAnu2.chr19 47839960 19 + 51301725 -gccaggtgtggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e calJac3.chr22 45900288 2278 + 49145316 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=280811.000000 s hg38.chr19_GL949753v2_alt 650622 245 + 796479 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-caacttgggctagaaactgaga-cccccatctctac-aaaaaaat--aaaataattaa-ccgggcaaggtggtgcacgcccatagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcgcgccactgcactccagcctggggga s panTro4.chr19 59858574 245 + 63644993 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatctcttgagcccaggagtttaagac-cagcctgggctagaaactgaga-cccccatctctcc-aaaaaaat--aaaataattaa-ctgggcaaggtggtgcacgcccgtagtcccagctactggggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcacgccactgcactccagcctggggga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769709 244 + 60714840 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctggacaagaaactgaga-cccccatctctac--aaaacat--aaaataattaa-ccgggcaaggtggtgcacgcccgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggagcttgcagtgagccaagatcatgccactgcactccagactgggcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304419 245 - 106955855 gcc-----tgtaatcccaacactttgctaggccaaagtgggaagatcacttgagcccaggagtttaagac-cagcctgggaaagaaactgagaccccccatctccac--agaaaat--aaaataattaa-ccgggcaacatggtgcacgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735246 233 + 59248254 gcc-----tgtaatcccagcactttgggaggccgaggcgggcggatcac--aaggtcaggagatcgagac-------------cacggtgaaa-cc-ccgtctctactaaaaatacaaaaaaaaattag-ccgggcgcggttgtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47839979 215 + 51301725 accctccttggcctctcagcactttgggaggccgaggcgggcagatcac--aaggtcaggagattgagactcatcctggctaacacagtgaaa-cctccgtctctactaaaaatac--aagaaaattagtctgggcgtggtgacgggcgtctgtagtcccagctactcgcgag----------------------------------agagcttgcagtgagcagagat-gcg-cactgcactctagcctgggtga i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902566 228 + 49145316 gcc-----tgtaatcccagcacttt------cagaagcaggga-----cctgaggtcaggag----agac-cagcctggccaacgtgatgaaa-ccccc-tctctat--taataat--acaaaaattag-ctgggcgcggtggctcatgcctgtaatcccagctactaatgaggccggggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcatgccattgcacttcagcctgggtga i calJac3.chr22 I 2278 C 0 e canFam3.chr1 102629806 1947 + 122678785 I e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=28850.000000 s hg38.chr19_GL949753v2_alt 650867 19 + 796479 c-agagcgagactccgtctc s panTro4.chr19 59858819 19 + 63644993 c-agagcgagactccgtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56769953 19 + 60714840 c-agagcgagactccgtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304664 19 - 106955855 c-agagcgagactccgtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735479 19 + 59248254 c-agagcgagactccgtctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47840194 18 + 51301725 c-agagc-agactctgtctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45902794 18 + 49145316 ctagagcaaaact--gtctc i calJac3.chr22 C 0 I 7 s canFam3.chr1 102631753 19 + 122678785 C-AAAACAAGGTCTGGTTCC i canFam3.chr1 I 1947 C 0 e chlSab2.chr6 47549787 732 + 50890351 I e rheMac3.chr19 60594756 1213 + 64156825 I a score=23841.000000 s hg38.chr19_GL949753v2_alt 650886 11 + 796479 aaaaataaaaa s panTro4.chr19 59858838 11 + 63644993 aaaaaaaaaaa i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56769972 11 + 60714840 agaaaaaaaaa i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103304683 11 - 106955855 aaaaaaaaaaa i nomLeu3.chr10 C 0 I 5 s macFas5.chr19 55735498 11 + 59248254 aaaaaaaataa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47840212 11 + 51301725 aaaaaaaaaaa i papAnu2.chr19 C 0 M 1271 s chlSab2.chr6 47550519 11 + 50890351 aaaaaaaaaaa i chlSab2.chr6 I 732 C 0 s calJac3.chr22 45902819 11 + 49145316 aaaaaaaaaaa i calJac3.chr22 I 7 I 3 s canFam3.chr1 102631772 7 + 122678785 --AAAGAAA-- i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=348909.000000 s hg38.chr19_GL949753v2_alt 650897 211 + 796479 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-ATGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGCGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT s panTro4.chr19 59858851 211 + 63644993 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAATTCTGACAGTAAGTGACAGGGCAAAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTTTCAAATTCAATGTCCAGTTCAAAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56769988 209 + 60714840 GCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCACGTTGAAC-GTGAAGCT---GGAAAGAAGTCCAGCCAGAGGGAAAT--TGACAGTAAGCGACAGGGCAAAGGAGACG--CAGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCCAGTTCAGAATCCATGTAATTCTCCAGGAACACCCCCTTTGCT i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103304699 211 - 106955855 aCCCCAATTCCTAATTGCCAAGTCGTG-TCTCCGCGTTGAAC-GTGAAGCT---GGAAGGAAGTCCAGCCAGAGGGAAATTCTGACCGTTAGCGACAGGGCACAGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------AATGGGAAAGCA-----------------------GTTCTTACCTCTCAAATTCAATATCCGGTTCAAAACCCACGTAATTCTCCAGGAACACCCCCTTTGCT i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55735520 181 + 59248254 -------------------aaat-------------taaaaaaataaaaaa---ataaGAAAGTCCAGCCAGAGGGAAATTGTGACCGTCAGCCACAGGGCACAGGAGACG--CCGGCCTCTTCCTAGTGGAGCG---TGG------------------GTTGGGAAAACA-----------------------GTCCTTACCTCTCAAATTCAATGTCTGCTTCGAAATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i macFas5.chr19 I 11 C 0 s papAnu2.chr19 3419449 180 - 51301725 ------------------------------------------------------aaaaaagagtccaaaaAGAGGGAATTCCTGACCCTAAGCCACAGCACATAGGAGGCT--CTGGCCTCTTCCTAAGGGCGCA---TGGGATGAGGCTAAACGACCAGTCGAGTGAAAG-----------------------GTTCCTACCTCTCAGCCTCAGCATTGGATTCAGACGCAGCGACATTCTCCGGGAGCGTCTCCTTTCTT i papAnu2.chr19 I 1583 I 3 s chlSab2.chr6 47550530 205 + 50890351 GCCCCAATTCCTAATTGTCAAATCGCG-TCTCCGTGTTGAACTGTGAAGCT---GGAAGAAAGTCCAGCCAGAGGGAAATTCTGACCGTCAGCCAC-------AGGAGACG--CTGGCCTCTTCCTAGTGGAGCG---TGG------------------GATGGGAAAACA-----------------------GTTCTTACCTCTCAAATTCAATGTCTGGTTCGATATCCACGTAATTCTCCAGGAACACCCCCTTTGCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45902833 207 + 49145316 aaCCCAATTCCTAATTGACAAATCGTA-TCTGTGTGTTGAAC-ATGAAGC-------AGGAAGACCAGCCAGAGGGAAATTCTGACCTTAAGCTACAAGGCACAGGAGACA--CTGGCCTCCTCCTGGTGGAACG---TGG------------------GATGGGAAAGTC-----------------------GTTCTTACCTCTCTAACTCCAAGTCCGGTTCAAGGTCCACGTAATTCTCCAGGAACACCCCCTTTGCT i calJac3.chr22 I 3 C 0 s canFam3.chr1 102631779 243 + 122678785 GATCCCATCCCTAATCCGAACATTGTGTTCCCCACCTTGAAG-AGCAAGCTAGCAGAAGAAATTCTGGCAAGAAGAAAATTCTGATCCTATGCCAAGGGAGCGGGGGGACACTCTGCCCTGTTTCTAACGCAGGGGATGAG------------------GCTGAAAAAGCAAGCTAACAGAGTGAACAGTGAGGATTCTTACCGGTCAGCCTGGTCCTCTGATTCTGACACAGCATCATTCTCCAGAAACATCCCCTTTTCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60594756 1213 + 64156825 I a score=125033.000000 s hg38.chr19_GL949753v2_alt 651108 38 + 796479 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT s panTro4.chr19 59859062 38 + 63644993 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770197 38 + 60714840 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304910 38 - 106955855 ACCTGCAGTGAGAGTTTCTGCAAGTCTTGACAATGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60595969 38 + 64156825 ACCTGCAGTGACATTTTCTGCAAGTTTTGACAGTGCTT i rheMac3.chr19 I 1213 I 49 s macFas5.chr19 55735701 38 + 59248254 ATCTGCAGTGAGACTTTCTCCAAGTCTCGACAATGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419632 38 - 51301725 ACCTGCAGTGACATTTTCTCCAAGTTTGGACAGTGCTT i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47550735 38 + 50890351 ACCTGCAGTGAGACTTTCTCCAAGTCTGGACACTGCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903040 38 + 49145316 ACCTGCAGCGAGAGTTTCTCCAAGTCTGGACAGTGCTT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632022 38 + 122678785 ATCTGCAGCCACATTTTCTGCAAGCTTTCACAATGCTT i canFam3.chr1 C 0 C 0 a score=88309.000000 s hg38.chr19_GL949753v2_alt 651146 52 + 796479 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAGGTGAATAGAA s panTro4.chr19 59859100 52 + 63644993 CAGGCTGAAGGAACAATGCCTCACTTCAGAAGTATTTGTCAGGTGAATAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770235 52 + 60714840 CAGGCTGAAGGAACAATGCATCACTTCAGAAGTATTTGTCAAGTGAATAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103304948 52 - 106955855 CAGGCTGAAGGAACACTGCATCATTTCAGAAATATTTGTCAAGTGAACAGAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735739 52 + 59248254 CAGGCTGAAGGAACAGTGCATCATTTCAGAAGTATTTGTCAAGTTAATAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419670 49 - 51301725 GAAGCAGAATGATGACGGCGCAATGTCTACTGCATTT---AAGTGCAGGGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550773 52 + 50890351 CAGGCTGAAGGAACAGTGCATGATTTCAGAAGTATTTGCCAACTTAATAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903078 52 + 49145316 CAGGCTGAAATAACACTGCACCATCTCAGACTTACTTGTCAAGTGAACAGAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632060 52 + 122678785 GAGGCAAAAGGATGCATGCATGATGTCTGAGGTATCTTTGAAAACCAGGGAC i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596007 49 + 64156825 I a score=209419.000000 s hg38.chr19_GL949753v2_alt 651198 64 + 796479 ATTTCCTTGAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC s panTro4.chr19 59859152 64 + 63644993 ATTTCCTTCAACGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770287 64 + 60714840 ATTTCCTTGAAAGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305000 64 - 106955855 ATTTCCTTGAACGGGGCCACTACGACCTTCGCCAGCTCCTCCTCCTGAGACTCATACAGGCAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596056 64 + 64156825 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i rheMac3.chr19 I 49 I 55 s macFas5.chr19 55735791 64 + 59248254 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419719 64 - 51301725 ATTTCTTTGAACTGAGCCATCACCTCCTTCACCAGCTCGTCCTCCTGAGACTCGTACAGACAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550825 64 + 50890351 ATTTTCTTGAGCGGGGCCACCACCACCTTCGCCAGCTCCTCCTCCTGAGACTCGTACAGGCAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903130 64 + 49145316 ATTTCCCTGAACGGGGCCATCACCGCCTTCGTCAGCTCCCCCTCCTGAGACTCATACAGGCAGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632112 64 + 122678785 ACTTCTGTCACCTGGACCATGGCTTCCTTCACAAGCTGCTCCTCCTGGGATTCATAGAGACAGT i canFam3.chr1 C 0 C 0 a score=95886.000000 s hg38.chr19_GL949753v2_alt 651262 58 + 796479 CCAAGACCTCCTTCAGGTCGGTCAC---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT s panTro4.chr19 59859216 58 + 63644993 CCAAGACCTCCCTCAGGTCGGTCAC---GGATAAGGACTTATTTGCATGAAGATGTGCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770351 58 + 60714840 CCAAGACTTCCTTCAGGTCGGTCAT---GGATAAGGGCTTATTTGCATGAAGATGTGCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305064 58 - 106955855 ACAAGACCTCCTTCAGGTCGGTCAT---GGATATGGACTTATTTGCATGAAGATGTGCTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55735855 58 + 59248254 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATCGGCATGAAGACTGGCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419783 55 - 51301725 AGAGGAGCTCCTTCAGGTCCGCCAC---CGTGGAATGTCCATTCTTACGACTTATGTC--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47550889 58 + 50890351 ACAAGACCTCCTTCAGGTCTGTCAT---GGATAAGGGCTTATTGGCATGAAGATTGGCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903194 58 + 49145316 ACAAGAGCTCCCTCAGGCCTGCCAT---CGACGACGGCTTCTTTACGTGAAGATTCGCTCT i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632176 61 + 122678785 GCAAAGTCTCCTTCGTGTCTGTCACCGAGGAGAAGGGTCTGTTCTCAGGAGACCCTACCCT i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60596120 55 + 64156825 I a score=175702.000000 s hg38.chr19_GL949753v2_alt 651320 52 + 796479 GCATTGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG s panTro4.chr19 59859274 52 + 63644993 GCACCGCAGCAATTCCTGTTTGATGTCCGGTGACATCCGGCAGCCAAAAGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770409 52 + 60714840 GCATCGCAGTAATTCCTGTTTGATGTCTGGTGATATCCGGCAGCCAAAAGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305122 52 - 106955855 GCATCGCAGCAACTCCTGTTTGATGTCTGGTGACATCTGGCAGCCAAAAGTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60596175 52 + 64156825 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGCCAGCCAAAGGTG i rheMac3.chr19 I 55 C 0 s macFas5.chr19 55735913 52 + 59248254 GCATCGCAGCAATTCCTGTTTGATCTCCGGTGACATCTGGCAGCCAAAAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3419838 52 - 51301725 GCATCGCAGCAATTCCTGTTTGATCTCTGGTGACATCCGGCAGCCAAAGGTG i papAnu2.chr19 C 0 I 48039 s chlSab2.chr6 47550947 52 + 50890351 GCATCGCAGTAATTCCTGTTTGATCTCCGGTGACATCCGGCAGCCAAAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903252 52 + 49145316 GCACCGCAGCAGTTCCTGTTTGATCTCCCGTGACATCACGCAGCCGAAAGTG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632237 52 + 122678785 GCATTCCAGCAGTTCCTGCTTGACCTTGGTGGACACCAGGCAGCCAAAAGTC i canFam3.chr1 C 0 C 0 a score=3698472.000000 s hg38.chr19_GL949753v2_alt 651372 1051 + 796479 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCGATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCCCCCTCCTCCTTCTCCAGGGCGTAGAACAGGGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAACGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACAATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAAGGCTGCCCTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGAGCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG s panTro4.chr19 59859326 1051 + 63644993 GCCTCCAACTCCTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTTCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGTACGTCCCCAATGTCCGAGGTGTGG-CCGTCCCT--------GTCCTCCTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGGAGGCTCAGCGTCCGCAGCGCGCCCCGCAGCTGTG------------CGCCCTGCGGG------AACCGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATTAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTACGTAGATCGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56770461 1048 + 60714840 GCCTCCAACTCGTTGGCTCTCTTCTCGTTAGCGAGGCCGAATAAGAAGTGTCCTACTTGGATCAGGTCGGGGTTCCTGACTCTTTCTTCTCCGGAAAGCAGCTTCTGTATGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCCCAGCGAAAAACTGCTGGACGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGAAGGATGTCTCCGTCCAGGAACAGACGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTTGGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCGGCCAGAAAGCTCAGCGTCCGCAGCGCGCCCTGCAGCTGTG------------CGCCCTGTGGG------AACCGGCTGCAGAGGAAGCGCAAGAACAGCCCCGTGCGGGTGAGGCAGGTGGGGACCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGGGCCGACCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGGAGGTCCCTCAGTGCCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATATACCTGTTCAGCAAACTCCCCAGGAGGACGGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCTTCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAACTCAGGCCAGTCTTTGGAGATTAGCTCTGCAAAACTGCACGGGCCCATGTGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103305174 1051 - 106955855 GCCTCCAGCTCCTTGGCTCTCTTCTCATTAGCGAGGCCGAATAAGAAGTGTCCTACTTGAATCAGGTCGGGGTCCTTGAGTCTTTCTTCTCCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCTCTTCCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGCGAAAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGAGTCTCTGTCCTGGCGGAGGATGTGTCCGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAGCCTTTCCAGGTCCTCTCGGTGGAGCACAGACATCTGCGCCCACAGCCCCTGCGCGGCCAGGAGGCTCAGCTTCCGCAGCGCGCCCCGCAGCTGTC------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCGGGTGAGGCAAGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCCGGGGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAAGCCCTCCACCCTTATGTAGATTGGCTGCTGCGCCAGGAGCTGTAGATCCCTCAGTACCCTGGGCCGCGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTTCTTCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGAACTTTCAGCTCATCAAGGCCATCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCAGGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAACGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGCG i nomLeu3.chr10 C 0 M 207 s rheMac3.chr19 60596227 1051 + 64156825 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGCGTCCTGCCTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55735965 1051 + 59248254 GCCTCCAACTCCTTGACTCTCTTCTCATTAGCCAGGCCGAACAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGA-CCGTCCCT--------GtcctcctcctcctcctcctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCCTTTGGCGACTCCGTCCTGGCGGAGGATGTTTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAGCTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCTCCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGGCAGTCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47841511 1048 + 51301725 GCCTCCAACTCCTTGACTCTC-TCTCATTAG-CAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGGCCCgtccct--------gtcctcctcctcct--ttctgcaGGGCGTAGAACAGCGCAGTGAGAAACtgctggaagctgaggtggatgaaGGAGTAGCAGCCTTTGGAGACTCTGTCCTGGCGGAGGATGTCTCTGTCCAGGAACAGGCGGAGGTCGGACTCCTGCACCCCGGCCCTTTCCAGGTCCTCTCCGTGGAGCACGGACATCTGCGCCCACAAACCCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGCGCGCCCCAGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAGCGCAGGAACAGCCCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCCTTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCACACCGCGGGTGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCGTCTCCGAAGTGTCTCAGGAAATAGGCCCTCCTGTCCGACTCCAGGAACCCCTCCACCCTTATGTAGGTGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCTGCTGCGTCCAGTCCCCGCAGATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCGAGGCCGTCGACCACGAACAGGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCCCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCATCGGGCTGAGGTTGCAGTCTGTCCAGTCCAGCATACACTTTTTGGCCAGTG i papAnu2.chr19 M 1271 C 0 s chlSab2.chr6 47550999 1051 + 50890351 GCCTCCAACTCCTTCACTCTCTTCTCATTAGCCAGGCCGAATAAGAAGTGCCCTACTTGGATCAGGTCGGGGTTCTTGAGTCTTTCTTCTTCGGAAAGCAGCTTCTGCACGTCCCCAATGTCCCAGGCATGG-CCGTCCCT--------GtcctcctcctcctccttctccAGGGCGTAGAACAGCGCAGTGAGAAACTGCTGGAAGCTGAGGTGGATGAAGGAGTAGCAGCTTTTGGAGACTCTGTCCTGGTGGAGGATGTCTCTGTCCAGGAACGGACGGAGGTCGGACTCCTGCACCCCAGCGCTTTCCAGGTCCTCTCTGTGGAGCACGGACATCTGCGCCCACAAACTCTGCGCGGCCAGGAGGCTCAGCGCCCGCAGAGCGCCCCGGAGCTGTG------------CGCCCTGCGGG------AACTGGCTGCAGAGGAAACGCAGGAACAGCTCCGTGCTGGTGAGGCAGGTGGGGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGAGTCGTGCACACGATCCAGCATACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTCCTCATCAACTCAAAGGCACGCATGGCTTGGTCCTCCTCTCCAAAGTGTCTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCTTCCACCCTTATGTAGATGGGCTGCTGCACCAGGAGCTGGAGGTCCCTCAGGGCCCTGGGCCGCGTGGTGACCAGCAGGGTTGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAAGAGGACCGGCACCGGCTTCTGCTGCTTCCAGTCCCCGCATATGTCCTGGATCAGCG------CCCCAGGTGGGACTTTCAGCTCATCAAGGCCGTCGACCACGAACAAGATTCTCTGTGCTTGGGCTAGGATGCTTGGAATGTCATCCTGCAATTCAGGCCAGTCTTTGGAGATCAGCTCTGCAAAACTGCACGGGCGCATGCGGCTGAGCTCCTTGCAGCTGAGGTAGAAAGCGTATCTGACCGTCGGGCTGAGGTTGCAGTCTGACCAGTCCAGCATACACTTTTTGGCCAGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45903304 1048 + 49145316 GTCTCCAACTCCGCGGCTCTCTTCTCGTTGGCAAGGCCGAATAAGAAGTGTCCCGCTTGGATCAGGTCGGGGTTCTGGACTCTTTCTTCTCCAGAAAGCAGCCTCTGCACATCCCCAATGTCCCAGGCGTGG-CCGTCCCT--------GTCCT---CCTCCTCCTTCTCCAGGGCGTAGAACAGCGCAGTGAAAAACTGCTGGAAGCTGAGGTGGAGGAAGGAGTAGCAGTCTTTAGAGTCTCTATCCTGGCGGAGGATGCCTCTGTCCAGGAACGGGCGGAGGTCGGACTCCTGCACCCCGAAGCTCTCCAGGTCCTCTCTGTGGAACACGGACATCTGCGCCCACAGGCCCTGCGCAGCCAGGATGCTCAGCGCCCGCAGCGTGCCCCCGAGCTGTG------------CACCCTTCGGG------AAGCGGCTGCAGAGAAAGTGCAGGAACAGCCCCGTGCAGGTGTGGCAGGTGGTGGCCGGGTCCTCCCCATTCTCCATCTGCAGCTTCAGACTCGTGCACACCATCCAGCACACCGCGGGCGCCGAGCCCAGCTGGAACAGGGCCGCGTTGCTTCTCATCAGCTCAAAGGCACGCGTGGCTTGGTCCTCCTCTCCAAAGTGTGTCAGGAAATAGGCCCTCCTGTCCTCCTCCAGGAACCCCTCCACCCTTATGTAGATGGGCTTCTCGGCCAGGAGCTGCAGGTCCCTCAGGGACCTGGGCCGTGTGGTGACCAGCAGGGCGGCCTTGGGTAACATCTTCCTCTTCAGCAAACTCCCCAGGAGGACCGGCACCGGCTTCGGCTTCAGCCAGTCCCCGCAGATGTCGTAGATCAGCG------CCCCGGGGGGCACTCTCAGCTCATCGAGGCCGTCGACCACAATCAGGATTCTCTGTGCTTGGGCGAGGATGTCTGGAATGTCATCCTGCAATTCCGGCTGGTCTCTGGCGATCAGCTCTGCAAAACTGCACGGGCCCAGCCGGCTGAGCCCCTTGCAGCTGAGGTAGAAAGCGTACCTGGCCTTTGGGCCGAGGTTGTAGTCTTTCCAGTCCAGCATACACTTCTTGGCCAGCG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102632289 1081 + 122678785 ATCCCCAGCTCCCTGGCCCTCTTTTCATTGGTGAGGCCAAATAGGAAGTGCCCCACGGGGGCTAGGTAGGGGTTCTTGAGTCCTTCTTCCTTGGAGAGGAGCCTCTGCACATTCCCAGCATCCCAGCTAGGG-C--TTCCTGCTGGAAGGTCTTGGTGGTCCTGGCTCCCCAGAATGTAGAGGGCAGCGGCCAGGAACTGCTGGACACTCAGGTGGAGGAAGCAGTAGCAGCCCTCACAGTCTCTGCTCTTCTGGAGGATATTCCTGTTCAGGAAAGGGTGCAGGTCAGACTCATGCACACCCAGCCTGAGCAGGTCATGTCCATCAAACACTGAGGTCTGTGTCCACACGCCCTCAGTGGCCAGCAGGCACAGAGCGTGCAGAGTAGACCTGAGGTGCAGCCCCAGACAGCTGCCCTGCGCGGGCGCAAACTGGCTGCAGAGGAAACGCAGCAACAACGATGTGGTGGTCTGGCAGGTGGGGCCAGGGTCCTCACCCTCGTCCATCTGCAGCTTCAGGCAGGTGCACACCATCCAGCACACAGCGGGTGCCGCGCCCATTTGGAACAGCGTTGCATTGCTCTTCATCAGGTGGAAAGCACGCAGCGCCTGAGCCTCCTCTCCAAAGTGTCTCAGGAAATACGCCTTCCTGTCACACTCTGAGAGCCCCTCGATCTCCACGAAGAGTGGCTGCTCCACCATGAGCCGCAGCTCCCTTAGGGCCTCGGGCCGTGTGGTGACCAGTAGGGCGGCCGTGGGTAAGAGCTTTCTCTTCAGTAAGCTCCCCAGGAGGGTGGACGCAGGCCTCTGTGTCTTCCAGTCCACACACAGGTCGTGCACCAGCGCCTCCACCCCTGAGGGCACGCGCAGCTCCTCGAAAGCATCAATGACAAACAGGAGTTTCTGTGCCTGGGTCAGGACCTGTGCAAGGGCATCCTGCAGGTCTGGGGCACTCTGGGCCAGGAGTTCTATGAAGGAGCACATCCCCTTGCGGCTGAGCGCCTTGCAGCTGAGATAGAAGGCAGTGGGGCAGGTCTGTGCAAGGCTGTCCTCTGTCCAGTCCAGCATGCACTTCTTGGCCAGAG i canFam3.chr1 C 0 C 0 a score=163138.000000 s hg38.chr19_GL949753v2_alt 652423 45 + 796479 TGGTTTTCCCCACGCCTGCGGGGCCGTGCAGCACCACCGTGTAAG s panTro4.chr19 59860377 45 + 63644993 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACCGTGTAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771509 45 + 60714840 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACTGTGTAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3617664 44 + 106955855 TGGTTTT-CCCAAGGCTGCAGGACCGTGCAGCACCACCGTGTAGG i nomLeu3.chr10 n 0 I 31972 s rheMac3.chr19 60597278 45 + 64156825 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737016 45 + 59248254 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842559 45 + 51301725 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552050 45 + 50890351 TGGTTTTCCCCACGCCCGCGGGGCCGTGCAGCACCACGGTGTAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904352 45 + 49145316 TGGTTTTCCCCACACCCGCAGGACCGTGCAGAACCACCGTGTAAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633370 45 + 122678785 TGGTCTTCCCAACGCCCGCAGGACCATGCAGCACCACCGTGTGTG i canFam3.chr1 C 0 C 0 a score=388882.000000 s hg38.chr19_GL949753v2_alt 652468 165 + 796479 GTGTTAGCTTCCTGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGTCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGACTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTGCAG s panTro4.chr19 59860422 165 + 63644993 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCAGAGTGACGGCGTCATGGAAATTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CGAAGATTGTTTCTCCATTGAATTTCTCCATCCTTCCTTTTCACCTACAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771554 165 + 60714840 GTGTTAGCTTCCTGGGTGTTATGGGATTCAAGAATGGAATGAACCGTAGGTTTCTCAGAGTGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTCCATTGAATTTCTCCGTCCTTCCTTTACACCTGCAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60597323 165 + 64156825 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737061 165 + 59248254 GTGTTAGCTTCCTCGGTGTGCTGGGATTCAAGAATGGAATGAACCGTTGGTTTCTCTGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCACTGAATTTCTCTGTCCCTCCTTTTCACCTGCAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842604 165 + 51301725 GTGTTAGCTTCCCGGGTGTTCTGGGATTCAAGAATGGAATGAACCGCTGGTGTCTCAGAATGACGTCGTCATGGAAACTGTCAATGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAATTTCTCCGTCCCTCCTTTTCACCTGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552095 165 + 50890351 GTGTTAGCTTCCCGGGTGTTCTGGCATTCAAGAATGGAATGAACCGTTGGTTTCTCCGAATGACGTCGTCATGGAAACTGTCAGTGTCTCCTTGCCAAAAGGTGTTCTTCCAGAC---CAAAGATTGTTTCTGCATTGAGTTTCTCCGTCCCTCCTTTTCACCTGCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904397 165 + 49145316 GGGCTGGCTGCGTGGGTCTTCTGGGATTCAAGAATGGAATGAACCTTTGGTTTCTCTGAGTGACATGGTCGTGGAAATTGTCACTGTCTCCTCGCCAAAAAGTGTTCCGCGAGAC---CAAAGACTGTTCGTCAGTCACGTTTCTCCATCCTTCCTTCTCACCTGCAG i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633415 165 + 122678785 GAAATGGTCCTGCAAGCATTTTAGGATTACAGAATGGGATCAGTGTCTCATATTTCTGGGTGACAGTG---TGAATGTTTTCACTGGCTCCAGGCCAAAAGTTCTTCTTCCACATTTGCTGGACCTTCTCTTTCAATATACTTATATACTTATCTTGTTTACCTTCAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3617708 31972 + 106955855 I a score=20106.000000 s hg38.chr19_GL949753v2_alt 652633 5 + 796479 TGACA s panTro4.chr19 59860587 5 + 63644993 TGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771719 5 + 60714840 TGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306436 5 - 106955855 TGACA i nomLeu3.chr10 M 207 C 0 s rheMac3.chr19 60597488 5 + 64156825 TGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737226 5 + 59248254 TGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842769 5 + 51301725 TGACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552260 5 + 50890351 TGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904562 5 + 49145316 TGACA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633580 5 + 122678785 TGATA i canFam3.chr1 C 0 I 30 a score=161631.000000 s hg38.chr19_GL949753v2_alt 652638 61 + 796479 GCCCATAGGACAGTTGAGGTTGATGATGATGATTTTCTG--AATTATTTTGTCAAGTACCAGA s panTro4.chr19 59860592 63 + 63644993 GCCCATAGGACAGTTGAGGTTGATGATGATGCTCTTCTGAAAATTACTTAGTCAAGTACCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771724 63 + 60714840 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACTTTGTCAAGTACCAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306441 63 - 106955855 GCCCATAGGACAGTTGAGGCTGATGATGATGCTCTTCTGAAAATTACCTTGTCAAGTACCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597493 63 + 64156825 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737231 63 + 59248254 GCCCACAGGACAGTTCAGGTTGATGATTACACTCTTCTGAAAATAACTTTGCCAAGTACCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842774 63 + 51301725 GCCCATAGGACAGTCGAGGTTGATGATTACGCTCTTCTAAAAATAACTTTGCCAAGTACCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552265 63 + 50890351 GCCCATAGGACAGTTGAGGTTGATGATTACACTCTTCTGAAAATTACTTTGCCAAGTACCAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904567 62 + 49145316 GACCACAGGACAGGTGAGGTTGGGGA-GATATTCATCTGAAAATGACTGTGTAAAGTACCAGA i calJac3.chr22 C 0 I 1893 e canFam3.chr1 102633585 30 + 122678785 I a score=39240.000000 s hg38.chr19_GL949753v2_alt 652699 16 + 796479 AATGAGggccaggcac s panTro4.chr19 59860655 16 + 63644993 AATGAGggccaggcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771787 16 + 60714840 AATGAGggccaggcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306504 16 - 106955855 AATGAGggccaggcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597556 16 + 64156825 AATGAGggccgggtac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737294 16 + 59248254 AATGAGggccgggtac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47842837 16 + 51301725 AATgagggccgggtac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552328 16 + 50890351 AATGAGggccgggtac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I e calJac3.chr22 45904629 1893 + 49145316 I a score=10476.000000 s hg38.chr19_GL949753v2_alt 652715 3 + 796479 ggt s panTro4.chr19 59860671 3 + 63644993 ggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771803 3 + 60714840 ggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306520 3 - 106955855 ggt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597572 3 + 64156825 ggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737310 3 + 59248254 ggt i macFas5.chr19 C 0 I 541 s papAnu2.chr19 47842853 3 + 51301725 ggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552344 3 + 50890351 ggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237880 3 - 49145316 ggt i calJac3.chr22 I 39388 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=785473.000000 s hg38.chr19_GL949753v2_alt 652718 267 + 796479 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccggctactcaggaggctgaggc-agagaattgcttgaacccgggaggcagaggttgcaatgagcagagacggagccactacactccagcctgggctac-agagcaagattccgtc s panTro4.chr19 59860674 267 + 63644993 gtctcatgcttgtaatcccggcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccatctctactaaaaatacaaaacattagctgggggtagtggcggccgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagattccatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56771806 267 + 60714840 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttgagatcaggagttccagaccagcctggccaagatagtgaaatcccatctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaggaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcaaagacggagccactgcactccagcctgggctac-agagcaagattccgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306523 266 - 106955855 ggctcatgcttgtaatcccagcactttgggaggccgaggtgggtggatcacttaaggtcagaagttcaagaccagcctggccaagatagtgaaatcccatctctactaaaaatac-aaacattagctgggggtagcggcgggcgcctgtaatcccagctactcaggaggctgagtc-acagaattgcttgaacccaggaggcggaggttgcaatgagcagagacggagccactgcactccagcctgggctac-agagcaagatcccgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597575 267 + 64156825 ggctcacgcctgtaatcccagcacttcgggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctaccaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55737854 267 + 59248254 ggctcacgcctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcccctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggcggaggttgcaatgagcagagatggaaccactgcacgccagcctgggggac-agagcaagattccgtc i macFas5.chr19 I 541 C 0 s papAnu2.chr19 47842856 267 + 51301725 ggctcacgcctgtaatcccagcacttcaggaggccgaggtgggtggatcacttgaggtcaggagttcaaaaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcgcctgtaatcccagctactcaagaggctgaggc-agagaattgcttgaacccgggaggtgggggttgcaatgagcagagatggaaccactgcactccagcctgggggac-agagcaagattctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552347 267 + 50890351 ggctcacgcctgtaatcccagcacttcgggaggcccaggtgggtggatcacttgaggtcaggagttcaagaccaacctggccaagatagtgaaaccccgtctctactaaaaatacaaaacattagctgggggtagtggcgggcacctgtaatgccagctactcaagaggctgaggc-agagaattgcttgaagccgggaggtagaggttgcaataagcagagatggaaccactgcactccagcctgggagac-agagcaagattctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3237883 267 - 49145316 ggctcacgccgataatcccagcactttgggaggctgaggcgggtggatcac--gaggtcaagagattgagaccatcctggttgacatggtgaaaccccgtctctactaaacatacaaaaaattagctgggcacggtggcgcatgcctgtaatcccagctactcaggaggctgaggcgggagaatcgcctgaacccaggaggcggaggttgcggtgagccgagatcgcgccattgcactccagcctgggtgacaagagcgaaactccgtc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102633585 30 + 122678785 I a score=2101.000000 s hg38.chr19_GL949753v2_alt 652985 3 + 796479 tc----------a s panTro4.chr19 59860941 3 + 63644993 tc----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772073 3 + 60714840 tc----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306789 3 - 106955855 tc----------a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597842 3 + 64156825 tc----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738121 3 + 59248254 tc----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843123 2 + 51301725 tc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552614 13 + 50890351 tcaaaaaaagaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3238150 3 - 49145316 tc----------a i calJac3.chr22 C 0 T 27878 s canFam3.chr1 102633615 3 + 122678785 TC----------A i canFam3.chr1 I 30 C 0 a score=575906.000000 s hg38.chr19_GL949753v2_alt 652988 204 + 796479 ----aaaaaaaaaaaaaC--TACCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCATGCTCTCAAACACCAAACTCAT----GACCATAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG s panTro4.chr19 59860944 201 + 63644993 ----aaaaaaaaaaaa-----gccagaaatgaataaaaCCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCAAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTCAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGATGTAAGCCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772076 200 + 60714840 ----aaaaaaaaaGTA------CCAGAAATGAATAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACATCAAACTCAT----GACCACAGGACTGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTTCCAGCTCAGGATTATCTGTTTCTTGCACCTGTCCATACTCTGTAAAATAC---TTAGATGTAAGCCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306792 195 - 106955855 ----aaaaaaaaaaaG----TACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCT-------TCTCAAACACCCAACTCAT----GACCACAGGACCGTATTTACCCACCTGGCTTTGCTAACTCCGAGTCTTCTTCTGCATCTCCCAGCTGAGGATTATCTATTTCTTGCACCTGTCCGTCCTCTGTAAAATAC---TTAGACGTAAGCCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60597845 206 + 64156825 ----aaaaaaaaaaaaaaaaTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738124 206 + 59248254 ----aaaaaaaaaaaaaaaaaaCCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACAAGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843125 206 + 51301725 ----aaaaaaaaaaaaaaaataccagaaatgaagaaaaccaggaagaaatgatGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCGTATTTACCCACCTGGCTTTGCTAACTCTGAGTCTTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552627 206 + 50890351 ----aaaaaaaaaaaaaaaGTACCAGAAATGAAGAAAACCAGGAAGAAGTGATGCACCTTGCACGCTCTCAAACACCACACTCAT----GACCACACGACCATATTTACCCACCTGGCTTCACTAACTCTGAGTAGTCTTCTGCATCTCCCAGCTGAGGGTTATCTATTTCTTGCACCTGTCCGGCCTCTGTAAAATAC---TTAGATGTAAGCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45906522 196 + 49145316 ------AAGAAAACACGAATCACT--AAATGAAGAAAACCAGGAAGAAGTGATGCGCCTTGCACCTTCCCAAACGCCGAAGTCGC----GACGAGAC-----TGTTCACCCACCTGGCTTTGCTGACTCCAAGTCTTCTTCTAAGTCTCCCAGCTCAGGGTTATCTACTTCTTCCATCTGTCTGTCCTCTGTAAAATAC---ACAGACG-GAGCCTG i calJac3.chr22 I 1893 T 1914 s canFam3.chr1 102633618 203 + 122678785 TTAGGAAAAAAAAATACCTGTGTCAAGTAAGAACATGATAATAGAGAAGTTATCAA------GAACTACCTGACACTAAGCTCATCCAGGAAGATAGGA-------TACAGACCTGGCTTTTCTCCTTTCAAACCTTCCTTTGCTTCTTCTGGATTTGTGACATCTTCTTCCTGTACTTGTGTAAATGCTGCAAAATACAAATTAAA-GTGAGCATG i canFam3.chr1 C 0 C 0 a score=94449.000000 s hg38.chr19_GL949753v2_alt 653192 31 + 796479 ACACAGTAATTTACACTTCGTAAATCAGACA s panTro4.chr19 59861145 31 + 63644993 ACACAGTAATTTACACTTCGTAAATCAGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772276 31 + 60714840 ACACAGTAATTTACACTTCGTAAATCAGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103306987 31 - 106955855 ACACAGTAATTTACACTTCGTAAATCAGACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598051 31 + 64156825 ACACAGCAATTTGCACTGCGTAAATCAGACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738330 31 + 59248254 ACACAGTAATTTGCACTGCGTAAATCAGACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843331 31 + 51301725 ACACAGCAATTTGCACTGCGTAAATCAgaca i papAnu2.chr19 C 0 I 540 s chlSab2.chr6 47552833 31 + 50890351 ACACAGCAATTTGCACTGCGTAAATCAGACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904804 31 + 49145316 TCATGGTCATTTGTACTTCCTGAATCAGGCA i calJac3.chr22 T 1914 C 0 s canFam3.chr1 102633821 31 + 122678785 ACACAAAAATGTGAATTTCTTTTATCAGAGA i canFam3.chr1 C 0 C 0 a score=4095.000000 s hg38.chr19_GL949753v2_alt 653223 1 + 796479 T s panTro4.chr19 59861176 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772307 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307018 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598082 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738361 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843902 1 + 51301725 T i papAnu2.chr19 I 540 C 0 s chlSab2.chr6 47552864 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904835 1 + 49145316 T i calJac3.chr22 C 0 C 0 s canFam3.chr1 102633852 1 + 122678785 T i canFam3.chr1 C 0 I 3195 a score=49715.000000 s hg38.chr19_GL949753v2_alt 653224 19 + 796479 TATTGTACATAAAGTGTCA s panTro4.chr19 59861177 19 + 63644993 TATTGTACATAAAGTGTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772308 19 + 60714840 TATTGTACATAAAGTGTCa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307019 19 - 106955855 TATTGTACATAAAGCGTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598083 19 + 64156825 TATTATGCATAAAGTGTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55738362 19 + 59248254 TATTATACATAAAGTGTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843903 19 + 51301725 TATTATACATAAAGTGTca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552865 19 + 50890351 TATTATACATAAAGTGTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45904836 19 + 49145316 TGTAGAAAAGAAAGCATCA i calJac3.chr22 C 0 I 4633 e canFam3.chr1 102633853 3195 + 122678785 I a score=565980.000000 s hg38.chr19_GL949753v2_alt 653243 261 + 796479 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-----aaaaaaaaa-aaaattagccaggtgtggtgaaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcggaggttgcagtgagcccagatctcgccactgcactccagcct s panTro4.chr19 59861196 260 + 63644993 gccaggcatggtggctcatgcctgtaatcacagcactttggaaggctgaggtgggcagatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac------aaaaaaaa-aaaattagccaggtgtggtggaacacgcctgtaatcccagctactccggaggctgagataggagaatcacttgaacccagaggcgtaggttgcagtgagcccagatctcaccactgcactccagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772327 247 + 60714840 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggcggatcacaaggtcaggacatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaagtgtggtggcacacgcctgtaatcccagctactccagaggctgagataggagaatcactt-aacccagaggcagaggttgcagtgagcacagatctcaccactg----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307038 247 - 106955855 gccaggcatggtggctcacgcctgtaatcacagcactttggaaggctgaggtgggtggatcacaaggtcaggagatcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatac-------aaaaaaa-aaaattagccaggtgtggtggcacacacctgtaat-ccagctactcgggaggctgagataggaaagtcgcttgaacccagaggcggaggttgcagtgagcccagatctcaccactg----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60598102 266 + 64156825 gctgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagatcagcctggccaatgtggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i rheMac3.chr19 C 0 I 1440 s macFas5.chr19 55738381 252 + 59248254 gccgggcgtggcggctcacgcctgtaatcccagcactttgagaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc---aaaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagataggagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47843922 256 + 51301725 gccgggcgcggcggctcacgcctgtaatcccaacactttggaaggctgaggtgggcagatcacaaggtcaggaactcaagaccagcctggccaacatggcaaaaccccatctctactaaaaataccaaaaaaaaaaaaataaaaaaagccaggtatgatggcacaggcctgtaatcccagctactcgggaggccgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactg----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47552884 262 + 50890351 gccaggcgcggcggctcatgcctgtaatcccagcactttgggaggctgaggtgggcaaatcacaaggtcaggagctcaagaccagcctggccaatgtggcaaaaccccatctctactaaaaatacc----aaaaaaaaa-aaaattagccaggtatgatggcacaggcctgtaatcccagctactcgggaggctgagatagaagaatcacttgaacctggaggcggaggttgcagtgagccaagatctcaccactgcactccagcct i chlSab2.chr6 C 0 I 1475 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=50840.000000 s hg38.chr19_GL949753v2_alt 653504 46 + 796479 tacactccagcctgggcgacagaacgagactccatctcaaaaaaaa s panTro4.chr19 59861456 40 + 63644993 tacactccagcctgggcgacagagcgagactccatctc------aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56772574 44 + 60714840 --cactccagcctgggcgacagagcgagactccatctcaaaaaaaa i ponAbe2.chr19 C 0 I 2071 s nomLeu3.chr10 103307285 44 - 106955855 --cactccagcctgggcgacagagcgagactccatctcaaaagaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738633 44 + 59248254 --cactccagcctgagtgacagagcgagactctgtctcaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844178 44 + 51301725 --cactccagcctgggcaacagagtgagaccctgtctcaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1365.000000 s hg38.chr19_GL949753v2_alt 653550 1 + 796479 a s panTro4.chr19 59861496 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774689 1 + 60714840 a i ponAbe2.chr19 I 2071 C 0 s nomLeu3.chr10 103307329 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738677 1 + 59248254 a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47844222 1 + 51301725 a i papAnu2.chr19 C 0 I 1452 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1820.000000 s hg38.chr19_GL949753v2_alt 653551 2 + 796479 aa s panTro4.chr19 59861497 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774690 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307330 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55738678 2 + 59248254 aa i macFas5.chr19 C 0 I 1404 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=2115.000000 s hg38.chr19_GL949753v2_alt 653553 5 + 796479 aaaaa s panTro4.chr19 59861499 5 + 63644993 aaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774692 5 + 60714840 acaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103307332 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 1724 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=1228.000000 s hg38.chr19_GL949753v2_alt 653558 6 + 796479 aaaaaa s panTro4.chr19 59861504 6 + 63644993 aaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774697 6 + 60714840 acaaaa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I e nomLeu3.chr10 103307337 1724 - 106955855 I e chlSab2.chr6 47553146 1475 + 50890351 I e papAnu2.chr19 47844223 1452 + 51301725 I e macFas5.chr19 55738680 1404 + 59248254 I e rheMac3.chr19 60598368 1440 + 64156825 I a score=15540.000000 s hg38.chr19_GL949753v2_alt 653564 6 + 796479 aaaTGA s panTro4.chr19 59861510 6 + 63644993 aaaTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774703 6 + 60714840 aaaTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309061 6 - 106955855 AAATGA i nomLeu3.chr10 I 1724 C 0 s rheMac3.chr19 60599808 6 + 64156825 AAATGA i rheMac3.chr19 I 1440 C 0 s macFas5.chr19 55740084 6 + 59248254 AAATGA i macFas5.chr19 I 1404 C 0 s papAnu2.chr19 47845675 6 + 51301725 AAATGA i papAnu2.chr19 I 1452 C 0 s chlSab2.chr6 47554621 6 + 50890351 AAATGA i chlSab2.chr6 I 1475 C 0 e canFam3.chr1 102633853 3195 + 122678785 I e calJac3.chr22 45904855 4633 + 49145316 I a score=19904.000000 s hg38.chr19_GL949753v2_alt 653570 6 + 796479 CCAGGA s panTro4.chr19 59861516 6 + 63644993 CCAGGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774709 6 + 60714840 CCAGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309067 6 - 106955855 CCAGGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599814 6 + 64156825 CCAGGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740090 6 + 59248254 CCAGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845681 6 + 51301725 CCAGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47554627 6 + 50890351 CCAGGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 102637048 6 + 122678785 CTAGGA i canFam3.chr1 I 3195 C 0 e calJac3.chr22 45904855 4633 + 49145316 I a score=1077798.000000 s hg38.chr19_GL949753v2_alt 653576 346 + 796479 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA s panTro4.chr19 59861522 346 + 63644993 CACC-------CCAGGTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAAAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCGAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GAGGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56774715 346 + 60714840 CACC-------CCAGCTTCTACTTACCCATCATCTCAGCCTTTGCCATCTTACACAATTCCATGAGATTCATCTCTTCCAAGATGTTCACAGTCGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCGGCCTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCGAGGGGAAGAGCCCATAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGAGTCCACTCTAGCTGGGGCGATG---TCATAGTGCTCCAAGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGGGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309073 347 - 106955855 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCCGTGAGATTCATCTCTTCCAAGATGTTCACAGTTGCATTCCTTATCCAATTTTCTGAGGAGGTGTTGACCAGAATTTCTGCCAGTTTCTTGCCATCAGCTTCTTCCACCTCAGACCATGGGGTCTTCTGTAGCACGTCTTCCAGGGGGAGAGCCCATAAAAGGGATTTGAAACTCTTTAATTCATCCTCATTCAGCTGCTCCAGAAGGGTCTCCAGAGTCCACTGTAGCTGGGTTGCCA---TCATAGTGCTCCAAGTATGAGACCTCAGGTTAAGGC--TGAAGA--ACTGCGGGGGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60599820 345 + 64156825 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCTGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACATCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TAAAGA--ACTG-GGAGAAA- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55740096 345 + 59248254 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCATGGGGCCTTCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47845687 345 + 51301725 CACC-------GCAGGTTCTACTTACCCAGCATCTCAGCCTTTGCCATCTTACACAATTCTGTGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGACGTGTGGATTAGAATTTCTGCCAGCTTCTTGCCGTCAGCCTCTTCCACCTCAGACCACCGGGTCTGCTGCAGCACGTCTTCCAGGGGAAGAGCCCTTAAGAGGGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--actg-ggagaaa- i papAnu2.chr19 C 0 I 314 s chlSab2.chr6 47554633 345 + 50890351 CACC-------CCAGGTTCTACTTACCCAGCATCTCAGACTTTGCCATCTTACACAATTCCATGAGGTTCATCTCTTCCAAGACAGTCACAGTTGCACTCCTTATCCAATTTTCTGAGGATGTGTTGATTAGAATTTCTGCCAGCTTCTTGCCATCAGCCTCTTCCACCTCAGACCACGGGGTCTTCTGCAGCACGTCTTCGAGGGGAAGAGCCCTTAAGAGCGATTTGAAACTCTTTAATTCATCCTCGTTCAGCTGCTCCAGAAGGGTCTGCAGCGTCCACTCGAGCTGTGGCGATG---TCATAGTGCTCCACGTATGAGACCTTAGGTTAAGGC--TGAAGA--ACTG-GGAGAAA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909488 346 + 49145316 CATT-------CCGTGTTCTGCTCACCCAGCAACTCCACCTTTGCCATCTCAGACAATTCGGGGAGATTCAGCTCTTCGAAGACCTTCACAGTCGCGTTCCTTATCCAGCATTCTGAGGATGTGTTGACCAGAATTTCTGCCAGTTTCCTGCCGTTGGCTTCTTCCACCTCCGACCACGGGGTCTTCTGTAGCACATCTTCTAGGGGAAAAGCCCTCAAGATGGACTTGAAAGTCCCCAATTCACCCTCGCTCAGCTGCTCCAGAAGGGTCTGCAGAGTGTACTGCAGCTGTGGTAATG---TCATGGTGCTCCACGTGTGACAGCTTAGGTCAAGGC--CAAAGA--TCTA-GGGGAAAA i calJac3.chr22 I 4633 C 0 s canFam3.chr1 102637054 359 + 122678785 CACCATGTGGGCTTGTTTCTACTTACCCCTGAGCTCATCCTTTGCTCTCTCAGACAGATCGGTTCGGTTCATCTTGTCAAAAATCTGGATGGTCACCATCTCTACCCAGTGGCTGGGGCAGTGGTTGATAAGAATTTCTGCCAGCTGCTTCCCATCGGCCTCCTCTACCTCTGTCGCAGGGATGTGCTGTAATTCATCTTGTAGGGAAAGGGGCCTCAACAGAGACTTGAACTGGCTCAGCTCATCCTGGGCAAACTGTTCTAGAAGGGGCTGCAGGTTGAAACCCAGCTGTGCAGAAGGTTCCATCTTGTTCTACATGAGAGATCTGAGCTTTGGGCATTAAAGAAGAATA-AGGGAAG- i canFam3.chr1 C 0 C 0 a score=42929.000000 s hg38.chr19_GL949753v2_alt 653922 17 + 796479 AAAGGAAAAACAGTTCA s panTro4.chr19 59861868 17 + 63644993 AAAGAAAAAACAGTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775061 17 + 60714840 AAAGAAAAAACAGTTCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309420 17 - 106955855 AAAGAAAACACAGTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600165 17 + 64156825 AAAGAAACAACAGTTCA i rheMac3.chr19 C 0 I 480 s macFas5.chr19 55740441 17 + 59248254 AAAGAAACAACAGTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846346 17 + 51301725 aaagaaaaaacaattca i papAnu2.chr19 I 314 C 0 s chlSab2.chr6 47554978 17 + 50890351 AAAGAAACAACAGTTCA i chlSab2.chr6 C 0 I 318 s calJac3.chr22 45909834 13 + 49145316 ----AAGGAACAGTTCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637413 13 + 122678785 AAATGAAAGAGAG---- i canFam3.chr1 C 0 C 0 a score=1219.000000 s hg38.chr19_GL949753v2_alt 653939 1 + 796479 C s panTro4.chr19 59861885 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775078 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309437 1 - 106955855 C i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740458 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47846363 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45909847 1 + 49145316 C i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637426 1 + 122678785 C i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47554995 318 + 50890351 I e rheMac3.chr19 60600182 480 + 64156825 I a score=4435.000000 s hg38.chr19_GL949753v2_alt 653940 2 + 796479 GA s panTro4.chr19 59861886 2 + 63644993 GA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775079 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309438 2 - 106955855 CA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600662 2 + 64156825 GA i rheMac3.chr19 I 480 C 0 s macFas5.chr19 55740459 2 + 59248254 gg i macFas5.chr19 C 0 I 598 s papAnu2.chr19 47846364 2 + 51301725 gA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555313 2 + 50890351 GA i chlSab2.chr6 I 318 C 0 s calJac3.chr22 45909848 2 + 49145316 AA i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637427 2 + 122678785 GA i canFam3.chr1 C 0 C 0 a score=174733.000000 s hg38.chr19_GL949753v2_alt 653942 65 + 796479 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA s panTro4.chr19 59861888 65 + 63644993 GTTACCATCATTAAATGAAACCACAGTTTCCTGTGTGCCAAGAACAAGA-----CTGTTCCTGCTGTACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775081 63 + 60714840 GTTACCATCATTAAATGAAAC--CAGTTTCCTATGTACCAAGAACAAGA-----CTGTTCCTGCTGCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309440 65 - 106955855 GTTACCATCATTAAATGAAACCACAGTTGCCTATGTGCCAAGAACAAGA-----CTGTCCCTGCAGCACC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600664 65 + 64156825 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741059 65 + 59248254 GTTACCATCATTAAATGAAACAACAGCTGCCTATGTGCTGAGAATGAGA-----CTGTTCCCGCTGCACC i macFas5.chr19 I 598 C 0 s papAnu2.chr19 47846366 70 + 51301725 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGGCGAGAATGAGACTGTTCTGTTCCCGCTGCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555315 65 + 50890351 GTTACCATCATTAAATGAAACAACAGCTGCCTGTGTGCCGAGAATGAGA-----CTGTTACCGCTGCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909850 61 + 49145316 GTTACCATCATTCAATGAAA--ACAGTGGCCTGTGTGCCGAGAACAA-------CTGTCCGTGCCGTACC i calJac3.chr22 C 0 C 0 s canFam3.chr1 102637429 65 + 122678785 ATCAGTATTCCTACTTCAAATGACAGTTGCCTCTGTGCCAAGAACTGGG-----CAATTATCACTGCCCA i canFam3.chr1 C 0 n 0 a score=93711.000000 s hg38.chr19_GL949753v2_alt 654007 39 + 796479 GTGAGTGGTAAAATATTCCAAAGACTGAATTAAGAGACT s panTro4.chr19 59861953 39 + 63644993 GCGAGTGGTAAAATATTCCATAGACTGAATTAAGAGACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775144 39 + 60714840 ATAAGTGGTAAAATATTACATAGACTGAATTAAGAGACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309505 39 - 106955855 ATGAGTGGTAAAATATTATGTAGACTGAATTAAGAGACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600729 39 + 64156825 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55741124 39 + 59248254 AGGAGTGCTAAAATATTACGTAGACTGAATTAAGAGACG i macFas5.chr19 C 0 T 568 s papAnu2.chr19 47846436 39 + 51301725 AGGAGTGCTAAAATATCACGTAGACTGAATTAAGAGACG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47555380 39 + 50890351 AGAAGTGCTAAAATATTACATAGACTGAATTAAGAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45909911 38 + 49145316 CTGAGTGGTGAAACGTGAGGTAGACCGAATTAAGAGAT- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=96484.000000 s hg38.chr19_GL949753v2_alt 654046 34 + 796479 GAAAATCTGGCCCAGCACggtggctcacgcctgc s panTro4.chr19 59861992 34 + 63644993 GAAAATCTggcccagcacggtggctcatgcctgc i panTro4.chr19 C 0 I 42 s ponAbe2.chr19 56775183 34 + 60714840 GAAAATCTGgcccagcacggtggctcatgcctgc i ponAbe2.chr19 C 0 I 42 s nomLeu3.chr10 103309544 34 - 106955855 GAAAATCTGACCCAgcacagtggctcatgcctgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60600768 34 + 64156825 GAAAATCTggcccagcacagtggctcatgcctgc i rheMac3.chr19 C 0 I 1826 s macFas5.chr19 55740595 34 + 59248254 aaaaaattagccgggcgcggtggctcacgcctgt i macFas5.chr19 T 568 I 40 s papAnu2.chr19 47846475 34 + 51301725 GAAAAtctggcccagcacagtggctcatgcctgc i papAnu2.chr19 C 0 I 42 s chlSab2.chr6 47555419 34 + 50890351 GAAAATCTggcccagcacagtggctcatgcctgc i chlSab2.chr6 C 0 I 1731 s calJac3.chr22 45909949 34 + 49145316 GGAAATCTggctgggcgcggtggctcacgcctgt i calJac3.chr22 C 0 I 42 e canFam3.chr1 102637494 0 + 122678785 I a score=36953.000000 s hg38.chr19_GL949753v2_alt 654080 52 + 796479 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA s panTro4.chr19 59862068 52 + 63644993 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i panTro4.chr19 I 42 C 0 s ponAbe2.chr19 56775259 52 + 60714840 ggccaggagttcgagacc-------agcctggctaacttggtaaaa-----------AGAACGAACAAAA i ponAbe2.chr19 I 42 C 0 s macFas5.chr19 55740669 54 + 59248254 ggtcaggagatcgagaccatggtgaaaccccgtttctactaaaaat-----------agaaaaaa----- i macFas5.chr19 I 40 I 2 s papAnu2.chr19 47846551 52 + 51301725 ggccaggagttcaagacc-------agcctggctaacgtggtaaaA-----------AGAacgaaccaaa i papAnu2.chr19 I 42 I 597 s calJac3.chr22 45910025 62 + 49145316 ggtcgggagtttgagacc-------agcctggccaacatggcaaaaccgtccctactaaaactacaaaa- i calJac3.chr22 I 42 I 2 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103309578 0 - 106955855 C e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=27420.000000 s hg38.chr19_GL949753v2_alt 654132 39 + 796479 ggctgggcacggtggctcacgcctgtaatcccagcactt s panTro4.chr19 59862120 39 + 63644993 ggccgggcacggtggctcacgcctgtaatcccagcactt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56775311 39 + 60714840 ggccgggcacggtggctcatgcctgtaatcccagcactt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309578 13 - 106955855 --------------------------aatctcagcactt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740725 39 + 59248254 agctgggcgcagtggcgggcgcctgtagtcccagctact i macFas5.chr19 I 2 C 0 s calJac3.chr22 45910089 39 + 49145316 agccggacatggtggcccatgcctgtaatcccagctact i calJac3.chr22 I 2 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I a score=132689.000000 s hg38.chr19_GL949753v2_alt 654171 262 + 796479 tgggaggccgaggcggatggat--cacgatatcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacccctgcctctact-aaaaaaatacaaaaaattagcagggcgtggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgtgaacccgggaagtggagcttgcagtgagcagagatctcaccattgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaa s ponAbe2.chr19 56775350 262 + 60714840 tgggaggccgaggcgggtggat--cacgatgtcaggagatcgaga-------------------------------ccatcctggctaac-acagtgaaacacctgtctctact-aaaaaaatacaaaaaattagccgggcatggtggcgggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcgggaggctgaggcaggagaatggtgggaacccgggaggcggagcttgcagtgagctgagatagcgacactgcactccagcctgggtgacagagcgaaactcggtctcaaaaaaaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309591 263 - 106955855 tgggaggctgaggcaggcggat--cacaaggtcaggagatggaga-------------------------------ccgtcctggctaac-acagtgaaacccccgcctctactaaaaaaaatacaaaaaattagccaggcgtagtggcaggcacctgtagtccc-------------------------------------------------------------------------------------------agctactcaggtggctgaggcaggagaatggtgtgaacacgggaggcggagcttgcagtgagcagagatcgcgccattgcactccagcctgggcaacagagccagactccatctcaaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55740764 274 + 59248254 cgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggtgac-agagcaagactcc-gtctca----aaaaaaaaaaaaaaaattagccgggcgtggtggcgggcgcctgtagtccc-------------------------------------------------------------------------------------------agctactcaggagactgaggcaggagaatggcgtgaaacc-----------------ctgagccgagattgcaccactgcactccagcctgggcgacagagccagactccgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s calJac3.chr22 45910128 366 + 49145316 tgggaggctgagacaggagaatcgctccaacccaggaggtggaggttgcagtgagccactatact-----------ccagcctgggcaacaagagcgtaactcc-atctc-----aaaaa-----aaaaaaaTGTCAgggcacggtggcccacacctgtaatcccatcactttagtagactgaggtgggtggatcactggagtctggggagttagagaccagcctgagcaacaaggcaaaaccctgtctctactctagctacttggggggctgaggcaggaggatttcttgtgcccagaaagttgaggctgcagtgaggcaagatcacagcactgcattccagcctgagtgacaaggtgagactctgcctcaaaaaaaaaaaaaaaaa i calJac3.chr22 C 0 I 372 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1998.000000 s hg38.chr19_GL949753v2_alt 654433 5 + 796479 aaaaa s ponAbe2.chr19 56775612 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103309854 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 I 18 s macFas5.chr19 55741038 5 + 59248254 gaaag i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=1403.000000 s hg38.chr19_GL949753v2_alt 654438 6 + 796479 aaaaga s nomLeu3.chr10 103309877 6 - 106955855 AAAAGA i nomLeu3.chr10 I 18 C 0 s macFas5.chr19 55741043 6 + 59248254 aaaaaa i macFas5.chr19 C 0 I 1144 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=13630.000000 s hg38.chr19_GL949753v2_alt 654444 168 + 796479 aTACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctgcctaatgggggcttcctatatgtacctataccaacgtccatgggctgtgatttcacactgatagtacaaaatcacaaggggagtgtttatgccacagaaatcagcaaacacggcagggcgc s nomLeu3.chr10 103309883 159 - 106955855 ATACAAAGAATGAAGGGTcagtggtatgctagggccagcccgtgctggctaatgggggcttcctacatgtacctataccaacatccatgggctgtgatttcacactgatagtacaaaatcacaa---------tcataccacagaaatcagcaaacacggcagggcgt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47846603 597 + 51301725 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=59802.000000 s hg38.chr19_GL949753v2_alt 654612 413 + 796479 ggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggataacctgaggtcgggagctcaagaccagcctgaccaacacggcgaaac-cccatctctactaaaaatacagaaatta--caggcg--------ggtgcctgtaatcccagctactcaggaggccgagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatctgagatcacgccattgcactcgagcctcggcaacaagaacaagactctgtctcaaacaaacaaaaaaacaaatcagcaaacactacaaaccaagacttcctcgccaccaaccctcagagccacttgtttaacatttcagcccaccactgAATGACACATTGAAAACAAATAGCAAGAGGACAGATATAAATATAACTGTACT s nomLeu3.chr10 103310042 423 - 106955855 ggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtccggagctcgagaccagcctgaccaacacagcgaaac-cctgtctctactaaaaatacaaaaattaaccaggcgtggtggcaggtgcctataatcccagctactcaggaggccaagacaggagaatcacacttgaacctgggaggtggaggttgca-tgatccgagatcacgccattgcactcgagcctgggcaacaagaacaaaactctgtctcaaacacacaaaaaaagaaatcagcaaacactacaaaccaagacttcctcgccaccaaccccaagagccacttgtttaacatttcagcccaccactgAATGACACATCGAAAACAAATAGCAGGAGGACAGATATAAATATAACTGTACT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47847200 307 + 51301725 ggtggctcaggcctggaatcccagcac-ttgggaggccaaggcaggtggatcacctgatgtcagccatttgagaccagcctggcccacgtggaGAAacgcccgtctctactaaaaatatagaagccagccaggcgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaagagaat--cgcttgaacccaggaggcagaggttgcagtgagccgagatggcaccattggactccagcctgggcaacaagagcgaaactccgttt-----aaataaatgaattaatta----------------------------------------------------------------------attaaat----------aaataaataa------------------------------ i papAnu2.chr19 I 597 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55741049 1144 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=225527.000000 s hg38.chr19_GL949753v2_alt 655025 475 + 796479 ggccgggtatggtggctcaggcctggaatcccagcactttgggaggctgaggcaggtggatcgcctgatgtcaggagtttgagacccgcctggcccacatggtgaaaccccatctctactaaaaatacaaaagctagccaagtgtagtggtaggaacctgtaatcccaggtacgtgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagcgccattgtactccagcctgggcaacaagagcgaaactctatctcaaaaaaaaa----------------aaaCttagccaggcctggtggaa---catacccgtagtcccagatacttgggaggctgacacaggaggattgtttgagcctacgatttggaggttgcagtgagccagccactgcacgcc-agcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggccgggtgcggtggctcac s nomLeu3.chr10 103310465 491 - 106955855 ggccgggcacggtggctcaggcctggaatctcagcactttgggaggccaaggcaggcagatcacctgacgtcaggagtttgagaccagcctggcccacatggtgaaaccccatctctactaaaaatacagaagctagccagacgtattggcaggaacctgtaatcccagggacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatggtgccattgtactacagcctgggcaacaagagcaaaactccttctcaaaaaaaaataataataataataataaTCttagccaggcctggtggag---catacctgtagtcccagatacttgggaggctgacacaggaggatcgtttgagcttgcgatttggagattgcagtgagccagccactgcactcc-agcctgggtgacagagtgaggcactgtctcaaaaGTAAGTAACTAATggctgggcgcagtggctcac i nomLeu3.chr10 C 0 I 759 s macFas5.chr19 55742193 486 + 59248254 ggccaggtgcagtggctcacgcctgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtatagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaa-----aaaaaaaaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccaggagaatcgtctgagcctgcgatttggaggttgcagaa----agccactgcactccttgcctgggtgacagagtgaggccctgtctcaaaaGTAAGTAACTAATggctgggcgcggtggctcac i macFas5.chr19 I 1144 C 0 s papAnu2.chr19 47847507 486 + 51301725 ggccaggtgcagtggctcacgcccgtaatcccagcacgttgggaggcggaggcagcaggatcacctgatgtcagacgtttgagaccagcctggcccacgtggagaaaccccgtctctactaaaaatatagaagccagccaggtgtagtggcaggaacctgtaatcccaggtacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagatggcgtcattgtactccagcctgggcaacaagagcgaaactctgtctcaaaaacaaa-----acaaaacaaaaaatcgtagccaggcctggtggtggtacatgcctgtagtcccagatacttgggaggctgacccAGGAGAATCGTCTGAGCCTGCGAtttggaggttgcagag----agccactgcactccttgcctgggtgacacagtgaggccctgtctcaaaactaagTAActaatggctgggcgcggtggctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=65923.000000 s hg38.chr19_GL949753v2_alt 655500 260 + 796479 gcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtc---aggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaacaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgg-gaggctgaggcaggagaatggcgggaacccgg--gaggcggagcttgcagtgagcggagatcgcgccaccgcactccagcctgggcgacagagcgagactccgtct s nomLeu3.chr10 103311715 219 - 106955855 gcctgtaatcccagcactttaggaggccaaggcaggcggatcacgaggtc---------------------------------------------tctactaaaaatacaaaaaattaaccaggcatggtggcaggcgcctgtagtcccagctactcagagaggctgaggcaggagaatggcgggaacccgg--gaggcggagcctgcagtgagccgagatggagtcactgcactccagcctgggcgacagagcgagactccgtct i nomLeu3.chr10 I 759 I 20 s macFas5.chr19 55742679 219 + 59248254 acctgtaatcccaacactttgggaggctgaggcagcaggatcccttgaatctggggagttggagaccagcctgagaagcaaggccaaaacctatctctact----------------------------------------------ctagctacttgg-ggagctgaggcaggaggatttcttgagcccggaaaaagctgaggctgcagtgagtcaagatcgtactactgcattctagcctgggtgacaaagtgagactctgcct i macFas5.chr19 C 0 I 26 s papAnu2.chr19 47847993 219 + 51301725 acctgtaatcccaacacttcgggaggctgaggcagcaggatcccttgaatctggggagttggagatcagcctgagcagCAAGGCCAAAACCTATCTCTACT----------------------------------------------ctagctacttgg-ggagctgaggcaggagaatttcttgagcccagaaaaagctgaggctgcagtgagtcaagatcgcactactgcattctagcctgggtgacaaagtgagattctgcct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e chlSab2.chr6 47555453 1731 + 50890351 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=-125.000000 s hg38.chr19_GL949753v2_alt 655760 1 + 796479 G s papAnu2.chr19 47848212 1 + 51301725 c i papAnu2.chr19 C 0 I 26 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 655761 18 + 796479 GGTTGGGGGGGCGGGGGG e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56775617 0 + 60714840 C e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=182.000000 s hg38.chr19_GL949753v2_alt 655779 2 + 796479 AA s ponAbe2.chr19 56775617 2 + 60714840 aa i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910494 372 + 49145316 I e nomLeu3.chr10 103311934 20 - 106955855 I e chlSab2.chr6 47555453 1731 + 50890351 I e papAnu2.chr19 47848213 26 + 51301725 I e macFas5.chr19 55742898 26 + 59248254 I e rheMac3.chr19 60600802 1826 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=8211.000000 s hg38.chr19_GL949753v2_alt 655781 4 + 796479 GAGG s ponAbe2.chr19 56775619 4 + 60714840 GAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311954 4 - 106955855 GAGG i nomLeu3.chr10 I 20 C 0 s rheMac3.chr19 60602628 4 + 64156825 GAGG i rheMac3.chr19 I 1826 C 0 s papAnu2.chr19 47848239 4 + 51301725 gagg i papAnu2.chr19 I 26 C 0 s chlSab2.chr6 47557184 4 + 50890351 GAGG i chlSab2.chr6 I 1731 C 0 s calJac3.chr22 45910866 4 + 49145316 GAGG i calJac3.chr22 I 372 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55742898 26 + 59248254 I e panTro4.chr19 59862159 0 + 63644993 C a score=205284.000000 s hg38.chr19_GL949753v2_alt 655785 107 + 796479 CAGCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGCTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT s ponAbe2.chr19 56775623 107 + 60714840 CACCCTGGAAAATAAATAACAGAAAAAGTGACTTGCCAAGCCCGGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATC-TTTTTCCCCAGCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103311958 104 - 106955855 CAGCCTGGAGAATAAATAACAT----TGTGACTTGCCAAGCCTGGGTGGTGACAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAATCTTTTTTCCCCAGCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60602632 104 + 64156825 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGCAGGGAACAGCAACT--TTTTTCCCCAGCTGT i rheMac3.chr19 C 0 I 1680 s macFas5.chr19 55742924 104 + 59248254 CAGCCTGGAAAATAAATAACAG--AAAATGACTTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAACT--TTTTTCCCCAGCTGT i macFas5.chr19 I 26 C 0 s papAnu2.chr19 47848243 103 + 51301725 cagcctggaaaataaataacag--aaaatgattTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAGC---TTTTTCCCCAGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557188 99 + 50890351 CAGCCTGGA----AAATAACAG--AAAATGACCTGCCAAGCCCAGGTGGTGATAGAGGTGGACAGCTTTACCCTTGGAGGGAACAGCAAC---TTTTTCCCCAGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45910870 101 + 49145316 CAGGCTGGAAAACGAA-AACGG--AAAGTGACTGGCCAAGCCCAGGTGGTGGCAGAAGTGGACAGCTTTACCCT---GAGGAAGGGCAGCTC-TTTCTCCTCAGCTTT i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e panTro4.chr19 59862159 0 + 63644993 C a score=4011.000000 s hg38.chr19_GL949753v2_alt 655892 2 + 796479 GA s ponAbe2.chr19 56775730 2 + 60714840 GA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312062 2 - 106955855 GA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743028 2 + 59248254 GA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47848346 2 + 51301725 GA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47557287 2 + 50890351 GA i chlSab2.chr6 C 0 I 1464 s calJac3.chr22 45910971 2 + 49145316 GA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=4899.000000 s hg38.chr19_GL949753v2_alt 655894 5 + 796479 CGtgt s ponAbe2.chr19 56775732 5 + 60714840 GGtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312064 5 - 106955855 GGtgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55743030 5 + 59248254 GGTAT i macFas5.chr19 C 0 I 1534 s papAnu2.chr19 47848348 5 + 51301725 GGTAT i papAnu2.chr19 C 0 I 1593 s calJac3.chr22 45910973 5 + 49145316 GGTAT i calJac3.chr22 C 0 I 1761 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=151294.000000 s hg38.chr19_GL949753v2_alt 655899 679 + 796479 ggggaaaaggaggacagatcagactgttactgtgtctatgtagaaagaaatagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctagccccaaccctgtgctcccagaaacatgtgctgtgtcacac-gtgggtttagggctatgcaggatgtgctttgttaaacagatgcttgaaggcagcatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaatacactgcggaaggctgcagggacctctgcctagaaaagccaggtattgtccaaagtttctccccatgtgatagcctgagataaggcctcgtgggaagggaaagaccagaccgtaccccagcccgacacccgtaaagggtctgtgctgaagaggattagtataagaggaaggcctttttgcagt-----taagaggaaggtatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgttccatccaccgagataggggaaaaccgccttagggctggaggtgacacatgctggcagcaatactgctctttaatgcaccagatatgtttatgtatgagcacatc-aaggcacagcacatttcctaaccttgtttatgacac--agacatt s ponAbe2.chr19 56775737 678 + 60714840 ggagaaaagaagtagaaatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgctcccagaaacatgtgctgtgtcatttaatgggtttacggctatgcaggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcacca--ctctaatctcaagcacccagggacacaaaacactgcggaaggccgcagggacttctgcctaggaaagccaggtactgtccaaggtttctccccgtgtgatagcctaagatatggcctcctgggaagggaaagacctgaccttcccctagcccgacacccgtaaagggtctgtgcttaagaggattagtaaaagaggaagccctctttgcagt-----taagaggaaggcatctgtctcctgctcgtccctgggcaatggaatgtctcggtgtaaaacccgatggtatgtttcttctactgagatagaagaaaaccgccttagcactggaggtgggacatgctggcggcaatactgctctttaatgcaccag--atgtttatgtatgtgaacatcaaaagtaca-cacattttctaaccttgtttatgacacagagacatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312069 657 - 106955855 ggggcaaaggag---agatcagactgttactgtgtctatgtagaaagaagtagacataagagactccattttgttctgtactaagaaaaattcttctgccttgagatgctgttaacctgtaaccctacccccaaccctgtgcacgcagaaacatgtgctgtgtcgtttaatggatttagggctatgcgggatgtgctttgttaaacaaatgcttgaaggcagtatgcttgttaaaagtcatcaccactctctaatctcaagcacccagggacacaaaacac-gcagaaggccgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgatagtctgaaacatggcctcgtgggaagggaaagacctgaccgtcccctag-------------------ctgtg-----gaggattagtgaaagaggaagacttctttgcagttgagataagaggaaggcatctgtctcctgctcatctgtgggcaatagaatgtctc-gtgtaaaactcgattgtatgttccatctactgagatagaagaaaaccgccttagggctggaggtcagacatgctggtggcaatactgctctttaatacaccagctatgtttatgtatgtgcacatcaaagcgacaccatattttctaagcttgtttatgacag--agacatt i nomLeu3.chr10 C 0 I 246 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=40282.000000 s hg38.chr19_GL949753v2_alt 656578 520 + 796479 tgctcacatgttttcctgctgaccctctccccactgttaccctattgtcctgccacatccccgtctccgagatggtagagataatgaccaataaatactgaaggaactcagagacccggccggcgcgggtc-------tcctga---------------gcccacttttctttctgtgtactttgtctctgtgtctctttcttttctcagtctctcgtcccacctgacaagaaacacccacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATCCTattttaggatggagcaggaagagcatgagagcccaggagttccagaccagcctgggcgacacaaggagaccttgtctctaTTTTTTAAGTAtttttaaagtaatatatacaacgtttacttgtcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatccactgcttcatatagttgcctttcgtttttgcagtgacaacgcttgatgtactt s ponAbe2.chr19 56776415 535 + 60714840 tgttcacatgttctccagctgaccctctccccactattaccctattgtcctgccacacccc--tctctgagatggtagagataatgatcaataaatactgaaggaactcag-gaccaggctggcgcgggtcctccgtatgctgagcgccggtccccagggcccacttttctttctctatattttgtctctgtgtc----tcttttctcagtctctcatcccacccgacaagaaacacctacaggtgtggaggggcaggccaccccttcaGTGAGGTATAATTACATATATACAattttaggactgagcaggaagagcatgtgagcccaggacctccagaccagcctgggcaacacaaggagaacttgtctctaTTTTTTAAGTAttttaaaagtaatatatacaatgtttacttatcaaagtgtacagcatggagcgatgttatatatacagtgaaatgattaccacaatccagctaattaacatatctgctgcctcatatagttgcctttcctttttgcagtgagaacgcttgatctactt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 657098 59 + 796479 agaaaaattcaggGTTTTTTggccaggcacggtggctcacgcctgtaatcccagcacta e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I e panTro4.chr19 59862159 0 + 63644993 C a score=23363.000000 s hg38.chr19_GL949753v2_alt 657157 268 + 796479 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcttgaacctgggaggcggagcttgcagtgagccaagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaaaagaaaagaaa s panTro4.chr19 59862159 261 + 63644993 tgggaggccgaggcgggcagatcacaaggtgaggagctcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaaaattagccaggcatggtggcgggcgcctgtagccccagctacttgggaggctgaggcaggataatggtgtgaacctgggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgagtgagactccctctcaaaaaaaaaaaaaaa-------gaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56776950 0 + 60714840 C e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=315912.000000 s hg38.chr19_GL949753v2_alt 657425 1247 + 796479 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-ggcctcccaagtagctgggattacaggtatgccccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttcttttttt--cttttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgccgggctagtttttgtatttttagtagagacagggtttcttgtttttttctgagatggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatccgcccgcctcggcctcccatagtgctgggattacaggcgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcagctgatccacccgcctcggcctcccaaagtgctgggatcacaggcgtgagccaccgcatctggccATTTACAttttttttttttttt--gatgcagcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccggcctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACtttttttttttttt------------- s panTro4.chr19 59862420 1219 + 63644993 agaaaaaTTCAGGGttttttttttctttttcagaa--agtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcttcccgggttcaagcgattctcctgcctc-agcctcccaagtagctgggattacaggtatgcgccaccacacctaattttttttgtatttttagtacaaacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggtatgagccaccaggcctggccAAGTATTTTTTTTCCCAAGTACAtttttttttcttttt-----ttttttgagatggagtctccctctgttgcccaggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcaccgcatcacgcctggctagtttttgtatttttagtagagacagggtttcttggttttttttgagacggagtcttgctctgtcacccaggctggagtgcagtggcgcgatctgggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactatgcccagctaattttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatctgcccgcctcggcctcccatagtgctgggattacaggcgtgagccactgcacccggccgagacagggtttctctatgttggccaggctggcctcgaactcctg----------------------------------------GGATCACAGGCGTGAGCAACCGCATCTGGCCATTTACAtttttttttttttttttgatgcggcatttcactctggttgcccaggctggagtgcagtggcgcaatctcagctcaccgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccagctaattttgtatttttagcagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcaggtgatctgaaagtgctgggattacaggcgtgagccaccgcgcccagccTACttttttttttttttttttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56776950 1253 + 60714840 agaaaaattcaggGtttcttttttctttttcagaaagagtcttgctctgtcgcccaggctggagtgcaatggtgcgaggcttaccacaacctcctcctcccaggttcaagcgattctcctccctcaggcctcccaagtaggtgggattacaggcatgcgccatcacacctaattttttttgtatttttagtacagacggggtttcaccatgttggccaggctgatcttgaactcctgacctcaggtgatctgcccgcctcagcctccgaaagtgctgggattacaggtatgagccaccaggcccggccAAGTA-TTTTTTTCCCAAGTACAtttttttcttttttttttttttttttgagacggagtctccctctgttgccca-gctggagcgcagtggcacaatctccactcactgcaacctccacctcccaggttcaagtgattctagtgcctcagcctctcaagaagctgggattacaggcgcactgcgtcacgcctggctagtttttgtatttttagtagagacagcatttctggtttttttttgagacagagtcttgctctgtcccccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcttcagcctcccgagtagctgggactacaggcgcctgccactatgcccatctaattttttttgtatttttagtagagacagggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccgagacagggtttctctatgttggccaggctggcctcgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacagttgtgaccaaccgcatctggccATCTACAttttttttttttttg-ggatgcgccgtttcactctggttgcccaggctggagtgcagtggctcaatctcagctcaccgcaacctctgcctcccgggttcaggtgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgcccagctaattttgcatttttaatagagatggggtttctccatgttggtcaggctggtctcaaactcccaatctcaggtgatctgaaagtcctgggattacaggtgtgagccaccatgcccagccTACtttttttttttttt-----------tt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e papAnu2.chr19 47848353 1593 + 51301725 I e macFas5.chr19 55743035 1534 + 59248254 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=2730.000000 s hg38.chr19_GL949753v2_alt 658672 3 + 796479 aaa s panTro4.chr19 59863639 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778203 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744569 3 + 59248254 aaa i macFas5.chr19 I 1534 C 0 s papAnu2.chr19 47849946 3 + 51301725 aaa i papAnu2.chr19 I 1593 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47557289 1464 + 50890351 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=18023.000000 s hg38.chr19_GL949753v2_alt 658675 18 + 796479 cagggtcttcatctcatc s panTro4.chr19 59863642 18 + 63644993 cagggtcttcatctcatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778206 18 + 60714840 cagggtctccatctcatc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55744572 17 + 59248254 cagggttacc-tctcatc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849949 17 + 51301725 cagggtcacc-tctcatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558753 18 + 50890351 cagggtcaccatctcatc i chlSab2.chr6 I 1464 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60602736 1680 + 64156825 I a score=968054.000000 s hg38.chr19_GL949753v2_alt 658693 574 + 796479 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggagtcgcactctgtctcccaggctggagtgcagtggcgcgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggctggtctcaaacttctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttatatttttttgtaatgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACA---TTAggccaggcgtggtggctcacacctggaatcccagcactttgggaggccgaggcagacagattac s panTro4.chr19 59863660 575 + 63644993 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctcctggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagatggagtcgcact--gtctcccaggctggagtgcagtggcacgatctcagctcattgcaacct-ccccctcctaggtttaagctattctcctgcctcaaccttccaagtaactgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacagggtttcaccattttgggcaggccagtctcgaactcctggcctcaagtgatccacccgcctcggcctcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagtgacagagttttaccatgttgcccaggctagtctcaatctcctgaactcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcacggtggctcacacctggaatcccagcactttgggaggccgaggcagacggattac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778224 578 + 60714840 caggctggagtgcagtggctcaatcacacctcattgcagcccccacctgccggctcaggtgatcctcccacctcaccccacaagtagcttggacacagcacaaggtctggccttctttgttttttgagacggggtcccactctgtctcccaggctggagtgcagtggtgagatctcagctcattgcaacct-ccccctcccaggtttaagctattctcctgcctcaactttcgaagtaactgggattacaggcatgcaccaccatacctggctaatttttgtgtttttagtagagatggggtttcaccattttgggcaggctggtctcgaactcctggcttcaagtgatccacccgcctcggcttcccaaagtgttgggataacaggcatgaaccactgtgcctggccttgtatttttttgtagagacagagttttaccatgttgcccaggctagtctcaatctcctgagctcCTCTAAACTATATTTGAAATAGAAGTCCTTAAGACAACATTAggccaggtgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggattac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604416 516 + 64156825 caggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctctctgcaacctccccccttcccggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttt----------------------------------------------------------tgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcaggcggatcac i rheMac3.chr19 I 1680 C 0 s macFas5.chr19 55744589 573 + 59248254 -aggctggagtgca-gtgcacaatcacacctcattgcagcccccacctcccgactcaggtgatcctcccacctcaccccacaagtagcctggacacagcacgcggtctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcacgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaacagggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctagtctcgaactcctggcctcaaatgattcgcccatctcggcctcccaaagtgttgggataacaggcatgagccattgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47849966 571 + 51301725 -aggctggagtgcaggggcacaatcacacCTCattgcagcccccacctcccgactcaggtgatcctcccacctcacctcacaAGTAGCCTGGACACAGCACGAGGTctggccttctttgttttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagctcactgcaacctccccccttccaggtttaagccattctcctgcctcaaccttccaactaattgggattacaggcatgcaccactacacctggctaacttttgtgtttttagtagagacggggtttcaccattttgggcaggctggtctcgaactcctggcctcaaatgattcgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agttttaccatgttgcccagactagtctcaaactcctgagctcctcTAAACTATATTTG-AATAGAAGTCCTTAAG---acattaggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47558771 571 + 50890351 -aggctggagtgcagtggcacaatcacacctcattgcagcccccacctcccggctcaggtgatcctcctacctcaccccacaagtagcctggacacagcatgaggtccggccttctttg--ttttgagacggagtctccctctgtgtcccagactggagtgcagtggcgcgatctcagttcactgcaacct-ccccctcccaggtttaagccattctcctgcctcaaccttccaactaactgggattataggcatgcaccaccacacctggctgatttttgtgtttttagtagagacggggtttcaccattttgggcaagctggtctcgaactcctggcctcaaatgatttgcccacctcggcctcccaaagtgttgggataacaggcatgagccactgtgactggccttgt-cttttttggagagac--agctttaccatgttacccagactagtctcaaactcctgagctcCTCTAAACTATATTTG-AATAGAAGTCCTTAAGACAACATTAggccaggcgcggtggctcacgcctggaatcccagcactttgggaggccgaggcagacggatagc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45910978 1761 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=462384.000000 s hg38.chr19_GL949753v2_alt 659267 232 + 796479 ctaaagtcaggagttcaagaccagcctggccaacatggtgagaccccgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagcgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- s panTro4.chr19 59864235 232 + 63644993 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggcggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgggtgaacccaggaggcggagtttgcagtgaaccaagatcacgccactgcactccagcctgggcgacagagggagactccatctcaaaaaaaaaaaa-------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56778802 232 + 60714840 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaatattagccaggcgtggtggcacatgcctgtaagcccagctactcaggaggctgaggcaggagaatggcggctgaaccctggaggcggagcttgcagtgagcccagatcgcgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaa-------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60604932 220 + 64156825 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtagtggcgggtgcctgtaatccccgctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcatgccactgtacgcgagcctgggca--agagtgagactctgactaaaaaaaaaaaaa-------------- i rheMac3.chr19 C 0 I 17 s macFas5.chr19 55745162 220 + 59248254 ctaaagtcaggagttcaagaccagcctagccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaa----------atcccaggaggcggaggttgcagtgagcagagatcacgccactgtacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47850537 220 + 51301725 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccaggtactcaggagactgaggcaagaaa----------atcccaggaggcagaggttgcagtgagcagagatcatgccactgcacaccagcctgggca--agagtgagactctgtctaaaaaaaaaaaaa-------------- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47559342 229 + 50890351 ctaaagtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggagactgaggcaagaaaa-atcacttgatcccaggaggcggaggttgcagtgagcagagatcatgccactgcactccagcctgggca--agagtaagactctgtcttaaaaaaaaaaaa-------------- i chlSab2.chr6 C 0 I 22 s calJac3.chr22 45912739 244 + 49145316 ctgaggtcaggaattcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaactagccaggtgtggtgatgcgtgcctgttatcacagctactcgggaggctaagacagaaga--atcactggaacccgagaggtggagtttacagtgggcggagatcccaccactgcactccagcctgggtgacggagtgagactctatctccaaaaaaaaaaaaaaaaaaaaaaaaa i calJac3.chr22 I 1761 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1368.000000 s hg38.chr19_GL949753v2_alt 659499 8 + 796479 a---------TCAAAGA s panTro4.chr19 59864467 17 + 63644993 aaaaaaaaaaTCAAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779034 10 + 60714840 a-------aTTCAAAGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745388 8 + 59248254 ---------agaaaaga i macFas5.chr19 I 6 I 10 s papAnu2.chr19 47850760 8 + 51301725 ---------agaaaaga i papAnu2.chr19 I 3 I 10 s chlSab2.chr6 47559593 8 + 50890351 ---------agaaaaga i chlSab2.chr6 I 22 I 10 s calJac3.chr22 45912983 8 + 49145316 ---------aTCAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605152 17 + 64156825 I a score=176666.000000 s hg38.chr19_GL949753v2_alt 659507 81 + 796479 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGCTTCTTCTCCCTTA s panTro4.chr19 59864484 81 + 63644993 TCCTTCCAGCATCCTCGCACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAACTTCTTCTCCCTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779044 84 + 60714840 TCCTTCCAGCACCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTATGGTGGTGGAAACTCAACCAATAATTTCTTCTCCCTTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605169 82 + 64156825 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTTAGGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i rheMac3.chr19 I 17 C 0 s macFas5.chr19 55745406 81 + 59248254 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i macFas5.chr19 I 10 C 0 s papAnu2.chr19 47850778 81 + 51301725 tcctTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAATGTCTTCTCCCTTA i papAnu2.chr19 I 10 C 0 s chlSab2.chr6 47559611 81 + 50890351 TCCTTCCAGCATCCTCACACCAACCATTAAGGCTT-GGGAAGGGCTA---TGGTGGAAACTCAACCAATAGTGTCTTCTCCCTTA i chlSab2.chr6 I 10 C 0 s calJac3.chr22 45912991 67 + 49145316 --------------TCACACCAACCGTCAGGGGTT-GGGAAGGGCCA---TGGGGGAAACTCAACCAATAATTACTCCTCCCCGG i calJac3.chr22 C 0 I 259 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=12834.000000 s hg38.chr19_GL949753v2_alt 659588 6 + 796479 AACGAG s panTro4.chr19 59864565 6 + 63644993 AACGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779128 6 + 60714840 AACGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60605251 6 + 64156825 AATGAG i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55745487 6 + 59248254 AACGAG i macFas5.chr19 C 0 I 119 s papAnu2.chr19 47850859 6 + 51301725 AACGAG i papAnu2.chr19 C 0 I 119 s chlSab2.chr6 47559692 6 + 50890351 AACGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913317 6 + 49145316 AAAGAA i calJac3.chr22 I 259 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=781.000000 s hg38.chr19_GL949753v2_alt 659594 1 + 796479 A s panTro4.chr19 59864571 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779134 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55745612 1 + 59248254 G i macFas5.chr19 I 119 C 0 s papAnu2.chr19 47850984 1 + 51301725 G i papAnu2.chr19 I 119 C 0 s chlSab2.chr6 47559698 1 + 50890351 G i chlSab2.chr6 C 0 I 119 s calJac3.chr22 45913323 1 + 49145316 G i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I e rheMac3.chr19 60605257 120 + 64156825 I a score=102333.000000 s hg38.chr19_GL949753v2_alt 659595 50 + 796479 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT s panTro4.chr19 59864572 50 + 63644993 AGACAAAGAAATCGATGCAAGAACCAGCACTCACCTCCCTCAGGTCAGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779135 50 + 60714840 AGACAAAGAAATCGATGCAGGAACCAGCACTTACCTCCCTTAGGTCAGGT i ponAbe2.chr19 C 0 I 121 s rheMac3.chr19 60605377 50 + 64156825 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i rheMac3.chr19 I 120 C 0 s macFas5.chr19 55745613 50 + 59248254 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47850985 50 + 51301725 AGACAAATAAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559818 50 + 50890351 AGACAAATGAATTGATTCAAGAACCAGCACTCACCTCCCTTAGGTCTGGA i chlSab2.chr6 I 119 C 0 s calJac3.chr22 45913324 49 + 49145316 AGACGAAGAAACTGATGCAAGCATCAGCACTCACCTCCGT-AGAGCAGGA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=2128422.000000 s hg38.chr19_GL949753v2_alt 659645 1072 + 796479 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCTAGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAACCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggatttggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGACCACCCGGGCCAGGTGTGATAGGCGACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---aaaaaaaaAGAGGACAAAAACTCCCGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaagccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaac-aaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gctcaggagtttgaggctgcagtgagctgtgactg-gccatctcactccagcctaggccacagagtgagacccagtctcaaaaaaa s panTro4.chr19 59864622 1073 + 63644993 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGGAACGGATAAAAAG-------GGGAGGTCT----CTGGCCCTTGGTACGCGGGGTGGAGAGACAGCTTTCCCGCCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCAcctgggccccatcctcagggattcggctgtaattgggcttcagtgggctttggagaattacggcttgctgaatctccccaggtgagattaatgtgcaATTCCCTTCCTAGAGCACCCGGGCCAGGTGTGATAGGCAACAGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTTAAAACTCTTGTAGAGa-aaaaaaattaaacaaaaataaa-----taaaaatt---ttttaaaaaGAGGACAAAAACTCCCATGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTggccaactgtggtgcctcctgcctataaatcccagcaggctgagaggcctaagccagtggatccctaggggccaggagtttgataccagcctaggcaacatagcaagatgccatctcttcaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtagtcccagcaatttgggaggccgaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacgtg-gtgaaactctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcgggaggctgagacaggacaatcacttgaactagggaggtggagggtg-agtgaggcacgatcacgccattgcactccagcctgggtgacaagagcaaga--ct-gtct----caaaaacaaaaacaaaaaaa-attagccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccagaagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctaggccacagagtgagacccagtctcaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56779306 1080 + 60714840 CTTGCTTCCAGCCTGTGTTTCCTGCAAAGGAAATGGATAAAAAG-------GGGAGGTCTCTGACTGGCCCTTGGTACGTTGGGTGGAGGGAGAGCTTTCCCACCCAGGGTGGAGCCGCCCCACTGAGATTAACATTGGGTGGCTCCCAACCACTGACCTCAGGCTCACCTTGACATCACCT-ggccccgtcctcagggattcggctgtaattgggctgcagtgcgctttggagaatcacggcttgctgaatctcccctggtgaaattaatgtgcaATTCCCTTCCTAGACCACCCGGGGCAGGTGTGATAGGCGACGGAACAGGAAA-TACACATTTTGGGTTTTGCAGGGTACCTGGCTCCCAGCTTTAAAAATTCTTGTAGAGa-aaaaaaaataaacaaaaataaa-----taaaaattaaaaaaaaaaaaGAGGATAAAACCTCCAGTGACTTCCTAAGTTACAAATACAATAAGTCTACTTTGTGGCCAACTATggttgctcctgcctataaatctcagcaggctgagaggcctaggccagtggatccctaggggccaggagtttgagaccagcctaggcaacagagcaagaagccatctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcacgcctgtagtcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttggaga-------------------------------ccagactggccaacatg-gtgaaaccctgtctc--------tactaaacatacaaaaaattagccaggtgtggtggcgggtgccta-aatcccagctactcgggaggctgagacaggacaatcacttgaactcaggaggtggagggtgcagtgaggcaagatcacgccattgcactctagcctgggtgacaggagcaagactct-gtct----caaaaacaaaaac-aaaaaa-attaaccatacatgatgggctgcacctgtaatcccagctattcaggaggctgaggtgggaggatcacctga------gcccaggagtttgaggctgcagtgagctgtgactg-gccacctcactccagcctgggccacagagtgagaccctgtctcaaaaaaa i ponAbe2.chr19 I 121 I 1391 s rheMac3.chr19 60605427 1082 + 64156825 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGa-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaaGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccaggagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctaatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55745663 1082 + 59248254 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgggctttggggaagcactgattgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAAGGTACCTGGCTCCCAGCTCTAGAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAGAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTggccaactgtggtggctcctgcctataaatcccagcaggccgagaggcctaggccagcagatctctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccagctacttgggaggctgagacacgagaatcacttgaacccaggaggcagaggttgcagtgacgtgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaagaac-aaaaaacattatccatacatgatggcctgcacctgtaatcccagctattcaggaggctgagctgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccaccccacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47851035 1082 + 51301725 CTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACACAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCACCTGGGCCCCATCCTCAGGGATTCAGCTGTAATTGGGCTGCAGTGGGCTTTGGGGAAGCACTGCTTGTTGAATCTCCCCAGGTGAGGTTAATGTGCAATTCCCTTCCTAGACCACCGGGGTCAGGTGTGATAGGTGACAGAACAGGAAA-TACACATTTTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAATgcttgcagaga-aaaaaaattaaacaaaaataaataaattaaaattt---ttaaaagaagaggataaaaaCTTTTGTGACTTCCTAAGTTACAAATAAAACAAGTCTACTTTGTGGCCAactgtggtggctcctgcctataaatcccagcaggCCGAGAGGCCTAGGCCAGCAGATCTCTagggaccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccaaggtgggtgtatcacctgatgtcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatat-aaaaattagccaggcgtggtagtgggtgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaaccctggaggcagaggttgcagtgaggcgagagcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaacattatccATACATgatggcctgcacctgtagtcccagctattcaggaggctgaggtgggaggatgacctga------acccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacagag-gagaccctgtctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47559868 1081 + 50890351 GTTGCTTCCAGCCTGTATTTTCTGCAAAGGAACTGGATAAAAAG-------GGGAGGTCTCTGATTGGCCCTCAGTACGCAGGGTGGAG----ACCTTTCCTGCCCAGGGTGGAGCCACCCCACTGAGATTAACATTGGGCGATTCCCAACCGCTGACCTCAGACTCACCTTGACATCAcctgggccccatcctcagggattcagctgtaattgggctgcagtgcgctttggggaagcacggcttgttgaatctccccaggtgaggttaatgtgcaATTCCCTTCCTAGACCACCAGGGTCAGGTGTGATAGGTGACGGAACAGGAAA-TACACATTGTGGATTTTGCAGGGTACCTGGCTCCCAGCTCTAAAAACGCTTGCAGAGA-AAAAaaattaaacaaaaataaataaattaaaATTT---TTAAAAAAAGAGGATAAAAACTTTTGTGACTTCCTAAGTTACAAATAAAGTAAGTCTACTTTGTggccaactgtggtggctcctgcctatagatcccaggaggccgagaggcctaggccagcggatccctaggggccaggagtttgagaccagcctaggcaacatagcaagatgcattctctacaaaaatatttaataattagccatgcataggctgggcgtggtagctcatgcctgtattcccagcactttgggaggccgaggtgggtggatcacctgagatcaggagttcaaga-------------------------------ccagcctggccaacatg-gtgaaaccctgtctc--------tactaaaaatac-aaaaattagccaggcgtggtagcgggtgcctctaatcccggctactcgggaggctgagacaggagaatcacttgaacccaggaggcagaggttgcagtgagatgagatcacgccattgcactccagtctgggtgacaagagcaaga--ct-gtctcaaacaaaaacaaaaac-aaaaaa-attatccatacatgatggcctgcacctgtaatcccagctattcaagaggctgaggtgggaggatgacctga------gcccaggagtttgaggctgcagtgagctgtgattgtgccacctcacttcagcctgggccacaaag-gagaccctgtctcaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45913373 1021 + 49145316 CTTGCTTCCGGCCGGTGTTTTCTGCGAAGGACTTGGGTAATAAGAGGGTCAGGGAGCTCTGGGATTGG-CCTGGGGACCCGGGGTGGAGGCAGGTGTTTCCCGCCCAGGGTGGAGCTG-CCCACCGAGATTAACACTGCTTGGCTCCCAACCACTGACCTCAGACTAACCTTGACATCAcctgggccccatcctccgggattcagctgtcattgggctgcagtgggctttgggg-agcagggcttgctgaaagtccccaggtgaggttaatgtgcag-----TTCCTAGACCACCGAGGTCAGGTGTGATCGGCGACAGAACAGGACATTATACATTTTCAGTTTTATGGGGTCGCTGGCTCCCAGCTCCAAAAACTCATGTAAAGAGAAAAAAATTAAACGTAAATAAA-------TGTTTT---TTAAAAAAA---GATAAA----------------------------------------------ggccgggcgtcgtggctcacgcctgta-atcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaatta-----------gctgggcatggtggtgcgtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcctgaacccaggaggcggagattgcggtgagcagagatcgtgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaaacaaaaccaaaccaaaaaaagataaa--aaGTCTTGTGACG---gcctgtaatcccagcactttgggaggcggaagtgggtggatcac--gaggtcaggagttcaaga-------------------------------ccagtctggccaatatgatgaaac--ctcatctctactaaaaat-------acaaaa-attatctgggcatagtggcatgtgcccgtaatcccagctactcgggaagctgaggcaggagaatcgcttgaaccgggacctgggaggcggaggttacagtgagccaagattgagccacctcactccagcctgggctacagagaaagactccgtctcaaaaaga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=6926.000000 s hg38.chr19_GL949753v2_alt 660717 11 + 796479 taaaTAGATAA---- s panTro4.chr19 59865695 11 + 63644993 taaaTAGATAA---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606509 7 + 64156825 ----taaataa---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746745 7 + 59248254 ----taaataa---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852117 7 + 51301725 ----taaataa---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560949 7 + 50890351 ----taaataa---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45914394 11 + 49145316 ----taaaaaaagaa i calJac3.chr22 C 0 I 7610 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=461783.000000 s hg38.chr19_GL949753v2_alt 660728 360 + 796479 CTGATATTTAA------tttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctccattc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcttcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagagacagggtttcaccatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCGCACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA s panTro4.chr19 59865706 361 + 63644993 CTGATATTTAA-----ttttttttttttggatggagtcttgctctgtggcccaggctggagtgcagtggtgcaatctcggttc-ttgcaacctctgccttccaggttcaagcaattctgatgcctcagcctcccaagtagctgggactgcaggcacatgccaccatgcccaactaattttttgtatttttagtagaggcagggtttcactatattggtcaggctggtctcaaactcctgatgtcaggt--------------------------------gatTACAGGCATGAGCCACCACACCTGGCCTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAACATTCAGCACAGAATTTTGGTAGTTTAAACTGTTAATTTAATGGAAGCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60606516 392 + 64156825 CTGATATTTAA--TGttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggccttccaaagtgctgggattacaggcaggagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55746752 394 + 59248254 CTGATATTTAAttttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgctccccaggttcaagcaattcttgtgcctcagcctcccgagtagctgggactgaaggcacacaccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcaatccacccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcacctggccTAAAATTGTTTTTAAATAAAACAGCGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAACGGAAGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852124 392 + 51301725 cggatatttaa--ttttttttttttttgagatggagtctcgctctgtggtccaggctggaatgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcgtgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcgaactcctgatgtcgggtgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccactgcacctggcctaaaattgtttttaaataaaacagtgtATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47560956 391 + 50890351 CTGATATTTAA---tttttttttttttgagatggagtctcgctctgtggtctaggctggagtgcagtagtgcagtctcagttcactgcaacctccgcttcccaggttcaagcaattctcatgcctcagcctcccgagtagctgggactgcaggcacatgccaccatgcctgactaattttttgtatttttagtagagacggggtttcaccatattggccaggctggtctcaaactcctgatgtcaggcgatccacccacctcggcctcccgaagtgctgggattacaggcatgagccaccacacctggccTAAAATTGTTTTTAAATAAAACAGTGTATGTTGTGGAAAGCATTCAGCACAGAATTTTGG-----TAAACTGTTAATTTAATGGAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56780386 1391 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=917661.000000 s hg38.chr19_GL949753v2_alt 661088 559 + 796479 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATCTATAGAAATAGGCACTATGGAggcctggcatggtggctcacacctgtaatccctgcactttggaaggctgaggcaggtggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcgtaagaattgattgaacctgggagttggaggttgccgtgagccgagattgcaccactgcgctccagcctgggcgacagagactccatcttt------aaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaagaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAA-----AGAGAGAGAGAGTATATTTTGTT s panTro4.chr19 59866067 569 + 63644993 AATGGTCCCACAAATGAAGATGTAAATATCAGTTGCAGCGTGCCATCTACAGAAACAGGCACTATGGAggcctggcatggtggctcatgcctgtaatccctgcactttggaaggctgaggcagctggatcatctgaggtcagcagttcgagaccaacctgggcaacatggcaaaa-aa-cc----cctggctactaaaaat-aaagaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagttggaggttgcagtgagccgagattgcaccactgcgctccagcctgggagacagagacaccatctttaaaaaaaaaaaaaaaaa------------aaaaagaTggccaggcgcagtggttcatgaatgtaatcccagcactttgggaggctgaggcaggaggactgcctgagtccaggagttcaagaccagcctgggcaatatggcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA-AAGAGAGAGAGAGAGTATATTTTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56781777 558 + 60714840 AATGGTCCCACAAATGAAGATGTATATATCAGTTGCAGCATGCCATTTATAGAGATAGACACTATGGAggctgggcacggtggctcatgcctgtaatccctgcactttggaaggctgaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatggcaaaaccc-cc----cctggcaactaaaaat-aaaaaattagccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggaggcggaggttgcagtgagccgagattgcacgactgcgctccagcctgggcgacagagactccatctt---------aaaaaacaa------------aaaaaGATggccaggcgcaatggttcatgaatgtaatcccagcactttgggaggctgaggcgggaggactgcctgagtccaggagttcaagaccagcctgggaaatattgcgagactccctctctgaaaaaaaagaaaaTAAAAACAATAAAAATAAATTATATTCTAGCTGAC--AAAAA----AAAGAGAGAGAGTATATTTTGTT i ponAbe2.chr19 I 1391 C 0 s rheMac3.chr19 60606908 585 + 64156825 AACGGTCCCACAAATGGAGACGGATATATCAGCAGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtgtatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt--aaaaaaaaaaaaaaaaaGAGAGAGAGAGAGAGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC-AAAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i rheMac3.chr19 C 0 I 308 s macFas5.chr19 55747146 582 + 59248254 AATGATCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACTGTGGAggccggacacggtagctcacgcctgtaatccctgtacttcggaaggccaaggtgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggagaatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaaagagagagagagagaGAGATggccagccgcagtgattcacgaatggaatcccagcattttgggaggctgaggcgcgaggatggcctgagtccaggagttcaagaccagcctaagtgacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATCAAAATAAATTCTATTCTAGCTGAC--AAAAAAAAAAAAGAGAGAGAGTATATTTTGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47852516 579 + 51301725 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTATAGAGACAGGCACtgtggaggccgggcacggtagctcacgcctgtaatccctgtacttcggaaggccaaggcgggtggatcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-caccCCCCTCctcgctactaaaaat-aaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctgggagccggaagatgcagtgagcccagattgtaccactgcactccagcctgggcgacagagactccatctt----aaaaaaaaaaaaaa----agagagagagagagatggccaGCTGCAGTGATTCACGaatggaatcccagcattttgggaggctgaggcgggaggatggcctgagtccaggagttcaagaccagcctgagtgacacggtgagactccctctctgaaaaaaaagaaaataaaaacaatcaaaataaattctattctagctgac--aaaaaaaaaaaagagagagagtataTTTTGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561347 546 + 50890351 AATGGTCCCACAAATGGAGACGGATATATCAGCGGCAGCATGCCAGCTGTAGAGACAGgcactgtggaggccgggcacgg------------------cctg-------------------------agcatctgaggtcaggagttcgagaccaacctgggcaacatgacaaaa-ca-ccccctcctcgctactaaaaatgaaaaaattagccaggcatggtgctatgcacctgtaatcccagctactcaggaggctgaggcatgagaattgattgaacctggaaggcggaggttgcagtgagcccagattgcaccactgcactccagcctgggcgacagagactccatcttaaaaaaaaaaaaaaaaaaaaagagagagagagagagaTggccagtcgcagtgattcacaaatgtaatcccagcattttgggaagctgaggcacgaggatggcctgagtccaggagttcaagaccagcctgagcaacatggtgagactccctctctgaaaaaaaagaaaaTAAAAACAATGATAATAAATTCTATTCTAGCTGACCAAAAAAAAAGAGAGAGAGAGAGTATATCTTGTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=1378495.000000 s hg38.chr19_GL949753v2_alt 661647 782 + 796479 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATACATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgagggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggtgtcctgtggctcatgcccgtaatcccaacgctttggg--aggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggagacagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-------------aaaaaa-----aaaaaaaaccaggaaagagttcagaagagcttcctggttggtgaacccgggtgcattcgtgtgccaggactgtggtgcaccccaggtccacagggacagaagctcctgcacttcggactcctctaaacctccccctacgcatctcttccttggctgttcattt s panTro4.chr19 59866636 793 + 63644993 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAGAGATAAACATGAAAGAGGTATCTCTTGTTATGCATACCCAGGCCCTGCAACCACACCTGAGtttatgtaaatgaggtgacttttggaaagcccctagataaccccacaagtgcgggggactggctgccaaagaaaccatcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaacctcaaaagaaaagggtttgggccgggcgtcatttggctcatgcctgtaatcccaacactttgggtagggcctagatgggaggattgcttgagcccaagaattctaggccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgtagacccagctactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagttagactgtctc-aaaaaaaaa---aaaaaa-----aaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaacccgggtgcatccgtgtgccaggactgtggtgcaccccaggtccacagggacagaagcttctgcactttgggctcctctaaacctccccctacgcatctcttccttggctgttcattt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56782335 799 + 60714840 AAAACATTTGGCCTTTAGTCCTAGAGCAGCTATGGAAAGATAAACATGAAAGAGGTATCTCTTGTTTTGTATACCCAGGCCCTACAACCACATCTGAGCttatgttaatgaggtgacttttggaaagcccctagataaccccacaagggcgggggactggctgccaaagaaaccgtcagtgattagacattgggaactttcagccccaggctccaagtggcctccagggaggggagaggggctgaaggttgaattgattatgaactgccagctatgtg---atcagcattgcccacctaaggaatcctccataaaccccaaaagaaaagggtttgggccgggcatcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggactgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac----aaaaaataaaaaattagccaggcgtggtggagtgcacctgcagacccagatactcaggaggctgaggcatgagaatcacttgaacgcaggaggcagaggctgcagtgagctgagatagcgccactgcactccagcctgggtgacggagtgagactgtctc-aaaaaaaaaaacaaaaaacaaacaaaaaaaaacaggaaagagttcagaagagcttcctggttggtgaatcggggtgcatccgtgtgccaggactatggtgcaccccaggtccacagggacagaagctcctgcacttgggactcctctaaacctcctcctgtgcatctcctccttggctgttcattt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60607801 786 + 64156825 aaaGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggcgccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaatgagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc-----aaaaa---aaaaaa-----aaacaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggcccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i rheMac3.chr19 I 308 C 0 s macFas5.chr19 55747728 791 + 59248254 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaagggcgggggactggctgccgatga------caacgattagacattaggaactttcagccccaggctccaagtgtcctccagggaggggagaggctccgaaggttgaattgattatgaactgccagctatgtgatcatcagcatagcccacctaaggaatcctccagaaactccaaaaggaaagggtttgggccgggcgtcctgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaagatagcaagaccctagctctac--aaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggaccccgctactcaggaggctgcggtgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctcaaaaaaaaaa---aaaaaa-----aaaaaaaaacacgaaagagttcagaagagcttcctggttggtgaactggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctgaacctcccccaatgcatctcctccttcactgttcattt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47853095 770 + 51301725 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAGGTAAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTCCAACCACACCTGAGTTTATGTTAACGAGGTGATTTTTGGAAAGCCCCTAGATAACCCCACAAGGGCGGGGGACTGGCTGCCGATGA------CAACGATTAGACATTAGGAACTTTCAGCCCCAGGCTCCAAGTGGCCTTCAGGGAGGGGAGAGGCGCTGAAGGTTGAATTGATTATGAACCGCCAGCTATGTG---ATCAGCATTGCCCACCTAAGGAATCCTCCAGAAACTCCAAAAGGAAAGGGTTTGGGCCGGGCAtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggaatgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctacaaaaaaaaaatgaaaaattagccaggcatggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaacgcaggaggcagaggctgcagtgagttgagatcacgcca--------cagcctgggtgacggagtgagactgtctc---------------aaaa-----aaaaaaaaacacgaaagaGTTCAGAAGAGCTTCCTGGTTGGTGAACCGGGGTGCACCCATGTGCCAGGACTGTGGTGCACCCCAGGTCCACAGGGACAGAAACTCCTGCACTCGGGACTCCTCTAAACCTCCCCCAATGCATCTCCTCCTTCGCTGTTCAttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47561893 783 + 50890351 AAAGCATTTGACCTTTAGTCCTAGAGCAGCTATGGAGAGAGAAAAGTGAAAGAGGTATCTCTTGTTATGCATGGCCAGGCCCTACAACCACACCTGAGtttatgttaacgaggtgatttttggaaagcccctagataaccccacaatcgcgggggactggctgccgatga------cagcgattagacattaggaactttcagccccaggctccaagtggcctccaggaaggggagaggcgctgaaggttgaattgattatgaaccgccagctatgtgatcatcagcatagcccacctaaggaatcctccataaactccaaaaggaaaaggtttgggccgggcgtcatgtggctcatgcctgtaatcccaacactttggg--aggcctagatgggaggattgcttgagcccaagaattctagaccagtctggacaaaatagcaagaccctggctctac-aaaaaaaaatgaaaaattagccaggcgtggtggagtgcacctgtggacccagctactcaggaggctgaggcgtgagaatcacttgaatgcaggaggcacaggctgcagtgagttgagatcacgccactgcactccagcctgggtgacggagtgagactgtctc---------a---aaaaaa-----aaaaaaaaacatgaaagagttcagaagagcttcctggttggtgaaccggggtgcacccatgtgccaggactgtggtgcaccccaggtccacagggacagaaactcctgcactcgggactcctctaaacctcccccaatgcatctcctccttcgctgttcattt i chlSab2.chr6 C 0 I 2884 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I a score=20176.000000 s hg38.chr19_GL949753v2_alt 662429 16 + 796479 gtatcctttaaaatat s panTro4.chr19 59867429 16 + 63644993 gcatcctttaaaatat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783134 16 + 60714840 atatcctttaaaatat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60608587 16 + 64156825 acatcctttaaaatat i rheMac3.chr19 C 0 I 3003 s macFas5.chr19 55748519 16 + 59248254 atatcctttaaaatat i macFas5.chr19 C 0 I 2920 s papAnu2.chr19 47853865 16 + 51301725 atatcctttaaaatat i papAnu2.chr19 C 0 I 5245 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I a score=178653.000000 s hg38.chr19_GL949753v2_alt 662445 735 + 796479 gaaagggcgggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaataaggggacccaggggaccagcattcagcatatggaggatcccgccagcttctgagttcccttagtatttattgatcattttggggtgtttctcagagagggggatgtggcagggtcataggataatagtggagggaaggtcagcagataaacacgttaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcatacacataaacatctcaatgccttacggagcagtattgctgcccgcatgtcccacctccagccctaaggcggttttcccctatctcagtatatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgccttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatccgcctcagcacagaccctttactggtgtcgggctgagggacggtcaggtctttcccttcccatgagaccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtccctgcggccttccgcagtgtttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg s panTro4.chr19 59867445 735 + 63644993 gaaagggcaggttgcccctccacacctgtgggcatttctcgttaggtggaaggagagacttggaaaagaaagagacac--agacaaagtatagagaaagaaaaaagggggcccaggggaccagcgttcagcacacggaggatcccgccagcttctgagtttccttagtatttattgatcattttggggtgtttctcggagagggggatgtggcagggtcataggataatagtggagagaaggtgagcaggtaaacacataaacaaaggtctctgcatcatagacaaggtaaagaactaagtgctgtgctttagatatgcacacgcataaacatctcaatgccttacagagcagtattgctgccctcaagtcccacctccagccctaaggcggttttcccctatctcagtagatggaatatacaatcggggtttacacccatacattccattgcccagggacgagcaggagacagatgacttcctcttgtctcaactgcaaagaggtgttccttcctcttttactaatcctcctcagcacagaccctttacgggtgtcgggctgggggacggtcaggtctttcccttcccacaaggccata--tttcaggctatcacatggggagaaaccctggacaatacctggct--ttcctaggcagaggtctctgcggccttccgcagtttttgt--gtccctgggtacttgagattagggagtggtga-tgactcttaaggagcatgctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56783150 741 + 60714840 gaaggggtgggttgcctctccacacctgtgggcatttctcgttaggtggaacaagagacttggaaaagaaagagacacagagacaaagtatagagaaagaaaaaagggggcccaggggagcggcgttcagcacacggaggatccc-caggcctccgagttcccttagtatttattgatcattcttcagtgtttctcggagaggaggatgtggcaggatcacaggataatagtggagagagggtcagcaggtgaacacgtgaacaaagg--tctgcatcatagacaaggtaaagaattcagtgctgtgctttagatatgtatacacataaacatctcagtgccttgaagagcagtattgctgccctcatgtcccacctccagccctaaggctgttttcccctatctcagtagatggaatatacaatcggggtttacacccagacattccattgcccagggacgagcaggagacagatgccttcctctggcctcaactgcaaagaggccttcctttctcttctactaatcctcctcagtacagaccctttacgggtgttgggctgggggacggtcagatctttcccttcccaggaggccatatctctcaggctatcacatggggagaaaccttggacaatacctggctaagggcaaggcagaggtccctgcggccttccgcagtgttttttaatcgctgggtacttgaaattagggagtggtgagtgactcttaactagcatgctg i ponAbe2.chr19 C 0 I 7626 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=314621.000000 s hg38.chr19_GL949753v2_alt 663180 3528 + 796479 ccttcaagcatttgtttaacaaagcacatcttgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatgaagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccagcccagccagcatggtgaaactgcgtctctacaaaaatacaaaaattagcggggcatggtagttcaacgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacccgggaggcagaggcagaggttgcagtgagccgaggtcgcacgactgcactccagcctgggtgcaacagagtgagactccatctcaaaaaacaaaaaacaaaaacaaaaacaaaacaaaaaatgaaaacccacttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacatcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagacgaa--tttttttttttttttgagacggagtctcgctctgtcgcccaggctggagggcagtggcgcaatctctgctcactgcaagctccgcctcccgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaaccatgcctggctaattttttttgtatttttagtagagacgcggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatcctcccgcctaggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacaaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatggtttcagatgtttttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagtgaggaatgggatcagcatgagaacactgcgtcttcatgcccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccccggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggaggcggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaa--aaaaaaaaaccctagacccaaacttctgggggagatggattggaggtttcctcccatctcctcattcctcagccctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctgagacctaccgggctgcattcccagacagttaaggcattctcca--------aaaaaaacaaaaatgacaggcacggtggcccagcactttgggaggccgaggcgggtggattacccgaagtagagtttgagaccagcctggccaacacggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccacctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaag-aaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtagcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttatccggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgtgcgtgagagggtcgtgatcgactgagcaagcagggggtacgtgactgggggctgcatgcactggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagataaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgccgggctgtctgcttgtggatttcattcctgggccgcggggc------------------------------------tgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacacctgtaatcccagcactttcgggggctgaggcgggtggatcacacggtcaggagattgagaccatcctggctaacacggtgaaa--ccatctctactaaaaaaaaaaaatacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggtgatggagcttgcagtgagcggagatcgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaataaaaaataaataaaaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgctccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgctgtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtgg-tcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaatcccatctctactaaaaaaaaatacaactaattagctgggtgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctcaaaaaaaaaaaaaaaaaaa s panTro4.chr19 59868180 3545 + 63644993 ccttcaagcatctgtttaacaaagcacaccctgcacagcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcatagattaacagcatctcaaggcagaagaatttgtcttagtacagaacaaaatggagtctcctgtgtctacttctttctacacagacacagttacaatctgatctctctttcttttccccacaAAAATATCCTTTGTAgaccaggcacagtggctcaggcctgtaatcccagcactttgggaggctgaggcagatggatcacttaaggtcaggagtttgagaccag-ccagccaacatggtgaaactgcgtctctacaaaaatacaaaaattagccgggcatggtagctcaatgcctgtaatcccagctactcgagaggctgaggcagaattgtttgaacctgggaggcagaggcagaggttgcagtgagccgagatcgcacgactgcactccagcctgggtgcgacagagtgagactctatctcaaaaaac------taaaaacaaaaacaaaacaaaaaaTGAAAACCCGCttttagtaaaaaaaataaaaatgaaaaaatgtgaatcaggctgcactctggcccacgtcctggctgctgtgtatcacgtggctctagacactgcacttttgcctcctcatcattgctgtagataggatttctgacagcagggtcattagatgaatttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcaatggcgcaatctctgctcactgcaagctccgcctcctgggttcacacaattctcctgcctcagcctcccgaatagctgggactacaggtgcctgcaacaatgcccggctaattttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccccattagacgaatttgtatctgcacggttcctacagataaactctgggacattagaattataaggcttttgtttaaggatgg-----------tttcagaccttgaattccagccaaatagctgacactaaccagtttgaagaccccagcgaggaatgggatcagcatgagaacaccgcgtcttcatgtccctgtctccgccagcagtcagcatggccacactctggcccacaccaaaacacttaaaaaccctagccctggccgggtgcagaggctcacacctgtaactccagcactttgggaggccaaggcaggtgaatcacctgaggtcaagagttcaagaccagcctggccaacatagtgaaaccccgtttctactaaaaacacaaaaaattagtcgggcgtggtagcgggtgcctgtaaccccagctactcaggaggctgaggcaagagaattacttgaacctgggagggggaggttgcagtgagcaaagatcctgccactgcactccagcctgggtgacaaagcaaaactccatctcaaaaaacaaaaaaaaaccctagacccaaacttctggggcagatggattggaggtttcctcccatctcctcattcctcagtcctgtgattaaacttccttctcttctgcaacacagtgacccggcaaattgactcacagcgtgcattgggcaacggacctactgtcagaggcgtgtaaccagggcaactccatcttgaataggagctgactaaaataaggctaagacctaccgggctgcattcccagacagttaaggcattctccaaaaaaaacaaaaaaacaaaaatgccaggcacggtggcccagcactttgggaagccgaggcaggtggattacccgaagtagagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaattagtcaggcgtggtggctcgtgcctgtaatcccagctacttgcgaggctgaggcaggagaatcgcttgagccggggaggcggaggttgcagtaaaaagaaaaaaaaaaagcattctaagtcacaggatgagataagtcagcacaagatacaggtcataaggaccttgctgataacacaggtcgcaatgtagcaggaccagccacagacaaaactcctcagacaccgagttaaagaagaaaggggtttattcggccaggggcatcggcaagactcccgtctcaagagccgagatccccaagtgagcaattcctgtcccttttaagggctcacaactctaagggggtgcgcgtgagagggtcgtgatcgattgagcaagcagggggtacgtgactgggggctgcatgcaccggtaatcagatccaaacaaaacaggatagggattttcacagtgcttttctatacaatgtctgtaatctatagatgaccgattaggtcaggggtcaatctttaactaccaggcccagggtgtggcgcggggctgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcattcctggggcgccgggatgtctgcttgtggatttcattcctggggcgcggggctgtctgcttgtggatttcatttctgccttttagtttttactttttctttctttggaggtggaaattgggcataagacaatatgaggggtggtctcctcccttagcaataaagaatccagccaggccgggcgcggtggctcacgcctgtaatcccagcactttggggggccgaggcgggcggatcacaaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctctact-------aaaaatacaaaaaattagccgggcttggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggtgatggagcttgcagtgagccgagatcgcgccaccgcactccagcctgggtgacagagcaagactccgtctcaaaaaaataaaaaat------aaataaataaagcatccagtcaaactccatcaaaaccaagatagtgacgagagtaacctctggttgtcctcaccgttccactcccagcagccccatgacagtttacaaatgccatggcaatgtcaggaagttaccctatgcggtctaaaaaggggaggcatgaataatccaccccttgtttagcatatccatagaaataaccataaaaatgggcaaccggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcc-aggcgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctact-aaaaaaaatacaacaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccgagatagtgccactgcactctggcctggtgaaagagcgagactccgtctc--aaaaaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56783891 7626 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47562676 2884 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55748535 2920 + 59248254 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=174656.000000 s hg38.chr19_GL949753v2_alt 666708 235 + 796479 aaaaaGGGCAACCGAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcaagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactgaagtgattcaag s panTro4.chr19 59871725 235 + 63644993 aaaaaGGGCAACCAAggccggacgtggtggcttacgcctgtaatcccaacactttgggaggccgaggcgggcatatcacctgagctcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacgtgatggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcaagtgattcaag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791517 228 + 60714840 aaaatgggcaaccaaggctgggcttggtggctcactcctgtaatcccaacacttcaggaggctgaggcgggcagatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaatacaaaaattagccagacctgatggcaggcgcctgtaatcccagctactcaggaggccgaggcaggagaatcacttgaacccagg-------aa i ponAbe2.chr19 I 7626 C 0 s macFas5.chr19 55751455 221 + 59248254 aaaatgggcaaccaaggctgggtgtggtggctcacgcctgtgatcccaaccctttcagaggcctacacaggtggatcacctgaggtcaggaggtcgagatcagcctggccaacatggtgaaaccccatctcttactaaaaataaaaaaattag-------tgatggcgcgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccggg-------ag i macFas5.chr19 I 2920 C 0 s chlSab2.chr6 47565560 221 + 50890351 aaaatgggcaaccaagaccgggtgtggtggctcatgcctggaatcccaacactttcagaggcctatgcaggcagatcacctgaggtcaggaggtggacatcagcctggccaacatggtgaaacctcatctcttactaaaaatacaaaaattag-------tgatggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccagg-------ag i chlSab2.chr6 I 2884 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60608603 3003 + 64156825 I a score=331917.000000 s hg38.chr19_GL949753v2_alt 666943 283 + 796479 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaactagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgcttccactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac s panTro4.chr19 59871960 283 + 63644993 gcagaggtttcagtgagccaagatcacgccactgcactccagcctgggcgacaagagcaaaactccatctc--aaaaaaaataagggcaaccagcagccctatgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatagtctcgccctgaattctttctggtatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAATATCATTGGTggccgggcgcggtggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56791745 282 + 60714840 gcagaggttgcagtgagccaagatcacaccattgcact-cagccggggcgacaaaagcaaaactccatctc--aaaaaaaataagggcaaccaggagccctacgggctgctgtctatggagtagctattcttttactccttcactttcctaataagcttgctttcactttactccatgatcttgccctgaattctttctggcatgagattcaagaacccACCATGCCCAGCTCGTCCTTACTTGCTTTTAAAAAGTATCATTGCTggccgggcgcggtggctcac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611606 274 + 64156825 gcagaggttgcagtgagccgagatcgcgccattgcactccagtcttggcaataagagtaaaactccctctcaaaaaaaaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTGgctggacatggtggctcac i rheMac3.chr19 I 3003 C 0 s macFas5.chr19 55751676 274 + 59248254 gcagaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaagagcaaaactccatctcaaaaaacaaataagggcaaccagcagccc-----------gtctatggagtagctattcttttattcgttcactttcctaataagcttgctttcactatactccatggacctgccctgaattctttctggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTGCTTTTAAAAAGTATCATTGGTggctggacaccgtggctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47565781 274 + 50890351 gcggaggttgcagtgatctgagatcacgccattgcactccagcctgggcaacaaaagcaaaactccatctccaaaaaaaaataaaggcaactagcagccc-----------gtctgtggagtagctattcttttattccttcactttcctaataagcttgctttcactatactccatggacctgccccgaattctttccggcgtgagattcaagaacccactATGCCCAGCCCATCCTTACTTACTTTTAAAAAGTATCATTGGTggccggacacagtggctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=110530.000000 s hg38.chr19_GL949753v2_alt 667226 136 + 796479 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt s panTro4.chr19 59872243 136 + 63644993 gcctgcaatcccagcactttgggaggccaaggctggcggatcacctgaggtccgaagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaatac-aaaaaaattagctgggtgtggtggtgcgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792027 137 + 60714840 gcctgtaatcccagcacttcaggaggccaaggctggcagatcacctgaggtcagaagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaatacaaaaaaaattagctgggcgtggtggcacgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55751950 137 + 59248254 gcttgtaatcccagcactttgggaggacaaggcgagcggatcacctgaggtcagatgttcaagaccagcctgaccaacatggagaaactccatctgtactaaaatacaaaaaaaatcagctggctgtggtggtgcat i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566055 137 + 50890351 gcctgtaatcccagcactttcggaggccaaggcgggcggatcacctgaggtcagacgttcgagaccagcctgaccaacatggagaaaccccatctgtactaaaatacaaaaaaaattagctgggtgtggtggtggat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60611880 0 + 64156825 C a score=172977.000000 s hg38.chr19_GL949753v2_alt 667362 145 + 796479 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccaagatcatgccattgcactccagcctgggcaacaagagtgaaactccgtctcaa------------------------------------aaataaataaataaa s panTro4.chr19 59872379 145 + 63644993 gcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggtggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactctgtctcaa------------------------------------aaataaataaataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792164 157 + 60714840 gccggtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccccggtggcagaggttgcagtgagccgagatcatgccattgcactccaacctgggcaacaagagtgaaactctgtctcaa------------------------aaataaataaataaataaataaataaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60611880 145 + 64156825 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctgggcaacaagagtgtaactccatctcaa------------------------------------aaataaataaataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55752087 181 + 59248254 gcctgtaattccagctacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagatcgcaccactgcactccagcctggacaacaagagtgaaactgcatctcaaaactaaataaataaataaataaataaataaataaataaataaataaataaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47566192 144 + 50890351 gcctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggtggcagtgagccgagagcgcaccactgcactccagcctgggcaacaagagt-taactccatctcaa------------------------------------aaataaataaataaa i chlSab2.chr6 C 0 I 1756 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=175847.000000 s hg38.chr19_GL949753v2_alt 667507 222 + 796479 aTCATTGGAATAATTTTCTTCTTTAGGAAGAGCAGCCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggcagcccaggtaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgatgaaacctcttcttgatcaaatatacagaatttcgactgagcacagtggctgtaagcccagcatgttgggaagctgaggt s panTro4.chr19 59872524 222 + 63644993 aTCACTGGAATAATTTTCTTCTTTAGGAAGAGCAGTCTTGggccaggcatggtggcacatgcctggaatccccgaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacgaaacctcttcttgatcaaatatacaaaaTTTCGACTGAGCACAGTGGctgtaagcccagcatgttgggaagctgaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792321 222 + 60714840 ATCATTGGAATAATTTTCTTCTTTAGGAACAGCAGCCTTGggccaggcatggtggcacatgcctggaatcccagaactttgggaagcccaggcaggtggattgcttgagtt----------caagagttccagaccagcctggacaacatgacaaaacctcttctccatcaaatatacaaaatttcgactgagcacagtggctgtaatctcagcacattgggaagccgaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60612025 229 + 64156825 aTCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaatataccaaatttcgattgagcctggtggctgtaatcccagcatgttgggaagccgaggT i rheMac3.chr19 C 0 I 1441 s macFas5.chr19 55752268 228 + 59248254 ATCAGTGGAATAATT---TTCTTTAGGAAGAGCAGCCTTGAgccaggcatggtggcacatgcctggaatcccaggactttgggaagcccaggcaggtggattgcttgagcttccacctgcctgggagttccagaccagcctgaacaacatgacaaaacctcatctcaataaaaTATACCAAATTTCGATTGAGCCTGGTGGctgtaatcccagcatgttgggaagccgagg- i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I a score=70725.000000 s hg38.chr19_GL949753v2_alt 667729 211 + 796479 gggtgaatcatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaatcccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacagcaagact s panTro4.chr19 59872746 211 + 63644993 gggtgaataatttgaggtcagaccagcctgactaacatggcgaaaccccatctctacaaaaaatacaaaagttagccagga--ggtcgtgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatgacgtgaaccccggagtcgtaggttgcagtgagccaagatcgtgccactgcacttcagcctgggcgacacggcaagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56792543 211 + 60714840 gggtgaatcatttgaggtcagaccagtctgactaacatggtgaaaccccatctctactaaaaatacaaaaattagccagga--ggtggtgggcgcccgtggtcccagctactcgggaggctgaggcagaagaatggtgggaacccgggaggcggagcttgcagtgagccgagatcatgccactgcactccagcctgggcgaaagagcaagact i ponAbe2.chr19 C 0 I 1814 s macFas5.chr19 55752496 139 + 59248254 ----------tttgaagtcagaccagc----ctaacatggtgaaaccccatgtctactaaaaatacaaaaattagccaggcatgggggtgaacgtccataatctcagctactcgggaggctgaggcatgacaatcacttgaacccgggaggct------------------------------------------------------------ i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=212369.000000 s hg38.chr19_GL949753v2_alt 667940 984 + 796479 gaggttgcagtgagctgtgatcctcaacctcctgggttcaagggattgtcgagcctcagcctcccaagtagctgggattatagacattcgctcccatgcctggctaatttttgtattGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaaaaataaataaataaataaataaataGCCAACTgtgatcgtgcatgcctgtagtcccagctactcaggaggccaaggcaggaggatcacttgagactgggaggtcatggctacagtgagccatgatctcgcaactgcactccagcctgggcaacagagggagaGA--------------------------------------------------------------------------------------------------------------------aaggaaggaaggagggaaggagggaaggagggaagggaaggagggaaaggaagtcagtcttgtgggacaaggaaggaaggaagga----agTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggtatggtggttcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaaccccatctctactaaaaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT s panTro4.chr19 59872957 990 + 63644993 GGGGTTGCAGTGAGCTGTGATcctcaacctcctgggttcaagggattgtcgagcctcagcctcccgagtagctgggattatagatgttcgctcccatgcctggctaatttttgtatCGCAAAAATGCACTCCagcctagatgacaggactgcactccagcctggatgacagagcaagactgtgtctcaa----aaataaataaataaataaataGCCAACTgtgatggtgcatgcctgtagtcccagctactcgggaggccaaggcaggaggatcacttgagactgggaggtcacggctacagtgagccgtgatctcgcaactgcactccagcctgggcaacagagggagaGAaag------------------------------------------------------------------------------------------------------------gaaggaaggaaggaaggagggaaggagagaaggagggaagggagggagggaaaggaagTCAGTCTTGTGGGACAAGGAAGGAAGGAAGGAAGTCAGTCAGTcagtcttgtgggactcagccctgaacctttgggatctgatgctgtccccaggtagggagtgtcagaactaaatcaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacatacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGgactgggcatggtggctcatgcctgtcattccaggattttgggaggccaaggcaggcggatcacttgaggtcaggactttgagaccaccctggtgaacatggcaaaatcccatctctact--aaaaaaatacaaaaattagctgggcgcggtggcaggtgcctgtaataccagctactcgggaggctgaggcaggggaatcacttgaacccgggaggcggaggttgcagtgagctgagattgtgcctttgcactccagcctgggagacagagcaagactctccctcaaaa--aaaaaaaaaggccgggcgcagtggctcacgcctataatatcagcactttgggaggccgaggcaggT i panTro4.chr19 C 0 C 0 s macFas5.chr19 55752635 1014 + 59248254 gaggttgcagtgaactgtgatcATCAACAC---------------------------------------------AATTGCAAAAA------------------------TTGCAATACAAAAATGCACTCCAGCCTAGATGACAGGACTGCACTccaggctggatgacagagcaagactgtgtctcaa-------taaataaataaataaatagccaactgtgatggtacatgcctctagtaccagctactcaggaggccaaggcaggaggatcatttgagactgggaggtaaaggctgcagtgagccgtgatctcgtaactgcactccagcctgggcaacagagggagaGgaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagaagagaagagaaggagaaagagagagagagagagagaGAGggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--aaggaaggaag------gaaggaaggaaggaaggaagga----ag---ggcagtcttgtgggactcagccctgaacctgtgggatctgatgctgtccccaggtagagagtgtcagaaccgaaccaaaggagaggacacccagctggtctctgctggagaactggttgttggtggggagaaacaaacatttttggtgaagtattctgtgttgagtgtgaaagtaggaaaaacaGggccgggcgccgtggcgcatgcctgtcatcccaggattatgggaagccagggcaggcagatcacttgaggtcaggactttgagactaccctggtgaacatggcgaaatcccatctctaat-taaaaaaatacaaaaattagctgggcgcagtggagcgcacctgtaataccagctactccggaggatgaggcaggagaatcacttgaatctgggaggcggaggttacagtgagccgagattgtgccactgctctccagcctgggagatagagcaagactccatctcaaaaacaaacaaaCAggccaggcgctgtggctcaagcctgtaatcccagcactttgggaggccgagacgggc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56792754 1814 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3645.000000 s hg38.chr19_GL949753v2_alt 668924 7 + 796479 ggatcac s panTro4.chr19 59873947 7 + 63644993 ggatcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794568 7 + 60714840 ggattac i ponAbe2.chr19 I 1814 C 0 s macFas5.chr19 55753649 7 + 59248254 ggatcac i macFas5.chr19 C 0 I 584 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=610591.000000 s hg38.chr19_GL949753v2_alt 668931 2366 + 796479 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCatttatgtatgtatgtatttatttatttatttatttattttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccacctcccgggttcaagtaatcctcctgtctcagcct----cccaagtagctgggattacagggcacaccaccacacctggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcccgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacagaccgtgagccactgGGACG---GACACCCCTACTCCTTTCttcttcttc-------ttctttttttttttttttttgagatggagtctccctttgaagcccaggctggagtacaatggtgcgat-----cttagctcactgcagtttcctcctcccgggttcaagtgattctcctgcctcagcctccggagtagctgggattacaggcacacaccaccacaccagctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccttggcctcccaaactgctgggatcacaggcgtgagccactgcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactcctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccgagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGGCACTTGCTATCTCCAGGATTATGGGTCTCAGGTGAAagaaagacaaagaaggagagagagac--agagagggacagggaaagagaaTTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcagtggctcacgcctctaatcccagcactttgggacgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacgagccacagacaaaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtca----tgattgagcaatctaggggatacataacaggggtttcgtgcactgctggtcagagagaa--agaatagggcagggagtttcacagtgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggcgccgggctacctgcctttggtttcacttccttgtttttttct s panTro4.chr19 59873954 2364 + 63644993 tgacacccaacaccacgccttctaattttttgcatttttagtagaaacggggtttcaccatgttggccaggcttgtctccaactcctgtcctctggtgatccacctgccttggcctcccaaagtgctggaattacaggcgtgaaccCAGCAACTTTTCCCCCTTTTATCATACCTTAATTTGCCTCCACCACCCCCAGAAGCTCCAAGTCTCTACGCCTTTTCATTTATGTATGTATG----------------TATGTAttttattttgagacagggtctccctctatctcccaggctgcagtgcagtggcgtgatcttggcccactgcaacctccgcctcccgggttcaagtaatcctcttgtctcagcct----cccaagtagctgggattacagggcacaccaccacacccggctaatttttgtatttttagtggagactgggtttcaccctgttgtccaggctagtctcaaactcctgacgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccaccgGGACG---GACATCCCTACTCCtttcttcttcttc-------------ttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgat-----ctcagctgactgcaacctccgcctcctgggttccagtgatcctcctgcctcagcctccagagtagctgggattacaggaacacaccaccacaccggctaatttttgtatttttagcagagatggggtttcatcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacgttggcctcccaaagtgctgggatcacaggcgtgagccacctcacccTACACTCTTAtactcctttctgtagctcaggcagctagatgagcttcaatcatctggcccttcctccagtctcacatttttgtgggactgctgtgcatacataattgaatctggtttttcttctgtcaaactgttttgtgtcaatgtaattcatagcccatccaaagaacctaggagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaagagttcaagactggcccggtgtacaaagtgagacccagtctctatttaaaaaaGATGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtccaagactagcctggccaaggtggtgagaccgtgtctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgGTTTGGGATTTTCTCCCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacaaagaaggagagagagacagagagagggacagggaaagagaATTTCAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGGCTAGGTAAAAATGAACATGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgcggtggctcacgcctctaatcccagcactttgggatgccgaggtgggcgaatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagttagctagctgggcatagtggtgcatacctgtaatcccagctactctggaggctgaggcaggagaatcgcttgaacccgagaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctcaaataataataataataataataataataataataataaCTAGTggccaggcacagtggctcacgcctgtaatcccagtgtagcaggacaagccacagac-aaaacctctcagacaccgagttgtagaaggaagggc-tttattcagctgggagcatcggcaagctactgtcttaaaatccaagctcctcgagtgcacagtttctgtcccttttaagggctcacaacactaaagactgcgcatgaaagggtcg----tgattgaacaatctaggggatacgtaacaggggtttcgtgcactgctggtcagagagaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctatggataacatcgggttctaagtcatgagttgatttttatctactaggtttacgccaggcaggcccaggcctggtttcgggtctggttttgggtctggtgcctggtgcccggctacctgcctttggtttcacttccttgtttttttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56794575 2374 + 60714840 tgacacctaccaccacgcctgctaattttttgtatttttagtataaagggggtttcaccatgttggccaggcttgtctcgaactcctgtcctctggtgatccacctgcctcggcctcccaaagtgctggaattacaggcatgaaccCAGCAACTTttcccccttttatcataccttaatttgcctccaccacccccagaagctccaagtctctactccttttcatgtatgtatgtatg----tatgtatgtatgtatttattttattttgagacagggtctccctctatcttccaggctggagtgcagtggcgtgatcttggcccactgcaacctccacctcccaggttcaagtaatcctcctgtctcagcctcccgcccgagtagctgggattacagggcacaccaccacgcctggctaatttttgtatttttagtggagaccgggtttcaccctattgtccaggctagtctcaaactcctgatgtcaggtgatccacccatttcggttcccaaagtgttgagattacaga-cgtgagccatcgggacggacgacacccctacttctttcttcttcttctttttttttttttttttttttttttttgagatggagtctccctttgtagcccaggctggagtacaatggtgcgatctcagctcagctcactgcagtttcctcctcccgggttcaagtgattttcctgcctcagcctccagagtagctgggattacaggcacgtaccaccacactggctaatttttgtatttttagcagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcagaagatccacccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgcaccctacacttt--tactgctttctgtagctcaggcagctaaacgagcttcaatcatctggcccttcctccagtcccacatttttgtgggattcctgtgcatacacaattgaatctggtttttcttctgtcagactgttttgtgtcaatgtaattcacaacccatccaaagaacctaagagggtggagggaatccattttctctcctccacaCTggagggccatggagcccaggagttcaagaccggcccagtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGGGagccgggcacagtgtctcacgcctgtaattccagcactttgggaggcccaggtgggtggctcacctgaggtcaggagtccaagaacagcctggccaaggtggtgaaaccccatctttactaaaaatacaaaattagcttggtatggtggcaggagcctgtaatcccagctacttggaaggctagggcagcagaatcacttgGTTTGGGATTTTCTCTCTGAGACACTTGCTATCTCCAGGATTATGGGTCTCAGGTgaaagaaagacacagaaggagagagagacagagagagggacaggaaaagagaATTTTAGACTTATCTAACATTGACACTTAGGAGAAGTAGGGAGAAAGAGGTGGGAAAATAAAGTGCCAAGGTAAAAATGAACACGTCAGTAACAATAATAGCATTAACAATAACTAGTATTgccgggtgtggtggctcacgcctctaatcccagcactttgggatgccaaggcgggcgaatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaagttagctagctgggcacagtggtgcacgcctgtaatcccagctactagggaggctgaggcaggaggatcgcttgaacccgggaggcaaaggttgcagtgagtcaagatcaggccactgcactccagcccaagggacagagtgagactctgtctca------------------aataataataataataataaCCAGTggccaggtgcagtggctcacacctgtaaccccagtgtagcaggacgagccacagac-aaaacctctcagacacagagttgtagaagaaagggcttttattcagctgggagcatcggcaagctactgtcttaaaatccaagttcctcgagtgcacaatttctgtcccttttaagggctcacaacactaaagattgtgcacgaaagggtcgtgattgattgagccatctaggggatacgtaacaggggtttcatgcactggtggtcagagtgaaacagaacagggcagggagtttcacaatgttcttctatacaatgcctggaatctgtggataacatcgggttctaagtcatgagttgatttttatctactaggttgacgccaggcaggcccaggc------------ctggttttgggtctggtgcctggcgccgggctgcctgcctttggtttcacttgcttgcttttttct i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=26207.000000 s hg38.chr19_GL949753v2_alt 671297 298 + 796479 ttttc--------------------------------tttttttttttttttgagacagagtcttgctctgtcgctaaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatccttccgagtagctgggattacaggcgcacgccaccatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccgg s panTro4.chr19 59876318 330 + 63644993 ttttctttttctttttttttttctttttctttttctttttttttttctttttgagacagagtcttgctctgtcgcttaggctggagtacagtggcgcaatctcggctcactgcaagctccgcctcctggattcaagcaattctgctgcctcatcctcccgagtagctgggattacaggcgcacgccactatgcccggctaatttttgtatttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttgtgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccgg i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103312726 246 - 106955855 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=3791.000000 s hg38.chr19_GL949753v2_alt 671595 17 + 796479 cctccttgttttttttc s panTro4.chr19 59876648 17 + 63644993 cctccttgtttttttct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103312972 17 - 106955855 cttccttgcttttttct i nomLeu3.chr10 I 246 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56796949 0 + 60714840 C e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=32374.000000 s hg38.chr19_GL949753v2_alt 671612 62 + 796479 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca s panTro4.chr19 59876665 62 + 63644993 taaaacaagtactgagtataaaacaatataaaacaatatgagacggtttctctcttccctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56796949 62 + 60714840 taaaacaggtactgagtataaaacaatatagaacaatatgagagggtttctctcttccctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103312989 62 - 106955855 taaaacaggtactgagtataaaacagtataaaacaatatgagagggtttctctctttcctca i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I e papAnu2.chr19 47853881 5245 + 51301725 I e macFas5.chr19 55753656 584 + 59248254 I e rheMac3.chr19 60612254 1441 + 64156825 I a score=72867.000000 s hg38.chr19_GL949753v2_alt 671674 58 + 796479 ccagcactttgggaggctgaggcaggtggatcacaaggtcagAGTGGAT--------------agcacttta s panTro4.chr19 59876727 58 + 63644993 ccagcactttgggaggctgaggcaggtggatcacgaggtcagAGTGGAT--------------agcactttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797011 72 + 60714840 ccagcacttcgagaggctgaggcgggtggatcacgaggtcagAGTGGATCATGAGGTCAGATcagcactttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313051 55 - 106955855 ccagcacttcaggaggctgaggagggtggatcacaaggtca---tgaTc--------------agcactttg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613695 54 + 64156825 ccagcactttgggaggctgaggcaggcagattatgaggtca----gATc--------------agcacttcc i rheMac3.chr19 I 1441 C 0 s macFas5.chr19 55754240 53 + 59248254 ccagcactttgggaggctgaggcaggcagattacg-ggtca----gATc--------------agcacttcc i macFas5.chr19 I 584 C 0 s papAnu2.chr19 47859126 54 + 51301725 ccagcactttgggaggctgaggcaggcagattacgaggtca----gatC--------------AGCACTTcc i papAnu2.chr19 I 5245 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47566336 1756 + 50890351 I a score=327855.000000 s hg38.chr19_GL949753v2_alt 671732 134 + 796479 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaattttagtgtatgtgctgccaaagcaaatacTCTGAGACCCTGTTTCTACAAAAAA s panTro4.chr19 59876785 134 + 63644993 ggaggttgaggtgggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagacccccatttccaaTTTTAGTGTATGTGCTGCCAAAGCAAGTACTCTGAGACCCTGTTTCTACaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797083 128 + 60714840 ggaggttgaggtgggaggaccccttgagcccaggaactcaagtccagcctgggcaacatagcaagaccccCATTTCCAATTTTA------GTGCTGCCAAAGCAAGTACTGTGAGACCCTGTTTCTACAAAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313106 134 - 106955855 ggaggttgaggtaggaggatcccttgagcccaggagctcaagtccagcctgggcaacatagcaagaccccCATttccgattttagtgtacgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60613749 134 + 64156825 ggaggttgaagtgggaggatccagtcagcccaggagctcgagtacaacctgggcaacatagcaagaccccCATttccgattttagtatatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55754293 134 + 59248254 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859180 134 + 51301725 ggaggttgaagtgggaggatcccttgagcccaggagctcaagtccaacctgggcaacatagcaagacccccatttccgattttagtatatgtgctgccaaagcaagtactgtgagaccctgtttctacaaaaaa i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568092 134 + 50890351 ggaggttgaagtgggaggatcccttgagcctaggagctcaagtccaacctgggcaacatagcaagaccccCATttccgattttagtgtatgtgctgccaaagcaagtacTGTGAGACCCTGTTTCTACAAAAAA i chlSab2.chr6 I 1756 I 1 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=21675.000000 s hg38.chr19_GL949753v2_alt 671866 82 + 796479 TAAAAAAATTAAAATTAGT-GCTTGG----AAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT s panTro4.chr19 59876919 82 + 63644993 taaaaaaattaaaa-taGT-GCTTGG---AAAAAAAAAATTAGTGCTTGACCAGGAGGCAAGCACACCTCCTCATCCTCTCATGGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797211 86 + 60714840 TGAAAAAATAAAAATGAGT-GCTTGGAAAAAAAAAAAAAAAAGTGCTTGGCCAGGAGGCAAGCACACCTCCTCATCCTCTCACGGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313240 84 - 106955855 TAAAAAAATAAAAATTAGT-GCCTGG--AAAAAAAAAAATTAGTGCTTGACCAGGAGGCAGGCACACCTCCTCATCCTCTCATGGAT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55754428 19 + 59248254 aaaaaaaaTAAAAATTAGT-------------------------------------------------------------------- i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47859315 19 + 51301725 ttaaaaaataaaaattagt-------------------------------------------------------------------- i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47568227 20 + 50890351 GTAAAAAATAAAAATTAGTG------------------------------------------------------------------- i chlSab2.chr6 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e rheMac3.chr19 60613883 10 + 64156825 I a score=118359.000000 s hg38.chr19_GL949753v2_alt 671948 49 + 796479 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT s panTro4.chr19 59877001 49 + 63644993 GTCTGTCTGTAGAAAGTAAATGGAGACAGCTTCATTTTACCCAACTGCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56797297 49 + 60714840 GTCTGTCTGTAGAAACTAAACGGAGACAACTTCATTTTACCCAACTGCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103313324 49 - 106955855 GTCTGTCTGTAGAAACTAAATGGAGACAGCTTCATTTTACCCAACTGCT i nomLeu3.chr10 C 0 I 321 s rheMac3.chr19 60613893 49 + 64156825 GTCTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55754447 47 + 59248254 --CTGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47859334 47 + 51301725 --ctgtCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47568247 46 + 50890351 ---TGTCTGTAGAAAATAAATGGAGACAGCTTCATTTTACCCAACTGCT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=1641847.000000 s hg38.chr19_GL949753v2_alt 671997 727 + 796479 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCGACTCCCGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTGTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTAACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGTTTTTTTTGtttgtttgtttctttcgttttgttttttgagatgttgtctccctctatcacccaggctggagtgcagtggcgagatctcagctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgggtagctgggattacaggtgcctgccgccacacccagctaacttttgtatttttagtagagacgggatttcaccatgttggccaggctagtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaagccaccgcgctcaaccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagttag s panTro4.chr19 59877050 742 + 63644993 CCGTTTTAGGTCCGCTCCTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGACTGACAAGGCTGACAAGGCTGACTCCTTGTCAGAAGCAGGCAGTGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCGATACTCTGTTCTGACCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGTTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTGTTTCTTGttttt--------tttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctgcagtgcagtggcaagatctcggctcactgcaacctctgcttcccgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcctgccgccacacccagctaacttttgtatttttagtagagaccggatttcaccatgttggccaggctggtctcgagctcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattacagccttaaaccactgcgctcaaccAGAAGTCTGTTTAAATCCATTCTTCTCCCCAgccacccaagatttatgtgaccttggggttgctacttaacattacagtctcaatttcctcaATAGAACAAaagttag i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56797346 723 + 60714840 GTGTTTTAGGTCCGCTCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGGGAGCCAACTCCCGGCTGCAGAA-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTTTTCTGGCCATGTAGTTCCTCTTTTAGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGGTTTTTCTTGGGTTT-TTGtttgtttgtttcttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcgagatctcggctcactgcaacct---cttcctgggttcaagcaattctcctccctcagcctcctgagtagctgggattacaggcgcccaccgccacacccagctaacttttgtatttttagtagagacgggatttcaccgtgttggccaggctggtctccagctcctgaactcaagtgatccacccatcttggcctcccaaagtgctgagattacaggcttaagccactgcgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCCAgccacccatgagttatgtgaccttggggttgctacttaacatttcagtctcaatttcctcaATACAACAAAAGTTAG i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103313694 721 - 106955855 cggccCTAGGTCCACTCTTGAGCTTCTGTTGTTCCCAGTCATGCAACCCTGGGAACCGACTCCTGGCTGCAGAG-----------------------CCTTGTCAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCCTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATGTACCCGAACCAAACTCACTAATTCCAACAGAAGTCTGGTTTTTCTTGTTTTT---GtttgtttgtttgttttgttttgttttttgagatgttgtctccctctatcgcccaggctggagtgcagtggcaagatctcgactcactgcaacctctgcttcccaggtgcaagtaattctcctccctcagcctcctgagtaggtgggattacaggcgcccactgccatgcccagctaacttttgtatttttagtagagatgggatttcaccatgtgggccaggctggtctcgagctcctgacctcaagtgatccacccacttcggcctcccaaagtgctgggattacagctgtaagccaccatgctcagccAGAAGTCTGTTTAAATCCGTCCTTCTCCCTAgccacccatgagttatgtgaccttgtggttgctacttaacatttcagtctcaatttcctcaatagaacaaaagc--- i nomLeu3.chr10 I 321 C 0 s rheMac3.chr19 60613942 701 + 64156825 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAAAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAGTTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAATTCTGG------------------------GGtttgttttgttttg--tgttgagaccttgtctccctctattgcccgggctggagtgcagtggcgagatctcggcttattgtggcctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i rheMac3.chr19 C 0 I 1276 s macFas5.chr19 55754494 701 + 59248254 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTTCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGCACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGCATTTTGTTGAATTGTTTTTAAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGACCACGTAGTTCCGCTTTTGGATCTCCAAAAGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGTCTGG------------------------GGtttgttttgttttg--ttttgagaccttgtctccctctattgcccaggctggagtgcagtggcgagatctcggcttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgctgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccatgagccaccacgctcagccAGAAGCCTGTTTAAATCCATCCTTCTCCCTAgccacccatgagttatgtgatcttggggttgctacttaccatttcagtctcaatttcctcaAtagaacataagttag i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47859381 701 + 51301725 GTGTTTTAGGTCTGCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTTAGAAGCAGGCAATGTACACAGAGACCCAAGGCCTGATTTAGACAGGCTTTCACAGACCTGGGcattttgttgaattgtttttGAATTGTGGTTTCTTATCATTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACGCCTTTGCAGGCTCCATCTACCCGAACCAAACTCATTTATTCCAACAGAAGtctgg------------------------ggtttgttttgttttg--ttttgagaccttgtctccctctatcgcccaggctggagtgcagtggcaagatctcggcttaTTGtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttactacagacgggatttcaccatgttgaccaggctggtctcgagctcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattacagccgtgagccactatgctcagccagAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTCCTCAATAGAACATAAGCTAG i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47568293 701 + 50890351 GCGTTTTAGGTCTTCCCTTGAGCTTCTGTTGTTCCCAGCCATGCAACCCTGAGAGCCGACTCCTGGCTGCAGAG-----------------------CCTTGTAAGAAGCGGGCAATGTACACAGAGACCCAAGGCCTGGTTTAGACAGGCTTTCACAGACCGGGGCATTTTGTTGAATTGTTTTTGAATTGTGGTTTCTTATCAGTTCATCCAATACTCTGTTCTGGCCACGTAGTTCCTCTTTTGGATCTCCAAACCCCTTTGCAGGCTCCATCTACCCGAACCAAACTCACTTATTCCAACAGAAGTCTGG------------------------Gttttgttttgttttg--ttttgagaccttgtctccctctgttgcccaggctggagtgcagtggcgagatctcggtttattgtgacctccccttcctgggttcaagcaattctcctccctcagcctcctgaatagctgggattacaggcacctgccgccacacccagctaacttttgtatttttagtacagacgggatttcaccatgttgaccaggctgatcttgagctcctgacctcaagtgatccacccacctcggccccccaaagtgctgggattatagccgtgagccaccacgctcagccAGAAGTCTGTTTAAATCCATCCTTCTCCCTAGCCACCCATGAGTTATGTGATCTTGGGGTTGCTACTTACCATTTCAGTCTCAATTTcctcaatagaacataagttag i chlSab2.chr6 C 0 I 8 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I a score=2360.000000 s hg38.chr19_GL949753v2_alt 672724 7 + 796479 aagaatt-- s panTro4.chr19 59877793 5 + 63644993 aagaa---- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56798070 5 + 60714840 AAGAA---- i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103314415 5 - 106955855 aagaa---- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55755196 7 + 59248254 aagaa--tt i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47860083 5 + 51301725 AAGAA---- i papAnu2.chr19 I 1 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=11813.000000 s hg38.chr19_GL949753v2_alt 672731 17 + 796479 gtaACAAAAGATAGttt s panTro4.chr19 59877798 15 + 63644993 -taacaaaagatag-tt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798075 16 + 60714840 -TAACAAAAGATAATTT i ponAbe2.chr19 C 0 I 36 s nomLeu3.chr10 103314420 16 - 106955855 -taACAAAAGATAATTT i nomLeu3.chr10 C 0 M 2680 s papAnu2.chr19 47860088 16 + 51301725 -taacaaaagataattt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=273.000000 s hg38.chr19_GL949753v2_alt 672748 1 + 796479 t s panTro4.chr19 59877813 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47860104 1 + 51301725 t i papAnu2.chr19 C 0 I 295 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=-247.000000 s hg38.chr19_GL949753v2_alt 672749 7 + 796479 attttta s panTro4.chr19 59877814 3 + 63644993 att---- i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798091 36 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=66820.000000 s hg38.chr19_GL949753v2_alt 672756 297 + 796479 tttttatttttattttttgagatggagtcttgctctgtcacctaggctggagtgcagtggtgtgatggtggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcttgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag s panTro4.chr19 59877817 297 + 63644993 tttttatttttattttttgagatggagtcttgctctgtcacccagactggagtgcagtggtgtgatcttggctcactgcaagctccgcctcccggattcacgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccgtgcccagctaatttttttaatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctc--gtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56798127 298 + 60714840 tttttttcttttttttttaagacagagtctggctctgttgcccaggctggagtgcaatggcgcaatcttggctcaccacaacctccgcctcctgggttggagcaatcctcctgtctcagccttccgagtagctgggattacaggtgtgcaacaccacacccggctaatttttgt-atttttagtagagatggggtttcaccattttggccaggctggtcttgaactcctgacctcaggtgacccacctacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcccag i ponAbe2.chr19 I 36 I 902 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=100.000000 s hg38.chr19_GL949753v2_alt 673053 1 + 796479 c s panTro4.chr19 59878114 1 + 63644993 c i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e chlSab2.chr6 47568994 8 + 50890351 I e papAnu2.chr19 47860105 295 + 51301725 I e macFas5.chr19 55755203 0 + 59248254 C e rheMac3.chr19 60614643 1276 + 64156825 I a score=87397.000000 s hg38.chr19_GL949753v2_alt 673054 174 + 796479 ACaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattccaaggtcaaagaagaaataacaaagggcatttttaaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata s panTro4.chr19 59878115 174 + 63644993 acaaaagataatttcttaatcccatgcatttgagtcttaaaaaaatattctatataattctaaggtcaaagaagaaataacaaagggcattttttaaaatgctagaactgagtggtggtgaaattgctgttgaaatgtgtttgttgcactgatggaaatttataaatgtaaata i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755203 173 + 59248254 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaaa-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatagctgttgaaatgtgtgtgttgcactgatagaaacttataaatgtaaata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569002 173 + 50890351 acaaaagataatttcttagtcccatgtgtttgagtcttaaaaaga-attctatataattcataggtcaaagaagaaataacaaagggtattttttaaaatgttagaactgagtggtggtgaaatggctgttgaaatgtgtgtgttgcactgatggaaacttataaatgtaaata i chlSab2.chr6 I 8 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47860105 295 + 51301725 I e rheMac3.chr19 60614643 1276 + 64156825 I a score=51963.000000 s hg38.chr19_GL949753v2_alt 673228 78 + 796479 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactttgggaggccaaggcg s panTro4.chr19 59878289 78 + 63644993 tttatatt-aaaatataaaaTAATGggccaggcatagtggctcacacctgtaatctcagtactctgggaggccaaggcg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55755376 77 + 59248254 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860400 78 + 51301725 tctattttaaaaagaggggg-agggggccgggcacggtgtctcacgcctataattccatcactttgggacgcccaggtg i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47569175 77 + 50890351 tttatatt-aaaatataaaa-aaTGggccaggcatagtggttcacacctgtaatctcagtactttgggaggtcaaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56798425 902 + 60714840 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=757385.000000 s hg38.chr19_GL949753v2_alt 673306 717 + 796479 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaaGAGGGGGAGTGggccaggcacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctataatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagacttcatctctaaataaataaataaataaataaaagaaaaTACAAATTTTTT-AAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccagcatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaca-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA s panTro4.chr19 59878367 709 + 63644993 ggagggccat-ggagcccaggagttcaagaccggcccggtgtacaaagtgagacccagtctctagttaaaaaagaGGGGGAGAGggccggacacagtgtctcacgcctgtaattccagcactttgggaggccaaagcaggtggatcacccgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtgtg---------cactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatccca------------gctagggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcgtgccactgcactccagcctgggcaacaacagagagacttcatctc--------taaataaataaataaaggaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctcagatcaggagttcaagaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctgaggcaagagaattgcttgagccccggaggcagaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaaga-aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGTCCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56799327 719 + 60714840 ggagggccat-gaagcccaggagttcaagacccgcccagtgtacaaagtgagacccagtctctaGTTAACAAAGAGGGGGAGGGggccgggcacggtgtctcacacctgtaattccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtccaaga-------------------------------ccagcccg-gccaaggtggtgaaaccccgtctc---------tactaaaaa----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccagctacttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacaacagagagatttcatctc--------aaaataaataaataaaagaaaatacaaaTTTTTT-TAAAAAGGTACTGTggctgggcgtggtggttcacacctgtaatcccagcacttcgggaagccgaggcaggtggatctcagatcaggagttcaggaagagcctggccaacatggtgaaaacctatctgtactaaaaattagcctggcatggtggcaggtgcctgt--------------aggaggctga-gcaagagacttgcttgagacctggaagcggaggttgcagtgagccgagaccacaccactgcactccagcctgggcaacagagcgagagtctgtctcaaaaaggaaac--aaaaaaaaaGTACCTCCAAATTATGGTAGGGTGCCCATA i ponAbe2.chr19 I 902 C 0 s macFas5.chr19 55755453 737 + 59248254 ggagggccat-ggagcccaggagttcaagaccagcccggtgtacaaagggagacccagtctctatttaaaaaaGAGGGGGAGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtagatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggaacctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagcgagactctgtctc--------aaaataaataaataaaagaaaaTACATTTTTTTTTAAAAAAGGCACTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagacgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcgcctgtaatcccagctacccaggaggctgaggcaggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcgcgccactgcactccagcctgggcaacagagctagactctgtctcaaaaaggaaacaaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47860478 713 + 51301725 ggtggatcatctgaggtcaggagtccgagaccagcctggccaaggtggtgaaaccctgtctctactaaaaataca----aaattagcttggtatggtggcaggagcctgtaatcccagctgcttggaaggctagggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgtgcaacaacagtgagacgctgtctcaaaataaataaataaaagaaaatacaaattttttttaaaaaggcactgTGACgtaaa----------------------------------------------aacccaggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgac-acagcgagactccgtctc--------aaaaaaaaaaaaaaaaa------------------aaaaaaggcactgtgactgggcatggtggttcacacctgtaatcctagcactttgagaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccatctctactaaaaattagcctggcatggtggcaggtgcctgtaatcccagctacccaggaggctgaggcaggagaattacttgaacctgggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagcgagactctgtctcaaaaagg------aaaaaaaaggtacCTCCAAATTATGGTAGGGTGTCCATa i papAnu2.chr19 C 0 M 526 s chlSab2.chr6 47569252 733 + 50890351 ggagggccat-ggagcccaggagttcaagaccagcctggtgtacaaacggagacccagtctctatttaaaaaaGAGGGGGCGGGggccgggcacggtgtctcacgcctgtaattccatcactttgggacgcccaggtgggtggatcatctgaggtcaggagtccgaga-------------------------------ccagcctg-gccaaggtggtgaaacactgtctc---------tactaaaag----tacaaaattagctt-----ggtatggtggcgggagcctgtaatcccacctgcttggaaggctagggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctatgcaacaacagtgagactctgtctc--------aaaataaataaataaaagaaaatacaaaaTTTTTTTTAAAAGGCATTGTgactgggcatggtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatctgagatcaggagttcaagaagagcctggccaacatggtgaaataccgtctctgctaaaaattagcctggcatggtggcaggcacctgtaatcccagctacccaggaggctgaggccggagaattgcttgaacccaggaggcagagattgcagtgagccgagatcacgccactgcactccagcctgggcaacagagctagactctgtctcaaaaagg----aaaaaaaaaaGGTATCTCCAAATTATGGTAGGGTGTCCATA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=258713.000000 s hg38.chr19_GL949753v2_alt 674023 301 + 796479 TTAAGAAGGTAGAAAAAggtcgggggaagtgg---atgcctgtaatcccagaactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaaaagggtatggtgaaaccccatctctactagaactacaaaattagccgggcgtggtggtacatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcgccattgcactccagcctgggcgacaagagcaaaactccatctc s panTro4.chr19 59879076 304 + 63644993 TTAAGAAGGTAGAAAACGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctggccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccaggcgtggtggtacctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagtgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800046 304 + 60714840 TTAAGAAGATAGAAAAAAGTGGGGGGAAgtggctcgtgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaacagcctgaccaacagggtatggtgaaaccccgtctctactagaactacaaaattagccgggcatggtggtgcatgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaggaaaccggcaggcagaggttgcagcgagctgagatcgcaccattgcactccagcctgggcgacaagagcaaaactccgtctc i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756190 304 + 59248254 TTAAGAAGGTAGAAAAAGGTGGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcctggccaacacggtatggtgaaaccccgtctctaataaaaatacaaaatttgccggctgtggtggtgtctgcctgtaatcccagctacacaggagtctgaggcaggagaatcacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaagagcgaaactccatctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47569985 304 + 50890351 TTAAGAAGGTAGAAAAAGGTAGGGGGAAgtggctcatgcctgtaatcccagcactttgggaggctaaggcaggtggatcacctgaggtcaggagttcaagaacagcgtggccaatacggtatggtgaaaccctgtctctactaaaaatacaaaattagccggctgtggtgatgcctgcctgtaatcccagctacacaggagtctgaggcaggagaattacaagaacctggcaggcagaggttgcagtgagccgagatcacgccattgcactccagcctgggtgacaggagcgaaactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e calJac3.chr22 45914405 7610 + 49145316 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=8945.000000 s hg38.chr19_GL949753v2_alt 674324 7 + 796479 aaaaaaa s panTro4.chr19 59879380 7 + 63644993 aaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800350 7 + 60714840 aaaaaag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55756494 7 + 59248254 aaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570289 7 + 50890351 aaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922015 7 + 49145316 aaaaaaa i calJac3.chr22 I 7610 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60614643 1276 + 64156825 I a score=61855.000000 s hg38.chr19_GL949753v2_alt 674331 53 + 796479 -------------aaaaaaa----gaaaaaatgaaaaagaATTTATTGAAATGTGCAGTCTGAAAACTGC s panTro4.chr19 59879387 57 + 63644993 -------------aaaaaaaaaatgaaaaaatgaaaaAGAATTTATTGAAATGTGCAGTCTGAAAACTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56800357 52 + 60714840 -------------aaaaaa-----gaaaaaaagaaaaagaaTTTATTGAAATGTGCAGTCTGAAAACTGC i ponAbe2.chr19 C 0 M 882 s rheMac3.chr19 60615919 51 + 64156825 -------------AAAAAAA----AAAAAAAAGAAAAATAATTCACTGAAATGTG--GTCTGAAAACTGC i rheMac3.chr19 I 1276 C 0 s macFas5.chr19 55756501 44 + 59248254 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570296 44 + 50890351 ------------------------aaaaaaaagaaaaataaTTCACTGAAATGTG--GTCTGAAAACTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922022 66 + 49145316 agaagaagaaggagaagaag----aaaaagaacgaaaagaaTTTATTGAAATGTGCAGCCTAAAAACTGC i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=7255.000000 s hg38.chr19_GL949753v2_alt 674384 7 + 796479 TCCT-GCA s panTro4.chr19 59879444 7 + 63644993 TCCT-GCA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615970 8 + 64156825 TCCTGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756545 8 + 59248254 TCCTGGCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570340 8 + 50890351 TCCTGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922088 8 + 49145316 TCCTGGCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=44024.000000 s hg38.chr19_GL949753v2_alt 674391 54 + 796479 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Atttttttttttttttt s panTro4.chr19 59879451 57 + 63644993 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCAtttttttttttttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60615978 54 + 64156825 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTCA---Ctttttttttttttttt i rheMac3.chr19 C 0 I 8 s macFas5.chr19 55756553 54 + 59248254 CATTTtcattcatccttcctattccctccatccctca---ctttttttttttttttt i macFas5.chr19 C 0 I 5 s chlSab2.chr6 47570348 53 + 50890351 CATTTTCATTCATCCTTCCTATTCCCTCCATCCCTTC---Cttttttttttttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M a score=3135.000000 s hg38.chr19_GL949753v2_alt 674445 10 + 796479 gagacagagt s panTro4.chr19 59879508 10 + 63644993 tagacagagt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55756612 10 + 59248254 gagacagagt i macFas5.chr19 I 5 C 0 s chlSab2.chr6 47570401 8 + 50890351 gagac--agt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e nomLeu3.chr10 103314436 2680 - 106955855 M e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=41653.000000 s hg38.chr19_GL949753v2_alt 674455 49 + 796479 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac s panTro4.chr19 59879518 49 + 63644993 ttcgctcttgttgcccaggctggagtgcaatggcacgatctcagctcac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317190 49 - 106955855 Ttcgctcttgttgcccaggctggagtataatggcgtgatctcagctcac i nomLeu3.chr10 M 2680 C 0 s macFas5.chr19 55756622 49 + 59248254 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47570409 49 + 50890351 tttgctcttgttgtccaggctggaatgcaatggcgcaatctcagctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=107846.000000 s hg38.chr19_GL949753v2_alt 674504 229 + 796479 tgcaacctctgcctcccaggttccagccattttcctgcctcagcctccagaatagctggaattacaggcatctgccactacgcctggctaattttttgtgtatttttagtagagatgggatttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaatcaccacgcccggccCC s panTro4.chr19 59879567 229 + 63644993 tgcaacctctgcctcccaggttccagcgattttcctgcctcagcctccagaatagctggaattacaggtatctgccactacgcctggctaattttttgtgtatttttagtagagatggggtttcaccatgttggtcaggctgatctcgaact-cctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgaaccaccacgcccggccCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317239 214 - 106955855 tgcaacctctgcctcccaggttcaagcgattttcctgcctcagcctccagaatagctggaattacaggcacctgccactacgcctagctaattttttgtgtatttttagtagagatgg-------tcat--------ggctggtctccaact-cccgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggtatgaaccaccacacctggccCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55756671 230 + 59248254 ggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggcacctgccaccacgtccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacatgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggcccc i macFas5.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e rheMac3.chr19 60616032 8 + 64156825 I a score=273.000000 s hg38.chr19_GL949753v2_alt 674733 1 + 796479 T s panTro4.chr19 59879796 1 + 63644993 T i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317453 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45922096 0 + 49145316 C e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=13278.000000 s hg38.chr19_GL949753v2_alt 674734 40 + 796479 CATTTTCTTTTCTTtctttctttcttt-tttgtttgtttgt s panTro4.chr19 59879797 40 + 63644993 CACTTTCTTTTTATtctttctttcttt-tttgtttgtttgt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317454 39 - 106955855 CACTTTCTTTTT-TTCtttctttcttt-cttttttgtttgt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45922096 40 + 49145316 CATTTTCTTTCC-ttatttatttatttatttatttatttat i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C e rheMac3.chr19 60616032 8 + 64156825 I a score=16933.000000 s hg38.chr19_GL949753v2_alt 674774 30 + 796479 ttttgagacagagtcttgctc-tgtcaccca s panTro4.chr19 59879837 30 + 63644993 ttttgagacagagtcttgctc-tgtcaccca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317493 30 - 106955855 ttttgagacggagtctcgttc-tgtcgccca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616040 31 + 64156825 ttttgagacagagttttgctcttgttgtcca i rheMac3.chr19 I 8 C 0 s calJac3.chr22 45922136 28 + 49145316 ttttgagatggagtctccctc-tgtcaga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e papAnu2.chr19 47861191 526 + 51301725 M e macFas5.chr19 55756901 0 + 59248254 C a score=16576.000000 s hg38.chr19_GL949753v2_alt 674804 14 + 796479 ggctggagtgcagt s panTro4.chr19 59879867 14 + 63644993 ggctggagtgcagt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317523 14 - 106955855 ggctggagggcagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616071 14 + 64156825 ggctggaatgcaat i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861717 14 + 51301725 ggctggaatgcaat i papAnu2.chr19 M 526 C 0 s calJac3.chr22 45922164 14 + 49145316 ggctggagtgcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e chlSab2.chr6 47570458 0 + 50890351 C e macFas5.chr19 55756901 0 + 59248254 C a score=138265.000000 s hg38.chr19_GL949753v2_alt 674818 87 + 796479 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggc s panTro4.chr19 59879881 87 + 63644993 ggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctaggactacaggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103317537 87 - 106955855 ggtgacatctcggctcactgcaagctccacctcccgggttcatgccatcctcctgcctcagcctcctgagtagctgggactacaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616085 87 + 64156825 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861731 87 + 51301725 ggcgcaatctcagctcacggcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccagaatagctggaattacaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570458 87 + 50890351 ggcgcaatctcagctcacagcaacctctgcctcccaggttcaagcgattttcctgcttcagcctccagaatagctggaattacaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922178 87 + 49145316 ggcgagatctcggctcaccacaacctcctcctcctggattcaagcgattctcctgcctcagcctcccaagtagctgggattacaggc i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C a score=159098.000000 s hg38.chr19_GL949753v2_alt 674905 157 + 796479 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctccatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgaggcaccacactgggc------------------------------------cCCC s nomLeu3.chr10 103317624 156 - 106955855 gcccgccaccacgcccggctaa--ttttttgtatttttagtagagacggggtttcaccgtgtcagccaggatggtctcgatct-cctgacctc--gtgatccgcccgcctcggcctcccaaagtgctgggattccaggcgtgagccaccgcgccgggc------------------------------------cCC- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616172 161 + 64156825 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgccagacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggagtgaaccaccacacctggc------------------------------------cCC- i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47861818 161 + 51301725 acctgccaccacgcccagctaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaagctggtctcaaactgcccgacctcaggtgatccacctgcctaggcttcccaatgtgctgggattacaggcgtgaaccaccacacctggc------------------------------------ccc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570545 161 + 50890351 acctgccaccacgcccagtcaatgttttgtgtatttttagtacacacggggtttcaccatgttggtcaggctggtctcaaactgcccgacctcaggtgatccacctgcctcggcttcccaatgtgctgggattacaggcatgaaccaccacacctggc------------------------------------cCC- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922265 193 + 49145316 acacaccaccatgcccagctaat-ttttttgtatttttagtagagacagggtttcatcatgttggccaggatggtctcaatct-cttgacctt--gtgatccaccctcctcggcctcccaaagcgctgggattacaggcgtaaaccaccgcgcccggccTGGCAGATTTCATTCATCCTTTCTCTTCCCTCCATCCC- i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e macFas5.chr19 55756901 0 + 59248254 C e panTro4.chr19 59879968 0 + 63644993 C a score=1161886.000000 s hg38.chr19_GL949753v2_alt 675062 717 + 796479 TCACTTTCTTATTCTTTCTAGGATAGGCAACTGA-GCGCGGCAGTGAAGAGCTGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAgacctcagacaggttttctaaatatgccttgccttcattttctcaaggaaagtgaaaaatgggtaggatcatggcaatcactactgtgtagcaat-gtttagaggacttaataagtaaacacaGggtcaagcatggtggctcacaccggaaatcccagcactttggga-ggccgt---ggtgggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacctccatctctataaaa-aatacaaaaatctagtcaggcgtgatggcg-tatgcctgtagccttcagtaagctatgattgtgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATAGATGTACATATACATATGTTGGTTCTAAAACATGAAAAAggctgggcgcggtggttcgtgcctgcaacccaagcactttgggaggccgaggcgggcggatcacgaggtcaagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaatac------------------aaaaaAAAggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgagcagattacctgaggttgggag s nomLeu3.chr10 103317780 733 - 106955855 TCACTTTCTTATTCTTTTTAGGATAGGCAACTGAAGCACAGCAGTGAAGAGATGGGCTTCCGGAAGCTGACAGCTGTTTGTGATCTTCAAGACCTCCGGCAGGTTTTAAAAATATGCCTTGCCTTCATTTTTTCAAGGAAAGTGAAAAAAGGGTAGGATCATGTCAATCGCTACTGTTTGGCAACAGTTTGGAGGAAGTAATAAGTAAATACAGggtcaagcatggtggctctcagtggaaaccccagcactttgggagggccgt---ggtgggaaggatgcttaagcccaaggggtagagaccagaatgggcaacatagtgagagccccgtctctataaaa-aacacaaaaatatagtcaggcgtgatggcg-tatgcctgtagcagtcagtgagctatgattatgccactgcacaccagcctaggcgacagagtgagaccctgtctcaaaaagaa------aaaacgaaaagaaaTATACATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgtggtagctcatgcctgcaacccaagcacttcgggagtccgaggcggacggatcacgaggtctgaagtttgagaccaccctggccaacatagtgaaactccgtctctactaaaaatac-----aaaaaAAAAAAAAAAAAAAAAggctaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgagcggattacctgaggttgggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60616333 732 + 64156825 TCACTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcacggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaaATAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55756901 732 + 59248254 tcacttccttattcttcCTAGGATAGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATACCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAACACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGGAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggccgaggcgggcagatcactaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatac-------aaaaaAATAAAAATAAAAAggctaggcacagtagctcatgcctgtaatcctagcactttgggaggccgaggtgggtagattacctgaggttgggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47861979 735 + 51301725 tcacTTCCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGCAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGACCTCAGgcaggttttctaaatataccttGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAAGGTCATGGCAATCACTACTGTGTAGCAAA-GTTTAGAGGACCTAATAAGTAAATACAgggtcaagcatggtggctcacactggaaatcccagcacttcggaa-ggccat---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaAGACATGATGCCA-TATGCCTGTAgccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaa----aaaaaggaaagaaatatagatgtacatatacatataccagTTCTAAAACATggaaaaggctgggcgcggtggcttctGCCTGCAATCcaaacacttcgggaggctgaggcgggcagatcacgaggtcaggagtttgagaccagcctggccaacatagtgaaacctcgtctctactaaaaatacaaaaaaaaaaaaaaaaaaaaaaaaaaggctaggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcagattacctgaggttgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47570706 731 + 50890351 TCACTTTCTTATTCTTCCTAGGATTGGCAACTGA-GCGCAGTAGTGAAGAGCTGGGCTTCCAGAAGCTGACAGCTGTTCGTGATCTTCAAGATCTCAGGCAGGTTTTCTAAATATAGCTTGCCTTCATTTTCTCAAAGAATGTGAAAAATGGGTAGGGTCATGGCAATCACTACTGTGTAGCGAA-GTTTAGAGGACCTAATAAGTAAATACAGggtcaagcatggtggttcacgctggaaatcccagcacttcggga-ggccgt---ggtaggaagattgcttaagcccatggggttgagaccagcctgggcaacatagtgagacccccgtctctacaaaa-aatacaaaaatctagtaagacatgatgccg-tatgcctgtagccttcagtgagctatgattgtgccactgcacaccagcctaggtgac--agtgagaccctatctcaaaaagaaaaaaacaaaaaGGAAAGAAATATAGATGTACATATACATATATTGGTTCTAAAACATGAAAAAggccgggcgcggtggctcctgcctgcaatccaaacacttcgggaggctgaggcgggcggatcacgaggtcaggagtttgagaccagcccggccaacatagtgaaacctcgtctctacaaaaaatac--------aaaaaatAAAAATAAAAAggctaggcacagtggctcatgcctgtaatcctagcactttgggaagccgaggtgggcagattacctgaggttgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45922458 714 + 49145316 TCACTTTCTGACTCTTTCTAGAAT-----------------------AGAGCTGGGCTTCC-GAAGCTCACAGCTGTTTGTGATCTTCAAGACCTCAGACAGGTTTTCTAAATATTTCTTCCCTTCATTTTCTCAAGGAACGTGAAAAGTGGGTAGGATCCTGGCAATCCCTGCTGTGGAGGAAA-GCTTAGAGGACCCAGTAAGTCAATAGAGggtcaagcatggtggctcatggctgaaatcccagcactctggga-ggccatggcggcgggaagatcgcttaagcccatgaggttgagaccagcctgggcaacatcgtgagatcaccatctctacaaaacaatatccaaatctagtcaggcatgagggcattatgcctgtagcctgcagtgagctatgattgtgccactgcactccagccagggcgacagagtgagaccctgactcaaaaagaa-acaacaaaaagaAAAGAAATACAGATGTAGACAGACATATGTTGGTTCTAAAGCATGAAAAAggctgggcacggtggctcacgcctgtaatcccagcactctgggagtccaatgccggcacatcaagaggtcaggagtttgagaccagcttggccaacatagtgaaaccctatctctactaaaaatac--------aaaaaaaaacaaaaaactagccgggtgtgctggcgggcgtctgtagtcccagctacttgggaggtggaggcaggaaaatcacttgaacccaggag i calJac3.chr22 C 0 I 1621 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e panTro4.chr19 59879968 0 + 63644993 C a score=97417.000000 s hg38.chr19_GL949753v2_alt 675779 83 + 796479 ttcaagaccaccctgtcc-aacatggtgaaaccccatctctactaaaaata-agaaaattagccgggtacagtggcacgcgcctg s nomLeu3.chr10 103318513 84 - 106955855 ttcaagaccagcctggcc-aacacggtgaaaccccatctctactaaaaatacaaaaaattagccgggtacagtggcacgcacctg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617065 84 + 64156825 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i rheMac3.chr19 C 0 M 676 s macFas5.chr19 55757633 84 + 59248254 ttcaagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgcagtggcacacgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862714 84 + 51301725 ttcaaaaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagccgggtgccgtcacacgcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571437 84 + 50890351 ttccagaccaacctggccaaacatggtcaaaccccatctctactaaaaata-caaaaattagcccggtgcagtggcacgtgcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e panTro4.chr19 59879968 0 + 63644993 C a score=120684.000000 s hg38.chr19_GL949753v2_alt 675862 184 + 796479 taatcccagctattcaggaggctgaggcaggagaatcgcttgaactctggaggcggaggttgcagtgagccaagattgcgccactgcactccagcccgggcgacagtgccagactcagtctcagaaaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaaca-------aagaaACATGAAAAAAAGCTATAAAACCCAACttttt s nomLeu3.chr10 103318597 176 - 106955855 taatcccagctcttcaggaggctgaggcaggagaatcgcttgaactctggaggcagaggttgcagtgaactgagatcgcgccactgcactacagcccgggcgacagtgcaagaatcagtctc---aaaaaaaaaagc----------------------------------------------------------------------------------------aaaacaaac------------aacatgaaaaaaaGCTATAAAACCCAACTTTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757717 269 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctagaggaggaggttgcagtgagccgagatggtgccactgcactccagcccaggcgacagtg--agactctgtctccaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCaaaacaaaa--------aaaaaacatgaaaaaaagcaataaaaCTCAACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862798 189 + 51301725 taatcccagctactcaggaggctgaggcaggagaatcgcttaaactctggaggaggaggttgcagtgagccgagatggtgccactgcactccagccccggcgacagtg--agactcagtctcaaaaaaaaaaaaaaa----------------------------------------------------------------------------------------aaaaaaaaaagcaaaacaaaaaaaatgaaaaaaagctataaaactcAACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571521 178 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcgcttgaactctgaaggaggaggttgcagtgagctgagatggtgccactgcactccagcccgggcgacagtg--agactctgtctccaaaaaaacaaagc-----------------------------------------------------------------------------------------aaaacaa----------aaaaaaCATGAAAAAAAGCTATAAAATTCAACTTTTT i chlSab2.chr6 C 0 I 9 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=2670.000000 s hg38.chr19_GL949753v2_alt 676046 9 + 796479 tcttttttt s nomLeu3.chr10 103318773 9 - 106955855 AGTCTTATT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757986 9 + 59248254 AGTCTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47862987 9 + 51301725 AGTCTTATT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e chlSab2.chr6 47571699 9 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=91.000000 s hg38.chr19_GL949753v2_alt 676055 1 + 796479 t s papAnu2.chr19 47862996 1 + 51301725 T i papAnu2.chr19 C 0 I 300 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 676056 466 + 796479 tttgagacggagtctcactctgtcgcccagggtggagtgcagtggtgcggtctcggctcactgcaacctccgcctcctgggttcaagcaattctctgcttcagcctcccaagtagctgggattacaggcacccgccaccacgcccgactaattttttgtatttttagttgagacggggtttcatcatcttggccaggctggtcttgaagtcctgacctcgtgatccacccgccttggcctcccaaagtgctggaattacaggcgtgagccaccgcgcccggccAAAACCCAACTTTTTAGTCTTATTTATATGGTGtttttttttttttttttttttttgagatggagccttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggt e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M e panTro4.chr19 59879968 0 + 63644993 C a score=13576.000000 s hg38.chr19_GL949753v2_alt 676522 153 + 796479 gcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcccggc s panTro4.chr19 59879968 153 + 63644993 gcccaccaccatgccaggcaaattttttgtatttttagtagagacggggtttcaccgtgttagccaggattgtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e nomLeu3.chr10 103318782 0 - 106955855 C e chlSab2.chr6 47571699 9 + 50890351 I e papAnu2.chr19 47862997 300 + 51301725 I e macFas5.chr19 55757995 0 + 59248254 C e rheMac3.chr19 60617149 676 + 64156825 M a score=24200.000000 s hg38.chr19_GL949753v2_alt 676675 26 + 796479 TATATGTTTACAAAATTAATACTGCC s panTro4.chr19 59880121 26 + 63644993 TATATGTTTACAAAATTAATACTGCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318782 26 - 106955855 TATATGTTTACAAAATTAATACTGCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55757995 26 + 59248254 TATATGTTTACAAAATTAATACTGCC i macFas5.chr19 C 0 I 278 s chlSab2.chr6 47571708 26 + 50890351 TATATGTTTACAAAATTAATACTGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e papAnu2.chr19 47862997 300 + 51301725 I e rheMac3.chr19 60617149 676 + 64156825 M a score=2865.000000 s hg38.chr19_GL949753v2_alt 676701 2 + 796479 Ag s panTro4.chr19 59880147 2 + 63644993 Ag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318808 2 - 106955855 Ag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758299 2 + 59248254 ag i macFas5.chr19 I 278 C 0 s papAnu2.chr19 47863297 2 + 51301725 ag i papAnu2.chr19 I 300 C 0 s chlSab2.chr6 47571734 2 + 50890351 Ag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e calJac3.chr22 45923172 1621 + 49145316 I e rheMac3.chr19 60617149 676 + 64156825 M a score=45357.000000 s hg38.chr19_GL949753v2_alt 676703 33 + 796479 ccaggcacggtggctcacgcctgtaatcccagc s panTro4.chr19 59880149 33 + 63644993 ccaggcacggtggctcacgcctgtaatcccagc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103318810 33 - 106955855 ccaggcacggtggctcacgcctgtaatcccagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758301 32 + 59248254 ccgggtgtggtggggg-cgcctgtggtcccagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863299 32 + 51301725 ccgggcctggtggggc-cgcctgtagtcccagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47571736 33 + 50890351 ccaggcacggtgggtcacacctgtaatcccagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924793 33 + 49145316 ctgggcatggtggctcaagcctgtaatcccagc i calJac3.chr22 I 1621 C 0 e canFam3.chr1 102637494 0 + 122678785 I e ponAbe2.chr19 56800409 882 + 60714840 M e rheMac3.chr19 60617149 676 + 64156825 M a score=118763.000000 s hg38.chr19_GL949753v2_alt 676736 83 + 796479 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta s panTro4.chr19 59880182 83 + 63644993 actttaggagggtgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801291 83 + 60714840 actttaggaggctgaggctggcagatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i ponAbe2.chr19 M 882 C 0 s nomLeu3.chr10 103318843 83 - 106955855 actttaggaggctgaggctggcggatcacctgaggtcaggagtttgagac-------------------------------cagcctggccagcatggcaaaaccccgtct-----cta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758333 119 + 59248254 tactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaa i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47863331 114 + 51301725 tactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaa i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47571769 83 + 50890351 actttaagaggctgagactggtggatcacctgaggtcaggagtttgagat-------------------------------cagcctgggcagcatggcaaaactccgtct-----cta i chlSab2.chr6 C 0 I 306 s calJac3.chr22 45924826 81 + 49145316 actttgggaggccgaagtaggtggatca--tgaggtcaggagtttgagac-------------------------------cagcctgaccaagatggtgaaaccctgtct-----cta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=-2136.000000 s hg38.chr19_GL949753v2_alt 676819 4 + 796479 tt----ga s panTro4.chr19 59880265 4 + 63644993 ct----ga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801374 4 + 60714840 ct----ga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318926 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758455 4 + 59248254 ----aaaa i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47863448 4 + 51301725 ----aaaa i papAnu2.chr19 I 3 C 0 s calJac3.chr22 45924907 4 + 49145316 ct----ga i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e chlSab2.chr6 47571852 306 + 50890351 I e rheMac3.chr19 60617149 676 + 64156825 M a score=227109.000000 s hg38.chr19_GL949753v2_alt 676823 107 + 796479 aaaaaatacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccggcaggcggaggctgcggg s panTro4.chr19 59880269 107 + 63644993 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaagccggcaggcggaggctgcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801378 107 + 60714840 aaaaaatacaaaaattagccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcgcttgaacccggcaggcggaggctgcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103318934 107 - 106955855 aaaaaatgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccggcaggcggaggctgcggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55758459 107 + 59248254 aaaaaattgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccaggaggcggaggctgcaag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 107 + 51301725 aaaaaattcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 107 + 50890351 aaaaaattcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgggaggcggaggctgcaag i chlSab2.chr6 I 306 C 0 s calJac3.chr22 45924911 106 + 49145316 ---aaatacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaagaggcggagattgcagt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e rheMac3.chr19 60617149 676 + 64156825 M a score=159877.000000 s hg38.chr19_GL949753v2_alt 676930 62 + 796479 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataa s panTro4.chr19 59880376 62 + 63644993 gagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801485 62 + 60714840 gagccaagatcgtgccattgcactccagcctggggaac-agagcaagactcca--ctaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319041 62 - 106955855 gagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617825 62 + 64156825 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i rheMac3.chr19 M 676 C 0 s macFas5.chr19 55758566 62 + 59248254 gagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863559 62 + 51301725 gagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572265 62 + 50890351 cagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925017 65 + 49145316 gagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaatta i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I a score=-5763.000000 s hg38.chr19_GL949753v2_alt 676992 3 + 796479 aa----t s panTro4.chr19 59880438 2 + 63644993 aa----- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801547 7 + 60714840 aaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319103 7 - 106955855 aaaaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863621 1 + 51301725 ------t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572327 1 + 50890351 ------t i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925082 6 + 49145316 -attatt i calJac3.chr22 C 0 C 0 e canFam3.chr1 102637494 0 + 122678785 I e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=-4658.000000 s hg38.chr19_GL949753v2_alt 676995 5 + 796479 --aataa s panTro4.chr19 59880440 3 + 63644993 --aaT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801554 3 + 60714840 --aaT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319110 5 - 106955855 --aaaaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47863622 2 + 51301725 --aa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572328 2 + 50890351 --aa--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925088 2 + 49145316 --aa--- i calJac3.chr22 C 0 I 13 s canFam3.chr1 20035636 5 - 122678785 aaaat-- i canFam3.chr1 I 23589 C 0 e macFas5.chr19 55758628 0 + 59248254 C e rheMac3.chr19 60617887 0 + 64156825 C a score=979316.000000 s hg38.chr19_GL949753v2_alt 677000 313 + 796479 taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga s panTro4.chr19 59880443 313 + 63644993 TAATACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacaattatctgggactctcgaaagaactccagggtctgggcagccccagtgtaaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56801557 313 + 60714840 TAGTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctctcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgtTCGTGCTTTGAAATGAGGCTCCAGATAGGTAAGTTTAACAGGCAGCCAAGA i ponAbe2.chr19 C 0 I 1096 s nomLeu3.chr10 103319115 313 - 106955855 aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATA-GTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactctctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60617887 304 + 64156825 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758628 304 + 59248254 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 307 + 51301725 taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTCTTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 307 + 50890351 taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTA-GTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactctttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925103 306 + 49145316 taatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATA-GTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc----aagaactccagtatctgagcggcccgaatctgaccaatcaaccagaatctctgggtgtttgtactttaaaatgaggccccagataggtaagttt-acaggcagccaagg i calJac3.chr22 I 13 C 0 s canFam3.chr1 20035641 303 - 122678785 taatattgtcagtataaaactggtgaacttg--gctattgatgtatcttttgtatttacatgtcacttacatttaacatgaaatgttggtggacttttag---------atctggtatgaCAGAAGGGGGTGGCTATTCACAGCTGAACTTCCTGAGcagtgattctcaagattggctgcaattaaaatcatctggagatctttaaaaaacttcagtgactgggcagcccccatctgattaacaaatcagaatatctgggaaccgacactttcaaatgatgccccagggaggtgggttctacatgtggacaagg i canFam3.chr1 C 0 C 0 a score=99099.000000 s hg38.chr19_GL949753v2_alt 677313 57 + 796479 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGGACCG-CCCCCCAACACCC s panTro4.chr19 59880756 57 + 63644993 tggaggaccacAGGT---GGAGATCGGGAAGCTCA-GGTGAAGAACCG-CCCCCCAACACCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56802966 57 + 60714840 ttgagaaccacAGGT---GGAGATGGGGAAGCTCA-GGTGAGGAATCG-CCGCCCACCACCC i ponAbe2.chr19 I 1096 C 0 s nomLeu3.chr10 103319428 58 - 106955855 ctgagaaccacAGGT---GGAGATCGGGAAGGTCA-GGTGAGGAATCGCCCCCCCACCACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618191 47 + 64156825 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758932 47 + 59248254 ttgagaaccacAGGT---GCAGAACCGGAAGCTCA-GGTCAGGCATTG----------A-CC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863931 48 + 51301725 TTGGGAACCACAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------Accc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572637 47 + 50890351 ttgggaaccacAGGT---GCAGATCCGGAAGCTCA-GGTCAGGCATTG----------A-CC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925409 50 + 49145316 ttgagaaccacAGGT---GTAGATGGGGAAGCTCA-GGTGAGGAGTCA--------GCACCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035944 51 - 122678785 ttaagaacctctgGTCTAGGAGAAGGTGAGGCTCACACTAAGGAAATG----------GTC- i canFam3.chr1 C 0 C 0 a score=14825.000000 s hg38.chr19_GL949753v2_alt 677370 14 + 796479 CCCGCCCCCAAAAG s panTro4.chr19 59880813 14 + 63644993 CCCGCCCCCAAAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803023 14 + 60714840 CCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319486 14 - 106955855 CCCGTCCCCAAACG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618238 11 + 64156825 CCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758979 11 + 59248254 CCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863979 11 + 51301725 cccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572684 11 + 50890351 CCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20035995 3 - 122678785 ----TCC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22 45925459 0 + 49145316 C a score=635579.000000 s hg38.chr19_GL949753v2_alt 677384 227 + 796479 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAGAAAGAAGCC---TTAATAGA-GCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATttctcct--- s panTro4.chr19 59880827 227 + 63644993 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCAACCTGCAGCCCTCATCGCCGCCGGAGAGTAGGGCCAGTTGTTGA-GAGGTGAGTAGCTCTCCGGCAACTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAATttctcct--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803037 227 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGAAAGAGAAGCC---TTATTAGA-GCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGG-GTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------T--------GGTAAAATTTCTCCt--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 227 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGC-TGCGGCCGAACGAGAAGCC---TTATTAGA-GCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGG-GAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60618249 228 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------GGTAAAATGTCTCCT--- i rheMac3.chr19 C 0 T 590 s macFas5.chr19 55758990 228 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGGAGCCTTTTTATTAGC-GCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAC-GAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------T--------CGTAAAATGTCTCCt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 226 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------t--------ggtaaaatttcct----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 228 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGC-TGCGGCCGA--GAGAAGCCTTTTTATTAGA-ACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAG-GAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------T--------GGTAAAAtttctcct--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 239 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG---TGGGGCAGAAAGAGAAACCTTTTTATTAGC-GCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGG-GAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTAT--------GGTAAAAttcctcc---- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20035998 233 - 122678785 ACCTATCAGTAACCATGCTGGATGCAGGAAGTTCTTTGCAATGG----GTCCCAAGGGCCAATCACAGAGCTTGAGGCAGAACAAGAGACTCCTTTATCGGAGGCTTTTTACACCTGCAGCACTCA---CAACCAGAGAGGAGC-CCTGGTGCTGGAGAGGTAAGTAACATCCCTGCTTCTTT---ACTTCATTTCTCCATTTCCTTATTCAACTGT---------------TAAATCCGCAATAAAAATCTTCCTCCC i canFam3.chr1 C 0 C 0 a score=1530.000000 s hg38.chr19_GL949753v2_alt 677611 16 + 796479 tttatttcatata-ttt s panTro4.chr19 59881054 16 + 63644993 tttatttcatata-ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803264 17 + 60714840 tttatttcatatatttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319727 6 - 106955855 ttt-----------ttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 12 + 59248254 ----ctttttttt-ttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864216 5 + 51301725 -----------tt-ttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 14 + 50890351 --ttttttttttt-ttt i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20036231 15 - 122678785 -TTTCTTTGAATA-TTT i canFam3.chr1 C 0 I 5018 e calJac3.chr22 45925698 0 + 49145316 C e rheMac3.chr19 60618477 590 + 64156825 T a score=307678.000000 s hg38.chr19_GL949753v2_alt 677627 156 + 796479 ttttt---ctgagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctctgctcactgcaagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaa s panTro4.chr19 59881070 156 + 63644993 ttttt---ttgagacgaagtctcgctctgtcgcccaggctggagtgcggtggcccgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcccgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcccggctaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803281 156 + 60714840 ttttt---ttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccagctaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103319733 156 - 106955855 ttttt---ttgagacggaatctcgctctgtcgcccaggctggggtgcattggcgccatcttggctcactgtgagctc---cgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccaggcctggctaa i nomLeu3.chr10 C 0 I 13 s macFas5.chr19 55759230 157 + 59248254 ttttt-aattgagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864221 155 + 51301725 ttttt---ttgagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcccgccacttcgcccggctaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572937 158 + 50890351 tttttaaattgagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925698 150 + 49145316 ttttt---ttgagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagct-ggactataggcatgagccaccacacatggccaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T a score=2202.000000 s hg38.chr19_GL949753v2_alt 677783 4 + 796479 --tttt s ponAbe2.chr19 56803438 4 + 60714840 --tttt i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103319902 4 - 106955855 --tttt i nomLeu3.chr10 I 13 C 0 s macFas5.chr19 55759387 4 + 59248254 --tttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864376 4 + 51301725 --gttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573095 4 + 50890351 --tttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925848 4 + 49145316 CATT-- i calJac3.chr22 C 0 T 938 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=5993.000000 s hg38.chr19_GL949753v2_alt 677787 5 + 796479 ttgta s ponAbe2.chr19 56803442 5 + 60714840 ttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319906 5 - 106955855 ttgta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759391 5 + 59248254 ttgca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864380 5 + 51301725 ttgta i papAnu2.chr19 C 0 T 1070 s chlSab2.chr6 47573099 5 + 50890351 ttgca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=910.000000 s hg38.chr19_GL949753v2_alt 677792 1 + 796479 t s ponAbe2.chr19 56803447 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319911 1 - 106955855 t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759396 1 + 59248254 t i macFas5.chr19 C 0 T 1080 s chlSab2.chr6 47573104 1 + 50890351 t i chlSab2.chr6 C 0 T 947 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e papAnu2.chr19 47864385 1070 + 51301725 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=2211.000000 s hg38.chr19_GL949753v2_alt 677793 8 + 796479 ttttagta s ponAbe2.chr19 56803448 8 + 60714840 ttttagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319912 8 - 106955855 ttttagta i nomLeu3.chr10 C 0 T 980 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=100.000000 s hg38.chr19_GL949753v2_alt 677801 1 + 796479 g s ponAbe2.chr19 56803456 1 + 60714840 g i ponAbe2.chr19 C 0 T 893 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 677802 8 + 796479 gtggctca e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e papAnu2.chr19 47864385 1070 + 51301725 T e macFas5.chr19 55759397 1080 + 59248254 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=15805.000000 s hg38.chr19_GL949753v2_alt 677810 103 + 796479 cgcctgtaatcccagcactttaggaggctgaggctggcagatcacctgaggtcgggagtttgaga-------------------------------ccagcctggccagcatggcaaaaccccgtct--------ctattga s macFas5.chr19 55758317 142 + 59248254 cgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactccgtttaaaaaaaaaaaaaaa i macFas5.chr19 T 1080 C 0 s papAnu2.chr19 47863315 137 + 51301725 cgcctgtagtcccagctactggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagactctgttt-----aaaaaaaaaa i papAnu2.chr19 T 1070 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e chlSab2.chr6 47573105 947 + 50890351 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=3276.000000 s hg38.chr19_GL949753v2_alt 677913 6 + 796479 aaaaaa s macFas5.chr19 55758459 6 + 59248254 aaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863452 6 + 51301725 aaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572158 6 + 50890351 aaaaaa i chlSab2.chr6 T 947 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e calJac3.chr22 45925852 938 + 49145316 T e nomLeu3.chr10 103319920 980 - 106955855 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=91751.000000 s hg38.chr19_GL949753v2_alt 677919 84 + 796479 tacaaaaattaaccaggcgttgtggcgcatgcttgtaatctcagctactc--gggaggctgaggcaggggaatcacttgaagccgg s nomLeu3.chr10 103318940 84 - 106955855 tgcaaaaatcagccaggcgttgtggcgcatgcttgtaatcccaaatactc--aggaggctgaggcaggagaatcgcttgaacccgg i nomLeu3.chr10 T 980 C 0 s macFas5.chr19 55758465 84 + 59248254 ttgaaaaattagccaggcgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863458 84 + 51301725 ttcaaaaattagccaggcgttgcggcgcatgcctgcaatcccaggtactc--gggtggctgaggcaggagaatcgctcgaacccgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572164 84 + 50890351 ttcaaaaattagccaggtgttgcggcgcatgcctgtaatcccagctactc--gggtggctgaggcaggagaatcgctcgaacccgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45924914 86 + 49145316 tacaaaaattagcgaggtgtggtggcaggcgcctgtaatcccagatactcaggggaggctcaggcaggagaatcatttgaacccaa i calJac3.chr22 T 938 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803457 893 + 60714840 T e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=106635.000000 s hg38.chr19_GL949753v2_alt 678003 87 + 796479 caggcggaggctgcggggagccgagatcgtgccgttgcactccagcctggggaac-agagcaagactcca--ttaaaaataaaataataa s ponAbe2.chr19 56802564 87 + 60714840 Caggcggaggctgcggggagccaagatcgtgccattgcactccagcctgcgtaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i ponAbe2.chr19 T 893 I 2 s nomLeu3.chr10 103319024 87 - 106955855 caggcggaggctgcggggagccgagatcctgccattgcattccagcctgggcaac-agagcaagactcca--ctaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 I 4 s macFas5.chr19 55758549 79 + 59248254 gaggcggaggctgcaaggagccgagatcatgccattgcactccagcctgggcaac-taaacaagactcca--ttaaaaataa-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863542 82 + 51301725 gaggcggaggctgcaaggagccgagatcacgccattgcactccaacctgggcaac-taaacaagactcca--ttaaaaataataa----- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572248 82 + 50890351 gaggcggaggctgcaagcagccgagatcacgccattgcactccagcctggacaac-taaacaagactcca--ttaaaaataataa----- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925000 90 + 49145316 gaggcggagattgcagtgagctgaaattgtgccattgcagtccagcttgggcaacaagagtgaaactctgtctcaaaaattaattattaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 590 + 64156825 T e panTro4.chr19 59881226 0 + 63644993 C a score=431795.000000 s hg38.chr19_GL949753v2_alt 678090 200 + 796479 -------------taaTACTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGCGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcggccgcaatcacagttatctgggactc s ponAbe2.chr19 56802653 200 + 60714840 -------------TAGTATTGTGAATGTGAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATATTTCACTTGAAATACGGTTGGATTTTTATTAATAATATATCTGGGGTGATGGGAGAAGGTAGCCAATCACAGCTGAGGCTTCTAAGcggtgattctcagcctcagcggcaatcacaattatctggggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103319115 200 - 106955855 -------------aaaTACTGTGAGTGTAAAACTGATGAACTTGGTGCTTTTCATGTGTCTCATAGTTGACGTGTCATTGATACTTCACTTGAAGTACGGTTGGATTTTTATTAATAATATACCTGGGGTGATGGGAGAAGGTAACCAATCACAGCTGAGGTTTCTAAGcggtgattttcagcctcggcggcaatcacaattatctgggactc i nomLeu3.chr10 I 4 C 0 s rheMac3.chr19 60617887 191 + 64156825 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i rheMac3.chr19 T 590 C 0 s macFas5.chr19 55758628 191 + 59248254 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATAGTTCACTTGAAATGCGGTTGGATTTTTAT---TAATATACTTGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATcctca------gcggcaatcacaattatctgggactc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863624 194 + 51301725 -------------taatactgtgaGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACGTGTCATTGATATTTCACTTGAAATGCGGTtggatttttattaataatatacttGGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGCGGTGATTCTCA------GCGGCAATCACAATTATCTGGGACTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572330 194 + 50890351 -------------taaTACTGTGAGTGTAAAACCGATGAACTTGGTGCTTTTCATGTGTCTCGTAGTTGACATGTCATTGATATTTCACTTGAAATGCGGTTGGATTGTTATTAATAATATACTTAGGGTGGTGGGAGAAGGTAGCCAGTCACAGCTGAGGCTTCTAAGcagtgattctca------gcggcaatcacaattatctgtgactc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925090 211 + 49145316 ttaattaattaattaatACCGCCAGTGTAAAACTGATGAATTTGGTGCTTTTCATGTGTCCCATAGTTGACGTGTCATTGATACTTAACTGGAAATGCAGTTGGATTTTTATTAAGAATATGCCTCGTGTGGT-GGAGAAGGGAGCCAGTCGCAGCTGAGGCTTCTAAGcggtgattctcagacca-tcagcaatcgtaattatctgggactc i calJac3.chr22 C 0 I 158 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=250576.000000 s hg38.chr19_GL949753v2_alt 678290 166 + 796479 tcgaaagaactccagggtctgggcagtcccagtgtaaccaatcaagcagaatctctaggcgttcgtgctttgaaatgaggctccacataggtaagtttaacaggcagtcaagatggaggaccacAGGTGGAGATCCGGAAGCTCAGGTGAAGGACCGCCCCCCAAC s ponAbe2.chr19 56802853 166 + 60714840 tcgaaagaactccagggtctgggcagcgccagtctgaccaatcaagcagaatctctgggcgttcgtgctttgaaatgaggctccagataggtaagtttaacaggcagccaagattgagaaccacAGGTGGAGATGGGGAAGCTCAGGTGAGGAATCGCCGCCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319315 166 - 106955855 tctaaagaactccagggtctgggccgccccagtctgaccaatcaagcagaatctctgggcgtttgtgctttgaaatgaggctccagataggtaagtttaacaggcagctaagactgagaaccacAGGTGGAGATCGGGAAGGTCAGGTGAGGAATCGCCCCCCCAC i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60618078 158 + 64156825 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaatgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758819 158 + 59248254 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccagcatctctgggcgttcgtgctttgaaacgaggccccagatgggtaagtttaacaggcagcctagattgagaaccacAGGTGCAGAACCGGAAGCTCAGGTCAGGCATTGA-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863818 158 + 51301725 TTTAAAGAACTCCAGGGTCTGGGCAGCTGCAGTTTAACTCATCAACCAGCATCTCTGGGCGTTCGTGCTTTGAAATGAGGCCCCAGATGGGTAAGTTTAACAGGCAGCCTAGATTGGGAACCACAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572524 158 + 50890351 tttaaagaactccagggtctgggcagccgcagtttaactcatcaaccggcatctctgggcgttcgtgctttgaaatgaggccccagatgggtgagtttaacaggcagcctagattgggaaccacAGGTGCAGATCCGGAAGCTCAGGTCAGGCATTGA-------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=17672.000000 s hg38.chr19_GL949753v2_alt 678456 18 + 796479 ACCCCCCGCCCCCAAAAG s ponAbe2.chr19 56803019 18 + 60714840 ACCCCCCGCCCCCAAATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319482 18 - 106955855 ACTCCCCGTCCCCAAACG i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60618236 13 + 64156825 --CCCCCGCCCCC---CG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758977 13 + 59248254 --CCCCCGCCCCC---CG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863976 14 + 51301725 -ccccccgccccc---cG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572682 13 + 50890351 --CCCCCGCCCCC---CG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45925301 158 + 49145316 I e panTro4.chr19 59881226 0 + 63644993 C a score=442370.000000 s hg38.chr19_GL949753v2_alt 678474 219 + 796479 ACCTCTCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAACGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAGAGAGAAGCC---TTATTAGAGCTTTCTCAACCTGCAGCCCTCATCTCCGCCGGCGAGTAGGGCCAGGTGTTGGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAACTTCATTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA s ponAbe2.chr19 56803037 219 + 60714840 ACCTCTCAGTAGTTCCGGTGGATACAGGAAGTGCTCAGCAAGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGAAAGAGAAGCC---TTATTAGAGCTTTCTCCACCTACAGCCCCCATCGCCGCCGGAGAGTAGGGCCAGGTGTTGGGTGGTGAGTAGCTCTCCGGCAAGTCTGCAACTGCATTTGTTTATTTCTCCATTCCATAGT---------------TGGTAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103319500 219 - 106955855 ACCCCCCAGTAATTCCGGTGGATACAGGAAGTGCTCAGCAGCGATTACGCCCCGTGGGCCAATCACAGGGCTGCGGCCGAACGAGAAGCC---TTATTAGAGCTTTCTCAACCTACAGCCCTCACCGCCGCCGGAGAGTAGGGCCAGGTGCTGGGAGGTGAGTGGCTCTCCGGCAACTCTGCAACTTCCTTTCTTTATTTCTCCATTCCACAGT---------------TGGTAAAA i nomLeu3.chr10 C 0 I 524 s rheMac3.chr19 60618249 220 + 64156825 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TGGTAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55758990 220 + 59248254 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGTTTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGGAGCCTTTTTATTAGCGCTTTCTCAGCCTCCATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTACGAGGTGAGTATCTCTCCGGCAACTCTGCAACTTCATTTCTTTCTTTCTCCATTCCACAGT---------------TCGTAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47863990 220 + 51301725 ACCTCTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGGATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACATCCCTCAGTGCCGCCGGGGAGTGGTGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGcaacttcatttctttatttctcccttccaCAGT---------------tggtaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572695 220 + 50890351 ACCTTTCAGTAATTCCGGCGGATACAGGAAGTGCTCAGCAGGAATTACGCCCCGAGGGCCAATCACAGGGCTGCGGCCGA--GAGAAGCCTTTTTATTAGAACTTTCTCGGCCTACGTCGCTCAGTGCCGCCGGGGAGTGGGGCCAGGTGTTAGGAGGTGAGTAGCTCTCCGGCAGCTCTGCAATTTCATTTCTTTATTTCTGCATTCCACAGT---------------TGGTAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925459 232 + 49145316 GCCTCCCAGGATTCCTGGTGGGTACAGGAAGTGCCCAGCAATGGTCAGGCCCTGAGGACCAATCACAGG--TGGGGCAGAAAGAGAAACCTTTTTATTAGCGCCTTCTCAGCCTCCGGCACTCAG---AGCCGGGGAGTAGGGCCAGGCCTTGGGAGGTGAGTAGCTGCTGGGCAACCCTGCGGCTTCATTTCTGTGTTTCTCCATTCCACAGTTAGTTGTTGTCTCTATGGTAAAA i calJac3.chr22 I 158 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=6044.000000 s hg38.chr19_GL949753v2_alt 678693 8 + 796479 Tttctcct s ponAbe2.chr19 56803256 8 + 60714840 TTTCTCCt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320243 8 - 106955855 tttttttt i nomLeu3.chr10 I 524 C 0 s rheMac3.chr19 60618469 8 + 64156825 TGTCTCCT i rheMac3.chr19 C 0 I 1812 s macFas5.chr19 55759210 8 + 59248254 TGTCTCCt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864210 6 + 51301725 tttcct-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572915 8 + 50890351 tttctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45925691 7 + 49145316 ttcctcc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e panTro4.chr19 59881226 0 + 63644993 C a score=191197.000000 s hg38.chr19_GL949753v2_alt 678701 153 + 796479 tttatttcatatatttttttt---ct-gagacggagtctcgctctgtcgcccaggctggagtgcggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcaggccattctcctgcctcagcctcccgagtagctgagactacaggcacc s ponAbe2.chr19 56803264 154 + 60714840 tttatttcatatatttttttt---tttgggacgaagtctcgctctgtcgcccaggctggagtgaggtggcgcgatctcggctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320251 150 - 106955855 tttttttc---tttttttttt---tt-gaaacgaagtctggctctgtcgctcaggctggagtgcaatggtgcaatcttggcccactgcaagctc---cgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759218 151 + 59248254 ----ctttttttttttttttt-aatt-gagacagagtcttgctgtgtcgcccaggctggggtgtagtggggagatctcggctcactgcaaactc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i macFas5.chr19 C 0 I 28 s papAnu2.chr19 47864216 141 + 51301725 -----------tttttttttt---tt-gagacggagtctcactctgtcgcccaggctggagtgcagtggcctgatctcagctcac-gcaagctc---cacctcctgggtttacgccattctcctgcctcagcctcccgagtacctgggactacaggcgcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47572923 154 + 50890351 --tttttttttttttttttttaaatt-gagacagagtctcgctgtgtcgcccaggctggagtgcagtggggagatttcagctcactgcaagctc---cgcctcccgggttcccgccattctcctgcctcagcctcccgagtagctgggactacaggcgcc i chlSab2.chr6 C 0 I 28 s calJac3.chr22 45925698 131 + 49145316 ----------------ttttt---tt-gagac--agtctcactttgtcacccgggctagagtgcagtggtgcaatcaca------ttcaagcttgaacacctcccaggttcaagggagtttcatgcctcagcctcctgagtagctg-gactataggcatg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=4140.000000 s hg38.chr19_GL949753v2_alt 678854 20 + 796479 tgccactatgcccagctaat------------------------------ s ponAbe2.chr19 56803418 20 + 60714840 cgccaccacgcccagctaat------------------------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320401 20 - 106955855 catcaccacgctcggctaat------------------------------ i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864357 19 + 51301725 cgccacttcgcccggctaa------------------------------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45925829 50 + 49145316 agccaccacacatggccaaCATTGAATAGCTTTTCTTTCtttcttttctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I e panTro4.chr19 59881226 0 + 63644993 C a score=5570.000000 s hg38.chr19_GL949753v2_alt 678874 9 + 796479 -ttttttgta s panTro4.chr19 59881226 9 + 63644993 -ttttttgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803438 9 + 60714840 -ttttttgta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320421 8 - 106955855 --tttttgta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47864376 9 + 51301725 -gtttttgta i papAnu2.chr19 C 0 I 1 s calJac3.chr22 45925879 9 + 49145316 ttttttttt- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47573077 28 + 50890351 I e macFas5.chr19 55759369 28 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=204850.000000 s hg38.chr19_GL949753v2_alt 678883 120 + 796479 tttttagtagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagt----------------------ccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagccttttttttttttttttt s panTro4.chr19 59881235 129 + 63644993 tttttattagagacggggtttcac-catgttggccaggctgg-------------------------------tctcagtctcctgacctc--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803447 129 + 60714840 tttttagtagagacagggtttcac-catgttggccaggctgg-------------------------------tctcagtcttctgacctt--gtgatccgcccgcctcggcctcccaaggtgccgggattacaggcgtgagccaccgcgcccagcc-----------tttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320429 115 - 106955855 tttttagtaaagacggggtttcac-catgttggccaggatgg-------------------------------tctcagtctcctgacctt--gtgatccgcccgcctcggcctctcaaagtgtcgggattacagg-----------------GGCC--------ttttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759397 139 + 59248254 tttttggtagagactgggtttcac-cgtgttagccaggatag-------------------------------tctcgatctcctgacctt--gtgagccacccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-ttcttttttttttttt i macFas5.chr19 I 28 C 0 s papAnu2.chr19 47864386 139 + 51301725 tttttagtagagacggggtttcac-cgtgtcagccaggatgg-------------------------------tctcgatctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcc-tttttttttttttttt i papAnu2.chr19 I 1 I 12 s chlSab2.chr6 47573105 139 + 50890351 tttttagtagagactgggtttcac-cgcgttagccaggatgg-------------------------------tctcgatctcctgacctt--gtgagccgcccgcctcgacctcccaaagtgctgggatttcaggcgtgagccaccgcgcccggtc-CTttttttttttcttt i chlSab2.chr6 I 28 I 1 s calJac3.chr22 45925888 170 + 49145316 tttttttttgagtcggagttttgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcacgcgccaccatgcccagct-aatttttgtattt--- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=5618.000000 s hg38.chr19_GL949753v2_alt 679003 9 + 796479 ttttttttt s panTro4.chr19 59881364 9 + 63644993 ttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803576 8 + 60714840 tttttttt- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320544 9 - 106955855 ttttttttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573245 9 + 50890351 tttcttttt i chlSab2.chr6 I 1 I 240 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926058 0 + 49145316 C e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=134.000000 s hg38.chr19_GL949753v2_alt 679012 4 + 796479 cttc s panTro4.chr19 59881373 4 + 63644993 cccc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103320553 4 - 106955855 tttt i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e ponAbe2.chr19 56803584 0 + 60714840 C e calJac3.chr22 45926058 0 + 49145316 C e chlSab2.chr6 47573254 240 + 50890351 I e papAnu2.chr19 47864525 12 + 51301725 I e macFas5.chr19 55759536 0 + 59248254 C e rheMac3.chr19 60618477 1812 + 64156825 I a score=10590.000000 s hg38.chr19_GL949753v2_alt 679016 9 + 796479 tcttttttg s panTro4.chr19 59881377 9 + 63644993 tcttttttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803584 9 + 60714840 tcttttttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320557 9 - 106955855 ccttttttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759536 7 + 59248254 --ttttttg i macFas5.chr19 C 0 I 4 s chlSab2.chr6 47573494 9 + 50890351 tcttttttg i chlSab2.chr6 I 240 C 0 s calJac3.chr22 45926058 7 + 49145316 --ttagtag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864525 12 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=210405.000000 s hg38.chr19_GL949753v2_alt 679025 144 + 796479 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggttcaagcagtcctcacgcctcagcctttgaagtagctgggaccgtgggagggtgccaccacatctgttctg s panTro4.chr19 59881386 144 + 63644993 ----agggtcttactctgtttcccaggctggagcgctgtggcaggatctcggctcactgaacccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803593 144 + 60714840 ----agggtcttactctgtttcccaggctggagcgcagtggcaggatctcggctcactgaagccttgacctctcaggctcaagcaatcctcacacttcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320566 144 - 106955855 ----agggtcttactctgtttctcaggctggagcgctgtggcaggatctccgctcactgaagccttgacctctcaggctcaagcaatcctcacacctcagcctctgaagtagctgggaccgtgggagggtgccaccacatctgttctg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759547 139 + 59248254 ----ggagtctcgctctgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccacctcgcc-----cg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47864537 138 + 51301725 ----agagtctcgctgtgtcgcccaggctggggtgcagtggggagatctcagctcactgcaaactccgcctcccgggttcccgccattctcctgccccagcctcccgagtagctgggactacaggcg-ccgccaccacgcc-----cg i papAnu2.chr19 I 12 C 0 s chlSab2.chr6 47573503 144 + 50890351 ----agggtcttactctgtttcccaggctggagcattgtggcaggatctcagctcaccggagccttgacctcttgggcgcaagcaatcctcgcacctgagcctctgaagtagctgggaccgtgggagggtgccaccacatctctcatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926065 115 + 49145316 agacggggtttcaccttgttgaccaggatgg-------------------------------tctcgatctcttgacctcatg--atccacccgccttggcctcccaaagtgctgggattataggcgtgagccaccgcgcccggccTG i calJac3.chr22 C 0 I 482 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=33797.000000 s hg38.chr19_GL949753v2_alt 679169 46 + 796479 gctaataatattat--tattaccactgtttgcagagactcactagatg s panTro4.chr19 59881530 46 + 63644993 gctaataatattat--tattaccactgtttgtagagactcactagatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803737 46 + 60714840 gctaataataatat--tattaccactgtttgtagagactcactagatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320710 46 - 106955855 gctaataataatat--tattaccactgtttgtagagactcactagatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759686 29 + 59248254 gctagt-------t--ttttgtattttttagtagagac---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864675 29 + 51301725 gctaat-------t--ttttgcattttttggtagagac---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47573647 41 + 50890351 gctaaa-------taatattatcactctttgtagggactcactagatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926180 482 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=211798.000000 s hg38.chr19_GL949753v2_alt 679215 130 + 796479 tagggtcttaatatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaaat-tctgggattataggcaggtgccaccgcgcccggccTAAATCTTTTCTTCTGTT s panTro4.chr19 59881576 125 + 63644993 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaagt-tctgggattacaggcaggtgccaccgcgcccggccTAAA-----TCTTCTGTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803783 130 + 60714840 tagggtcttagtatgttgccgaagctggtctctaactcctgggctcaagcgatcttcatgcctcagactcccaaagt-tctgggattacaggcaggagccaccgcgcctggccTAAATCTTTTCTTCTGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320756 130 - 106955855 tagggtcttagtatgttgcggaagctggtctctaactcctgggctcaagcgatcttcctgcctcagactcccaaact-cctgggattacaggcaggagccactgcgcccggccTAAATCTTTTCTTCTGTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759715 127 + 59248254 -ggggtttcaccgtgttaaccaggatggtctggatctcccgacctc--gtgatccgcccgtctcggcctcccaaagt-gctgggattacaggcttgagccaccgcgcccggcctttttttttttttttctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47864704 127 + 51301725 -ggggtttcaccgtgttagccaggatggtctccatctcctgacctt--gtgagcctcccgcctcgacctcccaaagt-gctgggatttcaggcgtgagccaccgcgcccggtctttttttttttttttttt i papAnu2.chr19 C 0 I 1181 s chlSab2.chr6 47573688 131 + 50890351 tagggtgttagtatgttgcccaagctggtctctaactcccgggctccagagatcttactgcctcagactcccaaaatggctagaattacaggcaagagccaccgttcccggccTAAATCTTGTCTTCTGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926662 130 + 49145316 tggggtttctccatgttggtcaggctggtctcgaactcctgacctcagatgatccgcctgcctcagcctcccaaagt-gctggaattacagggaggagccgcctcgcccagGCTAAACCTTTTCATCTGTT i calJac3.chr22 I 482 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3279.000000 s hg38.chr19_GL949753v2_alt 679345 2 + 796479 AG s panTro4.chr19 59881701 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803913 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320886 2 - 106955855 AG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55759842 2 + 59248254 gg i macFas5.chr19 C 0 I 1169 s chlSab2.chr6 47573819 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926792 2 + 49145316 AG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=48227.000000 s hg38.chr19_GL949753v2_alt 679347 54 + 796479 AAATTAAGTGGTTCTGCCTGTCTcagtgg--ctcacgcctgtaatcgcagcgcttt s panTro4.chr19 59881703 56 + 63644993 AAATTCAGTGGTTCTGCCTGTCTCAGTGGCTctcacgcctgtaatcgcagcgcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803915 53 + 60714840 AAACTCAGTGG-TCTGCCTGTCTcagtga--ctcacgcctgtaatcgcagcgcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320888 54 - 106955855 AAATACAGTGGTTCTGCCTGTCTCCgtgg--ctcacgcctgtaatcgcagcgcttt i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573821 54 + 50890351 AAGTTCAGTGGTTCTgccggtctcggtgg--ctcacacctgtaataccagcgctgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45926794 50 + 49145316 AAATTCAGTGGTTTGGGCAA----GGTGG--CTCATGTCTGTCATCCTAGCACCtt i calJac3.chr22 C 0 I 3424 e canFam3.chr1 20036246 5018 - 122678785 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=96956.000000 s hg38.chr19_GL949753v2_alt 679401 130 + 796479 gggaggccgaggcgggaggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtagcgcatacttgtaatcctagct s panTro4.chr19 59881759 130 + 63644993 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgaccaacatgtagaaaccccatctctactaaaaatatacaattaggtgggcgtgggagcgcatgcttgtaatcccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56803968 130 + 60714840 gggaggccgaggcgggcggatcacctgaggtcgggagttcgagaccagcctgatcaacatgtagaaaccccatctctcctaaaaatgtaaaattaggtgggcgtggtagcgcatgcctgtaatcccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103320942 130 - 106955855 gggaggccgaggtgggcggatcactggaggtcgggagttcgagaccagcctgaccaacttgtagaaaccccatctctactaaaaatataaaattaggtgggcgtggtggctcatgcctgtaatcccagct i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47573875 113 + 50890351 gggagggcaaggcgggcagatcacctgaggtga-----------------tgaccaacatgtagaaaccccgtctccactaaaagtataaaatgaggtgggcatggtggagcatgcctgtaatcccagct i chlSab2.chr6 C 0 I 464 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=3559.000000 s hg38.chr19_GL949753v2_alt 679531 7 + 796479 actcagg s panTro4.chr19 59881889 7 + 63644993 actcggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804098 7 + 60714840 actcggg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321072 7 - 106955855 actcagg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e chlSab2.chr6 47573988 464 + 50890351 I e papAnu2.chr19 47864831 1181 + 51301725 I e macFas5.chr19 55759844 1169 + 59248254 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=6111.000000 s hg38.chr19_GL949753v2_alt 679538 3 + 796479 agg s panTro4.chr19 59881896 3 + 63644993 agg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804105 3 + 60714840 agg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321079 3 - 106955855 agg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761013 3 + 59248254 agg i macFas5.chr19 I 1169 C 0 s papAnu2.chr19 47866012 3 + 51301725 agg i papAnu2.chr19 I 1181 C 0 s chlSab2.chr6 47574452 3 + 50890351 agg i chlSab2.chr6 I 464 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e rheMac3.chr19 60618477 1812 + 64156825 I a score=358358.000000 s hg38.chr19_GL949753v2_alt 679541 175 + 796479 ctgaggcaggagaatcacttgaacccgggaagcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aaaaaataaaataaaataaaaTTCAGTGGTTCTGACTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC s panTro4.chr19 59881899 170 + 63644993 ctgaggcaggagaatcacttgaacccgggaggcggaggttgcggggagcctagatcataccattgctctccagcctgcgcagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGATTGGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804108 170 + 60714840 ctgaggcaggagaatcacttgaacccgggaggcggaggttgtggggagccgagatcataccattgctctccagcctgcacagcaagagagaaactgtctc----aa-----aaaataaaataaaaTTCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321082 165 - 106955855 ctgaggcgggagaattgtttgaacctgggaggcggaggtttcggggagccgggatcataccattgctctccagcctgcacagcaagaaagaaaccgtctc----aa----------aaaataaaGTCCAGTAGTTCTGAATTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGAGACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620289 168 + 64156825 ctgaggcaggagaatcccttgaacccaggaggcggaggttggggggatccgagttcgtgccactgcactccagcctgggcagcaagagagaaactctctc-----------aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i rheMac3.chr19 I 1812 C 0 s macFas5.chr19 55761016 174 + 59248254 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagagagaaactctctcaaaaaa-----aaaaaaaaaaaaaaTGCAGTGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866015 173 + 51301725 ctgaggcaggagaatcccttgaacccgggaggtggaggttgtggggatccgaggtcatgccactgcactccagcctgggcagcaagagagaaactgtcta-acaaa-----aaaaaaaaaaaaaattcagtggttCTGACTTGGGAAGGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i papAnu2.chr19 C 0 M 256 s chlSab2.chr6 47574455 166 + 50890351 ctgaggcaggagaatcccttgaacccgggaggcggaggttgcggggatccgaggtcgtgccactgcactccagcctgggcagcaagcgagaaactgtctc-------------aaaaaaaaaaaaTTCAGCGGTTCTGACTTGGGAAAGAGTAGCAGATGCTTAGATCTAGAGTGTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=229315.000000 s hg38.chr19_GL949753v2_alt 679716 168 + 796479 TAGTTAAGGTTGGCTCATAAGAGGATAGTTGTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC---AAAAAAAAAAATATATTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCAGTGCTAAGGTTTTGTGTC s panTro4.chr19 59882069 168 + 63644993 TAGTTAAGGTTGGCTCATAAGAGGATAGTTTTGTGTGCTTTTATTTCTGTTCTCTT---GGATTTAGGATAGAGCTATAGAGAGCTCCAAAAAAAAAAAAAAAATGTTGGAACAGGTCAGATGCTGTGGTTGCTGTGTGAGGAGTCCTGGGCAGTGCTAAGGTTTTCTGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804278 161 + 60714840 T-----ACGTTGGCTCACAAGAGGATAGTTTTGTGTGC-TTTATTTCTGTTCTCTTGGGGGATTTAGGATAGAGCTATAGAGAGCTCC----AAAAAAAAAATATGTTGGAACAGGTCAGATGCTGAGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTAAGGTTTTGTGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321247 166 - 106955855 TAGTTTATGTTGGCTCATAAGAGGATAGGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAAGATAGAGCTATAGAGAGCTCC-----AAAAAAAAATACATTGTAACAGGTCAGATGCTGTGATTGCTGTATGTGTAGTCCTGAGCAGTGCCCACGTTTTGCATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620457 151 + 64156825 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761190 151 + 59248254 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C----AAAAAACAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47574621 153 + 50890351 TAGTTTACATTGGTTCATAAGAGGATAAGTTTGTGTGCTTTTATTTCTGTTCTCTTGGGGGATTTAGAATAGAGCT-----------C--AAAAAAAAAAAAAA---TGGAACAGGTCAGATGCTGTGGTTGCTGTGTGTGGAGTCCTGGGCGGTGCTGAGG--TTGTGTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e papAnu2.chr19 47866188 256 + 51301725 M a score=399977.000000 s hg38.chr19_GL949753v2_alt 679884 192 + 796479 TAATGAGTCCTCTTAACAAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGCCTCTTAG-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAAAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C s panTro4.chr19 59882237 191 + 63644993 TAATGAGTCCTCTTAA-AAGAAGGTATTGTTTTT-TAT--TCACTGAGGTGAGGGAGACTCTTAC-CATCATTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i panTro4.chr19 C 0 I 325 s ponAbe2.chr19 56804439 191 + 60714840 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCACTGGGGCGACAGAGCCTCTTAG-CAGCGTTCTAGTCCAGCTTCCGGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCACGCTATTCACAGCTATCATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321413 193 - 106955855 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TATAAACATTGAGGTGACGAAGCCTCTTAG-CATTGTTTTAGTCCAGCTTCCAGACCTGAGTCTTATGCAAATACCTATGCCAGTTGCCATTCTCAAGTTATTCACAGCTATCATCTAGAGAGGTGTTATACCCTTTCTGTAAAGTTTTTGTTGCTGCTA--t i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60620608 184 + 64156825 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTG--C i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761341 184 + 59248254 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCA-------CATATAGAGAGGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTA--C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866444 192 + 51301725 TAATGAGTCCTCTTAA-CAGAAGGTATTGTCTTTCTAT--TCATTGAGGTGGTGGAGCCTCTTATACCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCACGTTATTCACAGCTAGCATATAGAGAGGTGTTACACCCTGTCTGTAAAG-TTTTGTTGCTactg--c i papAnu2.chr19 M 256 C 0 s chlSab2.chr6 47574774 185 + 50890351 TAATGAGTCCTCTTAA-GAGAAGGTATTGTCTTT-TAT--TCATTGAGGTGGTGGAGCCTCTTAT-CCTCATTCTATTCCAGCTTCTGGACCTGAGTCTTATGCAAATACCTATGCTAGTTGTCATTCTCA-GCAGCTAG-------CATATAGAGAAGTGTTACACCCTTTCTGTAAAGTTTTTGTTGCTACTGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=696.000000 s hg38.chr19_GL949753v2_alt 680076 2 + 796479 TA s ponAbe2.chr19 56804630 2 + 60714840 TA i ponAbe2.chr19 C 0 I 4 s nomLeu3.chr10 103321607 1 - 106955855 t- i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60620792 2 + 64156825 TA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761525 2 + 59248254 TA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866636 2 + 51301725 ta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574959 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I e panTro4.chr19 59882428 325 + 63644993 I a score=2680.000000 s hg38.chr19_GL949753v2_alt 680078 1 + 796479 --t s panTro4.chr19 59882753 1 + 63644993 --t i panTro4.chr19 I 325 C 0 s ponAbe2.chr19 56804636 1 + 60714840 --t i ponAbe2.chr19 I 4 C 0 s nomLeu3.chr10 103321608 1 - 106955855 --t i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620794 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55761527 3 + 59248254 TAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866638 3 + 51301725 tat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574961 3 + 50890351 TAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45926844 3424 + 49145316 I a score=173328.000000 s hg38.chr19_GL949753v2_alt 680079 73 + 796479 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct s panTro4.chr19 59882754 73 + 63644993 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacagtggcgctatctcagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804637 73 + 60714840 tttttttttt------ttttttttgagacaaagtctagctctgtttcccaggctggagtacaatggcgctatctcagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321609 73 - 106955855 tttttttttt------ttttttttgagacaaagtctagctctgttgcccaggctggagtacaatggtgctatctcagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60620797 71 + 64156825 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcactacctcagct i rheMac3.chr19 C 0 I 438 s macFas5.chr19 55761530 71 + 59248254 ATATATAAtt------ttgttgttgagacaaag--tagctctgtttcccaggctggagcgcaatggcgctacctcagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866641 77 + 51301725 atatataattttgttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47574964 74 + 50890351 ATATATAAtt---ttgttgttgttgagacaaag--tagctctgtttcccaggctggagtgcaatggcgctacctcagct i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930268 73 + 49145316 tttttttttt------tttgttttgagacagcgttttgctctgttgcccaggctggagtgcagtggcacagtctcagct i calJac3.chr22 I 3424 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=385887.000000 s hg38.chr19_GL949753v2_alt 680152 179 + 796479 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg s panTro4.chr19 59882827 179 + 63644993 cactgcaacttccacctcccaggttcaagcaattctcgtgcctcagccttctaagtagctgggactacagccgcctgtcacca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccaccttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804710 174 + 60714840 gactgcaacctccacttcccaggttcaagcaattct-----ctcagcctcctaagtagctgggacgacagccgcctgtcagca-acctggctaattttcgtatttttagtcgatatagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccatctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321682 178 - 106955855 cagtacagcctccacctcccaggttcaagcaattctcgtgcctcagcctcttaagtaggtgagactacagccgcctgtcacc--acgtggctaattttcatatttttagtcgatatggggtttcactacgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761601 174 + 59248254 cactgcaacctccacctcccaggttcaagcaattctcgtacctc------ctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtaatcctcccgcttcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866718 180 + 51301725 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagccttctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcgtatttttagtcaatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcccgcttcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575038 180 + 50890351 cactgcaacctccacctcccaggttcaagcaattctcgtacctcagcctcctaagtagctgggcctacagccgcctgtcaccatgtccagctagttttcatatttttagtcgatagagggtttcactatgttggccaggctggtctcaagctccagacctcaggtgatcctcctgcttcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930341 180 + 49145316 cactgcaacctccaccccccaggttcaagcaattgtcctgcctcagcctcccaagtagctgggattacaggtgcccgccaccacacgtggctaattttcatatttttagtagggggcgggtttcaccatgttggccaggctagtctcaaactcctgacctcagatgatccttccacctcg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=59431.000000 s hg38.chr19_GL949753v2_alt 680331 42 + 796479 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc s panTro4.chr19 59883006 42 + 63644993 gactcccaaagtgctgtgattacaggcgtgagccaccgcacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804884 42 + 60714840 gcctcccaaagtgctgcaattacaggcgtgagccaccccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321860 42 - 106955855 gcctcccaaagtgctgggattacaggtgtgagccatcccacc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866898 42 + 51301725 gcctccctaagtgctggtattacaggcgtgagccaccccagc i papAnu2.chr19 C 0 I 28 s chlSab2.chr6 47575218 39 + 50890351 gcctccctaagtgctggtattacaggcatgagccaccCc--- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930521 42 + 49145316 gcctcccaaagtgctgggatgataagcgtgagccactatgcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=54718.000000 s hg38.chr19_GL949753v2_alt 680373 72 + 796479 cggccCTGttgtt---tttaaaatagagacagggtc---ttaagttgccaggctggtctggaacttctggactggagt s panTro4.chr19 59883048 75 + 63644993 cggccCTGttgttgtttttaaaatagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56804926 75 + 60714840 cggccCTGTTGTCGTTTTTAAAAtagagacagggtc---ttatgttgccaggctggtctggaacttctggactggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321902 75 - 106955855 cggccCTGCTGttgtttttaaaatagagacagggtc---ttatgttgccaggcttgtctggaacttctggactggagt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22 45930563 76 + 49145316 ccgccCTGCTGCTGtttttgaaatagagacagagttttgttacattaacaggctggtctagaacttctgggctgga-- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e chlSab2.chr6 47575257 0 + 50890351 C e papAnu2.chr19 47866940 28 + 51301725 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=3611.000000 s hg38.chr19_GL949753v2_alt 680445 14 + 796479 gat-cacccacctga s panTro4.chr19 59883123 14 + 63644993 gat-cacccacctga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805001 15 + 60714840 gatccacccacctca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321977 15 - 106955855 gatccacccacctca i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47866968 14 + 51301725 ggc-caccaccccca i papAnu2.chr19 I 28 C 0 s chlSab2.chr6 47575257 1 + 50890351 --------------a i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930639 9 + 49145316 ------cccaccaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e macFas5.chr19 55761775 0 + 59248254 C e rheMac3.chr19 60620868 438 + 64156825 I a score=549830.000000 s hg38.chr19_GL949753v2_alt 680459 273 + 796479 gcttcccaaagtgcggggattgcaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacaatttttttt-ttttttgtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc s panTro4.chr19 59883137 267 + 63644993 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccgctatgcccagcacaatttttttt-------gtattt-ttttgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcaatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805016 271 + 60714840 gcttcccaaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTTTT--------TGTTTGTTTTAcctggctggagtgcagtggtgtgaccaaagctcactgcagccttaacttccctggctcaggtgatcctcccacctcagcctcctcagtagctgggactacaggtgcatgccactatgcccagcacatctttttat---ttttttattt-ttttgtagagacagggttttgccatgttgcccaggctggtcttagactc-------caagcaatcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103321992 271 - 106955855 gcttcccaaagtgcggggattacaaacatcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttctctagctcaggtgatcctcccacctcagcctcctcagtagctgggaccacaggtgcatgccactatgcccagcacattttttttttttttttgtatttctttcgtagagacagggttttgccatgttgcccaggctggtctcaaactc-------caagcagtcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55761775 270 + 59248254 gcctccctaagtgcggggattacaagcgtcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctagagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccacctcagtgtcctgagtagctgggactacaggtgcatgccactatgcccagcgcttttttgtttgtttgtttgcttt-ttttgtggagacagagttttgccatgttggccagtctggtctgaaactc-------caagcaatcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47866982 258 + 51301725 gcctcccaaagtgcggggattacaagcctcagccaccacccccagtgttgtgtt------------tctgttttaccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcaggtgatcctcccgcctcagcatcctgagtagctgggactacaggtgcatgccactatgcccagcactttt-------tttgtttg------tttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------taagcgatcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47575258 262 + 50890351 gcttcccaaagtgcggggattacaagcctcagccaccacccccagTGTTGTGTT------------TTTGTTTTAccaggctggagtgcagtggtgcgatcacagctcactgcagccttaacttccctagctcagttgatcctcccacctcagcgtcctgagtagctgggactacaggtgaatgccactatgcccagcacttt--------tttgtttgcttt-ttttgtagagacagagttttgccatgttggccaggctggtctgaaactc-------caagcaatcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45930648 281 + 49145316 gctttccaaagtgctgggatgacaagcgtgagccaccgcacccggTGtttttttttttctgttattttttttttaccaggctggggtgcagtggtgtgattgtggctcactgcagccttaaa-tcctgggctcaggtgatcctcccacttcagcctccttagtagctgggattacaggtgcatgccaccgtgcccagcacatga-------atttttgtattt-tttggtagagagagggttttgccatgctctccaggctggtctcaaactccttggcgcaagcaatcc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60620868 438 + 64156825 I a score=396688.000000 s hg38.chr19_GL949753v2_alt 680732 142 + 796479 tcccaccttggcttcccaaagtgtttggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAAGTTATCTTTAA------GCCtttttttttttt--- s panTro4.chr19 59883404 141 + 63644993 tcccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCGCTAAGTTATCTTTAA------GCCtttttttttttt--- i panTro4.chr19 C 0 I 12 s ponAbe2.chr19 56805287 136 + 60714840 ccccaccttggcttcccaaagtgtt-ggggttccaggtgtgagccatggccccccggccAGCTTCAGTACAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCACTAACTCATCTTCAA------GCCttttttt-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322263 140 - 106955855 tcccgccttggcttcccaaagtgtt-ggggttccaggcgtgagccatggccccccggccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGA-ACCAGGCTCCACCACTAACTCATCTTCAA------GCCtttttttttttt--- i nomLeu3.chr10 C 0 I 23 s rheMac3.chr19 60621306 140 + 64156825 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccagcttcagtaAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCTTCAA------GCCtttttctttttt--- i rheMac3.chr19 I 438 I 1988 s macFas5.chr19 55762045 140 + 59248254 tcccgccttggcttcccaaagtgct-ggggttacaggtgtgagccacgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCCTCTTCAA------GCCtttttttttttt--- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47867240 140 + 51301725 tcccaccttggcttcccaaagtgct-gggattacaggtgtgagccacgg-gcCCCAGCCAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATcttcaa------gctcttttttttttt--- i papAnu2.chr19 C 0 I 17 s chlSab2.chr6 47575520 140 + 50890351 ttccgccttggcttcccaaagtgct-ggggttacaggtgtgagccatgg-cccccagccAGCTTCAGTAAAGTAAAAGCCACACACCTGTGTCCTGAGACCAGGCTCCACCTCTAACTCATCCTCAA------GCCtttttttttttt--- i chlSab2.chr6 C 0 I 15 s calJac3.chr22 45930929 149 + 49145316 tcccaccttggcttcccaaagtgtt-ggtgttacaagtgtgagccacgg-cacctggtcAGCTTCAGTAAAGTAAAAGCCAGACACCTGTGTCCTGAGACCAGGCTCCACCACTCACTCACCTTCAACTCAATGttttttccttttttttt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=41621.000000 s hg38.chr19_GL949753v2_alt 680874 24 + 796479 --gagacagtttcactcttgtcgccc s panTro4.chr19 59883557 24 + 63644993 --gagacagtttcactcttgtcaccc i panTro4.chr19 I 12 C 0 s ponAbe2.chr19 56805423 24 + 60714840 --gagacagtttcactcttgtcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322426 24 - 106955855 --ttgacagtttcactcttgtcgccc i nomLeu3.chr10 I 23 C 0 s macFas5.chr19 55762196 24 + 59248254 --gagacagtttcactcttgttgccc i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47867397 24 + 51301725 --gagacagtttcactcttgttgccc i papAnu2.chr19 I 17 C 0 s chlSab2.chr6 47575675 24 + 50890351 --GAGACAGTTTCACTCTTGTTGCCC i chlSab2.chr6 I 15 I 1446 s calJac3.chr22 45931078 24 + 49145316 tagatggagtctagctctc-tcacc- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=185907.000000 s hg38.chr19_GL949753v2_alt 680898 124 + 796479 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacgcc s panTro4.chr19 59883581 124 + 63644993 caggctggagtgcagtggcgccatgtcagctcaccacaacctctgcctcccactcccaggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcacctgccaccacacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805447 124 + 60714840 caggctggagtgcagcggtgccatgtcagctcaccacaacctccgcctcccactctcgggttcaagcgattctcctgcctcagcctcccaagtagctggaactacaggcgcacaccaccacact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322450 124 - 106955855 caggctggagtgcaatggcaccatgttggctcaccacaacctctgcctcccactcccgggttcaagcaattctcccgcctcagcctcccaagtagctggaactatgggtgcccgccaccagacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55762220 113 + 59248254 caggctggagttcaatg-----------gctcaccacaccctcggcctcccactcccgggttctagcgattctcctgcctcagcctcccaagtagccaggactacaggcatgtgtcaccacgcc i macFas5.chr19 C 0 I 1478 s papAnu2.chr19 47867421 75 + 51301725 caggctggagttcaatg-----------gctcaccaca--------------------------------------gcctcagccccccaagtagccgggactacaggcatgtgtcaccacacc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577145 115 + 50890351 caggctggagtgcagtggcgccatctcagctcactgca------agctctgcctcccgggttcatgccattct---gcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcc i chlSab2.chr6 I 1446 C 0 s calJac3.chr22 45931102 117 + 49145316 caggctggagtgcaatggcacaatctcgtctcactgcaacccctgc------ctcctgagttcaagcgattttcctgcttaaggctctcgagtagctgtgactacaggcacacaccacc-cact i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125174.000000 s hg38.chr19_GL949753v2_alt 681022 61 + 796479 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc s panTro4.chr19 59883705 61 + 63644993 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805571 61 + 60714840 cggctaattttt-tgtattttc--agtagagacggggtttcactgtgttagcaaggatggtctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322574 61 - 106955855 cggctaattttt-tgtattttt--agtagagacggggtttcactgtgttagccaggatggtctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763811 61 + 59248254 cggctaattttt-tgtattttt--agtagagatggggtttcactgttttagccaggatggtctt i macFas5.chr19 I 1478 C 0 s papAnu2.chr19 47867496 60 + 51301725 cgactaa-tttt-tgtactttt--agtagagacggggtttcatcatattggccaggctggtctc i papAnu2.chr19 C 0 I 1592 s chlSab2.chr6 47577260 61 + 50890351 cggctaatgttt-tgtattttt--agtagagacggggtttcactgttttagccagaatggtctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931219 64 + 49145316 tggccaccttttgtatattttttaaatagagatggggtttcaccatgttggccaggctggtctt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=71186.000000 s hg38.chr19_GL949753v2_alt 681083 33 + 796479 gatctcctgacctca--cgatccgcccgcctcggc s panTro4.chr19 59883766 33 + 63644993 gatctcctgacctca--cgatccgcccacctcggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805632 33 + 60714840 gatctcctgacctca--tgatccgcccgcctcggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322635 33 - 106955855 gatctcctgacctcg--tgatccgcccacctcagc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55763872 33 + 59248254 gatctcctgacctca--tgatccacctgcctcagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869148 33 + 51301725 gatctcctgacctcg--tgatccacctgcctcagc i papAnu2.chr19 I 1592 C 0 s chlSab2.chr6 47577321 33 + 50890351 gatctcctgacctcg--tgatccacctgcctcagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931283 35 + 49145316 gaactcctgaccccaagtgatctgcctgcttcagc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e rheMac3.chr19 60621446 1988 + 64156825 I a score=125391.000000 s hg38.chr19_GL949753v2_alt 681116 42 + 796479 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcccg s panTro4.chr19 59883799 42 + 63644993 ctcccaaagtgctgggattgcaggcgtgagccaccgcgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805665 42 + 60714840 ctcccaaagtgctgggattacaggcgtgagccactgcgccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322668 42 - 106955855 ctcccaaagtgctgggattacaggcgtgagccactgcgtccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623434 42 + 64156825 ctcccaaagtgctgggattacaggcgtgagccaccgtgcctg i rheMac3.chr19 I 1988 C 0 s macFas5.chr19 55763905 41 + 59248254 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869181 41 + 51301725 -tcccaaagtgctgggattacaggcgtgagccaccgtgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577354 41 + 50890351 -tcccaaagtgctgggattataggcgtgagccaccgtgcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45931318 42 + 49145316 ctcccaaagcgctgggattacaggtatgagccatctcacctg i calJac3.chr22 C 0 I 1750 e canFam3.chr1 20036246 5018 - 122678785 I a score=129125.000000 s hg38.chr19_GL949753v2_alt 681158 54 + 796479 gcTGTGTGTTTGCATTATCATATTCAGCCCAGTTTTCACGAAGTTTCTTGTCTC s panTro4.chr19 59883841 54 + 63644993 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTTTCTTGTCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805707 54 + 60714840 gctGTGTGTTTGCATTTTCTTATTCACCCCAGTTTTCACAAAGTGTCTTGTCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322710 54 - 106955855 gcTGTGTGTTTGCATTTTCATATTCACCCCAGTTTTCACGAAGTGTCTTGTCTC i nomLeu3.chr10 C 0 I 123 s rheMac3.chr19 60623476 54 + 64156825 gctgtgtgtttgcattttcaCATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55763946 54 + 59248254 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869222 54 + 51301725 gctgtgtgTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577395 54 + 50890351 gcTGTGTGTTTGCATTTTCACATTCACCCCAGTTTTCATGAAGTGTCTTATCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=440166.000000 s hg38.chr19_GL949753v2_alt 681212 188 + 796479 CTGGGTGATCCACGTAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA s panTro4.chr19 59883895 188 + 63644993 CTGGGTGATCCACATAGCTCCCCACTTCCTTATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805761 188 + 60714840 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGCTATAATGAGAGAGTGTTTTCGCTTTACAGGTTAACTTTTAGAACCTGAGCAGCCCCTCGGAGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103322887 188 - 106955855 CTGGGTGATCCACATAGCTCCCCACTTCCTCATCTGATCTATGCTTCTCCTTTCATTGTTGTATAACTACTTTGCTATAATGAGAGAGTGTTTTTGCTTTATAGGTTAACTTTTAGAACCTGAGCAGCCCCTCAGGGAAAACCCTGACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i nomLeu3.chr10 I 123 C 0 s rheMac3.chr19 60623530 186 + 64156825 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAAT--GAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764000 188 + 59248254 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTGTGCTTGTCCTTTCATTGTTGTGTTACTACTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCGGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATGAAAATAACTAGCTGGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869276 182 + 51301725 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTGCTTTGTTGTAATGAGAGAGTGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACA------GGTTATTttgcaattaaaataactagCTGGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577449 188 + 50890351 CTGGGTGATCCACATAGCTTTCCACTTCCTCATCCGATCTATGCTTGTCCTTTCATTGTTGTGTTACTACTTGGTTGTAATGAGAGAGAGTTTTTACTTCATAGGCTAACTTTTAGAGCCTGAGCAGTCCCTCAGGGAAAACCCTAACAGTAGCTGGTTATTTTGCAATTAGAAAAACTAGCTGGGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20036246 5018 - 122678785 I e calJac3.chr22 45931360 1750 + 49145316 I a score=1676010.000000 s hg38.chr19_GL949753v2_alt 681400 630 + 796479 ctgaggcaggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaacccccc-------atctctactaaaaatacaaaaaaattagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactccgtctcaaaaaaaaaaaaaaaaaaaata------------caaaaaGtagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaactgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcatggagatgggggtctcactatgttgcccaggc s panTro4.chr19 59884083 630 + 63644993 ctgaggcaggtgaatcac--aaggtcaggagttcgagaccagcctggccaacttggtgaaaccccccccccccaatctctactaaaaatacaaaaaa-ttagctgggcacagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgtagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaa------------------aaGGagctgagc---gtggtggtgggtgcccata--atcccagctagtcgggaggctgaggcaggagaattgtttgaacctgggaggcagaggttgcagtgagctgagatcgtactactgtactccagcctgggctgcagagtgaaa--ctctctcaaaaataagtaaataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagcaatcctcccactgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttatttttcgtggagatgggggtctcactatgttgcccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56805949 617 + 60714840 ccaaggcgggtgaatcac--gaggtcaggagtttgagaccagcctgg-caacttggcgaaaccccc--------atctctactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatcccggaggcggaggttccagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagattccgtctcaaaaaaaaaaatacaaa---------------------aaGtagctgagc---gtggtggtgggtgcccata--atcccagctactcgagaggctgaggcaggagaattgtttgaacctgggaagcagaggttgcagtgagctgagatcgtactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagt-aataaaaataaaaTGAGTTGAggtcttgctctgttgcccagatgggagtgcagtggcacaatcaaggctcactgcagtttcagtctcccaggctcaagtgatcctcccaccgcagcctcctgagtagctgggactacaggcatgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactatgttgcccaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323075 642 - 106955855 ccgaggtgggtgaatcac--gaggtcaggagttcgagaccagcctggccaacttggtgaaaccccc--------atctgtactaaaaatacaaaaaa-ttagctgggcatagtggtgaatgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccgggagatagaggttgcagtgagccgagattgcagcactgcactccagccagggtgac-aaagtgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAAAAAGtagccgagcgtggtggtggtgggtgcccata--atcccagctactcgggaggctgaggcaggagaattgtttgaacctgggaggcggaggttgccgtgaactgagatcatactactgcactccagcctgggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaaataaaatgagctgaggtcttgctctgttgtccagatgggagtgcagtggcacaatcaaggctcactgcagtttcaatctcccaggctcaagcaatcctcccatcgcagcctcctgagtagctgggcctacaggcatgtacc-ccacccactgct---aacttactttttgtggagatgggggtctcactatgttgcccaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60623716 612 + 64156825 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaat----aaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgtccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764188 613 + 59248254 Tcgaggtgggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtaatcccagctgcacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aaGtagctgagt------gtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcaatgagctgagatcataccactgtactccagcctgggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactacaggcatgcaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47869458 614 + 51301725 TCGAGGCGGGcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaat-caaaaa--ttagct-ggcatagtggtgaacacctgtaatcccagctacacgggtggctgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagctgagattgtagcaatgcactccagccagggtgac---agtgacactccgtctcaaaaaaaataaaaaaata--------------------aagtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggcaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgaactccaaccagggcagcagagtgaaa--ctgtctcaaaaataagtaaataaaagtgaAACGAGAttaggtttcactctgttgcccagatgggagtgcagtggcacaatcaagcctcactgcagtttcaatctcccaggctcaagcgatcctcccacctcggcctcctgagttgctgggactataggcatgcaccaccagccACTGCT---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47577637 614 + 50890351 Tcgagaggggcgaatcag--gaggtcaggagttcgagaccaacctggccaacttggtgaaacccc---------atctctactaaaaatacaaaaa--ttagctgggcatagtggtgaacacctgtgatcccagctacacgggcagctgaggcaggagaattgcttgaatccgggaggtggaggtcgcagcgagctgagattgtagcagtgcactccagccagggtgac---agtgacactccgtctcaaaaaaaa--aataaata--------------------aaGtagctgagt---gtggtggtgggtgcccata--atcccagctactcggaagactgaggtaggagaattgtttgaacctgggaggcggaggttgcagtgagctgagatcataccactgtactccagccagggcagcagagtgaaa--ctatctcaaaaataagtaaataaaagtaaaaCgagatgaggtttcactctgttgcccagatgggagtgcagtggcaccaccaggcctcactgcagtttcagtctcccaggctcaagcgatcctcccacctcggcctcctgagttgctggggctacaggcacgtaccaccacccactgct---aacttattttttgtggagatgggggtctcactgtgttgcccaggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933110 622 + 49145316 ccaaagtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggaaaaacctt---------ctttctcctaaaaatacaaaaaa-gtatccaggtgtggtggtgcacacctgtaatcccagctactcgggaggccgaggcgggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatggtgccattgcacttcagcctgggcaatgagagcgaaactccatctcaaaataaataataaaataaaat----------------gaggagctgggt---gcggtgg-gcatgcacgtgtcatctcatctactgaggaggctgaggcaggagaatggcttgaaaccagcaggcggaggttgcagtgagccaagatcatgccattgcactccagcctgggggagaaagtgagactctgtctcaaaaataa---aat-aaattaaaaagagaTGAggtcctgctctgttgcccagatgggagtgcagtgggacaatcaagg------gcagttttaacctcccaggttcaagcgatcctcccacctcagcctcctgagtagccgggactgcagctgcacaccaccccctcctaccatgaacttattttttgtggaaatgggggtctcactatgttgcccaggc i calJac3.chr22 I 1750 C 0 e canFam3.chr1 20036246 5018 - 122678785 I a score=1358383.000000 s hg38.chr19_GL949753v2_alt 682030 422 + 796479 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCGTGGCACAGCAGGAACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCACTCCTCCCTTGATTGTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCACCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC s panTro4.chr19 59884713 410 + 63644993 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGCAGGA------------GACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTGATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTTCGGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTATCTGATCACGACCTTCTCCCTGGCACACGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGTAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGATGAAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806566 422 + 60714840 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTTGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAGCTCCCACGTGGGACAAGATGGTGTCTTCTGCGCAGATGGGCTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTTTCTGATCACGACCGCCTCCCTGGCACATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTGACAGCTACTGGGTGGAGATGGCGAGCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTCAGAGAGCAAAGGATGAACTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103323717 422 - 106955855 tggGAGTTTGTTCTTGAAGAAGCAGGGTAGATGGTGA--GTGTCCTCGTTCATGGCACAGTGGGGACTGGCATTTGAGACAGGAGTGCTAATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCACAGCTCCCACGTGGGACAAGATGGTGTCTCCGGCGCCGATGGGCTTCAACCTGCCGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGTTGAGCAAGTTCAAGTCTCTGATCACGACCGTCTCCCTGGCAAATGAGCTCCAGAAGATCCCCCACAAGGAGGTAGACAAAGCTGATAGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGTCACAGCTACTGGGTGGAGATGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAATGGATCTGTCTGAGAGTGCAAAGGACGAACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624328 421 + 64156825 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55764801 421 + 59248254 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTTCCCTTGTTCATGGCACCGAGGGGACTGGCA-CTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------CTCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCACTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCATCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870072 420 + 51301725 tgggagtttGTTCTTGAAGAAGCAGGGTACTGTGAGG--GTGCCCTTGTTCATGGCACAGAGGGGACTGGCA-TTGAGACAGAAGTGCTGATCACCATCCCTCTCCGTTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCGAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCTTGGGAAATGAAGTCCAGAAGATCCCCCAGAACGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTG-AAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGACGAACTC i papAnu2.chr19 C 0 M 192 s chlSab2.chr6 47578251 421 + 50890351 tggGAGTTTGTTCTTGAAGAAGCAGGGTAATGTGAGA--GTGCCCTTGTTCATGGCACTGAGGGGACTGGCA-TTGAGACAGGAGTGCTGATCACCATCCCTCTCCATTCCTCCCTTAATTCTC---------------ATCAGAACTCCCACGTGGGACAAGATGGTGTCTTCGACCCAGGTGAACTTCAACCTGCAGGCTCTCCTGGAGCAGCTCAGCCAGGATGAGCTGAGCAAGTTCAAGTCTCTGCTCAGGACAGTCTCCCTGGGAAATGAGGTCCAGAAGATCCCCCAGAAGGAGGTAGACGAGGCGGATGGGAAGCAACTGGCGGAAATCCTCATCAGCCATTGTCACAGCTACTGGACGGAGTTGGCGACCATCCAGGTCTTTGAAAAGATGCACCGAGTGGATCTGTCTGAGAGAGCAAAGGATGAACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45933732 408 + 49145316 tggGAATTTGTTCTTGAAGAAGCAGGGTAGATGGTGACTGTATGCTTGTCCATGGCACAGAGGGGACTGGCT-GTGAGACAGGGGTGCTGAC---------------GTCCTCCCTTCATTCTC---------------ACTGGAGCTCCCAAGTGGGACGAGATGGTGTCTTCTGTGCCACTGGACTTCAACCTGCAGGCTCTTCTGGAGCAGCTCAGCCAGGATGAGTTGAGCCAGTTCAAGTCTCTGATCAGGACCATCACCCTGGGAAATGAGCTACAGAAGATCCCCCAAACAGAGGTAGACGAGGCTGATGGGAAGCAACTGGCAGAAATCCTCACCAGCCATTGCCCCAGCTACTGGATGGAGACGGCCACCATCCAGGTCTTTGAAAAGATGCACCGGGTGGATCTGTCTGAGAGAGTGAAGGATGAACTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041264 437 - 122678785 TGGGAGTTGGTTCCTAAAGCAGCAGGTTGGGCAGTGATAATTGCCCAGTTCTTGGCACAGAGGCAACTGTCATTTGAAGTAGGAATACTGAT--TCGCTCTCTTTCATTTCTTCCCTTATTCTTCTTTAATGCCCAAAGCTCAGATCTCTCATGTAGAACAAGATGGAACCTTCTGCACAGCTGGGTTTCAACCTGCAGCCCCTTCTAGAACAGTTTGCCCAGGATGAGCTGAGCCAGTTCAAGTCTCTGTTGAGGCCCCTTTCCCTACAAGATGAATTACAGCACATCCCTGCGACAGAGGTAGAGGAGGCCGATGGGAAGCAGCTGGCAGAAATTCTTATCAACCACTGCCCCAGCCACTGGGTAGAGATGGTGACCATCCAGATTTTTGACAAGATGAACCGAACCGATCTGTCTGAGAGAGCAAAGGATGAGCTC i canFam3.chr1 I 5018 C 0 a score=167046.000000 s hg38.chr19_GL949753v2_alt 682452 65 + 796479 AGAGGTGAGTGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT s panTro4.chr19 59885123 65 + 63644993 AGAGGTGAGCGGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56806988 65 + 60714840 AGAGGTGAGTGGAAATCGGTCTACACTGTGTCCTAGGAGGAAGCAGGCGTCCTCTCCAGGACTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324139 65 - 106955855 AGAGGTGAGTGGAAATCGGTCCACCCTGTGTCCTAGGAGGAAGCAGGTGTCCTCTCCAGGACTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624749 63 + 64156825 AGAGGTGAGCAGAAATCGGTCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765222 63 + 59248254 AGAGGTGAGCAGAAATCGATCCGCACTGTGTCCTAGGAGGAAGCAGGCGACCTCTCCAGGACT-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578672 63 + 50890351 AGAGGTGAGCAGAAATCGGTCCACACTGTGTCCTAGGAGGAAGCAGACGACCTCTCCAGGACT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934140 65 + 49145316 AGAGGTGAGCGGAACTCGGTCCACACTGTGTCTTAGGGGAAAGCAGAAGTCCTCTCCAGGATGTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041701 65 - 122678785 AGGGGTAAGTAGAAACAAGCCCACATGGTGTCCTAGGAGGAAGGAGGAGTAGCCTCCAGGGTTTT i canFam3.chr1 C 0 I 8 e papAnu2.chr19 47870492 192 + 51301725 M a score=23042.000000 s hg38.chr19_GL949753v2_alt 682517 13 + 796479 AGAAATTCAGAAg s panTro4.chr19 59885188 13 + 63644993 AGAAATTCAGAAg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807053 13 + 60714840 AGAAATTCAGAAg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324204 13 - 106955855 AGAAATTCAGAAg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624812 8 + 64156825 -----TTCAGAAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765285 8 + 59248254 -----TTCAGAAg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578735 8 + 50890351 -----TTCAGAAg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934205 13 + 49145316 AGGAATTCAGAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e papAnu2.chr19 47870492 192 + 51301725 M a score=83506.000000 s hg38.chr19_GL949753v2_alt 682530 46 + 796479 gccaggcgcgctggctcacgcctgtcgtcccagccctttgggaggc s panTro4.chr19 59885201 46 + 63644993 gccaggggcgctggctcatgcctgtcgtcccagcactttgggaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807066 46 + 60714840 gccaggcgtgctggctcacgcctgtcatcccagcactttgggaggc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324217 46 - 106955855 gccaggcacgctcgctcacgcctgtcatcccagcactttgggaggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624820 46 + 64156825 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55765293 46 + 59248254 gccaggcgcactggctgacgcctgtcatcccagcactttgggaggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578743 46 + 50890351 gccaggcgcactggctcacgcctgtcatcccagcactttgggaggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M a score=104210.000000 s hg38.chr19_GL949753v2_alt 682576 93 + 796479 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatggtgatgaaacagcatctctactaaaaatacaaaaattt s panTro4.chr19 59885247 90 + 63644993 tgaggcggttggaccacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaattc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807112 91 + 60714840 cgaggtggttggatcacctgagggtcaggagtttgagaccagccctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324263 90 - 106955855 cgaggcggttggatcacctgagggtcaggagtttgagaccag-cctgaccaacatgg---tgaaacagcatctctactaaaaatacaaaaatta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765339 89 + 59248254 caacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatga---tgaaaccgcatctctactaaaaatataaaaatta i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47578789 89 + 50890351 cgacttgggtggatcacctga-ggtcaggagtttgaaaccag-cctgaccaacatgg---tgaaaccgcatctctactaaaaatataaaaatta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e papAnu2.chr19 47870492 192 + 51301725 M e rheMac3.chr19 60624866 19 + 64156825 I a score=93606.000000 s hg38.chr19_GL949753v2_alt 682669 55 + 796479 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag s panTro4.chr19 59885337 55 + 63644993 gctggacgtggtggcagacacctgtaatcccagctactccgggaggctgaggcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807203 54 + 60714840 gctggttgtggtggcagacacctgtaatccccgctact-cgggaggctgaggcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324353 54 - 106955855 gctgggcgtggtggcagacacctgtaatcccagctact-tgggaggcggaggcag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55765428 54 + 59248254 gccaagcgtggtggcagacacctgtaatcccagctact-cgggaggctgaggcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870686 54 + 51301725 gccgagcgtggtggcagacacatgtaatcccagctact-cgggaggctgaggcag i papAnu2.chr19 M 192 C 0 s chlSab2.chr6 47578878 54 + 50890351 gccgggcgtggtggcagacacctgtaatcccagctact-caggaggctgaggcag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C e rheMac3.chr19 60624866 19 + 64156825 I a score=199493.000000 s hg38.chr19_GL949753v2_alt 682724 103 + 796479 gagaatcacttaaatctaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctc--aaaaaaaaaa s panTro4.chr19 59885392 105 + 63644993 gagaatcacttaaatccaggaggcgggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattctgtctcaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807257 101 + 60714840 gagaatcacttaaatccaggaggcaggggttgctatgagccgagatcacgccattgcaccccagcctgggcaacaagagcaaaaattctgtctc-----aaaaaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324407 102 - 106955855 gagaatcacttaaacccaggaggcgggggttgctatgagctgagatcacgccattgcaccccagcctgggcaacaagagc-aaaattccatctc---aaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624885 96 + 64156825 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gagc-aaaactcggtctc-------aaaaa i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55765482 96 + 59248254 gagaatcccttgaacccaggaggtggaggttgcagtgagccgagatcacgccattgcactccagcctgggcaac--gggc-aaaactcggtctc-------aaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870740 96 + 51301725 gaggatcccttgaacctgggaggcggaggttgctgtgaaccaagatcacgccactgcactccagcctgggcaac--gagc-aaaactccgtctc-------aaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47578932 96 + 50890351 gagaatcccttgaacccaggagatggaggttgctgtgagctgagatcacgccactgtactctagcctgggcaac--gagc-aaaacttggtctc-------aaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041766 8 - 122678785 I e calJac3.chr22 45934218 0 + 49145316 C a score=12245.000000 s hg38.chr19_GL949753v2_alt 682827 5 + 796479 agaaa s panTro4.chr19 59885497 5 + 63644993 agaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807358 5 + 60714840 aaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324509 5 - 106955855 aaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624981 5 + 64156825 agaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765578 5 + 59248254 agaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870836 5 + 51301725 agaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579028 5 + 50890351 agaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20041774 5 - 122678785 AGGCA i canFam3.chr1 I 8 C 0 e calJac3.chr22 45934218 0 + 49145316 C a score=258319.000000 s hg38.chr19_GL949753v2_alt 682832 81 + 796479 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAATGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC s panTro4.chr19 59885502 81 + 63644993 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACGCAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807363 81 + 60714840 TGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCTTCATAAACCCTGGTGTCTGTCCTGGTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324514 81 - 106955855 CGGCATTGAGGCTTGGAGAGGGACTGCTTGTTCTGAACACAGGTGCTGGATCGTCATAAACCCTGGTGTCTGTCCTGGTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60624986 81 + 64156825 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765583 81 + 59248254 TAGCATTGAGGCTTAGAGAGGGACTGCTTGTTCTGAATACAGGTGCTAGATCTTCATCAACTCTGGTGGCTGTCCTGGTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870841 80 + 51301725 tggcaTTGAGGC-TAGAGAGGGACGGCTTGTTCTGAACGCAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579033 81 + 50890351 TGGCATTGAGGCTTAGAGAGGGACTGCTTGTTCGTAACACAGGTGCTAGATCTTCATCAACTCTGGTGTCTGTCCTGGTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45934218 81 + 49145316 TGGCATTAAGGCTTAGCGAGAGCCTGCCTGTCCTGAACACAGATGCCAGATCTTCATAAACTCTGATGTCTGTCCTGGTCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041779 71 - 122678785 TAACATTGAACCCTGAAGAGG--CCACCTGTCCTGAACCCAAATGCTAGACCTTCATAAAGTCTAGTGG-TGTC------- i canFam3.chr1 C 0 C 0 a score=2044.000000 s hg38.chr19_GL949753v2_alt 682913 8 + 796479 TTATTTTC s chlSab2.chr6 47579114 8 + 50890351 TTATTTTC i chlSab2.chr6 C 0 I 6 s calJac3.chr22 45934299 8 + 49145316 TTACTATC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20041850 8 - 122678785 TTCCATTC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=2198.000000 s hg38.chr19_GL949753v2_alt 682921 22 + 796479 TACCTACttctttttttttttt s calJac3.chr22 45934307 22 + 49145316 TACCTAttttttgttttgtttt i calJac3.chr22 C 0 I 796 s canFam3.chr1 20041858 22 - 122678785 TAGCTATTTCTACTCTGTCCTG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56807444 0 + 60714840 C e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=227.000000 s hg38.chr19_GL949753v2_alt 682943 7 + 796479 tttttgt s canFam3.chr1 20041880 7 - 122678785 GTATTGT i canFam3.chr1 C 0 I 933 e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 682950 899 + 796479 ccttttatttttttattttttattttattattAttattttttttattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccaatgctatccctcccccctccccccaccccaccacagtccccagagtgtgatgttccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgtgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcattgtattccatggtatatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaataatgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcatttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatccccacaccgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaactggtgtgagatgatatctcatagtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtcgttcgcccactttttgatggggttgtttgtttttttcttgtaaa e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56807444 0 + 60714840 C e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324595 0 - 106955855 C e chlSab2.chr6 47579122 6 + 50890351 I e papAnu2.chr19 47870921 0 + 51301725 C e macFas5.chr19 55765664 0 + 59248254 C e rheMac3.chr19 60625067 0 + 64156825 C e panTro4.chr19 59885583 0 + 63644993 C a score=23180.000000 s hg38.chr19_GL949753v2_alt 683849 14 + 796479 ttATTTTCTACCTA s panTro4.chr19 59885583 14 + 63644993 TTATTTTCTACCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807444 14 + 60714840 TTATTTTCTACCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324595 14 - 106955855 TTATTTTCTACCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60625067 14 + 64156825 TTATTTTCAACCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765664 14 + 59248254 TTATTTTCGACCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870921 14 + 51301725 TTATTTTCGACCTG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e chlSab2.chr6 47579122 6 + 50890351 I a score=162032.000000 s hg38.chr19_GL949753v2_alt 683863 72 + 796479 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT s panTro4.chr19 59885597 72 + 63644993 TTTCTATCGCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807458 72 + 60714840 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGATTTAACCAATCCTAGATCAAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103324609 72 - 106955855 TTTCTATCCCTTTCAGGTATCGTACAGTTGGCCTAACATATCTGTGGACTTAACTAATCCTAGATCAAAAAT i nomLeu3.chr10 C 0 M 692 s rheMac3.chr19 60625081 72 + 64156825 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765678 72 + 59248254 TTTCTATCCCTTTCAGGGATCATACCGTTGGCCTGACATATCTGTGGATTTAACCAATCCCAGATCAAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47870935 72 + 51301725 TTTCTATCCCTTTCAGGGATCGTACCGTTGGCCTGACATATCTGTGGATTTATACAATCCCAGATCAAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579128 70 + 50890351 TTTCTGTCCCTTTCAGGGATCATACCATTGGCCTGATATATC--TGGATTTCACCAATCCCAGATCAAAAAT i chlSab2.chr6 I 6 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=343871.000000 s hg38.chr19_GL949753v2_alt 683935 225 + 796479 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACtcttcttgagagaggatctcactctgtcacccaggctggaatttagcagcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccatgcctggctga----tttt s panTro4.chr19 59885669 225 + 63644993 AATGGGGGCAAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACtcttcttgagagaggatctcactctgtcacccaggctggaatttagcggcacgatctcggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcggcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807530 225 + 60714840 AATGGGGGCGAAGACAATTAAAAATAACAATACAATAAAATGCACATGAACTATGGTTATTTAACTCttcttgagagaggatctcactctgtcgcccaggctggaatttagtggcacgatctcggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccgggattacaagcatgtcccaccacgcctggctga----tttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625153 213 + 64156825 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAAATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765750 213 + 59248254 AATGGGGGCAAAGACAATTAAAAAT-----TACAATAAGATGCACATGAACTGTGGttattt---ctctcttgagagaggatctcgctctgtcacccaggctggggtgcagtggcatgatctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagccagaattacaagcacgtcccaccatgcctggctga-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871007 213 + 51301725 AATGGGCGCAAAGACAATTAAAAAT-----GACCATAAAATGCACATGAACTGTGGTCATTT---CTCTCTTGagagaggatcttgctctgtcacccaggctggggtgcagtggcatgatctcagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagccaggattacaggcacgtcccaccacgcctggctga-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579198 186 + 50890351 AATGGGGGCAAAGACAGTTAAAAAT-----TACAATAAAATGCACATGAACTGTGGTTATTT---CTCTCTTGAGAGAGGATCTCGCTCTGTCACCcag-------------------------------tgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccgagtagccagaattacaggcacgtcccaccatgcctggctgatttt---- i chlSab2.chr6 C 0 I 338 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=1890.000000 s hg38.chr19_GL949753v2_alt 684160 13 + 796479 ttttttttttttt- s panTro4.chr19 59885894 13 + 63644993 ttttttttttttt- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807755 13 + 60714840 ttttttttttttt- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625366 5 + 64156825 ---------tttta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765963 5 + 59248254 ---------tttta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871220 5 + 51301725 ---------tttta i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M e chlSab2.chr6 47579384 338 + 50890351 I a score=189888.000000 s hg38.chr19_GL949753v2_alt 684173 114 + 796479 ttt-------gtattctaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag s panTro4.chr19 59885907 111 + 63644993 ----------gtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcgtgacctcatgatctgcccgcctcggcctcccaaagtgttgggattacaggcgtgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807768 121 + 60714840 tttttttttggtattttaaatagagatggggtttcaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccacctcggcatcccaaagtgttgggattacaggcgtgag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625371 112 + 64156825 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgacattacaggcgtgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55765968 112 + 59248254 ttt-------gtgttttaaatacagatggggtttcaccatgttagccaggatagtctc--tgtcctgacctcgtgatctgcctactttggcctcccaaaatgttgagattacaggcgtgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871225 114 + 51301725 ttt-------gtattttaaatagagatggggttttaccatgttagccaggatagtctcgatgtcctgacctcgtgatctgcccactttggcctcccaaaatgttgggattacaggcgtgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579722 112 + 50890351 ttt-------gtgttttaaatagagattgagtttcaccatgttagccaggatagtctc--tatcctgacctcgtgatctgcccgctttggcctcccaaaatgttgagatgacaggcgtgag i chlSab2.chr6 I 338 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103324681 692 - 106955855 M a score=578072.000000 s hg38.chr19_GL949753v2_alt 684287 272 + 796479 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ccccctgggttcaagtgtttctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg s panTro4.chr19 59886018 272 + 63644993 ccaccgcacccagccAGCAAGTGCATTTAGAACTACTCT--ACTTTCTACCCCATAACt----------ttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtgcagcagcacaatctcagcttattgcaactcccg-ctccctgggttcaagcgattctcctgcatcagcctcttgaatagctaggattatacaggcacctgccactgagcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgttggccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56807889 283 + 60714840 ccaccgcacccagccAGCAAGTGCATTTAAAACAACTCT--ACTTTCTACCCCATAACtttttttacacttt--------ttttttgtttgtttgagacaagtctcactctgtcacccaggatggagtacagtggcacaatctcagcttattgcaactcccacccccccgggttcaagcgattctcctgcatcagcctcttgaatagctagggttatacaggcacctgccactgcgcctggctaaattttgtattttaata-------------gagatggggtttcacta-tgtcggccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325373 294 - 106955855 CCACTGCACCCAGCTAGCAAGTGCATTTAAAACAACTCTAAACTTTCTACCCCATAACt----------tttttttacgcttttttttttgtttgagacaagtctcactctgtcgcccaggatggagtgcagtggcacaatctcagcttattgcaactcccg-ccccccgggttcaagcgattctcctgcatcagcctcttgagtagctgggattatacaggcacctgccactgcgcctggctaaattttgtttttttgtgtttttttttttttgaga--gagtttcactcttgttgcccaggctgg i nomLeu3.chr10 M 692 I 48 s rheMac3.chr19 60625483 271 + 64156825 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTCTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtacaggatggagtgcagtggcgcaatctcagttca--------tctg-ccccccgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766080 271 + 59248254 ccactgcacccagccAGCTAGTGCATTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTTACA-Ctttttgtttgtttgagacgagtctcactctgtcgtgcaggatggagtgcagtggcacaatctcagttca--------tctg-ccccctgggttccagcgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871339 279 + 51301725 ccaccgcacccagccagctaGTGCATTTAAAACAACTCC--ACTTTCTACCCCATAAct----------ttattttaca-ctttttgtttgtttgaaacaagtctcactctgtcatgcaggatggagtgcggtggcgcaatctcagttcattgcaacctcca-ccccccgggttcaagcgattctcctgcatcggcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaaattttgtattttaata-------------gagacaggatttcacta-tgttggacaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47579834 278 + 50890351 ccaccgcgcccagccAGCTAGTGCGTTTAAAACAACTCT--ACTTTGTACCCCACAACT----------TTATTTCACA-C-TTTGGtttgttggagacgagtctcactctgtcaagcaggatggagtgcagtggcgcaatctcagttcgttgcatcctccg-ccccccgggttcaagtgattctcctgcatcagcctcctgagtagctgggattatacaggcacctgccactgtgcctggctaagttttgtattttaata-------------gagacgggatttcacta-tgttggacaggctgg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=27078.000000 s hg38.chr19_GL949753v2_alt 684559 15 + 796479 tcttgaactcctgac s panTro4.chr19 59886290 15 + 63644993 tcttgaactcctgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808172 15 + 60714840 tcttgaaatcctgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625754 15 + 64156825 tcttgaactcctgat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766351 15 + 59248254 tcttgaactcctgat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871618 15 + 51301725 tcttgaactcctgat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580112 15 + 50890351 tcttgaactcctgat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325667 48 - 106955855 I a score=351887.000000 s hg38.chr19_GL949753v2_alt 684574 187 + 796479 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccgccatgcccagcTACACtttttttt------gaaacggggtctcgttttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctaccactatggcctccca s panTro4.chr19 59886305 187 + 63644993 tatgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccaccatgcccagcTACACtttttttt------gaaacggggtctcattttcttgctcaggctggagtacaatggggcaatcacagctcactgcagccttgacctcccagacttgagcaatcctgccactatggcctccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808187 187 + 60714840 cacgtgatcaacccgcctcagcctcccaatgtgctggaattacaggtgtgagccactatgcccagctACACtttttttt------gaaacggggtctcattttcttcctcaggctggagtacaatggggcaatcacagctcactgcagcctcgacctcccagacttgagcaatcctgccactatagcctccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325715 162 - 106955855 caagcgattctcctgcctcagcctccctagtagctgggattataggcatgtgccaccacgcctggctaagtttgtatttttagtagagacggtgtttctccatgttggtcaggctg-------------------------------atctcgaactcccgacctcaggtgatccgcctgcctcggcctccca i nomLeu3.chr10 I 48 I 45 s rheMac3.chr19 60625769 185 + 64156825 tgtgtgatcaaaccgcctcagcctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgccttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766366 185 + 59248254 tgcgtgatcaaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cCTGGCTATACTGtttttt------gaaacagggtctcgctttgtggctcaggctggagtacagtggggcaatcatagctcattgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871633 185 + 51301725 tgcGTGATCAaaccgcctcagtctcccaatgtgttggaattacaggcgtgagccgcca--cctggctatactttttttt------gaaacggggtctcactttgtggctcaggctggagtacactggggcaatcacagctcactgcagcctcgacctcccagactcgaGCAATCCTGCCACCATAGCCTCCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580127 185 + 50890351 tgcgtgatcaaaccgcctcagtctcccagtgtgttggaattacaggcgtgagccacca--cCTGGCTATACTGtttttt------gaaacggggtctcgctttgtggctcaggctggagtacagtggggcaatcacagctcactgcagcctcgacctcccagactcgagcaatcctgccactatagcctccca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=29624.000000 s hg38.chr19_GL949753v2_alt 684761 26 + 796479 ccacacctcgctcattcttgtatata s panTro4.chr19 59886492 26 + 63644993 ccacacctcgctcattcttgtatata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808374 26 + 60714840 ctacacctcactgattcttgtatttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60625954 22 + 64156825 ccacacctcgctgatctttgta---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766551 22 + 59248254 ccacacctcgctgatctttgta---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871818 23 + 51301725 CCACGCCTCgctgatctttgtat--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580312 23 + 50890351 ccacacctcgctgatctttgtat--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103325877 45 - 106955855 I a score=267396.000000 s hg38.chr19_GL949753v2_alt 684787 133 + 796479 tatatattttt-----gtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA s panTro4.chr19 59886518 135 + 63644993 ttttttttttt---ttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtgggctcaaccgatcctcctgccttggcttcccacagtcctgggatcagaaacatgagccacagtgcctggccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808400 138 + 60714840 ttttttttttttttttgtagagatagggtttcaccatgttgcccaggctggtctcgaacttctgtaggctcaaccaatcctcctgccttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103325922 129 - 106955855 tttgtatttta-----atagagatggggtttcattatgttggccaggctggtcttgaactcctgaccgtgtgatcaa----cccgcctcggcttcccaatgtgctggaattacaggtgtgagccaccatgtccagcTA i nomLeu3.chr10 I 45 I 1552 s rheMac3.chr19 60625976 129 + 64156825 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766573 129 + 59248254 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871841 129 + 51301725 ----ttttttt-----gtggagacagggtttcaccatgttgctgaggctggtctgaaactcctgtgGGCTCAGCtaatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580335 129 + 50890351 ----ttttttt-----gtagagacagggtttcaccatgttgccgaggctggtctgaaactcctgtgggctcagctgatcctcctgacttggcttcccaaagtcctgggatcagaaacatgagccacagtgcctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I a score=254955.000000 s hg38.chr19_GL949753v2_alt 684920 147 + 796479 Gtgcagctttatttacagtaaccaagatatagagtcagtctaagtgaccatcagtggatgaataaaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAAAAGGAAACATGGTA s panTro4.chr19 59886653 147 + 63644993 Gtgcagctttatttacagtaaccaagatacagagtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcccgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagccttaAaaaggaaacatggta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808538 147 + 60714840 Gtgcagctttatttacagtaaccaagatatagggtcagtctaagtgaccatcagtggatgaatagaaaat---gtgcctgttgggtaccctgcctactgcctgggttatgagattgttggg----accccaagcctcaAaaaggaaacatggta i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626105 150 + 64156825 GTTcagctttatttactgttaccaagatacagagtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttacgagattattggg----accccaagcctcaAaaaggaaacatggta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766702 148 + 59248254 Gtgcagccttatttacagttaccaagatac--agtcagtctaagtgaccatcactggataaatggaaaatgtggtgcccgttgggtacactgcctactgcctgggttatgagattattggg----accccaagcctcaAaaaggaaacatggta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47871970 148 + 51301725 gtgCAGCTTTATTTACAGTTACCAAGATAG--AGTCAGTCTAAGTGACCATCACTGGATGAATGGAAAATGTGGTGCCTGTTGGGTACACTGCCTACTGCCTGGGTTATGAGATTATTGGG----ACCCCAAGcctcaaaaaggaaatatggta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580464 154 + 50890351 GtgcagctttatttacagttaccaagatacagagtcagtctaagtaaccatcactggatgaatggaaaatgtggtgcctgttgggtacactgcctactgcctgggttatgagattattgggacccaccccaagcctcaAAAAGGAAACATGGTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45934329 796 + 49145316 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=534334.000000 s hg38.chr19_GL949753v2_alt 685067 252 + 796479 ggccgggcacagtggctcacgcctgtaatcacagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtcccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcagaggttgcagtgagccaagatcgtgccactgcgct s panTro4.chr19 59886800 250 + 63644993 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccgtgtctctactaaaaata-taaaaaaatcagccgggcgtggtggcacactcctgtagtgccagctacttgggaggctgaggc-aggaggattgcttgaaccagagagtcag--gttgcagtgagccaagatcgtgccaatgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808685 254 + 60714840 ggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacttgaggccaggagtttgagaccagtcaggccaatgtggtgaaaccctgtctctactaaaaatatttaaaaaattagccgggtgtggtggcacactcctgtagtctcagctacttgggaggctgaggcaaggaggattgcttgaaccagggagtcagaggttgcagtgagccaagatcgtgccactgcact i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60626255 252 + 64156825 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgagga-aagaggagtgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55766850 252 + 59248254 ggctgggcacggtggctcacgcctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagagcagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaggc-aagaggatcgctggaaccagggagttggaggttgcagtgagctgagattgtaccatttcact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872118 252 + 51301725 ggctgggcacggtggctcacacctgtaatcccatcactttaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaata-caaaaaaattatccaggcgtggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcacttgaaccagagacttggaggttgcagtgagctgagactgcaccattgcact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580618 252 + 50890351 ggctggccacggtggctcaagcctgcaatcccatcacttcaggagaccaaggcgggtggatcacttgaggccaggagtttgagaccagcctggccaacgtggggaaaccctgtctctactaaaaata-caaaaaaattagccaggcatggtggtgggcacctgtagtcccagctacttgggaggctgaggc-aggaggatcgctggaaccagggagttggaggttgcagtgagctgagattgcaccgtttcact i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935125 248 + 49145316 ggccaggcgcagtagctcacgcctgtaaccccagcactctgggaggccgaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaata-c--aaaaattagctgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggc-aggagaatcacttgaacccgggaggcggaggctacagtgagctgagatcgtgtaactgcact i calJac3.chr22 I 796 C 0 e canFam3.chr1 20041887 933 - 122678785 I e nomLeu3.chr10 103326051 1552 - 106955855 I a score=112967.000000 s hg38.chr19_GL949753v2_alt 685319 42 + 796479 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa s panTro4.chr19 59887050 42 + 63644993 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808939 42 + 60714840 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327603 42 - 106955855 ccagcctgggtgac--agcaagactccatctc---aaaaaaaaaaaa i nomLeu3.chr10 I 1552 C 0 s rheMac3.chr19 60626507 45 + 64156825 ccagcctgtgtgacggagcaagactcccactc--aaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767102 44 + 59248254 ccagcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872370 42 + 51301725 --agcctgggtgacggagcaagactccctctc---aaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580870 47 + 50890351 ccagcctgggagacagagcgagactccctctcaaaaaaaaaaaaaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935373 44 + 49145316 ccagccttaatgacggagcaagactccatctc---aaaaaaaaaaaa i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=817.000000 s hg38.chr19_GL949753v2_alt 685361 5 + 796479 caaa--c s panTro4.chr19 59887092 4 + 63644993 aaaa--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808981 5 + 60714840 aaaa--g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327645 7 - 106955855 aaaaaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626552 4 + 64156825 aaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767146 4 + 59248254 aaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872412 4 + 51301725 aaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580917 4 + 50890351 aaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935417 0 + 49145316 C a score=139229.000000 s hg38.chr19_GL949753v2_alt 685366 63 + 796479 aaaCATGGTATTAATTACACAAT-GGAATACTCCTCAACCTTAAGGAACTCCTATCTTTTTATT s panTro4.chr19 59887096 61 + 63644993 --acatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56808986 63 + 60714840 aaacatggtattaattacacaat-ggaatactcctcaaccttaaggaaatcctatcttttTATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327652 63 - 106955855 aAACATGGTATTAATTACATAAT-GGAATACTCCTCAAACTTAAGGAAATCCTATCGTTTTATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626556 56 + 64156825 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767150 56 + 59248254 ----ttggtattaattacacaat-ggaatactcttcaaccttaaggaaatcctgtcttc---tg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872416 56 + 51301725 ----ttgatactaattacacaat-ggaatactcttcaaCCTTAAGGAAATcctctcttc---tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580921 57 + 50890351 ----TTGGTATTAATTACACAATGGGAATACTCTTCAACCTTAAGGAAATCCTGTCTTC---TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 3210275 63 - 49145316 AAACATGGTATTATTTACACCAT-GAAATACTCTTCGATCTTAAGGAAATCCTATTCAAAAATA i calJac3.chr22 T 27878 n 0 e canFam3.chr1 20041887 933 - 122678785 I a score=55788.000000 s hg38.chr19_GL949753v2_alt 685429 19 + 796479 TAAAAATTGCCAGTTTTAT s panTro4.chr19 59887157 19 + 63644993 TAAAAATTGCCAGTTTTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809049 19 + 60714840 TAAAAATTGCCAGTTTTAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327715 19 - 106955855 TAACAATTGCCAGTTTTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60626612 19 + 64156825 taaaaaTTGCCAGTTTTAT i rheMac3.chr19 C 0 I 394 s macFas5.chr19 55767206 19 + 59248254 taaaaaTTGCCAGTTTTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872472 19 + 51301725 taaaaattgccAGTTTTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580978 19 + 50890351 TAAAAATTGACAGTTTTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935417 19 + 49145316 aaaaaaTTGCCGTTTTTAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=60650.000000 s hg38.chr19_GL949753v2_alt 685448 28 + 796479 TTCAGCTAGAGATCACTTTTTAGCATAA s panTro4.chr19 59887176 28 + 63644993 TTCAGTTAGAGATCACTTTTTAGCATAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809068 28 + 60714840 TTCAGCTAGAAATCACTTTTTAACATAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103327734 28 - 106955855 TTCAGCTAGAGATCACTTTTTAGCATAA i nomLeu3.chr10 C 0 I 304 s macFas5.chr19 55767225 28 + 59248254 TTCAGTTGGAGATCACTTCTTAGCATAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872491 28 + 51301725 TTCAGTTGGAGATCACTTCTTAGCATAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47580997 28 + 50890351 TTCAGTTGGAGATCACCTCTTAGCATAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935436 28 + 49145316 TCCAGGTAGAGATCACTCCTTAGCGTAA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=37777.000000 s hg38.chr19_GL949753v2_alt 685476 17 + 796479 TGTTTCCTGTCTTTAAC s panTro4.chr19 59887204 17 + 63644993 TGTTTCCTGTCTTTAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809096 17 + 60714840 TGTTTCCTGTCTTTAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328066 17 - 106955855 TGTTTCCTGTCTTTAAC i nomLeu3.chr10 I 304 C 0 s macFas5.chr19 55767253 17 + 59248254 TATTTCCTATCTTTAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872519 17 + 51301725 TATTTCCTATCTTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581025 17 + 50890351 TATTTTCTATCTTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935464 17 + 49145316 TGTTTCCTGTCTTTAAT i calJac3.chr22 C 0 I 9 e canFam3.chr1 20041887 933 - 122678785 I e rheMac3.chr19 60626631 394 + 64156825 I a score=23937.000000 s hg38.chr19_GL949753v2_alt 685493 13 + 796479 -AATGGGTGAGGGT s panTro4.chr19 59887221 13 + 63644993 -GATGGGTGAGGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809113 13 + 60714840 -GATGGGTGAGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328083 13 - 106955855 -GATGGATGAGGGt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767270 14 + 59248254 GGATGGGTGAGGGt i macFas5.chr19 C 0 I 314 s papAnu2.chr19 47872536 14 + 51301725 GGATGGgtgagggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581042 14 + 50890351 GGATGGGTGAGGGt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=1903.000000 s hg38.chr19_GL949753v2_alt 685506 18 + 796479 -------tttttttttttttttttt s panTro4.chr19 59887234 12 + 63644993 -------tttttttttttt------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809126 14 + 60714840 -------TTTTTTGTTGTT----GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328096 12 - 106955855 -------ttgtttttttgg------ i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767598 18 + 59248254 ttttttcctttttttttt------- i macFas5.chr19 I 314 C 0 s papAnu2.chr19 47872550 18 + 51301725 ttgttttttttttttttt------- i papAnu2.chr19 C 0 I 266 s chlSab2.chr6 47581056 17 + 50890351 -ttttggttttttttttt------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e rheMac3.chr19 60626631 394 + 64156825 I a score=2251.000000 s hg38.chr19_GL949753v2_alt 685524 13 + 796479 ggtttggtttgga s panTro4.chr19 59887246 8 + 63644993 -----ggtttgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809140 13 + 60714840 TGTTTGGTTTGGA i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e nomLeu3.chr10 103328108 0 - 106955855 C e chlSab2.chr6 47581073 0 + 50890351 C e papAnu2.chr19 47872568 266 + 51301725 I e macFas5.chr19 55767616 0 + 59248254 C e rheMac3.chr19 60626631 394 + 64156825 I a score=3273.000000 s hg38.chr19_GL949753v2_alt 685537 12 + 796479 ttttggtttt--gc s panTro4.chr19 59887254 12 + 63644993 ttttggtttt--gc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809153 12 + 60714840 TTTTGGTTTT--AG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103328108 11 - 106955855 -tttggtttt--gg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55767616 6 + 59248254 ------tttttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872834 10 + 51301725 ttttggtttt---- i papAnu2.chr19 I 266 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I e chlSab2.chr6 47581073 0 + 50890351 C e rheMac3.chr19 60626631 394 + 64156825 I a score=50103.000000 s hg38.chr19_GL949753v2_alt 685549 22 + 796479 ttttgagtcgaagtttcactct s panTro4.chr19 59887266 22 + 63644993 ttttgagtcgaagtttcactct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809165 22 + 60714840 TTTTGAGACAAAGTTTCACTCT i ponAbe2.chr19 C 0 I 756 s nomLeu3.chr10 103328119 22 - 106955855 ttttgagacgaagtttcactct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627025 22 + 64156825 ttttgagacgaagtttcactct i rheMac3.chr19 I 394 C 0 s macFas5.chr19 55767622 22 + 59248254 ttttgagacgaagtttcactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872844 21 + 51301725 -tttgagacgaagtttcactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581073 18 + 50890351 ----gagacgaagtttcactct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45935481 9 + 49145316 I a score=449109.000000 s hg38.chr19_GL949753v2_alt 685571 264 + 796479 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctcccaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcccgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgctgggattacaggtgtgagcaaccatgcccggccA s panTro4.chr19 59887288 264 + 63644993 tgtctcccaggctagagtgcaatggcgcgatctcggctcactgtgacctcctcctctcaggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccatgcctgctaatttttgtattttagtagagacagggttttaccatgttgaccagactggtctcgaactcccgacctcaggt--------------gatctgcccacctcagcctcccagagtgttgggattacaggtgtgagcaaccatgcccggccA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328141 264 - 106955855 tgtcgcccaggctagagtagaatggcacagtctcggctcactgcgacctcctcctcccgggtttaagtgattctcctgcctcagcctccagagtagctgggattacaggcgcctaccaccacgcccgctaatttttgtattttagtagagacggggtttcaccatgttgaccagactggtctcgaactaccgacctcaggt--------------gatctgcccacctcggcctcccaaagtgttgggattacaggtgtgagcaaccacgccgggccG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627047 276 + 64156825 tgtcacccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767644 276 + 59248254 tgtcacccaggctagagtagaatgtcacagtctcggctcactgcaacctccgcctcccgggaaggagtggttctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47872865 276 + 51301725 tagcgcccaggctagagtagaatgtcacggtctcggctcactgcaacctccgcctcccgggagggagcgattctcctgcctcagcctcccaagcagctgggattacaggcgcctaccaccacgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccgatctcaggtgatctgcccacctcgatctgcccacctcggcctccc--agtgttgggattacaggcgtgagccaccatgcccagccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581091 276 + 50890351 tgtcacccaggctagagtagaatggcatggtctcggctcactgcaacctctgcctcccgggagggagtgattctcttgcctcagcctcccaagcagctgggattacaggcgcctaccaccatgctcgctaatttttgtattttagtagagatggggcttcaccatgtgggccagactgatctcaaactcccaatctcgggtgatctgctcacctcgatctgcccacctcagcctccc--agtgttgggattacaggcgtgagcaaccatgcccagccG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I e calJac3.chr22 45935481 9 + 49145316 I a score=132655.000000 s hg38.chr19_GL949753v2_alt 685835 62 + 796479 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC s panTro4.chr19 59887552 62 + 63644993 AGGGTTTTTAACTTTAGCTGACCTCCGGAGGTTACAAGTTTGAAAACGGCAGGAGGAAACCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103328405 59 - 106955855 AGGGTTTTTAACTCTAGCTGGCCTCCGGAGGTTACAAGTTTGAAAA---CAGGAGGAAACCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627323 62 + 64156825 AGGGGTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767920 62 + 59248254 AGGGTTTTTACCTCTAGCTGGCCTCCGGATGTTACAAGTTTGAAAATAGAAGGAGGAAACCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873141 62 + 51301725 agggTTTTTACCTCTAGCTGGCCTCCGGAGTTTACAAGTTTGAAAATAGGAGAAGAAAACCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581367 62 + 50890351 AGGGTTTTTACCTCTAGCTGGCCTCCAGAGGTTACAAGTTTGAAAATAGGAGGAGGAAACCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935490 62 + 49145316 AGGGTTTTTAAGTCTAGCTGGCCTCCAGAGGTCACAAATTGGAAAATAGCAGGAGAAAACCC i calJac3.chr22 I 9 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56809187 756 + 60714840 I a score=2305838.000000 s hg38.chr19_GL949753v2_alt 685897 872 + 796479 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATACAAATTTTCTTTCCATGCCAATAGCGCTCACACAGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGTAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccaagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagctgggca-tggtggtgtatgcctatagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaaaaaaaa------gaTGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT-------CCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCCTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- s panTro4.chr19 59887614 880 + 63644993 AGAGAGTTGTAAACTTACGAAGGTCTGGGCTC-TGAAAAAGATGCAAATTGTCTTTCCATGCCAATAGCGCTCACACGGACATGGTGAATGTTCCTGAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGAAAC---------AAGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTCATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCGGAAAAAAGGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggttaggagtctgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacgtgggaggcagaggttgcagtgagccaagattgtgc-----cactccagcctgggcaatagattgacactctgtctc--------------aaaaaaaaaaaaaaaagaTGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTTTTTTATGAAGGCAATAAAATCTTGAGCTTATGGTAAA-ATG-CAAAATTTT------TCCCCCCTTCTCCTTTTTCAGAAGCAGCCTTGAAATCGTTTAATAAAA-GGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTCGGGCCTTTGTTTT---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56809943 874 + 60714840 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTCTTAAAAAAAATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAGCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTCCAGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTGAGGC---TTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGCCTATTAAAAGATACAAGCagccgagcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggtgg--gcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaacttagccaggca-tggtggtgtatgcctgtagtcccagctactcaggaagctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgtgc-----cactccagcctgggcaacagagtgacactctgtctc--------------aaaa------------GATGCAAGCATTTTGAACTGGAAGGAGAT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATCTT---TTCTTTTATGAAGGCAATAAAATCTTGACCTTATGTTAAA-ATGCCAAAATTTTT-----TCCCCCCTTCTCCTTTTTCAGAAGCAGCTTTGAAATCGTTAAATAAAAGGGAAGCCTCTATCATTAGGTAAGTTACCTCATTTATAACTTTTATTCTTCATGCTGAGATTCTGGGGATCTCGGGCCTTTGTTTT---- i ponAbe2.chr19 I 756 C 0 s nomLeu3.chr10 103328464 873 - 106955855 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAAATTTTCTTTCCATGCCGATAGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGTAAGAAGTGTGGCAAGCACCACCCCCACAAAGTGACAC---------AGGGCAAGGATTCTTGGTATGCCCAGGGGAAGCAGTGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAGACTAAGCCGATTTTTCGGAAAAA-AGCTAAAAACTACAAAGAAGATTGTGCTAAGGCTCATTGAGTGCCTTGAGCCCAACTGCAGATCTA--AGAATGCTGGCTATTAAAAGATACAAGCAgccgagcgtggtggcttacgcctgtaatcccaacactttgggaggccaaggtgggcgcggatcacaaggtcaggagtttgagaccagcctggccaaaatggtgaaaccctatctctactaaaaatacaaaacttagccgggcattggtggtgtatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggtagcagtgagccaagatcgagc-----cactccagcctgggtgacagagtgacactctgtctc--------------aaaaaaaaaaaa----GATGCAAGCATTTTGAACTGGAAGGAGGT---AAGAGAAAGGAACAAGTGATCCAGTTCTAAGTGTCATC--------TTTTATGAAGGCAATAAAATCTTGAGCTTATGTT-AA-ATG-CAAAATTTT------TCCCCCCTT---CTTTTTCAGAAGCAGCTTTGAAATCGTTTAATAAAA-ACAAGCCTCTATCATTAGGTAAGTTACCTCATTTACAACTTTTATTCTTCATG-TGAGA-TCTGGGGA-CTTGGGCCTTTGTTTT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60627385 858 + 64156825 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctatctc---------------aaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACT--GAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCTCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAC-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATAACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55767982 861 + 59248254 AGAGAGTTGTAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCACCGGACTTTCTGTAAGAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGCTT-TTGGTGTGCCCAGGGGAAGCAGTGTTACGCCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAATCTTCTGGAAAAA-GGCT-AAAACTACAAAGAAGATTGTGCTAAGGC---TTGAGTGCGTTGATCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCAgccgggagcggtggctcatgcctgtaatcccagcattttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgtgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcacttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgacagagtgaga--ctatctc--------------aaaaaaaaaaaaaaaaGCTGCAAGCATTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCTC-------CCCCCCGTTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTATGACTTTTATTCTTCATG-TGAGA-TTTGAGGA-CTTGGGGCTTTGTTTT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47873203 880 + 51301725 AGAGAGTTGTAAACTTAAGAGGGTCGGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACATGGTGAATGTTCCTAAAACCCGCCAGACTTTCTGT--GAGGTGTGGCAAGCACCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTGTGCCTAGGGGAAGCAGTGTTATGGCAGGAAGCAGAGTGATTATGGTGGGCAGACTAAGCCAATTTTCTGGAAAAA-ggct-aaaactacaaagaagattGTGCTAAGGC---TCGAGTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAgcggccaggagcggtggctcatgcctgtaatcccagcactttgggaggccaaggtag--acggatcatgatgtcaggagtttgagaccagcctggccaaaatggtgaaaccccatctgtactaaaaatataaaacttagccaggca-tggtggtgcgtgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacagaggttgcagtaagccaagatcttgc-----cactccagcctgggtgacagagtgaga--ctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagatgcaagcaTTTTGAACTGGGAGGATAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGTGATAAAATCTTGAgtttatattaaa-atg-caaatctcccccccaccccccgttTTCCTTTTTCAGAGGCAGCTTTGaaatcatttaataaaa-acaagCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-CTTGGGGGTTTGTTTT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47581429 855 + 50890351 AGAGAGTTGGAAACTTACGAGGGTCTGGGCTC-TGAAAAAGATGCAGAGTTTCTTTCTGTGCCGATCGCGCTCACACAAACGTGGTGAATGTTCCTAAACCCCGCCGGACTTTCTGTAAGAAGTGTGGCAAGCGCCATCCCCACAGAGTGACAC---------AGGGCAAGGATT-TTGGTATGCCCAGGGGAAGCAGTGTTAGGGCAGGAAGCAGAGTGACTACGGTGGGCAGACTAAGCCAGTTTTCTGGAAAAA-GGCT-AAAACTACA---AAGATTGTGCTAAGGC---TC--GTGCGTTGAGCCTATCTGCAGATCTA--AGGATGCTGGC---TAAAAGATACAAGCggccaggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggtgg--acggatcacgaggtcaggagtttgagaccagcctggccaaaacggtgaaaccccatctgtactaaaaatacaaaacttagccacgca-tggtggtgcatgcctgtagtcccagctactcaggaggctgaggcagcagaatcgcttgaacctgggagacggaggttgcagtgagccaagatcttgc-----cactctagcctgggtgaca----gaga--ctgtctc--------------aaaaaaaaaaaaaaaaGATGCAAGCATTTTAAAATGGGAGGAGAT--------AAAAGACCAAGTGATCCAGTTCTAAGTGTTGTC--------TTTTATGAAGGCAATAAAATCTTGAGTTTATATTAAA-ATG-CAAATCCCCCC----CCCCCCATTTTCCTTTTTCAGAAGCAGCTTTGAAATCATTTAATAAAA-ACAAGCCTTTATCATTAGGTAAGTTA-CTCATTTACGACTTTTATTCTTCATG-TGAGA-TTTGGGGA-GTTGGGGCTTTGTTTT---- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45935552 906 + 49145316 AGAGAGTCGTACACTTACGAGGGGCTGGGCTC-TTAAAAAGATGCAGATTTTCTTTCCGGGCCAATAGTGCCCATGCAAACACAGTGAATGTTCCCAAAAGCCACCAGACTTTCTGTAAGAAGTGTGGCAAGCAGCAATCCCACGAAATGGCACAGTACGAGAAGGGCAGGGATTCTC--TATGCCCAGGGAAAGCGGTGTTACGACAGACAGCAGAGTGGCTATAGTGGGCAGCGTACGCCGATTTTCCGAAAAAA-GGCT-AAAAATACA---AAGACTGTGCTAAGGT---TTGGCTGCGTGGAGCCCCACTGCAGATCTAAGAGAATGCTGGCTGTTAAAAGATGCAAGCggccgggcgcggtggctcacgcctgtaatcccagcactttaggaggccgaggcgg--gtggatcgcgaggtcaggagttcaagaccagcctggccaagatgttgaaaccccgtctctactaaaaatacaaaaattagctgggcg-cggtggcatgtgcccgtaatcctacctactcaggaggctgaggcaggagaattgcctgaacctgggaggtggaggttacagtgagctgagattgtgccattgcactccagcctgggtgactgagtaagactcggtctc-------aaaaaaaaaaaaaaaaaaaaaaagaTGCAAGCATTTTCAACTGGGAGCAGGTAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTGAGTGTCATCTTTTATTTTATTATGAAGACAATAAAATCTTGCGTTTCTTTTAAACATG-TAAATTT--------CTCCCCCTTTTTCTTTTTCAGAAGCAGCTTTGAGATCATTTAATAAAA-ACAAGCCTCTACCATTAGGTAAATTACCTCATTGACAACTATTATTCTTCATG-TGAGG-TTTGGGGA-CTGAGGGCTGCTtttttttt i calJac3.chr22 C 0 I 2503 e canFam3.chr1 20041887 933 - 122678785 I a score=49894.000000 s hg38.chr19_GL949753v2_alt 686769 29 + 796479 AAGGAGAATG--TGCTGAGCACTAAGAATGC s panTro4.chr19 59888494 29 + 63644993 AAGGAGAATG--TGCTGAGCACTAAGAATGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810817 29 + 60714840 AAGGAGAATG--TGCCGAGCACTAAGAATGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329337 29 - 106955855 AAGGAGAATG--TGCTGAGCACTAAGAATGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628243 29 + 64156825 AAGAAGAGGC--TGCTGACTACTAAGAATGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768843 29 + 59248254 AAGAAGAGGC--TGCTGACTACTAAGAATGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874083 31 + 51301725 AAGAAGAGACTGTGCTGACTACTAAGAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582284 31 + 50890351 AAGAAGAGACAGTGCTGTCTACTAAGAATGT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45936458 2503 + 49145316 I a score=864378.000000 s hg38.chr19_GL949753v2_alt 686798 302 + 796479 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCTCGCAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGGTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctctacctcctgggttcaagcagttctcctgcctcagcctctagaatagctgggatta s panTro4.chr19 59888523 302 + 63644993 AAAGAAATGCCGGACTTAGCATCCCTGCTCCCAGGGCGGAGCTGGTCACACAGGTGCGTAGCAGTAAGACCTGGGAAGCTGAAACACGATCGCGTTTGTTGGAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-ttttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacttccacctcctgggttcaagcagttctcctgcctcagccttgggaatagctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56810846 301 + 60714840 AAAGAAATGCCGGACTTCGCATCCCTTCTCCCAGGGCGGACCTGGTCACGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGAAAATCTATAAATACATACAAAGCGGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC--tttcttttttgagatggaggcttgctctgtcacctaggctgaagtgcagtggtacgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329366 302 - 106955855 AAAGAAGTGCCGGACTTCGCACCCCTGCTTCCAGGGCGGAGCTGGTCATGCAGGTGCATAGCAGTAAGACCTGGGAAGCTGAAACACGATAGCGTTTGTTGGAAATCTATAAATACATACAAAGCAGGGAAGGGTAAGCTTGGCCTTTGAATCTGGATAAGCTAGAGAC-TTTGGttttttgagatggaggcttgctctgtcgcctaggctgaagtgcagtgatatgacctcggctgactgcaacctccacctcccgggttcaagcagttctcctgcttcagcctctggagtagctgggatta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60628272 300 + 64156825 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccggcttcaagcaattctcctgcctcagcctctggagtagctgggatta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55768872 300 + 59248254 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGCATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAAGTGGATAAGCTAGAGAC---ttcttttttgagatggagccttgctctgtcgcctaggctggagtgcagtggcacaatctcagctgactgcaacctccgcctcccagcttcaagcaattctcctgcctcagcctctggagtagctgggatta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874114 302 + 51301725 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGACGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGGTAGCATTTGTTGGAaatctataaatacatacaaagtgGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCtagagac-ttttcttttttgagatggagtcttgctctgtcgcctaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctctggagtagctgggatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582315 302 + 50890351 AAAGAAATGCCGGACTTCTCATCCCTGCTCCCAGGATGGAGCCGGTCACACAGGTGGGTAGCAGTAAGCCCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAATCTATAAATACATACAAAGTGGGGAAGGGTAAGCTTGGCCTTTGAAACTGGATAAGCTAGAGAC-ttttcttttttgagatggagtcttgctctgtcacctaggctaaagtgcagtggcacaatctcggctcactgcaacctccgcctcccgggttcaagcagttctcctgcctcagcctctggagtagctgggatta i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45938961 303 + 49145316 aaagaaaTCCCAGCGTTCTCATCCCTGCTCCCAGGGAGGAGCTGGTTATGCAGGTGGAGAGCAGTAAGACCTGGGAAGCTGAAACACGATAGTATTTGTTGGAAACTGGTACATACATACCCAGTAGGGAAGGATAAGCTTGGCCTTTCAATATGGATAAGCTAGAGACtttttcttttttgagatggagtctggctctgttgcctaggctggagtgcagtggtgcaatcatggttcactgcagccttgacctcccaggctcaggtgatcctcctgcctcagcctcccaaagtgctggggtca i calJac3.chr22 I 2503 I 1 e canFam3.chr1 20041887 933 - 122678785 I a score=301963.000000 s hg38.chr19_GL949753v2_alt 687100 136 + 796479 caggtacctgccaccaggcccggctaattttttgtggtgtt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagcgtcccaaaatgctgggatta s panTro4.chr19 59888825 135 + 63644993 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgatggccaggctggtcttgaactc-tgacttcaagtgatctgcccacctcagcgtcccaaaatgctgggatta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811147 136 + 60714840 caggtgcctgccaccaggcccggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgcccacctcagtgtcccaaaatgctgggatta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103329668 134 - 106955855 cgggtgccggtcaccaggcctggctaattttttgtggtttt----------tgtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatctgccca-ctcagtgtccc-aaatgctgagatta i nomLeu3.chr10 C 0 T 64436 s rheMac3.chr19 60628572 146 + 64156825 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769172 146 + 59248254 caggcacccaccaccaggcctggctagatttttgtggtttttatagagatgtatagagatggggtttcactatgttggccgggctggtcttgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874416 136 + 51301725 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatggggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaagtgctggaattg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582617 136 + 50890351 caggcacccaccaccaggcctggctagatttttgtggtttt----------tatagagatgaggtttcactatgttggccaggctggtcttgaactcctaacctcaagtgatctgcccacctcagcctcccaaaatgttggaattg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I a score=334363.000000 s hg38.chr19_GL949753v2_alt 687236 237 + 796479 tgggc----atgagccaccacCACACCCGGttttgttttttttttttttttttttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtg-----gtgcaatcatggttcactgcagccttgacctcccaagctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag s panTro4.chr19 59888960 224 + 63644993 taggc----atgagcaaccaccacacccggcttt------------------tttttt-----------ttttttttttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtacaatcatggttcactgcagccttgacctcccaagctctggttatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccatgcctggctaatttttttcactttttgtagagacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56811283 221 + 60714840 taggc----gtgagtcaccCCCACACCTGAC---------------------tttttt-----------ttgttttgttttttgaaacagggcttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgacctcccaggctctggtgatcctcctgcctcagcctcctgagtagctgggaccacaggcacctgccatcacgcctggctaatttttttcactttttgtagagacag i ponAbe2.chr19 C 0 T 90216 s rheMac3.chr19 60628718 213 + 64156825 taggtgtgagtgagtta---ccacacctggc---------------------ttttct-------------------gtttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacccctcctggctaa-ttttttcactttttgtagagacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769318 212 + 59248254 taggtgtgagTGAGTTA---CCACACCTGGC---------------------tttttt--------------------tttttgaaacgggacttcactctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccctgaccacccaggcttaggcaatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccacctggctaa-ttttttcactttttgtagagacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874552 211 + 51301725 caggc----gtgagtca---ccacacctggc---------------------cttttt-----------------ttttttttgaaacaggactttgctctgtcacttaggctggagtgcagtggtgcaatcacggctcactgcagccttgaccacccaggcttaggcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccaccccgcctggctaa-ttttttcactttttgtagaaacag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582753 229 + 50890351 caggg----atgagtca---ccacacctggT---------------------TGtttttttttttttttttttttttttttttgaaacaggacttcgctctgtcacttaggctggagtgcagtggtgcaatcatggctcactgcagccttgaccacccaggcttaagcgatcctcctgcctcagcctcctgagtagctgggaccacaggcacttgccacctggcctggctaatttttttcactttttgtagagacag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=111518.000000 s hg38.chr19_GL949753v2_alt 687473 85 + 796479 ggtcttgctatgttgcccaggctggcctcgaattactaaactcaatcagtcctcctgcctcaccctcccaaactgctggggtaca s panTro4.chr19 59889184 85 + 63644993 ggtcttgctatgttgcccaggctggtctcgaattactaaactcaatcagtcctcccgcctcaccctcccaaactgctggggtatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60628931 85 + 64156825 ggtcttgctatgttgcccaggctggtcttgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55769530 85 + 59248254 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccaccttatcctcccaaagtgctggggtaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47874763 85 + 51301725 ggtcttgctatgttgtccaggctggtctcgaattactaagctcaatcagtcctcccacctcatcctcccaaagtgctggggtaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47582982 85 + 50890351 ggtcttgctatgttgcccaggctggtctcgaattactaaacttaatcagtcctcccacctcatcctcccaaagtgctggggtaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939264 1 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=93204.000000 s hg38.chr19_GL949753v2_alt 687558 49 + 796479 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA s panTro4.chr19 59889269 49 + 63644993 ggtgtgagccatgacacctggccCTTACCAGCTACTTATATCCTGAAGA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629016 49 + 64156825 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55769615 49 + 59248254 ggtgtgagccatgacacctggccCTTACCAGCTATTTATATCCTGAAGA i macFas5.chr19 C 0 I 337 s papAnu2.chr19 47874848 49 + 51301725 ggtgtgagccatgacacCTGGCCCTTACCAGCTACTTATatcctgaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583067 49 + 50890351 ggtgtgagccatgacccctggcTCTTACCAGCTATTTACATCCTGAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45939265 49 + 49145316 ggtgtgagccatgacacctggcCCTTACCAACTATTTATATCCTGAAGA i calJac3.chr22 I 1 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T a score=1336.000000 s hg38.chr19_GL949753v2_alt 687607 2 + 796479 tt s panTro4.chr19 59889318 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770001 2 + 59248254 tt i macFas5.chr19 I 337 I 4 s chlSab2.chr6 47583116 2 + 50890351 tt i chlSab2.chr6 C 0 I 4 s calJac3.chr22 45939314 1 + 49145316 -t i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874897 0 + 51301725 C e rheMac3.chr19 60629065 2 + 64156825 I a score=16526.000000 s hg38.chr19_GL949753v2_alt 687609 27 + 796479 attattattttttttttttttgagata s panTro4.chr19 59889320 25 + 63644993 tttttt--tttttttttttttgagata i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629067 25 + 64156825 tttttt--ttttttttttttggagacg i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55770007 25 + 59248254 tttatt--tttttttttttttgagacg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47874897 18 + 51301725 ---------ttttttttttttgagata i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45939315 20 + 49145316 -------ttttgtttgtttttgagaca i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I a score=98946.000000 s hg38.chr19_GL949753v2_alt 687636 169 + 796479 gagtctctct------ctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcctggctaattttttt-gtgtttttagtagagacgg s panTro4.chr19 59889345 170 + 63644993 gagtctcaat------ctgtcacccaggctggagtgcagtggcgcgatcccggctcactgcaagctccgcctcccgggttcacgtcattctcctgcctcagcctcccgagt-agctgggactacaggcgcccaccaccacgcccggctaattttttttgtgtttttagtagagacgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629092 168 + 64156825 gagtctcgct------ctgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacaggcgcctgccacctcacccggctattttttgt-at-ttcttagtagagacgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770032 173 + 59248254 gagtctcgctctgtcactgtagcccaggctgcagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcagcctccggagt-agctgggactacagg-ggctgccacctcgcccagctattttttgt-at-ttcttagtagagacgg i macFas5.chr19 C 0 C 0 s calJac3.chr22 45939335 167 + 49145316 gggtcttgct------ctgttgccctggcttgattgcggtggcaagatcatagttcattacagcctcaaccttccaggctccggtgatcatccgacctcagcctccctttcgaactgggact-cagttgtgcactgccatacctgactaatatttgt-a--tttttggtagagacag i calJac3.chr22 C 0 I 715 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=53878.000000 s hg38.chr19_GL949753v2_alt 687805 120 + 796479 ggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccCCTGAAGA----TTGTG---- s panTro4.chr19 59889515 120 + 63644993 ggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctcccagagtgctgggattacaggcgtgagccaccgcgcccagccCCTGAAGA----TTGTG---- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629260 122 + 64156825 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcT------GAttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770205 118 + 59248254 ggtttcaccgtgttacccaggatggtctcgatctcctgacctcgtgatccgcccatctcggcctcctaaagtgctgggattacaggcttgagccaccgcgcccggcc------GA----ttttttttt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e chlSab2.chr6 47583118 4 + 50890351 I e papAnu2.chr19 47874915 0 + 51301725 C a score=9370.000000 s hg38.chr19_GL949753v2_alt 687925 10 + 796479 ttttgagatg s panTro4.chr19 59889635 10 + 63644993 ttttgagatg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629382 10 + 64156825 ttttgagatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55770323 10 + 59248254 ttttgagatg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47583122 10 + 50890351 ttttgagatg i chlSab2.chr6 I 4 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e papAnu2.chr19 47874915 0 + 51301725 C a score=368992.000000 s hg38.chr19_GL949753v2_alt 687935 292 + 796479 gggtcttgctgtgttgctccggcttgattgcagtggcacagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt s panTro4.chr19 59889645 283 + 63644993 gggtcttgctatgttgctccggcttgattgcagtggtgcagtcatagctcattgcagcctcaaccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgcactgccacacctgactaatatttgtatttttggtagggacagtttcactatgttg---------gtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccaaagtgctgggattacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttttttt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60629392 292 + 64156825 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcagcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtgtcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i rheMac3.chr19 C 0 T 77969 s macFas5.chr19 55770333 292 + 59248254 ggttcttgctctgttgccctggcttgattgcggtggcacaatcatagctcattgcatcctcaaccttccaggcttcagagatccttttacctcagactcctgagtagctggaactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatacggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGAC-----------------------------tttttatttt i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47874915 317 + 51301725 ggatcttgctctgttgccctggcttgattgtggtggcacaatcatagctcattgcagcctcagccttccaggctccagagatcctcttacctcagcctcctgagtagctgggactacaggtgtgccctgccacacctgactaatatttgtatttttggtggggacagtttcactgtgttgccagatatggtgtcaaactcctggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccatgaagacttttattttt----ttagtattatttttatttttatttt i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47583132 321 + 50890351 ggatcttgctctgttgccctggcttgattgcggtggcacaatcatagttcattgcagcctcaaccttccaggctccagagatcctcttacctcagactcctgagtagctggaactacaggtgtgctctgccacacccgactaatacgtgtatttttggtggggacagtttcactctgttgccagatacagtgtcaaactcttggtctcaagtgatcctcccaccttggcctcccagagtgctggggttacagacatgattcaccacacctggccATGAAGACtttttattttattattattattatttttatttttatttt i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T a score=218958.000000 s hg38.chr19_GL949753v2_alt 688227 299 + 796479 t-ggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-ggttcaagtgattctcttgcctcagcctcccgagtagctgggattataggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccacgtgcctcagcctcccaaagtgttgggattacaggtgtgagtcactgcgcctggtcTCATGAAGACCtt s panTro4.chr19 59889928 300 + 63644993 ttggacaaagtctcactctgttgcccaggatggaatgcagtggcatgatctcagctcactgcaacctctgacctccgcctccc-agttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggtgtctgccaccaagcccagctaatttttgtaattttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcgtgatccgcgtgcctcagcctcccaaagtgttgggattacgggtgtgagtcactgcgcctggtcTCATGAAGACCtt i panTro4.chr19 C 0 C 0 s macFas5.chr19 55770655 272 + 59248254 -ttgacaaagtcttactcttttgcccaggatggaattcagtggcatgatcttggctcactgtaac--ctgacctccgcctcccgggttcaagcgattctcttgccgcagcctccagagcagctgggattacaggcacccgccaccacacccagcta--------------------------atttcaccatgtttgtcaggctggtctcaaactcctgacctcgtgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47875234 298 + 51301725 -ttgac--agtctcacgctgtcacccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcccgggttcaaaagattctcttgCCATAGCCTccggagtagatgggattacaagcacccgccaccacgtctggctaatttttgtaattttagtagagacaggatttcaccatgttcgtcaggctagtctcgaactcctgacctcgtgatccacctgcctcagtctcccaaagtgctgggattataggtgtgagccactgtgcccggcctcgtGAAgacctt i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47583455 296 + 50890351 -ttgacaaagtct----cttttgcccaggatggaatgcagtggcatgatcttggctcactgtaacctctgacctccgcctcctgggttcaagcgattctcttgccgcagcctccggagtagctgggattacaggcacccaccaccacacccggctaatttttgtaattttagtagagacaggagttcaccatgttcgtcaggctggtcttgaactcctgacctcatgatccacctgcctcagcctcccaaagtgctgggattataggtgtgagccactgtgcccagccTCATGAAGACCtt i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56811504 90216 + 60714840 T e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103329802 64436 - 106955855 T e rheMac3.chr19 60629684 77969 + 64156825 T a score=940392.000000 s hg38.chr19_GL949753v2_alt 688526 442 + 796479 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccaagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAATTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCACCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct s panTro4.chr19 59890228 439 + 63644993 ttttgagacagagtcttgctctgtcacccaggctggagtgcagtggtacaatct-------cactgcagcctccgcctcccaggttcaagtga-ttctcctgccttagcctcccgagtagctgggattacaggcgcctaccaccacgtctggctaatttttgtatt---agtagagacagcgtttcaccatgttggccaggctggtctcaaactgctgacctcaaatgaactgtctgcctcagcctcacaaagtactgggattacaggcatgagccacctcacctggTGGTGAAGACTCTAAAGGCTCTTCTCAGATCAGCCTTTGTCCTGAAGTTCACATGCCCGTGTCCAGTTCCCTCCCCAGCATCTTTTCAGGAGTTCCATGGTCTCGCCTCTTCATTATCCAGGGTTAAGCTGCAGATATTGTTATTAGGATTCCACCttgttct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56721288 449 + 60714840 ttttgagacagaatctcgttctgttgcccagggtggagtgcagtggtgcaatctctcctcacactgcaacctccccctcccaggttgaagaaa-ttctcatgcatcagcctcctaagtaactgggaccacaggcgtgcaccactgcaccaggctactttttgtatttttagtagagatggggttttgccatgttgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTGGTCTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaatttcacatgcccgtgttcagttgcctccccagcatctTTTCAGGAGTTCCACAGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATATTCTTATTAGGATTCCACCTTGTTCT i ponAbe2.chr19 T 90216 I 99025 s nomLeu3.chr10 103265366 423 - 106955855 ttttgagacagaatctcgttctgttgcccaggctggagtgcagtggtgcaatctctgctcacactgcaacctccacctcccaggttgaagcaa-ttctcatgcatcagcctcctaagtaactgggaccagaggcgtgcaccaccgcaccaggctactttgtgtatttttagtagagacggagttttgccatgttgcccaggctcgtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaaagtgctgggattacaggcgtgagccaccTCACGTGGtggtgaagactctaaaggctcttctcagaccagcctttgtcctgaagttcacatgcctgtgtccagttgcctccccagcatctTTTCAGGAGTTCCACGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGATA-------------------------- i nomLeu3.chr10 T 64436 C 0 s rheMac3.chr19 60551715 449 + 64156825 ttttgagacagaatctcgttctgtcgcccaggctggagtgcagtggcacaatctctgttcacactgcaccctccacctcccaggttgaagcaa-ttctcgtgcgtcggcctcctaagtaactgggaccacaggcgtgcaccaccgcaccaggctactttttgtatttttagtagagatggggttttgccatgtcgcccaggctagtctcaaactcctggcctcaagtgatctgtctgcctcggcctcacaccgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGTTACCTCTCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTGAGCTACAGATATTCTGATTAGGATTCCACCTAGTTCT i rheMac3.chr19 T 77969 I 78069 s macFas5.chr19 55770927 435 + 59248254 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccagattcaagagatttctcctgcctcagtctccctagtagctgggattacaggtgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcagcctcacaacgtgctgggattacaggcgtgagccaccacgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTCCAGAT------ATTAGGATTCCACCttgttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875532 434 + 51301725 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccacctcccaggttcaagaga-ttctcctgcctcagtctccctaggagctgggattacaggcgcctaccaccacgcctggctaattttcgtattttcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgagctcaagtgatctgtctgcctcggcctcacaacgtgctgggattacaggcgtgagccaccgcgcctggtggtGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTTCTGAGGGTCACATGCCCGTGTCCAGCTGCCTCCCCAACATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAGCTGCAGAT------ATTAGGATTccaccttgttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47583751 433 + 50890351 ttttgagacag--tcttgctctgtcacccaggctagagtacagtggtacaatct-------cactgcagcctccgcctcccaggttcaagagatttctcctgcctca-tctccctagtagctgggattacaggtgcctaccaccacgcctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgtctgcctcagcctcacaaagtgctgggattacaggcatgagccacctcgcctggTGGTGAAGACTCTAAAGGCTCTTCTCAGACCAGCCTTTGTCCTGAGGTTCACATGCCCGTGTCCAGTTACCTCCCCAGCATCTTTTCAGGAGTTCCATGGACTCGCCCCTTCATTATCCAGGGTTAAACTGCAAAT------GTTAGGATTCCACCttgttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e calJac3.chr22 45939502 715 + 49145316 I a score=620.000000 s hg38.chr19_GL949753v2_alt 688968 5 + 796479 -ctctc s panTro4.chr19 59890667 4 + 63644993 -cttt- i panTro4.chr19 C 0 C 0 s macFas5.chr19 55771362 4 + 59248254 -tttt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875966 5 + 51301725 ttttt- i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47584184 5 + 50890351 ttttt- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103265789 0 - 106955855 C e rheMac3.chr19 60552164 78069 + 64156825 I a score=215144.000000 s hg38.chr19_GL949753v2_alt 688973 141 + 796479 tttttttttttttttttgatacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccttgcctcagcctcgcaagtagctgggact s panTro4.chr19 59890671 140 + 63644993 -ttttttttttttttttgagacggagtctcgcttgctcttttg-ccaggctgaagtgcagtggagcgatcttggctcactgcaatctccgcctcctgggttcaagcaattcccctgcctcagcctcgcaagtagctgggact i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265789 133 - 106955855 --ttcttttctttttttgagac--agtctc----gctctgtcgcccaggctggagtgcagtggcgcagtctcggctcactgcaacctccatctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggac- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630233 141 + 64156825 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggact i rheMac3.chr19 I 78069 I 8 s macFas5.chr19 55771366 140 + 59248254 ttttttcttttttttttgagattgagtctcacttgctttgttg-ccaggctggagcgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47875974 141 + 51301725 tttttttttttttttttgagatggagtctcacttgctttgttg-ccaggctggaacgcagtggcgcaatcgtggctcacttcagtctccgcctcctgggttcaagcagttcccctgcctcagcctcccaagtacctgggact i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47584189 136 + 50890351 ttgttttttttttttttgagatggagtctc----gctttgttg-ccaggctggagctcagtggcgcaatcttggctcactgcagtctccgcctcctgggttcaagcaattcccctgcctcagcctcccaagtacctgggac- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=4871.000000 s hg38.chr19_GL949753v2_alt 689114 10 + 796479 tacaggtaac s panTro4.chr19 59890811 10 + 63644993 tacaggtaac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265922 9 - 106955855 tacaggt-gc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55771506 9 + 59248254 tacagtt-gg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876115 8 + 51301725 -acagtt-gc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584325 9 + 50890351 tacagtt-gc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e rheMac3.chr19 60630374 8 + 64156825 I a score=233999.000000 s hg38.chr19_GL949753v2_alt 689124 140 + 796479 acaccaccatgcccggctaattttttg---ttttagtagagacggggcttcaccatgttggccgggatggtctcgatctcctgac-ctcatgatccgcctgccttggcctcccaaagtgttggg-ttacaggcatgagccaccat s panTro4.chr19 59890821 141 + 63644993 acaccaccatgcccggctaattttttg---ttctagtggagacggggcttcaccatgttggccaggatggtctcgatctcctgac-ctcatgatccgcctgcctcggcctcccaaagtgttgggattacaggcgtgagccaccat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103265931 144 - 106955855 ccgccaccacgcccagctaattttttgtatttttagtagagacagtgtttcaccgtgttatccaggatggtctcgatcttctgac-ctcaggatctacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgT i nomLeu3.chr10 C 0 I 66588 s rheMac3.chr19 60630382 143 + 64156825 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i rheMac3.chr19 I 8 C 0 s macFas5.chr19 55771515 143 + 59248254 gcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaatctcctgac-ttaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876123 143 + 51301725 tcaccaccatgcccggctaattttttgtg-ttttagtagagatggggcttcaccctgttggccaggatggtctcaagctcctgac-ttaatgatccacctgcgtcggcctcccaaagtgttgggattacaggcgtgagccacccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584334 144 + 50890351 tcaccaccatgcccggctaattttttgtg-ttttagtagagatagggcatcaccctattggccaggatggtctcaatctcctgacactaatgatccacctgcctcggcctcccaaagtgttgggattacaggcgtgagccacccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=6141.000000 s hg38.chr19_GL949753v2_alt 689264 6 + 796479 gcccgg s panTro4.chr19 59890962 6 + 63644993 gcccgg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60630525 6 + 64156825 acccga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771658 6 + 59248254 acccga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876266 6 + 51301725 acccga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584478 6 + 50890351 acccaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I e nomLeu3.chr10 103266075 66588 - 106955855 I a score=353475.000000 s hg38.chr19_GL949753v2_alt 689270 201 + 796479 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCTggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacgtagagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcacattcctgtaatcccagcta s panTro4.chr19 59890968 201 + 63644993 cTGATTCCACCTTGTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGGGTTAGGCCCggcaggcagatcacctgaggttgggagttcaagaccagcctgagcaacgtggagaaaccctgtctgtactaaaaatacaaaattagccaggtatggtggcgcattcctgtaatcccagcta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332663 201 - 106955855 CTGATTCCACCTTCTTCTTACATTCTTTCCCAGTTCATTTTAAATTTATTTACCTCATCAGAAACTAGGGAGTTAGGCCCggcaggcagatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaaccctgtgtgtactaaaaatacaaaattcgccaggtatggtggcgcatgccggtaatcccagcta i nomLeu3.chr10 I 66588 C 0 s rheMac3.chr19 60630531 201 + 64156825 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccctcgtcccagcta i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771664 201 + 59248254 cTGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATTTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcagacagataacctgaggttgggagcttgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcccatgaccgtcgtcccagcta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876272 201 + 51301725 cTGATTCCACCTTGTACTTATATTCTGTCCcagttcattttaaatttatctacCTCATCAGAAACTAGGGAGTTAGGCCCCGCAGacagataacctgaggttgggagctcgagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584484 201 + 50890351 ccGATTCCACCTTGTACTTATATTCTTTCCCAGTTCATTTTAAATGTATCTACCTCATCAGAAACTAGGGAGTTAGGCCCCgcaggcagataacctgaggttgggagctcgagaccagcctgacaaacatggagaaaccctgtctgtactaaaaatacaaaattagccggacatggtggcgcatgcccgtcgtcccagcta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I e calJac3.chr22 45939502 715 + 49145316 I a score=114166.000000 s hg38.chr19_GL949753v2_alt 689471 53 + 796479 ctccggaggccgaggcaggagaatcacttgaacccaggaggcggagg--ttgcag s panTro4.chr19 59891169 53 + 63644993 ctcgggaggccgaggcaggagaatcacttgaaaccaggaggctgagg--ttgcag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103332864 53 - 106955855 ctcgggaggctgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630732 53 + 64156825 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771865 53 + 59248254 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876473 53 + 51301725 ctcaggaggctgaggcaggagaatcacttcaacccaggaggcagagg--ttgcag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584685 53 + 50890351 ctcaggagactgaggcaggagaatcacttgaacccaggaggcagagg--ttgcag i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940217 53 + 49145316 ctcaggaggctgaggcaggagagaagcttgaacccaggagatggagggatcgt-- i calJac3.chr22 I 715 C 0 e canFam3.chr1 20041887 933 - 122678785 I e ponAbe2.chr19 56721737 99025 + 60714840 I a score=253887.000000 s hg38.chr19_GL949753v2_alt 689524 140 + 796479 tgagc-cgacatcacaccatt-gcattccag-cctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTA----GTTtgtgtg-------tgtgtgtgtg s panTro4.chr19 59891222 142 + 63644993 tgagc-cgagatcgcaccatt-gcattccag-cctgggcaacaagagcaaaactacgtctcaaaaaaaaaa-----------------------agaaaaaCTAGGCAGTTAATCTTCAAAGCCTTT-CCAGTGGCCTCATGCATGAGGG----gtgtgtgtg-------tgtgtgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56820762 141 + 60714840 tgagc-cgagatcgcaccattggcactccagccctgggcaacaagagcaaaactacatctcaaaaaaaaa-------------------------gaaaaTCTAGGCAGTTAATCCTCAAAGCCTTTCCCAGTGG-CTTATGCATGAgt-----gtgtgtgtg-------tgtgtctgtg i ponAbe2.chr19 I 99025 I 126 s nomLeu3.chr10 103332917 143 - 106955855 ggagc-agagatcgcaccatt-gcactccag-cctgggcaacaagagtgaaactacctctcaaaaaaaa--------------------------gaaaaaCTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGGCCTTATGCGTGAGTACTCtgtgtgtgtg-------tgtgtgtgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630785 123 + 64156825 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagcgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----CTGTGTGTG----------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55771918 123 + 59248254 tgagc-cgagatcgcgccact-gcactccag-cccgggcaacaagagtgaaactccgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876526 130 + 51301725 tgagc-cgagatcgcgccact-gcactccag-cccgggcgacaagagcgaaactccgtctcaa--------------------------------gaaaaattaGGCAGTTAATCCTCAAAGCCGTT-CCAGTGACCTTATGCGTGAGTA----CTGTGAGTACTGTGCG---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584738 123 + 50890351 tgagc-cgagattgcgccact-gcactccag-cccgggcaacaagagcgaaactctgtctcaa--------------------------------gaaaaaTTAGGCAGTTAATCCTCAAAGCCTTT-CCAGTGACCTTATGCGTGAGTA----Ctgtgtgtg----------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940270 145 + 49145316 tgagcaagttattgtaccgag-gcacatcag-cttacgaaacacagacgaaagtctatctcaagacaaatatagggaaataaaaaTCGATAAGTAAAGAAAGTAGGGAGCTAATCCTCAAAGCCTTT-CCAAGCA-TTTATGTGTGAGT------------------------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=30663.000000 s hg38.chr19_GL949753v2_alt 689664 27 + 796479 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA s panTro4.chr19 59891364 35 + 63644993 tgtgtg-----------------------------------tgtgtgtgtgtgtgtgtgtgtgtCTTTCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821029 27 + 60714840 tgtgtg-----------------------------------tctgtgtgtgtgtgt--------TTTTCA i ponAbe2.chr19 I 126 C 0 s nomLeu3.chr10 103333060 27 - 106955855 tgtgtg-----------------------------------tgtgtgtgtgtgtgt--------CTTTCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630908 21 + 64156825 -----------------------------------------TGTCTGTGTGTCTGT--------TTTTCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772041 21 + 59248254 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876656 62 + 51301725 TGAGTACTGTGAGCCGTTCCAGTGACCTTATGCGTGagtactgtgtgtgtgtctgt--------ttttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584861 21 + 50890351 -----------------------------------------tgtctgtgtgtctgt--------TTTTCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940415 19 + 49145316 -------------------------------------------CCTGCGGTAATGT--------GTTTCA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20041887 933 - 122678785 I a score=83355.000000 s hg38.chr19_GL949753v2_alt 689691 39 + 796479 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA s panTro4.chr19 59891399 39 + 63644993 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCGGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821056 39 + 60714840 CACCATGTGTTCTGAACTACTAAGGAA--TTCTC--------ACCAGAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333087 39 - 106955855 CACCATGTGTTCTGAACTACTTAGGAA--TTCTC--------ACCAGAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630929 37 + 64156825 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772062 37 + 59248254 CGCCTTGAGTTCTGAACT--TTTAGAA--TTCAC--------ACCAGAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876718 37 + 51301725 cGCCTTGAGTTCTGAACT--TTTAGAA--TTCGC--------ACCAGAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584882 37 + 50890351 CACCTTGAGTTCTGAACT--TTTAGAA--TTCGT--------ACCAGAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940434 41 + 49145316 CCCCATGAGATATGAAATCAATAGGAGTCTTCTC--------ACCAGAA i calJac3.chr22 C 0 I 328 s canFam3.chr1 20042820 47 - 122678785 CACTGTGTGTTCTCAACTACACAGGAA--GCAACCATAGGAAGCCAGAA i canFam3.chr1 I 933 I 1 a score=80680.000000 s hg38.chr19_GL949753v2_alt 689730 28 + 796479 AGGCACATAAACCTGGGATCATGGCCTA s panTro4.chr19 59891438 28 + 63644993 AGGCACGTAAACCTGGGATCATGGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821095 28 + 60714840 AGGCACGTAAACCTGGGATCATGGCCTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333126 28 - 106955855 AGGCACGTAAACCTGGGATCATGGCCTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630966 28 + 64156825 AGGCACCTAAACCTGGGATCATGGCCTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772099 28 + 59248254 AGGCACCTAAACCTGGGATCATGGCCTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876755 28 + 51301725 AGGCACCTAAACCTGGGATCATGGCCTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584919 28 + 50890351 AGGCACCTAAACCTGGGATCATGGCCTA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20042868 28 - 122678785 AGACATGTAAGCCTGAGATAGTAACTTG i canFam3.chr1 I 1 C 0 e calJac3.chr22 45940475 328 + 49145316 I a score=965021.000000 s hg38.chr19_GL949753v2_alt 689758 327 + 796479 ATGTACTTTCACTTTTACATCCAGTACCTTATCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACTGAGACTCAGGGGTCCAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGC-CGCCC--TTTTTCTCCAGGGATAACACGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCTTCAAAACAGAAGCACAAGGTGGGTGTCAGGACCTCCAATGTTGGAGTCAGCTGA-GGAAGC-CCCCCGTTCTTGCTGCTATCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- s panTro4.chr19 59891466 327 + 63644993 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACGTCCTTTTTAG-------------TACCTAATCTAGGCTTCACTACCGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAACGC-CCCCC--TTTTTCTTCAGGGATAACAAGG---AAAGAACGACCA---CCTCTAGACGTGGACGAAATGCTGGAGCGCCTCAAGACAGAAGCACTAGGTGGGTGTCAGGACCTCCAGTGTTGGAGTCAGCTGA-GGAAGC-CGCCCATTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAGTCTTT-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821123 342 + 60714840 ATGTACTTTCACTTTTACATCCAGTACCTTGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGACTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGCGCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAACAACCA---CCTCTAGACGTGGAGGAAATGCTGGAGCACTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGATGTTGGAGTCAGCTGAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333154 342 - 106955855 ATGTACTTTCACTTTTACATCCAGTACCTTGTCCACATTCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGTTTAACTATTGAGACTCAGTGGTCGAACTTGAGCCATCTTGGAGTCCC--------------------ACTGCCAGCACAGCAACAGGCCTGTAATGTCCCCCC--TTTTTCTTCAGGGGTAACACGG---AAAGAACGACCA---CCTCTAGACCTGGAGGAAATGCTGGAACGCTTCAAAGCAGAAGCACTAGGTGGGTGTCAGGACCTCCGACGCTGGAGTCAGCCAAGGGAAGC-CGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTGAAGAACCCCATCTCTCTCCAATCTTT-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60630994 341 + 64156825 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTTGGCTTAACTATTGAGACTCAGTGGTC-CACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCAATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i rheMac3.chr19 C 0 I 307 s macFas5.chr19 55772127 341 + 59248254 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGCCCCCCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCCGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCGATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47876783 342 + 51301725 ATGTACTTGCACTTTTACATCCAGTACCTCGCCAACATCCTTTTTAGTAATCTAGTAAATTACCTCATCTAGGCTTAACTATTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAATGccccccc--TTTTTCTTCAGGGATAACACGG---AAAGAAAGAGAA---CCTGTAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCTGTCTCTTTCCGATCTTT-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47584947 342 + 50890351 ATGTACTTGCACTTTTACATCCAGTACCTCGTCAACATCCTTTTTAGTAATCTAGTAAATTACCTAATCTAGGCTTAACTACTGAGACTCAGTGGTCGCACTTGAGCCATCTTGGAGGCCC--------------------ACTGCCAGCACAGCAACAGGCCAGTAACGCCCCTCC--TTTTTCTTCAGGGATAACACGG---AAAGAAAGACAA---CCTATAGACGTGGAGGAAATGCTGGAGCGTTTCAAAGCAGGAACACTAGGTGGGTGACAGGACCTCCGATGCTGGAGTCAGCTGAGGGAAGC-TGCCCCTTCTTGCTGCTTTCT--------CCTGTTCCTTTTAAGAACCCCGTCTCTTTCCAATCTTT-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45940803 347 + 49145316 ACATACTTCCATTTTTATATCCAGTACCTTGTCAACATCGACTGTCCTAAGCTAGTAAATTAGCTAATCTAGGCGTAAGTATTGAGACTCAGTGGTTGCATTTGAGCCAGCCTGGAGTCCC--------------------ACGGCCAGCACAGCCACAGGCCTGTAGTGTCCCCTCTATTTTTTTTCAGAGACAATACGG---AAAGGAGAACCAGAGCCTGTAGACCTGGATGAAATGCTGGTGCACTTCAAGGCAGAAGCACAAGGTGGGTGTTAGGACCTCCGACGTCAGAGTCCGCTGAGGGAAGC-TGCCCTCTCCTGCCGCTTTCT--------CCTGTTCCTCTGGAGAACCCCAACTCTCCCCAATCTCA-- i calJac3.chr22 I 328 I 2 s canFam3.chr1 20042896 354 - 122678785 ACACATTTTAA-TTTTATCTCTAAGATCAGGTTAATGTCCTTTTTATGTAACTGG---------------GGGTTTAAGTA-TGAGACCCAGTTGTC-AACATGCGCATTCTTGAAGTCCTCTCTCCTAGGCAGAAGTTTAAGTACTGACATAGTTACAGGACTATAATG--CCTCC--TCTTTTCTCAGGGATCACCAGGACTACAGAACTAAAA---TGTGCAAACCTGGAAGAACCCCCAGAGCATGTAGAAGAAAAAGATTCAGGTTGGTCTTAGAACACCCAGAGTTGGAACAAGCCAAGCGACACATACCCCACCATGTTGTGTTCTCTCCACCCCCTTTCCTTTCTGGGAGCTCCATTTC--CCCAACCTCATT i canFam3.chr1 C 0 C 0 a score=220421.000000 s hg38.chr19_GL949753v2_alt 690085 73 + 796479 TCCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTCCCTTCCGTAAGAATAGAGGGAAG s panTro4.chr19 59891793 73 + 63644993 TTCTCCACTATTCTTAATGTGCCCACTGTCTTCTGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821465 69 + 60714840 TTCTCCACTATTCTTAATGTGCCCACTGTCTCCTGGAGAATGCCAACCTC----CCATAAGAATAGAGGGAAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333496 73 - 106955855 CTCTCCACTCTTCTTAATTTGCCCACTGTCTCCCGGAGAATGCCAACCTCCCTTCCATAAGAATAGAGGGAAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631642 73 + 64156825 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCCTAAGAATAACGGGAAG i rheMac3.chr19 I 307 C 0 s macFas5.chr19 55772468 73 + 59248254 TCCTCCACTATTCTTAATCTGCCCACTGTCTCCTAGAGAATTCCAACCTCCCTTCCGTAAGCATAGCGGGAAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877125 73 + 51301725 TCCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCATAAGCATAGCGGGCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585289 73 + 50890351 TTCTCCACTATTCTTAATCTGCCTACTGTCTCCTGGAGAATTCCAACCTCCCTTCCGTAAGAATGGCGGGAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941152 73 + 49145316 TTCTCCACTATTTTTAATTTGCCTACTGTCTACTGGAGAATGCCAAACTCCCTTCCATAAGAATAGAGGAAAg i calJac3.chr22 I 2 I 398 s canFam3.chr1 20043250 72 - 122678785 TTCTCCACTACTAATAGT-TATCAGTTGTCTCAGAGGAAATGCCTTCCTCCCTCACTTAACAACAAAGTGAGG i canFam3.chr1 C 0 C 0 a score=20214.000000 s hg38.chr19_GL949753v2_alt 690158 9 + 796479 AACGAACGT s panTro4.chr19 59891866 9 + 63644993 AACGAACAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821534 9 + 60714840 AACGAACGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333569 9 - 106955855 AACGAACGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631715 9 + 64156825 AACAAACGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55772541 9 + 59248254 AACAAATGT i macFas5.chr19 C 0 I 368 s papAnu2.chr19 47877198 9 + 51301725 AACAAATGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585362 9 + 50890351 AACAAATGT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043322 9 - 122678785 AATGACCAC i canFam3.chr1 C 0 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=102825.000000 s hg38.chr19_GL949753v2_alt 690167 78 + 796479 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACAGCGCAGAG--AGtttttg--tttttgtttttg-ttttgaga s panTro4.chr19 59891875 72 + 63644993 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGATGCAGAG--AGtttttg--tttttgtttt-------gaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821543 72 + 60714840 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAGAG--AGtttttg--tttttgtttt-------gaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333578 79 - 106955855 TGCAGAGAATTAGAAC----TCAGTTTGTAGAAAGTTAGGAGCACGGTGCAAAG--AGttcttg--tttttgtttttgtttttgaga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631724 66 + 64156825 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------Gtttg--tttttgtttt-------gaga i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47877207 66 + 51301725 TGCGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCGTGGTgcag-------ttttg--tttatgtttt-------gaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585371 66 + 50890351 TGTGGAGAATTAGAAC-----CAGTCTGTAGAAAGTTAGGAGCATGGTGCAG-------ttttg--tttttgtttt-------gaga i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20043331 79 - 122678785 TGAAGAGAACTGGAATTCTTTCAGTTCACGGAAAATT-GGTGTACTGTATGGAGTTACTCTTTAATTTTTCAATTT-------CAGA i canFam3.chr1 C 0 I 1335 e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=75913.000000 s hg38.chr19_GL949753v2_alt 690245 50 + 796479 cag----tttctctgttggccaggttggaatgcaatggcgcgatctcggctcac s panTro4.chr19 59891947 50 + 63644993 cag----tttctctgttggccaggctggaatgcaatggcgcgatctcggctcac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821615 50 + 60714840 cag----tttctctgttgcccaggctggaatgcaatggcgagatctcggctcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103333657 54 - 106955855 cggagtctcgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60631790 52 + 64156825 tggag--tttctctgtcgcccaggctggaatgcagtggcgcgatctcagctcac i rheMac3.chr19 C 0 M 226 s papAnu2.chr19 47877273 52 + 51301725 tggag--tttctccgtcgcccaggctggaatgcagtggtgcgatctctgctcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585437 52 + 50890351 tggag--tttctctgttgcccaggctggaatacagtggtgcgatctctgctcac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I a score=125908.000000 s hg38.chr19_GL949753v2_alt 690295 117 + 796479 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagctgggattataggcacctgccaccacacccagctaattttttttttttttttt s panTro4.chr19 59891997 117 + 63644993 tgtaacctccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagcggggattataggcacctgccaccacacccagctaattttttttttttttttt i panTro4.chr19 C 0 I 2 s ponAbe2.chr19 56821665 117 + 60714840 tgtaacttccacctcccaggttcaagcgattctcctgattctcctgactcagcctc-ctgagtagccaggattataggcacctgccaccacacccaactaattttttttttttttttt i ponAbe2.chr19 C 0 I 9 s nomLeu3.chr10 103333711 108 - 106955855 tgcaagctccgcctcccgggttcacgc---------cattctcctgcctcagcctctccgagtagctgggactacaggcgcccgccaccacg-ccggctaattttttttttgtatttt i nomLeu3.chr10 C 0 I 5 s papAnu2.chr19 47877325 114 + 51301725 tgcaacctccacctcccaggttcaagcaattctcctgaccctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585489 114 + 50890351 tgcaacctccacctcccaggttcaagcgattctcctgactctcctgcctcagcctc-ctgagtagctgggattgcaggtgcctgccaccacacccagctaatttttttttttttt--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e macFas5.chr19 55772550 368 + 59248254 I e rheMac3.chr19 60631842 226 + 64156825 M a score=187842.000000 s hg38.chr19_GL949753v2_alt 690412 132 + 796479 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat s panTro4.chr19 59892116 132 + 63644993 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatcccttttcactgcaacctccgcctcccagattcaag---------tgattgtcctgtctcagcctcctgagtagctgggactacaggtgcat i panTro4.chr19 I 2 C 0 s ponAbe2.chr19 56821791 132 + 60714840 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctccgcctcccagattcaag---------tgattgtcctgcctcagcctcctgagtagctgggactacaggtgcat i ponAbe2.chr19 I 9 C 0 s nomLeu3.chr10 103333824 251 - 106955855 gagacagggtttcaccgtggtctcgatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaagcgtgagccaccacacccggcctttgtttttgttttgagacagtttctctgtcgcccaagctggaatgcaatggcacgatctcggctcactgtaacctccacctcccaggtccaagcaattctcctgattctcctgactcagccgcctgagtagccggga-tataggcgcct i nomLeu3.chr10 I 5 C 0 s macFas5.chr19 55772918 132 + 59248254 gagacgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattataggtgcac i macFas5.chr19 I 368 C 0 s papAnu2.chr19 47877439 132 + 51301725 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagtacagtggtatcatccctgttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcagcctcccaagtagctgggattacaggtgcac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47585603 132 + 50890351 gagatgaag--------------------------------------------------------------------------------------------------tcttgttct-------------tgtcatccaggctggagttcagtggtatcatccctcttcactgcagcctccgcctcccaggttcaag---------tgattctcctacctcaacctcccaagtagctgggattacaggtgcat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60631842 226 + 64156825 M a score=176858.000000 s hg38.chr19_GL949753v2_alt 690544 102 + 796479 gccaccacgcccagctaatt-----tttttttgtacttttagtagagacaggtttcaccatctcattcagggtgg------------------------tctcaaactcctgacctcaaga-----------gatctgct--cc s panTro4.chr19 59892248 99 + 63644993 gccaccacgcccagctaatt-----tttttt-gtacttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctc--ga-----------gatctgcc--cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56821923 102 + 60714840 gccaccacgcccagctaatt-----tttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tcttgaactcctgacctcaaga-----------gatctgca--cc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103334075 135 - 106955855 gccaccacacccagcTAACt-----ttttttttttttttttg-agacaaagtcttgttcttgtcacccaggctggagtatagtggcaccatccctgttcactgcaacctctgcctcccagattgaagtgattgtcctgcc--t- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632068 105 + 64156825 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i rheMac3.chr19 M 226 C 0 s macFas5.chr19 55773050 105 + 59248254 gccaccaagcccagctaattttttctttttttatatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcaaactcctgacctcaaga-----------gatctgcc---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47877571 107 + 51301725 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcccc-- i papAnu2.chr19 C 0 M 318 s chlSab2.chr6 47585735 105 + 50890351 gccaccaagcccagctaattttttctttttttgtatttttagtagagacaggtttcaccatctcagtcaggctgg------------------------tctcgaactcctgacctcaaga-----------gatctgcc---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=210.000000 s hg38.chr19_GL949753v2_alt 690646 8 + 796479 acccaccc s panTro4.chr19 59892347 2 + 63644993 ------cc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822025 2 + 60714840 ------cc i ponAbe2.chr19 C 0 I 2 s rheMac3.chr19 60632173 3 + 64156825 -----ccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773155 3 + 59248254 -----ccc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585840 3 + 50890351 -----ccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334210 0 - 106955855 C e papAnu2.chr19 47877678 318 + 51301725 M a score=49644.000000 s hg38.chr19_GL949753v2_alt 690654 50 + 796479 ccaagtctcccgaagtgctgggattacaggcgagagccaccgtacccggc s panTro4.chr19 59892349 50 + 63644993 cccagtctcccaaagtgctgggattacaggcgtgagccaccgtacccggc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103334210 48 - 106955855 --cagcctcctgagtagctgggactacaggtgcatgccaccacgcccagc i nomLeu3.chr10 C 0 M 880 s rheMac3.chr19 60632176 50 + 64156825 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773158 50 + 59248254 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585843 50 + 50890351 ttcagcctcccaaagtgctgggatcacaggcatgagccacagcacgcggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=165380.000000 s hg38.chr19_GL949753v2_alt 690704 200 + 796479 cTTCTTTAAATTATTTAAAAGTTGACAGGTggccaggtgtggtggctctcacctataatctcccagcactttgggaggctgaggcgggtggatca--------agagatcgagaccatcctggccaacatggtgaaaccc-aactctactaaaaacacaaaaattagccgggtgtggtggcacccgcctgtagtcccagctactcagga s panTro4.chr19 59892399 209 + 63644993 cTTCTTTAAATTATTTAAAAGTTGACTGGTggccaggtgtggtggctcacacctataatctcccagcactttgggaggctgaagcgggtggatcacgagatcaagagatcgagaccgtcctggccaacatggcgaaaccccaactctactaaaaacacaaaaattagccgggtatggtggcacccgcctgtagtcccagctactcagga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60632226 209 + 64156825 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtgggtcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773208 209 + 59248254 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacacctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgtgtacctgtagtcccagctactcagaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47585893 207 + 50890351 cTTCTTTAAATTCTTTACAAGTTGACAGGTggccaggcacggtagctcacgcctgtaatctcccagcactttgggaggctgaggcgggtggatcgtgagttc--gagattgagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgcgtaccggtagtcccagctactcagaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103334258 880 - 106955855 M e papAnu2.chr19 47877678 318 + 51301725 M a score=247646.000000 s hg38.chr19_GL949753v2_alt 690904 223 + 796479 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaa--TTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG s panTro4.chr19 59892608 225 + 63644993 ggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctggcaacagtgcgagactccatctt-aaaaaaaaaaaaaaaaaaaaTTGACAGGCATAAATGTATTTATGGTACATTGCTCAGACAACTTTAATATAAACAACTTACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335158 220 - 106955855 ggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgtgccactgcactccagcctggcaacagcgtgagactccatctc-aaaaaaaaaaaaaaa-----TTGACAGGCATAAATGTATTTATGGTACATTGTTCAGACAACTTTAATATAAACAACTCACAGAGAAAATTGAGTCTTTTGGGTAGGTGACTTGCCTGAGCTG i nomLeu3.chr10 M 880 C 0 s rheMac3.chr19 60632435 205 + 64156825 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctcaaaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773417 204 + 59248254 ggctgaggcaggagaatcccttgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggtgatagagcgagactccgtctc-aaaaaaaa------------TTGACAGGTATAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC----AGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47586100 206 + 50890351 ggctgaggcaggagaatcccctgaacctgggaggcagaggttgtagtgagctgagatcgtgccgctgtactccagcctggcaatagagcgagactctgtctc-aaaaaaaa------------TTGACAGGTGTAAATGTATTTATGGTACATTGTTCAGACAACTT-----TAAACAACTC--AGAGAAAATTGAGTCTTATGGGTAGGTGACTTGTCTGAGCTG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47877678 318 + 51301725 M a score=415354.000000 s hg38.chr19_GL949753v2_alt 691127 267 + 796479 ACTTTGTGAT-AGG-ttttttctg-----------ttttttttgtttttgaaatagagtctcactctgtcatgcaggctggagtgcagtggccccatcttggctcactgcaatctctgcctcctgggttc-aaggggtcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagatggggtttcaacagggtagccaggttggtctagaactcctgacctcaagtgatccacctac s panTro4.chr19 59892833 266 + 63644993 ACTTTGTGAT-AGG-ttttttctg-----------ttttttt-gtttttgaaatagagtctcactctgtcgtgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcccgggttc-aagggatcttcctgccacagcctccccaggtgctgggacta-taggtgcccaccac--tatgcctggctaactgttgtgtttttagtacagatggggtttcaccagggtagccaggttggtctggaactccttacttcaagtgatccacctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103335378 260 - 106955855 ACTTTGTGAT-AGGtttttttctg-----------ttttttttgtttttgaaatagagtctca--ctgtcacgcaggctggagtgcagtggcccgatcttggctcactgcaatctctgcctcctgggttc-aagggatcttcctgccatagcctccccaggtgctgggactg-taggtgcccaccactatatgcctggcta--------gtttttagtacagatggggtttcgccagggtagccaggttggtctggagctcctgacctcaagtgatccacctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632640 266 + 64156825 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcacgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773621 266 + 59248254 ACTTTGTGATCAGG-ttttttctg--gg-----------tttttttctggaaatggagtctcactgtgtcatgcaggctggagtccagtggctcgatctcggctcactgcaatctctgcctcccaggttctaagggatgtttctgccgcagcctccccaggtactgggactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878000 272 + 51301725 aCTTTGTGATCAGg-ttttttctgttgg-------tttttttttttctcaaaatggagtctcactgtgtcacgcaggctggagtccagtggcttgatctcggctcactgcaatctctgcctcccaggttctaaggGATGTTTCTGCCGCAGCCTCCCCAGGTACTGGGACTagtaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtcTCCCCAGGgtagccaggttggtctggaactcctaacctcaagtaatctgcctac i papAnu2.chr19 M 318 C 0 s chlSab2.chr6 47586306 277 + 50890351 ACTTTGTGATCAGG-TTttttctg--ttttttttttttttttttttctcaaaacggagtctcactgtgtcacgcaggctggagtccagtagcttgatctcggctcactgcaatctctgcctgctaggttctaagggatgtttctgccgcagcctccccaggtacgggaactactaggtgcccaccac--tatgcctggctaacttttgtgtttttagtacagat--agtctccccagggtagccaggttggtctggaactcctaacctcaagtaatctgcctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e ponAbe2.chr19 56822027 2 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I a score=401953.000000 s hg38.chr19_GL949753v2_alt 691394 183 + 796479 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACATTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc s panTro4.chr19 59893099 183 + 63644993 ctcggtctcctaaagtgctgggattacagctgtgaaccaccgcacctagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagttttgcccttgtcgcccaggctagagtgcaatggtgtgatctcggctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822029 183 + 60714840 ctcagtctcccaaagtgctgggattacaggtgtgaaccaccgcacccagccTGTGATAAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcgcccttgttgcccaggctggagtgcaatggtgtgatctcggctc i ponAbe2.chr19 I 2 C 0 s nomLeu3.chr10 103335638 183 - 106955855 ctcggtctcccaaagtgctgggattacaggtgtgaaccaccacacccagccTGTGATCAGTTTCAGATCAGCCTTGCTTACTC-CACGTTCCCTCTTATCTTCCTGGTAGCAtttttgttttttcttgagaaagagtttcacccttgtcgcccaggctggagtgcagaggtgtcatcttggctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60632906 180 + 64156825 ctgggtctcccaaagtgctaggattgcgggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcactggcgtgatcttggctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55773887 180 + 59248254 ctgggtctcccaaagtgctaggattacaggtgggagctaccacacccagccTGCGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcgcccaggctggagtgcaatggcgtgatcttggctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878272 180 + 51301725 ctgggtctcccaaagcgctaggattcgAGGTgggagctaccacacccagcctgtgatCAGTTTAAGATCAGCCTTGCTTACTTTCACGTTCCCTTTTATCTTCCTggtagcatttttgttttgtctt----cagaGTTTCTcccttgtcgcccaggccggagtgcaatggcgtgatcttggctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586583 180 + 50890351 ctgggtctcccaaagtgctaggattacaggtgtgagctaccacacccagccTGTGATCAGTTTAAGATCAGCCTTGCTTACTCTCATGTTCCCTTTTATCTTCCTGGTAGCAtttttgttttgtctt----cagagtttctcccttgtcacccaggctggagtgcaatggcgtgatcttggctc i chlSab2.chr6 C 0 I 2936 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=491456.000000 s hg38.chr19_GL949753v2_alt 691577 232 + 796479 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgttagttttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag s panTro4.chr19 59893282 228 + 63644993 gccacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcctgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttgtt----ttatttttagtag--acagggtttcaccatgttgggcaggctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgc-tgggattacaggcatgagccaccgtacctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822212 231 + 60714840 accacaacctccacctcccaggttcaagtgatt---ctgcctcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------atttttta---gtatttttagtagacacagagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctcccaaagtgc-tggaattacaggcatgagccaccgtacctag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103335821 235 - 106955855 accacaacctccacctcccaggttcaagtgatt---ctgccgcagcctcccgagtagctgggatcataggcgcccaccaccacatctggctaatttttgc------------------------------------attttttagttttatttttagtagacgcagggtttcaccatgttggccaggctggtcttgaactcctgagctcaggtgatccacccccctcggcctcccaaagcgcttgggattacaggcgtgagccaccgtgcctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633086 230 + 64156825 accacaacctccacctcccagattcaagcgattcttctgcctcagcctcccaagtagctgggattataggcgcccaccaccacaactgactaa-------------------------------------------ttttttttttttttttttgtgtagacatagggtctcaccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774067 273 + 59248254 accacaacctccacctcccagattcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttttcttttttttttttttcttctttttcttttttttttttttttttttttttttttgtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878452 250 + 51301725 accacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggtgcccaccaccacatctggctaagttttttttctttttctttt-----------------------tctttttttttttttttttagtagacatagggtctcgccgtgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589699 239 + 50890351 accacaatctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtagctgggattataggcgcccaccaccacatctggctaattttttttt----------------------------------tttttttttttttttttttagtagacatagggtctcgccatgtttgtcaggctggtctcaaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgc-taggattacaggtgtaagccactgtacctag i chlSab2.chr6 I 2936 C 0 e canFam3.chr1 20043410 1335 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=321473.000000 s hg38.chr19_GL949753v2_alt 691809 120 + 796479 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACACGGCCAATGTCATT s panTro4.chr19 59893510 120 + 63644993 ccCACATTGAC-TTTTGATACAGCAAGTA---------TTTCTTGCTATGGCTCTGTATAATAGAGATGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822443 118 + 60714840 ccCACATTGGC---TTGATACAGCAAGTA---------TTTCTTGTTATGGCTCTGTATGATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCCGGCCAATGTCATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336056 120 - 106955855 tcCACATTGAC-TTTTGATATAGCAAGTA---------TTTCTTGCTATGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACCTGGCCAATGTCATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633316 120 + 64156825 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACTTGGCCAATGTCATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774340 120 + 59248254 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTATGGCTCTGTAGAATACAGGTGAGTAACTTGGTTGAAGGAATTGTTTGCCCTGTTCATCTCTCTAGACGTGGCCAATGTCATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878702 120 + 51301725 cccaCATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGCAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589938 120 + 50890351 ccCACATTGAC-TTTTGATAGAGCAAGTA---------TTTCTTGTTACGGCTCTGTAGAATAGAGGTGAGTAACTTGGTTGAAGGAATCGTTTGCCCTGTTCATCTCTCTAGACATGGCCAATGTCATT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044745 127 - 122678785 cTCACATTGATTTTTTGATAGAGCAATTAGAACAAATGTTTATTGTTATAGTTCCACAGAGGAGAGGCATGTAACTTGGTTTAGAATGTCATTTGCTCTGTTCATCTCTATAAACCTATCTGTCGCC--- i canFam3.chr1 I 1335 C 0 e calJac3.chr22 45941225 398 + 49145316 I a score=14227.000000 s hg38.chr19_GL949753v2_alt 691929 9 + 796479 CCTGGCACA s panTro4.chr19 59893630 9 + 63644993 CCCGGCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822561 9 + 60714840 CCCAGCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336176 9 - 106955855 CCCAGCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633436 9 + 64156825 CCCAGCACA i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47590058 9 + 50890351 CCCAGCACA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20044872 9 - 122678785 CCTGCCACA i canFam3.chr1 C 0 I 62 e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=4114.000000 s hg38.chr19_GL949753v2_alt 691938 6 + 796479 CAAtc-----t s panTro4.chr19 59893639 6 + 63644993 CAATC-----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822570 11 + 60714840 CAATCtttttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336185 10 - 106955855 CAATC-ttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633445 6 + 64156825 CAATC-----T i rheMac3.chr19 C 0 I 1 s chlSab2.chr6 47590067 6 + 50890351 CAATC-----T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C a score=150209.000000 s hg38.chr19_GL949753v2_alt 691944 289 + 796479 ttttttttcttgagatggagtctcactctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagtcaggatggtctggatctcctaacctcgtgatccgtccgcctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccag s panTro4.chr19 59893645 289 + 63644993 ttttttttcttgagatggagtctcgctctgttgcccagactggagtgcagtggtgcaatcttggcccactgcaacctctgctacccaggttcaagcgattctcctgcctcagcctcccaaatagctgggagtacaggtgtgtgccaccacgcccagctaattttttgtattttagtagagacagggtttcaccgtgttagccaggatggtctggatctcctaacctcgtgatccgcccgccgtggcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822581 289 + 60714840 tttttttttttgagacggagtcttgctctgtcacccagactggagtgcagtggtgcaatcttggcccactgcaacctctgccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacacccagctgattttttgtattttagtagagacggggtttcaccgtgttagccaagatggtctcaatctcctaacctcgtcatctgtccacctcagcctcccaaagtgctgggatgacaggcgtgagccactgtgcccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336195 289 - 106955855 tttttttttttgagacagagtcttgctctgtcgcccagactggagtgcagtggtgcaatgttggcccactgcaacttctaccacccaggttcaagcgattctcctgcctcagcctcccaagtagctgggagtacaggcgtgtgccaccacgcccagctaattttttgtattttagtagagacggggtttcaccgtgttagccaggatggtctcaatctcctaacctcgtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgatccaccgtgcccgg i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e papAnu2.chr19 47878822 0 + 51301725 C e macFas5.chr19 55774460 0 + 59248254 C e rheMac3.chr19 60633451 1 + 64156825 I a score=18578.000000 s hg38.chr19_GL949753v2_alt 692233 15 + 796479 ccTAGCACACAATCT s panTro4.chr19 59893934 15 + 63644993 ccTAGCACACAATCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822870 15 + 60714840 ccTAACACACAGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336484 15 - 106955855 ccTAGCACACAACCT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774460 15 + 59248254 CCCAGCACACAATCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878822 15 + 51301725 CCCAGCACACAATCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e chlSab2.chr6 47590073 0 + 50890351 C e rheMac3.chr19 60633451 1 + 64156825 I a score=1179.000000 s hg38.chr19_GL949753v2_alt 692248 1 + 796479 T s panTro4.chr19 59893949 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822885 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336499 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774475 1 + 59248254 C i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878837 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590073 1 + 50890351 T i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633451 1 + 64156825 I a score=197263.000000 s hg38.chr19_GL949753v2_alt 692249 92 + 796479 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA s panTro4.chr19 59893950 92 + 63644993 GACAAAGAATTTCGGTGCGACTTGGGGTACTGTGGTGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAATAGTGCCTGGTGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822886 92 + 60714840 GTCAAAGAATTCCAGTGCGACTTGGGGTACTGTGGAGCCTGCTCTATCATCATGCTTCAGCA------GGAAATGTGGGTGAACAGTGCCTGGTGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336500 92 - 106955855 GACAAAGAATTCCGGTGCGACTTGGGGCACTGTGGAGCCTGCTCCATCATCATGCTTCAGCG------GGAAATGTGGATGAACAGTGCctggtggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60633452 91 + 64156825 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAATAGTGCTTggtggca i rheMac3.chr19 I 1 I 3 s macFas5.chr19 55774476 91 + 59248254 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGggtgactagtgcttggtggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878838 97 + 51301725 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCAGGAAATGGAAATGGGGGTGAATAGTGCTTGGTGGCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590074 91 + 50890351 GACAAAGAATTCCAGTGAGACTGGGGGCACTGTGGAGCCTGCTGTCT-GTCATGCTTCAGCA------GGAAATGGGGGTGAACAGTGCTTggtggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I a score=3075.000000 s hg38.chr19_GL949753v2_alt 692341 3 + 796479 TGG s panTro4.chr19 59894042 3 + 63644993 TGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822978 3 + 60714840 TGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336592 3 - 106955855 tgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55774567 3 + 59248254 cga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878935 3 + 51301725 CGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590165 3 + 50890351 cga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e rheMac3.chr19 60633543 3 + 64156825 I a score=9292.000000 s hg38.chr19_GL949753v2_alt 692344 12 + 796479 CAGGTAAAGAAA s panTro4.chr19 59894045 12 + 63644993 CAGGTAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822981 12 + 60714840 TGGGTAAGGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103336595 12 - 106955855 tgggtaaagaaa i nomLeu3.chr10 C 0 I 608 s chlSab2.chr6 47590168 12 + 50890351 cgggtaaagaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 692356 1 + 796479 T s panTro4.chr19 59894057 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822993 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47590180 1 + 50890351 t i chlSab2.chr6 C 0 T 3383 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=77455.000000 s hg38.chr19_GL949753v2_alt 692357 298 + 796479 Gttttgttttgtttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcaatctcggctcactgcaagctccatctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccggctaattttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG s panTro4.chr19 59894058 296 + 63644993 Gtttttgttt--ttttttttttgagacagtcttgctctgtcacccaagctggagtgcagtggcgcgatctcggctcactgcaagctccgtctcccgggttcacgccatt---ctgcctcagcctccccagtagctgggactacaggcgcctgccacacgcccggctaaatttttgtatttgtagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgaccttatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56822994 299 + 60714840 Gttttttttt--ttttttttttgagacagtcttgctctgtcgcccaggctggagtgcagtggcgcaatctcagatcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctccccagtagctgggactacaggcgcccgccacacgcccagctagttttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgaccttgtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccG i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T e papAnu2.chr19 47878938 0 + 51301725 C e macFas5.chr19 55774570 0 + 59248254 C e rheMac3.chr19 60633543 3 + 64156825 I a score=481905.000000 s hg38.chr19_GL949753v2_alt 692655 387 + 796479 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattggcagagagaccccagcgggcaggttgtcatgag--tagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcggtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcatgcctgcaatcccagcactttgggaggctgaggtg s panTro4.chr19 59894354 389 + 63644993 Cgggtaaagaaatttatgaagacaatcgtaggtaaaggaaggcagatttattggagaaagtaggaaaagacattagcagagagactccagcgggcaggttgtcatgagagtagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaagtgtttgataaactgaggcgtttcatggcaaacagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccg-tatctcctggaccataaaagcagacctggcccagtgcagtggttcacgcctgtaatcccagcactttgggaggctgaggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56823293 390 + 60714840 CAggtaaagaaatttatgaagacaatcgtaggtaaacaaaggcagatttattggagaaagtaggaaaagacattggcagagagaccacagcaggcaggttgtcatgagagaagctcactgccaggagaccaaagcttcctgcagattttatagaatagggcttgggctgattgataat-----gtcaacagggggtttaacttgcagtcttctttcagcagaggtgtttgataaactgaggcgtttcatggcaagcagggagtttgtg---agctctgtgtgtgatctggccaggaaggccaaacatcttgggccgtTATCTCCTGGACCATAAAAGCAGACCTggcccagtgcagtggttcatgcctgtaatcccagcacttagggaggccgaggtg i ponAbe2.chr19 C 0 I 521 s rheMac3.chr19 60633546 392 + 64156825 cgggtaaagaaatttatcaagacaatcgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i rheMac3.chr19 I 3 C 0 s macFas5.chr19 55774570 392 + 59248254 cgggtaaagaaatttatcaagacaattgtatgtaaagaaaggcagatttattggagaaagtaggagaagacattggc----agaccacagcaggcaggctgtcacgggagaaactcactgccaggagaccacagcttcctgcagattttatagaatagggcttgggctgattgataaggtcaagtcaacaggcggtttaacttgccatcttccttcagcagacatgtttgataaactgaggcgtttcatggcaagcagggagtttgtgagcagctgtgtgtgtgatctggtcaggaaggctaaacatcttggacca-tatctcctggaccataaaagcagacctggcccggcacagtggttcaca-ctgtaatcccagcactttgggaggctgaggtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47878938 393 + 51301725 CGGGTAAAGAAATTTATCAAGACAATcataggtaaagaaaggcagatttattggAGAAAGTAGGAGAAGACATTGGC----AGACCACAGCAGGCAGGCTGTCACGAGAGAAGCTCACTGCCAGGAGACCACAGCTTCCTGCAGATTTTATAGAATAGGGCTTGGGCTGATTGATAAGGTCAAGTCAACAGGCGGTTTAACTTGCCATCTTCCTTCAGCAGACGTGTTTGATAAACTGAGGCGTTTCATGGCAAGCAGGGAGTTTGTGAGCAGCTGTGTGTGTGATCTGGTCAGGAAGGCTAAACATCTTGGACCA-TATCTCCTGGACCATAGAAGCAGACCTGGCccggcgcagtggttcacacctgtaatcccagcactttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=194839.000000 s hg38.chr19_GL949753v2_alt 693042 234 + 796479 ggtggatcatctgaggtcagcagttttagactggcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttacttgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- s panTro4.chr19 59894743 234 + 63644993 ggtggatcacctgaggtcagcagttctagactggcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagcctagacgcagtggcacatgcctgtaattccagttactcgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcaacagagtgagactgtctcaaacaga---------- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60633938 241 + 64156825 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctataattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55774962 241 + 59248254 ggtggatcacctgaggtcagtagttctagaccggcctggccaacatgacgaaaccccgtctctactaaaaatacaaaaattagcc-agacgcagtggcgcatgtctgtaattccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgcgccactgcattccagcctgggcaac--agtgagactgtctcaaaaaaaaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879331 240 + 51301725 ggtggatcacctgaagtcagtagttctagaccggcctggccaacatgacgaaaccctgtctctactaaaaatacaaaaattagcc-cgacgcagtggctcatgtctgtaatcccagctactcgggaggccgaggcaggagaatcacttgaacccgggaggcggaggttgtagtgagccaagattgccccactgcactccagcctgggcaac--agtgagactgtctc-aaaaaaaaaaaaaaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I e chlSab2.chr6 47590181 3383 + 50890351 T a score=74384.000000 s hg38.chr19_GL949753v2_alt 693276 70 + 796479 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta s panTro4.chr19 59894977 70 + 63644993 cctatagctgacctgtttcctcttgtttgtatgccctgaaccatggaggaaagcttatttatttatttta i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60634179 62 + 64156825 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775203 62 + 59248254 cctatagctgacctgtttcctcttgtttgtatgttctaaaccatggaagaaagcttgttttt-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879571 62 + 51301725 cctgtagctGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586798 62 + 50890351 CCTATAGCTGACCTGTTTCCTCTTGTTTGTATGTTCTAAACCATGGAAGAAAGCttgtttta-------- i chlSab2.chr6 T 3383 C 0 e canFam3.chr1 20044881 62 - 122678785 I e ponAbe2.chr19 56823683 521 + 60714840 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=150873.000000 s hg38.chr19_GL949753v2_alt 693346 120 + 796479 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgcgatctcttactacaacctccatctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga s panTro4.chr19 59895047 120 + 63644993 ttgag--atggagtcttgctttgttgcccagggtggagtgcagtagtgcgatctcttactacaacctgcacctcccaggttcaagcaattctcgagcctcttggcctcccaagtagctgaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824204 120 + 60714840 ttgag--atggagtcttgctctgttgcccagggtggagtgcagtagtgtgatctcttactgcaacctccacctcccaggttcaagcaattctcgagcctctcggcctcccaagtagctgaga i ponAbe2.chr19 I 521 C 0 s rheMac3.chr19 60634241 86 + 64156825 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcagcctcccaagtagctg--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775265 86 + 59248254 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaac-------------------------ctcgcgtctctcaacctcccaagtagctg--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879633 111 + 51301725 ttgag--atggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcacgcctctcagcctcccaagtagctg--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47586860 113 + 50890351 ttgagatatggagtattgctctgttgcccaggctggagcgctg------gatctcttactgcaacctccacctcccaggttcaagcaattctcgcacctctcagcctcccaagtagctg--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I e calJac3.chr22 45941225 398 + 49145316 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=116766.000000 s hg38.chr19_GL949753v2_alt 693466 64 + 796479 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- s panTro4.chr19 59895167 64 + 63644993 ttacaggcatgcgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824324 64 + 60714840 ttacaggcgtgtgccaccacgcctggctaatttttgcatttttagtagagatggggtttctgtg-- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60634327 55 + 64156825 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i rheMac3.chr19 C 0 I 2 s macFas5.chr19 55775351 55 + 59248254 ---------tgtaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47879744 55 + 51301725 ---------tgcaccactacgcctggctactttttgcatttttggtaaagacggggtttctctg-- i papAnu2.chr19 C 0 I 2 s chlSab2.chr6 47586973 55 + 50890351 ---------tgcaccactacgcctggctactttttgcatttttagtaaagacggggtttctctg-- i chlSab2.chr6 C 0 I 2 s calJac3.chr22 45941623 66 + 49145316 ttaaaggctcacaccaccacacttggctaatttttgtatttttagtagatatggagtttctccatg i calJac3.chr22 I 398 C 0 e canFam3.chr1 20044881 62 - 122678785 I e nomLeu3.chr10 103336607 608 - 106955855 I a score=465551.000000 s hg38.chr19_GL949753v2_alt 693530 196 + 796479 ttggccaggctggtctcgaactcctgagctcaagtgatccaccccacctcagcctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgtgccccc-----cctcccccccgccccatcagcctgcctccttttctctaattgggactccac s panTro4.chr19 59895231 200 + 63644993 ttggccaggctggtctcgaactcctgagctcaagtgatccaccc-acctcagcctcccaaagttctgggattataggcatgaac-----caccacacctggccggaaaacacatttgtagcttatttgctttatctgatcccgcgccccctgccccccccccccacccccatcagcctgcctccttttctctaattgggactccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824388 185 + 60714840 ttggccaggctggtctccaactcctgagctcaagtgatccaccc-acctcagtctcccaaagttctgggattataggcatgagc-----caccacacctggccggaaaacatatttgtagcttatttgctttatctgatt---------------ctcgccccccgccccatcagcctgactccttttctctaattgggactccac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337215 186 - 106955855 ttggccagggtggtctcgaactcctgagctcaagtgatccgccc-acctcagccttccaaagtgctgggattataggcatgagc-----caccacgcctggccAGaaaacatatttgtagcttgtttgctttatctgtttt--------------ctcccccggggtcctgtcagcctgactccttttccctaattgggactccac i nomLeu3.chr10 I 608 C 0 s rheMac3.chr19 60634384 184 + 64156825 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i rheMac3.chr19 I 2 C 0 s macFas5.chr19 55775408 184 + 59248254 ttggccaggctggtctggagctcctgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagc-----cgtcacacctggccggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcattgggactccac i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47879801 184 + 51301725 ttggccaggctggtctggaactcctgagctcaagtgatccgccc-acctcagcttcccaaagggctgggattagagacatgagc-----cgTCACACCTGGCCGGAAAACATACTTGTAGCTCACTTGCTTTATCTGTT----------------TCTCCAGCTGGTCCTGGTAGCTTCACTCCTTTTCCCTCATTGGAACTCCAC i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47587030 189 + 50890351 ttggccaggctggtctggaactcccgagctcaagtgatccgccc-acctcagcttcccaaagtgctgggattagagacatgagcACTTTAGTCACACCTGGCTggaaaacatatttgtagctcacttgctttatctgtt----------------tctccagctggtcctgtcagcttcactccttttccctcactgggactccac i chlSab2.chr6 I 2 C 0 s calJac3.chr22 45941689 180 + 49145316 ttggccaggctggtctcgaactccggagctcaagtgatctgccc-acctcggcctccgaaaatattgggattataggcatgagc-----cactgcaccGAGCTggaagac--atttataacttatttgctctatctgt-----------------tgccctctgggtcctgtcagc-tgactccttttccctgtttgggactccac i calJac3.chr22 C 0 C 0 e canFam3.chr1 20044881 62 - 122678785 I a score=569806.000000 s hg38.chr19_GL949753v2_alt 693726 213 + 796479 aGGAAATACACCTGATTTTGTGTCAATCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGATTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCATT------------TAT s panTro4.chr19 59895431 213 + 63644993 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTCCAGAAACG---AAA---GGAAATGTCATCTGCCTGGGTAAA------GACGTCT------TTAAAGGAAAAAAGCCAGGTCTGTACCATATCTTCCTGCAGGG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCATT------------TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824573 220 + 60714840 GGGAAATACACCTGATTTTGTGTCACGCTCACATGAGTTTGTATTTTGTAGCATTTACAGAAACC---AAAGAGGGAAATGTCACCTGCCTGGGTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ATTTTCCTATGTAACACAAAGCATTtat--------gtat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337401 212 - 106955855 aGGAAATACACCTGATTTTGTGTCAAGCTCACATGAGTTTGTATTTTGTAGCGTTTACAGAAACG---GAG---GAAGATGTCACCTGCCTGACTAAA------GAAGTCT------TTAAAGGAGAAAAGCCAGGTCTGTACCATATCTTCCTGCAGTG---AGCTTGGGATCAAGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTGACACAAAGCAT-------------TAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634568 228 + 64156825 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtacgtgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775592 228 + 59248254 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCGCCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGCCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47879985 228 + 51301725 AGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGTCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACCGTATCTTCCTGCAGTG---AGGTTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAgcgtttatgtatgtatgtat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587219 228 + 50890351 aGGAAATACACCTGATTTTGTGTCACGTTCACATGAGTTTGTATTTTGTAGAGTGCACAGAAACA---GAG---GAAGACGCCACCGTCCTGACT---------GAAGTCTTCAAAGTCAAAGGAGAAAAGTCAGGTCTGTACTATATCTTCCTGCAGTG---AGGCTGGGATCAGGTTTCTCTTTATAAACTTGAAGTCCTCTTA--ACTTTCCTATGTAACACAAAGCGtgtatgtatgtatgtat i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45941869 196 + 49145316 aGGAAATTCACCTGTTTTTGTGTCAAGCTTACATGAGTTTGTACTTTTTCGCGTTTACAGAAACA---GAG---GAAGATGTCAGCAGCCTGAGAGAAGC---TGAAGCCT------TGAAAAAAGAAATGCCAGGTCTGTATCCTGTCTTCCTGGGGTGAGCAGCTTGGGGTCAGGTTTCGCTTTCTAAACTTCAAGTCCttttt--ttttt----------------------------------- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20044943 215 - 122678785 AAGAAATTCACAT--TTTTGTGTCATGCTCACTTTAATTTGTATTTTGCAGCATTTACACAAGTACAGGAA---GAAGATGTCACAAATCCAGAAGAAGCAAAGGAAGGTT------TGAAAGGAGAAAAGCCAGGTCTGTATCCTATCTTCCTGGA-TG---AGCTTAGTGTCAGGTAGTTCTTGATAACTT-----CTCTATTATCATGTTCTTACTTGACAC-AGGTATTTTT------------ i canFam3.chr1 I 62 C 0 a score=844500.000000 s hg38.chr19_GL949753v2_alt 693939 324 + 796479 TTATGTATGTATGT----Atcgagacggagttttgctcttgttgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tatttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaatgtcaggtgatctgcctgcctcgacctcccaaagggctgggattacaggcatgagccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG s panTro4.chr19 59895644 324 + 63644993 TTATGTATGTATGT----ATCgagacggagttttgctcttgttgcccaggctggagtgccatggcgtgatctcgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccatgactggctaattttt-tgtttttagtagagacaaggtttctttatgttggtcaggctggtgttgaactcccaatgtcaggtgatgtgcctgcctcgacctcccaaagggctgggattacaggcatgggccactgtgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56824793 324 + 60714840 gtatgtatgtatgt----atCgagacggagttttgctcttgttgtccaggctggagtgccgtggcatgatcttgactcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctggaattacaggcctgcgccaccatgaccggctaattttt-aatttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaatgtcaggtgatctgcctgcctcggcctcccaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337613 324 - 106955855 TGATGTATGTATGT----ATCgagatggagtttcgctcttattgcccaggctggagtgccgtggcgtgatctcgactcactgcaacctctgcctcccaggttcaagcgattcgcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgaccggctaatgttt-tatttttagcagagacaaggtttcttcatgttggtcaggtcggtcttgaactcccaacctcaggtgatctgcctgcctcagcctccgaaagggctgggattacaggcatgagccaccgcgcccggcc---------------------------AACACAAGGCATTTTGTTATTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60634796 319 + 64156825 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagcccccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55775820 319 + 59248254 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgttcactgcaacctccgtctcccaggttcaagcaatt---ctgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGACATTTTGTTGTTCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880213 323 + 51301725 gtatatatgtatgtatgcattgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtcttccaggttcaagcaatt---gtgcctcagcctcccaagtagctgggaatacaggtgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtgttgaactcccaacctcaggtgatcggcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------aacacaaGGCATTTTGTTGTTCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587447 319 + 50890351 gtatatatgtatgt----attgagacacagtttcactcttgttgcccaggctggagtgccatggcatgatctctgctcactgcaacctccgtctcccaggttcaagcaatt---gtgcctcagcctcccgagtagctgggaatacaggcgtgctccaccacacccagctaacttat---tttttagtagagacaaggtttcttcatgttggtcaggctggtcttgaactcccaacctcaggtgatctgcctgcctcggcctcccaaagggctgggattacaagtgtgagccaccgcgcccagcc---------------------------AACACAAGGCATTTTGTTGTTCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942065 321 + 49145316 -------------t----a-----atggagtctcactc-tgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcctgggttcaaagaattct-ctgcctcagcctcccaagaagctgggactataggc--gcaccaccacgcccagctaatttttgtatttttagtagaggtggggtttcgccatgttggtcaggctggtcttgaacttctgaccc---gtgaactgcccgcctccgcctcccaacgtgctgggattacaggtgtgagccgccgcactcggccTCAAGTCCTCTTTTTACGCTCCTGTGTAACGGAAAGCA------TGCTTTGT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20045158 0 - 122678785 C a score=980283.000000 s hg38.chr19_GL949753v2_alt 694263 305 + 796479 TTTTCCCTATGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC s panTro4.chr19 59895968 305 + 63644993 TTTTCCCTGTGGGTAACTGATTGCATC----CTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCAAGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825117 309 + 60714840 TTTTCCCTATGGGTAACTGATTGCATCCTCTCTCTCTCCCTTCCCTCCTCACCAATGATAAAGACAAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGAGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCATACACGGTGGTGCTGTATGGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCCAGAAACTAATGCTAGACTGGGCAGAGGACAACCTCATCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103337937 302 - 106955855 TTTTCCCTATGGGTAACTGATTGCATCCTCTGTCTCTCCCTTCCCTCCTCACCAATGAT------AAAGACAATAGGTACAGGTATATATTGAAGACGAAGTTCCGGGAGATGTGGAAGAG------CTGGCCTGGCGATAGCAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCCTACACGGTGGTGCTGCACGGTCCTGCA-GCCTTGGGAAAACCACGCTGGGCCCAGAAACTAATGCTAGACT-GGCAGAGGACAACCTCACCC i nomLeu3.chr10 C 0 M 100 s rheMac3.chr19 60635115 297 + 64156825 TTTTCCCTATGGATAACTGATTACATC------CTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGCTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGATGACCTCATCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776139 299 + 59248254 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880536 299 + 51301725 TTTTCCCTATGGATAACTGATTacatc----ctctctcccttccctcctcaccAAAGAT------AACGAGGATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACAGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47587766 299 + 50890351 TTTTCCCTATGGATAACTGATTACATC----CTCTCTCCCTTCCCTCCTCACCAAAGAT------AACGAGAATAGGTACAGGCTTATACTGAAGACGAAGTTCCGGGAGATGTGGCAGAG------CTGGCCTGGAGACAGCAAAGAGGTCCATGTTATGGCTGAGAGATACAGGATGCTGATCCCATTCAGCAACCCCAGGGTGCTTCCCGGGCCCTTCTCACACACCGTGGTGCTGCACAGTCCTGCAGGCCTTGGGAAAACCACGCT-GGCCAATAAACTAATGCTGGACTGGACAGAGGACAACCTCATCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942386 301 + 49145316 TTTTTGCTGTGAATTACCAATTGCATC--TTGTCTATTCCTTCCCTCCCCACTGAAGGG------AAAGAGGACAGGCACAGGAGCATACTGAAGATGAAGTTCCGGCAGATGTGGGAGGC------CTGGCCCGGAGCCAGCAGAGGGGTCCAAGCTGTGGCTCAGAGATACATGACTCTGATCCCATTCAGCAACCCCAGGATACTTCCCGGGCCCTTCCCACACACGGTGGTGCTCCACGGCCCTGCCGGCCTTGGGAAAACCACGCT-GGCCAAGAGATTAATGTTGGACTGGACAGAGGACAACCTCAGCC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045158 305 - 122678785 TTTTCCTAATGAATAACCAGCTATATC----CTATTTCCAACCTCTTATCACTGAAGGT------AAACAAGATAAGTATATAAGTATATTGAAAGAGAAGGTCCAGCAAATGTGGAAGAAGAACTTTTGGCCTGGAGCCAGTGAAAACATTCACACTGTCACCCAGAAATATGAGACACTGATCCCATTCTGTAATCCTAAAATGCTTGCAGGACCATTTCCACACACGGTGGTGCTGCATGGTCCTGCGGGCGTTGGGAAGACCACTCT-GGCCAAGAAGTGCATGCTGGACTGGACAGAGGACAGCCTTGCAC i canFam3.chr1 C 0 C 0 a score=281822.000000 s hg38.chr19_GL949753v2_alt 694568 92 + 796479 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- s panTro4.chr19 59896273 92 + 63644993 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825426 92 + 60714840 ACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGCTCGGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3649680 90 + 106955855 ACGG--TCAGATACGCGTTCTACCTCAGCTGCAAGGAGCTCAGCCGCATGGGCCCCTGCAGTTTTGCAGAG---CTGATCTCCAAAGACTGGCCT- i nomLeu3.chr10 I 31972 I 1248 s rheMac3.chr19 60635412 92 + 64156825 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776438 92 + 59248254 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCACAG---ATGGTCTTCAGGGACTGGCCT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880835 92 + 51301725 AGAAATTCAAATATGCATTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588065 92 + 50890351 AGAAATTCAAATACGCTTTCTACCTCAGCTGCAGGGAGCTCAGCCGCCTGGGCCCGTGCAGTTTTGCAGAG---ATGGTCTTCAGGGACTGGCCG- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942687 92 + 49145316 ACAAATTCAAATACGCTTTCTACCTCAGCTGCAAAAGGCTCAGCCGCCTGGGCCTGTGCAGTTTTGCAGAG---CTGGTCTTCAGGGACTGGCCG- i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045463 92 - 122678785 AGACCTGCCCCACTGCCTTCTATCTCAGCTGCAAGGCGCTCAGCCGCAAGGGGATGTGCTCCTTCATAGAACTCCTGGCCC----AGAGTGCCCCA i canFam3.chr1 C 0 C 0 a score=4250211.000000 s hg38.chr19_GL949753v2_alt 694660 1266 + 796479 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATCTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGTTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTTCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACACCCTGGAGAAGGAGGAGGAAGAGGA--------TAGGGACGGCCACACCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT s panTro4.chr19 59896365 1266 + 63644993 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACGGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCGCACCTGG------GGCGCTGATCGAGGACATTTGCGGGGACTGGGAGAAGAAGAAGCCGGTGCCCGTCCTCCTGGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCCGATCTACGTAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCGAGCCATGCGTGCCTTTGAGCTAATGAGGAGCAACGCGGACCTGTTCCAGCGGGGCTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGTGCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGACGCTGAGCCTCCTGGCCGCGCAGGGCCTGTGGGCGCAGACGTCCGTGCTCCACCGAGAGGATCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCCCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACACCTCGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTACTTCGGCCTCGCTAACGAGAAGAGAGCCAAGGAGTTGGAGGCCACTTTTGGCTGCCGGATGTCACCGGACATCAAACAGGAATTGCTGCGATGCGACATAAG---CTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAGGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGCGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTAAT---AAAGGAGAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCCGAGGTTGAGAGGTGAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56825518 1266 + 60714840 GAATTGCAGGATGACATTCCACACATCCTAGCTCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCTGCACCTGG------GGCGCTGATCCAGGACATGTGCAGGGACTGGGAGAAGAAGAAGCCGGTGCCTGTCCTCCTGGGGAGTTTGCTGAACAGGTATATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCACTGAGGGACCTCCGGTTCCTGGTGGAGGAGCCAATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGGTCGGCCCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACACGGCCCCCACCTGCCTCACCCGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGTGGATGCTGAGCTTTCTGGCCGCGCAGGGCCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCAGGGTGCAGGAGTCCGACCTCCGTCTGTTCCTGGACGGAGACATCCTCCGCCAGGACACAGTCTCCAAAGGCTGCTACTCCTTCATTCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGACATACAGAAGCTGCTTTCCGGAGAAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGATACTACTCCTTTGGCCTCGCTAACGAGAAGAGAGCTAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATATCACCGGACATCAAACAGGAATTGCTGCAATGCGACATAAG---TTGTAAGGGTG---GACA---TTCAACGGTGACAGACCTGAAGGAGCTCCTTGGCTGTCTGTACGAGTCTCAGGAGGAAGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTTTGCCTCAAGCACTGTCAAAACCTGCAGAAAATGTCACTGCAGGTAAT---ACAGGCAAATCTCCCGGAGAATGTCACTGCGTCTGAATCAGACGCTGAGGTTGAGAGGTAAGAACCGT-----TTCACTCTACCAG-----TCGTTCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103338339 1266 - 106955855 GAATTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGCTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGATTGGGAGAAGAAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAGTATGTTACCCAAGGCCGGCCTGCTGGTCACCACGCGGTCCCGGGCCCTGAGGGATCTCCGGCTCCTGGCAGAGGAGCCGATCTACATAAGGGTGGAGGGCTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCCCCGGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGCGAGGACCTGGCCCCCACCTGCCTCACCCGCACGGAGCTGTTCCTGCGCTTCCTCTGCAGCCGGTT------CCCGCAGGGCG------------CACAGCTGCGGGGCGCGCTGCGGAAGCTGAGCCTCCTGGCCGCGCAGGGGCTGTGGGCGCAGATGTCTGTGCTCCACCGAGAGGACCTGGAAAGGCTCGGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACGGACACATCCTCCGCCAGGACACAGTCTCGAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCGCTGCGCTGTTCTATGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCACGCCTGGGACATTGGGGACGTACAGAAGCTGCTTTCCGGAGGAGAAAGACTGAGGAACCCCGACCTGATTCAAGCAGGATACTACTCCTTCGGCCTCGCTAATGAGAGGAGAGCCAAGGAGCTGGAGGCCACTTTTGGCTGCCGGATTTCACCAGACATCAAACAGGAATTGCTGCGATGCGACGTAAG---TTGTAAGGGTG---GACA---TTCAACGATGACAGACCTGAAGGAGCTCCTCGGCTGTCTGTACGAGTCTCAGGAGGAGGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACGTTGTGCCATCTTCATTCTGTGTCAAGCACTGTCGAAACCTGCAGAAAATGTCACTGCAGGTCAT---AAAGGCGGAGCTCCCAGAGAATGTCACTGTGTCTGAATCAGACGCTGAGGCTGAGAGGTAAGAACCGT-----TTCAGTTTACCAG-----TGGTTCCATAttt i nomLeu3.chr10 M 100 I 819 s rheMac3.chr19 60635504 1261 + 64156825 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACATAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCATGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGAGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggaggaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCGAAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGGTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACTGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55776530 1261 + 59248254 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGATGACGACCAAGCCATGCGTGCCTTTGAGCTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCCGTGTGCTGGATCGTGTGTACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCCGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAAACATCCTCCGCCAGGACGGAGTCGCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGGCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACGTAAG---TCGTAAGAATG---GACA---TTTCACGGCGGCAGACCTGAGGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCTTCATTCTGCTTCAAGCACTGTCAAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAACGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACCGG-----TCGTTT------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47880927 1258 + 51301725 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCTTGTTTGTGATTGACGGTTTTGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCAGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAACCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCGTGGCAGAGCAGCCGATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGGGCTGTTCCTGCGCTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGCGCGCTGCGGGCGCTGAGCCTCCTGGCCGCGCAGGGTTTGTGGGCGCAGATGTCCGTGCTCCACGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCttcatccacctcagcttccagcaGTTTCTCACTGCGCTGTTCTACGccctggaga---aggaggaggagga--------cagggacGGCCATGCCTGGGACATTGGGAACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTGTTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTGCGATGCGACATAAG---TCGTAAGAATG---GACA---TTCCACGGTGGCGGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCGTCATCATTCTGCTTCAAGCACTGTCCAAACTTGGAGAAAATGTCACTGCAGGTGATAAGAAAGGAGACGCTCCCGGAGAATGTCGCTGCGTCTGAATCCAATGCTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47588157 1261 + 50890351 GAACTGCAGGATGACATTCCACACATCCTAGCCCAAGCACAGAAAATCCTGTTCGTGATTGACGGTTTCGATGAGCTGGGAGCCCCACCTGG------GGCGCTGATCCAGGACATCTGCGGGGACTGGGAGCAGCAGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCAAACCTGCTGGTCACCACGCGGCCCAGGGCCCTGAGGGACCTCCGGTTCCTGGCAGAGCAGCCAATCTACATAAGGGTGGAGGGGTTCCTGGAGTCGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGAGGAGGACCAAGCCATGCGTGCCTTTGAGTTGATGAGGAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATCGTGTGCACGACTCTGAAGCTGCAGATGGAGAAGGGGGAGGACCCGGCCCCCACCTGCCTCACCAGCACGGAGCTGTTCCTGCGTTTCCTCTGCAGCCAGTT------CCCGCAGGGCG------------CACAGCTCTGGGGTGCGCTGCGGGCGCTGAGCCTCCTGGCCGCACAGAGTTTGTGGGCGCAGATGTCCGTGCTCCATGGAGAGGACCTGGAAAGCGCTGGGGTGCAGGAGTCCGACCTCCGCCTGTTCCTGGACAGAGACATCCTCCGCCAGGACAGAGTCTCCAAAGGCTGCTACTCCTTCATCCACCTCAGCTTCCAGCAGTTTCTCACTGCGCTGTTCTACGCCCTggagaaggaggaggaggagga--------CAGGGACGGCCATGCCTGGGACATTGGGGACGTGCAGAAGCTGCTTTCCAGAGAAGAAAGACTCAAGAACCCCGACCTGATCCAGGCAGGACGCTTCTTATTCGGCCTGGCTAATGAGAAGAGAGTCAAGGAGTTGGAGGCCACCTTTGGCTGCCGGATGTCACCAGAGATCAAACAGGAATTGCTACAATGCGACATAAG---CCGTAAGAATG---GACA---TTCCACGGTGGCAGACCTGAAGGAGCTCCTCTGCTGTCTGTACGAGTCTCAGGAGGACGAGCTGGTGAAGGAGGTGATGGCTCAGTTCAAAGAAATATCCCTGCACTT---AAATGCAGTAGACATTGCGCCATCTTCATTCTGCTTCAAGCACTGTCCAAACTTGCAGAAAATGTCACTGCAGGTGATAAAAAAGGAGACGCTCCCGGAGAATGTCGCTGCATCTGAATCCAACACTGAGGCTGAGAGGTAGGAACC-T-----TTCACTCGACTGG-----TCGTTT------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45942779 1266 + 49145316 GAATTGCAGGGTGACGTTCCAGACATCCTCGCCCAAGCACAGAAAATCCTGTTCGTGGTCGACGGCCTCGATGAGCTGGGAGCCCCACCCGG------GGCGCTGATCCACGACATCTGCGGGGACTGGCTGAAGCCGAAGCCGGTGCCGGTCCTCCTGGGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGTCCTGGGCCCTGAGGGACCTCCGGCCCCTGATGGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGACACACTTTGGAGAGGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGAAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCCGCGGTGTGCTGGATGGTGTGCACGAGTCTGAAGCTGCAGATGGAGAATGGGGAGGACCCGGCCACCACCTGCCACACCCGCACGGGGCTGTTCCTGCACTTTCTCTGCAGCCGCTT------CCCGAAGGGTG------------CACAGCTCGGGGGCACGCTGCGGGCGCTGAGCATCCTGGCTGCGCAGGGCCTGTGGGCGCAGATGTCCGTGTTCCACAGAGAGGACCTGGAGAGCTTCAGGGTGCAGGAGTCCGACCTCCGCCCGTTCCTGGACAGAGGCATCCTCCGCCAGGATAGAGACTCTAAAGACTGCTACTCCTTCCTCCACCTCAGCTTCCAGCAGTTTTTCACTGCGCTGTTCTACGCCCTGGAGA---AGGAGGAGGAGGA--------CAGGGACGGCCACGCCTGGGACATTGGGGATGTGCAGAGGCTGCTCTCTGGAGAAGAAAGAGTCCAGAACCCCGACCTGATCCAAGCGGGACACTTCTTATTCGGCCTTGCCAACGAGAAGAGAGCCGCGGAGTTGGAGACCACTTTCGGCTGCGTGATGTCACGGGAGATCAAACAGGAACTGCTGCGGTGCGACATCAT---TTGTGAGGAGGACAGATA---CTCAACCTTGACGGACCTGAAGGAGGTCTTACACTGTCTGTACGAGTCTCAGGAGGGGGAGCTGGTGAAGGCGGTGATGGCCCCGTTGAAAGAAATATCCGTGCACTT---AAGCGCTGCAGACATTGTGCCCTCTTCCTTCTGCCTCAAGCATTGTCGGAACTTGGAGAAAATGTCACTGCAGGTGAT---AAAGGCAAAGCTCCCGGAGAATGTCACTGCCTCTGAATCAGATGCTGAGGCTGAGAGGTAAGAACCGT-----TTCTCTCCACTGG-----TCCTTCCGTCTTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20045555 1308 - 122678785 GACCTGCAGGATGCCCTTGCACAGGTCCTGACCCAGGCACAGAAACTCCTGTTTGTCATTGATGCTTTCGAGGAGCTGCGCGTGCCCTCAGGGGTGGAGGCGCTGGTGCACGACCTGTGTGTGGACTGGAAGACACAGAGGCCTGCGTCCACCCTCCTGGGGAGCTTACTGAAGAGAAAGCTCTTACCCACGGCCGCCCTACTGGTCACCACACGGCCCGAGGCCCTAAGGGAGCTGCGGCTCATGGTGGAGCAGCCACTCTTCGTGGAGATCGAGGGGCTCTCAGAGTGTGACAGGAAGGCGTATTTCCTGAGACACTTTGGAGAGGAGGCTCAGGCGCTGCGTGCTTTCCACCTGATGAAGAGCAATGCAACGCTGTTCCAAATGGGCGCGGCACCCGCTGTGTGCTGGATGGTGTGCACCTGCCTGAAGCTGCAGATGGACGAGGGTGAGGACCCTGGCCCCACCTGCCAGACCACCACATCGTTGTTGCTGCGTTTCCTCTGCAGCCAGTTTGCGCCCGCGCAGGGCAGCTGTCTGGGGCTGCACCTCAGGTCTACTCTGCACGCTCTGTGCCTGCTGGCCACTGAGGGCGTGTGGACACAGACCTCAGTGTTTGATGGACATGACCTGCTCAGGCTGGGTGTGCATGAGTCTGACCTGCACCCTTTCCTGAACAGGAATATCCTCCAGAAGAGCAGAGACTGTGAGGGCTGCTACTGCTTCCTCCACCTGAGTGTCCAGCAGTTCCTGGCCGCTGCCCTCTACATTCTGGGGAGCCAGGACCACCAAGACCTTCCAGCAGGAA--GCCCTAGCTGGGATGCTGGGAATGTGCAGAGGCTCCTCTCCAAGGAAGAAGGACTCAAGAACCCCTACCTAGCCCCCGTGGGGCACTTCCTATTTGGCCTCACCAATGAAAAGAGGGCCAGGGAGCTGGGGATGACTTTTGGCTGCCTGGTGTCCACCAAGGTCAAGCAGGAACTGCTGGAATGCAGGGTAGGGTCTCCTGAGAACA---GACCCTTCTCCTCGGTGACAGACACGAAGGAGACTTTGCACTGTCTCTATGAATCCCAGGAGGAGCAGCTTGTGAAGGAAGCCATGGTCCAGGTGACAGAAGTGTCCCTGGTTTTCAAAGATACCTCAGACATCATGCATGCATCCTTTTGCCTCAAGCATTGTGAAAGCTTGCAGAAAATGTGGCTGCAGATAGA---AAAGGGGATGTTTCTGGAGAATGATGCTGTGTCAGAATCAGAGGACCAGGCTGACCGGTAAGAATCCTCACTGTTCACTCTGTTAGCTTGCTTTTTC------- i canFam3.chr1 C 0 C 0 a score=5033.000000 s hg38.chr19_GL949753v2_alt 695926 2 + 796479 AG s panTro4.chr19 59897631 2 + 63644993 AG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826784 2 + 60714840 AG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60636765 2 + 64156825 AA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777791 2 + 59248254 AA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882185 2 + 51301725 AG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589418 2 + 50890351 AG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944045 2 + 49145316 AG i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046863 2 - 122678785 AG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103339605 819 - 106955855 I a score=141121.000000 s hg38.chr19_GL949753v2_alt 695928 49 + 796479 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT s panTro4.chr19 59897633 49 + 63644993 CCTCATCCCATGCCCCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826786 49 + 60714840 CCTCATCCCATGCACCCTTAGGAAGAGGCCAGAG---CCTCCTATGCACTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3651018 49 + 106955855 TCCCATTCCACGCTCCACTAGGAAGAGGCCAGCG---TCTCCTGTGCCCTGT i nomLeu3.chr10 I 1248 I 3527 s rheMac3.chr19 60636767 49 + 64156825 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777793 49 + 59248254 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882187 49 + 51301725 CCTCATCCCATGCGCCCTTAGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589420 49 + 50890351 CCTCATCCCATGCGCCCTTGGGAAGAGGCCAGAG---CCTCCTATGTGCTGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45944047 48 + 49145316 CCTCATCCCAGGGCCCCTTAGGAGGAGGCCAGAG---CTTCCTGGG-ACTGT i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046865 48 - 122678785 CCTCATCCCCTGCG---TTAGAAACAGGGCAGAGTGTCCCCCCGCTCCCTT- i canFam3.chr1 C 0 C 0 a score=117386.000000 s hg38.chr19_GL949753v2_alt 695977 54 + 796479 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---tctttgtttgttttt-------gttttga s panTro4.chr19 59897682 54 + 63644993 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC---TCtttgtttgttttt-------gttttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826835 62 + 60714840 GACTTAGGGTCAGGAATTCCCTCTTGTTGGAC--ttttttgtttgttttttgttttgtttttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340424 54 - 106955855 GGCTTAGGGTCAGGAATTCCCTCTTGTTGGAC--TCttttgtttgtttgt--------ttttgg i nomLeu3.chr10 I 819 C 0 s rheMac3.chr19 60636816 46 + 64156825 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---TCtttttttttta---------------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777842 52 + 59248254 GGCTTAGGCTCAGGAATTCCCTCTTTTTGGAC---tcttttttttttgtt-------tttt--a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882236 53 + 51301725 GGCTTAGGGTCAGGAATTCCCTCTttttggac---tcttttttttttttt-------tttt-ga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47589469 54 + 50890351 GGCTTAGGGTCAGGAATTCCCTCTTTTTGGAC---TCttttttttttttt-------tttttGA i chlSab2.chr6 C 0 I 1410 s calJac3.chr22 45944095 55 + 49145316 GGCTTAGAGTCGGAAATTCCCTCTTGCTGGGC--ttcctttcttgttgct-------gttttga i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046913 57 - 122678785 GGCATAGGATCAGAATTTTCTTCTTGCCAGAATTTCTTCTGCTAGCTTGC-------TCTTCAA i canFam3.chr1 C 0 C 0 a score=10075.000000 s hg38.chr19_GL949753v2_alt 696031 7 + 796479 gat-ggag s panTro4.chr19 59897736 7 + 63644993 gat-ggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826897 7 + 60714840 gat-ggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340478 8 - 106955855 gataggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636862 7 + 64156825 gac-ggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777894 7 + 59248254 gac-ggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882289 5 + 51301725 gac---ag i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944150 7 + 49145316 gat-ggat i calJac3.chr22 C 0 C 0 s canFam3.chr1 20046970 7 - 122678785 GGT-GGGG i canFam3.chr1 C 0 I 1762 e chlSab2.chr6 47589523 1410 + 50890351 I a score=190724.000000 s hg38.chr19_GL949753v2_alt 696038 83 + 796479 tcttgctctgtcgctcaggctggagc------gcagtggcgcgatcttggctccctgcaacctccgcctcccgggttcaagtgattctt s panTro4.chr19 59897743 83 + 63644993 tcttgctctgtcgcccaggctggagc------gcagtggcgcgatcttggctcactgcaacctctgcctcccgggttcaagtgattttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826904 83 + 60714840 tcttgctctatcgcccaacctggagc------gcagtggcgtgatcttggctcactgcaacctctgcctcctgggttcaagcgattctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340486 83 - 106955855 tcttgctctgtcacccaggctggagc------gcagtggcatgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636869 83 + 64156825 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777901 83 + 59248254 tcttgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacctctgcctcccgggttcaagcgattctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882294 83 + 51301725 tctcgctctgtcacccaggctggagc------gcagtggcacgatcttggctcactgcaacttctgcctcccaggttcaagcgattctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45944157 89 + 49145316 tcttgctctgttgcccatgctggagctggagtgcagtggtgggatctcagctcactgcaacctccacctcccaagttcaagcaattctc i calJac3.chr22 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e chlSab2.chr6 47589523 1410 + 50890351 I a score=838699.000000 s hg38.chr19_GL949753v2_alt 696121 336 + 796479 ctgcctcagcctcctgagtagctgggactacaggcgcctgccaccttgcccggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactccgcctgacctcaggtgatccacctgcctcagcc-tccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-ttttttaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcatcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacaggtattaagtgtgcaccatcatg s panTro4.chr19 59897826 337 + 63644993 ctacctcagcctcctgagtagctgggactacaggcgcctgccaccttgcctggctaatttttatattttcattagagacgggatctcagcatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagccttccaaag---tgggattacaggcatgattcaccatgcccggccCAAATATAt-tttttgaagacagggtcttgctgtgttgctcaggctgga--------gtacagtggtgaaatc--agctcactgcagcctcaaacttctgggttcaagtgat-------------gttcctgagtacctgggatgacagttattaaatgtgtaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56826987 339 + 60714840 ctgcctcagccttctgagtagctgggactacaggcgcccaccaccttgcttggctaatttttatattttcagtagagatgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcccggccCAAATAttt-ttttttaagacagggtcttgctctgttgctcaggctgga--------gtacagtggcgcaatcatagctcactgcagcctcaaacttctgggttcaagtgtt-------------gttcctgagtacctgggatgacaggtattaggtgtgcaccatcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340569 347 - 106955855 ctgcctcagcctcctgagtagctgggactacaggcacccgctgtcttgcctggctaatttttatattttcagtagagacgggatctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggattacaggcatgattcaccatgcctggccCAAATATAt-ttttttaagacagggtcttgctctgttgctcaggctggagtacagtggtacagtggtgcaatcatagctcactgcagcctcaaacttcggggttcaagtgaa-------------gttcctgagtacctgggatgacaggtattaggtgtgaaccatcatg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60636952 331 + 64156825 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgcgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgggtacctaggatgacaagtattaggtgtgcaccatcgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55777984 331 + 59248254 ctgcctcagcctcctgagtagctggg---------acctgtcaccatgcccggctagtttttgtatttttagtagagacagagtctcaccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctcttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgaa-------------gctcctgagtgcctaggatgacaagtattaggtgtgcaccatcgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882377 340 + 51301725 ctgcctcagcctcctgagtagctgggactacaggtacctgtcaccatgcccggctagattttgtatttttagtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctacctcagcctcccaaag---tgggaatacaggcatgattcaccgtgcccagcccaaatatctattttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattAGGTGTGCACCATCGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47590933 340 + 50890351 ctgcctcagcctcctgagtcactgggactataggtacctgtcaccatgcccggctagtttttgtatttttggtagagacagagtctcgccatgttggccagtctggtcttgaactcctcctgacctcaggtgatccacctgcctcagcctcccagag---tgggaatacaggcatgattcaccgtgcccggccCAAATATCTAttttttaaggcagggtcttgctctgttgctcaggctgga--------gtacaatggtgcaatcatagctgactgcagcttcaaacttctgggctcaagtgat-------------gctcctgagtacctgggatgacaggtattaggtgtgcaccatcgtg i chlSab2.chr6 I 1410 C 0 s calJac3.chr22 45944246 299 + 49145316 ctacctcagcctcctgagtagctagaattgcaggcatgcaccaccatgcctggctaatttttgtatttctagaagagatggggtctcaccatgttgcccaagcccctctcgaactctg---gacctcaaataatccacctgctttggcctctcaaagtgctgtgactatagatccaagccatcactcccggcc----TTTTT-TTTTTT---------TTTTTTTAAGTTG--AAGGCTGGA---------------------------------------cttaaactcttgggctcaagcaatccttctgccttaggctccaaagtagctgggacta-------gaggtgtgcactgccatg i calJac3.chr22 C 0 I 892 e canFam3.chr1 20046977 1762 - 122678785 I a score=122096.000000 s hg38.chr19_GL949753v2_alt 696457 91 + 796479 tccagctaacttaagtgggggtttttttttgtgtttttttttttttttttttttttggaaagacaaaatctcactatgttgtccaggctgg s panTro4.chr19 59898163 74 + 63644993 cccagctaacttaagtggggg-----------------ttttttttgcttttttttggaaagacaaaatctcactatgttgtccaggctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827326 82 + 60714840 cccag------taagtggg---ttttttgtttttttgtgtttttttttttttttttggaaagacagaatctcactatgttgcccaggctgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340916 78 - 106955855 cccagctaacttacgtggg---tttttt----------ttttttttttttttttccggaaagacagaatctcactatgttgcccaggctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637283 61 + 64156825 ctcagctaacttaagtga--------------------ctttttttttt--------gaaag--agaatctcactatgttgcccaggctgg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778315 67 + 59248254 ctcagctaacttaagtga--------------------ctttttttttt--tttttggaaag--agaatctcactatgttgcccaggctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882717 69 + 51301725 CTCAGCTAActtaagtga--------------------ctttttttttttttttttttaaag--agaatctcactatgttgcccaggctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591273 63 + 50890351 ctcagctaacttaagtga--------------------ctttttttttt------tttaaag--agaatctcaccatgttgcccaggctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945437 63 + 49145316 cccagcctttttt-------------------------tttttttttttttttttttgagac--agagtcttgctctgttg-ccaggctgg i calJac3.chr22 I 892 I 80 e canFam3.chr1 20046977 1762 - 122678785 I a score=23278.000000 s hg38.chr19_GL949753v2_alt 696548 18 + 796479 tcttgaactcccaaagca s panTro4.chr19 59898237 18 + 63644993 tcttgaactcccaaagca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827408 18 + 60714840 tcttgaactcccaaagca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103340994 18 - 106955855 tcttgaaatcccaaagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637344 7 + 64156825 tcttga-----------a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778382 7 + 59248254 tcttga-----------a i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882786 18 + 51301725 tcttgaactctcaaagca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591336 18 + 50890351 tcttgaactcTCAAAGCA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20046977 1762 - 122678785 I e calJac3.chr22 45945500 80 + 49145316 I a score=985349.000000 s hg38.chr19_GL949753v2_alt 696566 409 + 796479 ctgagattacaggcatgagttaccacacgccctgcctgaatatttcttattgatatgtatagatatgtatatTCCCAAtc-------------tttttttttttttttgagacggagtttcactctttttcccaggtcggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattataggcgtgagtcaccgtgcccggtcTATATTCTCTATCTTTTATCAATGATGTGCTT s panTro4.chr19 59898255 422 + 63644993 ctgagattacaggcatgagttaccacacgccctgccTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacggagtttcactctttttcccaggttggagtgaagtggcttgatctcggctcactgcaacctctgccccaccaggttcaatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcccgacctcaggtgatccacctgcctcagcctctcaaagtgctaggattataggcgtgagtcaccgtgcccagtcTATATTCTCTATCTTTTATCAATGATGTGCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827426 399 + 60714840 ctgggattacaggcatgagctaccacacgccctgccTGAATATTTCTTACTGGTATGTATAGATATGTATATTCCCAA---------------tttttttttttttttgagacggagtttcactctttttctcaggttggagtgaagtggctcgatctcagctcactgcaacctccgccccaccaggttccatgattctcctgcctcagcctcatgagtagctgggattacagccacccacgaccatgcccagctaatttttgtacttttagtagagatggggtttcaccatgttggccaggcagatctcaaactcctgacctgaggtgatccacctgcctcagcctcacaaagtgctaggattataggcgtgagccaccgtgcccagtcT--------TCTCTTTTATCAATGATGTGCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341012 422 - 106955855 ctgggattacaggcatgagctaccacacACCCTGCCTGAATATTTCTTATTGATATGTATAGATATGTATATTCCCAATCttttttttttttttttttttttttttttgagacagcgtttcactctttttcccaggttggagtgaagtggctcgatctcggctcactgcaacctccgccccaccaggttcaatgattctcctgtctcagcctcataagtagctgggattacagccacccatgaccatgcccagctaatttttgtacttttagtagagacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatccacccgcctcagcctcacaaagtgctaggattacaggtgtgagccaccgtgcccggtcTGTATTCTCTATCTTTTATCAATGATGTGCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637351 389 + 64156825 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA---------------------------tttttttttttttttttttggtgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcattgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcagtaggattagaggcatgagccaccgtacccggccTGTAT------TCTTTTATCAGTGATGTGCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778389 404 + 59248254 ctGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTTTTATTGACATGTATA----------TTCACGAtt--tttttttttttttttttttttttttGGTgacagcgtttcactcttttgcccaggttggagtgaagtggcccaatctcagctcactgcaacctccaccccaccaggttcactgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccggctaatttttgtacttttagtagagacaaggtttcaccatgttggccaggctggtttcgaactcctgacctcaggtgatcccaccgcctcagccttacaaagcactaggattacaggcatgagccaccgtgcccggccTGTAT------TCTTTTATCAATGATGTGCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47882804 397 + 51301725 ctgggatcacagacatgaggtACCATACACCCtgcctaaatattttttattgacatGTATA----------TTCacgat---------tttttgttgttgttgttgttgagacaacgtttcactcttttgcccaggttggagtgaagtggctcgatctcagctcactgcaacctccaccccaccaggttcaatgattctcctgcctcagcctcacgagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagcagagacaaggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatcccaccacctcagcctcacaaagcactaggattacaggcatgagccaccgtgcccggcctgtat------tcTTTTATCAATGTTGTGCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591354 391 + 50890351 CTGGGATCACAGACATGAGGTACCATACACCCTGCCTAAATATTTCTTATTGACATGTATA----------GTCACAGT---------Ctttttcttttttttt----gagacagcgtttcactc--ttgcccaggttggagtgaagtggctcgatctcagctcactacaacctccaccccaccaggttcaatgattctcctgcctcagcctcacaagtagctgggattacctccacccacaaccacgcccagctaatttttgtacttttagtagagacaaggtttcaccgtgctggccaggctggtctcgaactcctgacctcaggcgatcccgccgcctcagcctcacaaagcactaggattacaggcgtgagccaccgtgcctggccTGTGT------TCTTTTATCAATGATGTGCGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945580 315 + 49145316 ctgggactacaggcgcacgccaccaa-------gcccagcTAAT--------------------------------------------ttttttttctttttctttttgagacagagtttcacttttttgcctaggttggagtgaaatggcacaatctcagctcactgca--------------------------------------------------------attgcaggcacccgccaccatgcccagctaattttcatatttttagtagagactgggttttgccatgttggtcaggctggtctccaactcttgacctcaggtgatttacctgcctcagcctcccaaagcgctaggattacaggtgtgagccaccatgcccACACTGTATTCCCAATCTTTTATCTATGATATGTTT i calJac3.chr22 I 80 C 0 e canFam3.chr1 20046977 1762 - 122678785 I a score=156376.000000 s hg38.chr19_GL949753v2_alt 696975 53 + 796479 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG s panTro4.chr19 59898677 53 + 63644993 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAATAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827825 53 + 60714840 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTCTAAGAAGAACAGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341434 53 - 106955855 AGCATTTTAACTTATTTTTACCCTCTACTGGA-TTTTTGTGTAAGAAGAATAGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637740 50 + 64156825 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778793 50 + 59248254 AGCATTTTAACTTATTTTTACCCTCTGTTGGA-TTTTTGTGT---AAGAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883201 51 + 51301725 agcattttaacttatttttaccCTCTGTTGGATTTTTTGTGT---AAGAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591745 50 + 50890351 AGCATTTTAACTCATTTTTAGACTCTGTGGGA-TTTTTTTGT---AAGAATAGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45945895 53 + 49145316 AGCATTTTAACTTATTTTTACCCTCTATTGGA-TTTTTGTGTAAGAAGTATAAG i calJac3.chr22 C 0 I 481 s canFam3.chr1 20048739 53 - 122678785 agaaTTTTGGCTTATTCTGACCCTCTGTAAGA-TTCTTGTGCAAGAAATTTGAG i canFam3.chr1 I 1762 C 0 a score=1268441.000000 s hg38.chr19_GL949753v2_alt 697028 397 + 796479 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTG----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAA-CCC--TTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAGGATCTGATGGGTCTAGCAATCAATGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTCAAATCCTTAGGGTATGAAAAT s panTro4.chr19 59898730 398 + 63644993 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGCTAATAAGTGATTACATGGTCCAGCTTTCAATTA----------TACTCATTTGTCAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGGTGTAACCCC--CTTCTTCTCTTCCCTATAGATCCCAGGATGATCAGCACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGATCAAATAAAGATCTGATGGGTTTAGCAATCAACGATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTAAAATCCTTAGGGTGTGAAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56827878 395 + 60714840 TTCTTTGTCCTGTGATGCTTTTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGTTTTCAATTA----------TACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCGTGATGGACATACA----------------------TTTGGTGTAACCCG--CTTCTTCTCTTCCCTGTAGATCCCAGGATGATCAGCACGTGCTTCCTTTCTGGATGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGCAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAAGGAATAGCCTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCGTGAACTGAAATCCTTAGGGTGTGAAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341487 392 - 106955855 TTCTTTCTCCTGTGATGCTTCTTGGGTGTTGAGTTGTCTGATGGTGGTGC---TAAATGATTAAATGGTCCAGCTTTCAGTTA----------TACTTATTTGTTAGGGGTATATGCACAGAGAAACCCTAAATACTTCAGCCGTGATGGACACACA----------------------TTTGATGTAACCCC-----CTTCTCTTCCCTGTAGATCCCAGGATGATGAGCACGTGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTTATGGGTCTAACAATCAATAATAGCTTTCTCAGTGCCTCCCTAGTAAGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAATTAAAATCCTTAGGGTGTGAAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60637790 401 + 64156825 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTATAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55778843 401 + 59248254 TTCTTTCTTCTGTGATGCTTCTTGGCTGTTGAGTTGTCTGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGACCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAATAGCTTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGACTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883252 401 + 51301725 TTCTTTCTTCTGTGATGCTTCTTGGGTGTTGAGTTGTCCGATGGTGGTGC---CAAAAGATTAAATGGTCCAGCTTTCAGTTACACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCcatgatgaacctaca-----------------------ttgatgTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGATCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGAgtctagaaatcaataatagctTTCTGAGTGCCTCCCTAGTAAAGATCCTGTGTGAACAGATAGCCTCTGACAACTGTCATCTCCAGAGAGTGGTGTAAGTAGACACTAATTCATGAACTAAAATCCTAAGGGTGTGAAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47591795 401 + 50890351 TTCGTTCTTCTGTGATGCTGCTTAGGTGTTGAGTTGTGTGATGGTAGTGC---CAAATGATTAAATGGTCCAGCTTTCAGTTATACTTATTTCTACTTATTTGTTAGGGGTATATGCCCAGAGAAACCCTAAATACTTCAGCCATGATGAACCTACA-----------------------TTGATGTAACCCC-----TTTCTCTTCCCTGTAGATCCCAGGATGACCAGGACATGCTTCCTTTCTGGACGGACCTTTGTTCCATATTTGGCTCAAATAAGGATCTGATGGGTCTAGAAATCAATAACAGCTTTCTGAGTGCCTCCCTAGTGAGGATCCTGTGTGAACAGATAGCCTCTGACAGTTGTCATCTCCAGAGAGTGGTGTAAGCAGACACTAATTCATGAACTAAAATCCTAAGGCTGTGAAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45946429 395 + 49145316 TTCTTTCTCCTGTGATGTGTCTTGGGCATTGAGTTGTCTGACAGTGGTGA---TAAATGATTAAATGGTCCAGCTTTCAATTC----------TACTTGTGTATTAGGGGTGTGTGCCCAGAGAAGCCCTAAACACTTTGGCCATGACGGATGCACG----------------------TTTGATGTGACCCC--CTTCTTCCTTTCCCTGCAGATCCCAGGATGATCAACACCTGCTTCCTTTCTGGACGGATCTTTGTTCCGTATTTGGCTCAAACAAGGATCTAATCACTCTAGAAATCAATAATAGCTTTCTTAGTGCCTCACTGTTACGGATCCTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGTAAGTAGAAACTAATTCATGAACTAAAATCCTTAGGATGTGAAAGt i calJac3.chr22 I 481 I 305 s canFam3.chr1 20048792 415 - 122678785 --TTTTTTCCAGTGACATGTCTTAGGTGATGAATTGTCTGATAGTGACAC---TAAGTCATTAAATCATCTGACTTTTAGAGT------------TCTATTTACTAGGAGTGTGTGCCCAGAGCAACCCTAAATATCTTCATGATGTTGGACAAATGTTATATTTTCTCTCCAGCAATCTTTGGTAAATTCCTTCCTTTGCCTTTTCCCAACAGGTCCCAGAATGATCAACACGTGCTTCCTTTCTGGATAGACTTCTGTTCCATGTTTGACTCAAATAAAAACCTGATATTTCTAGACATCAGTCAGAGCTTCCTTAGTGCCTCATCTGTGAGAATTCTCTGTGAAAAAATAACCTCTGCTACCCATAATCTTCAGAAAGTGGTGTAAGTAGAAGCTAACCCCTGGATGAAAACCCCTAGGGCATAACCAA i canFam3.chr1 C 0 C 0 a score=-899.000000 s hg38.chr19_GL949753v2_alt 697425 2 + 796479 GG---- s panTro4.chr19 59899128 2 + 63644993 GG---- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828273 2 + 60714840 GT---- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341879 2 - 106955855 GT---- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638191 2 + 64156825 GT---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779244 2 + 59248254 GT---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883653 2 + 51301725 GT---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592196 2 + 50890351 GT---- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20049207 6 - 122678785 GCTCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22 45946824 305 + 49145316 I a score=121335.000000 s hg38.chr19_GL949753v2_alt 697427 37 + 796479 TACAATGTTAA-----------CATCGGAGCAATATTCAGATTCCTGT s panTro4.chr19 59899130 37 + 63644993 TACAATGTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828275 37 + 60714840 TACAATTTTAA-----------CGCTGTAACAATATTCAGATTCCTGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341881 37 - 106955855 TACAATTTTAA-----------CATTGGAGCAATATTCAGATTCCTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638193 37 + 64156825 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55779246 37 + 59248254 TACAATTTTAA-----------TATTGGAACAATATTTAAATTCCTGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47883655 37 + 51301725 TACAATTTTAA-----------TATTGGAACAATATTCAAATTCCTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592198 37 + 50890351 TACAATTTTAA-----------TATTGGAACAGTATTCAAATTCCTGT i chlSab2.chr6 C 0 I 314 s calJac3.chr22 45947129 37 + 49145316 TACATTTTTAA-----------TATTGGAGCAATATTCAAATTCCTGT i calJac3.chr22 I 305 C 0 s canFam3.chr1 20049213 48 - 122678785 TACATTTTTAAGGCTCCATTTTTATTGGAGCAATATTTGAATTCCTTT i canFam3.chr1 C 0 C 0 a score=1808.000000 s hg38.chr19_GL949753v2_alt 697464 2 + 796479 AC s panTro4.chr19 59899167 2 + 63644993 AC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828312 2 + 60714840 CC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341918 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779283 1 + 59248254 -C i macFas5.chr19 C 0 I 303 s papAnu2.chr19 47883692 1 + 51301725 -C i papAnu2.chr19 C 0 I 352 s calJac3.chr22 45947166 2 + 49145316 CC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049261 2 - 122678785 TC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47592235 314 + 50890351 I e rheMac3.chr19 60638230 304 + 64156825 I a score=247639.000000 s hg38.chr19_GL949753v2_alt 697466 87 + 796479 TAGACTC---TTAAGTGCTCGAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGATAATCGTATAAAGTAATTT----------------CT s panTro4.chr19 59899169 87 + 63644993 TAGACTC---TTAAGTGCTCAAGACACAGGGAATTGAGAGAGTCCTGT---CCTTAAATTTATTTTGTGGGGTAATCGTATAAAGTAATTT----------------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828314 103 + 60714840 TAGACTC---TTAGGTGCTCAAGACACAGGGAATTGAGAGAGTCTTGT---CCTTAAATTTGTCTTGTGGGATAATCGTATAAAGTAATTTAGTAATTTAGAAATTACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103341920 87 - 106955855 TAGACTT---TTAAGTGCTCAAGACACAGGGAATTGAGGGAGTCCTGT---CCTTAAATGTGTCTTGTGGGATAATCATATAAAGTAATTT----------------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638534 85 + 64156825 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55779587 85 + 59248254 TAGACTC---TTAAGTGCTGAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------TT i macFas5.chr19 I 303 C 0 s papAnu2.chr19 47884045 85 + 51301725 taGACTC---TTAAGTGCTCAAGACACAGAGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCGTGGGATAATCGTAGAAAGTAATTT----------------tt i papAnu2.chr19 I 352 C 0 s chlSab2.chr6 47592549 85 + 50890351 TAGACTC---TTAAGTACTCAAGACACAGGGAATTGA--GAGTCCTGT---CCTTAAATTTGTCTCATGGGATAATCGTATAAAGTAATTT----------------TT i chlSab2.chr6 I 314 C 0 s calJac3.chr22 45947168 88 + 49145316 TAGACTC----TAAGTGCTCAAGACACGAGGAATTGAGAGAGTCCTACCAGCCTTAAATTTGTCTTGTGGGATAATCATATAAAGTAACTT-----------------T i calJac3.chr22 C 0 C 0 s canFam3.chr1 20049263 86 - 122678785 CAGAATCCAACTGGGCATTCAAGACATAAGAAGTTGAGATGGTCCATA---CCATACATTTGTCTACTG----AAGCATATGAAGTAATTT----------------TT i canFam3.chr1 C 0 I 1652 a score=556.000000 s hg38.chr19_GL949753v2_alt 697553 2 + 796479 A-------------G s panTro4.chr19 59899256 2 + 63644993 A-------------G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828417 15 + 60714840 AAATTACTTTATACG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342007 2 - 106955855 A-------------G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638619 2 + 64156825 A-------------G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779672 2 + 59248254 A-------------G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884130 2 + 51301725 a-------------g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592634 2 + 50890351 A-------------G i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947256 2 + 49145316 A-------------G i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=230973.000000 s hg38.chr19_GL949753v2_alt 697555 106 + 796479 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacgtgacaa s panTro4.chr19 59899258 106 + 63644993 Gggctgggcatggtggttcacacttgtaattccaacacttcgggaggccgaggcagacagatctcttgaggtcaggagttcgagaccagcctggccaacatgacaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828432 106 + 60714840 Aggcagggcatggtggttcacacctgtaattccaacacttcgggaggccgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacattacaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342009 106 - 106955855 Gggctgggcatagtggttcacacctgtaattccaacacttcgggaggctgaggcagacagatcacttgaggtcaggagttcgagaccagcctggccaacatgacaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638621 106 + 64156825 Gggtcgggcacagtggctcacacctgtaattccaacacttcgggaggccgaggcagatagatcacttgaggtcaggagtttgagaccagcctggccaacatgacaa i rheMac3.chr19 C 0 I 46 s macFas5.chr19 55779674 106 + 59248254 Gggtcgggcacagtggctcacacctgtaattccaacattttgggaggccgaggcagacagatcacttgaggtcaggagttccagaccagcctagccaagatggcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884132 105 + 51301725 gggccgggcatggtggctcacacctgtaattccaacactttgggaggccgaggcagacagatcacttg-ggtcaggagttccagaccagcctagccaagatggcaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947258 106 + 49145316 Tggcagggcacagtggctcacaccagtaatctcagcactttgggaggctgaggcgtatggataacttgacataaggggttcaagaccagcctggccaacatggtga i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C a score=130769.000000 s hg38.chr19_GL949753v2_alt 697661 82 + 796479 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- s panTro4.chr19 59899364 82 + 63644993 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgggaggctgagg------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828538 82 + 60714840 aaccctgcctctactaaaaata----caaaaattatccaggcgtggtggcaggcacctgtaatatcagctacttgagaggctgagg------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342115 82 - 106955855 aactctgcctctactaaaaata----caaaaattatccaggcatggtgacaggcacctgtaatctcagctacttaggaggctgagg------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779780 82 + 59248254 aaccccgcctctactaaaaata----caaaaattatccgggcgtggtggcgggcgcctgtaataccagctacttcggaggctgagg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884237 82 + 51301725 aaccccgcctctactaaaaata----caaatattatccgggcgtggtggcgggcgcctgtaatagcagctacttcggaggctgagg------- i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947364 93 + 49145316 aaccccatctctactaaaaatatttttaaaaattagccagctctggtggcaggtgcctgtaatcccagctacttgggatgttgagggttgagg i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e rheMac3.chr19 60638727 46 + 64156825 I a score=105742.000000 s hg38.chr19_GL949753v2_alt 697743 130 + 796479 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccaagatcctgccactggactccagtctgagtgacagagcgagactgcgtctcaaaaaaaaaaaaaaa----aaaaaagaaaaagaaaaaaa s panTro4.chr19 59899446 123 + 63644993 caggagaattacttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagtctgagtgacagagcgagactcggtctcaaaaaaaaaaaaaaa-----------aaagagaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828620 117 + 60714840 caggagaattgcttgaacccaggaggcggaggt----tgcagtgaaccaagatcttgccactagactccagtctgagtgacagagcgagactctgtctcaaaaaaaaaaaaaaa-----------------gaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342197 112 - 106955855 cgggagaattccttgaacccaggaggcggaggt----tgcagtgaaccgagatcctgccactggactccagcctgagtgacagagcgagactctgtctccaaaaaaaaaaGGCG----------------------GG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47884319 136 + 51301725 --taagagtcgcttgagtccgggaggtggagtttgcatgcagtgagctgagatcgcgccgctgtgctccagcctgcgcgacagagtgagactccatctcaaaaaaaaaaacaatctataaagatttaaaataaaaaaa i papAnu2.chr19 C 0 C 0 s calJac3.chr22 45947457 112 + 49145316 caggagaattgcttgaacccaggaggcagaggt----tgcagtgagctgagatcatgccactgcactgcagcctgagcaaac-----agactccatctcaaaaaaaaaaaaaaG-----------------TTAAAAG i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592636 0 + 50890351 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=166047.000000 s hg38.chr19_GL949753v2_alt 697873 149 + 796479 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-tggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacgaaaaatacaaaaatttgccaggtgtc s panTro4.chr19 59899569 149 + 63644993 Gggccgggcacaatggctcacgcctgtagtcccagcactttgggggcccaagg-cggggggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaagaccctgtctctacaaaaaatacaaaaatttgccaggtgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828737 149 + 60714840 Gggccgggcacaatggctcacgcctgtagtcccagcacttcgggggcccaagg-cggagggatcacttgaggtcaggagttcaagaccagcctggccaagatggtgcaaaaccctgtctctactaaaaatacaaaaatttgctaggtgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342309 147 - 106955855 Gggccgggcacagtggctcacgcctgtaatcccagcactttgggggcccgagg-cggggggatcacctgaggtcaggagttcgagaccagcctggccaagatg--gcaaaaccctgtctctactaaaaatacaaaaatttgccaggcgtg i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47592636 146 + 50890351 Gggccgggcacggtggctcacacctgtaattccagcactttgggaggccaagg-cagacagatcacttgaagtcaggagttccagaccagcctagccaagatg--gcaaaaccccgcctctactaaaaatac-aaaattatccgggcgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947569 148 + 49145316 Gggctgggggcggtggctcacgcctggaatcccagcactttgggaagtcaaggccaggggaatcacttgaggtcaggagttcaagactaacctggccaagatg--gcaaaaccctatctctactaaaaatataaaaattagctgggcgag i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C e rheMac3.chr19 60638727 46 + 64156825 I a score=57877.000000 s hg38.chr19_GL949753v2_alt 698022 42 + 796479 gtggcaggtgcctataatcccagctactccggatgctgaggg s panTro4.chr19 59899718 42 + 63644993 gtggcaggtgcctataatcccagctactccggatgctgaggg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828886 42 + 60714840 gtggcaggtgcctataatcccagctattccagatgctgaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342456 42 - 106955855 gtggcaggtgcctataatcccagctactccggatgctgaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638773 41 + 64156825 gtggcgggcgcctgtaataccagctacttcggaggccgagg- i rheMac3.chr19 I 46 C 0 s chlSab2.chr6 47592782 41 + 50890351 gtggcgggcgcctgtaataccagctactctggaggctgagg- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947717 41 + 49145316 gtggcaggcacctgtaactccaggaactcttgaggctgggg- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e macFas5.chr19 55779862 0 + 59248254 C a score=207987.000000 s hg38.chr19_GL949753v2_alt 698064 101 + 796479 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactc---cagcctgggcaacagagtgagactccatctcaaa s panTro4.chr19 59899760 104 + 63644993 --taggagtcgcttgaatccgggaggcagagtttgctttgcagtgagccgagatcgcgccactgcactccagcagcctgggcaacagagtgagactccatctcaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56828928 101 + 60714840 --taggagtcacttgagtccgggaggcagagtttgctttgcagtgagccgagatcacgccactgcactc---cagcctgggcgacagagtgagactccatctcaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342498 101 - 106955855 --taggagttgcttgaatccaggaggcagagtttgctttgcagtgagcgaagatcgtgccactgcattc---cagcctgggcgacagagtgagactccatctcaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638814 100 + 64156825 --taagagtcacttgagtccgggaggtggagttcgc-atgcagtgagccgagatcgtgccactgcgctc---cagcctgtgcaacagagtgagactccatctcaaa i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55779862 100 + 59248254 --taagagtcacttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgtgccactgcgctc---cagcctgtgcgacagagtgagactccatctcaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47592823 100 + 50890351 --taagagtcgcttgagtccgggaggtggagtttgc-atgcagtgagctgagatcgcgccactgcactc---cagcctgggcgacacagtgagactccatctcaaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947758 96 + 49145316 caggagaatcacttgaatcagggagatgaaggttgc-----agtgagccgagatcatgccactgcactc---cagcctgggtgac--ggtgagactctatctcaaa i calJac3.chr22 C 0 I 3 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=8350.000000 s hg38.chr19_GL949753v2_alt 698165 11 + 796479 ga---aaaaaaaaa s panTro4.chr19 59899864 11 + 63644993 ga---aaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829029 12 + 60714840 ga--gaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342599 14 - 106955855 gaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779962 7 + 59248254 -------aaaaaaa i macFas5.chr19 C 0 I 2 s chlSab2.chr6 47592923 11 + 50890351 ---aaaaaaaaaaa i chlSab2.chr6 C 0 I 25 s calJac3.chr22 45947857 11 + 49145316 ---gaaaaagaaaa i calJac3.chr22 I 3 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=17182.000000 s hg38.chr19_GL949753v2_alt 698176 16 + 796479 TCTGTAAAGATGGACA s panTro4.chr19 59899875 16 + 63644993 TCTGTAAAGATGGACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829041 16 + 60714840 TTTGTAAAGATGGACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342613 16 - 106955855 TCTGTAAAGATGGACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779971 16 + 59248254 tatataaagatttaaa i macFas5.chr19 I 2 I 4 s calJac3.chr22 45947868 16 + 49145316 TCTGTAAAGATGGACA i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e chlSab2.chr6 47592934 25 + 50890351 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=1911.000000 s hg38.chr19_GL949753v2_alt 698192 1 + 796479 A s panTro4.chr19 59899891 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829057 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342629 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55779991 1 + 59248254 a i macFas5.chr19 I 4 I 1 s chlSab2.chr6 47592959 1 + 50890351 A i chlSab2.chr6 I 25 I 1 s calJac3.chr22 45947884 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C e rheMac3.chr19 60638914 31 + 64156825 I a score=2104.000000 s hg38.chr19_GL949753v2_alt 698193 4 + 796479 AAAT s panTro4.chr19 59899892 4 + 63644993 AAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829058 4 + 60714840 AAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342630 4 - 106955855 AAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638945 3 + 64156825 aaa- i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55779993 3 + 59248254 aaa- i macFas5.chr19 I 1 C 0 s chlSab2.chr6 47592961 3 + 50890351 AAA- i chlSab2.chr6 I 1 C 0 s calJac3.chr22 45947885 4 + 49145316 AAAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I e papAnu2.chr19 47884455 0 + 51301725 C a score=5576.000000 s hg38.chr19_GL949753v2_alt 698197 2 + 796479 TT s panTro4.chr19 59899896 2 + 63644993 TT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829062 2 + 60714840 TT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342634 2 - 106955855 TT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638948 2 + 64156825 tt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55779996 2 + 59248254 TT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884455 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592964 2 + 50890351 TT i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947889 2 + 49145316 CT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20049349 1652 - 122678785 I a score=147935.000000 s hg38.chr19_GL949753v2_alt 698199 63 + 796479 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC s panTro4.chr19 59899898 63 + 63644993 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATCG-----AGCCCCTGGTTTCCATTTAAGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829064 63 + 60714840 AAACATGGAAAAAATAGTTCCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCCATTTAAGTAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342636 63 - 106955855 AAACATGGAAAAAATAGTTGCTAAAGTTTAAATATATTG-----AGCCCCTGGTTTCTATTGAAGTAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60638950 54 + 64156825 aaaCATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i rheMac3.chr19 C 0 I 911 s macFas5.chr19 55779998 54 + 59248254 AAACATGGAAAAAAT---------AGCCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47884457 54 + 51301725 aaacatggaaaaaat---------agtctaaataTATTG-----AGCCCCTAGTTTCTATTTAAGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47592966 54 + 50890351 AAGCATGGAAAAAAT---------AGTCTAAATATATTG-----AGCCCCTAGTTTCTATTTAAGTAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947891 67 + 49145316 AAACATGGAGAAAAA-GTTTCTGAAGTTTAAATACATTGTTTTTAAACTTGTATTTCTGTTTAAGTGC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051001 56 - 122678785 aaaTATGAACAAAGT---TTCCAGTGTTTAAACCTGTTG----CAGCCCTTTGTTCTCATGTA----- i canFam3.chr1 I 1652 C 0 a score=3848.000000 s hg38.chr19_GL949753v2_alt 698262 3 + 796479 GAT s panTro4.chr19 59899961 3 + 63644993 GAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829127 3 + 60714840 GAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342699 3 - 106955855 GAC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55780052 3 + 59248254 AAC i macFas5.chr19 C 0 I 1009 s papAnu2.chr19 47884511 3 + 51301725 AAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593020 3 + 50890351 AAC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947958 3 + 49145316 AAT i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C e rheMac3.chr19 60639004 911 + 64156825 I a score=3276.000000 s hg38.chr19_GL949753v2_alt 698265 1 + 796479 A s panTro4.chr19 59899964 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829130 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342702 1 - 106955855 A i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639915 1 + 64156825 a i rheMac3.chr19 I 911 C 0 s macFas5.chr19 55781064 1 + 59248254 a i macFas5.chr19 I 1009 C 0 s papAnu2.chr19 47884514 1 + 51301725 A i papAnu2.chr19 C 0 I 707 s chlSab2.chr6 47593023 1 + 50890351 A i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947961 1 + 49145316 A i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051057 0 - 122678785 C a score=263710.000000 s hg38.chr19_GL949753v2_alt 698266 95 + 796479 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC s panTro4.chr19 59899965 95 + 63644993 CAGGTGTACACACTAAAGATTTCAC-TTTCGTTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829131 107 + 60714840 CAGGTGTACACACTAAAGATTTAACTTTTCGTTCTCTATGCGTCTTTTCCCTAGGTTCAAAAACATTTTCCCCAGCTGTATTTAATCGTCTAACCTCTGCCTAGCTC i ponAbe2.chr19 C 0 I 457 s nomLeu3.chr10 103342703 95 - 106955855 CAGATGTGTACACTCAAGATTTCAC-TTTCATTC--------TCTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCTTCG--GAACCTCTGCCTAGCTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60639916 90 + 64156825 caGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATCG--GAACCTCTGCCTAGCTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781065 90 + 59248254 caGGTATAGACAGTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTTCCCAGCTGATGCTTATTG--GAACCTCTGCCTAGCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885222 90 + 51301725 cAGGTATAGACACTCAagatttcac-ttt-------------tgttttcccTAGGTTCAAAAACG-TTTTCCCAGCTGATGCTCATCG--GAACCTCTGCCTAGCTC i papAnu2.chr19 I 707 C 0 s chlSab2.chr6 47593024 90 + 50890351 TAGGTATAGACACTCAAGATTTCAC-TTT-------------TGTTTTCCCTAGGTTCAAAAACA-TTTCCCCAGCTGATGCTCCTCG--GAACCTCTGCCTAGCTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45947962 93 + 49145316 GAGATACAGACACTCAACATTTCAC-TTTGGT----------GCTTTTTTCTAGGATCAAAAACA-TCTCCCCAGCTGATGCGTATCG--GAATCTCTGCCTAGCTC i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051057 91 - 122678785 ----TATATAAATGCAAGATTTCAC-CTTTCTTA--------TCCTTTCCCTAGCCTCAAAAATA-TTTTCCCAGCAGACGCTTATAG--AAACTTCTGCATTGCTT i canFam3.chr1 C 0 C 0 a score=143331.000000 s hg38.chr19_GL949753v2_alt 698361 42 + 796479 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA s panTro4.chr19 59900060 42 + 63644993 TTCGAGGTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829695 41 + 60714840 TTCGAGGTCACAAGACTGTAACGTATCTGA-CCTTCAAGGCA i ponAbe2.chr19 I 457 C 0 s nomLeu3.chr10 103342798 42 - 106955855 TTCGAGCTCACAAGACTGTAACGTATCTGACCCTTCAAGGCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640006 42 + 64156825 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781155 42 + 59248254 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTTCAAGGCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885312 42 + 51301725 TTCGAGGTCACAAGACTGTAACGCATCTGACCCTGCAAGGCA i papAnu2.chr19 C 0 M 50 s chlSab2.chr6 47593114 42 + 50890351 TTCGAGGTCACAAGACTGTAACACATCTGACCCTTCAAGGCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948055 42 + 49145316 TTCAAGGTCAAAAGACTGTAACATATCTAAGACTTCGAGGCA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051148 42 - 122678785 TTGGTGGTCATGAGACTCTCACGCATCTGACTCTCCAAGGAA i canFam3.chr1 C 0 C 0 a score=109291.000000 s hg38.chr19_GL949753v2_alt 698403 42 + 796479 ATGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA s panTro4.chr19 59900102 42 + 63644993 ACGACCAGGATGA-TATGTTTCCC-GCATTGTGTGAGGTCTTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829736 44 + 60714840 ATGACCAGAATGATTATGCTTCCCGGCATTGTGTGAGGTCTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342840 42 - 106955855 ATGACCAGAATGA-TATGCTTCCC-ACATTGTGTGAGGTCTTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640048 42 + 64156825 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781197 42 + 59248254 CTGACCAGAAGGA-TATGCTTCCT-GCATTGTGTGAGGTCTTGA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47593156 42 + 50890351 CTGACCAGAAGGA-TATGCTTCCC-GCATTGTGTGAAGTCTTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948097 42 + 49145316 GTGCCCAGAACGA-TACGCTTCCT-GCACTGTGTGAGGTCCTGA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051190 42 - 122678785 ATGACCAGAATGA-TATGCTTCCC-ATTTTGTGTGAAATCTTGA i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47885354 50 + 51301725 M a score=795717.000000 s hg38.chr19_GL949753v2_alt 698445 252 + 796479 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAGCTACCACAAGCTTATGTGGCAATTTTGTGTAAATAAGAA--------AAAGTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCAGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGCCTTGAACAGTAAACACCCTGGACAACCATACGTGAGGACCCT------GAATCCAAAGAAA s panTro4.chr19 59900144 252 + 63644993 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTAATCATTAAAATCCTTCATCATACAAACATAAgctaccacaagcttatgtggcaattttgtgtaaataagaa--------aaagttcgttattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgagtttctacttgccttgaacagtaaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56829780 253 + 60714840 GACATCCAGAAATGTAACCTTGCGATATCTCGGGTATATCTCTTTAATCATTAAAATGCTTCATCATACAAAC--Aggccaccacaagcttatatggcaattttgtgtaaataagaa--------aaagTTCGTTATTCTGACTAGAAACAGTA---CTAAGGGCAGATGACCCGGGATGCAGCATGGGCTGAACTTGAGTTTCTACTTGccttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAATCCAAAGAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103342882 249 - 106955855 GACATCCAG-AATGTAACC-TGCGATATCTCGGGTATATGTC-TTAATCATTAAAATCCTTCATCATACAAAC---AGCTACCACAAGCTTATATGGCAATTTTGTATAAACaagaa--------aaagttcattattctgactagaaacagta---ctaagggcagatgacccaggatgcagcatgggctgaacttgggtttctacttgccttgagcagtaaacaacctggacaaccatatatgaggaccct------gAATCCAAAGAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640090 249 + 64156825 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCCTACGAAC---AGCTACCACAAGCTTTTGTGGCAATTTTGTGTAAATGAGAA--------AAAGTTTGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTTGAGTTTCTACCTGccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781239 249 + 59248254 GACACCCAG-AATGTAACC-TGCGATATCTCGGGTATATCTC-TTCATCGTTAAAATCCTTCGTCATACGAAC---Agctaccacaagcttatgtggcaattttgtgtaaatgagaa--------aaagtttgttattctgactagaaacagta---ctaaaggcagatgacccaggagacagcatgggctgaacttgagtttctacctgccttgagcagtaaacaacctggacaaccatacgtgaggaccct------gAATCTGAGGAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885406 254 + 51301725 GACACCCAG-AATGTAACC-TGCGATATTTCGGGTATATCTC-TTCATCGTCAAAATCCTTCGCCATACAAAC---AGCCGCCACAAGCTCATGTGGCAATTTTGTGTGAATG-GGA--------AAAGTCCGTTATTCTGACTAGAAACAGTA---CTAAAGGCAGATGACCCAGGAGACAGCATGGGCTGAACTCGAGTTTCTACTTGCCTTGAGCAGTAAACAACCTGGACAACCATACGTGAGGACCCTGAATCCGAATCCGAGGAAA i papAnu2.chr19 M 50 C 0 s chlSab2.chr6 47593198 249 + 50890351 GACACCCAG-AATGTAACC-TGCGATATCTTGGGTATATCTC-TTCATCATTAAAATCCTTCGTCATACAAAC---Agctaccacaagcttctgtggcaattttgtgtaaatgaaaa--------aaagttcgttattctgactagaaacagta---ctaaaggcagatgatccaggagacagcatgggctgaacttgagtttctacttgccttgagcagtaaataacctgggcaaccatacatgaggaccct------gAATCCGAGGAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948139 245 + 49145316 GGCACCCAA-AATGTAACC-TGCAGTATCTCGGGTACACCTC-TTCGTCATGAAAACCCTTCCTCATACCAGC---Agctaccac-agcttatacggcaattttgtgtcaattagga--------aaagttggtga--ctgactagaaacagta---ttaagggcagatgtcccaggatacagcatgggttgaacttgagtttccacttg-cttgagcagtgaacaacctggacaaccatacgtgaggaccct------gAGTCCAGAGAAA i calJac3.chr22 C 0 C 0 s canFam3.chr1 20051232 262 - 122678785 GACACCCAA-AATGTAATC-TGCAATACCTCAGGTATATCTC-ACCATCACTGAAAACTTCCAGCATGTGAAC-AGAGTTCCTACAAGCCTATATAGCAATTTTGAATAAAGTAGGAGGGGTGGGGAAATCCCTTATTCTGATTAGAAACTGTACTCCTCCAGGCACATGCCACAGAACAGAAAATGGGCTAGACTTTAGTTTCCCCTTGTACTGATCATTGAGCAACCTGGGCAACCATCCACAACAGGCCT------GAGTCCAAAAAAA i canFam3.chr1 C 0 I 20 a score=762651.000000 s hg38.chr19_GL949753v2_alt 698697 323 + 796479 CTCCCAGAATC---TTTATC---------ATCttttttttttttttt-------------atgaagtcttgctctgttgcccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccacgcccggctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgccctcctc-aggctcccaaagtgctgggattataggcatgagccaccatgcccagccAGAGTCCTTATG s panTro4.chr19 59900396 327 + 63644993 CTCCCAGAATC--ttttatc---------atcttttttttttttttttt----------aatggagtcttgctctgttgaccaggccaaagtgcaatggcacgatcttggctcactgcaacctctgtctcctgggttcaagtaattctgctgcctcagcctcccaagttgctgggattacaggcacccgccaccatgcccagctaatttttgtgcattt-------------agtggagctggtttcgccaca-ttgccaggctgg-------------------------------tctcgaactcatgacctcaggtgacctgcccccctc-aggctcccaaagtgctgggattataggcgtgagccaccatgcccagccAGAGTCCTTATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830033 333 + 60714840 CTCCCAGAATC---tttatc---------ttcctttttttttttttttt----ccttcagatggagtcttgctctgttgcccaagccgaagtgcagtggcacgatcttggctcactgcaacatctgcctcccaggttcaagtaattctgctgcctcagcctcccaagtagctgggattacaggcacccgccaccatacctggctaatttttgcgctttt-------------agtagagatggtttcgccaca-ttgccaggctgg-------------------------------tcttgaactcatgacctcagatgacctgccccccccgaggctcccaaagtgctgggattatagacgtgagccaccatgcccagccAGAGTCCTTATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343131 337 - 106955855 CTCCCAGAATC---TTTATC---------ttctttttttttttttttttttttccttcagatggagtcttggtctgttgcccaggccgaagtgcaatggcacgatcttggctcactgcagcctctgcctcccgggttcaagtaattctgctgcctcagcctcccaagtagctgggatcacaggcacccgccaccacacctggctaatttttgtgctttt-------------agtagagatggttttgccacg-ttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccccctgaggctcccaaagcactgggattataagtgtgagccactatgcccagccAGAGTCCTTATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60640339 317 + 64156825 TTCCCAGAATC---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaactaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCGTATG i rheMac3.chr19 C 0 I 7 s macFas5.chr19 55781488 317 + 59248254 TTCCCAGAAtc---tttatc---------------tttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtacgatggcacaatcttgactcactgcaacctctgcccctcgagttcaagtaatt---ctgcctcagcctcgcaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgttttggcacatttgccaggctgg-------------------------------tcttgaactcatgacctcaggtgacctgccccctctcaggctcccaaagtgctgggattataggcgtgagccactgtgcccagccAGAATCCTTATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885660 319 + 51301725 TTCCCAgagtc---tttatc------------ttttttttttttttttt---------agatgaagtcttgccctgttgcccaggccgaagtACGATGGCACAATctttactcactgcaacctctgcccctcgggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagactgtttCGGCACATttgccaggctgg-------------------------------tattgaactcatgacctcaggtga-ctgccccctctcaggctcccaaagtgctggcattataggcgtgagccaccgtgcccagccagaatccttatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593447 331 + 50890351 TTCCCAGAATC---TTTTGCtttttttttttttttttttttttttttgt---------agatgaagtcttgccctgttgcccaggccaaagtgcaatggcatgatcttgactcactgcaacctctgcctccagggttcaagtaatt---ctgcctcagcctcccaagtagctgggattacaggcac---ccaccacgcccggctaacttctgtgctttt-------------agtagagact-tgtcggcacatttgccaggctgg-------------------------------tattgaactcatgacctcaggtgacctgccccctctcagcctcccaaagtgctgggattataggtgtgagccaccgtgcccagccAGAATCCTTATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948384 354 + 49145316 CTCCCAGAATCATCTTTACC---------tttttttttttttttttttt-----tttgagatgga----------gttgtccaggctggaatgcagtggcatgatctcagctcactgaaacctctgcctcccatgttcaagcaattctcctgcctcagcctcccaagtagctgagattacaggtgcctgccaaaacacccagctaacttttgtgcttttttttttcttttgaggcggag----tcttgctctg-tcaccaggctggaatgtggtagtgcaatcttggctcaccgcaacctctgcctcctgggttcaagtga-ttctcctgtctcagccttctgagtagctgggactgcagatatgaaccaacatgcccagctaa---------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=-2283.000000 s hg38.chr19_GL949753v2_alt 699020 31 + 796479 TTTTGGTTTTGGTTTTGGttttttctttt------tc s panTro4.chr19 59900723 29 + 63644993 TTTTGGTTTTGGttttttctttttctttt-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830366 23 + 60714840 TTTTGGttttggt------tttttctttc-------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343468 37 - 106955855 TTTTGGTTCTGGTTTTTTCTTTTCCTTTTtttttttt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55781805 8 + 59248254 -------------TTCCCttt---------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885979 16 + 51301725 -------------ttcccttttttttttt-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593778 24 + 50890351 -------------TTCCCTttttttttttgttttttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948738 5 + 49145316 -------------------ttttt------------- i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e rheMac3.chr19 60640656 7 + 64156825 I a score=88794.000000 s hg38.chr19_GL949753v2_alt 699051 33 + 796479 ttttttctttttgagatggagtctcgctctgtc s panTro4.chr19 59900752 33 + 63644993 ttctttttttttgagatggagtctcgctctgtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830389 33 + 60714840 ttttttttttttgagatggagtctcgctctgtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103343505 33 - 106955855 ttttttttttttgaaatggagtctcactctgtc i nomLeu3.chr10 C 0 M 613 s rheMac3.chr19 60640663 33 + 64156825 ttttttttttttgagatggagtcttgctctgtc i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55781813 33 + 59248254 ttttctttttttgagatggagtcttgctctgtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47885995 33 + 51301725 ttttttttttttgagatggagtcttgctctgtc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593802 33 + 50890351 tgttttttttttgagatggagtcttgctctgtc i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948743 33 + 49145316 gtatttttagtagagatggagtttcaccatgtt i calJac3.chr22 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I a score=408333.000000 s hg38.chr19_GL949753v2_alt 699084 221 + 796479 acccaggctggagtgcgttggtatgatctcaggtcactgcagcctccacctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatctacccccc-cacccccacc s panTro4.chr19 59900785 221 + 63644993 accaaggctggggtgcaatggtatgatctcaggtcactgcagcctccacctcccaggttgaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcataccaccacacctggttaa-tttttgtattattagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacccgcc-cacccccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830422 216 + 60714840 acccaggctggagtgcaatggtataatctgagctcactgcagcctccacctaccaggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aggtgcacaccaccacacctggttaa-tttttgtattcttagtagagatggagttttaccacattggccaggctggtctcgaactcatgacctcaggtgatccacc--cc-caccccc--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640696 211 + 64156825 tcccaggctggagtgcaatggcatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcatcagcctcctgagtagctgggagtac--aagcacgcgccaccatacctggttga-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55781846 211 + 59248254 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgcattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886028 211 + 51301725 tcccaggctggagtgcaatggtatgatctcagctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctggttaa-tttttgtattcttagtagaaatagggttttatcacattggccaagctggtctcgaactcatgaccccaggtgatccatcctcc----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47593835 211 + 50890351 tcccaggctggagtgcaatggtatgatctccgctcattgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac--aagcacgcgccaccatacctagttaa-tttttgtattcttagtagaaatggggttttatcacattggccaggctggtctcgaactcatgacctcaggtgatccatcctcc----------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22 45948776 193 + 49145316 ggccaggctg-------------------------------atctcgaactcctgacctccaatgacccacccaccttggccttcaaaat-gctgggattaccaaagtgtgagccactgcgcctggctgattttttgtatttttagtagagacagggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatctgctcacctcagccttacc i calJac3.chr22 C 0 N 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=92288.000000 s hg38.chr19_GL949753v2_alt 699305 61 + 796479 ccaccccgccgtcggcctcccaaagtgaggcatgagccaccgtgcccagccCAGAATCTTT s panTro4.chr19 59901006 61 + 63644993 ctaccccgccgtcggcctcccaaagtgaggcgtgagccaccgtgcccagccCAGAATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830638 50 + 60714840 -----------ccggcctcccaaagtggggtgtgagccaccgtgcccagccCAGAATCTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640907 50 + 64156825 -----------tcggcctcccaaactggggcgtgagccaccgtgcccagccCAGAATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782057 50 + 59248254 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccagccCAGAATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886239 50 + 51301725 -----------tcggcctcccaaagtggggcgtgagccactgtgcccggcccagaatcTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594046 50 + 50890351 -----------tcggcctcccaaagtggggcgtgagccaccgtgcccggccCAGAATCTTT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051494 20 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=472308.000000 s hg38.chr19_GL949753v2_alt 699366 242 + 796479 ATCTTCTATCAGAGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCA-GTGGCTGCCCAGGCGATGAGAACCTACATGCATCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG s panTro4.chr19 59901067 240 + 63644993 ATCTTCTCTCAGAGATCATTCACTCATGGTTCATGCTT---CTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCTACATGCGTCATGGGGTTCCATGAAGCCTCACTTGGCCACACTGGTGTAGTAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830688 235 + 60714840 ATCTTCTATC--AGATCATTCACTCATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGAACCCTTCAGGAACATCAAGTTGCCCCTTTTCTGTTAGTCCTCTA--TTGAGAGCTCTCCCCTTGGGAAGCTGTCCACGTGGCTGCCCAGGTGATGAGAACCATCATGCA----AGGAGTTCATGAAGCCTCACTTGGCCACATTGGTGTAGTAGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60640957 241 + 64156825 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCT-CTTTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTCCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCGTCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782107 242 + 59248254 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTGCTGTATGATGATTCAGAATACCAGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCGTGGAGCCTCACTTGGCCACACTGGCATAGTAGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886289 242 + 51301725 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCAGCTATTG--------ACTTTTTTCAAGCAAGATCCCTTCAGGAACATCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGATGGGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594096 241 + 50890351 AGCTTCTGTCAGAGATCATTCAC-CATGGTTCATGCTTCTCCTGTATGATGATTCAGAATACCGGCTATTG--------ACATTTTTCAAGCAAGATCCCTTCAGGAACAGCGAGTTGCCCCTTTTCTGTTAGTCCTCTGGTTTGAGAGCTCTCCCCTTGGGAAGCTCTCCACGTGGCTGCCCAGGTGAT-GGAACCATCATGTGTCATGGGGTTCCATGGAGCCTCACTTGGCCACACTGGCATAGTAGG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20051514 246 - 122678785 ATCCTCTATCAGAGAGAATTGGTTTATGGTT--TGTTTCTCCTGTC--ATGATTCAGAATACCAGATTCTGTCCAGTATCCTCTGTCCAGGCAAAGATACTTTGGGAGCAACAGATTTTCCTTCTCTTGGTAGTCCTCTGGGTTGAAAGATCTCCCCTTGGGATATTCTCCACATGATAGCTCTGGTGAGTATTGTCATTACTCATCATGGGGTTCCATTGATCCTCGCTTGACCACATTTG-ATAATAGG i canFam3.chr1 I 20 I 2524 e nomLeu3.chr10 103343538 613 - 106955855 M a score=83448.000000 s hg38.chr19_GL949753v2_alt 699608 53 + 796479 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg s panTro4.chr19 59901307 53 + 63644993 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacgcctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830923 52 + 60714840 TGGTCATTGGCCTCAAATTATTGCCCTGggccaggcgcagtggctcacg-ctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641198 51 + 64156825 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i rheMac3.chr19 C 0 I 347 s macFas5.chr19 55782349 51 + 59248254 TGGTCACTGGCCTC--ATTGTTCCCCTGggccaggcacagtaggtcacgtctg i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47886531 53 + 51301725 TGGTCACTGGCCTCAAATTGTTCCCCTGGGCCAAACACAGTAGGTCACgcctg i papAnu2.chr19 C 0 I 16 s chlSab2.chr6 47594337 53 + 50890351 TGGTCACTGGCCTCAAATTGTTCCCCTGggccaggcacagtaggtcacgcctg i chlSab2.chr6 C 0 I 16 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=462741.000000 s hg38.chr19_GL949753v2_alt 699661 383 + 796479 ggaggccgaggtgggtggatcacttgaggtcaggagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgttggcgcacgcctgtagtcccagctactcaggaggctgaggcaggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctc-----------aaaaaaaaaaaaaaaaaTCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccacgtctactaaaaa s panTro4.chr19 59901360 386 + 63644993 ggaggccgaggtgggtggatcacttgacgtcacgagttcaagaccggcctggtcaacatggtgaaactctgtctctactaataatacaaaaa-----ttagctgggcatgtttgcgcacacctgtagtcccagctactcaggaggctgaggcgggagcatcatttgaacctgagaggcggaggttgcagtgagctgagatcacaccaccgcactccagtctgggcaacagtgtgagactgtctcaa--------aaaaaaaaaaaaaaaaaaaCTTggctgggtgcggtagctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac--aaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56830975 398 + 60714840 ggaggccgaggcgggtggatcacttgaggtcaggagttcaagaccagcctggtcaacatagtgaaaccccgtctctactaataatacaaaaattagcttagctgggcatgttggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcatttgaacctgagaggcggaggttgccgtgagctgagatcacaccaccgcactccagcctgggcaacagtgtgagactgtctcaaaaataaataaataaataaataaaGAGTCTTggccgggtgcggtggctcatgcctgt-atcccagcactttgggaggccaaggtgggtggatcac--gaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatgtctactaaaaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55782416 386 + 59248254 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcgaggcgtgttggcacacgcctgtggtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcgcaccactgcactccagcctggtcaacagtgcgagactatctca---------aaaaaaaaaaaaaaaaaaTCTTgaccgggtgcggtggctcatgcctgtaatgacagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47886600 383 + 51301725 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccagcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttactcaggaggcggaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc------------aaaaaacaaaaaaaaatcttggccgggtgcggtggctcatgcctataatcccagcacttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccggtctggccaacatggtgaaaccccatctctactaaaaa i papAnu2.chr19 I 16 C 0 s chlSab2.chr6 47594406 385 + 50890351 ggaggctgaggc-agtgaatcacttgaagtcaggagttagaaaccatcctggttaacatggtgaaaccccgtctctactaataatacaaaaa-----ttagcggggcgtgttggcacacgcctgtagtcccagttattcaggaggcagaggcaggagaatcatttaaacctgagaggcggaggttgcagtgagctgagatcacaccactgcactccagcctggtcaacagtgcgagactatctc----------aaaaaaaaaaaaaaaaaaTCTTggccgggtgcggtggctcatgcctataatcccagcatttcaggaggccaaggtgggtggatcacttgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccatctctactaaaaa i chlSab2.chr6 I 16 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M e rheMac3.chr19 60641249 347 + 64156825 I a score=266322.000000 s hg38.chr19_GL949753v2_alt 700044 152 + 796479 tacaaaaacattagctgggcatggtggcgcgtgcctgtaatcccagctactcatggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacgccattgcactccagcctgggcaacagagcaaaac s panTro4.chr19 59901746 152 + 63644993 tagaaaaacattagccgggcatggtggcgcgtgcctgtaatcccagctactcgtggaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcacaccattgcactccagcctgggcaccagagcaaaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831373 149 + 60714840 tacaaaaaaattagccgggcatggtggcgcgtgcctgtaatcccagctactt---gaggctgatgcaagagaattgcttgaacctaggaggcagaggtagcagtgagccaagatcatgccattgcactccagcctgggcaacagagcaaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60641596 152 + 64156825 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i rheMac3.chr19 I 347 C 0 s macFas5.chr19 55782802 152 + 59248254 tacaaaaatattagccgggcatggtggcaggcgcctgtaatcccagctactcgtgggggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtaagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47886983 149 + 51301725 tacaaaaatattagccgggcatggtggcaggcacctgtaatcccagctactc---ggggctgaggctggagaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594791 152 + 50890351 tacaaaaatattagctgggcatggtggcgggtgcctgtaatcctagctactcgtgggggttgaggcaggagaattgcttgaacccaggaggcagaggttggagtgagccaagatcacgccattgtactccagcctgggcaacagagcaaaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103343538 613 - 106955855 M a score=856502.000000 s hg38.chr19_GL949753v2_alt 700196 403 + 796479 tccatctcgaggacag-aaaaaaaaTTGATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTT------AGTTGAATAGGATGCTGTACATCTTACAGGTATTGGAAGGTTG-AATGAAA------CCAAGCCCATGCATTCAATAGTGGCTGCTATCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAtttcttt-ctttttttctcaagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccaagtagctgggattacaggca s panTro4.chr19 59901898 406 + 63644993 tccatctcgaggacag-aaaaaaaaTTTATTGCTCTGGCTCTACTGAT-ACAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTGGAAGGCTG-AATGAAA------CCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCGTTGCAATTACCCTCTTTTCTT-TTTGCCTGAGGATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTAACTAAtttcttt-ctttttttctcgagatatagtcttgctctgtctcctaggctggagtgcagtgccacaatcttggttcactgcaacctctgcctcccgggttcaagtgattcttctccgtcaacctcccgagtagccgggattacaggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56831522 407 + 60714840 tccatctcgaggacag-aaaaaaaaTTTATTGTTCTGGCTCTACTGAT-GAAATCTTAGGCTGCTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATTTGAAGGTTG-AATGAAACCAAATCCAAGCACATGCATTCAATAGTGGCTGCTGTCATTACTAACCATTGC-ATTACCCTCTTTTCTTGTTTACATGAGAATAATGGAATGCAGGGTGAGGGGGAATATTGGGTGAATTAAAGATTTGGGTCACTAAttt------tttttttctcgagatatagtcttgctctgtctaccaggctggagtgcagtgccacagtcttggttcactgcaacctctgcctcctgggttcaagtgattcttctccgtcaacctctcgagtagctgggattacaggcA i ponAbe2.chr19 C 0 M 186 s nomLeu3.chr10 103344151 408 - 106955855 TCCATCTTGAGGACAGAAAAAAAAATTTATTGCTCTGGCTATACTGAT-ACAATCTTAGGCTGTTTAATGGGATCTTC---TCAGTTGAATAGGATGCTGTACATCTCACAGGTATT-GAAGGTTG-AATGAAACCAAATCCAAGCACAGGTATTCAATAGTGGCTACTGTCATTACTAACCATTACAATTACCCTCTTTTCTTTTTTACATGAGAATAATGGGATGCAGGGTGAGGGGGAATATTGGGTGAATTGAAGATTTGGGTCACTAAtttcttt-cttttttcctcgagatatagtcttgctctgtctcccaggc-----tgcagtgccacaatcttggttcactgcaacctctgcctcctgggttcaagtgattcttctgcgtcagcctcccaagtagctgggattacaggca i nomLeu3.chr10 M 613 C 0 s rheMac3.chr19 60641748 408 + 64156825 tccatctcaagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTAt---ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55782954 407 + 59248254 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACGTCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTGTTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAATTAAAGATGTGGGTCACTAATCTA----ttttttttctcgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887132 411 + 51301725 tccatctccagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAATGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCATGTATTCAATAGTGGCTGCTGTCGTCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGATGGGGAACATCGAGTAAATTAAAGATGTGGGTCactaatctatttcttttttttctggag--gtagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcagcctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtaactgggattacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47594943 409 + 50890351 tccatctcgagggtaa-aaaaa------aTTGCTCTGGCTCTACTGATAACGATCCTAGGCTGCTTAATGGGATCTTCTTGTCAGTTGAGTGGGATACTGTACATCTCACAGGTATTTGAAGGTTGAAATGAAACCAGATCCAAGCCCACGTATTCAATAGTGGCTGCCGTCATCACTAACCACTACAATTACCCTCTTTTCTTTGTTACATGAGAATAATGGGGTACAGGGTGAGGGGGAACATCGAGTAAattacagatgtgcgtcactaatctatc--tcttttttcttgag--atagtcttgctctgtctcccaggctggagtgcagtgccacaatcttggttcactgcaacctcggcctcccaggttcaagtgattctcctgcctcaacttcctgagtagctgggattacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I a score=597560.000000 s hg38.chr19_GL949753v2_alt 700599 360 + 796479 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgttccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca s panTro4.chr19 59902304 360 + 63644993 cccacctgtatttttgtatttctagtattttgtatttctagtagagacagggttacaccatgctggtggccagggtggtctcaaactcctgacctcgggcaatccaccacacccagctaa-tttttggtatatttagtagagccggggtt--tcaccgtgttggctgggctggtctcgaactcctgacctcaagtga--CATCCATCTTCCAAAATgctgggattacagccatgtgccaccacgcccagctaattcttgtatttttaggagaaatggggtttcatcatgttgtcccggctggtcttaaactcctggcctcatgatccacctgccttggcctgccaaagtcctgggattacaggca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344559 362 - 106955855 cccggctgtattcttgtatttctaatattttgtatttctagtagagacagggttacaccatgctggtggccaaggtggtctcaaactcctgacctcaggcaatccaccacacccagctaa-tttttggtatatttagtacagccggggttaacaaacatgttggccaggctggtctcgaactcctgacctcaagtga--cacccatctTCCAAAATgctgggattacagccatgtgccaccatgcccagctaattcttgtatttttaggagaaacagggtttcatcatgttgtcctggctggtcttaaattcttggcctcatgatccacctgccttggcctgccaaagtgctcggattacaggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642156 346 + 64156825 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-aatcccccacgcccagctaatttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggattacaggcA i rheMac3.chr19 C 0 M 331 s macFas5.chr19 55783361 346 + 59248254 cccagctgtat----------------ttttgtatttctagtagagacagggttacgccatgctggtggccagggtggtctcaaactcctgacctcggg-AATCCCCCACGCCCAGCTAAtttttttatgtctttagtagagatggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccatctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctgcctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887543 345 + 51301725 cccagctgtat----------------ttttatatttctagtatagacagggttacaccatgctagtggccagggtagtctcaaactcttgaccttggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtagtTTTAGGAGaaacgggatttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595352 345 + 50890351 cccagctgtat----------------ttttgtatttttagtagagacagggttacaccatgctggtggccagggtagtctcaaactcctgacctcggg-aatcccccacgcccagctaa-ttttttatgtctttagtagagacggggtt--tcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacctgccttccaaaatgctgggattacagccacgtgccaccctgcccagctaattcttgtatttttaggagaaacggggtttcatcatgttgtcctggctggtcttaaactcctcgcctcatgatctacctgccttggcctgccaaagtactgggatcacaggca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=15048.000000 s hg38.chr19_GL949753v2_alt 700959 12 + 796479 tgagccactgtg s panTro4.chr19 59902664 12 + 63644993 tgagccactgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344921 12 - 106955855 tgagccactgtg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55783707 12 + 59248254 tgagccaccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887888 12 + 51301725 tgagccaccatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47595697 12 + 50890351 tgagccaccatg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e rheMac3.chr19 60642502 331 + 64156825 M a score=533922.000000 s hg38.chr19_GL949753v2_alt 700971 363 + 796479 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGGGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtactttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgagacggagtcttgctctgtcgcccaggctagagtgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcgccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg s panTro4.chr19 59902676 363 + 63644993 cccagccACTCATTTCTTATGAATTTATTCTAACACATTTTCCGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGggctgggta--------tggtggctcctgcctgtaatcccagtgctttgggaggcctaggctggtgtatcgcttgaagtcaggagttt---tttgttttgaaacggagtcttgctctgtcgcccaggctagactgcagtgg------------------------------agtgatctcggcttactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcctgagtagctgggactacaggcacgtgtcaccacgcccatctaa----------cttttgtatgtttagtagagccggggtttcaccatgttggccaggatgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103344933 370 - 106955855 cctagccACTCATTTCTTATGAATGTATTCTAACACATTTTCTGGATGAA--CAGAGCACCTTGAAACATAGGTTAGTGGGCTGGGCACTGTGGGTTAgtggctcatgcctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagttt---tttgtattgagacagagtcttgctctgttgcccaggctagagtgcagtgg------------------------------agtgatctcggctcattgtaacctctgcctcctgggttccagtgattctcttgcctcagcctcccgagtagctgggactacaggcacgtgtcgccacgcccagctaa----------ttttggaatg-ttaataaaaatgggggttctccctggttgtcagactgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60642833 345 + 64156825 CCCAGCCACTCATTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-----------------------------tcccaggttcaagca---attctgccttagcctcctgagtagttgggactacaggtgcgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i rheMac3.chr19 M 331 C 0 s macFas5.chr19 55783719 343 + 59248254 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACGTAGGTTAGTGgactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacacccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47887900 374 + 51301725 cccagccactcaTTTCTTACGAATTTATTCTAACACATTTTCCGGATGAACGCAGAACACCTTGAAACGTAGGTTAGtggactgggca--------tggtgcctcatacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgcgccaccacgcccagctaatttcttttcttttctttttttttttttgagacggagtctcgctctgtcgcccaggctgg i papAnu2.chr19 C 0 I 563 s chlSab2.chr6 47595709 343 + 50890351 cccagccACTCATTTCTTACGAATTTATTCTAACACATTTTCCAGATGAACACAGAGCACCTTGAAACATAGGTTAGTGgactgggca--------tggtgcctcctacctgtaatcccagtactttgggaggcctaggctggtgtatcacttgaagtcaggagtttttgtttgttttgagatggagtcttgctctgtcgcccaggctggagtgcagtgg------------------------------agtgatcttggctcactgcaacctccacctcctgggttcaatt----ctcttgcctcagcctcctgagtagctgggactacaggcatgtgccaccacgcccagctaa----------ttttcgtatgtttagtagagctggggtt--------------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M a score=22839.000000 s hg38.chr19_GL949753v2_alt 701334 18 + 796479 tctcaaactcctgacctc s panTro4.chr19 59903039 18 + 63644993 tctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103345303 18 - 106955855 tcccaaactcccaacctc i nomLeu3.chr10 C 0 M 3096 s rheMac3.chr19 60643178 18 + 64156825 tctcgaactcctgacctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784062 18 + 59248254 tctcgaactcctgacctc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596052 18 + 50890351 tctcgaactcctgacctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e papAnu2.chr19 47888274 563 + 51301725 I a score=54710.000000 s hg38.chr19_GL949753v2_alt 701352 64 + 796479 ctgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA s panTro4.chr19 59903057 64 + 63644993 ccgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccattgccccggccA i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643196 64 + 64156825 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784080 64 + 59248254 gtgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596070 64 + 50890351 atgatctgcccgcctcggcctcccaaagtgttgggattacaggtgtgcgccattgccctggccA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e ponAbe2.chr19 56831929 186 + 60714840 M e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=284334.000000 s hg38.chr19_GL949753v2_alt 701416 234 + 796479 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcgggagaatctcttgaatctgggaggcagaggttgctgtgagctgagatcgcgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaCCAAACAA s panTro4.chr19 59903121 234 + 63644993 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatacaaaaattagccaggcaagatggcatttgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaatccaggaggcagaggttgctgtgagctgagatcacgccactacactccagccagggcgacagagcataaataactccctttcaaaaaaCCAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832115 234 + 60714840 aagttaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaaatagaaaaattagctaggcaagatggcattcgcctgtaatcccagccactcaggaggctgaggcgggagaatctcttgaatccaggaggcagaggttgctgcgagctgagatcgcgccactacactccagccagagtgacacagcataaataactccctttcaaaaaaccaaacaa i ponAbe2.chr19 M 186 C 0 s rheMac3.chr19 60643260 229 + 64156825 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagagggcacgcgtctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcagaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784144 229 + 59248254 aagttaggagtttgagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaaattagccaggcaagatggcacgcatctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596134 229 + 50890351 aagttaggagtttaagaccaggctggccaacatggtgaaaacccgtctctact-aaaaatacaaaacttagccaggcaagatggcacgcgcctgtaatcccagctactcgggaggctgagacaggagaattgcttgaatccaggaggcggaggttgctgtgagctgagattatgccactacactccagcctgggtgacacagc----ataattccctttcaaaaaaccaaacaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20051760 2524 - 122678785 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=202859.000000 s hg38.chr19_GL949753v2_alt 701650 150 + 796479 TGAAACATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccactggtct---gaccaccctttgacaactgctgctccagataattcaagtcggggtataac s panTro4.chr19 59903355 150 + 63644993 TGAAACATAGGTTAGCGGAGTCTGCATCCAACATTAGAGTCAGATTGACTAAG--Ttctgtatttccagctgattcctgggcgatgttggtgccgctggtct---gaccaccctttgacaactgctgTTCCAGATAATTCAAGTCGGGGTATAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56832349 148 + 60714840 tgaaaCA-----TAGCGGACTCTGCATCCAACATTAGAGTAAGATTGACTAAG--TTCTTTatttccagctgattcctgggcgatgttgatgccgctggtctggggaccaccctttgacaactactgCTCCAGATAATTCAAGTCGGGGTATAAC i ponAbe2.chr19 C 0 I 557 s rheMac3.chr19 60643489 155 + 64156825 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAATTCGGGGTGTAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784373 155 + 59248254 tgaaacataggttagtggactctgcatccaacatttgagtcaggttgactgaggctcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCAGATAATTCAAGTCGGGGTGTAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596363 155 + 50890351 tgaaaCATAGGTTAGTGGACTCTGCATCCAACATTTGAGTCAGGTTGActgaggttcatgtatttccagctgattcctggacaatgctgatgccactggtctggggaccatcctttgacaatcactgCTCCGGATAATTCAAGTCGGGGTGCAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054284 138 - 122678785 TAAAACAGAAATCAGTGgattctgcatctggagttt------------ctgaggatt-tgtgtttctaactgcttgccagatgatgctgatgcagctggtccagggatcacactttg----ccactgCTCTATGTAATTTATTCTAGGACATGAC i canFam3.chr1 I 2524 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=49156.000000 s hg38.chr19_GL949753v2_alt 701800 56 + 796479 acaac------cagtgagatgtaaacc-aaagacgattccacg-gttagattctcaagaatgaC s panTro4.chr19 59903505 56 + 63644993 ACAAC------CAGTGAGATGTAAACC-AAAGACGATTCCGCG-GTTAGATTCTCAAGAATGAC i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60643644 56 + 64156825 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-ATTAGATTCTCAAGAATAAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784528 56 + 59248254 ATAAC------CAGTGAGATATAAATC-AAAGATGATTCCGTG-GTTAGATTCTCAAGAATAAC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596518 56 + 50890351 ATAAC------CAGTGAGCTATAAATC-AAAGATCATTCCGTG-GTTAGATTCTCAAGAATAAC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054422 64 - 122678785 ATAATGTGGTAAAATGAGGGGTAAACCTGGAGACTGTATCAAGCGTTTGGTTATCAAGAATGAT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56832497 557 + 60714840 I e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=8313.000000 s hg38.chr19_GL949753v2_alt 701856 7 + 796479 TTGTTCT s panTro4.chr19 59903561 7 + 63644993 TTGTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833054 7 + 60714840 TTGTTCT i ponAbe2.chr19 I 557 C 0 s rheMac3.chr19 60643700 7 + 64156825 GTATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784584 7 + 59248254 GTATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47596574 7 + 50890351 GTATTCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054486 7 - 122678785 GTGTTCT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M e papAnu2.chr19 47888274 563 + 51301725 I a score=211631.000000 s hg38.chr19_GL949753v2_alt 701863 162 + 796479 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactctgggaggccgaggtgggcagatcacctgagattgggagtttgagaccagcctgaccaacatggagaga--cccccacctctactgaaaatacaaaattagctgggcatgttggtgcatggtgcatg s panTro4.chr19 59903568 157 + 63644993 ---------gccgggcgcggtggctca-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagagacccccccacctctactgaaaatacaaaattagctgggcatg-----gc--ggtgcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833061 154 + 60714840 ---------gccgggcgcagtggctcg-cgcctgtcatcccagcactttgggaggccgaggtgggcagatcacctgaggttgggagtttgagaccagcctgaccaacatggagaga---ccccacctctactgaaaatacaaaaatagctgggcatg-----gt--ggtgcatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60643707 154 + 64156825 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784591 154 + 59248254 ---------gctgggcacgctggctta-cgcctgtaatcccagcacgttgggagaccaaggcaggtggatcgcctgaggtcaggaggtcgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccaggcgtg-----gt--ggtgcatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3467929 142 - 51301725 ---------gccaggtgtggtggctca-cacctgtaatcccagcactttgagaggccgaggtgggtggattacctgaggtcgggagttcaagaccagcatggtcaacatggtgaaa---tcccatctctactaaaaatacaaaa------------a-----tt--ggcgtgtg i papAnu2.chr19 I 48039 C 0 s chlSab2.chr6 47596581 154 + 50890351 ---------gctgggcacgctggctaa-cgcctgtaatcccagcacgatgggagaccaaggcaggtggatcgcctgaggtcaggagtttgagaccagcctgaccaacgtggagaaa---ccccgtctctactaaaaatacaaaatcagccgggcgtg-----gt--ggtgcatg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054493 106 - 122678785 gggatccctgggtggcgcagtggtttagcgcctgc----------ctttg---gcccagggcg---cgat--cctggagacctgggatcgaatcc-----------catgttgggc---tcccggtgc----------------------------------at--ggagcctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103345321 3096 - 106955855 M a score=11228.000000 s hg38.chr19_GL949753v2_alt 702025 4 + 796479 cctg s panTro4.chr19 59903725 4 + 63644993 cctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833215 4 + 60714840 cctg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654594 4 + 106955855 cctg i nomLeu3.chr10 I 3527 C 0 s rheMac3.chr19 60643861 4 + 64156825 cctg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784745 4 + 59248254 cctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3468071 4 - 51301725 cctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596735 4 + 50890351 cctg i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054599 4 - 122678785 cttc i canFam3.chr1 C 0 I 84 a score=166148.000000 s hg38.chr19_GL949753v2_alt 702029 83 + 796479 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgctgtgagccgagat--------tgcgcc-----------a s panTro4.chr19 59903729 83 + 63644993 cagtcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgctgtgagccaagat--------tgcgcc-----------a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833219 83 + 60714840 cagtcccagctactcgggaggctgaggcaggaatatcagttgaacccaggaggcagaggttgctgtgagccgagat--------cgcgcc-----------a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654598 94 + 106955855 tcatcccagctacttgggaggctgaggcagaagaatggcttgaacccgggaggcggaggctgcagtgaggtgagat--------cacacctttgcactccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643865 91 + 64156825 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctatgagctgagactgccattgcattcc-----------a i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55784749 91 + 59248254 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagctgagactgccattgcattcc-----------a i macFas5.chr19 C 0 I 1 s papAnu2.chr19 3468075 83 - 51301725 taatcccagctgcttgggaggctgaggcaggagaattgcttgaacccgggaggtggaggctgcagtgaggtgagat--------cacgcc-----------a i papAnu2.chr19 C 0 I 6558 s chlSab2.chr6 47596739 83 + 50890351 caatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggtggcggaggttgctgtgagccgagac--------tgtgcc-----------a i chlSab2.chr6 C 0 I 11 e canFam3.chr1 20054603 84 - 122678785 I a score=55278.000000 s hg38.chr19_GL949753v2_alt 702112 37 + 796479 cctgggcaacaagagtgagactcagtctc----------aaaaa----aaa s panTro4.chr19 59903812 31 + 63644993 cctgggcaacaagagtgag----agtctc------------aca----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833302 47 + 60714840 cctgggcaacaagagtgagactcagtctcaaaaaaaaaaaaaaa----aaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654692 42 + 106955855 actgggcaac-agagtgaaactctgtctc----aaaaaaaaaaa----aaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60643957 42 + 64156825 cctgggcaacaagagtgagactccgtctc---------aaaaaaaaacaaa i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55784841 38 + 59248254 cctgggcaacaagagtgagactccgtctc---------aaaaaa----aaa i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47888837 38 + 51301725 cctgggcaacaagactgagactccgtctc---------aaaaaa----aca i papAnu2.chr19 I 563 C 0 s chlSab2.chr6 47596833 35 + 50890351 cctgggcaacaagactgagactccgtcac---------aaaaaa------- i chlSab2.chr6 I 11 C 0 e canFam3.chr1 20054603 84 - 122678785 I a score=49099.000000 s hg38.chr19_GL949753v2_alt 702149 30 + 796479 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA s panTro4.chr19 59903843 30 + 63644993 aaaaaaaaTG------------ACGTGGTCCT------------ATTTCTCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833349 30 + 60714840 aaaaaaaaTG------------ACTTGGTCCT------------ATTTCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3654734 54 + 106955855 aaaaaaaaGGCTGATAGGGTGTACTCTGTCCTCCCAGAAGAATGACTTTTCCCA i nomLeu3.chr10 C 0 I 1131 s rheMac3.chr19 60643999 30 + 64156825 aaaacaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784879 30 + 59248254 aaaaaaaaaa------------aCTTGTTCCC------------ATTTCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888875 30 + 51301725 caacaaaaaa------------acttgtTCCC------------ATTTCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596868 23 + 50890351 -------aaa------------aCTTGTTCCC------------ATTTCTCCCA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054687 30 - 122678785 AAAAAAAATA------------ATGTGTTCCC------------ATTCTTCTGG i canFam3.chr1 I 84 C 0 a score=401368.000000 s hg38.chr19_GL949753v2_alt 702179 168 + 796479 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG s panTro4.chr19 59903873 168 + 63644993 CAGGTTGGTGTCTTGTTCCGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCTTTCTGCAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833379 168 + 60714840 CAGGTTGGTGTCTTGTTCCACTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGTCAACCAGTCCCTGACGTGCGTAAACCTCTCCGACAATGAGCTTCTGGATGAGGGTGCTAAGTTGCTGTACACAACTTTGAGACACCCCAAGTGCCTTCTGCAGAG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644029 168 + 64156825 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAGTGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55784909 168 + 59248254 CAGGCTGGTGTCTTGTTCTGCTACCACCCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47888905 168 + 51301725 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGACACCCAAAGTGCTTCCTGCAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47596891 168 + 50890351 CAGGCTGGTGTCTTGTTCTGCTACCACTCAGCAGTGGGCTGATCTCTCCTTGGCCCTTGAAGCCAACCGGTCCCTGATGTGCGTAAACCTCTCCGACAATGAGCTCCTGGATGAGGGTGCCAAGTTGCTGTACACAACTTTGAGGCACCCAAAGTGCTTCCTGCAGAG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20054717 168 - 122678785 CAGGTTGGTATCTTGTTCTGCCACCACTCAGCAATGGGCCCATCTCTCCTCCTCCCTCAAAATCAACCAGTCCCTGACATGCCTGAACCTCACAGCCAATGAGCTCCCAGATGAGAGTGCCAAGTTGCTGTGCACAACTCTGAGACACCCAAAATGCTTCCTGCAGAG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=1199461.000000 s hg38.chr19_GL949753v2_alt 702347 486 + 796479 GTTGTCGTAAGTCTCTCC-TCTCTTAC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTGTTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGACCTGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTGTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT s panTro4.chr19 59904041 485 + 63644993 GCTGTCGTAAGTCTCTCC-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAAT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG--TCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATTTTATTCTTCTCTCATTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAAGGTGGGGAGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------TAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGAATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56833547 486 + 60714840 GTTGTCGTAAGTCTCTCG-TCTCTTCC--AGAGCAGCTGTGCTTTCG-ATCTGGGGCCACA----GACGAGCAGT-GGTCATGCCTGACTTGGCTG---------TATGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCCTGTGAATCTTGTTCTTCTCTCTTTCCTATTCCTTCATAGGATCACCAGTGCATGATAGAGGGTGGGGGGTT--------------------------------CACAAGAAGGGGCTTTTGGATG------CTGGCACTTGTGGAGCTAGCCGGGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTCTG--------CAGGTTGGAAAACTGTCACCTTACAGAAGCCAATTGCAAGGACCTTGCTGCTGTCTTGGTTGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACCCCATTGGGGATACAGGGGTGGAGTTGCTGTGTGAGGGCTTGAGGTACCCCGAGTGTAAACTGCAGACCTTGGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644197 482 + 64156825 GTTGTCGTAAGTCCCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACAGCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTTTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785077 482 + 59248254 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-GTCGGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGCAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCCTTCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCATGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889073 482 + 51301725 GTTGTCGTaagtctctccttttcttcc--agaGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACGGGGCGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-CTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CTGGCATT--TGGAGATAGCCGAGAAGGTTGAA-GTTGGAAATGTC--AACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAACTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597059 482 + 50890351 GTTGTCGTAAGTCTCTCCTTTTCTTCC--AGAGCAGCTGTGGTTTCG-ATCTGGGGCCATA----GACAGGGAGT-GGTCACGCCTGACTTGGCTG---------TTTGGAACCTCTCGCTGATGTGAACACCTG-TTCCCATGTTTAGATCCAGGCCGATGGCTTGTGAATCTTG---TTCTCTCATGCCTGTTCCTTCATAGGATCACCAGCGTGTGACAGAGGGTGGGGCGTT--------------------------------CACAAGAAGGGGCTTTCGGATG------CCGGCATT--TGGAGATAGCCGAGAGGGTTGAA-GTTGGAAATGTC--CACCGTGTTGCCATT--TGTGATTCTTTTG--------CAGGTTGGAAAACTGTCACCTGACAGAAGCCAATTGCAAGGACCTTGCTGCTGTTTTGGTGGTCAGCCGGGAGCTGACACACCTGTGCTTGGCCAAGAATTCCCTCAAGGATACAGGGGTGAAGTTTCTGTGTGAGGGCCTGAGCTACCCCGAGTGTAAACTGCAGGCCTTGGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 0 489 + 138250 GTTGTCGTAAGTGTCT---TCTCTT-C--AGAGCAGCTGTGGTTTCC-GTCTGGGGCGGTA----GATGAGAAAC-GGTCATGGCTGGCTTGGCTG---------TGTGGAGCCCCTCGCTGATAGGAACCCCTG-TTCCCATGTTGAGATCTGGACAGATGGCTTCTCAGTCTTGTTCTTCTCTCGTTCCTCCTCCTTCAGATGATCACCAGGGTGTGAGAGAGGGTGGGGAGTT--------------------------------CACGAGAA-GGGCTTTGGGATG------CTAGCGTT--TGGAGATGGCCGAGAAGGCTGAA-ATTGGAAATGTC-TCACCATGTTGCCATT--TGTGATTCTTTTGTTCTAACACAGGTTGGAAAACTGTCACCTTACAGAAGCTGATTGCAAGGACCTGGCTGCCGTTTTGGTTGTCAGCCGGGAGCTGATGCACCTGTGCTTGGCCGAAAACCCCCTCGGGGATACAGGGGTGAAGTTTCTGTGTGAGGGCTTGAGTTACCCCGAGTGTAAACTACAGACCCTGGT i calJac3.chr22_GL285922_random N 0 I 8 s canFam3.chr1 20054885 543 - 122678785 ACTGTCGTAAGTACTGCC-TCTCTCCCTGGGAGCATCTCTTTTCCTATGTTTGGGGCCACATAGGGAAGAGCAGTGGGTAAAATCTGGATTTGCTGGACTACCCATATGGGACCTCCTACTGATGTGGACACCTGGTTCCCATTTCTGGTCCCAGGTATGTGGCTCATGCATCTTATCATTCCCTCATCCTTCCTTCATGATTGAGTGTTAAGCACATGATGAGAgctatagagctatagatgctatagatgagctatagatgTTAAGCACAAGATGAGCCAT--AGATGGGGCCTCTGGCCTT--TAGGGACAGCCAAGAAAATTGGGTTTTGGAAATGTTCTCACCCTCTTACCATTTGTGTGGTGCTTTGG--------CAGGTTGGAAAACTGTCAACTTACAGAAGCCTGTTGCAAAGAGCTCTCTTCAGCTTTGATTGTCAACCAGAGGCTGACGCACCTGAGTTTGGCAAAGAACACTCTGGGAGATGATGGGGTAAAGCTTCTGTGTGAAGGCTTGAGTTACCCTGACTGTCAACTACAGATGCTGGT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3654788 1131 + 106955855 I a score=146230.000000 s hg38.chr19_GL949753v2_alt 702833 86 + 796479 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACGCCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA s panTro4.chr19 59904526 86 + 63644993 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTTTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTTGTTATGAGAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834033 86 + 60714840 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C--TGTGTGCGTGGGTGTATATGCACACACCCCCCAC-------------CTCCGGGTTTGAGTAGGGTGGTTATGAGAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655919 77 + 106955855 GTAAGTCCCtgttgggggt----------------------------------------------------g--tgtgtgtgtgtgtgtatgtgtgtgCAC----------------------GTGAATTCAAGCAGGAGAGAGATGAAAGTA i nomLeu3.chr10 I 1131 C 0 s rheMac3.chr19 60644679 125 + 64156825 GTAAGTCTGCACTGGCtgc------------gtgtgtgtgtgtgtgtgtgtgtgtgtacatagctggctgcc--tgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTAGTAGGGTGGTTATGAGAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785559 139 + 59248254 GTAAGTCTGCACTGGCTGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtACATAGCTGGCTGCCtgtgtgtgtgtgtgtgtatgtACATA-GCCCCCCAC-------------CTCTGGGTTCTGGTAGGGTGGTTATGAGAACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889555 83 + 51301725 GTAAGTCTGTGCTGGctgc----------------------------------------------------c----tgagtgtgtgtgtgtgtacata-gtcCCCCAC-------------CTCCAGGTTCTAGTAGGGTGGTTATGAGAACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597541 83 + 50890351 GTAAGTCCGTGCTGGCTGC----------------------------------------------------C----TGTGTGTGTGTGTATGTACATA-GCTCCCCAC-------------CTCCGGGTTCTAGTAGGGTGGTTATGAGAACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 497 96 + 138250 CCAAGTCCCTGCTGACTGC----------------------------------------------------C--TGTGTGCGTGGATGTATATGCATA---CCCCCATGCGCACACACACACGCTGGGTTCGAGTACGGTGTTTATAAGAATA i calJac3.chr22_GL285922_random I 8 I 317 s canFam3.chr1 20055428 64 - 122678785 GTAAGTCCATGCTAGTTAT----------------------------------------------------T----------TGTGTGCATGTGCATA-------------------------CTGGATTCAAGTAGCACAGATGCAAGCA-- i canFam3.chr1 C 0 C 0 a score=38330.000000 s hg38.chr19_GL949753v2_alt 702919 16 + 796479 C---TTAAT---TCCTCTAAAA s panTro4.chr19 59904612 16 + 63644993 C---TTAAT---TCCTCTAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834119 16 + 60714840 C---TTAAT---TCCTCTAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 3655996 19 + 106955855 CTTGTTAAT---TCATTTCAAA i nomLeu3.chr10 C 0 n 0 s rheMac3.chr19 60644804 16 + 64156825 C---TTAAT---TCCTCTAAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785698 16 + 59248254 C---TTAAT---TCCTCTAAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889638 16 + 51301725 C---TTAAT---TCCTCTAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597624 16 + 50890351 C---TTAAT---TCCTCTACAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 910 16 + 138250 C---TTAAT---TTCTCTCAAT i calJac3.chr22_GL285922_random I 317 C 0 s canFam3.chr1 20055492 19 - 122678785 ---TTTAATAGCTTCTCTGAAT i canFam3.chr1 C 0 C 0 a score=67997.000000 s hg38.chr19_GL949753v2_alt 702935 31 + 796479 GTTCCAAGCATGATGCTAATG---ACAACTGGTA s panTro4.chr19 59904628 31 + 63644993 GTTCCAAGCATGATGCTAATG---ACAACTGGTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834135 31 + 60714840 GCCCCAAGCATGATGCTAATG---ACAACTGGTA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644820 34 + 64156825 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785714 34 + 59248254 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889654 34 + 51301725 GCCCCAAGCATGATGCTAATGGTTACAACTGGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597640 31 + 50890351 GCCCCAAGCATGATGCTAATGGTtagtagta--- i chlSab2.chr6 C 0 I 17 s calJac3.chr22_GL285922_random 926 34 + 138250 GCTCCAAGCATGATGCTAATGTTTATAACTGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20055511 30 - 122678785 ACCCCAAGTATGATACTGAC----AGATCTGATG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I a score=58567.000000 s hg38.chr19_GL949753v2_alt 702966 28 + 796479 AGACCTGGGTAGATGATGGTAGGAAAAA s panTro4.chr19 59904659 28 + 63644993 AGACCTGGGGAGATGATGGTAGGAAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834166 28 + 60714840 AGACCTGGGGCGATGATGATAGGAAAAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644854 28 + 64156825 AGATCTGGGGAGATGGTGATAGGAAAAA i rheMac3.chr19 C 0 I 19 s macFas5.chr19 55785748 28 + 59248254 AGATCTGGGGAGATGGTGATAGGAAAAA i macFas5.chr19 C 0 I 37 s papAnu2.chr19 47889688 28 + 51301725 AGATCTGGGGAGATGGTGATAGGaaaaa i papAnu2.chr19 C 0 I 7 s calJac3.chr22_GL285922_random 960 28 + 138250 AGACCTGGGGAGACGATGATAGGAAAAA i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20055541 28 - 122678785 AGACCTGGCAAGAGGATGTTAAAAAAAA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47597671 17 + 50890351 I a score=112972.000000 s hg38.chr19_GL949753v2_alt 702994 72 + 796479 agtataagtagtagtaga-gt-----------------------------agtagtaataTTCTATAGGGATTTGGGGAATGTAGCTGGTTTTCGGG---------TTTTT s panTro4.chr19 59904687 65 + 63644993 AGTATAAGTAGT-----A-GT-----------------------------AGTAGTAAT-TTCTATAGGGATTTGGACAATGTAGCTAGTTTTCAGG----------GTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834194 76 + 60714840 AGTATAAGTAGT-----A-GT-----------------------------AGCAGTAATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGGGTTCtttttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644901 70 + 64156825 agtagtagtagt-----a-gt-----------------------------agtagtaataTTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GTTTTTTT i rheMac3.chr19 I 19 C 0 s macFas5.chr19 55785813 70 + 59248254 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTTGGAGAATGTAGCTGGTTTTCAGG------GGTTTTTT i macFas5.chr19 I 37 C 0 s papAnu2.chr19 47889723 70 + 51301725 agtagtagtagt-----a-gt-----------------------------agtagtaatatcCTATAGGGATTTGGAGAACGTAGCTGGTtttcagg------ggtttttt i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47597688 48 + 50890351 agtagtagtagt-----a-gt-----------------------------agtagtaATATTCTATAGGGATTT----------------------G------GTTTTTTT i chlSab2.chr6 I 17 C 0 s calJac3.chr22_GL285922_random 994 87 + 138250 AGAAGTAGTAGT-----A-GTATAAAAAAAGAAGAAAATGAAAATAAAAAAGTAGTAATATTCTGTAGGGATTTGGAGGATGTAGCTG--------G----------tttt i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20055569 66 - 122678785 --AAAAAGCAAG-----ACAT-----------------------------AGTGTCAATATTCCATAGGAATTTGGGGGATGTAGCTGATTTCCAGG------GTTTT--- i canFam3.chr1 C 0 I 1311 e nomLeu3.chr10 3656015 0 + 106955855 I a score=441966.000000 s hg38.chr19_GL949753v2_alt 703066 234 + 796479 TTTTTCC----------------------------------------TCTTTATGTATGTATGTAttttagagatgggatctcgccgtgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaagtgctagaattacaggcatgagccatgtcaccccatgctG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- s panTro4.chr19 59904752 234 + 63644993 TTTTTCC----------------------------------------TCTTTATGTAtgtatgtattttagagatggggtctcaccatgttgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggtctcccaaagtgctagaattacaggcatgagccaTGTCACCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTACTTAT-------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834270 199 + 60714840 tttttcc----------------------------------------tctttatgtatgtatgtattttagagatggggtctcgccatattgcctaggctggtctcaaactcctgagctcaagagatctgcctgccttggcctcccaaaatgctagaattacaggcatgagccaTGTCACTCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGAACTATAAC--TGTAACATAAATTGC-------------------------------------------- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60644971 272 + 64156825 TTTTTCCATTTGGAGAATGTAGCTGGTTTTCAG--GGGGTTTTTTTTTTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtcttaaactcccgagcgcaagaggtctgcctgccttggcctcctaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55785883 234 + 59248254 TTTTTTC----------------------------------------CTCCTCTTTATGCATGTAttttagagatggggtctcgctatgttgcccaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATCATTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47889793 235 + 51301725 ttttttt----------------------------------------ctcctctttatgcatgttttttagagatggggtctcgctctgttgcctaggctggtctcaaactcccgagcgcaagaggtctgcctgccttggcctcccaaagtgctaggattacaggcgtgagccatctcgCCCCATGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTCTAATTGTGTAACATAAATTGCATGCAGTTTGGTTGTAAatggaattcatttattt---------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47597736 271 + 50890351 TTTTTTCCTCCTCTTTATGCATGTATTTTAGAGATGGGGTCTCG---CTCCTCTTTATGCATGTAttttagaggtggggtctcgctctgttgtctaggctggtttcaaactcctgagcgcaagagatctgcctgccttggcctcccaaagtgctaggattacaggcatgagccatctcgcccCACGCTG-TGTTTTCTCTTAATCTGTGTTCTTAGACCTATAGTTGTGTAACATAAATTGCATGCAA-TTGGTTGTAAATGGAATTCATTTATTT---------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1081 243 + 138250 ctttttc----------------------------------------tctttttttatgtatatattttagacgtggggtcttaccatgttgcctaggctggtctcaaactcctgagctcaagccatctgcccatcttggcctcccaaaatgctgggattacaggcctgagccatcgcacccCACCTTGTTTTTTTCTCTTAATCTGTGTTCTTAGAACTATAGCTGTATAACGCAAATCACAGGTAA-TTGGTTGTAGATGGAAGCTATTTTCTT--TCTCttat i calJac3.chr22_GL285922_random C 0 I 314 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=71079.000000 s hg38.chr19_GL949753v2_alt 703300 45 + 796479 TTTTTAATGAATGATTTGCAAATCAGGTAGTCTTCTGGGCCAGTG s panTro4.chr19 59904986 45 + 63644993 TTTTTaatgaatgatttgcaaatcaggtagtcttctgggccagtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56834469 24 + 60714840 ---------------------ATCAGGTAGTCTTCTGGGCCAGTG i ponAbe2.chr19 C 0 I 3879 s rheMac3.chr19 60645243 36 + 64156825 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786117 36 + 59248254 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890028 36 + 51301725 ---------aatgatttgcAAATCAGGTAGTCTTCTGGGCCATCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598007 36 + 50890351 ---------aatgatttgcaaatcaggtagtcttctgggccatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1638 45 + 138250 TTTTTaatgaacgatttgcaaatcacgcagcctcctgagccagtg i calJac3.chr22_GL285922_random I 314 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=230024.000000 s hg38.chr19_GL949753v2_alt 703345 134 + 796479 TACGCTCAGACTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTTTTAATACTAAAATCACAGGACACGTggcctggcatagtggctcacgcctataatcccatcaccttgggaggccgaa s panTro4.chr19 59905031 134 + 63644993 tacgctcagactccCAATGGAAGCTATTGGAAGCTACATGCTCAATGTGATCCTCCTGTTAATACTAAAATCACAGGACACGTggcctggcacagtggctcacgcctataatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645279 134 + 64156825 taggctcagactccCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55786153 134 + 59248254 taggctcagaCTCCCGACGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTCAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacgcctgtaatcccagcactttgggaggctgaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47890064 134 + 51301725 TAGGCTCAGACTCCCAGTGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTTAAATCACAGGACAggtggcctggcacagtggctcacgcctgtaatcccagcaccttgggaggccgag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598043 134 + 50890351 taggctcagaCTCCCAATGGAAGCTATTGGAAGCTACATGCTCAATATGATCTTCCTGTTAATACTAAAATCACAGGACAGGTggcctggcacagtggctcacacctgtaatcccagcaccttgggaggccgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1683 132 + 138250 taggct--GACTCTCTGGGGAAGCTATTGGAAGCTACACGCTCAATATAATCCTCCCGTTAATACTAAAATCATAGGATGGGTAgccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I a score=-1300.000000 s hg38.chr19_GL949753v2_alt 703479 3 + 796479 gc-a s panTro4.chr19 59905165 2 + 63644993 gc-- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60645413 3 + 64156825 gca- i rheMac3.chr19 C 0 I 639 s papAnu2.chr19 47890198 2 + 51301725 gc-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598177 2 + 50890351 gc-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1815 2 + 138250 gc-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C a score=119109.000000 s hg38.chr19_GL949753v2_alt 703482 154 + 796479 aggcagatcccttgagggcaggagttcaagaccagcctgcccaacatggtgaaacattgtctctctactaaaaatacaaaaattagtcacgcatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac s panTro4.chr19 59905167 154 + 63644993 aggcagatcccttgagggcaggagttcgagaccagcctgcccaacatggtgaaacattgtttctctactaaaaatacaaaaattagtcaggcatggtgggacatgcctgtaatcccagttactgagaaggctaaggcaggagaatcacttgaac i panTro4.chr19 C 0 I 891 s papAnu2.chr19 47890200 154 + 51301725 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacaaaaattagctggggatggtgggatatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598179 154 + 50890351 aggaagatcccttgaggccaggagttcaagaccagcctggccaatatggtgaaacatcgtctctctactaaaaatacgaaaattagctggggatggtgggacatgcctgtaatcccagttactcaggaggctaaggcaggagaatcacttgaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1817 152 + 138250 gggcagatcccttaagggcagaagttcaagaccagcctggccaacacagtgaaacccca--tctctactaaaaattaaaaaattagccaggcggggtgatatatgtctgtaatcccagttactcagaaagctgagtcaggagaatcacttgaac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=109358.000000 s hg38.chr19_GL949753v2_alt 703636 266 + 796479 ttcggaggtggaggttgcagtgagctgagatggcaccactgaagtccagtctggccaatagagca--agactctctc-aaaaaaaaaaaaTTATAGGACAAATCTTTAGAAAGGAATTGGggcctggcatggtggctcatgcctgtaatctcagcactttaggaggc------gggcagaacacctgaggtcaggagtttgagaccagcctggctgatgcagtgaaaccctgtctctactaaaaatacaaaaattagctaggcgtggtggtatgg s papAnu2.chr19 47890354 270 + 51301725 ctgggaggtggaggttgcagtgagctgagattgcaccacttctgtacagtctgggcaatagaacaagacacTCTCTC----CAAGAAAAATTATAGGACACGTCTTTAGAAAGGAATTGAGttctggcgcggtggctcacgcctgtagtctcagcactttgggaggccgaggtgggcagatcacctgaggtcaggagcttgagaccagcccgaccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgTGG i papAnu2.chr19 C 0 M 377 s chlSab2.chr6 47598333 265 + 50890351 ctgggaggtggaggttgcagtgagctgagattgtaccacttctctacagtctgggcaataga-----acactctctc----caagaaaaaTTACAGGACACATCTTTAGAAAGGAATTGAGTTCTggcacggtggctcatgcctgtagtctcagcactttgggaggccggggtgggcagatcacctgaggtcaggagcttgagaccaacccggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgt-gtggtgtgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 1969 273 + 138250 tcggaaggcagacgttgcagtgagctgagactgcaccactgcagtccagtctgggaaatagagta--agactgtttaaaaaaaaaaaaaaTTACGGGACGAATCTTTAGAAAGGAATTAGggctgggcactgtggctcacgcctgtaatctcagcactttcagaggccaaggcgggcaggtcacctgaggtcaggagtttgagaccagcctggccaatattgtgaaaccccgtctctactgaaaatacaaaaattagctgggcatggtggtgcgt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=31368.000000 s hg38.chr19_GL949753v2_alt 703902 166 + 796479 tcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaagtcgggagg------ttgcagtgagccgagatcgtgccagcctgggtgacagaacgagattgtctcaaaa----------aaaaaaaaaaaTTGTATCTGCACTGATGGTTTCTGTTCAGAGATTCGATTTTA s chlSab2.chr6 47598598 180 + 50890351 tcctgtaatcccagctacttgggaggctgaagcaggagaatcacttgaagccaggaggcagagcttgcagggagccaagatcgtgccagcctgggcaacagaacgagattgtctcaaaaaataaaaaataaaaaataaaaTTG--TCTGCACTGATGGTTTCCGTTCAGAGATTCGATTTTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2242 166 + 138250 gcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggagc-agaggttacagtgagccgagatggc----acctgggtgacagaacaagactgtctcaaaaaacaaaaca-aaacaaaaaaaCTGTGTCTGCACTGATGGTTTCTGTTCAGAGA---------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e papAnu2.chr19 47890624 377 + 51301725 M e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=23234.000000 s hg38.chr19_GL949753v2_alt 704068 87 + 796479 TGTTAACATCTCTGGTAttttttttttt----tttttttaag-atg--------gagttttactc---ttgcccacgctgg----caatggcatgatctaggctcac s papAnu2.chr19 47891002 98 + 51301725 TGTTAACatctctggtattttttttttttttctttttttaagtatg--------gagtcttgctc-tgttgcccaggctggagtacaatggcgtgatcttggctcat i papAnu2.chr19 M 377 C 0 s chlSab2.chr6 47598778 91 + 50890351 TGTAAACATCTCTGGTAttttttttt------cttttttaag-atg--------gagtctagctc-tgttgcccaggctggagtgcaatggcgtgatcttggctcct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2408 84 + 138250 ------------------Ctttttttct----cttttttgag-acggagcttcagagtttcgctcttgttgcccagcctggagtgcagaggcacaatctcggctgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I e panTro4.chr19 59905321 891 + 63644993 I a score=11630.000000 s hg38.chr19_GL949753v2_alt 704155 27 + 796479 tgcaacctccggct-tcaaggaggttga s panTro4.chr19 59906212 27 + 63644993 tgcaacctccggct-tcaaggaggttga i panTro4.chr19 I 891 C 0 s papAnu2.chr19 47891100 22 + 51301725 tgcaacttccggct-tcaag-----cga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598869 22 + 50890351 tgcaacttccggct-tcaag-----cga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2492 28 + 138250 cacaacctctgcctctctgggaggtgga i calJac3.chr22_GL285922_random C 0 I 59 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=216936.000000 s hg38.chr19_GL949753v2_alt 704182 483 + 796479 ttctcctgcctcagcctcctgagtagctgggattacaggcactcaccaccacgccgggctaatttttatatttttagtagagatgggatttcaccatgttggccaggttggtctcgaact---gacctcatgatccgcccgcctcagccttccaaagtgctaggatttacaggcatgagccactgcgtccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACATTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCGACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTtgtgtg s panTro4.chr19 59906239 485 + 63644993 ttctcctgcctcagcctcccgagtagctgggattacaggcactcaccaccacgccgggctaatttttgtgtttttagtagaaactggatttcaccatgttggccaggctggtctcgaactcctgacctcatgatccgcccgcctcagccttccaaagtgctgggatt-acaggcatgagccactgcgcccagccAT--ACATATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTAGGAACTGTCCTCTTCCTATGAAGTAAC--TAATCTAGGATATGTACCTGGCATCTGAAAACTACCCACTTAAATTTAATGACATATTCAGTTCATGGCTGGAGACGATGAGTAGAAGGAAAGGATTCTTCCCACACCCACTATATCTAGGCCCTGAAACACTAAAAAAGAAGTCCCACAAGCAGTGAGATGTCACCCACTCACTAACTGTATCTTCAAATGAATGTCTAGTTTTTTTGGTTGTGTG i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891122 462 + 51301725 ttctcctgcctcagcctcctgagtagctgggactacaggcgc---ccaccacgtctggataatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcgtgatctgcccacctcagtcttccaaagtgctgggatt-acaggaatgagccaccgcgcctggcc----atacaTCTCTGGTATTCTTTGTTTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATCTAGGATATGCACCTGGCATCTGAAAACTA-CCAC-----TTTAATGACATACTCAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------CATCTTCAAATTAATGTCTAGTTTTCTTGGttttgtg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47598891 470 + 50890351 ttctcctgcctcagcctcctgagtagctgggactacaggcacccaccaccacatctggctaatttttgtatttttagtagagatggg-tttcaccacgttggccaggctggtctcgaactcttgacctcatgatctgcccacctcagtcttccaaagtgctggaatt-acaggcatgagccaccgcacctggccATGTATACATCTCTGGTATTCTTTGTCTCTAACATCACCTCCAACAGTTGGGAACTGTCATCTTCCTATAAAGTAGCTTTAATGTAGGGTATGCACCTGGCATCTGAAAACTACCCAC-----TTTAATGACATACTGAGTTCGTGGCTGGA---GATGGGTAGAAG----GGATTCTTCCTACACCCACTATATTTAGGCCCTGAAACACTAAAACCGAAGTCCCACAGGCAGTGAGATGTCACTCACTTGC------TATCTTCAAATTAATGTCTAGTTTTCTTGGTTTTGTG i chlSab2.chr6 C 0 I 349 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=6355.000000 s hg38.chr19_GL949753v2_alt 704665 82 + 796479 tgtgtgtggtgtgtggtgtgtgtgGTATTTTTTTGGGGGGGGGGGGGTTTTCttttttttttttttttggtttttttttttt s panTro4.chr19 59906724 73 + 63644993 TG------GTGTGTGGTGTGTGTGGTATTTTTTTGGGGGGGGGG---TTTTCtttttttttttttttggttttttttttttt i panTro4.chr19 C 0 I 2 s papAnu2.chr19 47891584 48 + 51301725 ---------tatgc-atgtgtgtggt-tttttttgt-----------ttttgttttgtttttttttttga------------ i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e chlSab2.chr6 47599361 349 + 50890351 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 704747 1 + 796479 g s panTro4.chr19 59906799 1 + 63644993 g i panTro4.chr19 I 2 C 0 s papAnu2.chr19 47891632 1 + 51301725 g i papAnu2.chr19 C 0 I 305 s chlSab2.chr6 47599710 1 + 50890351 g i chlSab2.chr6 I 349 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=119847.000000 s hg38.chr19_GL949753v2_alt 704748 239 + 796479 atagtcttgctctgtcgcccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggtgtgattctcctgcctcagcctcccagggattaaggtgcatgccaccacgcccagctaacttctttatttttagtagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct s panTro4.chr19 59906800 237 + 63644993 atagtcttgctctgtcacccaggctggaatgcagtggctccatctcagctcactgcaacctccacctcctgagttcaggcg--attctcctgcctcagcctcccaggaattaaggtgcatgccaccacgcccagctaacttctgtatttttaggagagacgagttttcaccatgttggtcaagctggtctcgaattcctgacctcaggtgatccacccacctcagcctcccaaagtgct i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47891938 237 + 51301725 aTAGTCTTGCTcagtcgtccaggctagagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacaccaccacgcctagctaacttctgtgtttttagtagagacgaagtttcaccacgttggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i papAnu2.chr19 I 305 C 0 s chlSab2.chr6 47599711 237 + 50890351 atagtcttactcagtcatccaggctggagtgcagtggtgccatctcagctcactgcaacctccgcctcctgagttcaagcg--attctcctgcctcagcctcccagggattaaggtgcacgccaccacacccagctaacttctgtgtttttagtagagacgaagtttcaccacattggtcaggctggtctcgaactgctgacctcaggtgatccgcccacctcagcctcccacagtgct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e nomLeu3.chr10 3656015 0 + 106955855 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=136297.000000 s hg38.chr19_GL949753v2_alt 704987 164 + 796479 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag s panTro4.chr19 59907037 164 + 63644993 gggattacaggtgtgagccaccgtgccggccCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATT--ACAGTCATGGAAGTTTCTAGAAGGCCGGGTAGGGT-----------------------ctttgagaggccgag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348417 166 - 106955855 GGGATTACAGGTGTGAGCCACCGTGCCAGCCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATTACACAGTCAGGGAAGTTTCTAGAAGGCCAGTTATGGT-----------------------ctttgggaggccgag i nomLeu3.chr10 M 3096 C 0 s papAnu2.chr19 47892175 189 + 51301725 gggattacaggcgtgagccattgtgccggTCCCCTCAATTCAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCTCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAGactaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47599948 189 + 50890351 gggattacaggcgtgagccatcgtgcTGGTCCCCTCAATTGAACTTTTTGATCCATGCCCCTATTTTGCTAAGTTGTCAACTTCCCTTTAGTCTTATGTGGGTTTTCCTCCATCACACAGTCATGGAAGTTTCTAGAAggctaggtacggtggctcacgcctgtaatcccagcactttgggaggctgaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e macFas5.chr19 55786287 0 + 59248254 C e rheMac3.chr19 60645416 639 + 64156825 I a score=298201.000000 s hg38.chr19_GL949753v2_alt 705151 261 + 796479 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaagttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa------------aaGTTTCTATACATTCATA s panTro4.chr19 59907201 259 + 63644993 gcaggtggatcatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccaggcgtggtgtcgga-gcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgtactccagcctgggtgtcagagcgaga--ctgtctcaaaaaaaaaaaaaaaa--------------GTTTCTATACATTCATA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103348583 276 - 106955855 gcaggtggatcatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctttactaaaaatacaaaaattagccatgcatggtgtcagatgcctgtaatcccagcttacttgggagggtgaggcagagaattgcttgaacccgggaggtggaggttgcagtgagccgagattgtgccactgtactccagcctgggcgtcagagcgagactctgcctcaaaaaaaaaaaaaaaaaaaaaaaaaaGGAAGTTTCTATACATTCATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786287 252 + 59248254 gcagatggatcataaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgcggtgtcggatgtctgtaatcccagc-tacttaggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccgagactgtgctcctgtactccaacctgggcgtcagagcaaga--ctgtctca-----gaaaaaaaaa--------------GTTTCTGTACATTCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47892364 251 + 51301725 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaatcccatctttactaaaaatac-aaaattagccaggcgtgatgtcggatgtctgtaatcccagc-tgcttgggagggtgaggcagagaattgcttgaacccaggaggcggaggttgcagtgagccaagactgtgctcCTGTACTCCAACCCGGGCGTCAGAGCGAga--ttgtctca------aagaaaaaa--------------gtttctgtACATTCACA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47600137 252 + 50890351 gcaggtggatcatgaggtcaggagttcaagaccagcctggctaatac-gtgaaaccccatctttactaaaaatac-aaaattagccaggcgtggtgtcagatgtctgtaatcccagc-tacttgggagggtgaggcagagaattgcttgaacccaggaggcggaggtcgcagtgagccaagactgtgctcctgtactccaacctgggcgtcagagcgaga--ctgtctca-----gaaaaaagaa--------------GTTTCTGTACATTCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e ponAbe2.chr19 56834493 3879 + 60714840 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=781045.000000 s hg38.chr19_GL949753v2_alt 705412 494 + 796479 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTTCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcatgttagggaggccagggtgggcagatcatctgaggtcgggagttcaagaccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgtgtgtacacacacac----acccccct s panTro4.chr19 59907460 492 + 63644993 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCCATCGTCATGGACTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TAAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTGGGATCCTAGTACCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGAAAGACACTACCTCTCTAGCAACTGAATTTAGCAAATACAATCgtaatcccagcacgttagggaggccagggtgggcagatcgtctgaggtcgggagttcaagaccagcctcgccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgcgca----------------------------------tgcgtgtacacacacac------ccccct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838372 478 + 60714840 AAGTTTCAAGATTTGGGGGTGTGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCATCTATTTCCAAGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTCACTTGGGACCCAGAGATACATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGA------AGC-TAAGGTGAA--------------CTGTGTTGGTTAATATCTAGGATCCTAGTAGCAGAT-ATGTTGGAGTGTGAGCTGGTGTCTTCTGCCTGTAAGACACCACCTCTCTAGCAACTGAATTTAGGAAACAGAATCgtaatcccagcacgttagggaggccagggtgagcagatcgtctgaggtcgggagttgaagaccaacctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcatgcgaa----------------------------------cgcgtgtacacacacacacacacacccct i ponAbe2.chr19 I 3879 C 0 s nomLeu3.chr10 103348859 496 - 106955855 AAGTTTCAAGATTTAGGGGTGTGTTTTCACTCCTCCGTCATCATGGGCTCCAATCTGCCATCTATTTCCAAGGTCCTTCCAGGTCCTGTGTCCCTCAGCTAATGGTATACTTCTCTTGGGACCCAGAGATAAATGGGCATTATAGTTCAAATTATAATTAAGT-TTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAGC-TGAGGTGAAATATCTCTGATAATCTGTGTTGGTTAATATCTAGGATCCTAGTACCAGAC-ATGTCAGAGTCTGAGCTGGTGTCTTCTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATCgtaattccagcacgttagggaggccagggtgggcagaccgtctgaggtcgggagttcaataccagcctggccaacatggggaaaccctgtctctactaaaaatacaaaacttagctgggtgtggtggcacgtgca----------------------------------cacgcatacacacacac--acacacctct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55786539 530 + 59248254 AACCTTTAAGATTTGGGGGGATGTTTTCACTCCTCTGTCGTCATGGGCTCCAATCTGCCCTCTATTTCCATGGCCCTTCCAGGTCCTGTGTCCCTCGGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCATTATAGTTCGAATTATAGTTAAGGTTTAGAACTCTATTGAGACAGAAGAAAGAAAACAGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacagaatttagccgggtgtggtggtacacacacacacacacacacacacacacacacacacacacacacacacacacacacac----acaacacg i macFas5.chr19 C 0 I 13 s papAnu2.chr19 47892615 486 + 51301725 GACCTTTAAGATTTGGGGATATGTTTTCACTCCTCTGTTGTCATGGGCTCCAATCTGCCCTCTATTTCTATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATGCTTTGCTTGGGACCCAAAGATATGTGGGCAT--TAGTTCAAATTATAGTTAAGG-TTAGAACTC--ttgagacagaagaaagaaaacagaacttaAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCCTACTACCAGATAACGTTGGAGTCTGAGCTGGCGTCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAAtagaattgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaatacagaacttagctgggtgtggtggtacacaca----------------------------------------cacacacacac----aaaacacg i papAnu2.chr19 C 0 I 13 s chlSab2.chr6 47600389 481 + 50890351 GACCTTTAAGATTTGGGGGTATGTTTTCACTCCTCTGTCATCATGGGCTCCAATCTGCCCTCTTTTGCCATGGCCCTTCCAGGTCCTGTGTCCCTCAGCTAGTGGTATACTTTGCTTGGGACCCAAAGATATCTGGGCATTATAGTTCAAATTATAGTTAAGG-TTAGAACTCTATTGAGACAGAAGAAAGAAAACGGAACTTAAGGTGAAATCTGTCTGATAAGCTGTGTTGGTTGGTATCTCAGATCTTACTACCAGAT-ACGTTGGAGTCTGAGCTGGCAGCTTTTGCCTGTAAGACACTACCTCTCTAGCAACTGAATTTAGGAAATAGAATtgtaatcccagcacattagggaggccaggatgggcagatcatctgaggccgggagttcgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaatacagaacttagccgggtgtggtggtacacaca------------------------------------------------cac----acaacacg i chlSab2.chr6 C 0 I 13 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I e rheMac3.chr19 60645416 639 + 64156825 I a score=276494.000000 s hg38.chr19_GL949753v2_alt 705906 120 + 796479 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaaaccaggaggcggaggttgaagtgagccaccgtgccaGCTgagaatcctttttacttctccaacttctgttggcca s panTro4.chr19 59907952 120 + 63644993 gtaatcccagctactcggaaggctggggcacaagaatcgcgtgaacccaggaggtggaggttgaagtgagccACCGTGCCCGCTgagaatcctttttacttctccaacttctgttggcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838850 120 + 60714840 gtaatcccagctactcagaaggctgggacacaagaatcgcgtgaacccaggaggcggaggttgaagtgagccaccgtgcccactgagaatcctttttacttcttcaacttctgttggcca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349355 117 - 106955855 gtaatcccagctactcggaaagctggggcacaagagtcgcgtgaacccaggaggcagaggttgaagtgagccACCGTGCCCGCTgagaatcttttttactt---caactcttgttggcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646055 120 + 64156825 gtaatcccagatattcggaaaactggggcatgagaatcgcgtgaaccggggaagcggaggttgaagtgagccaccgtgccTGCTgaggatcctttttacttctccagcttctgttggcca i rheMac3.chr19 I 639 C 0 s macFas5.chr19 55787082 120 + 59248254 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaacccgggaagcagaggttgaagtgagccACCGTGCCCGCTgaggatcctttttacttctccagcttctgttggcca i macFas5.chr19 I 13 C 0 s papAnu2.chr19 47893114 120 + 51301725 gtaatcccagatattcggaagactggggcatgagaatcgcgtgaactcaggaagcggaggttgaagtgagccactgtgcctgctgaGGATCCTTTTTACTTCTCCAGCTTCTGttggcca i papAnu2.chr19 I 13 C 0 s chlSab2.chr6 47600883 120 + 50890351 gtaatcccagatattcggaacactggggcatgagaatcgcgtgaacccgggaagcggaggttgaagtgagccACCGTGCCCGCTAAGGATCCTTTTTActtctccagcttctgttggcca i chlSab2.chr6 I 13 C 0 e canFam3.chr1 20055635 1311 - 122678785 I e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=451126.000000 s hg38.chr19_GL949753v2_alt 706026 164 + 796479 cctgcattccttggcttgtgg-cccttcctccaa---------cttcggcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa s panTro4.chr19 59908072 164 + 63644993 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacgttgccctggctcccttatca-cgtcacctcctgctggctttgactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56838970 164 + 60714840 cctgtattccttggcttgtgg-cccttcctccaa---------cttcagcacagcgtcttcacacgttgctctggctcccttatca-cgtcacctcctgctggcttggactctca-gctccctcttatgaggatccctgtgattg-ctggacctacccaaataa----accaggatataat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349472 163 - 106955855 cctgcattccttggcttgtgg-cccttcctccaa---------cttcagcagagcatctg-aaacgttgctctggctcccttatca-cgtcacctcctgctggctttgacgctca-gctccctcttacgaggatccctgtgattg-ctggacctacccaaataa----accaggatataaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646175 164 + 64156825 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttgactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787202 164 + 59248254 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-cgtcacctcctgctggctttcactgtca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893234 164 + 51301725 cctgcattccttggcttgtgg-cccttCCTCCAG---------CTTCAGCAGAGCATCTTCAAACATTGCTCTGGCTCCCTTATCA-CGCCACCTCCTGCTGGCTTTGACTCTCA-GCTCCCTCTTACAAGGATCCCTGTGATTT-CTGGACCTACCCAAATAA----ACCAGGATATAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601003 164 + 50890351 cctgcattccttggcttgtgg-cccttcctccag---------cttcagcagagcatcttcaaacattgctctggctcccttatca-catcacctcctgctggctttgactctca-gctccctcttacgaggatccctgtgattt-ctggacctacccaaataa----accaggatataaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20056946 181 - 122678785 cctgcatcccttggctcatggtcccttccttcatggccaaagccagcagcatagtgtcttcaaatgtccttctgtctttctcatcacctttcccccctgctggctttgactctcattctccttcttataaggatccttgtaattaccttggctcacctggataatctccccacctcctaga i canFam3.chr1 I 1311 C 0 e calJac3.chr22_GL285922_random 2520 59 + 138250 I a score=216064.000000 s hg38.chr19_GL949753v2_alt 706190 77 + 796479 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt s panTro4.chr19 59908236 77 + 63644993 ccatctt--aagatgctcagtcacctcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839134 77 + 60714840 ccatctt--aagatgctcagtcacatcta-----cgaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349635 77 - 106955855 ccatctt--aagatgctcagtcacatctt-----ctaggtcccttttg----------------ctcgcaggtgccaggagttgggacttggacatcttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646339 81 + 64156825 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787366 81 + 59248254 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccagaagttgggacttggacatctt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893398 81 + 51301725 GCATCTT--AAGAAGCTCAGTCACATCTAAGATGCGAGGTCCCTTTTG----------------CTCACAGGTGCCAGGAGTTGGGACTTGGACATCTT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601167 81 + 50890351 gcatctt--aagaagctcagtcacatctaagatgcaaggtcccttttg----------------ctcacaggtgccaggagttgggacttggacatctt- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2579 77 + 138250 ccatctcaaaagaTTCTCAGTCACTTCTA-----GGAGGTCCCTGTTG----------------CTGGCAGG-Gccagaggttaggacttggacatctt- i calJac3.chr22_GL285922_random I 59 C 0 s canFam3.chr1 20057127 87 - 122678785 ---tcct-----ttattcaaccacacctg-----caaagtcccctttgtatgtaacataacatattcacagggaccagggattatcacatagacatcttt i canFam3.chr1 C 0 I 106 a score=103333.000000 s hg38.chr19_GL949753v2_alt 706267 33 + 796479 aggggaggccattcttctgtccaccacaCCACC s panTro4.chr19 59908313 33 + 63644993 aggggaggccattcttctgtccaccacaCCACC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839211 33 + 60714840 aggggaggccattcttctgtccaccacaCCACC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349712 32 - 106955855 gggggaggccattcttctgtccaccacGCCA-C i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646420 32 + 64156825 -ggggaggccattcttctgtccaccacGCCACC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787447 32 + 59248254 -ggggaggccattcttctgtccaccacGCCACC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893479 32 + 51301725 -GGGGAGGCCATTCTTCTGTCCACCACGCCACC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601248 32 + 50890351 -ggggaggccattcttctgtccaccgcGCCACC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2656 33 + 138250 gggggaggccattcttctgtccaccacaCCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057214 106 - 122678785 I a score=999828.000000 s hg38.chr19_GL949753v2_alt 706300 308 + 796479 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCACAAAGCTTCTCCAAGAAAAATCAAGCCTGTTGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA s panTro4.chr19 59908346 298 + 63644993 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAA------------CCCACGGCTCAAGAGTCAAA------------GGTGCATCACAGCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTAAGGGAATGAAGTTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839244 308 + 60714840 CCATGATTCCATTTCCATGTCACCACTGTCTC-TAAGTGTGTCT--AACCCACGGCTCAAGAGTCAAA------------GGTGCATCACACCAGTGAGAACTCACAGGTTCGGGTTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTTTGGAACTGCAACATAACTAGCAATGGCTGCTGCAATCTCGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATTACATAGGAGTTAGCGGAATGAAGCTCCTGTGTGAGGCTTTGAGGAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103349744 309 - 106955855 CCACGATTCCATTTCCACGTCACCATTGTCTC-TAAGTGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCATCACACCACTGAGAACTCACAGGTTCGGGTTTTCTTTCTTCCTGTGGTTGATTTCTAGGCTATGGAACTGCGACATAACTAGCGATGGCTGCTGCGATCTTGCAAAGCTTCTCCAAGAAAAATCAAGCCTATCGTGTTTGGATCTGGGGCTGAATCACATAGGAGTTATCGGAGTGAAACTCCTGTGCGAGGCTTTGAGGAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646452 308 + 64156825 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC---AGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787479 310 + 59248254 CCATGATTCCATTTCCAGGTCACCATTGTCTCTTAAGCGTGTCTAAAACCCATGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCAGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAAATGTCTGTGGTGAGTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893511 309 + 51301725 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTCGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACGAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTATGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601280 309 + 50890351 CCATGATTCCATTTCCAGGTCACCATTGTCTC-TAAGCGTGTCTAAAACCCACGGCTC-AGAGTCGAA------------GGTGCCTCACACCAGTGAGAACTCACAGGTTTGGGCTTGCTTTCTTCCTGTGGTTGATTTCTAGGCTGTGGAACTGCGACATCACAAGCGATGGCTGCTGCAGTCTCGCAAAGCTCCTCCAAGAAAAATCAAGCCTGTCGTGTTTGGATCTTGGACTGAATCACATAGGAGTTACCGGAGTGAAGGTCCTGTGCGAGGCTTTGAGCAAACCACTGTGCAACTTGAGATGTCTGTGGTGAGTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2689 307 + 138250 CCATGATTCCA-TTCCATGTCACCATTGCCTC-TAAGAGCGTCCGAAGCCCATGGCTC-GGAGCTGAA------------GGTGCATCACACCAGCGAGAACTAACAGGTTTGGATTTTC-TTCTTTGTGTGGGTGATTTCTAGGCTGTGGAACTGTGACATAACTAGCAAAGGCTGCTGTCACCTCGCAAAGCTTCTCCACGAAAAATCAAGCCTAACGAACTTGGATCTGGGGCGGAATGACATAGGAGTTCCCGGAGTGCAGGGCCTATGTGAGGCTTTGAAGAAACCACTGTGTAACTTGAAACGTCTGTGGTGAGTCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20057320 313 - 122678785 CCATGATTTCATTTCCATGTC-CCATTGTCTG-AAAGCTTGTCTAAATCCTGCAGCTT-GAGGTCAACAACATTGGTTTTGGTGTATCTCCTCAGGGAAGACTCA-------GAGTTTACTTTCTTCATGTGATTGATTTCTAGGCTTTGGTATTGCAGCATAACCAGTGGTGGCTGCAATCATCTGTCAACACTTCTCCAGCAAAATTCAAACCTTACCCACTTGGATCTGGGGCTGAATCACATAGGGATTACTGGACTGAAGTTTCTGTGTGAGGCTTTGAAGAACCCAATGTGTAACCTCAAATGCCTATGGTAAGTTA i canFam3.chr1 I 106 I 3553 a score=363709.000000 s hg38.chr19_GL949753v2_alt 706608 158 + 796479 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCCAAGTTATATAATTGAGAGGACCTTTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTtctagtctat s panTro4.chr19 59908644 158 + 63644993 ACTTATAAGTTCAACTTCCTATACTTACACCTTACTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCCGACTTCCTAAGTTATATAATTGAGAGGACCTTTATAGAGTCAATCGAGCATTTACTAGGATGGTTAAAGGAATGAGTTCTAGTCTAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839552 158 + 60714840 ACTTATAAGTTCAACTTCCTATACTTATACCTTATTGAATCTGTGGCTAGTGTAAAATAATCAGTGAAGCTGACTTCCCAAGTTATATAATTGAGAGGACTTCTATAGAGTCGATCGAGCATTTACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350053 153 - 106955855 ACTTATAAGTTCAACTTCCTATGCTTATACCTTATCGAATCTGTGGCTAAT-----AGAATCAGTGAAGCCAACCTCCCAAGTTATATAATTGACAGGACTTGGATAGAGTCAATTGAGCATTCACTAGGATGGTTAAAGGAATAAGTTCTAGTCTAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646760 143 + 64156825 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTCGGATAGAGTCAACCGAGCTTTCACTAAGGTAGTTAAAGGAAT-AGTTCTAGTCTAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787789 143 + 59248254 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAACGTGAAGCAATCAGTGAAACCG--------------GCAATTGAGAGGACTCGGATAGAGCCAACCGAGCTTTCACTAAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893820 157 + 51301725 ACTTATAAGTTCAACTTCCTCTACTTAGACCTTATTGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACTGACTTCCCAAGTTATGTAATTGAGAGGACTTGGATAGAGTCAACCGagctttcactaagatagttaaAGGAAT-AGTTCTAGTCTAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601589 143 + 50890351 ACTTATAACTTCAACTTCCTCTACTTAGACCTTATCGAATCTGTGGCTAATGTAAAGCAATCAGTGAAACCG--------------GTAATTGAGAGGACTTGGATAGAGTCAACCGAGCTTTCACTGAGATAGTTAAAGGAAT-AGTTCTAGTCTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 2996 155 + 138250 CCTCATAAGTTCAACTTACTACGTTTACACCTTATTGAATCTGTGTCTAATGTAAAACAATCGGGGAAGGAGACTCCTC-GGTGAGATAATTGAGAGGACCTGAAT--GGTCAGTCGAGCATGCACTAGGATGGCTAGAGGAGTATGTTCTAGTCTGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I a score=20570.000000 s hg38.chr19_GL949753v2_alt 706766 24 + 796479 gtctaagttttt----gttttttttttt s panTro4.chr19 59908802 23 + 63644993 GTCTAAGttttt-----ttttttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839710 12 + 60714840 G----------------ttttttttatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350206 28 - 106955855 GTCTGAGttttttgtttgttgttttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646903 21 + 64156825 GTCTAAGTCTC-------tttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55787932 19 + 59248254 GTCTAAGtctc---------tttttttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47893977 24 + 51301725 GTctaagtctct----cttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601732 24 + 50890351 GTCTAAGtcttc----tttttttttttt i chlSab2.chr6 C 0 I 146 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C a score=281449.000000 s hg38.chr19_GL949753v2_alt 706790 188 + 796479 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcgcccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga s panTro4.chr19 59908825 188 + 63644993 ctt-----gaagttttgctcttgtcacataggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcttgcttcagcttcccgagtagctgggattacaggcacccgccaccatgcccagctaa-ttcttgta-tttttagtagagacagggtttcgccatgttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839722 186 + 60714840 ctt-----gaagctttgctcttgt--cataggctggagtgcaatggcgtgatcttggctcactgcaacctccgcctctcaggttcaagcagttctcttgcctcagcttcccaagtagttgggattacaggcgcccgccaccatgcccagctaa-tttttgta-tttttagtagagacagggtttcgccatgttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350234 193 - 106955855 cttgaggcgaagttttgctcttgtcacataggctggagggcaatggcgtgatcttggctcactgcaacatccgcctcccggattcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaa-tgtttgta-tttttagtagagacagggtttcgccatgttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60646924 189 + 64156825 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatcgcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccagctag-ttgttgtattttttagtagagacggggtttcaccaggttag i rheMac3.chr19 C 0 I 21 s macFas5.chr19 55787951 190 + 59248254 ttt-----gagacggagtctttgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccacctcgcccggctagttttttgtattttttagtagagacggggtttcaccaggttag i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47894001 190 + 51301725 ttt-----gagacagagtctttgtcgcccaggctggagtgcagtggccggatctcggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacgggcgcccgccacgttgcccagctagttttttacattttttagtagagacggggtttcaccaggttag i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=27932.000000 s hg38.chr19_GL949753v2_alt 706978 25 + 796479 aggttcatctcaaactcctgacctc s panTro4.chr19 59909013 25 + 63644993 aggttcatctcaaactcctgacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839908 25 + 60714840 aggttcatctcaaattcctgacctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350427 25 - 106955855 aggttcatctcaaactcctgacctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788143 25 + 59248254 aggatggtctcgatctcctgacctc i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47894193 25 + 51301725 aggatggtctcgatctcctgacctc i papAnu2.chr19 I 2 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=910.000000 s hg38.chr19_GL949753v2_alt 707003 1 + 796479 a s panTro4.chr19 59909038 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839933 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350452 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55788168 1 + 59248254 a i macFas5.chr19 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=18759.000000 s hg38.chr19_GL949753v2_alt 707004 33 + 796479 ggtgatccgcccatctcggcctcccaaagtgct s panTro4.chr19 59909039 33 + 63644993 ggtgatccgcccatctcggcctcccaaagtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56839934 33 + 60714840 ggtgatccacccatctcggcctcccaaagtgct i ponAbe2.chr19 C 0 I 153 s nomLeu3.chr10 103350453 33 - 106955855 ggtgatccgcccatctcggcctcccaaagtgct i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=13704.000000 s hg38.chr19_GL949753v2_alt 707037 56 + 796479 gggattacaggcgtgagccactgcgccaggccctatgtctaagttctagtctgtgt s panTro4.chr19 59909072 56 + 63644993 gggattacaggcgtgagccactgcgcccggccCCAGATGGAGGTTCTAGTCTGTGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103350486 56 - 106955855 gggattacaggcgtgagccactgcgcccggccCTATGTGTAAGTTCTAGTCTGTGT i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e calJac3.chr22_GL285922_random 3151 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5214.000000 s hg38.chr19_GL949753v2_alt 707093 11 + 796479 catgCAAAGAA s panTro4.chr19 59909128 11 + 63644993 TATGCAAAGAA i panTro4.chr19 C 0 M 393 s nomLeu3.chr10 103350542 11 - 106955855 CATGCAAAGAA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3151 11 + 138250 CATGCAAAGAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=7827.000000 s hg38.chr19_GL949753v2_alt 707104 51 + 796479 CACCTGTGAAATTTTAAGGATACAGTGCCTCAAGCCATTCAGCCAAAAGCC s nomLeu3.chr10 103350553 50 - 106955855 CACCTGTGAAATGTTAAGGATACAGTG-CTCAAGCCATTCAGCCCAAAGCC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3162 50 + 138250 CAGCCATGGCATTTTGAGGATACAAGGCCTCAAGCCATTCAGATGAAATC- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e ponAbe2.chr19 56839967 153 + 60714840 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=1146.000000 s hg38.chr19_GL949753v2_alt 707155 2 + 796479 AC s ponAbe2.chr19 56840120 2 + 60714840 AC i ponAbe2.chr19 I 153 C 0 s nomLeu3.chr10 103350603 2 - 106955855 AC i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 3212 2 + 138250 AC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I e panTro4.chr19 59909139 393 + 63644993 M a score=83351.000000 s hg38.chr19_GL949753v2_alt 707157 99 + 796479 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcatacctgtaatcccagcacttcgggaggccgaagcgggcggatcac s panTro4.chr19 59909532 99 + 63644993 TGCCCAGCACCCCACATTCAGAGAGGTGGGAATTGggccaggcacagtggctcacacctgtaatcccagcacttcgggaggccgaagtgggcggatcac i panTro4.chr19 M 393 C 0 s ponAbe2.chr19 56840122 99 + 60714840 TGCCCAGCACCCCACATTCAGAGAGGTAGGAATTAggccaggcatggtggctcacacctgtaatcccagcactttgggaggccgaagcgggcggatcac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350605 99 - 106955855 TGCCCAGCACCCCACAGTCAGAGAGGTAGGAATTGCgcccggcacggtggctcacacctgtaatcccagcactttgggaggccgaagtgggcggatcac i nomLeu3.chr10 C 0 M 100 s calJac3.chr22_GL285922_random 3214 98 + 138250 TG-CCAACACCCCACATTCAGAGAGGTAGGAATTGggccgggcgcggtggctcacacctgtaatcccagcactttgagaggccgaagcaggtggatcac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=172382.000000 s hg38.chr19_GL949753v2_alt 707256 444 + 796479 ttaaggtcaggagctcaagaccagcctggccaacttga---aactccatctctactaaaa-tataaaaattagccgagcatagtagtgggtgcctcttttttttttttttttttttttgagat--agtttcactcttgttgcccaggctgtagtgtaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacatagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctccggacct----------------------------------------caggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc s panTro4.chr19 59909631 447 + 63644993 ttaaggtcaggagctcaagaccagcctggccaacttgatgaaactccatctctactaaaaatataaaaattagccgagcgtagtagtgggtgcctctttttgttttttttttttttt-gagat--agtttcattcttgttgcccaggctgtagtgcaatggcgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgccttagcctcccacgtagctgcaaataaacaggcatgtgccaccatgcctggctaa--ttttgtatttttagtatagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------cgggtgagagccaccgtgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaggttgcagtgagctgagatcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840221 438 + 60714840 ttgaggtcaggagctcaagaccagcctggccaacttggtgaaactccatctctactaaaaatataaaaattagccgagtgtagtagtggatgcctctttttttttttttttttt----gagac--agtttcacccttgttgtccagactggagtgcaatggcacgatctcagctcactg------ccacctcctgggttcaagtgattctcctgccttaacctcccaagtagctggaaataaacaggcatgtgccaccacgcctggctaa--ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgacctcccgacct----------------------------------------caggtgagagccactgcgcccagccagtaggtgcctt------------------------------------taatcccagctacttgggaggctgaggcaggagaatcacttgaaccctggagatggaggttgcagtgacctgagatcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 3312 470 + 138250 ttgaggtcaggagttcaagattagcctggcagacatggtgaaaccccatctc----------------------------------------------------tttttttttt----gagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgaaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatt--acaggcacgcaccaccatgcccagccaattttttatatttttagtagagacggggtttcaccatgttgaccaggatggtctcgatctcttgaccttatgatccacctgcctcggcctcccaaaatgctgcaattacaggtgtgagccaccgcgcctggccttgtgaaaccccatctctactaaaaatccaaaatttagcctggcatggtaatcccagctgctcaggaggctgaggcagcagaatcccttaaacccaggaggtggaggttgcagtgagctgagatca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103350704 100 - 106955855 M e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=236145.000000 s hg38.chr19_GL949753v2_alt 707700 338 + 796479 tgtcactacactccatcctgggctacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGATATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATACCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTATCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcctggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacagcctggccaacacaatg-aagccctgtctcta s panTro4.chr19 59910078 330 + 63644993 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaaaaa------GAGGTAGGAATTAGA--------CAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAATCAGATGCACTTGAACCTGGAATCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCGGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggcaggtagattgcttgaggccaagaatttaaaaacaggctggccaacacaatg-aagccctgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840659 338 + 60714840 tgtcactacactccatcctgggcgacaagagcaagactccatctcaggaaaaaataaagaa------GAGGTAGGAATTACACATCATGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTAGCTACAGTCAAATGCACTTGAACCTGGACTCCTACCT-GGGAGGCAATCTTAAAAGAATTTGACTCCGGATgggcaaggtggctcatgcctgtaatcccggcattttgggagtccaaggtaggtagattgcttgaggccaggaatttaaaaacagcctggccaacacaatg-aaaccctgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103350804 343 - 106955855 tgtcactatactccatcctgggcgacaagagcaagactccatctcaggaaaaaaaaaaaaaaaaaAGGGGGTAGGAATTGGACATCGTGCCAGAAAATGCTGGCTCTATCAGCAGGTGAGTGGTCTCAACTTGGCTATCTTACAAATCCCTTGTGAGTTACCTACAGTCAAATGCACTCGAACCTGGAATCCTGCCCGGGGAGGGAATCTTAAAATAATTTGACTCCAgctgggcaaggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcac--gaggtcaggagatcgagaccagcctggccaacgtggtg-aaaccctgtctcta i nomLeu3.chr10 M 100 C 0 s calJac3.chr22_GL285922_random 3782 314 + 138250 catcgttgcactccatcctgggtgacaagagcgagactccctctcagaaaaaaa-------------GACGCAGGAATTGGACCTCATGCCAGAAAAT-------------GCAGGTGAATGGTCTCAAACCAGCTGTCGTACAGATCCCATGTGAGTTAGGTACAATCTAATGCACTTGAACCTGAAATCCTCCCT-GGAAGGGAATCTT-----AATTTGATTGCAGTTgggtgaagtggctcatgcctgtaatcccagcattttgggagtctaaggcgggcagactgcttgaggccaacaatttaaaaacagcctggccagtacaatgcaaactctgtctcta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=201823.000000 s hg38.chr19_GL949753v2_alt 708038 468 + 796479 ctgaaagtacaaaaatccgctgagcatggctgtgtac--ctctgctcccagttactcaggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagcgaattgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaaaacaaaaaaaacaaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgagaccgtgtttcaaa----aaataaaGTggcagggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct s panTro4.chr19 59910408 457 + 63644993 ctgaaagtgcaaaaatccgctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgagctgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaaaaaaaaaaa-----------caaaggcgcctttttaatcactcactgacacgtgtagaggagcaaaaagtttgagttgcTGGTTGgcccaggaggtcaaggctgcagtgagccaagatggcgttaccacactccagcctgggcaaccgagtgggaccgtgtttcaaa----aaataaaGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggccgaggcaggtggatcacctaaggtcaggagttcgtagaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56840997 446 + 60714840 ctaaaagtacaaaaatcagctgagcgtggctgtgtac--ctctgctcccagttactcgggaggctgaggtgggaggatcacttgagcctgggaggaagaagttacagtgaactgagatcacgtcacctcactccagcctgggtgac--agtgagatcctgtctcaaaaa---------------------aaaGGCGCCTTTTTAATCACTCACTGACACATGTAGAGGAGCAAAAAGTTTGAGTTGCTGGTTGgcccaggaggtcaaggctgcagtgagccaagctggtgttaccacactccagcctgggcaactgagtgagaccatgtttcaaa----aaaTTAAGTggccgggtgcagtggctcatgcctgtaattccagcactttgggaggctgaggcaggtggatcacctaaggtaaggagtttg-agaccagcctgtctctactaaagagaca-ggtgaaaccctgtctct i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 4096 432 + 138250 ctaaaagtacaaaaattagctgggcatggctgtgcacgtctgtgctctcagctactcaggaggctgaagtgggagaatcacttgagcctgggaggaagaagttacagtgaactgaga----------gcactccagcctggatgacagagtgagatcctgtctcaaaaaaaaaaaaaaaaa---------aaaGGCACCTTTTTAATCACTCACTGACACGGGCAGAGGGGCAAAAAGTTTGAGTT---------------aggtcgaggctgcagtgagccaagatggtgccaccacactccagcctgggcaacagagtgagaccttgtctcaaaagagaaaagaaGTggctgggcacggtggctaacactagtaatcccagcactttgggagactgaggcgggtggatcaactgagatcaggagttcg-agaccagcctggcc----------aacatggtgaaaccacgtctct i calJac3.chr22_GL285922_random C 0 I 1 e canFam3.chr1 20057633 3553 - 122678785 I e nomLeu3.chr10 103351147 0 - 106955855 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=141056.000000 s hg38.chr19_GL949753v2_alt 708506 191 + 796479 ctaaaaccacaaaaatcaggcaggcatggtggcacatagctataatctcatctacttg-------gaggcacgagaactgcttgaatccaggaggcagaggctacagtgagccgagatcatgccacagcactccagccctggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc s panTro4.chr19 59910865 191 + 63644993 ctaaaaccacaaaaatcaggcgggcatggtggcacatagctataatctcatctactcg-------gaggcacgagaactgcttgaatccgggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgagagagcaagact--gtctcaa---agaataaCTTCAAAGATGGaagt-------tatttaacctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841443 189 + 60714840 ataaaaccacaaaaattaggcgggcatggtggcacatagctataatctcatctacttg-------gaggcacaagaactgcttgaatccaggaggcagaggttacagtgagccgagatcatgccacagcactccagccttggcgatagagcgagact--gtctcaa---agaataaCTTCAAAGATGGAAGT-------TATTTAAc--c i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351147 191 - 106955855 ctaaaaccacaaaaattagccgggcgtggtggcacatagctataatctcatctattgg-------gaggcacgagaactgcgtgaattcaggaggcagaggttacagtgagctgagatcatgccacagcactccagccttggcaatagagcgagact--gtctcta---agaataactttaaagacggaagt-------tatttaacctc i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4529 210 + 138250 ttaaaaacacaaaaattagccaggcatggtggcacatagccataatctcgtctatttgggagactgaggcacgagaattgcttgaatctgggaggccgaggttgcagtgacccaggatcaccccatagcactcaagcctcgatgacagagcgagactccatctcaaaaGagagtaacttataagatggaagttacttaatacttaaccgc i calJac3.chr22_GL285922_random I 1 C 0 e canFam3.chr1 20057633 3553 - 122678785 I e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=337210.000000 s hg38.chr19_GL949753v2_alt 708697 371 + 796479 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacgatggcttcagggtcttctgtgagctggccactgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgactcggtctcttcacccc-------------ctCACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCAGAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA s panTro4.chr19 59911056 371 + 63644993 tctgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcttcagggtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctgtctca--ctcatgcccgctgcctggatgttctattttacgtgtcagtcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaactcccccccgag----ctctatgacttggtctcttcacccc-------------cttACCT-----CCAACCATTGTAGCCAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCGCCTCCATAT-TTTCCTGTTAGCAGATGAGCCCTGAGGGCGGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56841632 369 + 60714840 tccgctcaaaagcctcagtgcttccctatgtcaatccaggtaaaatcctatattgacaatggcctcagggtcttctgtgagctggccaccgcttacctatgacctcatgt-tgacaatcctccctggctca--ctcatgcccgctgcctggatgttctatttcacatgtcaatcacatgtatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccccGAG----CTCTATGACTCAGTCTCTTCACCCC-------------CTCACCT-----CCAACCATTGTAGCCAGAA-CCCTCAGTTATTCCCTG--TACCCCTTGCCCTTCATAACCCCT-------------CATCACCTCCATAT-TTTCCTGTTAGCAGATGAG-CCTGAGAGCAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351338 370 - 106955855 tctgctcaaaagcctcagtgcttccctatgtcaatctaggtaaaatcctatattgacgacggcctcgccgtcttctgtgagctggccaccgcttacctatgacctcatct-tgacaatcctccctggctca--ctcctgcccgctgcctggatgttctattttacgtgtcaatcacatgcatcttcagggcctctgcacaagctatttctctgcctggagaact-ccccctgag----ctctatgacttggtcccttcacccc-------------ATCACCT-----CCAACCACTGTAGCTAGAA-CCCCCAGTTATTCCCTG--TACCCCTTGTCCTTCATAACCCCT-------------CATCACCtccatat-tttcctattagcagatgagccctgagggcggaga i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 4739 349 + 138250 tctgctcaaaaccttcagctcttccctaggtcaatccaaataaaattctgtgtttacggtggcctcagggt---------------cacctcttacctgtgtcctcatct-ctacagtcctccctggctcactctcatgccggctgcctggatgttctgttctacatgtcaatcacatgcaaccccagggcctttgcacaagctctttctctgcctggagaacc----cccaaa----ctctgtgacccagtctctttaccct-------------gtcatct-----ccaacCATT-TAGCTGGAA-CTCCCAGTTACTCCCTGTATACACCTCGACCTT---AACCCCT-------------TGGACACTCCATAT-TTTCCTGTT---AGATGAGTCTTGAGGGCAGAGT i calJac3.chr22_GL285922_random C 0 I 8 s canFam3.chr1 20061186 401 - 122678785 tctggtcaaaatctccagtggttccccatctcgtcccaagtaaaatctgaagtttacaatggcctaagggccttttgtgaaatggctccctcttatctgtgacctcatctcttacaaccctccctggttcactctcaagctggctgtcttgatat--tgttttacatgataatcctccatgacctcaggacctttgcataagctatttctctgcctgaggaactcctactccagatctctctatggttcattctcttcacccctgaggtcttcatattgacctataggtcaactattgtagtgagcatcccccaatt----------ctccttttgcctttcatgacccttattggatatggcacaccacatatatctgtttcctattagcacatgagctcagagggaagaga i canFam3.chr1 I 3553 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e macFas5.chr19 55788169 0 + 59248254 C e rheMac3.chr19 60647113 21 + 64156825 I a score=1314.000000 s hg38.chr19_GL949753v2_alt 709068 1 + 796479 C s panTro4.chr19 59911427 1 + 63644993 C i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842001 1 + 60714840 C i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351708 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536801 1 - 59248254 c i macFas5.chr19 I 67842 C 0 s calJac3.chr22_GL285922_random 5096 1 + 138250 T i calJac3.chr22_GL285922_random I 8 C 0 s canFam3.chr1 20061587 1 - 122678785 c i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=5407.000000 s hg38.chr19_GL949753v2_alt 709069 11 + 796479 Gtt----------ttgtttgt s panTro4.chr19 59911428 11 + 63644993 Gtt----------ttgtttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842002 11 + 60714840 Gtt----------ttgttggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351709 21 - 106955855 tttgttgttgttgttgttgtt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536802 11 - 59248254 gtt----------ttatgtat i macFas5.chr19 C 0 I 3 s calJac3.chr22_GL285922_random 5097 11 + 138250 GTT----------TTGTTTTT i calJac3.chr22_GL285922_random C 0 I 57 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e papAnu2.chr19 47894218 0 + 51301725 C e rheMac3.chr19 60647113 21 + 64156825 I a score=129168.000000 s hg38.chr19_GL949753v2_alt 709080 93 + 796479 ttttt--gagaccggagtctcactct-gtcacccaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga s panTro4.chr19 59911439 94 + 63644993 ttttt-tgagaccggagtctcactct-gtcacccaggctggagtgcaatggcgccatctcggctcactgcaacctccgcctcctgggttcaagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842013 93 + 60714840 ttttt--gagactggagtcccactct-gtcacccagactggagtgcagtggcgcgatctcggctcactgcaacctccgcctcctgggttcaagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351730 94 - 106955855 tttttttgagact-gagtctcactct-gtcacccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536816 92 - 59248254 tttat--gaga-tggagtttcactct-gttgcccaggctggagtgcagtggcatgatcttcactcactgcaacctctgcctcccaggctccagtga i macFas5.chr19 I 3 C 0 s papAnu2.chr19 3474716 92 - 51301725 tttat--gaga-tggagtttcactct-gttgcccagcctggagtgcagtggcacgatcttcgctcactgcaatctctgcctcccaggctccagtga i papAnu2.chr19 I 6558 C 0 s calJac3.chr22_GL285922_random 5165 93 + 138250 ttttt--gaga-cagagtttccttccggttgcccaggctggagtgcaatgacacaatcactgctcactgcaaactccagctcccgggttcaagcga i calJac3.chr22_GL285922_random I 57 C 0 e canFam3.chr1 20061588 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=16475.000000 s hg38.chr19_GL949753v2_alt 709173 12 + 796479 ttctcctgcccc s panTro4.chr19 59911533 12 + 63644993 ttgtcctgcccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842106 12 + 60714840 ttctcctgcccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351824 9 - 106955855 tt---ctgcctc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536908 12 - 59248254 ttcttgtgcctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474808 12 - 51301725 ttcttgtgcctc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5258 12 + 138250 ttctcctgcttc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061588 12 - 122678785 ttctcttgttcc i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=93418.000000 s hg38.chr19_GL949753v2_alt 709185 108 + 796479 agcctcctgagtagctgggattacaggtgcctgtcaccacgcccagctaacttctgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt s panTro4.chr19 59911545 108 + 63644993 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccagctaacttttgtatatttagtagagacacggttttaccatgtta----ggttggtcttgaactcctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842118 107 + 60714840 agcctcctgagtagctgggactacaggtgcctgtcaccatgcccggctaacttttgtatttttagtagagacagggttttaccatgtta----ggctggtcttgaactcc-t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351833 107 - 106955855 agccttccgagtagctgggattacaggtgcccgccaccacgcccagctaacttttgtacttttagtagagacagggttttaaggtgtta----ggctggtcttgaactcc-t i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3536920 103 - 59248254 accttcccaagtagctggcattaaaggcactcaccaccatgtgtggctaatt--------ttttgtagagacggggtttcaccatgttggcctggctggtctcaaactcc-t i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474820 103 - 51301725 accttcccaagtagctggcattaaaggcactcaccaccatgcgtggctaatt--------ttttgtagagatggggtttcaccatgttggcctggctggtctcaaactcc-t i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 5270 42 + 138250 agcctcccaaatagctgggactgtaggcacacaccaccacgc---------------------------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C e chlSab2.chr6 47601756 146 + 50890351 I e rheMac3.chr19 60647113 21 + 64156825 I a score=10904.000000 s hg38.chr19_GL949753v2_alt 709293 8 + 796479 gacctcag s panTro4.chr19 59911653 8 + 63644993 gacctcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842225 8 + 60714840 gacctcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351940 8 - 106955855 gacctcag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647134 7 + 64156825 gacctca- i rheMac3.chr19 I 21 C 0 s macFas5.chr19 3537023 8 - 59248254 gaactcag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 3474923 8 - 51301725 gaactcag i papAnu2.chr19 C 0 n 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e chlSab2.chr6 47601756 146 + 50890351 I a score=1314.000000 s hg38.chr19_GL949753v2_alt 709301 1 + 796479 g s panTro4.chr19 59911661 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842233 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351948 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 3537031 1 - 59248254 g i macFas5.chr19 C 0 n 0 s papAnu2.chr19 47894218 1 + 51301725 g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601902 1 + 50890351 g i chlSab2.chr6 I 146 C 0 e canFam3.chr1 20061600 0 - 122678785 C e calJac3.chr22_GL285922_random 5312 0 + 138250 C e rheMac3.chr19 60647141 0 + 64156825 C a score=189574.000000 s hg38.chr19_GL949753v2_alt 709302 71 + 796479 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccaccgtgcccggccTGAGACTT s panTro4.chr19 59911662 71 + 63644993 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccagcgtgccctgccTGAGACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842234 71 + 60714840 tgatccatccacctcggcctcccaaagtgctgggattacaggcgtgaaccactgtgcccggccTGAGACTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103351949 71 - 106955855 tgatccatccaccttggcctcccaaagtgctgggattacaggcgtgagcccccgcgcccagcctgagactt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647141 71 + 64156825 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788169 71 + 59248254 tgatccgcccacctgggcctccaaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894219 71 + 51301725 tgatccgcccacctgggcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcctaagactT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601903 71 + 50890351 tgatccacccgtcttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTGAGACTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5312 51 + 138250 ------------------ctcccaaagtgctgaga-cacaggcctgagccactgcgcccggcc-GAGACTT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20061600 0 - 122678785 C a score=1168560.000000 s hg38.chr19_GL949753v2_alt 709373 362 + 796479 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTGCCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT s panTro4.chr19 59911733 362 + 63644993 C---TGTTGGTCATGCAGATCCCCAACACACGAGGGTGGGCTTGGCTTACCGGAGGGCATCGATCAGCACTGGCTGCATTAACGTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACATGTTCCAGTGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGGGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842305 361 + 60714840 C---TGTTGGTCATGCAGATCCCCAACACCCGAGGGTGGGCTTGGCTTACAGGAGGGCATCGATCAGCACTGGCTGCATTAACATGTTGATTTCTGTGTTT-CCC---AGGTTGTGGGGATGTTCCATCCCTCTGTTCAGTTGTGAAGACCTCTGTTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGTTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACATCCCAATGGCACCCTCCGGACACTCAGGTATGATCCATTTACTTCCCCATCAGGCTTTCTCCAGAGTGGTAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGAAGA------CT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352020 355 - 106955855 c---tgttggtcatacagatccccaacacccgagggggggcttggcttataggagggcatcgatcagcaccggccgaattaacgTGTTGATTTCTGTGTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTGAAACCTTGACACGTCCCAATGGCACCCTTCAGACACTCAGGT-------GTTTACTTCCCCATCAGGCTTTCTCCAGAGTGGCAGGTTT--AGGGGAAGCATAATGACATGGACCTGCTGTAGGAGA------CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647212 359 + 64156825 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGGTGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788240 359 + 59248254 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCATTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894290 365 + 51301725 G---TGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCAGCACCAGCTGAATCAACGTGCTCAGTTCTGTGTTTCCTC---AGGTTGTGGGGATGTTCCATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTCAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCCATTTACTTCCCCGTCAGGCTTCCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGACTGATCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47601974 362 + 50890351 GTGTTGTTGGTCATGCAGGTCCCCAAGCCCCGAGGCTGTGCTTGGCTTATGGGAGGGCATCGATCGGCACCAGCTGAATCAGCGTGCTCATTTCTGTGTTTCCTC---AGGCTGTGGGGATGTTCTATCCCTCCCTTCAGTTGTGAAGACCTCTGCTCTGCCCTCAGCTGCAACCAGAGCCTCATCACTCTGGACCTGGGCCAGAATCCCTTGGGGTCTAGTGGAGTGAAGATGCTGTTTAAAACCTTGACACGTCC---TGGCACCCTCCAGACACTCCGGTATGATCTATTTACTTCCCCATCAGGCTTTCTCCGGGGTGGTAGGTTT--AGGGGAAACATAATGACGTGGACCTGCTGTAGGAGA------CT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5363 361 + 138250 C---TGTTGCTCATGCAGATCCCCAACACCCAAGGGTGCACCTGACTCACAGGAGGGTGCCGGTCAGCACTGGCTGAACAAACGTGTTGATTTCTGCCTTTCCCC---AGGTTGTGGGGATGTTCCATCCCTCCGGCCAGCTGTGAGAACCTCTGCTGTGTCCTCAGCTGCAACCAGACCCTCATCACTCTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAGTAAAGTTGCTGTTTGAAACCTTGACACGTCCAAATGGCACCCTCCAGACACTCAGGTACGATCCACGTACTCCCCC-TCAGGTATTCTCCGGGGTAGTAGGTTT--AGGGGAAGCATAATCACAGGAATCTGCCGTAGGAGA------CT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20061600 353 - 122678785 c---tgttg--------gatacccaacacccaggcgtatgtctggcatataggatggtatcagtaaacattggttgaatga-----CCTAATTTTGTGTCTCCCCTATAGGTTGTGGGGATGTGCCATCACTCCTTTCAGCTCTGAAATCCTCTCATCTGCCCTTGGCAGAAATCAGAGCCTGGTCACACTGGACCTGGGCCAGAATTCCTTGGGGTATAGTGGAATAAAGATGCTGTGTGATACCTTGAAACTTCACTGTTCCTCCCTCCGGACACTCAGGTATGATCCTCCTGCTGTTCAGT-GTTTTTCCTCCATGATGGTAGGTTTGCAAGGGGAGCACAAACCACAGGAATTGTTGTAGGCAA------CT i canFam3.chr1 C 0 I 757 a score=18278.000000 s hg38.chr19_GL949753v2_alt 709735 6 + 796479 GATCTG s panTro4.chr19 59912095 6 + 63644993 GATCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842666 6 + 60714840 GATCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352375 6 - 106955855 GATCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647571 6 + 64156825 GATCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788599 6 + 59248254 GATCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894655 6 + 51301725 GATccg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602336 6 + 50890351 GATCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 5724 6 + 138250 GATCCG i calJac3.chr22_GL285922_random C 0 I 456 e canFam3.chr1 20061953 757 - 122678785 I a score=1822264.000000 s hg38.chr19_GL949753v2_alt 709741 733 + 796479 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaaccgcacccggccACC-tttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaa---tcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCACGGCTGC-CGTCTACCTGCTCATGATAGCCATTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTGGGGTTTTGTTTTGtttt--------ttctttctttttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-cgtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc s panTro4.chr19 59912101 705 + 63644993 gtagctgg-attacaggttcccgccatcacacccagccaatttctgtatttcacttggagaaacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagcaactgcacccggccACCttttttttttttttt--------cctttgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggcttgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaggtaggtttataagcatgaaccattgcacccagcCATGGCTGC-TGTCTACCTGCTCATGACAGCCAGTTGTCACTGGGCTGT-------------------------GTTTTGGGGTTTTGttttgtttt--------ttc-------ttttttttttttttctgagatggagtctcactctgttgcccaggctggggtgcagtggt-------------tgctaactgcaacctccacctcccaggttccagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtggtctcaaactcctgacctc-ggtgatttgcccacctcagcatcccaaagtgctgggattacaggcatgag--ccaccgcaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56842672 740 + 60714840 gtagctgg-attacaggttcccgccaccagacccagccaatttctgtatttta---gtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcagatgatcca-ctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccACCttttttttttttttttttttttacctttgaggcaagaactcactgtat-tccccaggct-gagtccagcagtacaatgatggctcgctgcaggctcgctccagctcctgggctcaagcaatcctcctgcctcagttcctgagtaactaggtttataagcatgaaccattgcacccagccaCGGCTGC-TGTCTGCCTGCTCATGAGAGCAAGTTGTCACTGGGCTGTGTTTTGTTTGTTGCATTTTGTCAGGGTTTTTGGGGTTCGTttttttgt--------ttt--ttgttttttgttttgttttctgagatggagtctcactctgttgcccaggctggagtgcagtggt-------------tgctaactgcaacttccacctcccaggttcaagctattctcatgcctcagcctcccaagtagctgggattacaggcatgcaccaccacacctaggtaatttttgtatttttagtagagacagggttttgccatgttggccagggtgatctcgaacttttgacctc-ggtgatttgcccacctcagcgtcccaaagtgctgggattacaggcatgagccccaccgcaccc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103352381 730 - 106955855 gtagctgg-attacaggttcccgccaccacacccagccaatttctgtatttt--tagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccgcctgcctcagcctcccaaagtgctgggattacaggcatgagctaccgtacccagcc-----------Ctttatt--------tcttcgaggcaagaactcactatgt-tccccaggctggagtccagcagcacaatgatggctcgctgcaggctagctccagctcctgggctcaagcaatccttctgcctccgttcctgagta-ctaggtttataagcatgagccattgca-ccAGCCACGGCTGC-TGTGTACCTGCTCATGAGAGCCAGTTGTCACTGGGCTGCgttttgtttgttgcattttatcagggttttggggttttgttttgttttgcttttcctttttttttttttttttttttttcctgagatggagtctcactctgttgcccaggctgggttgcaatggt-------------tgctaactgcaacctccacctcccaggttcaagctattctcatgcttcagcctcccaagtagctgggattacaggcatgcaccaccacacccagctaatttttgtatttttagtagagacagggttttgccatgttggccagggtgctctcgaactcttgagctt-ggtgatttgcccacctcagcgtcccaaagtgctgggattataggcatgag--tcactgcaccc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60647577 710 + 64156825 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagttcctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55788605 710 + 59248254 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------Ctttttttt--------ccttggaggcaagaactcactctgt-tccccaggctggagtccagcagcacagtgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagtttctgagtagccaggtttgtaagcatgaaccattgcacccagccaTGGCTGCTTGTCTGCCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGTTGGGTTTTGTTGGGGTTTTGG-gttttgttttgtttt----------------------gttttgttttCtgagatggagtctcgctctgttgcccaggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcaaactcctgacctt-ggtggttcacccacctcagcatcccaaaatgctaggattacaggcatgag--ccaccgcaccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47894661 702 + 51301725 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagatgggctttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgcacccagcc---------c-ttttttt--------ccTTGGAGGCAAGaactcactctgt-tccccaggctggagtccagcagCACAGTGATGGCTC-----------ACcccagttcctgggctcaagcaatcctcctacctcagttccTGAGTAGCCAGGTTTGTAAAcatgaaccattgcacccagccatgGCTGCTTGTCTACCTGCTCGCGAGAGCCAgttgtcattggattgtgttttgtttgttgggttttgttggggttttgg-----------gtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccaggctggggtatggTGGTGTAGTAgtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtcttgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcatgag--ccaccgcaccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47602342 705 + 50890351 gtagctggaattacaggttcccgccaccacacccagctaa-ttctgtatttt--tagtagagacgggctttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgcctcggtctcccaaagtgctgggattacaggcgtgaaccgctgtacccagcc---------Ctttttttt--------ccttggaggcaagaactcactgtgt-tccccaggctggagtccagcagaacaatgatggctc-----------actccagttcctgggctcaagcaatcctcctacctcagctcctgagtagctaggcttgtaagcatgagccattggacccagccaTGGCTGCTTGTCTACCTGCTCACGAGAGCCAGTTGTCATTGGATTGTGTTTTGTTTGCTGGGTTTTGTTGGGGTTTTGG------Gttttgtttt----------------------gttttgttttctgagatggagtctcgctctgttgcccgggctggggtatagtggt---gtagtatctcagctaactgcaacctccgcctcccaggttcaggctattctcatgcctcagcctcccatgtagctgggattacaggcatacaccaccacacatagctaatttttgtatctttagtagagaca-ggttttgccgtgttggccagggtggtctcgaactcctgacctt-ggtggttcacccacctcagcatcccaaagtgctaggattacaggcgtgag--ccactgcaccc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6186 686 + 138250 gtagctgggattacaggtggctgccaccacgcctggctgatttctgtatttt--tagtagagacagggttttaacatgttggctaggctgatctcgaactcctgacctcaggtgatctacctgtttcagcctcccaaagtgctgggattataggtgttagccaccatgaccagcc---------Cttttttgt--------tttttgaggcaagaactcactatgtccccccaggctggagtcgagcagcacgacgacagttcgctgcaggctcaccccacctcctgggctcaagccgtcctcctgcctcactcccggagtagctaggtttac---catgagccatggcacccagccaTGGCTGC-TGTCTATCTGCTCATGAGAGCCAGTTGTCACTGGGTTGTGTTTT-TTTGTTTGATTTTTTTGGTGGGGTGGGGA--------GGCtt----------------------------------gagaaggagcgttgctctgttgcccaggctggagtgcagtggt---gtgat-----atctaactgcaacccctgcctcccagg---------ttctcgtgcctcagccccccaagtaggtgggattacaggcataagccatcaaatccagctaatttttgtatttttagtagagacggggttttgccatgttggccagcctggtcttcaaatgctgacctcaggtaatccacctgccttggcctgccaaagtgctgggattacaggcatcag--ccaccacacc- i calJac3.chr22_GL285922_random I 456 C 0 e canFam3.chr1 20061953 757 - 122678785 I a score=40910.000000 s hg38.chr19_GL949753v2_alt 710474 15 + 796479 ggccTGAGTTGTATT- s panTro4.chr19 59912806 15 + 63644993 ggccTGAGTTGTATT- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843412 15 + 60714840 ggccTGAGTTGTATT- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353111 15 - 106955855 ggcctgagttgtatt- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648287 15 + 64156825 agccTGAGTTGTATT- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789315 15 + 59248254 agccTGAGTTGTATT- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895363 15 + 51301725 agcctgagttGTATT- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603047 15 + 50890351 agccTGAGCTGTATT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 6872 9 + 138250 ------AGCtatatt- i calJac3.chr22_GL285922_random C 0 I 893 s canFam3.chr1 20062710 16 - 122678785 GACCTGTGTTGTCTAC i canFam3.chr1 I 757 C 0 a score=481332.000000 s hg38.chr19_GL949753v2_alt 710489 218 + 796479 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAATGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----gtttgtt--t s panTro4.chr19 59912821 218 + 63644993 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAAACTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtttgtt--t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843427 218 + 60714840 TTGATACCATGGCATCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT-------------------------------CAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTATTTAACATGAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATAGACACTAAGGTTTTTTTTAAGCTTTAA-----Gtttatc--t i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353126 212 - 106955855 TCGATACCATGGCGTCAAAGAACCAAGAAGCCCCTTCCTAGGAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATACTCTACTGCTGGCTCAAAATAATCTTTATGTAGAAGAAAC--AGATTACTTGTTTATTTAACACAAATCTCAGCCTAAGATACTTTGTAAGTCAAAAGACATATGGACACTAAGGGTTTTTTTAAGCTTTAA-----Gtt------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60648302 213 + 64156825 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTATGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGATGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttattt-- i rheMac3.chr19 C 0 I 10 s macFas5.chr19 55789330 212 + 59248254 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895378 212 + 51301725 TCAATACCATGGC----AAGAACCAAG-AGCCCCTTCCTAGAAGTGTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATATAGTCTACTGCTGgcttaaaataatctttatgtaGAAGAAACATAGATTACTTATTTACTTAACATGAAACTGAGCTTAAGATACTTTGCAAGTCAAAAGACATATGGACGTTAAGGG-CTTTTTCagctttga-----gtttatt--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603062 217 + 50890351 TCAATACCATGGCGTCAAAGAACCAAG-ATCCCCTTCCTAGAAGTTTGGGAACTT------------------------------CCAGAAATTCTCACAAGCAATACAATCTACTGCTGGCTTAAAATAATCTTTATGTAGAAGAAACATAGATTACTTGTTTACTTAACACGAATCTCAGCCTAAGATACTTTGCAAGTCAAAAGACATCTGGACGTTAAGGG-CTTTTTAAGCTTTGA-----Gtttatt-t- i chlSab2.chr6 C 0 I 10 s canFam3.chr1 20062726 218 - 122678785 TTGCTACCATGGCAACAAAGAACAGTA-CAACTTTTCTTGGTCTTACCCAAGCTTGTTTAAATACTCAGATGCAAAAACAAACAAAAAGAAATACTCAGATGCAATGTAGACAACCAATGGCTTGAAATGATAATTATGTAGAAGGAAC--AGATTATATATGTACTCAAC---------------AGGTAGCTTGCTAGTCAAAAG-------------AAGGG-ATTTATAGACTCTGACATTTGTTT------ i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 6881 893 + 138250 I a score=3689.000000 s hg38.chr19_GL949753v2_alt 710707 9 + 796479 gtttgttta s panTro4.chr19 59913039 9 + 63644993 gtttgttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843645 9 + 60714840 atctattta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353338 4 - 106955855 -----ttta i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20062944 9 - 122678785 CTGTGTTTA i canFam3.chr1 C 0 I 1205 e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895590 0 + 51301725 C e macFas5.chr19 55789542 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I a score=5543.000000 s hg38.chr19_GL949753v2_alt 710716 20 + 796479 ttta-----ttatttatttTGGAGA s panTro4.chr19 59913048 25 + 63644993 tttatttatttatttattttggaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843654 20 + 60714840 ttta----tttattta-tttggaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103353342 20 - 106955855 ttta----tttatgtt-tttggaga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55789542 9 + 59248254 ----------------ttttggaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895590 9 + 51301725 ----------------ttttggaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=637.000000 s hg38.chr19_GL949753v2_alt 710736 13 + 796479 C--AGTTTTACTCTT s nomLeu3.chr10 103353362 15 - 106955855 cagagttttgctctt i nomLeu3.chr10 C 0 I 1521 e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=0.000000 s hg38.chr19_GL949753v2_alt 710749 580 + 796479 TTTTTTGGGGTGCATCttttttcttttttttttttttttttcctttttttttttttttttttttattgatcattcttgggtgtttctcacagagggggatttggcagggtcataggacaatagtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcggccttccgcagcgtttgtgtccctgggtacttgagattagggagtggtgatgactcttaacgagcgtgctgccttcaggatctgtttaacaaagcatatcttgcaccgcccttaatccgtttaactctgagtggacacagcacatgtttcagagagcacggggttgggggtaaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaaatggggggctgacccccccacctccctcccggacagggcggctggccggttagaggggctcctcacttcccattaggggcggccgggcagaggcgcccctcacctcccggacagggcggctggctgggcggggggctgacccccccacctccccGCCCGGC e canFam3.chr1 20062953 1205 - 122678785 I e ponAbe2.chr19 56843674 0 + 60714840 C e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e papAnu2.chr19 47895599 0 + 51301725 C e macFas5.chr19 55789551 0 + 59248254 C e rheMac3.chr19 60648515 10 + 64156825 I e panTro4.chr19 59913073 0 + 63644993 C a score=1187.000000 s hg38.chr19_GL949753v2_alt 711329 2 + 796479 ca s panTro4.chr19 59913073 2 + 63644993 ca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843674 2 + 60714840 ca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55789551 2 + 59248254 cg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895599 2 + 51301725 cg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47603279 10 + 50890351 I e rheMac3.chr19 60648515 10 + 64156825 I a score=484265.000000 s hg38.chr19_GL949753v2_alt 711331 276 + 796479 gagttttactcttgttgtccagcctggagcgcaatggcgctatctcggcttactgcaacctccgcctcccgggttcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttaatagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacaggcgtgagccaccatgcctggcc s panTro4.chr19 59913075 275 + 63644993 gagttttactcttgttgcccagcctgg-gcgcaatggcgctatctcggctcactgcaacctccgcctcccgggttcaagaggttcttctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaatcttgtatttttagtagagaca--gggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctaagattacagccatgagccgccatgcctggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843676 278 + 60714840 gagttttactcttgttgcccagcctggagtgcaatggcgctatctcggctcactgcaacctctgcctcccggattcaagaggttctcctccctcagcctcccaagtagctgggactacaggcatgtgccaccacacctggctaattctgtatttttagtagagacacggggtttctccatattggtcaggctggtctcgaactcctgacttcaggtgacctgcctgcctcagcctcccaaa-gtgctaagattacaggcatgagccaccacgcctggcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648525 275 + 64156825 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccatgtagctgggattacaggcatctg-taccacgtctggctcattttgtatctgtagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggcttacaggcgtgagccaccgcgcctggcc i rheMac3.chr19 I 10 C 0 s macFas5.chr19 55789553 275 + 59248254 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggattacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgacttcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccgcgcctggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895601 275 + 51301725 gagttttgctcttgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggactacaggcatgtg-taccacgtctggctcattttgtatttttagtagagacg--gggttgctccctgttggtcaggctggtctcgaactcccgactgcaggtgacccgcctgcctcagcctcccaaa-gtgctgggattacaggcgtgagccaccacgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603289 276 + 50890351 gagttttgctcctgttgcccagcctggagtgcaatggtgctatctcagctcactgcaacctccgcctcccgggttcaagcagttctcctccctcagcctcccaagtagctgggatcacacgcatgtg-taccatgtctggctcattttgtatttttagtagagaca--gggttgctccatgttggtcaggctggtcttgaactcctgacttcaggtgacccgcctgcctcggcctcccaaaggtgctgggattacaggcatgagccaccgtgcctggcc i chlSab2.chr6 I 10 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e calJac3.chr22_GL285922_random 6881 893 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=57447.000000 s hg38.chr19_GL949753v2_alt 711607 25 + 796479 TGCATCTCCTCTGTTTAAC-TGGTAC s panTro4.chr19 59913350 25 + 63644993 TGCATCTCCTCTGTTTAAC-TGGTAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843954 25 + 60714840 TGCATCTCCTCTGTTTAAC-TGGTAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648800 26 + 64156825 TGCATCTCCTCTGTTTAACCTGGTAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789828 26 + 59248254 TGCATCTCCTCTGTTTAACCTGGTAC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895876 26 + 51301725 tgcatcTCCTCTGTTTAACCTGGTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603565 26 + 50890351 TGCATCTCCTCTGTTTAACTTGGTAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7774 25 + 138250 TGCATCTCCTCTGTTGAAC-TGGTAC i calJac3.chr22_GL285922_random I 893 C 0 e canFam3.chr1 20062953 1205 - 122678785 I e nomLeu3.chr10 103353377 1521 - 106955855 I a score=427888.000000 s hg38.chr19_GL949753v2_alt 711632 183 + 796479 TCCGGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAAGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTGCACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC s panTro4.chr19 59913375 183 + 63644993 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCGGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTACTCAGCAATTCCAT-TTTCTGTGTATGATAATCAACAAGCATCTCAAACTACACAATGGCTATATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56843979 183 + 60714840 TCCGGGGTCCACCGAGTAGAAGTTGCCAAAGTGGGTGATAGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCTGTATTCAGCAATTTCAT-TTTCTGTGTATGATAATCAACAAGCATCTAAAACTACACAGTGGCTTTATACCATTACAAGGTTAATCTGATGTTATGTTTTTCTCTATC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60648826 180 + 64156825 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55789854 180 + 59248254 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47895902 180 + 51301725 TCTTGGGTCCACTGAGTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTATAGCCCAGCCACACTCAGCAATTGCAT-TTTCTGTGCATGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCATTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47603591 179 + 50890351 TCTTGGGTCCACTGACTAGAAGTTGCCAAAGTGGGTGATGGAGCAGGTAGGCAGGTATTAGAGCTACAGCCCAGCCGCACTCAGCAATT-CAT-TTTCTGTGCGTGATA---AACAAGAATCTAAAAATACACAGTGGCTTGATACCACTACAAGGTTAACCTGATGTTATGTTTTTCTCTATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7799 179 + 138250 TCCTGGGTCTCCCAAGTAGAAGTTGCCAAGGTGGGTGATGGAGCAGGTAGGCAGGTATTGGCGCTGTAGCCCAGCCGTACCCCGCAATTCCA--TTCCTCTGAATGATCATCAGCAAGCATCTAAAACTGCACAGTGGCTTTACACCATGACAGGGTTAATC---TGCTATCTTCTCCTCTATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064158 175 - 122678785 TCCTGGGTCCACGAAATAGAAGTTACCAAAGTGAGCTGTGTA----GTAGGCAGGTATTAGAATTAAATCCTGGATGTATCAATCAATTCCATCTCTCCAAACATGATA---CGAGATCACCCAAGATCATTCAACCATGCAAAAGCATTACAACATTAACCTGGTAT--TCTCTTTCCCTACC i canFam3.chr1 I 1205 C 0 e nomLeu3.chr10 103353377 1521 - 106955855 I a score=90709.000000 s hg38.chr19_GL949753v2_alt 711815 44 + 796479 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA s panTro4.chr19 59913558 47 + 63644993 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844162 47 + 60714840 ATCAGATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60649006 42 + 64156825 A---GATCAACATGGTTGAGAATA---------AGGAATG-AAAAAAAGGATTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790034 44 + 59248254 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-AAAAAAAGGATTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47896082 44 + 51301725 A---GATCAACATGGTTGAGAATA-------AGAGGAATG-aaaaaaaggattaa i papAnu2.chr19 C 0 I 984 s chlSab2.chr6 47603770 44 + 50890351 A---GATCAACATGGTTGAGAATA-------AGAGGAATGAAAAAAAAGGATTA- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 7978 51 + 138250 A---GATCAACATGGCTGGGAACAAGAAGAAAGAGGAATG-AACAAAAGGATTAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I a score=436022.000000 s hg38.chr19_GL949753v2_alt 711859 291 + 796479 AAAGAGAAATGAAAGTCTTTAATATTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaacctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggatgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca s panTro4.chr19 59913605 291 + 63644993 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtgcaggggcccgatctcagctcactgtaatctccgcctcccaggttcaagtgattctcctgtgtcagcttcctgagtagctgggattatagggacgcaccatcacacccaactaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56844209 292 + 60714840 AAAGAGAAATGAAAGTCTTTAATTTTACAttttattatttacttcatttattttttagacaaaaatctcactctattgctcagg-ctggagtacaggggcccggtctcggctcactgtaacctccacctcccaggttcaagtgattctcctgtgttagccccctgagtagctgggactatagggacgcaccatcatacccagctaacttttatattttta-gta-----gagatggacttttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacttcaagtggtctgcccacctcA i ponAbe2.chr19 C 0 M 764 s rheMac3.chr19 60649048 282 + 64156825 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790078 282 + 59248254 AAAGAGAAATGAAAGTCTTTAATTTTACAttttatt---------atttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtggcccgatctcggctcactgtaacatccacctcccaggttcaagtgattcttctgtctcagcctcctaagtagctgggactataggcatgcaccatcacacccagctaacttttatattttta-gta-----gagatggac-tttcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccccctca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47603814 276 + 50890351 AAAGAGAAATGAAAGTCTTTAATTTTGCAtttta-------------ttatttttgagacaaaaatctcactctgttgctcagg-ctggagtgcagtagcccgatctcggctcactgtaacatccacttcccaggttcaggtgattctcctgtctcagcctcctgagtagctgggactataggcacgtaccatcacacccagctaac--ttatattttta-gta-----gagatggac-attcac-catcttgcctaggctgg-------------------------------tctcaaactcctgacctcaagtgatctgcccacctca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8029 312 + 138250 AAAGGGAAATGAAAGTCTTTAAttgt--------tt---------atttatttctgagac-aagatctcattctgttgctcaggcctggagtgcagtggcctgatcttggctcactataacctctgcctcccagactgaagtgattctcctgcctcagcctcctgagtagctgcggctataggtgtgtacctccacacccagctaacttttatatatatatatatttatgagacggag-tttcactcttgttacccaggctggagtgcaatggcacgatctcggttcaccgcaacctccgccttctgggttcaagcagttctcctgcctca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=60030.000000 s hg38.chr19_GL949753v2_alt 712150 60 + 796479 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCATTTTATATTT s panTro4.chr19 59913896 60 + 63644993 ctctcccaaagtgctggcattacaggcatgacccaccacatctggccTCattttatattt i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649330 60 + 64156825 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCattttatattt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790360 60 + 59248254 ctctctcaaagtgctggcattataggcatgacccaccacatctggccTCATTTTATATTT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604090 57 + 50890351 ctctctcaaagtgctcgcattataggc---acccaccacatctggccTCATTTTATATTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 8341 60 + 138250 gcctcctgagtagctgggattacaggcacgtgccaccatgcccagcgaatttttgtgttt i calJac3.chr22_GL285922_random C 0 I 1056 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=174713.000000 s hg38.chr19_GL949753v2_alt 712210 209 + 796479 AAAAATAAAAAATAAGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcttgggcaac s panTro4.chr19 59913956 209 + 63644993 aaaaataaaaaataaGCAAATCAAGCCAGGTAcagtttaggcaacatggtaaaaccccaactctactaaaaatacaaaaattagctgagcatggtggcaggtgcctgtagtcccagctactcgggaggcagaggataggatggcttgaacccaagaggcacaggttgcagtgagctgagatggtaccactgcactccagcctgggcaac i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649390 204 + 64156825 aaaaat---aaataaGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgaggtggtgccactgcactctatcctgggcgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790420 204 + 59248254 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacgtggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47604147 204 + 50890351 AAAAAT---AAATAAGC-AATCAGGCCAGGTGCGgtctgggcaacatggtaaaaccccaactctattaaaaatac-aaaattagctgagcatggtggcaggcgcctgtagtcccagctactcaggaggcagaggataggatggcttgaaccctagaggcacaggttgcagtgagctgagatggtgccactgcactctatcctgggcaac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I a score=1692.000000 s hg38.chr19_GL949753v2_alt 712419 3 + 796479 aga s panTro4.chr19 59914165 3 + 63644993 aga i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60649594 3 + 64156825 aga i rheMac3.chr19 C 0 I 7 s chlSab2.chr6 47604351 3 + 50890351 aga i chlSab2.chr6 C 0 I 7 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C a score=26406.000000 s hg38.chr19_GL949753v2_alt 712422 319 + 796479 gagactgtctttttttttttttttttttttttttttttttttttttttGAGAtcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctgctgacctcgtgatccacccgcctcagcctcctaaagtgctgggaattacaggcgtgagccatcacgccccacctg s panTro4.chr19 59914168 298 + 63644993 gagactgtcttttttttttttttttttt--------------------gagatcgcccaggctggagtacagtggcacgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcgtccgccaccacgcccggctaattttttgtatttttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcctaaagtgctggga-ttacaggcatgagccatcacgcctcacctg i panTro4.chr19 C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e nomLeu3.chr10 103353377 1521 - 106955855 I e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47896126 984 + 51301725 I e macFas5.chr19 55790624 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=6095.000000 s hg38.chr19_GL949753v2_alt 712741 12 + 796479 agactgtctttt s panTro4.chr19 59914466 12 + 63644993 agactgtcttta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354898 12 - 106955855 agactgtcttta i nomLeu3.chr10 I 1521 C 0 s macFas5.chr19 55790624 10 + 59248254 agactgtctc-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897110 10 + 51301725 agactgtctc-- i papAnu2.chr19 I 984 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e calJac3.chr22_GL285922_random 8401 1056 + 138250 I e chlSab2.chr6 47604354 7 + 50890351 I e rheMac3.chr19 60649597 7 + 64156825 I a score=1092.000000 s hg38.chr19_GL949753v2_alt 712753 2 + 796479 aa s panTro4.chr19 59914478 2 + 63644993 aa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354910 2 - 106955855 aa i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 9457 2 + 138250 aa i calJac3.chr22_GL285922_random I 1056 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M e chlSab2.chr6 47604354 7 + 50890351 I e papAnu2.chr19 47897120 0 + 51301725 C e macFas5.chr19 55790634 0 + 59248254 C e rheMac3.chr19 60649597 7 + 64156825 I a score=25602.000000 s hg38.chr19_GL949753v2_alt 712755 13 + 796479 aaaaaaaaaaaaa s panTro4.chr19 59914480 13 + 63644993 aaaaaaaaaaaga i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354912 11 - 106955855 aaaaaaaaaaa-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649604 13 + 64156825 aaagaaaaaaaga i rheMac3.chr19 I 7 C 0 s macFas5.chr19 55790634 13 + 59248254 aaagaaaaaaaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897120 13 + 51301725 aaagaaaaaaaga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604361 13 + 50890351 aaagaaaaaaaga i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 9459 13 + 138250 aaaaaaaaaaaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20064333 0 - 122678785 C e ponAbe2.chr19 56844501 764 + 60714840 M a score=101607.000000 s hg38.chr19_GL949753v2_alt 712768 39 + 796479 aa--------aTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC s panTro4.chr19 59914493 47 + 63644993 aagaaagaaaaTCAATGTGGAACACTCC-TTTGCCACCTAGAATAATC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103354923 38 - 106955855 ----------aTCAATGTGGAACACTCCTTTTGCCACCTAGAATAATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649617 39 + 64156825 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55790647 39 + 59248254 aa--------aTCAATATGGAACACTCC-TTTGCCACGTAGAATAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897133 39 + 51301725 aa--------atcaatatggAACACTCC-TTTGCCACCTAGAATAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604374 39 + 50890351 aa--------aTCAATATGGAACACTCC-TTTGCCACCTAGAATAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9472 39 + 138250 aa--------aTCAATATGGAATGCTCC-TTTGCCACACAGAATAATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064333 39 - 122678785 AA--------ATCAATATGGAACCCTGA-TTTGCAGCATACAGTAATC i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56844501 764 + 60714840 M a score=1563064.000000 s hg38.chr19_GL949753v2_alt 712807 531 + 796479 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATCGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGCAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCGGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAT-----ACCTGCACACATC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG s panTro4.chr19 59914540 531 + 63644993 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAA-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATTGATACTGAGAAACATCATCCCTGGGAAGAAAGGCCTTCTTCTCATGACTTCATGATCTGAAT-CCCCCTGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTCCTCCCCCGCCCCTACCCCTCAGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACCTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGCTTTGACAAGTTAGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845265 530 + 60714840 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTCCTTGGGAATTTGAAACAAATCTCCTTCATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCAATAAGCTGCTGGAAGAAATAGAAGAAAAAAACCCACAACTGATTATCGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCGTGATCTGAATCCCCCCCGAGTCATTCATTCTCCA-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTC--CTCCTCCCCCGCCCCCACTCCTCGGGGATAATGAGTTCATTGCTGGGCTAGATGT---TTTAGCCATGATTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTATCTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATAGGCTTTGACAAGTTAGAG i ponAbe2.chr19 M 764 C 0 s nomLeu3.chr10 103354961 522 - 106955855 AGGAAAGGTGACCCATGCCCTGTGCCTCCT---------TAACAGAC-TTTCAGGTACTTGGGAATTTGAAACAAATCTCCTTGATGCACAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAATAGATAACTTTAATGATGAACTCGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGGCCTTCTTCTCATGACTTCATGATCTGAATCCCCCCTGAGTCATTCATTCTCCG-TGAAGTCATCGATTTTCCAGGTGTTGGTGAACTGCTGGTGACTC--CTCCTCCCCCGCCCCCACTCCTCAGGGATCATGAGTTCATTGCTGGGCTAGGTGT---TTTAGCCATGATTCTGCCTCTGTTTGAC-----ACGTGCACACGTC----------CTTTGTTACATATGAAATATCTGTATCACGGGTATATTGAGAGAAATAAAGGTGAGA--GCAATCACAAGTGAAGCTGTTACT---TAATGGGCTTTGACAAGTTAGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60649656 514 + 64156825 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTTGATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTCCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACGTTAGAG i rheMac3.chr19 C 0 I 305 s macFas5.chr19 55790686 514 + 59248254 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATAAACAAAGTAACCTTTTCCTCCCCCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCGTTCATTCTGCA-TGAAGTCGTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGCTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGACTTTGACACTTTAGAG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47897172 510 + 51301725 AGGAAAGGTGA----------------CCT---------CAACAGAATTTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCTCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGctggaagaaatagaagaaaacaacccACAACTGATTATTGATACTGAGAAACATGATCCCCGGaaaaaaaGACCTTCTGCTCATGACTTCATGATCTGAATCCCCCC-GAGTCGTTCATTCTCCA-TGAAGTCgttgattttccaggtgttggtGAACTGCCTGTGACTCCTCTTCTCCCCCGCCCCCACTCCTCAGGGATAATGAGTTCACTGCTAAGCTAGATGT---TTCAGCCATGGTTCTACCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACTGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTG----TTAATAATGGACTTTGACACGTTAGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604413 511 + 50890351 AGGAAAGGTGA----------------CCT---------CAACAGAA-TTTCAGGTACTTGGGAATTTGAA--AAATCTTCTTGATACACAAAGTAACCTTTTCCTCCCGCATTGT-ACCCCAGGTTGAAAATAGATGACTTTAATGATGAACTCCATAAGCTGCTGGAAGAAATAGAAGAAAACAACCCACAACTGATTATTGATACTGAGAAACATGATCCCTGGAAAAAAAGACCTTCTTCTCATGACTTCATGATCTGAATCCCCCCAGAGTCATTCATTCTCCA-TGAA---GTTGATTTTCCAGGTGTTGGTGAACTGCCTGTGACTCCTCTTCTCCCCCACCCCCACTCCTCAGGGATAATGAGTTCACTGCTAGGCTAGATGT---TTCAGCCATGGTTCTGCCTCTGTTTTAC-----ACGTGCACACGTC-----CTTAACTTTGTTACATATGAAATATCTGTATCACGGGTACATTGAGAGAAATAAAGGTGAGA--GCATTCACAAATGAAGCTGTTACTTAATAATGGGTTTTCACAAGTTAGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 9511 514 + 138250 AGGAAAGGTGAGCCATGCTCTGTG---CCT---------------------------CTTGGAACTTTGAAACAAGTCTCCTTGACACAAAAAGTAACCTTTTCTTCCCCCATTGT-ACCCCAGGTTGAAAGTAGATGACTTTACTGATGAACTCGATACGCTGCTGACTGAGATAGAAGACAGCAACCCGCAGCTGACTATTGATACCGAGAGTCAAGAGCCCTGGAAGAAAAGGCCTTCTTCTCGCTACTTCACCGTCTGAATCCCCCCAGAGTCCTTCATTCTCAG-GGAAGACAAGCATTTCCCAGGTGTTGGTGAACTGCCTGCGACTC--CCCCCACCCTGCCCCCTCTCCTCGGGGA-AAGGAGCTGGTTGCTGGGCCAGGTGT---TTTAGCCGCGGTTCTGCCTCTGGTTCACGTAGAACCTGCATACGTC-----CTTGACCTTGTTACGTATGAAACGTCTGTATCACGGGTGTGTGGAGGGAAATAAAGGTGAGA--GCATTCGCAGATGAAGCTGTTACATAGTAATGGGCTGTGACCAGTTAGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064372 521 - 122678785 AGTAAATATTGCCCCTGCC--------CCTGCTCTAAAGTATGAGAC-TTGCAGGCACTTGGGCATTTGGAATGAATCTCCTTGAAGCAACAAGAAACCTTCCTTTGTCCCATTGTAACTCCAGGTTGAAGATAGATGAATCTGATCCTCGAATCCAGAAGCTGCTAAAAGAAATCCAAGAATATGACCCACAACTGACCATCGAGAGTGATGACCAAGATCCAACCAATAACCGGCCTTCTTCACATGACTTCATTTTCTGAAT-CCCCTGGACTTATTCCTTCCCAAGTAAAATCCAGGATCATCAACATGATGTTGAACTTCCTCTGAGCC--------------------CTCTCAGTGAT-----GTTATGTGCTGGGCCAGATGTTACTGTATCCCTGGTTGTGCCTTCAGCTTCTATGAAACATGCACAGGTGGTTTACTTACCCCTATTATGGACAGAATGCCTATATCTTGAGTCTATCAAGAGCAATAAAGGTGTGAATGCATTCATGAAGGAGATTCT---TTATTAATGGATTCTGACCAAACATAG i canFam3.chr1 C 0 C 0 a score=17443.000000 s hg38.chr19_GL949753v2_alt 713338 6 + 796479 --AAAAGA- s panTro4.chr19 59915071 6 + 63644993 --AAAAGA- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845795 6 + 60714840 --AAAAGA- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355483 6 - 106955855 --AGAAGA- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650475 6 + 64156825 --aaaaGA- i rheMac3.chr19 I 305 C 0 s macFas5.chr19 55791200 6 + 59248254 --AAAAGA- i macFas5.chr19 C 0 I 317 s papAnu2.chr19 47897682 6 + 51301725 --AAAAga- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47604924 6 + 50890351 --AAAAGA- i chlSab2.chr6 C 0 I 304 s calJac3.chr22_GL285922_random 10025 6 + 138250 --AAAAGA- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064893 9 - 122678785 ACAGAAAAA i canFam3.chr1 C 0 C 0 a score=7153.000000 s hg38.chr19_GL949753v2_alt 713344 3 + 796479 TAT s panTro4.chr19 59915077 3 + 63644993 TAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845801 3 + 60714840 TAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355489 3 - 106955855 TGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650481 3 + 64156825 TAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791523 3 + 59248254 TAT i macFas5.chr19 I 317 C 0 s papAnu2.chr19 47897688 3 + 51301725 tat i papAnu2.chr19 C 0 I 585 s calJac3.chr22_GL285922_random 10031 3 + 138250 TAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064902 3 - 122678785 TAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=210578.000000 s hg38.chr19_GL949753v2_alt 713347 96 + 796479 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC s panTro4.chr19 59915080 96 + 63644993 CTTA-CTGGGTAGAACCT----------GGGGGGTGGGGGAAG-TGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845804 96 + 60714840 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAA-TGACAGTGTTTAATTGCATTCATTTCTATTCCCTTGTCAATCTTTGCCTTGCCT---TGGTATTTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355492 95 - 106955855 CTCA-TTGGGGAGAACCT-----------GGGGCTGGGGGAAG-TGACCATGTTTAATTGCGTTGATTTCTATTGCCTTGTCAATCTTTGTCTTGCTG---TGGTAttttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650484 100 + 64156825 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTATTTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55791526 100 + 59248254 CTTA-CTGGGGAGAACCT----------GGGGGGTGGGGGAAGTTGACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCTTGGTAtttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898276 100 + 51301725 cTTA-CTGGGGAGAacct----------ggggggtgggggaagttgACAGTGTTTAATTGCATTGATTTCTATTGCCTTGTCAATCTTTGCCTTGCCTTCctggtatttcc i papAnu2.chr19 I 585 C 0 s calJac3.chr22_GL285922_random 10034 89 + 138250 CTTA-CTGGGGAGAACTT-----------GGGGGTGGGGGAGG--GACTGTGTTTAGTTGCATTGATTTCTGTCGCTTTGCCAGTCTTTGCCT--------TCGTAtttcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20064905 105 - 122678785 TTTATTTGGGGAGAACCTAACACAGAAGGAAAAACGGGGACAG--AAATGTTTGTGATCTCCTTGGTCTGT-TCACCTTGCCAGTCACTGCCCAGTTC---TGGCATTCCT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47604930 304 + 50890351 I a score=2092.000000 s hg38.chr19_GL949753v2_alt 713443 20 + 796479 tttcttttttcttttctttt s panTro4.chr19 59915176 12 + 63644993 tttcttttttc--------t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845900 11 + 60714840 tttcttttttc--------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355587 20 - 106955855 tttcttttatctttcttttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60650584 20 + 64156825 Tttttttttttttttttttt i rheMac3.chr19 C 0 I 166 s macFas5.chr19 55791626 6 + 59248254 tttttt-------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898376 5 + 51301725 ttttt--------------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10123 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=53952.000000 s hg38.chr19_GL949753v2_alt 713463 45 + 796479 tttttttttttttttttagac---tgagtttcactctgttgcccacgc s panTro4.chr19 59915188 45 + 63644993 ttctttcttttttttttagac---tgagtttcactctgttgcccacgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845911 42 + 60714840 -tttttcttttttttttagac-----agtttcactctgttgcccatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355607 43 - 106955855 tttttttttttttttATAAAAGAATGAGTTTCATTCTGTTGCC----- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791632 46 + 59248254 ttttttctttttttttaagat--ttgaatttcactctgttgcccatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898381 46 + 51301725 ttttttttttttttttaagat--ttgaatttcactctgttgcccatgc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10123 45 + 138250 tttttctttctttcttgagat---ggagctgcactctgttgcccaggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=137868.000000 s hg38.chr19_GL949753v2_alt 713508 139 + 796479 tggagtacactggcacgatctcagcttactacaacctggcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat s panTro4.chr19 59915233 139 + 63644993 tggagtacactggcacgatttcagcttactacaacctcccaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaagcatcccccaccacacccggctaaatttttttgt---atttttaatagagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56845953 139 + 60714840 tggagtacagtggcacgatctcagcttactacaacctctcaggttcaagcgattctcctgtctcagcctcctgagtagctgggattacaggcatccctcaccacacccagctaaatttttttgt---atttttagtagagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355650 94 - 106955855 ---------------------------------------------caagcgattctcctgtttcagcctcatgagtagctgcgattacaggcatcccccaccacacccggctaaatttttttct---atttttagtagagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55791678 139 + 59248254 tggagtgcagtggcacgatctcagctcattacaacctcccaggttcaagcgatt---ctgtctcagcctcccgagtagctgggattacaggcattccccaccacacccagctaaattttttttttaaattcttagtacagat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898427 139 + 51301725 tggagtgcagtggcacgatctcagctcactacaacctcccaggttcaagtgatt---ctgtcttagcctcccgagtagctgggattacaggcattccccaccacacccagctaatttttttttttatattcttagtacagat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60650604 166 + 64156825 I a score=374869.000000 s hg38.chr19_GL949753v2_alt 713647 242 + 796479 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttttt--ctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct s panTro4.chr19 59915372 233 + 63644993 gaggtttcaccatgttggccagtctggtctcaaactcctgacctcaagtgatccacccacctcagcctcccagagtgctgggattacaggcatgagccactgtacccggctttttttttt-----------tt--tttcctcaagcacgag-----------tgttgctc---tgttgcccaggctggaatacagcagcatgatgatagctcactgcagcctcaagctcccaggttcaagcgatcctccagcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846092 243 + 60714840 gaggtttcaccatgttggccagtctggtcttaaactcctgacctcaagtgatccgtccacctcagcctcccagaatgctgggattaca-gcgtgagccactgcacccggctttttttttttttcctttttctt--tttcctcaagcatgag-----------tgttgctc---tgttgccctggctggaatacagcagcgtgatgatagctcgctgcagcctcaagctcccaggttcaagcgatcctccagcctcaacct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103355744 243 - 106955855 gaggtttcaccatgtcggccaggctggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccagaatgctgggattacaggcacgagccactgcacccggcttttttttt------------tt--tcccctcaagcatgagtgttgttgctctgttgctc---tgttgcccaggctggaatccagcagcatggttatagctcactgcagcctcaagcacccaggttccagcgatcctccagcctcaacct i nomLeu3.chr10 C 0 I 837 s rheMac3.chr19 60650770 235 + 64156825 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--cctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagcttgcaggttcaagtgatcctccagcctcaacct i rheMac3.chr19 I 166 C 0 s macFas5.chr19 55791817 235 + 59248254 gaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccagcctttttttttttt--------tt--tctcctcaagagtgag-----------tgttgctctgttgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcgagctcgtaggttcaagtgatcctccagcctcaacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898566 234 + 51301725 gaggtttcaccatgttgaccaggctggtctcaaactcctgacctcaagtgatccgcccacct-aaactcccagagtgctgggattataggcatgagccactgtacccggcccttttttttttc--------ttccccccctCAAGAgtgag-----------tgttgctc---tgttgcccaggttggagtacaacagcacg---atagctcactgcagcctcaagctcgcaggttcaagtgatgctccagcctcaacct i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=236535.000000 s hg38.chr19_GL949753v2_alt 713889 196 + 796479 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga-----------ttttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTGT s panTro4.chr19 59915605 195 + 63644993 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgttgcccaggctgatctcaaactcccaggcgcaagtaatattcctgcctcagcctcccaaagtgctagga-ttacaggtgtgaaccactgtgcctagccTGTCTTGTTACTTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846335 195 + 60714840 cctcagtagctgggactacaggtgcacaccaccaaaccaggccaatttttgtggga------------tttttttgaagacagggtctcactatgtcgcccaggctgatctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaggtgtgagccaGTGTGTCTAGTCTGTCTTGTTACTTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651005 207 + 64156825 cctcagtacctgtgactacagatgcacgccaccaaaccaggccagttcttggggttttttttttttcttttttttttgaacaggttctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792052 201 + 59248254 cctcagtagctgtgactacagatgcacgccaccaaaccaggccagttcttggggtttttt-------ttttttttcaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatactcctgcctcagcctcccaaagtgctgggatttacaagtgtgagccactgtgcccagccTGCCTTGTTATTTCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898800 199 + 51301725 cctcagtagctgtgactacagatgcacgccaccaaaCCAGGCCAgttcttggggttttt--------ttttttttgaagacagggtctcactatgttgcccaggctggtctcaaactcccaggctcaagtaatattcctgcctcagcctcccaaagtgctggga-ttacaagtgtgagccactgtgcccagcctgccttGTTATTTCT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065010 0 - 122678785 C e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=185509.000000 s hg38.chr19_GL949753v2_alt 714085 125 + 796479 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT s panTro4.chr19 59915800 125 + 63644993 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-TCTACAATA-----------TTTTAGGTGCTTCGGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846530 125 + 60714840 TGACCTGCGTGGATCACTGCCTGCTGAGTATTACTTGCCAGAGGATTTCTCCTACCAA-CCTACAGTA-----------TTTTAGGTGCTTGAGTGTAGCTCATATATGACCATGTCATTGCTCTGATTTTGCTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60651212 124 + 64156825 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACAACCATGTCATTGCTCTGA-TTTGCTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792253 124 + 59248254 TGACCTGCATGGATCACTGCCTGTTGAGTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATCCAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCTCTGA-TTTGCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47898999 124 + 51301725 TGACCTGCATGGATCACTGCCTGTTGACTGTTACTTGCCAGAGGATTTCTCCTACCAA-CATACAATA-----------TTTTAGGTGCTTCAGTGTAGCTCATATACGACCATGTCATTGCtctga-tttgctttt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065010 127 - 122678785 TGATCTGTGTGGGTAGCTGCCTGATGG----TCTTCTTCAGAGTATTTCTCCTACCAATCCTACAACAGTTTGTAGCATTCTTAAGTGCTTCAGTGAAGCCCATATATGA-----TCATTTCTTTGA-TCAACTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103355987 837 - 106955855 I e chlSab2.chr6 47604930 304 + 50890351 I a score=24787.000000 s hg38.chr19_GL949753v2_alt 714210 15 + 796479 TAAAAATTCTAACTT s panTro4.chr19 59915925 15 + 63644993 TAAAAATTCTAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56846655 15 + 60714840 TAAAAATTCTAACTT i ponAbe2.chr19 C 0 T 32152 s nomLeu3.chr10 103356824 9 - 106955855 taaaaatac------ i nomLeu3.chr10 I 837 C 0 s rheMac3.chr19 60651336 15 + 64156825 TAAAAATTCCAACTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55792377 15 + 59248254 TAAAAATTCCAACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899123 15 + 51301725 taaaaattccaactt i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20065137 15 - 122678785 TAGTAATTCCAACCT i canFam3.chr1 C 0 I 1307 e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=47356.000000 s hg38.chr19_GL949753v2_alt 714225 51 + 796479 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act s panTro4.chr19 59915940 51 + 63644993 AAAATAGAATCT------Cggccaggcacggtggctcacacctgtaatcccagc-act i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356833 50 - 106955855 aaaaaaaaa--t------tagctgggcgtggtggcgggcgcctgtagtcccagctact i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60651351 57 + 64156825 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCGCAGC-act i rheMac3.chr19 C 0 I 864 s macFas5.chr19 55792392 57 + 59248254 AAAATAGAATCTTTTCTATTGCCAGGCACGGTGGCTTACATCTGTAATCACAGC-act i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899138 57 + 51301725 AAAATAGAATCTTTTCtattgccaggcacggtggcttacatgtgtaatcgcagc-act i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=8146.000000 s hg38.chr19_GL949753v2_alt 714276 16 + 796479 tcgggaggctgaggtg s panTro4.chr19 59915991 16 + 63644993 tcgggaggctgaggtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356883 16 - 106955855 tggagaggctgaggca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55792449 14 + 59248254 --cctaagctcaggtg i macFas5.chr19 C 0 I 65 s papAnu2.chr19 47899195 16 + 51301725 ttgggaggctgaggtg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=217037.000000 s hg38.chr19_GL949753v2_alt 714292 502 + 796479 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctcc-----aaaaaaaaacaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCATTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCATG s panTro4.chr19 59916007 507 + 63644993 ggtggat--cacgaagtcaggagttggaga------------------------------ccaacctggccaacgtggtgaaaccccgtctctactaaaaatataaaaaattagccaggcatggtggtacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggatgttgcactgtgctgaagactgcactactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTATAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTACGctgtaaaaccacaaacaaaacgaactgtactataaagacaacactagttggcaaagttgcttctcatggggagac-------tt--tgttgctgtctgtgtttactggatgagcaaacaaatggacggtAAGGGGGAAAAAGAACAGTACAAATTTTTATTAAACACT-----AATCGTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103356899 533 - 106955855 ggagaatggcgtgaacccgggaggcagagcttgcagtgagcgagattgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaatatataaaaaattagacaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttaaacccaggaggtggaggttgcactgtgctgaagactgcattactgcattccagcttgggcaacagagtgactccttctccaaaaaaaaaaaaaaaaaaaTCTCATGGTATGCATAGTTTTTCACTACAGAGTCTCCAGTATTTCCTTGTGATACAGAATTCCAAATTCAACAAAGCAGCAGTGCAAGCTCTATGctgtaaaaccacaaacaaaaggaactgtactataaagacgacactagttggcaaagttgcttctcatggggAGAC-----------TGTTG----CTGTGTTTACTGGATGAGCAAACAAAT----GGTAAGGGGGAAAAATAACAGTACAAATTTTTATT-AATACTAATAAAATCATG i nomLeu3.chr10 C 0 I 2 s papAnu2.chr19 47899211 492 + 51301725 ggcggat--cacaaggtcgggagttcgaga------------------------------ccagactggccaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggtgtggtggcacgtgcctgtaatctcagctacttgggaggctgaggcaggagaattgcttaaacccagaaggcggaggttgcattgagttgAAGACtgcgctattgcactctagcctgggcaac--agcaactctgtctca-----aaaaaaaacaaaaa---catggtatGCCTAGTTTTTCTCTATAGAGTCTCCAGGATTTCCTTGTGATACAGAATTCCAAGTTCAACAAAGCAACAGTGCAAGCTCTACACTGTAAAACCACAAACAAAAGGAACT--------------ACTCAAGTTGGCAAAGTTGCTTCTCATGGGGAGACAATAACTTTAACATTGCTGTCTGTGTTTACTGGATGAGCAAACAAATGGATGGTAAGGGGGAAAAATAACAGTACAAGTTTTTATTAAACact-----aataaaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e macFas5.chr19 55792463 65 + 59248254 I e rheMac3.chr19 60651408 864 + 64156825 I a score=171291.000000 s hg38.chr19_GL949753v2_alt 714794 271 + 796479 tttttttttgtttgttttgagacagtttc-ttct-tgttgcccaggctggagtgcaatggcacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattataggcatgtgccaccaagcctggctaa-ttttgaatttttagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccagccttggtctcccaaagtgctgggat s panTro4.chr19 59916514 267 + 63644993 -ttttttttgtttgttttgagacagtttc-ctct-tgttgcccaggctggagtgcaatgacacgattttggctcactgcaacctccgcctccccgggttcaagcgattctcttgcctcgacctactgagtagctgggattacaggcatgtgccaccaagcctggctaa-ttttg---tattagcagagacggggtttttccatgttggtcaggctggtctcgaactcccgacctcaggtgatccaccggccttggtctcccaaagtgctgggat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357434 271 - 106955855 tttttgtttgttt-ttttgagacaggttcactct-tgttgcccatgctggagtgcaatggaactattttggctcattgcaacctccacctccccaggttcaagcgattctcctgcctcaacctcccaagtacctggtattatatgcatatgccaccccgcctacctaa-ttttgtatttttagcaaaaacggggtttttccatgttggtcaggctggtctccaactcccgaactcaagtgatccaccggccttggtctcccatagtgctgggat i nomLeu3.chr10 I 2 M 100 s macFas5.chr19 55792528 273 + 59248254 ttctttttttttttctttgtggcagaatcttgctatgtcgcccaggctggagtgcaatggcacaatctcagctcattgcagcctccgcctcctc-atttcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaatttttgtattttttgtagagacagggtttcaccaggttgcccagactggtctcgaactactgagttcaggtgatctgcccagcttggcctccccaagtggtgggat i macFas5.chr19 I 65 C 0 s papAnu2.chr19 47899703 269 + 51301725 --taacttttttttttttgagacagtttcactct-tgttgtccaggttggagtgcaatggcacgattttagcacaccgcaacctccacctcccctggttcaagcgattctcctgcctcggcctcccgagtagctgggattacaggtgc-cgccaccgcacctggctaa-ttttgtatttttagtagagacagggttttaccatgttgatcaggctggtctcgaagtcctaacctcaggtgatccacctgccttggtctcccaaagtgctgggat i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=42046.000000 s hg38.chr19_GL949753v2_alt 715065 127 + 796479 tacaggtataagtcaccgcacctggcAACAtttttttcttttttttttttttttttttttttttttttGGTGGcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcgggtcac s panTro4.chr19 59916781 120 + 63644993 tacagctatgagtcaccgcacctggcAACATttttttc-------cttttctttttttttttttttctggtggcagaatcttgctctttcacccaggctggaatgcaatggcacgatctcggctcac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55792801 119 + 59248254 tgtatgtctgagccaccacacctggccAAAAGTAGtt--------ttaattttttttttttttttttttgagacggagtcttgctctgttgcccaggctggagtgcagtggcacgatctcagctcac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47899972 107 + 51301725 tacaggcgtaagtcaccgcacccagcaaca--------------------tttctttttttttttctttgtggcagaatcttgctctgttgcccaggctggagtgcaatggcacgatctcagctcac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e nomLeu3.chr10 103357705 100 - 106955855 M e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=165485.000000 s hg38.chr19_GL949753v2_alt 715192 236 + 796479 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgcatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT s panTro4.chr19 59916901 236 + 63644993 tgcagcctccacctccccagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtagagatagggttttgccacgttgtccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaaatgctgggattataggcatgagccaccacacctggTAAAAAGTAGtttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103357805 236 - 106955855 tgcagcctctacctcccaagtttaagcagttctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcacccaggtaa-tttttgtatttttggtaaagatagggtttcgccacgttgcccagactggtcttgaactcctgagctcaggtgatctgcccaccttggcctccccaagtgctgggattataggcatgagccaccacacctggtcAAAAGTAGTTTT i nomLeu3.chr10 M 100 C 0 s macFas5.chr19 55792920 222 + 59248254 tgcaagctccgcctcctgggccgacgccattctcctgcctcagcctcccgagtagctgggaccacaggtgcccgcctccgcacccggctaattttttgtatttttagtagagacgggatttcactgtgttagccaggatggtctcgatctcctgacctt--gtgatccacccggctcggcctcccagactgctgggattacaggcgtgagccaccgcacccggc------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900079 236 + 51301725 tgtagcctccacctccccatatcaagcaattctcccatctcagcctcccatgtagctgggaccacaggtgtgcaccactgcagccaggtaa-tttttgtattttttgtagagacagggtttcaccatgttgcccagactggtcttgaactactgagttcaggtgatctgcccagcttggcctctcCAAGTGGTGGGATTGTAtgtctgagccaccacacctggccaaaagtagtttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I e rheMac3.chr19 60651408 864 + 64156825 I a score=209469.000000 s hg38.chr19_GL949753v2_alt 715428 166 + 796479 AATATTTAAATTTAAAACTAAAAAAGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT s panTro4.chr19 59917137 166 + 63644993 aatatttaaatttaaaactaaaaaaGTTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCTATTGGTTTATTCCCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACAGTGTGGGCTTCTGAGGT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103358041 166 - 106955855 AATATTTAAATTTAAAACTAAAAAAATTAATCTCTCT-TCCTACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTCTCACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACTACTCCATCACTTTCCAGTTCCACTGCATACAGTTTGGGCTTCTGAGGT i nomLeu3.chr10 C 0 I 16 s rheMac3.chr19 60652272 167 + 64156825 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATGCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i rheMac3.chr19 I 864 C 0 s macFas5.chr19 55793142 167 + 59248254 AATATTTAAATTGAAAACTAAAAAAATTAATCTCACTCTTACACTTTCATTTCTTCATCAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900315 167 + 51301725 aatagttaaatttaaaactaaaaaaattaatcttactCTTACACTTTCATTTCTTCAACAGGGGCCATTGGTTTATTTTTACCGACTAGATCCAAGTTCTCTGATACTACCTTTAAACCACTCCATCACTTTCCAGTTCCACTGCATACTGTGTGGGCTTCTGAGTT i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e ponAbe2.chr19 56846670 32152 + 60714840 T e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=129088.000000 s hg38.chr19_GL949753v2_alt 715594 92 + 796479 TTCCTGGTTCAAGGTGTCCTTGTTCAATGCGGCATGG-GTCATTCCCTGAGCAtttt-----------------------tttttttttttgacagtctcgctccattgcccggtt s panTro4.chr19 59917303 99 + 63644993 TTCCTGGTTCAAGGTGTCCTTGTTCAATGTGGCATGG-GTCATTCCCTGAGCAtttt----------------gtttttgtttttttttttgacagtctcgctccattgcccggtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814518 100 + 60714840 TTCCTGGTTCAAGGTCTCCTTGTTCAATGGGGCACGGTGACATTCCCTGAGCAtttt----------------ttttttttttttttttttgacagtctcactccgttgcccggtt i ponAbe2.chr19 T 32152 C 0 s nomLeu3.chr10 103358223 95 - 106955855 TTCCTGGTTCAACGTCTCCTTGTTCAATGGGGCATGG-GTCATTCCCTGAGCAtttt--------------------ttttttttttttttgacagtctcgctccattgcctggtt i nomLeu3.chr10 I 16 C 0 s rheMac3.chr19 60652439 111 + 64156825 TTCCTGTTTCAAGGTCTCCTTACCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCA----CTCttttttttttttttttttttttggacagtctcgctccattccctggtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793309 115 + 59248254 TTCCTGTTTCAAGGTCTCCTTATCCAACACAGCATAG-GTCATTCCCTGAGCATCCCCCCCGCCttttttttttttttttttttttttttGGACagtctcgctccattccctggtc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900482 95 + 51301725 TTCCTGTTTCAAGGTCTCCTTATCCAACCCAGCACAG-GTCATTCCCTGagccccctcccc--------------------tttttttttggacagtctcGCTCCATTCcctggtc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e calJac3.chr22_GL285922_random 10168 0 + 138250 C e chlSab2.chr6 47604930 304 + 50890351 I a score=121095.000000 s hg38.chr19_GL949753v2_alt 715686 56 + 796479 tggagtgcagtggtgtgacctcggcttactgcagcctctgcctcccaagttcaagc s panTro4.chr19 59917402 56 + 63644993 tggagtgcagtggtgtgacctcggcttattgcagcctctgcctccgaagttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814618 56 + 60714840 tggagtgcagtggtgtgatctcagcttactgcagcctctgcctcccaagttcaagc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358318 56 - 106955855 tggagtgcagtggtgtgatctcggcttcctgcagcctcttcctcccaagttcaagc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60652550 56 + 64156825 tggagtgcagtggcgtgatctcggctcactgtaacctccgcctcccaagttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793424 56 + 59248254 tgaagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900577 56 + 51301725 tggagtgcagtggcgtgatctcggctcactgcaacctccgcctcccaagttcaagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 10168 50 + 138250 tggagcgcagtggtgtgatttcaactcactgcaacctccgcctcccaggt------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I e chlSab2.chr6 47604930 304 + 50890351 I a score=1040625.000000 s hg38.chr19_GL949753v2_alt 715742 442 + 796479 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgcgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAGGTTGGTAAAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtagaaaatatttcctgaaatgc s panTro4.chr19 59917458 441 + 63644993 aattctgcct--caggctcccggataatttttgcatttttagtagagaca-gggtttcaccgtgctggccaggctggtctcgaacccctaacctcaagcgatctgcctgcctcggtctcccaaagtgctgggattacagacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGAGAAGGTTGGT-AAAAGAGAGGCACAAAGTTTAAAAAGGACATTGCGTGAAGAAACTAaaggtttctccttctccacactattgaca-tttgggatcggatcactactcgttgggaaac---gtcctgtacatttccagggtgttcggcaccatccctagcctctaccccctagataccagctcacatcctcacagttaacagtgatcaaaaatgtctctgggcagtggaaaatatttcctgaaatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56814674 439 + 60714840 aattctgcct--cagccttccggataatttttgcatttttagtagagaca-gggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatcctcctgcctcggtctcccaaagtgctgggattacacacataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGTTGGT-AAAAGAGAGGCACAAAGTTTGAAAAGGACGTTGCATGAAGAAACGAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttgggaaacatggtcctgtacatttacagggtgtttggcaccatccctagcctctaccccctagataccag----catcctcacagtt-atgatgaccaaaaatgtctctgggcattagaatatatttcctgaaatgc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358374 439 - 106955855 aattctgcct--caggctcctggataatttttgcatttttagtagagaca-aggtttcaccgtgttggccaggctggtcttgaacccctaacctcaagcgatccgcctgcctcagtctcccaaaatgctgggattacagacataagctaccgtgcccgaccTCCAGAGCATCTTTATTCTCAGTTTCAGCGGGAAGAAGGGGGAAAGGTGGT-AAAAGAGAGGCATAAAGTTTAAAAAGGACATTGCATGAAGAAACTAaaggtttctcattctccacactattgaca-tttggggtgagatcactgcttggtgggaagcatggtcctgtacatttacacggcgcctggcaccatccccagcctccaccccctggatgccag----catccccccagtg-atgatgatcaaaaacgtctctgggctgtagaaaatacttcctgaaatgc i nomLeu3.chr10 C 0 I 115 s rheMac3.chr19 60652606 421 + 64156825 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctaccgtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcct--cagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793480 423 + 59248254 aattctgccccacacactcccggcaaatttttacatttttagt--agaca-ggatttcaccatgttggccaggctggtcttgaa---ctgacctcaagtgatccacctgcctcagcctcccaaagtgctggaattacagaaataagctacagtgcccggccTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGCGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctcattctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagtatgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-atgacgatcaaaaatgtctctgggcattagaaaatatttgctgaaatgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47900633 425 + 51301725 aattctgccc--cagactcctggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccaaagtgctgggattacagaaataaGCTACCGGGCCCGGCCTCCAGAGCATCTTTATTCTCAGGTTCACTGGGAGGAAGGGGGAAAGTTGAC-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAAAGGTTTCTCATTCTccacactattgaca-tttggggtcAGATCACTACTTGTTAGGAAACATGGTCCTCTACATTTACAGTATGTTTGGCAGCATCCctagcctctacccactagataccag----CATCCTCACAGTC-ACGATGATCAAAAATGTCTCTggacattagaaaatatttactgaaatgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605234 423 + 50890351 aaTTCTGCCC--CAGactcccggcaaatttttgcatttttagt--agacaggggtttcaccatgttggccaggctggtcttgaactcctgacgtcaagtgatccacctgcctcagtctccgaaagtgctgggattacagaaataaactactgtgcccagGCTCCAGAGCATCTTTATTCTCAGGTTCACCGGGAGGAAGGGGGGAAGTTGGT-AAAAGAGAGGCACAGAGTTTTAAAAGGAC-------------ACTAaaggtttctccttctccacactattgaca-tttggggtcagatcactacttgttaggaaacatggtcctctacatttacagggtgtttggcagcatccctagcctctacccactagataccag----catcctcacagtt-acgacgatcaaaaatg--tctgggcattagaaaatattcactgaaaggc i chlSab2.chr6 I 304 C 0 s calJac3.chr22_GL285922_random 10218 346 + 138250 ---------------------------------------------------------------------------------------------ttaagcaatccacctgcctcagcctccccaagtgctggaatgacggacatgagctatcgcgcctggcCTCCAGAGCATCTTTATTCTCAGGTTCGGCAGGAGGAAGGGGGAAAGTTGGT-GAA--AGAGGCATGCAGTTTAAAAGGGACATTGCGTGAAGAAACc-aaggtttcttattgtccacactgttaacgttttgaggctagatcactgcttgctggttaacatggtcctgtacgttgataggg-gtttggcaccatccctagcctccactgaccagaggccag----catcctcacagct-atgatgaccaaaagtgtctctgagaattagaaaatacttcctgaaatgc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=142638.000000 s hg38.chr19_GL949753v2_alt 716184 45 + 796479 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT s panTro4.chr19 59917899 45 + 63644993 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815113 45 + 60714840 aaagttttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358928 45 - 106955855 GAAGTTTTCTTAGGTTGAGAGCCATTGTAATCTAGCCCCATCTTT i nomLeu3.chr10 I 115 C 0 s rheMac3.chr19 60653027 45 + 64156825 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793903 45 + 59248254 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901058 45 + 51301725 AACATTTTCTTAGGTTGAGAACCATTGTAATCTAGCCCCATCTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605657 45 + 50890351 aaaattttcttaggttgagaaccattgTAATCTAGCCCCATCTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10564 45 + 138250 aaaatttccttaggttgtgaaccattgTGATCTAGCCCCATCTTT i calJac3.chr22_GL285922_random C 0 I 288 e canFam3.chr1 20065152 1307 - 122678785 I a score=800544.000000 s hg38.chr19_GL949753v2_alt 716229 349 + 796479 AGAGAAG-AAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATCGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATGACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC s panTro4.chr19 59917944 350 + 63644993 AGAGAAGAAAATTGAGTAACGGATCTACATCCATTGAGGAAC--TATGGACACCCCAGGGGCCCATGAAATGTAAACTCGCACTCACAATTAACCATCTTTCTCCAACGTGTGTATTTCATGTAGCCACACTCTCAGATGCCCACCCCCATTACCTACAAGTCCTAAACAGGGAAACCTGTGGCACATGGGTTC----ATGTGTGTCTGAATCTATA--CGTTCAGAGATGAACAAGTACTGCTCTCCCTA----------------TACCTGTGACCGCTCGCCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCATTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815158 364 + 60714840 AGAGAAG-AAATTGAGTAACGTATCTACATACATTTAGGAAC--TATTGACACCCTAGGGGCCCATAAAATGTAAACTTGTACTCATAATTAACCATCTTTCTCCAACGTGTGTATTTCATCTAGCCATACTCTCAGATGCCCACCCTCATGACCTA-AAGTCCTAAACAGTGAAACCTGTGGCACATGGGCTC----ATGTGTGTCTGAATCTATA--TGTTCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCTCCTTACCTGTGACCACTCACCTCCGCCCATCACTGAATTCTGAAAATGTGGCCTCAGGCTCACAGCAGCTTTAGCACTTGCTTGCTCTGGATCTCATCACATTGATGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103358973 362 - 106955855 AGAGAAG-AAATTGAGTAAC--ATCTACATCCATTTAGGAAC--TATTGACACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTCACCATCTTTCTCCAATGTGTGTGTTTCATCTAGCCATACTCTCAGATGCCTACCCTCATGACCGACAAGTCCTAAACAGTGAAACCTGTGGCACGTGGTTTC-----TGTGTGTCTGAATCTGTA--TGTTCAGAGATGAACAAGTACTGCTGTCCCTATTTTCTTGCACCTCCTTACCTGTGACCACTCGCCTCCGCCCATCACTGAATTCTGAAAGTGTGGCCTCAGGCTCACAGCAGCATTAGCGTCTGCTTGCTCTGGATCTTATCACACTGATGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653072 317 + 64156825 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAATGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55793948 317 + 59248254 ACAGAAG-AAATTGAGTAATGTATCCACATCCATTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCC--GTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901103 319 + 51301725 ACAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACTGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCATAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCAAGCTCTCAGATGCCTACCCTCATGACCTACAAGTACTAAACAGTGAAACCTGTGGCACATGGGTTCATTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACTGCTGTCCCTGTTTCCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47605702 313 + 50890351 CCAGAAG-AAATTGAGTAATGTATCTACATCCGTTTAGGAACGGTATTGATACCCCAGGGGCCCATAAAATGTAAACTTGCACTCGTAATTAACCATCTTTCTCCAACGTGTGTACTTCATCTAGCCATGCTCTTAGATGCCTACCCTCACGACCTACAAGTAC------GTGAAATCTGTGGCACATGGGTTCGTTCATGTGTGTCTGAATCTAT----GTCCAGAGATGAACAAGTACCGCTGTCCCTGTTTTCTTGCACCT---CACCTGTGACCACTCGCCTCTGCCCATCACTGAAT-----------------------------------------------TCTGGATCTCATCACATTGATGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 10897 337 + 138250 aaggaag-aaaTTGAGTAATGTATGCACATTCGTTTAGGAACTGTATTGACACACCAGGGGTCCATAAAATGTAACCGTGCACTCATAATTGACCATCTTTCTCCAACGTGTGTATTTCATCTGGCC----------------GCCCTCATGACAGGTAAGTACTGAAAACTGAAA--TGGAGCACATGGG----------------TGAATCTGTAGGTGTTCAGAGGTGAACAAGTGCTGCTGTCT--TGTTTCTCACACCTCCTTACCTGTGACCGCCCACCTCTGCCCACCACTGAgttctgaaaatgtggcctcaggctcacagcagcattagcaCTTGCTTGCTCTCGATCTCCTCACATTGATGATC i calJac3.chr22_GL285922_random I 288 I 316 e canFam3.chr1 20065152 1307 - 122678785 I a score=218854.000000 s hg38.chr19_GL949753v2_alt 716578 80 + 796479 AAGAACAAAGTATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA s panTro4.chr19 59918294 80 + 63644993 AAGAACAACGTATTCACTGGGTTCTCTGCTAAGGATCC-AAAAAAAACCATTCCACAATTCCACGGCCATGTTTGCACCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815522 80 + 60714840 AAGAACAAAGTATTCACTGGGTTCCCTGCTAAGGATAC-AAAAAAAACCATTCCACAATTCCATGGCCATGTTTGTACCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359335 80 - 106955855 GAGAAGAAAGCATTCACTGGGTTCTCTGCTAAGGATAC-AAAAAAAACCCTTCCACAGTTCCATGGCCATGTTTGCACCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653389 79 + 64156825 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794265 79 + 59248254 AAGAACAAAG--TTCACTGGGTTCTCTGCTAAGGATACAAAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901422 78 + 51301725 AAGAATGAAG--TTCACTGGGTTCTCTGCTaaggatac-aaaaaaaatcattccacAATTCCATGGCCATGTTTGCACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606015 76 + 50890351 AAGAACGAAG--TTCACTGGGTTCT---CTAAGGATACAGAAAAAAATCATTCCACAATTCCATGGCCATGTTTGCACCCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11550 80 + 138250 aagaacaaaGTATTCACTGGGTTCTCTGATAAGGATAC-AAAAAAAATCATTCCACAGTCCCATGGCCGTGTTTGCACCCA i calJac3.chr22_GL285922_random I 316 C 0 e canFam3.chr1 20065152 1307 - 122678785 I a score=194044.000000 s hg38.chr19_GL949753v2_alt 716658 68 + 796479 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA-------AAGAGC s panTro4.chr19 59918374 70 + 63644993 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTT-CTGGAGC--AAAAAA----AATAAGAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815602 71 + 60714840 GGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AATGTTCCTGGAGC--AAAAAA----AATAAGAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359415 75 - 106955855 GGAACCACGAGGGCTGGGTTAGCCCAGATGATGGGCTCGGGA-AATGTTCCCGGAAC--AAAAAAAAACAATAAGAGC i nomLeu3.chr10 C 0 I 167 s rheMac3.chr19 60653468 63 + 64156825 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCTTGGAGC-------A-------AAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55794344 68 + 59248254 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCCTGGAGC--AAAAAA-------AAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901500 70 + 51301725 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGCTTGGGA-AGTGTTCctggagcaaaaaaaa-------aagagc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606091 70 + 50890351 CGAACCACGAGGGCTGGGTTAGCCCAGATGGTGGGTTTGGGA-AGTGTTCCTGGAGCAAAAAAAA-------AAGAGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11630 69 + 138250 GAAACCACAAGGGCTGCGTTAGCCCAGGTGGTGGGTTTGGGCTAATGTT-CTGGAGC--AAAAAA------GCAGAAC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786277 66 + 122678785 GGGATCACAGAGCCTGGCTCAGCCCAGATGGTGGGTTTGGGG-AGGGTCCCTGGAAG--GAAACA-------GAGG-- i canFam3.chr1 n 1307 C 0 a score=32493.000000 s hg38.chr19_GL949753v2_alt 716726 10 + 796479 CAGAAGTCAT s panTro4.chr19 59918444 10 + 63644993 CAGAGGTCAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815673 10 + 60714840 CAGAGGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359657 10 - 106955855 CAGAGGTCAT i nomLeu3.chr10 I 167 C 0 s rheMac3.chr19 60653531 10 + 64156825 CAGAGGTCAT i rheMac3.chr19 C 0 I 113 s macFas5.chr19 55794412 10 + 59248254 CAGAGGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901570 10 + 51301725 cagaggTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606161 10 + 50890351 CAGAGGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11699 10 + 138250 CGGAGATCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786343 9 + 122678785 -CTGGGTCAC i canFam3.chr1 C 0 C 0 a score=521908.000000 s hg38.chr19_GL949753v2_alt 716736 220 + 796479 GAGAGCCTGACCCCCTCC----CCCAACGCG--------------------------------------CACACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTTTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAGATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTGCTTT s panTro4.chr19 59918454 255 + 63644993 GAGAGCCTGACCCCCTCC----CCCAACGCGGGCGCGCGcacacacacacacacacacacacacacacacacacacacacacCACTCTCTACCTCCAAGCCACATTTTCAGGCTT------------AAAGCTAAGGTCACTCCCATGAGCTAAGCCGTGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CTCTCCTGT-----TCAAAATCCTGTGGCTCAGCTGCAGCTCTGGAAGAAAGACCCCGGTGAGGGTC-TTTCTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815683 227 + 60714840 GAGAGCCTGATCCCTTCC----CCCAATGCG----------------------------------------CACACACACACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTTTTCAGGCTTCTCAAAGCTAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAATCCTCAGCTCTTCCACAAGAATAGGAAGAACT------------------CCCTCCTGT-----TCAAGATCCTCTGCCTCAGCTGCAGCTCTGGAAGAAAGACCCCAGTGAGGGTC-TTTCTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103359667 240 - 106955855 GAGAGTCTGACCCCCTCC----CCCAATGCG------------------CGcacacacacacacacacacacacacacacCCCACTCGCTACCTCCAAGCCTCATTTTCAGGCTT---------CTTAAAGCCAAGGTCACTCCCATGAGCTAAGCCGCGC---TTCTCTCAGTCCTCAGCTCTTCCACCAGAATACGAAGACCT------------------CTCTGCTGT-----TGAAGATCCTCTGGCTCAGCTGCAGCTCTGGAGGAAAGACCCCGGTGACGGTC-TTTCTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60653654 214 + 64156825 GAGAGCCTGATCCCCTCC----CTCAACACA--------------------------------------CACACACACACACCACT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGATCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i rheMac3.chr19 I 113 C 0 s macFas5.chr19 55794422 214 + 59248254 GAGAGCCTGATCCCCTCC----CTCAacaca--------------------------------------cacacacacacaccacT--TTACATCCAAGTCTCATTTTCAGGCTT---------TTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAACTCTTCCACGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCAGTGAGGGT-----CTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47901580 208 + 51301725 GAGAGCCTGATcccctc----------aaaa--------------------------------------cacacacacacaccact--ctaCATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCCGGC---TTCTCTCAATCCTCAGCTCTTCCACGAGAACAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606171 208 + 50890351 GAGAGCCTGATCCCCTCC----CTCA----A--------------------------------------CACACACACACACCACT--CTACATCCAAGTCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCACTCCCATGAGCTACGCCGGGC-----CTCTCAATTCTCAGCTCTTCCATGAGAATAGGAAGAACT------------------CTCTGCTGT-----TCGAGATCCTCTGGCTCAGCCGCAGCTCTGGAAGAAAGACCTCGGTGAGGGT-----CTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 11709 217 + 138250 GAGAGCCTGACCCCCTCC----CACA----G--------------------------------------CACATACGCATACCACTCTCTACCTCCAAGCCTCATTTTCAGGCTT---------CTCAAAGCTAAGGTCAATCCCATGAGTTAAGGTGCAC---GTTGCTCAATCCACAGCTGTTCCACAAGAATAGAAAGAACT------------------CTCTCCTGT-----TCAAGACCCTCTGGCACAGCCACAGCTCTGGCAGACAGACTTCGGTGAGGGTCATCCATTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 102786352 224 + 122678785 AAGGTCCTCTCCACCCTCAGTTCCCAACTCA--------------------------------------GCCCCAAACACCCAGAT--GTCCCCCC-----------TCTGTCAA---------CCCAGAGCT--GCTGATCTCCATCCCCCCTGCCTGGTGGGTATTCCCTGTCCCCAGT----------GAGGAGGTGGGACTGGGACCCCTGGGGACAGACTCACCTGCCTGCACTGAGTCCCTGGAGCCCACACTCAGCCCTGGAAGAGAGTCCCTATGAGAGGT--TTGCCCT i canFam3.chr1 C 0 n 0 a score=199254.000000 s hg38.chr19_GL949753v2_alt 716956 65 + 796479 TCACAATCCCCAATCCCAGACCACATCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCTT s panTro4.chr19 59918709 66 + 63644993 TCACAATCCCCAATCCCAGACCACATCCTGTGCCCCCAAAACAACTTCCATGGTAACCACATCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56815910 65 + 60714840 TCACAATCCCCAATCCCAGACCACATCCTGTA-CCCCAAAACAACTTCCATGGTAACCACGTCCTT i ponAbe2.chr19 C 0 I 113 s nomLeu3.chr10 103359907 65 - 106955855 TCACACTCCCCAATCCCAGACCACATCCTGCG-CCCCAAAACAACTTCCATGGTAACCACATCCTT i nomLeu3.chr10 C 0 I 109 s rheMac3.chr19 60653868 65 + 64156825 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i rheMac3.chr19 C 0 I 295 s macFas5.chr19 55794636 65 + 59248254 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i macFas5.chr19 C 0 I 97 s papAnu2.chr19 47901788 65 + 51301725 TCACAATCCCCAATCGCAGATCACATCCTGTG-CCCCAAAACAACTTCCATGGTCACCACATCCTT i papAnu2.chr19 C 0 I 97 s chlSab2.chr6 47606379 65 + 50890351 TCACAATCCCCAATCACAGATCACATCCTGTG-CCCGAAAACAACTTCCATGGTCACCACATCCTT i chlSab2.chr6 C 0 I 97 s calJac3.chr22_GL285922_random 11926 65 + 138250 TCACAATCCCCAATCCCAGACCACAGCCTGTG-CCCCAAAACAACTTCCATGGTAACCACATCCCT i calJac3.chr22_GL285922_random C 0 I 25 e canFam3.chr1 102786576 0 + 122678785 I a score=-2973.000000 s hg38.chr19_GL949753v2_alt 717021 5 + 796479 CAGGA--------------------------------------------- s panTro4.chr19 59918775 5 + 63644993 CAGGA--------------------------------------------- i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103360081 5 - 106955855 CAGGA--------------------------------------------- i nomLeu3.chr10 I 109 C 0 s calJac3.chr22_GL285922_random 12016 50 + 138250 CAGGCTTCTCGAGGCTTCCCCTACTCACCCAGACAGAGCAGTGTAGATCA i calJac3.chr22_GL285922_random I 25 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56815975 113 + 60714840 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=10270.000000 s hg38.chr19_GL949753v2_alt 717026 14 + 796479 AGTGAA-GTCAGGCA s panTro4.chr19 59918780 14 + 63644993 AGTGAA-GTCAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816088 14 + 60714840 AGTGAA-GTCAGGCA i ponAbe2.chr19 I 113 C 0 s nomLeu3.chr10 103360086 14 - 106955855 AGTGAA-GTCAGGCA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 12066 15 + 138250 AGTAAATGTCATGCA i calJac3.chr22_GL285922_random C 0 I 4 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47606444 97 + 50890351 I e papAnu2.chr19 47901853 97 + 51301725 I e macFas5.chr19 55794701 97 + 59248254 I e rheMac3.chr19 60653933 295 + 64156825 I a score=531889.000000 s hg38.chr19_GL949753v2_alt 717040 261 + 796479 GGAAGTCAAGTCAGAAGAC--GGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaataccaaaagtagccaggcttggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccggaaggcggaggttgcaatgagccgagat s panTro4.chr19 59918794 263 + 63644993 GGAAGTCAAGTCAGAAGACAGGGAATGggctgggcatggtggatcgcacctgtaatcccagcactttgggaggcagaggcaggtggatcacatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaagtagccaggcgtggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcgcttaaa--cccagaaggcggaggttgcaatgagccgagat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816102 261 + 60714840 GGAAGTAAAGTCAGAAGAC--GGAGTGggctgggcatggtggatcgcacctgtaatcccagcacttcgggaggcagaggcaggtggatcacataaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggagaatcagttaaa--cttggaaggcagaggttgcaatgagccgagat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360100 263 - 106955855 GAAATTAAAGTCAGAAGACAGGGAGTGggctgggcgtggtggatcgcacctgtaatcccagcattttgggaggcagaggcaggtggatcacgtgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaccaaaaatacaaaaactagccaggcgtggtggcgcatgcctgtaatcccagctactctggaggctgaggcaggaggattgcttaaa--cccggaaggtggaggttgcaacgaaccgagat i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55794798 254 + 59248254 GCAAGTAAAGTCGGAAGAC--GGGGTGggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggcggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatcagtcgggcgtggtggcgcatgcctgtagtcccagctactctggaggctgaggcaggagaatcgcttaaa--cccgggaggtggaggttgcagtgag------- i macFas5.chr19 I 97 C 0 s papAnu2.chr19 47901950 257 + 51301725 GCAAGTAAAGTCGGAAGACAGggagtgggctgggcacggtgaatcgcacctgtaatcccagcacttcgggaggtggaggcgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccaggcatgg-gacacatgcctgtagtcccagctactctggaggctgaggcgggagaatcgcttaaaaccccggaaggtggaggttgcagtgag------- i papAnu2.chr19 I 97 C 0 s chlSab2.chr6 47606541 254 + 50890351 GCAAGTAAAGTCGGAAGAC--GGAGTGggctgggcatggtgaatcgcacctgtaatcccagcacttcgggaggtggaggtgggtgtatcacatgaggtcaggagttcaagaccagcctggccaacataatcaaaccctgtctctactaaaaatacaaaaatcagccgggcgtagtgacacacgcctgtagtcccagctactctggaggctgaggcaggagaatcgcctaaa--ccccggaggtggaggttgcagtgag------- i chlSab2.chr6 I 97 C 0 s calJac3.chr22_GL285922_random 12085 234 + 138250 GCAAGTAAAGGCAG-------GAAGTG-----------------cacacctgtaatcccagcactttgggaggtggaggcgggtggatcacatgaggtcaagagtttgagaccagcctggtcaacattgtgaa--cccatctctactaaaaatac---atttagctgagcatggtagtgcatgtctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa--cctaggagatggaggctgcagtgagatgagat i calJac3.chr22_GL285922_random I 4 I 858 e canFam3.chr1 102786576 0 + 122678785 I e rheMac3.chr19 60653933 295 + 64156825 I a score=130651.000000 s hg38.chr19_GL949753v2_alt 717301 83 + 796479 cgcaccattgcactccagcccgggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg s panTro4.chr19 59919057 82 + 63644993 cgcaccattgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtgatctcagctacttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816363 82 + 60714840 cgcaccatcgcactccagcct-ggggacag------------------------------aAAAaaaaatgtagctgagcatggtagtgcacgtctgtaatctcatctacttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360363 84 - 106955855 cgcaccattgcactccagcct-ggggacagaa----------------------------aaaaaaaaatgtagctgagcatggtagtgcacgtctgtaatctcagctacttg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55795052 106 + 59248254 ----ccattgcactttagcctgggggacagaatgagactccgtctcaaaaaa---aaaagaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcggctacttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902207 109 + 51301725 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaaaaataaagaaaaaaaaaatgtagctgagCATGGTAttgcacgtctgtaatctcagctacttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606795 109 + 50890351 ----ccattgcacttcagcctgggggacagaatgagactccatctcaaaaagaaaaagaaaaaaaaaaaTGtagctgagcatggtattgcacgtctgtaatctcagctacttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I e rheMac3.chr19 60653933 295 + 64156825 I a score=1055079.000000 s hg38.chr19_GL949753v2_alt 717384 475 + 796479 ggagtctgaggcaggagaatcacttgaacccaggcggtggaggttgcagtgagccaagattgtaatagtccaatgtgttcaccttgcccactgcctagacagagctgattcgtcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagcg-------tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcgtgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaagtt-----aaacgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct s panTro4.chr19 59919139 473 + 63644993 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaatgtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctgtctctacgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagag-------tttttaaggataatttggtgggtgggtgggaagccagtgagccaggagtgctgtttggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcgctgatcttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatgactc-- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816445 477 + 60714840 ggagtctgaggcaggagaatcgcttgaacccagaaggcggaggttgcagtgagccaagattgtaattgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaataattcatgcagagctggctctatgagagaccagagttttattattattcaaatcagtgtctcccagcattcaggaagaagac----tttttaaggataacttggtgggtgggtgggaagtcagtgagccaggagtggtgattggtttgggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggacgccaaaagataagatgggccagtttattgatat-ggtggtcccagctgatccatcaagtacagggtctgcaaata-----aagcactgattatagaagcagtttagggagggtcacaatcttgtagcctccagatgcatgactcat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360447 478 - 106955855 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagattgtaatcgtccaaggtgttcaccttgcccactgcctagacagagctgattcatcaagaca-gggaatcgcaatagagaatagttcatgcagagctggctctacgagagaccagagctttattattattcaagtcagtgtctcccagcattcaggaagaagaa----tttttaaggataacttggtgggtgggtgggaagccagtgagccaggagtgctgattggtcagggatgaaatcatgggagccaaagctatcttcttgcac----tcagttcctgagtggaggccaaaagataagatgggccagtttattgatatgggtggtgccagctgatccatcaagtacagggtctgcaaatt-----aagcactgatcttagaggcagtttagggagggtcacaatcttgtagcctccagctgcatgactcct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654228 482 + 64156825 ggaggctgaggcaggagaatcgcttgaacccgggagggggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcaggtagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i rheMac3.chr19 I 295 C 0 s macFas5.chr19 55795158 482 + 59248254 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcatcaggacaggggagttgcattaagaaataattcatgcagagctggctctacgaaagaccagagtt---ttattactcaaatccgtgtctcccagcattcagggagaagag-ttgttttaagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcttctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902316 482 + 51301725 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatCACCCAAGgtgttcaccttgcccactgcctagacagagctgattcatCAGGACAGGGGAGTTGCATTAGAAAataattcatgcagagctggctctaccagagaccagagtt---ttattactcaaatccGTGTCTCCCAGCATTCAGGGAGAAGAG-ttttttttAGggataactt----ggtgggtgggAAGCCCGTGGGctaggagtgctgattggtcagggatgaaatAATGGGAGTCAAAGCTATCTTCTCGAACTCAGTCAGTTCCTGAGTGGAGGCCAAAAGATAAGATGGGCCAGTTTATTGAgatgggtggtgccagctgatccatcaagtgcaggttCTGCAAATTATCTCAAGCACTTACCTTAgaagcagtttagggagggtcacaATCttatagcctccagctgcatg--tcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47606904 474 + 50890351 ggagtctgaggcaggagaatcgcttgaacccaggaggtggaggttgccgtgagccaagattgtaatcacccaaggtgttcaccttgcccactgcctagacagagctgattcctcaggacaggggagttgcattagaaaa----tcatgcagagctggctctacgagagaccagag--------ttactcaaatcagtgtctcccagcattcagggagaagagtttttttttagggataactt----ggtgggtgggaagcccgtgggctaggagtgctgattggtcagggatgaaataatgggagtcaaagctatcctctcgaactcagtcagttcctgagtggaggccaaaagataagatgggccagtttattgagatgggtggtgccagctgatccatccagtgcaggttctgcaaattatctcaagcacttaccttagaagcagtttagggagggtcacaatcttgtagcctccagctgcatg--tcct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 12319 858 + 138250 I a score=859576.000000 s hg38.chr19_GL949753v2_alt 717859 311 + 796479 aagtcataatttctaatctcgtggctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtgtgctttggaaaagggctatcatctttgtttaaacta-----t-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggagacagagcgagaccctgtc------------aaa----aaaaaaaaaaaaaaacaagaaGTGA s panTro4.chr19 59919612 298 + 63644993 ------------------------ctaatgttcgtcctacagggccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttctttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaa-gacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggcgacagagcgagaccctgtca-----aaaaaaaaa----aaaaaaaaaaaaaaacaaGAAGTGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56816922 317 + 60714840 aaatcataatttctaatctcgtggctactgttcat-ctacagagccaatctagtccccaggcaacaaagaggtctcctttggaaaaggactatcatctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggcatgaaaaaggacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccctaggtgacagagcgagaccctgcc----------aaaaa----aaaaaaaaaaaaaaCCAAGAAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103360925 308 - 106955855 aaatcataatttctaatctcgtggctaatgttcatcctacagagccaatctagtccccaggcaacaaagaggtctgctttggaaaagggctatcgtctttgtttaaactataaact-------aagtttctcccaa----agttcagcctatgcccaggaatgaaaaaagacagcttggaggttagaagcaaaatggagtcagt-----taaatctctttcactgtctcagtcataattttggaaaggtggtttcaagctggcacaactgcactccaccttaggcgacagaacgagaccctgtc------------aaa----aaaaaaaa--------aagaaGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60654710 333 + 64156825 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagtaaaatggagtcagttaagataagtctctttcactgtctcagtcataattttgcaaaagtggtttcaAGCTGACACAactgcactccaccctgggcgacacagcgagaccctgtcaagaacaaaagaaca----aaaaaCAAAAAAAAACAAGAGGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795640 326 + 59248254 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagt-----taagtctctttccctg--tcagtcataattttgcaaaagtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaaTCAAGAGGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47902798 332 + 51301725 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaagaggtctgctttgggaaagggctatcGTCTTTGTTTAAAccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaAGCAAAATGAAGTCAGTTAAGTtaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagcgagaccctgtcaagaaaaaaagaaca----aaaaacaaaaaaaa-caagaggtGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607378 337 + 50890351 aaatcataatttctaatctcgtggctaatgttagtcctacagagccaatctagtccccaggcaacaaacaggtctgctttgggaaagggctatcgtctttgtttaaaccataaact-------aagtttctcccaa----agttcagcctacacccaggaatgaaaaaggacagcttggaggttacaagcaaaatggagtcagttaagttaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaagctgacacaactgcactccaccctgggcgacacagtgagaccctgtcaagaaaaacaaaacaaaacaaaaaaaaacaaaaaCAAGCGGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13177 329 + 138250 aaaccatgatttctaatcttgtggcta---ctagtcctacagtggcaatacagtccccaggcaagaaagaggtctgcttcgggaaagggctattgtctttgtttaaactataaactgcaaacgaagtttctccccaagttagttcagcccacgcccaggaatgaaaaaggacagcttggagtttagaagcaaaatggagtcagttaaattaaatctctttcactgtctcagtcataattttgcaaaggtggtttcaAgatcacataactgcacttcagcctgggtgacagaaccagaccctgac------------cca----aaaaaaaaaaaaaaaaaaaAAGCGG i calJac3.chr22_GL285922_random I 858 I 10 e canFam3.chr1 102786576 0 + 122678785 I a score=155058.000000 s hg38.chr19_GL949753v2_alt 718170 65 + 796479 AGTCAAGATAGGAGGTAAATTCGGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAAGTCATA s panTro4.chr19 59919910 57 + 63644993 AGTCAAGAT---AGGTAAATTCGGAAGACAGGAAGTGGTGGTAG-----AAGAAGTGAAGTCATA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817239 65 + 60714840 AGTCAAGATAGGAAGTAAAGTCCGAAGACAGGAAGTGGTGGTAGAAGACAAGAAGTGAGGTCATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361233 65 - 106955855 AGTCAAGATAGGAAGTAACATCGGAAGACAGGAAGTGCTGGTAGAAGACAAGAAGTGAGGTCATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655043 65 + 64156825 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55795966 65 + 59248254 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTGGAGGTAGAAGACTAGAAATGATGTCATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903130 65 + 51301725 AGTCAAGATAGGAAGGAAAGTCGGAAGACACCAAGTAGAGGTAGAAGACTAGAAATGATGTCATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607715 65 + 50890351 AGTCAAGATAGGAAGTAAAGTCGGAAGACACCAAGTGGCGGTAGAAGACTGGAAATGAGGTCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 13516 65 + 138250 AATCAAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTA i calJac3.chr22_GL285922_random I 10 T 75 e canFam3.chr1 102786576 0 + 122678785 I a score=1542446.000000 s hg38.chr19_GL949753v2_alt 718235 576 + 796479 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGATTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACGGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACCCACATCTCTCTGCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGGATTGAATGAC------TACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACTCATAGCTTTGCATTTCCACTCTGCATTACTTGTATTTTTATTATTTTGTGATATTCGTAATAAT---TTATTATAAAACTGTGTTATT--TTTGGATATTTTTAAGTTAAAATGCGATTTTTT s panTro4.chr19 59919967 582 + 63644993 CAGGAAGCAAAGTCAGATGACAGGAAGTGAAGTAAGAAGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACAGGAAGT-AAAATCAGAAGACAGGAAGTGACATCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCCGAAGTGAACAGGTAGCATCAGGTGTGCCATTTCAGTGACTGGGCACAGCCCAGGCACTCACATCTCTGTGCAGTGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGAGA-TCCTGAATTGAATGACTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAACACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTTATT--TTGGGATATTTTTAAGTTAAAATGCGATTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817304 557 + 60714840 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA--------------------AGAAGACAGGAAGTGAGATCATACAGGAAGTAAAAATCAGAAGACAGGAAGTGACGTCAAACCAGGA-TTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTAAGGGGAAC--GTCTT-----TCTCCTGCTCAGCCCGAAGTGAACAGGTGGCATCAGGTGTGCCATTTGAGTGACTGGGCGCAGCTCAGGCACCCACATCTCCCTTCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCGGAGATGAGA-TCCTGGATTGAATGACTTGAATTACTGTGGAAAGCGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TGTTAGCCGTCTAGCACACATAGCTTTGCATTTCCACTCTGCATTACTTGtatttttattattttgtaatatttgtaataat---ttattataaaaCTGTGTGATT--TTTGGATATTTTTAAGTTAAAATGCGGTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361298 581 - 106955855 CAGGAAGCAAAGTCAGAAGACAGGAAGTGAAGTA---AGACAGGAAGTGGTTGTAGAAGACAGGAAGTGAGGTCATACATCAAGT-AAAATCAGAAGACAGGAAGTGACGTCAAACCAGGACTTGCAGTC-GGAGGCAGGCAAGAAGTGAAATCAGAAGACAGGAAGTGGCTGAGGGGAAC--GTCTTTTCTCTCTCCTGCTCAGCCTGAAGTGAACAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTGGAACACCAGAGACCTCTACACTATTTTCTGTTGCTTTTTTCCTTCATTTTCAGAGATGATA-TCCTGGATTGAATGATTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGGTGTTGTTTGTTATGACT-------TATTAGCCGTCTAGCACACATAGCTTTGTATTTCCACTCTGCattacttgtatttttattattttgtaatatttgtaataatttattattatAAAACTGTGTTATT--TT-GGATATTTTTAAGTTAAAATGCGATTTTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655108 576 + 64156825 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATACTTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796031 576 + 59248254 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAACCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCACTATTTTCTGTTGTTTTTTTCCTTCATTTTCCGAGACGAGG-TCCTGGATTGAGTGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTGTCTTGTTCTTTAATTTTGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTAAAATGTGATTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903195 574 + 51301725 TAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTGAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAAGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCGGGAGGAACTTGTCTTTCCCCTCTCCTCCGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTGACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAACACCAGAGACCTCTGCactattttctgttgcttttttccttcattttccgaGATGAGG-TCCTAGCTTGAATGGCTTGAATTACCATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTgttctttaattttgttgttgtttgttatgACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCActacttgtatttttattattttgtagtatttgtaataatttgttattttaaaac--tgttattagtttgGATATTTTGAAGTTAAAATGCGATTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47607780 576 + 50890351 CAGGAAGTAAAGTCAGAAGACAGGAAGTGAAG--------------------GTAGAAGACAGGAAGTAAGGTCATACAGGAGGC-AAAGTCAGAAGACAGGAAGTGATGTCAATCCAGGAAGTGCAGTC-GAAGGTAGGCAAGAAGTGAAGTCAGGAGACAGAAAGTGGCCCGGAGGAACTTGTCTTTCCCCTCTCCTCTGAAGCCCCAAGTGAACAGGTAGCGTCAGGTGTGCCCTTTGAGTAACTGGGCACAGCTCAGGCACCCACATCTCCCTCCAGCGCCTATTCTTTGAGCACCAGAGACCTCTGCACTATTTTCTGTTGCTTTTTTCCTTCATTTTCCGAGATGAGG-TCCTGGATTGAATGGCTTGAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTATCTTGTTCTTTAATTCCGTTGTTGTTTGTTATGACTAATTGAATGTTAGCCTTCTAGCACACATAGCTTTGCATTTCCACTCTGCACTACTTGTATTTTTATTATTTTGTAGTATTTGTAATAATTTGTTATTTTAAAACTGTGTTATTAGTTTGGATATTTTGAAGTTGAAATGCGATTTTTT i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 13506 574 + 138250 CAGGAAGTGAAATC--AAGACAGGAAGTAAAGTCAGCAGACAGGAAGTGATGGGAGAAAACAGGAAGTGAGGTCGTACAGGTAGT-AAAGTCTGCAGACAGGAAGTGACGTTTACACCGGAAGTATTGTCAGAGGGCAGGCAGGAAGTGAAGTCAGAAGCCAAGAAGTGGCCAGGGAGAACTTGTCTTTCCCCTCTCCTCCTCAGCCCCAAGTGAAAAGGTAGCATCAGGTGTGCCATTTGAGTGACTGGACACAGCTCAGGCATCCACATCTCCCTTCAGC-------------CCATCAGAGACCTCTCCACTACCTTCTTTTGCTTTTTTCCTTCA-CTTCAGAGATGAAATTCCCAGATTGAACGGCTTCAATTACTATGGAAAGTGATTGACCAAGGTAAGTCACAACTACCTTGTTTTTTAATTATGTT----TTTGTTGTGACTAATTGAGTTTTAGCCTTTTAGCACACATAGCTTTGCATTTCCACTCTGCAGTACTTGCATTTTTATTACTTTGTAATGTTTGTAATGTG---TTATTATAAAGCTGTGTTATTGGTTTGG-CATTTTGAAGTTAAAATGTAATTTTTA i calJac3.chr22_GL285922_random T 75 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=9821.000000 s hg38.chr19_GL949753v2_alt 718811 6 + 796479 AACTAA--- s panTro4.chr19 59920549 6 + 63644993 AACTAA--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817861 6 + 60714840 AACTAA--- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361879 6 - 106955855 AACTAA--- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655684 6 + 64156825 AACTAA--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55796607 6 + 59248254 AACTAA--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47903769 6 + 51301725 AACTAA--- i papAnu2.chr19 C 0 I 1798 s calJac3.chr22_GL285922_random 14080 9 + 138250 AACTGCAAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=3893.000000 s hg38.chr19_GL949753v2_alt 718817 2 + 796479 GT s panTro4.chr19 59920555 2 + 63644993 GT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817867 2 + 60714840 GT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361885 2 - 106955855 GC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60655690 2 + 64156825 GT i rheMac3.chr19 C 0 I 845 s macFas5.chr19 55796613 2 + 59248254 GT i macFas5.chr19 C 0 I 976 s papAnu2.chr19 47905573 2 + 51301725 GC i papAnu2.chr19 I 1798 C 0 s calJac3.chr22_GL285922_random 14089 2 + 138250 GT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I a score=781.000000 s hg38.chr19_GL949753v2_alt 718819 1 + 796479 G s panTro4.chr19 59920557 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817869 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361887 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55797591 1 + 59248254 A i macFas5.chr19 I 976 C 0 s papAnu2.chr19 47905575 1 + 51301725 A i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14091 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e chlSab2.chr6 47608356 982 + 50890351 I e rheMac3.chr19 60655692 845 + 64156825 I a score=472153.000000 s hg38.chr19_GL949753v2_alt 718820 162 + 796479 GCAGTATGCAAAGCAAGTGGTTCAGAACTC-TCCCCCATTAATAAGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC s panTro4.chr19 59920558 162 + 63644993 GCAGTATGCAAAGCAAGTGTTTCAGAACTC-TCCCCCATCAATACGTCTTCTCTCCTGAAAGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACTTCTAAAAG-AAAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56817870 157 + 60714840 GCAGTATGCAAAGCAAGTGTTTCAGAACTCTTCCCCCATCAATAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTGAATTCTGTTTAACAGCATACTTCT-------AAAAGTGTATACTGTTATTATTTATTGTGTTACAAAAATATACAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103361888 162 - 106955855 GCAGTATGCAAAGCAAGTGTTTCAGAAGTC--TCCCCATCAATAAATTTTCTCTCCTGAAGGAAACAATTTTGAAACTTCCTGTTCTTAATTCTGTGTAACAGCATACTTCTAAAAGAAAAAAGTGTATACTGTCATTATTTATTGTGTTACAAAAATATACAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60656537 162 + 64156825 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i rheMac3.chr19 I 845 C 0 s macFas5.chr19 55797592 162 + 59248254 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCGTCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCATACGTCTAAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905576 162 + 51301725 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAATCTTCTCTCCTGAAGGAAACAATTTTGAGACTTCCTGTTCTTAATTCTGTTTAACAGCatacttctaaaag-aaaagatgtatactattattatttattgtgttataaaaatatacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609338 162 + 50890351 GCAGTATGCAAAGCAGGTGTTTCAGAACTC-TCTCCCATCAGTAAGTCTTCTCTCCTGAAGGAAACAATTTTGAGACTGCCTGTTCTTAATTCTGTTTAACAGCATACGTCTTAAAG-AAAAGATGTATACTGTTATTAtttattgtgttacaaaaatatacac i chlSab2.chr6 I 982 C 0 s calJac3.chr22_GL285922_random 14092 162 + 138250 GCAGTATGCAAAGCAAGTGTTTGAGAACTT-TCCCCCATCAATAAGTCTTCTCCCCTAAAGGAAACAGTTTTGAAACTTCCTGTTCTTAATTCTGTTTAACAGCTTACTTCTAAAAG-AAAACGTGTATGCTGTTATTAtttattttgttacaaaaatatacat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I a score=845.000000 s hg38.chr19_GL949753v2_alt 718982 1 + 796479 G s panTro4.chr19 59920720 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818027 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362050 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47905738 1 + 51301725 a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609500 1 + 50890351 g i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=4820.000000 s hg38.chr19_GL949753v2_alt 718983 5 + 796479 CACCT s panTro4.chr19 59920721 5 + 63644993 CACCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818028 5 + 60714840 CACCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362051 5 - 106955855 CACCT i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47609501 5 + 50890351 cacct i chlSab2.chr6 C 0 I 422 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=177412.000000 s hg38.chr19_GL949753v2_alt 718988 340 + 796479 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtctgacaagagagtcagcgaagggggataggggtggggccgttttataggatgtgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtcggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgcttcttttgtggtggaatgtcatcagttaaggcacgaac s panTro4.chr19 59920726 338 + 63644993 Ttcatgcacgtccgtgtgaagagaccaccaaacagactttgtgtgagcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcagcgaagggggac--gggtggggccattttataggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcataaggtgctcagtaggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcgctttttttgtggtggaatgtcgtcagttaaggcaggaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56818033 339 + 60714840 Ttcatgcacgtccgtgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcacctgggtgtaggcaggctgagtccgaaaagagagtcagcgaagggagat-ggggtggggccgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcgggcagagtgggggtcacaaggtgctcagtgggggagcttttgagccagga-tgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggCAGGAAC i ponAbe2.chr19 C 0 I 48100 s nomLeu3.chr10 103362056 337 - 106955855 Ttcatgcgcgtccgtgtgaagagaccaccaaacaggctttgtgtgggcaataaagcttttaatcacctgggtgcaggtgggctgagtccgaaaagagagtcatctaagggagat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaaggggg---gttctctggcgggcagagtgggggtcacaaggtactcagtaggggagcttttgagccaggattgagccaggagaaggaatttcacaagacaatgtcatcagttaaggcaggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaac i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=73474.000000 s hg38.chr19_GL949753v2_alt 719328 293 + 796479 cggccatctggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcaaaaatttttggggg-tggtatggagagataatgggtgatgtttctcaaggctgctttgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggggtgacattgtgggattgttaaaagaaacattt s panTro4.chr19 59921064 294 + 63644993 cggccatctggttgtgtacgtgcaggccacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaatgaaataggggtaaagtgttgggacagcgaaaatttttgggggatggtatggagagataatgggcgatgtttctcagggctgcttcgagcaggattaggggcggcgtgggaacctaaagtgggagcgattaagctgaaggaagattttgtggtaaggcgtgatattgtggggctgttagaagaaacattt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103362393 291 - 106955855 cggccatctggatgtgtacttgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgacattcctgtcttcttatattaataagaaaaataaaacgaaatagtggtaaagtgttgggacggcaaaaattttgggcgg-tggtatggagagataatgggagatgtttctcagggcttcttcgagtgggattaggggcggcgtgcgaacct-gagtgggagcgattaagctgaaggaagattttgtggtaaggggtgatattgtgggactgtta-aagaaacattt i nomLeu3.chr10 C 0 I 100 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=153925.000000 s hg38.chr19_GL949753v2_alt 719621 1768 + 796479 gtcatttagaattattggtgatggcctggatacagttttgtatgaattgaaaaactaaagggaataaggaaaggagaaaaacaggtattaaaggtctaagaattgggacgactcaggacatctaattagaaagtgcctaaggaggttcagcatagccttgccagcaaagat-tatttatttattttaagagttaacagtggcggtatggggatagtaccaggagataccagctgtgctggcttggagaaacagtgtaaactggcagtgtaaacaagagcagggcatgtgtgagtagttgagaacggtgaataggagtatgactagacagaagatagtagggatgacaagttttttggggcacaatctaagtTggtctggtgtctggaatgagactggggcctaataaaaaggagtgtctacacaggagcttaaatgggctgtatcttgtagcattccaaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttagcagactgtatagaggtgggaaggctgaactgaggaattttgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccctgtaggaaaggactgtacttacccagtgaaagtgtctacctagactaagaggtattttagttatcttactcggggcatgttgagtaaagctaatttgccagtcctgggcgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccatgaggagtagtagaatagctgatgcaacactgagaagtgatttctttgaggatagatttccacaatggaaaggaaatgagaggttctaagaggctggctagtggcttgtaCcatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccgccatcaataaactaagtgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaacgtcaggtggatcagagagatgcagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagattgaagtccgggccaggaacaatggtaattgtgggacttaacaaagagtgagtacagctgaaggagccagggagcagaaagtatatgcatcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagggcctctaaaagtattaaagcagcggcagccacagcacgcagatatgagggctaggctaaaacagtaaggtcaagttgtttggacagaaaggctacagggtgtggtcctggctcttgtgtaagagttctgaccgcgctaaccatgcctaggaaggaaaggagttgttgttttgtagaaggtgctggggcttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccgagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaaaccttgcagcagtacagcccaggtaatttgctgagcctaatgggtgtcagggtcagtccaagtgaa s panTro4.chr19 59921358 1753 + 63644993 gtcatttagaattattggtgatggcctggatgcagttttgtacgaattgaaaaactaaatggaataagagaaggtgaaaaacaggcattaaaagtctaagaattgggaggacctaggacatctaattagagagtgcctaaggaggttcagcatagtcctgccagcaaagatgtatttatttattttaagagttaagagtggcggtttggggatagtaccaggagatatcagctgtgctggcctggagaaa-------------cagtgtaaacaagagcagggcatgtgtgagtagttgataacagtgaataggagtatgactagacagaagataggagggatgacaagttttttggggcacagtctaagtTGGTTtggtgtctggaatgagactggggcctaataaaaaggagtgtctatacaggagcttaaatgggctgtatcttgtagcattccgaggacaggcctgaattctggaagcgaaaatggtaaaagtattgtccagtcctttttaagttggtggctgagcttggtgaggtgtgtttttaatagaccattagtctgtcactgaatactaagagcctgaaaaaatgcttggctgatttgactaataaaggctggtctgttatcagactgtatagaggtgggaaggctgaactgaggaattatgtctgacagaagggaatgacaaggctaaactgaagaattatgtctgacagaagggaagaaatgactgcggtggccttctcagaccccataggaaaggactgtacttatccagtgaaagtgtctacctagactaagaggtattttagttatcttactcgaggcatgttgagtaaagctaatttgccagtcctgggtgggggcaaatccttgagcttgatgtgtagggaagggagggggcctgaataatccctgaggagtagtagaatagcagatggaacactgagaagtgatttctttgacgatagatttccacgatggaaaggaaatgagaggttctaagaggcgggctagtggcttgtaCTatagcatagcctgcctttgctggtgtgtggcgattaggcctggtggaaccaccatcaataaatcaagcgtgatcagggtgagaaacagggaagaaggaaatgtggggaaatggggtgaatgtcaggtggatcagagagatatagtcatgggggtcaggtgtggtatctggaataatgtgggaggccagactgaggtccggggcaggaacagtggtaattgtgggacttaacaaagagtgagtacagctgaaggagccggggagcagaaagtatatgcgtcaggtgtgagtaagaaaatagattttggaaattatgagagctgtagagagtgagttgagcatagtttgtgattttgagagcctctaaaagtattaaagcaccggcagctgctgctcacagacatgagggctagcctaaaacagtaaggtcaagttgtttggacagaaaggctatagggtgtggtcctggcttttgtgtaagaattccgaccgcgctaaccatgcctaggaaggaaagga---gttgttttgtagaaggtgctggggtttgagagatcagtcagacacgatcagcagggagagcacgtgtgtttttatgagaattatgccaagataggtaacagatgaggatgaactttgggcttgactgaagtaatgggggctgtctgtgaagccttgcagcagtacagcccaggtaatttggtgagcttaaagggtgtcagggtcagtccaagtgaa i panTro4.chr19 C 0 I 10 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=0.000000 s hg38.chr19_GL949753v2_alt 721389 913 + 796479 agcgaagagaggctgggacgaggggtgcaggggaatagtgaaaaaagcatctttaagatcaagcatggaatagtgagttgtggaggaaggtattgaggacaaaagagtgtaggggttgggcaccacagggtgcataggcaaaacaatttgataaggcgcagatcctgaactaatctgtaagacttttccggtttttggacaggtaaaatgggggaattgtaaggagagtttataggttttagaagcccatgctatagcaggcgagtgataacaggctttaatccttttaaagtgtgctgtgggatgggatattggcattgagcagggtaagggtgattaggttttaatgggatggtaacgggtatgtgatcagttgccagggaaggagtagagatgtcccatacttgtgggttaaggtgggggaataggagaggaagacgcgaaggaggctttgggttgaggagaagggtggcaatgagatgcggctgtagtccaggaatagtcagggaagcagataatttggttaaaatatctcggcctaataagggaactgggcaggtggggataactaaaaaagagtgcataaaagagtgttgtccaagttggcaccagagtgggggagttttcaggggtttagaagcctggccgtcaatacccacaacagttatggaggcaagagaaacaggcccttgaaaagaaggtaatgtggagtgggtagcctccgtattgactaaggcgacggacttaccttccaccgtgagtgttacccgaagctcggcatccgtgatggtctacagagcttccgaggcgattgggcagcatcagtcttcagccgctaagccgagaaggagtcagagagccttgggccagagttccaggggctctgggagtggctgccaggtgagttgaacag e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56818372 48100 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=13937.000000 s hg38.chr19_GL949753v2_alt 722302 154 + 796479 tccgatttccagtggggtcccgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttggcctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccgctgcggttcag s ponAbe2.chr19 56866472 153 + 60714840 tccgatttccagtggggtcctgcacagatgggacacggcttaggaggaatcctgggctgcaggcattccttg-cctggtggtcagatttctggcacttgtagcaagctcctgggggaggaggttctggaggaacgcctggccactgcggtttag i ponAbe2.chr19 I 48100 I 11 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=0.000000 s hg38.chr19_GL949753v2_alt 722456 5 + 796479 ttccc e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56866625 11 + 60714840 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=163881.000000 s hg38.chr19_GL949753v2_alt 722461 1997 + 796479 ttcttgtgtgctggagatgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggcgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttt-ggagttttatttaatgtcgggagcagattgggtaataaaatgtgtattaagaataagacggccttttgacttttaagggtctagggctgtaaagcttctcagggttgctggcgaacgagccatgaattgggctggatttttatatttgatgaaaaagagcctaaacactatctgatttgggataaagaaaaaggagcattaaccttgactatgcctttagctccagccacctttctaagagtaaattgctgggcaggtggaagagggctagtcactgaacgaaactgtaagctggaccaggtgtggggaggggaggtgataaaaagataatacggtggaggagcggaggctgaggaagaattgggacctagctcagcctggggaggaggg-agaggtcagacgggtctgtagaaaaggaagattagaaagactcagcgacgcttggggttgagactgaggggacaggcaggagggaaagaaggaagatttgggacgagttgcactgggcacagagactaggaagggactgatgtgtaaaagaatgcctggacgtcaggcacctcagaccgtttgcccattttacgacaagaattatttagatcttgcaggatggaaaaattgaaagtgctgttttctggctatttggaactgctgtccagtttgtattggggtcaagcggcattgcagaagaaaataaggcatttaggttttaggtcaggtgtgagttgaagaggttttaagtttttgagaacacaggccaagggagagaaggaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcctagagaaaagagagagtagagacacggagggaaggggttcgggagttcttaccttccagaaaagcgggaaaggggttgg-------------------ggcatggatataaggggttggggcacagagataagaggttggggcatggaaataagggatcagggtgcagagata-------------------------------------------cgaggttggggtacttgcccctc---tagaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacatggagaggaggggttggggaacttgccccttccccagaaaagtgggacttgccactaagggtgaaggaccaaggcaggcatccctgcgtgatctgacacctctgaagcgtgggtatataatcagagaggcgtccctgcaatgattaaacgccaagggaaggctgccttccctagtccgtgaccggcgccggagttttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggtcgcttacccaatttaaacttggtgagatgttccttgggctggtgggtctgaggacctgaggtcgtaggtggatctttttcacagagcaaagagcaaga---caggggattgatctcccaagggaggtcccccgatccaagtcacggcaccaaaTTtcatgtgcgtccatgtgaagagaccaccaaacaggctttgtgtgagcaataaagcttttaat--cacctgggtgcaggtgggctgagtccgacaagagagtcagcgaagggggat-ggggtggggccgttttataggatttgggtaggtaaaggaaaattacagtcaaagcggggttgttctctggcgggcagagtgggggtcacaaggtgctctgtaggggagcttttgagccaggatgagccaggagaaggaatttcacaagacaatgtcatcagttaaggca s ponAbe2.chr19 56866636 2059 + 60714840 ttcttgtgtgctggaggtgtggctggggtttgtctcacagtggaggcaaggaattgcaacttttttctattattgtacaccttgaaggtgaggttaattaaatcctgttgtggggtttgagggccggaatttaattttttggagttttatttaatgtcgggagcagattgggtaataaaatgtattttgagaataagacggccttttgaccttttagggtctagggctgtaaag--tgtcagggttgctgccgaacaagtcatgaactgggctggatttttatatttgatgaaaaagagcctaaacgctatctgatttgggataaagaaaaaggagcatgaaccttgactatgcctttagctctagccacctttttaagagtaaattgctgggcaggtgggggagggctagtcacagaacgaaac------ccggacccggtgtgaggaggggaggtgataaaatgattatagggtggaggagcagaggctgaggaagaagtgggacctacctcagcctggcaaggaggggagaggtcagatggatctgtagaaaaggaagattagaaagactcagcgacgcttggggttgggactgaggggacaggcgggagggaaagaaggaagatttgggacgagttgcgctgggcacagagactagggagggactcatatgtaaaagaatgcctggacatcaggcatctcagactgtttgcccattttacgacaagaattatttacatcttgcaggatggaaaaattgaaagtgtcattttccggctatttggaactactgtcaggtttgtattggggttaagcggcgttgcagaagaaaataaggcatttaggttttaggacaggtgtgacttgaagaggttttaagtttttgagaacacaggccaagggaga--agaaggaggaatggagggtggaaggttgcccatagtgaaggaggcaagcacagagaaaagagagagtagagacacggagggaaggggtttgggggttcttaccctccagaaaagcaggaaaggggttggtgcagagataagaggtcggggcacggaaataagggattggggcacagagataagaggttggggcatggaaataagggattggggtgcagagatataagaggttggggcacggaaataagggattggggcacgagatacgaggttggggtacttgtccctcctgtggaaaagcgggacttgccgctaagagtgaaggagaaggggttgggggtttcttgccccccagaaaggtggagaaggggtagagacacggagagaaggggctggggtacttgccctttccccagaaaagcgggacttgccgctaagggtgaaggaccaaggcaggcatccctgcgtggtctgatgcctctgaaacctgggtgaataatcagagaggcgtccctgcagtgattaaacaccaagggaaggctgccttccc-agtccgtgaccggcgccggaggtttgggtccacagataaaacgtgtctcctttgtctctaccagaaaatgaaaggaattgaaattaagagaagggagagattgaagagtggaaaggagaaagtggttgagggacagtgagagaggttggagaagagagtaagaagaggccgcttacctaatttaaacttggtgagatgtttcttgggctgataggtctgaggacccgaggtcgtaggtggatctttttcacggagcaaagagcaggaggacaggggattgatctcccaagggaggtcccccgatccgagtcacggcaccaaaTTtcatgtgtgtccatgtgaagagaccaccaaacaggctttgtgtgagcaacaaggctgtttatttcacctgggggcaggcaggctgagtccaaaaagagagtcagcgaagggagataggggtggggctgttttatgggatttgggtaggtaaaggaaaattacagtcaaaggggggttgttctctggcaggcagagtgggggtcacaaggtacccagtgggggagcttttgagcaacgatgagccaggagaagggatttggcgagagaatggcatcagttaaggca i ponAbe2.chr19 I 11 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C e panTro4.chr19 59923111 10 + 63644993 I a score=33411.000000 s hg38.chr19_GL949753v2_alt 724458 126 + 796479 gtaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccagccatatggatgtgtacgtgcaggtcacaggggatatgatggcttagcttgggctcagaggcctgaca s panTro4.chr19 59923121 126 + 63644993 GTAACaggccattttcccttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatatggatgtgtatgtgcaggtcacagggtatatgatggcttagcttgggctcagaggcctgaca i panTro4.chr19 I 10 C 0 s ponAbe2.chr19 56868695 126 + 60714840 ggaacaggccattttcacttcttttgtggtggaatgtcatcagttaaggcaggaaccggccatctggatgtgtacatgcaggccacaggggatatgatggcttagcttgggctcagaggcctgaca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14254 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C e macFas5.chr19 55797754 0 + 59248254 C e rheMac3.chr19 60656699 0 + 64156825 C a score=1500.000000 s hg38.chr19_GL949753v2_alt 724584 1 + 796479 G s panTro4.chr19 59923247 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868821 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656699 1 + 64156825 g i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797754 1 + 59248254 g i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14254 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I e papAnu2.chr19 47905739 0 + 51301725 C a score=172329.000000 s hg38.chr19_GL949753v2_alt 724585 101 + 796479 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGGC-TGACTAACCATCTCCTCCATTGCTCCGCCTAAGAGACACCCACTTT s panTro4.chr19 59923248 101 + 63644993 cacctacctaaaaaattccaatagcactaaaagggtgtgtacaaaatgcagtggc-tgactaatcatctcctccattgctccgcctaagagacacccacttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868822 101 + 60714840 CACCTACCTAAAAAATTCCAATAGCACTAAAAGGGTGTGTACAAAATGCAGTGAC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656700 102 + 64156825 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccacctaagagacacccacttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797755 102 + 59248254 cacctccttaaaaaattccaatagcactaaaagggtgtgtacaaaatgcaatggcttaaccaaccgtctcttccattgctccgcctaagagacacccacttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905739 101 + 51301725 cacctgCTTAAAAAATTCCAATAGCACTAAAAGGGTTTGTACAAAATGCAATGGC-TAACCAACCGTCTCTTCCATTGCTCCGCCTAAGAGACACCCACTTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 14255 97 + 138250 catctactttaaaattttcaatagcactaaaagggtatgtacaaaatgcaatggc-taaccaaccatctcttccattgct----ctaagagacacccacttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47609506 422 + 50890351 I a score=393349.000000 s hg38.chr19_GL949753v2_alt 724686 176 + 796479 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAACATGTAACCATGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCGGGGCCTTAGTTATTCTACAGCGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATCTCTATGTCTGCATATCAACATT s panTro4.chr19 59923349 176 + 63644993 tagctgttttctttaggaacttgttaatattaggttgctaaaaacatgtaaccatgtg---aatgagcttagacttactggattcctatcataataggcggggacttagttattctacagtgttgttcttactg----ttttttctcttccaatgtttatctctatgtctgcatatcaacatt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56868923 176 + 60714840 TATCTGTTTTCTTTAGGAACTTGTTAATATTAGGTTTCTAAAAATGTGTAACCGTGTG---AATGAGCTTAGACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTCTTCCAATGTTTATGTCTATGTCTGCATATCAACATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656802 173 + 64156825 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTTTCCAATGTTTATGTCTACGTCTGCACATCAATATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55797857 173 + 59248254 tagctgttTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAG---TGTTCTTACTG----TTTTTTCTTttccaatgtttatgtctacgtctgcacatcaatatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47905840 176 + 51301725 TAGCTGTTTTCTTTAGGAACTTGTTAATATTAGATTTCTAAAAATGTGTAACCATGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTCGTTCTTCTACAGTGTTGttcttactg----ttttttcttttccaatgttTATGTCTACGTCTGCACATCAATATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47609928 176 + 50890351 TAGCTGTTTTCTTGAGGAACTTGTTAATATTAGATTTCTAAAACTGTGTAACCGTGTG---AATGAGCTTACACTTACTGGATTCCTATCATAATAGGCAGGGACTTAGTTCTTCTACAGTGTTGTTCTTACTG----TTTTTTCTTTTCCAATGTTTCTGTCTACGTCTGCACGtcaatatt i chlSab2.chr6 I 422 C 0 s calJac3.chr22_GL285922_random 14352 182 + 138250 tggctgttttcgttagg-tctttttaatattaggtttctaaaaatgtgTAACCATGTGAATAATGAACTTAGACTTACTAGATTCCTATCATAATAGGTGGGGACTTTGTTCTCCTACAGTGTTGTTCTTACTGTTTTTTTTTTCTCTTTCAATGTTTATGTCTACGTCTGCATATCAGTACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=50167.000000 s hg38.chr19_GL949753v2_alt 724862 35 + 796479 CAGTATCACAtttttttttt-------ttgagacagagtctc s panTro4.chr19 59923525 33 + 63644993 cagtatcacatttttttttt---------gagacagagtctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869099 41 + 60714840 CAGTATCACttttttttttttt-ttttttgagacagagtctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60656975 42 + 64156825 CAGTATCACttttttttttttttttttttgagacagagtctt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798030 37 + 59248254 cagtatccc-----tttttttttttttttgagacagagtctt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906016 42 + 51301725 cagtatcacttttttttttttttttttttgagacggagtctc i papAnu2.chr19 C 0 I 299 s chlSab2.chr6 47610104 40 + 50890351 cagtatcac--tttttttttttcttttttgagacagagtctt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=460204.000000 s hg38.chr19_GL949753v2_alt 724897 234 + 796479 actctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctc--------------------------------agtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttggctgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgggattacaggcatgagccaccacgcccggc s panTro4.chr19 59923558 266 + 63644993 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagtctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttctgtatttttagtagagacagggtttcaccatgttggccgagctggtctcgatctcctgacctcgtgatctgcccacctcagcctcccgaagtgctgagattacaggcatgagccaccacgcccggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869140 266 + 60714840 gctctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcagcctccgactcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacagggtttcaccatgttagctgggctggtctcgatctcctgacctcgtgatctgcccacctcagcctcctgaagtgctgggattacaggcatgagtcaccacgcccggc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657017 266 + 64156825 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgaccgggtgatccgcccgcctcagcttcccaaagcgctgggattataggcatgagccaccacgcctggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798067 266 + 59248254 actctgtcacccaggctggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggctgatctcgatcttctgacctggtgatctgcccgcctcagcttcccagagcgctgggattataggcatgagccaccacgcctggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906357 266 + 51301725 actctgtcacccagactggagtgcagcggcacaatctcagctcactgcagcctccacctcctgggttcaagtgattctcctgcctcggcctcctgagtacctgggactacaggcgtgtgccaccacgactggctaatttttgcatttttagtagagacggggtttctccatgttggccaggctgatctcgatcttctgacctggtgatccgcccgcctcagcttcccaaagcactgggattataggcgtgagccaccatgcctggc i papAnu2.chr19 I 299 C 0 s chlSab2.chr6 47610144 266 + 50890351 actctgtcatccagactgaagtgcagcagcacaatctcagctcactgcagcctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctggggctacaggcgtgtgccaccacgactggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctgatcttgatcttctgacctggtgatccgcccgcctcagcttcccaaagcgctgggattacaggcatgagccaccgcgcctggc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e calJac3.chr22_GL285922_random 14534 0 + 138250 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=413140.000000 s hg38.chr19_GL949753v2_alt 725131 201 + 796479 cAGTATCACATGTTTATACCCACAGATATTCGCAGCCGAGAATTTTCGGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgacagcagtggtgcaatcatggctcactgcagcctcaa s panTro4.chr19 59923824 199 + 63644993 cagtatcacatttttatacccacagatattcgcagctgagaattttcgggtaatataacttgcgtcttttatttttgttgttgttattgttcccctaaagtttatat--gttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgcaatcatggctcactgcagcctcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869406 201 + 60714840 cAGTATCACATTTTTATACCCACAGATATTCGCAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTTGTTGTTATTGTTCCCCTAAAGTTTATAtttgttttttatttttattttcttttgaggcagggtctcactctgtcacccaggtttgagagcagtggtgccatcatggctcactgcagcctcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60657283 183 + 64156825 cAGTATCACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAACTTGCTTCTTTTATTTTTGTGGTTG---TTGTTCCCCTAACGTTTATAtttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798333 183 + 59248254 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgcttcttttatttttgtggttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906623 186 + 51301725 cagtatcACATTTTTATACCCACAGATATTCACAGCTGAGAATTTTCAGGTAATATAacttgcttcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgaggcagggtct------------caggcttgagagcagtggtgcaatcatgactcactgcagcctcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610410 186 + 50890351 cagtatcacatttttatacccacagatattcacagctgagaattttcaggtaatataacttgctgcttttatttttgttgttg---ttgttcccctaacgtttatatttgctctttatttttgttttcttttgcggcagggtct------------caggcttgagagcagtggtgcaatcatggctcactgcagcctcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14534 192 + 138250 CAGTATCACATGTTTATACTCACAGATATTCACAGTTGAGAATTTTTAGGTAATATAACTTGCTTCCTTTATTTTTTTTTT-----TCCTTCCCCTAAAGTTTATATTTG----TCAttttcattttcttttgaggcagggcctcactctgtcagctaggcttgagagcagtggtgcagtcgtggctcactgcagcctcaa i calJac3.chr22_GL285922_random C 0 I 104 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=385142.000000 s hg38.chr19_GL949753v2_alt 725332 201 + 796479 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac s panTro4.chr19 59924023 201 + 63644993 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctaa-ttttttatattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcgaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56869607 202 + 60714840 cctccctgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggcatgtggtaccacacccagctgatttttttgtattttttgtatatgagacaaggtttcaccatgttgcccaggctggtctcaaactcttaggctcaagcgatcccgcctcagcctcccaaagtgctggga-----------------------ttacaggtgtgagccac i ponAbe2.chr19 C 0 T 11733 s rheMac3.chr19 60657466 201 + 64156825 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctgggaGTGAGCCCACTCTGAGCCCACACTTACAGGTGTGAGCCAC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798516 178 + 59248254 -----------------------ctacctcagcctcctgagtatctgagagtaggcatgtggtaccacacccagctaa-ttttttgtattttttgtatatgagactaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcgatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47906809 201 + 51301725 cctccccgggctcaggtgatccccaacctcagcctcctgagtatctgagagtAGGCATGTggtaccacacccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtcttgaactcttaggctccagcaatcctgcctcattctctcagagtgctggga-----------------------ttacaggtgtgagccac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610596 201 + 50890351 cctccccgggctcaggtgatccccaacctcagcctcctgagtacctgagagtaggtatgtggtaccacatccagctaa-ttttttgtattttttgtatatgagacgaggtttcaccatgttgcccaggctggtctcgaactcttaggctccagcgatcctgcctcattctcccaaagtgctggga-----------------------ttacaggtgtgagccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14830 149 + 138250 CCTCcctgggctcaggtgatccccatcctccgtcttctgagtacctgagagtaggcacgtgctaccatacccagctaa--tttttgtgttttttgtatatgaggtggtgtttcacaatggcgtccaagctagtctgaaacttctgggctca-------------------------------------------------------------------------- i calJac3.chr22_GL285922_random I 104 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=155623.000000 s hg38.chr19_GL949753v2_alt 725533 94 + 796479 tgtgccTAGGCTATACTGGTCTTTTTAAAATCTACTTAGTTTACTTGACCTCTAAAATTATTTTTCCTCTGTCTTCTGATAGCATCTCAGTATG s panTro4.chr19 59924224 92 + 63644993 tgtgcctaggctatactggtcttttaaaaatctacttagtttactTGACCTCTAAAATTATTTTTCCT--GTCTTCTGATAGCATCTCAGTATG i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60657667 94 + 64156825 TCTGCCTAGGCTATACCTGTCTTTTAAAAATCTACTTAGTTTACTTGACCTCTGTAATTATTTTTCATCTGTCTTCTGATAGCATCTCAGTATG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55798694 94 + 59248254 tctgcctaggctatacttgtcttttaaaaatctacttagtttacttgacctctgtaattatttttcatctgtcttctgatagcatctcagtatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907010 94 + 51301725 tctgcctagGCTatacttgtctttttaaaatctacttagTTTACTTGACctctgtaattatttttcatcTGTCTTCTGATAGCATCTCAGTATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610797 94 + 50890351 tctgcctaggctacacttgtctttttaaaatctacttagtttacttgacctctatcattatttttcatctgtcttctgatagcatctcagtatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 14979 86 + 138250 --------ggcaatactTGTctttttaaaatctacttagtttacttgacctctataattatttttcctctttcttctaatagcttctcagtatg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e ponAbe2.chr19 56869809 11733 + 60714840 T e nomLeu3.chr10 103362684 100 - 106955855 I a score=57556.000000 s hg38.chr19_GL949753v2_alt 725627 24 + 796479 ATTTTCCACTATGTTAAGACGAGG s panTro4.chr19 59924316 24 + 63644993 ATTTTCCACTATGTTAAGACAAGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858076 24 + 60714840 ATTTTCCACTATGTTAAGACAAAT i ponAbe2.chr19 T 11733 C 0 s rheMac3.chr19 60657761 24 + 64156825 ATTTTCCACTATGTTAAGACAAAT i rheMac3.chr19 C 0 I 335 s macFas5.chr19 55798788 24 + 59248254 attttccactatgttaagacaaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907104 24 + 51301725 ATTTTCCACTATGTTAAGACAAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610891 24 + 50890351 attttccactatgttaagacaaat i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15065 24 + 138250 attttccactatgttaagacaagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=49609.000000 s hg38.chr19_GL949753v2_alt 725651 21 + 796479 AATTGACCCATTCTTACATTT s panTro4.chr19 59924340 21 + 63644993 AATTGACCCATTCTTACATTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858100 21 + 60714840 AATTGACCCATTCTTACATTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658120 21 + 64156825 AATTGACCCATTCTTACATTT i rheMac3.chr19 I 335 C 0 s macFas5.chr19 55798812 21 + 59248254 aattgacccattctttttttt i macFas5.chr19 C 0 I 780 s papAnu2.chr19 47907128 21 + 51301725 AATTGACCCATTCTTACATTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610915 21 + 50890351 aattgacccattcttacattt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15089 21 + 138250 aattgacccattattacattt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=205260.000000 s hg38.chr19_GL949753v2_alt 725672 117 + 796479 GGAGGCTTCTCTAAGCAACTTTCCCATTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTGGTGCCATCCTTCTGTCTTTTCCcaa s panTro4.chr19 59924361 117 + 63644993 GGAGGCCTCTCTAAGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGtgctcactagccctgattcacagccgtcgtcctggaacttctttgtgccatccttctgTCTTTTCCcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858121 117 + 60714840 GGAGGCTTCTCTAGGCAACTTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAACTTCTTTCTGCCATCCTTCTGTCTTTTCCcaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658141 117 + 64156825 GGAGGTTTCTCTGAGCACACTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACCAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTcccaa i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47907149 117 + 51301725 GGAGGTTTCTCTGAGCACCCTTCCCGTTCCCCCTTCACCCAAGCTGTGTGCTCACTAGCCCTGATTCACAGCCGTCGTCCTGGAGCTTCTTTCTGCCATCCTTCTGTCTTTTCCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47610936 117 + 50890351 ggaggtttctctgagcaaccttcccgtttccctttcacccaagctgtttgctcactagccctgattcacagccgtcgtcctggagcttctttctgccatccttctgTCTTTTcccaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15110 117 + 138250 gaagttttctctaagcaaccttcccattcccgctgcacctaagctgtgtgctcactagcccggattcacagctgtcatcctgaagcttctgtctgccgtccttctgTCTTTTCCcaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55798833 780 + 59248254 I a score=11915.000000 s hg38.chr19_GL949753v2_alt 725789 5 + 796479 gtgac s panTro4.chr19 59924478 5 + 63644993 gtgac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858238 5 + 60714840 gtgac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658258 5 + 64156825 gtgac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799613 5 + 59248254 gtgat i macFas5.chr19 I 780 C 0 s papAnu2.chr19 47907266 5 + 51301725 GTGac i papAnu2.chr19 C 0 I 322 s chlSab2.chr6 47611053 5 + 50890351 gtgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15227 5 + 138250 gtgat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=87402.000000 s hg38.chr19_GL949753v2_alt 725794 40 + 796479 tcacctacctcaacctcccaaagtgccgggattacaggcg s panTro4.chr19 59924483 40 + 63644993 ccacctacctcaacctcccaaagtgctgggattacaggcg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858243 40 + 60714840 ccacctacctcaacctcccaaagtgctgggattacaggcg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658263 40 + 64156825 ccacccacctcaacctcccaaagtgctgggattacaggca i rheMac3.chr19 C 0 I 332 s macFas5.chr19 55799618 40 + 59248254 ccgcctgtctcagcctcccaaagtgctgggattacaggct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907593 40 + 51301725 ccccccttctcggcctcccaaagtgctgggattacaggct i papAnu2.chr19 I 322 C 0 s chlSab2.chr6 47611058 40 + 50890351 ccacccacctcaacctcccaaagtgctgggattacaggca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 15232 40 + 138250 ccacccatctcaggctcctaaagtgctgggatgacaggcg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=67257.000000 s hg38.chr19_GL949753v2_alt 725834 33 + 796479 tgagccactgtggccagccattcttttcctttt s panTro4.chr19 59924523 33 + 63644993 tgagccactgtggccagccattcttttcctttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858283 33 + 60714840 ttagccactgtggccagccattcttttcctttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658635 33 + 64156825 tgagccactgcgcccggccATTCTTTTCCTTTT i rheMac3.chr19 I 332 C 0 s macFas5.chr19 55799658 33 + 59248254 tgagccactgcgcccggccATTCTTTTCCTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907633 33 + 51301725 tgagccactgcgcctggccattcttttcctttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611098 29 + 50890351 tgagccatcg----tggccattcttttcctttt i chlSab2.chr6 C 0 I 1988 s calJac3.chr22_GL285922_random 15272 33 + 138250 taagccaccattcccagccattcttttcctttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1738065.000000 s hg38.chr19_GL949753v2_alt 725867 781 + 796479 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagcgatcctcctgccttggcctcccacagtgctaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaacgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGACGGTGCATTATC-----TTATTTTTATGAttttaaaaatgtatacagaattgtacatatttatggggtggacagcaatattgcagtacatgtatacaacgtgctatgatcaaatcagggtaattgacatattcatcCC----TGTAtt-ttttgagacaaagtcaggcttcgtcacccgagctagagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgtgttttt----ttgttttg--ttggtagagatgaggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAAGGAA----AATGAATGACATACCCAAACTGCCTGCAAGACCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGGAGATGGA------GTGAGGGTGAGAGTTTCTGGGG s panTro4.chr19 59924556 780 + 63644993 ttaaaacaatttttatcttctttattttaagtagagatg-gggtctcactgtgttgcccaggctggtctcgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgttaggattacagacatgatccactgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatC-----TTATttttattattttaaaaatttatacataattgtacatatttatggggtagacagcaatatttcaatacatgtatacaatgtgttatgatcaaatcagggtaattaacatattcatccc----tttatt-ttttgagacaaggtcaggctttgtcacccgagctagagcgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccattctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacctggctaatttttgt-ttttt----ttgttttg--ttggtagagatggggtttcaccatgttgcacaggctgatcttgTTTTCTAATGTGAAGGGAAGCGGGCAACGTGCTAGTTTTACACTAGGGAA----AATGAATGACACACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACCGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56858316 792 + 60714840 tttaaacaatttttatcttctttattttaagtagagatg-gggtctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccattgcacttggccCAgtggtacagttttacactcattagatggtcaagaaatgcctaaatgctataataaatatagaactttaccttgcgaagacctaacatttccttcagaaagtaaatatgagaggggtGGAGATGGTGCAttatcttattttatttttattattttaaaaatttatacatagttgtacatatttatggggtagacggcaatatttcaatacatgtatgcaatgtgttatgatcaaatcagggtaattaacatattcatcactttatttatt-tttcgagacaaagtcaggctttatcacccgggctagagtgcagtggtgtgatcttagctcactgcaacctctgccttccaggctcaagccgttctcccacctcagccccctgagttgctgggagtatagggatgcaccaccacacgtggctaatttttg--ttttt----ttgttttt--ttggtacagatggggtttcaccatgttgcacaggctgaccttgTTTTCTAATGTGAAGGGAAGCGGGTAACGTGCTAGTTTTATACTAAGGAAAATGAATGAATGACATACCCAAACTGCCTGCAAGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60658668 771 + 64156825 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55799691 771 + 59248254 TTAAAAAaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacacattagatggtcaagaaatgcct-aatgcgataataagtatagaactttactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtagagatggtgcattatCTTAttttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----ttTGtttttttgagacatggtcaggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47907666 772 + 51301725 ttaaaaaaatttttatcttc-----tttaagtagagatg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtcctgggattacagacatgatccactgcacccaacccagtGGTACAGTTTTACACGCATTAGATGGTCAAGAAATGCCT-AATGCGATAATAAGTATAGAACTTTACTTTGAGAAGACCTAACATTTCCTTCAGAAAGTAAATATGAGAGGGGTGGAGATGgtgcattatcttattttatttttattatttttaaaatgtatacataattgtacatatttatggggtaggcagcaatatttcaatacatgtgtacaatgtgttttgatcaaatcagggtaattagcatattcatcac----tttgttattttgagacatggtcgggctttgtcacccgggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggctcaagccgttctcccacctctgccccctgaGGTGCTGGGAGAATAGGGatgcacccccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgATGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACGGCCCGTTCTGAGAGCCGAAAGGGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGAGAGTTTCTGGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613115 771 + 50890351 TTAAAAAaatttttatcttc-----tttaagtagagctg-ggatctcactatgttgcccaggctggtcttgaactcctgggctcaagtgatcctcctgccttggcctcccaaagtgctaggattacagacatgatccactgcacccgaccCAgtggtacagttttacacgcattagatggtcaagaaatgcct-aatgtgataataagtatagaacttgactttgagaagacctaacatttccttcagaaagtaaatatgagaggggtggagatggtgcattatCTTACtttatttttattattttaaaaatgtatacataattgtacatatttatggggtagacagcaatatttcagtacatgtgtacaatgggttttgatcaaatcagggtaatgagcatattcatcac----ttTGtttttttgagacatggtcgggctttgtcacccaggctggagtgcagtgatgtgatctcagctcactgcaacccctgcctcccaggctcaagccgttctcccacctctgcccactgaggtgctgggagaatagggatgcaccaccacacctggctaatgtttg--ttgtt--------------ttggtagagatggggtttcaccatgttgcacaggccgatGTTGTTTTCTGATGTGAAGGGAAGAGGGCAACGTGCTAGTTTTATACTAAGGAA----AACGAATGACGTACCCAAACTGCCTGCACAGCCCGTTCTGAGAGACGAAA-GGAGATTTGTTAGACTGCAGTGGAAGATGGA------GTGAGGGTGCGAGTTTCTGGGG i chlSab2.chr6 I 1988 C 0 s calJac3.chr22_GL285922_random 15305 792 + 138250 taaaaaaactttttctcttctttatttttagtggagacgcgggtctcactatgctgcccaggctggtcttgaactcctcggcttaagtgatcctcctgccttgcccacccgaagtgctaggattacagacgtgatccactgtaccTCGTGCAgtggtatagttttacactcattagatgatcaagaaatgcctaaatgccataataaatgtagaactctactttgagaagacctaatatttccttcagaaagtaattatgagaggggtGGAGATGGTGCAttatcttattttattttt---attttaaaaatttatacataattgtacatatttatggggtaggtaacaatatttcaatacatatataccatgtgttatgatcagat-gggataattagcatattcatcac----tttatt-ttttgagataaggtcgggctctgtcactcaggctggagtgcagcggtgtgatctcagctcactgcaacctctgcctcccggactcaaacccttctcccacctcagcccccggagttgctaggactataggcatgcatcaccacacctggccgatttttg--ttttctgttttgttttgttgtggtagagatggggtttcaccgtgtcgcacaggctgatcttgTTTTCTAAAGTGCAGGAAAGCAATCAACAGGCTAGTTTTACACTAATGAA----AATGAACGACATACCCAAACTGCCCGCAAGGCCTGTTCTAAGAAATGAGA-GGAG-TGAGTTAGACTGCAGTGGAAGATGGAGTTGGGGTTGGGGTGAGTGTTTCTGGGG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 102786576 0 + 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=1384272.000000 s hg38.chr19_GL949753v2_alt 726648 578 + 796479 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCCGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC------CAGTCTTTGAGTCGCCTCCCATGCCATGATCCCTCCCTTGGATACGACCGTGCC-TGGGGTTC-AGCGGTCATGAACATAACCCGCGGCTGTGAACATCCTGTCGGCCTCCATCCTGACCCCCGTTTGATTTCCGGGTCAGCGGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGCAGGCGCTTCCTCCGGCTG s panTro4.chr19 59925336 580 + 63644993 AAA-ACCAGACA-AGAGCACAGAGGGCCAAAGGGAAGCACGGGAGGATTTTGCACAGAGGATGGAACAGAGTCAACCCTGAGAGCTGGGAACCTTAGAGATCCGTCTGGAGCCCATATTAGAGA-GGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCCCTcagacagagaggcagacagacagacagacaCTGGCTGAACGGCTCCCTGATGGAACACCAGGAGGAGGCAGCCTGGCC--TCGTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCATGTTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCACGATCCGTCCCTTGGATACGACCGTGCC-TGGGGTGC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCCGGGTCTGCAGGAGGGGCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGCCCCTGTGCCGAAGGCGCTTCCTCCGGCTG i panTro4.chr19 C 0 I 681 s ponAbe2.chr19 56859108 570 + 60714840 AAA-ACCAAAC---GAGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTTTTCACAGAGGGTGGAACAGAGTCAACCCTGAGAGCTGGGAACGTTAGAGATCCGTCTGGAGCCCATATTAGAGAGGGTTGAAGAAAGAGGCCAGTATG-TGGTCCAGCCAGGGTACCATGTCATCCACAGTGTGCAAG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGAGGGTGCGCTcagacagagagccagacagacagacagacaCTGGCTGAACGGCTCCTTGAGGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCTGTAGCCTCTGCCCTCCTGCTTCCACGCTCCACACACGC----CACAGTCTTTGAGTCACCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTAGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGACCCCCGTGTGATTTCTGGGTCT---------GCGGGAGGGGCGGAAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60659439 566 + 64156825 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTCCTGCACAGAGGAGGGAACAGCGTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTCAGACAGAGAGC----CAGACAGACAGACACCGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACAACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55800462 566 + 59248254 GGACACGAGACA-AGAGCACAGACGGCCAAGGGGAAGCACGGGA-GGTTCTGCACAGAGGAGGGAACAGTGTCAGCCCTGAGAGCTGTGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGCTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTACCGGGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagc----cagacagacagacaCCGGCTGAACAGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACGTCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAAGCGCTTCCTCCGGCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47908438 569 + 51301725 GGACACGAGACA-AGAGCACAGACAGCCAAGGGGACTCACAGGAGGGTTCTGCACAGAGGAGGGAACA--GTCAGCCCTGAGAGCTGGGAACGTTAGAGGTCCGTGTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAGGACGGTATG-TGGTCCAGCCAGGGTCCCGTGTCATCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAACGGA-GGTGCCCTcagacagagagccagacagacagacagacaccgGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACC-CTGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACAC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-AGTGGTCATGAACATAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47613886 567 + 50890351 GGACACGAGACA-A-AGCACAGAGGGCCAAGGGGAAGCACGGGAGGGTTCTGCACAGAGGAGGGAACAGAGTCAGCCCTGAGAGCTGGGAATGTTAGAGGTCCGTCTGGAGCCCGTATTAGAGAAGGTTGAAGAAAGAAGCCAGTATG-TGGTCCAGCCAGGGCACCGTGTCCTCCACAGTGTGCAGG----GAG---GAGGATG-GGGTCTCCA-CAGATTCCTTCCATCCCAAATGGA-GGTGCCCTcagacagagagc----cagacagacagacaCTGGCTGAACGGCTCCTTGATGGAACACCAGGAGGAGGCAGCATGGCC--TCCTTTCCACAGCCGTAGCCTCTGCCCTCCTGCTCCCATGCTCCACACACGC----CACAGTCTTTGAGTCGCCTCCCATGCCATGATCCGTCCCTTGGATACGACCATGCC-TGGGGTTC-GGTGGTCATGAACGTAACCCGCGGCTGTGAACATCCGGTCGGCCTCCATCCTGATCCCCGTGTGATTTCCGGGTCG---------GCGGGAGGGGCGGGAGCGGCCTCTGCACAGCCCTGACCCTGTGCCGCAGGCGCTTCCTCCGGCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16097 544 + 138250 AAA-ACCAGAT---GAGCACAGAGGGCCAAGGGGAAGCATGGAG-GGTTCTGCGCAGAGGATGGAACAGAGTCGGCCGTGAGAGCTGGGAACGTTAGAGATTCATCTGGAGCCCGTATTACGGAAGGTTGAAGAAAGAGGCTGGTATG-TGGTCCAGCCAGGGTACCATGTGATCCACAGTGTGCAGG----GAG---G------------------AGACTCCTCCCATCCCAAATGGAGGGCGTCCTCGGACAGGGAGC--------CAGGCAGACACTAGCTGAACGGCTCCTTGATGGAGCACCAGGAGGAGGCAACATGGCC--TCCTTTCCAAG-CTGTAGCCTCAACCCTCCTGCTCCCATGCTCCACGTACAC----CACAGTGTTTGAGTTGTGTCCCATGCCATGATCCATCCCTTGGATATGACCATGCC-TGGGGTTC-ACTGGTTATGAGGAGAACCCGTGGCTGTGAACATCTGGTCGACCTCCATCCTGACTCCCGTGAGATTTCCGGGGCT---------GTGGGAGGGGTGGGAGTGGCCTCTGCATAGCCCTGACCCTGTGCCGCGGGCGCTTCCTCCGGCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20066459 551 - 122678785 AAA-AAAAAACACAAAATACAGGAGCCTACAGGGAACCATGGGAGTGTTTTGTACAGAGGATAGAACAGGGTCAGCTATGAGGCTTGGGGATA-CAGAGGTCAATCCATAACATGTATTAGGAAAGGCTG----AAGAGGTCAGTATGATGGTCCAGTTAGGTTGCCATAATATCCGTGATGTGCAAGCTATGAGTGAAAGGATGCTAGCATCCATTAGATACTCCCTATCCCAAATGAACAGAGTCCTTGGACAAAAAAC----CAAATAGACA---------TCAACAACTCCTTTATGGGGCATCACAGAGAAGACCCGTGACCCTCCTTCTCTACAGTCATAACCCCTATCTTCCTGCTCTTATGTTCCACACACTCCAAGCATGGTCTTTA---------------CACTCCCTACCTCATAGACACAACCAAGCCTTGAAGTTCTAATGGT-------GGGACCCATGGTTATGGCCATCTGGTCGACCCCCATCCTGATGACTGTGTGGTTTCTGGGTCT---------GTGGGAGGGGTGGGAGTGGCCTGTGGACAGCTCTGACCCGGAGCAACAGGGGTTTCTTTCTGCTG i canFam3.chr1 I 1307 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=515810.000000 s hg38.chr19_GL949753v2_alt 727226 234 + 796479 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGATTATTAGGATCACAGCCCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGCAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AAGAGCCCACCTCCAGGACCCCCTCCAAGCCACAT-CTGGGCTTCTCA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCGCTCACTTTCCTGGAGGGTC s ponAbe2.chr19 56859678 234 + 60714840 TGCCAGTCCTCTGCCAGAAACCCCGCCAGGAGTATTAGGATCACAGCCCCAAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGTGGACAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTAA-AAGAGCCCACCTCCAGGATCCCCTCCAAGCCACAT-CTGGGCTTCTGA------------------GAGATCCTATTATTCTCTACTAGCTAGGGGATGCCACTCGCTTTCCTGCAGGGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660005 233 + 64156825 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGTGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGG-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801028 233 + 59248254 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCAAGCCACATCCTGGGCTTCTCA------------------GAGAGCCTGTTATTCTCCACTAGCT--GGGGTGCCATTCTCTTTCCTGGAGGGTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909007 233 + 51301725 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCACAGCCCCGAGGCATATGCGGACCAGGTTGCCCTTGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTCA-AAAAGCCCACCTCCAGGACGTTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTATTCTCCACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614453 233 + 50890351 TGCCAGTCCTCTGCCAGAAACCCTGCCAGGAGTATTAGGATCGCAGCCCCGAGGCATATCCGGACCAGGTTGCCCATGGTGTAGTGCTGGCGGGCGGGACCTGGAGGAATGAGGACAGGCAGGAGCGGGTGA-AAAAGCCCACCTCCAGGACCCTCTCCGAGCCACATCCTGGGCTTCTCA------------------GAGATCCTGTTGTCCTCTACTAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16641 233 + 138250 TGCCAGTCCTCTGCCAGAAATCCCGCCAGGAGTATTAGGATCACAGCTCCGAGGCATATCCGGACCAGGTTGCCCTTGGTGTAGTACTGGCGGGAAGGACCTGGAGGAATGAGGAGAGGCAGGAGCAGGTGA-AGAAGCCCATCTCCAGGACCCCCTCCAAGCCACATCTTGGGCTTCTCA------------------GAGATCCTATTATCCTCTACCAGCT--GGGATGCCATTCTCTTTCCTGGAGGGTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067010 252 - 122678785 TGCCAATCTTCTGCCAGAATTCCCACCAGGAGTATTAGAATCACAGCTCCAAGGCATATCCGGACCAGATTGCCCTTGGTGTAGTGCTGGTGAGCAAGACCTGGAAGAATGAAGAGAGACAGGAGCAGGTGACAAAAGCCTATCTCCAGGACCCACTTCAAGGCGCATCTTGAGCTTCTCATAGCCATATCTCTCATTTGAGGTCCTATTATTCTCTGCTATCT--AGAATGCCAGTCTCCTTCCTAGAGAGTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e panTro4.chr19 59925916 681 + 63644993 I a score=1342667.000000 s hg38.chr19_GL949753v2_alt 727460 555 + 796479 CCTCCCTTCCCGAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCCTGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------ACTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGCGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACACACATGGGGAGGCACAATTCCACAGCATTTAAGAAAAGCAT s panTro4.chr19 59926597 546 + 63644993 CCTCCCTTCC-GAATAGGAGTCGGGGCCAGATGACCCCA-TCCTCTAAGTAGCAC---TCCCCTCTGTGTTCTCACAGGGCTATGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGCATTGCAAAAGAGAGGACAGTTATAAGGGGTGGG-GAAGAGATGGAATTTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATATGCTGATATTCTGCCTTT-------ACTCTACACGCTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGAGAAGGAAGGGGGTCTGGAGAGGATGACTTACTCACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGTCACTGTGCCTACTCCGAACACACACAC----GGGGAGGCACAATTCCACAGCATTTAAGAAGAGCAT i panTro4.chr19 I 681 C 0 s ponAbe2.chr19 56859912 547 + 60714840 CCTCCCCTCCCAAGTAGGGGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCTCTCACAGGGCTCTGAGAC----AACTCCTCCCCAGACAC----AGATGCTGCCTCGTTATCTGATGGGTTGCAAAAGAGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCACCTGATCTTAATGCCCAATTCTGAACCCCATACGCTGATATTCTGCCTTT-------GCTCTACACACTGGAACCCAAGATCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGAGTTGGCTTT-GGTGAAGAGACGGGTGGGAAGGAAGGGGGTCTGGAGAGGATGACTT----ACCAGCTGGAGAGTCTGACTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAACAAAGGCTAAGTGT---GAAATGAAACCATATTCCCGCCCCCTGCCACTGTTCCTACTCCTAACACACACAT----GGGGAGGCACAATTCcacagtatttaagaagagcat i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660238 557 + 64156825 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTGCCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGAGATGGCATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCAGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801261 557 + 59248254 CGTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGCCCCCAGTTCTCTAAGTAGCATCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCCGCCTCCTTACCTGATGTATTGCAAAAGGGAAGACAGTTATAAGGGGTGGG-GAAGACATGGAATCTCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCGCCTGGTCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTCGGGTGAAGAGATGGGTGAGAAGGAAGGGGGTCTGGAGAGGACGACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTTTCCC-ATCACCGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGCGCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909240 556 + 51301725 CGTCCCCTCCTGAGGAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCATCTCTCCCTCGTGTGCTGTCACAGGACTCTGAGACAACTAACTCCGCCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATggaatctctctttctctgaccctttttaaaatctcaaccTTCCCGCCTGATCTTAATGCGCAATTCTGAACCCCATACGCTGATATTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTGAATAGATGGGTGAGAAGGAAGGGGGTCTGGAGGGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTGGCGGTGATACTCCTAGAAGTCTCTGGGAA-CCaaaaaaaGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-GTCACTGTGCCTACTCCGAACACACACAC--GTGGGGAGGTCGAATTCCACAGCATTTAAGAAGAgcat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47614686 554 + 50890351 CCTCCCCTCCCGAGTAGGTGTCAGGGCCAGATGACCCCAATTCTCTAAGTAGCGTCTCTCCCTCGTGTGCTCTCACAAGGCTCTGAGACAACTAACTCCACCCCAGACAC----CGATGCTGCCTCCTTATCTGATGTATTGCAAAAGGGAAGACAGTTATAA-GGGTGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTTTTAAAATCTCAACCTTCCCTCCTGATTTTAATGTGCAATTCTGAACCCCATACGCTGATCTTCTGCCTTC-------ACTCTACACACTGGAACCCAAGAGCTGAGAGCTGCAGCCCCTGTGTAGACAAAGGACTTGGCTTTGGGTG--GAGATGGGTGAGAAAGAAGGGGGTCTGGAGAGGACAACTTACTCACCAGCTGGAGAGCCTGGCTCCTTTGGACTAGCGGTGATACTCCTAGAAGTCTCTGGGAACCAAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCCTGTCACTGTGCCTACTCCGAACACACACAC--ATGGGGAGGTCGAATTCCACAGCATTTAAGAAGAGCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 16874 526 + 138250 CCCCCACTCCCCAGTAGGAGTCAGGGCAAGATGACCCCAATTCTCTAAGTAGCACCTCTCCCTCATGTGCCGTCACAGGGCTCTGAGAC----AACCCCTTCCCAGACAC------ATGCTGCCTTGTTAGCCAATGCGTTGCAAAAGAGAAGACAGTTATAAGGGGCGGG-GAAGAGATGGAA--TCTCTTTCTCTGACCCTTCAGAAAATCTCAACCTTCCCAGCTGAACTTAATGCCCAATTCTGAACCCCATACACTGATATTCCGCCTTC-------TCTCTACACACTGGAACCCAAGATCTCAGAGCTGCAGTTTCTGTATAGAGAAAGGAGTTGGCTTT------------GGGTGAGAAGGGAGAGGGTCTGGAGAGGATGACTC----ACCAGCTGGAGAGCCTGACTCCTTTGGACTGGTGGTGATACTCCTAGAAGTCTCTGGGAA-CCAAAAAAAGGCTAAGTGT---GAAATGAAACCATATTCCCTCCCCC-ATCACTGTCCCTACCCTTAACACACACAC---TTGGGAGGCAGAATTCCTTATTAC------AGAGCAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067262 526 - 122678785 CCTCCCCTCCTCACCAAGGATCAGGGCTAGATAAGCCAAATTCTCTAAATATCACTTC-----CACACACCCTCATGGGCCCCTGATGC----AACCCCTCCACACACACACACAGACACTACCTGGTTATTTGGCTAATTGCATTA-AAAAAACTGTCATAAAGGGCAGATAAAGAGATGGAATTTCTCTTTCCCTGATCCTTTAGAAATTTTCAACCTCCCCACCTGATCTTATTGCCCAATTCTGAGTTCCAAGGGCTTATATTTACCCTCCCCTTAATATTTTATATACCAGGACCCAAAATC--AGAGCTATAGCCTCTGCACAG-----------------------------GGGTGAGAATGAAGAGGGTCCAGAGAGGACCACTTACTCACCAGTTGGAGAGTCTGACCCCTTTGGAGAGACAGTGATAGTCCTAGAAGGCACTGGGAA-TCAAAAAGGA---AAGTATAAAGGAGTAAGACCATCTCCTGTAACCCTGTTCCTGC-CCCATCCCAAACACATGCCC---TTGTGAGGCAGAATCCCATGAC-TATAAGaggagcat i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=274203.000000 s hg38.chr19_GL949753v2_alt 728015 123 + 796479 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggtaggaggctggcttgagtccaggagttcaagaccaacctgagcaacatag-aaaaaccctatctctac--aaa s panTro4.chr19 59927143 125 + 63644993 Gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggcttgagtccaggagttcaagaccaacctgagcaacaaag-aaaaaccctatctctacaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860459 123 + 60714840 gggccgggcacggtgcctcatgcctataatcccagcactttgggaggctgaggcaggaggctggtttgagtccaggagttcaagaccaacctgagcaacgtgg-aaaaaccctatctctac--aaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660795 122 + 64156825 Gggccgggcacggtgcctcacgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctacctcagcaacatgg-aaaaaccctatctctac---aa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801818 122 + 59248254 Gggccgggcacggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcattgaagacctgcctcagcaacatgg-aaaaaccctatctctac---aa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909796 122 + 51301725 gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggctTGAGTCCAGGCATTGAAGACCCACCtcagcaacatgg-aaaaaccctatctctac---aa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615240 123 + 50890351 Gggccgggcatggtgcctcatgcctgtaatcccaacactttgggaggctgaggtgggaggctggcttgagtccaggcgttgaagacccacctgagcaacatggaaaaaaccctatctctac---aa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17400 122 + 138250 Gggctgggcacagtggctcacccctgtaatcccagcactttgggaggctgaggcaggaggatggcttgagtccaagagttcaagaccagcctaagcaacttgg-aaaaatcctatctctac---aa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067788 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=24892.000000 s hg38.chr19_GL949753v2_alt 728138 8 + 796479 aaaataca s panTro4.chr19 59927268 8 + 63644993 aaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860582 8 + 60714840 aaaataca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660917 8 + 64156825 aaaataca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801940 8 + 59248254 aaaataca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909918 8 + 51301725 aaaataca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615363 8 + 50890351 aaaataca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17522 8 + 138250 aaaataca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067788 8 - 122678785 aaactaca i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=416263.000000 s hg38.chr19_GL949753v2_alt 728146 179 + 796479 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtggaggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc----------aaa-------------------aaaaaaaaagcaagaactgta s panTro4.chr19 59927276 182 + 63644993 gaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgtaccactgcactctagcctgggaaacagagcgagaccctgtcc-------aaaaaa-------------------aaaaaaaaagcaagaactata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860590 201 + 60714840 aaaattagccaggcgtggtggcatgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattataccactgcactctagcctgggaaacagagcaagaccttgtcc-------aaaaaaaaaaaaaaccaacaacaacaaaaaaaaaacaagaacaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60660925 178 + 64156825 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcgctctagcctgggaaacagagcaagaccctgtcc-----------aa-------------------aaaaaaaaGgcgtgaactata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55801948 179 + 59248254 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtcc----------aaa-------------------aaaaaaaaagcgtgaactata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47909926 180 + 51301725 aaaattagccaggcgtggtggcacgtgccagtaatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgggaggtcgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgccc---------aaaa-------------------aaaaaaaaagcatgaactaTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615371 189 + 50890351 aaaattagccaggcgtggtggcacttgccagtaatcctggctattcagtgggggctgaggcaggaagatcacctgagccctgggaggttgaggctgcagtgagccaggattgcaccactgcactctagcctgggaaacagagcaagaccctgtccaagaaaaaaaaaa-------------------aaaaaaaaaaaatgaactata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17530 179 + 138250 aaaattagcctggcatgatgacacatgcctataatcccagctactcagtgggggctgaggcaggaagatcacctgagccctgagaggttgaggctgcagtgagccaggattgctccactgcactccagcctgggaaccagagcaagaccgtatct----------caa-------------------aaaaaaaaagcatgaactaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20067796 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I a score=497685.000000 s hg38.chr19_GL949753v2_alt 728325 206 + 796479 gagtcaggctgtcctccagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcaccgtgcttgacat---atgagcacctcatacgtg s panTro4.chr19 59927458 206 + 63644993 gagtcaggctgtcctccagatttgaactccaactctatcacctattagatgtcagttttctggcaagtgactccgcatctgtgagccag-ttcccc----atgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaagataataataatggtagaaatataaagcacagtgcttgacat---atgagcacctcatacgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860791 206 + 60714840 gagtcaggctgtcct-cagatttgaaccccaactctatcacctattagatgtcagttatctggcaagtgactcagcatctgtgagccagtttcctc----gtgtgtccaataaaattaacaagatcccttataggttgatgtgaaagtcaaaataataataatggtagaaatataaagcacagtgcttgacat---atgagcatctcatacgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661103 207 + 64156825 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802127 207 + 59248254 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagttatctggcaagtgactcagcatctgtaagccggtttcccc----atgtgtccaataaaattaacgagatccctcataggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acgggcacctcatacgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910106 207 + 51301725 GAGTCAGGCTGTCCTCCAGATTTGAACCCCAACTCTATCACCTGTTAGATGTGAGTTATCTGGCAAGTGACTCAGCATCTGTGAACCGGTTTCCCC----ATGTGTCCAATAAAATTAACGAGATCCCTCATAGGTTGATGTGAAAGTCAAGATAATAATAACGGTAGTAATATAAAGCACGGTGCTTGACAT---ACGGGCACCTCATACGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615560 205 + 50890351 gagtcaggctgtcctccagatttgaaccccaactctatcacctgttagatgtgagctatctggcaagtgactcagcatctgtgaactggtttcccc----acatgtccagtaaaattaacgagatccct--taggttgatgtgaaagtcaagataataataacggtagtaatataaagcacggtgcttgacat---acaagcacctcatacgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 17709 181 + 138250 gaatcagcctgtc---cagatttgacacccaaggctatcactta---------------------------tcagcatctgtgaagcagttttccctcctatgtgtccagtaaaattaatgatatcccttataggttggtgtgaaagtcaagatgataat---ggcagtaaaacaaagcacgctgcttgacatataatgagcacctcatacatg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20067796 206 - 122678785 gagttggg----catctagatttgaaccccagatctatccctaattagatgtggggcctctaccaaatgacttaacatctatgagccagttttccc----atctgtcaatgaaaataattataatacatcacaggttaatgtgaaatttaaatcaataacaataataacagcacaaggcacagttcttgacatatgataagcatcccacacgtg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=2338.000000 s hg38.chr19_GL949753v2_alt 728531 6 + 796479 ccagc-----t s panTro4.chr19 59927664 11 + 63644993 ccagctttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56860997 6 + 60714840 ccagc-----t i ponAbe2.chr19 C 0 I 608 s calJac3.chr22_GL285922_random 17890 6 + 138250 tcagc-----t i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068002 6 - 122678785 gcagc-----t i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=180.000000 s hg38.chr19_GL949753v2_alt 728537 1 + 796479 t s panTro4.chr19 59927675 1 + 63644993 t i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17896 1 + 138250 c i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068008 1 - 122678785 T i canFam3.chr1 C 0 I 29 e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=2851.000000 s hg38.chr19_GL949753v2_alt 728538 22 + 796479 tttttttttt-----ttttttgagaca s panTro4.chr19 59927676 22 + 63644993 tttttttttt-----ttttttgagaca i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 17897 27 + 138250 tctattcctcaagcatctcctgagaca i calJac3.chr22_GL285922_random C 0 I 1074 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=25501.000000 s hg38.chr19_GL949753v2_alt 728560 275 + 796479 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggttttgaactcctgaccttgtgatccgcccgcctaggcctcccaaagtgctgggattacaggcgtgagccactgcacccggccT s panTro4.chr19 59927698 275 + 63644993 gagtctggctctgtctcccaggctggagtgcagtggcccgatgtcggctcacttcaacctccgcctcctgggctcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtccgccaccacgcccagctaagttttgtatttttagtagagatgggatttcaccatattggccaggttggtctcgaactcctgaccttgtgatctgcccacctaggcctcccaaagtgctgggattacaggcgtgagccactgagcccagccT i panTro4.chr19 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47615765 0 + 50890351 C e papAnu2.chr19 47910313 0 + 51301725 C e macFas5.chr19 55802334 0 + 59248254 C e rheMac3.chr19 60661310 0 + 64156825 C a score=23477.000000 s hg38.chr19_GL949753v2_alt 728835 18 + 796479 CCAGCTCTCttattcctc s panTro4.chr19 59927973 18 + 63644993 CCAGCTCTCTTATTCCTC i panTro4.chr19 C 0 I 562 s rheMac3.chr19 60661310 18 + 64156825 ccagttctcttatttctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802334 18 + 59248254 ccagttctcttattTCTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910313 18 + 51301725 CCAGCTCTCTTATTTCTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615765 18 + 50890351 ccagttctcttattTCTC i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=500135.000000 s hg38.chr19_GL949753v2_alt 728853 429 + 796479 aagtatctcctgagactcgccaggtactcagccatgtgctgggccatgggaacccaaatattaataagacattgtcaggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggccaaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaaatag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaaaacaaaaaaaccataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagcgatt s panTro4.chr19 59928553 429 + 63644993 AAGTATCTCCTGAGACTCGCCAGGTACTCAACCATGGGGTGAGCCATGGGTACCCAAATATTAATAAGACATTGTCAggccaggcatgacactggctgaatgcctgtaatcccagcactttgggaggtcgaggtgggcggatcacctgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattag-ctgggcatggtggcacacacctgtagtcccagctactcaggagccggagattgcagtgagctgagatcgcagagtgagccgaaatcacagatcacagagtgagcagagtgagactccgtctcaaaaacaacaacaaaagacaaaaaaaCCataagacattgtccatctgcggttcccagactattgcaggagaccaaaaagtaaagtgatt i panTro4.chr19 I 562 C 0 s rheMac3.chr19 60661328 403 + 64156825 gagtttctcctgagactggccaggtactcagccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802352 403 + 59248254 GAGTTTCTCCTGAGACTGGCCAGGTACTCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcgtggtgacgggcgcctgcagtcccagctactcaggagtcggaggttgc------------------agtgagccgaagtcacagatcccagagtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagacattgtccatctgcggttctcagactattggaggagacagagaagtaaagcgatt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910331 420 + 51301725 GAGTTTCTCCTGAGACTTGCCAGGTACTCAGCCATGTGCTGGGCCATGGGAACCCACATATTAATAAGACATtgtcaggccaggcatggcacTGGctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatgcagaccatcctggccaacaaggtgaaaccccatctcttctaaaaatacgaaaattagcctgagcgtggtggcgcacgcctgtagtcccagctactcaggagtgggaggttgcagtgagccgagatcgcagagTGAGCCGAAGTCACAGATCCCAGAGtgagcagagtgagactccgtctcaa----aacaac----aacaacaaaaacataagaCATTGTCCATCTGCGGTTACGAGATTATTGGAGGAGAC--AGAagtaaattgatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47615783 413 + 50890351 GAGTTTCCCCTGAGACTTGCCGGGTAATCAGccatgtgctgggccatgggaacccacatattaataagacattgtcaggccaggcatggcactggctgaacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaagaaatggagaccatcttggccaacaaggtgaaaccccgtctctactaaaaatacgaaaattag-ctgggcatggtggcgcacgcctgtagtcccagctactcaggagtcggaggttgcagtgagccgagatcgcagagtgagccgaagtcacagatcctagagtgagcagagtgagactccgtctcaa--------------aacaacaaaaacataagacattgtccatctgcggttcccagaccattggaggagac--agaagtaaagcaatt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e calJac3.chr22_GL285922_random 17924 1074 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=96876.000000 s hg38.chr19_GL949753v2_alt 729282 98 + 796479 -tttttttttttt---taatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaggtcactgcaacctccaactcgtgagttcaagc s panTro4.chr19 59928982 96 + 63644993 -tttttttttaa-----aatacggagtctcactctgttgcccaggctggagtgctgtggtgtgatctcaagtcactgcaacctccaactcctgggttcaagc i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60661731 86 + 64156825 -tttttttttttc-----atatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802755 87 + 59248254 -tttttttttttt----aatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910751 87 + 51301725 -tttatttttttt----aatatggagtttcagtatgttgcccaggctgga----------gtgatctcagctcactgcaatctccaactcctgggttcaagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616196 89 + 50890351 -tttttttttttt--taaatatggagtctcactctgttgcccaggctgga----------gtgatctcagctcactgcaacctccaactcctgggttcaagc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 18998 69 + 138250 tttttgtatttttagtagagacagggtttcaccatgttgaccaggatcgt-------------------------------ctcgatctcttgaccttgt-- i calJac3.chr22_GL285922_random I 1074 C 0 e canFam3.chr1 20068009 29 - 122678785 I e ponAbe2.chr19 56861003 608 + 60714840 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=310586.000000 s hg38.chr19_GL949753v2_alt 729380 146 + 796479 gattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccactcaccttggc s panTro4.chr19 59929078 146 + 63644993 aattctcctgcctcagcctcccaagtagctggaattacaggtgcccaccaccacgcccggcta---------------------------atttttgtattttcagtagagatggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatacactcaccttggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861611 146 + 60714840 gattctcttgcgtcagcctcccaagtagcgggaattacaggtgcccgccaccacgcctggcta---------------------------atttttgtattttcagtagagacggggtttcagcatgttggccaggctggt------ctcctgacctcaggtgatccacccaccttggc i ponAbe2.chr19 I 608 C 0 s rheMac3.chr19 60661817 146 + 64156825 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtatttttagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802842 146 + 59248254 gattctcctgcctcagccttgcaagtagccggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccctgttggccacactggt------cccctgacctcaggtgatccacccgccttggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910838 146 + 51301725 gattctcctgcctcagccttgcaagtagctggaattacaggtgcccgccaccacgcccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttgcccaggctggt------ctcccgacctcaggtgatccacccgccttggc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616285 146 + 50890351 gattctcctgcctcagccttgcaagtagctggaattacagttgcccgccaccacacccggcta---------------------------atttttgtattttcagtagagacagggtttcaccatgttggccagactggt------cccctgacctcaggtgatctacccgccttggc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19067 179 + 138250 aatccaccctccttggcctcccaaagtgctgggattataggcgtgagccactgcgcccggccAATGCCCAATTCTTAACCCCCAGTAGAGatttttgtatttttagtaaagaataggtttcaccatgctggccaggctggtctcgaactccagacctcaggtgatccgcccaccttggc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20068009 29 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=857856.000000 s hg38.chr19_GL949753v2_alt 729526 344 + 796479 ctcccaaagtgctgggattacagacaaagcgataattttaatatactgtaaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagtgagtgggttgggtgcagagtcaggagaggttaggaagcctccaggagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT s panTro4.chr19 59929224 344 + 63644993 ctcctaaagtgctgggattacagacaaagtgataattttaatacactgtgaaaattgctgtaataggcagcccacaagacactgagcgagagcagaggaaaccat-cgatccagcctggacggtcaaggctttcttgaggaattgatgccatggggaaatggaagaaaaggcagagcgagtgggttgggtgcagagtcaggagaggttaggaagcctccagaagagCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGCGTGGAAGGTATGCAGACAAAATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCACAGAATAGCAAGCTGAGGAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56861757 344 + 60714840 ctcccaaagtgctgggattacagacAAAGCGACAATTTTAATATACTGTGAAAATTGCTGTAATAGGCAGCCCACAAGACactgagcgagagcagaggaaaccac-cgatccagcctggacagacaaggctttcttgaggaattgacTCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTGGCTTGGGTGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGCTTCAAGTGACTGTGTGTGGCTGAGAACAGCATGGGAA-TGTGTGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGGGGCTGG------------ATATCTAAGCTCCCAGAACAGCAAGCTGAGGAAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60661963 343 + 64156825 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcaagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55802988 343 + 59248254 ctcccaaagtgcggggacgacag-caaagcgataattttaatacactgtgaaaattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgaGGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAACCTCCCGAAGAGATTCAAGTGACTGTGCGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTACGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTACGCTCATGGAATAGCAAGCTGACGAAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47910984 343 + 51301725 ctcccaaagtgtggggatgaCAG-CAAAGCGACAATTTTAATACACTGTGAAAATTGCTGTAATAGACAGCCCACAAGACACTGAGCGAGAGCAGAGGAAGCCAC-GAATCAAACCTGGACGGCCAAGGCTTTCATGAGGAATTGAGGCCATggggaaatggaagaaaaggcaGAGCAAGTAGATTGGATGCAGAGTCAGGAAAGGTTAGGAAGCCTCCCGAAGAGATTAAAGTGACCGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTGTGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGGAATAGCAAGCTGACGAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616431 343 + 50890351 ctcccaaagtgcggggacgacag-caaagcgataattttaatatactgtgaacattgctgtaatagacagcccacaagacactgagcgagagcagaggaagccac-caatccagcctggacggccaaggctttcgtgaggaattgacGCCATGGGGAAATGGAAGAAAAGGCAGAGCAAGTAGATTGGATGCAGAGTCAGGAGAGGTTAGGAAGCCTCCAGAAGAGATTCAAGTGACTGTGTGGGGCTGAGAACAGCGTGGGAA-TGAATGGAAGGTATGCAGACAAGATTGGA------------GGGATCAACAGTGGCTGG------------ATATCTAAGCTCATGCAATAGCAAGCTGACAAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19246 345 + 138250 ctcccaaagtgctgggatgacaggcAAAGCGATCCTTGTAATATACTGTGAAATTTGCTGTAAGAGTCAGCCCACAGGACACTGAGCAAGAGCAGAGAAAACCAC-CAATGCAGCCTGGATGGTCAAGGTTTTCTTGAGGAATCGGTGCCATGGGGAAATGGAAGGAAAGGAAAAGCAAGTGGCTTGGGTGCAGAGGCAGGAGAGGATAGGGAGCCTCCAGAAGAGCTTCAGGTGCCTGTGTGTGGCTGAGAACAGCACGGGGACTGCATGGAAGGTATGCAGACAGGATTGGA------------GGGATCAGCAGCGGCTGA------------GTGTCTAAGCTCATGGAACAGCAAGCTGAACAAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20068038 338 - 122678785 CTTACCAGGTGCTCAGCCAGCAG-ACAGGTGCATATTTTAATATACTGTGTAAATTGACATAACAGGCAGTCCATAGGA-------------CAGAGGAAGCTATACAACCCAGT---GTCATAAAAGGCTTTCCTGAGAGACTGAGGCCATGAGGAAATAGAAGGAAAAACAGAGCAAGTGGCTTGGATGCAGAATCAGGAGAAGATGCCAAGGATCCAGGAGAGCTTCATCTGACTCTGTGTGGCTAAGATTTGCATGAGGA-------------ATGAAGACAAGA--GGATCAACGGAGTCTGGGATGAGCAGTGGCTGATCTAAGGGCATTGGGCCTAAAAGCATTGAATATCAAGCTAAGAAAT i canFam3.chr1 I 29 I 1070 e nomLeu3.chr10 103362684 100 - 106955855 I a score=142241.000000 s hg38.chr19_GL949753v2_alt 729870 62 + 796479 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA s panTro4.chr19 59929568 62 + 63644993 TGGAACTGCATCCTGAGGGTGATTGGGAGGTTCCGAACTGAAGATAGGGAAGGCTTCCATCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862101 62 + 60714840 TGGAACTGCATCCGGAGGGTGATTGGGAGGTTCTGAACTGAAGATAGGGAAGGCTCCCATCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662306 62 + 64156825 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803331 62 + 59248254 TGGAACTGCATCCTGAGGGTGACTGGGAGGTTCTGAACTGAAGATAGAGAAGGACCCCATCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911327 62 + 51301725 TGGAACTGCATCCTGAGGGTGACTGGGAAGTTCTGAACTAAAGATAGGGAAGGACCCCATCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616774 62 + 50890351 TAGAACTGCATCCTGAGGGTGATTGGGAGGTTCTGAACTAAAGATAGGGAAGGACACCATCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 19591 62 + 138250 TGGAACTGCATCCTGAGGGTGACCGGGAGGTCCTGAAGCGAAGATAGGGAAGGAGCCCACCA i calJac3.chr22_GL285922_random C 0 I 6 e canFam3.chr1 20068376 1070 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=522374.000000 s hg38.chr19_GL949753v2_alt 729932 310 + 796479 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctccaatcccagcactttgggaggccgagacaggtggatcatgaggtcaggagttcaagaccagccttcccaagatgctgaaaccccgtctctactaaaa-tacaaaaattagccaggtgtggtggcatgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa s panTro4.chr19 59929630 295 + 63644993 C------AGAACTCCCTGGGATATgccgggcgcggtggctcatgcctgcaatcccagcactttgggaggccgag----------------gtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcacgcacctataatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862163 311 + 60714840 C------AGAACTGCCTGGGATATgccgggcgcagtggctcatgcctgcaatctcagcactttgggaggccgagacgggtggatcacgaggtcaggagttcaagaccagcctgcccaagatgctgaaaccccgtctctactaaaaatacaaaaattatccaggcgtggtggcacgcacctacaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggcggcagaggttacagtgagccgagatcgcaccactgcactccagcctgggcgacagagcaagactccacctcaaaaaaataaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662368 315 + 64156825 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaacaccagcctggccaagatgctgaaaccccgtctataattaaaaaacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactg-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggtaccagcgagccgagatctcgcccctgcactacatcctgggtgacagagcaagactctacctctaaaaaataaaaa- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803393 315 + 59248254 CAGGGTTAGAACTCTCTGGGATATgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgggcacctgtaatctcagctactt-ggaggctggggcaggagaattgcttgaacccgggcagcagaggttacagcgagccgagatctcgcccctgcactacagcctgggtgacagagcaagactctacctctaaaaaataaaaa- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911389 315 + 51301725 CAGGGTTAGAACTCTCTGAGatatgccgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaagacgggtggattccaaggtcaggagttcaagaccagcctggccaagatgccgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggcacgcacctgtaatctcagctactt-ggaggctggggcaggagaatcgcttgaacccgggcagcagaggttacagtgagccaagatctcgccactgcactacagcctgggtgacagagcaagacaccacctctaaaaaataaaaa- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47616836 315 + 50890351 CAGGGTTAGAACCCTCTGGGATATgccggacgcagtggctcacgcctgtaatcccagcactttgggaggccgagatgggtggatcccaaggtcaggagttcaagaccagcctggccaagatgctgaaaccccgtctctactaaaaatacaaaaattagccaggcgtggtggcgcgcacctgtaatctcagctactt-ggagtctgaggcaggagaatcgcttgaacccgggcagcagaggttacagcgagccgagatctcgccactgcactacagcctgggtgacagagcaagactccacctcaaaaaaataaaaa- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20068376 1070 - 122678785 I e calJac3.chr22_GL285922_random 19653 6 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=478413.000000 s hg38.chr19_GL949753v2_alt 730242 212 + 796479 ta------gaaCTACGTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAAGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTGTGTCCAGGTGCCTACAGTC s panTro4.chr19 59929925 218 + 63644993 taaaaatagaaCTATGTGGGATCAGGTGCCTCAT-GAAAGTCAGAGTCATGTGGGCCCAGTGGAGGTATCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGAGA-TTTTCCAGGACAGGCAAGGGGAAAGAGAC--------TGAGGAAAGTGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTGCTATGTCCAGGCGCCTACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862474 218 + 60714840 taaaaatagaaCTATCTGGGATCAGGTGCCTCAT-GAAAGCCAGAGTCATGTGGGCCCAGTGGAGGTAGCTAACCTATTATCAGGGAATCTGTGAAGGTGT---TTAGTCTGGAAGGAAATGGCGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGCGGTTAGAAGATGTACTATGTCCAGGCGCCTACAGTC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662683 207 + 64156825 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55803708 207 + 59248254 ------tagaaCTCTC--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGACCCAATGGAGATACCTCACC---TATTAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACAGTC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47911704 210 + 51301725 ------tagaactctc--GGATCAGGTACCTCAT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATACCTCACCTGTTATCAGGGAATCCGTGAAGGCGT---TTAGTCTAGAAGGAAATGGGGA-TTTTCCAGGAAAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGATGTTCTAGGTCCAGGCGCCTACGGTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617151 212 + 50890351 ------TAGTACTCTCTGGGATCAGGTGCCTCGT-GAAAGCAAGAGTCCCGTGGGCCCAATGGAGATGCCTAACCTATTATCAGGGAATCCGTGAAGGTGT---TTAGTCTGGAAGGAAATGGGGA-TTTTCCAGGAGAGGCAAGGGGAAAGAGAC--------TGAGGAAAGCGTATCTGCAGAGGCCTGGAGTGGTTAGAAGGTGTACTAGGTCCAGGCGCCTACAGTC i chlSab2.chr6 C 0 I 92 s calJac3.chr22_GL285922_random 19659 218 + 138250 ------TAGAACCCTCTGCGATCAGGTGCCTCAT-GAAAGCCGGAGTCACGTGGGCCCAGCGGAGATAGCTAGCCTGTTATCAGGGAATCTGTGAAGGTGTTTATTAGTCTGGAAGGAAATGAC-A-CTTCCCAGGAAAAGCAAGGGGGAAGAAAC-TGCAGTGTGAGGAAGGCGTATCCGCAGAGCACTGGAGTGGTTAGA---TGTACGGTGTCCAGGCACCTACCCTC i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20069446 203 - 122678785 ------TAGAATTTGCTGGCATCAGGAATCGAGCAGAAAGCTAGAGTCAGGTGGACCCAGTCGAGATATCAGAACTATCCTCAAGGGATCTGC-AAGGTTT---TCTGTCTTGAGGAAAATTGATACTTTTCTAAGAAAAGGAAGGGGAAAGAGAGCTACAACATGAGGGAAGTATGT-TGCACAGAACTGCAGGAGTAAGAGGAAGCAGTGAG----------------- i canFam3.chr1 I 1070 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=8022.000000 s hg38.chr19_GL949753v2_alt 730454 4 + 796479 TGTG s panTro4.chr19 59930143 4 + 63644993 TGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862692 4 + 60714840 TGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662890 4 + 64156825 TGTG i rheMac3.chr19 C 0 I 30 s macFas5.chr19 55803915 4 + 59248254 TGTG i macFas5.chr19 C 0 I 30 s papAnu2.chr19 47911914 4 + 51301725 TGTG i papAnu2.chr19 C 0 I 30 s calJac3.chr22_GL285922_random 19877 4 + 138250 TGTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20069649 0 - 122678785 C e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617363 92 + 50890351 I a score=332687.000000 s hg38.chr19_GL949753v2_alt 730458 157 + 796479 TGCGTCC-GAGCATGGGCTCTACCTGGACACAGTGAGGAGC-GAGATTAAATACCTGG-ATCACAGCCGAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGG----CGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC s panTro4.chr19 59930147 161 + 63644993 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-GAGATTAAATACCTGG-ATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TCATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCGT-CCCGCCACAGCCTTG-----------------------------------------------------GCTCCGCCATCTTTGAAATGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862696 162 + 60714840 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACCTGGAATCACAGCCAAGTCCAAA-GCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATGGGTGGCGGTCTT-CCCGCCACAGCCTTG-----------------------------------------------------GCGCCGCCATCTTTGAAATGGCC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60662924 159 + 64156825 TGCGTCC-AAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGAACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCC---CCGTCTTTGAAATGGCC i rheMac3.chr19 I 30 C 0 s macFas5.chr19 55803949 162 + 59248254 TGCGTCC-GAGCGCGGGCTCTGCCTGGACACAGCGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCAAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAACAGTGTGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i macFas5.chr19 I 30 C 0 s papAnu2.chr19 47911948 162 + 51301725 TGCGTCC-GAGCACGGGCTCTACCTGGACACAGTGGGGAGC-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTATCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGTGTT-CCCACCACAGCCTTG-----------------------------------------------------GCCCCGCCGTCTTTGAAATGGCC i papAnu2.chr19 I 30 C 0 s chlSab2.chr6 47617455 162 + 50890351 TGCGTCC-GAGCACGGGTTCTACCTGGACACAGTGGGGAGG-AAGATTAAATACTCGG-ATCACAGCCCAGTCCAAAGGCCTAGGACT----------------TTACCCTGGGAGCAGTGCGTAGGGATAGCTGGCGGCGTT-CCCGCCACAGCCTTG-----------------------------------------------------ACCCCGCCGTCTTTGAAATGGCC i chlSab2.chr6 I 92 C 0 s calJac3.chr22_GL285922_random 19881 232 + 138250 TGTGGCTAGACCATGGGCTCTATATGGACACAGGGAGGAGC-AAGATTAAATCCTTGG-ATCACAGCCAAGTCAGAAGGGCGCAGTCTTCCCATCACAGCCTCGTTATCCTGGGAGCGGTGCGTAGGGAAGGGCAGCAGTCTT-CCCATCACAGCCTTGTTATCCTGGGAGTGGTGCATAGGGAAGGGCAGCAGTCTTCCCATCACAGCCTTGCTCTGCCATCTTTGAAATGGCC i calJac3.chr22_GL285922_random C 0 I 306 s canFam3.chr1 20069649 115 - 122678785 ------------------------------CAATGGGGGACAAAGCTTACACACATGC-ATCAGAGCAAAGTCAGAA---------------------------T---------AGCAGCGTGTAGGAATGAGCAATGGTCTTCCCCATCAGCCCCTTG-----------------------------------------------------GCTCCACCATCTTTGAAATGGCA i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=300341.000000 s hg38.chr19_GL949753v2_alt 730615 119 + 796479 CCATCACCCAAAACGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC s panTro4.chr19 59930308 118 + 63644993 C-ATCACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGTAAGAGACGGACAGTTCGGTGAAGT-GATTAAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862858 119 + 60714840 CCATTACCCAAAATGCTCCTCCTTCTGAAC-CCCAGAGCTCCACTCTGCACCCATGCTCTAGCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCAGTGGAGT-GATTAAAAGC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663083 119 + 64156825 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804111 119 + 59248254 CCAATACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCGAGGACTTTCCTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912110 119 + 51301725 CCATTACCCAAAATGCTCCTCCTCCTGAAC-GCCAGAGCTCCCCTCTGCGCCCATGCTCTATCCTCACACCAAGGACTTTCTTGGGAAGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47617617 119 + 50890351 CCGTTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAGCTCCCCTCTGCGCCCATGCTCCGTCCTCACACCGAGGACTTTCTTGGGATGAGACAGACAGTTCCGTGAAGC-GATTAAAAGC i chlSab2.chr6 C 0 T 5744 s calJac3.chr22_GL285922_random 20419 119 + 138250 CCATTACCCAAAATGCTCCTCCTCCTGAAC-CCCAGAACTCCACTCCACAGCCATGCTCCATCCTCACACCAAGGACCTTCTTGGGAAGAGACAGACAGTGTGGTGAAGC-GATGAAAAGC i calJac3.chr22_GL285922_random I 306 C 0 s canFam3.chr1 20069764 119 - 122678785 -CATTATCCAAAAACCTTATCTGTCTGCACACTCAGAGCCCACCTCCAT-CCCATCCTTGATCCTCAAACCAAGGACTTTATTTGGAAGAGTCAAGTTATCTCCTGAAGCAGACTTAAAGC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I a score=606449.000000 s hg38.chr19_GL949753v2_alt 730734 299 + 796479 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTCGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAA---------AGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- s panTro4.chr19 59930426 308 + 63644993 CTACAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAATGAGATGGTCAGTTCAGCGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAACGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTTTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTG--ACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56862977 310 + 60714840 CTATAGGCTTAGATAATGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTTACTCCCCAGTTGTGAAGACTTTGTTTGTGAATGAGACGGTCAGTTCAGCGGTGGCTTCTGAGAATTTT---AAGAATTATAAGAAAGCAA----------AACAATGTTAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATATCTCCATTCCCCTTCTGAGATATCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACTGCACAGACACTGAAGACAGACAAATTCGAAAGG-TGTAAGACTTATCTT--- i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663202 310 + 64156825 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAAAGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTAAGACTTATCTT--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804230 310 + 59248254 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGACGGTCAGTTCAGTGGTGGCTTCTGAGAATTCT---AAGAATTATAAGAACGCAA----------AACAATGTGAGGTCTTCCCCGTGGTTCCCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTTAAAAGG-TGTCAGACTTATCTT--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912229 310 + 51301725 CTATAGGCTTAGATAGTGGAAGAGAGAGCTCCGTCCTCACACTCCTTTCTGCTGAGCATGAAATGCCTGGTGACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAAACGGTCAGTTCAGTGGTGGCTTCTGGGAATTCT---AAGaattataagaaagcaa----------aacaatgtGAAGTCTTCCCCGTGGTTCTCTATATCCTCTAGATACCTCCATTCCTCTTCTGAGATGTCTAGGCTCCCTGAAACCCCTT--TCTCTGACACACACAGCGCAGACGCTGAATACAGACAGATTCGAAAGG-TGTAAGACTTATCTT--- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 20538 315 + 138250 CTCTAGGCTTAGGCAGTGGAAGAGAGAGCTCTGTCCTCACGCTCCTTTCTGCTGAGCATGCAATGCCTGGTTACTCACCAGTTGTGAAGACTTTGTTTGTGAGTGAGATGATCAGTTTACTGGTGGCCTCTGGGAATGCTCAGGAGAATTACAAGAAAGCAA----------AACAATGTTAGGTCTTCCTCGTGGCTCCCTATATCCCCTAGATACCTCCATTGCCCTTGTGAAATATCTAGGCTCCCTGAAACCCCTTTCTCTCTGACGGACACTGCACAGACATTGAAGACAGACAAATTCAAAATG-TATAAGACttttttt--- i calJac3.chr22_GL285922_random C 0 I 8591 s canFam3.chr1 20069883 305 - 122678785 CTACGGCCTTAGATGATGAAAGAGAAA--TCTATCTACATACTCCTTTCTACTGGGTTCCGAGTGCCTGATTACTCACCAATTGTGGAGCTCTTGTTGAGGTGCAAGTTGCTCTGTTTTCTGGAGGCTTCTGGGAATTCT---AAG-----CAAGAGGGTAATGAGAACATGGATAACATCAGATCTTCCCAGTGAGTCCCTAC------------TCTGCATACCCTTTCTGAGCTGTCTGGGCTTCCCAGAACCCCTT--TCTCTGGCACACACTGCATGAACACTGAGGAGAGAAAAAAGCAGAGGGCTATAAGACATGTTCTCTT i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=273656.000000 s hg38.chr19_GL949753v2_alt 731033 217 + 796479 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacacttggttttttttccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaactaccag s panTro4.chr19 59930734 216 + 63644993 ----CCATGACCGGCTTAGTAAGAAGCAGatccgttcagcaattgatagacccttgggtttttt-ccacgttttgctgttatgaatattgctgctgtgaacattgacgtacaggtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggggtggtggaatcactgggtcatacagtaactctgtgttttac------------tttttgaagaaccaccag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863287 211 + 60714840 ----CCATGACTGGCTTAGTAAGAAGCAGatccgttcatcaattgatagacacttgggttt----ccacgttttgttgttatgaatattgctgctgt-aacactgacatacaagtttttgtgtgaacataagttttctgttctctt----------gggtacacacccaggtgtggcagaattactgggtcatacagtaactctgtgttttac-------------ttttgaagaactaccag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60663512 223 + 64156825 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcataagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804540 223 + 59248254 ----CCATCGCCGGCTGAGTAAGAAGCAGatctgttcatcagttgctgggcacttgggtttttt-ccacgttttgctattgtgaatattgctgctgtgaacattcacatacaagtttttgtgtgatcagaagttttctgttctctt----------gggcacacacccaggtgtgattgaatcactgggtcatagagtaactctgtgttttacttttta-----ctttttgaaaaactaccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912539 223 + 51301725 ----CCATCGCCGGCTGAGTAAGAAGCAGATccgttcatcagttgatgggcacttgggttttTC-CCacattttgctattatgaatattgCTGCTGTGAACGTtcacatacaagtttttgtgtgatcATAAGTTTTCTGTTCTCTT----------GGGTACACACCCAGGGCTGATTGAATCACTGGGTCATAGAGTAActctgtgttttacttttta-----ctttttgaaaaactaccag i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070188 237 - 122678785 CTATCTCTCAGTGGGTGCATAAGAAATGAatccattcatccactgatggacattacattatctc-ctttttggggctactatgaataatgttgccatgaacatttatgtacacatttt--tatgaacatgcattttttaatttcttaatttggggggagcatatagctacaagtg---gaatagctgagtcctgtgataattttatgatatggtcataggatattcttttgaggaaatgctga i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=113444.000000 s hg38.chr19_GL949753v2_alt 731250 109 + 796479 act-tctttcttttttttct-------------------------tt--tttttttttttttgagacagagtctcattctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct s panTro4.chr19 59930950 102 + 63644993 act-tgtttctttttttt----------------------------------ttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56863498 91 + 60714840 act-ttt---------------------------------------------ttctttttttgagacgaagtctcattctgttgcccaggctggagtacagtggcgcaatctcagctcactgcaacctccacctcct i ponAbe2.chr19 C 0 I 9605 s rheMac3.chr19 60663735 131 + 64156825 actgtttttctttcttttcttttcttttttttctttttctt----tt--tttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804763 135 + 59248254 actgTttttctttcttttcttttcttttttttctttttctttttctt--ttcttttttttttgagacggagtctcgttctgttgcccaggctggagtgcaatggcgcgatctcagctcactgcaagctccgcctccc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912762 137 + 51301725 actgtttttctttcttttctttttttttttttctttttctttttctttgtttttttttttttgagacggagtctcgttctgttgcccaggctggagtgcagtggcgcgatctcagctcgctgcaacctccacctccc i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=267724.000000 s hg38.chr19_GL949753v2_alt 731359 205 + 796479 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcacctgccatcacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatccaccctccttggcctctcaaagtgctgggattacaggctgcgcctggccacag s panTro4.chr19 59931052 205 + 63644993 gggttcaagcgattctcctccctcagcctcccgagtagctgggattacaggcatctgccaccacgcctggccaacttttttttttgtactttagtagaggcggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgcctggccacag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873194 204 + 60714840 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccggccaac-tctttttttgtactttagtagaggcggggtttcaccatgttggcccggatggtctcaatctcctgacctcatgatccaccctcctcggcctctcaaagtgctgggattacaggctgcgcctggccacag i ponAbe2.chr19 I 9605 C 0 s rheMac3.chr19 60663866 204 + 64156825 gggttcacgcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55804898 204 + 59248254 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgcccgccaccatgcccggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggatgacaggctgcgcctggccacag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47912899 204 + 51301725 gggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgcctggccaac-tttttttttgtactttagtagagattgggtttcaccatgtcggccaggatggtctcgatctcctgaccttgtgatccaccctcctcagcctctcaaagtgctgggattacaggctgcgCCTGGCCACAG i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20070425 0 - 122678785 C e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=174098.000000 s hg38.chr19_GL949753v2_alt 731564 121 + 796479 actgtttttcaaagcagctgcaccattttatattcccaccagcaatataagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag s panTro4.chr19 59931257 121 + 63644993 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaatcctcaccaatacttcttgt------------------ccgtttgttttgttttaaaaatcatagtcatcctag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873398 120 + 60714840 actgtttttcaaagcagctgcaccattttatattcccaccagcaatacaagaaggttc------ttccaaat-ctcaccaatacttctcgt------------------ctgtttgttttgttttaataatcacagtcatcctag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664070 121 + 64156825 actgtttttcaaggcagctgcaccattttatattcccaccagcaatacaggaaagttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805102 119 + 59248254 actgtttttcaaggcagctgcaccattttatattcccaccag--atacaggaaggttc------ttccaaatcctcaccaatacttcctgt------------------ccgtttgttttattttaacaatcacagccatcctag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913103 121 + 51301725 ACTGTTTTTCAaggcagctgcaccattttatattcccaccagcaatacagGAAGGTTC------TTCCAAATCCTCACCAATACTTCTTGT------------------ccgtttgttttattttaataatcacaGCCATCCTAG i papAnu2.chr19 C 0 C 0 s canFam3.chr1 20070425 145 - 122678785 actgttttccacagcagcaacatgatgtttcattcccatcaacaatgtgtgggggttccaatttccccacatcctcaacaatacctgttgttgtacttaattattactattattattattattattattattattgccattctgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 20853 8591 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=127637.000000 s hg38.chr19_GL949753v2_alt 731685 78 + 796479 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagcc s panTro4.chr19 59931378 78 + 63644993 ttggcatggtgaattttatggtatgtgaattatatctcagtttgaataataagatgtggatccatgtcttcgtgagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873518 78 + 60714840 ttggcatggtgaattttatggtatgtgaattagatctcaatttgaataatcagatgtggatccatgtcttcatgagct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664191 78 + 64156825 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55805221 78 + 59248254 ttggcatgGTCCATTTTATGGTATGTGGATTATATCTCAGTTTGAAGAAGAATAAGTGGATCCACATCTTCACGAGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913224 78 + 51301725 TTAGCATGGTACATTTTATGGTATGTGGATTATATCTCAATTTGAAGAAGAATAAGTGGATCCGCATCTTCATGAGCT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29444 78 + 138250 TCGGCATGGTAAATTTTATGGTATGTGAGTTATAACTGAATTTGAAGAAGACGACGTGGGCCAGCATTTTCATGAGCT i calJac3.chr22_GL285922_random I 8591 C 0 s canFam3.chr1 20070570 71 - 122678785 tgggtgtgatgaatttcatggtttGTGA--CATATCTAAATTTAAAAAATAAGTAgagg-----tgccttggtggttc i canFam3.chr1 C 0 I 70 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=501.000000 s hg38.chr19_GL949753v2_alt 731763 1 + 796479 t s panTro4.chr19 59931456 1 + 63644993 t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873596 1 + 60714840 t i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664269 1 + 64156825 C i rheMac3.chr19 C 0 I 3 s macFas5.chr19 55805299 1 + 59248254 C i macFas5.chr19 C 0 I 334 s papAnu2.chr19 47913302 1 + 51301725 C i papAnu2.chr19 C 0 I 347 s calJac3.chr22_GL285922_random 29522 1 + 138250 C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=51255.000000 s hg38.chr19_GL949753v2_alt 731764 32 + 796479 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA s panTro4.chr19 59931457 32 + 63644993 aGAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873597 32 + 60714840 aCAGGAAGAATGAGCTCGCGTTAGCCTCAGAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664273 32 + 64156825 TTAGGAAGAATGAGCTCGTGTTAGCCTCAGAA i rheMac3.chr19 I 3 I 354 s macFas5.chr19 55805634 32 + 59248254 aaaaaaagaaTGAGCTTGTGTTAGCCTCAGAA i macFas5.chr19 I 334 C 0 s papAnu2.chr19 47913650 32 + 51301725 aaaaaaagaatgagcttgTGTTAGCCTCAGAA i papAnu2.chr19 I 347 C 0 s calJac3.chr22_GL285922_random 29523 32 + 138250 AGAGGAAAAATGAGCTCATATTAGCCTCTGAA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T a score=27271.000000 s hg38.chr19_GL949753v2_alt 731796 24 + 796479 CACGGGATCTCCACCTTCCAACTT s panTro4.chr19 59931489 24 + 63644993 CACGGGATCTCCACCTTCCAACTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873629 24 + 60714840 CACGGGATCGCCACCTTCCTACTT i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55805666 24 + 59248254 CATGGGATCTCCACCTTCCTACTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913682 24 + 51301725 CATGGGATCTCCACCTTCCTACTT i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29555 24 + 138250 CACAGGATATCTACCTTCCTACTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e rheMac3.chr19 60664305 354 + 64156825 I a score=30953.000000 s hg38.chr19_GL949753v2_alt 731820 84 + 796479 AGGCCAttttctttttttcttttt-----ttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggtgcaat s panTro4.chr19 59931513 89 + 63644993 AGGCCATTTTCtttttctctttttcttttttttttttttttgagacagagtcttactc-tgtcgtccaggctggagtgcagtggcgcaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873653 85 + 60714840 AGGCCAttttcttttttttttttt----tttttttttttttgagacagagtctcactc-tgtcgtccgggctgaagtgcagtggcgcgat i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29579 69 + 138250 AGACCAtt---------------------ttttttttttttgagatggagtttcgctcttgttgcccaggctggagtgtaatggcacaat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20070641 70 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=99251.000000 s hg38.chr19_GL949753v2_alt 731904 234 + 796479 ctcggctcactgcaagctctgcctcccgggttcacaccattatcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---cgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggaatacaggcgtgagccaccgcgcccggcc s panTro4.chr19 59931602 234 + 63644993 ctcggctcactgcaagctccgcctcccgggttcacaccattgtcctgcctcagcctcccgagtagctggaactacaggcacccgccaccacgcctggctaatttttttgtattttcagtagagatggggtttcaccgtgttagccaggatggtct---tgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873738 233 + 60714840 cttggctcactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcctggctaa-ttttttgtatttttagtggagatggagtttcaccgtgttggccaggatggtct---cgatttcctgacctcgtgatccaccctcctcggcctcccaaagtgctgggattacaggcatgagccaccgcacacagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 29648 233 + 138250 ctcggctcactgcaacctctgccttctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgcaccaccatgcccagctaa-ttttttgtatttttagtagagacggggtttcaccatgttgaccagggtggtct---ggatctgttgacctcgtgatccacccgcctcggcctcccaaagtgctgggtttacaggcttgagccaccgcgcctggcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20070711 142 - 122678785 ccctgctcagtggggactctatctccc--------------------tctccatctccc-----tctgtgatctc-----------------tctggctct--------cattctcaa-agtgaatcagtatatctgtacaaGCTCAG-TGGTTTATGCCATCTTCTGAGTGTAAGAGGCTCC--------CCTCCTTA----------TTA------------------------- i canFam3.chr1 I 70 C 0 e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47617736 5744 + 50890351 T e papAnu2.chr19 47913706 0 + 51301725 C e macFas5.chr19 55805690 0 + 59248254 C e rheMac3.chr19 60664305 354 + 64156825 I a score=547849.000000 s hg38.chr19_GL949753v2_alt 732138 234 + 796479 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGAAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTT-----TTTT s panTro4.chr19 59931836 239 + 63644993 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGAGGCCACCAAAATA-TTCCTGAACTGCCTCAGCTGATAAATACGAAGCTCTTGT-TGCAGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAAGCAGCTTGGCAAAAACTAGTTTATGCTCAGCTCTCGGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTATTTCTCTTCGTGTGAGATGCATTAATAAACCTTGTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56873971 237 + 60714840 AGGCCATTTTCTTAACCAGGGGCCTCC-------TGTGGCCACCAAAATATTTCCTGAACTGCCTCAGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACTATCCTGG-GAGTCTTTTTATGGTGGAACCAGCTTGGCAACAACTACTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAACCTTGT---TTCT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664659 237 + 64156825 AGGCCGTTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i rheMac3.chr19 I 354 C 0 s macFas5.chr19 55805690 237 + 59248254 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCGGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTACTTCTCTTCCTGTGAGATGCATTAATAAGCCttgt---ttct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47913706 229 + 51301725 AGGCCATTTTCTTAACCAGGGACCTCC-------TGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTT----GTGGTGGGTACCATCCTGG-GAGTCTTTTTATGGTGGACCTAGCTCTGCAAAACCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATaagccttgt---ttct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47611992 219 + 50890351 AGGCCATTTTCTTAACCAGGGACCTCC-------CGTGGCCACCAAAATGTTTCCTGAACTGCCTCGGCTGATAAATATGAAGCTCTTGT-GGTGGTGGGTACCATCCTGG-GAGTCTGTTTACGGTGGACC-------------CCTAGTTTATGCTCAGCTCTCTGTGGCATAATGAGAGTGTGGGTATTATTTGGTCTTTGTTA-----CTTCCTGTGAGATGCATTAATAAGCCTTGT---TTCT i chlSab2.chr6 T 5744 C 0 s calJac3.chr22_GL285922_random 29881 206 + 138250 AGACCATTTCCTTAACCAGGGAGCTTC-------TGTAGC-----------TTC-----------------ATACATATTAAGCCCTTGT-TGCAGTGGGTACCATTTTGG-GAGTCTTTTTATGGTGGAACCAGCTCAGCAAAACCTAATTTATGCTCAGCTGTC--TGGCATAATGATAGTGTGGGTATTATTTGGTCTTTGTTCCTTCTCTTCCTGTGAGATGCATTAATAAGCCTTGT---TTt- i calJac3.chr22_GL285922_random C 0 I 2030 s canFam3.chr1 20070853 233 - 122678785 AGGCCATTTTCTTATCCAGGGACTGCCCTGGTTACATGGACACCAAAACATTTCCTAAAAACCTTCAACCTATAAATATGTAGCTCCTATCAAGAGTGGGGACTATCTTGGTGGGCCTTTTTATGGTAAAACCAGCTCATCAAAGCCTAC-----------CTATCTGTGGTATAATAAGAGCTTGCATATTATTTGTTCTCTGTTATTTCTCTTCCTGTAAGTCTCATTTATAAATTTTGT---TT-- i canFam3.chr1 C 0 I 8353 e nomLeu3.chr10 103362684 100 - 106955855 I a score=6248.000000 s hg38.chr19_GL949753v2_alt 732372 8 + 796479 Tttttttt s panTro4.chr19 59932075 8 + 63644993 Tttttttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874208 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664896 6 + 64156825 TTTTTt-- i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55805927 6 + 59248254 tttttt-- i macFas5.chr19 C 0 I 953 s papAnu2.chr19 47913935 6 + 51301725 tttttt-- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47612211 6 + 50890351 TTtttt-- i chlSab2.chr6 C 0 I 3 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I a score=72712.000000 s hg38.chr19_GL949753v2_alt 732380 67 + 796479 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg s panTro4.chr19 59932083 67 + 63644993 caattaaaatt-----tcagttccagaatccatgtgcaggacgtgcaggtttgttacataggtaaacgtgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874216 67 + 60714840 aaattaaaatt-----taagttccagaatccatgtgcaggatgtgcaggtttgttacacaggtaaacgtgtg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60664908 69 + 64156825 taattaaaattta---taagttacaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgtgtg i rheMac3.chr19 I 6 I 893 s papAnu2.chr19 47913947 69 + 51301725 taattaaaatttattttaagttccaggatccatgtgcaggaggtgcaggtttgttacacaggtaaacgt--- i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47612220 69 + 50890351 aaattaaaatgtattttaagttccaggatccatgtgcgggaggtgcaggtttgttacacaggtaaacgt--- i chlSab2.chr6 I 3 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I a score=445864.000000 s hg38.chr19_GL949753v2_alt 732447 544 + 796479 ccatggtggtttgctgcacccatcaacccatcacctaggtattaagccccacacgcatcagctatttatcctgatcctctccctcccccaatt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtg-tttggttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtactgtatttgctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcgcagtggctcacacatgtaatcccagcactttgggaggccgaggtgggcagatc s panTro4.chr19 59932150 545 + 63644993 ccatggtggtttgctgcacccatcaacccatcacctaggtattaaaccccacacgcatcagctatttatcctgatcctctccctcccccagtt-ccccctacaggccccagtgtgtggtgttcccctccctgtgtccatgtgatctcattgttcagctgccacttacaagtgagaacatgcagtggtttgcttttcagttcctgtgttagtttgctgaggataatgttttccagctccatccatgtccctgcaaaggacatgatctcattcctttttatggctgcatagtattccatggtgtatatgtaccgtattttctttatcctttctatcattgatgggcatttgggttgattccttgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatggtatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874283 541 + 60714840 ccatggtggtttgctgcacccatcaacccatcacccaggtatcaagcgccacacacatcagctgtttatcctgatcctctccctcccccag---cccccgacaggccccggggtgt-gtgctcccctccctgtgtccacgtgttctcattgttcagctcccacttacaagtgagaacatgcagtg-tttgctttcctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacgtgatctcattcctttttatggctgcatagtattccatggtgtacatgtaccgtattttctttatccagtctatcattgatgggcatttgggttgattccttgtttttgctattgtgaatagtgctgcaatgaacatatgtgtgcatg-tatctttataatacaatgatttatattcctttgggtatataaccagtaatgggattgctgggtcaaatgatatttctggccaggcacagtggctcacacctgtaatcccagcactttgggaggccgaggtgggcagatc i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914016 540 + 51301725 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccaCACGcgttagctatttttcctgatcctctccctcccctgactcccccctacaggccccagtgtgtgttgttcccctccctgtgtccatgtgttctcattgttcagctcccacttacaagtgagaaagtgtggta-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccatccatgtccctgcaaaggacatgacctcattcctttttatggctgcatagtattccatgctgtgtatgtaccatattttctttatgcagtctgtcattgatgggcatttgggttgattctatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcatgttatctttataatacaatgatttatatgcttttggatatataaccagtaatgggattgctgggtcaaatggtatttctgaccgggtgcagtggctcacacctgtaatcccagcactctgggaggccgaggtgggcagatc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47612289 539 + 50890351 -----gtggtttgctgcacccatcaa-ccatcacctaggtattaaaccccacacgcgttagctctttttcctgatcctctccctcccctgact-ccccctacaggccccagtgtgtgttgttcccctccctatgtccacgtgttctcattgttcagctcccacttacaagtgagaaagtgtggtg-tttgcttttctgttcttgcgttagtttgctgaggataatggcttccagctccattcatgtccctgcaaaggacatgacctcattcctttttagggctgcatagtattccatgctgtgtatgtactatattttctttatgcagcctgtcattgatgggcatttgggtagattccatgtctttgctattgtgaatagtgctgcaatgaacatatgtgtgcgtgttatctttataatacaatgatttatatgcctttggatatataaccagtaatgggattgctgggtcaaatggtatttctgACGgggtgcagtggctctcacctgtaatcccagcactctgggaggccgaggtgggcagatc i chlSab2.chr6 C 0 I 5309 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11142.000000 s hg38.chr19_GL949753v2_alt 732991 22 + 796479 acctgaggtcaggagctcaaga s panTro4.chr19 59932695 22 + 63644993 acctgaggtcaggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56874824 22 + 60714840 acctgaggtcaggagcttgaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47914556 22 + 51301725 gcctgaggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=91206.000000 s hg38.chr19_GL949753v2_alt 733013 371 + 796479 ccaccctggccaacatggtgaaactcccgtctctagcaaaaatccaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcacttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---aaaaaaaaaaaaaaaaaaaaaaGGTGGCcctgg-tgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaaaaaaaaaaaaaa---agccagg s panTro4.chr19 59932717 369 + 63644993 ccaccctggccaacatggtgaaactcccatctctatcaaaaatacaaaaattagccaggcgttgtggcatgcacctgcagtcccagctactcgggaggctgaggcaggagaatcgcttgaaccctggaggcagaggctgcagtgagccgagatcatgcccctgcaatccagcctgggtgacagagtgagactctgttt---ttaaaaaaaaaaaaaaaaaaaaGGTggcccggggtgcggtggctcacgcctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcagaagtttgagaccagcatgaccaacaaggtaaaaccccatctctactaaaagaaa---aaaaaaaaa---aaccaag i panTro4.chr19 C 0 I 78 s ponAbe2.chr19 56874846 377 + 60714840 gcacgctggccaacatggtgaaactcccctctctatcaaaaatacaaaaattagccaggcgtggtggcatgcacctgcagtcccagctagtcgggaggctgaggcaggaaaatcgcttgaaccctggaggcagaggctgcagtgggtcgagatcataccactgcaatccagcctgggtgacacagtgagactctgtttggaaaaaaaaaaaaaaaaaaaaaaaaGCTggccggg-tgcggtggctcacgcctgtaatcccagcactttgagaggccaaggcgggtggatcacctgaggtcagaagtttgaaaccagcgtgaccaacaaggtgaaaccccatctctattaaaaaaaaaaaaaaaaaaaaattagccagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=6888.000000 s hg38.chr19_GL949753v2_alt 733384 77 + 796479 catggtggcaggcgcctgtagtcccagttacttaggaggctgagacaggataattgcttgaacctgggaggtggagg s ponAbe2.chr19 56875223 77 + 60714840 catggtggtaggtgcctgtggtcccagctacttaggaggctgagacaggataattgcttgaacctgggaggtggagg i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I e panTro4.chr19 59933086 78 + 63644993 I a score=47222.000000 s hg38.chr19_GL949753v2_alt 733461 201 + 796479 ttgcagtgagccgagatcgcaccactgcactccagcatgggctattgagcaatactacatctcaaaaaaaaaaaaaa--------ggaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt s panTro4.chr19 59933164 209 + 63644993 tccccgtgacccaagattgccccccccccctccagcatggggtattgagcaagactatttttcaaaaaaaaaaaaaaaaaaaaaaggaaaaaggatttctggttttgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcgccagcacctgtt i panTro4.chr19 I 78 C 0 s ponAbe2.chr19 56875300 202 + 60714840 ttgcagtgagccaagatcgcaccactgcactccagcatgggctattgagcaagactccatctaaaaaaaaaaagaaa-------caaaaaaaggatttctggttctgggtctttgaggaatcaccacactgtcttccacaatgaactaatttacattcccaacagtgtaaaagcattcctatttctccacagcctcaccagcatctgtt i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=26089.000000 s hg38.chr19_GL949753v2_alt 733662 317 + 796479 gtttcttgacttttgttggttttttttttttttttttgagatggagtcttgctctgtcgcccaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctcccgaatagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatctgcctgcctcggcctcccaaagtgctgggattaccggcgtgagccaccgtgcccggc s panTro4.chr19 59933373 313 + 63644993 gttttttgacttttttt---tttttttttttttttttgagatggagtctcactctgtcgcccaggctggagtgcagtggcgcaatcttggctcaccgcaacctctgcctcctgggttcacgccattctcctgcctcagcatcccgagtagctggtactagaagtgcccgccaccacgtccggctaattttttgtatttttag-agagacggggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaagtgctgggattaccggcgtgagccaccacgcccggc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e ponAbe2.chr19 56875502 0 + 60714840 C e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=223394.000000 s hg38.chr19_GL949753v2_alt 733979 872 + 796479 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctaaatgtggttttgatttgcatttctctaatgattggtgatgttgagcttttttttgtatgtttactggctgcataaacgtcttcttttgagaagtgactgttcatgtcctttacccactttttaatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaacattttctcccattctgtaggttgtctgttcactctgatgatactttcttttgctgagcagaagctctttagtttagttagatcccatttgtcagtttttgcttttgttacaattgcttttgacgtttttgtcatgaaatctttgcccatgcctgtgtcctgaatggtattacctagattttcttctagggtttttatagttttcgggttttgcatccaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaacgggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccaggataatcaggcaagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat s panTro4.chr19 59933686 871 + 63644993 gtttcttgactttttaataatcgccattttgaactggtgtgagatggtgtctcaatgtggttttgatttgcgtttctctaatgattggtgatgttgagcttttttcggtatgtttactggccgcatgaacgtcttcttttgagaagtgactgttcatgtcgtttacccactattttatggttttttttttcttgtaaatttgtttaacttccttgtagattctggatattagacttttgtga-attgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttggtttagttagatcccatttgtcagtgtttgcttttgttacaattgcttttgacatttttgtcatgaactctttgcctgtgcctgtgtcctgaatggtattacctagattttcttctagagtttttatagttt-cgggttttgcatctaagtctttcatccatcttgagttaatttttgtacaaggtgtaaggaaagggtccagtttctattttctgcatatggctagccaattctcccagcaccatttattaacccacagccaatttcatactaaatgggcatttcccttgaaaaccagcacaagacaaggatgccctctttcaccactcctattcaacagagtattagaagttctggccaggataatcag-caagagaaagaaataaaggatactcaaataggaagagaggaaatcaaactatctctgtttgcagatgacatgatcctatatctagaaaaccccatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56875502 863 + 60714840 gtttcttgactttttaataatcgccattttga-ctggtgtgagatggtgtctcaatgtggttttgatttgcatttctctaatgattggtgatgttcagctttttttcatatgtttactagccacgtaaacatcttcttttgagaagtgatcgttcatgtcctttgcccactttttaa-----ttttttttcttataaatttgtttaacttccttgtagattctgaatattagacttttgtgagattgatagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagtttcttttgctgagcagaagctctttagtttatttagatcccatttgtcagtttttgcttttgttacaattgcttttgacatttttgtcatgaaatctttgcctgtgcctatgtcctgaatggtattacctagattttcttctagagtttttatagttt-tgggttttgcatttaagtctttaatccatcttgagttaatttttgtataaggtgtaaggaaagggtccagtttctattttctgcacatggctagccaattctcccagcacc----attaacccacagctaatttcatactaaataggcatttcctttgaaaaccaacacaagacaaggatgccctctttcaccactcctattcaacatagtattggaagttctggccagaataatcaggcaagagaaagaaataaaggatattcaaataggaagagaggaaatcaaactatctgtctttgcagatgacatgatcctatatctagaaaaccctatcatctcagcccaaaagtttcttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaat i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 30087 2030 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=475729.000000 s hg38.chr19_GL949753v2_alt 734851 991 + 796479 cacaagcattcctatacaccaacaatagacaggcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaacta---taaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaacaaagctggaggcctcaggct--cagacttcagactatattacaaggtgatagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatttgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcctgctcccaccacatgagacagctaccccctctttgccttctgccatgactgtaagcttcctgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaaac------ctcttttctt s panTro4.chr19 59934557 988 + 63644993 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcggacacaaacaaatggaaaaacattccatgctcatggataggatgaatcaatatcgtgaaaatggccatactgcccaaagtaatttatagattcattgctattcccattgaactatcattgacattcctcacacaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatactaagcaaaaagaagaaagctggaggcctcaggct--cagacttcagactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagatctcagaaataagaccacacatctacaaccatctgatcttcaacaaacctgacaaaaacaaacaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAACACAGCGtgt--ggtatgtgcatgccatgtgatacagtttgaatatgtgttcccaccaaatctcatactggattatga-tccccaatgttggaggtgggggcctggtggggggtgtttggatcataggggtggatccctc-attgcttggtgctttccttgcaatagtaagtgaattctcacaagatctggctattgcaaagtgtggcatgtcccccagtcccaactctctctctctcttgctcct------accacgtgagacagctaccccctctttgccttctgccatgactgtaagcttcttgaggcctccccaaaagcagaagccagccttctgcttcctatacggccttcagaaccatgaaccaattaagc------ctcttttctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56876365 991 + 60714840 cacaagcattcctatacaccaacaatagacaagcagagagccaaatcaagaaggaactcccattcacaattgctacaaacagaataaaatacctaggaatacagctaacaaggaaagtgaaggacatcttcaaggagaactacaattcactgctcaagaaaatcagagcagacacaaacaaatggaaaaacattccatgctcatggataggacgaatcaatatcatgaaaatggccatactgcccaaactaatttatagatttgttgctattcccattgaactatcactgacatttctcacagaattag--aaaaaactactttaaaattcatatggaaccaaaaaagggcccatatagccaagacaatcctaagcaaaaagaacaaagctggaggcatcaggct--cagacttcaaactatactacaaggtgacagtaaccaaaacagcatggtactggtacaaaaacagacac--agaccaatggaacagaatagagatctcagaaataagaccacacacctacaaccatctaatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataCACCTTGTTTTGATTTTGATTTCAATACAGTGTGT--GGTATGAGCATGCCATGtgatacagtttgaatatacgttcccaccaaatctcatactggattatga-tccccagtgttggaggtgggggccgggtgggaggtgtttggatcataggggtggatccctc-attgcttggtgctttctttgcaatggtaagtgaattctcacaagatctggctattgcaaagtgtggcacgtcccccagtcccaactctctctctctcttgctcctgctcccaccacgtgagacagctacccaccctttgccttctgccatgactgtaagcttcctgaggcctccccgaaaccagaagccagccttctg-ttcctatacagccttcagaaccgtgaaccaattaaac------ctcttttctt i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 32117 977 + 138250 cacaagcatttctatacactaacagtagacaagcagagagccaaatcatgaaggaactcccattcacaattgctacaaaaagaataaaatacctaggaatacagctaataagtgaaacggaggacatcttcaagg------------------------aaatcagagaggatacaaacaaatggaaaaacattccac-ttcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattaattgttagtcccattgaactatgattgacattcttcacagaattagaaaaaaaactactttaaaattcatatggaaccaaaaaaggacccatatagccaagacaatcctaagcaaaaagaacaaagctggaagcatcaggctgccagacttcaaactatactacgaggtgacagtaaccaaaacagaatggtactgctac-aaaacagacacatagaccaatggaacagaatagaaatctcagaagtaagaccacacatttacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaagtattccctacttaataaGCCTTGTTTTGACTTTGATTTAAACTCAGTGTGTTAGGTATGTGCATGCCATGTGat--agtttgaatatacatgcccgccaaaccccatattggattatgaccccccactgttggagat-ggggcctggtgggaggtatttgaatcatgggggtggatccctcaattgcttggtgctgtcctcacaatagtgagtgaattctcacaacatgtgactattgcaaagtgtggcacatcctccagtcccaa--ttttctctctcttgctccttctcccagcatgtgagacacctgctccctcttcaccttctgccatgattgtaagcttcctgaggcctccccaaaagcagatgccagccttctgcttcctatacagccttcagaaccatgaaccaattaaacacctctttcttttctt i calJac3.chr22_GL285922_random I 2030 I 593 e canFam3.chr1 20071086 8353 - 122678785 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=149709.000000 s hg38.chr19_GL949753v2_alt 735842 548 + 796479 atcaatgatccagtctcagatatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtaggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgactgcggtgatggtgacgcgaatctacaactgtgacaaattggcatagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactctaattacgtaagatgtaaccattagaggaaactggaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga s panTro4.chr19 59935545 548 + 63644993 atcaatgatccagtctcaggtatttatagcagcacaaaatcggcctaatatagcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgggcctcaggggcattgcactgagtgacaaaaggatatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaacaaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcggtgatggtgacacaaatctacaactgtgacaaattggcatagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactctaattatgtaagatgtaactattaggggaaactgaaaaaagagcacatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877356 548 + 60714840 atcaataatccagtctcaggtatttatagcagcacaaaaccagcctaatacaGcatgaaatattgctcagcaatcaaaaggaacacatcattgatacatacagcagcttggatgtgcctcaggggcattgcactgagtgacaaaagggtatctcaaacggttgcatactggatgatcccatttacatcagattctagaaatggaagattatagagatggagaaccaattaatggataccaggagttagggatggcaagggaaggagaagggtgtgggtgtgaatataaaagggtagcccaagggaggcccttgtgagacggaagagttctgtacagtgaatgcagtgatggtgacacgaatctacaactgtgacaaattggcacagaactagacacCTACTttatgccaatgtcaaattcctggtttttatgttgtactgtaattatgtaagatgtaaccattaggggaaactggaaaaagagcagatgggattcttctgttctatcattgtagacttcctgtgactctagaaccatttcaaaagaga i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e nomLeu3.chr10 103362684 100 - 106955855 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=11514.000000 s hg38.chr19_GL949753v2_alt 736390 102 + 796479 aagttcaaaaaTTCAGTCAGAAGCACACGCACACATATGCACGCATGCACACACACA---------CATATGCACGCATGCAC------------ACACATATGCA-----------------------------------CGCACACA------------CACATATGC s panTro4.chr19 59936093 170 + 63644993 aagttcaaaaaTTCAGTCAGAAgcacacgcgcacacatgcacgcatgcacacacacatgcatgccacacatgcacacatgcacgcacacacacgcacacatatgcatgccgcacacacgcacacatacgcacgcgcgcacacgcacacatgcacgcatgcacacatatgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877904 49 + 60714840 aagttcaaaaaTCCAGTCAGAAGcacacgc-----------------------------------------------------------------acacatatgcg-----------------------------------tgcacaca--------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362784 50 - 106955855 AAGTTCAAAAATTCAGTCAGAAGCACACGC-----------------------------------------------------------------ACACATATGCA-----------------------------------CGCATGCA--------------------C i nomLeu3.chr10 I 100 C 0 e canFam3.chr1 20071086 8353 - 122678785 I e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=120289.000000 s hg38.chr19_GL949753v2_alt 736492 216 + 796479 ACGCA---------------------CACACGCACA----TGCACGCACACACACATATGCACGCACACAGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCTCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA s panTro4.chr19 59936263 241 + 63644993 acgcatgcacacacacatgcatgccacacacgcacacatatgcacgcacacacgcacatgcacacacacaGTATGTGACCATCTTCCATGTCCCTGCCCACTAGGCATAATAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACGCCCAGCCTCCAGCCTA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56877953 190 + 60714840 --------------------------cacacgcaca----tgcatg--------------------cacaGTGTGTGACCATCCTCCATGTCCCTGCCCACTGGGCATAACGGCCC-CATTCTGCCCTCAACCCCGCGAATCT---CATCCTTATCAACCTCGGCTCTTTCTAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACATGCCCAGCCTCCAGCCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103362834 220 - 106955855 ACACA---------------------CACACGCACACATATGCACGCACACGCGTACATGCACGCACACAGTATGTGACCATCTTCCATGTCCTTGCCCACTGGGCATAGTAGCCCCCACTCTGCCCTCAACCCCGCAAATCT---CATCCTTATCAACCTCGGCTCTTTCCAGCATGTTTCTCCTGCCTTGG----TGCTTCACTCTGAGACACAGGGAATGTTAGACACACCCAGCCTCCAGCCTA i nomLeu3.chr10 C 0 I 302 s canFam3.chr1 20079439 195 - 122678785 -------------------------ACATGCACACACATGTGGGTGCATGCATACACATACACACATATAGTGTGC--------------------CTCATTTAGCATGACAGCCCCCATACTGCCCTCAGCCACACATGTCTGCACATTCTTGTCCAACTTGGCTCTTTTCAACATGCTTCTGTTCCTTTGGATTTGGGTCTACCCTGAG--ACAGGGAGTGTTAGAGATGCC------ACAGATCA i canFam3.chr1 I 8353 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=303527.000000 s hg38.chr19_GL949753v2_alt 736708 530 + 796479 GCGTATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcattctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctattctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCATTCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttggttggttggttggttggttggttAGTTTGTT--------TGTTTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA s panTro4.chr19 59936504 538 + 63644993 GCATATGATATTCTTAAAGTGCAGGCCGTAGTCTGGTACACCGTATTCAGCTGAGATGTTTGTGAAAGTGGAGGGGATAACACGCCTCACACAAAACTTACCGcagtggttctcaaagcagcatcctggagcca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccgggtgattcttatgctcatggaagtttgagaaccgctgATCAATGCAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACAggtttgttggttagttggttggttggttggttggttagttagttagttagtttgttTTTGTCGCCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCATGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGCGGCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878143 513 + 60714840 GTGTATAATATTCTTAAAGTGCAGGCCGTAGTCCGGTACACCATATTCAGCTGACATGCTTTTGAAAGTGGAGGGGGTAGCACGCCTCACACAAAACTTACCAcagtggttctcaaagtggcatcctggag-ca-tagcatcagcatcacctgggaacttactaggaatgaaaatgactgga-tccaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgctcatggaagtttgagaaccgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCGGACTCTACA----------------ggttggttggttggttagttagtttgtt--------tgttTTTGTCACCCATATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCCGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCCAGAGTAGGATTG------------GGGGCAGCATCTTAACATCTAACTACTTAGGACACTCACCCTGTTTACAGGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363356 516 - 106955855 GCGTATGATATTCTTAAAGTGCAGGCCATAGTCCAGTACACCGTATTCAGCTGAGATGCTTTTGAAAGTGGAGGGGACAGCACACCT-ACACAAAACTTACTGcagtggttctcaaagcggcatcctgg-gcca-tagcatcagcatcacctgggaacttactaggactgaaaatgactgga-ttcaccccagacctactgaagcagaagccctgggggctcagaaatctgttctttaagcctccaggtgattcttatgcccatggaaatttgagaactgctgATCAATGGAATCAGTGACTCAGAAACAGAGTCCCAGACTCTACAggtt------------ggttggttggttggttggttggttggtt--------ggttTTTGTCACCCACATTCAACCAGCTGGACTCCACAGTATAGCAAGCCACTCTGATTATTCTTCTGCGTGTTATATGTGATAAACCATCCACCTAGAGTAGGATTG------------GGGGTACCATCTTAACATCTAACTACTTAGGACACCCACCCTGTTTACAGGCA i nomLeu3.chr10 I 302 C 0 s canFam3.chr1 20079634 433 - 122678785 ATGCCCAAT-TTCTTAAGGCACAGGCTGGTATC-AACACA-TGAAATCAACTGAGGTGCCTTGAAGATGGGAGAAAATG--ATGGCTCACACAAAATTTTGTGcagtccttctcaaagtgacatccccagatcagcagcatcagtgtcacctggaaacttgttaaaaataaacatcactggaccccaccgcataccttctgaatcaggaattattgggatccagag--------tctcagcCACC------------CCCCCCCAATGTTTTTAGAGCCACTGGCCAATGGAATCAGAGACTCAAAAATAGAGTCCAGGAATCTACAATCT------------------------------------------------TAT------------------------------------------AAGTGACTCAGATTATTCTTTTCCACATTAGGCATTATAAACCATGCCCCTAAGGCTGGATAGAAATGGGGATGTAGGGCAGCATAGTAATGTCTAA-TATTT---ATACCCACCTTATTTACAGGCA i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 33094 593 + 138250 I e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=316862.000000 s hg38.chr19_GL949753v2_alt 737238 337 + 796479 GAAATAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGGGGAAGGTGGTTCTGTTGGTAACCG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataacgaaacat-ctccgtgactgagtttcctcaccggaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT s panTro4.chr19 59937042 337 + 63644993 GAAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAACTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAGAG---AGAAGGGGTCCGTGTACCTCCTACGCTGTGCACCAGAATGGACCCTGCAGAACCTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACCG---ACTGGGGGTCACAGAGGATCCTGGgaaatcagaaaatgagataaatctgtgctctgt-cgctgtgggtcctgaacaaataaagaaacat-ctccgtgactgagtttcctgacctgaaaaatgagcctaaagtagcttacatcactggactgttgtggatgttaaT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878656 340 + 60714840 GGAGTAAAGGATTTTTAAAACAAAGCAAATCTGTGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAGAAGAAGGGGTCCGTGTACCTCATACGCTGTGCACCAGAATGGACCCTGCAGAACTTACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACTG---GCTGGGGGTCACAGAGGTTCCTGGgaaatcagaaaatgagataaatctgtgctctat-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacctgaaaaatgagcctaaaatagcttacatcactggactgttgtggatgttaaT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103363872 313 - 106955855 G---------------------------ATTTGGGAAAGAACCAAGTGAATTAAATCGAGAAGTCTAGGCAGAGAGGAGAAAGAAAAGAAGGGGTCCATGTACCTCATATGCTGTGCACCAGAATGGACCCTGCAGAACTAACCTGCTACCGAGGAAGGTGGTTCTGTTGGTAACAG---GCTGGGGGTCACGGAGGTTCCTGGgaaatcagaaaatgagataaatccgtgctctgt-cgctgtgggtcctgaacaaataatgaaacat-ctccgtgactgagtttcctcacccgaaaaatgagcctaaagtatcttacatcactggactgttgtggatgttaat i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 33687 329 + 138250 GAAGTGAAGGGTTTTTAAAACAAAGCAAGTTTCTTAAAGAAACAAGTGAGTTAAATTGACAAACCTAGGCAGAAAGGCAAG-----AGAAGGAGTCCATGTGCCTCACACCCCGCGCACCAGAATGGATCTTGCAGAACTTACCTTTGGCAGACGAAGGTGGTTCCGTTGGTAACTGGCTGCTGGGGGTCACAGAGATTCCTGGGAAATCAGAAAATGAGAAAAA----TGCTCTGG-TCATGGGAGTCATCAACAAATACTAAaacat-ctctgtaccctagtttcctcacccgaaaaatgagtctaaagtagcttacatcaatggattgctgtgGATG----- i calJac3.chr22_GL285922_random I 593 C 0 s canFam3.chr1 20080067 339 - 122678785 GAAATCAGTGattttttaaataaattaaatttGTGAAAGAGACAAGTGAATTAAATTGAGAAATCTGGATAAAAGGGGAAAAGAA-AAAAAGGGTCTATGGGTCT-ATATCCCAGACACCAGGATGAACCCTCCAGAATTTACCTGTCACAGAGGAAGGTGGTTCTCTGGATAACAA---ACCGGGGGTCACAGAAGTCCCTGGGAAATCAGAAAAAAAGAGAATTCTGTGCTCTCTGGGCTATGGGTCCTGGGCAAATAATAAAGCACATTCTGCGACCCACTTACCGCACCTAAAAGATGAATCCAAAGAAGCTCACATCG-TAGACTGTCATGGGTGTTAAT i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=5765.000000 s hg38.chr19_GL949753v2_alt 737575 11 + 796479 AAGCATTTGAg- s panTro4.chr19 59937379 11 + 63644993 AAGCATTTGAg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56878996 11 + 60714840 AAGCATTTGag- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364185 11 - 106955855 aagtATTTGAg- i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 34016 7 + 138250 -----TTTGAgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e macFas5.chr19 55805933 953 + 59248254 I e rheMac3.chr19 60664977 893 + 64156825 I a score=1898.000000 s hg38.chr19_GL949753v2_alt 737586 2 + 796479 ct s panTro4.chr19 59937390 2 + 63644993 ct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879007 2 + 60714840 ct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364196 2 - 106955855 ct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55806886 2 + 59248254 cc i macFas5.chr19 I 953 C 0 s calJac3.chr22_GL285922_random 34023 2 + 138250 cc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C e rheMac3.chr19 60664977 893 + 64156825 I a score=21990.000000 s hg38.chr19_GL949753v2_alt 737588 17 + 796479 gggtgcagtgcctcatg s panTro4.chr19 59937392 17 + 63644993 gggtgcagtgcctcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879009 17 + 60714840 gggcgcagtgcctcatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364198 17 - 106955855 gggcacagtgcctcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665870 17 + 64156825 gggtgcagtggctcaca i rheMac3.chr19 I 893 C 0 s macFas5.chr19 55806888 17 + 59248254 gggtgcagtggctcaca i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 34025 16 + 138250 aggcgcgg-ggctcaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e chlSab2.chr6 47612828 5309 + 50890351 I e papAnu2.chr19 47914578 0 + 51301725 C a score=115924.000000 s hg38.chr19_GL949753v2_alt 737605 56 + 796479 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag s panTro4.chr19 59937409 56 + 63644993 cctgtaatcccagcactttgggaggctgaggagggcagatcacttgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879026 56 + 60714840 cctgtaatcccagcactttgggaggccgaggagggcagatcacttgaggtcaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364215 54 - 106955855 cctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60665887 56 + 64156825 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806905 56 + 59248254 cctgtaatcccagcactctgggaggccgaggtgggcagatcgcctgaggtcaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618137 51 + 50890351 cctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagag i chlSab2.chr6 I 5309 C 0 s calJac3.chr22_GL285922_random 34041 54 + 138250 cctgtaatcccagcgttttgggaggcagagccaggcaaatc--ccgaggtcaggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e papAnu2.chr19 47914578 0 + 51301725 C a score=9267.000000 s hg38.chr19_GL949753v2_alt 737661 7 + 796479 ttcaagc s panTro4.chr19 59937465 7 + 63644993 ttcaagc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879082 7 + 60714840 ttcaagc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665943 7 + 64156825 ttcaagc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806961 7 + 59248254 ttcaaga i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47618188 7 + 50890351 ttcaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34095 7 + 138250 ttggaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C e papAnu2.chr19 47914578 0 + 51301725 C a score=996423.000000 s hg38.chr19_GL949753v2_alt 737668 500 + 796479 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggtgacgcagtaagactccatctg-----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactca--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tccccccaaaaaaa s panTro4.chr19 59937472 501 + 63644993 ccagcctggccagtatggtgaaaccccgtctccactaaaaatacaaaaattagccaggtgtggtggtgcgcacctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctaggaggcagaggttgcagtgatctgagatcacaccactgcactccagcctgggtgacgcagtaagactccatctga----------------------------------------------------------------aaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagatcacctgaggtcaagagttcaagaccagtctggccaacatggtgaaaccctgtctctacgaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgaactgagatcactccactgcactccagcctgggtgacaaagtgagac----tctcaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879089 498 + 60714840 ccagcctggccagtatggtgaaaccctgtctccact-aaaatataaaaattagccaggcgtggtggtgtgcacctgtaatcccagctgctcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgcagtgatctgagatcgcaccactgcactccagcctgggcgacgcagtaagactccatctc-----------------------------------------------------------------aaaaaaaaaGGCTTa---------------------gccgggcatggtggctcacacctgtaatcccagcactttgagaggccaaggcaggcagatcacctgaggtcaagagttcaagaccagcctggccaacatggtgaaaccctgtgtctac-aaaaatacaaaaattagctgggcatgatggcgggtgcctgtaatcccatctactcg--------------------------------------ggaggctgaggcaggagaatcgcttaaacccaggaggtggaggttgcagtgagctgagatcactccactgcactccagcctgggcgacaaagtgagac----tctcaacaaaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60665950 509 + 64156825 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcatgcacctgtagccccacctacttgggaggctgaggcaggagaaacgcttgaacctgggaggcagaggttgctgtgagccaagatcccaccactgcactccagcctgggcgatgcggtaaga--ctatctcaaaaaaaagtaaaag-----------------------------------------------aaaaaaaaagaaGGCTCA---------------------gccaggcgtggtggctcacacctgtaatcccagcccttt-----gcggaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgctgtgagccaagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55806968 511 + 59248254 ccagcctggccaaggtggtgaaa-cccgtctctatcaaaaatacaaaaattagccaggcattgtggcacgcacctgtagtcccacctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgccgtgagccaagatcacaccactgcactccagcctgggcgatgcagtaagactctatctcaaaaaaaaataaaag-----------------------------------------------aaaaaaaaagaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcaggcggatcacctgaggccaagagttcaagaccagcctggccaacatggtgaaaccccatatctac-aaaaatacaaacattagctgggcatgatggcaggtgcctgtaatcccagctactca--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagccgagatcacaccactgcactccagtctgggtgacagagcgagac----tctcaaaaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47914578 497 + 51301725 ccagcctggccaaggtggtgaaa-cccgtctctatcgaaaatacaaaaattagccaggcattgtggcatgcacctgtagtcccacctacttgggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatctcaccactgcactccagcctgggcgatgcagtaagactccatctca-------------------------------------------------------------aaaaaaaaagaaggctta---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgaccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactcg--------------------------------------ggaggctgaggcagcagaatcgcttaaacccgggaggtgcaggttgcagtgagctgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618195 551 + 50890351 ccagcctgtccaacatggtgaaaccccatatcta-caaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcacaccactgcactccagcctgggcgatgcaataagactccatctcaaaaaaaaaaaaaag---------------------------------------------aagaaaaaaaaaaaGGCTTA---------------------gccaggcgtggtggctcacacctgtaatcccagcacttt-----gccgaggcgggcagatcacctgaggccaagagttcaagaccagcctgtccaacatggtgaaaccccatatctac-aaaaatacaaaaattagctgagcatgatggcaggtgcctgtaatcccagctactcgggaggctgaggcgggggaatcgcttaaacccgggaggtggaggctgaggcagcagaatcgcttaaacccaggaggtgcaggttgcagtgagccgagatcacaccactacactccagtctgggtgacagagcaagac----tctcaaaaaaaaga i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 34102 574 + 138250 ccatcctggccaatatggtaaaatcccatctctactaaaaatacaaaaattagccaggcatggtggcaggcatctgtagtctcagctactctggaggctgaggcaggagaaacgcttgaacctgggagacggaggctgcagtgagcagagatcatgctattgcattccagccttggccacagagcaagactccgtctcaaaaaaaaaaaaaaaTCAAAGccatcgttaataataatgcattgtatatttcaaaattcctaaaacagtaaacattcttactacaaagaaattataagatggtgaggtgtagtgactcatgcctgtaatcccaacacttt------cagaggcaggaggctcacttgagcccaggagttcaagaccagcctgggcaacatgg-gaaactccatctctacaaaaaatacaaaaa-tagccgggcatgatggtgcccacctgtagtcccagctactag--------------------------------------ggaggctgtggtgggaggatcac-agaacctgggaggcagaggctgcactgaaccaagatcaaaccactgcgctccatcctgggtgac----cgagaccctgtcccaaaaaaa--- i calJac3.chr22_GL285922_random C 0 I 448 e canFam3.chr1 20080406 0 - 122678785 C e nomLeu3.chr10 103364269 0 - 106955855 C a score=14435.000000 s hg38.chr19_GL949753v2_alt 738168 31 + 796479 aaaaaaaaaaaaaa---aGCAGCAGCATTTGTAA s panTro4.chr19 59937973 34 + 63644993 aaaaaaaaaaaaaaaGCAGCAGCAGCATTTGTAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879587 22 + 60714840 gagga------------agaaGCAGCATTTGCAA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666459 18 + 64156825 aaaaaaa----------------aGCATTTGTAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807479 21 + 59248254 aaaaaaa-------------GGCAGCATTTGTAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915075 18 + 51301725 caaaggc----------------agcATTTGTAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618746 26 + 50890351 aaaaaaaaa--------aaaGGCAGCATTTGTAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080406 0 - 122678785 C e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=262604.000000 s hg38.chr19_GL949753v2_alt 738199 137 + 796479 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCACCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT s panTro4.chr19 59938007 137 + 63644993 AGCACACCTGGCACATTCTGGGCTA-TTAACAAGGAAATGC-ATGCAGCTCCCGT-CCGCCTTTTTCAACCTCAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879609 138 + 60714840 AGTACACCTGGCACATTCTGGGATA-TTAACAAGGAAATGC-ATGCAGTTCCCATCCCTCCTTTTTCGACCTCAGTTCTGT---TTCTTCTGGATTTCTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGA-TTTTT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666477 143 + 64156825 AGCATACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807500 143 + 59248254 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGCAACTCCTGTCCGTCCTTTTTGAACCTCAGTTCTATTTCTTCTTCTGGATTCTTGTGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915093 143 + 51301725 AGCACACCTGGCACATTCTGGGATATTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTcagttctgtttcttcttctggaTTCCTGGGTCCTACCCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618772 140 + 50890351 AGCACACCTGGCACATTCTGGGATACTTAACAAGGAAATGC-ATGTAACTCCTGTCCCTCCTTTTTGAACCTGAGTTCTAT---TTCTTCTGGATTCCTGTGTCCTACTCCTCACTGTGACCCTGGGGGCAAAACAGACTTTTT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20080406 140 - 122678785 AGCACACCTAGCACATTCTGGACTAGTTTATATCGACAGGCTTTATAGCTGCC-TCCCTGCTTTTCGAACCTCAGCTCTGC--CCTTTTCTAGATCTCTGTGACCTGCACCTTACATTGCCCCTAGTAGCAAAACTGGCTCTT- i canFam3.chr1 C 0 I 5509 e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=58626.000000 s hg38.chr19_GL949753v2_alt 738336 34 + 796479 CTACC-AAAAACTAAATGATGTATTTTGTTTGATT s panTro4.chr19 59938144 34 + 63644993 CTACC-AAAAACTAAATTATGTATTTTGTTTGATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879747 34 + 60714840 CTACC-AGACACTAAATGATGTATTTTGTTTGATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666620 35 + 64156825 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55807643 35 + 59248254 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i macFas5.chr19 C 0 I 512 s papAnu2.chr19 47915236 35 + 51301725 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618912 35 + 50890351 CTACCAAAAAACTAAATGATGTATTTTGTTTGATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=17577.000000 s hg38.chr19_GL949753v2_alt 738370 9 + 796479 TAATATGAc s panTro4.chr19 59938178 9 + 63644993 TAATATGAc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879781 9 + 60714840 TAATATGAC i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60666655 9 + 64156825 TAATATGAC i rheMac3.chr19 C 0 I 336 s macFas5.chr19 55808190 9 + 59248254 TAATATGAc i macFas5.chr19 I 512 C 0 s papAnu2.chr19 47915271 9 + 51301725 TAATATGAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618947 9 + 50890351 TAATATGAc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=-3977.000000 s hg38.chr19_GL949753v2_alt 738379 1 + 796479 -a s panTro4.chr19 59938187 1 + 63644993 -a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879790 1 + 60714840 -C i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55808199 1 + 59248254 g- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915280 1 + 51301725 G- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47618956 1 + 50890351 g- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C e rheMac3.chr19 60666664 336 + 64156825 I a score=388638.000000 s hg38.chr19_GL949753v2_alt 738380 233 + 796479 ttgttaaatgtactgatcagtggcgttgggtatgttcacattgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagatacctcctttgactagaatcat-acagtagttgtccttttg----tgactg s panTro4.chr19 59938188 237 + 63644993 ttgttaaatgtactgatcagtggcgttgggtatgttcacactgtggtacaatatgttgacctctagaacttatttttcttgcaaaactgaaattctgtgcccattaaacactaattccttctctctcctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccttctttgagtagaatcat-acagtagttgtccttttgtgactgactg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56879791 233 + 60714840 TGGttaagtgtgctcatccgtggcgttgggtatgttcacactgtggtacaacgtgttgacctctaaaacgtatttttcttgcaaaactgaaactctgtgcctattaaacactaattccttctctcccctctttctggcccttaacaaccaccattgtactttgtgtttctacagtgttgacattagataccgcctttgagtagaatcat-acactagttgtccttttg----tgactg i ponAbe2.chr19 C 0 I 4084 s rheMac3.chr19 60667000 234 + 64156825 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagttatttttcttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i rheMac3.chr19 I 336 I 9 s macFas5.chr19 55808200 234 + 59248254 ttgttaagtgtactgaccagtggcattgggtatgttcacattgtggtacaatatgttgacctctagaagctatttttcctgcaaaagtgaaactctatgcccattaaacactaattcctgctctcccctctttctgtcccttaacaaccaccgttgtactttgtgtttctataattttgacattagatacctcctttgagtagaatcataatagtagttgtcctttta----tgactg i macFas5.chr19 C 0 I 9 s papAnu2.chr19 47915281 233 + 51301725 TTGTTAAGTGTACTGACCAGTGGCATTGGGTATGTTCACATTGTGGTACAATATGTTGACCTCTAGAAGCTATttttcttgcaaaactgaaactctatgcccATTAAACACTCATTCCTGCTCTCCCCTCTTTCTGGCCCTTAACAACCACCGTTGTACTTTGTGTTTCTACAATTTTGACATTAGATACCTCCTTTGAGTAGAATCAT-ATAGTAGTTGTCCTTTTA----tgactg i papAnu2.chr19 C 0 I 9 s chlSab2.chr6 47618957 214 + 50890351 ttgttaagtgcactgaccagtggcattgggtatgttcacattgtggtacaatat-----------gaagttattttttttgcaaaactgaaactctatgcccattaaacactaattcctgctctcccctctttctggcccttaacaaca--------attttgtgtttctacaattttgacattagatacctcctttgagtagaatcat-acagtagttgtccttttg----tgactg i chlSab2.chr6 C 0 I 9 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=273542.000000 s hg38.chr19_GL949753v2_alt 738613 155 + 796479 acttagcataatgtcctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTTTTTTGAAAGAAACCCCCTTTAAGAATGGTAGTC s panTro4.chr19 59938425 155 + 63644993 acttagcataatgtcctcaaggtatatccatgttgtagtctgtgtcagaatttccttcttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884108 152 + 60714840 acttagcataatgtcctcaagataaatccatgttgtagtatgtgtcagaatttc---cttttttaaggctgcataatattccattgcatgta---------------------------------tataaccacat------------------------------------tatgAGGTATGCTGCTCTCTTTTGAGAGAAACCCCCTTTAAGAATGGTAGCC i ponAbe2.chr19 I 4084 C 0 s rheMac3.chr19 60667243 224 + 64156825 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattGTTATACACATGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i rheMac3.chr19 I 9 C 0 s macFas5.chr19 55808443 224 + 59248254 acttagcataatgttctcaaggtatatccatgttgtagtatatgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTGTATAACCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i macFas5.chr19 I 9 C 0 s papAnu2.chr19 47915523 191 + 51301725 acttagcataatgttctcaaggtatatccatgttgtagtatgtgtcagaatttccttcttttttaaggctgcgtaatattccattgcatgta---------------------------------tataaCCACATTGTTATATACATGTGGTATGTGTATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACCCCCTTTAAGAATGGTAGCC i papAnu2.chr19 I 9 C 0 s chlSab2.chr6 47619180 205 + 50890351 acttagcataatgtcctcaaggtaaatccatgttgtagtaggtgtcagaatttccttcttttttaaggttgcgtaatattccattgcatgtatataaccacattgttatatacatGTGGTATGTATATAACCAC-------------------ATGTATATAACCACATATATATGAGGTATGCTGCTCTCTTTTGAAAGAAACTCCCTTTAAGAATGGTAGCC i chlSab2.chr6 I 9 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e calJac3.chr22_GL285922_random 34676 448 + 138250 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=168449.000000 s hg38.chr19_GL949753v2_alt 738768 73 + 796479 AAGTCCgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtc---ag s panTro4.chr19 59938580 76 + 63644993 AAggccgacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatca--tgaggtcaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884260 76 + 60714840 AAggccggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatca--tgaggtcaggag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60667467 76 + 64156825 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55808667 76 + 59248254 AAGGCTggcacggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47915714 76 + 51301725 AAGgctggcacggtggttcacgcctgtaatcccagcactttgggaggctgagacaggcagatca--tgaggtcaggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619385 76 + 50890351 AAGTCTggcatggtggttcacgcctgtaatcccagcactttgggaggctgaggcaggcagatca--tgaggtcagaag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35124 75 + 138250 Aggccaggtgcggtggctcacgcctgcactcccagcactttgggaggttgaggcaggcagatcacctgaggtcag--- i calJac3.chr22_GL285922_random I 448 I 3 e canFam3.chr1 20080546 5509 - 122678785 I e nomLeu3.chr10 103364269 0 - 106955855 C a score=633731.000000 s hg38.chr19_GL949753v2_alt 738841 215 + 796479 ttcaagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcagcagaatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagtgagacttcgtc----aaaaaaaaaaaa s panTro4.chr19 59938656 217 + 63644993 ttcaagaccagcctgaccaacatagtgaaaccctgtctctactaaaaatacaaaaattggccgggcatggtggcaggcacctgtaattccagctactcgagaggctgaggcaggaggatcgcttgaacccggaaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagacttagtc--aaaaaaaaaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884336 213 + 60714840 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaagttagccgggcatggtggcaggcacctgtaatcccagctactcgagaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatagtgccactgcactccagcctgggtgac--agtgagacctcgtc----aaaaaaaaaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364269 218 - 106955855 ttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaaatacaaaa-ttagccgggcatggtggcaggcacctgtcatcccagctactcgagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttacagtgagctgagatcgcaccactgcactccagcctgggtgacagagtgagacctcgtcaaaaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667543 215 + 64156825 ttcgagaccagcatgacccacagagtgaaaccccgtctctactaaaaatacaaaaatgagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggagccagaagttgcagtgagctgagatcgccccatagcgctccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55808743 215 + 59248254 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccatagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47915790 215 + 51301725 ttcgagaccagcctgacccacagagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgccccacagcactccagcctgggtgacagagtgagacttcatc----aaaaaaaaaaaa i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47619461 213 + 50890351 ttcgagatcagcctgacccac--ggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacctgggagacggaggttgcagtgagctgagatcgccccactgcactccagcctgggtgacagagtaagacttcatc----aaaaaagaaaag i chlSab2.chr6 C 0 I 2 s calJac3.chr22_GL285922_random 35202 215 + 138250 ttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgagtgtggtggcgcacacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccactgcactccagcctagatgatagagtgagactccatc----aaaaaaaggaaa i calJac3.chr22_GL285922_random I 3 C 0 e canFam3.chr1 20080546 5509 - 122678785 I a score=52134.000000 s hg38.chr19_GL949753v2_alt 739056 24 + 796479 aagaaaCCTCCATTCTCCCAGCTG s panTro4.chr19 59938873 24 + 63644993 aagaaaCCTCCATTCTCCCAGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884549 24 + 60714840 aagaaaCCTCCGTTCTCCCAGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364487 24 - 106955855 aagaaaCCTCTATTCTCCCAGCTG i nomLeu3.chr10 C 0 I 54 s macFas5.chr19 55808969 24 + 59248254 aagaaaCCTCCATCCTCCCAGATG i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47916016 24 + 51301725 aagaaacctccaTCCTCCCAGCTG i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47619676 24 + 50890351 aagaaaCCTCCATCCTCCCAGATG i chlSab2.chr6 I 2 C 0 s calJac3.chr22_GL285922_random 35417 19 + 138250 -----aCCTACATCCTCCCAGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e rheMac3.chr19 60667758 35 + 64156825 I a score=5865.000000 s hg38.chr19_GL949753v2_alt 739080 4 + 796479 CCTG s panTro4.chr19 59938897 4 + 63644993 CCTG i panTro4.chr19 C 0 I 54 s nomLeu3.chr10 103364565 4 - 106955855 CCTG i nomLeu3.chr10 I 54 C 0 s macFas5.chr19 55808993 4 + 59248254 CCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35436 4 + 138250 CCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=43445.000000 s hg38.chr19_GL949753v2_alt 739084 38 + 796479 TAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACC s panTro4.chr19 59938955 38 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACT i panTro4.chr19 I 54 C 0 s nomLeu3.chr10 103364569 38 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55808997 38 + 59248254 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 C 0 T 42 s papAnu2.chr19 47916044 38 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35440 38 + 138250 AAGCCTGGGGCTTCCTGCCCTCTCGTTTCCTTTGCACC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e rheMac3.chr19 60667758 35 + 64156825 I a score=7133.000000 s hg38.chr19_GL949753v2_alt 739122 11 + 796479 TCTGGCCCCGC s panTro4.chr19 59938993 11 + 63644993 TATGGCCCCTC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364607 11 - 106955855 TATGGCCCCTC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916082 11 + 51301725 TATGGCCCCTC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 35478 11 + 138250 CAGGGCCCCAC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 739133 1 + 796479 C s panTro4.chr19 59939004 1 + 63644993 C i panTro4.chr19 C 0 T 108 s nomLeu3.chr10 103364618 1 - 106955855 C i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916093 1 + 51301725 C i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1746.000000 s hg38.chr19_GL949753v2_alt 739134 3 + 796479 CCT s panTro4.chr19 59938897 3 + 63644993 CCT i panTro4.chr19 T 108 C 0 s nomLeu3.chr10 103364511 3 - 106955855 CCT i nomLeu3.chr10 T 108 C 0 s papAnu2.chr19 47916094 3 + 51301725 CCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27381.000000 s hg38.chr19_GL949753v2_alt 739137 51 + 796479 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938900 51 + 63644993 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364514 51 - 106955855 GCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 51 + 51301725 GCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949753v2_alt 739188 54 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 T 54 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=29127.000000 s hg38.chr19_GL949753v2_alt 739242 54 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=28734.000000 s hg38.chr19_GL949753v2_alt 739296 54 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938951 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCTCC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26564.000000 s hg38.chr19_GL949753v2_alt 739350 51 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCC s panTro4.chr19 59939005 51 + 63644993 CCTGCAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCACTTACGGCCCC i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364565 51 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTACTTATGGCCCC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916040 51 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCC i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2484.000000 s hg38.chr19_GL949753v2_alt 739401 6 + 796479 GCCCCT s panTro4.chr19 59939002 6 + 63644993 TCCCCT i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364616 6 - 106955855 TCCCTT i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916091 6 + 51301725 TCCCCT i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 739407 1 + 796479 G s panTro4.chr19 59939008 1 + 63644993 G i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364622 1 - 106955855 G i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916043 1 + 51301725 G i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=19392.000000 s hg38.chr19_GL949753v2_alt 739408 37 + 796479 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCAC s panTro4.chr19 59939009 37 + 63644993 CAGCCCAGGGCTTCCTGCTCTCCCACTTCCTTCCCAC i panTro4.chr19 C 0 T 149 s nomLeu3.chr10 103364569 37 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCTAC i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916044 37 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCAC i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2260.000000 s hg38.chr19_GL949753v2_alt 739445 13 + 796479 CTCTGGCGCCGCC s nomLeu3.chr10 103364606 13 - 106955855 TTATGGCCCCTCC i nomLeu3.chr10 C 0 T 108 s papAnu2.chr19 47916081 13 + 51301725 CTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I e panTro4.chr19 59939046 149 + 63644993 T a score=28425.000000 s hg38.chr19_GL949753v2_alt 739458 54 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCTTTCCCACCTATGGCCGCGCC s panTro4.chr19 59938897 54 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 149 C 0 s nomLeu3.chr10 103364511 54 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 T 108 T 54 s papAnu2.chr19 47916040 54 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 T 54 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=1953.000000 s hg38.chr19_GL949753v2_alt 739512 4 + 796479 CCTA s panTro4.chr19 59938951 4 + 63644993 CCTG i panTro4.chr19 C 0 T 54 s nomLeu3.chr10 103364511 4 - 106955855 CCTG i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 4 + 51301725 CCTG i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=26781.000000 s hg38.chr19_GL949753v2_alt 739516 50 + 796479 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCGCC s panTro4.chr19 59938901 50 + 63644993 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i panTro4.chr19 T 54 C 0 s nomLeu3.chr10 103364515 50 - 106955855 CAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCTCC i nomLeu3.chr10 C 0 T 54 s papAnu2.chr19 47916044 50 + 51301725 CAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCTCC i papAnu2.chr19 C 0 T 54 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=27534.000000 s hg38.chr19_GL949753v2_alt 739566 52 + 796479 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTACGGCCCCG s panTro4.chr19 59938951 52 + 63644993 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACTTATGGCCCCT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364511 52 - 106955855 CCTGCAGCCCAGGGCTTCCTGCCCTCCCACTTCCTTCCCACCTATGGCCCCT i nomLeu3.chr10 T 54 C 0 s papAnu2.chr19 47916040 52 + 51301725 CCTGCAACCCAGGGCTTCCTGCCCTCCCACGTCCTCCCCACCTATGGCCCCT i papAnu2.chr19 T 54 C 0 e canFam3.chr1 20080546 5509 - 122678785 I e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=2000.000000 s hg38.chr19_GL949753v2_alt 739618 2 + 796479 CC s panTro4.chr19 59939003 2 + 63644993 CC i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103364563 2 - 106955855 CC i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47916092 2 + 51301725 CC i papAnu2.chr19 C 0 T 54 s canFam3.chr1 20086055 2 - 122678785 CC i canFam3.chr1 I 5509 C 0 e ponAbe2.chr19 56884573 0 + 60714840 C e calJac3.chr22_GL285922_random 35489 0 + 138250 C e chlSab2.chr6 47619700 0 + 50890351 C e macFas5.chr19 55809035 42 + 59248254 T e rheMac3.chr19 60667758 35 + 64156825 I a score=113569.000000 s hg38.chr19_GL949753v2_alt 739620 42 + 796479 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT s panTro4.chr19 59939005 42 + 63644993 CCTGCAGCCCAGGGCT--TCCTGCTCTCCCACTTCCTTCCCACT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884573 42 + 60714840 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCCACT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364565 42 - 106955855 CCTGCAGCCCAGGGCT--TCCTGCCCTCCCACTTCCTTCCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667793 42 + 64156825 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCTACC i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55808993 42 + 59248254 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i macFas5.chr19 T 42 C 0 s papAnu2.chr19 47916040 42 + 51301725 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACGTCCTCCCCACC i papAnu2.chr19 T 54 C 0 s chlSab2.chr6 47619700 42 + 50890351 CCTGCAACCCAGGGCT--TCCTGCCCTCCCACTTCCTCCCCACC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086057 44 - 122678785 TCCAAAGCCTCAGGCTTCTCCTCGCCTCCCACCCCCTTCACACC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=2548.000000 s hg38.chr19_GL949753v2_alt 739662 1 + 796479 T s panTro4.chr19 59939047 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884615 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364607 1 - 106955855 T i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667835 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47916082 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619742 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086101 1 - 122678785 T i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C e macFas5.chr19 55809035 0 + 59248254 C a score=25753.000000 s hg38.chr19_GL949753v2_alt 739663 9 + 796479 -ATGGCCCCT s panTro4.chr19 59939048 9 + 63644993 -ACGGCCCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884616 9 + 60714840 -ACGGCCCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364608 9 - 106955855 -ATGGCCCCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667836 9 + 64156825 -ATGGCCCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809035 9 + 59248254 -ATGGCCCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916083 9 + 51301725 -ATGGCCCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47619743 9 + 50890351 -ATGGCCCCC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086102 10 - 122678785 GTTGGCCCCT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 35489 0 + 138250 C a score=15792.000000 s hg38.chr19_GL949753v2_alt 739672 5 + 796479 CCCTT s panTro4.chr19 59939057 5 + 63644993 CCCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56884625 5 + 60714840 CCCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364617 5 - 106955855 CCCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667845 5 + 64156825 CCCCT i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55809044 5 + 59248254 CCCCT i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47916092 5 + 51301725 CCCCT i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47619752 5 + 50890351 CACTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35489 5 + 138250 CCCTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20086112 5 - 122678785 CCCCT i canFam3.chr1 C 0 C 0 a score=2106978.000000 s hg38.chr19_GL949753v2_alt 739677 651 + 796479 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGAAAACTAGCCCTGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGACGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAG-AAAGTCTGATGTTGAAGGCAGGAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTCGAGTC-ACCCAGTGGTTGAGGAAG-GAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttctgccttcaggggcctggtggccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgactg s panTro4.chr19 59939062 629 + 63644993 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACTACCCCTACCTGTGACCACAAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCTGGGCTGGGCTGAGAGCGAGGGTTTGGCAAAAACTCCTGGGAGAAAAAT-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGCTT---------------------------------------AGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTCGAGTC-ACCCAGTGGTTGAGGAAG-GAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttctgcctgtaggggcctggtggccctggagacaaatct--ccctccgtatctgagcctcgctgccttgttctgttaaaatggggatgactg i panTro4.chr19 C 0 I 1 s ponAbe2.chr19 56884630 653 + 60714840 GGAATGGCCATCAGGACCTATAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCACGAGCTCCAGGGGGTCACTGGGGGCCGACCACAGGTATGGGTCCCCACTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGAGTCTGACACTGTAGAGTTACGTCCCCTCCTGAGGACACCGCTGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGGAAAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGGGCTGGGGAGCTTTTT-----------------GGCTGTATCCCTCCCAGAGAGCGCACTCCCCCACCCA--AGCT--CACAGAGAGGTGAGGTTGAGGAAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgaaaatcctagttctgcctttaagggcctggt-gccctggagacaaatct--ccctctgtatctgagcctcactgccttgttctgttaaaatggggatgaCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103364622 651 - 106955855 GGAATGGCCATCAGGACCTATAAAGTCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCAGGAGCTCCAGGGGGTCGCTGGGGGCCGACCACAGGTATGGGTTCCCGCTGGAGAAGCTGTAGCATCGGTAGGTTCCGCTGTGGGCGGCGGTCACTGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGAATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCTTCCTGAGTCTGACACTGTAGGGTTACGTCCCCTCCTGAGGACACCGCCGGGCCTGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGGCTGATGTTAATGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTCCCCACACCTGCCTAAGAGCTGGGGAGGTTTTT-----------------GGCCGTATCCCTCCCAGAGAGTGCACTCCCCCACCCA--AGCT--CACAGACAGGTCGGGTC-ACCGAGTGGTTGAGGAAGCGAGGCTGT--GCTCACGTCCTAGTGcttgggtgcaaatcctagttgtgcctttaagggcctggtggccctggagacaaatct--ccctctgtgtctgagcctcactgccttg-tctgttaaaatgggggtgactg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60667851 664 + 64156825 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAAAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCTGGCTGTATCCCTCCCAGGGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCTCACACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55809050 645 + 59248254 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAACAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCCGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TCAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACAGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAG-C-ACCAagtggttgaggaagcgaggctgtgtgcccacatcctagtgcctgggtgcgaatcctggttctgcctttaa-------gtggccccggagacaaatct---cctctgtatctgagcctcactgccttgttctgctaaaatggggatgatcg i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47916098 647 + 51301725 GGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGAAAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGACGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCATCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCCTCCCAGACCGCACACTCCCCCACCCA--AGCT--CACAGAGAGGTCAAGTC-ACCGAGTGGTTGAGGAAGCGGGGCTGTGCGCTCACATCCTAGTGCCTGGGtgcaaatcctggttctgccttTAA-------GTGGCCCCGGAGACAAATCT--CCCTCTGTGTCTGAGCCTCAGTGCCTTGTTCTGCTAAAACGGGGATGATCG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47619757 646 + 50890351 CGAATGGCCCTCAGGACCTACAAAGGCTGAGGAAGACAGGTTTGGTCTGCACCACCCCTACCTGTGACCATGAGCTCCAGGGGGTCGCTGGGAGCCGACCACAGGTATGGGTCCCTGCTGGAGAAGCTGTAGCACCGGTAGGTTCCGCTGTGGGCAGCGGTCACCGTGATGATGGGGAAACTAGCCCGGTACCATCTCTCGGGATTCTTGTAGGGCGCAGGGTCCCCTTCCTTGTACAGAGCAAATTGGTCAAAGCCATACCGGGTCTGACACTGTAGGGTCACGTCCCCTCCTGAGGACACCGCCGGGCCGGGCTGGGCTGAGAGCGAGGGCTTGGCAAAAACTCCTGGGAGAAAAGG-AAAGTCTGATGTTAAAGGCAGCAGCCAGCGTCTCAGC--TGAGACTGGGGAGGTGCCCACACCTGCCTGAGAGCTGGGGAGCTTTCT-----------------GGCTGTATCCGTCCCAGACAGCGCACTCCCCCAGCCA--AGCT--CACAGAGAGGTCAAG-C-ACCGAGCGGTTGAGGAAGCGAGGCTGTGTGCCCACATTCTAGTGcctgggtgcgaatcccggttctgcctttaa-------gtggccccggagacaaatct--ccctctgtgtctgagcctcagtgccttgttctgctaaaatggggatgatcg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 35494 637 + 138250 GGAATGGCTATCAGGACCTAAAAAGGTTGAGGAAGAAAGGTTTGGTCTGCAACACCCCTACCTGTGACCACGAGCTCCAGGGGATCACTGGGGGCCGACCACAGGTATGGGGCCCTTCTGGAGAAGCTGTAGCAGCGGTAGGTCCCGCTGTGGGCAGCGGTTACCGTGGTGATGGGGAAGCTAGCCCGGTACCATCTCTCGGGGTTCCTGTAGGGTCCAGGGTCGCCGTCCTTGTACAGAGCAAATTGGTCAAAGCCATATTTGGTCTGACACCGTAGGGTCACATCCCCTCCTGGGGACACTGCCGGGCCAGGCTGGGCTGAGAGCGAGGGCTTAGGAAAAACTCCTGGGAGAAAAGG--AAGTCTGGTGTTAAAGGCG------AGTATCTCAGC--TGGGGCT-GGGAGGTCCCCCCGCCTGCCCAA--GCTGGGGAGCTTTAT-----------------GGCTGTATCCCTCCCAG--AGTGCACTCCCTTGCCCC--AGCT--CAGAGAGAGGTCAAGTC-A-TGAATGGTTTACAGAGTGAGGCTGT--GCCCACATCCTAGTGctt-ggtgcaaaccctggttctgcccttaggggcta-gtggccctggagaccaatct--ccctctgtatctgagcctcactaccttgttttgttaaagtggggatgattg i calJac3.chr22_GL285922_random C 0 I 661 s canFam3.chr1 20086117 615 - 122678785 GGAACTTCCACCAGAGTATGCAAGAGCTGAAGAAGAAAGGCTTGGACTGCATCTCCCTCACCTGTTACCACAAGCTCCAGGGGGTCGCTGGGGGCTGACCACAGGTACGGGAACTTGCTGGAAAAGCTATAGCATCGGTAGATCCCACTGTGGGCAACAGTCACTGCGGTGATGGGGAAATTGGCCCAGTACTGTTCTGCAGATTGCTTGTGGGGCTCAGTGTCCCCCTCCTTGTACAGAGCGAATTGGTCAAAACTGTATTTACTCTGACATCGTAGAGTGACATCCCCTCCTTGGGACACAGCCAGGCTGGGCTGGGCTGAGAGTGAGGGCTTAGCATAAACTCCTGGTTGAAAAGA-GAGCTCTGGTGTTAAAGACCATGGAAAGTGTGTTGACCATGGGGGTAGGAAGATTCCCCCCACCTCCTAAGAGCTAGGAAACTCTTC-----------------AGGTATATCCCTTCTAGAGAACCCACTCACCCTGCTACCAACT--CACAAAAGGGT-----T-A----------AAGGGAGCATGACCAA--GATCATATCACAGTTCCCAGGCTCAAAT----------CGCTTAGGGGCTGTGTGATCCTGGAGATAAACCTACCCCTCTATCTGTGTGCCTCAGTGTTCTTTACTG------------------ i canFam3.chr1 C 0 C 0 a score=126354.000000 s hg38.chr19_GL949753v2_alt 740328 56 + 796479 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcgctg------------gagt s panTro4.chr19 59939692 52 + 63644993 aatgagacagtacacagtaa----tttgcagag-tgcccgttgcctag-caggcgctg---------------- i panTro4.chr19 I 1 C 0 s ponAbe2.chr19 56885283 69 + 60714840 AATGAGACAGTACACAGTAA----TTTGCAGAG-TGCCTGTTGCCTAGCCAAGCCCTGGAAATAAGACGGGAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365273 56 - 106955855 aatgagacagtacacagtaa----tttgcagag-tgcctgttgcctag-caagcactg------------gagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668515 72 + 64156825 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809695 72 + 59248254 aacgagacagtacacagtaagcatttagcagag-tgcctgttgcctag-caagcgcttgaaatgagatgggagT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916745 72 + 51301725 AACGAGACAGTACACAGTAAGCATTTAGCAGAG-TGCCTGTTGCCTAG-CAAGCGCTTGAAATGAGATGGGAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620403 72 + 50890351 aacgagacagtacaccgtaagcatttagcagag-tgcctgttgcctag-cgagcgcttgaaatgagatgggagT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20086732 59 - 122678785 AATGAAACAA--------------CTAACAGAGTTGCCTAATGCATAG-GGAGCTCCCAAACTATGATGGTagt i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36131 661 + 138250 I a score=155781.000000 s hg38.chr19_GL949753v2_alt 740384 55 + 796479 aagtaaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT s panTro4.chr19 59939744 55 + 63644993 aagtaaatagCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885352 55 + 60714840 AAGTAAATAGCTTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365329 55 - 106955855 aaataaatagctTAAGCTTATACTGTG--CTGTAAGCTTGTATTGCCACATACAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668587 55 + 64156825 ACGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809767 55 + 59248254 ACGTAAACAGCTGAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916817 55 + 51301725 AAGTAAACAGCTTAAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620475 55 + 50890351 AAGTAAACAGCTTGAGCTTATACCATG--CCGTAAGCTTGCATTGCCACATACAATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36792 55 + 138250 aaaaaaaGAGCTTAAGCTTAGGCTGTG--CCGGAAGCTTACACTGCAGCATGCGATC i calJac3.chr22_GL285922_random I 661 C 0 s canFam3.chr1 20086791 57 - 122678785 aacaaaatagcttaatattttaatgcaatttttaaaccaaaattaatgcaaataatt i canFam3.chr1 C 0 I 689 a score=247665.000000 s hg38.chr19_GL949753v2_alt 740439 92 + 796479 GTTACGTTGTAAATGTGGCTGACAGTGCTAGCTTCCGGGTGCCttccaaacttatgatgtatatcagttcagtgaatcct--cagagacctatg s panTro4.chr19 59939799 92 + 63644993 GTTACATTGTAAATGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatatatatcagttcggtgaatcct--cagagacctatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885407 92 + 60714840 GTTACATTGTAAACGTGGCTGACAGTGCCAGCTTCCGGGTGCCttccaaactcatgatgtatatcagttcagtgaatcct--cagagacctatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365384 92 - 106955855 GTTACGTTGTTAACGTGGCTGACAGTGCCAGCTTCCTGGTGCCttccaaactcatgatgtgtatcagttcagtgaaccct--cagagacctatt i nomLeu3.chr10 C 0 I 323 s rheMac3.chr19 60668642 91 + 64156825 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809822 91 + 59248254 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCttccgaactcatgacgcacatcagttcagtgaatcct--cagagacctgtg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916872 91 + 51301725 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCTGGGTGCCTTCCAAACTCATGACGTACATCAGTTCAGTGAATCCT--CAGAGACCTGTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620530 91 + 50890351 GTTACGTTGGAAACGTGGCTGACGGTGCCAGC-TCCGGGTGCCttccgaactcatgccgtacatcagttcagtgaatcct--cagagacctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36847 94 + 138250 ATTCCATCGCAAACGTGGGTGAAAGTGCCAGCTTccaggtgccttccaaactcaggacatgtatcaattcagtgaatcctcacagatacctaca i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I a score=121802.000000 s hg38.chr19_GL949753v2_alt 740531 40 + 796479 gagtcctcactcttaatgtccctattttataaatgaaact s panTro4.chr19 59939891 40 + 63644993 gagtcctcactgttaatgtccctattttataaatgaaact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885499 40 + 60714840 gagtcttcactcttaatgtccctattttataaatgaaact i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365799 40 - 106955855 gagtcctcactcttaaagtccctattttataaatgaaact i nomLeu3.chr10 I 323 C 0 s rheMac3.chr19 60668733 40 + 64156825 gagtcctcactcttaatgtccctattttataaatgaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55809913 40 + 59248254 gagtcctcactcttaacgtccctattttataaatgaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47916963 40 + 51301725 GAATCCTCACTCTTAacatccctattttataaatgaaact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620621 40 + 50890351 gagtcctcactcttaacgtccctattttataaatgaaact i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 36941 40 + 138250 aggtcatcactattaatgtccctattttataaatgaAACT i calJac3.chr22_GL285922_random C 0 I 3745 e canFam3.chr1 20086848 689 - 122678785 I a score=530837.000000 s hg38.chr19_GL949753v2_alt 740571 247 + 796479 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacagctgaaatttgctaagagggtagattataagtattctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tagtaactgtctcacagtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttgtttttcaattatacctcaacaaagctgga s panTro4.chr19 59939931 243 + 63644993 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtgcagctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtcaggtgatgtatgttaattagcttgctag-tggtaactgtctcacagtggattcgtatatcaaaacatcaacttctacaccttggatatattccatt----tttttcaattatacctcaacaaagctgga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885539 248 + 60714840 aaggcacatggcattaaataatttgtccaactctgggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtatgctaattagcttgctagttggtggttgtctcacagtggattcgtatatcaaaacatcaacttgtatgccttggatatattccatttttgtttttcaattatacctcaacaaaactgga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103365839 247 - 106955855 aaggcacatggcattaaataatttgtccaactctaggtaacaatactgcagtgtacacctgaaatttgctaagagggtagattataagtgttctcacacacaa---aaaagttaactgtgtgaggtgatgtgtgttaattagcttgctag-tggtaactgtctcaccgtggattcgtatatcaaaacatcaacttgtacaccttggatatattccatttttatttttcaattatatctcaacaaagctgga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60668773 240 + 64156825 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcgaggtgatgtatgttaattagcttgctcg-tggtaactgtctcacagtggatacgtacatcaaaaca------tgtatgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i rheMac3.chr19 C 0 I 325 s macFas5.chr19 55809953 240 + 59248254 aaggcacatggcgtt----aatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagattataagtgttctcacactcaaaagaaaagttaactgtgcaaggtgatgtatgttaattagcttgctcg-tggtaactatctcacagtgggtacgtacatcaaaaca------tgtacgccttggatatgttccatttttgtttttcaattataactcaacaaacctgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917003 244 + 51301725 aAGGCATATGGCGTTAAAGAATTTGTCCAACCCCAGGTAACAAGACGGCAGTGCGTACTTGgaatttgctaagagggtagattATAAGTGTTCTCACACGCAAAAGAAAAGTTAACTGTGCGAGGTGatgtatgttaattagcttgctCG-TGGTAACTATCTCACAGTGGATACGTACATCAAAACA------TGTACGCCTTGGATatgttccatttttgtttttcaattataACTCAACAAacctgga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620661 244 + 50890351 aaggcacatggcgttaaagaatttgtccaaCCCtaggtaacaagacagcagtgcgtacttgaaatttgctaagagggtagatcataagtgttctcacacgcaaaagaaaagttaactgtgcgaggtaatgtatgttaattagcttgctcg-tggtaactatctcacagtggatacgtacatcaaaaca------tgtacgtcttggatatgttccatttttgtttttcaattataactcaacaaacctgga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=1265.000000 s hg38.chr19_GL949753v2_alt 740818 4 + 796479 cata s panTro4.chr19 59940174 4 + 63644993 cata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885787 4 + 60714840 catt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366086 4 - 106955855 catt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55810193 3 + 59248254 -aaa i macFas5.chr19 C 0 I 327 s papAnu2.chr19 47917247 3 + 51301725 -aaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620905 3 + 50890351 -aaa i chlSab2.chr6 C 0 I 1 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669013 325 + 64156825 I a score=1231361.000000 s hg38.chr19_GL949753v2_alt 740822 577 + 796479 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacagagtttgattccagggtctccgctcctaaacacgaacctacactACTCTGATGTGAGGTTGTTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgagcccaggaa-----------------ggcgaggctgcagtgagctatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagacagagagagaaAGCAAAAGAAAGGAAGTAAGGAAGATAAAAATATAAGCTGCCTAATAATTATGGCATTCACTCAACAAGAAGAAaaagaaa---gaaagaggaaggaagggaggg----agggaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt s panTro4.chr19 59940178 576 + 63644993 ttttaatttaaaaataaataaaaaacttgtccaagatcataagtggcagagttgaaatctgcactcacggagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGTGTTGTCATAGACTGGTGTGGTGATGCATGCCTGCACACAGGAGTCAGAAAAACAAAGGTTGAGgctgggtgcggcggctcacaccagtcatcccagcactttgggaggccaaggtgggaggatcacttgagcccaggaa-----------------ggcgaggctgtagtgagccatgatcactgtacactagcctgggtgacagagtgagaccttgtctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAAATAAAAATATAAGCTGCCTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAA---Gaggaaggaagggagggagggaggaaggaaggaa--------ggaaggaaggaaATATATAAGC-GCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCCGTATTCtttttttgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56885791 567 + 60714840 ttttaatttaaaaataaataaataacttgtccaagatcataagtggcagagttgcaatctgcactcacggagtttgattccagggtctccactcgtaaacacaaacctacactgCTCTGATGTGAGGGTATTGTCATCGTCCAGTGTGGTGATGCACGTCTGCACACAGGAGTC-GGAAAACAAAGGTTGAGgctgggtgcggcggctcgcaccggtcatcccagcactttgggaggccgaggtgggaggatcgcttgagcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacaccagcgtgggtgacagagtgagaccttgtctc-aaaaaaagac--agagagaaaGCAAAAGAAAGGAAGTAAGG-AGAGAAAAATATAAGCTGCTTGATAATTATGGCATTCACTCAACAAGAAGAAAAAGAAG---GAGAAAG------aggaagga----agggaggga--------ggaaggaaagaaATATATAAGCTGCCTGATAATTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTATATTCTttttttgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103366090 569 - 106955855 tttaaatttaaaaataaataaaaaacttgtccaagatcgtaagtggcagagttgaaatctgcactcacagagtttgattccagggtctccactcctaaacacgaacctacactACTCTGATGTGAGGGGATTGTCATAGACCGGTGTGGTGATGCATGCCTGCACACAGGAGTcagaaaaacaaaggttgaggctgggtgcggcggctcacaccggtcatcccagcactttgggaggccaaggtgggaggatcgcttgatcctaggaa-----------------ggcgaggctgcagtgagccatgatcactgtacactagcctcggtgacagagtgagaccttatctc-aaaaaaagac----agagaaagcaaaagaaaGGAAGTAAGGAAGAGAAAAATATAAGCTGCCTGAAAATTATGGCATTCACTCAAC---AAGAAaaagaaa---gaaagaggaagggagagaggg----aggaaggaa--------ggaaggaaggaaATATATAAGCTGCCTGATAACTGTAACATTCACTCAGCAATATTTTCTCTTAATTTTCACTTAAGCAACTATTATGTGTCTGTCTGTATT-Tttttttgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669338 577 + 64156825 ttttaatttaaaaataaataaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGCGGTGATGCATGCCTGCACCCAGGAGTCAGT-AGACAAAGGTTGAGgccaggggcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaannnnnnnnnnnnnnnnn----------------gccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaAACCAAAAGAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAGAAgaaaaaagagaggaaggaaggaagggagagaggg----aggaagggagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTGTCTGTAttctttttttgtt i rheMac3.chr19 I 325 C 0 s macFas5.chr19 55810523 573 + 59248254 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcggagctgaaatttgcactcacagagtttgattctagggtctccactcctcagcacgaacctacactACTCTGATGTGAGGGTATTGTCGTAGTCCGGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTaagacaaaggttgaggccaggtgcggcggctcacaccggtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctacagtgagccatgatcactgtactccagcctgggtgacagagtgagaccttgtctcaaaaaaaagacaaagagagaaaacaaaagaAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAACAAgaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggtggaaggaaggaaggaaggaTATAAGCTGCCTGATAATCGTAACATTCACTCAGCA------------AATTTTCTCTTAGGCAACTATTAAGTGTCTCTCTGTATTCTTTTTTTGtt i macFas5.chr19 I 327 C 0 s papAnu2.chr19 47917250 565 + 51301725 ttttaaattaaaaataaataaataacttgtccaagatcataaGGGGCAGAGCTGAAATTTGCACTCACGGAGTTTGATTCTAGGGTCTCCACTCCTCAGCACGAACCTACACTACTCTGACGTGAAGGTATT---GTAGTccggtgtggtgatgcatgctcGCACACAGGAGTCAGTAAGATAAAGGttgaggccgggtgcggcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggactgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactgtactctagcctgggtgacagagtgagaccttgtctc-agaaaaagacaaagagagaaaacaaaagaaaggaagtaaggaagagaaaaatataagctGCCTGATAATTTTGGCATTCactcaacaagaagaaaaaagag----aggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggatataaGCTGCCTGATAATTGTAACATTCACTCAGGA------------AATTTTCTCTTAAGCAACTATTAAGTGTctgtctgtattctttttttgtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47620909 576 + 50890351 TTTTAATTTAAAAATAAAtaaataacttgtccaagatcataaggggcagagctgaaatttgcactcacggagtttgattctagggtctccactcctcaacacaaacctacactACTCTGACATGAGGGTATTGTCATAGTCCAGTGTGGTGATGCATGCCTGCACCCAGGAGTCAGTAAGACAAAGGTTGAGgccgggtgcagcggctcacaccagtcatcccagcactttgggaggccaatgtgggaggattgcttgagcctaggaa-----------------gtcgaggctgcagtgagccatgatcactatactccagcctgggtgacagagtgagaccttgtctc-aaaaaaagaccaagagagaaaaC----GAAAGGAAGTAAGGAAGAGAAAAATATAAACTGCCTGATAATTATGGCATTCACTCAGTAAGAAGAAAAAAAAA---Gaggaaggaagggagagaggg----aggaagagagggt----ggaaggaaggaaggaTATAAGCTGCCTGATAATTGTAACATTCACTCAGCAA-ATTGTCTCTTAATTTTCTCTTAAGCAACTATTATGTGTCTGTCTGTAttctttttttgtt i chlSab2.chr6 I 1 I 23 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=5010.000000 s hg38.chr19_GL949753v2_alt 741399 17 + 796479 gtttcatttgttttgtt s panTro4.chr19 59940754 6 + 63644993 gtttta----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56886358 17 + 60714840 gtttcgtttgttttgtt i ponAbe2.chr19 C 0 T 3941 s nomLeu3.chr10 103366659 10 - 106955855 gtttcgtttg------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669915 13 + 64156825 gttttgttttgtt---- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55811096 13 + 59248254 gttttgttttgtt---- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917815 13 + 51301725 gttttgttttgtt---- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=11914.000000 s hg38.chr19_GL949753v2_alt 741416 18 + 796479 ttgttttgttttgtttt-g s panTro4.chr19 59940760 14 + 63644993 ----tttgttttgtttt-g i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366669 14 - 106955855 ----tttgttttgtttt-g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60669928 18 + 64156825 tggttctgttttgttttg- i rheMac3.chr19 C 0 I 670 s macFas5.chr19 55811109 17 + 59248254 tggttctgttttgtttt-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917828 17 + 51301725 tggttctgttttgtttt-- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I a score=27800.000000 s hg38.chr19_GL949753v2_alt 741434 38 + 796479 agacggagtctcgctctgtcacccaggctggagtgcaa s panTro4.chr19 59940774 38 + 63644993 agacggagtctcgctctgtcgcccaggctggagtgcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366683 38 - 106955855 agatggagtctcgctctgtcggccaggctggagtgcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811126 31 + 59248254 -------gtttcgctctgtcgcccaggctggggtgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917845 31 + 51301725 -------gtttcgctctgtcgcccaggctggagtgcaa i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168.000000 s hg38.chr19_GL949753v2_alt 741472 7 + 796479 tggcata s panTro4.chr19 59940812 4 + 63644993 t---ata i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103366721 7 - 106955855 tggcaca i nomLeu3.chr10 C 0 I 267 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=162.000000 s hg38.chr19_GL949753v2_alt 741479 70 + 796479 tatatatatatatatatatatatatatatatatatatatatatatatatatatatatttttttttttttt s panTro4.chr19 59940816 22 + 63644993 tatatatatatatatatatata------------------------------------------------ i panTro4.chr19 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e nomLeu3.chr10 103366728 267 - 106955855 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=182.000000 s hg38.chr19_GL949753v2_alt 741549 2 + 796479 tt s nomLeu3.chr10 103366995 2 - 106955855 tt i nomLeu3.chr10 I 267 C 0 e canFam3.chr1 20086848 689 - 122678785 I e ponAbe2.chr19 56886375 3941 + 60714840 T e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59940838 0 + 63644993 C a score=13821.000000 s hg38.chr19_GL949753v2_alt 741551 32 + 796479 ttttttttttttttttgggaaacagaatctca s panTro4.chr19 59940838 29 + 63644993 ---tttttttttttttgggaaacagagtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882434 32 + 60714840 ttttttgttttttttttggagacagagtctca i ponAbe2.chr19 T 3941 C 0 s nomLeu3.chr10 103366997 32 - 106955855 tttttttttttttttttggagacagagtctaa i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621485 23 + 50890351 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=22690.000000 s hg38.chr19_GL949753v2_alt 741583 25 + 796479 ctctgttgcccaggctggagtgcag s panTro4.chr19 59940867 25 + 63644993 ctctgttgcccaggctggagtgcag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56882466 25 + 60714840 ctctgttgcccaggctggagtgcag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367029 25 - 106955855 ctctgttgcccaggctggagtgcag i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47621508 25 + 50890351 ctctgtcgcccaggctggggtgcaa i chlSab2.chr6 I 23 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47917876 0 + 51301725 C e macFas5.chr19 55811157 0 + 59248254 C e rheMac3.chr19 60669946 670 + 64156825 I a score=186777.000000 s hg38.chr19_GL949753v2_alt 741608 119 + 796479 tggcatgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatg s panTro4.chr19 59940892 119 + 63644993 tggcgtgatcccagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccaccatgcccagttaa-ttttgtatG i panTro4.chr19 C 0 M 469 s ponAbe2.chr19 56882491 119 + 60714840 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcatgtgccaccatgcccagttaa-ttttgtatg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367054 119 - 106955855 tggcgtgatcccagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatgcgccaccatgccccgttaa-ttttgtatg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811157 118 + 59248254 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagccattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47917876 118 + 51301725 tggcatgatctcggctcactgcaacctccgcctcccaggttgaagcaattcttctgcctcagcctagagagcagctgggattacaggcactcgccatcatgcccagctaatttttgta-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621533 118 + 50890351 tggcatgatctcggctcactgcaatctccgcctcccaggttgaagcaattcttctgcctcagcctagagagtagctgggattacaggcactcgccatcatgccgggctaatttttgta-- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=126884.000000 s hg38.chr19_GL949753v2_alt 741727 113 + 796479 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgtccacctcggcctcccaaagtgctggcattacaggcgtgagccacc s ponAbe2.chr19 56882610 113 + 60714840 tttagtagagacagggtttcaccacgttggccgggctgatctcgaactcccgacctcaggtgatccgcccacctcggcctcccaaagtgctggcattacaggcgtgagccacc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367173 110 - 106955855 tttagtagagacagggtttcaccatgttagccaggctgatctcgaactcctgacctcaggtgatccgctcacctcggcctccca---tgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811275 107 + 59248254 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i macFas5.chr19 C 0 I 49 s papAnu2.chr19 47917994 107 + 51301725 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgaaccacc i papAnu2.chr19 C 0 I 33 s chlSab2.chr6 47621651 107 + 50890351 ttttgtaga------gtttcaccatgttggccagtctggtcttgaacctctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccacc i chlSab2.chr6 C 0 I 44 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=2560.000000 s hg38.chr19_GL949753v2_alt 741840 10 + 796479 gtgcccgacc s ponAbe2.chr19 56882723 10 + 60714840 gcgcctggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367283 10 - 106955855 gcgcccggcc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811431 10 + 59248254 aaaTCCCATC i macFas5.chr19 I 49 C 0 s papAnu2.chr19 47918134 10 + 51301725 aaatcccatc i papAnu2.chr19 I 33 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47621758 44 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=55725.000000 s hg38.chr19_GL949753v2_alt 741850 45 + 796479 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAAAAAAGGTATA s ponAbe2.chr19 56882733 45 + 60714840 AGGAATTAAAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367293 45 - 106955855 AGGAATTAGAAATAGACAACCACCACCAAGAT--AAATAAAGGTATA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811441 47 + 59248254 AGGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918144 47 + 51301725 agGAATTAAAAATAGACAACCATCACCAAGGTAAAAATAAAGGTATA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621802 45 + 50890351 AGGAATTAAAAATAGACAACCATCACCAAGGT--AAATAAAGGTATA i chlSab2.chr6 I 44 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I e panTro4.chr19 59941011 469 + 63644993 M a score=410147.000000 s hg38.chr19_GL949753v2_alt 741895 280 + 796479 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagcgagaagagagtatttgagtctgaccctgaaagaagtaatgaggcagccaggctggtccattctagtagcagagaggaggccagtgatgctgtggaggggagtgaggcagggaagaggggagggagGCAGGATTTATAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA s panTro4.chr19 59941489 271 + 63644993 CTTCACATACCAGATAGTG-GGAGG-CCACTT-GACTAGG-TGGTGGGG-ATATACTTAGTGAGA-GAGAGCATTTGAGTCTGACCC-GAAAGAAGTA-TGAGGCAGCCAGGCTGGTCCACTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGTGAGGCAGGGAAGAGGGGAGGGAGGCAGTATT-ACAACGCGGAATAGA-CCACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaacttaaTTA i panTro4.chr19 M 469 C 0 s ponAbe2.chr19 56882778 260 + 60714840 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagagagcatttgagtctgaccccaaaagaagtaatgaggcagccaggcTGGCCCATTCTAGTAGCAGAGAGGAGGCCGGTGATGCTGTGGAGGGGAGAGAGGCAGG--------------------ATTTACAATGCGGAATAGA-ACACAGTGCAGCTggccaggaattagggtggcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367338 281 - 106955855 CTTCACATACCAGATAgtgaggagggccactttgactagggtggtgggggatatacttagtgagaagacagcatttgggtctgaccccgaaagaagtaatgaggcagccaggcTGGTCCATTCTAGTAGCAGAGAGGAGGCGGGTGATGCTGTggaggagagtgaggcagggaagaggggagggaggcaggATTTACAACGCGGAATAGACCCACAGTGCAGCTggccaggaattagggtagcgtgagtgaggcactctcctgggatgtaaaatttaaTTA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811488 257 + 59248254 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCgggccgggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47918191 257 + 51301725 CTTGACATACCAGATAGTGAGGAGGACCATTTTGACTAGGGTGGTGGGGTAAATACTTAATAAGAAGATGGCATTTGAGTCTGACCCCAAAAGAAGTAATGAGGCGGCCAGGCTGGTCCATCCTAGCAGCAGAGAG-----------------------GagtgagggaggaaagaggggaggTAGGCAGAATTTACAACGCGGAATAGA-CCACAGTGCAGCGGGCCAGGAATTAGGCTGGCATGAGTGAGGCACTCTCCTGGGatgtaaaatgtaatta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47621847 257 + 50890351 CTTGACATACAAGATAgtgaggagggccattttgactagggtgatggggtaaatacttaataagaagatggcatttgagtctgactccaaaagaagtaatgaagcggccaggcTGGTCCATCCTAGCAGCAGAGAG-----------------------GAGTGAGGGAGGAAAGAGGGGAGGTAGGCAGAGTTTACAACGCAGAAGAGA-CCACAGTGCAGCgggccaggaattagggtggcatgagtgaggcactctcctgggatgtaaaatgtaaTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20086848 689 - 122678785 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=168891.000000 s hg38.chr19_GL949753v2_alt 742175 101 + 796479 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GAAAGA---------------- s panTro4.chr19 59941760 101 + 63644993 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGACGAGTAGGTCGTTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTCCCCT--------GGAAGA---------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883038 105 + 60714840 TTCCCAAAC----AACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGATCATTAAAACTCAC--ATTATTCT--GTTTGAA-----TACTTTATTTCTTCCCCCGAAAGAAAGA---------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367619 105 - 106955855 TTCCCAAACAATTAACATATTTGAAAAAATTATTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--GTTTCAA-----TACTTTATTTATTCGCCT----GAAAGA---------------- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811745 100 + 59248254 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGCAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCGT--------GAAAGA---------------- i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47918448 100 + 51301725 ttcCCAAACAattaacatatttgaaaaaatgtttgcaaatttgAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAA-----TAC-TTATTCCCgt--------gaaaga---------------- i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47622104 105 + 50890351 TTCCCAAACAATTAACATATTTGAAAAAATGTTTGAAAATTTGAAGAGTAGGTCATTAAAACTCAC--ATTATTCT--ATTTGAATACTTTAC-TTATTCCCCT--------GAAAGA---------------- i chlSab2.chr6 C 0 I 446 s canFam3.chr1 20087537 115 - 122678785 TTTCCAGGCTATTAAC--AGTTGAAAAAA---TTGAAAAACTTTAAAGTAGGCTATTAAAACTCACaaattattttaagtttaaa-----tat-ttatttatac--------aaaaaaaatactttttaaagaa i canFam3.chr1 I 689 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e rheMac3.chr19 60669946 670 + 64156825 I a score=20163.000000 s hg38.chr19_GL949753v2_alt 742276 14 + 796479 TTTATTAGAATTTT s panTro4.chr19 59941861 14 + 63644993 TTTATTAGAATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883143 14 + 60714840 TTTATCATGATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103367724 14 - 106955855 TTTATTAGGATTTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55811849 14 + 59248254 TTTATTATGAtttt i macFas5.chr19 I 4 I 155 s papAnu2.chr19 47918552 14 + 51301725 tttattatgatttt i papAnu2.chr19 I 4 I 1288 s canFam3.chr1 20087652 14 - 122678785 tttattatCCTTTT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e rheMac3.chr19 60669946 670 + 64156825 I a score=15046.000000 s hg38.chr19_GL949753v2_alt 742290 27 + 796479 -ACATTCTAGGCTTTTGTGGATGCAAGC s panTro4.chr19 59941875 27 + 63644993 -ACATTTTAGGCTTTTGTGGATGCAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56883157 27 + 60714840 -ACATTCTAGGCTTTTGTGGTTGCAAGC i ponAbe2.chr19 C 0 I 7304 s nomLeu3.chr10 103367738 27 - 106955855 -ACATTCTAGGCTTTTGTGGATGCAAGC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087666 27 - 122678785 AATTCTCCTGACTTTAG-GGAAACAAAT i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=24636.000000 s hg38.chr19_GL949753v2_alt 742317 65 + 796479 GCATCAGTGCTATTTCCAAAACCTACTTCTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg s panTro4.chr19 59941902 65 + 63644993 GCATCAGTGATATTTCCAAAACCTACTTTTAGAAAA----TAACCATTTAAAAGTGCACTA-------ACTGGgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367765 69 - 106955855 CCATCAGTGATAGTTCCAAAACCTACTTCTAGAAAATAATTAACCATTTAAAAGTGCACTA-------ACTGGgtg i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20087693 70 - 122678785 TCATCAATGATATTTTCAAAATCTG--TTCAGAAAA----TTACCATTTAAAAATGCTTTAGAgggacactgggtg i canFam3.chr1 C 0 I 698 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=156861.000000 s hg38.chr19_GL949753v2_alt 742382 622 + 796479 cacctatagtcccagctactagggaggaccacttgagcccagggatttgaggctaaagtgagctatgatcatgcctgtgaatacagcgagtgtactaaagcctgggcaacatagtaagacctcttctctt----------tttttttttttcccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcaccgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattatt--------ttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaagtactgggattacaggcgtgagccgccgcgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaAATTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataatatagttgtgtctat s panTro4.chr19 59941967 635 + 63644993 cacctatagtcccagctactagggaggaccacttgagcccagggggttgaggctaaagtgagctatgatcatgcctgtgaatatagcgagtgtactaaagcctgggcaacatagtaagacctcttctcttctc-----ttttttttttttttccaagacggagtcttgctctgtcgcccaggctggactgcagtggtgcaatctcggctcactgcctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacaggagtgcgccaccgcgcccagctaattattattattatttttttttttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgaccttaagtgatccacccacctcagcctcccaaattactgggattacaggcatgagccgccgtgcccggcccaacctcttctcttaaaaaaaataaataa----------ataagaaaagaaaTTAGAATATTTGCACCAATCaagagtctaaggagacataaatactaaatgcactgtggggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtgtctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103367834 628 - 106955855 cacctgtagtcccagctactagggaggaccacttaagcccaggggtttgaggctaaagtgagctatgatcgtgcctgtgaatgt--------------agcctgggcaacatagtaagacctcttctcttctcttttttttttttttttttcccaagacggagtcttgctctgtcgcccaggctggagtgcagtggtgcagtctcggctcactgtctcccaggtttaagcgattctcctgcctcagcctccggagtagctgggattacagacgtgcgccaccgtgcccagctaattatttttatt-------ttttttaagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgaccttaagtgatccacccgcctcggcctcccaaagtactgggattacaggcgtgagccactgcgcctggcccaacctcttctctaaaaaaaaaaaaaaaaaaaaagaaagaaaagaaaagatattagaatattcgcaccaatcaagagtctaaggagacataaatactgaatgcactgt-gggccctggacggggtctgggaacagaaataggatattagtggaaagactggtgaaattcaaatagcctggagtttacttgatataacatagttgtatctat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e macFas5.chr19 55811863 155 + 59248254 I e rheMac3.chr19 60669946 670 + 64156825 I a score=73429.000000 s hg38.chr19_GL949753v2_alt 743004 244 + 796479 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcgtgatcacagctccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa s panTro4.chr19 59942602 244 + 63644993 ggttagttt----tttgtttgtttt--ttgatacagggtctcactctgtcacccaggctggagtgcagtggcatgatcacagctccctgcagcctcggcctccctggctcaagtgatcctcctgcctcagcctcctgagtagctgggactataggcgtatgccaccatgccccactaatttttaatttt----------gtttaaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactcctgagctcaagcaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368462 233 - 106955855 ggttagttttttgtttgtttgtttt--ttgatacagggtctcactctgtcacc--------------gaggcatgatcacagttccctgcagcctcggcctccctggctcaagcgatcctcctgcctcagcctcctgagtagctgggactataggtgtatgccaccatgccccactaatttttaatttt-----------tttgaagat--gaggtctcactatgttgcccaggctg-------------------------------gtcttgaactccggagctcaagcaa i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812018 256 + 59248254 ggctaattt----ttttgtatttttagtagagacagggtttcactgtgttagccaggatg-------------------------------gtctccatctcttggcctt--gtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgtctggccTATGGTTAGttttttgtttgtttgtttgttgatacaggatcttactctgtcacccaagctggagtgcagaggcacgatcacagctctctgtagcctcagcctccctggctcaagtgg i macFas5.chr19 I 155 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e chlSab2.chr6 47622209 446 + 50890351 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=21961.000000 s hg38.chr19_GL949753v2_alt 743248 24 + 796479 tcctcccgcctcagcctcccaaag s panTro4.chr19 59942846 24 + 63644993 tcctcccgcctcagcctcccaaag i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368695 24 - 106955855 tcctcccacctcagcctcccaaag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55812274 24 + 59248254 tcctcctgcctcagcctcccaaag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622655 24 + 50890351 tcctcctgcctcagcctcccaaag i chlSab2.chr6 I 446 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I e rheMac3.chr19 60669946 670 + 64156825 I a score=418039.000000 s hg38.chr19_GL949753v2_alt 743272 327 + 796479 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattactccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcacggtggcccgtgaccgtagtccctgctactcatgaggctgaggcaggaggattgctcaaggcaaggagctccaggctgcagtgagctatgactgct----------cctatgaacagccactgcactccggcctgggcagtgtagcaagac s panTro4.chr19 59942870 327 + 63644993 tgctgggattacaggtgtaaaccactgggaccagtgctacgtttattttttggttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatatttccattaatattatctttggaacttttctgtcagtctaaaaattattccaaaacaaagtt-----ttaaaaaGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagctccaggctgcagtgagctatgactgct----------ccagtgaacagccactgcactgcagcctgggcagcgtagcaagat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103368719 327 - 106955855 tgctgggattacaggtgtaaaccactgggaccagtgctatgtttattttttagttgtaacaaatgtaagacgttaacatgaggggatcccgggtgaaatatttccattaatattatctttgcaacttttctgtcagtctaaaaattattccaaaacaCACTT-----TTAAAAAGAATCCCGAgccaagcatggtggcctgtgactgtagtccctgctactcgtgaggctgaggcaggaggattgctgaaggcaaggagctccaggttgcagtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggcaatgtagcaagac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670616 342 + 64156825 tgctgggattacaggtgtgagccacTGGGACCAGTGCTGtgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgctctgcagtgagctggtgaacagccactgcgctccagcctggaccacatagcaagag i rheMac3.chr19 I 670 C 0 s macFas5.chr19 55812298 332 + 59248254 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaatattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattgcttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctggaccacatagcaagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47622679 332 + 50890351 tgctgggattacaggtgtgagccacTGGGACCAGTGCTatgtttattttttagttgtaacaaatgtaagatgttaacatgaggggatcctgggtgaaacattttcattaatattatctttgcaacttttctgtcagtctaaaaatgattccaaaaccaagtttttaattaaaaaGAATCCTGAgccaagcatggtggcctgtgactgtagtccctgctactcatgaggctgaggcaggaggattggttaaggcaaggagttccaggctgccgtgagctatgattgct----------cctgtgaacagccactgcactccagcctgggccacatagcaagag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I e papAnu2.chr19 47918566 1288 + 51301725 I a score=1004241.000000 s hg38.chr19_GL949753v2_alt 743599 620 + 796479 cccatcGCTAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGTTGCCTGtttttcgttttggcacagactctggtatgacttgacacaggcactggctgattctgcctttatttgaaattctgg-ttttttt--cattgtggatgtttttgcaatttattttgatttttttaaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgaaatcccaacactttgggaagccaaggtggaaggatagcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctctcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctat-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcctagctacttggagggctgaggcgggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgctctccaccctgggtgacgcagcaagaccctgtgtccaaaaaac-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa s panTro4.chr19 59943197 619 + 63644993 cccatcGCTAATTTTTTTAAGTGCATTAAAACA--GATAAAGGGGCGCCTGtttttcgttttggcacagactctggtatgacttggcacagacactggctgattctgcctttatttgaaattctgg-ttttttt-tcatcgtggatgtttttgcactttattttgattttttttaaaattgcatgaaaatgttattcacagccagatgcagtggctcacgcctgtaatcccaacactttcggaagccaaggtggaaggattgcttgagcccacaggagttcgagaccagcctgagcaacatagcgagaccctatctctctgtcttttgtattttaatgccttttgtgaaaactgtcaagagaccccatctctgt-aaaaacataaaaaatgagctgggcgtggtggtgcacacctgtaatcccagctacttggagggccgaggcaggagaatcgcttgagccctgg---aggtggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgacgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaatgtcgtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369046 607 - 106955855 cccatctctaaTTTTTTTAAGTGTGTTAAAACACAGATAAAGGGGTGCCTGtttttcgttttggcacagcttctggtatgacttggcacaggcactggctgattctgcctttatttgaaattctga-ttttttt-ttatcgtggatgtttttgcaatttatt----ttttttt---aattgcattaaaatgttattcacagacagatgcagtggctcacgcctgttatcccaacactttgggaggccaaggtggaaggattgcttgagcc--caggagttcgagaccagcctgagcaacacagcgagaccc--tctctctctcttttgtattttaatgccttttgtgaaaactgtcaggagaccccacctctac-aaaaacataaaaagtgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcgcttgagcctggg---aggcggaggctgcagtgagccaagatcgcgccactgcactccaccctgggtgatgcagcaagaccctgtgtccaaaaaat-----aaaatattattcacattgatccataaat---gtggcaccaccacccgctaggccagtgcctcgtttgcctc------------accctaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60670958 611 + 64156825 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattctcacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatgttattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55812630 611 + 59248254 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------ttggcacaggcactgcctgattctgcctttatgtgaaattctga-tttttttttcatcgtggatg-gtttgcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaaacccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaacaaaacaaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgccctaattccggccctAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47919854 612 + 51301725 cccgtctctaatttttttaagtgcattAAAACACAGATAAAGGAGTGCCTGTCTTTCGTT----------------------TTGGCACAGGCACTGCCTGATTCTGCCTTTATgtgaaattctgattttttttttcatcatggaTG-GTTTGcgatttcttttgattttttaaaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtggaaggattgcttgagcc--caggagtttgagaccagtctaatcaacatagcaagaccc--tctctctctcttt--tattttaatgccTTTTGTGAAAACTGTcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctactcggagggctgaggcaggagaatcacttgaacttagg---aggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcAGCAAGGCCCTgtgtccaaaaaacaaaacaaaatattattcacaTTGATCCATAAATGTTGTGGCACCACCACCCGCTAGGCCAGTGCCTGGTTTGCCTTGCCCTAATTCTGGCCCTAA i papAnu2.chr19 I 1288 C 0 s chlSab2.chr6 47623011 632 + 50890351 cccatctctAATTTTTTTAAGTGCATTAAAACACAGATAAAGGGGTGCCTGtttttcgttttagcacaggctctggtatgacttggcacaggcactgcctgattctgcctttatttgaaattctga-tttttttttcatcgtggatg-gtttgccatttattttgattttttttaaaattgcattaaaatgttattcacacccagatgcagtggctcaggcctgtaatcccaacactttgggaggccaaagtgggaggattgcttgagcc--caggagtttgag---agcctaagcaacatagcgagaccc--tctctctctcttt--tattttaatgccttttgtgaaaactgtcaagagaccccatctccacaaaaaaaattaaaaatgagctgggcatggtggtgcacacctgtagtcccagctacttggagggctgaggcaggagaatcacttgaacttaggataaggtggaggctgcagtgagccaagatcgcaccaccgcactccagcgtgggtgacgcagcaaggccctgtgtccaaaaaat-atataaaatattattcacattgatccataaatgttgtggcaccaccacccgctaggccagtgcctggtttgcctcgtcctaattccggccctAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20087763 698 - 122678785 I e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=16400.000000 s hg38.chr19_GL949753v2_alt 744219 8 + 796479 tccctgcc s panTro4.chr19 59943816 8 + 63644993 cccctgcc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369653 8 - 106955855 tccctgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671569 8 + 64156825 TCCCTGCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813241 8 + 59248254 TCCCTGCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920466 8 + 51301725 TCCCTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623643 8 + 50890351 TCCCTGCT i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20088461 8 - 122678785 TCGCTGTC i canFam3.chr1 I 698 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I e calJac3.chr22_GL285922_random 36981 3745 + 138250 I a score=755687.000000 s hg38.chr19_GL949753v2_alt 744227 264 + 796479 ctCAATGTCCCCCGTATTTGTGTCCTGAA---CGGAGGAC-CACGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCCGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG s panTro4.chr19 59943824 264 + 63644993 ctCAATGTCCCCCATATTTGTGTCCTGAA---TGGAGGAC-CGCGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAATGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACTGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103369661 264 - 106955855 ctCAATGTCCCCCGTATTTGTGTCCTGAA---TGGAGGAC-CACGCAGTCCCAGGCTCTGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCTGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCCAGATGTGTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTAGCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671577 264 + 64156825 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813249 264 + 59248254 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGATGTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGATCCTGGTACCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920474 264 + 51301725 CTCAGTGTCCCCCATGTTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCGATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACGTTTCTTCATGGCCGGGATGAAGAGCACCGCCTGATCCTGGTAACTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGTCCCTGGCACCGGAGGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623651 264 + 50890351 CTCAATGTCCCCCATATTTGTGCCCTGAA---CGGAGGAC-CAGGCAGTCCCAGGCTCCAATCCCCCTTCCTTTACCGGTGGCAACGAGCTCCAGCTGGTCGCTGGGCAGGGACCAGAGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCGGCCAGACTTCTCTTCATGGCCGGGATGAAGAGGACCGCCTGGTCCTGGTATCTGCTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACGCCCGGAGGCCCCTGGCACCGGAGGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 40726 264 + 138250 ccTAACATCCCCCATATTCGTGTCCCGAA---CGGAGGCC-CATACAGTCCCAGGCTACAATCCCCTGTCCTTTACCAGTGGCAATGAGCTCCAGCTGGTCGCTGGGCGGGGACCAGCGGCTTCCGTTCTGGTAGGAGCAGCGGTAGCGTCCAGCGTCACTTTGCTTCATGGCCGGGATGAGGAGGACCGCCTGATCCCGGTAGCTGTTGGAACTCAGCTTCTCCAGGCGGTACAGGTCCACACCCGGAGGTCCCTGGCACCGGAGGG i calJac3.chr22_GL285922_random I 3745 C 0 s canFam3.chr1 20088469 265 - 122678785 ATCATCATCCCCCTCTTCACCCTCCTGGAGCCCTGAGGCCACAGGTGGCCCC---CTCCCATGCCCTTCCAGGTACCAGTGGCCACCAGCTCCAGCTGGTTGCTGGGGGGAGACCAGAGGGTCCCGTTCTGGTAGGAGCAGCGGTAACACCCAGCGAAACTTTCCTCCATGGTCTTGATGAAGAGGACAGGCCGATCCTGGTATTTCCGGGACCTCAGCTTCTCCAGGCGGTACAAGTCCACGTCTGGAGGCCCCTGGCAGCGGATGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56883184 7304 + 60714840 I a score=1529597.000000 s hg38.chr19_GL949753v2_alt 744491 483 + 796479 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCTGG--ACCCCGCTGCTCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCGGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TAATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gaggGC s panTro4.chr19 59944088 483 + 63644993 TCACTGGCTTCT-CCAGCGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCGCCAGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTGCTGGGCGCAGTGATAAGACATTTGCATGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCAAAAGACACACAGGAATGTAATTtaagtg---agagaaaccggtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagatggagaagaaagcagatccatggctg--------ggggtggt-gggagag-gagggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890488 482 + 60714840 TCACTGGCTTCTCCCAGGGGCACCA-GGAGCTGGGCAGAG-CTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CCACCTGG--GCCCCGCTGCCCC--CGCGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTTTGTGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCGTGCCTGCTGGTCGTGGTGATAAGACATTTGCGTGCATATGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---agagaagccagtcagaaaaagccatgtagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacggagaagaaaacagatccatggctg--------gcggtggt-gggagag-gagggt i ponAbe2.chr19 I 7304 C 0 s nomLeu3.chr10 103369925 483 - 106955855 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTGGGGAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACC-CTGCCTGG--GCCCCACTGCCGC--CACGCTGGCGGATCCCT----------CAGGAGGGAAGGGGTCT-GGGGAAGGACTCACCACTCTGCGCTGG---CACACGCCCCAGACATAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACTCGCTTTTATGGACATTCCTGCCTACTGGACACGGTGATAAGACATTTGCATGCATGTGCTTTACTCTGTCCTAA----TTATTTCTTCaaaagacacacaggaatgtaatttaagtg---ggagaagccagtcagaaaaagccacatagtttatgaggtcatttacatgaaatatccagaataggtaaatcta-taggagacagagaagaaaacagatccatggctg--------ggggtggt-ggaagag-gagggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60671841 490 + 64156825 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTCGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55813513 490 + 59248254 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATACCAGGACGCGCTCGTAGGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAGAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatagtctatgaggtcgtttacatgaaatatccagaataggtaaatcta-tagaaggaggagaagaaaacagatccacggctg--------ggggaggg-gggagag-gagggc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47920738 490 + 51301725 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGTGGGCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGTCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCcctgaggaaagaagaaagggaccAGATGCCAGGACGCGCTTGTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTgtgctaattatttatttcttcaaaagatacatgtgcatgtaatttaagtg---agagaagccagtcaGAAAAAGCCACATAGCCTATGAGGTCGtttacatgaaatatccagaagAGGTAAATCTA-TAGAAGACGGAGAAGAAAACAGATccatggctg--------ggggtggg-gggagag-gaggGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47623915 490 + 50890351 TCACTGGCTTCT-CCAGGGGCACCAGGGAGCTGGGCAGAGCCTGGAGGGAGGGCTTAGGCAGCGGTCCTGGAAGAGGAGCAGGGCTGGGTCAGCCTCCCCGCAGACG-CCGCCTGG--GCCCCGCTGCCCTGGCACGCTGGCGGATCCCG----------CAGGAGGGAAGGGGCCTGGGGGAAGGACTCACCTCTCTGCGCTGG---CACATGCCCCAGACACAGCCCTGAGGAAAGAAGAAAGGGACCAGATGCCAGGACGCGCTTTTATGGACATTCCCGCCTGCTGGGCGCGGTGATAAGACATTTGCACGCATATGCTTTATTCTGTCCTAATTATTTATTTCTTCAAAAGATACATGTGCATGTAATTtaagtg---agagaagccagtcagaaaaagccacatcgtctatgaggtcatttacatgaaatctccagaataggtaaatctg-tagaagacggagaagaaaacagatccatggctg--------ggggtggt-gggagag-gagggc i chlSab2.chr6 C 0 I 615 s calJac3.chr22_GL285922_random 40990 468 + 138250 TCACTGGCTTCT-CCAGAGGCACCAGGGAGCTGGGCACAGCCTGCAGGGAGGGCTTGGGGAGTGGTCCTGGAAGAGGAGCAGAGCTGGGTCAGCCTCCCTGCAGACC-TCGCCTGG--AACCCACTTCCCCCACCTGCTGGTGGATCCCA----------CAGG--------------AGGGAAGGACTCACCGCTCTGTGCTTG---CACATGCCCCAGACACAGCCCTGAGGAGAGAAGAAAGAGACTAGAGGCCAGGACTGACTTTTATAAACACTGCTGCCTGCTGGGTGCGGCGACAAGACATTTGCATGCCTGTGCTTTATTCTCTCCTAATCACTTATTTCTTCAAAAGACAcacaggcatgtaatttgagtg---agagaagccagtcagaaaaagccacattgtttacgatgtcatttatatgaaatatccagaaggggtaaatcta-cagaagacag----------agacacatggctg--------ggggtggtcgggagagcgaggac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20088734 490 - 122678785 TCACCTGCGTCT-TCAGGGGTGCTAGGGAGCTAGGCAGAGCCTGGAGGGAGGGCTTGGGCAGGGTACCTGGAAGGGAAGCAGAATT---------TCCAAACAGACCTCCTCCTGGGTGCTCCCCTCCTCC--CACCCTCCTGGCCCTTGTGCAGGCACCCAGATCCAGAGGATTCCAGGGGAAGGACTCACCAAGCTGTGCTTGCACCACCTGCCCCAGACACAGCCCTGAGCAGAGAAGAAAAGCACCACCTGCTAGCATCTCCTGGAGGCCACACTTCTGCACGCAGAGCA-GGTAATGCCACATCTTCAGGCAGTCACTTTCTTCTGTCCTCAT---TTGCTT-----AAGGACACACACTCacataatttgagtgccagaagaagccagccacagaaggccacatattgtatgattccatttatctgaaacatgctcactaggtaaatctgctcagacatggag--------agattagtggttgccagaaactggggggt-gggtggc-aggggc i canFam3.chr1 C 0 C 0 a score=4279.000000 s hg38.chr19_GL949753v2_alt 744974 3 + 796479 AAG s panTro4.chr19 59944571 3 + 63644993 gag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890970 3 + 60714840 gag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370408 3 - 106955855 gag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672331 3 + 64156825 gag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814003 3 + 59248254 gag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921228 3 + 51301725 GAG i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 41458 3 + 138250 gag i calJac3.chr22_GL285922_random C 0 I 1290 s canFam3.chr1 20089224 1 - 122678785 -a- i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47624405 615 + 50890351 I a score=14793.000000 s hg38.chr19_GL949753v2_alt 744977 11 + 796479 GCATGGTGGCG s panTro4.chr19 59944574 11 + 63644993 gcgtggcggca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890973 11 + 60714840 gcgtggcggcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370411 11 - 106955855 gcgtggcggca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672334 11 + 64156825 acgtggcggcg i rheMac3.chr19 C 0 I 599 s macFas5.chr19 55814006 11 + 59248254 acgtggcggcg i macFas5.chr19 C 0 I 592 s papAnu2.chr19 47921231 11 + 51301725 ACGTGGCGGCG i papAnu2.chr19 C 0 I 577 s canFam3.chr1 20089225 5 - 122678785 ---ttgag--- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I a score=17543.000000 s hg38.chr19_GL949753v2_alt 744988 32 + 796479 TACTGCTCTCTGTGGACTTG--TTCGTGTTAGAC s panTro4.chr19 59944585 32 + 63644993 tactgCTATCTGTGGACTCG--TTCGTGTTAGAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56890984 32 + 60714840 tactgCTATCTGTGGATTCG--TTCGTGTTAGAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370422 32 - 106955855 tactgCTATCTGTGGATTCA--TTCATGTTAGAC i nomLeu3.chr10 C 0 C 0 s canFam3.chr1 20089230 34 - 122678785 gagtgattttcatgggcatgatttccttttagac i canFam3.chr1 C 0 I 2803 e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=25291.000000 s hg38.chr19_GL949753v2_alt 745020 63 + 796479 ACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTC s panTro4.chr19 59944617 62 + 63644993 ACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG-GGGCTCGTTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891016 63 + 60714840 ACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC i ponAbe2.chr19 C 0 T 84 s nomLeu3.chr10 103370454 63 - 106955855 ACTGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTCGTGTTAGACGCCGTGGATTCGTTC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=300.000000 s hg38.chr19_GL949753v2_alt 745083 1 + 796479 G s panTro4.chr19 59944679 1 + 63644993 G i panTro4.chr19 C 0 T 84 s nomLeu3.chr10 103370517 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=8898.000000 s hg38.chr19_GL949753v2_alt 745084 170 + 796479 TGTTAGACACGGTGGGCTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTAGACGCGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACG s nomLeu3.chr10 103370518 155 - 106955855 TGTTAGACGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTCGCGTTAGGCGCCGTGGATTCGTTC-----GTGTTAGACGCCGTGGATTCGTTC-----GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891079 84 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944680 84 + 63644993 T a score=33146.000000 s hg38.chr19_GL949753v2_alt 745254 73 + 796479 GTGGACTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACACGGTGGGTTCGTTCGTGTTAGACGCGG s panTro4.chr19 59944596 73 + 63644993 GTGGACTCGTTCGTGTTAGACACGGTGGGCTCGTTCGCGTTGGACGCGGAGGGTTCGTTCGTGTTAGACGCGG i panTro4.chr19 T 84 M 773 s ponAbe2.chr19 56890995 73 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTC i ponAbe2.chr19 T 84 C 0 s nomLeu3.chr10 103370673 73 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTG i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I a score=6150.000000 s hg38.chr19_GL949753v2_alt 745327 28 + 796479 TGGGTTCGTTCGTGTTAGACGCGGTGGA s ponAbe2.chr19 56891068 28 + 60714840 TGGATTGGTTCGTGTTAGACACTGTGGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370746 28 - 106955855 TGGATTCATTCGTGTTAGGCGCTGTGGA i nomLeu3.chr10 C 0 T 120 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=671.000000 s hg38.chr19_GL949753v2_alt 745355 12 + 796479 CTCCTTCGTGTT s ponAbe2.chr19 56891096 12 + 60714840 TTCGTTCGTGTT i ponAbe2.chr19 C 0 T 113 s nomLeu3.chr10 103370654 7 - 106955855 TTCGTTC----- i nomLeu3.chr10 T 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=677.000000 s hg38.chr19_GL949753v2_alt 745367 12 + 796479 GTGTTAGACACG s nomLeu3.chr10 103370661 12 - 106955855 GTGTTAGGCGCC i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 113 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=25015.000000 s hg38.chr19_GL949753v2_alt 745379 118 + 796479 GTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTAGACACGGTGGACTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT s ponAbe2.chr19 56890995 113 + 60714840 GTGGATTCGTTCGTGTTAGACACTGTGGATTCGTTCGTGTTAGACACGGTGGATTCGTTCGTGTTAGACATTCTGGATTGGTTC-----GTGTTAGACACTGTGGATTCGTTCGTGTT i ponAbe2.chr19 T 113 T 29 s nomLeu3.chr10 103370673 113 - 106955855 GTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 C 0 T 101 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949753v2_alt 745497 58 + 796479 GTGTTAGACACGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGACTCGTTCGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 101 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=6514.000000 s hg38.chr19_GL949753v2_alt 745555 106 + 796479 GTGTTAGACACGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTAGACGCGGTGGGCTCGTTCGTGTTGTGTTAGACACGGTGGGCTCGTTCGTGTT s nomLeu3.chr10 103370685 101 - 106955855 GTGTTAGGCGCCGTGGATTCGTTCGTGTTAGGCGCCGTGGATTCGTTCGTGTTAGACGCTGTGGATTCATTC-----GTGTTAGGCGCTGTGGATTCGTTCGTGTT i nomLeu3.chr10 T 101 T 12 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=0.000000 s hg38.chr19_GL949753v2_alt 745661 29 + 796479 GTGTTAGACACGGTGGGCTCGTTTGTGTT e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56891108 29 + 60714840 T e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=932.000000 s hg38.chr19_GL949753v2_alt 745690 12 + 796479 GTGTTAGACACG s ponAbe2.chr19 56891079 12 + 60714840 GTGTTAGACACT i ponAbe2.chr19 T 29 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e papAnu2.chr19 47921242 577 + 51301725 I e macFas5.chr19 55814017 592 + 59248254 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=600.000000 s hg38.chr19_GL949753v2_alt 745702 1 + 796479 G s ponAbe2.chr19 56891091 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814609 1 + 59248254 g i macFas5.chr19 I 592 C 0 s papAnu2.chr19 47921819 1 + 51301725 G i papAnu2.chr19 I 577 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 41461 1290 + 138250 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2241.000000 s hg38.chr19_GL949753v2_alt 745703 4 + 796479 TGGG s ponAbe2.chr19 56891092 4 + 60714840 TGGA i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55814610 4 + 59248254 tgga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921820 4 + 51301725 TGGA i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42751 4 + 138250 TGTG i calJac3.chr22_GL285922_random I 1290 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e nomLeu3.chr10 103370786 12 - 106955855 T e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=2949.000000 s hg38.chr19_GL949753v2_alt 745707 4 + 796479 CTCG s ponAbe2.chr19 56891096 4 + 60714840 TTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370774 4 - 106955855 TTCG i nomLeu3.chr10 T 12 C 0 s macFas5.chr19 55814614 4 + 59248254 ttcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921824 4 + 51301725 TTCC i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 42755 4 + 138250 TTCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e chlSab2.chr6 47624405 615 + 50890351 I e rheMac3.chr19 60672345 599 + 64156825 I e panTro4.chr19 59944669 773 + 63644993 M a score=427215.000000 s hg38.chr19_GL949753v2_alt 745711 211 + 796479 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTGAGACATTGCTGTCCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTACATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACtattgcatattgtatattattgt----attttattgtctatgtaatatATGCGATA s ponAbe2.chr19 56891100 211 + 60714840 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGGTGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTACAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTATTGT----ATTTTATTGTCTATGTAATATATGCGATA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370778 211 - 106955855 TTCGTGTTAGACA-TTGCCCATTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGACATTGCTGTTCCTTCGTTTCCTCCCTTCAGTCTCCCAATATTAAATAATATCCAA---GTGCATTCCAATAGTATGCAATTGTA-TACACAGGTATTGTAAATActattgcgtattgtatattattgt----attttattgtctatgtaatatatGCGATA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60672944 212 + 64156825 ttcgtgttagacatttgcccgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAATTGTATTAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTTGT----ATTTTATTGTATATGTAATACATGCAGTA i rheMac3.chr19 I 599 C 0 s macFas5.chr19 55814618 212 + 59248254 ttcgtgttagacatttgcctgttgacttcctcagtggatgtgaggaATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGGCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTACGCAattgtattagacaagtattgtaaatactattgcatattgtatattgttgt----attttattgtatatgtaATACATGCAGTA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47921828 210 + 51301725 TTCATGTTAGACA-TTGCCCGTTGACTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCT-CCAATATGAAATAATATCCAA---GGGCATTCCAATAGTATGCAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGtatattgttgt----attttattgCATATGTAATACATGCAGTA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625020 202 + 50890351 TTCGTGTTAGACATTTGCCCGTTGATTTCCTCAGTGGATGTGAGGAATGGGACCTCAGATATTGCTGTCCCTTCGTTTCCTCCCTTCGGTCTCCCAATATGAAACAATATCCAA---GGGCATTCCAATAGTACACAATTGTA-TAGACAAGTATTGTAAATACTATTGCATATTGTATATTGTCAT--------------ATATGTAATATATGCAGTA i chlSab2.chr6 I 615 C 0 s calJac3.chr22_GL285922_random 42759 214 + 138250 TTAGAGTCAGGCA-CTGCACACTGCCGTCCTCAGTGGGTGTGAGGAGTGTGACCTCAGACATTGCCGTCCCTTCATCTCCTCCCTCC-GTCTCCCAGTATTAAACAGTATCCAGCACGTGCA---CAATGAGACGCGTTTGTG-TAGACAGTTATTGTGAATAGTATTGCATGTCGTATATCATGGTCTTTCTTTTATTGTACATGCAGTACATGCAGTA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59944669 773 + 63644993 M a score=76116.000000 s hg38.chr19_GL949753v2_alt 745922 27 + 796479 AAACCCCACACTAATGGGATGCATTGG s panTro4.chr19 59945453 27 + 63644993 AAACCCCACACTAATGGGATGCATTGG i panTro4.chr19 M 773 C 0 s ponAbe2.chr19 56891311 26 + 60714840 -AAACCCACACTAATGGGATGCATTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103370989 27 - 106955855 AAACCCCACACTAATGGGACGCACTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673156 27 + 64156825 AAACCCCACACTAATGGGATGCGCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55814830 27 + 59248254 AAACCCCACACTAATGGGATGCGTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922038 27 + 51301725 AAACCCCACACTAATGGGATGCATTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625222 27 + 50890351 AAACCCCACACTAATGGGATGCATTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 42973 27 + 138250 GAACCCCACACTggccaggtgcggtgg i calJac3.chr22_GL285922_random C 0 I 1464 e canFam3.chr1 20089264 2803 - 122678785 I a score=591042.000000 s hg38.chr19_GL949753v2_alt 745949 258 + 796479 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGCTTGAATCAGTATTCCATGATTACATGATAGGATataatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat s panTro4.chr19 59945480 258 + 63644993 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGCGTGTAAGTCAGGACGTCTCAGCATGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCagtattccatgattacatgataggatgtaatatatataata----atcgtttcaaatagcctgaaggaggatggggaaagttcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgattactatatgtatatacacat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891337 264 + 60714840 GCTCCAAGGATGGAGCAGGATGGAGCCTCAGTGTGTAAGTCAGGACGTCTCAGCGTGTGCTGGCCATGGGTTTCCCGGTATTTACAACATTTGGTTGAATCAATATTCCATGattacatgataggatgtaatatatataataatatatcatttcaaatagtctgaaggaggatggtgaaagtttccaacacaaagaaaagatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371016 258 - 106955855 GCTCCGAGGATGGAGCAGGATGGCGCCTCAGTGTGTAAGTCAGGGCGTCTCAGCACGTGCTGGCCATGGGTTTCCCGGTATTTACAGCATTTGGTTGGATCAATATTCCAtgattacataatagaatgtaatatatataata----acagtttcgaatagcctgaaggaggatggtgaaaattcccaacac--agaaaggatgcatgtttgagaagatgggtgtgctacttaccctgatctgatcactatatgtatatacacat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60673183 264 + 64156825 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCATgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtatacat i rheMac3.chr19 C 0 I 681 s macFas5.chr19 55814857 263 + 59248254 GCTCCAGGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTACAACGTTTGGTTGAATCGATATTCCGTgattacatggtaggatgtaatatatatgataatatatcgtttcaagtagcctgaaggaggatggtgaaggttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctgatcgctatatgtatgtataca- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922065 264 + 51301725 ACTGCAAGGATGGAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTCACAGTATTTGCAACGTTTGGTTGAATCAATATTCCGTGATTACATGGTAGGATGTAATACATATGATAATATATCGTTTCAAGTAGCCTTAAGGAGGATGGTGAAAGTTCCCAACACAGAGAAAGGATGCATGTTTGAGAACATGGGTGTGCTgcttaccctgatctgatcactgtatgtatatacacat i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625249 264 + 50890351 GCTCCAGGGATGCAGCAGGATGGAGCCCCAGTGTGTAAGTCAGGTCATCTCAGCGTGTACTGGCCATGGGTTTTGCAGTATTTGCAACGTTTGGTTGAATCaatattctgtgattacatggtaggatgtaatacatatgatagtatatcgtttcaagtagccttaaggaggatggtgaaagttcccaacacagagaaaggatgcatgtttgagaacatgggtgtgctgcttaccctgatctaatcactgtatgtatatacacat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=60907.000000 s hg38.chr19_GL949753v2_alt 746207 58 + 796479 atagtgcatatatgtaaacctacatctatacatacatgtgtatgtaCATATACACGTG s panTro4.chr19 59945738 58 + 63644993 atAGTGCAtatatgtaaacctacatctatacatacatgtgtatgtgcatatacatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891601 58 + 60714840 atagtgcatatatgtaaacatacatctatacgtacatgtatatgtgcatatacatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371274 54 - 106955855 atagtgcatatatgtaaacatacatcta----tacatgtatgtgtgcatATACCTGTG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815120 14 + 59248254 --------------------------tgtgtgtatatgca------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922329 58 + 51301725 atagtgcatatatgtaaacatacatctgtgcgtacatgtatatgtgcatatacatatg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625513 58 + 50890351 atagtgcatatatgtaaacatacatctgtgcatacatgtatatgtgcatatacatatg i chlSab2.chr6 C 0 I 54 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=29762.000000 s hg38.chr19_GL949753v2_alt 746265 58 + 796479 tgtacatacacacgtgtat----atgtatgtatatgtatatatgtatgcatgtgtgtgtgtg s panTro4.chr19 59945796 54 + 63644993 tgtacatacacatgtgtat----atgtatgtatacgtat----gtatgcatgtgtgtgtgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891659 62 + 60714840 tGtacatacatatacatataggcatatatgtatacatatgtgtatatgcatgtgtgtgtata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371328 58 - 106955855 TGTACatacatatacatac----atgtgtatgtatacatgtgtatatgcatGTGTGTGTATG i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47922387 56 + 51301725 --tggacatatgtgtgtgc----acatatgtatacgcacacatatatgtatatgtgtgtata i papAnu2.chr19 C 0 I 4 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e chlSab2.chr6 47625571 54 + 50890351 I e macFas5.chr19 55815134 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249796.000000 s hg38.chr19_GL949753v2_alt 746323 158 + 796479 t----------gtgtgtgtgtgtgtatacatatgtatacaaatacatgtacatAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggcacggtggctcatgcctataatcccagcactttgggagg s panTro4.chr19 59945850 144 + 63644993 t------------------------atacatatgtataCAAATACATGTACATAAGCGATCCCCTCCTGgaattgcttgagcccaggaggtcaagtctgctgtgaggtaagattgcaccactggccgggtgcagtggctcatgcctataatcccagcactttgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56891721 144 + 60714840 t------------------------atatatatgtatacaaatacacgtatataAGCGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgctgtgaggtaagactgcaccacCagccaggcgcggtggctcatgcctataatcccagcactttgggagg i ponAbe2.chr19 C 0 I 2941 s nomLeu3.chr10 103371386 168 - 106955855 tatatatatatatatatatatatatatatatatGGATACAAATACATGTATATAAGCGATCCCCTCCTGggattgcttgaccccgggaggtcaagactgctgtgaggtaagattgcaccactggccgggcgcagtggctcatgcccataatcccagcactttgggagg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815134 144 + 59248254 ------------------------tgtatatatgcatataaatacatatatataagtgaTCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcgcggtggctcacgcctataatcccagcactttgggagg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922447 158 + 51301725 ----------tgtgtatatgcatgtgtatgtatgtatataaatacatgtatataagtGATCCCCTCctgggattgcttgagcccaggaggtcaaggctgccgtgagataagattgcaccactggccgggcgcggtggctcatgcctataatcccagcactttgggagg i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47625625 158 + 50890351 ----------tgtgtatatgcatgtatatatgtgtatataaacacatgtatataAGTGATCCCCTCCTGggattgcttgagcccaggaggtcaaggctgccgtgaggtaagattgcaccactggccaggcacggtggctcatgcctataatcccagcactttgggagg i chlSab2.chr6 I 54 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=411980.000000 s hg38.chr19_GL949753v2_alt 746481 235 + 796479 ccagggtgggcggatcacaaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaataccagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcacttgaacccgggaggcggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc s panTro4.chr19 59945994 235 + 63644993 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaagaaattagctgggcatggtggcacgtgcctgtaatcctagctactggggaggctgagtcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894806 235 + 60714840 ccagggtgggcggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcgggaggctgagtcaggagaatcacttgaacccgggaggcagaggttgcagtgagccaagatcacgccactacactccagcctgggcaacagagcaagactccatctt i ponAbe2.chr19 I 2941 C 0 s nomLeu3.chr10 103371554 234 - 106955855 ccagggtgggtggatca-aaggtcaggagttcaagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaaccctgcaggtggaggttgcagtgagccgagatcgtaccactgcattccagccttggtgacagagcgagattccatctt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55815278 235 + 59248254 ccaaggtgggcagatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctgtactaaaaatataaaaaattagctgggcatggtggcacgtacctataatcccagctacttgggaggctgagtcacgagaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccactgcattccagcctgggcaacacagcaagactccatctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922605 234 + 51301725 ccaaggtgggtggatcacaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatagtggcacatgcctataatcccagctacttgggaggctgagtcaggagaattacttgaacccgggaggtggaggttgcagcgagctgagatcgtaccactgcattccagcctgggcaacac-gcaagactccatctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47625783 235 + 50890351 tcaaggtgggcagatcagaaggtcaggagttcgagaccagcctggtcaacatggtgaaacaccatctctactaaaaatataaaaaattagctgggcatggtggcacgtgcctgtaatcccagctacttgggaggctgagtcaggagaattacttgaacccaggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctgggagacacagcaagactccatctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e rheMac3.chr19 60673447 681 + 64156825 I a score=143443.000000 s hg38.chr19_GL949753v2_alt 746716 141 + 796479 gagg--aaaaaaaaaaa--tgatattgccccattgcactccagact-gacaacagagcaagaccctgtctcagaaaacgaagaggaggaggaaaaaaaaaGTACTAAttatctgaaattccaatttaaccaggcatccagtgtttt s panTro4.chr19 59946229 134 + 63644993 gagg--gaaaaaaaa----tgatattgccccattgcactccacact-gacaacagagcaagaccctgtctcagaaaaagaagaagag-----aaaaaaaaGTACTAAttatctgaaattccagtttaaccaggcatccagtgtttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895041 140 + 60714840 gagg--aaaaaaaaaaaaTTgatattgcaccattgcactccagact-ggcaac-gagcaagaccctgtctcagaaaaagaagaagaggag--aaaaaaaagtactaattatctgaaattccaatttaaccaggcatccagtgtttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55815513 141 + 59248254 -gag--aaaaaaaaaat--tgagattgcaccactgcactcaagactgggcaacagagcaagaccctgtctcagtaaaataagaagaagagaaaaaaaaaGGTACTAAttatctgaaattcaaatttaaccaggcatccagtgtttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47922839 135 + 51301725 -aag--aaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagac------aaaaaaaaaggtactaattatctgaaattcaaatttaaccaaGCATCCAGTGTTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626018 142 + 50890351 -aagaaaaaaaaaaaat--tgagattgcaccactgcactcaggactgggcaacagagcaagaccctgtctcagtaaaataagaagagga-gaaaaaaaaaGTACTAAttatctgaaattcaaatttaaccaagcatccggtgtttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=536423.000000 s hg38.chr19_GL949753v2_alt 746857 684 + 796479 atctggtaaccctCATTCTTacacacacac-------acacacacacacac------acacaAaggcgggatagttgtcattcccactgtaaacataaggaaactgggcagaggccaagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagctcatgtcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCATAGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACGCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgccttctgtgcatggactccaagtcgccataatcgtacgggttacccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctacagctggcagga-gtagattcaaaccctagcagCACCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcacagtggtggttacc-ggggcggtggggtaaggtttggggagatgttggtcagaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta s panTro4.chr19 59946363 691 + 63644993 atctggtaaccctCATTCTTacacacacaccacacacacacacacacacac------acacaAaggtgggatagttgtcattcccactataaacataaggcaactgggcagaggccgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCGCCCCCGTAGCCGCCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCACCCTCCTGCCGCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACGCTGTACCATGGCTGGGAGTCTTccaggcgccgtgctgagcgcctgctgtgcatggactccaagtcgccataatcgtacgggttagccaccattatcagtcccctcttatacatcaggctagtgagacagtatcttatccacagtcctgcagctggcagga-gtagattcaaaccctagcagCGCCAATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggag-agagagcacagtggtggttaccaggggtggtgggttaaggtttggggagatgttggtcaaaggagg-acagtttcagttggacaagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895181 685 + 60714840 atctggtaaccctCATTCTTacacacacgc-------acacgcacacacac------acacaAaggtgggatagttgtcattcccactgtaaacataaggaaactgggcagaggatgagcaaccttgtgtagctcacatagcaagaagtgggtgaacccagatcatctcttgactctgagctcagAGAGTGACAACTTGTCACCAGCTCCCCCGTGGCCACCACCCTTTGTCCACCCCAGGCTCCCTCTGCACCCCAACCTAAGCTCCGTGCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCCCCTCAGCCTCTTTGTAGGTTTCCATGCGATGCTGTACCATGGCTGGGAatcttccaggcgccgtgctgagcgccttctgtgcatggactccaagtcaccataatcgtacgggttagctaccattatcagtcccctcttatacatcaggctagtcagacagtatcttatccacagtcctacagctggcagga-gtagatgcaaaccctagcagCACCGATTAGTGGTAAAGAGTGTGGACTTGGgaacttacaggagtagagagcgctgtggtggttaccaggggtggtggggtaaggtttgaggagatgttggtcaaaggagg--cagtttcagttggataagaggagtatgtcttggagatctactgcacatcatggtgactgtagtta i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47922974 672 + 51301725 ATCTGGTAACCCTcattcttacacacacac-------acacacacacacacacacacacacagaggcggGATAGTTGTCATTCCCACTGCAAAC--AAGGAAACTAGGCAGAGGCTGAGCAACCTTCCGTAGCTCACATAGCAAGAAGTGGGTGAACCCAGATCATCTCTTGACTCTGAGCTCAGAGAATGACAACTGGTCACCAGCTCCCCAGTGGCCACCACCCATTGTCGACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTgtccccctcctcctgccccatcacagcccacctcagcctctttgtA---------GCAACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGGGCCGAGCGCCTCCTGTGCGTGGACTCCAAGTCGCCGTAATCGCACGGGTTAGCTAACGTTATCAGTCCCCTCTTACACATCAGGCTAGTGAGACAGAATCTTATCCACAGTCCTACACCTGGCAGGAGGGGAGTTCAAACCCTAGCAGCACCGTTTAGTGGTAAAGAGTGTGGACCTGGGAATTTACAGGAGCAGA---------GGTGGTTACC-GGGGTGGTGGGGTAAGgtttggggagatgttggtcgaAGGAGACACAGTTTTAGTTGGACAGGAGGAGTGTATCTTGGAGATCTATTGCACATcgtggtgactgtagtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626160 651 + 50890351 atctagtaaccctCATTCTTacacacacac-------acacacacacacac------------aggcaggatagttgtcattcccactgcaaac--aaggaaactgggcagaggctgaacaaccttctgtagctcacatagcaagaagtgggtgaacccagat-gtctcttgactctgagctcagAGAGTGACAACTGGTCACCAGCTCCCCAGTGGCCACCAGCCTTTGTCAACCACAGGCTCCCTCTGCACCCCAACCCAAGCTCCG-GCCGCTTCTCTGTCCCCCTCCTCCTGCCCCATCACAGCCCACCTCAGCCTCTTTGTAGGTTTCCATGCGACCCTGTACCATGGCTGGGAACCTTCCAGGTGCCGTGCTGAGCGCCTCCTGTGTGTGGACTCCAGGTCGCCGTAATCGTACGGGTTAGCTACCGTTATCAGCCCCCTCTTACACATC-----------------TCTTATCCACAGTCCTACACCTGGCAGGAGGTGGGTTCAAACCCTAGCAGCACCGTTTAGTGGTGGAGAGTGTGGACTTGGgaatttacaggagcaga---------ggtggttacc-ggggtggtggggtaaggtttggggagatgttggtcaaaggagacacagtttcagttggacaggaggagtgtgtcttggagatctattgcacgtcgtggtgactgtagtta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e macFas5.chr19 55815654 0 + 59248254 C e rheMac3.chr19 60673447 681 + 64156825 I a score=244771.000000 s hg38.chr19_GL949753v2_alt 747541 200 + 796479 ataacaacatattgtacacttgcatatcaccgatagtagattttaaatgttctcaccggccgggcgcgctggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagagcagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcggggcgta s panTro4.chr19 59947054 200 + 63644993 ataacaacatattgtacacttgcatatcactgatagtagattttaaatgttctcaccggctgggcgcggtggctcacacctgtaatcc---cattttgggaggccaaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctgctaaaaatacaaaaattagcggggcgta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56895866 200 + 60714840 ataacaacatattgtacacttgcatatcactgagagtagattttaaatgttctcaccggccgggcgcggtggctcacgcctgtaatcc---cattttgggaggccgaggtgggcggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagtggggcgtA i ponAbe2.chr19 C 0 M 221 s macFas5.chr19 55815654 201 + 59248254 atAACAACATATTGCACACTCGCATATCACTGAGAGTAGGTTTTAAA-GTTCTCACTggccaggcgcagtggctcacacctgtaatcccagcattttgggaagccaaggcgggtggctcacctgaagtcaggagttcaagaccagcctgaccaacatgg-gaaaccctgtctctagtaaaagtacaaaaataagctgggcgta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923646 202 + 51301725 ataacaacATATTGCACACTCGCATATcactgagagtagattttaaa-gttctcactggccaggcgcggtggctcacacctgtaatctcagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctactaaaagtacaaaaataagatgggcgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47626811 202 + 50890351 ataacaacatattgcacactcgcatatcactgagagtagattttaaa-gttctcacTggccgggcgcggtggctcatgcctgtaatcccagcattttgggaagccaaggcgggtggatcacctgaagtcaggagttcaagaccagcctgaccaacatggtgaacccctgtctctactaaaagtacaaaaataagctgggcgta i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=13116.000000 s hg38.chr19_GL949753v2_alt 747741 14 + 796479 gtggcaggagcctg s panTro4.chr19 59947254 14 + 63644993 gtggcaggagcctg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55815855 14 + 59248254 gtggtaggagcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923848 14 + 51301725 gtggcaggagcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627013 14 + 50890351 gtggcaggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C e rheMac3.chr19 60673447 681 + 64156825 I a score=249195.000000 s hg38.chr19_GL949753v2_alt 747755 203 + 796479 taatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccaacgtcatgccactgcgctccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaaataaaTGAGcgtggaatactactcagccattaaaaggagtgaaataatgtcttttggcca s panTro4.chr19 59947268 203 + 63644993 taatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaatgtcatgccactgcactccagtctgggcaacagagtgagactccatgtcaaaaaataaaaataaataaaagtaaaTGAGcgtggaatgctactcagccattaaaaggagtgaaataatgtcttttggcca i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60674128 197 + 64156825 taatcccagctacccaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i rheMac3.chr19 I 681 C 0 s macFas5.chr19 55815869 197 + 59248254 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcggtgagctgacatcacaccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacagaataatgtcctttggcca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47923862 197 + 51301725 taatcccagctactcaggaggcagaggcaggagaatcacttgaacctgggagatggaggttgcagtgagttgacatcatgccactgcactccagcctgggcgacagagtgagactctgtgtca------aaaaatcagtaaaaataaatgagtgtgaaatactactcagccattaaaaggaacaaaataatgtcctttggcca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627027 197 + 50890351 taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagctgacatcatgccactgcactccagcctgggcgacagagtgagactccatgtca------aaaaataagtaaaaataaaTGAGTGtggaatactactcagccattaaaaggaacaaaataatgtcctttggcca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56896066 221 + 60714840 M e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=461889.000000 s hg38.chr19_GL949753v2_alt 747958 276 + 796479 ggcacagtggctcacatctgtaatgccagcactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccatcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt s panTro4.chr19 59947471 276 + 63644993 ggcacagtggctcacatctgtaatgccaatactctgggaggccgaggtgggtggatcacgaggtcaagagatcaagaccgtcctgcccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttaaacccgggaggtggagtttgcagtaagccgagatcacaccactgcactccagccttggtgagagagcgagattccgtcttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56896287 276 + 60714840 ggcacagtggctcacatctgtaatgccagcagtctgggaggtcgaggcaggtggatcacgaggtcaagagatcaagaccatcctccccaacacggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggtggagtttgcggtgagccgagatcacaccactgcactccagcctcggtgagagagcgagattccgtctta i ponAbe2.chr19 M 221 C 0 s rheMac3.chr19 60674325 271 + 64156825 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816066 271 + 59248254 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctggctaacacggtgaaa-cccgtctctactaaaaatacaaaaattagccgggcgtggtgac-ggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagctgagatcacgctgctgtactccagtctcggc--aacagcgagattccagctc- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924059 273 + 51301725 ggcacagtggctcacgcctgtaatgccagcactctgggaggccgaggcgggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccaagatcacgctgctgTACTCCAGTCTCAGC--AAcagccagattccatctc- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627224 273 + 50890351 ggcacagtggctcacacctgtaatgccagcactctgggaggccgaggccggtggatcatgaggtcaagagatcaagaccatcctcctcaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagccgagatcatgctgctgtactccagcctcggc--aacagccagattccgtctc- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I e nomLeu3.chr10 103371788 0 - 106955855 C a score=16509.000000 s hg38.chr19_GL949753v2_alt 748234 14 + 796479 aaaaaaaaaaaaaa s panTro4.chr19 59947747 14 + 63644993 aaaaaaaaaaaaaa i panTro4.chr19 C 0 I 185 s ponAbe2.chr19 56896563 8 + 60714840 aaaaaaaa------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371788 14 - 106955855 aaaaaaaaaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674596 11 + 64156825 aaaaaaaaaaa--- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816337 10 + 59248254 -aaaaaaaaaa--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924332 11 + 51301725 aaaaaaaaaaa--- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627497 11 + 50890351 aaaaaaaaaaa--- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=1447791.000000 s hg38.chr19_GL949753v2_alt 748248 632 + 796479 aaagtcttttgcagcaacttggatggagctggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggcagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaa----GCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagttcaagaccagcctgggcaacatagcg-gacccccgtaact-aaaaaaattacaaaaacaagccaggcatgatggtgtacaactgtagttccagatactcaggaggctgatggggaggcactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctcctgcctgggtgacagaagtgaggccctatctcaaataaaattaaataaataa s panTro4.chr19 59947946 632 + 63644993 aaagtcttttgcatttacttggatggaactggaaggcattattctaagtaaagtaatacaggagtggaaaacaaaaatctgtatattctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcagagactcagaagggaagggcagaagtggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaacaaTTAAGCCAGATGCAGTAACCTGTACAGGCcacacctgtaaccccaacactttgggaggccgaggtgggtggatcgcttgagcccaggagtttgagaccagcctgggcaacatagcgagacccccataact-aaaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaggcattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgccctccagcctgggtgacagaagtgaggccctatctc-----aaattaaataaataa i panTro4.chr19 I 185 C 0 s ponAbe2.chr19 56896571 638 + 60714840 aaagtcttttgcagcaacttggatggaggtggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttataagtgagagctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatggacttcggagactcagaagggaagggcagaaggcgggtagggatgaaaaactacacattaggtacaaggtacagtagtcaggtgacaggtgcactaaaatctcagaattcaccagaatagaattcatccatgtaaccaagaaccacttgtatcccaaaagctactgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcacacctgtaaccccagcactttgggaggctgaggtgggtggatcgcttgagcccaggagttcgagaccagcctgggcaacatagtgagacccccgtaactaaaaaaaatcacaaaaatcagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggagggattgattgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggccacagaagtgaggccctgtctcaaataaaattaaacaaataa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103371802 631 - 106955855 aaagtcttttgcagcaacttggatggagctggaaggcattattct-----aagtaacacaggagtggaaaacaaaaatctgtattttctcacttataagtgagacctaagctgtgggtatgcaaaggc----atgcagagtgatgtaatcgacttcagacactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactagtcaggtgacaggtgcactaaaatctcagaattcaccagaatataatccatccacataaccaagaaccacttgtatcccaaaagctgttgaagcaaaCATTAAGCCAGATGCAGTAACCTGTAGAGGtcacacctgtaaccccaacactttgggaggctgaggtgggtggattgcttgagcccaggagttcgagaccagcctgggcaacatagcgaga-ccccgtaact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctattcaggaggctgatggggaaggactggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgtactccagcctgggtgacagaagtgaagccctgtctcaaataaaattaaataaataa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60674607 630 + 64156825 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggatcggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaa--gaggccctgtctcaagtaaaattaaataaataa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816347 632 + 59248254 at-gtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacagggtgatgtaatggacttcagagactcagaagagaagggcagaaggtgggtagggatgaaaaactacacattaggtacaaggtatactactcaggtgacaggggcactaaaatctcagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGATGCAGTAACCTGTACAGGtcaaacctgtaaccccaacactttgggaggccgaggtaggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtagttccagctactcaggaggctgatggggaaggattggttgagcctgggaggttgaggctagagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccttgtctcaagtaaaattaaataaataa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924343 622 + 51301725 acagtc--ttgcagcaacttggatgtagctgg-aggcattattctaagtaaagtaacacaggagtggaaaacaaaaatc--tatgttctcacttacaagtgagagctaagctgtgggtatgcaaaggc----atacggGGTGATGTAATGGACTTCAGAGACTCAGAAGGGAAAGGCAGAAGGGGGGTAGGGATGAAAaactacacattaggtacaaGGTATACTACTCAGGTGACAGgggcactaaaatctcagaattcaccactatatagTTCATCCATGTAATCAATAACCACTTGTATCCCAAAAGCAATTGAAGCAAAAATTAAGCCAGAGGCAGTAACCTGTACaggtcacacctgtaaccccaatgctttgggaggccgaggtgggtggatcgcttgaacccaagagttcgagaccagcctgggcagcatagcaaga-ccccataact-acaaaaattacaaaaatgagccaggcatgatggtgtgcaactgtggttccagctactcaggaggctcatggggaaggattggttgagcctgggaggttgaggctgcagtgagccatgatcatgccactgcactccagcctgggtgacagaagtgaggccctgtctcaagtaaaatt---------a i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47627508 634 + 50890351 aaagtc--ttgcagcaacttggatgtagctggaaggcattattctaagtaaagtaacacaggagtggaaaacaaaaatctgtatgttctc----acaagtgagagctaagctgtgggtgtgcgaaggcgtatatacagggtgatgtaatggacttcagagactcagaagggaagggcagaaggggggtagggatgaaaaactacacattaggtacaaggtacactactcaggtgtcaggtgcactaaaatcccagaattcaccactatatagttcatccatgtaaccaacaaccacttgtatcccaaaagcaattgaagcaaaaaTTAAGCCAGAGGCAGTAACCTGTACAGGtcacacctgtaaccccaacactttgggaggccgaggtgggtggatggcttgaacccaacagttcgagaccagcctgggcagcatagcgaga-ccccataact-acaacaattacaaaaatgagccaggcgtgatggtgtgcaactctagttccagctactcaggagactgatggggaaggattggttgagcctgggaggtggaggctgcagtgagccatggtcatgtcactgcactccagcctgggtgacagaagtgaggccctgtctcgagtaaaattaaataaataa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 43000 1464 + 138250 I a score=715218.000000 s hg38.chr19_GL949753v2_alt 748880 273 + 796479 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgga--acctgaagtaaggagcttgagaccagcctggccaacatggtgaaaccccgcccctactaaaaatacaataatt-agccagacctggtggcagatgcctgtaatcccaactattcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcattccagcctgagcgac s panTro4.chr19 59948578 273 + 63644993 aaGTTAAAAC-Aggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtgga--acctgaagtaaggagctcgagaccagcctggccaacatggtgaaacgccgcccctactaaaaatacaataatt-agccagacctggtggcagatggctgtaatcccaactactcgggaggctgaggcaggagaatcacttggacccgggaggcagagtttgcagtgagctgagatcatgccattgcactccagcctgagcgac i panTro4.chr19 C 0 M 571 s ponAbe2.chr19 56897209 275 + 60714840 aaGTTAAAAC-Aggccggacacagtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatt-agccagacctggtggcggatgcctgtaatcccagctactcgcgaggctgaggcagaagaatcacttggacccgggaggcggagtttgcagagagctgagatcatgccattacactccagcctgagcgac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372433 275 - 106955855 aGGTTAAAAC-Aggccgggcgcggtgcctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaagtcaggagttcgagaccagcctggccaacatggtgagaccccgtctttactaaaaatacaaaaatt-agccagacctggtggcagatgcctgtaatcccagctactcgggagtctgaggcaggagaatcacttggacccgggaggcggagtttgcagtgagctgagatcacaccactgcactccagcctgtgtgcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675237 275 + 64156825 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55816979 275 + 59248254 aaGTTAAAAC-Aggccggatgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcgggtagatcacctgaagtcaggagttcaagtccagcctggtcaacatggtgaaaccccgtctctactaaaaatataaaaatt-agccggacctggcggtggatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggcagagtttgcagtgagccaagatcgtgccactgcactccagcctgagcaac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47924965 276 + 51301725 aagttaaaac-aggctggacgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcaggtggatcacctgaagtcaggagttcaagtccagcctggccaacatgttgaaaccctgtctctactaaaaatataaaaattaagcgGGAcctggtggtagatgcctgtaatcccagctacttcggaggctgaagcaggagaatcacttggacccaggaggctgagtttgcagtgagccaagatcgtgccactgcactccagcctgagcgac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628142 275 + 50890351 aaGTTAAAAC-Aggccggacgcggtagctcacgcctgtaaccccagcactttgggaggccgaggcggggggatcacctgaagtcaggagttcaagtccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaatt-agccggacctggtggtagatgcctgtaatcccagctacttcagaggctgaagcaggagaatcacttggacctgggaggcggagtttgcagtgagctgagatcgtgccactgcactccagcttgagcgac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44464 227 + 138250 aagcaaaaaCGAAGCCAGACACTGTGGCTCACACCTGTAACccc----------------------------------------aggagttcaagaccagcctgggcaacatagcgagatcctgt---------aactacgaaaatt-agccaggcgtgatggtatgcagctggagttccagctactcaggagatagagggggagggattgcttgagcctgggaggtggaggttgcagtgagccatgatcgtgccactgcactccagcctgggtgac i calJac3.chr22_GL285922_random I 1464 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=415583.000000 s hg38.chr19_GL949753v2_alt 749153 213 + 796479 cgactgagcgagactccatctc------aa---aaaacaaacaaaaa-----gaaaaaaagaaTACATCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATGCAACCATCTTCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA s ponAbe2.chr19 56897484 206 + 60714840 cgactgagcgagactccatctc------aa---aaaacaaacaaaca------------agaaTACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAATACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTATCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372708 216 - 106955855 cgactgagcgagactccatctc------aa---aaaaaaaaaaaaaaaacaaaaaaaaCAGAACACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCTTCTCATCTCCAGT--TACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATT---CTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675512 220 + 64156825 caacagagcgagactccatctcaaaaaaaa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817254 214 + 59248254 caacagagcgagactccatctc------aa---aaaaaaaaaaaaaaGTT-------AAAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925241 204 + 51301725 caacagagcgagactccgtcta---cacaa---aaaaaaaaaaaaaatttt-aaaacaaagaatacaCCCATGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACTCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCTTTTAGTGGTCAAATTCTCCTGAAGAAATCAGGAAAT------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628417 213 + 50890351 caacagagcgagactccatctc-------a---aaaaaaaaaaaaaaGTT-------AGAGAATACATCCGTGGATGGATAATGAATGAGAGGTTGTTTATATTCACAGTTAACCCTCTCATCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTTTTGGAGATGCTGTCCCTTTAGTGGTCAGATTCTCCTGAAGAAATCAGGAAATAATGCATTCGACATGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 44691 205 + 138250 ---aaaagtgagaccctgtctc------aaaTCAAATTACATAAAAATTA-------AAATACTACGTCCATGTATGAAT----GATGAGAGGTTGTTTATTGTCACAGTTTACCC-----TCTCCAGTAACACAACCATCTCCTTCCTGCTTAGCCTCTTGGAGACGCTGTCCCGCTAGTGGTCAAATTCTCCTGAAGAAATAAGGCAATAATGCATTCGACGTGCCta i calJac3.chr22_GL285922_random C 0 I 120 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=6620.000000 s hg38.chr19_GL949753v2_alt 749366 5 + 796479 GCACA s ponAbe2.chr19 56897690 5 + 60714840 GCGCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372924 5 - 106955855 GCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675732 5 + 64156825 GCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817468 5 + 59248254 GCACA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47628630 5 + 50890351 GCACA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e calJac3.chr22_GL285922_random 44896 120 + 138250 I e papAnu2.chr19 47925445 0 + 51301725 C e panTro4.chr19 59948851 571 + 63644993 M a score=190398.000000 s hg38.chr19_GL949753v2_alt 749371 91 + 796479 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGAC---TATTTACTCCACTACTGTAGGGGATACTGACAAATT s ponAbe2.chr19 56897695 94 + 60714840 AGTGAAGATCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCCATCAGGAGACTCTTATTTACTCCACTACTGTAGGGGATACTCACAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103372929 94 - 106955855 AGTGAAGATCAGGCAGCAGAAATGTATTCGACCTGCCACCCATCCGTCAGGAGACTCTTATTTACTCCACTACTGTAAGGGATACTGACAAATT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675737 94 + 64156825 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817473 94 + 59248254 AGTGAAGAGCAGGCAGTGGAAATGCATTCGACCTGCCACCCATCGGTCAGCAGACTCTTACTTACTCCACTGCTGTAGGGGATACTGACAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925445 74 + 51301725 --------------------AATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTATTTACTCCACTGCTGTAGGGGATACTGACAAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628635 93 + 50890351 AGTGAAGAGCAGGCAGCAGAAATGCATTCGACCTGCCACCCATCGGTCAGGAGACTCTTA-TTACTCCACTGCTGTAGGGGATACTGACAAATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45016 90 + 138250 AGTGAGGAATAGGCAGCAGAAATGCATTTGACCCATCACCCATCCTTCAAGAGACTC----TTACTCCACTACTATAGGTGATACTGACAAATT i calJac3.chr22_GL285922_random I 120 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e panTro4.chr19 59948851 571 + 63644993 M a score=813299.000000 s hg38.chr19_GL949753v2_alt 749462 294 + 796479 AAATCCAT-ACCTAGTCCAGATATCA---ATTCCACAAtttttttttttttt-----------tttttgagacggagtttcgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccacctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacacccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccgacctcagatggcccacccgcctcggcctcc s panTro4.chr19 59949422 292 + 63644993 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt----------------gagacggagttttgctcttgttgcccaggccagagtgcaatggtgtgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgccttagcctccagagtagctgggattacaggcatgtgccaccacgcccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcccaacctcagatggcccacccgcctcggcctcc i panTro4.chr19 M 571 C 0 s ponAbe2.chr19 56897789 306 + 60714840 AAATCCAT-ATCTAGTCCAGATATCATCAATTCCACAAttttttttttttttttttttttttttttttgagacggaatttcgctcttattgcccaggccggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcccgggttgaagcgatcctcctgcctgagcctccaaagtagctgggattacaggcctgtgccaccatgcccaactaattttgtatttttagtagagatggggtttctccatg-tggtcaggctgg-ctccaactcccgacctcaggtgacccacttgccttggcctcc i ponAbe2.chr19 C 0 T 4579 s nomLeu3.chr10 103373023 295 - 106955855 AAATCCAT-ACCTAGTCCAGATATCATCAATTCCACAAtttttttttttttt-------------tttgagacagagttttgctcttgttgcccaggccagaatgcaatggtgtgatcttggctcaccacaacctctgccttctgggttcaagtgattctcctgcctcagcctccagagtagctgggattacaggcatgtaccaccacacccggctaattttgtatttgtagtagagatggggtttctccatgttggtcaggctagtctcaaactcccgacctcaggtgacccacccgcctcagcctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60675831 304 + 64156825 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAATTtttgtttgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccgtgttggtcaggctggtctccagctcccaacctcaggtgatccgtccgcctcggtctcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55817567 304 + 59248254 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgtctgtttg-----tttgtttttttgagatggagttttgctcttgttgcccaggccggagtgtaatggcgtgatctcggctcactgcaacctccgcctcccagattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcatgtgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47925519 303 + 51301725 AAATCCATAACCTAGTCCAGATATCATGAagtccactaatttt-tttttttt-----tttttttttttgaaacggagttttgctcttgttgcccaggccggagcgtaatggtgtgatctcggctcaccgcaacctccgcctcccggattcaagcaattctcctgcctcagcctccagagtagctgggattacaggcatgcaccaccacgcccagataattttgtatttgcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcagatgatccatccgcctcggtctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47628728 304 + 50890351 AAATCCATAACCTAGTCCAGATATCATCAAGTCCACAAtttttgttcgtttg-----tttgtttttttgagacggagttttgctcttgttgcccaggctggagtgtaatggtgtgatctcggctcaccgcaacctccccctcccggattcaagcgattctcctgcctcagcctccagagtagctgggattacaggcgtgcgccaccacgcccagataattttgtattttcagtagagatggggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatccgtccgcctcggtctcc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45106 299 + 138250 CAGCCCATAACCTTGTCCTGATATCA---AGTCCACAttttttttttttttt-------tttttttttgagaccgagtttcgctcttgttgcccaggctggagtgcaatggcgcattctcagctccccacaacctccgcctcctggtttcaagtgattctcctgcctcagcctccagagtagctaggattacaggtatgtaccggcatgtctggctaactttgtatttctagtagaaacagggtttctccatgttggtcaggctggtcttgaactcccaagctcaggtaatccacccacctcaccctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=44023.000000 s hg38.chr19_GL949753v2_alt 749756 41 + 796479 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt s panTro4.chr19 59949714 41 + 63644993 caaagtgT-------------GTAAGCCATGGCACTCAGCCttttttttttttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103373318 39 - 106955855 caaagtgc-------------ATGAGCCATGGCACTCAGCtttttttttttt-- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676135 27 + 64156825 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55817871 27 + 59248254 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47925822 27 + 51301725 caaagtgc-------------gtgagccacggcactcagc-------------- i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47629032 27 + 50890351 caaagtgc-------------GTGAGCCACGGCACTCAGC-------------- i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 45405 50 + 138250 caaagtgctgggattacgggtgacagccaccacgcccggccAtttttttt---- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I e ponAbe2.chr19 56898095 4579 + 60714840 T a score=818842.000000 s hg38.chr19_GL949753v2_alt 749797 288 + 796479 ttttttttttttttgagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccacgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccactgtgcctggccCACA s panTro4.chr19 59949755 281 + 63644993 ttttttt-------gagatggaggctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaagcacc-cgccatcacgcccggcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaggttgagattacaggcgtgagccaccgtgcctggccCACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893516 286 + 60714840 ttttttttttttttgaaatggagtctttctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccatctcagcctcc--cgtagctgggattacaggcacc-cgccatcacacccagcta--------atttttgtagagatggggtttcaccatgttgaccaggctggtcttgaagtcctgacctcaggtgatccacccacctcagcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i ponAbe2.chr19 T 4579 C 0 s nomLeu3.chr10 103373357 284 - 106955855 ttttttttttttttgagacagag----tctctgttgcccaggctggagtgcaat-gcctaacctcagctcactgcaacttttgcctcctggtttcaagcaattctcccacctcagcctcccgcgtagctgggattacaggcacc-cgccatcatgcccggcta--------atttttgtagagatggggtttcacaatgttgaccaggctggtcttgaactcctgacctcaggtgatccacccacctcggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676163 282 + 64156825 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcaccgccccgtcatacccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACA i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55817899 282 + 59248254 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctctcgagtagctgggattacaggcacccccccgtcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttcagattacaggcatgagccaccgtgcctggccCACA i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47925850 279 + 51301725 ttttttt-------gagacaga--ctctctctgttgcccaggctggagtgcaat-gcctgacatcagctcactgcaacttctgcctcccggtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ccccatcatgcccggcta--------atttttgtagagacggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggcccaca i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47629060 281 + 50890351 Gtttttt-------gagacggagtctctctctgttgcccaggctggagtgcaat-gcctgacctcagctcattgcaacttctgcctcccagtttcaagcaattctcccacctcagcctcccgagtagctgggattacaggcacc-ctccatcatgcccggcta--------atttttgtagagacggggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctccc---aaagttgagattacaggcatgagccaccgtgcctggccCACG i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 45455 298 + 138250 ttttttttttttttgagactgag--tctctctgttgtgcaggctggagtgcagtggtgtgatctcagctcactacaacttctgcttcccaggttcaagtgattcacctgcctcagcccccagagtagctgggataacaggcacc-tgctatcattcctggctaatttttgtatttttgtagagacagggtttccccatgttaaccaggctggtctcgaactcctgacctctggttatccacccacctcagcccccccaaaatgttgagattacaggcatgagccaccgtgcccggccCACA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20089264 2803 - 122678785 I a score=7020.000000 s hg38.chr19_GL949753v2_alt 750085 4 + 796479 TTTT s panTro4.chr19 59950036 4 + 63644993 TTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893802 4 + 60714840 TTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373641 4 - 106955855 TTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676445 4 + 64156825 GTTA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818181 4 + 59248254 Gttt i macFas5.chr19 C 0 I 219 s papAnu2.chr19 47926129 4 + 51301725 gtta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629341 4 + 50890351 GTTA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45753 4 + 138250 TTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092067 4 - 122678785 TTTT i canFam3.chr1 I 2803 C 0 a score=123300.000000 s hg38.chr19_GL949753v2_alt 750089 40 + 796479 TTAAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT s panTro4.chr19 59950040 40 + 63644993 TTTAAAAAGGGGCAACTGCAGTGTAGTAGAACAAAGTTGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893806 40 + 60714840 TTTAAAAAGGGGCAATTGCAGTGTAGTAGAACAAAGTTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373645 40 - 106955855 TTAAAAAAGGGGCAACTGCAGTGTAGCAGAACAAAGTTGT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676449 40 + 64156825 TTTAAAAAGGGGCAACTGCAGTGTCGTAGGACAAAGTTGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818404 40 + 59248254 TTTAAaaaggggcaactgtagtgtcgtagaacaaagttgt i macFas5.chr19 I 219 C 0 s papAnu2.chr19 47926133 40 + 51301725 TTTAAAAAGGGGCAACTGCAGTGTCATAGAACAAAGTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629345 40 + 50890351 TTTAAaaaggggcaactgcagtgtagtagaacaaagttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 45757 39 + 138250 TTTTAAAAGGGG-AACTGCAGTGTAGTGGAACAAAGCTGT i calJac3.chr22_GL285922_random C 0 M 552 s canFam3.chr1 20092071 32 - 122678785 TTAAAAAA--------CACAGTGTATAGAGACAAAGTTGT i canFam3.chr1 C 0 C 0 a score=48048.000000 s hg38.chr19_GL949753v2_alt 750129 20 + 796479 GACCAATGCTAGGATA-CTCT s panTro4.chr19 59950080 20 + 63644993 GACCAATGCTAGGATA-CTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893846 21 + 60714840 GACCGATGCTAGGATACCTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373685 21 - 106955855 GACCAATGCTAGGATACCTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676489 21 + 64156825 GACCAATgctaggacacctct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818444 21 + 59248254 gaccaatgctaggacacctct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926173 21 + 51301725 GACCAATGCTAGGACACCTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629385 21 + 50890351 gaccaatgctaggatacctct i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20092103 19 - 122678785 AGCCAAAACTGGAAGACCT-- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 45796 552 + 138250 M a score=441965.000000 s hg38.chr19_GL949753v2_alt 750149 141 + 796479 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- s panTro4.chr19 59950100 141 + 63644993 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAA--ATGCCAGCTCGCTGGCCCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTTACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56893867 143 + 60714840 GTTCATCTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACATGCCACCTCGCTGGCCCCCCATTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373706 142 - 106955855 GTTCATTTCCTGACCCAGCCATGAATACACTGGAATAACTCATGCAAAACACGCCACCTCGCTAG-CCCCCGTTTCCCCACCCAACAAATGAAGGGGCTCTCACAGGTTCCTTTTTGTCCTGAAATTCATCACCAATGCAAAT---------------------------------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676510 143 + 64156825 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818465 143 + 59248254 gttcatttcctgacccagccacgaatacactggaataactcaggcaaaatacaccacctcgctggccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926194 142 + 51301725 GTTCATTTCCTGACCCAGCCACGAATACGCTGGAATAACTCAGGCAAAACACACCACCTCGCTAGCCCTCCACTT-CCCACCCAACCAATGAAGGGGCTCTCATAGGTCCCTTTTTGTCCTGAAATTCATCACCGATGCAAAT---------------------------------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629406 143 + 50890351 gttcatttcctgacccagccacgaatacgctggaataactcaggcaaaatacaccacctcgctagccctccgcttccccacccaaccaatgaaggggctctcataggtccctttttgtcctgaaattcATCACCGATGCAAAT---------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46355 143 + 138250 GTCTATTTACTGACCCAGCCATGAATAAACTGGAATCACTCATACAAAACACTCCACTTTGCTGGCCCCTCATTTCCCCACCCAGCAAACCAAGGGGCTCTCATAGGTCCTTTTTTGTCCTGAAATTCATTACTGATACAAAt---------------------------------- i calJac3.chr22_GL285922_random M 552 I 302 s canFam3.chr1 20092122 176 - 122678785 ATTTATTTCCTGACCTAGCCAAGAAGGGAATAGAACATAATAACAGACAAACACCACCTCCCAGG-TCCCAGTTTTCCCAACCAAGAAATGAAGGGGCCCTCAGAGGTCACCAATTGCCCTGAAATTCATTTCTGAAGAGAAACCAGAGTATTGCTGAAATTCATTTCTGATGCAAT i canFam3.chr1 C 0 C 0 a score=177098.000000 s hg38.chr19_GL949753v2_alt 750290 56 + 796479 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC s panTro4.chr19 59950241 56 + 63644993 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894010 56 + 60714840 TTC-T---TAAAAATCCTTTGCCTGGCAGTCCA-TGCCTGTCCTTCAGCATTTCCCAGATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373848 56 - 106955855 TTC-T---TAAAAATCCTTTGTCTGGCAGTCCA-TGCCTGCCCTTCAGCATTTCCCAGATC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676653 57 + 64156825 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818608 57 + 59248254 TTCTT---AAAAAATCCTTTGTCTGGCAGTCTA-GGCTTGTCTTTCAGCACTTCCCAGATC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926336 56 + 51301725 TTC-T---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629549 57 + 50890351 TTCTT---AAAAAATCCTTTGTCTGGCAGTCCA-GGCCTGTCTTTCAGCACTTCCCAGATC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46800 56 + 138250 TTC-TTAAAAAAAATCCTTTGGCTGGCAGTCCA-TGCCTGCCCATCAG---TTCCCAGATC i calJac3.chr22_GL285922_random I 302 C 0 s canFam3.chr1 20092298 57 - 122678785 TTT-T---TAAACATTCTTAGTCTCATAGCCTACTGCCTGTCCCTCAGCATTTCCCAGATC i canFam3.chr1 C 0 I 349 a score=1560.000000 s hg38.chr19_GL949753v2_alt 750346 2 + 796479 TG s panTro4.chr19 59950297 1 + 63644993 -G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894066 1 + 60714840 -G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373904 1 - 106955855 -G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676710 1 + 64156825 -G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818665 1 + 59248254 -G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926392 1 + 51301725 -G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629606 1 + 50890351 -G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46856 1 + 138250 -C i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20092355 349 - 122678785 I a score=1079094.000000 s hg38.chr19_GL949753v2_alt 750348 303 + 796479 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG s panTro4.chr19 59950298 303 + 63644993 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCACCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTTGTCCGCCTGCTGGGGCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894067 303 + 60714840 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTAGGAGCCTGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCCACACTTATCTCCTCTGGCCAGCCTGGCATTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103373905 299 - 106955855 ACCCTCAGGACTCACCAAGACAGAGGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGC-----CCTGAGCTCTGTGGCCAGGGAAGGGAAGTGGTGGCAGCCTGGGGCACAGGCTCAGGATGTGATGAGGGTGAAGAATGCTCTCCTCCCTTCCCCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTCGCCGGCTCCTCAGTACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGGGTTGTACCGTTCGTCCGCCTGCTGGGGCCTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60676711 302 + 64156825 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCTGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818666 302 + 59248254 ACCCTCAGGACTCACCGAGACAGAAGAGGGTGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGGGTTCTGTGGCCCGGG-AGGGAAGTGGTGGGAGCCT-GGGCACGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCGGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCCGCCTGCTGGGGCCTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926393 303 + 51301725 ACCCTCAGGACTCACCAAGACAGAAGAGGGCAGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGGGGGAGCCTGGGGCACGGGCTCAGGATGTGATGAGGTTGAAGAatgctctcctcccttcctccgcCAGCCCCGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCGTTCGTCTGCCTGCTGGGGCCTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629607 302 + 50890351 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCGGGGATGGAGACATGGTTCCTCAGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGCCT-GGGCATGGGCTCAGGATGTGATGAGGATGAAGAATGCTCTCCTCCCTTCCTCCGCCAGCCCTGGCCTTTCCTAATTGAGACTCATCGAGCCGTAGCCAGCTCCCCAGGACAGTGACTTGCACACAAGCTCCAAGGAGCCGCGCTTATCTCCTCTGGCCAGCCTGGCGTTGCACCATTCGTTCGCCTGCTGGGGCCTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 46857 303 + 138250 ACCCTCAGGACTCACCAAGACAGAAGAGGGCGGTCAGGGATGGAGACATGGTTCCTCGGCCCTGTCCTGAGCTCTGTGGCCAGGG-AGGGAAGTGGTGGGAGTCGGGGGCACAGGCTCAGGATGTGATGAGGATGAAGAATGCCCTCCTCCCTTCCTTCACCAGCCCCGGCCTTTCCTAATTGAGGCTCATCGAGCTGTAGCCGGCTCCTCAGTACTGTGACTTGCACACAAGCTCCAAGGAGGCTCGCTTATCTCCACCGGCCAGCCTGGCTCTGCACCACTCGTCTGCCCACTGGGGCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20092704 297 - 122678785 ATCCTCAGTACTCACCAAGACACAGAAGGGCAGGCAGGGATGGGGCCATGGTTCTTCAGCCC-ATCCAAAGCTCTGTAACCCAGG-AGGGAAGCTGCAGGGGCTG-GAGCAGAGACATCGGATGTGATGAGGATGCAGAGCCCTCTCCTCCCTTCCTGGATCTG-CCTGGCTTTTCCTAAGTGAGGATCATCAAGCTGGAGCCATGCCCTCAGTAGAGTGACTTGCACACAAGTTCACAGAAGCT-CATTTATCTTCTGTCACCAGCCTAGAGCCACACCAT--GTCTGCATCTTCAGGCATGG i canFam3.chr1 I 349 I 34018 a score=252942.000000 s hg38.chr19_GL949753v2_alt 750651 85 + 796479 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt s panTro4.chr19 59950601 85 + 63644993 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatgaaaaccacagtgagatatgacttcacacctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894370 85 + 60714840 TCTGTGTTCCCGTGCTCCCATAAACtccctaat-gtcactaggaaaatacgcatcaaaaccacagtgagatatgacctcacacctt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374204 85 - 106955855 TCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcactaggaaaatacgcatcaaaaccacagtgagatatgacttcacacctt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677013 85 + 64156825 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacaactt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55818968 85 + 59248254 CCTGTGTTCCCGTGCTCCCATAAACtccctgat-gtcgctaggaaaatactcatcaaaaccacagtgagatatgacttcacaactt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47926696 85 + 51301725 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-GTCGCTAGGAAAATActcatcaaaaccacagtgagatatgaCTTCACAACTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629909 85 + 50890351 CCTGTGTTCCCGTGCTCCCATAAACTCCCTGAT-Gtcgctaggaaaatactcatcaaaaccacagtgagatacgacttcacagctt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 47160 86 + 138250 GCTGTCCTCCCATGTTCCCATAAAGTCTCTGAtggtcgctaggaaaatgtacatcagaaccacagtgagatacgatttcacacttt i calJac3.chr22_GL285922_random C 0 I 1752 e canFam3.chr1 20093001 34018 - 122678785 I a score=395549.000000 s hg38.chr19_GL949753v2_alt 750736 185 + 796479 ctggaatggctgt-at-ttttttttttt-cttttgagacaaagtctcgttctttttgcccaggttggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt s panTro4.chr19 59950686 186 + 63644993 ctggaatggctgt-at-ttttttttttttcttttgagacaaagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---t---accacaccaggctaatttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894455 190 + 60714840 ctgggatggctgtaat-tttttttttttttttttgagacaaagtctcactctttttgcccaggctggagtgcagtggcgccatcttggctcactacaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtggctgggattataggtatg---taccaccacgccgggctaatttttgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103374289 187 - 106955855 ctgggatggctgt-aa-ttttttttttttcttttgagac--agtctcgctctttttgcccaggctggagtgcagtggtggtatctcagctcactacaacctccacctcccaggttcaagcgattctcctgcctcagcctcccaagtggctgggattataggtatg---taccaccatgccgggctaatttttgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677098 182 + 64156825 ctgggatggctat-aa--------tttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccgagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55819053 189 + 59248254 ctgggatggctat-aa-ttttttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctccggcctcagcctcccaagtggctggggttataggtgtg---caccaccacgctgggctaatttttgt i macFas5.chr19 C 0 I 1042 s papAnu2.chr19 47926781 189 + 51301725 CTgggatggctat-aa----tttttttttttttccagacagagtctcgctctttttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtatgtaccaccaccacgccgggctaatttttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47629994 179 + 50890351 ctgggatggctat-aatttttttttttttttttccagaaagagtctcgctcttcttgcccaggctggagtgcagtggcgccatctcggcccactacaacctccacctcctgggttcaagtgattctgcagcctcagcctcccaaatggctggggttataggtgtg---caccaccaca------taact----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=102285.000000 s hg38.chr19_GL949753v2_alt 750921 61 + 796479 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca s panTro4.chr19 59950872 61 + 63644993 atttttagtagagatggggtttcactgtgttggccaggctggtcttgaactcctgacctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56894645 61 + 60714840 atttttactaaagatggggtttcactatgttgcccaggctgatcttgaactcctgacctca i ponAbe2.chr19 C 0 I 4561 s nomLeu3.chr10 103374476 61 - 106955855 atttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677280 61 + 64156825 atttttagtatagatggggtttcaccacattggccaggctggtcttgaactccgcacttca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47926970 61 + 51301725 atttttagtagagatggggtttcaccacattggccaggctggtcttgaactccgaacttca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47630173 61 + 50890351 atttttagtagagatggagtatcaccacattggccaggctggtcttgaactccgaacttca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=571041.000000 s hg38.chr19_GL949753v2_alt 750982 464 + 796479 gttgatccacctgcctcggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatggaaaacagcagatattggtgagtatgcagagaaattgaactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca s panTro4.chr19 59950933 464 + 63644993 gttgatccacctgccttggtctcccaaagtgctgggattacaggcatgagccactgcacccgaccggctataa--ttttttttaatgtaaaatagcagatattggtgagtatgcagagaaattggactgcgcgtgcattgctggcagggacgtaacatggcgcccctgctgtggaaaacagttccagcagctcctccagaagttaaacgtgggattgccataaaatccagcaattccacttcggggtacacacctaaaagaactgaaaacagggtctctaac--atatttgtaca-cagtgttcatagcagctttattcacaatagccaaaaggtgaaaccacccacatgtccatcaacaacaatggataaacaacatgtggtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacgcctgtaatcccagca i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103374537 464 - 106955855 gttgatccgcctgcctcggcctcccacagtgctgggattataggcataagccaccgcacccgaccggctgtaa--ttttttttaatggaaaatagcaaatattggtgagtatgcagagaaattggaccgcgcgtgcattgctggcagggacgtaacatggtgcccctgctgtggaaaacagttttagcagctcctccaaaaggcaaacatggaattgccataaaatccagcaattccacttctgggtatacacctaaaagaattgaaaacagggtctctaacagatatttgtacaccagcgttcataacagctttattcacaatagccaaaaggtgaaaccaaccaaatgtccat---caacaatggataaacaacatgcagtatatacacacaaggtaatatcaaccagccttaactaaaagaataaaaatcagccaggcacagtggctcacacctgtaatcccagca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677341 465 + 64156825 ggtgatccgcccacattggcctcccagagggctggtattacaggcatgagccactgcgcccgaccagctataa--ttttttttaatggaaaacagcaaacgttggtgagtatgcagagaagttggactgcgcgtgccttgctggtggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccgtaaaatccagcaattccacttctgcgtatacacctaaaagaatcgaaaacaggatctcgaac--atatttgtacaccagtgttcctagcagctttattcacaatagccaagaggtgaaaccagccaaatattcatcaacaacaatggataaacaacgtgcggtatatacagacaaggtaacatcaaccaaccttcattaaaagaataaaaatcAgccgggcgcggtggctcacgcctgtaatcccagca i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47927031 466 + 51301725 ggtgatctgcccacatcagcctcccaaaaggctgggattacaggcatgagccactgcgcccgaccagctataa-tttttttttaatggaaaatagcAAACGTTGGTGAGTATGCAGAGAAGTTGGACTGCGCGTGCCTTGCTGGCGGGGACATAACATGGTGccactgctgtggaaaacagttttagcagCTCCTCCAAAAGTTAAACGTGGGATTGCCGTAaaatctagcaattccacttctgggtatacacctaaaagaattgaaaacaggatctCGAAC--ATATTTGTACAccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaatatccatcaacaacAATGGATAAACAACATGTGGTATATACAGACAAGGTAATATCAACCAGCcttcattaaaagaataaaaatcagccaggcgcggtggctcacgcctgtaatcccagca i papAnu2.chr19 C 0 I 140 s chlSab2.chr6 47630234 466 + 50890351 ggtgatctgcccacatcggcctcccaaagggctgggattacaggcatgagccactgcgcccgaccagctataattttttttttaatggaaaatagcaaacgttggtgagtatgcagagaagttggactgcgcgtgcattgctggcggggacataacatggtgccactgctgtggaaaacagttttagcagctcctccaaaagttaaacgtgggattgccataaaatccagcagttccacttctgggtatacacctaaaagaattgaaaacaggatctcgaac--atatttgtacaccagtgttcatagcagctttattcacaatagccaagaggtgaaaccagccaaata-ccatcaacaacaatggataaacaacatgcggtacatacagacaaggtaatatcaaccagccttcattaaaagaataaaaATCAgccgggcgcggtggctcacgcctgtaatcccagca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e macFas5.chr19 55819242 1042 + 59248254 I a score=72901.000000 s hg38.chr19_GL949753v2_alt 751446 83 + 796479 ctttgggaggccgaggcgggcggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac s panTro4.chr19 59951397 83 + 63644993 ctttgggaggccgaggcgggtggatcacctgaggtcaggagtccgagaccagcctggttaacatggtgaaaccccatctctac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375001 83 - 106955855 ctatgggaggccgaggcgtgtggatcacctgaggtcaggagttcgagaccagcctggttaacatggtgaaaccccgtctctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677806 83 + 64156825 ctttgggaggctgaggcgggtggatcacttgagatcaggagttcgagaccagcctggttaacatggtgaaaccccatctctac i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47630700 83 + 50890351 ctttgggaggctgaggcgggtggatcacttcaggtcaggagtttgagaccagcctggttaacatggtgaaaccccatctctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56894706 4561 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114397.000000 s hg38.chr19_GL949753v2_alt 751529 90 + 796479 taaaaatacaaaaa-ttagctgggcgttaaattagccgggcatggtggcaggtgcctgtaatcccagctacttgggagacggaggcatgag s panTro4.chr19 59951480 90 + 63644993 taaaaatacaaaaa-ttagctgggcgttaaattagctgggtatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899267 91 + 60714840 TAAAAATACAAAAATTTAGCTGGGCGTTaaattagccaggcatggtggcgcacacctgtaatcccagctacttgggagacggaggcatgag i ponAbe2.chr19 I 4561 C 0 s nomLeu3.chr10 103375084 90 - 106955855 taaaaatacaaaaa-ttagctgggcgttaagttagctgggcatggtggcgcgcgcctgtaatcccagctacttgggagacagaggcatgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677889 90 + 64156825 taaaaatacaaaag-ctagctgggtgttaaattagccgggcatggtggcacacacctgtaatcccagctacttgggagatggaggcatgag i rheMac3.chr19 C 0 I 2 s chlSab2.chr6 47630783 90 + 50890351 taaaaatacaaaaa-ttagctgggcattaaattagccgggcatggtggcacacgcctgtaatcccagctacttgggagatggaggcatgag i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I a score=114386.000000 s hg38.chr19_GL949753v2_alt 751619 211 + 796479 aatcgcttgaacctgggaggcagagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttaggaggctgaggcaggcagattgcctgagctcagcagttcaagaccagcctgggcaacacagtaaaaccc s panTro4.chr19 59951570 211 + 63644993 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcggcagagtgagactgtctcaaaaataaaaataaggccgggcgtggtggcccatgcctgtaatcctagtactttgggaggctgaggcaggcagattgcctgagctcaggagttcaagaccagcctgggcaacacagtaaaaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899358 211 + 60714840 aatcgcttgaacctgggaggcggaaatcgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactgtctcaaaaataaaaataaggccgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagaccagcctgagcaacacggtaaaaccc i ponAbe2.chr19 C 0 I 10 s nomLeu3.chr10 103375174 211 - 106955855 aatcgcttgaacctgggaggcggagattgcggtaagccgagatcgcaccactgcactccagcctgggcgacagagtgagactctctcaaaaataaaaataaggctgggcgcggtggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagattgcctgagctcaggagttcaagcccagcctaggcaacacggtaaaaccc i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=-1192.000000 s hg38.chr19_GL949753v2_alt 751830 4 + 796479 -----ccaa s panTro4.chr19 59951781 4 + 63644993 -----aaaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103375385 8 - 106955855 cgtctcta- i nomLeu3.chr10 C 0 I 2 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56899569 10 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=300726.000000 s hg38.chr19_GL949753v2_alt 751834 607 + 796479 aaaatacaaaaaaaaaa---tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgcgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagcgcttaggttgaagatgatgacaaagtctgggggatccatagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgttttttggttttttgagacggagtctcactctgtcgccgaggctggagtgcagtggcgcgatcttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcagcct s panTro4.chr19 59951785 611 + 63644993 aaaatacaaaaaaaaaaaaatagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgggacgcggaagttgcggtgagccgagatcgtgccattgcactccagcctgggtgacagagcgagattctgtctccaa---------aaaataaaaaatattataaaagaat-aaattcagatacatgctacaacgtgatggaccttgaagacattatgctaaaggaaatattccggacttgacagataaatactgcattgtgccgcttatctgaggtatcgagaggagtcaaattcatagagacagggattagaatggtggttgccaaggcctgggaaaagtggggagttactatttaatagggagagcttaggttgaagatgatgagaaagtctggggtatccatagtgggtgatggttacacaacactgtaaatgtatttatatttaatgccattgactgttttttgtttttttgttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgcgatctcggctcaccgcaacctccgcctcccaggttccagcgattctcctgcctcagcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56899579 605 + 60714840 gaaatacaaaaaaaa-----tagccgggcatggtggcaggcacctgtagt-ccagctactccggaggctgagacaggagaatggcttgaacccgggaggcagaagttgcagtgagccgagatcgtgccattgcactccagcctgggtgacagagcaagattctgtctccaaaaataaaataaaataaaaaatattataaaagaataaaattcagatacatgctacaacgtaatggaccttgaagacattatgctaaaggaaatattccagacttgatggataaatactgcattgttccacttatctgaggtatcgagaggagtcaaattcataaagacagggattagaatggtggtgg-caaggcctgggaaaagtggggagttgctatttaatagggagagcttaggttgaaggtgatgagaaagtctggggtatccacagtgg-tgatggttacacaacactgtaaatgtatttatatttaatgccattgactgtttttt--------gttttttgagacagagtctcactccgtcgccgaggctggagtgcagtggcgcgatcttggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcat i ponAbe2.chr19 I 10 C 0 s nomLeu3.chr10 103375395 603 - 106955855 gaaatacaaaaaaaa-----tagccgggcatggcggcaggcacctgtagtcccagctactccggaggctgagacaggagaatggcttgaacccgcgaggcggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagctagattctgtctccaa-----aaataaaataaaaaatattataaaagaataaaattcagatacgtgctacaacatgatggaccttgaagacattacgctaaaggaaataatccagatttgacggataaatactgcattgttccacttatttgcggtatcgagaggagtcaaactcatagagacagggattagcatggtggttgccagggtctgggaaaagtggggcgttactatttaatagggggagcttaggttgaagatgatgat-aagtctgaggtatccatagtgg-tgatggttacacagcactgtaaatatatttatatctaatgccattgactgttttttgtt------ttttttgagacggagtctcgctctgtcgccgaggctggagtgcagtggcgtgatcttggctcaccacaacctccgcctcccaggttcaagcgattctcctgtctcagcat i nomLeu3.chr10 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e chlSab2.chr6 47630873 2 + 50890351 I e papAnu2.chr19 47927497 140 + 51301725 I e macFas5.chr19 55819242 1042 + 59248254 I e rheMac3.chr19 60677979 2 + 64156825 I a score=1745086.000000 s hg38.chr19_GL949753v2_alt 752441 766 + 796479 cctgagtagctgggactacaggtgcgtgccaccatgcctagttgattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgagaactatcagggtgttgatatct-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGACCATGGTTGAATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATaaatgctttaagctgcatagaattttaaacgtgttaataaaagtagttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacgagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga s panTro4.chr19 59952396 764 + 63644993 cctgagtagctgggactacaggtgcgcgccaccatgcctagttgattttttgtatttttagtacagacggggtttcatcgtgttagccaggatggtctcgatct--gctaaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccagtgccgttgacttgtatgtgcacttacaggtggttaaaatgAGGACTATCAGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TCATTCAGTGGCCATGGTTGAATGCCTGCCACCTTTCAGATATTATGTCAGGCACTCAGTATTGGCAGTTTTATCCATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGC--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggcgtttttgtttgcacttattgaacaagtggtttcatgcttatccctgcagaatactatgagatttgtcataagggttataaaactataaacccggctgggcgtggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggcagatc-acctgaggtcgggagtttgagaccagcctgaccaacatggagaaacgccatctctactaaaaatacaaaattagctgggtgtggtggcacatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900184 763 + 60714840 cctgagtagctgggactacaggtgcgtgccaccatggctagttaattttttgtatttttagtagagacaggatttcaccgtgttacccaggattgtcttgatct--cctgaccttgtaatttggcctcccgaagtgctgggaatacaggcgtgagccaccgtgcctggccaatgccattgacttgtatgtgcacttacaagtagttaaaattataaatATCAGAGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTTCCCTACATCTC----TAGTTCAGT-ACCATGGTTGGATGCCTGCCACCTTTCAAATATTATGTCAGGCACTCAGTATCAGCAGTTTTATCAATTAAAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttggtgtttttgtttgcatgtattgaacaagtggtttcatgcttatccctgcagaataccatgagatttgccataagggttataaaactataaaccTggctgggcgcggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaacgctgtctctactaaaaatacaaaattagttgggcgtggtggcgcatgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103375998 761 - 106955855 cctgagtagctgggactacaagtgcgtgccaccatgctgagttgattttttgtatttttagtaaagatggggtttcaccgtgttagccaggatggtctcgatct--cctgaccttgtgatttggcctcccaaagtgctgggaatacaggcatgagccaccgcgcccggccaatgccattgacttgtatgtgcacttacaagtggttaaaatgataaat---AGGGTGTTGATATCT-AAAAACCTCCCTGCCATCATCTCCCCTACATCTC----TAATTCAGTGACCATGGCTGAATGCCTGCCACCTTTCAAATGTTATGTCAGGCGCTCAGTATCGGCAGTTTTATCAATTATAAATGCTTCAAGCTGCATAGAACTTTAAACGT--TAATAACAGTGGTTATaaatctttaatacataagctggctttaaaattattggtaaaataagattagaaatgtcttaagaatcgttggcatttttgtttgcatttattgcacaagtggtttcatgcttatccctgcagaatactatgagattggtcataagggttagaaaactataaaccTggcttggcgcagtggctcatgcctgtaatcccaacactttgggaggccgaggcaggtggatc-acctgagatcgagagttcgaggccagcctgaccaacagggagaaacgccgtctctactaaaaatacaaaatcagctgggcgtggtggcgcatgcctataattccagatactcaggaggctgaggcaggagaatcgcttga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60677981 769 + 64156825 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgcattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATGTTAGGTCAGGTACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaac-----aataacagtggttataaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaagtggttttgtgcttatccctgcagaatactatgagatttgccacaagggttataaaactataaactcggccgggcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggtggatcaacctgaggttgggagttcgagaccagcctgaccaacatggaaaaatcccatctctaccaaaaatgcaaaattcgccgggcatggtagcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i rheMac3.chr19 I 2 M 160 s macFas5.chr19 55820284 771 + 59248254 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccacattaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccaatgccattgactcgtatgtgcacttccaagtggttaaaatgataaatatcagggtgtttatatctAAAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGTACTCAGCATCAGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTAAAACGT--TAGTAACAGTGGCTATaaatctttaatacaaaagctggctttaaaattattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattgaacaaatggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactctaaaGTCGAGcgggcacggtggcgtacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-atctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagccgggcgtggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i macFas5.chr19 I 1042 C 0 s papAnu2.chr19 47927637 770 + 51301725 cctgagtagctgggactacaggctcccgccaccatgcctggctagttttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccaatgcCATTGACTCGTATGTGCACTTCCaagtggttaaaatgataaatatcagGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACATCTCCGATTAACTCAGCGACCGTGGCTGAATGCCTGCCACCTTTCAAATATTAGGTCAGGCACTCGGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGAATTTTAAACGT--TAATAATAGTGGTTATAAATCTTCAATACAAAAGCtgactttaaaattattggtaaaataagattagaaatgtcttaagaattgttAGCGTTTCTGTTTGCATTTATTGAACAAGTGGTTTTGTGCTTATCCCTGCAGAATACTATGAGATTTGCCATAAgggttataaaactataaactcagccgggcacagtggctcacgcctgtaatcccaacgctttgggaggctgaggtgggcggatc-acctgaggttgggagttcgagaccagcctgactaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcgcgtgactgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i papAnu2.chr19 I 140 C 0 s chlSab2.chr6 47630875 770 + 50890351 cctgagtagctgggactacaggctcccgccaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttaggtaggatggtctcgatctaccctgaccttgtgattcggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccAATGCCATTGACTCGTATGTGCACTTCTAAGTGGTTAAAATGATAAATATCAGGGTGTTTATATCT-AAAACCCTCCCTGACATCATCTTCTCTACGTCTCCGATTAACTCAGCGACTGTGGCTGAACGCCTGCCACCTTTCAAATATTAGGTCGGGCACTCAGTATCGGCAGTTTTATCAATTATAAATGCTTTAAGCTGCATAGaattttaaacgt--taataacagtggttataaatctttaacacaaaagctggctttaaacttattggtaaaataagattagaaatgtcttaagaattgttagcgtttctgtttgcatttattaaacaagtggttttgtgcttatccctgcagaatactatgagatttgccataagggttataaaactataaactcaAccgggcacagtggcttacgcctgtaatcccaacactttgggaggccgaggcaggcggatc-acctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaccaaaaatgcaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttga i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=249334.000000 s hg38.chr19_GL949753v2_alt 753207 179 + 796479 acccgggaggcagaagttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaata------aaaCATTtgttttttgtagagttgggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg s panTro4.chr19 59953160 170 + 63644993 acctgggag-----------------ccgagattgcgccactgcactccagcctgggcaacaagagtgaaactccatctaaaat-aaataaaaatagaaataaaaCATTtgttttttgtagagttggggggtttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatccaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56900947 177 + 60714840 acccgggaggcagaagttgcagtgagccaagattgcgccactgcactccagcctgggcaacaagagcgaaactccgtctaaaataaaataaaaata------aaaaaaTTGCtttctgtagagttgggg--tttcactacgttgcccaggctgctctt-gaa---ctcctgggctcaagcaatcctccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103376759 175 - 106955855 acccgggaggcagaggttgcggtgagctgagattgcaccactgcactccagcctgggcaagaagagcgaaactctatcta-----aaaaaaaatta------aaaaaaCtgttttttgtagagttaggg--tttcactatgttgcccaggctggtctt-gaactcctcctgggctcaagcaatctgccg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821055 172 + 59248254 acccaggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtctaaaaa-aaaaaaaa---------aaaaaaaaGTGttttgtagaggtggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaagcaatccactg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928407 168 + 51301725 acccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccatct------aaaaaaaa---------aaaaattgtttttttgtagagttggt---tttcactatgttgcccaggctggtcttggaa---ctcctaggctcaagcaatccgctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631645 172 + 50890351 acctgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacaagagcaaaactccgtcttaaaa-aaaaaaaa---------aaaaaaTGTttttttgtagagttggt---tttcactatgttgcccaggctggtctt-gaa---ctcctaggctcaatcaatccgctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I e rheMac3.chr19 60678750 160 + 64156825 M a score=103032.000000 s hg38.chr19_GL949753v2_alt 753386 42 + 796479 acctcagcctcccaaagtgctgggattacaagtgtgagccac s panTro4.chr19 59953330 42 + 63644993 acctcagcctcccaaagtgctgggattacaagtatgagccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901124 42 + 60714840 acctcggcctcccaaagtgctgggaatacaggtgtgagccac i ponAbe2.chr19 C 0 I 16 s nomLeu3.chr10 103376934 42 - 106955855 acctcagcctcccaaagtgctgggattacaagtgtgagccac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678910 42 + 64156825 Acctcagcctcccaaagtgctgggattgcaggtgtgagctac i rheMac3.chr19 M 160 C 0 s macFas5.chr19 55821227 42 + 59248254 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928575 42 + 51301725 acctcagcctcccaaagtgctgggactgcaggtgtgagctac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631817 42 + 50890351 acctcagcctcccaaagtgctgggattgcaggtgtgagctac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=24788.000000 s hg38.chr19_GL949753v2_alt 753428 16 + 796479 tgtgcctggccCTATT s panTro4.chr19 59953372 16 + 63644993 tgtgcctggccCTATT i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376976 16 - 106955855 tgtgcctgaccCTACT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678952 16 + 64156825 tgtgcctgtccCCACT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55821269 16 + 59248254 tgcgcctggccCCACT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47928617 16 + 51301725 tgcgcctggccccact i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47631859 16 + 50890351 tgcgcctggccACATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e calJac3.chr22_GL285922_random 47246 1752 + 138250 I a score=320686.000000 s hg38.chr19_GL949753v2_alt 753444 163 + 796479 GGGTCCTTTT-AAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAATCACCCGATGGCAGAAATTggggtgctcctggcatgtggtcggtcgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcggagaatgatccgg s panTro4.chr19 59953388 164 + 63644993 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AAGTCAGTCACCCGATGGCAGAAATTggggtgctcctggcatctggtcggtcgaagccaaggacactgctcagcattgtgcagtgcacaggacggccccgcccaggcggagaatgatccgg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103376992 164 - 106955855 GGGTCCTTTTTAAAAGATACAT--AAAAAATCAAATGCAACAGTG------AACTCAGTCATCCGATGGCAGAAATTggggtgctcctggcatctggtcggttgaagccaaggacactgctcagcattctgcagtgcacaggacggccccgcccaggcagggaatgatccgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60678968 171 + 64156825 GCGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccatggcagagaatgatccgg i rheMac3.chr19 C 0 I 1315 s macFas5.chr19 55821285 171 + 59248254 GGGTCCTTTTTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCTGATGGAAGAAATTggggtgcctctggcgtctggtcagttgaagccaaggacactgctcagcattcttcaatgcagaggacagccccaccacggcagagaatgatccgg i macFas5.chr19 C 0 I 7 s papAnu2.chr19 47928633 171 + 51301725 GGGTCCTTTCTTAAAGATACATGAAAAGAATCAAACGCAACAGTGAAGGT-AAGTCAGTCCCCCGATGGCAGAAATTGGGGTGCCTCTGGCATCTGGTCAGTTGAAGCCAAGGACACTGCTCAGCATTCttcaatgcacaggacagccccaccGCGGCAGAGAATGATCCGG i papAnu2.chr19 C 0 I 7 s chlSab2.chr6 47631875 171 + 50890351 GGGTCCTTTTTAAAACATACATGAAAAGAATCAAACACAACAGTGAAGGT-AAGTCAGTCACCCGATGGCAGAAATTggggtgcctctggcatctggtcagttgaagccaaggacactgctcagcattcttcaatgcacaggacagccccaccacggcagagaatgatccgg i chlSab2.chr6 C 0 I 7 s calJac3.chr22_GL285922_random 48998 148 + 138250 gggt--ttttTTAAAGACACATAAAAAGAATCAAATGTGACAGTTAAGGTCAAGTCGATCACCCAACGCCAGAAATCggggtgctcctgacatctggtgggttgaagcc-agaacaccattcaacattctgaaat-cacaggacggccccGG-------------------- i calJac3.chr22_GL285922_random I 1752 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I a score=47517.000000 s hg38.chr19_GL949753v2_alt 753607 43 + 796479 TGACACATATAGGTGGGAAGGATGCACGAATGATGGCGTTTAG s panTro4.chr19 59953552 43 + 63644993 TGACACATGTAGGTAGGAAGGATGCACGAATGATGGCGTTTAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377156 43 - 106955855 TGACACATGTAGGTGGGAAAGATGCACGAATGATGGCATTTAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821463 32 + 59248254 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i macFas5.chr19 I 7 I 306 s papAnu2.chr19 47928811 32 + 51301725 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i papAnu2.chr19 I 7 C 0 s chlSab2.chr6 47632053 32 + 50890351 TGACACATGTAGGTG-----------TGATTGATGGCATTTAG i chlSab2.chr6 I 7 C 0 s calJac3.chr22_GL285922_random 49146 43 + 138250 TGCCACGTGTGGGTGGGAAGGATGCACAGATGTTGGTGTTTAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=6423.000000 s hg38.chr19_GL949753v2_alt 753650 4 + 796479 GAAG s panTro4.chr19 59953595 4 + 63644993 GAAG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377199 4 - 106955855 GAAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821801 4 + 59248254 aaag i macFas5.chr19 I 306 C 0 s papAnu2.chr19 47928843 4 + 51301725 AAAG i papAnu2.chr19 C 0 I 295 s chlSab2.chr6 47632085 4 + 50890351 AAAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49189 4 + 138250 GAAG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=169104.000000 s hg38.chr19_GL949753v2_alt 753654 111 + 796479 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATTATTCTTAGGGCCTTCTCTCTTATGGAGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG s panTro4.chr19 59953599 107 + 63644993 AATATTATCACTTCTTTCCCGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCTTATG-AGGCTCCAAGCCAGGGTTGCCATGGCAGAAGATG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103377203 107 - 106955855 AATATTATCACTTCTTTCCCATAAGAACAACTTAGAGCAAGAAAATGGTATT---CTTAGGGCCTTCTCTCCTATG-AGGCTCCAAGCCCGGGTTGCCATGGCAGAAGATG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821805 107 + 59248254 aaTATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGCTGCCATCGCAGAAGATG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929142 107 + 51301725 aatattatcacTTGTTTCCCATAAGAGCaacttagagaaagaaaatggtatt---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGGTTGCCATCGCAGAAGATG i papAnu2.chr19 I 295 C 0 s chlSab2.chr6 47632089 107 + 50890351 AATATTATCACTTGTTTCCTGTAAGAGCAACTTAGAGCAAGAAAATGGTATT---CTTAAGGCCTTCTCTCCTATG-AGGCTCCAAGCCAGGTTTGCCATCGCAGAAGACG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49193 102 + 138250 AGTGTCATTACTTCTCTCCCATAAGAGGAACTTAGAGCGAGAAAATGATATT---CTTAGGGC---CTCTCCCGTG-AGGCTCCAATC--GTGTTGCCGTGGCAGAGGCTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e ponAbe2.chr19 56901166 16 + 60714840 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=1585737.000000 s hg38.chr19_GL949753v2_alt 753765 775 + 796479 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAACTGTCACC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGCGCT-CAGACGCGACACGCCGTGACGACTCCGCGGCAGGCAGCCGGACCTGTCCTCTGGCGTGCGGTTCACGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATACGTTGCCTCTGAATC-ACGCCAGGCAGGCTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTTGATATGAATGAAGATAGAGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACGCTTCCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC---TCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaaaGGAAAGCTGGCTTTCTAGTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACGCTAGGAGGGCCACCTAA---CATCCTCCGTCCCACGCAATGGGGTGTTTCTGGAGCACTCCGGT-TTATCAGGGACCCTGTCAGTTGCCATCGCACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATATTGAAAACATGTTACAGCCAGGAGCGG s panTro4.chr19 59953706 775 + 63644993 CTGGGCTTG-CTTTTTCCTTGAGAGAACTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTGCTTTGGAGAAGTGCT-CAGACGCGACACGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCATGGGCTGTGTTTATCCCCCTGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTG------TGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACCG-AACAGCCTGACTAGGAAGCCAGAAAGACGCTGCCGGCTTT--AGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAAAAGCCCAGAACACTTTCTGGAGATAGCGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCC--CTCACCTCTGACTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAAAAAAAAA--GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCTCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGCAATGGGGTGTTTCTGGAGCACTCCGGTGTTATCAGGGACCCTGTCAGTTGCCATCACACATGTATATGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901182 788 + 60714840 CTGGACTCG-CTTTTTCCTTGAGAGACTTGTACTCGAGATGATGTAAATGTCTCCAGCC-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCTACAGATGCAACATGCCGTGATGACTCCGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCCCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTTTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTGCGCTACAGCAGCAGCCTGACTAGAAAGGCAGAAGGACGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTCCTCGATATGAATGAAGATGGGGCACTTCCACACCGCGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGTGAGGGGGTGATGCAGCGGACAGCTATGGCTGATGACCCCCCCCTCACCTCTGACTCCC----------CCTCCCTTCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTTTCCCTGTTTGGGGTTTGCTGGCTGGAAAAAAAAAAAAAAA-----GGAAAGCTGGTTTTCTACTAAAAACCACTTCTTTTGTCCATTTATCAAACTCAAACCCTAGGAGGGCTACATAA---CATCCTCCGTCCCAGGCAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCGGGGACCCAGTCAGTTGCCATCGCATATGTATATGGGGCCATCCCCTATACCACCGAAGAGGGGGGGATGTTGAAAACATGTTACAGCCAGGAGCGG i ponAbe2.chr19 I 16 C 0 s nomLeu3.chr10 103377310 780 - 106955855 CTGTGCTCG-CTTTTTCCTTGAGAGAATTGTACTCAAGATGATGTAAATGTCGCC--CC-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CAGACACAACACGCTGTGATGACTCAGCAGCAGCCAGCTGGACCTGTCCTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCCGGTTCCTTCA----CAGCCACCTTGGGAAATATGTTGCCTCTGAATC-ACGCCAGGCAGGGTCTCACTGTGCGACTGTGTGCTGCGGGGCTGGAAATCAGGGTGACACTCCGCTACAGCAGCAGCCTGACTAGGAAGGCAGAAGGACGCTGCCATCTTTAGGGTTTGTCGTTTGACTTTCCTCAATATGAATGACGATGGGGGACTTCCACACTGTGCAACAGGAAAAGCCCAGAAAACTTTCTGGAGATAGCGAGGGGGTGATGCAGCAGACAGCTATGGCTGATGACCCCC--CTTACCTGTGGCTCCC----------CCTCCCTCCCTGCTTTCTGAACGCACATCCATCACCAACTATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGGAAAAAAAAAGAAAA-----GGAAAGCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTAGGAGGGCCACATAA---CATCCTCCGTCCCAGGAAACGGGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCCGGTCAGTTGCCATCGCATATGTATATGGGGCCAGCCCCTGTGCCACCAAAGA-GCGGGGATGTTGAAAACGTGTTACAGTCAGGAGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55821912 787 + 59248254 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCGCC--CT-GGGTGCCACTTGGGTGGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGTGTTTATCCCTCTGGTTCCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGTGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCCACACTGCACAACAGGAGAAGTCCAGAAAACTTTCTGGAGATAGCGAGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCCTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCTACTAAAAACCACTTCCTTTGCCCATATATCAAACTCAAACCCTCGGTGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA--GGGGGATGTTGGAAACTTGTTACAGCCGGGAGCGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47929249 782 + 51301725 CTGGACTCG-GTTTTTCCTTGAGGGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCCCTTGGGTGGTTTGGAGAAGTGCT-CGGACTCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTCGCGGTTCACGGGCTGTGTTTATCCCTCTGGTACCTTCA----CAATCACCTTGGGAGATACGTTGCCTCTGGATC-ACGCCAGGCAGGTTCTCCCTGTGCGACTGTGTGCTGCAGGGCTGGAAATCAGGGTGGCACTCCGCTACAGCGGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCATCTTTAGAGTTTGTCCTTTGACTTTACTCGATATGAATGAAGATGGGGCACTTCTACACTGCACAAC---AGAAGTCCAGAAAACTTTCTGGAGATAGTGAGAGGGTGATGCAGCGAACAGCTATGACTGATGACTGCC--CTCACCTCTGACTCCC----------GCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CTTGTTTGGGGTTTgctggctgg---aaaaaaaaaaaaaaaa-ggaagcctggCTTTCTACTAAAAACCacttcctttgcccatttatcaAACTCAAACCCTCGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAAGTGTTTCTGGAGTACTCTGGT-CTATCAGGGACCTGGTCAGTTGCCATCGCGTATGTATGTGGGGCCAGCCCCTGTGCCACCGAAGAgggggggATGTTGGAAACTTGTTACAGCCGGGAGCGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632196 778 + 50890351 CTGGGCTTGTTTTTTTCCTTGAGAGAATTGTACTCAAGGTGATGTACATGTCACC--CT-GGGTGCCACTTGGGTAGTTTGGAGAAGTGCT-CGGACGCAACACGCCCTGATGAGTCAACAGCAGCCAGCTGGACCCGTCTTCTGGCTTGCGGTTCACGGGCTGT--------CTCTGGTTCCTTCACAATCAATCACCTTGGGAGATACGTTGCCTCTGAATC-ACGCCAGGCAGGTTCTCCCTGTGCGAC--TGTGCTGCAGGGCTGGAAATGAGGGTGGCACTCCGCTACAGCAGCAACCTGACTAGGAAGGCAGGAAGATGCTGCCACCTTTAGAGTTTGTCCTTTGACTTTACTCAATATGAATGAAGATGGGGCAGTTCCACACTGCATAACAGGAAAAATCCAGAAAACTTTCTGGAGAT----AGAGGGTGATGCAGCGGACAGCTATGACTGATGACTGCC--CTCACCTCTGACTGCC----------CCTTCCTCCCCGCTTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGGGTTTGCTGGCTGGaaaaaaaaaaaaaaaaaaa-GGAAGCCTGGCTTTCCACTAAAAACCACTTCCTTTGCCCATTTATCAAACTCAAACCCTTGGAGGGCCACATAACATCATCCTCCATCCCAGGCAACGAGGTGTTTCTGGAGCACTCCGGT-GTATCAGGGACCTGGTCAGTTGCCATCGCATACGTATGTGGGGCCAGCCCCTGTGCCACCGAAGA-GGGGGGAGGTTGGAAACTTGTTACAGCTGGGAGCGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 49295 758 + 138250 CCAGACTTG-TTTTTCCCTTGAGA----TGGTGTCAACATGGTGTCAATGTCGCC--CTGGGGTGCCACTTGGGTGGTTTGGGTATGTGCT-CAG------------------------CAGCCGCCAGCTGGACCCGTCTTGTGCCTTGCAGTTCATGGGCTGTGTTTATGCCCCTGGTTCCTTCA----CGGGCACCTTGGGAGCTTTGTTGCCTCTGAATCAACACCAGGCAGGGTCTCACCATGAGACTGTGTGCTGTGAAGCTGGAAATCAAGGCCACACTCTGCTACAGCAGCAACCTGAGTGGGAAGGCAGGAAGGCGCCGCCGTCTTTAGAGTTTCTCTTTTGACTTTACTCGACGTGAATGAAGACAGAGCACTTTCACACTGCACAGCAGGAG--GTCCAGAAAGCCTCCTGGAGATCGGGAGGGGGTGATGCAGCAGACAGCTGTGGCTCATGACGCCC---TCACCTCTGCCTCCCTCTCCCTCCTTCTCCCTCCCCCATTTCTGAACGCACATCCATCACCAACCATAGGTT--CCTGTTTGGAGTTTACTGGCAGGAAAGAAAAAAA---------GGAAAGCCGGCTTTCTACTAAAAACCACTTCCTTTGACCATTTCTCAAACTC-AACTCTAGGAGGGCCACACATCGCCATCCTCCGTCCCAGGGAACTGGGTGTTTTTGGGGTGCTCAGGT-GTATCAGGGACCCAGTCGGTTGCCACTGAATGTACATATGGGGCCAGCCGCAGTGACGCCAAAGG--GGGGGATATTGAAAACATCTTATAgctgggagcag i calJac3.chr22_GL285922_random C 0 I 1069 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=21195.000000 s hg38.chr19_GL949753v2_alt 754540 11 + 796479 Tgcccccttgg s panTro4.chr19 59954481 11 + 63644993 Tgcccccttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901970 11 + 60714840 Tgcccccttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378090 11 - 106955855 cgcccccttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55822699 11 + 59248254 Tgcccccttgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930031 10 + 51301725 TGCCccttgg- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632974 11 + 50890351 Tgcccccttgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51122 11 + 138250 tgccctctggg i calJac3.chr22_GL285922_random I 1069 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e rheMac3.chr19 60679139 1315 + 64156825 I a score=50600.000000 s hg38.chr19_GL949753v2_alt 754551 18 + 796479 ttcaagcagttcttctgc s panTro4.chr19 59954492 18 + 63644993 ttcaagcagttcttctgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56901981 18 + 60714840 ttcaagcagttcttctgc i ponAbe2.chr19 C 0 I 354 s nomLeu3.chr10 103378101 18 - 106955855 ttcaagcagttcttctgc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680454 18 + 64156825 ttcaagcagttcttctgc i rheMac3.chr19 I 1315 C 0 s macFas5.chr19 55822710 18 + 59248254 ttcaagcagttcttctgc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930041 18 + 51301725 ttcaagcagttcttctgc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47632985 18 + 50890351 ttcaagcagctcttctgc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51133 15 + 138250 ttcaagcaattttgc--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=124271.000000 s hg38.chr19_GL949753v2_alt 754569 44 + 796479 ctcagcctccctaatagctgggattaca-ggcgtgcaccatcacg s panTro4.chr19 59954510 44 + 63644993 ctcagcctccctagtagctgggattaca-ggcgtgcaccatcatg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902353 45 + 60714840 ctcagcctctctagtagctgggattacagggcgtgcaccatcacg i ponAbe2.chr19 I 354 C 0 s nomLeu3.chr10 103378119 44 - 106955855 ctcagcctccctagtagctgggattgca-ggcgtgcaccatcacg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680472 44 + 64156825 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822728 44 + 59248254 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930059 44 + 51301725 ctcagccttcctagtagctgggattaca-ggagtgcaccatcaCG i papAnu2.chr19 C 0 M 503 s chlSab2.chr6 47633003 44 + 50890351 ctcagcctccctagtagctgggattaca-ggagtgcaccatcacg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51148 41 + 138250 ctcagctcacctagtagctggcattaca-ggcatgcaccacg--- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I a score=108854.000000 s hg38.chr19_GL949753v2_alt 754613 51 + 796479 cctgg-ccactgttatgtagtttttaCCACAATTTAAAAAA-GGAA--AGAGTGC s panTro4.chr19 59954554 51 + 63644993 cctgg-ccactgttatgtacttttTACCACAATTTAAAAAA-GGAA--AGAGTGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902398 53 + 60714840 cctggcccagtgttacatactttttaCCACAATTTAAAAAAGGGAA--AGAGTGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378163 51 - 106955855 cctgg-ccagtgttacgtacttttTACCACAATTCAAAAAA-GGAA--AGAGTGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680516 51 + 64156825 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822772 51 + 59248254 cctgg-ccagtgttgtgtacttttTATCACAATTTAAAAAA-GGAA--AGAGTGC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633047 51 + 50890351 cctgg-ccagtgttgtgtacttttTATCACAATTTTAAAAA-GGAA--AGAGTGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51189 53 + 138250 cctgg-ccagtgctctatacttttTATCACAATTTAAAAAA-GGAAAGAGAGTGC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20093001 34018 - 122678785 I e papAnu2.chr19 47930103 503 + 51301725 M a score=162511.000000 s hg38.chr19_GL949753v2_alt 754664 70 + 796479 CTGGGTGAGTCCTACGCAC-CTATTCGGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT s panTro4.chr19 59954605 69 + 63644993 CTGGGTGAGTCCTAC-CAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCGGCCCAC----CCATCTGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902451 70 + 60714840 CTGCGTGAGTCCTACACAC-CTATTCAGAGATCCAAAGGCTTTGACG---TTATCCTCGGCCCAC----CCATCTGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378214 70 - 106955855 CTGGGTGAGTCCTATGCAC-CTATTCAGAGAACCAAAGGCTTTGAGG---TTATCCTCAGCCCAC----CCATCTGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680567 73 + 64156825 CTGGGTAAATCCTATGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTGTATCCTCAGCCCAC----CCATCTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822823 73 + 59248254 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTTTGAGGCTTTTATCCTCAGCCCAC----CCATCTCAT i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47633098 70 + 50890351 CTGGGTGAGTCCTACGCAC-CTATTCAGAGAACCAGAGGCTCTGAGG---TTATCCTCAGCCCAC----CCATCTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51242 71 + 138250 TTGGGTGAGCCCTACGCACATTATTTAGAGAACCAGAGGTTTTGAGA---TTATCCTCAGGGCCC----CCATCTGAT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127019 71 - 122678785 CCAGATGAATCCTAT--AC-ATATTTAGAGAACCAGAGGTTTCGAGG---TTACTCTCAGACTACTGTACTATCAGT- i canFam3.chr1 I 34018 C 0 e papAnu2.chr19 47930103 503 + 51301725 M a score=166234.000000 s hg38.chr19_GL949753v2_alt 754734 73 + 796479 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACACAGTCTCCgg s panTro4.chr19 59954674 71 + 63644993 GGGAGTGTTTCTCAAACTTGCTTTTCCGTGATCTCCCAGTAAGAAATACC-TACT------ACACACACA--GTCTCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902521 73 + 60714840 GGGAGTGTTCCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATACC-TACT------ACACACACACTGTCTCCGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378284 73 - 106955855 GGGAGTGTTTCTCAAACTTGCTTTTCCATGAACTCCCAGTAAGAAATAGC-TACT------ACACACACACTGTCTCCGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680640 67 + 64156825 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAATGTCCT------ACACACACACACACTCCTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822896 65 + 59248254 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT--------ACACACACACACTCCTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930620 67 + 51301725 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAAcgtcct------acacacacacacactcctg i papAnu2.chr19 M 503 C 0 s chlSab2.chr6 47633168 63 + 50890351 GGGAGTGTTTTTCAAACTTGCTTTT-------CTCCCAGTGAGAAATAACGTCCT----------ACACACTCTCTCCTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51313 79 + 138250 GGGAGTGTTTCTCTAACTTGCTTTTCCATGATCTCCCAGTAAGAAATCCA-TACTACACACACACACACACACTCTCCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127090 64 - 122678785 AGAAGTATTTCTCAAACTAGTTTTTCCCTGATCCCACAGTAAGAA----------------ATGCACACATtgtataagg i canFam3.chr1 C 0 I 82 a score=364969.000000 s hg38.chr19_GL949753v2_alt 754807 147 + 796479 tcggcatgcttagggtagtcttccaattcccc-ctcctggtatttacaccctggagtggtccgctcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt s panTro4.chr19 59954745 147 + 63644993 TCGGCATGCTTAGGGTAGTCTTCCAattcccc-ctcctggtattcacaccctggagtggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacacagcaagct----cacgcacgtggttgttggtgtgattctgttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902594 147 + 60714840 TCGGTGTGtttagggtagtcttccgattcccc-ctcctggtattcacaccctggactggtccactcctcttgggctgaacctgtaacttgctcccaagcaagagcacatagcaaact----cacgcacatggttgtcggtgtgattgtttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378357 146 - 106955855 TCGGCGTGCTtagggtggccttccgattcccc-ctcccggtattcccaccctggagtggtccactcctcttgggctgaacctgtaacttactcccaagcaagagcacatagcaagct----cacgcacgtggttg-cggtgtgattctgttt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680707 139 + 64156825 TCGGCGTG-----------CTTCCgattcccc-ctcctggta-tcacaccctggaggggtccactccttttgggctgagtctgtaacttgcccccaagcaagagcatacagcaagctcacgcacgcacgtggttgttggtgtgattcagttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55822961 135 + 59248254 TCGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930687 139 + 51301725 tcGGCGTG-----------CTTCCGATTCCCC-CTCCTGGTA-TCACGCCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGCAAGCTCACGCACACACGTGGTTGTTGGTGTGATTCAGTTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633231 135 + 50890351 TCGGTGTG-----------CTTCTGATTCCCC-CTCCTGGTA-TCACACCCTGGAGGGGTCCACTCCTCTTGGGCTGAGTCTGTAACTTGCCCCCAAGCAAGAGCATACAGcaagct----cacgcacgtggttgttggtgtgattcagttt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51392 146 + 138250 CTGG-GGGCctagggtagtctcctgactccccgctcctggtattcactccctggaa-ggtcccctcctcttcggctgagcctataacttgctccctagcaagagcatacagcaagct----cacacgcatagttgttggtgggattctgttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127154 82 - 122678785 I a score=11632.000000 s hg38.chr19_GL949753v2_alt 754954 13 + 796479 ctccagattgtct s panTro4.chr19 59954892 13 + 63644993 ctccagattgtct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902741 13 + 60714840 ccctggcttctcc i ponAbe2.chr19 C 0 I 62 s nomLeu3.chr10 103378503 13 - 106955855 ctcccagctgtct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680846 6 + 64156825 ctcccg------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823096 6 + 59248254 ctcccg------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930826 13 + 51301725 CTCCCGGTTGTTG i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47633366 13 + 50890351 ctctcggttgttg i chlSab2.chr6 C 0 I 6 s calJac3.chr22_GL285922_random 51538 13 + 138250 ctcccagttgtta i calJac3.chr22_GL285922_random C 0 I 9 s canFam3.chr1 20127236 13 - 122678785 CTCCTGGCTGCCC i canFam3.chr1 I 82 C 0 a score=66460.000000 s hg38.chr19_GL949753v2_alt 754967 27 + 796479 ccattcctccctggcttctccacaggg s panTro4.chr19 59954905 27 + 63644993 ccattcctccctggcttctccacaggg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103378516 27 - 106955855 ccattcctccctggcttctctacaggg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680852 25 + 64156825 --gttcctccctggcttctccacaggg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823102 25 + 59248254 --gttcctccctggcttctccacaggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930845 27 + 51301725 CCGTTCCTCCCTGGCTTCTCCACAGGG i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47633385 27 + 50890351 ccgttcctccctggcttctccacaggg i chlSab2.chr6 I 6 C 0 s calJac3.chr22_GL285922_random 51560 27 + 138250 cagttcctccctggctactccacaggg i calJac3.chr22_GL285922_random I 9 C 0 s canFam3.chr1 20127249 23 - 122678785 ---CAGCTCTCGGGCC-CCCCAGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56902754 62 + 60714840 I a score=231827.000000 s hg38.chr19_GL949753v2_alt 754994 98 + 796479 ccgctcaccatggcagccggctccatcaccaccagccagcgagagggcaagacaagagggctgac--gagggacgctaccatcacagaggtc----agttttgt s panTro4.chr19 59954932 100 + 63644993 cggctcaccatggcagccggctccatcaccgccagccagcgagagggcaagacgagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902816 100 + 60714840 ccgctcgccatggcagccggctccatcaccgccggccagcgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agttttgt i ponAbe2.chr19 I 62 C 0 s nomLeu3.chr10 103378543 100 - 106955855 ccgctcaccatggcagccgactccatcaccgccagccagtgagagggcaagacaagagggctgacaagagggacgctaccatcacagaggtc----agtttcgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680877 99 + 64156825 ccactcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatcacagaggtc----ggttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823127 98 + 59248254 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agagggctggcaggagggatgctaccatc-cagaggtc----ggttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930872 83 + 51301725 CCACTCACCATGACAGCTGGCTCCACCACA----------------GCAAGAC-AGAGGGCTGGCAGGAGGGATGCTACCACCACAGAGGTG----GGTTTTGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633412 99 + 50890351 ccgctcaccatgacagctggctccaccacagccagccagcgagagggcaagac-agacggctggcaggagggatgctcccatcacagaggtc----ggttttgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 51587 101 + 138250 ccgcccaccatggcagctagctctatcacagccagccatccagcaggcaagac-agagggcTGGCAG--GGAGTTATAGCATCACAGAGCTCAGGTGGttttgt i calJac3.chr22_GL285922_random C 0 I 362 s canFam3.chr1 20127272 59 - 122678785 ----------TGGCTCACAGCACTATTGCAAC-----------AAGGCAGTAC-------------------ATGCTAGCAGTACAGATGCCCGGCAgt----- i canFam3.chr1 C 0 C 0 a score=127738.000000 s hg38.chr19_GL949753v2_alt 755092 57 + 796479 aacctaaccacaagacta-acctactgtcacttctgccctatcctact-gctagaagcc s panTro4.chr19 59955032 57 + 63644993 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902916 57 + 60714840 aacctaaccacaagacta-acctaccgtcacctctgccctatcctact-gctagaagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378643 49 - 106955855 a--------acaagacta-acctaccgtcacctctgccctaccctact-gctagaagcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60680976 53 + 64156825 aacctaaccacaagacta-acc----gtcacctctgccctatcctact-gctagaaacc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823225 57 + 59248254 agcctaaccgcaagacta-accaactgtcacctctgccccatcctact-gctagaaacc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47930955 57 + 51301725 AGCCTAACCACAAGACTA-ACCAACTATCACCTCTGCCCTATCCTACT-GCTAGAAACC i papAnu2.chr19 C 0 I 310 s chlSab2.chr6 47633511 57 + 50890351 aacctaaccacaagacta-accagctgtcacctctgccctatcctacg-gctagaaact i chlSab2.chr6 C 0 I 294 s canFam3.chr1 20127331 59 - 122678785 aacctaatcccagaatcagacattccgtcagcttcactctgttcttttcactggaagtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=10312.000000 s hg38.chr19_GL949753v2_alt 755149 4 + 796479 agtc s panTro4.chr19 59955089 4 + 63644993 agtc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902973 4 + 60714840 agtc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378692 4 - 106955855 cgtc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681029 4 + 64156825 agtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55823282 4 + 59248254 agtc i macFas5.chr19 C 0 I 305 s papAnu2.chr19 47931322 4 + 51301725 agtc i papAnu2.chr19 I 310 C 0 s chlSab2.chr6 47633862 4 + 50890351 agtc i chlSab2.chr6 I 294 C 0 s canFam3.chr1 20127390 4 - 122678785 agtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=13528.000000 s hg38.chr19_GL949753v2_alt 755153 5 + 796479 gctac s panTro4.chr19 59955093 5 + 63644993 gctac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902977 5 + 60714840 gctac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378696 5 - 106955855 gctac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681033 5 + 64156825 gctaC i rheMac3.chr19 C 0 I 539 s macFas5.chr19 55823591 5 + 59248254 gctac i macFas5.chr19 I 305 C 0 s papAnu2.chr19 47931326 5 + 51301725 gcTAC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633866 5 + 50890351 gctac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127394 5 - 122678785 gttgg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=233294.000000 s hg38.chr19_GL949753v2_alt 755158 118 + 796479 atctcccccacactc--------------------aaagggaggtggtcgcacCGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA s panTro4.chr19 59955098 118 + 63644993 atctcccccacactc--------------------aaagggaggtggtcgcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGACTCAGGTCATCCCAAACACACCCTCTAGCCATT------TGGTGTGGCATCGGAAAGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56902982 118 + 60714840 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TAGTATGGCATTGGAAAGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378701 118 - 106955855 atctcccccacactc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAACACACCCTCCAGCCATT------TGGTATGGCATCGGAAAGAAAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823596 117 + 59248254 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--GTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGGCATCAGAAAGAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931331 117 + 51301725 ATCT-CCCCACAGTC--------------------AAAGGGAGGTGGTCTCACTGTGGGGTCCA--CTGGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCCGTT------GGGTATGgcatcaaaaagaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633871 117 + 50890351 atct-ccccacagtc--------------------aaagggaggtggtctcacTGTGGGGTCCA--CTAGAAGTTGCCTACCAGAGTCAGGTCATCCCAAATACACCCTCCAGCTGTT------GGGTATGGCATCAGAAAGAAAA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20127399 144 - 122678785 gtcctgcccacagttggaggtcagaaggcatggagagggggaggtgggatcgt--tgggctccaggctggaaggtgcccaccCGAGTCTGTTCATCCCAAACATATCCTTTGGCTGTTGTGGTCTGATGTGGTAGCAAAAAGAAAA i canFam3.chr1 C 0 I 307 e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=260824.000000 s hg38.chr19_GL949753v2_alt 755276 151 + 796479 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaaatgttatgttgccacctctacaaataattagccaagtgtggt s panTro4.chr19 59955216 144 + 63644993 CTAAggccaggtacggtggctcatgcctgtaatcccaacaatttgggaggccatggcggaagggtcacttgagcccagaagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903100 144 + 60714840 CTAAggccaggtatggtggctcatgcctgtaatcccaacaatttgggaggccatggcagaagggtcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378819 144 - 106955855 CTAAggccaggtatggtggctcacgcctgtaatcctaacaatttgggaggccatggtggaagggtcacttgggcccaggagtttgagaccagcctgggcaacacagcaa-------gaccccacctctacaaataattagccaagtgtggt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55823713 144 + 59248254 CGACggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccgtggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacgaataattagccaagtgtggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931448 144 + 51301725 ctacggccaggtacagtggctcatacctgtaatcccaacaatttgggaggccatggcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47633988 143 + 50890351 CTACggccaggtacagtggctcatacctgtaatcccaacactttgggaggccat-gcagaaggatcacttgagcccaggagtttgagaccagcctgggcaacatagcaa-------gaccccacctctacaaataattagccaagtgtggt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I e rheMac3.chr19 60681038 539 + 64156825 I a score=914406.000000 s hg38.chr19_GL949753v2_alt 755427 390 + 796479 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcac---aggtcgaggttgtagtgagctgtgacggcactgcactccagccttggcaacacagtaagacctcgtctctaaaaaagcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagataag-cctggccaacatggtgatacc--gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga s panTro4.chr19 59955360 391 + 63644993 ggcgtgcacctgtagtcccagatactcaggaggctgaggcaggagcatcac---aggtcgaggttgtagtgagctgtgacggcactgcactacagccctggcaacacagtaagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagatcag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacatgggagac-acaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagcga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903244 393 + 60714840 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggtcgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtcgctaaaaa-gcaaaaaGggccaggtgcactggctcacacctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccag-cctggccaatatggtgataccc-gtctttaattagccaggtgtggtggtgggcgcctgtaatcccagctactcgggaggctgaggcatgagaatcgcttgaacctgggagac-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103378963 395 - 106955855 ggcatgcacctgtagtcccagatactcaggaggctgaggcaggagaatcacaggaggttgaggttgtagtgagctgtgatggcactgcactccagccttggcaacacagtgagaccttgtctctaaaaa-gcaaaaaGggccaggtgcactggctcacacctgtcatcccagcactttgggaggccaagacgggtagatcacctgaggtcaggagttcaagaccag-cctggccaacatggtgataccctgtctttaattagccaggtgtggtggtgggcacctgtaatcccagctactcaggaggctgaggcatgagaatcgcttgaacctgggagacaagaggttgcagtgagccaagatcatgccattgcactccatcctggacaacagagcga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681577 393 + 64156825 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggctcacacctgtaattcctgtactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcccagtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggcggaggcatgagaatcgcttaaacccgggaggc-agaggttgcagcgagccgagatcatgccattgcactccagcctgggcaacagggtga i rheMac3.chr19 I 539 C 0 s macFas5.chr19 55823857 393 + 59248254 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctggctgcactggctcacacctgtaattcctgtactttgggaggccaagatgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgccccgtcttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagggtga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931592 393 + 51301725 ggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaagggctgggtgcactggctcacacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccaggcctggccaacatggtgatgcCCCGTCttcaattagccaggtgtggtggaagacgcctgtaatcccagctactcgagaggctgaggcatgagaatcgcttgaacccgggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634131 382 + 50890351 ggtgtgcacctgtagtcccagctactcaggaggctgagacaggagaatcacaggaggtcgaggctgtagtgagctgtgatggcactgcactccagccttagca--agagtgagaccttgtctctaaaaa-gcaaaaaGggctgggtgcactggct--cacctgtaattcctgcactttgggaggccaagacgggtggatcacctgaggtcaggagttcaagaccagacctggccaacatggtgatgccccgtctttaattagccaggtgtggtggtgcacgcctgtcattccagctattcgagaggctgaggcatgag---------aacccaggaggc-agaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacagagcga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 51688 362 + 138250 I a score=684584.000000 s hg38.chr19_GL949753v2_alt 755817 254 + 796479 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTTCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA s panTro4.chr19 59955751 253 + 63644993 gactAggtggctgttctgtgtactgtgggatattgagtagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttctatctcgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctGATGTCTATCCAGTTTCTAACA--GCAGTCTTGTAAGATGCCCGGACTTAAAACGGTTACTGCCTGTGAAACAGGTGAAAGGGGCTTTCATCTCTAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903637 245 + 60714840 gactgggtggctgttctgtgtgctgtaggatattgagcagcatccctggcctccccaGCATCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctcctttggttctgcacctaagctaagagccgcttcatctcagcctgatcTTTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCT---------GTGAAAGGGGCTTTCATCTCTAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379358 247 - 106955855 gactgggtggctgttctgtgtactgcaggatactgagcagtatccctggcctgcccactaTCTCAAATATGAA------aacatgttttctatcttgattactgagcttttcggtgcctccttcggttctgcacctaagctaagagccccttcatctcaccctgatctcTATCCAGTTTCTAACACAGCAGTCTTGTAAGATGCCCGGACTTAAA-CGGTTATTGCCTGTGAA-------AAAGGGGCTTTCATCTCTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60681970 253 + 64156825 gactgggtggctattctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55824250 253 + 59248254 gactgggtggctgttctgcgtactgtaggatattgagcagcatccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttcggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCGGACTGAAA-CGGTTATGGCCTGTGAAAGGGGTGAAGGGGGCTTTCATCTCTAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47931985 253 + 51301725 gactgggTGGCTGTTTTGCATACTGTAGGAtattgagcagcatccctggcctccccAGTATCTCaaatatgaa------aacatgttttatatCTCGATTACTGAGCTTTTCAGTGTCTCCTTCGGTTCTGCACCTAAGCTGAGAGCCCCTTCCTCTCACCCTGATCTCTACCCAGTTTCTAACA-AGCCGTCTTGTAAGATGCCCAGACTGAAA-CAGTTATGGCCTGTGAAAGGGGTGAAGGGAGCTTTCATCTCTAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47634513 252 + 50890351 gattgggtggctgttctgtgtactgtaggatatccagcag-atccctggcctccccagtaTCTCAAATATGAA------aacatgttttatatctcgattactgagcttttccgtgtctccttaggttctgcacctaagctgagagccccttcctctcaccctgatctctacccAGTTTCTAACA-AGCCGTCTTGCAAGATGCCCGGACTTAAA-TGGTTATGGCCTGTGAAAGGGGTGAAGGGGGTTTTCATCTCTAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52050 259 + 138250 GGCTGAGCGGTAGTTCTGTGTATTGTAGGCTACTGAGCAGCTTCCTTGGCCTCCCCAATATCCCAAAGAAAAATACTGGAAAACTCTTTGTATCCCAATGACTGAGCTTTTTAGTGCCTTCTTCAGTTCTGCACCTAAGCCCAGCGCCCCTTCAGCTCACCC-GACCTCCACCCAGTTTCTAACACATCAGTCTTGTAAGAGCCCCAGACTTAAG-TGACTATCGCCTGTGAAAGGGGTAAGAGGAGTTTTCATCTCTAAA i calJac3.chr22_GL285922_random I 362 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=1911.000000 s hg38.chr19_GL949753v2_alt 756071 1 + 796479 A s panTro4.chr19 59956004 1 + 63644993 A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903882 1 + 60714840 A i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60682223 1 + 64156825 A i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55824503 1 + 59248254 A i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47932238 1 + 51301725 A i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47634765 1 + 50890351 A i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C a score=-1107.000000 s hg38.chr19_GL949753v2_alt 756072 1 + 796479 -A s panTro4.chr19 59956005 1 + 63644993 -A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903883 1 + 60714840 -A i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47634766 1 + 50890351 T- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=2739.000000 s hg38.chr19_GL949753v2_alt 756073 12 + 796479 GTCGGAACtttt s panTro4.chr19 59956006 12 + 63644993 GTCGGAACtctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903884 12 + 60714840 GTCTGAACTTTT i ponAbe2.chr19 C 0 I 13 e canFam3.chr1 20127543 307 - 122678785 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=22275.000000 s hg38.chr19_GL949753v2_alt 756085 249 + 796479 ttttttttttgagacggaatcttgctctgtcacccaggctggagggcagtggcatgatctcggctcactgcaatctccgcctcccagcttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatgcccagctaattttttgtatttttttagtagaaacagggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc s panTro4.chr19 59956018 249 + 63644993 ttttttgtttgagacggaatctcgctctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccatgcctagctaattttttgtatttttttagtagaaacggggtttcattgtgttagccaggatggtctcgatctcctgacctcgtgatccaccgcgcccggcc i panTro4.chr19 C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e ponAbe2.chr19 56903896 13 + 60714840 I e calJac3.chr22_GL285922_random 52309 0 + 138250 C e nomLeu3.chr10 103379605 0 - 106955855 C e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=1820.000000 s hg38.chr19_GL949753v2_alt 756334 2 + 796479 AA s panTro4.chr19 59956267 2 + 63644993 AA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903909 2 + 60714840 AA i ponAbe2.chr19 I 13 C 0 s nomLeu3.chr10 103379605 2 - 106955855 AA i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 52309 2 + 138250 AA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I e chlSab2.chr6 47634767 0 + 50890351 C e papAnu2.chr19 47932239 1 + 51301725 I e macFas5.chr19 55824504 1 + 59248254 I e rheMac3.chr19 60682224 1 + 64156825 I a score=705182.000000 s hg38.chr19_GL949753v2_alt 756336 282 + 796479 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTTTCTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG s panTro4.chr19 59956269 281 + 63644993 GTCTGAACTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAATAAAGCCATGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGCACAGAGG-AAAAATAAAATCTACGACTCGGGTACATTTTCTTCTTTTTTTTT-CTTTTAAATGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGTCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56903911 268 + 60714840 GTCTGAACTTTTGCGTGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTGAAAGGAGTAAATCCATGACTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGAGGAAAAAATAAAACCTACGACTCGGGCACATTT---------------TTTTTTAATGAGCAAGTTTGAGAGTCTGCGGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCGGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379607 274 - 106955855 GTCTGACCTTTTGCATGGCCTGTTGCCCTGGTGATAAACTGATGCCTTGT-TTCCTAAAAGGAGTAAATCCATGGCTTGCCTTTGTTCAGCTCATGGGCATTCACCCATACACAGACG-AAAAACAAAACCTACGACTCGGGAACATTT-------TTTTTTT-TTTTTAAATCAGCAAATTTGAGAGTCTGCGGTTTAGATTACCGTGACAAGTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682225 253 + 64156825 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAG--TGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55824505 255 + 59248254 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCA-GGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACATTTTC-----------T-TTTTTTAGTGAGCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGACAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47932240 263 + 51301725 GTCTGAACTTCTGCATGGCCTGTTGCCCTGGTGATAAA----------------CTAAAAGGAAGAAATCCAGGAGTTGCCTTTGTTCAGCTCATGGGCATTCACCCATGcacagaggaaaaagtaaaacctACGACTcaagtacattttc----ttttcttt-ttttttagtgagCAAGTTTGAGAGTCTGCAGTTTGGACTACCATGAGAATTGATAGGAAGGTGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCAAG i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47634767 279 + 50890351 GTCTGAACTTCTGCATGGCCTGCTGCCCCGGTGATAAACTGAGGTCTTGT-TTCCTAAAAGGAAGAAATCCATGAGTTGCCTTTGTTCAGCTGGTGGGCATTCACCCATGCACAGAGGAAAAAGTAAAACCTACGACTCAAGTACCttttc---ttttttttt-ttttttAGTGAGCAGGTTTGAGAGTCTGCAGTTTGGACTACTATGAGAATTGATAGGAAGGGGGGAGCCCCAGGCAATCCCAGGTCCTGTAGCAGCAGCTGGTGGGGTTCCCACTCCATG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52311 262 + 138250 GTCTGAACTTCTGCATGGCCTGGTGCCCTGGTGATAACCTGATGTCTTGTGTCCCTAAAAGGAATAAATCCATGAGTTGTCTTTGTTCAGCGCATGGACGTTCCCGCGTACACAGAGGAAAAAATAAAACCTACGACTCTGCTGCATTT-------------T-TTTTTAAATGAGCAAGTTTCAGAGTCTGCAGTTTGGA------TGAGAACTGACAGGAAGGCGGGAGCCCCAGGCACTCCCAGGTCCTT--GCAGCAGCTGGTGGAGTTCCCAGTCCACT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20127543 307 - 122678785 I a score=261570.000000 s hg38.chr19_GL949753v2_alt 756618 94 + 796479 CCGTGCAGAGCCTGAACTCAGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-CGGCACAGCCA------- s panTro4.chr19 59956550 87 + 63644993 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCTGGGCTCTGGCACAGGAAGCC-------AACACCCC-TGGCACAGCCA------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904179 94 + 60714840 CCGTGCAGAGCCTGAACTTGGGATGACACCTGCACCTGCTCTCTGGCCAGACTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379881 94 - 106955855 CCGTGCAGAGCCTGAACTCGGGATGACCCCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCGCAGCAAACACCCC-TAGCAAGGGCT------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682478 94 + 64156825 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i rheMac3.chr19 C 0 I 31 s macFas5.chr19 55824760 94 + 59248254 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCCGGGCTCTGGCACAGGAAGCCCTCAACAAACGCCCC-TGGCAAGGGCT------- i macFas5.chr19 C 0 I 11 s papAnu2.chr19 47932503 94 + 51301725 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTTTCTGGCCTGGCTCTGGCACAGGAAGCCCTCAGCAAACGCCCC-TGGCAAGGGCT------- i papAnu2.chr19 C 0 I 11 s chlSab2.chr6 47635046 93 + 50890351 CCGTGCAGAGCCTGAACTCGGGATGACACCTGCACCTGCTCTCTGGCC-GGCTCTGGCACAGGAAGCCCTCAGCAAACACCCC-TGGCAAGGGCT------- i chlSab2.chr6 C 0 I 11 s calJac3.chr22_GL285922_random 52573 87 + 138250 CCAGGCAGAGCTTGACCTC-GGATGA------CACGTGCTCTCTGGCCGGGATCTGGCACAGGAAGCCCTCAGCAAGCACCCC-TGGCAAGGGCT------- i calJac3.chr22_GL285922_random C 0 I 11 s canFam3.chr1 20127850 89 - 122678785 CTGTGC-GGGCCTGTCCTCAGGGGTGTTCCGGCAGCT------CGGCCAGGGTATGGCACATGTA------AGTGAACATTCAGCAGCAAGGAACGCACAGC i canFam3.chr1 I 307 C 0 a score=11408.000000 s hg38.chr19_GL949753v2_alt 756712 18 + 796479 ------TGCCATAGCCA-----------GACAACA s panTro4.chr19 59956637 18 + 63644993 ------TGCCATAGCCA-----------GACAACA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904273 18 + 60714840 ------GTGCACAGCCA-----------GACAACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103379975 29 - 106955855 ------GTGCACAGCCAGACAACAGCCGGACAACA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55824865 16 + 59248254 --------CAGTGAACA-----------GACAACA i macFas5.chr19 I 11 C 0 s papAnu2.chr19 47932608 16 + 51301725 --------CAGTGAACA-----------GACAACA i papAnu2.chr19 I 11 C 0 s chlSab2.chr6 47635150 16 + 50890351 --------CGGTGAACA-----------GGCAACA i chlSab2.chr6 I 11 C 0 s calJac3.chr22_GL285922_random 52671 14 + 138250 ----------ACGGCCA-----------GACAACA i calJac3.chr22_GL285922_random I 11 C 0 s canFam3.chr1 20127939 24 - 122678785 TGCCACTGATCCAGCCA-----------GGCGACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60682572 31 + 64156825 I a score=999757.000000 s hg38.chr19_GL949753v2_alt 756730 355 + 796479 GCTCG--CTGTACCACaccatcatgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCCCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGAACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG s panTro4.chr19 59956655 355 + 63644993 GCTCG--ccgcaccacaccatcgcgggagacagc--agtta-ttctgagcatctcactgctgaagaaaccaaggctc-agagag--gacca-tgcatgcacaaggtcccacagGGACCCAAGAATCC-ACCAAGTGT--CAGACAACTTGCCCATGCTCTTCACGGAGCACCTTGGAACCCTCCCCGACAGGCACCGCTGGCTCTCCTGACGTGGCC-TGCAAGTGCACGGAGCTCCTTCCT-CCTCGGCCATTCCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGGCTGAACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904291 348 + 60714840 GCTCA--CTTCACCATACCATCGCGGGAGACAGC--AGTTA-TTCTGAGCACCTCACTGCT---GAAACCAAGGCTC-AGACAG--GACCA-TGCATACACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCATGCTCTTCACCGAGCACCTTGGCGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGCGCACGGAGCCCCTTCCT-CCTCGGCCGTTCGCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCTCTCCCCTGCTGGCAGCAGAGCAGACGGGACCAGCCA--GAGCC----CGGGGCAGTGCTCACCTGCAGGGCAGTCCACTGCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380004 347 - 106955855 GCTCA--CCGCACCGCACCATCACGGGAGACAGC--AGTTA-CTCTGAGCACCCCACCGCT---GAAACCAAGGCTC-AGAGAG--GACCA-CGCATGCACAAGGTCCCAGAGGGACCCAAGAATCC-----AGTGT--CAGACAACTTGCCCGTGCTCTTCACGCAGCACCTTGAAGCCCTCCCCCACCGGCACCACCGGCTCTCCTGACATGGCC-CACAAGCGCATGGAGCCCCTGCTT-CCTCGGCCATTCCCGGTTTACATTCCCAGGGGAAGCATCAGATGGCC--CCTCT-CCCTGCTGGCAGCAGAGCAGATGGGACCAGCCA--GAGCC----CAGGGCAGTGCTCACCTGCAGGCCAGTCCACTGCG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682603 349 + 64156825 GCTCG--CTGCACcacaccatcacgggagacagc--ggtta-ttctgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtacccaagaatcc----gagtgt------cagcttgcccatgctctttgcagagcaccttggagccctccCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i rheMac3.chr19 I 31 C 0 s macFas5.chr19 55824881 353 + 59248254 GCTCA--CCGCACCACACCGTCACGGGAGACAGC--GGtta-ttccgagcacctcaccgctgaagaaaccaaggctc-agagaa--gacccctgcatgcacaaggtcccacgggtaCCCAAGAATCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCTTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTGCACGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCGTCAGATGGCC--CCGCTCCCCTGCTGGCAGCAGAGCACATGGGACCAGCCG--GAGCC----CAGGGCAGTGGTCACCCGCGGGCCAGTCCACTGCG i macFas5.chr19 C 0 I 142 s papAnu2.chr19 47932624 345 + 51301725 GCTCG--CCGCACCACACTGTCACGGGAGACAGC--GGTTA-TTCTGAAGA---AACCgttgaagaaaccaaggctc-agagaa--gaccCTTGTATGCACAAGGTCCCACGGGTACCCAAGAACCC----GAGTGT--CAGACAGCTTGCCCATGCTCTTTGCGGAGCACCCTGGAGCCCTCCCCCACAGGCACCGCTGGCTCTCCTGACATGGCC-CACAAGTACATGGAGCCTGTGCCT-CCTCGGCCATTGCCAGTTTAGATTCCCAGGGGAAGCATCAGATGGCC--CCGCTCCCGTGCTGGCAGCAGAGCACATGGGATCAGCCT--GAGCC---------CAGTGGTCACCCGCAGGCCAGTCCACTGCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635166 354 + 50890351 GCTCG--CCGCACCACACCGTCACGGGAGACAGC--GGTTATTTCTGAGCACCCCACCGCTGAAGAAACCAAGGCTC-AGAGAA--GACCCTTGCATGCACAAGGTCCCACAGGTACCCCAGAATCC----GAGTGT--CAGACAGCCTGCCCATGTTCTTTGCAGAGCACCCTGGAGCCCTCCCCCACAGGCACTGCTGGCTCTCCTGACATGGCC-CACAAGTACACGGAGCCTGTTCCT-TCTCAGCCATTGCCAGTTTAGATTCGCAGGGGAAGCATCAGATGGCC--CCACTCCCCTGCTGGCAGCGGAGCACATGGGACCAGCCA--GAGCC----CAGGGCAGTGGTCACCTGCAGGCCAGTCTACTGCG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 52685 356 + 138250 GCGTG--CCACACCACGCCATCACAGGAGGGAGC--AGCTG-TTCTGAGCACCTCACCGCTGGAGAAACCAAGGCTCAAGAGAG--GACCA-TGCGTGTACAACGTCCCACAGGGACCCAGGAATCC-ACCGAGTGT--CAGACACCCTGCCCATGCTCTTCACAGAGCACCTTGGAGCCCACCCCCATGGGCACCGCTGGCTCTCCTGACATCGCC-CACAAGCGCACAGAGACTGTTCCT-CCTCAGCCGTACCCAGTTTAGATTCCCAGAGGAAGTATCAGATGGCC--CTGCTCCCCTGCTGGCAGCAGAGCACACGGGACCAGCCA--GAGCC----CAGGGCAGTGCCCACCTGCAGGCCAGTCCACCGCG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20127963 353 - 122678785 Actcattcatcaccatgctgtcctgtgaggtagtcaggtta-ttctgcaca-ttcacagtgggagaaaccgaggctc-agagaggcgactg-agggtgtgcacggtcccacagggaaccatgaacctgactgggtctggcagacaactttccca------------atggccaCACAGGTCTGCACCGTGGCCACCAGTGGCCCTCCTGACACGGCCACAC-------CGGAGCGGCCTCCTCCCTCAGCGATTCCCAGTTC-CACGCTCAAGGCAGGTGTCTGACGGCCAGATGCGCACCTGCCACTGCCTGAGAAGAAAAGGGCAGCTACTGATCCCTACCAGCGTGACGTGGGCATGGCAACCAGCGTTCTTTG i canFam3.chr1 C 0 C 0 a score=17712.000000 s hg38.chr19_GL949753v2_alt 757085 5 + 796479 GCCAG s panTro4.chr19 59957010 5 + 63644993 GCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904639 5 + 60714840 GCCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380351 5 - 106955855 GCCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60682952 5 + 64156825 GCCAG i rheMac3.chr19 C 0 I 145 s macFas5.chr19 55825376 5 + 59248254 GCCAG i macFas5.chr19 I 142 C 0 s papAnu2.chr19 47932969 5 + 51301725 GCCAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635520 5 + 50890351 GCCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53041 5 + 138250 ACCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128316 5 - 122678785 GGCAA i canFam3.chr1 C 0 C 0 a score=108345.000000 s hg38.chr19_GL949753v2_alt 757090 36 + 796479 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC s panTro4.chr19 59957015 36 + 63644993 CACCGCCCCCTAGAACCTACTGCGGGCATGGCGGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904644 36 + 60714840 CACCGCCCCGTAGAGGACGCTGCTGGCTTGGCGGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380356 36 - 106955855 CACCGCCCCCTAGAGGACGCTGCGGGCATGGCGGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683102 36 + 64156825 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i rheMac3.chr19 I 145 C 0 s macFas5.chr19 55825381 36 + 59248254 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47932974 36 + 51301725 CACCGCCCCCTAGAGGATGCTGCGGGCATGGGGGCC i papAnu2.chr19 C 0 I 467 s chlSab2.chr6 47635525 36 + 50890351 CACCGCCCCCTAGAGGAAGCTGCGTGCATGGCGGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53046 36 + 138250 CAGTGCCCCCTAGAGGATGCTTCGGTTGTGGCAGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128321 36 - 122678785 TACTGCCTCCTAGAGGACCCTCTGGGCATGACAGCA i canFam3.chr1 C 0 C 0 a score=3235.000000 s hg38.chr19_GL949753v2_alt 757126 11 + 796479 GC------------------------------------------------------------------------CAGTCCTGG s panTro4.chr19 59957051 11 + 63644993 GC------------------------------------------------------------------------CAGTCCTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904680 83 + 60714840 GCCAGTCCTGGGTCTCCCAGCTCAGGTGGTGCCAGCGCCACCCCCTAGAGGAAGCTACGGGCATGGCGGCCAGGCAGTCCTCG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380392 11 - 106955855 GC------------------------------------------------------------------------CAGTCTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683138 11 + 64156825 ------------------------------------------------------------------------GGCAGTCTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825417 11 + 59248254 ------------------------------------------------------------------------GGCAGTCTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933477 11 + 51301725 ------------------------------------------------------------------------GGCAGTCCTGG i papAnu2.chr19 I 467 C 0 s chlSab2.chr6 47635561 11 + 50890351 ------------------------------------------------------------------------GGCAGTCCTGG i chlSab2.chr6 C 0 I 424 s calJac3.chr22_GL285922_random 53082 11 + 138250 ------------------------------------------------------------------------GGCAATCCTGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128357 10 - 122678785 -------------------------------------------------------------------------GTAGTCTTGA i canFam3.chr1 C 0 C 0 a score=26820.000000 s hg38.chr19_GL949753v2_alt 757137 7 + 796479 GTCTCCC s panTro4.chr19 59957062 7 + 63644993 GTCTCCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904763 7 + 60714840 GTCTCCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380403 7 - 106955855 GTCTCCC i nomLeu3.chr10 C 0 I 285 s rheMac3.chr19 60683149 7 + 64156825 GTCTCCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55825428 7 + 59248254 GTCTCCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47933488 7 + 51301725 GTCTCCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47635996 7 + 50890351 GTCTCCC i chlSab2.chr6 I 424 C 0 s calJac3.chr22_GL285922_random 53093 7 + 138250 GTCTCCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128367 7 - 122678785 GGCTCGC i canFam3.chr1 C 0 C 0 a score=1320712.000000 s hg38.chr19_GL949753v2_alt 757144 372 + 796479 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCGCTCAGAGAGA s panTro4.chr19 59957069 372 + 63644993 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCGGACAGCTGTCCTCGGTCTGGAGGCGCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCTGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGCCCACAGGGCATTTAGTCCACACTCGCTCAGAGAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56904770 372 + 60714840 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCAGGCATGGCGGACAGCTGTCCTCGGTCTTGCGGCTCCATCCCG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAATACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATTAGCCCACAGGGCATTCAGTCCACACTCGCTCAGAGAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103380695 372 - 106955855 --------------GGCTCAGGTAGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGAAAGCTGTCCTCAGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGGAGTGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCACTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCGGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCCGAAACATCTGCCAGTTCCTCCGCCACGGCCAGGTATGTGCTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGCCCTGCAATCAGCGTACAGGGCATTCAGTCCACACTCGCTCAGAGAGA i nomLeu3.chr10 I 285 C 0 s rheMac3.chr19 60683156 372 + 64156825 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCAGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGCTCAGTCCACACACGCTCAGAGAAG i rheMac3.chr19 C 0 I 41 s macFas5.chr19 55825435 372 + 59248254 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGTGGCCCTCGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTGCCTCACAGA---------GGGAGC---------CTCTAAGCCTACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCACCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCCGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGCAGCCAGATGATGGGCCCTGCAATCAGCCCACAGGGCGTTCAGTCCACACACGCTCAGAGAAG i macFas5.chr19 C 0 I 41 s papAnu2.chr19 47933495 370 + 51301725 --------------GGCTCAGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCGGCCCTCGGTCTTGTGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAAGTTATCTGGGAAGGGGCTGCTCCCTCACCGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACATCTGCCAGTTCCTCTGCCACGGCCAGGTATGTGCTGGGTTGGGCGGCCAGCTCGGGGCCCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACGCTCAGAGA-- i papAnu2.chr19 C 0 I 220 s chlSab2.chr6 47636003 370 + 50890351 --------------GGCTCTGGTGGTGCC--------------------------------------------AGGAAGCTGCGGGCATGGCAGACAGCTGCCCTTGGTCTTGCGGCTCCATCCTG-------------------GCTTTCAAATCTGCTCCA-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGA---------GGGAGC---------CTCTAAGCCCACCAGGCGGGCGCTTTCAGCCCAAAGCCTCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCCGGGGCCTTCTGTTTGAGTCCATCGAAGTACTTTCCGGAAACGTCCGCCAGTTCCTCTGCCACAGCCAGGTATGTGCTGGGCTGGGCGGCCAGCTCGGGGCTCTTGACCAGAAGCCAGAAGATGGGCCCTGCAATCAGCGCACAGGGCACTCAGTCCACACACGCTCAGAGA-- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53100 394 + 138250 --------------GGCTCAGGTGGTGCC-----------------------------AACACCGCCCCCTAGAGGATGCTGTGGGTGTGGCGGACAGCGGTGCTCGGTCTCGTGGCTCCATCCTGGAGC-CTGTCTTCATCCTCGCTTTCAAATCTCCTTCC-GAGGTTATCTGGGAAGGGGCTGCTCCCTCACAGAGGACACATGGGACGC---------CTCCAAGCCCACCAGGCGCGCACTTTCAGCCCAAAGCCGCCGGGCCACCTCCTCATCCTCAGCCTCGGGGGCTGGGGCCTTCTGTTTGAGTCCATCAAAGTACTTTCCGGAAACATCCGCCAGTTCCTCCGCCACGGCCAGGTATGTACTGGGCTGGGCAGCCAGCTCGGGGCTCTTGACCAGCAGCCAGAAGATGGGTCCTGCAATCAGC----------------CCACACACACTCAGA---- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128374 459 - 122678785 ACAAACTACACTGCCACCTAGAGGGTGACGTGGGCATCTCGGTCAGCGTTCCGTGGGCAACACTGCCACCCAGAGGACGCTGCAGACAGAGCAGCCAGCTTGGGTTGGCCTTGCGGCTCCATCCTGGTACTCCGCCTCCCACGTGGTTTTCACACCTGCTCCCTGAGATTATTTAGGGAGGGGCTGCCCCCTCACTGA---------GGAAACACCTGACATCTCCAAGCCCACCAAGCGGGCACTTTCAGCCCAAAGCCTCTGGGCTACCTCTTCATCCTCAGCTTCCGGGGCTGGAGCCTTCTCTTTGAGTCCATCAAAGTACTTTCCAGAAACACCCTCCAATTCCTCTGCCACGGCCAGGTACGTGCTGGGCTGGGCTGCCAGCTGGGGGCTCTTGACCAACAGCCAGAAGATGGGCCCTGCAATCAGCCCACAGAGCATTCAGTCCACACACGTTCAGGGAGG i canFam3.chr1 C 0 C 0 a score=842802.000000 s hg38.chr19_GL949753v2_alt 757516 291 + 796479 --AGGAAGGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcttggtcagcccc-agtcctcaccctaccccatttctc------------ctt-taataac---at---cttattaaatgCACCTGGCACCAGCCTCAG s panTro4.chr19 59957441 303 + 63644993 --AGGAAGGAAGCCCCGCTCCCCGGTCAG----------------------GGAGCTCCGGGTCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctcccccaaggagccttcctggctttg-tccaggaaaatggaagctctcttcctcctggtcagtccc-agtcctcaccctaccCCATTTCTCcttaaataacatctt-aaataac---at---cttaTTAAATGCACCTGGCACCAGCCTCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905142 272 + 60714840 --AGGGAGGA-------------------------------------------AGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccttggcactgcccaggcaaatcccaccagac-cagggatcagaccaaaagctgcctaccccaaggagccttcctggctttg-tccaggaaaatggaagctctcctcctcctggtcagcccc-agtcctcatcctaccCCATTTCTC------------CTT-AAATAAC-TTAA---CTTATTAAATGCACCTGGCACCAGCCTCAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381067 283 - 106955855 --AGGGAGGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGccctcctctagccctttcccctt--ggctgcctccatctgcagttcccttccctggcactgcccaggcaaatcccaccggac-cagggatcagaccaaaagctgcctcccccaagaagccttcctggctttg-tccaggaaaatggaagctc---tcctcctggtcagcccc-agtcctcaccctaccCCATTTCTC------------CTT-AAATAAC-TTAT---CTTATTAAAT-------GCACCAGCCTCAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683569 287 + 64156825 --AGCGAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGccctcctccagccccttcccctt--ggctccctccatctgcagttcccttccctggcactgcccaggctaatccctccagac-cagggatcagaccagaaactgcctcccccaaggagccctcctggctttg-tccaggaaaatggaagctgtcctcctctt----agcccc-agtcctcaccctatcccatttctc------------ctt-aaataac---tt---cttattaaATGCACCTAGCACCAGCCTCAG i rheMac3.chr19 I 41 C 0 s macFas5.chr19 55825848 287 + 59248254 --AGCGAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAACTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTATCCCATTTCTC------------CTT-AAATAAC---TT---CTTATTAAATGCACCTAGCACCAGCCTCAG i macFas5.chr19 I 41 C 0 s papAnu2.chr19 47934085 284 + 51301725 --AGCAAGGAAGCCCCACTCCCCCGTCAG----------------------GGAGCTCCGGGCCC----------CTGGAGTCCCACAGagccctcctccagccccttcccCTT--GGCTCCCTCCATCTGCAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCTCCAGAC-CAGGGATCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCC-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAA---------CTTACTAAATGCACCTAGCACCAGCCTCag i papAnu2.chr19 I 220 C 0 s chlSab2.chr6 47636373 278 + 50890351 --AGTGAGGAAGCCCCACAACCCCGTCAA----------------------GGAGCTCCGGGCCC----------CTAGAGTCCCACAGAGCCCTCCTCCAGCCCCTTCCCTTT--GGCTGCCTCCATCTGTAGTTCCCTTCCCTGGCACTGCCCAGGCTAATCCCT-------------TCAGACCAGAAGCTGCCTCCCCCAAGGAGCCCTCCTGGCTTTG-TCCAGGAAAATGGAAGCTCTCCTCCTCTT----AGCCCT-AGTCCTCACCCTACCCCATTTCTC------------CTT-AAATAAC---TTACACTTATTAAATGCACCTAGCACCAGCCTCAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53494 270 + 138250 --AGTCAGGAAGCCCCACTCCCCCATCAG----------------------GGAGCTCCAGGCCC----------CTGGAGTCCCACAGAGCCCTCCTCCAGCCCCTTACCCTT--GGCT---CCCATCTGCAGTTCCCTTCCCTGGTACCGCCCTGGCAAATCCCTCCCGAC-CAGGGGTCACGCCAAAAGCTGCCT-CCCTAAGAAGCCTTCCTGGCTTTG-CCCGGGAAAATGAAAGCTCTCCTCCT--TGGTCAGCCCC-AGTATTCACCCTACCCCATTTCTC-------------------------------CT---TAAATGCACCTGGCACCAGCCTCAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20128833 324 - 122678785 AGGACATGAACACCCTACTCTCCCCCCAACACCCCCACCCCAGGGTTGCCTGGGGCCCAGAGGCCAGAGGTGACACTGCAGTCCCACACAGcccacctccaggcctgtgcctctgaggttccctccaccaggagctcctttccctggcactgcccagccaaatccctccagacatagagaccagcccaaatggggcctcttccagcaagcctccccagcttttccccaggcaaatggaggctc----------agtcatctctgagtccttaccctatcccaccttgc------------tttaaaatagctttta---tttattaaatgtctCTGGGGCCAGGCTCAG i canFam3.chr1 C 0 C 0 a score=26811.000000 s hg38.chr19_GL949753v2_alt 757807 17 + 796479 GTTAAGGA-----TCTTTTTTT s panTro4.chr19 59957744 18 + 63644993 GTTAAGGA----TTTTTTTTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905414 19 + 60714840 GTTAAGGA---TTTTTTTTTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381350 16 - 106955855 GTTAAGGA------TTTTTTCT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60683856 22 + 64156825 GTTAAGAAtttttttttttttt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826135 18 + 59248254 GTTAAGAA----TTTTTTTTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934369 21 + 51301725 gttaataa-ttttttttttttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636651 20 + 50890351 GTTAGGAA-TTTTTTTTTTTT- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53764 22 + 138250 GTTAATTTTTGTTTCTTTTTTT i calJac3.chr22_GL285922_random C 0 I 144 e canFam3.chr1 20129157 0 - 122678785 C a score=305729.000000 s hg38.chr19_GL949753v2_alt 757824 134 + 796479 ggccaggcgaggtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat s panTro4.chr19 59957762 134 + 63644993 ggccaggcgaggtggctcaggcctgtaatcccagcacttcgggaggccgaggtgggcggatcacctagggtcgggagttccagaccagcctggccgacatggtgaaaccccatttctactaaaaatacaaaaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905433 134 + 60714840 ggccaggcgaggtggctcaggcctgtaatctcagcacttcgggaggctgaggcgggcggataacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381366 134 - 106955855 ggccaggcgaggtggctcaggcctgcaattctaccactttgggaggccgaggcgggtggattacctggggtcgggagttccagaccagcctggccaacatggtgaaaccccatttctattaaaaatacaaaaat i nomLeu3.chr10 C 0 M 115 s rheMac3.chr19 60683878 134 + 64156825 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826153 134 + 59248254 ggccaggcgaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccaccctcgccaacatgatgataccccatttctactaaaaatacaaaact i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934390 133 + 51301725 ggccaggcaaggtggctcaggcctgtaatcacagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctact-aaaatacaaaatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636671 129 + 50890351 -----ggcgaggtggctcaggcctgtaatcccagcacattgggaggccgaggcaggcggatcgcctggggtcaggacttccagaccagcctggtcaacatgatgaaaccccatttctactaaaaatacaaaaat i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=80001.000000 s hg38.chr19_GL949753v2_alt 757958 50 + 796479 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg s panTro4.chr19 59957896 50 + 63644993 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905567 50 + 60714840 taact-gggtgtggtggcgggtgcctgtaatcccagctgctcgggaggctg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60684012 50 + 64156825 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggctg i rheMac3.chr19 C 0 I 597 s macFas5.chr19 55826287 49 + 59248254 tagcc-aggcatggtggtgggtgcctgtaatcccagctgcttgggaggct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934523 51 + 51301725 aagcctgggcgtggtggtgggtgcctgtaagcccagctgtttgggaggctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636800 50 + 50890351 tagct-gggcttggtggtgggtgcctgtaatcccagctgcttgggagcctg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M a score=105409.000000 s hg38.chr19_GL949753v2_alt 758008 106 + 796479 gggcaggagaatcccttgaacctgggaggcggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctcaaaaaaa s panTro4.chr19 59957946 102 + 63644993 gggcaggagaatcccttgaacctgggaggtggaggttgcagtgagctaagatcacaccattgcactccagcctgggtgacaatagcaagacttcgtctc----aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905617 99 + 60714840 gggcaggagaatcccttgaacttgggaggcagaggttgcagtgagctgagatcacactattgcactccagcctgggtgacaatagcaagactttgtctc------- i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826336 75 + 59248254 -------------------------------aaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934574 106 + 51301725 aggcaggagaatcccttgaacccaggaggcggaggttgcagtgagccaaggtcgcaccattgcactccagcctgggtgacaagagcaaaactccatctcaaaaaaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47636850 106 + 50890351 aggcaggagaatcccttgaacccaggaggcggaggttgcagcgagccaagatcgtgccattgcactccagcctgggtgacaagagcaaaattccatctcaaaaaaa i chlSab2.chr6 C 0 I 477 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e rheMac3.chr19 60684062 597 + 64156825 I a score=1018.000000 s hg38.chr19_GL949753v2_alt 758114 3 + 796479 aaa s panTro4.chr19 59958048 3 + 63644993 aaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905716 3 + 60714840 aaa i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826411 3 + 59248254 ata i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47934680 3 + 51301725 taa i papAnu2.chr19 C 0 I 400 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 758117 1 + 796479 a s panTro4.chr19 59958051 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905719 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55826414 1 + 59248254 a i macFas5.chr19 C 0 I 385 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e rheMac3.chr19 60684062 597 + 64156825 I a score=9658.000000 s hg38.chr19_GL949753v2_alt 758118 38 + 796479 aaaaaaaGggctgggcgtggtgactcacgcctgtaatc s panTro4.chr19 59958052 38 + 63644993 aaaaGGGGggctgggtgtggtgactcacgcctgtaatc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56905720 38 + 60714840 aaaaaaGGGGCTGGGTGTGATGACTCACGCCTGTAATC i ponAbe2.chr19 C 0 M 596 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=29844.000000 s hg38.chr19_GL949753v2_alt 758156 348 + 796479 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgac--gagcaaaactccgtctc--aaaaaaaaaaagaCAtttatttatttatttattgagacctggtgtcttgctctgtcacccaggctggagtgcagtggtgtgatctcagctcactgcaa s panTro4.chr19 59958090 344 + 63644993 ccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgtgtgaaaccctgtctcaactaaaaataaaaacttagctgggtgtggtggtgggcgcctgcaatctcagctactttgggaggctgagacaggagaatcacttgaaccgaggaggcagaggttggagtgagccaagattgtgccactgcactccagcctgggtgacaagagcaaaactccgtctcaaaaaaaaaaaaagacattta-------atttattgaaacctggtgtcttgctctgtca-ccaggctggagtgcagtggcgctatctcggctcactgcaa i panTro4.chr19 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e nomLeu3.chr10 103381500 115 - 106955855 M e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=1522.000000 s hg38.chr19_GL949753v2_alt 758504 7 + 796479 cctctgc s panTro4.chr19 59958434 7 + 63644993 cctctgc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381619 7 - 106955855 cttttgc i nomLeu3.chr10 M 115 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e papAnu2.chr19 47934683 400 + 51301725 I e macFas5.chr19 55826415 385 + 59248254 I e rheMac3.chr19 60684062 597 + 64156825 I a score=7006.000000 s hg38.chr19_GL949753v2_alt 758511 11 + 796479 ctcccgggttc s panTro4.chr19 59958441 11 + 63644993 ctccctggttc i panTro4.chr19 C 0 I 472 s nomLeu3.chr10 103381626 11 - 106955855 ctcccgggttc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826800 11 + 59248254 ctcccgacctc i macFas5.chr19 I 385 C 0 s papAnu2.chr19 47935083 11 + 51301725 ctcccgacctc i papAnu2.chr19 I 400 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I a score=20659.000000 s hg38.chr19_GL949753v2_alt 758522 65 + 796479 aagcgattctcctgcctcagcctcctgagtagctgggactacaggtgcacaccaccacacctggc s nomLeu3.chr10 103381637 65 - 106955855 aagagattctcctatctcagcttcctgcgtagctgggagttcaggtgcacgccaccacgcctggc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826811 65 + 59248254 aggtgatctgcccgccttggcctcccaaagtgctgagattacagatgtgagccatcccgcccagc i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47935094 65 + 51301725 aggtgatctgcccgcctcggcctcccaaagtgctgagattacagatgtgagccatcacgcccagc i papAnu2.chr19 C 0 I 2 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e chlSab2.chr6 47636956 477 + 50890351 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=18522.000000 s hg38.chr19_GL949753v2_alt 758587 25 + 796479 taatttttgtatttttagtagagac s nomLeu3.chr10 103381702 25 - 106955855 taatttttgtatttttagtagagac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826878 25 + 59248254 taatttttgtatttttaatagagat i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47935161 22 + 51301725 taatttttgta---ttaatagagat i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47637433 25 + 50890351 taatttttgtatttttaatagagat i chlSab2.chr6 I 477 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I e panTro4.chr19 59958452 472 + 63644993 I a score=4500.000000 s hg38.chr19_GL949753v2_alt 758612 3 + 796479 ggg s panTro4.chr19 59958924 3 + 63644993 ggg i panTro4.chr19 I 472 C 0 s nomLeu3.chr10 103381727 3 - 106955855 ggg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55826903 3 + 59248254 ggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935183 3 + 51301725 ggg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637458 3 + 50890351 ggg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I e rheMac3.chr19 60684062 597 + 64156825 I a score=104145.000000 s hg38.chr19_GL949753v2_alt 758615 61 + 796479 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcccaccaca s panTro4.chr19 59958927 61 + 63644993 gtttcaccatattggtcaggctagtctcaaactcctgacctcaggtgatccaactgcctct i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103381730 61 - 106955855 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcccaccaca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684659 61 + 64156825 gtttccccatggtggccaggctggtctcgaactcctgacctgaggtaatctgcctgccaca i rheMac3.chr19 I 597 C 0 s macFas5.chr19 55826906 61 + 59248254 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935186 61 + 51301725 gtttcaccatggtggccaggctggtctcgaactcctgacctgaggtaatccgcctgccaca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637461 61 + 50890351 gtttatccatggtggccaggctggtctcgaacccctgacctgaggtaatccgcctgccaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e ponAbe2.chr19 56905758 596 + 60714840 M e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=109965.000000 s hg38.chr19_GL949753v2_alt 758676 47 + 796479 gcctcccaaagtgctgggattacaggcgtgGCTATTAGCCTCGCCAA s panTro4.chr19 59958988 47 + 63644993 gcctcccaaagtgctgggattacaggcgtgGCTATTAGTCTCGCCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906354 47 + 60714840 GCCTCCCAAAGTCCTGGTATTACAGGCGTGGCTATTAGCCTCGCCAA i ponAbe2.chr19 M 596 C 0 s nomLeu3.chr10 103381791 47 - 106955855 gcctcccaaagtgcagggattacaggcgtgGCTATTAGCCTCGCCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684720 47 + 64156825 gcctcccacagtgctgggattacaggcatggctattagcctggccAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55826967 47 + 59248254 gcctcccacagtgctgggattacaggcatgGCTATTAGCCTGGCCAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935247 47 + 51301725 gcctcccgcagtgctgggattacaggcatggctaTTAGCCTGGCCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637522 47 + 50890351 gcctcccgaagcgctgggattacaggcatgGCTATTAGCCTGGCCAA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129157 0 - 122678785 C e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=202761.000000 s hg38.chr19_GL949753v2_alt 758723 70 + 796479 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTCATAAAGC s panTro4.chr19 59959035 70 + 63644993 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906401 70 + 60714840 GTTAAGATTCCTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381838 70 - 106955855 GTTAAGATTCTTGATGCCAACCAATCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684767 70 + 64156825 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAAACCTAGTTATAAAGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827014 70 + 59248254 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935294 70 + 51301725 GTTAAGATTCTTGATGCCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637569 70 + 50890351 GTTAAGATTCTTGATACCAACCACTCACCCACTCCATGTTTTTCAGGATTATAAACACTAGTTATAAAGC i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20129157 70 - 122678785 CTTAAAATCCTTGCTATCTGGCAACCACCCAGTAAATGATTTTCAGGATTACAAATACTAGTTCTAAAGT i canFam3.chr1 C 0 I 252 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=593852.000000 s hg38.chr19_GL949753v2_alt 758793 247 + 796479 ATGAACTGCctgggggt--ggtggctcacacctgtaatcccagcactttgggaggcag------ttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcctgggcgacagagcaa s panTro4.chr19 59959105 253 + 63644993 ATGAACTGCCTAggggt--ggtggctcacgcctgtaatcccagcactttgggaggcagaggcagttggatcacctgaggtcaggagtttgagactagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcaatgagtggagatcatgccattgtactccaccctgggcaacagagcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906471 255 + 60714840 TTGAACTGGCTGGgggtgaggtggctcacacctgtaatcccagcactctgggaggccgaggcagttggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcacttgaacctgggaggtggaagttgcagtgagtgcagatcatgccattgtactccagcctgggtgacagagcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103381908 253 - 106955855 TTGAACTggctggaggt--ggtggctcgcgcctgtaatcccagcactatgggaggctgaggcagttggatcacttgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctc------------------tagctgggcgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctgggaggtggaagttgcagtgagtggagatcatgccattgtactccagcccgggcgacagagcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60684837 271 + 64156825 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggaccacctgaggtcaggagttcaagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggtgtggtggtgtgcacctgtaatcccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcagtgagtcaagatcgtgcccttgtagtcaagcctgggtgacagagcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827084 271 + 59248254 TTCAACTggctgggggt--ggtggctcacgcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47935364 271 + 51301725 TTCAactggctgggggt--ggtggctcaggcctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtcaggagtttgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcatggtggtgtgcacctgtaaccccagctacttggagacaggagaatcgcttgaacctaggaggtggaagttgcaatgagtcaaCATCGTGCCATTGTagtcaagcctgggtgacagagcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637639 271 + 50890351 TTGAACTggctgggggt--ggtggctcatacctgtaatctcagcactttgggaggctgaggcaggtggatcaccagaggtcaggagttcgagaccagcctgaccaatatggtgaaaccccacctctactaaaaataccaaaattagctgggcgtggtggtgtgtacctgtaatcccagctacttggagacaggagaatcacttgaacctaggagttggaagttgcagtgagtcaagatcgtgccattgtagtcaagcctgggtgacagagcaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20129227 252 - 122678785 I e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=45888.000000 s hg38.chr19_GL949753v2_alt 759040 20 + 796479 gacttcatctcaaaaataaG s panTro4.chr19 59959358 20 + 63644993 gacttcatctcaaaaataaG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906726 20 + 60714840 gacttgatctcaaaaataaG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382161 20 - 106955855 gacttcatctcaaaaataaG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685108 20 + 64156825 gacttcatctcaaaaatata i rheMac3.chr19 C 0 I 4 s macFas5.chr19 55827355 18 + 59248254 gacttcatctcaaaaata-- i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47935635 20 + 51301725 gacttcatctcaaaaatata i papAnu2.chr19 C 0 I 341 s chlSab2.chr6 47637910 20 + 50890351 gacttcatctcaaaaataaa i chlSab2.chr6 C 0 I 1 s canFam3.chr1 20129479 20 - 122678785 ttttttatattaaaaaaaaA i canFam3.chr1 I 252 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=7874.000000 s hg38.chr19_GL949753v2_alt 759060 5 + 796479 -TAagt s panTro4.chr19 59959378 5 + 63644993 -TAagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906746 5 + 60714840 -TAagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382181 5 - 106955855 -TAagt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685132 5 + 64156825 -taaat i rheMac3.chr19 I 4 C 0 s macFas5.chr19 55827376 5 + 59248254 -taaat i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47935996 5 + 51301725 -taaat i papAnu2.chr19 I 341 C 0 s chlSab2.chr6 47637931 5 + 50890351 -taaat i chlSab2.chr6 I 1 C 0 s canFam3.chr1 20129499 5 - 122678785 AAAAA- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 53786 144 + 138250 I a score=136968.000000 s hg38.chr19_GL949753v2_alt 759065 49 + 796479 aaagctccaactgtttgttccacctattctctgggcggggtcctgtgct s panTro4.chr19 59959383 49 + 63644993 aaagctccaactgtttgttccacctattctctgggcagggtcctgtgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906751 49 + 60714840 aaagctccaactgtttattccacctattctctgggtggtgtactgtgct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382186 49 - 106955855 aaagctccaactgtttgttccacctattctctgggcagggtactgtgct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685137 49 + 64156825 aaaGCTccaactgtttattccgcctgttctctgggcagggcactgtgct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827381 49 + 59248254 aaaGCTCCAACTGTTTATTCCGCCTGTTCTCTGGGCAGGGCACTGTGCT i macFas5.chr19 C 0 I 471 s papAnu2.chr19 47936001 49 + 51301725 aaagctccaACTGTTCATTCCGCCTGTTCTCTGGGTGGGGCACTGTGCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637936 49 + 50890351 aaaGCTCCAactgtgtattccgcctgttctctgggcagggcactgtgct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53930 49 + 138250 aaggCTGCAACTGTTTATACAGCCTATTCTCTGGGTGGGTCACGGTGCT i calJac3.chr22_GL285922_random I 144 C 0 s canFam3.chr1 20129504 22 - 122678785 AAAGCT---------------------------Ggtcaggccctgggct i canFam3.chr1 C 0 C 0 a score=2552.000000 s hg38.chr19_GL949753v2_alt 759114 1 + 796479 g s panTro4.chr19 59959432 1 + 63644993 g i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906800 1 + 60714840 g i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382235 1 - 106955855 g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685186 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47936050 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637985 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53979 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129526 1 - 122678785 g i canFam3.chr1 C 0 C 0 e macFas5.chr19 55827430 471 + 59248254 I a score=1049056.000000 s hg38.chr19_GL949753v2_alt 759115 354 + 796479 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctgcactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtgcagctggtttggggtgaagctggagttaccctgagtacagcctgactccaggcgtcagctccacggcctcttcctctgAGACACGGTTTTCTCATCCGCCAGCAGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCAACGGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACGTAGGCGAGGAGCAGGCATGAGGCCTCAGGGACGGTCTCTGAG s panTro4.chr19 59959433 354 + 63644993 gccctttcaaggaaggtctcgtataacccccccagtgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggtacagctggtttggggtgaagctggagttaccctgagcacagcctgactccaggcgtcagctccacggcctcttcctctgAGACACGGTTTTCTCATCCGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACGGAGGAAAGGGACCTGTGCTCTGTGCCTTGGAAGACGTAGGCAAGGAGCAGGCATGAGGTCTCAGGGACCGTCTCTGAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56906801 354 + 60714840 gcgctttcaaggaaggtctcgtctaaccatcccactgactgtgaggtgagtcctattaaggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgtagctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACAGCCTCTTCCTGTGAGACACGGTTTTCTCATCAGCCAGAGGGCCTCT-GCCTACTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCTGTGCTCTGTGCCTCAGAAGACACAGGCGAGAAGCAGGCATGAGGCCTCAGGGACCGTCTCTGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382236 353 - 106955855 gccctttcaaggacggtctcgtctaaccctcccagtgactgcgaggtaagtcctattaaggcctactctctgcagaggaagaaac--aggct-------------------cagaggggtaacagctcttccccaggaggcgcagct-gtttggggtgaagctggagttacgctgagcacagcctgactctaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCTGCCAGCGGGGCTCT-GCCTGCTTCCCGGGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAAGGACCTGTGCTCTGTGCCTCGGAAGATGCAGGTGAGGAGCAGGCATGAGGCCTCAGGGACTGTCTCTGAG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685187 352 + 64156825 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgcagatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgaacacagtctgactccaggagtcagtTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTATTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGTGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55827901 351 + 59248254 GCCCTTTTAAGGAAGGtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggggtaacagcacttccccaggaggcgcggctggtttggggtgaagctggagttaccctgagcacagtctgactccaggagtcagttccacggcctc-tcctctgagacacgctTTTCTCATCGGCCAGCTGGTCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i macFas5.chr19 I 471 C 0 s papAnu2.chr19 47936051 351 + 51301725 GCCCTTTTAAGGAAGGTCTTGTCTAACCCTCCCAGTGCCTGTGAGGTGAGTCCTGTTATGGCCTCCACtctgcagatgaagaaac--aggct-------------------cagaggggTAACAGCACTT-CCCAGGAGGCGCGGCTGGTTTGGGGTGAAGCTGGAGTTACCCTGAGCACAGCCTGACTCCAGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGTTA-GAGGCTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGCGGCCCCAGGGACCGTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47637986 352 + 50890351 gcccttttaaggaaggtcttgtctaaccctcccagtgcctgtgaggtgagtcctgttatggcctccactctgccgatgaagaaac--aggct-------------------cagaggtgtaacagcacttccccaggaggcgtggctggtttggggtgaagctggagttaccctgagcacagcctgactccaGGAGTCAGCTCCACGGCCTCTTCCTCTGAGACACGGTTTTCTCATCGGCCAGTGGGGCTCT-GCCTGCTTCCTGAGGCTGACA-GAGGTTGGCAGGCCAGGTCGACAGAGGAAAGGGACCCGT--CCTGTGCCTCAGAAGACACAGGCGAGGAGCAGGCATGAGGCCCCAGGGACCGTCTCTGAG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 53980 328 + 138250 GCCCTTTTCAGGAAGGCCTCGT---------------------------------------------Ctctgcagatgaagaaag--aggctggtcggggggggggggggggggggaggttacaccatttccccaggagacacggctggtgtggggtgaagctggagctaacccgagcacagcctgactccaggagtcagttccacggcctcttcctctgAGACATGGTTTTCTCATCAGCCAGCAGCGCTCT-GCCTGCTTCCTGGGGCTGTTG-GAGGGTGGCAGGCCACATCAACACAGGAAAGGGACTCAACCTCTCTGCCTCGTATGATGCAGGGGAGGAGCAGGTATGAGGCCCCAGGGACCGTCTCTGAG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20129527 335 - 122678785 gccattttaagg-----cccatctcatcctcccagtaagtgtgaggagggcactaggatggccctc-ctgtgttgttaaggcaactaaggac-------------------ctaagtggtgaggctgcttccccaggtggcacagtttgtttggggtgaaggtggagtcgccccaagcaCAA-------CCAGGAAGCAGCTCCATAATCCCCTCCTCTGGGACTCAA-TTTCTTATCAAACAGCA----TCTAGCCTATTTCCTGGGGCTATTCTGAGGCCACTAGGCTGAAT--ACACATGTA---GACTCATGCTTGGCATCCCAGGAGATACAGGGGAGGGGGCAGAGCGAAGCCGCTCATGTAGTCTCTGAG i canFam3.chr1 C 0 I 519 a score=3600.000000 s hg38.chr19_GL949753v2_alt 759469 1 + 796479 G s panTro4.chr19 59959787 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907155 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382589 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685539 1 + 64156825 G i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828252 1 + 59248254 G i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936402 1 + 51301725 G i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638338 1 + 50890351 G i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54308 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20129862 519 - 122678785 I a score=4031525.000000 s hg38.chr19_GL949753v2_alt 759470 1253 + 796479 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCACGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGAAAGAGAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGGAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttcataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgcgtggcggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAGATTTCTCAAT-----------------------------------------------------------------------CTCAGCACTGTGGATGCTGTGGGTTGGGAGGAGTGAGGGGCCATCCCGTGCGCTGTAGGACATTGAG-AGCATCTGGGCCTTTACCCTCCAGATGCCCAGAGCAATCTCTCCCCAAGCC-----------AGCTGTGATCACTG-TGTTTCCAGGCATTGACAACTG----CGGGTCA---AAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCGAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCGTCAAAGTCTATGTGCCCAGCAACATGGGCCAGGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA s panTro4.chr19 59959788 1357 + 63644993 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCCGCGTGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACTGAGGGGAG------------GGGTCCA-GCCTCACCTGGGAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCACCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCGGAGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------CCTGGAGGGCTTGATAAACCCAGAACGCTGAGTTCTGATAAACCACAGACAGGTTTTAAACCACCTGTCTGTGGCACTTTGTTACGGAACCCGAGCTGAGTGGTACAGGTAGGAAGGCACCCACCC--GGGAGCCTGCATCGGTGGGTGGCggtgggacctaagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaaagGCCTAGCACAgatttctcaat-----------------------------------------------------------------------ctcagcactatggatgctgtgggttgggaggagtgaggggccatcccgtgtgctgtaggacattgagcagcatctgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCCTCAGAAGAACGATCGATTAGTATCAGTTAGTATCGATTAGTGATGTCTGCTTCAGGCACCAGAAGCGGGCAGCGTGGTCCACATGCTCTACTTTTGCTGACTCTGTTCTGGATCCACCGTTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTGTCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGATGAAAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56907156 1227 + 60714840 GAGGGTCCT-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGACTCAGCATGGAGACCCCAGGCTGGGAGGGGACTCACCGAGTGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCATTGACAGTCACACCAGAACCTGGGGAAGGAAGA----GAAGACTGAGGG-AG------------GGGTCCA-GCCTCACCTGGGAG--------------------GCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTGCACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGCAGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcggcaggatctgagatactgtaactctgaccagctcccagtggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgatttctcgac-----------------------------------------------------------------------ctcagcactatggacgctgtggggtgggaggagtgaggggcagtcctgtgtgctgtaggacattgagcagcatccgggcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----cgggtca---aaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGACTAAACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagt--------------------gatgtctgctgtaggcaccagaagcaggcagcgtggtccacatgctctacttttgccaactctgTTCTGGATCCACTGCTTGGCCTCCCATCAGCCTAGGATCATGGAAAGGCCACTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTTCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGATTAAGGATGACGAAAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103382590 1249 - 106955855 GAGGGTCCTGGGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCACAGCATGGAGA-CCCAGGCTGGGAGGGGACTCACCAAGTGTGGAGCTGGAGAAGGTGGAGCCATGGATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGAGCATTGACAGTCACACCAGAACCTGGGGAAGAAAGA----GAAGACTGAGGG-AG------------GGGCCCA-GCCTCACCTGGAAGGCTGTGGCGGCCCACACCCAGCTGTGGGGCTTTCCCGGCACCAGGCTGCTTCCTGAACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTC-----------------------------------------AGTGAAGTGGTCTTATCTTGCAGGGTGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTTT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------tac-----------------ccc--gggagcctgcatcggtgggtggcagtgggatctgacatactgtaactctgaccagctcccagtgcggctggcaccgctggtccacagaccgtctttcagaagcaAGGGCCCAGCACAGACttctcaac-----------------------------------------------------------------------ctcagcactatggacactgtgggctgggaggagtgaggggcagtcctgtgtgctgtaggacgttgaacagcatccgtgcctttaccctccagatgcccagagcaatctctccccaaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----caagtca---aaactgcccctggttgagactcactgGG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACATCTGATCCAGGCAGATTAGACCACCTGGGATGAACAGACAATCATC---AGAACgatcgattagc--------------------gatgtctgctccaggcaccagaagggggcagcgtggtccacatgctgtactttcgccaACTGTGTTCTGGATCCGCTGTTTGGCCTCCCATCAGCCTGGGATCATGGAAAGGCCGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCGCCCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTGTACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTAGTCAAGAGAAAGTGACCTGGATTAAGGATGACGTAAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60685540 1289 + 64156825 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCATGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTTAGTGGTCTTATCTTGCATCGTCCCTCTTGCTCTGAAATCTTAGTGAAGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaatccaaatcggtgggtgatggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagacggtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacactgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGCGGGCAGGGTGGTCTGTGTGCTCTACTTTTGCAGATTCTGTTGTGGAGCCACAGCCTGGCCTCCCATCAGCCTAGCATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGTTGATGATCCGTGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55828253 1243 + 59248254 GAGGGTCCG-GGGCCCCGGGCTGAGAAAGCAAGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAATA----GAAGACTGAGGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCATCGTCCCTCTTGCTCTGAAATCTT----------------------------------------------AGTGGTCTTATCTTGCAGGGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctggagggcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggaattcaaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggaccttgagcagcatccgggcctttacactccagatgcccagagcaatctctcccccaccc-----------agatgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgagactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGTG-CCCCGTACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCCACGTGGGCCAAGGACGAGAGGCTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47936403 1247 + 51301725 GAGGGTCCT-GGGCCCCGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGA-GGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCGGGGTGCAGGGCGTTGACAGTCACACCAGAGcctggggaagaaaga----gaagactgagGG-AG------------AGGTCCA-GCCTCACCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTTCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------CCTGGAGCACTTGATAAACCCAGAACGCTGAGCT---------------------------------------------------------------------CAC-----------------CCC--AGGAATCCAAATCGGTGGGTGACGGTGGGATCTGAGATACTGTAACTCTGACCAGCTCCCACTGGGGCTGGCACCGCTGGTCCACAGACGGTCTTTCAGAAGCAAAGGCCCAGCACAGATtcctcaac-----------------------------------------------------------------------ctcagcactatggACGCTGTGGATCGGGAGGAGTGAGGGGCCGTCCTGTGTGCTGTAGGACCTGGAGCAGCATCCGGGCCTTTACACTCCAGATGCCCAGAGCAATCTCTCCCCCACCC-----------AGATGTGATCACTG-TGTTTCCAGGCATTGACAACTG----TGGGCCA---GAACTGCCCCTGGTTGAGACTCACT-GG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAGCAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAACAGACAATCAGCAGAAGAACAATCGATTAGT--------------------GATGTCTGCTTCAGGCACCAGAAGGGGGCAGGGTGGTCCGTGTGCTCTACTTTTGCGGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCTAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---TGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTCATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAAAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAAGAGAAAGTGACCTGGATTAAGGATGACAAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47638339 1248 + 50890351 GAGGGTCTG-GGGCCCTGGGCTGAGAAAGCAGGGGTGGAGGGCTCAGCGTGCAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCGTTGACAGTCACACCAGAGCCTGGGGAAGAAAGA----GAAGACGGAGGG-AG------------AGGTCCA-GCCTCCCCTGGAAGGCTGTGGCAGCCCACACCCAGCTGTGGGGC-TTCCGGGCGCCAGGCTGCTTCCTACACTCAAACCCCGTCGTGCCTCTTGCTCTGAAATCTT-----------------------------------------AGTGAAGTGGTCTTATCTTGCA-GGCGGCTCTGCCACATGGCTGCTGGGAGCCGAGCTGT--------------------------cctagagcgcttgataaacccagaacgctgagct---------------------------------------------------------------------cac-----------------ccc--aggagtccgaatcagtgggtgagggtgggatctgagatactgtaactctgaccagctcccactggggctggcaccgctggtccacagaccgtctttcagaagcaAAGGCCCAGCACAgattcctcaac-----------------------------------------------------------------------ctcagcactatggacgctgtggatcgggaggagtgaggggccgtcctgtgtgctgtaggacactgagcagcatctgggcctttaccctccagatgcccagagcaatctctcccccaccc-----------agctgtgatcactg-tgtttccaggcattgacaactg----tgggcca---gaactgcccctggttgggactcact-gG-CTGGAGC-CAAAAGGCTGAGCTGCCTGCCCAACAGCAGCAGGGAAGGACACCTGATCCAGGCAGACTAGACCACCTGGGATGAAGAGACAATCATCAGAAGAACAatcgattagt--------------------gatgtctgcttcgggcaccagaagggggcagggtggtccgtgtgctctacttttgcAGATTCTGTTGTGGAGCCACAGCTTGGCCTCCCATCAGCCCAGGATCATGGAAGGGCTGCTCTAGGCTCAGAG-TAAAGCAAGAGGGAGGC---CGAGCCTAGCG-CCCCGCACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGATGGCCAGCTTGCTCTGGCAGTAGGCGGCTTTGGTGTTATACTTCCTCGTCTGCCAGTTCAAGTCATCAAAGTCTATGTGCCCAGCAACATGGGCCAAGGACGAGAGGTTGATGATCCGCGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTCGTCAGGAGAAAGTGACCTGGATTAAGGATGACAAAAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 54309 1251 + 138250 GAGGGTCCT-GGGCCCTG--------------GGGTGGAGGGCTCAGTGCAGAGACCCCAGGCTGGGAGGGGACTCACCGAGCGTGGTGCTGGAGAAGGTGGAGCCATGGATGCCCGTGTGTCTGCCCAGCTCTGTCCTGGCCACACCGGGGTGCAGGGCATTGACAGTCACGCCAGAGCCTGGGGAA-AAAGA----GAAGACTGAGGG-AG------------GGGT-----CCTTACCTGGAAGGCTGTGGCAGCCCACACTCAGCTCTGGGGC-------------------TTCCTATAGTCAAACCCCATCGTCGCTCTTGCGCTGAAATCTT-----------------------------------------AGTAAGGTGGTCTTATCTTGCAGAGCAGCTCTGCCACGTGGCGCCTGGGGGcagagattt--------------------------cctggagggcttgatagacccagaacaccaggct---------------------------------------------------------------------ca------------------ccc--aggagtctgaatcagtgggtggggctgggatctga--------------gaccagctcccagtggggttggcactgctggtccacagaccatctttcagaGGCAAGGGCCCAGGGCAGATTTCTCAGCGGACGCTGCGGGCTTTGAGGCACTGCTGGTCCACAGACCATCTTTCAGAGGCAAGGGCCCAGGGCAGATTTCTCAGC-----GGATGCTGCGGGCTTTGAGGGgtgaggggctgtcctgtgtgctgcaggacactgaacagcatgtgggcctttaccctccagatgcccagagcaatctctccccgaccc-----------agctgtggttactg-tgcctccaggta-tgacaattc----caggcca---gaagtgctcctggctgagactcact-gG-CTGGAGC-CAGAAGGCTGGGCTGCCTACCGAAT----GCAGGGAAGGACA-CTGATCCAGGCAGACTAGGCCACCTGGAATGAATGAACAATCATCAGAACAACGATCGATTAGT--------------------TACGTCTGCTTCAGGCACCAGAAGCAGGCAGGGTGGTCCCTATGCTCTGTTTTAGCCCACTCTGTTCTAGAGCCACAGCCTGGCCTCCGCCCAGCCCAGGATCACCGAAGGGCTGCTCTGGGCTCAAAG-TA----AAGAGGGAGGC---CGAGCCTAGCG-CCCCATACCTTGCAGCCGCCGGCTCAGCTCCTTGGTGAAGAGGACGACGGCCAGCTTGCTCTGGCTGTAGGCGGCTTTGGGGTCATACTTCCTCGTCTGCCAGTTCAGGTCATCAAAGTCTATGTGCCCAGCAATGTGGGCCAAGGACGAGAGGTTGATGATCCGGGAAGGGGCTGAGGCTTTCAGCTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGGCCTGGGTTAAAG--GGTGACAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20130381 1223 - 122678785 GAGAGTCCT-AGGCCCTGAGCTGAGAGGGCAGGGG-------CTCCGCTAAGGGACCCCAGGCCAGGAGGGTTCTTACCGAGTGTGAAACTGGAGAAGGCAGAGCTGTGCATGCCTGTGTGTCTGCCCAGCTCTGTCCTGGCCACGCCAGGGTGCAGTGCATTGACAGTCACGCCTGTGCCTAGGGAGAGAAGA---GGAGGGATGAGGG-AGTGGGCAAACGTCAGGTTCACACCCCACCTGGAAAGCTGACGTTGCCCATTCTCAGCTCTAGGGC-TACCCAGTACTGTGCCATGTCCTACCTTTGAACCCACAGCACCCTCTTGCTCTGAAACTTC---------------------------------------CACATTGAGGGGTTTCATCTTGCATTGCAGCTCTGTTGCATGACTGCCCAGAGcagagcctcccaaacctgagcgtatgtaaaaatcacccggagcacttgagacacccaaaccgctaggtt--------------------------ccacc--------------------------------------cac-----------------ccccagggaatctgaagcagtgggtcggggtggggtctgagatgttgcagtggtgacaagctcccagcccagctgacattgcgggtccacggatgctctctgaggagcaggg---CAAAGGGTACCTTTCAAC-----------------------------------------------------------------------TCCAGCTCTGTGCACACTGAGGTC-------------AGATCATTCTTGATCCTG-------CTGAGCAG------------------ctagctgccagtagcaacacccaccccacctccactccctgaagcgaggaccacaactatcttcagatactgccaaatgtccctggggcatccacatcacccatggttgagaatcact-AGCCTAGAGCACCAATGACTTAGATGCCTGTGTGGGATGAGCAGGGAAGGATGCC--------------------------------------------------ACGACTGATGAGT--------------------GATGTCTGCTTCAGGCACC---ACCGAACATGGTGGTATGTGTTTCACACATCCACCTGCTCTGTTCTGGGACTGATGCTTGACCTTCCATCGGTCCAGGGTCATAGCAGGACTGTCCCAGGCTCAGAGCTAGAGGAAGAGGAAGGCCAGCGAGGCTCACACACACATACCCTGCAGCCGCCGGCTCAGCTCCTTGGTAAAGAGGATGACGGCCAGCTTACTCTGGCAATAAGCCGCTTTGGTGTCATACTTCCTCTTCTCCCAGTTCAAGTCATCAAAGTCTATGTGTCCTGCAACGTGGGCCAAGGACGAGAGATTGATGATCCGTGAAGGGGCTGAGGCTTTCAATTTGTCCAGCAGCAAGTTTGTCAAGAGAAAGTGACCTGGGTGAAGGACAACAAAAA i canFam3.chr1 I 519 I 831 a score=247827.000000 s hg38.chr19_GL949753v2_alt 760723 88 + 796479 GGTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggacgacgggggaggatcgcttgaacccaTGGTGCAGCC-CCTGCCCA s panTro4.chr19 59961145 88 + 63644993 GCTCACTTT-------------tgactcacacctaaaatcccagcactttgggaggatgacgggggaggattgcttgaacccaCGGTGCAGTC-CCTGCCCA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908383 88 + 60714840 GATCACTTT-------------tggctcacacctaaaatcccagcactttgggaggatgacgggggaggatcgcttgaacccaCGGTGCGGCC-CCTGCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383839 88 - 106955855 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacaggggaggatcgcttgaacccaCGGTGCAGCC-CCTGCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686829 89 + 64156825 GGTCACTTT-------------tggctcacgtctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccaCGGGGCAGCCCCCTGCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829496 89 + 59248254 GGTCACTTT-------------tggctcacgcctaaaattccagcactttgggaggacgacgggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47937650 89 + 51301725 GGTCACTTT-------------tggctcacgcctaaaatcccagcactttgggaggacgacgggggaggatcgcttgagcccacggGGCAGCCGCCTGCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639587 89 + 50890351 GGTCACTTC-------------tggctcacgcctaaaatcccagcactttggggggacgacaggggaggatcgcttgagcccacggggcagCCCCCTGCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55560 95 + 138250 GGTCACTTTTggtcgggcacggtggcttacgcctgtaatcccagcacttcgggag-------ggggaggatggcttgagCCCACGGTGTGGCCCCCTGCCCA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20131604 831 - 122678785 I a score=623176.000000 s hg38.chr19_GL949753v2_alt 760811 171 + 796479 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGATGC s panTro4.chr19 59961233 171 + 63644993 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACACCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGAGGAGGAGACATCCCGGTGAGGACAGACCCCAGCCTGAGGC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908471 171 + 60714840 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGATCCAGTGGGGACACCGCATCACACCTGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103383927 171 - 106955855 GGCCTCACCCAGGTAGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCATCGCATGACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGGGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCCGAGGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60686918 180 + 64156825 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAAgggggggggggggggggggggggaggAGACATCAGGGAGAGGACAGACCGCAGCCTGAGGC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829585 171 + 59248254 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCAGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GGGAGGGGTGGGGAAGGAGACATCAGGGTGAGGACAGACCCCAGCCTGAGGC i macFas5.chr19 C 0 I 16 s papAnu2.chr19 47937739 171 + 51301725 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTggaa---------gggaggggtggggaaggagaCATCAGGGAGAGGACAGACCCCAGCCCGAGGC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639676 171 + 50890351 GGCCTCACCCAGGTGGTTAACGCCAAACTGCATCTCGAAGCCGTCCTCGGTGGTCCAGTGGGGGCACCGCATCACGCCCGCGTTGTTGATTAGAATGTCCACTCGCTCCTCCTCTGGAA---------GAGAGGGGTGGGGAAGGAGACGTCAGGGAGAGGACAGACCCCAGCCTGAGGC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55655 169 + 138250 GGACTCACCCAGGTGGTTAACGCCAAACTGCATCTCAAAGCCGTCCTCCGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACTAGAATGTCCACTCGCTCCTCCTCTAGAA-----------GACGGGTGGGGAAGGAGACCTCAGGGTGAGGACAGACCCCGGCCTGAGGC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20132435 164 - 122678785 GGCCTCACCCAAGTGGTTAACACCAAACTGCATCTCAAAGCCGTCCTTGGTGGTCCAGTGGGGGCACCGCATCACGGCCGCGTTGTTGACCAGGATATGAACTTGCTCCTCCTCTAGGA---------GACAGGGGTGAGGGCAGGTATGTCA-------GTCGCATGCCTGCCTGGAGC i canFam3.chr1 I 831 C 0 a score=224514.000000 s hg38.chr19_GL949753v2_alt 760982 126 + 796479 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacctgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt s panTro4.chr19 59961404 126 + 63644993 ACCAGCA------------------------------------------GAAACACTCCTGTGctcccacaacccgtgaatgtggcctg-tgccggaaacagggtctgtgc-cgaagtggccatgtcaggatgcggtcattagggtgagccctaatccaatgactggtgt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908642 126 + 60714840 GCCCGCA------------------------------------------CAAACACTCCTGTGctcccagaacccatgaacgtggcctg-tgccagaaacagggtctgtgc-cgaagtggccacatcaggatgaggtcattagggtgagccctaatccaatgactggtgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384098 124 - 106955855 ACCAGCA------------------------------------------GAAACACTCCTGTactcccaga--ccgtgaacgtggcctg-tgccggaaacagggtctgtgc-agaagtggccacgtcaggatgaggtcattagggcgagccctaatccagtgactggtgt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687098 107 + 64156825 AGCAGTA------------------------------------------GAAACGTTCCTGTGCTCCCAGAACCCGTGAACATGGCCT-------------------GTGC-TGAAGTGGCCACgtcaggaagaggtcattagggtgagccc-aatccagtgactggtgt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47937910 125 + 51301725 AGCAGTA------------------------------------------GAAACGTTCCTGTACTCCCAGAACCCGTGAACATGGCCTG-TGCCGGAAACAGGGTCCGTGC-TGAAGTGGCCACGTCAGGAAGAGGTCATTAGGGTGAGCCC-AATccagtgactggtgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639847 126 + 50890351 AGCAGTA------------------------------------------GAAACGTTCCTGTGctcccggaacccgtgaacatggcctg-cgccggaaacagggtctgtgc-caaagtggccacgtcaggaagaggtcattagggtgagccctgatccagtgactggtgt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 55824 100 + 138250 -ACAGTA------------------------------------------GAAACGTT---------CCGGAGCCCGTGAAGGTGGCCCC-TGCTGGAAACAGG--CTGTGC-AGAAGCGGCCA--------------cattagggtgaggcctaatccaatgactggtgt i calJac3.chr22_GL285922_random C 0 I 286 s canFam3.chr1 20132599 156 - 122678785 ACCAGCGCAATTGGTGTAAAACAACCCCTGCACTGAGCTGAACTGTCCTAAAACATTCAGGCCCAcccagagcctgggaatgcaacctgtttttggaaacag--tccttgcaaaaagtaaagaagttaagataaggtca-cagcgtaggccctaatgca----------- i canFam3.chr1 C 0 C 0 e macFas5.chr19 55829756 16 + 59248254 I a score=405565.000000 s hg38.chr19_GL949753v2_alt 761108 201 + 796479 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacagaggcaaagaccggagaggcacagctccaaggtgagggtgggccgcccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgcgat-tcagactgccggcttccggaaccg s panTro4.chr19 59961530 200 + 63644993 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---atgtgtggacggaggcaaagaccggagaggcacagctccaaggtgagggtggg-cgcccctgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccgtgat-tcagactgccggcttccggaaccg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908768 199 + 60714840 ccttatatgaaggg-aaacagagacagagacacatggggaga---aggcc---atgcgtggatggaggcagagaccagagaggcacagctccaaggtgagggtgcg-cacccccgctggaag-tggaagaggctgggaggattatggcccgtctcacagg-tcacagccacagggacaccatgat-tcagactgccggcttccggaaccg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384222 200 - 106955855 ccttataggaagggaaaacagagacagagacacatggggaga---aggcc---acgtgtgaacggaggcggagaccggagaggcgcagctccaaggtgagggtggg-cacccccactggaag-tggaagaggctgggaggattacggcccgtctcacagg-tcacagccacagggacaccgtgat-tgagactgccggcttccggaaccg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687205 201 + 64156825 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acatgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaagaggctgggaggattaccgcccgtctcacaggatcacagccacagggacaccgtgat-tcggactgccggcttccggacccg i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938035 201 + 51301725 ccttataggaagggaaaacagagacagagacacacagggaga---aggcc---acATGTGGACGGAAGCGGAGACCGGAGAGGCGCAGCTCCAAGATGAGTGTGGG-CGCCCCCGCTGGAAG-TGAAAGAGGCTGGGAGGATTACCGCCCGTCTCACAGGATCACAGCCACAGGGACACCGTGAT-TCAGGCTGCCGGTTTCCGGACCCG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47639973 201 + 50890351 ccttataggaagggaaaacagagacagagacacacggggaga---aggcc---acgtgtggacggaagcggagaccggagaggcgcagctccgagatgagtgtggg-cgcccccgctggaag-tggaaaaggctgggaggattaccgcccgtctcacaggatcacagccacagggacgccgtgat-tcggattgccggcttccggacccg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56210 150 + 138250 CCTTACAGGAAGGGAAAACAG----------------------------------------ACGGAGACACGGACAAGAGAG-----------------GTGTGGG-CGACTGCACTGGAAG-TGGAGGAGGCTGGGAGGAttacagcccggctcacaggaacacagccccagagacacccagat-tccaactgctggcttccagaacgg i calJac3.chr22_GL285922_random I 286 C 0 s canFam3.chr1 20132755 163 - 122678785 ------------gcaggacagggactgaggaccatggggaaacagaggccatgatgtatcgat-gagccaaggatcactgaggaccaac------------------agccactgccagaagctgaaagaagcagaaaggatctc-----------ctgg-tcccttcct----gagactgtgatctcagacttctggcctccaaaactg i canFam3.chr1 C 0 I 2038 e macFas5.chr19 55829756 16 + 59248254 I a score=1119423.000000 s hg38.chr19_GL949753v2_alt 761309 570 + 796479 tgagggaatgcacgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagctccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACGGGAGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCATACAAGCAACCAAAGGACACAC-AGATGGAGACTGCAgcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcgggaaaatcgcttgaaaccaggag s panTro4.chr19 59961730 570 + 63644993 tgagggaatgcacgtctgagagtgt-aagccactgggtttgcagtacgttgttacagcggccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCCTTCCTGCCGGAGCCCCGAGGCCAAAAACAGGGGGTTACCGGTGGGAGCCCCGGCAC--------CGCAGGC---G-TGGTTTCATTCCCAAACCTGCCACCTCACTCACACAAGCAACCAAAGGACACAC-AGATGGAGACTGCAgcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtaccactcagctcgggttccgtaacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcgtggtggcatgcacctgtaatcccagctactcaggaggctgaggcaggaaaatcgcttgaaaccaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56908967 573 + 60714840 tgaggaaaggcatgtctgagggtgt-aagccactgggtttgcagtacattgttacagcagccccaggacactcacgcaCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTACAGGAGCCCCGAGGCCAAAAATGGGGGGTTACCGGTGGGAGCCCCGGCACCACAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCATCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGCGACTGCagcctcagttgcctcagctgtaaaatgtgctgaaccacagggccttcttcCCtgtaccactcagctcgggttccataacaa------agtgccacagacaggcggtttaaaacctcacagacctcgccgggcacggtggctcacgcctgtaatcccagcacattgagaggccgaggtgggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggagaaactgcgtctttactaaaaatacaaaattagccaggcgtggtggcgtgcacctgtaattccagctactcaggaggctgaggcgggagaatcgctt-aaaccaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384422 571 - 106955855 tgagggaatgcatgtctgagggtgt-aagccactgggtttgcggtacattgttacagcagccccaggacactcacacGCCCTCCGCACCTCCATCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAAACGGGGGGTTACCTGTGGGAGCCCCGGCACCGCAGGCTCGCAGGT---G-TGGTTTCATTCCCAAACCTGCCACCTCAC----ACAAGCAACCAAAGGACACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCtgtaccactcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacggacctggcccggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacct---gtcaggagttcaagacaagcctggcaaacatggagaaaccgcgtctttactaaaaatacaaaattagccaggcatggtggcgtgcacctgtaattccagctactcaggaggccgaggcgggagaatagcttgaaaccaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687406 571 + 64156825 tgagggaatgcatgtctgagggtgtaaagccactgggtttgaggtacctcgttacagcaggtccaggacactcacac--------CCCCTCCACCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCAAGGCCAAAC----GGGGTTACCGGTGCGAGCCCTGGCACTGCAGGTTTGCAGGTGCGG-CGGTTTCATTCCGAAGCCTGCCACCTCACTCGCACAGACAACCAGAGGGCACACAAGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcgctgaaccacagggccttcctcCCtgtatcgctcggctcaggttccataacaa------agtgccacagacaggtggtttaaaacctcacagacctggccgggcgtggtggctcacgtctgtaatcccagcactttgggagaccgaggtgagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaatggcgtctctactaaaaatacaaaattagccaggcgtggtggtgggcacctgtaatgccagctactcaggaggctgaggcaagagaatcgcttgaaaccgggag i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47938236 567 + 51301725 TGAGGGAATGCATGTCTGAGGGTGTAAAGCCACTGGGTTTGAGGTACCTCGTTACAGCAGGCCCAGGACACTCACAC--------CCTCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCTGAGGCCAAAC----AGGGTTACCGGTGCGAGCACTGGCACCGCAGGTTTGCAGGT---G-CGGTTTCATTCCGAAGCCTGCCACCTCACTCACACAGACAACCAAAGGGCACAC-AGATGGAGactgcagcctcagtttcctcagctgtaaaatgcgCTGAACCATAGGGCCTTCCTCCCTATATCGCTCGGCTCAGGTtccataacaa------agtgccacagacAGGTGGTTTAAAACCTCACagacctggccgggcgcagtggctcacgtctgtaatcccagcactttgggagaccgaggtaagcggatcacctgaggtcaggagtttgagactagcctgacccacatgaagaaacggcgtctctactaaaaatacaaaattagccaggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaaaagaatcgcttgaaaccgggag i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640174 566 + 50890351 tgagggaatgcatgtctgagggtgt-aagccactgggtttgaggcacctcgttacagcaggcccaggacactCACGC--------CCCCTCCTTCTAAGCCTTGGGACTCTTTCCTGCAGGAGCCCCGAGGCCAAAC----GGGGTTACCGGTGCGAGCCCCGGCACTGCAGGTTTGCAGGT---G-CGGTTTCATTCCCAAGCCTGCCCCCTCACTCGCACAGACAAGCAAAGGGCACAC-AGATGGAGACTGCagcctcagtttcctcagctgtaaaatgcactgaaccacagggccttcctcCCTATATCGCTCGGctcgggttccataacaa------agtgccacagacgggtggtttaaaacctcacagacctggccgggtgcggtggctcacgtctgtaatcccagcactttgggaggccgaagtgagcggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaactgcgtctctactaaaaatacaaaattagccgggcgtggtggcgggcacctgtaatgccagctactcaggaggctgaggcaggagaatcgcttgaaaccgggag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 56360 471 + 138250 tgagggaatgcgcttccgagggtgg-aagcccctgggtttgcggtacacggttacagcagccccaggacacacacacaCCCTGCACACCTCCATGGAAGCCCTGGGACTCTTTCCTGCAGG----------------------------------------------------TTCTCAGGC---GCTGGTTTCATTCCCAAACCTGCCACCTCACTCGCACAAGCAACCACAGGGCACAC-AGACGG-------AGCCTCAGTTTCCACAGC-----------------------ACCTTCCTCCCTGTGCCACTGGGTTCAGGTTCCATAACGAAGTGCCAGTGCCACAGACAGGTGGGTGAAAACCTCA--GACCCggccgggcatggtggctcacgcctgt-gtcgca----tttgggag--------------------cgaggaccgga--ttgaa---agcatggccaacacagtgaagccccgtctctaccaaaaacacaaaaTTAgccgggcatggtggctcacgcctgtgatcccagcagtttgggagggcgaggcaggtggatcacctgaggtcaggag i calJac3.chr22_GL285922_random C 0 I 218 e canFam3.chr1 20132918 2038 - 122678785 I e macFas5.chr19 55829756 16 + 59248254 I a score=269628.000000 s hg38.chr19_GL949753v2_alt 761879 179 + 796479 gcagagggtgcagtgagccgagatcgcatcattacactccatcctgggcaataaaagcaaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatccgctctggtctct s panTro4.chr19 59962300 179 + 63644993 gcagagggtgcagtgagccgagatcgcgtcattacactccatcctgggcaataagagcgaaactccatctcaa--------aaaaaaaaaaaaaaatcaca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctcagggccctcagggaggatctgctctggtctct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909540 170 + 60714840 gcagagggtgcagtgagccgagatcacgtcattacactccatcctgggcaataagagcaaaactccatctcaa--------aaaaaaa---------caca-gtcccggaggctggaaggaccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103384993 178 - 106955855 gcagaggtggcagtgagccgagatcgcgtcattacactccatcctgggcaacgagagcaaaactccatttcaa--------aaaaaaaaaaaaaaa-atca-gtcctggaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggcccccagggagaatctgctctggcctct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60687977 184 + 64156825 gcaggggctgcagtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaatcactcactcaatcaattaat---caca-gtcccagaggctggaagtcccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctggcctct i rheMac3.chr19 C 0 I 1362 s papAnu2.chr19 47938803 177 + 51301725 gcaggggctgcagtgagaagagatcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatcaat---cacacGTCCCTGAAGCTCGATGTCccagatcaaggtgtgggcaagGCTGGTTCCCTCTGAGGGCCCTCAGGGAGAAtctgctctggcctct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640740 172 + 50890351 gcagaggctgcggtgagcagaggtcgcaccattacactccagcctgggcaacaagagcgagactccatctcaa--------tcaatcaatacata--caca-gtcccagaggctggaagttccagatcaaggtgtgggcagggctggttccctctgagggccctcagggagaatctgctctgg----- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=79619.000000 s hg38.chr19_GL949753v2_alt 762058 101 + 796479 ctccttggctcacaggtgaccatctcctctctccctcttcccttcctcttccctttggagctgtctCTTTTTTTTTTTTC-----ATTTTTCCTTTTTTAAtttta s panTro4.chr19 59962479 95 + 63644993 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTCTTTTTTTTTTTTCCTTTTATTTTTCCTTTTtaaatttta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56909710 94 + 60714840 ctccttggctcacaggtgaccatctcctctctccctcttcCCTTC-----------GGAGCTGTCTTTTTTTTTTTTTCC-TTTTAtttttccttttttaatttta i ponAbe2.chr19 C 0 I 5419 s nomLeu3.chr10 103385171 90 - 106955855 ctccttggttcagaggtgaccatctcctctctccctcttcccttcctcttccctttgGAG----CTCTTTTTTTTTTTTC------------CTTTTTTAATTTTA i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47938980 95 + 51301725 ctccttggctcacaggtgaccgtctcctctctcccttctcccttcctcttccctttggagctatctctctcttttttttt--------t---ctttttaaattttt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640912 73 + 50890351 -------------------------cttctctcccttctCCCTTCCTCTTCCCTTTGGAGCTGTCTCTCTCTTTTTTTTT--------TTTCCTTTTTAAATTTTA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=144.000000 s hg38.chr19_GL949753v2_alt 762159 2 + 796479 ga s panTro4.chr19 59962574 2 + 63644993 ta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385261 2 - 106955855 ta i nomLeu3.chr10 C 0 I 652 s papAnu2.chr19 47939075 2 + 51301725 tt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640985 2 + 50890351 TA i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=61656.000000 s hg38.chr19_GL949753v2_alt 762161 101 + 796479 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgaactcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG s panTro4.chr19 59962576 101 + 63644993 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttgacctcaagcaatcctcctgctttggcctcccagagtgctgcaatttca-----CTG i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103385915 101 - 106955855 ---------------tttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aactcttggcctcaagcaatcctcctgctttcgcctcccaaagtgctgcaatttca-----CTG i nomLeu3.chr10 I 652 C 0 s papAnu2.chr19 47939077 140 + 51301725 t------------tttttttgagacggagtctcgctctgtcacccaggctggagtgcagtggccgaatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47640987 116 + 50890351 TGCATATAtatactttttttcagacatggtctcactatgttgcccaggctgg---------------tctca----------------aacttttggcctcaagcaatcctcctgctttgccctcccaaagtgctgcgatttca-----CTG i chlSab2.chr6 C 0 I 43 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=27923.000000 s hg38.chr19_GL949753v2_alt 762262 120 + 796479 ------CCCCCAGCCTAtttttttttttttgggggggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa s panTro4.chr19 59962677 111 + 63644993 ------CCCCCAGCCTAtttttttt---------gggggagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttggctcactgcaacctccgcctcccaggttcaaacaa i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103386016 118 - 106955855 ------CCCCCAACCTAttttttttttttttt--tttggagatggagtttcactcttgtcacacaggctggagtgcaatggtgcgatcttggctcactgcaacctctgcctcccaggttcaaacaa i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939217 89 + 51301725 ccacctcgcccggctaagtttttgtattttt---agtagagacggggtttcact-gtgttagccaggatgg---------------tctcgatctcctg--------acctcgtga---------- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56909804 5419 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=244297.000000 s hg38.chr19_GL949753v2_alt 762382 367 + 796479 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccaccacaccggg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctacctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta s panTro4.chr19 59962788 367 + 63644993 ttctcctgcctcagcctcccaagtagct-ggactacaggcatccaccatcacacctgg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggctagtctcacactcctgac-ctc--gtgatccacctgcctcagcctcccaaagtgctgggactgcaggcgtgagccaccacactcagtcTACTTGGCCTAttttttatatttcttt---gagacagggtctccctc-tgacacctgggctggagtacagtggcgcagtcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcatgcgccaccatgcccagcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915223 368 + 60714840 ttctcctgcctcagcctctcaagtagct-gaaccacaggcatccaccaccacattagg--------ttaattttt---tgtat-------ctttagtagagacggggcttcaccatgttggccaggcaagtctcaaactcctgacaatc--atgatccacctgcctcagcctcccaaagtgctgggattgcaggcgtgagccaccacactcagtcCACTTGGCCTAttttttatatttcttt---gagacggggtctgtctc-tgacacctgggctggagtacagtggcacaatcactgctcactgcagcctcaacctcccaggctcaagcaatcttcttg-ctcagc-----------ctcccaagtagctggggccacaggcacgtgccaccatgcccagcta i ponAbe2.chr19 I 5419 C 0 s nomLeu3.chr10 103386134 375 - 106955855 ---ttctgcctcagcctcctgagtagct-ggactacaggcacctgccaccacacctgg--------ttaattttt---tgtat-------ctttactagagacggggcttcaccatgttggccaggctagtctcaaactcctgac-ctc--gtgatccacctgcctcggcctcccaaagtgctgggagtgcaggcgtgagccaccacacttggtcCACTCGGCCTAttttttatatttcttt---gagacggggtgtccctc-tgacacctgggctggagtacagtggtgcaatcactgctcactgcagcctcaacctcccaggctcaagcagtcttcttg-ctcagcctcccaagtagctcccaagtagctggggccacaggcacgtgcccccatgcccagcta i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47939306 368 + 51301725 tccgcccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggccttctttttaaattttatatgcatatatatactttttttcagacatggtctcactatgttgcccaggctggtctcaaacttttggc-ctcaagcaatcctcctgctttgccctcccaaagtgctgtgatt-----------tcaccac-------------ggcctattttttttttttttttttggaggtggagtttcattcttttcgcccaggctggagtgcaatggcgcgatctcagctcac-gcaactttcacctcccaggttcaaacaattctcctgcctcagc-----------ctcccgagtagctgggactacaggcatccgccaccatgcccggcta i papAnu2.chr19 C 0 I 1261 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=96516.000000 s hg38.chr19_GL949753v2_alt 762749 200 + 796479 GCACgtctgtttctgtgcgcaaatctccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaaatgaagtcacatgctgagggatgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC s panTro4.chr19 59963155 200 + 63644993 GCACgtctgtttctgtgcgcaaatttccccttttcataaggacaccagtcactggattagggcccaccctaatgacctcattttcacttcaggacctctgtaaacacccacctctaagtgaggtcacatgctgagggacgggggttcaggatcccaacctatccttgggggtggaggacacaatgaaattcataaTGCTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915591 200 + 60714840 GCACgtctgtttctgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctatagacctcattttaacttcaggacctctgtaaacacccacctctaaatgaggtcacatgctgagcgacgggggttcaggatcccaacctatccttgggggtggaggacacaatggaattcataaTGCTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386509 197 - 106955855 GCACgtctgtttgtgtgtgcaaatttccccttttaataaggacaccagtcactggattagggcccaccctaatgacctcattttaacttgaggacctccgtaaacacccacctgtaagtgaggtcacatgcggagggacagggggtcaggagcccaacctatcctt-ggggtggaggacacaaGGGAATCAGTAAAA--A i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60688161 1362 + 64156825 I a score=528242.000000 s hg38.chr19_GL949753v2_alt 762949 703 + 796479 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACAC--AGACACCATCTGGTTCTCTGTGTGAGAAGGAGGGGGTtgcagcacacccgtcatgaataccagctctggagcaggacagacaggttcaaagcctggctccaccccgaccagctgcatgatcctggccaagtcacatcacttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaaaaggataataacatcacctgcctggtacaactgtatacttactcattcagtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcaggaggtgacgcagaaactgggaccgggaaaatgaggcagggcccacgtgcggagacccagggaagggggatgcaggcagcaggcgcagcacgggtaaggcccaaaggcggga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCAGCTTCTGGTGTttt----gttttg---------------gttttttttctttttttttttgagatgaagtctcactctgccacccaggctggagtgcagtggtgtgatct s panTro4.chr19 59963355 715 + 63644993 CCGAAGTGGTTTTCGGCGGGGATCGTGAATTAGGTGTCCAGCGCGTAACACACAGAGACACCGTCTGGTTCTCTGTGTGAGAAGGA--GGGTtgcagcacacccgtcatgaatacgagctctggagcaggacagacgggtccaaaccctggctccaccccgaccagctgcacgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa---gataataacatcacctgcctggtacaactgtATacttactcattcggtaagtattttctaagcacctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtgacagagctgcgtggaagctgacaggaggcccctctcgggaggtgacgcagaaactgggaccgggaaaatgacgcagggcccatgtgcggagacccagggaaggggaatgcaggcagcaggcgcagcacgggtaaggcccaaaggcgcga-CAGGGAGACTCCACTCACAGCTGGGCGCCCAGGAGTGCCGCCGGCTTCTGGtgtttt----gttttgttttttttttctttttttttttttttttttttttttgagatgaagtctcactctgccacccaggctggagtgcggtggtgtgatct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56915791 683 + 60714840 CCAAAGTGGTTTTCGGCAGGGATTATGAATTAGGTGTCCAGTGTGTAACACACAGAGACACCGTCTCGTTCTCTGTGTGAGAAGGA-GGGGTTGCGGCACACCCgtcatgaatacgagctctggagcaggagagacgggttcaaaccctggctccaccccgaccagctgcatgatcctgcccaagtcacatcgcttctctgtgactcagtttactccttgtaaaaaaaaaaaaaaaaa--ggataataacatcacctgcctggtacaactgtATAGTtactcattcggtaagtattttctaa--------------gcactggaaatacagggtggacagcacagccgaggccccgtccgtgtggaccggacattccagtgcagctgagagccacttccactcgtgagagaatctacccgtaacagagctgggtggaagctgacaggaggcccctctcaggaggtgacacagaaactgggaccgggaaaatgaggcagggcccacatgcggagacccagggaaggggaatgcaggcagcaggcacagcacaggtaaggcccaaaggcgggagcaggGAGACTCCACTCACAGCTGGGTGCCCAGGAGTGCCGCCAGCTTCTGttgtttt-------------------------gtttttggtcttttcttttttgagatgaagtctcactccgccacccaggctggagtgcagtggtgtgatct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103386706 674 - 106955855 CCGAAGTGGTTTTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACAC--ACACACCGTCTCGTTCTCTGTG---GGAGGA-GGGGTTGCAGCACACCCGTCCTgaatacgagctctggagcaggacagacggcttcaaaccctggctccaccccagccagctgcatgatcctggccaagtcacatcgcttctctgtgactcagtttactccttgttaaaaaaaaaa--------ggataacatcatcacctgcctggtacaactgtACAGttactcattcagtaagtattttctaagcacctgttactgggcactggaaatacagg-----------------------------gtggaccggacaTTCCAGTGCAGCTGAGAGCCACTTCCACTCGTGAGAGAATCTACCCGTGACAGAGCTGTGTGGAAGCTGACAGGAGGCCCCCCTCAGGAGGTGACGCAGAAACTGGGACCAGGAAAATGAAGCAGGGCCCACGTGCGGAGACCCAGGGAAGGGGAATGCAGGCAGCAGGCACAGCACGGGTAAGGCCCAAAGGCAGGAGCAGGGAGACTCCACTCACGGCTGGGCACCCAGGAGTGCCGCTGGCTTCTGTTGTTTGTTTGGTTTTGGtttttt--------cttctttttttttttttttttgagatgaagtctcactctgccacccaggctggagggcagtggtgtgatct i nomLeu3.chr10 C 0 M 1272 s rheMac3.chr19 60689523 671 + 64156825 CCGAAGTGGCTCTCAGCGGGGATCATGAATTAGGTGTCCAGTGCGTAACACACACAGACACCGTCCCGTTCTCTGTGTGAGAAGGt-ggggttgcagcacacctg--------------------------------agttcaaaccctggctccaaccagaccagctgcctgaccctggccaagtcacatcgcttctctgtgacgcagtttactcctcattagaaaaaaaaaaaa----ggataacagcatcacctgcctggtgcgactgtATAGttactcattcggtaagtattttctaagcatctattactgggcactggaaatacagggtggacagcacagccgaggccccgtccgcatagaccggacattccagtgcagctgagacccgcttccactcgtcagagaatctacccgtgacagagctgcatgggagctgacaggaggcccctctcaggagctgacacaaaagctgggaccaggaaaatgaggcagggcgcacgtgcggagacccagggaaggggaatgcaggtagcgggcacatcgcaggtgaggccccaaggcgggagcaggGAGACTCCACTCACAGCTGGGGACCCGGGAGTGCCGTCGGCTTCTGCTGTTTT----GGTTTGTT-------------Tttttctttttttttttttttgagatgaagtctcactctgccacccaggctggagtgctgtggtgtgatct i rheMac3.chr19 I 1362 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=44226.000000 s hg38.chr19_GL949753v2_alt 763652 91 + 796479 tggcccatggcccactgcaacctctaccgcctgggttcaggcgatt-------ctgctgcctcagcctcccgagtactgggattacaggtgcccgcca s panTro4.chr19 59964070 91 + 63644993 tggcccgtggcccactgcaacctctaccgcctgggttcaagcgatt-------ctgctgcctcagcctcctgagtactgggattacaggtgcctgcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916474 98 + 60714840 tggcccatggcccactgcaacctctaccgcctgggttcaagcgattctgctgcctgctgcctcagcctcccgagtactgggattacaggtgcccgcca i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60690194 84 + 64156825 -------tggctcactgcaacctctacagcctgggttcaaatgatt-------ctcctgcctcagcctcccgagtactgggattacaggtgcctgcca i rheMac3.chr19 C 0 I 1076 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I a score=108789.000000 s hg38.chr19_GL949753v2_alt 763743 436 + 796479 ccgcaccctgctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcccaggctggagtgcagtggcgcgatctcagctcacagcaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagcttaggcaattcgcccacctcggcctcccaaagtgctgggattgcaggcgtgggcc s panTro4.chr19 59964161 436 + 63644993 ccgcaccctgctaatttttgcatttttagtagagatggggtttcaccatcttggtcaggctggtcttgaattcttcacctcgtgatccacccgcctctgcctcccaaagtgcagggattacaggtgtgagccaccgcgcccagccTGtttttttttttttctttttatgagagggaagctcactcagtggcctaggctggagtgcagtggcgcgatctcagctcacaacaacctccgccgccagggctcaaacgatcctcccacctcagccttccacatagctg-aaccacaggcgcccgacaccacaagcagctacttttaaaattttttgtagaaatggggtttggctatgttgcttaggctggtctcgaatttctgagctcaagcaattcgcccacctcggcctcccaaagtgctgggattacaggcatgggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916572 424 + 60714840 ccgcacccggctaatttttgcatttttagtagagacggggtttcaccatcttggtcaggctggtcttgaattcttgacctcgtgatccacccgcccccgcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccTG-------Ctttttctttttatgagagggaatctcactcagtggcccaggctggagtgcagtggctcaacctcagctcactgcaacctccgccgccagggctcaaacgatcctcccaactcagccttccacatagctgaaaccataggcgcccgacaccacgagcagctacttttaaa--tttttgtagaaatggggtttggctatgttgcctaggctggtctcgaatttct--acctcagcaatccgcccacctcagcctcccaaagtgctggga-tacaggcatggg-c i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641103 43 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=17769.000000 s hg38.chr19_GL949753v2_alt 764179 54 + 796479 acagtgcctggccTGTTGTTTTGTTTATCTGGGAACTGCCTCAACTTTTttttt s panTro4.chr19 59964597 48 + 63644993 acagtgcctggtcttttgttttgtttATCTGGGAACTGCCTCAAC------ttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56916996 51 + 60714840 aca-tgcctggccTGTTG-TTTGTTTATCT-GGAACTGCCTCAACTTTTTTTTT i ponAbe2.chr19 C 0 I 803 s chlSab2.chr6 47641146 47 + 50890351 ACAGTGCCTGGCCTGTTGTCTTGTTTATCTGGGAACTGCCTCAACCt------- i chlSab2.chr6 I 43 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=37043.000000 s hg38.chr19_GL949753v2_alt 764233 137 + 796479 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcaggccgggcgtggtggctcacatctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtca s panTro4.chr19 59964645 137 + 63644993 ttttttttttttttggacacagggtctcaccccgagtgcagtggtacaatcaaagctcactgcagTccgggtgcggtggctcacatctgtaatcccagcactttgggagaccgaggcgggcagatcacctgaggtca i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641193 137 + 50890351 ttttttttttttttggacacagggtctcaccctgagtgcagtggtacaatcaaagctcactgcaggccaggcgcggtggctcacttctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtca i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13057.000000 s hg38.chr19_GL949753v2_alt 764370 138 + 796479 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggttg s panTro4.chr19 59964782 138 + 63644993 accagcctgaccaacatggtgaaaccctgtctctacctaaaacaaaaaagtAgccgggcatggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattatttgaaaccaggagatggaggtta i panTro4.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e chlSab2.chr6 47641330 12 + 50890351 I e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=19582.000000 s hg38.chr19_GL949753v2_alt 764508 74 + 796479 cagcctgaccaacaggaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg s panTro4.chr19 59964920 74 + 63644993 cagcctgaccaacatgaagaaaccccgtctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctg i panTro4.chr19 C 0 C 0 s chlSab2.chr6 47641342 74 + 50890351 cagcctgaccaacatgaagaaacgccgtctctattaaaaatacaaaattagccaggcatggtggcgcatgcctg i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e papAnu2.chr19 47939674 1261 + 51301725 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=13407.000000 s hg38.chr19_GL949753v2_alt 764582 26 + 796479 taatcccagctactcgggaggctgag s panTro4.chr19 59964994 26 + 63644993 taatcccagctactcgggaggctgag i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47940935 26 + 51301725 taatcccagttactcggaaggttgag i papAnu2.chr19 I 1261 C 0 s chlSab2.chr6 47641416 26 + 50890351 taatcccagttactcggaaggttgag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e nomLeu3.chr10 103387380 1272 - 106955855 M e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=236845.000000 s hg38.chr19_GL949753v2_alt 764608 317 + 796479 gcaggagaatcacttgaacccaggaggtggaggatgcc-----------------------gtgagccaagatcccgtcattgca--ccagcctgggcaacaagagcaaaactccgtctt--aaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcacgcctgcctcattgttttttatttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccacctcccgggttcacg----------------------c s panTro4.chr19 59965020 341 + 63644993 gcaggagaatcacttgaacccaggagatggaggatgctgaacccaggagatggaggatgcagtgagccaagatcccgccattgca--ccagcctgggcaacaagagcaaaactccgtctttaaaaaaaaaaaaaaaaaaaTCCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaagtagttgggactacaagtgcacaccatcatgcctgcctaattgttttgta-ttt----------tttttt----gagatggagtctcactctgtcacccaggctggagtgcagtggcgccatctcggctcactgcaagctccagctcccgggttcaca----------------------c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103388653 320 - 106955855 gcaggagaatcacttgaacccaggaggtggaggatgca-----------------------gtgagccaagatcccaccattgta--ccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaaaaaacaaa-aCctcactgcagcctcaacctcccaggctcaagcaatcctcccacctccacctcccaaatagttgggactacaagtgcacaccatcacgcctgcctaattgttttgtttttt----------tttttttttggagatggagtctcactctgccacccaggctggagtgcagtggcgccatctcggctcactgcaagccccacctcccgggttcaca----------------------c i nomLeu3.chr10 M 1272 C 0 s papAnu2.chr19 47940961 317 + 51301725 gcaggagaatcacttgaacccaggaggcggaggttgta-----------------------gtgagccgagatcctggcattgca--ccagcctgggaaacaagagcaaaactccgtctc--aaaaaaaaaaa---------cctcactgcagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtaggtgggactacaggtgcacaccatcatgtctgcctaattgttttttgtttttttgttttg-tttttt----gagacggagcctcgctctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctccctggttcagg----------------------c i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641442 339 + 50890351 gcaggagaatcacttgaacccaggaggcggaggttgca-----------------------gtgagccgagatcgtgccattgcactccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaa------------ctcactgtagcctcaacctcccaggctcaagcaatcctcccacctcagcctcccaagtagttgggactacaggtgcacaccatcacgcctgcctaattgttttttgtttttttgttttgttttttt----gagacggagtcacactctgtcgcccagactggagtgcagtggcgcaatctcagctcactgcaagctccacctcccaggttcaggccattctcctcccgggttcacac i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56917047 803 + 60714840 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=116073.000000 s hg38.chr19_GL949753v2_alt 764925 115 + 796479 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaattttttt-------------------------gtgtttcttagtagacacggggtttcaccgtgttggccaggatgg s panTro4.chr19 59965361 140 + 63644993 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacgcccggctaatttttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtttcaccgtgttggccaggatgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917850 115 + 60714840 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccaccaccatgcccggctaactttttt-------------------------gtattttttagtagacacggggtttcaccgtgttagccaggatgg i ponAbe2.chr19 I 803 C 0 s nomLeu3.chr10 103388973 115 - 106955855 cattctcctgcctcagcctcccaagtagctggg-ttacaggtgcccgccaccacacccggctaattttttt-------------------------gtattttttagtagacacagggtttcaccgtgttagccaggatgg i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47941278 115 + 51301725 cattctcctgcctcagcctcctgagtagctggaactacaggaacccgccaccacgactggctaattttttt-------------------------gta-tttttagtagagacggggtttcaccgtgttagccaggatgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47641781 116 + 50890351 cattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccactgcacccagctaatttttct-------------------------gtattttttagtagagacggggtttcaccatgttagccaggatga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I e rheMac3.chr19 60690278 1076 + 64156825 I a score=863411.000000 s hg38.chr19_GL949753v2_alt 765040 493 + 796479 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtga--------gcctg-cacgcctgcctgattgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCGGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAaac--tgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccgctgcacctggccTGCCCCAGTGTGGTAGAATACACACCACATAAAATGGACGATCTTCACTATTTTTAAATCCACTGCTGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGCTTTACTTAATCCTCTAGAG s panTro4.chr19 59965501 503 + 63644993 tctcgatctcctgaccttgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccg-cacgcctgcctgatcgttttgtattttttgtagagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTCTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGGAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccgggatgacaggcgtgaaccactgcacctggccTGCCCCAGtgtgatagaatacacaccacataaaatggaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGtcacagacacagctttacttaatcctctagag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56917965 502 + 60714840 tctcaatctcctgaccttgtgatccacccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcctg-caagcctgcctaattgttttgtattttttgtacagatgaggtcttgctatgttgcccaggctgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCCAGCCTGGTGCTGGAAAGAGCCACAGCTTCCAGCTTTGTCAGAGTGTCATGTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtgccaggataacaggcgtg-accactgcacctggccTGTCCaaatgtggtagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAAAGTCACAGACACAGTTTTACTTAATCCTCTAGAG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389088 505 - 106955855 tctcgatctcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgccca-caagcctgcctaattgttttgtattttttgtagagatgaggtcttgctatgttgcccagactgatctcaaactccCTGATAAACAAGGCTGTGGGTACCTGCTTCCTGGGGCTCTTTGCTTTGTGTTCTTTCTAGTCTGGAGCTGGAAAGAGCTACAGCTTCCAGCTCTgtcagggtgtcatctcacaaactgtgatcttcccaaaacttctgtctcccaaagtgccaggaagacaggcgtgagccactgcacctggccTGCCCaaatgtggaagaatacacaccacataaaatgtaccatcttcactatttttaaatCCACTGATGTCTTTATTCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGGTTTGCTAAAAAAAAGTCACAGACACAgctttacttaatcctctagtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691354 498 + 64156825 TctccatctcctgaccttgtgatccacccaccttggcttcccaaagtgctgggattacacgcgtgagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtgttgctctgttgcccaggctgatctcaaactccCTGGTGAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCTGCGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTgtgatcttcccaaagcttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcaccggaccTGCCCaaatgtggcagaatacacacgacataaagtgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCTGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i rheMac3.chr19 I 1076 I 72 s papAnu2.chr19 47941393 499 + 51301725 tctcgatctcctgaccttgtgatccacccacctcggcctcccaaagtgctgggattacacgcgtgagccaccacacccatcacGCCTGCCtaattgttttgtactttttgtggagatgaggtcttgctatgttgcccaggctgatctcaaactccctgaTAAACAAGGCTGTGGGCA----CTTCCTGGGGCTCTTTGCTTTGCGTTCTTTCTAGTCTGGCGCTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCA-CTCACAAACTGTGATCTTCCCAAAACTTCTgtttcccaaagtgccgggatcacaggcgtgaacccTTGCACCTGGCCTGCCCAAATGTGGCAGAATACACATGACATAAAATGCACCATCTTCACTATTTTTAAATCCACTGATGTCTTCACGCCTGGCTGTTGATCTTAGGAAAACACCAAAAAGCTGGTACTTGATTTGCT--AAAAATGTCACAGACACAGCTTTACTTCATCCTCTAGAG i papAnu2.chr19 C 0 I 71 s chlSab2.chr6 47641897 499 + 50890351 tctcgatctcctgaccttgtgatccgcccgccttagcctcccaaagtgctgagattacaggcatcagccaccgcgcccatcacgcctgcctaattgttttgtattttttgtagagatgaggtcttgctctgttgcccaggctgatctcaaactccCTGATGAACAAGGCTGTGGGTA----CTTCCTGGGGCTCTTTGCTTTGCATTCTTTCTAGTCTGGCACTGGAAAGAGCCACGGCTTCCAGCTTTGTCAGAGTGTCAGCTCACAAACTgtgatcttcccaaaacttctgtctcccaaagtg-cgggatcacaggcgtgaacccttgcacctggccTGCCCaaatgtggcagaatacacatgacataaaatgcaccatcttcactatttttaaatCCACTGATGTCTTCATGCCTGGCAGTTGATCTTAGGAAAACACCAAGAAGCTGGTACTTGATTTGCT--AAAAATGtcacagacacagctttacttcatcctctagag i chlSab2.chr6 C 0 I 72 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e macFas5.chr19 55829756 16 + 59248254 I a score=276317.000000 s hg38.chr19_GL949753v2_alt 765533 117 + 796479 Aggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggctggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaaccccgtctcta s panTro4.chr19 59966004 117 + 63644993 aggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtggccggatcatgaggtcaggagatcgagaccatcctggctaacacggt--gaaatcccgtctcta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918467 117 + 60714840 Aggccgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcatgaggtcaggagattgagaccatcctggctaacacggt--gaaaccccgtctcta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389593 117 - 106955855 aggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcggatcatgaggtcaggagattgagaccatcctggccaacacggt--gaaaccccgtctcta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60691924 117 + 64156825 Aggccgggcatggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacaaggtcaggagatcgagaccatcctggctaacccggt--gaaaccctgtctcta i rheMac3.chr19 I 72 C 0 s macFas5.chr19 55829772 117 + 59248254 Aggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacaccgt--gaaaccccgtctcta i macFas5.chr19 I 16 C 0 s papAnu2.chr19 47941963 119 + 51301725 cggccgggcgcggtggctcaagcctgtaatcccagcactctgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaatgcggtacgaaaccccgtctcta i papAnu2.chr19 I 71 M 2539 s chlSab2.chr6 47642468 117 + 50890351 Aggccgggcgcggtggctcaagcctgtaatcccagcacttagggaggcggaggcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacagt--gaaaccccgtctcta i chlSab2.chr6 I 72 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I a score=10881.000000 s hg38.chr19_GL949753v2_alt 765650 8 + 796479 gtaaaaaa s panTro4.chr19 59966121 8 + 63644993 gtaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918584 8 + 60714840 ctaaaaaa i ponAbe2.chr19 C 0 I 135 s nomLeu3.chr10 103389710 8 - 106955855 ctaaaaaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692041 8 + 64156825 ctaaaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829889 8 + 59248254 ctaaaaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642585 7 + 50890351 -ctaaaaa i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=227149.000000 s hg38.chr19_GL949753v2_alt 765658 173 + 796479 tataaaaaattagccgggcgtggtggcaggcgcctgtagtcccccgccactcgggaggctgaggcaggagaatggcatgaacccgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag--------aaaaaaaaaaaa-a s panTro4.chr19 59966129 142 + 63644993 tataaaaaattagccaggcgtggtggcgggcgcctgtagtcccccgccact--------------------------------cgggaggcggagcttggagtgagccgagatgt-gccactgtcctccagcctgggcgacaaagcaagataccgtctcag-------aaaaaaaaaaaaa-a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918727 172 + 60714840 tacaaaagattagccgggcgtggtggcgggcgcctgtagt-ccccgccacttggggggctgaggcaggagaatggcatgaacccgagaggtggagcttgcagtgagccgagatgt-gccactgcactccagcgtgggcgacagagcaagacaccgtctcaa--------aaaaaaaaagaa-a i ponAbe2.chr19 I 135 C 0 s nomLeu3.chr10 103389718 180 - 106955855 tataaaaaattagccgggcgtggtggcaggcgcctgtagt-ccccaccactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatgc-gccactgctctccagcctgggcgacagagcaggacactgtctcaaaaaaaaaaaaaaaaaaaaaa-a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692049 171 + 64156825 tacaaaaaactagccgggcgaggtggc-agcgcctgtagt-ccccgctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagctgagatccggccaccgcactccagcccgggcaacagagcgagactccatctcaa--------aaaaaaagaaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55829897 169 + 59248254 tacaaaaaactagccgggcgaggtggc-ggcgcctgtagt-cccaggtactcgggaggctgaggcaggagaatggcgtcaaccagggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgaga-tccgtctcaa--------aaaaaaa-aaaa-- i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642592 171 + 50890351 tacaaaaaattagccgggcgtggtggtgggtgcctgtagt-cccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagtttgcagtgagccgagatcacgccactgcactccagcttgggcaacagagcgaga--gagtctcaa--------aaaaaaaaaaaaa- i chlSab2.chr6 C 0 I 19 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=244087.000000 s hg38.chr19_GL949753v2_alt 765831 250 + 796479 CCcctctagagaatcccagaaaatagaagga---attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaggtgtgtccagccggGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGCCAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat s panTro4.chr19 59966271 253 + 63644993 cccctctagagaatcccagaaaatagaaggaattattattccatttcccggaagaggaacgtgtggctaagagaagaggcatcacctgcccaggTGTGTCCAGCCGGGGTCCT-------------------CACTGTCTCAGGGACCTCAGTGCTCCGGACACCTGTGTCCACAAGACAGAGACAGGATCAGAGGCGCCCTGGGTGggattgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56918899 267 + 60714840 aTCCTCTAGAGAATCCCAGAAAATAGAAGGA---ATTATTCCATTTCCCGGAAGAGGAACGTGTGGCTAAGAG--GAGGCATCACCTGCCCAGGTGTGTCCAGCCTGGGTCCTCGCTGCTCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGCCACCTGTCTCCACAAGCCAGAGACAGGATCAGAGGCGCCCCGGGTGGGACTGCCTGGGACAGTGTGCATGAAGGTGACAGTGATgtacctggtacacagcaggtgcttaat i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103389898 268 - 106955855 atcttctagagaatcccagaaaatagaatt----attattccatttcccggaagaggaacgtgtggctaagagaggaggcatcacctgcccaagTGTGTCCAGCCTGGGTCCTCGCTGCCCACAAGGCCCTGCACTGTCTCAGGGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAAGATCAGAGGCGCCCTGGGTGggactgcctgggacagtgtgcatgaaggtgacagtgctgtacctggtacacagcaggtgcttaat i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692220 198 + 64156825 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCAGCCTGCATCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGACAGGAGGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55830066 198 + 59248254 -------------------------------------------------------------------------aGGAGGCATCACCTGCCCAGGTGCATCCACCCTGGGTCCTTGCTGCCCACAAGGCCCTGCACTGTCTCA-GGACCTCAGTGCTCTGGACACCTGTCTCCACAAGCCAGAGATAGGATGAGAGGCGCCCCGGGCGggattacctcggacagtgtgcatgaaggcaacagtgctgtacctggtacacagcaggtgcttaat i macFas5.chr19 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 56831 218 + 138250 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=553585.000000 s hg38.chr19_GL949753v2_alt 766081 388 + 796479 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCGTAGTGCCTCTCACCTACCCGACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT------------atgaatgaatgaatgaaccaacgaatg------------tgcacctgcacctgcctccctagggctgtgagtggcacaaggacagctctggttcatctcacacctccagcacct-ggtcaggtctgagatcacgtctgctaaataaatgaGGTCCCACAACTCCCCCATTCCTTGTTCATTTCCTGAGTACCCGTTTACTGAGCGGGGCACATTGACTCTGAAGAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC s panTro4.chr19 59966524 378 + 63644993 aaatgTT-CATCCACCTCTGAGACTCTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCTACCCGACAA------------------TCTTGATCCCCAAGGGCACAGCAGGGG-CTCAGT--------atgaatgaatgaatgaatgaaCCAACAAACG------------TGCACCTGCACCTGCCTCCCTAGGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCCCGTTCCTTGTTCATTTCCTGAGTACCTGTTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919166 347 + 60714840 aaatgtt-cattCACCTCTGAGACTCTGAGGCATTGC---------------------------------CCTCTCACCTACTCCACAACAGTGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------ATGAATGAATGAATGAACC--------------------TGCACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCC-GGTCAGGTCTGAGATCACATCTGCTAAATAAATGAGGCCCCACAACTCCCATTTTCCTTGTTCATTTCCTGAGTACGCTTCTACTGAGCAGGGCACATTGACCCTTAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAAGAAAC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390166 407 - 106955855 aaatgTT-CATCCACCTCTGAGA--CTGAGGCATTGCCCTCTCACTGTTCTTTGTGATCTCACCATAGTGCCTCTCACCT---CCACAACAGCGCCG----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAATatgaatgaatgaatgaatgaatgaatgaacgaacgaatgaaCGAACAAACCTACACCTGCACCTGCCTCCCTATGGCTGTGAGTGGCACAAGGACAGCTCTGGTTCATCTCACACCTCCAGCACCT-GGTCAGGTCTGAGATCACGTCTGCTAAATAAATGAGGTCCCACAACTCCCTCTTTCCTTGTTCATTTCCTGAGTACCCATTTACTGAGCGGGGCACATTGACTCTGAACAAGAAAGCTTTGGCCCCTT-CAGTGCCAGACTAGAAAAGAAAC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60692418 396 + 64156825 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTTCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT------------atgaatgaatgaatgaatgaatgaatgaatgagcgaatCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACAAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATCGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i rheMac3.chr19 C 0 I 37 s macFas5.chr19 55830264 404 + 59248254 aaatatt-catCCACCTCTGAGACTCTGAGGC--TGT--TCTCACTGTCCTTTGTGATCTCACCATAGCGCCTCTCACCTACTCCACAACAGCGCCA----GCTCTTTCTTGATCCCCAAGGGCACAGCAGGGG-CTCAAT----atgaatgaatgaatgaatgaatgaatgaatgaatgaatgaGCGAATCTGCACCTGCACCTGCCTCCCTATGGCTATGAGTGGCACGAGGACAGCTCTGGTTCACCTCACACCTCCAGCACCT-GGTCAGGTCTCAGATTGCCTTTACTAAATAAATGAGGTCCCACAACTCCCCCTTTCCTTGTTCATTTCCTGAGTACCCGTTAACTGAGTGGGGCACATTGACTCCGAACAAGAAAGCTTTGGCCCTTT-CAGTGCCAGACTAGAAAACAAAC i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57049 356 + 138250 aaaCGTTACACCCACCT--------CTAAGGCATCACCCTCTCCCTGTTCTTTGTGATCTTACCACAGCGCCTCTCGCCTACTCCACAACATCCACAGTGCGCTCCCTCTTAATCCCCAAGGGCACAGGAGGGGACTCAAC------------ACGTGTGAATGAGTGA------------------------GCGCCTGCgcctgcctccctacagctgtgagtggcacgaggacagctttagttcatctcacacctccagcacctgggtcaggtctcagatcacgtttgctaaataaatgaGGTCCCACAACACCC-CATTCTTCGTCCACTT---------------ACTGAGCAGGGCACATCGACTCTGACCAAGAAAGCTTTGGCCCTTTCCAGTGCCAGACAAGGAAAC---- i calJac3.chr22_GL285922_random I 218 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=8955.000000 s hg38.chr19_GL949753v2_alt 766469 9 + 796479 AAAGCAgct s panTro4.chr19 59966902 9 + 63644993 AAAGCAgct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919513 9 + 60714840 AAAGCagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390573 9 - 106955855 AAAGCAgct i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830668 9 + 59248254 AAAGTAgcc i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 57405 9 + 138250 AAAGGGGTC i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e chlSab2.chr6 47642763 19 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=53888.000000 s hg38.chr19_GL949753v2_alt 766478 38 + 796479 gggcatggtggctcatgcctgtaatcccagcactttgg s panTro4.chr19 59966911 38 + 63644993 gggcatggtggctcatgcctgtaatcccagcactttgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919522 38 + 60714840 gggcgcggtggctcacgcctgtaatcccagcactttgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390582 38 - 106955855 gggcgtggtggctcacgcctgtaatcccagcactttgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55830677 38 + 59248254 gggcgcggtggctcacacctgtaatcccagcactttgt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642782 38 + 50890351 gggcacagtggctcacacctgtaatcccagcactttgg i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 57414 25 + 138250 GGGCACGGT-GCTCATGCCTATAATC------------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60692814 37 + 64156825 I a score=227546.000000 s hg38.chr19_GL949753v2_alt 766516 118 + 796479 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcacccgcctata s panTro4.chr19 59966949 118 + 63644993 gaggctgaggcaggcggatcacaaggtcaggaattcgagaccagcctggccaacatagtgaaaccccgtctctattaaaaatacaaaaattagccgggcatggtggcacacgcctata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919560 118 + 60714840 gaggctgaggcgggcggatcacaaggtcaggaatacgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgcacacctata i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103390620 118 - 106955855 gaggctgaggcggacagatcacaaggtcaggagttccagaccagcctgaccaacatagtgaaaccccatctctactaaaaatataaaaattagctgggcatggtggcacacacctata i nomLeu3.chr10 C 0 M 2381 s rheMac3.chr19 60692851 118 + 64156825 ACgactgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctctactgaaaatacaaaaatgagccagccatggtggcacacgcctata i rheMac3.chr19 I 37 C 0 s macFas5.chr19 55830715 118 + 59248254 gaggccgaggcagggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaatgagccagccatggtggcacacgcctata i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642820 118 + 50890351 gaggctgaggcgtggggatcacaaggtcaggagttcaagaccagcctggccaacatagtgaaaccccatctctactaaaaatacagaaatgagccagccatggtggcacacacctata i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57439 79 + 138250 --------------------------------------gaccagcctggccaaaacagcaaaa-cccatctctactaaaaacacaaaaatcagctgcgcgtggtggtgggcgcctgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e papAnu2.chr19 47942082 2539 + 51301725 M a score=92130.000000 s hg38.chr19_GL949753v2_alt 766634 56 + 796479 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggctgcagt s panTro4.chr19 59967067 56 + 63644993 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggctgcagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919678 56 + 60714840 --------gtcttgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60692969 56 + 64156825 --------gtctcgggaggctgaaggaggagaatcgcttgaacccaggaggcggaggttgcagt i rheMac3.chr19 C 0 M 558 s macFas5.chr19 55830833 56 + 59248254 --------gtctcgggaggctgaaggaggagaatcacttgaacccaggaggcggaggttgcagt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642938 56 + 50890351 --------gtctcgggaggcttaggtaggagaatcgcttgaacccaggaggcggaggttgcagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57518 64 + 138250 agcccagctactcggaaggctgaggcaggagaattgctcaaactcaagaggtggacgctgcggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=65810.000000 s hg38.chr19_GL949753v2_alt 766690 65 + 796479 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag s panTro4.chr19 59967123 65 + 63644993 gagccaagatcgcatcattgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919734 65 + 60714840 gagccaagattgcgtcactgcactctagcctgggtgacag-agcaagactccatctc-------------aaaaaaa----------------ag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830889 81 + 59248254 gagccgagatagtgtcactgcactccagcctgggtgacag-agcaagactccatctc-------------aaaaaaaaaaTTGGTAAgaggccag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47642994 94 + 50890351 gagccaagatctcgtcactgcactatagcctgggtgacag-agcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaaTTGCTAAgaggccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57582 66 + 138250 gagcagagatcacgccactgcactccagcctggacagcagcagcaaaactccatctc-------------aaaaata----------------aa i calJac3.chr22_GL285922_random C 0 I 66 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=115958.000000 s hg38.chr19_GL949753v2_alt 766755 147 + 796479 gtcttgctctgtcatccaggttagagtgcagtggcacaaatacggctcactgcagccttgaactctcgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgtaggcacatgccaggatgcccggctaatttttt s panTro4.chr19 59967188 134 + 63644993 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcttgcctcagcctcctgagtagctgggactgt-----------aggatgcccggctaa--tttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919799 147 + 60714840 gtcttgctctgtcatccaggttagagtgcagtggcacaaacacggctcactgcagccttgaactcccgggctcaagtgatcctcctgcctcggcttcatgagtagctgggactataggcacaggccaggatgcccggctaatttttt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55830970 147 + 59248254 gtcttgctctgtagtccaggttagtgtgcagtggcacaaacacggttcactgcagccttgaactcctgggctcaagcaatcctcctgcctcagcctcctgagtagctggggctataggcacacgccaggatgcccggctaatttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643088 147 + 50890351 gtcttgctctgtcgtccaggctagagtgcagtggtgcaaacacggctccctgcagccttgaactcccaggctcaagcgatcctctggcctcagcctcctgagtagctggggctataggcacacgctaggatgcccagctaatttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693025 558 + 64156825 M a score=10920.000000 s hg38.chr19_GL949753v2_alt 766902 8 + 796479 tttttttt s panTro4.chr19 59967322 8 + 63644993 tttttttt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919946 8 + 60714840 tttttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693583 8 + 64156825 TTTttttt i rheMac3.chr19 M 558 C 0 s macFas5.chr19 55831117 8 + 59248254 tttttttt i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643235 8 + 50890351 tttttttt i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M a score=278341.000000 s hg38.chr19_GL949753v2_alt 766910 354 + 796479 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctgagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatttgaggtaatgcatatgttaattagcttgatttagccattctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTATAAACAAGACTAGAAAG--A s panTro4.chr19 59967330 353 + 63644993 t----aatctttggtacacacaaggtctcactatgcttcctaggctggtctc-taactcctaagctcaagcaatcctaagagaagagattttaaatgtggtcaccacaaaaaca-g-----taagtatttgaggtaatgcatatgttaattagcttgatttagccgttctacaatgtatacaatgtacatcatgctgtacataatatatacaagtatacatgtcaactaaacaataaaTAATTTTAGTGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGGATGGTCCCAGTTTTACATAAAAATATATAAAT--ACACACACAAACCTATTAGAAACAAGACTAGGAAG--A i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56919954 348 + 60714840 ttttaaatgtttggtactcacaaggtctcactatgcttcctaggctggtctcttaactcctgagctcaagcaaACctaagagaagagattttaaatgtggtcaccacaaaaacagg-----taagtatctgaggtaatgcatatgttaattagcttgattgagccactctacaatgtatacaatgtacatcatgttgtacataatatatacaagtgtacatgtcaactaaacaaTCAATAATTTTAATGTATTCTTGAGTCTATTTAAAGATGACCAAGAATAGAAAAGCtagaggatggtcccaattttacataaaaatatataaat--acacacac-------------acaagactggaaagaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60693591 361 + 64156825 t----aatctttggtacacacaaggtctcactatgcctcctacgctggtctc-taactcctgagctcaagcaatcctaagagaagagattgtaaatgtagtcaccacaaaaacaggtaatataagtatttgaggtaatgcatatgttaattagcttgatttagtaattctacaatgtatacaatgtacatcatgttgtacgtaatatatacaagtgtacctgtcaactaaacaataaaTAATTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTAGAGTATGGTCCCAGTTTTACATGAAAATATATAAATTCACACACACAAACCAATTAGAAACAAGACTGGAAAG--A i rheMac3.chr19 C 0 M 2020 s chlSab2.chr6 47643243 347 + 50890351 -----aatctttggtacacacaaggtctcactatgcttcctacactggtctc-taactcctgagctcatgcaatcctaagagaagagattgtaaatgtggtccccacaaaaacagg-----taagaatttgatgtaatgcatatgttaattagcttgatttagtaattctacagtgtatacaatgtacatcatgttgtacgt----tatacaagtgtacatgtcaactaaac----aataaTTTTAATGTATTCTTGAGTCTATTTAAAGATGAACAAGAATAGAAAAGCTGGagtatggtcccagttttacataaaaatatataaattcacacacacaaaccaattagaaacaagactggaaag--a i chlSab2.chr6 C 0 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C a score=28204.000000 s hg38.chr19_GL949753v2_alt 767264 58 + 796479 TCCA---------TAAAAGTGATTCTCCTGGGGCTGGTGCAGATCAAAGttgtttagttctgtcttc s panTro4.chr19 59967683 58 + 63644993 TCCA---------TAAAACTGATTCTCCTGGGGCTGGTGCAGATCAAAGGTGTTTAGttctgtcttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920302 58 + 60714840 tcca---------taaaagtgattctcctggggttggtgcagatcaaaggtgtttAGttctgtcttc i ponAbe2.chr19 C 0 C 0 s chlSab2.chr6 47643592 67 + 50890351 tccatcaaaactttaacagtgattctcctggggttggtgcagatcaaaggtgtttagttctgtcttt i chlSab2.chr6 I 2 I 2 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e macFas5.chr19 55831125 0 + 59248254 C e rheMac3.chr19 60693952 2020 + 64156825 M a score=141911.000000 s hg38.chr19_GL949753v2_alt 767322 188 + 796479 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcaccaccacgcctggctaa-tttttgta-tttttagtagagacagggtttc s panTro4.chr19 59967741 188 + 63644993 ttttttattgagacagagtctcactctgtcacccaggctggagtgcactggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcaccctgagtagctgagattacaggtgtgcatcaccacgcctggctat-tttttgta-tttttagtagagacagggtttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56920360 188 + 60714840 ttttttattgagacagagtctcactctgtcacccaggctaaaatgcagtggcacagtctcagctcaccgcaacctccgcctcccgggttcaagcaattctcctgcctcagcaccctgagtagctgggattacaggcgtgcaccaccatgcctggctaa-tttttgta-tttttagtagagacagggtttc i ponAbe2.chr19 C 0 M 668 s macFas5.chr19 55831125 190 + 59248254 tttttttttgagactgagtcttgctctgtcacccaggctagagtgcagtggccagatctcagctcactgcaagctccgcctcccgggtttacgccattctcctgcctcagcctctcgagtagctgggactacaggcgcccgccacctcgcccggctagttttttgtattttttagtagagacggagtttc i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643661 188 + 50890351 cttttttttgagacgaagtcttgctctgtcacctaggctggaatgcagtggtgtgatctcagctcactgcaacctccgcctcccggcttcatgccattctcctgcctcagcctcccaagcaggtgggattacaggtgtgcaccaccacacccggctaa-tttttgta-tttttagtagaaacagggtttc i chlSab2.chr6 I 2 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=8283.000000 s hg38.chr19_GL949753v2_alt 767510 15 + 796479 accatgttggccagg s panTro4.chr19 59967929 15 + 63644993 accatgttggccagg i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831315 15 + 59248254 accatgttagccagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47643849 15 + 50890351 accatgttggccagg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e calJac3.chr22_GL285922_random 57648 66 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=226360.000000 s hg38.chr19_GL949753v2_alt 767525 310 + 796479 ctggtctcgaactcctgacctcaagggatccacctgcctcagcctcccaaagtgctgggattaacaggcgtgagccactgtgcccagccAGTTCTGTCTTCTTTACATTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagctgacctgggtggatcacttgagccc----------------------------------------------------------------------aggagttggagaccagcctgagcaacatggtgaaaccccagctct s panTro4.chr19 59967944 379 + 63644993 ctggtctccaactcctgagctcaagtgatccacccaggtcggcttcccaaagtgctgggatt-acaggtgtgagccaccgtgcccagccAGTTCTGTCTTCTTTACACTGCAGTATTTTATAAATGTCCCATAACAAACACATATTTCTTTAACCATGGTGGGGAAGGCACTTGATCAATAAATGCTTAATAAggtcaggtgcggtggctcacgcctgtaatcccagcactgtgggaagccgacctgggtggatcacttgagcccaggagttggagacaagcctgagcaacatggtgaaaccccagctctaaaaacaaaacaaaannnnnnnnnnaggagttggagacaagcctgagcaacatggtgaaaccccagctct i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831330 309 + 59248254 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccactgcgcctggccagttctgtcttctttACACTGCAGTATTTTATAAATGTCCCATAACTAACACATATTTATTTAACCATGGTGGGGAAGGTACTTGATCAATAAATGCTTAATAAggccgggcacagtggctcaagcctgtaatcccagcactgtgggaagccaaggcaggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatggtgaaaccccagctct i macFas5.chr19 C 0 I 190 s chlSab2.chr6 47643864 309 + 50890351 ctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggatt-acaggcatgagccaccgcacccagccagttctgtcttctttacactgcaatattttataaatgtcccataactaacacatattTATTTAACCATGGTGGGTAAGGTACTTGATCAATAAATGCTTAATAAggccgggcgcagtggctgaagcctgtaatcccagcactgtgggaggccaaggcgggtggatcacttgagccc----------------------------------------------------------------------aggagtttgaaaccagcctgagcaacatgatgaaacaccagctct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 57714 295 + 138250 ctggtactgaactcctgacctcgagggatccaaccacctcagcctcccaaaatgctggcatt-acaagcgtgagccactgcgcccaaccAGTCCTGTCGTCTTTGCACTGCAGTATTTTATAAATGCCCCATAACAGACACTTATTTCTTTAACCATGGTGGGGAAGACACTGGATCCATAAGCACTTAATAAggccgggcgcggtggctcaagcctgtaatcccagcaatttg-------------ggtggatcagttgagccc----------------------------------------------------------------------aggagtttgagaccagcctgagcaacatagtgaaac-ccaactct i calJac3.chr22_GL285922_random I 66 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=910.000000 s hg38.chr19_GL949753v2_alt 767835 1 + 796479 a s panTro4.chr19 59968323 1 + 63644993 a i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831829 1 + 59248254 a i macFas5.chr19 I 190 C 0 s chlSab2.chr6 47644173 1 + 50890351 a i chlSab2.chr6 C 0 I 982 s calJac3.chr22_GL285922_random 58009 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=1526.000000 s hg38.chr19_GL949753v2_alt 767836 15 + 796479 -aaaacaaaacaaaac s panTro4.chr19 59968324 15 + 63644993 -aaaacaaaacaaaac i panTro4.chr19 C 0 C 0 s macFas5.chr19 55831830 14 + 59248254 -aaaaaaaaaaaaag- i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58010 11 + 138250 caaaaaaaatt----- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e papAnu2.chr19 47942082 2539 + 51301725 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=52397.000000 s hg38.chr19_GL949753v2_alt 767851 116 + 796479 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcagtgagccatgac s panTro4.chr19 59968339 116 + 63644993 ---aataaaacaataatta--gctgtgtgtggtggcgtatgcctgtactcccagctacttgggaggctgaagtgggaggatcccttgagcccagcaggttgagactgcactgagccatgac i panTro4.chr19 C 0 I 162 s macFas5.chr19 55831844 109 + 59248254 ---aaaaaatta---------gccagatgcggtggtgtgcttccatagccccagctactcaggagtctgaggcaggaggatcacttgagcccaagaggtcaaggctgcagggagctgtgtt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944674 101 + 51301725 ---aacaaactaattattcaggccgggcgtggtggctcacgcctgtaatcccagcactttgagaggcagaggcaggaggatcacttgaggtcaggagttcgaga----------------- i papAnu2.chr19 M 2539 C 0 s calJac3.chr22_GL285922_random 58021 112 + 138250 tttttaaaatta---------gctgtgtgtggtggcataagcctgtacacccagctacttgggaggctgaactgggaggatcacttgagcccagcaggttgagactgcagtgagccctgac i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=124886.000000 s hg38.chr19_GL949753v2_alt 767967 319 + 796479 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaaCTAATTATTCAGGTAgggcacggtggctcacacctgtaatcccagcactttgggaggccaagggaagcagatcacctgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag s panTro4.chr19 59968617 315 + 63644993 tgcaccactgca-ctctagcctgggtgaca----gagatggatcctgtctc--aaac-aaa----TTATTCAggcagggcgtggtggctcacacctgtaatcccagcactttgggaggccgagggaagcagatcacttgaggtcaggagttcgagac-------------------------------cagcctgaccaacatggtgaaaccctgtctctacct------------aaaacacaaaaaatt--agccaggcacggtggcgggtgcctgtaatcccagctactca--------ggaggctgaagcaggagaatcatttgaaatcgggagacggaggttgcagtgaggcaagatcacaccactgcactccag i panTro4.chr19 I 162 C 0 s macFas5.chr19 55831953 315 + 59248254 tgtgccactgca-ctccagcctgggtgaca----gagacagaccctgtctc--aaaC-TAACTAATTATTCAggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggcagaggcaggaggatcacttgaggtcaggagttcgagat-------------------------------cagcctgaccaatgtggtgaaacc--gtctctacct--------------aaaacaaaaaatt--agccaggcatggtggcaggtgcctgtaatcccagctactca--------gggggctgaggcaggagaatcatttgaaaccaggagatggaggttgcagtgaggcaagatcacaccacagcactccag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47944775 305 + 51301725 ---------------ccagcctgaccaacatggtgaaactgtctctatcta--aaacacaaaaaatta-----gccaggcatggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcatttgaaaccaGGAGATGGCGGTTGCAGtga----------caccatggcactccagcctgggcaacacagcgagact--tcgtctgtctcaaaacaaacaaacaaaacataaagtc--agcggggtgcagtggctcacgcctgtaatcccagcactttg--------ggaggctaaggcagatggatcacctgaggtcaggagttcgaga-------------------------------ccag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58133 315 + 138250 --------tgcacctccagcctgggtgaca----gagcaagaccctgtctcaaaaac-aaaaaaTtta-----gccaggttcggtggcttctatctatagccccagctactcaggaggctgaggcaggaggatcgcttgagcccaggagatcaaggctgcagggagctgtgtctgtgccactgcactctagcctgggtgacagagacagacc------ctgcct----------caaaaaaaCTAATTATTCAgaccgggtatggtggttcatgcctgaaatcccagcacttcagcactttgggaggccaaggcaggaggaccacctgaggtcaggaatttgaga-------------------------------gtag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e ponAbe2.chr19 56920548 668 + 60714840 M e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=143688.000000 s hg38.chr19_GL949753v2_alt 768286 184 + 796479 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccacgcctgtaatcccagcactctgggaggctgaggcaggagaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccccgtctctactaaaa---atac s panTro4.chr19 59968932 184 + 63644993 cctgggcaacagagcgagaccccatctgt-ctcaaaacaaacaaacaaaac--aaaGTCAgccgggcgcagtggcccatgcctgtaatcccagcactttgggaggttgcggcaggtgaatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacgtggtgaaaccctgtctctactaaaa---atac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921218 186 + 60714840 CCTGGGCAACAGAGCAAGACTCCGTCTGT-CTCAAAACAAACAAACaaaacataaagtcagccgggcacagtggctcatgcctgtaatctcagcactttgggaagccgaggcaggtggatcacctgaggtcaggagttccaga-------------------------------ccagcctggccaacatggtgaaaccccgtctctactaaaa---atac i ponAbe2.chr19 M 668 C 0 s macFas5.chr19 55832268 185 + 59248254 cctgggcaacacagcgagacttcatctgt-ctcaaaacaaacaaacaaaacataaaGTCAgcggggtgcagtggctcacgcctgtaatcccagcactttggaaggctgaggcagatggatcacctgaagtcaggagtttgaga-------------------------------ccagcgtggctaacgtggtgaaaccccgtctctactaaaa---ata- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945080 175 + 51301725 cgtggctaacgtggtgaaaccccgtctctactaaaaataaa------------aaatttggccaggcgcagtggctcaagcctgtaatcccagcactttgggaggccgagacgggtggatgac--aaggtcaggagatagaga-------------------------------ccatcctggctaacccggtgaaaccccgtctctactaaaaaataca- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 58448 195 + 138250 cctgaacaacgtggagaaaccccatctctactaaaaatacaa-----------gaaattagctaggtgtggtggcacataactgtagtcccagctactcggaaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagaacaagattccgtctc--------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47644174 982 + 50890351 I e rheMac3.chr19 60693952 2020 + 64156825 M a score=112592.000000 s hg38.chr19_GL949753v2_alt 768470 116 + 796479 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggctgaggtccg-----cgcttgaacccaggaggcagaggttacagtgagccgagatcgcgccattgcact s panTro4.chr19 59969116 89 + 63644993 aaaaattagcagggtatggtagcaggcatct-taatcccagctactcaggaggc--------------------------------agaggttacagtgagccgagattgcgccattgcact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921404 116 + 60714840 aaaaattagcagggtatggtagcaggcatct-taatcccagttactcaggaggctcaggtccg-----tgcttgaacccaggaggcagaggttacagtgagccgagatggcgccgttgcact i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55832453 111 + 59248254 aaaaattagcagggtgtggtggcgggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccgggaggcagaggttccagtgagccgagatcgtgccgttgcact i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47945255 122 + 51301725 aaaaactagcccggcaaggtggcgggcgcctgtagtcccagctactcgggaggctgaggcagaagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcacgccactgcact i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47645156 111 + 50890351 aaaaattagcagggtgtggtcacaggcacct-taatcccagctactcaggaggctgtg----------cgcttgaacccaggaggcagaggttccagtgagccaagatcgtgccgttgcact i chlSab2.chr6 I 982 I 1 s calJac3.chr22_GL285922_random 58643 92 + 138250 -aaaaaTAgctgggcgcggtggctcatgcctgtaatcctagcactttgggaggccgagg---------tgggtggatc-----agcagaggt--caggagttcaagacc------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60693952 2020 + 64156825 M a score=420257.000000 s hg38.chr19_GL949753v2_alt 768586 197 + 796479 cagcctggccgacagagtgagactccctctc-aaaat----------------aacagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT s panTro4.chr19 59969205 197 + 63644993 cagcatggctgacagagtgagactccctctc-aaaat----------------aatagta-gtaataaat--------aaataaaGtcgttgcttgcaggctgtac-aaaaaaaggcagcaactggacttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921520 201 + 60714840 cagcctggccaacagagtgagactccctctc-aaaat----------------aataata-gtaataaat----taacaaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcaactggatttggcccctaactcatagtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTTCTCAGAGCCTGGCCCTGGGAGCCGCCTATCCCAGT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696027 205 + 64156825 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaaCAAATGAATAAAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTCCCAGT i rheMac3.chr19 M 2020 C 0 s macFas5.chr19 55832565 205 + 59248254 cagcctggccgacagagtgagactctgtctc-aaaaa----------------aataata-ataataaacaaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTTCATTCACTCCTCAGAGCCTAGCCCTGGGAGCCGCCTCTGCCAGT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47945378 204 + 51301725 cagcctggccgacagagtgagactctgtctc--aaaa----------------aataata-ataataaataaatgaataaataaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctgGATTTGGCCCCTAGCCCATGGTTTGCCAAAACTCTGCTCTGAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTGCCAGT i papAnu2.chr19 I 1 C 0 s chlSab2.chr6 47645268 221 + 50890351 cagcctggccgacagagcgagactctgcctc-aaaaaaataaataataataataataata-ataaaaaataaatgaataaAtaaagtcattgcttgcaggctgtac-aaaaaaaggcagcagctggatttggcccctagcccatggtttgccaaAACTCTGCTCTAAAGTTTGCTTGCTCCATTCACTCCTCAGAGCCTGGCCCTGGGAGCCGCCTCTCCCAGT i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 58735 205 + 138250 -agcctggccatcatggtgaaaccccatctttaaaaa----------------aaaAATACATAATAAATAaa-aaatgaaaatagtcatagcttgcaggctgtacaaaaaaaaggcagccactggatttggcccctgggccacagttcaccaaAACTAAGCTCTAAAGCTTACTCGGTTCATTCACTCCTCAGAGCCTGCCCCCGGGAGCCGCCCAT-CCAGA i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20132918 2038 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=257111.000000 s hg38.chr19_GL949753v2_alt 768783 88 + 796479 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG s panTro4.chr19 59969402 88 + 63644993 CCTCATCCCACATGGCCAGCGTT----CTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATAGACTTGAGGGAAGCCAAGTCCAGGTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921721 91 + 60714840 CCTCATCCCCCATGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTTGCTGCAAACTCTCGGATGGACTGGAGGGAAGCCAAGTCCAGGTG i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696232 91 + 64156825 CCTCATCCCACACAGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55832770 91 + 59248254 CCTCATCCCACACGGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945582 92 + 51301725 CCTCATCCCACACGGCCAGCATTCTCCCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i papAnu2.chr19 C 0 I 226 s chlSab2.chr6 47645489 91 + 50890351 CCTCATCCTACACCGCCAGCGTTCT-CCTCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGGGAAGCCAAGTCCAGGTG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 58940 88 + 138250 CCTCATCGCACAAGGCCAATGTT----CTCCTACCTTCACTGATCTTCGCTGCAAACTCCCTGATGGACTTGAGGGAGGCCAGGTCCAGGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20134956 92 - 122678785 CCTCGCCCCACAAGGCCAGCATCCTCCCGCCTACCTTCAATGATCTTCGCTGCAAACTCTCGGATGGACTTGAGAGAGGCCAAGTCCAGGTG i canFam3.chr1 I 2038 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=423390.000000 s hg38.chr19_GL949753v2_alt 768871 140 + 796479 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac s panTro4.chr19 59969490 140 + 63644993 CCGGGCGTTGACATGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCtcctgaaaacccaggatggaaaaagatttaaattaataatccac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921812 140 + 60714840 CCGGGCGTTGACGTGGTGATTGAGGGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCcaggatgatgttgcctcctgaaaacccaggatggaaaaagatttaaattaataatccac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60696323 140 + 64156825 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCAC i rheMac3.chr19 C 0 I 3813 s macFas5.chr19 55832861 140 + 59248254 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47945900 140 + 51301725 CCGGGCGTTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAATAATCCac i papAnu2.chr19 I 226 C 0 s chlSab2.chr6 47645580 140 + 50890351 CCGGGCATTGACGTGGTGATTGAGAGTCTCCCCGCGGATGTCCTTTGCTGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGATGTTGCCTCCTGAAAACCCAGGATGGAAAAAGATTTAAATTAataatccac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 59028 140 + 138250 CCGGGCATTCACATGGTGATTGAGGGTCTCCCGGCGGATGGCTCTGGCCGCCGCCTCACACTTCTCCATGTCTCGGCAGGCCAGGATGACGTTGCCTCCTGAAAACCCGGGATAGAAAAAGGTTTATGTTAACAACccac i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135048 139 - 122678785 CCAGGCACTGACACGGTGATTAAGGGTTTCCCCACGAATCTCCTTTGCCGCTGCCTCACACTTCTCCATATCTCGACAGGCCAGAATGATGTTGCCTCCTGGAAGCCCGGGATAGGAAAAAA-CTAATTTTTCAATCCTC i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M a score=6925.000000 s hg38.chr19_GL949753v2_alt 769011 6 + 796479 tcctgg s panTro4.chr19 59969630 6 + 63644993 tcctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921952 6 + 60714840 tcctgg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55833001 6 + 59248254 gcctgg i macFas5.chr19 C 0 M 23308 s papAnu2.chr19 47946040 6 + 51301725 gcctgg i papAnu2.chr19 C 0 I 2465 s chlSab2.chr6 47645720 6 + 50890351 gcctgg i chlSab2.chr6 C 0 I 2646 s calJac3.chr22_GL285922_random 59168 6 + 138250 tcctag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135187 5 - 122678785 GCCCA- i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=43160.000000 s hg38.chr19_GL949753v2_alt 769017 83 + 796479 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc s panTro4.chr19 59969636 83 + 63644993 gtactgaccccagagac--atgaaaacat-------------acgtctacacaaaaacacatccaccaatgttcactgcggcattcttcacaaaagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56921958 83 + 60714840 gtactgaccccagagaa--atgaaaacat-------------acgtctacacaaaaacacgtgcgccaacgttcactgcggcattcttcacaagagcc i ponAbe2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59174 95 + 138250 atactgaccctggagaa--atgaaaacatttttacacaaaacacgtctacacaaaagcacatgcaccaatgttcgc-atggcgttcttcacagaagcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135192 85 - 122678785 GTACAGAGAACAAACACaaatgaaaacac-------------aggtctgctcaagagtgtgtacacacgagcccccagctgcgctgttcacggcagcc i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e macFas5.chr19 55833007 23308 + 59248254 M e rheMac3.chr19 60696463 3813 + 64156825 I a score=179698.000000 s hg38.chr19_GL949753v2_alt 769100 240 + 796479 aaaaggtagaaa-caaccaaatgcccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggccgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaattctatgtatatgatttcacacctatgaaacgccca s panTro4.chr19 59969719 240 + 63644993 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccatccatagagatggaatattagacggctgtgaaaaggagtgaagcactggctcatgctacagcaaggatgaccgtcagaaacactgtgctccgggaaagaaaccagacacgaaagaccacacagcgtagaatcccatttacatgaattctatgtatatgatttcacacctatgaaatgccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922041 240 + 60714840 aaaaggtagaaa-caaccaaatgtccatctgtggatgaagggacaacaa-aatgtggtccagccacagagatggaatattagacggccgtgaaaaggagtgaagcgctggctcacgctacagcaaggatgaccgtcagaaacactgtgctcggggaaagaaaccagacacgaaagaccacacagcgtacaatcccatttacatgaaTTCTATTTATATGATTTCACACCTATGAAATGCCCA i ponAbe2.chr19 C 0 I 393 s macFas5.chr19 55856896 234 + 59248254 aaaaaaaaaaaa-caaccaaatgtctatccgtgaatgaagggctaacaa-aatgtggtccatccatagagatggaatatta----gccatgaaaaggagtgaagcactggctcacgctacagcaagaatgaccctcagaaacactgtgctcagggaaagaaaccagacacgaaagac--cacagtgtccagtcccatttacatgaatgctatgtgtatgatttcacacctatgaaatgccca i macFas5.chr19 M 23308 C 0 s calJac3.chr22_GL285922_random 59269 228 + 138250 agaaggtagaaa-----ccaatgtccatccgtgggtaaagagataacaa-ca--tggtccct-cagaggggcagaatattacacagctgtgaaaaggagtggagcactgactcaggctacagcaaggaagacc-tcagaaactc--tgctcaggaagagaaagcagacac--aaggccacgtagtggacaatcccatttacaggaattctgttcacacgatttcacgcatatgaaatgccca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135277 208 - 122678785 gaaatatggaaaccacccctgtgtccatcagctgctgagcagaaatgaacaaggtgttacatccagagc-ctggaatgctactcggccacggaatagaacaaaacactgacacatggtataacataggtggacctcataaa---tgtgctca-taaaatgtgccagtcacaaaaagatatgtggtg-----------------------------caggatttcgtgtttatgaaatacctg i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=13443.000000 s hg38.chr19_GL949753v2_alt 769340 18 + 796479 gaataggcaaatccatag s panTro4.chr19 59969959 18 + 63644993 gaataggcaaatccatag i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857130 18 + 59248254 gaataggcaaatctatag i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 59497 18 + 138250 gaataagcaaatccacag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20135485 18 - 122678785 gaacaggccgatccacag i canFam3.chr1 C 0 I 1359 e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=155682.000000 s hg38.chr19_GL949753v2_alt 769358 399 + 796479 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-acagtgagc-aggtttctttctagggtaacag--atgttctaagattgattttaaagatggttgcat-------cattctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcactttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttt---agatggag--tctcactctgtcacccaggctggagtgcggtggcgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacct---accacaactagctaa s panTro4.chr19 59969977 405 + 63644993 agaaagaaaatagattcttggttttctagggcagggggtggggagagggaattacagcttgatagtt-aaagtgagc-aggtttctttctagggtaaccg--atgttctaagattgattttaaagatggttgcat-------cactctgtgactatactaaacatcactgaattggtcgggcacggtggctcacacctgtaattccagcaatttgggaggccaaggcaagaggatTCCCCATCCTCTCCtttttttttttttttttttagatggag--tctcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccacctcctgggttgaagcaattctcctgcctcaacctcccgagtagctgggattacaggcgcctgccaccacaactagctaa i panTro4.chr19 C 0 C 0 s macFas5.chr19 55857148 399 + 59248254 agaaagaaaatagattattggttttctagggc----tgcaggcagagggaattacagcttgatagttaaaagtgagcaaggtttctttctagggtaacagaaatgttctaagattgactttaaagatggttgcatcactctgcactctgtgactatactaaacaccatggaattCATcaggcacggtggctcacacctggaatcccagcacttggggag-----gGCATTAGGACt-----ttttttccttttttttttttttgt---agttggag--tctcactctgtcaccgaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcctgccaccacacctagctaa i macFas5.chr19 C 0 I 14 s calJac3.chr22_GL285922_random 59515 374 + 138250 agaaagaaaatagattattggtttcccagggc----tgtggggagaaggaattgcagcttggtagtt-aaa---agcaacgtt-----------taacaa--atgttctagggttgatttgaaagacggctgcat-------cgc----tgactacactaaacatcaccgaactggccggacacggtggctcacacctgtcatcccagcactttgggaggctgaggcaagaggatt-----gtttttccttttttttcttg-------agacggggtctctctctctgctgtccaggctggagtgcagtggtgcgatctcggctcactgcaacctccacctccagggttcaagtgattctcctgccttagcatcctaagtagctggggttacaggtgcccaccacctcacccagctaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60696463 3813 + 64156825 I a score=353034.000000 s hg38.chr19_GL949753v2_alt 769757 528 + 796479 ttttttatttttttattttt--------agtagagacagcggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccgcggcctcccaaagtactgggattacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaacccccttttctttttgtttattattattttt---ttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcacagctca-ttcagccttgaactcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctatggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagatgtgagccaccgagacccgccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat s panTro4.chr19 59970382 539 + 63644993 ttttttttttttttttttttttttttttagtagagacaggggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccaccccacggcctcccaaagtactggggttacaaataagccacaatgcccagccTCCAAtttttt-ttgttgtggtaaaatacaaatcacttaaaatttatcatcttaaccccctttTCTTTTTGTTTATTAttattattattttttttttgagtc--agtctcactctgctgccgcggctggagtgc--tggcgccatcatagctca-ttcagccttgaagtcctaggctcaagtgacctgggactataggtaccacctgtgccagcatgcctggctaactctgg-------------tagagatgggggtgttgctgtggtgtccaggctggtctggaacccctggcctcaagtgatcctcctgcctcagcctccaaaagtgctggaattatagacgtgagccaccgagaccagccctcttagccatttttaagtgtccagttcattggtattaaaaacatttat i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60700276 515 + 64156825 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttaaacttctgacctcaggtgatccactccgcagcttcccaaagtactgggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcatagctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i rheMac3.chr19 I 3813 C 0 s macFas5.chr19 55857561 515 + 59248254 tttttttttttttttttttt--------agtagagacaagggtttcaccatgttagccaagctagtcttgaacttctgacctcaggtgatccactccgcagcttcccaaagtactaggattacaaataagccacaatgcctggccTCCAA-ttttt-ttgttgtggtaaaatacaaatcacttaaaattaaccatcttaaccTCCCCCCCGCtttttt--------ttttt---ttttttttaagtcagagtctcattctgctgccctggctgg-gtgc--tggcaccatcattgctcacctcagccttgaagtcctgggctcaagtgacctgggactacaggcaccacctgtgccagcatgcctggctaattttgg-------------tagagatgtgggtcttgctacagtgtccaggctggtctggaaaccctggcctcaagtgatcctcctgccttagcctccaaaagtgctggaattatagatgtga---accaAGACCAGccctcttaaccatttttaagcgtccagttcattggtattaaaaacatt--- i macFas5.chr19 I 14 C 0 s calJac3.chr22_GL285922_random 59889 494 + 138250 ----ttttttttgcatttta--------agtagagacaggggtttcaccatgttagcccagctagtctcaaactcctgacctcaggtgatcggctcctcagcctcccaaaccgcttgggttacaAATACCCGACAGCACCTAGCCTCCATTtttttgttgttgttgtaaaattacaatcacttaaaatttactgtttcaacacccccc------------------ttttc---tttcttgggagtcaaagtcaca--ctgctgctcaggttggaatgcagtggtgccatcctagctca-ttcagccttgaagtcctgggctcaagtgacctgggactacaggcacca--------------tctggctaatttgggggtggggggcgcagagagatg-gggtcttcctatgttgtccaggctggtctggaactcctggcctaaagtgattctcctgcatcagcctccaaaagtgctggaattatagatgtga-------------gccaccttacccatttttatgtatccagttcattggtactgaaaacatgcat i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e ponAbe2.chr19 56922281 393 + 60714840 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=95601.000000 s hg38.chr19_GL949753v2_alt 770285 89 + 796479 ggctgggccgggcatggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga s panTro4.chr19 59970921 89 + 63644993 ggctgggccgggcacggtggctcacacctgtaatcccggcacttcgggagaccaaggcaggtggatcacctgaggtcaggagttcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922674 89 + 60714840 GGCTGggccgggcacggtggctcacacctgtaatcccagcactttgggagaccaaggcaggtggatcacctgaggtcaagagttcaaga i ponAbe2.chr19 I 393 C 0 s rheMac3.chr19 60700791 77 + 64156825 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i rheMac3.chr19 C 0 I 35 s macFas5.chr19 55858076 77 + 59248254 ------------catggtagctcacacctgtaatcccagcattttgggaggccgaggcgggtggatcacttgaggtcaggagttcaaga i macFas5.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 60383 83 + 138250 -----ggccgggcgtggtggctca-gcctgtcatcccagcactttcggaggccaaggcgggtggatcacctgaggtcgggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10431.000000 s hg38.chr19_GL949753v2_alt 770374 16 + 796479 ccagcctggccaacac s panTro4.chr19 59971010 16 + 63644993 ccagcctggccaacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922763 16 + 60714840 ccagcctggccaacac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55858153 12 + 59248254 ----cgaggccaacat i macFas5.chr19 C 0 I 23 s calJac3.chr22_GL285922_random 60466 16 + 138250 ccagcctgaccaacat i calJac3.chr22_GL285922_random C 0 I 23 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I e rheMac3.chr19 60700868 35 + 64156825 I a score=480604.000000 s hg38.chr19_GL949753v2_alt 770390 443 + 796479 attacaaacttagctgggtgtggtgttgcatgcctgtaatcccagctactcgggtggctgaggcaggagaattgcttgaacccgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaaacaataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttccgtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattccaact----tctctatgaatttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcgactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt s panTro4.chr19 59971026 441 + 63644993 attacaaacttagctgggtgtggtgttgcacgcctgtaatcccagctactcgggtggctgaggcaggagaatcgcttgaacctgggaggcgaaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaaaaaaaaa-caataataataattcctaatgttgtgcaaccattacaaccatccatctctcaaattgtttcatcttgccaaactaaacttc-gtttccattaaacag-taactccccattctcccctcccctcctgacccctggcaag-caccattcaaact----tctctatgaacttaactgtaggtagctcctgtaagtggaatcataccgtatttgctcttctgtcaactggcttatttcacttcatggaatgtcctcaaggttcatctgtttcaatgccctt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56922779 441 + 60714840 aatacaaacttagctgggtgtggtgctgcatgcctgtaatcccagctacttgggtggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacaagagcaaaactccatctcaaaaagaaaaa--CAGTAATAATAATTCCTAA---tgtgcaaccatgacaaccatccatctctcaaattgtttcatcttcccaaactaaacttctgtttccattaaacaa-taactcctcattct-ccctccactcccgacccctggcaag-caccattcaaacttctctctctatgaatttaactctaggtggctcctgtaagtggaatcatacagtatttgctcttctgtcgaccggcttatttcacttcgtggaatgtcctcaaggttcatctgtttcaatgccctt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60700903 440 + 64156825 aatacaaaattagctgtttgtgttgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcatcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i rheMac3.chr19 I 35 C 0 s macFas5.chr19 55858188 440 + 59248254 aatacaaaattagctggttgtggtgccacatgcctgtagtcccagccacttgggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgaggtcatgccactgcactccagcctgggcgacaagagcaaaactccctctcaaaaagaaa----cagtaataataatttctaatgttgtgcaaccatcacaaccacctgtttctcaaactgtttcgtcttcccaaactaaacttctgtgcccattaaataattaactccccattctctcctcccctcccaacccctggcaagccattattcaaact----tctctatgaatttaactctaggtagctcctataagtggaatcatacagtatttgctcttctgtcgactgactgatttcacttcatagaatgtcctcaaggttcatc-gtttcaatgacctt i macFas5.chr19 I 23 C 0 s calJac3.chr22_GL285922_random 60505 417 + 138250 aatacaaaattagctgggtgtggtggtgcatgcctgtaatcccagctacttgggaagctgaggcaggagaattgcttgaacctgagaggcagaggttgcagcaagctgagatggtgccactgtaccccagcctgggcaacaagagcaaaaatccatctcaaacaaaaa----aagtcataa-------------tgtacaaccaacacgactacccgtctctagaacgttttcatcttcccaaactaaaattctgtgtctattaaacaa-taactccccattctcccctcccc-----acccctggcaag-cac----caaact----cctctatgaatttaactctaggtagctcatataagtggaatcacacagtatttgttcttctgtggaatggcttatttcacttagtgtcatgtcctcaaggtccatccatTAGAATGCCCCT i calJac3.chr22_GL285922_random I 23 I 462 e canFam3.chr1 20135503 1359 - 122678785 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=10493.000000 s hg38.chr19_GL949753v2_alt 770833 13 + 796479 -ttttttgttttgc s panTro4.chr19 59971467 13 + 63644993 -ttttttgttttgc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923220 13 + 60714840 -ttttttgttttgc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701343 14 + 64156825 actttttgttttgt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858628 14 + 59248254 acTttttgttttgt i macFas5.chr19 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I e papAnu2.chr19 47946046 2465 + 51301725 I a score=13589.000000 s hg38.chr19_GL949753v2_alt 770846 19 + 796479 tttgttt-tgttttgttttT s panTro4.chr19 59971480 19 + 63644993 tttgttt-tgttttgttttT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923233 12 + 60714840 tttgttt--------ttttt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701357 19 + 64156825 tttgttt-tgctttgttttg i rheMac3.chr19 C 0 I 6 s macFas5.chr19 55858642 19 + 59248254 tttgttt-tgctttgttttg i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47948511 20 + 51301725 ttcgtttctttttttttttt i papAnu2.chr19 I 2465 I 6 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M e chlSab2.chr6 47645726 2646 + 50890351 I a score=306716.000000 s hg38.chr19_GL949753v2_alt 770865 200 + 796479 gagtctcactctgtcacccaggctggagtgccgtggcgccatctctgctcactgcaacccctgcctctcaggttcaagcgattctcctgcttc-agcctcccaagcagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtctcgaac s panTro4.chr19 59971499 200 + 63644993 gagtctcgctctgtaacccaggctggagtgcagtggcaccatctctgctcactgcaacccctacctctcaggttcaagcgattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccaccacaactcctggctaa-tttttgta-tttttagtagagagggggtttcaccatgttggttaggctggtcttgaac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923245 200 + 60714840 gagtctcgctctgtcacccaggctggagtgcagtggcgccatttctgctcactgcaacctctgcctctcaggttcaagcaattctcctgcttc-agcctcccaagtagc-tgggactacaggtgcccgccacaactcctggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggttaggctggtctcaaac i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60701382 201 + 64156825 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55858667 201 + 59248254 gagtcccgctctgttgcccaggctggagtgcagtggtgcgatctcggttcaccgcaacctctgcctcccgggttcaagcgattctcctgcctc-agtctctcgggtagcttgggattacaggcacccactacaatgcctggctaa-tttttgta-tttttagtagagatggggtttcaccacgttggttaggctggtctcgaac i macFas5.chr19 I 6 C 0 s papAnu2.chr19 47948537 202 + 51301725 gagtctcgctctgttgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcccgcctc-agcctcccgagtagc-tgggactgcaggcgcccgccaccgcgcccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47648372 203 + 50890351 gagtttcgctctgtcgcccaagctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcgagactcccgagtagc-tgggactacaggcgcccgccacctcgcccggctagatttttgtattttttagtagagacggggtttcaccgggttagccaggatggtcttgatc i chlSab2.chr6 I 2646 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I e nomLeu3.chr10 103390738 2381 - 106955855 M a score=154649.000000 s hg38.chr19_GL949753v2_alt 771065 72 + 796479 tcctgacctcgtgatccgccagctttggcctcccaaagtactga--ttacaggcgtgcaccaccgcgcccggcc s panTro4.chr19 59971699 74 + 63644993 tcctgacctcgtgatccgccagcttcggcctcccaaagtgctgagattacaggcgtgtgccaccgcacccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923445 74 + 60714840 tcctgacctcgtgatctgcccgcctcggcctcccaaagtgctgagattacaggtgtgcgccaccacgcccggcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393119 74 - 106955855 tcctgaccttgtgagccgccagcctcggcctcccaaagtgctgagattacaggcatgtgccaccgcgcccagcc i nomLeu3.chr10 M 2381 C 0 s rheMac3.chr19 60701583 74 + 64156825 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858868 74 + 59248254 tcctgacctggtgatccatccgccttagcctcccaaagtgctgggattacaggcttgagccactgcgcccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948739 74 + 51301725 tcctgacctcaggatctgcccgtctcggcctcccgaagtgctgggattacaggtgtgagccactgcgcctggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648575 74 + 50890351 tcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacagacttgagccaccgcgcccggcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20135503 1359 - 122678785 I e calJac3.chr22_GL285922_random 60922 462 + 138250 I a score=404154.000000 s hg38.chr19_GL949753v2_alt 771137 157 + 796479 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctccggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag s panTro4.chr19 59971773 155 + 63644993 agaatgcccttcctttttaaggctgaatcatatgccc--gtctatagaagccacattctgtttccctgttcatctgtggatgggtgcctgggttccttccacctctggactgtgaataatgctgcagtgagcatggatgtacagatatctctctgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923519 157 + 60714840 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgggtgcctgggctccttccacctctggactgtgaataatgctgtaatgagcatggatgtgcaggtatctctctgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393193 157 - 106955855 agaatgcccttcctttttaaggctgaatcatatgcccctgtctatagaggccacattctgtttccctgttcatctgtggatgagtgcctgggttccttccacttctggacagtgaataatgctgcaatgagcatggatgtgcagatatctctctgag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701657 155 + 64156825 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataacgctgcagtgagcatggatgtgcagatatctctctgag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55858942 155 + 59248254 --aatgcccttcgtttttaaggctgaatcatataccactgtctacagaggccacattctgtttctctgttcatctgtggatggatgcctggcttccttccacctttggactgtaaataacgctgcagtgagcatggatgtgcagatatctctctgag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47948813 138 + 51301725 --aatgcCCTTcgtttttaaggctgaatcatatACCACTGTCTACAGAGGCCACACTCTGTTTCTCTGTTCATCTGTGGATGGGTGCCTGGCT-----------------TGTGAATAACGCTGCAGTGAGCATGGATGTGCAAATCTCTCTCTGAG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648649 152 + 50890351 -----gcccttcgtttttaaggctgaatcgtataccactgtctacagaggccacgttctgtttctctgttcatctgtggatgggtgcctggcttccttccaccttcggactgtgaataatgctgcagtgagcgtggatgtgcagatctctctctgag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61384 139 + 138250 agaaTGCccttccttttgcaggctgaatcatgttccactgtctgcagactccacg-tgtgcttctctgttcatctgt-gatgggtgcctgggttgct---------ggaccgtgaatcatgct-------gcatgggtgtgcaaatatctctccgcg i calJac3.chr22_GL285922_random I 462 C 0 e canFam3.chr1 20135503 1359 - 122678785 I a score=1100946.000000 s hg38.chr19_GL949753v2_alt 771294 348 + 796479 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCACCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCTTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCAAGGGACCTC-TGTCATGTTCTCCAT--------------------------------AAGTGGCT------------CCACCCAGTGT----------CTGGCGTGTGGAACGCCTTCAGCAA s panTro4.chr19 59971928 348 + 63644993 AGCCAAAGCAGGGGAGATCTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTGGGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---CCCTGTCTAAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCCGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56923676 348 + 60714840 AGCCAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCCGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACATACCCCAACTGAAACAC--AGACATCATGACATCACACCACGGGATCTC-TGTCATGTTCTCCAT--------------------------------AAATGGCT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCAGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393350 345 - 106955855 agccAAAGCAGGGGAGATTTTACCTCTCCTGGCCAGTTCCAAGGCGGTCTGCTTCCCAATGCCTGTGTTGGCGCCCGTCACAATGACCGTCTTCCCAGAGATGGTGGCCTTGCTGGGGCAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCACGGTCAGTCCTGTCTGCCCA--CTCACTCCACGTGCCCCTGACTGAATGATCTCAGGCAA---ACCTGTCTGAGCTCACTCACGTACCCCAACTGAAACAC--AGACAACATCACATCACACCATGGGATCTC-TGTCACGTTCTCCAC--------------------------------AAATGGCT------------CCACCCA-TGT----------ATGGTGTGTGGAACGCCTTCAGCAA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60701812 348 + 64156825 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859097 348 + 59248254 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCGGTGACATAGTCCCTGAGGGTGAGCAGCAGCATGGTCAGTCCTATCTGCCAACTCTCACTCCACATGCCCCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAT--AGACGTCATCACATCACACCACGGGATCTC-CGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i macFas5.chr19 C 0 I 302 s papAnu2.chr19 47948951 347 + 51301725 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACAAGCCCCACCAGTGACATAGTCCCTGACGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCGCTGACTGAGTGATCTCAGGCAA---AGCCGTCTGAGCTCACTCACGTCCCCCAACTGAAACAC--GGACATCATCACATCACACCACAGGATCTC-CGCCCTGTTCTCCAT---------------------------------GATGACT------------CCACCCAGTGT----------CTGGTGTGTGGAACGCCTTCCGCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47648801 348 + 50890351 AGCCAAAGCAGGGGAGATTTTACCTCTCTTGGCCAATTCCAAGGCGGTCTGCTTCCCGATGCCTGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGACACGCCCCACCGGTGACATAGTCCCTGAGGGTGAGAAGCGGCATGGTCAGTCCTGTCTGCCAACTCTCACTCCACGTGCCCCTGACTGAGTGACCTCAGGCAA---ACCCGTCTGAGCTCACTCACATCCCCCAACTGAAACAC--AGACATCATCACATCACACCACGGGATCTC-TGTCCTGTTCTCCAT--------------------------------AAATGACT------------CCACCCAGTGT----------CTGGTGTGTGGACCGCCTTCAGCAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61523 399 + 138250 agccAAAGCAGGGGAGAGTTTACCTCTTTTCGCCAGTTCAAAGGCGGTCTGCTTCCCTATGCCCGTGTTGGCGCCCGTCACGATGACCGTCTTCCCAGGGATGGTGGCCTTGCTGGGGCAAACCCCACCGGCAACATTGTCCCTGAGCGCGGGAAGGGGCACAGTCAGTCCTGTCTGCCCACTCTCACCCCACGTGCCCCTGACTGAGTGATCTCTGACAA---ACCCGTATGAGCTCACTCCCGCCCCCCAACTGAAAAAC--AGATGTCATCACATCACACAGTGGGATCTC-TGTCCTGttctccacgttggtcaggctggtctcgaactcttgacctcaggtgatctgtccgccttggcctcccaaagtgctgggatcacaggtgtgagccactgcacccg--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20136862 338 - 122678785 AGCCTCAGCAGAAAAAG---CACCTCTTCTGGCCAGCTCCAAGGCCGTCTGCTTCCCAATGCCTGTATTGGCGCCAGTCACAATGACGGTCTTCCCAGGAATGGTGGCCTTGCTGGGACAGGCCCCGCCCGCAATGTAGTCTCTGAAGATAAGAAACA--ATCATCAGTTCTGTCTGC--ACCCCCACCACACATGCCCCTG--TTAAtgatcttgagcaaatgaccccactgagcttgtgt---tcccccaaaggacagatgagaaggacatctcataactccgtgggggccagtgtgatggtacaggc--------------------------------aaa-ggct------------cagcaca--gc----------cctgTGCGAGGAGGTGCCACAACA- i canFam3.chr1 I 1359 C 0 a score=27717.000000 s hg38.chr19_GL949753v2_alt 771642 9 + 796479 GTGACAGTC s panTro4.chr19 59972276 9 + 63644993 GTGACAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924024 9 + 60714840 GTGACAGTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393695 9 - 106955855 GTGACACTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702160 9 + 64156825 GTGACAGtc i rheMac3.chr19 C 0 I 304 s macFas5.chr19 55859747 9 + 59248254 gTGACAGTC i macFas5.chr19 I 302 I 1 s papAnu2.chr19 47949298 9 + 51301725 gtgacagcc i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47649149 9 + 50890351 GTCACAGtc i chlSab2.chr6 C 0 I 313 s calJac3.chr22_GL285922_random 61922 9 + 138250 gTGACCATC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137200 8 - 122678785 -TGACAATC i canFam3.chr1 C 0 C 0 a score=443.000000 s hg38.chr19_GL949753v2_alt 771651 1 + 796479 A s panTro4.chr19 59972285 1 + 63644993 G i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924033 1 + 60714840 G i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393704 1 - 106955855 G i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 61931 1 + 138250 G i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137208 1 - 122678785 A i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47649158 313 + 50890351 I e papAnu2.chr19 47949307 1 + 51301725 I e macFas5.chr19 55859756 1 + 59248254 I e rheMac3.chr19 60702169 304 + 64156825 I a score=25641.000000 s hg38.chr19_GL949753v2_alt 771652 7 + 796479 TTATTTT s panTro4.chr19 59972286 7 + 63644993 TTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924034 7 + 60714840 TTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393705 7 - 106955855 TTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702473 7 + 64156825 TTATTTT i rheMac3.chr19 I 304 C 0 s macFas5.chr19 55859757 7 + 59248254 TTATTTT i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47949308 7 + 51301725 ttttttt i papAnu2.chr19 I 1 I 2054 s chlSab2.chr6 47649471 7 + 50890351 TTATTTT i chlSab2.chr6 I 313 C 0 s calJac3.chr22_GL285922_random 61932 7 + 138250 TTATTTT i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137209 7 - 122678785 TTACTTT i canFam3.chr1 C 0 C 0 a score=65777.000000 s hg38.chr19_GL949753v2_alt 771659 25 + 796479 ATAAATGCTCACTGCATGAGATTCC s panTro4.chr19 59972293 25 + 63644993 ATAAATGCTCACTGCATGAGATTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924041 25 + 60714840 ATAAATGCTCCCTGCATGAGATTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393712 25 - 106955855 CTAAATGCTCACTGCATGAGATTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702480 25 + 64156825 ATAAATGCCCACTGCATGAGATTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55859764 25 + 59248254 ATAAATGCCCACTGCATGAGATTCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649478 25 + 50890351 ATAAATGCCCACTGCATGAGATTTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61939 25 + 138250 ATAAACACCTACTGCATGAGATTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20137216 25 - 122678785 GTAAAGACCCACtgtattggtctcc i canFam3.chr1 C 0 I 1695 e papAnu2.chr19 47949315 2054 + 51301725 I a score=102493.000000 s hg38.chr19_GL949753v2_alt 771684 52 + 796479 Cggccaggtgagggggcttgcacctgtaatcccagcactttgggaggccaaa s panTro4.chr19 59972318 52 + 63644993 Cggccaggtgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924066 52 + 60714840 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393737 52 - 106955855 Cggccaggcgaggtggctcgcgcctgtaatcccagcactttgggaggccgaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60702505 52 + 64156825 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaA i rheMac3.chr19 C 0 I 3619 s macFas5.chr19 55859789 52 + 59248254 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaaa i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47649503 52 + 50890351 CAgctgggcgaggtggctcgcacctgtaatcccagcactttgggaggccaac i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61964 32 + 138250 CAGCCCGGCAA--------------gtaatcccagcactttgggag------ i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I a score=135687.000000 s hg38.chr19_GL949753v2_alt 771736 105 + 796479 gttttgggggtgggggggggcgggggcggatcacttgaggtcaggagttcgagtccagcctggcaaacatggcgaga-ccccgtctctact-taaaatacaaaaaTT s panTro4.chr19 59972370 105 + 63644993 gtttggggggggggggggggcgggggtggatcacttgaggtgaggagttcgagtccagcctggcaaacatggtgaga-ccctgtctctact-aaaaatacaaaaaTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924118 96 + 60714840 gtat---------ggggtggtgggggcagatcacttgaggtcaggagttcgagtccagcctggcaaacatggcaaga-ccctgtctctact-aaaaatacaaaaatt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393789 97 - 106955855 gttt---------cagggggcgggggcagatcacttgaggtcaggagttcaagtccagcctggcaaacatggcgagacccccgtctctact-aaaaatacaaaaaTT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55859841 95 + 59248254 -----------gtcgggggtggggggcaggtcacttgaggtcaggagttcgagtccagcctggcaaacgtggggagacccctgtctctact-aaaaatacaaaaatt i macFas5.chr19 C 0 I 308 s chlSab2.chr6 47649555 96 + 50890351 -----------gtcgggggcggggggcaggtcacttgaggtcaggagttccagtccagcctggtaaacatggggagacccctgtctctactaaaaaatacaaaaatt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 61996 90 + 138250 ------------tcagaggc---aggcagatcacttgaggtcaggagttcaagaccagcctggcaaacatggtgaga-cgcagtctctact-aaaaatacaaaaatt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=8120.000000 s hg38.chr19_GL949753v2_alt 771841 6 + 796479 AGCCAG s panTro4.chr19 59972475 6 + 63644993 AGCCAG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924214 6 + 60714840 agccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393886 6 - 106955855 AGCCAG i nomLeu3.chr10 C 0 C 0 s chlSab2.chr6 47649651 6 + 50890351 agccag i chlSab2.chr6 C 0 I 1937 s calJac3.chr22_GL285922_random 62086 6 + 138250 ggccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=3338.000000 s hg38.chr19_GL949753v2_alt 771847 5 + 796479 ATGtg s panTro4.chr19 59972481 5 + 63644993 GCGtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924220 5 + 60714840 gcgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393892 5 - 106955855 GCGtg i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 62092 5 + 138250 gcatg i calJac3.chr22_GL285922_random C 0 I 385 e canFam3.chr1 20137241 1695 - 122678785 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=234121.000000 s hg38.chr19_GL949753v2_alt 771852 476 + 796479 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgtacttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggaagtgccttgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacgatgcactgcagaaagctgcagggacctctgcccttgaacacagagtattgtccaaggtttctccccgtgggatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccaacacccgtaaagggtctgtgctgaggtggattggtaaaagaggaaagcctcttg s panTro4.chr19 59972486 476 + 63644993 taggga----aaagagagattagactgttactgtgtctatatagaaaggaaagaca-taagagactccattttgaaaaagacctgttcttt--gaacaattgctttgctgagatgttgttaatttgtagctttgacccagccactttgacccaatctggagctcacaaaaacctgtgttgtatgaaatcaaggtttaagggatctagggctgtgcaggacgtgccctgttaac-acaatgtttccaagcagtatacttggt-aaaagtcatcgccagtctctagtctcaataaaccaggggcacaatgcactgcggaaagccgcagggacctctgccattgaacgcggggtattgtccaaggtttctccccatgggacagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcccgacacccataaagggtctgtgctgaggtggattagtcaaagaggaaagcctcttg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924225 483 + 60714840 tagggaaaagaaagagagattagactgttactgtgtctatatagaaaggaaagacattaagagactccattttgaaaaagacctgtactttgagaacaattgctttgctgagatgttgttaatttgtagctttgccccagccactttgacccaacctggagctcacaaaaacctgtgctgtatgaaatcaagttttaagggatctacggctgtgcaggacatgcctcgttaac-aaaatgtttacaagcagtatacgtggtaaaaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgcagaaagccgcagggacctctgcccttgaaagcggggtattgtccaaggtttctccccatgtgatagtctgaaatatcgcctcgtgggatgagaaagacctgaccgtcccccagccggacacccgtaaagggtctgtgctgaggtgga-tagtaaaagaggaaggcctctcg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103393897 477 - 106955855 taggga----aaagagagatcagactgttactgtgtctatacagaaaggaaagaca-taagagactccattttgaaaaagctctgtacttt--aaacaattgcttcactgagaggttgttcatttgtagcttcgccccagccgctttgacccaacctggagctcacaaaaacacgtgctgtatggaatcaaggttgaagggatccagggctgtgcaggacgtgccttgttaacaaaaatgtttacaggcagtgtacttggt-agaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgtggaaagccgcagggacctctgccctggaaagcggggtgttgtccaaggtttctccccatgagatagtctgaaatatggcctcgtgggatgagaaagacctgaccgacccccagcccaacacccgtaaagggtctgtgctgaggaggattagtaaaagaggaaagcctcttg i nomLeu3.chr10 C 0 M 1720 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=135864.000000 s hg38.chr19_GL949753v2_alt 772328 522 + 796479 cagttgagagagaggaaggccactgtctcctgcctgaccctgggaactgaatgtctcggtataaaacctgattgtacatttgttcaattctgagacaggagaaaagccgccctatggcgggaggcgagacatgtttacagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacatcaatctggcctacgtgcacgtccaggcatagtaccttcccttgaacttaattatgtcatagattcttttgctcacatggtttttgctgac-----ctcattatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcagtaaaaactgagggaactcagaggccggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactt------tgtgtcttatttcttttctcagtctctcgtcccacccaactagaaatacccacaggtgtggaggggcaggccaccccttca s panTro4.chr19 59972962 528 + 63644993 cagttgagatggaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgactgtacatttgttcaattctgagataggagaaaaaccgccctatggtgggaggcgagacatgttggcagcaatgctgccttgttattctttaccccgctgagatgtttgggtggagagaaacatcaatctggcttacgtgcacgtccaggcatagtaccttcccttgaacttaatgacatcatacattcttttgctcacatgttttttgctgac-----ctcactatcaccctgctctcctactacattcctttttgctgaaataatgaagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgactagaaatacccacaggtgtggaggggctggccaccccttca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56924708 531 + 60714840 cagtcgagatagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgattgtacatttgttcaattctgagatagaagaaaaaccgccctatggtgggaggcgggacatgtttgcagcaatgctgccttgttattctttactccgctgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggcatattaccttcccttgaacttaattatgacatagattcttttgctcac--gttttttgctgaccttctcttattatcaccctgctctcctactacattcctttttgctgaaataatgcagataataatcaataaaaactgagggaactcagaggccggtgccggtgcaggtccttggtgtgctgagtgccagtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacccgagtagaaatacccacaggtgtggaggggcaggccaccccttca i ponAbe2.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55859936 308 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=337190.000000 s hg38.chr19_GL949753v2_alt 772850 696 + 796479 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcacgagattcccaaggctgctgtacgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaacatgtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatcttcaacctgcatcctcactggaacctctccttta--------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggctcaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccacgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct s panTro4.chr19 59973490 691 + 63644993 caggcgtggtggtgcacacctgtaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggcggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtatgcattaccacagacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaataggtctcactggaataaatcaaggtattggtagagtcaggttccttctggaggctctagggaagaatccacttccagctcctacagaccgccacattcctccactcttggccccgcctccatc-tcaacctgcatcctcactggaacctctcc------------------------tttatttatttatttacttatttatttttgagacagagtctcgctctgtcgcccaggctggcgtgcagtggcacaatctca-gctcactgtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattacaggcacatgccaccacacctggctaatttcttttgtatttttagtagagacagagttttaccatgttggtcaggctggtctcgaactcctgaccttgtgatccgcctgccttggcct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56925239 692 + 60714840 caggcgtggtggcgcacacctgcaatctcagctactcagggggctgaggcacgagaattgcttgaacctggaaggtggaggttgcagtgagtcgaaatggtgccagcctgggcaacagagcgagactctgtctcaaaaaaaTTTAAATTTAAATTTAAAATGCCCGCtgcatgagattcccatggctgctgtacgcattgccacaaacttagtggcttaaaaccacataagtgcatcctcctccagttcggcaggtcaagagtccaaaatacgtctcactgggataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccacttccagatcctacagaccaccacattcctccactcttggccccgcctccatcttcaaactgcatcctcactggaaccgctcc------------------------ttTATTGATTGATTGAttt-tttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcacgatctcatgctcatggtaaccttcgcctcacaggttcaagcgattctcctgccttagcctcctgagtggctgggattactggcacatgccaccacacctggctaatttcttttgtatttttagtagagatggagttttaccacgttggtcaggctggtctctaacgcctgaccttgtaatctgcctgccttggcct i ponAbe2.chr19 C 0 I 373 s macFas5.chr19 55860244 711 + 59248254 caggcatggtggtgcacacctgtaatc-cagctactccagggactgaggcacgagaattgcttgaacccggaaggcgggggttgcagtgagtcaaaatggcgccagcctgggcaacagggtaagacgccgtctcaaaaaaaTTTTAATTTAAATTTAAAATGCCCACtgaatgagatttccgcggctgctgtacacattaccacaaacttagtggcttaaaaccacgtaagtgcatcctcctacagttctttaggtcaagagtccaaaatacgtctcactggaataaatcaaggtattggcagagtcaggttccttctggaggctctaggggagaatccatttccagctcctacaaatcgccacattcctccactcctggccccgcctccatcttcaaaccgcataatcactggaacctctcctttatttatttttatttttttatttttatttatttatttatttattta-ttttgagacggagtctcactctgtctcccaggctggagtgcagtggcccgatctcg-actcactacaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgtccaccaccacccccggctaat---ttttgtatttttagtagagacgggatttcaccatattggccaggctggtctcgaactcctgaccttgtgatccgcccgcctcagcct i macFas5.chr19 I 308 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=9813.000000 s hg38.chr19_GL949753v2_alt 773546 38 + 796479 cccaaagtgctgcgattacaggcgtgagccaccacacc s panTro4.chr19 59974181 38 + 63644993 cccaaagtgctgcgattacaggcgtgagccaccacacc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55860955 38 + 59248254 cccaaagtgctgggattacaggcgcgagccaccgcgcc i macFas5.chr19 C 0 I 711 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=382.000000 s hg38.chr19_GL949753v2_alt 773584 4 + 796479 caac s panTro4.chr19 59974219 4 + 63644993 caac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e calJac3.chr22_GL285922_random 62097 385 + 138250 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=20196.000000 s hg38.chr19_GL949753v2_alt 773588 88 + 796479 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaaggcaggaccgg s panTro4.chr19 59974223 88 + 63644993 aacctctccttctatcttccatctcccctctgactgagcctcctgctccctcttataaggaccctataagactacaAGGCTGGACTgg i panTro4.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62482 88 + 138250 aacctctccttctggcttcctcctgccctctgactgagcctcctgctccctcacataaggaccttataagactacaaagtaggccgtg i calJac3.chr22_GL285922_random I 385 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e papAnu2.chr19 47949315 2054 + 51301725 I e macFas5.chr19 55860993 711 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5151.000000 s hg38.chr19_GL949753v2_alt 773676 8 + 796479 cacagtgc s panTro4.chr19 59974311 8 + 63644993 cacagtgc i panTro4.chr19 C 0 C 0 s macFas5.chr19 55861704 8 + 59248254 catggtgg i macFas5.chr19 I 711 C 0 s papAnu2.chr19 47951369 8 + 51301725 cacggtgg i papAnu2.chr19 I 2054 C 0 s calJac3.chr22_GL285922_random 62570 8 + 138250 cacggtgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e ponAbe2.chr19 56925931 373 + 60714840 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=80183.000000 s hg38.chr19_GL949753v2_alt 773684 69 + 796479 ctcacacctgtaatcccagcactttgggaggccaagacaggaggatcacttgaggtcaggagttcgaga s panTro4.chr19 59974319 69 + 63644993 ttcacacctgtaatcccagcactttgggaggccaaggcgggaggatcacttgatgtgaggagttcgaga i panTro4.chr19 C 0 M 543 s ponAbe2.chr19 56926304 69 + 60714840 ctcacacctgtaatcccagcactttgggaggccaaggcggcaggatcacttgaggtcaggagttcgaga i ponAbe2.chr19 I 373 C 0 s macFas5.chr19 55861712 69 + 59248254 ctcatgcctgtaaccccagcactttgggaggccgaggtgggcagatcacctgtggtcaggagttcgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951377 69 + 51301725 ctcatgcctgtaaccccagcactttgggaggccgagatgggcagatcacctgtggtcaggagttcaaga i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 62578 69 + 138250 ctcacacctgtaatcccagcactttgggaggccgaggtgggaggatcgcttgaggtccggagtttgaga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19547.000000 s hg38.chr19_GL949753v2_alt 773753 57 + 796479 ccagc--catggccaacatgctgacaccccatctctactaaaaatacaaaaatt-agcag s ponAbe2.chr19 56926373 57 + 60714840 ccagc--catggccaacatgctgacaccccatctctactgaaaatacaaaaatt-agcag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861781 53 + 59248254 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i macFas5.chr19 C 0 I 6 s papAnu2.chr19 47951446 53 + 51301725 ccaacagcctgaccaacatggagaaatctcatgc------aaaatacaaaatta-gccag i papAnu2.chr19 C 0 I 6 s calJac3.chr22_GL285922_random 62647 48 + 138250 ------------ccaaaatgctgacagcccacttctcctaaaaatacaaaaattgggccg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I e panTro4.chr19 59974388 543 + 63644993 M a score=137688.000000 s hg38.chr19_GL949753v2_alt 773810 250 + 796479 ggcttggtggtgcacgcctgtagagtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaaaaagactacatgataatcataagatccttcacttggccgggcacggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tggccagatccc s panTro4.chr19 59974931 247 + 63644993 ggctcggtggtgcacgcctgtagcgtcagctactcgggaggctgaagtgggaggaccacctgagcccagggagggtgaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaaaa---gaCTACATGATAATCATAAGATCCTTCACTTggccgggcacagtggctcacgcctgcaaccccagcactttgggaggccaagg--------tggccagatccc i panTro4.chr19 M 543 C 0 s ponAbe2.chr19 56926430 245 + 60714840 ggcttggtggtgcacacctctagactcaactactcgggaggctgaggtgggaggaccacctgagccccgggaggttcaggctgcagtgagctgtgacagcatgactgcactccagcctgggtgaca--gagagaccctgtctccaaaaaaaa-----gaCTACATGATAATCATAAGATCCTTCACTTggccgggcatggtggctcacgcctgtaaccccagcactttgggaggccaagg--------tgggcagatcac i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55861840 201 + 59248254 ggcacggtggctcatgcctgtagtcccagcactttgggaggccaaggagggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacggtgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcaggaaccc i macFas5.chr19 I 6 I 43 s papAnu2.chr19 47951505 201 + 51301725 ggcacggtggctcatacctgtagtcccagcactttgggaggccaaggcgggctgatcac--gaggtcaggaga--------------------------------tccagaccatcctggctaacacgatgaaaccctgtctctactaaaaa--------tacaaaa-----------------aattagctgggcgtagtggcgggcgcctgtagtcccagccactcaggaggctgaggcagaagaatggcatgaaccc i papAnu2.chr19 I 6 I 11 s calJac3.chr22_GL285922_random 62695 194 + 138250 ggctcagtggctcacgcctgtaatcccagcactttgggaggttgaggccagtggatcacctgaggtcaggagt--------------------------------tcaggaccagcctgtccaacatggtaaggccccgtctctagtaaata--------tacaaa------------------aattagctgggcgtggtggtgggcgcctgtaatctcagttactcaagaggctgaggcaggagaattgc-------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=5297.000000 s hg38.chr19_GL949753v2_alt 774060 20 + 796479 ctttggtcgggagctcaaga s panTro4.chr19 59975178 20 + 63644993 ctttggtcgggagctcaaga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926675 20 + 60714840 ctttggtcgggagctcaaga i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47951717 17 + 51301725 ctt--gcagtgagc-cgaga i papAnu2.chr19 I 11 I 16 s calJac3.chr22_GL285922_random 62889 20 + 138250 ttgaacccaggaggtagagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e macFas5.chr19 55862041 43 + 59248254 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=19996.000000 s hg38.chr19_GL949753v2_alt 774080 45 + 796479 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca s panTro4.chr19 59975198 45 + 63644993 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926695 45 + 60714840 -------------------------------ccagcctgaccaac-atggagaaacctcgtctc---tactaaaaataca i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862084 41 + 59248254 -------------------------------ccagcctgggggat-acagccagactccatctc-------aaaaaaaaa i macFas5.chr19 I 43 I 2 s papAnu2.chr19 47951750 48 + 51301725 -------------------------------ccagcctgggggac-agagcgagactccatctcaaaaaaaaaaaaaaaa i papAnu2.chr19 I 16 I 2 s calJac3.chr22_GL285922_random 62909 69 + 138250 ctgcagtgagctgagatcgcgccactgcactccagcctgggcaacaacagcaaaacttcatcta---------aaata-- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e chlSab2.chr6 47649657 1937 + 50890351 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=138151.000000 s hg38.chr19_GL949753v2_alt 774125 88 + 796479 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag s panTro4.chr19 59975243 88 + 63644993 aaattagacaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggccggacaatcgcttgaaccc-gggaggtggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926740 88 + 60714840 aaattagacaggcgtggtggcacgtgcctgtaatcccagctactcaggaggctgaggccggacagtcgcttgaaccc-gggaggtggag i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55862127 88 + 59248254 aaattagccaggcgtggtggcacatgactgtaatcccagctactcgggaggttgaggccggagaattgcttgaaccc-gggaggcggag i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47951800 88 + 51301725 aaattagccaggcgtggtggcatatgcctgtaatcccagctacttgggaagttgagggcggagaattgcttgaaccc-gggaggcggag i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47651594 88 + 50890351 aaattagccaggcatggtggcacatgcctgtaatcccagctactcgggaggttgaggctggagaattgcttgaaccc-gggaggcggag i chlSab2.chr6 I 1937 C 0 s calJac3.chr22_GL285922_random 62978 87 + 138250 --attagcagggcatagtgatacacacctgtagactcagctattcgggaggctgaggtaggaagatcacctgagcccagggaggttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e nomLeu3.chr10 103394374 1720 - 106955855 M e rheMac3.chr19 60702557 3619 + 64156825 I a score=340447.000000 s hg38.chr19_GL949753v2_alt 774213 175 + 796479 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa----------------------gatgcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtcgtcacaccttccgaggattaggacgtggacccctctacggagtcacg s panTro4.chr19 59975331 177 + 63644993 gttgtggtgagccgaggtcgtgccattgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaa--------------------aagaTGcttcacttaacacatcagcgagaacctctgacacgtgaggtaatgtagtcacaccttccgaggattaggacgtggacccctctacggagtcacg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56926828 176 + 60714840 gttgcggtgagccaaggttgtgccattgcactccagcctgggcaacaacagtgaaactttgtctcaaaaaaaaaaaa---------------------agatccttcacttaacacatcagcaagaacctctgacacgtgaggtaatgtagtcacacgttccgaggattaggacgtggacccctctacggagtcacg i ponAbe2.chr19 C 0 I 874 s nomLeu3.chr10 103396094 180 - 106955855 gttgcggtgagccaaggtcgtgccatcgcactccagcctgggcaacaacagcgaaactctgtctcaaaaaaaaaaaaaaa-----------------aagatccttcacttaacacatcagcaagaacctctcacacgtgaggtaatgtagtcacacgttctgaggattaggacgtggacccctctgcggagccagg i nomLeu3.chr10 M 1720 C 0 s macFas5.chr19 55862215 174 + 59248254 tctgtggtgagccaaggtagcgccattgcgctccagcctgggcaacaagagcaaaattccgtctc-aaaaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47951888 173 + 51301725 tctgtggtgagccaaggtcgGGCtaccgcgctccagcctgggcaacaagagcaaaactccgtctc--aaaaaaaaaa----------------------gatccttcaCTTAACACATCAGCAAGAACCTCTGACACCTGAGGTAATGTAGTCACAGGTTCCGAGGATTAGGACGTGGACCCCTCAGTGGAGCCATG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651682 172 + 50890351 tctgtggtgagccaaggtcgggctactgtgctccagcctgggcaacaagagcaaaactccttctc---aaaaaaaaa----------------------gatccttcacttaacacatcagcaagaacctctgacacctgaggtaatgtagtcacaggttccgaggattaggacgtggacccctctgtggagccatg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63065 193 + 138250 actgcagtgagctgtgacagcgtgactgcattccagcctgagcgac---agagagaccctgtctcaaaaggaaaaaaaaagcctacatgataatcataaggtccttcacttaacacatcagcaagaccctctgatgctcgaggtaatgtagtcacgagtacc-aggactgggacgtggacacctctccagagccgtg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=318298.000000 s hg38.chr19_GL949753v2_alt 774388 161 + 796479 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGCAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACAGA-----------------------------------GGCTAATTTTTAAGAAAGT s panTro4.chr19 59975508 161 + 63644993 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGATAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACCGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGCCACCAGCCACTGA-----------------------------------GGCTACTTTTTAAGAAAGT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56927878 161 + 60714840 actctgcccaccacaCCCATGTCCCACAGAGGCTAACACTGGAAACAAGGCAGTGTCCAGCAACAGGAGGCTGAGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGCGGCCACCAGCCACTGA-----------------------------------GGCTAATTTTTAATAAAGT i ponAbe2.chr19 I 874 C 0 s nomLeu3.chr10 103396274 160 - 106955855 actctgcccaccacaCCCATGTCCCACAGAGGCTAACGCTGGAAACAAGACAGTGTCCAGCAACAGGAGACTGGGCAGGTAA-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGGTCACCAGCCACTGA-----------------------------------GGCTAATTTTTAAGAAAG- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862389 169 + 59248254 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTCTCCAGCAACAGGAGGCTGAGCAGGTTA-ACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAA---------------------------TTTAAGTAAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952061 178 + 51301725 ACTCTGCCCACCACACCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCA---TCCAGCaacaggaggctgagcaggtaACACAGCACTGCACCCACAGGACAGAAGGGCACCATGCAATACAGTGTCCACCAGCCactaattttttaagtaaaaaaaattagttt----------------tttttaagtaagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47651854 196 + 50890351 actctgcccaccacaCCCATGTCCCACAGAGGCTAATGCTGGAAACAAGCCAGTTTCCAGCAACAGGAGGCTGAGCAGGTAC-ACAGCACTGCACCCACAGGAGAGAAGGGCACCATGCAATACAGTGTCCACCAGCCACTAATTTTTTAAGTAAAAAAAATTAGTTTTACTTAAAAAAACTAATTTTTAAGTAAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63258 158 + 138250 actctgcccaccacaCCCATGTCCCACGGAGGCTAATGCTGGAAATAC-ACAATATCCAGCAACAGGGGGCTGAGCAGATCA-GCAGCACAG--CCCACAGGAGACACAAACTGCAGGACACACAGTGGCCACCCGCCACTGA-----------------------------------GGCTTATTTTTAAATAAGT i calJac3.chr22_GL285922_random C 0 I 134 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=11919.000000 s hg38.chr19_GL949753v2_alt 774549 7 + 796479 TTAAATT s panTro4.chr19 59975669 7 + 63644993 TTAAATT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928039 7 + 60714840 TTAAATT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396434 6 - 106955855 -TAAACT i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862558 7 + 59248254 TTAAATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952239 7 + 51301725 ttaAATT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652050 7 + 50890351 TTAAATT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e calJac3.chr22_GL285922_random 63416 134 + 138250 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=653960.000000 s hg38.chr19_GL949753v2_alt 774556 319 + 796479 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----gcgaaaaatacaaaaattagccgggcgtggtggcgcacgtgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA s panTro4.chr19 59975676 319 + 63644993 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcacttt-ggaggccgaggcaggcggatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----acgaaaaatacagaaattagccgggcgtggtggcgcacctgtgatctcagctcctggggacgccaaggtgggaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccactgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928046 320 + 60714840 AAGTAggctgggcgaggtggctcacgtctgtaatcccagcactctgggaggccgaggcgggcgaatc------acctgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgagcccaggaggtcaaggctacagtgagccaagatcgcgccaccgcactccagcctgggcgacagagccagattctgccttt-aaaaataaacgaacaaataaataaTACAAAACAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103396440 319 - 106955855 AAGTAggctgggcgaagtggctcacacctgtaatcccagcactctgggaggccgaggcgggcggatc------acccgagg-----gcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaatacaaaaattagccgggcgtagtggcgcgcctgtggtctcagctcctggggacgctaaggtgagaggatcacctgagcccaggaggtcaaggctgcagtgagccaagatcgcgccaccgcactccagcctgggtgacagggccagattctgccttt-aaaaat-aacgaacaaataaataatacaaaACAA i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55862565 317 + 59248254 AAGAAggccgggcgaggtggctcacgtctgtaatccctgcactttgcgaggccaaggcgtgcggatc------acctgagg----cgcaggtgtttgagaccag---------------------cctggccaacatggcaaaaaccctgtctct-----cctaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtaggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagatgctgccttt-aaaaataaacgaacaaataaataaT-----ACAA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47952246 319 + 51301725 AAgaaggccgggcgaggtggctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----cgcaggtgtttgagacaag---------------------cctggcaaacatggc-aaaaccccgtctct--aaaaaaaaaaaaacaaaaattagccgggcgtggtggcgcacctgtagtctcagctcctggGGActctcaggtgggaggatcacctgagcccaggaggttaaggctgcagtgagccacgagcgcgccactgcactccaggctgggcaacagagccagattctgccttt-aaaaataaacgaacaaataaataat-----acaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47652057 317 + 50890351 AAGAAggccgggcgaggtagctcacgtctgtaatccctgcactttgggaggccgaggcgggcggatc------acctgagg----ggcaggtgtttgagaccag---------------------cctggccaacatggc-aaaaccccgtctct-----actaaaaaaacaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctcaggtgggaggatcacctgagcccaggaggacaaggctgcagtgagccaagagcgcgccactgcactccaggctgggcgccagagccagattctgcctttaaaaaataaacgaacaaataaataaT-----ACAA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 63550 341 + 138250 aaattagccaggcgtcgtggcagaggcctgtagtcccagctattcaggagaatgaggcagaaaaaccgatttaacctgggagggtcggaggttgcagtgaccggagatcgtgccactgcactccacctgggtgacagaac-aagactccgtctcaaaaaaaaaaaaaaaaaaaaaattagccgggcgtggtggcgcacctgtggtctcagctcctggggacgctaaggtgggaggatcacctgaatccaggtgggcaaagct-------gccgagaccgcgccactgcactccagcctgggtgacagagccagattctgcctct-aaaactaaatgaacaaataaataat--------- i calJac3.chr22_GL285922_random I 134 C 0 e canFam3.chr1 20137241 1695 - 122678785 I e rheMac3.chr19 60702557 3619 + 64156825 I a score=1074976.000000 s hg38.chr19_GL949753v2_alt 774875 453 + 796479 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGGCGTCAGGGGTCGGCGCGGAGCTTGCTGCACACCAGCCGCCTGGGTAGCTCCGAGGAAGAGCGCGCGACGCAGCCACAGGCGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG s panTro4.chr19 59975995 446 + 63644993 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCACTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCTGGGGGCCCGCCTTGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGGACAGGCGTCAGG-------GGTCGGCACGGACCTTGCTGCACACCAGCCGCCTGGGTACCTCGGAGGAAGAGCGCGCGACGCAGCCACACACGAGCGGAGGCGCAGGCGCGGCTGGGCCCGCG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928366 446 + 60714840 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCTGGCCAGA---GCGCAGGTTTGCCCCACTCCGGGTAGGCACTGCGGGTCGGGAGCTACGAGGCCTCGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCTCCTGCTCTGGGGGCCCGCCAGGACGACGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCCAGCGCCGACAGCGGCAGCAGGTACCGGCTCATGCCGGGACGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCTGCACACCAGCCACCTGGGCAGCTCGGAGGAAGAGCGCGCGACGCAAACACACACGAGCCGAGGCGCAGGCGCCGCTGGGACCGCG i ponAbe2.chr19 C 0 I 3 s nomLeu3.chr10 103396759 446 - 106955855 CAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACGTTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGTCAGA---GCGCAGGTTTGCCCCACTCCGGGCGGGCCCTGCGGGTCGGGAGCTACGGGGCCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCGGCCCCTGCGCGGGGGGCCCGCCTTGACCGCACACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGGCGCCTGCTACCGTGCCGAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCCGGCCGGGGACAGGGGTCAGG-------GGTCGGCGCGGAGCTTGCGGCACACCAGCCGCCTCTGCAGCTCCGAGTAAGAGCGCGCGGCGCAGCCACGCACGAgcggaggcgcaggcgcggctgggcccgcg i nomLeu3.chr10 C 0 I 3 s macFas5.chr19 55862882 446 + 59248254 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCTGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTAGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGTTGCACACCAGCCGCCCCGACCCCTCGGAGGAAGAGCGCGCGGCGCAGCTATCCAcgtgcggaggcgcaggcgcggcggggcccgcg i macFas5.chr19 C 0 I 3 s papAnu2.chr19 47952565 446 + 51301725 taaaataaagagttt-aaaaGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTTGGGGCGGACACTGCCGGTCGGGAGCTGCGGGGGCCGGACCCGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGCTCATGCCGGGCCGGGCACACGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCGGAGGAAGAGCGCGCGGCGCAGCCACCCACGTGCGGAggcgcaggcgcggcggggcccgcg i papAnu2.chr19 C 0 I 3 s chlSab2.chr6 47652374 446 + 50890351 TAAAATAAAGAGTTT-AAAAGTCTGGAAGGAAAGCAACATTTACAAGGGCCCAGGTTCGCCCTT-CCCTCCGAGTGACCTTGGGCCGGTGACCTGGCCGGCCAGA---GCGCAGGTTTGCCCCACTCGGGGCTGACACTGCCGGTCGGGAGCTGCGGGGGCTGGACCCGGGA--GCGA-----GGGGCGGGGGTCTCCGCCGTCTTCCCTGCCCCTGCGCGGGAGGCCTGCCTTGACCGTGCACGCGGGGCTAGAAGGTACTCACCTGAGCAGCACGGCGGCGCCTGCTAGTGTGCCCAGCGCCGACAGCGGCACCAGGTAGCGGTTCATGCCGGGCCGGGGACAGGGGTCGGG-------GGTCGAAGCGGAGCTGGCTGCACACCAGCCGCCCCGGCCCCTCAGAGGAAGAGCTCGCGGCGCAGCCACCCACGTGCGGAGGCGCAGGCGCGGCGGGGCCCCCG i chlSab2.chr6 C 0 I 3 s calJac3.chr22_GL285922_random 63891 438 + 138250 ------aaaGAGTTTAAAAAGTCTGAAAGGAAAGCAACATTTACAAGGGCCCAGGCTCGCCCTT-CCCTCCGAGTGACCTTGCGCC-GTGACCCGGCCGGCCCGA---GCGCAGGTTTGTCCCATTCC-CGCAGGCAGCGCGGGTCGGGAGCTGCAGAAGCTGCACCTGGGT--GCGA-----GGGGCGGGGGTCTCCGCCGCCTTCCCTGCCCCTGCGCTGGGGGCCCGCCGCGACCGCGCACGCGGGGCTAGAATGTACTCACTTGAGCAGCACGGCGCCGCCTACGACGGTGCCCAGCGCCGACAGCGGCAGCAGGTAGCGGTTCATGCCGGGCCCGGGACGGGGGTCAGT-------GGTCAGCGCGGAGCCGACTTCAGACCCGCCGCCCGGGCAGCTCCG-GGAAGAACGCGAGACGCAGCCAAGCACAAGGGGAAGCGCAGGCGCAGTGGGGCCCACG i calJac3.chr22_GL285922_random C 0 I 3 s canFam3.chr1 20138936 394 - 122678785 CACACTGACAAGCGC-GGAAGTCTGGACCAGCAG----ACTTGCAAGGGCCCGGGCCCGCCCCTGCCCTCGGGGTGACCTTGGGCC-GTGACCTGCCCTCTCGGCCCTTCCTAGGTGTGCCCCCCAC-----------------------GCTGCCTGGACCAGCCCTAGGCTGGCGACCACCGGGGC-GGCCTCTCTCCCGCCCTCC--GCCCACCTgccgggggccagcc-cgcccgccggcgcg---------cgcACTCACCGGAGCAGCACGGCGCCACCCACCGCCGTGCCGAGCACAGACAGCGGTAGGAGGTAGCGGTTCATGCCGGG-------CAGGAGCGGGG-------GTCCGACGCCGAGCCCACCGGAGACCTGCCGCCT-GGTCGCTCCGAG---GAGCTCACGGC-CGGCTTCCCACGTGGGGAAGGACCAGCTCTGC---------- i canFam3.chr1 I 1695 C 0 e rheMac3.chr19 60702557 3619 + 64156825 I a score=1487818.000000 s hg38.chr19_GL949753v2_alt 775328 477 + 796479 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGATTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTA-GT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCAGCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggagataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt s panTro4.chr19 59976441 475 + 63644993 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCTAGGGACGGGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCTACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctgtgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctg--- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56928815 478 + 60714840 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCGAGACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGAGT-CCGGGGGCGGA-----------GCCTATGGCTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAGTT----CTGGGGT-GAAAtaggttcgaatcccat--cactgtcaattccagactgagaccctctgtgtgtctttcaactatatcagcctattccctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGtgggtacccaagctcctagggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctgggggcctggactcctgggt i ponAbe2.chr19 I 3 C 0 s nomLeu3.chr10 103397208 475 - 106955855 tccggaactgggct---gcgaggggcggggcgcgggccg-agggggcggggatcccgggggcgggACCTATGAGCATCGGTCCTGAGCGCTGTCACAGCTGGGAGTGGTGGTTTCAGGAGCCTGTGGGCGTGGCTGCGT-CCGGGGGCGGG-----------GCCTATGGTTTGTTCGAATGACGTCACACTTGCCGCACCGTATAAGGCGCGACGCAgtt----ctggagt-gaaataggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaactatatcagcctattctctcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaATTTCCATGCCCAGAAACAAGGATTTAGTAGTCTGtgggtacctaagctcctggggtcctgcaggagaaggcggctgggggcctggactcctgggtctgag------------------------------------ggaggaggggccgggagtatggacttctg--- i nomLeu3.chr10 I 3 C 0 s rheMac3.chr19 60706176 513 + 64156825 TCCGGAACTGGGCT---GCGAggggcggggcgcgggcgg-agggggcggggATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCctgcgggtacccaagctcctggggtcctgcgggagaaggcagccaggggcctggactcctgggtccgagggaggaggggccgggggcatggactcctgggtccaaggaggaggggctaggggcctggactcctgggt i rheMac3.chr19 I 3619 C 0 s macFas5.chr19 55863331 477 + 59248254 tccggaactgggct---gcgaggggcggggcgcgggcgg-agggggcgggGATCCCAGGGGCCGGACCTATGAGCA-CGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGTAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTCTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGTCACAgct----ctggcgt-gaaacaggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttttggggataatttgagaatttccatgcacagAAACAAGGATCTAGTAGCCTGTGGGGACCCAAGCTcctggggtcctgcaggagaaggcagctgggggcctggactcctgggtccgag------------------------------------ggaggaggggctaggggcctggactcctgggt i macFas5.chr19 I 3 C 0 s papAnu2.chr19 47953014 477 + 51301725 tccggaactgggct---gcgaggggcgggccgcgggcgg-agggggcggggatcccaggggcgggACCTATGAGCA-TGGTCCTGAGCGCTGTCACAGCTGGGAGAAGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTTTGTTGGGATGACGTCATACTTGCCGCGCCATGTAAGGCGCGACACAGCT----CTGGCGT-GAAACAGGTTCGAATCCCAC--CACTGTCAATTCCAGACTGTGACCCTCTGTGTGTCTTTCAAATATATCAGCCTATTCCTTCATCTGGAAATGTGTGTT---------TACCTTCTTCATAGGCTTTTGGGGATAATTTGAGAATTTCCATGCACAGAAACAAGGATCTAGTAGCCTGCGGGTACCCAAGCTCCTGGGGTCCTGCGGGAGAAGGcagctgggggcctggactcctgggtctgag------------------------------------ggaggaggggctcggggcctggactcctgggt i papAnu2.chr19 I 3 C 0 s chlSab2.chr6 47652823 445 + 50890351 TCCGGAACTGGGCT---GCGAGGGGCGGGGCGCGGGCGG-AGGGGGCGGGGATCCCAGGGGCGGGACCTATGAGCA-CAGTCCTGAGCTCTGTCACAGCTGGGAGAGGTGGTTTCAGGAGCCTATGGGCGTGGCTACGT-CAGGGGGCGGG-----------GCCTATGGTGTGTTCGAATGACGTCATACTTGCCGCGCCATGTAAGGCGCGAcacagct----ctggcgt-gaaacgggttcgaatcccac--cactgtcaattccagactgtgaccctctgtgtgtctttcaaatatatcagcctattccttcatctggaaatgtgtgtt---------taccttcttcatagacttctggggataatatgagaATTTCCACGCACAGAAACAAGGATCTAGTAGCCTGTGGGTACCCAAGCTcctggggtcctgcgggagaaggcagctgggggcctggactcctgggtccaaa-------------------------------------------------------------------- i chlSab2.chr6 I 3 C 0 s calJac3.chr22_GL285922_random 64332 462 + 138250 TCCGGAAGTGGGCT---GCGAGGGGCGTGGCAAGGGCAG-AGTGGGCGGGGATCCCAAGGGCGAGACCTATGAGCATCGGCCCTGAGCGCAGTCACAGCTGGGAGTGGCGGTTTCAGGAGCATGTGGGCGTGGCCGTGT-CCGAGGGCGGG-----------GCCTACGGTTCGCTCGAACGGCGTCACATTTGCCGCACCGTTTAAGGCGCTCCGCAgct----ctgtagt-gacagaggttcgaatcccac--cactgttaattccagactgcgaccctctgtgtgtctttcaaatatgtcagcctatttcttcatctggaaatgtgtgct---------taccttcttcatagacttttggggataattTGGGAATCTCCATGCTCAGAAACAAGGATCTGGTAGCCTGTGGGTACCCAAGCTTCTgg---------------ggcagctcggatcctggactcct-tgtctgag------------------------------------ggagttgaggactggggcctggactcctgagt i calJac3.chr22_GL285922_random I 3 C 0 s canFam3.chr1 20139330 480 - 122678785 TCCGGGCGGAGGCTTCCGAGAGGGGCGGGGCGTGGACTGCCGGGAGCGGG--------------GGCCCACGAggg-cgggcctcggcgccgcggcggccgggccTGG-GATTTCCGTGGCC-GTGGGCGGGGCCGCGCGCTGGAGGCGGGGCAGGGGCCGAGCCTGCGCACTGTTCCAATGACGTCACGTT---CACGCCGCTCCCGGCGTTCGGCAGGTGCGCCTGGGTTAGAGACCTGCTCCGCCGCCACCGCGCTGCGGCTGGCAGGCTGCGCTCCTCTGCGCG--TTTCAGATTTATCAGCCTGTTCCCACCT---GACGTGCGTGCTCGCCAGTAGTACCTTCCTCGTGGACTACAGGAG--AACTTGAGAATTTCGACACTCGGAAGCCAGGACCTAGTGGCCTCGGGATTCCCAAACTCCTGGGGGCCTGAAGGA---GGAAATCAGGGCGTTAGACTCCTGGGTCTGAG------------------------------------GGAGGAGGGCCTGGGGGCCTGGACTCCtggat i canFam3.chr1 C 0 I 2211 a score=419472.000000 s hg38.chr19_GL949753v2_alt 775805 187 + 796479 ccaagggaggaggggctgggagcatggacttctgggtccgagggaggag-ggccgggtgcctggactgctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGCCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT s panTro4.chr19 59976916 117 + 63644993 -----------------------------------------------------------------------agtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTGCACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929293 187 + 60714840 ccaagggaggaggggccaggagcatggacttctgggtccgagggaggag-gggcgggtgcctggactcctgagtctgagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTCTGGGCCTTTACAGAGATATCTTCCCTGAACTCTGCCTGAACTACCTTTCTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397683 153 - 106955855 ----------------------------------ggtccgacagatgag-gggtgggtgcctggactcctgagtcttagggaggaggggctgggggcctgATTCATTCCCAAATTATCAGAATCTCATCCCCATGTATGGGCCTGCACACAGATATCTTCTGTGAACTCTGCCTGAACTACCTTTCTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706689 186 + 64156825 ccaagggaggaggggccgggggcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863808 186 + 59248254 ccaagggaggaggggccgggagcatggacttctaggtcccagggaggag-ggacaagtgcctggactcctgactcagagggaggaggggctggtggcct-ATTCATTTCCAAATTCTCAGAATCTCATCCCCATGTCTGGCTCTGCACAGAGATCTCTCCCCTGAACTCTGCCGGAACTACCTTTCTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953491 187 + 51301725 ccaAGGGAGGAGGGGCCGGGGACATGGACTTCTAGGTCCCAGGGAGGAG-GGACAGGGGCCTGGACTCCtaggtctgagggaggaggggctggtggCCTGATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATGCCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653268 182 + 50890351 -----ggaggaggggccgggggcatggacttctaggtcccagggagaag-ggacaggggcctggactcctgggtctgagggaggaggggctggtggcctgATTGATTTCCAAATTCTCAGAATCTCATCCCTATGTCTGGCTCTGCACAGAGATATCTTCCCTGAACTCTGCCGGAACTACCTTTCTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 64794 187 + 138250 ctgaaggaagaggagctgaggtcctggacttctgggtccaagggaggagaggccaggtgtcaggactcctgggcctgagggaggagaggctgagggcccgATTCATTCCCACATTCTCAGAATCTCATCCCAATGTCTGAGCCTGTACAGAGACGTCTTCC-TGAACTCTGCCTAAACtttttttttt i calJac3.chr22_GL285922_random C 0 I 306 e canFam3.chr1 20139810 2211 - 122678785 I a score=10444.000000 s hg38.chr19_GL949753v2_alt 775992 4 + 796479 AGAT s panTro4.chr19 59977033 4 + 63644993 AGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929480 4 + 60714840 AGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397836 4 - 106955855 AGAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706875 4 + 64156825 AGAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863994 4 + 59248254 AGAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953678 4 + 51301725 AGAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47653450 4 + 50890351 AGAT i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 64981 306 + 138250 I a score=826360.000000 s hg38.chr19_GL949753v2_alt 775996 290 + 796479 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGTGTATCTGATCACCACCTCCTACCCCTGACTGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCTCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGGAAGAGCTATTTT s panTro4.chr19 59977037 290 + 63644993 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGTGAGCGTATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACCCAA-----TCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTATACAGGCAGAAGCAGCTATTTT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929484 295 + 60714840 TGAGTATTGCACACACTCCTGCACTTACCTGTCCATGTTAGTCA---CCCCCACCAAACCGAGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCCAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GTTGGAAACAGGGAAGAATTCAACCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGCAGATTACACAGGCAGGAAGAGCTATTTT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103397840 281 - 106955855 TGAGTATTGCACACACTCCTGCACTCACCTGTCCATGTTTGTCA---CCCCCACCAAACCGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCACAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGGTGCCAGGAGCAGACACC-GCTGGAAACAGGGAAGAATTCAACTTAG--------------GAGTAAGTTTTCTTCCCCATCAGATGAACTGTCATCTTCTTATATGAGCCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60706879 295 + 64156825 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55863998 295 + 59248254 TGAGTATTGCAGACACTCCTACACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATGCACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATTACCACCTCCTACCCCTGACAGTGCCTGAGACTCCATGAGCAGACACT-GCTGGGAACAGGGAAGAATTCAATCCAAGTCACTCTAACTAGGAGTAAGTTTTCTTCCATATCAGATGAACTGTCATCTTCTTATATGAGTCCTGCCATAATGGAGATTACACAGACAGGAAGAGCTATTTT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47953682 274 + 51301725 TGAGTATTGCAGACAGTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGAATG-------------CTGCTTCCCCTTGCACTGCTCAGA--GAGCATATCTGAT---CACCTCCTACCCCTGACAGTGCCTGAGACTCCAGAAGCAGACACCGGCTGGGAACAGGGAAGAATTCAATCCAAGTCACT----CTAGGAGTAAGTTTTCTTCCGCATCAGATGAACTGTCATCTTCTTATGTGAGTCCCGCCATAATGGAGATTACACAGACAGgaagagctatttt i papAnu2.chr19 C 0 I 954 s chlSab2.chr6 47653454 294 + 50890351 TGAGTATTGCAGACACTCCTGCACTTACCTGTCCATGTTTATCA---CCCCCACCAAACTGGGATACACCTCTGGGCACCTGCTTCCCCTTGCACTGCTCAGAGCGAGCATATCTGATCACCACCTCCTACCCCTGACAGTGCCTGAGACTCCAGGAGGAGACACC-GCTGGGAACAGGGAAGAATTCAA-CCAAGTCACTCTAACTAGGAGAAAGTTTTCTTCCGCATCAGATGAAGTGTCATCTTCTTATGAGAGTCCTGCCATAATGGAGATTACACAGGCAGGAAGAGCTATTTT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65287 296 + 138250 TGAGTATCGCAGACACTCCCGCACTTACCTGTCCATGTTTGTTACCCCCCCCCCCAAACCGGGATGCACCTCTGGGCACCTGCTTTCCCTTGCACTGCTCAGAGCAAGCATATTTGATCACCACCTCCTACCCCTGACAGTGTCTGAGGCCCCAGAAGCAGATGCC-GCTGGAAAC--GGAAGAATTCGACCCAAGTCGCTCTGACCAGGAGTAAGTTTTCTTCCCCCTCATATGAACTGTCATCTTCTTACAGGAGTCCTGCCATAATGGAGATTACTCAGGCAGAAAGAGCTATTTT i calJac3.chr22_GL285922_random I 306 C 0 e canFam3.chr1 20139810 2211 - 122678785 I a score=31836.000000 s hg38.chr19_GL949753v2_alt 776286 12 + 796479 AAGACCTTAGTC s panTro4.chr19 59977327 12 + 63644993 AAGACCTTAGTC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929779 12 + 60714840 AAGACCTTAGTC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398121 12 - 106955855 AAGACCTTAGTC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707174 12 + 64156825 AAGACCTTAGTC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864293 12 + 59248254 AAGACCTTAGTC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653748 12 + 50890351 AAGACCTTAGTC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65583 12 + 138250 AAGACCTTAGTC i calJac3.chr22_GL285922_random C 0 I 195 e canFam3.chr1 20139810 2211 - 122678785 I e papAnu2.chr19 47953956 954 + 51301725 I a score=238373.000000 s hg38.chr19_GL949753v2_alt 776298 147 + 796479 AATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagattgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg s panTro4.chr19 59977339 147 + 63644993 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgataccagcctggccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagctggatgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929791 147 + 60714840 CATggccgggcatggtggctcacacctgtaatcccagcactttgggaggccgagacagatggatcacgaggtcaggagatcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac--aaaaattagctggatgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398133 137 - 106955855 CATggccgggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggaggatcacgaggtcaggagatcgagac------------cacagtgaaaccccgtctctactaaaaatacaaaaaaattagccgggcgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60707186 147 + 64156825 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864305 147 + 59248254 CATggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggtggaggtggacggatcacgaggtcaggagatcgagaccatcctagccaacatggtgaaaccctgtctctactaaaaatac--aaaaattagccggttgtg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47653760 145 + 50890351 CATggccggatatggtggttcacacctgtaatcgcagcac-ttgggaggcggaggtggacggatcacgaggtcaggagattgagaccat-ctggccaacatggtgaaaccctgtctttactaaatatac--aaaaattagccggttgtg i chlSab2.chr6 C 0 I 316 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=214506.000000 s hg38.chr19_GL949753v2_alt 776445 146 + 796479 gtggcactcacctgtagtcccagctactcag-gaggccgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- s panTro4.chr19 59977486 146 + 63644993 gtggcactcacctgtagtcccagctactcag-gaggctgaagcaggagcatcacttgaactcgggaggtggaggttgcagtgagccgagattgccctactgcattccagcct-ggcgacagagtgaaattctgtcaaaaaa--------------------------aa-----aaaaa--------------------------------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56929938 172 + 60714840 gtggtgctcacctgtagtcccagctactcag-gaggctgaagcaggagaatcacttgaactcacgaggtggaggttgcagtgagctgagattgccctactgcattccagcct-ggcgacagagtgaaattgtgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCCAA-----AAAAA--------------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398270 148 - 106955855 gtggcgggcacctgtggtcccagctactcggagaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaa--------------------------aa-----ataaa--------------------------------------- i nomLeu3.chr10 C 0 I 25 s rheMac3.chr19 60707333 169 + 64156825 gtggcgctcccctgtagtccccgctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcaggggttgaagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaagacaa----aa------------aaacaaaaCAAAACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864452 173 + 59248254 gtgacgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcattccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aa-----aaaaaaaaaaaagacaa------------aaaaaaaaaaaaaCA i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654221 190 + 50890351 gtggcgctcacctgtagtcccagctattcag-gaggctgaggcaggagaatcacttgaactcgggaggcagaggttgcagtgagccgagatcgccctactgcgttccagcct-ggcgacagagtgaaactctgtcaaaaaa--------------------------aaaacccaaaaaaaacaaacacaaacaaaaacaaacaaacaaaaaaaaaca i chlSab2.chr6 I 316 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e papAnu2.chr19 47953956 954 + 51301725 I a score=54224.000000 s hg38.chr19_GL949753v2_alt 776591 40 + 796479 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG s panTro4.chr19 59977632 40 + 63644993 CCTTAGGCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i panTro4.chr19 C 0 I 760 s ponAbe2.chr19 56930110 40 + 60714840 CCTTAGTCCTGtaaaccttaagctctcaccatctcaaatg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707502 40 + 64156825 CCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55864625 40 + 59248254 CCTTAGTCCTGTAGACCTTAAGCTCTcaccatctcaaacg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47654411 40 + 50890351 cCTTAGTCCTGTAGACCTTAAGCTCTCACCATCTCAAACG i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I a score=32439.000000 s hg38.chr19_GL949753v2_alt 776631 36 + 796479 TATtaaaccagttacacaatgccaaatgctgtataa s ponAbe2.chr19 56930150 36 + 60714840 tattaaaccagttacacaatgccaaatgctgtataa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60707542 36 + 64156825 TATTAAACCAGTTACACAATGACAAATGCTGTATAA i rheMac3.chr19 C 0 I 669 s macFas5.chr19 55864665 36 + 59248254 tattaaaccagttacacaatgacaaatgctgtataa i macFas5.chr19 C 0 I 12 s chlSab2.chr6 47654451 36 + 50890351 TATtaaaccagttacacaatgacaaatgctgtataa i chlSab2.chr6 C 0 I 12 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e panTro4.chr19 59977672 760 + 63644993 I a score=44231.000000 s hg38.chr19_GL949753v2_alt 776667 91 + 796479 gaggcacttggaggagtcaaattcatagagacagaaaac-agagtggtggctgcagggggctg---gagatgagattgggaagtcacaggatttg s ponAbe2.chr19 56930186 95 + 60714840 aaggcacttggagaactcaaattcatagagacagaaaacaaaagtggtggctgcaaggggctgcaagagatgagatggggaagtcacaggatttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864713 95 + 59248254 gaggcacttggaggagtcaaattcatagagacagaaaataagagtggtggctgccaggggctggaggagatgagattgggaagtCGCAGGATTTG i macFas5.chr19 I 12 C 0 s chlSab2.chr6 47654499 94 + 50890351 gaggcacttggaggagtcaaattcatagagacagaaaat-agagtggtggctgccaggggttggaagagatgagattgggaagtcaCAGGATTTG i chlSab2.chr6 I 12 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e papAnu2.chr19 47953956 954 + 51301725 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=2730.000000 s hg38.chr19_GL949753v2_alt 776758 5 + 796479 ttttt s ponAbe2.chr19 56930281 5 + 60714840 ttttt i ponAbe2.chr19 C 0 C 0 s papAnu2.chr19 47954910 5 + 51301725 ttttt i papAnu2.chr19 I 954 C 0 s chlSab2.chr6 47654593 5 + 50890351 TTTtt i chlSab2.chr6 C 0 I 694 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e macFas5.chr19 55864808 0 + 59248254 C e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=3678.000000 s hg38.chr19_GL949753v2_alt 776763 18 + 796479 g-tttgtttgtttgttttg s ponAbe2.chr19 56930286 17 + 60714840 --tgttttgttttgttttg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864808 17 + 59248254 --tttcttgttttgttttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954915 19 + 51301725 gtttgtttgttttttgttt i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47654598 694 + 50890351 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=4730.000000 s hg38.chr19_GL949753v2_alt 776781 6 + 796479 ttttgt s ponAbe2.chr19 56930303 6 + 60714840 ttttgt i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55864825 6 + 59248254 ttttgt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954934 6 + 51301725 gtttgt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655292 6 + 50890351 ttttgt i chlSab2.chr6 I 694 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I e panTro4.chr19 59977672 760 + 63644993 I a score=222802.000000 s hg38.chr19_GL949753v2_alt 776787 219 + 796479 tttttgagagac--agtctcactgtgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaacctctgcctcctaggttcaagcgattctcctgcctcagcctcccgagtagctggggctacaggcacgtgtcaccacacccggctaa-tttttgta-tttttagtagagacggggtttcaccatgttggccaggttggtctcaaactcctgacct s panTro4.chr19 59978432 220 + 63644993 tttttgagacgc--agtcttactctgtcgcccaggctggagcgcagtggcgtgatcttggctcacctcaacctctgcctcccgaattcaagcctttctcctgcctcagcctcccgagttgctgggattacaggtgcccgccaccaagcccaggtaa-tgtttgta-tttttagtagagacgaggtttcaccatgttggccaggctggtctccagctcctgtcct i panTro4.chr19 I 760 C 0 s ponAbe2.chr19 56930309 221 + 60714840 tttTTGAgagacaaagtctcactgcgtcacccaggctggagagcagtgg-gcgatctcagctcactgcaaccttagcctcctgggttcgagcaattctcctgcctcagcctcctgagtagctggggctacaggcacgtgccaccacacctggctaa-tttttgca-tttttagtagagatggtgtttcaccatgttggccagattggactcaaactcctgacct i ponAbe2.chr19 C 0 I 308 s macFas5.chr19 55864831 222 + 59248254 tttttgagagacagagtctcactgcgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgccccctgggttcaagcaattctcctgcctcagcctcccgagtagctggggctacaggcgtgcaccaccacacccagctaa-tttttgta-tttttagtagagatggggtttcaccatgttggccaggatggtctcaaactcctgacct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47954940 223 + 51301725 tttttt-gagacagagtctcgctctgtcgcccaggctggagtgcagtggccagatctcagctcactggaagctccatctccggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccaccttgtccggctagttttttgtattttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655298 222 + 50890351 ttttt--gagacagagtctcgctctgtcgcccaggctagtgtgcagtggccggatctcagctcactgtaagctccgcctctggggtttacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccgccacctcgccccgctagttttttgtattttttagcagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=-4367.000000 s hg38.chr19_GL949753v2_alt 777006 3 + 796479 c--ag s panTro4.chr19 59978652 3 + 63644993 c--ag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930838 3 + 60714840 c--ag i ponAbe2.chr19 I 308 C 0 s macFas5.chr19 55865053 3 + 59248254 cag-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955163 1 + 51301725 c---- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655520 1 + 50890351 c---- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e rheMac3.chr19 60707578 669 + 64156825 I a score=19507.000000 s hg38.chr19_GL949753v2_alt 777009 11 + 796479 gtgatccacct s panTro4.chr19 59978655 11 + 63644993 gtgatccacct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930841 11 + 60714840 gtgatccacct i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708247 11 + 64156825 gtgatccgcct i rheMac3.chr19 I 669 C 0 s macFas5.chr19 55865056 11 + 59248254 gtgatccacct i macFas5.chr19 C 0 I 663 s papAnu2.chr19 47955164 11 + 51301725 gtgatccgccc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655521 11 + 50890351 gtgatccgccc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=122083.000000 s hg38.chr19_GL949753v2_alt 777020 72 + 796479 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--gggaagctg-ttttttaata s panTro4.chr19 59978666 72 + 63644993 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacccggcc--aggaagctg-ttttttaata i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930852 72 + 60714840 gcctcggccacccaaagtgctgggattacaggcatgagccaccgcacctggcc--gggaagctg-ttttttaata i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708258 74 + 64156825 gtctcggcctcccaaagtgctgggattacaggcttcagctaccgcgcccggccGGgggaggctg-ttttttaata i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55865730 74 + 59248254 gtctcggcctcccaaagtgctgggattacaggcttgagctaccgcgcccggccGGgggaggctg-ttttttaata i macFas5.chr19 I 663 C 0 s papAnu2.chr19 47955175 74 + 51301725 gtctcggcctcccaaagtgctgggattacaggcttgagccactgcacccggccaggggAGGCTG-ttttttaata i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655532 75 + 50890351 gtctcggcctcccaaagtgctgggattacaggcttgagtcaccgcgcccggccgggggaggctgtttttttaaca i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20139810 2211 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=86139.000000 s hg38.chr19_GL949753v2_alt 777092 43 + 796479 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt s panTro4.chr19 59978738 42 + 63644993 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930924 42 + 60714840 gatacagagttt--gttttgcaaaat-aaaaaaa-gacctgaaggt i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708332 44 + 64156825 gatacagagttt--gttttgcaaaataaaaaaaaagacctgaaggt i rheMac3.chr19 C 0 I 12 s macFas5.chr19 55865804 43 + 59248254 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955249 43 + 51301725 gatacagagttt--gttttgcaaaat-aaataaaagacctgAAGGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655607 43 + 50890351 gatacagagttt--gttttgcaaaat-aaaaaaaagacctgaaggt i chlSab2.chr6 C 0 I 12 s canFam3.chr1 20142021 44 - 122678785 ggcacagaatttcagttttgcaagat-gaaaaga-gctctggacat i canFam3.chr1 I 2211 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=6938.000000 s hg38.chr19_GL949753v2_alt 777135 11 + 796479 ggacggtggtg s panTro4.chr19 59978780 11 + 63644993 ggacggtggtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930966 11 + 60714840 ggacggtggtg i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55865847 8 + 59248254 ---cttttgtg i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47955292 8 + 51301725 ---CTTTTGTG i papAnu2.chr19 C 0 I 4 s canFam3.chr1 20142065 11 - 122678785 ggatggtggtg i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I e chlSab2.chr6 47655650 12 + 50890351 I e rheMac3.chr19 60708376 12 + 64156825 I a score=318409.000000 s hg38.chr19_GL949753v2_alt 777146 173 + 796479 atggttgcacaacaatgtgaatatacttaacatcactgaattgtacac-ttaaaatggttaagatggtacattttactttatgcatagtttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg s panTro4.chr19 59978791 173 + 63644993 atggttgcacaacaatgtgaatatacttaacatcactgaattgtatac-ttaaaatggttaagatggtacattttactttatgcatattttacca-aactaaaaaTAAAGAAAAATTTTAgactgggcatggtggctcatgcctgtaatcccagcactttgggaggccaaagtgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56930977 174 + 60714840 atggttgcacaacaatgtgaatatacttaacattactgaactgtacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaaTAAAGAAAAATTTTAggctgggcatggtggctcatgcctgtaatcccagcactttgggaggccacagtgg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708388 163 + 64156825 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i rheMac3.chr19 I 12 C 0 s macFas5.chr19 55865859 163 + 59248254 atggttgcacaacaatgtgaatatactcaacactactgaattgcacgc-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtgg i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47955304 163 + 51301725 atggttgcacaacaatgtgaatatactcaacactactgaattgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaagt----aaaaattttaggctgggcatggtgg-------cagtaatcccagcactttcggaggccaaagtGG i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47655662 163 + 50890351 atggttgcacaacaatgtgaatatactcaacgctactgaagtgcacac-ttaaaatggttaagatggtaaattttactttatgcatattttaccacaactaaaaGT----AAAAATTTTAggctgggcacggtgg-------cagtaatcccagcactttcggaggccaaagtgg i chlSab2.chr6 I 12 C 0 s canFam3.chr1 20142076 131 - 122678785 ttagttgcacaacagtgtgaatgtgcttaatgccactgaactgtacactttaaaatgattaagagagtaaattttatgtcttgtgcattttaccataattaaaaaT----AAAGA-------------AGGATgg---------------------------gacgcctgggtgg i canFam3.chr1 C 0 I 157 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=367728.000000 s hg38.chr19_GL949753v2_alt 777319 199 + 796479 agaatagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtctgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccaggc s panTro4.chr19 59978964 200 + 63644993 agaacagtatgagcccaggagtttgagagcggcctggacaacacggcaaaaccttatctctacaaaaaaatacaaaaattagcaggtttggtggcacgcatctgcaccctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccaggc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931151 199 + 60714840 agaacagtatgagcccaggagtttgagagcggcctggacaacaccgcaaaaccttatctctacaaaaaa-tacaaaaattagcaggtttggtggcacgcatctgcagcctcagctacttgggaggctgaggtgggaggtttgcttgagcccaggaggtcgaggctatgatgagccgtgattgtgccactgcaccccagcc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708551 199 + 64156825 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgcgccactgcaccccagcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866022 199 + 59248254 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagccgtgattgtgccactgcaccccagcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955467 199 + 51301725 AGAATAgcatgagcccagaagtttgagaccagcctggacaacatggcaaaaccttatctctacaaaaaa-aacaaaaattagcaggcttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtcaaggctatgatgagctgtgattgtgccactgcaccccagcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47655825 199 + 50890351 agaatagcatgagcccagaagtttgagaccagcctggacaacacggcaaaaccttatctctacaaaaaa-tacaaaaattagcagacttggtggcatgcatctgcggcctcagctacttgggaggctgaggtgggaggattgcttgagcccaggaggtgaaggctatgatgagccgtgattgtgccactgcaccccagcc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20142207 157 - 122678785 I e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=38479.000000 s hg38.chr19_GL949753v2_alt 777518 31 + 796479 tgggtgacagagcaagaccc---catctcaaaaa s panTro4.chr19 59979164 31 + 63644993 tgggtgacagagcaagaccc---catctcaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931350 31 + 60714840 tgggtgacagagcaagactc---cgtctcaaaaa i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60708750 29 + 64156825 tgggtgacacagcaagaccc---tgtctcaaa-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866221 29 + 59248254 tgggtgacacagcaagaccc---tgtctcaaa-- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955666 29 + 51301725 tggatgacacagcaagaccc---tgtctcaaa-- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656024 29 + 50890351 tgggtgacagagccagaccc---tgtctcaaa-- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142364 31 - 122678785 taaataatatataaaaatataaataaataaa--- i canFam3.chr1 I 157 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I e nomLeu3.chr10 103398418 25 - 106955855 I a score=642346.000000 s hg38.chr19_GL949753v2_alt 777549 273 + 796479 taataataataa---------aTGTTTACATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCCC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgatccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa s panTro4.chr19 59979195 273 + 63644993 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAAAA----------CAACACTGTTTTTCTC--TGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagagagtaaataatttcagctttgtgacccacacagtggctgttgcacctcctctgccagaggagctgggaagcagccacagatgatgtgaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931381 280 + 60714840 taataataataa---------aTGTTTAAATTTAAT----AACATGGGCA--ATTGGTTCAGATGTTCATTTTCTCAATCTTGGAAAAAAAAAAAAA----------AAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACTTCCAGGAcagagatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagctttgtgacccacacagtgcctgttgcacctactctgccataggagctgggaagcagccatagatgatatgaaaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103398443 272 - 106955855 taataataataa---------ATGTTTAAATTTAAT----AACATGGACA--ATTGGTTCAGATGTTCATTTTCTCAACCTTG-----AAAAAAA-------------AACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCATTGACCTCCACGAcagggatt----------------------------------agcaaac-tttttctacaaacagtcagatagtaaataatttcagccttgtgacccacacagtggctgctgcacctactctgccacaggagctgggacgcagccatagatggtatgataa i nomLeu3.chr10 I 25 I 1994 s rheMac3.chr19 60708779 272 + 64156825 -aataataaTGA---------ATGTTTACATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG---AAAAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866250 270 + 59248254 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCA--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAA--------------ACTGTTTTTCTCTATATCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcaggtatc----------------------------------agcaaac-tttttctacgaacagccagatagtaaataatttcagacttgtgacccatacagtggctcttgcacctcctctgccatagtaactgggaagcagtcatagatgatatgaaaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955695 270 + 51301725 -aataataataa---------atgtttaaatttaat----aaCACGGGCA--ATTGGTTCAGATGCTCATTTTCtcaaccttg------aaaaaaaa--------------actgtttttctctatatctttttctccttttctgtaaaCTGAAATCCTAATATCACTGACCTCCAGGACAGGTATC----------------------------------AGCAAACTTTTTTCTACGAAcagccagatagtaaataatCTCAGACTTGTGACCCATACAGTGGCTCTTGCACCTCCTCTGCCATAGTAACTGGGAAGCAATCGTAGATGATATGAAAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656053 284 + 50890351 -aataataataa---------aTGTTTAAATTTAAT----AACACGGGCG--ATTGGTTCAGATGCTCATTTTCTCAACCTTG-----AAAAAAAAAATAAATGAATAAACACTGTTTTTCTCTATGTCTTTTTCTCCTTTTCTGTAAACTGAAATCCTAATATCACTGACCTCCAGGAcagggatc----------------------------------agcaaac-tttttctacaaacagccagatagtaaataatttcagacttgtgacccacacagtggccgttgtacctcctctgccatagtaactggggagcagtcatagatgatatgaaaa i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142395 295 - 122678785 taataaaaataaaGAAGGAGGAGGTCTGAAGAGGAGAGAAAACATGGGCACTGTATATTCAGATTCTGGTCCTCACAGCTTTG-----AATAAAGCA-------------------TTTCCTCTCAGCCTTTGTT--------------------TTCTAATATCATCTACCTCAAGGGTAGGGttttcttttttttttttttttttttttttttttttAAGGGTAGG-Gttttctgcaaaggacaggatagtaaataatttcgtcctcgtgggccatatggtccctactgcaactattctgccattatagcaggaaagccaccatagacaagatgcaca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=203527.000000 s hg38.chr19_GL949753v2_alt 777822 79 + 796479 caagtgagca-cagctgtgttcccataaaa--ctttatttat-aaaaataagcagtgcgccacagttcgccagcTCCTGTTTG s panTro4.chr19 59979468 79 + 63644993 caagtgagca-cagctgtgttcccataaaa--ctttatttac-aaaaataagcagtgCCCCACAGTTCGCCAGCTCCTGTTTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931661 79 + 60714840 caagtgagca-tagctgtgttcccataaca--ctttatttac-aaaaataagctgtgggccacagtttgccagcTCCTGTTTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400709 80 - 106955855 caagtgagca-tagctgtgttcccataaaaacttttatttac-aaaaataagcagtgggccACAGTTTACCAGCTCC-ATTTG i nomLeu3.chr10 I 1994 C 0 s rheMac3.chr19 60709051 78 + 64156825 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866520 78 + 59248254 caagtgagca-tagctgtgtt-ccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTGTTTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47955965 79 + 51301725 CAAGTGAGCA-TAGCTGTGttcccataaaa--ctttattttc-aaaaacaagcagtgggccATAGTCTGCCAGCTCCTgtttg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656337 79 + 50890351 caagtaagca-cagctgtgttcccataaaa--ctttattttc-aaaaataagcagtgggccATAGTCTGCCAGCTCCTGTTTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20142690 74 - 122678785 caaatgagcattagctgtgttctaataaaa--ctttatttacaaaaaataagcaatgggccatagtttgccagcTC------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 65595 195 + 138250 I a score=163497.000000 s hg38.chr19_GL949753v2_alt 777901 58 + 796479 Agagtctctctccgatgcccaggctggagcgcagtgatgcaatctcagctcactgcaa s panTro4.chr19 59979547 58 + 63644993 Agagtctgtctccgatgcccaggctggagtgcagtggtgcaatctcagctcactgcaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56931740 58 + 60714840 Agagtctctctccgatgcccaggctggagcgcagtagcgcaatctcagctcactgcaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400789 58 - 106955855 Agagtctctctccgatgcccaggctggagcacagtggcgcaatctcagctcactgcaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709129 58 + 64156825 Agagtctcgctccgatgcccaggctggagtacagtgatgcaatctcagctcactgcaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866598 58 + 59248254 Agagtctcgctccgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956044 58 + 51301725 agagtctcgctctgatgcccaggctggagtacagtgacgcaatctcagctcactgcaa i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656416 58 + 50890351 Agagtctcgctccgatgcccaggctagagtgcagtggtgcaatctcggctcactgcaa i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65790 58 + 138250 agagtctcgctgtgttgcccaggctggagggcagcagcacaatctcagctcactgcaa i calJac3.chr22_GL285922_random I 195 C 0 s canFam3.chr1 20142764 7 - 122678785 ---------------------------------------------------ACTGTAA i canFam3.chr1 C 0 C 0 a score=692333.000000 s hg38.chr19_GL949753v2_alt 777959 229 + 796479 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT s panTro4.chr19 59979605 229 + 63644993 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccgccacacctggctgatttttgtatttttagtagagacggggtttcaccatgttggccaggctggttttgaactccaggcttcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagcTACCTGTCAT i panTro4.chr19 C 0 M 1933 s ponAbe2.chr19 56931798 229 + 60714840 cctctgcctcctgggttcaagtgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacagggttttgccatgttggccaggctggtttcgaactccatacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagcgtgagccactgcgcccagctACCTGTCAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103400847 229 - 106955855 cctctgcctccggggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggcgctcgccaccacacctggctaatttttgtatttttagtagagacggggttttgccatgttggccaggccagtttcgaactccagacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaaagtgtgagccaccgcgcccagcTACCTGTCAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709187 229 + 64156825 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaccacgcctggctaatttttgtatttttagtagagatggggttttgccgtgttggccaggctgggttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866656 229 + 59248254 cctctgcctcctgggttcaagcgattctcctgcctcagcctcatgagtagctgggattacaggtgctcgccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956102 229 + 51301725 cctctgcctcttgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgctcgtcaacacgcctggctaatttttgtatttttagtagagatgcggttttgccgtgttggccaggctggtttcgaactccggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggctacctGTCAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656474 229 + 50890351 cctctgcctcctgggttcaagcgattctcctgtctcagcctcatgagtagctgggattacaggtgctagccaacacgcctggctaatttttgtatttttagtagagacggggttttgccgtgttggccaggctggtttcgaactctggacctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcaaagtgtgagccaccgcgcccggcTACCTGTCAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 65848 226 + 138250 actccacctcccgggttcaagcaattctcctaccttggcctc-tgagtag-tgggattacaggagcacagcaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtgatccacccacctcagccttccaaagtgctgggattac-aggcgtgagccactgtggccagccCCCTGTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C a score=5348.000000 s hg38.chr19_GL949753v2_alt 778188 2 + 796479 TG s ponAbe2.chr19 56932027 2 + 60714840 TG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401076 2 - 106955855 TG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709416 2 + 64156825 TG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866885 2 + 59248254 TG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956331 2 + 51301725 TG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656703 2 + 50890351 TG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66074 2 + 138250 TG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20142771 0 - 122678785 C e panTro4.chr19 59979834 1933 + 63644993 M a score=932919.000000 s hg38.chr19_GL949753v2_alt 778190 340 + 796479 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCATATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTGTTTGGACTCCAGGTGGGCTGTCCACGCCTTTACCATTTTCCTGGTTGTTAACATGTTCCTGATCAGCACTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCACAT----tctgtctc s ponAbe2.chr19 56932029 342 + 60714840 AATTTAGAAGGATGGCATGAAGTCATTCAAAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTGATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---TCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTAACAAGTTCCTGATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGAGTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTACGGCACCCAATTCTCATTCACAT--tctctctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401078 344 - 106955855 AATTTGGAAGGATGGCATGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCTGTTAATATGGTTATTATAAAGAGAACAATGCATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGGGAGTTAGAACATCTATTTGGACTCCGGGTGGGCTGTCCACCCCTTTACCATTTTCCTGGTTGTTATCAAGGTCCTTATCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCTATCAGAGGCTTTATGGCACCCAATTCTCATTCACATtctctctctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709418 339 + 64156825 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATTCTCATTCTCAT--tctctctctc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55866887 335 + 59248254 AATTTGGAAGGATGACGTGAAGTCATTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat------tctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956333 339 + 51301725 AATTTGGAAGGATGACATGAAGTCGTTCATAACAAGGACTTAATCCATAGTAAGTGCCAGAACATTGCTGGCCGTTAGTATGGTTATTATAAAGAGAACAACGCATGCAAATTCC-TCCTCTGAAGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATCGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCaattctcattctcat--tctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47656705 339 + 50890351 AATTTGGAAGGATGACATGAAGTCATTCATAACAAGGACTTACTCCATAGTAAGTACCAGAACATTGCTGGCTGTTAGTATGGTTATTATAAAGAGAACAACACATGCAAATTCC-TCCTCTGAGGA---CCTCCTACCTGATTCCCAGACACACCCAAGAGAGTTAGAACATCTATTTGGACTCCAGGTGGGCTGTGCACCCCTTTACCATTTTCCTGGTTGTT---AAGTTCCTGGTCAGCATTGGGTGCTGTCCCAGGTGCTGAGAGGATTCTCCCACAATGCCCTTTGCTTTCCCCATCAGAGGGTTTATGGCACCCAATtctcattctcat--tctctctctc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66076 340 + 138250 AATTTGGAAGGATGACATGAAGTCATCCATAACAAGGACTTAATCCATAGTAAGTGCCAGATCATTGCTGGCTGTTAACACTGTTATCACAAAGAGAACAATTTGTGCAAATTTG-TCCTCTGAGGACCTCCTCCTACCTGACTCCCAGACACACCCAAGGGAGTTAAAACATCTATTTGGATTCCCCGTGGGCTGTCCACCCCTTCACCATTTTTCTCGTTAAC---AAATTCCTGATCAGCATTAGGTGCTGTCCCGGGTCCTGAAAGGATTCTCCCACAATGCCCTTTGCTTTCCGCATCAGAGGGTTTATGGCACCCAGTTCTCATTCTCAT----TCTCTCTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20142771 328 - 122678785 AGTCTGGAAGGTTGACATACAGTCATTCACAAGAAGGACCTAA--CACAGTAAGTACCAGAACATTGCTGGCTGCTAAAGTAGTTATTATACAGGAAATAATGTATGCAAATTCCTTTCTCTGAGGA---CCTCCCACCTGGTTCCCAGACACACCCAAGGTGTTAAGAAACTCTCTTTGGACTCCAGGTAGGCTATGCTCCTCTTTATCACTGTTGATGTTCCT---GAATTCTTGATAACCATCGGGTGCTGTCCCAGGTGCTGAGAGACTTCTCCCGCAAAGCCCTCTGCTTTCCCTATCAG-GGGCTTACAGCCCAAAAT---------CAT--TCTCTGTCTC i canFam3.chr1 C 0 I 1683 e panTro4.chr19 59979834 1933 + 63644993 M a score=39291.000000 s hg38.chr19_GL949753v2_alt 778530 25 + 796479 tcctttctcgttcttctctatctct s ponAbe2.chr19 56932371 25 + 60714840 tcctttctcgttcttctctatctct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401422 24 - 106955855 tcctttctcgttc-tctctctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709757 25 + 64156825 tcctttcttgttcttctctaactct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867222 25 + 59248254 tcctttcttgttcttctctaactct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956672 25 + 51301725 tcctttcttgttcttctctaactct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657044 25 + 50890351 tcctttcttgttcttttctgactct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66416 25 + 138250 TATTTGATCACCACCTCCTACCCCT i calJac3.chr22_GL285922_random C 0 I 78 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=11034.000000 s hg38.chr19_GL949753v2_alt 778555 15 + 796479 cctctctct-gtctcc----- s ponAbe2.chr19 56932396 15 + 60714840 cctctctct-ctctcc----- i ponAbe2.chr19 C 0 I 244 s nomLeu3.chr10 103401446 15 - 106955855 tctctttcc-ctctct----- i nomLeu3.chr10 C 0 I 10 s rheMac3.chr19 60709782 20 + 64156825 cctctctct-ccccccctcct i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867247 20 + 59248254 cctctctct-ccccccctcct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956697 21 + 51301725 cctctctctcccccccctcct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657069 9 + 50890351 cctctctct------------ i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6840.000000 s hg38.chr19_GL949753v2_alt 778570 5 + 796479 ttttc s ponAbe2.chr19 56932655 5 + 60714840 ttttc i ponAbe2.chr19 I 244 C 0 s nomLeu3.chr10 103401471 5 - 106955855 ttttc i nomLeu3.chr10 I 10 C 0 s rheMac3.chr19 60709802 5 + 64156825 ttttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867267 5 + 59248254 ttttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956718 5 + 51301725 ttttc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657078 1 + 50890351 ----c i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66441 78 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=33636.000000 s hg38.chr19_GL949753v2_alt 778575 35 + 796479 tcttcctctctccctc-tctgtcttctctccctctc s ponAbe2.chr19 56932660 31 + 60714840 tcttcctctctccct-----gtcttctctccctctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401476 33 - 106955855 tcttcctctctccct---ctgtcttctctccctctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709807 36 + 64156825 tcttcctctctctctcctctgttttctctctctctc i rheMac3.chr19 C 0 I 120 s macFas5.chr19 55867272 35 + 59248254 tcttcctctctctctcctctgttttctctctctct- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956723 24 + 51301725 tcttcttctctctctcctctgttt------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657079 16 + 50890351 tctccctctctctctc-------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66519 32 + 138250 tctctctctctccctc----tctttctattcctctc i calJac3.chr22_GL285922_random I 78 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=57571.000000 s hg38.chr19_GL949753v2_alt 778610 172 + 796479 tc-tccctctctcttcctctct--------------ctcttcctct---------gtcctct----tttctc-------tctctctctccctctctctcaca----tctctctttc--ccttcctttctctttc------ctctct------cttcctctctccctctccctccttct----gtcttcctctatccctctct--tcctct-------tttttcttcctctct--tcttgt s ponAbe2.chr19 56932691 211 + 60714840 tc-tccctctctcttcctctctttct--------ctctcttcctct-------ctgtcctctct--tttctc---cctgtctctctctccctctctctctcacatctctctctttc--ccttcctttctctttc------ctctctttctgtcttcctctctccctctccctccttctctctgtcttcctctctccctctctcttcctctctctccttttttcttcctctctcttctcgt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401509 216 - 106955855 tc-tccctctctctgcctctctctctgtcttctcttttctccctctctcatctctttcccttct--tttctctttcctctctttctcttcctctctccctt-----tccctccttctgtcttcctctctccctc-----tccctccttctgtcttcctctctccctctccctccttct----gtcttcctctctccctctctcttcctct-----ctcttttcttcctctct--tcttgt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55867307 134 + 59248254 ---------------cctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------cctctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956747 143 + 51301725 ---tatctctctc-tcctctgt---------------tttctctct-------gtctcctctct--tttctc-----------------c--ctctctcacacacacacgtctttc--ccttcctttctctttctctttcctctctctcttcctctctctctccctctccctccttctctctgtcttcctct------------------------------------------------ i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657095 115 + 50890351 tctcctttttctcttcctctct---------------ctctcctct-------gtcttctctctcctttctc-----------------cctctctctcacacacacacgtgtttc--ccttcctttctctttc--------------ctctctttctctcttcctctcc---------------------------------------------------------------------- i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66551 116 + 138250 -----------tctccgtctct--------------cttttcctct-------cacttctctctc-cctctc-----------------accctctatctca----------tctc--tctccccatctcaccc----------ctctccgccttcctctttctctctcctttcttcc---tctcttcttg------------------------------------------------- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e rheMac3.chr19 60709843 120 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6292.000000 s hg38.chr19_GL949753v2_alt 778782 12 + 796479 ctctttctctcc s ponAbe2.chr19 56932902 12 + 60714840 ctctttctctcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401725 12 - 106955855 ctctttctctcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709963 8 + 64156825 ----ctctttcc i rheMac3.chr19 I 120 C 0 s calJac3.chr22_GL285922_random 66667 7 + 138250 -----tctctcc i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e chlSab2.chr6 47657210 0 + 50890351 C e papAnu2.chr19 47956890 0 + 51301725 C e macFas5.chr19 55867441 0 + 59248254 C e panTro4.chr19 59979834 1933 + 63644993 M a score=95779.000000 s hg38.chr19_GL949753v2_alt 778794 107 + 796479 tctctctctccctctttctctttctctctctcttcctctc--ccttcctcttcctctctctccttctttct---tcctctctctcttcttgtgtgtg---------------tctctctctctc--------tgt s ponAbe2.chr19 56932914 115 + 60714840 tctctctctccctctctctccttctctctctcttcctctctccctccctcttcctctctctccttctttct---tcctctctctcttcttgtctctc---------------tctctctctctc--ctctcttct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401737 99 - 106955855 tctctccctctctc-----------ctctctcttcctctc--cctccctcttcctctctct-----gttct---tcctctctctcttcttgtctctc---------------tctctctctcctctctctcttct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60709971 121 + 64156825 tctctctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctctccttttttct---tcctctctctcttcttgtctctctcccctctctcttcttctctctctctt----------- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867441 90 + 59248254 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttcttctctctc---------------tctctctctctt----------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956890 82 + 51301725 -----------------ctccttctctcttcct--ctctctccttttttcttcctctctctcttcttgtctctctcccctctctcttct-----------------------tctccctctctt----------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657210 101 + 50890351 -----ctctccctctccctccttctctctgtcttcctctctccttctctcttcctctctc---ttttttct---tcctctctctcttcttgtctctctcc------------cctctctcttct----------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66674 0 + 138250 C e panTro4.chr19 59979834 1933 + 63644993 M a score=146470.000000 s hg38.chr19_GL949753v2_alt 778901 62 + 796479 tctctctctccctctccccccaactctctttccctACACACATCTTAAGAGGCCTCAGCAGT s ponAbe2.chr19 56933029 62 + 60714840 tctctctctccctctccccccaactctctctccctACACACATCTTAAGAGGGCTCAGCAGT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103401836 62 - 106955855 tctctctctccctctccccccaactctctctccctACACACATCTTGAGAGGCCTCAGCAGT i nomLeu3.chr10 C 0 M 2007 s rheMac3.chr19 60710092 62 + 64156825 tctctctctccctctcCCCCCAGCTCTCTCTACCTACATACATCTTCAGAAGCCTCAGCAGT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867531 62 + 59248254 tctctctctccctctccccccagctctctctACCTACATACATCTTCAGAAGCCTCAGCAGT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47956972 62 + 51301725 tccctctctccctctccccccagctctctctACCTACATACATCTTGAGAAGCCTCAGCAGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657311 62 + 50890351 tctctctctccctctccccccaactctctctccctACATACATCTTGAGAAGCCTCAGCAGT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66674 62 + 138250 tctctctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=473290.000000 s hg38.chr19_GL949753v2_alt 778963 300 + 796479 GTAAGGTAAGTTTAGCGACCCTGTGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagtggtcccagactccagccatttgagtctttgcagcccaagcactgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatggtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttatatggccatagtaactggaaTGATTGCTGTAGGTTTATTTTA--TTTTATT s ponAbe2.chr19 56933091 299 + 60714840 GTAAGGTAAGTTTAGCGACCCTGAGGCTGTGTAGAGATAAGCAAAGGGGGGCaaggagctccagttgtcc-agactccagccgtttgagtctttccagcccaagcaccgccccagcttcttgacagccccagccatcaccaaagggcacacagataagctgcctccaccaaggcctgtgcagatagtaggtttttgagtaaaatagatatgatccttgtctgaagccactgagttttagaataatttgttacatggccatagtaactggaaTTATTGCTCTAGGTTTATTTTG--TTTTATT i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710154 294 + 64156825 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAACGAGctccagttgtcccagactccagccgtttgaatatttccagcccaagcacctccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagttttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55867593 294 + 59248254 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCGGAGATAAGCACA-CGAGCCAACGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAATCTTTCCAGCCCAAGCACCTccccagcttcttgccagccccagccatcaccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaagtttttgagcaaaataaatacggtccttgtctgaagccactgagctttagaataatttgttatatggctgtagtaactggaaTGATTGCTCTAGG-----TTTA--TTTTATT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957034 298 + 51301725 GTAAGGTAAGCTTAGCTGCCCTGAAGCTGTGCAGAGACAATCACA-GGGGCCAACGAGCTCCACTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTCCCCAGCTTCTTGCCGACCCCAGCCATCACCAAAGGGCACACAGATAAGCTGCCTCCACCAGGGCCTGTGCAGATGGTAGGTTTTTGAGCAAAATAGATATGGTCCTTGTCTGAAGCCACTGAGTTTTAGAATAATTTGTTATATGGCTGCAGTAACTGGAATGATTGCtctaggttta-ttta--ttttatt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657373 298 + 50890351 GTAAGGTAAGTTTAGCTACCCTGAAGCTGTGCAGAGATAAGCACA-GGGGCCAATGAGCTCCAGTTGTCCCAGACTCCAGCCGTTTGAGTCTTTCCAGCCCAAGCACCTccccagtttcttgccaaccccagccatcgccaaagggcacacagataagctgcctccaccagggcctgtgcagatggtaggtttttgagcaaaataaatatggtccttgtctgaagccactgagttttagaataatttgttatatggctgcagtaactggaaTGATTGCTCTAGGTTTA-TTTA--TTTTATT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66736 284 + 138250 GTAAGATGAGTTTAGCTACCCCAAAGCTCTGTCGAGATAAGAACG-GGGGCCAAGGAGCTCCAGCTGTCCCAGACTCT----------GTCTTTCCAGCTCAGGCACCTCTCCAGCTTCTT-----CCAGAGCCATCACCAAAGGGCGCGCagataagcgacctccaccaagccctgtgcatacagtagattattgagcaaaataaatatggtccttgtctgaagccactgggttttagaataatttgttacatgcctgtagtaactACAATGATTTCTCCGGGttt--tttaacttttatt i calJac3.chr22_GL285922_random C 0 T 342 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=966428.000000 s hg38.chr19_GL949753v2_alt 779263 773 + 796479 CATCCTTGCTGCATGCAACACAT-GCATGGCTCAGTAACTAGAaggaaagaagagaagaagggagggagaggcagagggtggacaggagaggatggtaggaaggaaaga---caggaaaggagGGTGTTGGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCCGTGTCGGAGAGCTGGGCAAGC-TTTCTGCAGGAAATGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccgggctgtgggaacagcttaagcagaaggcatgggacaggaatgcatatgagagatattgtgggaggagggaggg-ctgcctgggctggcatgcagggtatgggagggggtggaagggctgaggcgggagcc--atcagtaaaaggacccagagcgcggctccaatgccatggtaggaagcttggcgttgactcagagggcgctgggtaccgctgaagagtgttgagccaaggagggtcatgtcacgggcagatacatgttttagaatttct-tcttttctggctgagatgtagagtatggactggagagaagcacaggggacataggaaaggtagttCTAGAAAGAGGGGCTGTCCCACCAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTCCCTTCCAGCTCATGGCACTAAAGCCACTGATTGATTAGCTGGGTGCTATCAatctctctctc s ponAbe2.chr19 56933390 770 + 60714840 CATCCTTGCTGCGTGCAACACAT-GCATGGCTCAATAACTAgaaggaaagaagagaagaagcgaggaaggggcagagggtggataggagaggatggtaggaaggaaagaagacaggaaaggaggGTGTTAGTGGCCTTGCCTGCAAGCTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGTCCCTGTGTCGGAGGGCTGGGCAAGC-TTTCTGCAGGAAGTGATGGGGATCACGGCCATGTGAGCCGGCAAGATTTCCCTCAGCCAgggaggagactccaggctgtgggaacagcttaagcagaaggcatgggacaggaatgcag--cggagatattgtgggaggagggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagtaaaaggacccagagcgcggctccaatgccatcgtaagaagcttggcgttgactcagagggcgctgggtactgctgaagagtgttgagccacggagggtca-----cgggcaggtacatgttttagaatttct-tcttttctagctgagatgtagagtatggactggagagaagcaccggggacataggaaaggtagttCTAGAAAGAGGGACTGTCCCACTAGGGAAAGTCAACCAACTGTTCCCCAGTATCCATTCCTGCCTTCTAGCTCATGGTACTAAAGCCAGTGATTGATTAGCTGGGTGCCATCAAtctctctctc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60710448 769 + 64156825 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAgaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagggtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGCAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGGTATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAATCTCTCTCTC i rheMac3.chr19 C 0 I 13 s macFas5.chr19 55867887 769 + 59248254 CATCCTCGCTGCATGCAGCACGTGGCATGGCTCAGTAACTAGaaggaaagaaaagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAGCAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGttggagagctgggcaagcttttctgtaggaaatgatggggatcacggccatgtgagccggcaggatttcctccagccaggagggagactccaggctgtgggaacagcttaagcagaaggcaggggacaggaatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcgtagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtcg-----tgggcagatacgtgctttagaattgctgttttttctggctgagatgtagagtatggactggagaggagcacaggggacataggaagggcagttctagaaggAGGAACTGTCCCACTAAGGAAAGTCAAGTAAC--TTCCTCGATATCCATTCTTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47957332 768 + 51301725 catcctcGCTGCATGCAGCACGTGGCATGGCTCAGTAactagaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaacaagacaggaaaggagCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGATGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAACTGGGCAAGC-TTTCTGTGAGAAATGATGGGGATCAC--CCCTGTGAGCCGGTAGGATTTCCTCCAGCCAGGAGGGAGACTCCAGGCTGTGGGAACAGCTTAAGCAGAAGGCAGGAGACAGGAATGCAG--GAGAGCTAttgtgggagaggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcAGGAGCCAGATGAGT-AAAGGACCCAGAGCGTGGCTCCAATGCCATGGTAGGAAGCTTGGCGTAGACTCAGAGGGTGCTGGGTACCACTGAAGAGTGTTAAGCCACAGAGGGTCG-----TGGGCAGATACGTGCTTTAGAATTGCTGTTTTTTCTGGCTGAGATGTAGAGTATGGACTGGAGAGGAGCACAGGGGACATAGGAAGGGCAGTTCTAGAAGGAGGAACTGTCTCACTAAGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCCTCCCTTCCGGCTCACGGCACTAGAGCCACTGATTGA-CAGCTGGGTGctatcaatctctctctc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47657671 761 + 50890351 CATCCTCGCCGCATGCAGCACGTGGCATGGCTCAATAACTAGaaggaaagaagagaagaagggagggaggggcagagggtggacaggagaggatgggaggaaggaaagaagacaggaaaggaGCGTGTTGGTGGCCTTGCCTGCAAACTGAGCAGACACCACGCAAACAGGTGACCTCCCAGTTAAGACGGAGGGGACTCAGGGCTCAGGAGGGGCAGAAGGCCCCTGTGTTGGAGAGCTGGGCAAGC-TTTCTGTAGGAAATGATGGGGATCACGGCCATGTGAGCTGGCAGGATTTCCTCCAGCCAGGAGGGAGACAccaggctgtgggaacagctgaagcagaaggc--ggggcagggatgcag--gagagctattgtgggaggggggaggggctgcctgggctggcatgcagggtatgggagggggtggaagggatgaggcaggagcc--atcagt-aaaggacccagagcgtggctccaatgccatggtaggaagcttggcatagactcagagggtgctgggtaccactgaagagtgttgagccacggagggtca-----tgggcagatacatgctttagaattgctgttttttctggttgagatgtagagtatggactggagaggagcacaggggacatagga-----agttctagaaggaggaactgtctcactaaGGAAAGTCAAGTAAC--TTCCCCAGTATCCATTCTTCCCTTCCAGCTCATGGCACTAGAGCCACTGATTGA-CAGCTGGGTGCTATCAAtctctctctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=27466.000000 s hg38.chr19_GL949753v2_alt 780036 63 + 796479 atctctct-----ctccctctttctctccccctcatctgtgtcttttctctctctcatctctctgtct s ponAbe2.chr19 56934160 51 + 60714840 atctctct-----ctccctctttctccccccctcctctgtgtcttttctctctctc------------ i ponAbe2.chr19 C 0 C 0 s macFas5.chr19 55868656 58 + 59248254 -tctctccccccacccccgctttctctccccttcctctgtgtctcctctctctctc-tct-------- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958100 61 + 51301725 -tctctctc----ccccctctttctctccccctcctctgtgtctcctctctctttc-tctctcatct- i papAnu2.chr19 C 0 I 6 s chlSab2.chr6 47658432 51 + 50890351 -tctcccccccc-ccaactctttctctccccctcctctgtgtctcctctctct--------------- i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e rheMac3.chr19 60711217 13 + 64156825 I e panTro4.chr19 59979834 1933 + 63644993 M a score=141233.000000 s hg38.chr19_GL949753v2_alt 780099 233 + 796479 ccctctttctgtccccctcctccgtg----tctcctctctctctcttctctgtctcatatctctctcattgctctctccctctttctctccc-cctcctgtgtctccttctctctctctctttctcccccatctctctttctctcccccttcctctctttctcctctcactcttcctgtttctctcttt--ctctttcttcctctctttctccctgtctctctcttcctcttttcctttg s ponAbe2.chr19 56934211 157 + 60714840 ------------------------------tctcatctctctctct-------------------------------ccctctttctgtccc-cctcctgtgtctccttctctctct---------------------ttctctcccccttcctctctttctcctctcactcttcctgtttctctctcttcctctttcttcctctcttcctccctctctctctcttcctcttttcctttg i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711230 228 + 64156825 CCCGCTTTCTCTCCCCTTCCTCTGTGtctcctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctcccccaccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctctTCCTCTTTTCCTTTG i rheMac3.chr19 I 13 C 0 s macFas5.chr19 55868714 195 + 59248254 ------------------------------ctctctctctctctctcatcgctctc---tctctctcatctctctctccctctttctctccc---ccccgtgtctccttctctctctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958167 138 + 51301725 ------------------------------ccctctttctctccc------------------------cgctctgtgtctccttctctctc----------------tctctatctctctcttt---ctctcccccttactctctc-----------------------tcttcc----tctctgttc--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47658483 187 + 50890351 ------------------------------------ctctctctctcatcactctc---tctctctcatctctctctccctctttctctccc---ccccatgtctccttctc--tctctctctct---ccatctctctttctctcccccttactctctttctcctctcagtcttcc----tctctgttt--ctctctctcttcctctttctccctctctctctcttcctcttttcctttg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 67020 342 + 138250 T e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=143213.000000 s hg38.chr19_GL949753v2_alt 780332 81 + 796479 tctctctctctccccccaactctctctccctACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA s ponAbe2.chr19 56934368 81 + 60714840 tctctccctctcCCCTCAACTCTCTCTCCCTACACACATCTTAAGAGACCTCAGCAGTGTAAGATAAGTTTAGCTACTCCA i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711458 81 + 64156825 TCTCTCCCTCTCCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCCGCAGTGTAAGATAAGTTTAACTCCCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868909 81 + 59248254 tctctccctctcCCCCCAACTTTCTCTTCCTACACACATCTTGAGAGACCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958305 81 + 51301725 tctctccctctccccccaactttctctccctACACACATCTTGAGAGGCCTCAGCAGCGTAAGGTAAGTTTAACTCCccca i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47658670 81 + 50890351 tctctccctctcCCCCCAACTTTCTCTTCCTACACACGTCTTGAGAGGCCTCAGCAGTGTAAGATAAGTTTAACTCCCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 66678 81 + 138250 tctctccctctcCCCCCAACTCTCTCTCCCTACACCCATCTTGAGAGCCCTTAGCAGTGTAAGATGAGTTTAGCTACCCCA i calJac3.chr22_GL285922_random T 342 I 1902 e canFam3.chr1 20143099 1683 - 122678785 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=647320.000000 s hg38.chr19_GL949753v2_alt 780413 536 + 796479 Cggcctggcacggtagctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagattaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcgcctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctgggaggcggaagttgcagtgagccgagacca-cacctctgcactccagcctgggtgacagagtgagattctgtctcaaaaaaa---gaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcatgcagatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctatt-aaaaatacaaaaaaattagccaggcacggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgaga s ponAbe2.chr19 56934449 538 + 60714840 Cggcccggcacggtggctcacgcctttaatcccagcactttgagaggccaaggcaggcagatcactggagatcaggggtttgaaaccagcctggccaacatggtgaaaccctgtctctactacaagtaccaaaaaattagctgggcatggtggcacgcacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgagcctaggagacagaggttgcagcgagccaagacca-cacctctgcactccagcctgggtgacacagtgagattctgtctcaaaaaaaaaagaaagaGGAggccgggcactgtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctact-aaaaatacaaaaaa-ttagccgggcatggtggcaggtgcctgtagttccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagcggaga i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60711539 526 + 64156825 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcagaagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55868990 526 + 59248254 Tggctgggcatggtggtgcacgcctgtaatcctaacactttgggaggccgaggcaggaggatcacttgagatcaggagtttgaaaccagcctggccaaca---tgaaaccctgtctctactacaattaccaaaaaattagct-ggcatagtggctcacacctgtagtactagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcg-catctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTCAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggctgaggcaggtggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctactaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaaccagggaggcggagcttgcagtgatctgaga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958386 528 + 51301725 tggctgggcatggtggggcacgcctgtaatcctaacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagccgggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagatcgccacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---gtcAGAGGaggctg------gtggctcacacctgtaatcccaggactttgggaggccgaggcaggtggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctattaaaaaatacaaaaaa-ttagccaggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggtgtgaacccgggaggcagagcttgccgtgagtCAAGa i papAnu2.chr19 C 0 I 72 s chlSab2.chr6 47658751 525 + 50890351 Tggctgggcatggtggtgcacgcctgtaatcctgacactttgggaggccgaggcaggcggatcacttgagatcaggagtttgaaaccagcctagccaaca---tgaaaccctgtctctactacaagtaccaaaaaattagcg-ggcatagtggctcacacctgtagtcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggagtcagaggttgcagtgagcagagattg-cacctctgcactccagcctgggcgacagagcgagattctgtctcagaaaaa---GTAAGAGGAGGCTg------gtggctcacacctgtaatcccaggactttgggaggccgagacaggtggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccctgtctctact-aaaaatacaaaaaa-ttagccaggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgatctgaga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e panTro4.chr19 59979834 1933 + 63644993 M a score=28076.000000 s hg38.chr19_GL949753v2_alt 780949 33 + 796479 tcgcgccactgcactccagcctgggcgacagag s ponAbe2.chr19 56934987 33 + 60714840 tcacaccactgcactccagcctgggcgacagag i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712065 33 + 64156825 tggtgccactgcactccagcctgggcaacagag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869516 33 + 59248254 tggtgccactgcactccagcctgggcaacagag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47659276 33 + 50890351 tggtgccactgcactccagcctgggcaacagag i chlSab2.chr6 C 0 I 383 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=3987.000000 s hg38.chr19_GL949753v2_alt 780982 12 + 796479 caagactctgtc s ponAbe2.chr19 56935020 12 + 60714840 caagactctgtc i ponAbe2.chr19 C 0 C 0 s rheMac3.chr19 60712098 12 + 64156825 agaaatcctgtc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55869549 12 + 59248254 agaaatcctgtc i macFas5.chr19 C 0 I 638 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e nomLeu3.chr10 103401898 2007 - 106955855 M e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=6111.000000 s hg38.chr19_GL949753v2_alt 780994 39 + 796479 aagaaagaaa-gaaaagaaaagaaaaaaagaaaAGAATAA- s ponAbe2.chr19 56935032 39 + 60714840 aagaaagaaaagaaaagaaaaaaagaaaagaaaagaa-aa- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403960 38 - 106955855 aagggaggga-gagaggaagggaagtaaggaagggag-gg- i nomLeu3.chr10 M 2007 C 0 s rheMac3.chr19 60712110 15 + 64156825 -----------------------tgaaaaaaaaagaa-a-- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870199 39 + 59248254 aaggaaggaa-ggaaggaaagaaagaaaaagaaagaa-aga i macFas5.chr19 I 638 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e papAnu2.chr19 47958914 72 + 51301725 I e panTro4.chr19 59979834 1933 + 63644993 M a score=9924.000000 s hg38.chr19_GL949753v2_alt 781033 28 + 796479 agggagggagggaagg--gaaaggaaggga s ponAbe2.chr19 56935071 21 + 60714840 agggagggagggaggg---------aggga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103403998 30 - 106955855 agggaggaagggaaggaaggaagggaggga i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55870238 20 + 59248254 agggtgggagggaggg---------aggg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47958986 21 + 51301725 agggagggaggaaggg--------aaggg- i papAnu2.chr19 I 72 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e chlSab2.chr6 47659309 383 + 50890351 I e rheMac3.chr19 60712125 0 + 64156825 C e panTro4.chr19 59979834 1933 + 63644993 M a score=50696.000000 s hg38.chr19_GL949753v2_alt 781061 74 + 796479 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggggaggggaggggaggggaag------ggaggga s ponAbe2.chr19 56935092 45 + 60714840 aggaa--aaggaagggaaggaaggaaggaagaaagaaagaaagaaag---------------------------------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404028 80 - 106955855 gggaggaagggaagt-aaggaagggagggagagaggaagggaggaagggagggagggaggaagggagggaggaaggaagga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712125 32 + 64156825 ----------------------------------------aaggaaggaaggaaggaaggaaggaagg---------agga i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870258 71 + 59248254 aggaaggaaggaagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg---------agga i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959007 74 + 51301725 agggagggagggagg-aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagcaaggaagg------agaagga i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659692 68 + 50890351 ----agggagggagg-gaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg--------aagga i chlSab2.chr6 I 383 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e calJac3.chr22_GL285922_random 66759 1902 + 138250 I e panTro4.chr19 59979834 1933 + 63644993 M a score=78437.000000 s hg38.chr19_GL949753v2_alt 781135 38 + 796479 agAAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA s ponAbe2.chr19 56935137 38 + 60714840 aaaAAGGCA--------------------GGCCCTGATGTTCAGGGAGCTGAGAGTGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404108 58 - 106955855 aggaaggcaggcaggcaggcaggcaggCCGGCCCTGATGTTCAGGGAGCTGAGAGTGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712157 38 + 64156825 aAGAAAGAA--------------------GACCCTGATGTTCAGGGAGCTGAGAGTGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870329 38 + 59248254 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959081 38 + 51301725 aacaaagaa--------------------gacCCTGATGTTCAGGGAGCTGAGAGTGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659760 38 + 50890351 aagaaagaa--------------------gACCCTGATGTTCAGGGAGCTGAGAGTGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68661 38 + 138250 AAAGAGGAA--------------------GACCCTGGGGTTCAGGGAGCGGAGAGTGA i calJac3.chr22_GL285922_random I 1902 C 0 e canFam3.chr1 20143099 1683 - 122678785 I e panTro4.chr19 59979834 1933 + 63644993 M a score=340370.000000 s hg38.chr19_GL949753v2_alt 781173 161 + 796479 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CGCCCCGACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCACCCCGCCACGATCCCTCCCA s ponAbe2.chr19 56935175 161 + 60714840 AGTCACCAGCTCCAACCCAGGATCCAAATTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCAC--CCCC--------CACCCCAACCCA-------------------------TCCCCCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404166 163 - 106955855 AGTCACCGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCACCACCCC--------CGCCCCGACCCA-------------------------TCCCTCAGAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCTGCACAAACCGCCCCGCCACGATCCCTCCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712195 151 + 64156825 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAC----------------------------------GGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870367 160 + 59248254 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCGTCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959119 160 + 51301725 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTGTC-CCCATCACCA---CCCG--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCACGATCCCTCCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659798 160 + 50890351 AATCACTGGCTCCAACCCAGGATCCAAACTCAAGTCTGTCTGGGGTCCTATC-CCCGTCACCA---CCTC--------CTCCCCGACCCA-------------------------TCCACCACAGACCTGGGAAGGAGCCAGGCTCCTCCGGTTTCAGGAAAGGGCGGCACAAACCGCCCCTCCATGATCCCTCCCA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68699 157 + 138250 CGTCACTGGCTCCAACCCAGGATGCAAAGTCAAGTCTGTCTGGGGTCCTGGC-CCCATCACCA---CTC-----------CCTTGACCCA-------------------------GCCCCCACAGACCTGGGAAGGAGCCAGGCTCCTCCAGTTTCAGGACGGGGCTGCCCAAACCGCCCTGCCAGGATCCCTCCCA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144782 156 - 122678785 agtcacctgGTCTGACCCAAGACCTAAACTCCAGTC--TCTGAGTCCCTTCCACTCGCTGCCC---CCCCCCTCCGGGCCCCCAGGCCCA-------------------------GCCCCCTCCCACCAGCCCTAGGGCCAGTCTCCCCCAGTTTCAGGAAATTG--------ACCCACCCTCC---ATCTCTCCCA i canFam3.chr1 I 1683 C 0 e panTro4.chr19 59979834 1933 + 63644993 M a score=2716755.000000 s hg38.chr19_GL949753v2_alt 781334 882 + 796479 GAGAACAAACAG-------------CTCCCGGCCACCGGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCTGGTTCCCAGACCCACCCTCCCTGTGTCATAAGCGCCTCTCCCCGCACTCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACCGCCGATGAGACCTCCCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTAGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctctgcattcctggctcattctcgaaattgaggtcaaagctcagatgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcacgccgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag s panTro4.chr19 59981806 881 + 63644993 GAGAACAAA-AG-------------CTCCCGGCCGCCGGCTTTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGGTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCAGGTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCGTCGTACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCTAGACACTCAGGGATGGG-----CCAGCCCATTAGAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGtctcacacctcacttcctccggccagccacacccctgcagatttaacccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaatctcagatgctgcctcctt-----------ccctgaccaccctccctgaagcagccgcacctgcctgctcctagtgactctgttccttcacc----tgtttcgtttcctccacagggtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacctactaagatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i panTro4.chr19 M 1933 C 0 s ponAbe2.chr19 56935336 879 + 60714840 GAGAACAAACAG-------------CTCCTGGCCGCC-GCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGTTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACTCCTTTCAGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCTCTCATCGCACACTTAGAGCTGCC---TGTTTTCCTTCCTTCCTTAAGCGAGCTGGGAACTCTAGACACTCAGGCTTGGG-----CCAGCCCATTAGAGTAAGTATTCGGCCACC-TCTTGACCGCTAAGGTCACTGCTGCTGTCACCATCAACAT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGAATTCACCCGCCAGCCTCCCTGAGg--tttcccctgcctgaaatcctctccacattcctggctcattctcgaaattgaggtcaaagctcagatgccacctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctgctcctagtcactcagttccttcacc----tgtttcgtttcctccacagcatttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccatcacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacactcccaatgcttagaatgtcaatctttgcttcattatccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103404329 882 - 106955855 GAGAACAAACAG-------------CTCCTGGCCGCCAGCAGTCT--C---------------CCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTTCGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGACTGTTC---TCAGAGGAATGCCCAGGAAAAACCTACCCGAACCCCTTTCAGCTGGGAAGGGGACCCACCTGGGCTTCCT---CACTGCCGATGAGACCTCCCCCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTCCTTAAGCGGGCTGGGAACTCCAGACACTCAGGCTTCGG-----CCAGCCCATTACAGTAAGCATTCGGCCACC-TCTCGGCTGCTACGGTCACTGCTGCTGTCACCATCAACGT-------GACTGTCTCACACCTCACTTCCTCCGGCCAGCCACACCCCTGCAGATTTAACCCGCTAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcgttcctggctcattctcgaaattgaggtcaaagctcagacgccgcctcctt-----------ccctgaccaccctacctgaagcagccgcacctgcctgctcctagtcactccgttccttcacc----tgtttcgtttcctccacagcgtttaccacaatctgaaagtcttattcatgcaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatctcacaagggctggggtttcatctttctcctccc-cctctgtatctccagcacatgaaacatgcttggcacactgtaggtgcttaagtatttgctactacatcactttgggattttgcataggacagtcccaatgcttagaatgtcaatctttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60712346 844 + 64156825 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCTGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCATCTCACACCTCACGTCCTCCGgccagccacactcctgcacatttaagccgccagcctccctaagg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcag-----------------------------cccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgtctcctcct-cctctgtgtctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactacgtcactttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55870527 870 + 59248254 GAGAGCAAACAG-------------CTCCCGGCCGCCGCAGGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAATCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCGATGAGACCTCCCTCATCGCACGCTTAGAGCTGCC-TGCATTTTCCTTCCTTCCTCAAGCGGGCTGGGAAGTCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAAGCCGCCAGCCTCCCTAAGg--tttcctctgcctgaaatcctctccgcattcctggctcattctcgaaattgaggtcaaa--------accgcctcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactccgtcccttcacctc--tgtttcgtttcctctacagcgtttactacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaagggctggggtttcatctgt---ctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctACTACGTCActttgggattttgcataggacactcccagtgcttagaatctcaattgttgcttcattgtccttggcaaactcctattcatcctttaaaaccccatccatttatcccttaaccaa i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47959279 875 + 51301725 GAGAGCAAACAG-------------CTCCCGGCCGCCGCCagtct--c---------------cctcctcttcctg---ccaGGCCGGTTCCCAGACCCACCCTCCCTGTGCCATAAGCGCCTCTCCCCGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACGCCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACTGCCAATGAGACCTCCCTCATCGCACGCTTAGAGCTGCc-tatgttttccttccttcctcaagcGGGCTGGGAAGTCTAGGGACTCAGGCTTGGG-----CCAGCCCATTAGCTTAAGCATTCAGCCACCGTCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACGCCCCTGCACATTTAAGCCGCCAGCCTCCCTAAgg--tttcctctgcctgaaatcCTCTCTGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGcctcctt-----------ccctgaccaccctatcTGAAGCAGCCGCACCTGCCTACTCGTAGTCACTCCGTCCCTTCACCTC--TGTTTCGTTTCCTCTACAGCGTTTACTACAATCTGAAAGTCTTATTCACATAGGTGTCTACTTGTTTATCT------CCCCAccacacccactaggatgacaATATCACAAGGGCTGGGGTTTCATCTGTCTCCTCCTACCTCTGTATCTCCAGCACATAAAACATGCTTGGCACACTGTAGGTGCTTAAGTATTTGCTACTACGTCACTTTGGGATTTTGCATAGGACACTCCCAGTGCTTAGAATGTCAATTGTTGCTTCATTGTCCTTggcaaactcctattcatcctttaaaACCCCATCCATTTATCCCTTAACCAA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47659958 859 + 50890351 GAGAGCAAACAG-------------CT-CCGGCCGCCGCAAGTCT--C---------------CCTCCTCTTCCTG---CCAGGCCGGTTCCCGGACCCACCCTCCCTGTACCACAAGTGCCTCTCCCTGCACCCTCACCAGGGCTGGCTGGTC---TCAGAGGAACACCCAGGAAAAACCTACCCGAACCCCTTTCCGCTGGGAAGGGGACCCGCCTGGGCTTCCT---CACAGTTGATGAGACGTCCCTCATCGCACACTTAGAGCTGCC-TGTGTTTTCCTTCCTTTCCT---------------TCTAGAGACTCAGGCTTGGG-----CCAGCCCATTAGCGTAAGCA-TCAGCCACCATCTCAGCTGCTACGGTCA---CTGCTGTCACCATCAACGT-------GACCGTCTCACACCTCACGTCCTCCGGCCAGCCACACCCCTGCACATTTAACCCGCCAGCCTCCCTAAGG--TTTCCTCTGCCTGAAATCCTCTCCGCATTCCTGGCTCATTCTCGAAATTGAGGTCAAA--------ACCGCCTcctt-----------ccctgaccaccctatctgaagcagccgcacctgcctactcgtagtcactctgtcccttcacctctgtgtttcgtttcctctacagcgtttaccacaatctgaaagtcttattcacgtaggtgtctacttgtttatct------ccccaccacacccactaggatgacaatatcacaggggctggggtttcatctgtctcctcct-cctctgtatctccagcacataaaacatgcttggcacactgtaggtgcttaagtatttgctactatgtcactttgggattttgcataggacactcccaatgcttagaatgtcaattgttgcttcattgtccttggcaaactcctattcatcctttgaaaccccatccatttatcccttaaccag i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 68856 844 + 138250 GAGAACAAACAG-------------CTCCCGCCCGGCGACAGCCT--CCCTCCTCCACCGCCTCCTCCTCCTCCTG---CCAGGCCGGTTCCCAGACCCACCCTC---------------CCTCTCCCCGCACCCTCGCCAGGGCTGGCTGGTC---TCAGAGGAACGCCTAGGAAAAACCCACCCAAACCCCTTTCAGTTAGGAAGGGGACACACCTGGGCTTCCTGAACGCTGCCGATGAGACCTCTCTCATCGCA--GTTAGAGCTGCC---------------------AGACAATCTGGGAACCCTAGAAACTGAGGCTTGGG-----CCAGCCCATTAGAGTCAGCACTCAGCCACCCTTCCGGCTGCTGCCGCCA---GTGCTGTCACCATCAGCGT-------GACTGTCACACACCTCACTTCCTGCGGCCAGCCGCACCCCTGCAGATTTAACCCGCCAGCCTCCCCAAGg--tctccttcgcctgaaatcctctccgcattcctggc---ttctcaaaattcaggtcaaagctcagatgccacctcctc-----------ccctgaccaccctccctgaagtggctgcacctgcctgctcctagtcactccatcccttcacctc--tgttctgtttcctccacagcgtttaccacagtctgaaagtcttattcatgtaggtgtctacct-tttatct-------cccaccacacccagtaggatgacagtatcacaaaggctggggtttcatctgtctcctcct-cctct--------------taaaacatgcttggcgtgtggtaggtgcttaagtatttgctACTACGTCActttgggattttgaatagaacactcccaatgcttagaatgtcaatctttgcttcactgtccttggcaaactcctattcatcctatgaaaccccatcaatttatcccttaatcag i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20144938 829 - 122678785 GAGAACAAACAGCCTCGCTCTCAACCTCCCTACCCACCCCCTTCTGCC---------------CCTCCCCCGCCAGGCACCTGGCGGGTTCTCAGACCCACCCTCCTTGGGTCACA-------------GTGCCTGCTCTGGGGCAGGCAGGCCCATCCCCAGATCTGCACGGAAACACCTCACCCA---CCCTTCC------------------TCTGGGCTTCCC---CACAGCC---------------------CATTCAGGGCAGCCTTGAGTTTGTGACACCTCCCCAGCC----------------AGACTCAGGCTCAGGATGACCCCATCCACCCACGCTGGAGTTTGGCCACCCTCTTGTTTGCTATTGCCA---TAGTTGTCACCGTGACAGTCCTGGTAGCCAGTCTCCAGCCTGACATGCTCTGGccagacacaaccctacaggcctcacctgccagcctccccaaggtattccttctgcccagaaccctctctgcattcctgactcattcttgaaattcaggtcaaagctcagatgccacctcctcactgaggccagccctgacta-cctctctgaagtgactatacctgcttgccctcagtagccccatctcttcacctt--ggttttatgtcctccatggc----accac-------aagtcttcctcatggatgtgcttaccagtttaccttctgtctcccaccacacccgccagggcaacaataacacaagggcagggcttttgtctgtccagtgct-c-------------------agaacgtgcttggaacaaagtcgg----cATGTATTTGCTACTATGtgactttgggactttgcaaatgctactatcaatgcttagactgtcatcccttgctgcattgtccttgggaaactcctatttatccttcagaaccctctccagttatcacTCAACTGG i canFam3.chr1 C 0 I 483 a score=544796.000000 s hg38.chr19_GL949753v2_alt 782216 180 + 796479 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTattgaataaataaat s panTro4.chr19 59982687 180 + 63644993 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTACGGCACACATTTTGTCTCAGGAGCTACGTATTGAATAAATAAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936215 180 + 60714840 gaaaggcttctgtgcctcatacaaccacccataaagctggattagggctttctctggggacac-ccttgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAACTACGTATTGAATAAATAAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405211 180 - 106955855 gaaaggcttctgtgcctcatacaaccaccgataaagctggattagggctttctctggggacac-ccctgccctgtgccacacttccattagcgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAGGCACACATTTTGTCTCAGGAAATACGTATTGAATAAATAAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713190 180 + 64156825 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55871397 180 + 59248254 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacac-acatgccctgtgacacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTattgaatgaatgaat i macFas5.chr19 C 0 I 312 s papAnu2.chr19 47960154 180 + 51301725 GAAAGGCTTCTGTGTCTCATACATCCACCCATAAAGCTGGATTAGGGCTTTCTCTGGGGACAC-ACATGCCCTGTGACACACTTCCATTAGTGCACATATCCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTAcgtattgaatgaattaat i papAnu2.chr19 C 0 I 306 s chlSab2.chr6 47660817 180 + 50890351 gaaaggcttctgtgtctcatacaaccacccataaagctggattagggctttctctggggacat-acatgccctgtgccacacttccattagtgcacatatcCCCCATGA------ATTGTGCACACCAGCAGGGTCTAGAGTAAAGCACACATTTTGTCTCAGGAACTACGTATTGAATGAATGAAT i chlSab2.chr6 C 0 I 306 s calJac3.chr22_GL285922_random 69700 186 + 138250 aaaaggctcctgtgcctcatactatcaaccataaagccagattagggctttctctggggatacaccttgccctgaaccacacttccattagtgtacatat-ctccatgaattatgattgtGCACACCAGCAGGGTCTAGAGTGAGGTACCAATTTTGTGTCAGGAACTATGTATTGAATGAATAAAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=31004.000000 s hg38.chr19_GL949753v2_alt 782396 14 + 796479 taattacttttttt----------- s panTro4.chr19 59982867 13 + 63644993 TA-TTACttttttt----------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936395 14 + 60714840 TAACTACttttttt----------- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405391 14 - 106955855 TAACTACttttttt----------- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713370 14 + 64156825 TAATTACTTTTTTT----------- i rheMac3.chr19 C 0 I 343 s macFas5.chr19 55871889 14 + 59248254 TAATTACttttttt----------- i macFas5.chr19 I 312 C 0 s papAnu2.chr19 47960640 14 + 51301725 taattacttttttt----------- i papAnu2.chr19 I 306 C 0 s chlSab2.chr6 47661303 14 + 50890351 TAATTACttttttt----------- i chlSab2.chr6 I 306 C 0 s calJac3.chr22_GL285922_random 69886 21 + 138250 ----TACtttttttttttttttttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=88516.000000 s hg38.chr19_GL949753v2_alt 782410 35 + 796479 gagacaaggtcttgctctgtcacccaggctggagt s panTro4.chr19 59982880 35 + 63644993 gagacaaggtcttgctctgtcacccaggctggagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936409 35 + 60714840 gagacaaggtcttgctctgtcaccctggctggagt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405405 35 - 106955855 gagacaaggtcttgctctgtcacccaggctggagt i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55871903 35 + 59248254 gagacaaggtcttgctctgtcgcccaggctggagt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960654 35 + 51301725 gagacaaggtcttgctctgtcgcccaggctggagt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661317 35 + 50890351 gagacaaggtcttgctctgtcacccaggctggagt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69907 35 + 138250 gaaacaagatcttactctgtcacccaggctggagt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I e rheMac3.chr19 60713384 343 + 64156825 I a score=787462.000000 s hg38.chr19_GL949753v2_alt 782445 262 + 796479 gcagtggtgcaatcgtggctcactgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttttaattttttttttggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctctgcttcccaaagtactgggactataggtgtgagacgccacactcagcctcattatttaat s panTro4.chr19 59982915 261 + 63644993 gcagtggtgcaatcgtggcttattgta-ccttgacctcccaggttcaagcaatcctcccacctcagcctcccaagcagctaggaccacagatgcaggccactatgcctggctaatttaaaattttttttt-ggtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacactcagccTCATTGTTTAAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936444 262 + 60714840 gcagtgatgcaatcgtggctcactgtagccttgacctcccaggatcaagcgatcctcccacctcagcctcccaagcagctaggatcacaaatgcatgccactatgcctggctaatttttaaatttttttt-tgtagggatggaatctccctatgttgcccaagctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtactgggcctataggtgtaagacaccacattcagccTCATTATTTAAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405440 261 - 106955855 gcagtggtgcaatcatagctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagctaggaccacaaatgcatgccactatgcctggctaatttttaaatttttttt--gtagggatggaatctccctatgttgcccaggctggtttcaaactcctaggctctagggatcctcctgcctccgcttcccaaagtactgggactataggtgtgagacaccacagtcagccTCATTATTGAAT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713727 261 + 64156825 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i rheMac3.chr19 I 343 C 0 s macFas5.chr19 55871938 261 + 59248254 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactgtgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgcctcattatttaat i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960689 261 + 51301725 gcagtggtgcaatcatggctcactgtagccttgaattcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactacacctggctaattttaaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacaTCACACTCTGCGTCATTATTTAAT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661352 261 + 50890351 gcagtggtgcaatcatggctcactgtagccttgacttcccaggctcaagcaatcctcccacctcagcctcccaagcagttaggaccacaagtgcatgccactatgcctggctaatttttaaattattttt--gtagggatggaatcttcctatgttgcccaggctggtttcaaactcctaggctcaagggatcctcctgcctccgcttcccaaagtaccgggactataggtgtgagacatcacactctgccTCATTATTTAAT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 69942 261 + 138250 gcagtggtgcaatcacagctcactgcagccttgccctcccaggctcaagcaatcctcccacctcagtctcccaagtagctagaaccacaagtgcgtgccactatgcctggctaatttttagatttcttaa--gtagagatggaatctccctatgctgcccaggctggtttcaaactcctaggctcaagtgatcctcctgccttagcttcccaaagtactgggactataggtgtgagccaccacactcagccTAATTATTTCAT i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20145767 483 - 122678785 I a score=370754.000000 s hg38.chr19_GL949753v2_alt 782707 108 + 796479 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCC-ATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC s panTro4.chr19 59983176 109 + 63644993 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCTTCAGCTCCCATTGCCAGGGAATCTGACCTTTCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936706 109 + 60714840 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCACCTTCTCAAGAACATGCCTCAGCTCCCATTGCCGGGGAATCTGACCTTTCATC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405701 109 - 106955855 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCTCCTTCTCAAGAACATGCCTCAGCTCCCGTTGCCAGGGAACCCGACCTTTCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60713988 109 + 64156825 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTACAACCTTCCCCCTTCTCAAGAGCATGCCTCAGCTCCCATTGGCAGAGAATCTGACCTTTCTCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55872199 109 + 59248254 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47960950 109 + 51301725 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTAATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCATTGGCAGGGAATCTGACCTTTCTCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661613 109 + 50890351 ATGTAAGTAGCTATATCTCTCTGAGACCCAGCCCCCATCTGATTTATAACCTCCCCCCTTCTCAAGAACATGCCTCAGCTCCCACTGGCAGGGAATCTGACCTTTCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70203 109 + 138250 ATGTAAGTAGCTTTATCGCTCTGAGACCCAGTCCCCATCTAATTTATAACCTCCCCGCTTCTCAAGAACGTGCTTTAGCTCCCATTGTCAGGGTATCTGACCTTTCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146250 101 - 122678785 ATGTAAATAAGTATATCTTCCTGAGACCCAGCTCCCACCTTATTTATATCTGCCCCCC--------AAACTGCCATATCTCCTATTTCCTGTGCCTGTGACTGTCCACC i canFam3.chr1 I 483 I 9 a score=391103.000000 s hg38.chr19_GL949753v2_alt 782815 134 + 796479 TTGTC-ATAGGAt------tttttttttttttt----gagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta s panTro4.chr19 59983285 138 + 63644993 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcgcccagcctggagtgca-tggcacaat---ggctcgctgcaacctctgcctcccgggttcaagtgattctcctgcctcagtctccctagta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936815 138 + 60714840 TTGTC-ATAGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcccgggttcaagcaattctcctgcctcagtctccctagta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405810 138 - 106955855 TTGTC-ACGGGAt------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcgcaat---ggctcgctgcaacctctgcctcctgggttcaagcaattctcctgcctcagtctccctagta i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60714097 138 + 64156825 TTGTC-ATAGGAA------ttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtctccctagta i rheMac3.chr19 C 0 I 427 s macFas5.chr19 55872308 136 + 59248254 TTGTC-ATAGGAA--------ttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaccctctgcctcccaggttcaagcgattctcctgcctcagtcgccctagta i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961059 144 + 51301725 TTgtc-ataggaattttttttttttttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcgctgcaacctctgcttcccaggttcaagtgattctcctgcctcagtctccctagta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661722 133 + 50890351 TTGTC-ATAGGAA-----------tttttttttttttgagtcagaatctcagtcagtcacccagcctggagtgca-tggcacgat---gactcactgcaccctctgcctcccaggttcaagtgattctcctgcctcagtctccctagta i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70312 141 + 138250 TTGTCGATAGGAA--------ttttttttttttttttgaaacagaatctcactcagtcacccagcctggagtgcagtggcatgatctcggctcactgaaacctctgcctcctggtttcaggcaattctcctgcctcagctttcctagta i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I a score=332129.000000 s hg38.chr19_GL949753v2_alt 782949 146 + 796479 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacatccgg s panTro4.chr19 59983423 146 + 63644993 gctgggactacaa--gcgcacgccaccacacccagctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggtgtgaggcaccacacccgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56936953 146 + 60714840 gctgggactacaa--gtgcacgccaccactcccgtctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgtgaggcaaaacacccgg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103405948 146 - 106955855 gctgggactacaa--gtgcacgccaccacacccggctacttttgtagagatggggtttcaccatgttggctaagctggtctcgaactccagatctcaagtgat-----------ggcctcccaaaatgctgggtaacaggcgtgaggcaccacacgcgg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872444 148 + 59248254 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagcatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcgaggcaccgcacccgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47961203 148 + 51301725 gctgggactacaagtgcgcacgccaccacacccggctacttttgtagagatagaatttcaccgtgttggctaagctggtcttgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagCAGGTGCgaggcaccgcacctgg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47661855 146 + 50890351 gctgggactacaa--gcgcacgccaccacacccggctacttttgcagagatagcgtttcaccgtgttggctaagctggtctcgaattcctgatctcaagtgat-----------ggcctcccaaaatgctgggtagcaggtgcaaggcaccgcacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 70453 157 + 138250 gctgggactacag--gcgcacatcaccacacctggatacttttgtagagacagggtttcaccatgttggccaggctggtcttgaactcctgatctcaagtgatccacccacctgaacctcccaaaatgctgggtaacaggcatgagccactgcacccag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20146351 9 - 122678785 I e rheMac3.chr19 60714235 427 + 64156825 I a score=447029.000000 s hg38.chr19_GL949753v2_alt 783095 200 + 796479 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA s panTro4.chr19 59983569 200 + 63644993 cTGTCATAGGAATTTGTCAGCAAATCCTACAGACTAGAGGATGTGTGTTGGGTGGTG----TGGGGGTGGGGATAACGGAGGAGATGGGG------------------------GG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGAAAGAAAGGCCAG-CCCCCCAAGAC--AGCTATCCTAGACTGGG-ACAGAGGCAA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937099 202 + 60714840 ctGTCATAGGAATTTGTCAGCAAATTCTACAGACTAGAGGATGTGTGTTGGGTGGTA----TGGGGGTGGGGATAACGGAGGAGATGGGG-----------------------AGG---TG----AGCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCGTTCCTGGGACATCCCAGGTGAGAGGGAAGAAAGGCCAACCCCCCCAAGAC--AGCTATCCCAGACTGGG-ACAGAGGCAA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406094 200 - 106955855 cTGTCATAGGCATTTGTCAGCAAATCCTACAGACTAGAGGGCGTGTGTTGCATGGTG----TGGGGGTGGGGATAACGGAGGAGATGGG-------------------------GG---TG----ACCTCTTCAAGCCCCAGGGGAGAATTCTGTTCCATTCCTGGGACATCCCAGGTGAGAGGGAAGAAAAGCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAG i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55872592 205 + 59248254 cTGTCATAGGAATTTGTCAGCGAGTCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i macFas5.chr19 C 0 I 477 s papAnu2.chr19 47961351 205 + 51301725 ctgtcATAGGAATTTGTCAGCAAATCCTACAGACTGGAGGTTACGCGTGGGGTGGTG----TAGGGGTGGGGATAACggaggagatggggg--------------------agggg---tg----aACTCTTCAAGCCCCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGTAGAAAGTCCAG-CCCCCCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i papAnu2.chr19 C 0 I 479 s chlSab2.chr6 47662001 205 + 50890351 cTGTCATAGGAATTTGTCAACAAATCCTACAGACTGGAGGTTACGTGTGGGGTGGTG----TAGGGGTGGGGATAACGGAGGAGATGGGGG--------------------AGGGG---TG----AACTCTTCAAGCCTCAGGGGAGAAGTCTGTTCCATTCCTGGGACATCCTAGGTGACAGGGAAGAAAGTCCAG-CCCCTCAAGAC--AGCTATCCCAGACTGGGCATAGAGGCAA i chlSab2.chr6 C 0 I 478 s calJac3.chr22_GL285922_random 70610 223 + 138250 cTGTCATATGAATTTATTAGCAAATCCTACGGACTGGAGGATATGTGTTGG--GGT-------GGGGTGGGGATAAGAGAAGAGATGGGAATGGTTTCAAACATGACACTCGGGGG---AGTCTCAGCTCTTCAAGCCCCAGTGGGGAATTCTGTTCCATTTCGGGGACCTCCTAGGTGAGAGGAAAGAAAGTCCAG--CCCCCATGAC--AGCTATCCCAGACTGGGCATAAAGGCAA i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20146360 231 - 122678785 CCATCCTAGGAATTCATCAGCAAACCCTACA-ACTGGGGAGT-CGGGCTGAGCTGTGTGTTTGGCAAGGAGGAGAAGGAAAGAGGTGGGG-TGCTTTTAGAGATGATATATGGGGAATCTG----AGCTGATCAGGCTCCAGTGGGGAATTGTGTGTGCTGCTGGGGCTCCTCCAACCCAGAGAATAAACAATCCAA-TCGCCAATGACAAAGCTATCCGAGTTTTGGGACAGAAGCAG i canFam3.chr1 I 9 C 0 e rheMac3.chr19 60714235 427 + 64156825 I a score=1198817.000000 s hg38.chr19_GL949753v2_alt 783295 365 + 796479 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGGACTTGGGTGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT s panTro4.chr19 59983769 358 + 63644993 ACCCTGA-CCACAGAGCTCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGG-AGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGACTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGCGGCCACAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937301 358 + 60714840 ACCCTGA-CCACAGAGCCCTGTCACTCACCCAAGAACAGGTGCCAATGGCAGAACAGCCAGGCTGAGGGGGG-AGAGAGGCGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAAGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCGGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----TCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103406294 355 - 106955855 ACCCTGA-CCACAGAGCCCTGTCATTCACCCAAGAACAGGTACCAATGACAGAATAGCCAGGCAGAGGGGGG-AGAGAGGGGCTTCGGTGATGGATTTCCCTGGTGACTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGTATTTGCTGTGGGTTACAGGGAAGGAGGGGCCTCCTTTGCGGCCAGAGA---AGGAAAGAGGCCCTGGGCCCTGGGACTTGGG-------TGGAGGCTCCGGTTTCGG--------TCTCACCTGCTGCTCCAGACCATGG----CCTGGAAG-GCCGCCTGCGCCACC---CCCAAAGCAATGAGAT i nomLeu3.chr10 C 0 I 357 s rheMac3.chr19 60714662 359 + 64156825 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGCAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCTGCCTGCGccacc---cccaaagcaaggagat i rheMac3.chr19 I 427 I 6 s macFas5.chr19 55873274 359 + 59248254 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGCTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTCGCTGATGGATTTCCCTGGTGCGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACTCTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAAGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCACGG----CCTGGAGG-GCTGCCTGCGCCACC---CCCAAAGAAAGGAGAT i macFas5.chr19 I 477 I 446 s papAnu2.chr19 47962035 359 + 51301725 ACCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAATGACAGAATAGCCAGGCCGAGGGGGGAAGAGAGGTGCTTTGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACTGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAGGGAGGGGCCTGCTTTGcggccagagaaggaggaaagaggccCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAGAT i papAnu2.chr19 I 479 I 6 s chlSab2.chr6 47662684 359 + 50890351 aCCCTGA-CCACAGGGCCCTGTCACTCACCCAAGAACAGGTGCCAGTGACAGAATAGCCAGGCCAAGGGGGGAAGAGAGGTGCTTCGGTGATGGATTTCCCTGGTGAGTTGCCAAGACAGGGCTTTACTGCCTCCGCCCTGGACTGGCTGAGTCAGACCGTGCAGGGGTGGACACTTTGACTGGTATTTGGGAGGCATTTGCTGTGGGTTACAGAGAAGGAGGGGCCTGCTTTGCGGCCAGAGAAGGAGGAAAGAGGCCCTGGGCCCTGGGACTAGGG-------TGGAGGCTCGGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGA----CCTGGAGG-GCCGCCTGCGCCACC---CCCAAAGCAAGGAAAT i chlSab2.chr6 I 478 I 6 s calJac3.chr22_GL285922_random 70833 339 + 138250 ACCCTGA-ACACAGAGCCCTGTCACTCACCCAGGAACAGGAGCT-GTGACAGAATAGCCAGGC----GGGGG----GAAGTTCCTCAGTGATGGGTCTCCCTGGTGAGTTGCCAAGATAGGGCTTCGCTGCCTCCGCCCTGGACCGGCTGAGTCACACCGTGCAGGGGTGGACACTGTGC----TATTTGGGAACCATGTGCTGTGGGTTACAGAGAGGGAGGGGCCTCCTTTGTGGCCAGAGAAGGAGGAAAGA-------GGCCCTGGGACTAGGG-------TGTAGGCTCCGGTTTCGG--------TCTTACCTGCTGCTCCAGACCATGG----CCTGGAGG-GCCGCCTACAccacc---cccaaagcaaggaaat i calJac3.chr22_GL285922_random C 0 I 6 s canFam3.chr1 20146591 366 - 122678785 ACTCAGACCCACAGAGTCCTAAAGCTCACTTAATGAAAGG---CACTGACTATGTTGGCAGACAAGGGGTTG-AAAAGGATTCTCAGGTGGCTGGTTGCCCTGGTGAGTCTCCAAGACCAGGGTTCACTGCCTCCACCCGGGATGTACTGAGTCACGCTGTACAGGGGTGGGAGCCTCCACTGGTATTTGGGAGCCACTTGCTATGGTTTGAAGAAAGGGA-GGGCCTCCTTTGTGGCCAGAGAAGGAGGAAGGAGGCCGTGGG-CCTAGAACTAGGG-------CGGAGGCTCTGGTTTCGATCTCACCTTCTCACCTGCTGCTTCAGACCTCAGAGCACCTGAAGGCAGGGACTAGGGCACCTGTCCCTGGGCCCTG---- i canFam3.chr1 C 0 C 0 a score=178018.000000 s hg38.chr19_GL949753v2_alt 783660 77 + 796479 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaagagtccag-------------------------------------------------------------------------------------------a-ccccagcc s panTro4.chr19 59984127 151 + 63644993 agcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccaggagtccaggcccccagcccctcctccctcagacc-----------------cagaagtccaggcccccagcccctcctccctcagacccaagagtcgaga-ccccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937659 150 + 60714840 agcccctcctccctcagacccagaag-tccaggccc-caagcccctcctccctcagacccagaagtccaggccccagcccctcctccctcagacccaggagtccaggccccaa-------------------------------------------------------------gcccctcctccctcagacccaagagtccaga-caccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407006 78 - 106955855 agctcctcctccctcagacccaggag-tccaggtcc-ccagctcctcctccctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gc-ccccagcc i nomLeu3.chr10 I 357 C 0 s rheMac3.chr19 60715027 150 + 64156825 tgcccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagaagtccagatccccagcccctcctccctcagacccagaagtccaggtccca------------------gcccctcctccctcagacccagaagtccagg-tcccagcc i rheMac3.chr19 I 6 C 0 s macFas5.chr19 55874079 76 + 59248254 agtccctcctccctcagacccagaag-tccagg-cc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i macFas5.chr19 I 446 C 0 s papAnu2.chr19 47962400 79 + 51301725 tgtccctcctccctcagacccaggag-tccaggccc-ccagcccctcctccctca-------------------------------------------gacccagggat------------------------------------------------------------------------------------------tccaggcccccagcc i papAnu2.chr19 I 6 C 0 s chlSab2.chr6 47663049 77 + 50890351 Tgcccctcctccctcagacccaggag-tccagaccc-ccagcccctcctccctca-------------------------------------------gacccaggagt-------------------------------------------------------------------------------------------ccagg-tcccagcc i chlSab2.chr6 I 6 I 235 s calJac3.chr22_GL285922_random 71178 78 + 138250 agcccctcctcccttagacccaggag-tccagggcc-ccagcccctgcttcctca-------------------------------------------gacccaggagtccag------------------------------------------------------------------------------------------gg-ccccagcc i calJac3.chr22_GL285922_random I 6 C 0 s canFam3.chr1 20146957 77 - 122678785 ---CCCTCCTCCCTCAGACTCTGCAGATCCTGGTCCACCAGCACCTCCTCCCTCA-------------------------------------------GACCCTGGAGTCCTG------------------------------------------------------------------------------------------GC-CCCCAGCA i canFam3.chr1 C 0 C 0 a score=76335.000000 s hg38.chr19_GL949753v2_alt 783737 19 + 796479 cctcctccctcagacccaa s panTro4.chr19 59984278 19 + 63644993 cctcctccctcagacccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937809 19 + 60714840 cctcctccctcagacccaa i ponAbe2.chr19 C 0 I 1 s nomLeu3.chr10 103407084 19 - 106955855 cctcctccctcagacccaa i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60715177 19 + 64156825 cctcctccctcagacccaa i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55874155 19 + 59248254 cctcctccctcagacccaa i macFas5.chr19 C 0 I 1 s papAnu2.chr19 47962479 19 + 51301725 cctcctccctcagacccag i papAnu2.chr19 C 0 I 1 s chlSab2.chr6 47663361 19 + 50890351 cctcctccctcagacccag i chlSab2.chr6 I 235 I 1 s calJac3.chr22_GL285922_random 71256 19 + 138250 cctcctccctcagactcag i calJac3.chr22_GL285922_random C 0 I 216 s canFam3.chr1 20147034 19 - 122678785 CCTCCTCCCTCAGACCTGG i canFam3.chr1 C 0 I 6 a score=29859.000000 s hg38.chr19_GL949753v2_alt 783756 13 + 796479 aggcctcggaccc s panTro4.chr19 59984297 13 + 63644993 aggcctcggaccc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937829 13 + 60714840 aggcctcggaccc i ponAbe2.chr19 I 1 C 0 s nomLeu3.chr10 103407104 13 - 106955855 aggccTTGGAACC i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60715197 13 + 64156825 AGGCCTCAGAACC i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55874175 13 + 59248254 aggcctcagaccc i macFas5.chr19 I 1 C 0 s papAnu2.chr19 47962499 11 + 51301725 agtc--cagaccc i papAnu2.chr19 I 1 M 905 s chlSab2.chr6 47663381 11 + 50890351 agtc--cagaccc i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 71491 13 + 138250 AGGCCTCGGACTC i calJac3.chr22_GL285922_random I 216 C 0 s canFam3.chr1 20147059 13 - 122678785 AGGTCCCTGACTC i canFam3.chr1 I 6 C 0 a score=681512.000000 s hg38.chr19_GL949753v2_alt 783769 256 + 796479 ATACCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggcaaggggtctgctccttCCCTCAAACCCCAACTCAGGTACAGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC s panTro4.chr19 59984310 256 + 63644993 acaCCAAATGCTTCTATGAGATAGTTTTCTCCCCTTGTTCATGAAgaaatgagcccaggcccagtcagatctgcatctgtgtcac--agcccagggccactgtaaccttaggctactgacttccct-ctctgagcctctgttttctc--ctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTACGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56937842 258 + 60714840 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTCTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCTTCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407117 252 - 106955855 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCTCATGAAGAAATGA------GCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttaggctactgacttccct-ctctgagcctctgttttctcctctgtcaatg--------------------------------gggCAAGGGGTCTGCTCCATCCCTCAAACCCCAACTCAGGTAGGGTCAAGCACAGAAAATACCTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715210 258 + 64156825 ACACCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874188 258 + 59248254 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGCAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGAGCCACTGTAACTTTCGGCTACTGACCTCCCC-CTCTGAGCCTCTGTTTTCTCCTCTGTCCATG--------------------------------GGGCAAGGGGTCTGCTCCTTCCCTCAAACACCAACCCAGGTAGGGTCAAGCACAGGAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663392 258 + 50890351 acaCCGAATGCTTCTATGAGATAGTTTTCTCCACTTGCCCATGAAGAAATGAGCCCAGGCCCAGTCAGATCTGCATCTGTGTCAC--AGCCCAGGGCCACtgtaaccttcggctactgacttcccc-ctctgagcctctgttttctcctctgtccatg--------------------------------gggCAACGGGTCTGCTCCTTCCCTCAAACCCCAACCCAGGTAAGGTCAAGCACAGAAAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGAAGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 71504 250 + 138250 ACACCGAGTGCATCTGTGAGGTGGTTTTCTCCACTTGCACATCAAGAAATGAGCCCAGGCCCAGTGAGATGTGCATCTGTGTCAC--AGCCCAGGGCCACtgtcacctgaggctactgacttccct-ctctgagc--ctgttttctcctctgtcagtg--------------------------------gggcaa-gggtctgctccctccctcaAACCCCAACCCAGGTAGGGTCAAGCACAG-AAATACTTGTGGCATGAATGTGATGAGAACACAGAATTGCAGC---- i calJac3.chr22_GL285922_random C 0 I 295 s canFam3.chr1 20147072 280 - 122678785 CTATGGAACGCCTATATGAGG---------ACATTTGCACATGAAgaag-gggcctggtctttgtcagatctgcatttgtgtcacctggcccaggtccactgtgaccttgggctagtggcctccccactctgagcctctgtcttct---gtgcccgtggacaccaatcccagcactgcctgcctcacagagAGTAAGGGGTCTGCTCCTCTCTGCAGACCCCAACCCAGGCAGGACCAAGCTCAGAAGGTACTTGTGGCACGGATGGGATAAGGACCCAGCGTGGCAGAAGTT i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=1008274.000000 s hg38.chr19_GL949753v2_alt 784025 479 + 796479 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACGCACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-TC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCAGGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CAGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTATAACCTGACTTTATCCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca s panTro4.chr19 59984566 479 + 63644993 AAAGAAAGAGAAGTGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CC-TAGCCCCGCTGGCCACCCCTGCAGCCCCC-ATCCTTCACTCAGGCAGTTGCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTTATGTCCTCCCTTGCAGCATGC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATTCTCCCAATAAGCTGGGTGTGGTGggtggctcatgcctgtcatccca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938100 497 + 60714840 AAAGAAAGAGAAGCGTAAGGGCCCTCCTTCCA-CCCCTACCTCCCCCACCCGCTGCTACACACACCAGGACCACCTGCTGGGTAGCCAAGAGCTCACAG-CC-TAGCCCCACTGGCCACCCCTGCAGCCCCC-CTCCTTCACTCAGGCAGTTGCACGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTACTGGCCTGCCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTATCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACCC-----ATGGGAAGAAAGGCCATCGTCCTC---GCCGTTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTGACTTTATCCTCCCACCAAgctgggcgt----ggtggctcatgcctgtcatccca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407369 453 - 106955855 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCTA-CCCCTACCTCCCCCACCCGCTGCTGCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAGCCC-TAGCCCCGCTGGCCACCCCTGCAGCCGCC-CTCCTTCACTCAGGCAGTCTCATGGCCCAGAACACCCCT----ATCTTCTAGGA-TTGACACTGGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCCTGC----------------------CCTCCTCCTCCA-----------------------GCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCGTCCTC---GCCATTGCTAACAC-CGGCCTTGCGTCTCCTCTTTGCCAGATACTGTATTGACAACTC----TCTACAATCTGAGTTTATCCTCCCAATAAgctgggtat----gatggctcatgcctgtcattcca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715468 456 + 64156825 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCTCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55874446 456 + 59248254 AAAGAAAGAGAAGTATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCTGCTGCTTCACACACCAGGACCACCTGCTGGGTAGCCAGGAGCTCACAG-CAGGAGCCCCGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCTGGAACACTCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGACCTGC----------------------CCTCCTCCTCTA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCTGTGGCAGAGCCCTTCGTGTCCTCCCTTGCACCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTGCCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTCCTaataagctgggcgt----ggtggctcatgcctgtcatccca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47663650 455 + 50890351 AAAGAAAGAGAAGCATAAGGGCCCTCCTTCCACCCCCTACCTCCCCCACCCGCTGCTTCACACACCAGGACCACCTGCCGGGTAGCCAGGAGCTCACAG-CC-TCGCCCTGCTGGCCACCCCTGCAGCCCCC--TCCTTCATTCAGGCAGTTTCATGGCCCGGAACACCCCTC---ATCCTCTAGGATTTGACACTGGCTGTCAAACTCGTCCTTCAAAGTGATTCCTGGCCTGC----------------------TCTCCTCCTCGA----------------------GGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCT-GGCCGTGGCAGAGCCCTTCGTGTCCTCCCTTGCAGCACGC-----ACGGGAAGAAAGGCCATCATCCTC---GCCATTGCTAACAC-CGGCCTTGCGTTTCCTCTTTACCAGGTACTGTATTGACAACTC----TCTACAACCTCACTTCATCCTACTaataagctgggcgt----ggtggctcatgcctatcatccca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72049 429 + 138250 aaagaaagaaaAGCATAAGGGTGCTCCTTCCAACCCCCACCTGCCCCACGCCCTGCTGTACACG--AGGACCACCTACTAGGGA-CCGCAACCTAACAG-AC----GCCCACCCCCCACCCCAGCAGCCCTCCCTCCTCCACTCAGGCCGTTTCACGGCC-------CCCTT----GTCCTCTAGGATTTCACACTGGCCGTGAAGCTCGCCCTTCAAGTTGATCCCTGGCCTGC----------------------CCTCCTCCTCCA----------------------CGCAGCCTGTCCTGACCCTCAGCAGCCTC------------------CCCATCGTGGCCTCCCCTGCAGCACAC-----AGGGGAAGAAAGCCCACCACCTCC---ACCAATGCTAACGC-AGGCCTTgcatttcctctgtgcccggtgctgtgtggccaactctgtatgtacaacattacttgatcctcccaataagctgggcgc----cgtggcgcatgcctgtggt-cca i calJac3.chr22_GL285922_random I 295 C 0 s canFam3.chr1 20147352 399 - 122678785 ------------------GGACCCTCATGCCTCTCCCTACAGCTCC------CTGG----------AGAACCACCTGGGATGTGCCCAGCAGTACATGG-CC-TGGCC-----AGCTGCCCCT-----CCCC--TCCGAGGCTCAGGCAGTTATGTGgcctggaacactcctccctctccttcagg--ccacctcgggctgccaaacttgctggtctggttcagctccagctgcc----------------------cctcctcctcca----------------------ggaagcctgccctga-cctcagcagccccccctgggcttctgcagcaccctttgcatcccccatcacaccacACTATGTACGGAAGGAAAGCCCACCATCTCCACTGCTGTTGctaacactcaacctagcatctcctcattgccaggaactgtgcagagagctc----tccataacgtcatttaatcctcccaat---------gt-----------------tgtgatccca i canFam3.chr1 C 0 I 212 e papAnu2.chr19 47962510 905 + 51301725 M a score=32325.000000 s hg38.chr19_GL949753v2_alt 784504 13 + 796479 gcacttcgggagg s panTro4.chr19 59985045 13 + 63644993 gcacttcgggagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938597 13 + 60714840 gcacttcaggagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407822 13 - 106955855 gcacttcgggagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60715924 13 + 64156825 gcactttgggagg i rheMac3.chr19 C 0 I 411 s macFas5.chr19 55874902 13 + 59248254 gcactttgggagg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664105 13 + 50890351 gcactttgggagg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72478 13 + 138250 gcactttgggagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=30700.000000 s hg38.chr19_GL949753v2_alt 784517 23 + 796479 ataaggcaggagtatcacatgag s panTro4.chr19 59985058 23 + 63644993 acgaggcaggagtatcacatgag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938610 23 + 60714840 atgaggcaggagtatcacttgag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103407835 23 - 106955855 acgaggcaggagtatcacatgag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55874915 23 + 59248254 ttgaagcaggatgatcacttgag i macFas5.chr19 C 0 I 1 s chlSab2.chr6 47664118 23 + 50890351 tcaagacaggaggatcacttgag i chlSab2.chr6 C 0 I 383 s calJac3.chr22_GL285922_random 72491 23 + 138250 gcgaggcaggaggatgatttgag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=41212.000000 s hg38.chr19_GL949753v2_alt 784540 40 + 796479 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact s panTro4.chr19 59985081 40 + 63644993 cccaggagttg---------gaga---------------ccagcctgggcaacataaggagact i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56938633 40 + 60714840 cccaggagttg---------gaga---------------ccagcctgggcaacatagggagact i ponAbe2.chr19 C 0 I 3064 s nomLeu3.chr10 103407858 40 - 106955855 cccaggagttg---------gaga---------------ccagcctgggcaacacagggagatt i nomLeu3.chr10 C 0 I 6 s macFas5.chr19 55874939 64 + 59248254 ggcggaggttgcagtgaaccgagattatggccctgcactccagcctgggcaatagagggagact i macFas5.chr19 I 1 C 0 s calJac3.chr22_GL285922_random 72514 40 + 138250 cccaggagctg---------gaga---------------ccagcctgggcaatatagggagact i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=2296.000000 s hg38.chr19_GL949753v2_alt 784580 3 + 796479 cta s panTro4.chr19 59985121 3 + 63644993 cta i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407904 3 - 106955855 tta i nomLeu3.chr10 I 6 C 0 s macFas5.chr19 55875003 3 + 59248254 cta i macFas5.chr19 C 0 I 345 s calJac3.chr22_GL285922_random 72554 3 + 138250 cta i calJac3.chr22_GL285922_random C 0 I 80 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e rheMac3.chr19 60715937 411 + 64156825 I a score=1663.000000 s hg38.chr19_GL949753v2_alt 784583 30 + 796479 cta-tatatatgtgta------------------------------tatatatttatatat s panTro4.chr19 59985124 60 + 63644993 cta-tctatctatctatctatctatctatctatctatctatctagctatctatctatctat i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407907 31 - 106955855 ctattatatatgtata------------------------------tatatatgtatgtat i nomLeu3.chr10 C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e calJac3.chr22_GL285922_random 72557 80 + 138250 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=180.000000 s hg38.chr19_GL949753v2_alt 784613 1 + 796479 a s panTro4.chr19 59985184 1 + 63644993 a i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103407938 1 - 106955855 a i nomLeu3.chr10 C 0 I 115 s calJac3.chr22_GL285922_random 72637 1 + 138250 g i calJac3.chr22_GL285922_random I 80 C 0 e canFam3.chr1 20147751 212 - 122678785 I e ponAbe2.chr19 56938673 3064 + 60714840 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=86662.000000 s hg38.chr19_GL949753v2_alt 784614 109 + 796479 gtctgagatgggaggatcaccccagtaggtcgagactgcagtgagctgtgattatgacactgcattctagcctgggccacagaactagaccttgtctcaattaag--aaaa s panTro4.chr19 59985185 111 + 63644993 gtctgagatgggaggatcaccctagtaggtcgaggctgcagtgagctgtgattatgacactgcattccagcctgggccacagaactagaccttgtctcaattaagaaaaaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941737 110 + 60714840 gtctgagaggggaggatcactccagtaggtcgaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaaagagaccttgtctcaattaaa-aaaaa i ponAbe2.chr19 I 3064 C 0 s nomLeu3.chr10 103408054 109 - 106955855 gtctgagaggggaggatcgctccagtaggtccaggctgcagtgagctgtgattatgacactgcattctagcctgggccacagaacgagaccttgtctcaattaaa--aaaa i nomLeu3.chr10 I 115 C 0 s calJac3.chr22_GL285922_random 72638 109 + 138250 gtctgagacgggaggatcgccccagtacgtcaaggctgcagtgagctgagattatgacactgccttctaacctgggccacagaatgagaccctgtctcaaaaaag--aaaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e chlSab2.chr6 47664141 383 + 50890351 I e papAnu2.chr19 47962510 905 + 51301725 M e macFas5.chr19 55875006 345 + 59248254 I e rheMac3.chr19 60715937 411 + 64156825 I a score=2548.000000 s hg38.chr19_GL949753v2_alt 784723 1 + 796479 a s panTro4.chr19 59985296 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941847 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408163 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716348 1 + 64156825 a i rheMac3.chr19 I 411 C 0 s macFas5.chr19 55875351 1 + 59248254 a i macFas5.chr19 I 345 C 0 s chlSab2.chr6 47664524 1 + 50890351 a i chlSab2.chr6 I 383 C 0 s calJac3.chr22_GL285922_random 72747 1 + 138250 a i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20147751 212 - 122678785 I e papAnu2.chr19 47962510 905 + 51301725 M a score=3276.000000 s hg38.chr19_GL949753v2_alt 784724 1 + 796479 a s panTro4.chr19 59985297 1 + 63644993 a i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941848 1 + 60714840 a i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408164 1 - 106955855 a i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716349 1 + 64156825 a i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875352 1 + 59248254 a i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664525 1 + 50890351 a i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 72748 1 + 138250 a i calJac3.chr22_GL285922_random C 0 I 1088 s canFam3.chr1 20147963 1 - 122678785 a i canFam3.chr1 I 212 C 0 e papAnu2.chr19 47962510 905 + 51301725 M a score=57530.000000 s hg38.chr19_GL949753v2_alt 784725 25 + 796479 aatggggataataggacccattcca s panTro4.chr19 59985298 25 + 63644993 aatggggataataggacccattcca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941849 25 + 60714840 aaTGGGGATAATAGGACCCATTCCA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408165 25 - 106955855 aaTGGGGATAATAGGACCCATTCCA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716350 25 + 64156825 aatggggataagaggacccattcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875353 25 + 59248254 aatggggataagaggacccattcca i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47664526 25 + 50890351 aatggggataagaggacccattcca i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147964 25 - 122678785 aagggggataatggaatccgtttca i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e papAnu2.chr19 47962510 905 + 51301725 M a score=1135854.000000 s hg38.chr19_GL949753v2_alt 784750 442 + 796479 taggatgtggtgaggattaTGCAT--acacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCGAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGGCTCACTCAGCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAACAAAGCAGTAATGCACATGAATGCACCAAATGCCAAAAGCtcgtttactcaacaagtatctctccaacactttctatgtgctagacccaattctgtgtgctgcagattaagtggaggactgatcacacaaaaatctttgccctt-gtgaagcttgca-tttt s panTro4.chr19 59985323 441 + 63644993 taggatgtggtgaggattaTGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAACTATCTCCAAAATGATCaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACATATCTTGAATGAAGCAACAAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccatgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgca----t i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56941874 445 + 60714840 TAGGATGTGTTGAGGATTATGcatacacacacacacaca------cacaca------cacacacaTTTATGATGTACtg---agaagatataagcacac------------------aataagtatctccaaaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tctctTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAATGTGCCTTCTCTGATTTCCAGCCTCACTCACCATAGACCGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATAAATGCACCAAATGCCAAAAGCttgttcactcaacaagtatctctccaacactttctatgtgctagaaccaattccgtgtgctgcagattaagtgggggactgatcacacaaaaatctttgccctt-gtgaagcttgcattttt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408190 436 - 106955855 TAGGATGTGTTGAGCATTATGcat----acacacacacg------cacaca------cacgcacaTTTATGATGTACTG---AGAAGATATAAGCACAC------------------AATAAGTATCTCcagaattatcaagtggcaaagccaggattcagacccacacctgcccgaggctctctgccatcagaccacactata--------tcCCTTTCTCTCTGTTCCTTCATCCCCATCAATCCAAGGC--AAAAACGTGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACCATGGAGGCAACGTATGTTGAATGAAGCAATGAAGCAATAATGCACACGAATGCACCAAATGCCAAAAGCtcgttcactcaacaagtatctctccaacactttctatgtgctagacccaattccgtgtgctgcagattaagtgggggactaatcacacaaaaatctttgccctc-gtgaagcttgct----- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716375 449 + 64156825 taggatatggtgtggattaTGcacacacacacacacaca--cgcacacgca------cacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTGCCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCTAAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55875378 447 + 59248254 taggatatggtgaggattatgcacacacacacacacaca----cacacgca------cacacacatttatgatgtactgagaagaagatataagcacac------------------aataagtatctccaaaattatgcagtggcaaagccaggattcagacccacacctgcccaaggctctctgccgtcggaccacactata--------tctctTTCTCTCTGTTCCTTCATTCCCATCAATCCGAGGCAAAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacttcctgtgtgctagacccaattccgtgtgctgcagactaagtcggggactgaccacacaaaaatctttgccctt-gtgaagcctgca----- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47963447 453 + 51301725 TAGGATATGGTGAGGattatgcacgcacacacacacacacacacacacgca------cacacacatttatgatgTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATgcagtggcaaagccaggattcagACCCACACCTGCCCAAGGCTCTCTGCCGTCAGACCACActata--------tctctttctctctgttccttcATTGCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGctcattcactcaacaagtatCTCTCCAACA-TTCCTGTGTGCTAGACCCAATTCCATGTGCTGCAGATTAAGTAGGGGACTGACCACACAAAAATCTTTGCCCTT-GTGaagcctgca-tttt i papAnu2.chr19 M 905 C 0 s chlSab2.chr6 47664551 453 + 50890351 tagggtatggtgaggattaTGcacacacacacgcacgca--cacacacgcacgcacgcacacacaTTTATGATGTACTGAGAAGAAGATATAAGCACAC------------------AATAAGTATCTCCAAAATTATGCagtggcaaagccaggattcagacccacacctgcccaaGGCTCTCTACCGTCAGACCACACTATA--------TCTCTTTCTCTCTGTTCCTTCATTCCCATCAATCCAAGGC-AAAAAACATGCCTTCTCTGATTTCCAGCCTCACTCAGCATAGACTGTGGAGGCAACATATCTTGAATGAAGCAATGAAGCAATAATGCACATGAATGCACCAAATGCCAAAAGCtcattcactcaacaagtatctctccaacacgtcctgtgtgctagacccaattccgtgtgctgcagattaagt-agggactgaccacacaaaaatctttgccctt-gtgaagcttgca----- i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20147989 412 - 122678785 taggatgctgtgaggattagatgtgcgcacagacaagca---------gcg---------------------tgtactcagaagaaggcagaagcacacccacagtaggtattgagtaatgagtattatCAACACTGTTTAATGGC--AGTCAGAACCTGAACCCACACCCACCTG-GGCTCTCTGCCATCACACCACACCATATGATCGTCTCTCTTTCCCTCTACTCTTTCATCCCTGTCAGCCCAGGAC--AAAGGTGTGCTTTCTCTGGTTTCCAGCCTCCTTCGGCATAGACTATGGGGTTAACGTGTGGTGAACAAAACAATGGAGCA-TAATATATATGAATGCACCAAGGG--------------------caaatatcattccagcacttactgta----------------atgtgcagcag----agtgcagggctgaacgcacagatgtctttgtctttcgtgaaacttaca-ttct i canFam3.chr1 C 0 I 626 e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=406113.000000 s hg38.chr19_GL949753v2_alt 785192 204 + 796479 tttttttttttttttgagatggagtcttgctctgtcacccaggctggagtgcagtggagca---atcttggctcactgcaatctccacctcccgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagacggggtttcaccatgtt s panTro4.chr19 59985764 204 + 63644993 tttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggagcg---atcttggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctccggagtaggtgggactacaggcacccaccaccaagcctggttaattgttttgtatttttagtagagatggggtttcaccatgtt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942319 203 + 60714840 tttttttttttttttgagacagagtattgctctgtcacccaggctggagtgcagtggtgcg---atctcggctcactgcaagctccgcttcccaggttcctgccattctcctgcctcagcctccggagtagctgggactacaggcgcccgccaccatgcccggctaatt-ttttgtattgttagtggagacggggtttcaccgtgtt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103408626 200 - 106955855 ----tttgtttttttcagacagagtctcactctgtcgcccaggctggagtgcagtggcgcg---atcttggctcactgcaagctccgcttccctggttcccgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccaccaccaagcccagctaattgttttgtatttttagtacagacagggtttcaccgtgtt i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60716824 204 + 64156825 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i rheMac3.chr19 C 0 I 3342 s macFas5.chr19 55875825 204 + 59248254 --tttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatcttggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i macFas5.chr19 C 0 I 4 s papAnu2.chr19 47963900 206 + 51301725 tttttttttttttttttgatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-gtttgtatttttagtagaaattgggttttatcatgtt i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47665004 206 + 50890351 ttttttttttttttttggatggaatcttgctctgtcacccaggctggagtgcagtggcatgatcatctcggctcactacaacctccacctcccaggttcaagcaactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccaccaactccggctaatt-ttttgtatttttagtagaaatggggttttatcatgtt i chlSab2.chr6 C 0 I 1847 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I a score=74060.000000 s hg38.chr19_GL949753v2_alt 785396 83 + 796479 agccaggatggtctca----------------atctcctgacctc--gtgatccacacgcctcggcctcccaaagtgctgggattacaggcgtgagccacc s panTro4.chr19 59985968 83 + 63644993 agccagggtggtctca----------------atctcctgacctc--gtgatccacacgccttggcctcccaaagtgctgggattacaggcgtgagccacc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942522 83 + 60714840 agccagaatggtctcg----------------atctcctgacctt--gtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacc i ponAbe2.chr19 C 0 I 378 s nomLeu3.chr10 103408826 83 - 106955855 agccaggatggtatcg----------------atctcctgacctc--gtgatccgccggcctcggcctcccaaagtgctgggattacaggcgtgagccacc i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876033 101 + 59248254 ACgtggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i macFas5.chr19 I 4 C 0 s papAnu2.chr19 47964110 101 + 51301725 acatggtgtgatctcaggtgactgcaacgtccacctcctgggttcaagtgattttcttgtctcagccccccaagaagctgggattacaggtgtgcaccacc i papAnu2.chr19 I 4 C 0 e canFam3.chr1 20148401 626 - 122678785 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=73951.000000 s hg38.chr19_GL949753v2_alt 785479 164 + 796479 acacccggccGCttttttttttttta----agatggagtctcgctctgtcacccaggctggagtgcagtggcacgatcatctcggttcactgcaacctccacctcccaggttcaagtgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac s panTro4.chr19 59986051 161 + 63644993 acacccggccGC---Attttttttta----agatggagtctcgctctgtcagccaggctggagtgcagtggcatgatcatctcgtctcactgcaacctccacctcccaggttcaagtcactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103408909 163 - 106955855 gcacccggccAC-Atttttttttttt----agatggaatctcgctctgtcacccaggctggagtgcagtggcgtgatcatctcggctcactgcaacctccacctcccagtttcaagcgactctcttgccttggtctcccaagaagctgggattacaggtgtgcaccac i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876134 134 + 59248254 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcctcccaaagtgctgggattacaggcatatgccac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47964211 134 + 51301725 acctccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggttgg----------------------------------tctcgaactcccaacctcgagtgatccacccacctcagcttcccaaagtgctgggattacaggcatatgccac i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=600.000000 s hg38.chr19_GL949753v2_alt 785643 1 + 796479 c s panTro4.chr19 59986212 1 + 63644993 c i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409072 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55876268 1 + 59248254 c i macFas5.chr19 C 0 I 2541 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e rheMac3.chr19 60717028 3342 + 64156825 I a score=14981.000000 s hg38.chr19_GL949753v2_alt 785644 64 + 796479 aactctggctaatttttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg s panTro4.chr19 59986213 61 + 63644993 aactctggctaa---ttttt-tttttagtagaaatggggttttatcatgttggtgacatggtgtg i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103409073 65 - 106955855 aactctggctaattttttgtatttttagtagaaatgaggttttatcatgttggTGACATGGTGTG i nomLeu3.chr10 C 0 I 1689 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=20348.000000 s hg38.chr19_GL949753v2_alt 785708 225 + 796479 atctcggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaagctgggattacaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgctttcaccatgttggccaggttggtctcgaactcccaacctcaagtgatcaatccgcctcagcctcccaaagtgctgggattacaggcatgtgccac s panTro4.chr19 59986274 225 + 63644993 atcttggctgactgcaacctccacctccggggttcaagcaattttcttgtctcagcctcccaagaaactgggattggaggtgtacaccaccacccccggctaattttcatattttcagtagagacgtgttttcaccatgttggccaggctggtctcgaactcccaacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgtgccac i panTro4.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47964345 0 + 51301725 C e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=172517.000000 s hg38.chr19_GL949753v2_alt 785933 709 + 796479 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacacagtgggtaagaaggtgaaaagttctccacacaaaaatgaagtagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccataatcccagcactttgggaggccgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcgtggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacctgggggggcggaggttgcggtgagccaagattgcgccactgcactccagcctgggcaacaagagtgaaactctgtctc-aaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcagccagtcctctgagaaggtgacattcaggcaaagatcaaaggaggcaagaaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaacagcaagtgcaaaggccctgaggcaggaccgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagatgagatcagaATCACGTCCCTTAAGGCCTTGCAAGATGTCAGC--- s panTro4.chr19 59986499 712 + 63644993 cgtgcccagccTGtgaagcttgcattctaacggaggagacacagacaaaatgaaccaggaacgcagtgggtaagaaggtgaaaagttctccacacaaaaatgaactagggagagaggaaagagactacaaagaagttgggttgccgggggcggtggctcacacccgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaatgctgtctctactaaaagtacaaaattagccgggcatggtggcgcgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacct-ggggggtggaggttgcggtgagccaagattgtgccactgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaacaaa----------agaagtcgagtaagggatgccgccatttgaaacagggtggtcacccagtcctctgagaaggtgacattcaggcaaagaccaaaggaggcaaggaagtgaggcatgagggtatctggt-agaagagcattccaggcagaggaaatagcaagtgcaaaggccctgaggcaggactgggtctggatgttccaagagcagcaaggaggccagtgtgctgacacacagaaggaagagaTGAGAACAGAATCACGTCCCTTAAGGCCTTGCAAGATGTCAGCttt i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47964345 709 + 51301725 cgtgcccggcctgtgaaGCTTGCATTCTAACAGAGGAGACACAGACAAAATCAACCAGGAATACAATGGGTAAGAAGGTGAAAAGTGCTCCACACAAAAATAAagtagggagagaggaaagagactaCAAAGAAGTTGggttgccaggcacggtggctcatgcctgtaatctcagcactttgggaggctgagacaggcagatcatgaggtcaagagatcgagaccatcc---------tggtgaaaccccatctctgctaaaaatacaaaattagccgggcgtggtagtgcgcacctgtagtctcagctactcaggaggctgaggcagaagaatggcttgaaccc-aagaggcggaggttgtggtgagctgagatcacaccactgcactacagcgtggccaacaagagcgaaactctgtctcaaaaagaaaaaaaaatcaaaaacaaaagtcaGGTAAGGGATGCCGCCATTTGAAACAGGGTGGTCACCCAGTC--CTGAGAAGGTGACATTCAGGCAAAGACCAAAGGAGGCAAGGAAGTGAGGCATGAGGGTATCTGGcaagaagagcattccaggcagagagaacagcaagtgcaaagccCTGAAGGCAGAACCGGGTCTTGGTGTTCCAAGAGCAGCAAGGAGGCCGGTGTGCTGACACACAGAAGGAAGAGATGAGATCAGAATCACATCCCTTAAGGCCTTGCAAGATGTCAGC--- i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e calJac3.chr22_GL285922_random 72749 1088 + 138250 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=546.000000 s hg38.chr19_GL949753v2_alt 786642 1 + 796479 t s panTro4.chr19 59987211 1 + 63644993 t i panTro4.chr19 C 0 C 0 s papAnu2.chr19 47965054 1 + 51301725 T i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73837 1 + 138250 T i calJac3.chr22_GL285922_random I 1088 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e nomLeu3.chr10 103409138 1689 - 106955855 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=2246.000000 s hg38.chr19_GL949753v2_alt 786643 3 + 796479 ttt s panTro4.chr19 59987212 3 + 63644993 ttt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410827 2 - 106955855 -tt i nomLeu3.chr10 I 1689 C 0 s papAnu2.chr19 47965055 3 + 51301725 TTT i papAnu2.chr19 C 0 I 1203 s calJac3.chr22_GL285922_random 73838 3 + 138250 ttt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=1092.000000 s hg38.chr19_GL949753v2_alt 786646 2 + 796479 tt s panTro4.chr19 59987215 2 + 63644993 tt i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410829 2 - 106955855 tt i nomLeu3.chr10 C 0 C 0 s calJac3.chr22_GL285922_random 73841 2 + 138250 tt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60717028 3342 + 64156825 I a score=-1909.000000 s hg38.chr19_GL949753v2_alt 786648 1 + 796479 -t s panTro4.chr19 59987217 1 + 63644993 -t i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410831 1 - 106955855 -g i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720370 1 + 64156825 -t i rheMac3.chr19 I 3342 C 0 s calJac3.chr22_GL285922_random 73843 1 + 138250 a- i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e papAnu2.chr19 47965058 1203 + 51301725 I e macFas5.chr19 55876269 2541 + 59248254 I a score=5361.000000 s hg38.chr19_GL949753v2_alt 786649 8 + 796479 ttttcttc s panTro4.chr19 59987218 8 + 63644993 ttttcttc i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103410832 8 - 106955855 ttttgttt i nomLeu3.chr10 C 0 I 1 s rheMac3.chr19 60720371 8 + 64156825 tttttttt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966261 8 + 51301725 tttttttg i papAnu2.chr19 I 1203 C 0 s calJac3.chr22_GL285922_random 73844 8 + 138250 cgtttttg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e ponAbe2.chr19 56942605 378 + 60714840 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=23232.000000 s hg38.chr19_GL949753v2_alt 786657 16 + 796479 ttttttgagacagagt s panTro4.chr19 59987226 16 + 63644993 ttttttgagacagagt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942983 16 + 60714840 ttttttcagacagcgt i ponAbe2.chr19 I 378 C 0 s nomLeu3.chr10 103410841 16 - 106955855 ttttttcagacagcgt i nomLeu3.chr10 I 1 C 0 s rheMac3.chr19 60720379 16 + 64156825 ttttttgagacggagt i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966269 16 + 51301725 ttttttgagatggagc i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 73852 16 + 138250 ttttttgagatggggt i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e chlSab2.chr6 47665210 1847 + 50890351 I e macFas5.chr19 55876269 2541 + 59248254 I a score=427854.000000 s hg38.chr19_GL949753v2_alt 786673 250 + 796479 ctcgctctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctccgccttccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgc-ccaccaccacgcccggctaa----------------------ttgtttgtatttttagtagagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--ttccacccgcctcggcctcccaaagtgctgggattacagg s panTro4.chr19 59987242 250 + 63644993 ctcactctgtcgcccaggctggagtgcaatggcgcaa-tctcggctcactgcaagctctgccttccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgc-ccaccaccacgcccggctaa----------------------ttttttgtatttttagtggagacggggtttcaccgt----------------------------------gttagcca------ggatggtctcgatctcctgacctcgtg--atccacccgcctcggcctcccaaagtgctgggattacagg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56942999 249 + 60714840 ctcactctgtcacccaggctggagtgcagcggcgtga-tctcggctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccagctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcca------ggctggtctcgaactcctgacctcatg--atccgtccgcctcggcctcccaaagtgctgggattatagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103410857 249 - 106955855 ctcactctgtcgcccagcctagagtgcagtggtgtga-tctcggctcactgcaacctccgcttcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgc-ccgccaccacgcccggctaa----------------------tt-tttgtatttttagtagagacagggtttcaccat----------------------------------gttggcct------ggctggtctcgaactcctgaccccgtg--atccgcctgcctcggcctcccaaagtgctgggattacagg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720395 238 + 64156825 ctcgctctgtcgcccaggctggagtgcagtggcgaga-tctcagctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctggggctacaggcgc-ccacaaccgcgcccggctaa---------------------ttt-tttgtatttttagtagagacaggg-------------------------------------------gttcaccg---------tggtctcgatctcctgaccttgtg--atccgcccgcctcggcctcccaaagtgctgggattacagC i rheMac3.chr19 C 0 I 12 s papAnu2.chr19 47966285 304 + 51301725 ctggctttgttacccaggctggagtgcaatggtacaa-tattggctcattgcaacctccacctccggggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgc-ccaccaccacgactggctaatttttgtgtttctttttttttttt-tttttttttttttttgagacagagtctcgctctgtcacccaggctggagtgtggtggccggatctcagctcactg---------caagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacagg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667057 252 + 50890351 ctcgccctgttgcccaggctggagtgcagtggtgcgattatcggctcaccgcaacctccgcctcccaggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaagtgc-ccgccaccacggccggctaa----------------------tt-tttgtgtttttagtagagatggggttttgtcat----------------------------------gttggctg------ggctggtctcgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacagg i chlSab2.chr6 I 1847 C 0 s calJac3.chr22_GL285922_random 73868 251 + 138250 cttgctctgttgcccaggctggagtgcagtggtgtga-tctcagctcactgcaacatccgtttcccaggtttaagcgattctcctgcctcagcctcctgagtagctggggttacaggtgcaccaccaccacgcctggcTAA----------------------TT-tttgtatttttgtttg-------tttgttttgt----------------------------------gtttgtttttttgAGGTGaacctctgcctcctgggttcaggcaattctcctgcctcagcctcccgagtagctgggatgacagg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=24801.000000 s hg38.chr19_GL949753v2_alt 786923 21 + 796479 tgtgagccactgcgcccggcc s panTro4.chr19 59987492 21 + 63644993 tgtgagccactgcgcccggcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943248 21 + 60714840 cgtgagccaccgcgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411106 21 - 106955855 catgagccaccgcgcccagcc i nomLeu3.chr10 C 0 C 0 s papAnu2.chr19 47966589 21 + 51301725 cgcccgccacctcgcccggct i papAnu2.chr19 C 0 I 4 s chlSab2.chr6 47667309 21 + 50890351 cgtgagccactgtacgtggcc i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 74119 21 + 138250 cacgcaccaccacacccagct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I e rheMac3.chr19 60720633 12 + 64156825 I a score=444907.000000 s hg38.chr19_GL949753v2_alt 786944 282 + 796479 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccgcaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtacagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatctgcctgcctcggcctcccaaagtgctgggattagagatgtga s panTro4.chr19 59987513 282 + 63644993 TGttttctg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcgccacaacctctgcctcccgggttcaagtgattttcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctgggctggtctcgaactcctgtcctcaggtgatccgcctgcctcggcctcccaaagtgctgggattacagatgtga i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943269 282 + 60714840 TGTAttttg--tttttt-----gagatggagcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcaccacaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagagatggggtttcaccatgttggctggactggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagatgtga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411127 283 - 106955855 TGttttttgt-tttttt-----gagatggggcctcgctctcttgcctaggctggagtgcagtggtgcaattatcggctcatcgcaacctccgcctcccgggttcaagtgattttcctgcctcagcctcctgaatagctgggattacaggtgcccaccaccacacctggat-aatttttgtgtttttagtagaaatggggtttcaccatgttggctgggctggtctcgaactcctgacctcaggtgatctacctgcctcggcctcccaaagtgctgggattacagatgtga i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720645 267 + 64156825 tttttttt---tttttt-----gagacggagtctcgctctgtcgcccaggctggagttcagtggcgcga-tctcggctcactgcaagctccgcctcccgggttcacgccattctcctgccccagcctcccgagtagctgggactacatgcgcccacaaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccgtg------------gtctcgatctcctgacctt--gtgatccgcccgcctcggactcccaaagcgctgggattacaggcgtga i rheMac3.chr19 I 12 C 0 s papAnu2.chr19 47966614 248 + 51301725 ttttttttgtatttttt-agtagagacggggtttcaccgtgttagccaggatgg----------------tctcg----------------atctcctgacctcgtg--atccacccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcctaatttttgtgtttctatcagagatggggttttgccatgttggccgggccagtctcgaactcctgacctcagatgatccacccgcctcggcctcccaaagtgctaggattaca------- i papAnu2.chr19 I 4 C 0 s chlSab2.chr6 47667331 274 + 50890351 Gtttttttg--tttctt-----gagatggagcgtggctttgttgcctaggctggagtgcaatggtacaa-tattggctcattgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctcactagctgggattacaggtgcccaccaccacggctggct-aatttttgtgtttttatcagagatggggttttgccgtgttggccaggccagtctcgaactcctgacctcagatgatccacctgcctcggcctcccaaagtgctgggattaca------- i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 74140 244 + 138250 -aatttttg--tatttttagtagagacagggtttcaccttgttgaccaggatgg--------------------------------tctcaatctcttgacctcg-----------tgatccagcctcccaaagtgctgggattataggcatgtgccaccacacctggcctaatttttgtatttttagtagagacggggttttgccatgttggcatggctggtctcgaactcctgacttcaggtgatctgcctgcctcagcctcccaaagtgctgggattccaggcatga i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20148401 626 - 122678785 I e macFas5.chr19 55876269 2541 + 59248254 I a score=103735.000000 s hg38.chr19_GL949753v2_alt 787226 56 + 796479 gccactgta--cccA--Tgcaagtttcttaacccttctcttcctca-ttttctcatctgtg s panTro4.chr19 59987795 56 + 63644993 gccattgta--cccA--Cgcaagtttcttaacccttctcttcctca-ttttctcatctgtg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943551 56 + 60714840 gccactgca--cccA--Cgcaagtttcttaacccttctctgcctca-ttttctcatctgtg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411410 56 - 106955855 gtcactgca--cccA--CAcaagtttcttaacccttctctgcctca-ttttctcatctgtg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720912 58 + 64156825 gccaccgcg--cccggccgcaagtttcttaactcttctctgcctca-ttttctcatgtgta i rheMac3.chr19 C 0 C 0 s papAnu2.chr19 47966862 50 + 51301725 ------gca--ccCA--CGCAAGTTTCTTAACCCttctctgcctca-ttttctcatgtgta i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667605 50 + 50890351 ------gCA--CCCA--CAcaagtttcttaacctttctctgcctca-ttttctcatctgtg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74384 45 + 138250 gcccctgtg--cGCA--CTGAAG----------CTTCTCTGCCT-G-TTTCTTCATCTGTG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149027 59 - 122678785 gcaaccgtaacctca--ggcaaatctcttcacccccatggggctcagtttcttcatctgtc i canFam3.chr1 I 626 C 0 e macFas5.chr19 55876269 2541 + 59248254 I a score=1109236.000000 s hg38.chr19_GL949753v2_alt 787282 382 + 796479 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGAAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TAGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGTGGAACGGGATGGGTGG----GGAGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGGCAGGAGGTGTCCATAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca s panTro4.chr19 59987851 382 + 63644993 agacgaaggcagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTGGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCGGGCA-TTATCAAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGCGGAACGGGATGGGTGG----GGGGG---TAAGGGCATGAGCAGAGGCAGTGATCGTGGACAGGAGGTGTCCACAGAAGACGGGCTGCcactggccctggagacagaaggtcagccccgggt--tcaaatccctccttaacca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943607 376 + 60714840 agacgaagacagcctcccacccagacacactcacctcaaggggctctggggagaaatgatgtggaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGTGATTTCAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTACTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAATTGGGGGG-----GTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACGGGA----TGG----GGGGG---TGAGGGCATGAGTAGAGGCAGTGATCACGGACAGGAGGTGTCCACATAAGACGGACTGCcactggccctggagac---aggtcagccccgggt--tcaaatccctccttaacca i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411466 382 - 106955855 agacgaagacagcctcccacccagacacactcccctcacggggctctggggagaaatgatgtgaaaagctttgctagtaacctctacagcatggagggagttCTCGAAAAGGGATTTCAGA----AAGGTTTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATGTCCTTGGAGCTGGGCCAGGCA-TTATCGAGCTAAATCTTAGCTTTTGTCAGAA-TGGGGGG----AGTCATTGAGGGAAATTTCCAAAGGAAGGGGGAACAGGATGGGTGG----GGGGG---CGAGGGCATGGGCAGAAGCAGTGATCACGGACAGGAGGTGTCCACAGAAGACGGACTGCcactggccctggagacagaagatcagccccgggt--tcaaatccctccttaa-ca i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60720970 390 + 64156825 agaCTAAGACAGCCTCCCACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgggt--tcaaatcctcccttagcca i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55878810 390 + 59248254 agactaagacagcctcccACCGAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAACTTTTGTCAGAA-TGGCAGGGGGAAGTCATGGAGGAAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGG----GTGGCTGTTGAGGGCATAGGCAGAGGCAGTGACAACGGACAGGAGGTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccctgggt--tcaaatcctcccttagcca i macFas5.chr19 I 2541 C 0 s papAnu2.chr19 47966912 394 + 51301725 agaCTAAGACAGCCTCCCACCAAGACACACTTCCCTCACGTGGCTCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTATCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCagggggaagtcatggaggaaaatttccaaaggaagggggaaggggatgggtgggggtgggggtgttgaGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGGTGTCCACAGAACGGGGACTGCCACTGGCCCTGGAGACAGAAGGTCAGCCCCGGGT--TCAAATCCTCCCTTAGCCA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47667655 391 + 50890351 agactaagacaGCCTCCCACCGAGACACACTTCCCTCACGTGGCCCTGGGGAGAAATACTGTGGAAAGCTTTGCTAGTAACCTCTACGGCATGGAGGGAGTTCTCAAAAAGCGATTTTAGA----AAGGTGTTTATGCCTGGGAAGCCTGTTCATTTTTGTGATATCCTTGGAGCTGGGCCAGGCACTTACCGAGCTAAATC-TAATTTTTGTCAGAA-TGGCGGGGGGAAGTCATGGAGGGAAATTTCCAAAGGAAGGGGGAACGGGATGGGTGGG---GGGGGTGTTGAGGGCATAGGCAGAGGCAGTGACCACGGACAGGAGTTGTCCACAGAACGGGGACTGCcactggccctggagacagaaggtcagccccgtgt--tcaaatcctcccttagcca i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74429 379 + 138250 AAACGAAGGCATCCTCCCACGCAGACATACTCCCCTCA-GGAGCTCTGGGGAGAAATCCTGTGGATAGCTTTGCTAGCAAGCCCTACCGCATGGAGGGAATCCCCAAAAACGGATTTTAGAAAGGAAGGTGTTTATGCCTGGTAAGCTTATTCATTTCTGTGATGTCCTCGGAGCTGGGCCAGACACTTAACAAGCTAAATCTTAGCTATAATCAGAA-TGGGGAG------TCATAGAGGGAAATTTCCAAAGGAAGAGGGAGCGGGATGGATGG----GGGC----TGAGGGCATGAGCAGAGACA-TGACCATGGACAGGAGGTGGCCACAgaacagggactgctactggccctggagac---aggtcagccccgggt--tcaaatcctggttca-cca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149086 317 - 122678785 aaacagaga----ccccca-------acactcacctggctgggtttcgggaagaaatggcatgtataatgtggtcagcaaggaccagggcacaggggaagttctcgaaagaagatGCCAAG----------------CCTGAGGAGCTCGTTAACATGTGAGAAGTGCTTGGAGCTG-----------TGTGGGGCTCCATC---------ATCAGAG-----GGG-----TTTACTGGGGGGAATTTCCAGAGGAAGAGG---------------------------CAAGGGCAGGGGTAGAGGCAGGAACAACGGATGGGAGGTGTGCACAG-GGAGGGACAGACCCTGGCCCCGGAGACAGAAAGGCAGGCCTGGGGGATCAAATCCTACCCTTTCCA i canFam3.chr1 C 0 I 467 a score=298369.000000 s hg38.chr19_GL949753v2_alt 787664 100 + 796479 agtgctgaaatggacaagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc s panTro4.chr19 59988233 100 + 63644993 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtcaagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56943983 100 + 60714840 agtgctgaaatggaccagttgctcaacctctctggccttcagcttcctcatctgtggagcaggaatcaaacctcgaacttcctcccgctgttagaatttc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411848 100 - 106955855 agtgctgaaatgggccagttcctcaacctctctggccttcagctgcctcatctgtcaagcagaagtcaaacctcgaacttcctcctgctgttagaatttc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721360 100 + 64156825 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879200 100 + 59248254 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaagcagaaatcaaacctcgaacttcctcccgttgttagaatttc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967306 100 + 51301725 AGTGCTGAAATGGACTAGTTGTTGAACCTCTCTAGCCTTCggcttcctcatctgtcaagCAGAAATCAAACCTCGAACTTCCTCCCGTTGCTAGAATTTC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668046 100 + 50890351 agtgctgaaatggactagttgttgaacctctctagccttcggcttcctcatctgtcaaccagaaatcaaacctcgaacttcctcccgttgttagaatttc i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74808 100 + 138250 ggtgctgaaacggaccagtcgctcaccctccctagacttcagcttccttatctgtcaagcagaaatCCAACCTCGAACTTCCTCCCGTTGTTAGAATTTG i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20149403 467 - 122678785 I a score=1194596.000000 s hg38.chr19_GL949753v2_alt 787764 390 + 796479 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACAGTTA-GTTTCCCAGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTATGCggaggcg-----------gaggcggaggcaggacggccctgggagggagcagg-aggaggGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATCCGGGTCAGGAGAGAAGGGGGCCGGGGCTTGACCAAT----------------------GGGTCTGAGGGACGGGGGGA--------CTGGGGT s panTro4.chr19 59988333 384 + 63644993 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtatgacatcaaatgtactgttcgttgctattattCTGTTGCTACAAGGCAGACGGTTA-GTTTCCCGGCTCCCCTGCAGTACCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCACCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGAAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaagggggccggggcttgaccaat----------------------gggtctgagggacgggggga--------ctggggt i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944083 383 + 60714840 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatgtactgttcgttgttattaGTCTGTTGCTACAAGGCAGATGGTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATCTGTCTGCCAGCCCCGCCCCGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtccggagagaa-ggggccggggcttgaccaat----------------------gggtctgagggacgagggga--------ctggggt i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103411948 379 - 106955855 aagggagttttaaagacagagctttcaactctgacccgtgaacaagcgtgacatcaaatgtactgttcgttgttattattCTGTTGCTACAAGGCA----GTTA-GTTTCCCGGCTCCCCTGCAGTCCCCCCAG-CCCCTCCTAGATATGTCTGCCAGCCCCGCCCTGGGGTCACTCCAGCCAGGCTGTGCCAGGTGAATGCTCAGGTAT------gcg-----------gaggcggaggcaggacggccctggcagggagcagg-aggaggGGCCAGCAGCCTG------GAAGGG-AAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTAAGGAGATccgggtctggagagaagggggccggggcttgaccaac----------------------gggtgtgcgggaggaggggc--------tgcgggc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60721460 372 + 64156825 aagggagttTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGCTATTAGTCTGTTGTTACGAGGCAGAG----A-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATccgggttcagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879300 376 + 59248254 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgt---ttgttattaGTCTGTTGTTACGAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGTTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACAGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggagaagggga--------ctggggt i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967406 376 + 51301725 AAGGGAGTTTTAAAGACAGAGCTTTCAACTCTGACCTGTGAACAAGTGTGACATCAAATTTACTGT---TTGTTATTATTCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGACGGCCCTgggagggagcagg-aggaggggccGGCAGCCTG------GAACGGAAAGGACAGCGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCAGAGAGAAGGAGGCCGGGATTTGACCAAT----------------------GGGTCTGAGGGAGAAGGGGa--------ctggggt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668146 379 + 50890351 aagggagttttaaagacagagctttcaactctgacctgtgaacaagtgtgacatcaaatttactgtttgttgttattattCTGTTGTTACAAGGCAGAGAGTTA-GTTTCCCGGCTCCCCTGCAGT-----CAG-CCCCTCCTGGATCTGTCTGCCAGCCCCGCCCCTGGGTCACTCCAGCCAGGCTGTGCCAGGTGAACGCTCAGGTAT------GCG-----------GAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAACAGAAAGGACAGTGGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCAGGTGAGGAGATCCGGGTTCagagagaaggaggccgggatttgaccaat----------------------gggtctgagggaggagggga--------ctggggt i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 74908 414 + 138250 CAGGAAGTTTT-AAGACAGAGCTTTCAACTCTGACCTGTGAACAAGCCTGACATCAAAT-TACAATTTGTTGTTGTTATTCTGCTGTTACAAGGCAGACAGTTAGGTTTCCTGGATCCCCTGCGGTCCTCCCAGCCCCCTCCTAGATCTGTCTGCCAGCCCCGCCC-AAGGCCACTCCAGCCAGGCGGTGCCAGGTGAATGCTCAGGTAT------GCGGAGGCGGAGGCGAGGCGGAGGCAGGATGGCCCTGGGAGGGAGCAGG-AGGAGGGGCCGGCAGCCTG------GAAGGAAAAGGACAGCAGAGAGCAGGG------------------------CAGAGCCTGA-GCAGGCCGGTGAGGAGATCCAGGTCAGGAGAGAA-GGGCCGGgggtctgaggaaggaggggttgaccctggacaccagggtctgagagaagagggg---------ctggggt i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20149870 394 - 122678785 AAGAGGGTATCTGAGGCAGAGCTGTCGGCGCTGA-----GAACAAGTGTGACATCAGAT-TACTTGTCCTTGAGCTGA---TGTTGTTATGACAGAGACAGTCACAGTTTGTGGCTCCCCCG---------CAC-CCCAGCCCGGATGTCTGTGCCAGCCCCGCCC-AGGGCCACCGCTGCTGGGCTGTGCCAGGTGAGTGCTCAGGTAT------GCG-----------GAGGCAGAGGCGGGGTGGCCT--GGAGGGAGCAGGAAGGAGGGGCCGGCATTCCGCATTCTGGACTCAGGGGACAGCAGAGAGCTGGGCCTCTCCGTGCCACCGCCACCAGACAGAGCCTGACGGTGGCAGGTGAGGAA----GGGGCTAGCCAGGAGGGGCTGGAGGTCCG----------------------------GAGTCCCAAGGAGCAGGCGGCCAGGACTCTGGGGT i canFam3.chr1 I 467 C 0 a score=91807.000000 s hg38.chr19_GL949753v2_alt 788154 46 + 796479 CTGGACTccaggg--------------------------tctcagggaggacgggctgggggtctgaactcc------------ s panTro4.chr19 59988717 46 + 63644993 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944466 46 + 60714840 ctggactccaggg--------------------------tctcagggaggaggggctgggggtctggactcc------------ i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103412327 46 - 106955855 ctggactcctggg--------------------------tctgagggaggaggggctgcgggcttggactCC------------ i nomLeu3.chr10 C 0 M 627 s rheMac3.chr19 60721832 46 + 64156825 ctggactcctggg--------------------------tctgagggaggaggggctgggggcctggactcg------------ i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879676 45 + 59248254 ctggactcctggg--------------------------tctgagggaggagggact-ggggtctggactcc------------ i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967782 45 + 51301725 ctggactcctggg--------------------------tctgagggaggagggact-ggcgtctggactcc------------ i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75322 45 + 138250 ctggacacctggg--------------------------tctcatggaggaggggct-ggggtctggactct------------ i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150264 84 - 122678785 CCAGACACCAGGAAGGCTGGCAGACATAAACCCTTGAGTCCTGAAGAGGTAAGGGCTGGGAGATTGGCCCCATACTGAGGTCAC i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47668525 0 + 50890351 C a score=35117.000000 s hg38.chr19_GL949753v2_alt 788200 24 + 796479 cgggtctgaggga------------------ggagggcctgg- s panTro4.chr19 59988763 24 + 63644993 tgggtctgaggga------------------ggagggcctgg- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56944512 24 + 60714840 tgggtctgaggga------------------ggaggggctgg- i ponAbe2.chr19 C 0 M 415 s rheMac3.chr19 60721878 24 + 64156825 tgggtctgaggga------------------ggagggattgg- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879721 22 + 59248254 tgggtctgaggga------------------ggaggggct--- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967827 24 + 51301725 tgggtctgaggga------------------ggaggggctgg- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75367 22 + 138250 tgggtctgaggga------------------gaagggtct--- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150348 43 - 122678785 AGTGTCTGAGGAATTGGATGAATGACTCTCTGAGGGGACTTGG i canFam3.chr1 C 0 C 0 e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=39442.000000 s hg38.chr19_GL949753v2_alt 788224 41 + 796479 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- s panTro4.chr19 59988787 41 + 63644993 ----------------------ggtcctggactcctaggtctgagggagga-ggggctgagggc- i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721902 40 + 64156825 ----------------------gggcctggactcccgggtct-agggagga-gggattgggggc- i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879743 40 + 59248254 ----------------------gggcctggactcctgggtctgagggagga-gggact-ggggt- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967851 41 + 51301725 ----------------------gggtctggactcctgggtctgaaggaggaggggact-ggggt- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 75389 41 + 138250 ----------------------agccctggacccctaagtctgaaggagga-gggattgggggc- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150391 64 - 122678785 AGTCTTTGGGTCCAGAAGCTCTGAGCCTGAATTCCTGGGCCCTAGAGGAGATGAGGCT-GGGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e chlSab2.chr6 47668525 0 + 50890351 C a score=103139.000000 s hg38.chr19_GL949753v2_alt 788265 65 + 796479 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggagat-ggggcctggactcct-gggtctgagggaggagtgg s panTro4.chr19 59988828 64 + 63644993 ctggattcctgg-------------------------------------gtc--------------------------------------------tgagggaggggctg---ggggcctggacccccagggtccaagggaggagggg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60721942 66 + 64156825 ctggactcctgg-------------------------------------atc--------------------------------------------tgagggaggagggattgggggcctggactcct-gggtctgagggaggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55879783 66 + 59248254 ctggactcctgg-------------------------------------gtc--------------------------------------------tgaaggaggaggggactggggtctggactcct-gggtctgagggaggagggg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47967892 66 + 51301725 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctgggggcctggactcct-gggtctgagggaggagggg i papAnu2.chr19 C 0 M 829 s chlSab2.chr6 47668525 63 + 50890351 ctggactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggct--gggcctggactcct-gggtct-agggaggagggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75430 66 + 138250 ctgaactcctgg-------------------------------------gtc--------------------------------------------tgagggaggaggggctggtgacctggactcct-gggtctgagggaggagggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150455 146 - 122678785 CAGGATCACTGGAGAGAGGAAGCAAAGTGGGGTACACATAGATTAGGGAGTCAAATGCATTGATCCCTGAGAGATTTGGGGGGGCAGCATACTAGGTGAGGGAAGAGGGGCTGGGGGGCCAGACTCCT-GGGTCTGAGGGAGGAGGG- i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M a score=80701.000000 s hg38.chr19_GL949753v2_alt 788330 61 + 796479 actggggtctggactcctgggtctgagggaggaggggactggggtctggactcc--tgggtct s panTro4.chr19 59988892 61 + 63644993 ctgggggcctggtctcctgagtctaagggaggaaggattgggggcctggactcc--tgggtct i panTro4.chr19 C 0 I 1 s rheMac3.chr19 60722008 60 + 64156825 ctggggaccagggctcctgggtctgagggaggaaggg-ctggggcctggactcc--agggtct i rheMac3.chr19 C 0 I 1 s macFas5.chr19 55879849 61 + 59248254 ctgggggcctggactcgtgggtctgaaggaggaggggactggggtctggactcc--tgggtct i macFas5.chr19 C 0 I 292 s chlSab2.chr6 47668588 63 + 50890351 ctgggggtctggactcctgggtctgagggtggagggactgggggtctggacgtccgtgggtcg i chlSab2.chr6 C 0 I 1 s calJac3.chr22_GL285922_random 75496 60 + 138250 ctggaggcctggactcctgagtctgagggaggagggg-ctggggtctggactcc--tgggtct i calJac3.chr22_GL285922_random C 0 I 1 s canFam3.chr1 20150601 61 - 122678785 GCTGGGGTCTGGACTCCTAGGTCTGAGGGAGGAGGGGCTAGGGGCCTGGACTCC--ACAGTCT i canFam3.chr1 C 0 I 1 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=26624.000000 s hg38.chr19_GL949753v2_alt 788391 22 + 796479 aggg-------aagagggact--ggggcctg s panTro4.chr19 59988954 22 + 63644993 aggg-------aggaggggct--ggggCCTG i panTro4.chr19 I 1 M 797 s rheMac3.chr19 60722069 22 + 64156825 aggg-------aggagggact--ggggcctg i rheMac3.chr19 I 1 C 0 s macFas5.chr19 55880202 23 + 59248254 aggg-------aggaggggct-gggggcctg i macFas5.chr19 I 292 C 0 s chlSab2.chr6 47668652 30 + 50890351 agggnnnnnnnnnnaggggct-gggggcctg i chlSab2.chr6 I 1 C 0 s calJac3.chr22_GL285922_random 75557 24 + 138250 aggg-------aggaggggtatgggggcctg i calJac3.chr22_GL285922_random I 1 C 0 s canFam3.chr1 20150663 23 - 122678785 AGGG-------AGAAGGGGCT-GGGGGTCTG i canFam3.chr1 I 1 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M a score=29552.000000 s hg38.chr19_GL949753v2_alt 788413 25 + 796479 gacttctgggtctgagggaggaggg s rheMac3.chr19 60722091 25 + 64156825 gacttctgggtctgagggagggggg i rheMac3.chr19 C 0 M 560 s macFas5.chr19 55880225 25 + 59248254 gactcctgggtctgagggaggaggg i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668682 25 + 50890351 gactcctgggtctgagggaggaggg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75581 25 + 138250 aactcctgggtctgagggaggaggg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150686 24 - 122678785 GACTACT-GGTCAGAGGGAGGAGGG i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e nomLeu3.chr10 103412373 627 - 106955855 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=1500.000000 s hg38.chr19_GL949753v2_alt 788438 1 + 796479 g s nomLeu3.chr10 103413000 1 - 106955855 g i nomLeu3.chr10 M 627 C 0 s macFas5.chr19 55880250 1 + 59248254 g i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668707 1 + 50890351 g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75606 1 + 138250 g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150710 1 - 122678785 G i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e rheMac3.chr19 60722116 560 + 64156825 M e panTro4.chr19 59988976 797 + 63644993 M a score=2100.000000 s hg38.chr19_GL949753v2_alt 788439 1 + 796479 c s nomLeu3.chr10 103413001 1 - 106955855 c i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722676 1 + 64156825 c i rheMac3.chr19 M 560 C 0 s macFas5.chr19 55880251 1 + 59248254 c i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47668708 1 + 50890351 c i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 75607 1 + 138250 c i calJac3.chr22_GL285922_random C 0 I 287 s canFam3.chr1 20150711 1 - 122678785 C i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=306149.000000 s hg38.chr19_GL949753v2_alt 788440 218 + 796479 tgggggcctggactcctgggcctgagggagg-aggggctggggcctggatgcctgcattgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCTTCACATGTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--ACCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGCGCCCCCGGACCCCAGGTCCCA-GCCCCAGCA- s nomLeu3.chr10 103413002 217 - 106955855 tgggggcctgaactccaggatctgagggagg-aggggctggggcctggctgcctgcattgagggaggag--gctggggTAGGAGTTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--TCCA--CTCAGCACCATGAGCACCGCCACAGGGTAAGTGCCCC-GGACCCCGGGTCCCA-GCCCCAGCG- i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722677 218 + 64156825 tgggggtctggactcctgggtctgagggagg-agggactggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACGGGGCAGGTCCCCCTGGCccccaggcccca-gccccagcc- i rheMac3.chr19 C 0 I 18 s macFas5.chr19 55880252 219 + 59248254 tgggggcctggactcctgggtctgagggagg-aggggccggggcttggatgcctgtgttgagggaggag--gctggggTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACCGGGTAAGTGCCCCTGGCccccaggccccaggccccagcc- i macFas5.chr19 C 0 I 19 s chlSab2.chr6 47668709 216 + 50890351 t--gggcctggactcctgggtct-agggagg-aggggctggggcctgaatgcctgtgttgagggaggag--gctggagTAGGAATTAGAGGCTCCT----ACTGGCCAGGCCCTCACATCTTTGCTGGCTCCCAGGGCACCTCCAGGTGGGCAGGAGCT--CCCA--CTCAGCACCATGAGCACCGCCACTGGGTAAGTGCCCCCGGCccccaggccccaggccccagcc- i chlSab2.chr6 C 0 I 19 s calJac3.chr22_GL285922_random 75895 211 + 138250 tggtgacctggactcctggatct-agggagg-aggagctgggacctggacACCTGC-TTGAGGGAGGAG--GCTAGGGTAGGAATCAGAGGCTCCC----ACTGTCTGGGCCCTCACATCTTTGCTGCCTCCCAGGGCACCTCCAGGTGGGAAAAGGCTTCCCCT--CTCAGCACCATGAGCACCACCACCGGGTAAGTGCccctggccccca--------gccccagcc- i calJac3.chr22_GL285922_random I 287 C 0 s canFam3.chr1 20150712 223 - 122678785 TGGGGGCCTGGATTCCTAGGTCTGAGGGAGGAAAGGGCTGGGGTCTGGACTCCTGGTCAGAGGGAGGAGGAGCAGGGGCCAAAATCACAGATACCTCAGGCCAGGTCAGTCCCTCACCTCTTTGATGGTTTCCAGGGCACCTCCAGGT-GGCAGGAGCT--CCCATTCTCCACACCATGAGCACTAGCACCGGGTAAGTGTCCCTTGTCCCC---TCCC--CCCCCAGGCT i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56944536 415 + 60714840 M e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=39489.000000 s hg38.chr19_GL949753v2_alt 788658 24 + 796479 CGCCTCCCG------------------------CCTCCCCTCGCCTCC s ponAbe2.chr19 56944968 24 + 60714840 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i ponAbe2.chr19 M 415 C 0 s nomLeu3.chr10 103413219 24 - 106955855 CGCCTCCCG------------------------CCTGCCCTCGCCTCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722913 24 + 64156825 CGCCTCCCG------------------------CCTCCGCTCGCCTCC i rheMac3.chr19 I 18 C 0 s macFas5.chr19 55880490 24 + 59248254 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i macFas5.chr19 I 19 C 0 s chlSab2.chr6 47668944 24 + 50890351 CGCCTCCCG------------------------CCTCCCCTCGCCTCC i chlSab2.chr6 I 19 C 0 s calJac3.chr22_GL285922_random 76106 48 + 138250 cgcctcccatctgcgtctgcccctgcccctgcccctgcccctgcctcc i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150935 24 - 122678785 GCCCTGTCA------------------------CCTCTGCCAGCCTCG i canFam3.chr1 C 0 C 0 e papAnu2.chr19 47967958 829 + 51301725 M e panTro4.chr19 59988976 797 + 63644993 M a score=25424.000000 s hg38.chr19_GL949753v2_alt 788682 9 + 796479 TCACCCACA s ponAbe2.chr19 56944992 9 + 60714840 TCACCCACA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413243 9 - 106955855 TCACCCACA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722937 9 + 64156825 TCACCCACA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880514 9 + 59248254 TCACCCACA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968787 9 + 51301725 TCACCCACA i papAnu2.chr19 M 829 C 0 s chlSab2.chr6 47668968 9 + 50890351 TCACCCACA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 76154 9 + 138250 tcacccaca i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150959 8 - 122678785 -TCCCTGCA i canFam3.chr1 C 0 C 0 e panTro4.chr19 59988976 797 + 63644993 M a score=14324.000000 s hg38.chr19_GL949753v2_alt 788691 5 + 796479 CCCGC s panTro4.chr19 59989781 5 + 63644993 CCCGC i panTro4.chr19 M 797 C 0 s ponAbe2.chr19 56945001 5 + 60714840 CCCGC i ponAbe2.chr19 C 0 I 5 s nomLeu3.chr10 103413252 5 - 106955855 CCCGC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60722946 5 + 64156825 CCCGC i rheMac3.chr19 C 0 I 5 s macFas5.chr19 55880523 5 + 59248254 CCCGC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47968796 5 + 51301725 CCCGT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47668977 5 + 50890351 CCCGC i chlSab2.chr6 C 0 I 5 s calJac3.chr22_GL285922_random 76163 4 + 138250 cctg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20150967 5 - 122678785 CCCAC i canFam3.chr1 C 0 C 0 a score=-872.000000 s hg38.chr19_GL949753v2_alt 788696 15 + 796479 TTGCGGCAGCCCAGA s panTro4.chr19 59989786 15 + 63644993 TTGCGGCAGCCCAGA i panTro4.chr19 C 0 C 0 s nomLeu3.chr10 103413257 3 - 106955855 ------------AGA i nomLeu3.chr10 C 0 I 2 s macFas5.chr19 55880528 3 + 59248254 ------------AGA i macFas5.chr19 C 0 I 2 s papAnu2.chr19 47968801 3 + 51301725 ------------AGA i papAnu2.chr19 C 0 I 2 s calJac3.chr22_GL285922_random 76167 4 + 138250 -----------cAGA i calJac3.chr22_GL285922_random C 0 I 2 s canFam3.chr1 20150972 8 - 122678785 -------AACTGACA i canFam3.chr1 C 0 C 0 e ponAbe2.chr19 56945006 5 + 60714840 I e chlSab2.chr6 47668982 5 + 50890351 I e rheMac3.chr19 60722951 5 + 64156825 I a score=717039.000000 s hg38.chr19_GL949753v2_alt 788711 228 + 796479 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaatgttgaaaaattgg------------- s panTro4.chr19 59989801 228 + 63644993 CTGTTTGCGGCGGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCTCTCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttt-ggccctcacactcagtgctgat-gtaaccctgg---tcagaggacatcacctcctggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattag------------- i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945011 228 + 60714840 CTGTTTGCGCCAGCCCAGACTCTGGCCCAAGCCCCGACACTCAGGAGGAAGCCAGAGCCGCTCCCCTCCCTACCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgctgat-gtaacccttg---tcagaggatatcacctcttggagcctcagcccctcctctgtgacacagggacaacgttgaaaaattgg------------- i ponAbe2.chr19 I 5 C 0 s nomLeu3.chr10 103413262 227 - 106955855 CTGTTTGCGGCAGCCCAGACTCTGGCCCAAGCCCGGACGCTCAGGAGGAAGCCAGAGCTGCGCTCCTCCCTGCCCagcctggggttaggggcccccactgcagagc-agacaggcctgagctccagttc-ggccctcacactcagtgccaat-gtaaccctgg---tcagcggacgtcacctcttggagcctcag-ccctcctctgtgacacagggacaatgtcgaaaaactgg------------- i nomLeu3.chr10 I 2 C 0 s rheMac3.chr19 60722956 228 + 64156825 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i rheMac3.chr19 I 5 C 0 s macFas5.chr19 55880533 228 + 59248254 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgtgctccagctc-ggccctcacactccatgctgat-gtaaccccgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i macFas5.chr19 I 2 C 0 s papAnu2.chr19 47968806 228 + 51301725 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAGGAAGCCAGAGCCACTCTCCTCCCTGCCCAGCCTGGGGTTAGGGGCCCCCACTGTAGAGC-AGACAGGCCTGAGCTCCAGCTC-GGCCCTCACACTCCGTGCTGAT-GTAACCCCGG---TCAAAGGACATCACCTCTTGGAGCCTCAGCCCCTCCTCTGTGACACAGGGACAATTTTGAAACATTGG------------- i papAnu2.chr19 I 2 C 0 s chlSab2.chr6 47668987 228 + 50890351 CTGTTTCTGGCAGCCCAGACTCTGGCCCAAGCCCGGACACTCAGGAAGAAGCCAGAGCCACTCTCCTCCCTGCCCagcctggggttaggggcccccactgtagagc-agacaggcctgagctccagctg-ggccctcacactccgtgctgat-gtaaccctgg---tcaaaggacatcacctcttggagcctcagcccctcctctgtgacacagggacaattttgaaacattgg------------- i chlSab2.chr6 I 5 C 0 s calJac3.chr22_GL285922_random 76173 227 + 138250 CTGTTTCCTGCAGTGCAGACTATGG-----GCCTGGACACTCAGGAGGAAGCCAGAGCCGCTCTCCTCCCTGCCCAGCCTGTGGTCaggagcacccgctgtagagc-agacaggcctgagctccagctg-ggcactcatactcagggctgatcttaaccctagtcatcaaaggacatcacctcttggagcctcagcccctcctctgtgaaacagggacaatTTTGAAAAACTGG------------- i calJac3.chr22_GL285922_random I 2 I 1229 s canFam3.chr1 20150980 211 - 122678785 ---TTTACAGCAGCCCAG------------GTCTGGACACTGAGAAGGAAGCCTGAGCTGCTC-CTTCCCTG-CCGGTCTATGCT--GGAGCTACTGctccagtgcaagaca--cctgggtccaaacccagacactaacactcaggg-tggt-gtgactctaa---cca------acaacct----gagcctgagcccctcctctgtgaaagagggacaataaaaaaaaaataaaaaaaaaaaaaaG i canFam3.chr1 C 0 C 0 a score=331082.000000 s hg38.chr19_GL949753v2_alt 788939 126 + 796479 agggatagt------gcattacaggacttagc----------tgaccacctcactgacagcaggtgctcaactcataggagtcgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG s panTro4.chr19 59990029 126 + 63644993 agggatagt------gcattacaggacgtagc----------cgaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATCGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945239 126 + 60714840 agggatagt------gcattacaggacttagc----------cgcccacctcactgacagcaggtgctcaactcataggagccgctattgtGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413489 125 - 106955855 agggatagt------gcattacaggacttagc-----------gaccacctcactgacagcaggtgctcaactcataggagccgctattGCGATTGTTATGTTGTTAGTAAATATTAACCCTTTGCTAGAAAATCAGGGCTG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723184 126 + 64156825 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880761 126 + 59248254 tgggatagt------gcattacaggacttagc----------cggccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969034 126 + 51301725 TGGGATAGT------GCATTACAGGACTTAGC----------CGGCCACCTCACTGACAGCCGGTGCTCAGCTCATAGGAGCCTCTGTTGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669215 126 + 50890351 tgggatagt------gcattacaggacttagc----------cgaccacctcactgacagccggtgctcagctcataggagcctctgttGGGATTGTTATCTTGTTAGTAAATAGTAACCCTTTGCTAGAAAATCAGGACTG i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151191 140 - 122678785 AGGGACAATATGAGAGCCTGACAGG--TTAATGAAGGTACAAGGCTTATCTGACTCACAGCAGGTACTCCACTCACAGGAACTGCCACTGCGGCTGTTAGCGTGTTATTAAATATTGACTCTTTGCAGGCAAATCTGGGCTG i canFam3.chr1 C 0 I 208 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=273950.000000 s hg38.chr19_GL949753v2_alt 789065 101 + 796479 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA s panTro4.chr19 59990155 101 + 63644993 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945365 101 + 60714840 TTTATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAaacaatgagagatgagtcaaaatacctgcatggtaggtagtgagctctctggcccaga i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413614 101 - 106955855 TTTATAATGAAGACTCGAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGAGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGCTCTCTGGCCCAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723310 101 + 64156825 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880887 101 + 59248254 TTCATAATGAAGACTCAAGTCTCCTAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969160 101 + 51301725 TTCATAATGAAGACTCAAGTCCCCCAGAGTAAGCAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCGCTGGCCCAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669341 101 + 50890351 TTCATAATGAAGACTCCAGTCCCCCAGAGTAAGGAGGGAGAAAAACAATGAGCGATGAGTCAAAATACCTGCATGGTAGGTAGTGAGTTCTCTGGCCCAGA i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20151539 92 - 122678785 TTTCTAATAAAG-TTCAAGTCTCCTGGGGTGAGCAAGGAGAAGCCCAAACAGAGGCCCCTGTGAATAGCTGCAT--------GTAAGTTCCCCAGCACAGC i canFam3.chr1 I 208 C 0 e calJac3.chr22_GL285922_random 76400 1229 + 138250 I a score=208081.000000 s hg38.chr19_GL949753v2_alt 789166 59 + 796479 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAACAGGAGTTTGG s panTro4.chr19 59990256 59 + 63644993 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945466 59 + 60714840 ggtaatcaaATTGTGGTGACATCAGACTGGCAGGAGTGGGATGAGGAACAGGAGTTTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413715 59 - 106955855 GGTAATCAAATTGTGATGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723411 57 + 64156825 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55880988 57 + 59248254 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969261 57 + 51301725 GGTAATCAAAT--TGGTGACATCAGACTGGCAGGAGCGGGATGAGGAACAGGAGTTTGG i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669442 59 + 50890351 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCGGGATGAGGAATAGGAGTTTGG i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 77629 58 + 138250 GGTAATCAAATTGTGGTGACATCAGACTGGCAGGAGCAGGATGAGGAA-AAGACTTTGG i calJac3.chr22_GL285922_random I 1229 I 474 s canFam3.chr1 20151631 59 - 122678785 AGTAATCAAACTGTGTGGAGATCTGACTGGCAGGAGAAGGATGAGGAGCAGAGATTTGA i canFam3.chr1 C 0 C 0 a score=1545048.000000 s hg38.chr19_GL949753v2_alt 789225 507 + 796479 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAATCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCACCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTATAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctacgttacagaaagaaaaactgaggcaggagagattaaatcctcttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACACT-CCCCTACCACCCAGCACCACCGCCT s panTro4.chr19 59990315 507 + 63644993 GAAAAAGGGTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCGTGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACGGG---AGGAGACAGAGAAGGATGTGGTTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGaatgataataacagttattgaggcttcagaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatgg--------------tta----ctatgttacagaaacaaaaactgaggcaggagagattaaatccccttctgaaggtcttatggcaaggaggcagtagacagagggtttgaatc-------------ccggactATGCCATGGTAGAGATCACAGT-CCCCTACCACCCAGCACCACCGCCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56945525 506 + 60714840 G-AAAAGGCTTTTTCAGTTC----CCCTGACGCCA-CCTGATCGCTGAGCTTCTGTTATGTGCCGGCAAGTGGGGGATTCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATTGAGGACAGG---AGGAGACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGTGAGTAGGAGGGGACGCAGATAATTCCCTGTCTACTTCAGATACCACTAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttatcgaggcttcaaaatacttcacctgcatcatctgattgaatttgcccaacagccctacgagatgg--------------tta----ctatgttacagaaagaaaaactgaggcaggagagattaaatccacttctcaaggtcttatgg-aaggaggcagtagacagaaggtttgaatc-------------cgggagtatgccatgatacagatcacact-cccctaccacccagcaccacCGCCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103413774 516 - 106955855 GAAAAAGGGTTTTGCAGTTC----CCCTGACGCCA-CCTGATGGCTGAGCTTCTGTTATGTGCATGCAAGT-GGGGATTCAAGAAT--TCTTAGGAAAGGTAACCGTAGGAAGAAATTGAGAAC------AGGACACAGAGAAGGATGTGGCTGGGAAGCGCCTGGCCCATGGGAGTGGGAGGGGAAGCAGATAATTCCCTGTCTACTTCAGATACCACGAATGCTATTGTAACCATTCccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAATAACAGTTACTGAGGCttcaaaatacttcacctccatcatctgattgaatttgcccaacagccctatcagatgg--------------tta----ctatgttacagaaagagaaactgaggtaggagagattaagtctcctcctcaaagtcttatggcaaggaggcagcgcacagagggtttgaatccaggactttgaatcaggactctgCCATGGTAGAGATCACACT-CCCTTACCACCCAGCACCACCG-CT i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723468 505 + 64156825 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGtaacaatccccatttattgagcaacttctgtgtgctaagccctggcagcatcttaAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggttgagaccacgctccccctaccacccagcaccaccGCCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881045 505 + 59248254 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCAAGGACAAG---AGGAGACAGAGAGGGATGCGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGAGGGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTATTGTAACAATCCCcatttattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAaaatacttcacctgcatcatctgactgaatttgcccaacagccctaccagatag--------------tta----ctatgttacagaaag--aaaccgaggca-gagagattaagtccccttctcaaggtcttatggcaaggaggcagtagacagaggatttgaatc-------------caggactatgccatggtcgagaccacgctccccctaccacccagcaccaccGCCT i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969318 506 + 51301725 GAAAAAGGGTTTATCAGTTC----CCCTGACGCCA-CCTGATCTCTGAGCTTCTGTTATGTGCGTGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTAGGAAGAAATCGAGGAcaag---aggagacagagagggatGCGGCTGGGAAGCGCCTGGCccatgggggtgggaggggaaacAGATAATTCCCTGTCTACTTCAGATGCTACTAATGCTATTGTAACAATCcccatttattgagcaacttcTGTGTGCTAAGCCCTGGCAGCATCTTAAGAATGATAATAACAGTTATTGAGGCTTCAAAATACTTCACCTGCATCATCTGACTGAATTTGCCCAACAGCCCTACCAGATAG--------------TTA----CTATGTTACAGAAAG--AAACCGAGGCAGGAGAGATTAAGTCCCCTTCTCAAGGTCTTATGGCAAGGAGGCAGTAGACAGAAGGTTTGAATC-------------CAGGACTATGCCATGGTAGAGACCACACTCCCCCTACCACCCAGCACCACCGCCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47669501 505 + 50890351 GAAAAAGGGTTTATCAGTTC----CCCTGACACCA-CCTGATCTCTGAGCTTCTGTTATGCGCATGGAAGT-GGGGATCCAAGAAT--TCTTAGGAAAGGTAACCTTGGGAAGAAATCGAGGACAAG---AGGAGACAGAGAGGGATGTGGCTGGGAAGCGCCTGGCCCATGGGGGTGGGA-GGGAAACAGATAATTCCCTGTCTACTTCAGATACTACTAATGCTGTTGTAACAATCCCcattgattgagcaacttctgtgtgctaagccctgGCAGCATCTTAAGAATGATAataacagttattgaggcttcaaaatacttcacctgcatcatctgactgaatttgcccaacagccccaccagatag--------------tta----ctatgttacagaaag--aaaccgaggcaggagagattaagtccccttctcaaggtctcatggcaaggaggcagtagacagaggatttgaatc-------------caggactATGGCATGGTGGAGACCACACTCCCCCTGCCACCCAGCACCGCCGCCT i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78161 501 + 138250 GAAAAAGGGTTTTTCAGTAC----CCCCGACTCCACCCTTATCTCTGAGCTTCTGTTATTTACATGCAAGT-TGGAATTCAAGATTCCTCTTGGGAAAGGTAACCTTAGGAAGGAATTGGGGACAGA---AGGTGTCACAGAAGGATGTGGCTGGGAAGCGCCTGGCCCAGAGAAGTGGGAAGGGAAGAAGATAATT-CCTGTCTACTTCAGATACCACTAATGCTATagtaatgattcccatttattgagcaacttctgtgtgctaaaccctggcagcatcttaagaatgataataacagttattgaggcttcgaaatatgtcacctgcatcatc----tgaatttgcccaacagccttgctaggtag-----------------------atattacagaaggagaaactgaggcaggagagattaagacctcttctctaggtcttatgtcaaggaggcagtagacagagggtttgaatc-------------caggaccatgccacggccgagaccacactccccctaccacccagcaccaccGCCT i calJac3.chr22_GL285922_random I 474 C 0 s canFam3.chr1 20151690 437 - 122678785 TTCAAAGTATTTCTTGTCCCTCATCCCTGATCCTA-CCTGAGCTCTGAATTTCCATCATTTCT------GT-G---------GAAT--TCTTGGAGAAGTTGA-CTTAGAAGGA----GAGGCCAGGAGCAGGAGATGGAGAAGGATTTGGCTGGGAAGAGCCTGGCCCATGGGAGTAGGAGGGGG---AGATAAGTCTCTGTCTACACCAAAT---ACTAATGCTGTTGTAAAAAACCccatttactgagcacctactgtgtgctacccttt----gcatcgtagcactgacagtta-agttattgaggctgtgaaccctctcaac-------tctccatgaatcca-ccaacagctctaccagatggaggctattggataattaacccctatctcagagaaaaggaaaccaaggcgggagatattcagtctcctccccagggtcttatggcaagacagtatt-gacagaggatgccaag--------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 a score=323905.000000 s hg38.chr19_GL949753v2_alt 789732 176 + 796479 GACCTGACCTGtctttttttttttttttttttttttgagatggagtctcactctgctgccaggctggagtgcagtggcacgatctggactcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctggcactacaggcgcccaccaccacac s panTro4.chr19 59990822 173 + 63644993 GACCTGACCTGtc---ttttttttttttttttttttgagatggggtctcactctgctgccaggctggagtgcagtggtgcgatctcgactcactgcaacctccgcctcccaggttcaagtgattctcctgccttagcctcccacgtagctgggactacaggcgcccgccactacac i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946031 172 + 60714840 GACCTGACCTGtc----tttttttgtttgtttgtttgagatggggtctcactctgctgccaggctggagtgcagtggcgcgatctcgactcactgcaacttccgcctcccaggttcaagtgattctcctgccttagcctcccatgtagctgggactataggcgcatgccaccacac i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414290 169 - 106955855 GA-CTGACCTGtc------tttttttttctttttttgagatggggtctcactctgctgccaggctggaatgcagtggcgcaatctcgactcactgcaacctccgcctcctaggttcaagtgattctcctgccttggcctcccacgtagctgggactacaggcgcacgccaccacac i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60723973 158 + 64156825 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacaggcacccgccaccacac i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55881550 154 + 59248254 GACCTGtct--tc--------------ttttttttcgagatggggtctcg--ctgttgccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacag----ccgccaccacac i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969824 157 + 51301725 gacctgtct--tc---------------tttttttcgagatggggtcacg--ctgttgccaggctggagtgcagtggcgcgatctgagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctctcacgtagctgggactacaggcacccgccaccacac i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670006 166 + 50890351 GACCTGtct--tc------ttctttttttttttttcgagatggggtctca--ctgttgccaggctggagtgcagtggcacgatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccacgtagctgggactacagtcacccgccaccacac i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152127 57 - 122678785 ----------------------------------------------------------ccaggtctgTGGGCGGAGG--------------------------GGCTCCCAAT----------------------------------ACTGGAACCACACAC-TCTACCACCACCC i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=14525.000000 s hg38.chr19_GL949753v2_alt 789908 6 + 796479 ccagct s panTro4.chr19 59990995 6 + 63644993 ccagct i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946203 6 + 60714840 ccagct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414459 6 - 106955855 ccagct i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724131 6 + 64156825 ccagct i rheMac3.chr19 C 0 M 372 s macFas5.chr19 55881704 6 + 59248254 ccagct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969981 6 + 51301725 ccagct i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670172 6 + 50890351 ctggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94119.000000 s hg38.chr19_GL949753v2_alt 789914 56 + 796479 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca s panTro4.chr19 59991001 56 + 63644993 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtctca i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946209 56 + 60714840 aa--tttttgtatttttagtagagacagggtttcaccatgttggccaagatggtcttg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414465 56 - 106955855 aa--cttttgtatttctagtagagacagggtttcaccacgttggccaagatggtctcg i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55881710 58 + 59248254 aatttttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47969987 56 + 51301725 aa--tttttgtattgttagtagagatggggtttcaccatgttggccaggctggtctcg i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670178 56 + 50890351 aa--tctttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcg i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C e rheMac3.chr19 60724137 372 + 64156825 M a score=13244.000000 s hg38.chr19_GL949753v2_alt 789970 5 + 796479 atctc s panTro4.chr19 59991057 5 + 63644993 atctc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946265 5 + 60714840 atctc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414521 5 - 106955855 atctc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724510 5 + 64156825 atctc i rheMac3.chr19 M 372 C 0 s macFas5.chr19 55881768 5 + 59248254 atctc i macFas5.chr19 C 0 I 386 s papAnu2.chr19 47970043 5 + 51301725 atctc i papAnu2.chr19 C 0 I 312 s chlSab2.chr6 47670234 5 + 50890351 atctc i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=79264.000000 s hg38.chr19_GL949753v2_alt 789975 34 + 796479 ttgactttgtgatccgcccacctctgcctcccaa s panTro4.chr19 59991062 34 + 63644993 ttgactttgtgatccgcccacctctgcctcccaa i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946270 34 + 60714840 ttgactttgtgatccgcccacctttgcctcccaa i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414526 34 - 106955855 ctgacctcgtgatccgcctgcctctgcctcccaa i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724515 34 + 64156825 ttgactttgtgatccgcccgtctcggcctcccaa i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882159 34 + 59248254 ttgactttgtgatccgcccatctctgcctcccga i macFas5.chr19 I 386 C 0 s papAnu2.chr19 47970360 34 + 51301725 ttgactttgtgatccgcccatctctgcctcccga i papAnu2.chr19 I 312 C 0 s chlSab2.chr6 47670239 34 + 50890351 ttgactttgtgatccacccatctctgcctcccga i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152184 0 - 122678785 C e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=94391.000000 s hg38.chr19_GL949753v2_alt 790009 38 + 796479 agtgctgggattacaggcgtgagccaccgcgcccagcc s panTro4.chr19 59991096 38 + 63644993 agtgctgggattacaggcgtgagccaccgcgcccagcc i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946304 38 + 60714840 agtgctgggattacaggcgtgagccaccacgcccagcc i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414560 38 - 106955855 agtgctgggattacaggcgtgagccaccgcgcccggcc i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724549 38 + 64156825 agtgctgggattacaggcgtaagctaccgcgtccggcc i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882193 38 + 59248254 agtgctgggattacaggcgtgagctaccgcgtccggcc i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970394 38 + 51301725 agtgctgggattacaggcgtgagctaccgcgcccggcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670273 38 + 50890351 agtgctgggattacaggcgtgagctaccgcgcctggcc i chlSab2.chr6 C 0 C 0 s canFam3.chr1 20152184 22 - 122678785 GGTACCAGAGTTACCTGTGTGA---------------- i canFam3.chr1 C 0 C 0 e calJac3.chr22_GL285922_random 78662 0 + 138250 C a score=3276.000000 s hg38.chr19_GL949753v2_alt 790047 1 + 796479 T s panTro4.chr19 59991134 1 + 63644993 T i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946342 1 + 60714840 T i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414598 1 - 106955855 T i nomLeu3.chr10 C 0 I 134 s rheMac3.chr19 60724587 1 + 64156825 T i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882231 1 + 59248254 T i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970432 1 + 51301725 t i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670311 1 + 50890351 T i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78662 1 + 138250 T i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152206 0 - 122678785 C a score=857482.000000 s hg38.chr19_GL949753v2_alt 790048 285 + 796479 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTCaataataataataataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTCATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAGTCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct s panTro4.chr19 59991135 273 + 63644993 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------aataataataataataataataataataaCCCTTCCATCGCTCCCCATTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATCCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGC-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAACTGCGTCT i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946343 262 + 60714840 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------------AATAATAACAATAATAATAACCCTTCCATCGCTCCCCATTACCTTTGTAATG-ATCCCTTGCTGCCCTGCTTGGCATT-----TCCATAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGT--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414733 260 - 106955855 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC------------------------AATAATAACAATAATAACCATTCCATCGCTCCCCGTTACCTTCGTAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGATCTGCCCCCAATTCCACAGTCTCTCTCATTCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT--GGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i nomLeu3.chr10 I 134 C 0 s rheMac3.chr19 60724588 270 + 64156825 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCACAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882232 270 + 59248254 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCTGCAGGGTCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970433 270 + 51301725 acctgtCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCtc---------------aataatagtaaaaataataataataacccttCCATAGCTCCCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGCCCCCAATTCCACAGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGTGCCAAGTCTATCTATGGTGAGT-AGGAGG--CAAGGGAGCCCCAGGCCCATAGAACTGGGTCT i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670312 270 + 50890351 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTCTCCTGCTC---------------aataatagtaaaaataataataataaCCCTTCCATGGCTCTCCATTACCTTCATAATGAAGCCCTTGCTGCCCTGCTTGGCATT-----TCCGCAGGATCCGTCCCCAATTCCACGGTCTCACTCATCCCTCTTTTCTTCACCAGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGG--CAAGGGAGCCCCAGGCCCATAGAActgggtct i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78663 247 + 138250 ACCTGTCTTCTTAAAGTCCAGCTCTGGCTCTGAGCTC---------------------------------AAAATAATAATAA----CCTTCCATGGCTCTGCATTGCCCTTGTAATGAAGCCCTGGCT-CCCTGCTTGGCATT-----TCTGCAGAATCTG-CCCCAATTCCACAGTCTCTCTCACCCCTCTTTTCTTCACCAGCCCAGAACCTGCCCCGAAGCCAAGCGCCAAGTCTATCTATGGTGAGT-GGGGGGGAGAAGAGAATCCCAGGCCT-CAGAACTGGGTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152206 235 - 122678785 -------------AAATCCAGCTCTGGACCGGCCCTCCTCTGCTC-------------------------AGAA-------------CCCTCCATGGTTCCCCACTGCCCTTACGATGAAGTCTTTGCTGCTCTGCTTGGCACTCAAGATCCCCATGATCT--CCCAATTCCCAAGGTCTCTTTCATTCTTTTTTCCTTATCCAGCCCAGAGGCTGCCCCCAAACCAAGTGCCAAGTCAATCTATGGTGAGTTTCAGAG--CAAGAGAACTCCAGGC---TGAAACTGGGTCT i canFam3.chr1 C 0 C 0 a score=45991.000000 s hg38.chr19_GL949753v2_alt 790333 17 + 796479 aaagaaacaggacctgg s panTro4.chr19 59991408 17 + 63644993 AAAGAAACAggacctgg i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946605 17 + 60714840 AAAGAAACAGGACCTGG i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103414993 17 - 106955855 aaagaaacaggacctgg i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724858 17 + 64156825 AAAGAAACAGGACCTGG i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882502 17 + 59248254 aaagaaacaggacctgg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47970703 9 + 51301725 AAAGAAACA-------- i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670582 17 + 50890351 aaagaaacaggacctgg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 78910 17 + 138250 AAAGAAACAggatctgg i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C a score=36543.000000 s hg38.chr19_GL949753v2_alt 790350 20 + 796479 catccagggtcttggaggag s panTro4.chr19 59991425 20 + 63644993 catccagggtcttggaggag i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946622 20 + 60714840 CATccagggtcttggaggag i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415010 20 - 106955855 catccagcgtcttggaggag i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724875 20 + 64156825 AATccagggtcttggaggag i rheMac3.chr19 C 0 C 0 s macFas5.chr19 55882519 20 + 59248254 aatccagggtcttggaggag i macFas5.chr19 C 0 C 0 s chlSab2.chr6 47670599 20 + 50890351 aatccagggtcttggaggag i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e papAnu2.chr19 47970712 0 + 51301725 C a score=4159.000000 s hg38.chr19_GL949753v2_alt 790370 8 + 796479 gaggggct s panTro4.chr19 59991445 8 + 63644993 gaggggct i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724895 8 + 64156825 gagaggct i rheMac3.chr19 C 0 C 0 s chlSab2.chr6 47670619 8 + 50890351 gagaggct i chlSab2.chr6 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C a score=4201.000000 s hg38.chr19_GL949753v2_alt 790378 17 + 796479 gggggtctggactcctg s panTro4.chr19 59991453 17 + 63644993 gggggtctggactcctg i panTro4.chr19 C 0 C 0 s rheMac3.chr19 60724903 15 + 64156825 --gggcctggactcctg i rheMac3.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C a score=1628.000000 s hg38.chr19_GL949753v2_alt 790395 17 + 796479 agtcagagggaagaggt s panTro4.chr19 59991470 17 + 63644993 agtcagagggaagaggt i panTro4.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e papAnu2.chr19 47970712 0 + 51301725 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C a score=8355.000000 s hg38.chr19_GL949753v2_alt 790412 198 + 796479 gctgggggtctggactcctgggtcagagggaagaggggctggggggctggactcctaggtttgagggaggaggggctgggggcctggactcctgagtcagagggaagaggtgctgggggc-ctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctggggggctgg s papAnu2.chr19 47970712 157 + 51301725 -----GGACCTGGAATCCAGGGTC------------------------------------ttggaggaggagaggctggg--ccTGGACTCCTGAGTCTGAAGGAGGAgggcctgggggctctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctgg i papAnu2.chr19 C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e calJac3.chr22_GL285922_random 78927 0 + 138250 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=42736.000000 s hg38.chr19_GL949753v2_alt 790610 204 + 796479 actcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggggctggactcctgggtcagagggaagaggggctggggg-gctggactcctgggtcagagggaagaggggctgggggtctggactcctgagtcagagggaagaggggctggggggctggactcctgggtcagagggaa s papAnu2.chr19 47970869 205 + 51301725 actcctgggtctgaaggaggagggcctggggtcctggactcctgggtctgagggaggaggggctggggtcctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtctgaggaaggtggggctgggggcctggactcctgggtctgaaggaggagggcctgggggcctggactcctgggtctgagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 78927 200 + 138250 actcctgggtctgagggaggaggggctggga--ctagactcctgggtctgagggaagaggggctgtggacctagagtcctgggtctgagggaggaggggctgggg--tctggactcctgggtctgagggaagaggggct-ggggtctggactcctgggtctgagggaggagggactgtggacctagagtcctgggtctgagggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e macFas5.chr19 55882539 0 + 59248254 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=14907.000000 s hg38.chr19_GL949753v2_alt 790814 37 + 796479 gaggggctgggggcctggactcctgggtcagagggaa s macFas5.chr19 55882539 35 + 59248254 gagaggct--gggcctggactcctgggtctgaaggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971074 36 + 51301725 gagggact-ggggtctggactcctgagtctaagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79127 36 + 138250 gaggggct-ggggtctggactcctgggtctgagggaa i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e nomLeu3.chr10 103415030 0 - 106955855 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=29122.000000 s hg38.chr19_GL949753v2_alt 790851 37 + 796479 gaggggctgggggc-ctggactcctgggtcagagggaa s nomLeu3.chr10 103415030 37 - 106955855 gaggggctgggggc-ctggactcctgggtctgagggag i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882574 38 + 59248254 gagggcctgggggctctggactcctgggtctgagggag i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971110 37 + 51301725 gaggggctggggac-ctggactcctgggtctgagggag i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79163 36 + 138250 gaggggctggggt--ctggactcctgggtctgagggag i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e ponAbe2.chr19 56946642 0 + 60714840 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=55374.000000 s hg38.chr19_GL949753v2_alt 790888 67 + 796479 gag---gggctgggggtctggactcctgggtcagagggaggaggggctgggggg-ctggactcctgggtca s ponAbe2.chr19 56946642 66 + 60714840 gag---gggctgggg-cctggactcctgggtccgagggaggaggggctgggggc-ctggactcctgggtct i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415067 45 - 106955855 gag---gggctgggg----------------------gaggaagggctgggggc-ctggactcccgagtca i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882612 70 + 59248254 gaggaagagctgaaggtctagactcctgggtctgaggaaggtggggctgggggc-ctggactcctgggtct i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971147 66 + 51301725 gag---gggttgagg--ctggactcctgggtctgaggaaggtggggctgggggctctggactcctgggtct i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79199 66 + 138250 gag---gggctggggacctagagtcctgggtctgagggaagaggggctggggt--ctggactcctgggtct i calJac3.chr22_GL285922_random C 0 C 0 e canFam3.chr1 20152441 0 - 122678785 C e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=19963.000000 s hg38.chr19_GL949753v2_alt 790955 17 + 796479 gagggaagaggggctgg- s ponAbe2.chr19 56946708 17 + 60714840 gagggaggaggggctgg- i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415112 17 - 106955855 gagggaagaggtgctgg- i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882682 17 + 59248254 gaaggaggagggtctgg- i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971213 16 + 51301725 gagggaggggggact-g- i papAnu2.chr19 C 0 C 0 s calJac3.chr22_GL285922_random 79265 17 + 138250 gagggaggaggggctgg- i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152441 18 - 122678785 GAGGGAGGAGGGGGCTGA i canFam3.chr1 C 0 C 0 e chlSab2.chr6 47670627 0 + 50890351 C e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=69560.000000 s hg38.chr19_GL949753v2_alt 790972 32 + 796479 gggcctggactcctgggtttgagggaggagg---g s ponAbe2.chr19 56946725 35 + 60714840 gggcctggactcctgggtctgagggaggaggaagg i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415129 32 - 106955855 gggtctggactcctgggtcagagggaagagg---g i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882699 32 + 59248254 gggcctggactcctgggtctgaaggaggagg---g i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971229 32 + 51301725 gggtctggactcctgggtctgagggaggagg---g i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670627 32 + 50890351 gggcctggactcctgggtctgagggaggagg---g i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79282 32 + 138250 gaacctggacttttgggtctgagggaggagg---g i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152459 32 - 122678785 GGGCCTGCACCCCAGGGTCTGAGAGAGGAGG---G i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C e panTro4.chr19 59991487 0 + 63644993 C a score=117133.000000 s hg38.chr19_GL949753v2_alt 791004 57 + 796479 gctgggggc-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta s panTro4.chr19 59991487 57 + 63644993 gctgggcgg-ctggacttctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946760 57 + 60714840 gctggaggt-ctggactcctgggtcagagggaagag---gggctggg---------------gg-gctggactccta i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415161 57 - 106955855 gctgggggt-ctggactcctgggtcagagggaagag---gggcgggg---------------gg-gctggactccta i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55882731 59 + 59248254 cctgggggctctggactcctgggtctgaggaaggtg---gggctggg---------------ggctctggactcctg i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971261 56 + 51301725 gttgagg---ctggactcctgggtctgaggaaggtg---gggctggg---------------ggtTCTGGACTCCtt i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670659 60 + 50890351 gctgggggc-ctggactcctgggcctgagggaggaggaagagctgaa---------------gg-tctagactcctg i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79314 57 + 138250 gctgcgtac-ctagagtcctgggtctgagggaggag---gggctggg---------------ag-cctggactcttg i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152491 71 - 122678785 -CTGGGGGC-CTGGACTCTTGGGTCTGAGAGGGGAG---GTCCCAGGACAAGGGGGAACCATGG-TCCGGATTCCTA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60724918 0 + 64156825 C a score=7933741.000000 s hg38.chr19_GL949753v2_alt 791061 2366 + 796479 ggtttgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTAGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGCCAGGGGCCTCGGGTCCACT-TAATCTGCCAGCCTTTCCTCCAGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGGCAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCATGGCAGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCGGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCaga-------tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctAAGGCGGGATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCGTGGACGTGCGTGGG-TTCACAGGTGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCGTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCACTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC s panTro4.chr19 59991544 2391 + 63644993 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggagga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCATTGCCTCACCTCAGTCACGGATATGAAGTCAGGGGCCTCGGGTGCACT-AAATCTGCCAGCCTTTCCTCCGGGCCAGCTGTTGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACACAGCCCTGCATGAGGAAGGGGTAGACAAGGTCCAGAGGAATCCACAGAGGCGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggggtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCATGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacagggctgttatccctaaccccctaaccgcctgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------Tgggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcctggggctaaggcgggATCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACATGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGG-------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTTCGGGGCATGGACGTGCGTGGG-TTCACAGGCGTGAACGGTAGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAACGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGCAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCCCCTCCTCGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATCCCTCCCTATATCGGATTTCTCCCTACCTCCCTATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTCATTCCCTTTGAGCCTTTTGAGCCT--GTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56946817 2347 + 60714840 tgtctgagggagaaggggctgggg-gcctggactcctgagttctgatggaggagggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTCGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTGTGTTCCCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCTCTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTTGTGCTGGACAGTGGGACCATGGAGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACACACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgccggcaaggagcctccagta-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacagagggcactggg---------aggaggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcacgtccttcctctggga-------------accccagcctccttcttgagccttaatagccttacctattaaacaggggtgttatccctaaccccctaaccgcatgaggttgcc---------ctgaCCTGCTGGCTCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCCGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCAGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGA-------CAggctggctctgggggtggagctggaactgggcgga-gcctggagccggggcggacatgggtggggcctctagg---tggggcggggcctgggactaaggcgggATCAGAGCAAGGAAGGGCAGGGAACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTT---GAGATTGGACCCAG---GGTCAAGACAGAACGTGAAGGTGGGA-----------------------------TGAGGACATGGACAGAACATGGCCAAGAAGGGTCTCGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TTCACAGGCGTGAACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCC-GGGTAGGAAGTGGGTGC----------GGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCAGGGTCTCTGGGAAGCCGGTTTCACCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGGGCTGACGCCTTCTCCAGAACTC-TGCTTCTT--------TTCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTTTCCCTACCTCGTCGAACTTGTTCACTCCCTTTGAGCCTTTTGCGCCT--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103415218 2339 - 106955855 ggtctgagggaggaggggctgggg-gcctggactcctggg-tctgatggaaga-ggggctgg---gcctggactCCCAGGCTCATTCTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTTGTTATGGCTGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTG-----CCCCAGGACATCTTCTGGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTTGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCCATAAAATGGACCTCCGTTGCCTCATCTCAGTCATGGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTCCTCCCGGCCAGCTGTGGTGCTGGACAGTGGGACCACGGAGACAAATCAAGACAGAGCCCTGCATGAGGAGAGGGTAGACAAGGTCCAGAGGAACCCAAGGAGGCGCCTGGTGCTCTAATGGAGGTGGTAGGGGGCACAGCAGGAGACCCCAGGAGGCATTTAGAAGGAGAGAGCTataatccagactccttccctgcccacaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatggaagggaaacaaagggcactggg---------agg-ggagctg-------atttgtggaacaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCCGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTG-TTTCTCCGTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGATGATGGCGTGCACACTGTGGAAGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACATGGgtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgcgaatcttggctactgcacgtccttcctctgggaactctggcgagggaccccggcccccttcttgagccttaatagcctcatctattaaacaggggtgttatcgctaaccccctaaccgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCCGCCATCTCACCCCGCAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGTTGCTCGTGTGCCAGGAACCCGAGCGCGCCCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGAA-------CGGGCTGGCTCTGGGGGTGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGAGGCGGGGCCTGGGGCTAAGGCGGGACCAGAGCAAGGAAGGGCAGGGGACCTGGGAAGGAAGTTCTGGAAGGCGGCGGGGTTT---GAGATTGGACCCAG---GGTCAAGATAGAACACGAAGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGCCAAGAAGGGTCTGGGGGAGCAGCCAGGACGAGGA------------TGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGGGCGTGG-------------------------ACGGTGGCCGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGTGAGGCCC-GGGTAGGAAGTGGGTGCGGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATTCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGTTAGCCGGTTTCCCCTCCTTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGCCTGGAACAGAACAAGAGTTTTGCATGGAGTCAAGCACACCCTAG-TCGACTCTTGTCTGTACCTCCCAGACGAGCTGACCCCTTCTCCAGAACTC-TGCTTCTT--------TCCTCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTATC-------------------------CCTCCCTATAT---CGGATTTCTTCCTACCTCGTTGAATTTGTTTACTCTCTTTGAGCCTTTTGAGCCTCAGTGTGTCTCGTTCTGCGCCCTGGATTTCCCCCTCCCTGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60724918 2367 + 64156825 ggtctgaaggaggagggcctgggggctctggactcctggg-tctgagggagga-ggggctgagg-gcctggactcccaggCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCAAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCATGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAggagagagctgtaatccagactccttccctgcctgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCgggttggctctgggggcggagctggaactgggcgga-gcctggagccggggcggaaatgggtggggcctctagg---tggggcggggcatagggctaaggcgggATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i rheMac3.chr19 C 0 M 697 s macFas5.chr19 55882790 2364 + 59248254 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgagg-gcctggactCCCAGGCTCATTTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGTCAGTTTGCCCATCTGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactccttccctgcccgcaaggagcctccagtc-tg-tgagaagccagactcaggtgctagtcactctgatgaaagggaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGggggcacgtgggtgggaggagtgtct--------------ggggcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtctttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacaggggtgttatccctaactccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCATACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCAGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCATAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAACCAGGACGAGGA------------TGGGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCCGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGTACGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCCGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AAGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-CACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTACCTCCCAGACGAGATGACTC----CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47971317 2349 + 51301725 ggtctgagggaggaggggttgagg---ctggactcctggg-tctgagggagga-ggggctgggg-gcctggactcccaggctcattttctttctcccctgGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGATCTATGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGATAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACTTCAGTCATGGATATGAAGTCAGGGACCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCATGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACGAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCCAGACTCCTTCCCTGCCCGCAAGGAGCCTCCAGTC-TG-TGAGAAGCCAGACTCAGGTGCTAGTCACTCTGATGAAAGGGAAACAAAGAGCGCTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGtgatcaaggaaggcttcctggaggaggtgtggTTAGTCTCAGGCTGAAAG--TGATTATTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGGTGGGAGGAGTGTCT--------------GGGGCAGGGA---------CTTCAGGGGGTCTGGGTGTGAATCTTGGCTCCTGCACGTCCTTCCTCTGGGAACTCTGGCGAGGGACCCCAGCCCCCTTCTTGAGCCTTAATAGCCTCATCTATTAAACAGGGGTGTTATCCCTAACCCCCTAACTGCGTGAAGTTGCC---------CTGACCTGCTGGCCCACACTCCCGTCGCCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTTGGGGTGAGCGGACGGCGTTCGGGTTGGCTGTgg----------------gggcgga-gcctggagcaggggcggaaatgggtggggcctctagg---tggggcggggcctagggcTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAACGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGCACATGAGGGTGGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTGGGGGAGCAGCCAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGGCGTGCATGGG-TCCATAGGCGTGAACGATGGCCGCACGTGGGCTGGGACGGAGCAGAAAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGTGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCggtttcccctccctgtgcct-------------------cacTCT-----------------------ACAA-CACCAGACTGGAACAGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAACTCTTACTTCTT--------TTCCCTGTTCCCTGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGCCT-------CA--GTGTGTCTCGTTCTGCGCCCCGGATTTCTCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCTGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47670719 2368 + 50890351 ggtctgagggaggaggggctgggg--cctggactcctggg-tctgatggagga-ggggctggggagcctggactCCCAGGCTCA-TTTCTTTCTCCCCTGGCAGAGCAGAGGAAGCGTTACTCCACAGTGGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTT-CCCCAGGACATCTTCTAGG-GCAAAGGT-----GGCCTCAGGAGACAGGGCTTTGGAAAGCAGCTGGGCCCCCAAGCAGGAAGCATGT-GGAAAGCCAGTTTGCCCATCCGTAAAACGGACCTCCGTTGCCTCACCTCAGTCATTGATATGAAGTCAGGGGCCTCGGGTCCACTCAAATCTGCCAGCCTTTTCTCCGGGCTAGCTGTTGTGCTGGACAGTGGGACCACGGGGACAAATCAAGACACAGCCCTGCATGAGGAGGGGGTAGACAAGGTCCAGAGGAACCCACGGAGGTGCCTGGTGCTCTAATGGAGGTGGCAGGGGGCACAGCGGGAGACCCGAGGAGGCATTTAGAAGGAGAGAGCTGTAATCcagactcctcccctgcccgcaaggagcctccagtc-tg-tgagaaaccagactcaggtgctagtcactctgatgaaaggaaaacaaagagcactggg---------aggaggagctg-------atttgtggagcaggtgatcaaggaaggcttcctggaggaggtgtggttagtctcaggctgaaagtctgattaTTCTGGGGG-ATTCTGAGCCCACCTGGCATCATCTTGGGCCTCACTGCTGTCTCCCTGGT-CCGTACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGCTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGTGCCAGGGGGCACGTGGgtgggaggagtgtct--------------ggagcaggga---------cttcagggggtctgggtgtgaatcttggctcctgcatgtccttcctctgggaactctggcgagggaccccagcccccttcttgagccttaatagcctcatctattaaacacgggtgttatccctaaccccctaactgcgtgaggttgcc---------ctgaCCTGCTGGCCCACACTCCCGTCGTCATTTAGTAGTACCATCATTTCGGGGCCTCAGTTTACCCTGCCATCCCACCCGGCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGTTGTGATGCGGTGATGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGGGGTGAGCGGACGGCGTTCGGGTTGGCTCTGGGGGCGGAGCTGGAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGCCTCTAGG---TGGGGCGGGGCCTAGGGCTAAGGCGGGATCACAGCAAGGAAGGGCATGGGACCTGGGAAGGAAGTTCTGAAAGGGAGTGGGGTTTGAGGAGACTGGACCCAG---GGTCAAGATAGAACATGAGGGTTGGA-----------------------------TGAGGACATGAACAGAACATGGGCAAGTAGGGCCTAGGGGAGCAGCTAGGACGAGGA------------TGCGGGCGAGAAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGTTTGGGGCAGGGACAGGTGTAGGGCGAGGG-GTGAGTCCAGAGTGTGGACGTGCGTGGG-AACATAGGCGTGAACGATGGCCGCAAGTGGGCTGGGACGGAGCAGAGAAATCGGCCAGGGGCGTGGCCC-GGGTAGGAAGGGGGTGCGGCGAGGGGAGGCGTGGCCTGAT-GTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGGGAGCGCAGGGCGGCGGCGCTCAGGTGAG-----------------AGGGAAGAAG------TTGGCGGGGTCTCTGGGAAGCCGGTTTCCCCTCCCTGTGCCT-------------------CAGTCT-----------------------ACAA-TACCAGACTGGAACGGAGCA--AGTTTTGCATGGAGTCAAGCACAACCTAG-TCGAGTCTTGTCTGTATCTCCCAGACGAGCTGACTCCTT-CCCAGAATTCTTACTTCTT--------TTCCCTGTTCCCCGTCC--AGGCCCTCAGTTTCACTCTAGAGAGGTGCTACC-------------------------CCTCCCCATAT---CGGATTTCTCCCTACCTCGTTGAACTTGTTTACTCCCTTTGAGTCT-------CA--GTGTGTCTCGTTCTACGCCCCGGATTTCCCCCTCCATGGACCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 79371 2328 + 138250 gttctgagggaggagAggctgggg-----------ttggg-gct---ggggct-ggggctgg---ggctggACTCCCAGGCTCATTCTCCTTCTCCCCCCGCAGAGCAGAGGAAGCGTTACTCCACGGTTGTTATGGCCGATGTATCCCAGTACCCAGTCAATGTGAGTCTGGGGTCTGTGTTTCCCCAGGTCATCTCT--GG-GCAAAGGT-----GCCCTCAGGAGATAGGGCTTATTAAAGCAGTTGGGCCCCCAAGCAGAAAGCATGT-GGAAAGTCAGTTTGCTCATCCACAAAATGGACCTCCATTGCCTCGCCTCAATTATAGATATGAAGTCAGGGACCCCGGGTCCACTCAAATCTGCCAGCCTTTCCTCT--GCCAGCTGTTGTGCTGGACAGTGGGACCATGG-GACAAATC-AGACACGGCCCTGCATGAGGAGGGGGTAGACAAGGTGCAGAGGAACCCACGGAGGCGCCTGGTGCTCTAATGGAGGAGGCAGG-----------------------------TAGAAGGAGCGAGCTATAATCCAGACTCCTTCCCT-----------GCCTCCAGTC-TG-GAAGAAGCCAGACCCAGGTGCTAGTCATGCTGATGAAAGGGAAGCAAAGGGCACTGGG---------AGGAGGAGCTG-------ATTTGTGGAGCAGGTGATCAAGGAAGGCTGCCT---AGAGGTGTGGTTAATTTCGGGCTGGAAGTCTGATTATTCCGGGGGAATTCTGAGCCCACCTGGCATAATCTTGGGCCTCACTGCTTTCTCCGTGGT-CCATACCAGCACCTGGTGACGTTCTGCCTGGGTGAGGAAGATGGTGTGCACACCGTGGAGGATGCCTCCAGGAAGCTGTCTGTCATGGACAGCCAGGGCCGAGTCTGGGCACAAGAGATGCTGCTGCGTGTATCCCCCGACCACGTCACGCTGCTTGACCCGGCCTCCAAGGTGCCagggggtatgagcgtgggaagagtgtct--------------agggcaggga---------cttcggtggatttgggtgtgaatcttggctcctgcacgtccttcctctaggaacaatggcgagggagcccagccccattcttgagtcttaatagcctcatctattgaacaggggtgttatctctcaccccctaaccgcgcgaggtGGCC---------CTGCCCTGCTGGCCCACACTGCCCTCACC-TTTAGTCCTATCACCAGTTCGAGGCCTCAGCTTACCCC-CCATCCCACCCGCCAGGAGGAGCTGGAGTCGTACCCGCTGGGCGCCATCGTGCGCTGCGACGCGGTGTTGCCACCCGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCCGAGCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTGGGGGTGAGCGCACCGGGTTCGGGCTGGCTC--GGGGTGGAGCTGAAACTGGGCGGA-GCCTGGAGCCGGGGCGGAAATGGGTGGGGTTTCCAGG---AGGGGCGGGGCCTGGGGCAAAGGCGGGGTCAGAGCAAGGAAGGGCAAGGGGCCTGGGAAG------------GGGAGTGAG-------GAGGCTGGACGTAG---AGTCAAGATAAAACATGAGGCTGGGACGTAGTGGAGGCTAAGGGCTGGAGTAGTCTGAGGACATCAACAGAACATGGACAAGAAGGGTCTGGAGGAGCAGCCAGAACGATGA------------TG-GGGCAAGGAACCACCTGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGAGAGGG-GTGAGTCCAGGGCGTGGACGTGCGTGGG-TCCACAGGCAGGAACGATGGCCGCTCGTGGACTAGGAGCGAGCGGAAAACTCGGCCAGGGGCGTGGCTCGGGGTGGGAAGTGGGTGGGGCGTGGGGAGGCGTGGCCTGACGGCGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAATTACCGCTCGGGCCGCGGAGAGCGCAGGGCGGCGGCGCTGAGGTGAG-----------------AGGGAAGAAG------TTGGTGGGACCTCTAGGAAGCCGGTTTCCCCTCCCTGGGCCTGTCTCATCTGAGAAGTGGGCAGACA-----------------------CCAACCACCAGCCTGGAACAGAACC--AGTGTTGAATGGAGTCAAGCACGCCCTCG-TCGAG---CGTTTGTAGCTCCCAGACGAGGTGGATCCTCTTCCAGGACGC-TCCTTCTT--------TTCCCTGTTCCCTGTCT--AGGCCCTGGGTTTCACTTTGGAGA--TGCTACT-------------------------CCTCCCTA-GT---GGGATTTCTCCCCAACTCTTTGAACCTGTTTGCTCCCTTTGTGCCT-------CA--GTGTGTCTCGTTCTGGGCCCCGAATTTCCCCCTCCCTGGATCCCTCAGTGGACCCAGCCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20152562 2392 - 122678785 AGTCTGAGGGAGGAGGGGCTGGGG---TCTGACTCCTGGG-TCTGAGGCAGTA-GGGGCTGA---GTCT------TCTGGATTATTCTCCTTCTCCCCC-ACAGAGCAGAGGAAACGTTATTCCACTGTGGTTATGGCAGATGTTTCGCAGTATCTAGTCAATGTGAGT-TGGGGTCTGCGTGGCCACAGGGAGTCTTGTGGGAGGAAAGGCAGGCAGGCCTGGGAAGATGGAAGTGTTGAAAGCAGTTGGGTCTCCAAGCAGAAAGAAGCTAGGAAACTGAGTTTGGTCATATGCAAGATGGGTTTC---TGCCTTTGCTCAGAAGTGGGTATTGAGTAGAAG---TCAACTCCACTTGAAT---CCAAGTTTTCCTCCAGACCAGCTCTTGTGCTGGACAGTCAGGCCATGGGGACAA--TGTTACATATCCTCGTACGAGTACAGGTCAAA----------------------GGgtgccaggtgctctaatggaggcag--------------------------aggtgcttagaagggactagatataaccaa-----------tgccttcaaggagcctccagtcgtgctgggaggacaggtcccagtgctagtcactccgatgaaagcaaaacaaaggaaactcaggggccccataggtggagcaggtgccccataagtggagcaggtgat-aaggaaggctttcccaaggaggtgtgtttagtctcgggctggaaggctg---aTGCCAGGGG-ATGCTGAGCCCAGCTGACATTAATCTGGGACTCACTGCTTTCTCGGCACCGCCGTGCCAGCACCTGGTGACATTCTGCCTGGGTGAAGAGGATGGCGTGCACACTGTGGAGGATGCCTCCCGGAAGCTGGCCGTCATGGACAATCAGGGCCGCGTCTGGGCCCAAGAGATGCTGCTGCGCGTGTCTCCGGACCACGTCACGCTGCTTGACCCCATCTCCAAGGTGCCAGGGGACACGTGGGTGGAAAGCGCAGTTGGCCTGAGCGAGCAGGGGCATGGAGAGCTTGACCCtccggacgtctaagtgtgaatattggcctctgcatgtccttcctttgggaactttggcaagagatctccacccccattttgagtattattagtctcccctattaaacaggggtgttatccttaaccccctaacctcgcagggttgcctgtgCAGTGCCAGCGTACAAGCTGTCACTGCTGTCACCATTT--TAGTACCACTGGTTCCAGGCCTCAGTTTACCC-GCCATCCCACCCTGCAGGAGGAGTTGGAGTCGTACCCGCTGGGGGCCATCGTGCGCTGCGACGTGGTGATGCTGCCAGGCCGGAGCCGCTCGCTGCTGCTGCTCGTGTGCCAGGAGCCTGAGCGCACGCAGCCGGATGTGCACTTCTTCCAGGGCTTGCGTCTGGGGGTGAGCGGGCCTGGTCAGGGGAGCCACCGGGGACAGGGCTGAGACCCTGTGGGTTCCCGGAGCGAAGCTAGAGCTAGGCGGGGCCTCTGGGGATGGGGGCGGGGCCTGGGGCAGAGGCGGG-TCTGGTCACCGGAGGAGGCGGGGCCTGGAGAG-AAGTTCGGGAAGGGAAAGGGGTTTT--GAGGTCAGGACTGACCTGGTGGAGGGCGAGACTAAGGTCCCGG-----------------------------GCGGGACGT-AACAGCACATGGGGCAG-AGGGTCT--GGGAGCAGCCACAACCAGAGGCGAGTATGGTCTAGGGGCAAGGCCACATCAGGACCCGGCCTC--TGGGCATGGTCGAGGCCCAGGGCAGGGGCAGAAGTAGGGTGAGGGTGTGAGTTCAGAGAGTGGCGGTGCATGGGCACCGTGAGCCTGAGCGCTGGCTGGAGGGGTTCTGGCGCCCAGCCCAGAAATCGATCCTTGGGGGGACCG-TGGCCAGAGGTAGGTGGGGAGTGGG--GGCCTGGCCTGATGGCATGATTGGCAGGCGGAGCTGATCCGAGAAGACGTCCAGGGGGCTCTGCACGACTACCGGTCTGGCCGCGGGGAGCGCAGGCCCGCAGCGCTCAGGTAAGGGCGCTGGGCTGGAAGCAGGGGAGAAGAGAGGCTGGGTGGGGTGTCTGGGAGGCCAGCCTCCCCTCTCTGGGCCT-------------------CCGTCCCCTCTCCTTCGGACAGTGAGCTGATGC-CCCTACCCTAGAACAGCACA--AGTTTTGAAGCCCGCCAA--ACAGCCTGGTTCGAGTCCTG-CCGTACC-CCCAGACATCTGCACCCGATCTCCAAGACCA-CTTTTCCTAATTCTGGTCCTCGGTTTCTCCTCCTTCGGGCCTCAGTTTCCCTCTGGAGAGGTGTTCCC-------------------------CTTCCCCATATCTCCGGTTTTTTCCTCCCCTGG--------GTCTGATTCCGCTGGGCCG-------CA--GTGTCTC-CGTTTTAAGACCGACTTTATCCCCTGCCCTGTCCCCC--GTGGACTCAAGCT--GTCTCCCTTTGTCCCACCACAGGGCCACGCAAGAGGAGTTGCAGCGCCACCCCTCACC i canFam3.chr1 C 0 C 0 a score=1867958.000000 s hg38.chr19_GL949753v2_alt 793427 714 + 796479 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCTAAGGAAGGGGTCTGggggcagggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTC--------TCTGGTCAGACTTCTGCGTTATGGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGAGCCGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTGGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC s panTro4.chr19 59993935 718 + 63644993 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgagaagtggtgagccgcgaaggaaggggtctgggggcgggaccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggCGTTCTCTG----TCTGGTCAGACTTGTGCGTTATAGAAGAGGGGCT-GGGTCGGGGGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGAAGTGTATAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCCCCTC-----------------------------------CTCTGTCCCCTAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACAGGGAACGCGGCCGCAGGACCCGGCGCCGGGCGGCTGGGGGTAAGGGGCATCCTCGCGTGGCATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949164 722 + 60714840 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTGGGCCTCCCCAGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgaaggaacgggtctgggggcggggccaggcgactggaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCCTTATGGAGGAGGGGCT-GGGTCGGGGGCGTGGCTTGG--TTGTGGGGCGTGGCCATGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTTCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTAGAGCACCGGGAACGCGGCCGCAGGACACGGCGCCGGGCGGCTGGGGGTAAGGGGCACCCTCGCGTGGGATCTGAA-CCCCCTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGCTCTCCCCTCC i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103417557 723 - 106955855 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCATCAGTCCGCGCAGTGATCAGCATCTTAGAGCGGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGACGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACTCTGACTCGGCCTCCCCGGAACTGGGTCCCCGGGGTCCCGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGAGGGAAGGGGTCTGggggcggggccaggcgactgaaggcggggctag-ggcgtgga-------------agggcggggccggctgcgggacgggAGTTCTCTGTCAATCTGGTCAGACTTCTGCGTTATGGAGGAGGGGCTGGGGTCGGGAGCGGGGCTTGG--TTGTGGGGCGTGGCCAGGTGTTTGGGGCGTGGCCTGATCTGGGGACGTGTGTAGGTGCTCAGGTTCAGGACTTTGACGGGGAT--GGTTCTGGAACTCGGGACCCCTGAG-------------------------------------------------CGTCCGCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCAAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGAACCCGGCGCCGGGCGGCTGGGGGTAAGGAGCACCCCTGCGTGGTATCTGAA-CCCCTTCCCGATCTCTTCCAAATGTCCCCGCTCTCCCCAGGGTCTCCCCTCC i nomLeu3.chr10 C 0 C 0 s macFas5.chr19 55885154 714 + 59248254 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGCCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGACGCAGAGGCCTGGGCCCGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGCTCTGCAGGCGGAGCGGGAAGTGGTGAGCCGCGCGGGAAAggggctgggggcggggccagacgactggaggcggggctag-ggcgtgg--------------ggGGCGGGGCCAGCTGCGGGATAGGAGTTCTCCGTCAATCTGGTCAGACTTCGGCGTTATGGAGGCGGGGAA-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGGCCTG-TCTGGAGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATGCCCCCCCTCTCCCCAGGGTCTCCCCTCC i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47973666 715 + 51301725 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCAGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGTGAGCCgcgcgggaaaggggctgggggcggggccagatggctggaggcggggctgg-ggcgtgga-------------agggcggggtcagctgcgggATGGGAGTTCTCCGTCAATCTGGTCAGACTTCGGTGTTATGGAggaggggcg-------ggggcggggcttgg--ttgtagggcgtggccaggtgtgtggggcggggcctg-tctggggACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CTTCCccctc-----------------------------------ctctgtcccccaggaCATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGAGGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCATCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAAcccccctcccgatcacttccagatgccccccctctccccagggtctcccctcc i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673087 714 + 50890351 CGCCGCTGAGACCCCGCCCCTGCAGCGCCGTCCGTCCGTCCGCGCAGTGATCAGCACCGTGGAGCGGGGCGCGGGCCGCGGGCGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGGGCCGGCGGGGACCTCGAACAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAggcggagcgggaagtggtgagccgcgcggggaaggggctgggggcggggccagacgactggaggcggggctag-ggcgtgga-------------agggcggggcCAGCTGCGGGATGGGAGTTCTCCGTCAATCTGGCCAGATTTCTGCGTTATGGAGGCGGGGCG-------GGGGCGGGGCTTGG--TTGTAGGGCGTGGCCAGGTGTTTGGGGCGGGTCCTG-TCTGGGGACGTGTCTAGGTGCTCAGGTTCAGGGCTTCGACGGGGAT--GGTTTTGGAACTCGGGAGCCCTGAG-------------------------------------------------CGTCCCCCTC-----------------------------------CTCTGTCCCCCAGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTCGTATCGACGCTGCAGAAGTCGGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGAGCGGCTGGGGGTAAGG-GCACCCCCGCGTGGGATCTGAACCCCCCTCCCGATCACTTCCAGATG-CCCCCGTCTCCCCAGGGTCTCCCCTCC i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 81699 709 + 138250 CGCCGCGGAGACCCCGCCCCTGCAGCGCCGCCCGTCTGTTCGCGCAGTGATCAACCCCGTGGAGCGGGGCACGGACCGCGGGCGTCTCCAGGCGGAGCCCATTCCCGAGGTGGAGGAGGCGCAGAGGCCTGGCCCTGCGGGGACCTCGAGCAGCGCTGACCCGGCCTCCCCGGACCTGGGTCCCCGGGGTCCAGACCTGGCGGGTCTACAGGCGGAGCGGGAAGTGGTGAGCATCGTGGAATGGGATCTGGGGGCGGGGCAAGACGGCTGGAGGCGGGGCTAG-GACGTGGA-------------AGGGCGGGGCCGGCTGCGGGACTTGAGTTCTCTGTCAATCGGATCAGACTTCTGCGTTATGGAGGAGGGGCT-GTGGTAGGGGCGTGGCTTGG--CTGTAGGGCGTGGCCAGCTGTTTGGGGCGTGGTCTG------------GTCTAGGTGCGCAGGTTCAGGGCTTCGATGGAAAT--GGTTGTGGAACTCAGAAGCCC-AAG-------------------------------------------------CGTCCCCCTT-----------------------------------CTCTGTCTCCCAGGACATACTGAATCACGTCTTTGACGACGTGGAGAACTTTGTACAGAAGCTGCAGAAATCAGCGGAGGCGGCCAGGGTGCTGGAGCACCGGGAACGCGGCCGCAGGACCCGGCGCCGGGAGGCTGGGGGTAAGGGACGCCCCCGCCTGAGATCTGAA-CCCCCTCGCGATAACTTCCAAATGTCCCCCATCTCCCCAGCGTCTCCCCTCC i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20154954 763 - 122678785 GGCGGCCGAGACCCCTCCGCTGCAGCGCAGCCCTTCGGTCCGCGCCGTCATCAGCATAGGGGAG------GCGGGCCGGGGGCGACCTCGGGCGGGGCCCATCCCCGAGGTGGAGGAGCCCCAGAGACCCGGGCAGGAAGGAACCTCAGGGAACGCCAACCCAGCCTCCCCGGACCTGGGCCCCCGGGGGCCGGACCTGGCCAGTCTGCAGGCGGAGCGGGACGTGGTGA-------------------GGGGGCGGGGCCAAG-GCATGGAGGCGGGGCCGGCGGTGGGGAGTCCCAGCTTCAGGGGGTGGGGCCTGATGGGGTGTGGGAGT--------------GTCAGACTTC-------TGGGGGTGTGGCT---------GGCGGTGACTGGAATATGAGGACCCGGCCCGCAGCAGAGGGAACGGCCTGGCCTGGGAGGATATCAGGGCCCTT-GGCTGCGGGTTTTGGGGGTGATGCGGGGCCAGGACTCCACATCCCTGAGTCCCCCTGCTCTGACCCGTGCTCTGTCCTCCGGTTCTGTCCTCCGGCTCCgtcccccacactgtcccccacactgtcccccacgctgtcccTCGCCCTGACCCCCAGGACATCCTGAACCACGTGTTCGACGATGTGGAGAGTTTCGTCTCGAAGCTGCAGAAGTCAGCAGAGGCAGCCCGGGTGCTGGAGCACCGGGAGCGTGGCCGCAGGACCCGGCGCCGGGCAGCTGGGGGTGAGAGGCTCCCCAG-GGGGATCCTGAA-----CATCCAGTCCCTCCCAAATATCCTCGCTCTCCCTAGGGTCCCCCCACA i canFam3.chr1 C 0 C 0 e rheMac3.chr19 60727285 697 + 64156825 M a score=7526905.000000 s hg38.chr19_GL949753v2_alt 794141 2329 + 796479 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGC---CCGCCCCTGGGCC-GGGGCGCGGGCACGACGAACCTGTCCcgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGAGTAGGGAGGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCGGATTGAAAGAAAAGg-ggggcttaaaggaatagaggggctaggggctacggggcaggggcggggctacgcgaaggggcggggctTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGCAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTACGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGAATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGCAGGAACGAAGTTGGGGG------CTGTATCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGTCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TGTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCAAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-ggggcgggccggggctgggagagagggaggagcagggtggga-gggggcgggACCCAGACTTctggggctaagggagttgggaatggagacccggattcctgggcctaagggaggaagggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTGAGGGTTAAAAGGATAAGA s panTro4.chr19 59994653 2322 + 63644993 -CGCCACTTGCCAGGGCTGACCTCACCACCAT-----CTTAACCGGGTGTCCAC----CTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCTCCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAACTTGCCCCGTCCCC---GCACCCACGCCAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGACCCTCGGGC-CCCCTTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGGCGGCACAGCCTG-CCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTTAGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGTTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTGGGAGGCAGGG-GGCATGGTGATTGGAGGAGCATAA-GGCG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGGAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACTAGACCAATCGGATTGAAAGAAAAGG-GGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGCGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAATTTTTTTCC--------AGAGAGagagatggatt--------------gggtctcaatattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccacggtgcccggtcTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAATTAATGACAGAACGAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCTGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCGTCCCGGGGGCTCCCGATGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTTTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCTGGGAGAGAGGGAGGAGCagggaggga-gggggtgggacccagacttctggggccaagggaggagggaatggagacccggattcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGATCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTTGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i panTro4.chr19 C 0 C 0 s ponAbe2.chr19 56949886 2325 + 60714840 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCGTCGCCGCGCC--CGTCTGCACCCCTCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCTTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCAAGGGCC-GGGGCGCGGGCACGGCGAACCAGCCCCGTCCCC---GCACCCACGCCAACCACATCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTCTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGACTCG-TGTTCGACTCGTAGAAGGTATGACGGCAC--CCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCGGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCATGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGACGGGGCTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCATAA-GGGG---------------------------------------CTGGGAGGTGGGTGGCATGATGATTGGAAAATAGGACTAGGAGGGAAGGGAAGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAAGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAATGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAGGTTTGGTCTGTAACTTTGGTGATGGGACAGAGTCTATGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATTTGG---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCAAtttttttcc--------agagagagagatggatg--------------gggtctcagtattttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccggtcTAGAAATATAAATTGCTGTT-GAATTGGGCTTAGAGCTACTGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTCGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCTCCGGACGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGTGACACAGCAGGGCCTAGGCTGGGAA-------------------------------------------------GTCC-----GGGGGCGCGGCCGGTACGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGAAAG-GGGGTCCAGGAGGGG-TGCGTCCTGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTCCCT----TCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGTGGGCTGGGGCCGGGAGAGAGGGAGGAGCAGGgagggaggggggagggacctagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAAAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCTAGGGCCTGGGAAGCACTATGTCTGGCTGGGCTCCCTATGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGGATTGGATCTTTGGGTTTTGAAGAAGAGCCCAAATC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGTGCAAGTTTCTGGGAAAGTTAGGAAGTAATAGTATCTCTGGGCCCTCAAGAGGGGTAAAGGCTGGACGATTAAAGTCTTGGTTTTCCAGAGGCTCTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACA-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i ponAbe2.chr19 C 0 C 0 s nomLeu3.chr10 103418280 2326 - 106955855 -CGCCACTTGCCAGGGCTGACCTCACCGCCAT-----CTTAACCGGGTGTCCACCTCTCTCTCTCTGCCTGCCTGGTGCGGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGACCCCCTCAGAGGGCCTGCTGACGCTGCGAGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-AGGGCGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGTAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGCCCTCGGGC-CCCCCTGCAGCGGGAGGAATCG-GGTTCGACTTGTAGAAGGTGTGACGGCACAGCCTGCCCCCTCCTGCTCCCCTGACAGATTGTGAACACGTTGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGGCTAGGAGCCAGGG-GGCGTGGTGATTGGAGGAGCATAAGGGGG---------------------------------------CTGGGAGGTGGGTAGCATGATGATTGGAAAATAGGACTAGGAGGGTAGGGACGGGTTAGAGGCGTGGCTTAGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGGAATTAACGTGAAGGAAAGATTTAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTAGGGTTTAAAGGAATAG-------aggggctacggggcaggggcagggctacgcaaaggggcggggcTTCTGGAAGGTTTGGTCTATAACTTTGGTGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTCCGCAGGGAAAGGGTCAGAACCTGAAACCGACCTTATGGA---AAACCTGATGTGG---AATC--AGGTGAGATTTAGAGACTGGATAAGGCAAtttttttcc--------agagagaaaggtggatg--------------gcgtctcaatatgttgcccaggctggtctggaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccaccgcgcccggcGTAGAAATATAAATTGCTGTT-GAGTTGGGCTTAGAGCTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAGAATCGTTGGGATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAACTAAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTACCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGGGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGA---------------------------------------CCCAAGCGACACAGCAGGGCCAAGCCTGGGAA-------------------------------------------------GTCC-----GGGGGCG-GGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGTAGGGG-TGCGTCCCGGGGGCTCCCGGTGCTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAT-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggacccagacttctggggccaagggaggagggaatggagatcggggttcccgggcctaggggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGTTTTCCCGGGGCCTGGGAAGCACCGTGC----CTGGGCTCCCTGTGAGGACAGAGCCCTGGATATTGGAGGGGGGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAATTTCTGGGAAAGTTAGGAAGTGGTAGTA--CCTGGGTCCCCGAGAGGGGTCAAGGCTGGACGATTAAACTCTTGGTTTTCCAGAGGCTGTAATGC-AATTGTCTAAGTCGCTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i nomLeu3.chr10 C 0 C 0 s rheMac3.chr19 60727982 2367 + 64156825 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGCCAACCATCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGC---ATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAACTCCCCC-AGCCACACGGC----------------ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------GGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctacgggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i rheMac3.chr19 M 697 C 0 s macFas5.chr19 55885868 2368 + 59248254 -CGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTGCCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCAGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA--GGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACTAGGAGGAAAGGGACAGGTTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGAGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGCAATGGGACAGAGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAATTTTTTTTC---CAGAGAGAGAGAGAGATGGATGGGCGTGGG--GGGCgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggccTAGAAATATAAATTACTGTT-GGGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGAGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCTGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTCCCCCAAGCGACACGGCAGGGCCGAGGCTGGGAA-------------------------------------------------CTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagaccggggtttccgggcctaagggaggaaaggggctgggagtGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTGGAGGGGAGAGGCTGGGGAATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACGCTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i macFas5.chr19 C 0 C 0 s papAnu2.chr19 47974381 2365 + 51301725 -cGCCACTTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGtccac--ctctctctctgcctgcctggTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-CCCCGCAGAGGGCCTGCTGACACTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGGCGCGGGCACGGCGAAGCTGCCCCGTCCCC---GCACCCACGACAACCACCTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCGGGC-CCCCCTGCGGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACTGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCgggggggCCCGAGTTAGCGAGCGGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCGGGACTGGGAGGCGGGG-GGCGTGGTGATTGGAGGAGCTTAA-GGGG---------------------------------------CTGGGAGATGAGTGGCATGATGATTGGAAAATGAGACtaggaggaaagggaaaggtTGGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGCGGAAAGGCCAGAAATTAATATGAAGGAAAGATTTAAGACCAGCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAGGAATAG-------AggggctacggggcaggggcggggttacgcgaaggggcggggcTTCTGGAAAGTTTGGTCTATAACTTTGGCGATGGGAC--AGTCTGTGCAC-TGGGGGCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAGCCGAGCTTAAGGA---AAACCTGATTTGG---ACTCAGAGGTGAAATTTAGAGGCTAGATAAggcaattttttttc---c--agagagagagagatggatgggCGTGGG--GGgcgggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatccttcca-------tcttggcctcccaaaatgctgggattacaggcgtgagccactgcacccggcctagaaatataaattactgTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGTGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTTAGTGAAGTTAATGACAGAGCTCAGCTGGGGG------CTGTACCAGGATCCCTGAGCtcttggccctggccctggctgcAGGCTGGAGCTGCCCCCGGAAGAGGGCCCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCACAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGGGAGCAGCCAGCTGCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGTGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTCCCGGGGGCTCCCGGTGTTGACTCCGCcccctttttttctgtgtttttccttctgtcttcctgGCTCTTTTCAGGTGGGTGAGATGGTGAa-ggggcgggccggggccgggagagagggaggagcagggaggga-gggggtgggatccagacttctggggccaagggaggagggaatggagACCGGGGTTTCCGGGCCTAAGGGAGGAAAGGGGCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGT----CTGGGCTCCCTACGAGGACAGAGCCCTGGATATTggaggggagaggctggggaATTCGACCTTTGGGTTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCATAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCGGAGAGGGGTAAAGGCTGGGTGATTAACCTCTTGGTTTTCCAGACACTCAAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i papAnu2.chr19 C 0 C 0 s chlSab2.chr6 47673801 2373 + 50890351 -CGCCACGTACCAGGGCTGACCTCACAGCCAT-----CTTAACCGGGTGTCCAC--CTCTCTCTCTGCCTACCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCGGC-TCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CCGCCCCTGGGCC-GGGACGCGGGCACGGCGAACCTGccccgtcccc---gcacccacgccaaccacctccctccccacgccccaggcccGGCTGCGCGGGAACATCGCCGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTTTTCGGGCCTCTGCAGATGGTGAG---ACCCGCCCCAGGTCCTCCGGC-CCCCGTGCAGCGGGAGGAATCG--GTTCGACTTGCAGACGGTGTGACGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACGTCGGGGGGGCCCGAGTTCGCGAGCAGCGTGCGGCGGCCGCACCTGACGTCGGATGCCGTGGCGCTTCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGCCCCGGGTGAGGGGCAGGACTGGGAGGCGGGG-GGCGTGATGATTGGAGGAGCGTAA-GGGG---------------------------------------CTGGGAGATGGGTGGCCTGATGATTGGAAAATGAGACTAGGAGGGAAGGGACAGGTTAGAGGCGTGGCTTCGTTGTGTTGGGGCGGGG---CTTAGGACAGATGCCAAGATTCAATTGGAGGAAAGGCCAGAAATTAATATGAAGGAAA-ATTTAAGACCAGCAGACCAATCAGATTGAAAGAGAAGGTGGGGCTTAAAGGAATAG-------AGGGGCTACGGGGCAGGGGCGGGGCTACGCGAAGGGGCGGGGCTTCTGGAAAGTTTGGTCTATAACTTTGGAGATGGGACAGAGTCTGTGCAC-TTGGGCCTGGGAGTTTCGTAGGGAAAGGGTCAGAACCTGAAACCGAGCTTAAGGA---AAACCTGATTTGG---AATCAGAGGTGAAATTTAGAGGCTAGATAAGGCAAGTTTTTTCCAGACAGAGAGAGAAAGAGATGGATGGGCGGGGGGTGGGggggtctcaatatgttgcccaggctggtcttgaactcctggcctcaagcgatcctccca-------tcttggcctcccaaaatgctgggattacaggcgtgagccgctgcacccggccTAGAAATATAAGTTACTGTT-GAGTTGGGCTTGGAGGTACCGGCAGGACTTGGTGAAAAGCGGCGGGGCTAG----------ATACAGCGAGCTTTAGGGGAAAACTGAGTTAAGTTAATGACAGAGCTCAGTTGGGGG------CTGTACCAGGATCCCTGAGCTCTTGGCCCTGTCCCTGGCCGCAGGCTGGAGCTGCCCCCGGAAGAGGGACCCCCATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTTACTGACCCGCAGGGCCGCGCTTGGGAAGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGAGGCTGAGGCTTTC--------AGGAGTGCAGCCAGCTCCCCCAAGCGACACAGCAGGGCCGAGGCTGGGAA-------------------------------------------------GTCCGGGGTGGGGGCGGGGCCGGTCCGCCTGGCCCCGCCTGACCCGAC---TCTCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCAGGGCAAG-GGGGTCCAGGAGGGG-TGCTTACCGGGGGCTCCCGGTGTTGACTCCGCCCCCTTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTTTCAGGTGGGTGAGATGGTGAA-GGGGCGGGCCGGGGCCGGGAGAGAGGGAGGAGCagggaggga-gggggcgggatccagacttctggggccaagggaggagggaatggagacccgggttcccgggcctaagggaggaaaggggctgggagtGGGTAGAGTCTGAGAGGTTGGATCTCTGGATCCCCAAAAGGCTGGAAGAAGGCAGTTTGGTTTCTCAGGGCCTGGGAAGCACCATGC----CTGGGCTCCCTAGGAGGACAGAGCCCTGGATATCGGAGGGGAGAGGCTGGGGAATTGGACCTTTGGATTTTGAAGAAGAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTGGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGGGCTTGGGGGCAAGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCCGGGCCCCCGACAGGGGTAAAGGTTGGGTGATTAAACTCTTGGTTTTCCAGACACTCTAATGC-AATTGTCTAAGTCACTGCTGGGTGTCGGACT-----------GGGTTAAAAGGTTTAAGGGTTAAAAGGATAAGA i chlSab2.chr6 C 0 C 0 s calJac3.chr22_GL285922_random 82408 2327 + 138250 -CGCCGATTGCCAGGGCTGACCTCACGGCCAT-----CT--AACGGGTGTCCAC--CTCTCTCTCTGCCTGTCTGGTGCTGGCCCCGCGTCCCCATCGCCGCGCC--CGTCTGCCGCCCGCAGAGGGCCTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGT---CTgcccccgggccgggggcgcggACACCGCGAACCTGGCCGGTCCCC---GCACCCACGCCAACCACGTCCCTCCCCACGCCCCAGGCCCGGCTGCGCGGCAACATCGCAGACCCCTCCTCCCCGGAGCTGCTGCACTTCCTGTTCGGGCCTCTGCAGATGGTGAG---ACCCGCGCCAGGCCCTCGGGC-TCCCCTGCAGCGGGAGGACTCG-GTTTCGACGTGCAGAAGGTGTGATGGCACGGCCTGCCCCCTCCCGCTCCCCTGACAGATTGTGAACACATCGGGGGGTCCCGAGTTCGCGAGCCGCGTGCGGCGACCGCACCTGACGTCGGAGGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGATCTCGCTGGGGGACTCGTGGACCCGCCCTGGGTGAGGGGCGGGACTGGGAGGCAGGG-GGCGTGGTGATTGGAGGAGCAGAA-GGGGCGGGAGATAGGGGCATGGTGATCCGAGGAGCAGAAGGCACTGGGAGATG-GTGCCATGATGATTGGAAAATGGGACTAGGAGGGAAGGGAAGGGCTAGAGGCGTCGCTTCGTTGAGTAGGGGGGGGGGGTCTTAGGACAAATGTCAAGATTCAATTAGAGGAAAGGCCAGAAATTAACGTGAAGA-------CAAGACCACCAGACCAATCAGATTGAAAGAAAAGGTGGGGCTTAAAAGAACAG-------AGGGGCTACGGGGCACGGACGGGGT--------------------------------ATCTGGAACTTTGGCGATGGGACAGAGTCTCTGCGC-TG-AGTCTGGGAGTTTCGTAGGGAAAGGAGCAGAACATGAATCCGAGCTTAAGGA---AAACCTGATTTGT---AATC--AGGTGAGATTTAGAGGCTGGATAAGGCCAttttttttt---t----ccagatagagacg------------------gagtcccgattccttgcccaggctggtctcgaactcctggtctcaagcgatcctcccatcttggctcttggcctcccaaactgctgggactatagacgtgagccaccgctcccgaccTGGCAGCATAAATTGCTGTT-GAGTTGGGCTTAGCGGTACCGGCGGGACTTGGTGAAAAGGGGCTGAGCTAGAATCTTTGGGATGCAGCGAGCTTTAGGGGAAAAC--AGTGAAGTTAATGACAGAGCTAAGCTGGGGGTTAGCTCTGTACCAGGATTCCTGAGCTCTCGGTCCTCTCCCTGGCCGCAGGCTGGAGCTGCCCCCTGAAGAGGGACCTCCGTACAGACCCGAGTTCTACAGCGGCTGGGAGCCGCCGGCCATTGACCCGCAGGGCCGCCCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGCCAGGTGAGGCTGAGGATTCT--------AGGAGAGCAGCAAGCTCCCCCAAACGACCCAGCAGGGCAGAGGCCGGGAA-------------------------------------------------GTCC-----AGGGGCTTGGCTGATCCACCAGGCCTTGCCTCACCCAAC-----TCTTACTTCCTGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTC--CGCCCCAGGGCGAGGCAA--GGGGTCCAGGAGGGG-TACGCCCCGGGGGCTCCCGGTGCTGACTCTGCCCCCCTTTTTTCTGTGTTTTTCCTTCTGTCTTCCTGGCTCTTCTCAGGTGGGTGAGATGGTGAC--GGGCGGGCCGGGGC-GGGAGATGGGGAGGAGCagggaggga-gggggcaggacccagatttctggggccaagggaggagggagtggaggcccgggttcccgggcctaagggagaaaaggggctgggagtGGGTAATGTCTGAGA-GTTGGATCCCTGGATCCCC-AAAGGCTGGAAGAAGGCAGTTTGGTTTCCCTGGGCCTGGGAAGCTCCGTCC----CTGGG-TCCCTGTGAGGACAGAGCCCTGGATATTGAAGGACAGAGGCTGGGGAATTGGACCTTTGGGTTTTGAAGAATAGCCCAAGTC------------------TGGTGCTTGGG-----------------ATCCTAGAGACCCAGAGGAGCAGGCTTGGGA----------CTTCAAGAGCTTGGGGGCAAGTTTCT-GGAAAGTTAGGAAGTGGTGGTATCTCTGGGCCCCTGAGAGAGGTAAAGGCTGGACAGTTACACTCTTGG-----------------------TTGTCTGGGTTTCTGCTGGGTGTCAGACT-----------GGG----ACGCGTTAAGGGTT---AGGATACGG i calJac3.chr22_GL285922_random C 0 C 0 s canFam3.chr1 20155717 2082 - 122678785 CACCCCCTTGCCAGCTCTGACTCCCCATCCCTGGGGACCTCACTGGG------C----CTCTGTCTGTCTGACTGGCGCTGTCTCTGTGTCCCCAACACTGCACCTGCGTCCCTTACCTGCAGAGGGTCTCCTGACCCTGCGGGCCAAGCCGCCCTCAGAGGCCGAGTACACTGACGTGCTTCAGAAAATCAAGTACGCCTTCAGCCTGCTGGTGAGAATGCGTGGGGTGCGGCCAGCGT-GGGGCGGGGGCGTAGCAAGCCTGACCCGTCTTCCATGCACTCAGTAAGGCCAGCACCTCCCCGGCTCCACAGGCCAGACTGCGTGGAAACATCGCCAACCCTTCCTCCCCAGAGCTGCTGCATTTCCTGTTCGGACCTCTGCAATTGGTGAGCCACCCCTCCCTCAGCCCTCCGGTGGCCCCTGCAGTAGGAGGAATTGAGGTTTGACCT-TGGGGGGCTTGATGGGG-----TGTCCACTCCTGCACCCCTGGCAGATTGTGGACACATCGGGCGGCCCCCGATTTGCAAGTGACGTGCAGCGGCCGCACCTGACGTCTGAGGCGGTGGCACTGCTGCGGGACAACCTCACCCCCCGTGAAAATGCCCTCTGGACCTCGCTGGGGGACTCATGGACCCGCCCGGGGTGAGGGG-----CTGGCAGGCAGGGAAGGGTAGCCACTGG----GCTTAG--------------------------------------------CTAGAGGGTACAACCCCAAGCAATTGAAGAA------------------------------------------------------------GCTAGGGTGACTGCTAGGATGCCACTGGAG---AGACGAGTAGACGGTGTGGAGGAGAGGTT-----------------TCAGACTGGAAAGAAAGGCTGGCCTTAGA-----AA-------AGGGGGTGCAGCCTAGGA-------------------------------AAAGACTGG-CTGTGGATTGGGGAAGGGGGTGGAG---ATACGCTTGCAGGCTGCGAGCCTC-CAGGGATATGAGCAGAGCC--AGACTTAGCAGAAGGAGGCAGGATGGGTGTGGAAAAATC--AGAGGTGATTCAGAGGCTGGACACAGCA--------TT--------AGAGCAAAA---------------------------TCAGTATATT------------------------------------------------------------------------------------------------------TACAAATAT-AGTTGATGTCAGGGTGGAACTTAGAG---------GGGCTTGGCAAAAAGCAGAGAGGCCAG----------AAGCACCTAGCCTAGGGG------CTGGGGAAGTGAAGGTGGTACTGGGGCCTGGGG------CAG-ACTGGCATCCCTGAGCCCTCGGCC----CCTCGGCTGCAGACTGGAGCTGTCCCCCAAGGAGGGACCTCCATACAGCCCTGAGTTCTCCAGCGGCTGGGAGCCCCCTGCCACCGACCCACACGGCCGCGCCTGGGAGGACCCGGTAGAGAAACAGCTACAGCATGAGCGGCAACGCCAGCAGGTGAGGCTAGAGCTTCTCTTCCCCGGGAGGAACAAACTCCTCCCCCAGGTAACACAGTGGGGCTGGGACCAGGAA-------------------------------------------------GTCT--------------------------GGCCCTGCCTGAGCTGCTGCTGCTCTCATCTCCTGCAGCAAAGTGCCCCCCAGGTCGCTGTCAATGGGTGAGTGTCGGGGCCCCA-GGTGGGACAGGTGGGGTCGAGGAGGGGATGCGTCCTGGGGGCTCCTGGCGCTGACTCCACTCCTTTTTTC----TGTCTTTCCTTCTGGCTTCCCGGCTCTTCCCAGGTGGGTGAGGTGGTGACCAGTGAGGGCTgggggctgg-gagaggggggaggggggagggg-ggaggggg-------------------aagggggCAG--------GACCCAGACTTGGGGGTCTGAGGGAGGAA-GGGGCTGGGAGTGGGTAAAGTCTGAGA------------------------GGCTGGGAGAAGGCAGTTTGAGTTCCCATGGCCAGGAAAGCTCCCTGT----GTGGG-TCTTTAAGAGGACAGAGCCCCAGAAGTTAGAGGGAAGAGACTGGGGGCTTGGGCATTTAGGTTTTGAGGTAGAGCTCAAAACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGTTACCACCTAGGTAACTCTAGGTGGTACTTTGGGGACTTACTGAGCCTTCAAGAGCCAAGGGACAAGTTTCTGGGAAAGTTGGGAAGAGATAGTATTTCTGGGACCCTGAAAGAGGTAACGACTGGG-GGCTGGACCCTTACTATCCCA-AGGCTCTAAAGCAAACTATCTCAATTCCTGCTGAGTGTGATACTGATAGCCTTCAGAGATTAAAGGTTTGGGAAATGATGGCTTGAGA i canFam3.chr1 C 0 N 0 a score=30456.000000 s hg38.chr19_GL949753v2_alt 796470 9 + 796479 TTGAAGCTT s panTro4.chr19 59996975 9 + 63644993 TTGAAGCTT i panTro4.chr19 C 0 N 0 s ponAbe2.chr19 56952211 9 + 60714840 TTGAAGCTT i ponAbe2.chr19 C 0 N 0 s nomLeu3.chr10 103420606 9 - 106955855 TTGAAGCTT i nomLeu3.chr10 C 0 N 0 s rheMac3.chr19 60730349 9 + 64156825 TTGAAGCTT i rheMac3.chr19 C 0 N 0 s macFas5.chr19 55888236 9 + 59248254 TTGAAGCTT i macFas5.chr19 C 0 N 0 s papAnu2.chr19 47976746 9 + 51301725 TTGAAGCTT i papAnu2.chr19 C 0 N 0 s chlSab2.chr6 47676174 9 + 50890351 TTGAAGCTT i chlSab2.chr6 C 0 N 0 s calJac3.chr22_GL285922_random 84735 9 + 138250 TTGAAGCTT i calJac3.chr22_GL285922_random C 0 N 0