##maf version=1 scoring=roast.v3.3 a score=2047.000000 s hg38.chr1_KI270760v1_alt 0 5 + 109528 ccagc s panTro4.chr1 30430885 5 + 228333871 ccagt i panTro4.chr1 N 0 C 0 s macFas5.chr1 29827579 5 - 227556264 ccggt i macFas5.chr1 N 0 C 0 s papAnu2.chr1 32593574 5 + 220367699 CCGGT i papAnu2.chr1 N 0 C 0 a score=363987.000000 s hg38.chr1_KI270760v1_alt 5 266 + 109528 cagaataccaca-tgcatttagctgttctgtctccttaggctcctcttgactgtaacagtttct----------------ttgatcaccttgacagttttgaggactgcttgtcaagtacatagttggatggccctcttggagtttttctgatgtttttctcatcagttagactggaggctaggtttgaaggaagaagatcacggatgtaaagttccactcacatcatatcaaggctacagactatcaacatgattgatgattattgatgctgaccttagtct s panTro4.chr1 30430890 282 + 228333871 cagaataccaca-tgcatttagctgttctgtctccttaggctcctcttaactgtaacagtttctcaggttctccttggctttgatcaccttgacagttttgaggactgcttgtcaagtgcatagttggatggccctcttggagtttttctgatgtttttctcatcagttagactggaggctaggtttgagggaagaagatcacggatgtaaagttccactcacatcatatcaaggctacagactatcaacatgattgatgattattgatgctgaccttcgtcc i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33316495 283 + 229590362 cagaataccacattgcatttagctgttctgtctccttaagctcctcttggctgtaacagtttctcaggctttccatggttttgatcaccttgacagttttgaggactactggtcaagtacatagttggatggccctcttggagtttttctgatgtttttctcatcagttagactggagggtaggtttgagggaagaagatcacagatgtaaagttccactcacatcatatcaaggctacagactatcaacatgattgatgattattgatgttgaccttcatgc i rheMac3.chr1 N 0 C 0 s macFas5.chr1 29827584 283 - 227556264 cagaataccacattgcatttagctgttctgtctccttaagctcctcttggctgtaacagtttctcaggctttccgtggttttgatcaccttgacagttttgaggactactggtcaagtacatagttggatggccctcttggagtttttctgatgtttttctcatcagttagactggagggtaggtttgagggaagaagatcacagatgtaaagttccactcacatcatatcaaggctacagactatcaacatgattgatgattattgatgttgaccttcatgc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32593579 283 + 220367699 CAgaataccacattgcatttagctgTTCTGTCTCCGTAAGCTCCTCTTGGCTGTAACAGTTTCTCAGGCTTTCCGTGGTTTTGAtcaccttgacagttttgaggactACTGGTCAAGTACATAGTTGGATGGCCCTCTTggagtttttctgatgtttttctcgTCAGTTAGACTGGAGGATAGGTTTGAGGGAAGAAGATCACAGATGTAAAGTTCCACTCACATCATATCAAGGCTACAGACTATCAACATGATTGATGATTATTGATGTTGACCTTCATGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28108821 283 - 130588469 cagaataccacattgcatttagctgttctgtctccttaggctcctcttggctgtaacagtttctcaggctttccgtggttttgatcaccttgacagttttgaggactactggtcaagtacatagttggatggccctcttggagtttttctgatgtttttctcatcagttagactggaggatagggttgagggaagaagatcacagaggtaaagttccactcacatcatatcaaggctacagactatcaacatgattgatgattattgatgttgaccttcatgc i chlSab2.chr20 N 0 C 0 a score=1392871.000000 s hg38.chr1_KI270760v1_alt 271 797 + 109528 cctggctgaagtcatgtttctcaggtttctccactgtaaagttactc-ttttgctcctcttttccatactgtagtctctggaaggaagtcattatgagtagtccacatttaaggagtggggagttatgctccatcgttgaggggaagagtatctacataaattattgggaattcttctttacaataaatttgcctcttctccacaatttagtaatttattcaatca----tttatatcagcatggacttatggatatttattttattttggtggttataatccaatatgattatttattttgttgctcaatttgttcaagttttggccatcttttgctgtagat-------tagcatatttattatagttatttcaaagtcattgtctgctaatttcaacatctttgtcatctgtggctctttttcactggctgatttttttcttgactataggtcacattttcctgtttcttcacctgtctagccattttttattgtatgctggac---tttttttttt-aattttgagatggagtttcactcttgttgcccaggctggagtacaatggcacgatctcggctcaccacaacctccacctcccaggttcaagtgattctcctatctcaacctcccaagtagctgggattacaggcacctgccacaacgcctggctaattttttgtatttttagtagagagggggtttcaatgtgttgaccaggtgggtctcgaactcctgacctcaggtgatccacctgccttggccttccaaagtgctgggattacaggcgtgagccaccatgcccagccca s panTro4.chr1 30431172 798 + 228333871 cctggctgaagtcatgtttctcaggtttctccactgtaaagttactc-ttttgctcctcttttccatactgtattctctggaaggaagtcattatgagtagtccacatttaaggagtggggagttatgctccatcgttgaggggaagagtatctacataaattattgggaattcttctttacaataaatttgcctcttctccacaatttagtaatttattcaatcacttatttatatcagcatggacttatggatatttattttattttggtggttataatccaatatgattattt----tgttgctcaatttgttcaagttttggccatCTTTTGCTGTAGGC-------Tagcatatttattatagttatttcaaagtcattgtctgctaatttcaacatctttgtcatctgtggctctttttcactggctgatttttttcttgactataggtcacattttcctgtttcttcacctgtctagtcattttttattgtatgctggaca--tttttttttt-aattttgagatggagtttcactcttgttgcccaggctgcagtacaatggcacggtcttggctcaccgcaacttccacctcccaggttcaagtgattctcctatctcagcctcccaagtagctgggattacaggcacctgccacaacgcctggctaattttttgtatttttagtagagagggggtttcaatgtgttgaccaggtgggtctcgaactcctgacctcaggtgatccacctgcgttggccttccaaagtgctgggattacaggcgtaagcgaccgtgcccagccca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30019628 804 - 229942017 cctggctgaagttatgtttctcaggtttctccactgtaaagaaacacggtttgctcctcttttccatactgtactctctggaaggaagaaattttgagtagtccacatttaaggagtggggagttatgctccatccttgaggggaagagtgtctactttaaatagtgggaattcttctttacaataaatttgcctcttctccacagtttagtaatttactcaatcacttatttatatcagcatcgacttatggatatttattttattttggtggttataatccaatatgattatttattttgttgctcaatttgttcaagttttggccatCTTTTGCTGTAGGC-------TATcatatttattatagttatttcaaagtcattgtctgctaatttcaacatcttagtcatctgtggctctttttcattggctgatttttttcttgactataggtcacattttcctatttcttcacctgtctagtcattttttattgtatgctggaca--ttttttttttaaattttgagatggagtttcactcttgttgcccaggctagagtacaatggcaggatctcggctcaccgcaacctccacctcccaggttcaagtgattctcctgcctcggcctcccaagtagctgggattacaggcacctgccacaacacctggctaattttttgtgtttttagtggagagggggtttcaatatgttggccaggtgggtctctaactcctgacctcaggtgatccacctgcctcggccttctgaagtgctgggattacaggcgtgagccaccgtgcccagccca i ponAbe2.chr1 N 0 C 0 s rheMac3.chr1 33316778 802 + 229590362 cctggctgaagtcatgtttctcaggtttctccactgtaaagttactc-ttttg---ctcttttccatactgtactctctggaaggaagtcactatgagtagtccacatttaaggagtggggagttatgctccatccttgaggggaagaatatctacaaatattatttggaattcttctttacaagacattcgcctcttctccacaatttagtagtttattcattcacttatttatatcagtatggactcatggatatttattttattttggtggttataatccaatatgactatttattttgttgctcaagttgttcaagtttgggccatCTTTTGCTGTAGGCAAATTTATTatatatttattatagttatttcaaagttattgtctgctaatttcaacatcttggtcatctgtggtcctttttctttggctgatttttttcttgactacaggtcacgttttcctgcttcttcacctgtctagtcattttttattttatgctggaca-ttttttttttt-aattttgggatggagtttcactcttgttgcccaggctggagtgcaatggcatgatctcagttcactgcaacctccacctcccaggttcaagtggttctcctgcctcagcctcccaagtagctgggattacaggcacctgccacaatgcctggctaattttttgtatttttagtcgagatggggcttcaatgtgttggccaggtgggtctcgaactcctgacctcaggcgatccacctgcatcggccttccaaagtgctggg-----tggcataagccaccgcgcccggcccg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29827867 802 - 227556264 cctggctgaagtcatgtttctcaggtttctccactgtaaagttactc-ttttg---ctcttttccatactgtactctctggaaggaagtcactatgagtagtccacatttaaggagtggggagttatgctccatccttgaggggaagaatatctacaaatattatttggaattcttctttacaagacattcgcctcttctccacaatttagtaatttattcaatcacttatttatatcagtatggactcatggatatttattttattttggtggttataatccaatatgactatttattttgttgctcaagttgttcaagtttgggccatCTTTTGCTGTAGGCAAATTTATTatatatttattatagttatttcaaagttattgtctgctaatttcaacatcttggtcatctgtggtcctttttctttggctgatttttttcttgactacaggtcacattttcctgcttcttcacctgtctagtcattttttattttatgctggaca-ttttttttttt-aattttgggatggagtttcactcttgttgcccaggctggagtgcaatggcacgatctcagttcactgcaacctccacctcccaggttcaagtggttctcctgcctcagcctcccaagtagctgggattacaggcacctgccacaatgcctggctaattttttgtatttttagtcgagatggggtttcaatgtgttggccaggtgggtctcgaactcctgacctcaggcgatccacctgcatcggccttccaaagtgctggg-----tggcataagccaccgcgcccggcccg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32593862 801 + 220367699 CCTGGCTGAAGTCATGTTtctcaggtttctccactgtaaagttactc-ttttg---cTCTTTTCCATACTGTACTCtctggaaggaagtcactatgagTAGTCCACATTTAAGGAGTGGGGAGTTATGCTCCATCCTTGAGGGGAAGAATATCTACaaatattatttggaattcttctttACAAGACATTCGCCTCTTCTCCACAATTTAGTAATTTATTCAATcacttatttatatcagtatggactcatggatatttattttattttggtggttataatccaatatgactatttattttgttgctcaagttGTTCAAGTTTGGGCCATCTTTAGCTGTAGgcaaatttattatatatttattatagttaTTTCAAAGTCATTGTCTGCTAATTTCAACATCTTGGTCATCTGTGGTTCTTTTTCtttggctgatttttttcttgactataggtcacattttcctgcttcttcacCTGTctagtcattttttattttatgctggaca--tttttttttt-aattttgggatggagtttcactcttgttgcccaggctggagtgcaatggcacgatctcacttcactgcaacctccacctcccaggttcaagtggttctcctgcctcagcctcccaagtagctgggattacaggcacctgccacaatgcctggctaattttttgtatttttagtcgagatggggtttcaatgtgttggccaggtgggtctcgaactcctgacctcaggcaatccacctgcatcggccttccaaagtgctggg-----tggcataagccaccaggcccggcccg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28109104 796 - 130588469 cctggctaaagtcatgtttctcaggtttctccactgtaaagttactc-ttttg---ctcttttccatactgtactgtctggaaggaagtcactatgagtagtccacatttaaggagtgggaagttatgctccatccttgaggggaagaatatctacaaaaattatttggaattcttctttacaagacattcgcctcttctccacaatttagtaatttattcaatcacttatttatatcagtatggactcatggatatttattttattttggtggttataatccaatatgactatttattttgttgctcaagttgttcaagttttggccatCTTTTGCTGTAGGC-------Tagcatatttattatagttatttccaagtcattgtctgctaatttcaacatcttggtcatctgtggttctttttctttggttgatttttttcttgactacaggtcacattttcctgtttcttcacctgtctagtcattttttattttatgctggacatttttttctttt-aattttgagatggagtttcactcttgttgcccaggctggagtgcaatggcatgatctcagttcactgcaacctccacctcccaggttcaagtgcttctcctgcctcagcctcccaagtagctgggattacaggcacctgccacaacgcctggctaagtttttgtatttttagtcgagatggggtttcaatgtgttggtcaggtgggtctcgaactcctgacctcaggtgatccacctgcatcagccttccaaagtgctggg-----tggcatgagccactgcacccggcccg i chlSab2.chr20 C 0 C 0 a score=323543.000000 s hg38.chr1_KI270760v1_alt 1068 141 + 109528 acattttgatgatactctctagagacttggttttattatctccctgaagagtaataacaatttttttggccagtggttaaattattattagataacctttaacttttggattcctgactttatgctttgtttggtggaaAG s panTro4.chr1 30431970 141 + 228333871 acattttgatgatactttctagagacttggttttattatctccctgaagAGTAATAACAATTTTTTTGGCCAGTGGTTAAATTATTATTAGATAACCTTTAACTTTTGGATTCTTGACTTTATGCTTTGTTTGGTGGAAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30020432 141 - 229942017 acattttgatgatactctctagagacttggttttattatctccctgaagagtaataatAATAGTTTTGGCCAGTGGTTACATTATTATTAGATAAACTTTAACTTTTAGATTCCTGACTTTATGCTTTGTTTGGTGGAAAC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33317580 140 + 229590362 acattttgatgatactctctagagacttggttttattatctctctgaagagtAA-AACAATTGTTTTGGCCAGTGGTTACATTACTTTTAGATAACTTTTAACTTTTGGATTCCTGGCGTTATGCTTTGCTTGGTGGAAAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29828669 140 - 227556264 acattttgatgatactctctagagacttggttttattatctctctgaagAGTAA-AACAATTGTTTTGGCCAGTGGTTACATTACTTTTAGATAACTTTTAACTTTTGGATTCCTGGCGTTATGCTTTGTTTGGTGGAAAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32594663 140 + 220367699 ACATTTTGATGATACTCTCTAGAGACTTGGTTTTATTATCTCTCTGAAGAGTAA-AACAATTGTTTTGGCCAGTGGTTACATTACTTTTAGATAACTTTTAACTTTTGGATTCCTGGCGTTATGCTTTGTTTGGTGGAAAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28109900 140 - 130588469 acattttgatgatactctctagagacttggttttattatctctctgaagAGTAA-AACAATTGTTTTGGCCAGTGGTTACATTACTATTAGATAACTTTTAACTTTTGGATTCCTGGCGTTATGCTTTGTTTGGTGGAAAA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64562727 141 + 155834243 atgttttgatgatattttctagagacttggttttaatatctccctgaagagtAACAACAATTGTTTTGGCCAGTGGTTACATTATTATTAGATAACCTTTAACCTTTATATTCCTGGCTTTATGCTTTGTTTGGTGGAAAG i calJac3.chr7 N 0 C 0 a score=407978.000000 s hg38.chr1_KI270760v1_alt 1209 152 + 109528 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATAATTCTATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTATTGCCATGCCCTCACACTTTGTAGAATTCTGAATCCACATTCTGTCTCCCTGGA-----------------------ttgggt s panTro4.chr1 30432111 152 + 228333871 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATAATTCTATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTATTGCCATGCCCTCACACTTTGTAGAATTCTGGATCCACATTCTGTCTCCCTGGA-----------------------TTGGGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30020573 151 - 229942017 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATCCTTCTATTATAAGATGTAGTCTTTACTTAT-ATGTGTTGCCATTctggggatttattgccatgccctcacactttgtagaattctgaatccaaattctgtctccctgga-----------------------ttgggt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33317720 152 + 229590362 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATCCTTCCATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTGTTGCCATGCCCTCACACTTTgtagaattctgaatccaaattctgtctccctgga-----------------------ttgggt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29828809 152 - 227556264 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATCCTTCCATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTGTTGCCATGCCCTCACACTTTGTAGAATTCTGAATCCAAATTCTGTCTCCCTGGA-----------------------TTGGGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32594803 152 + 220367699 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATCCTTCTATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTGTTGCCATGCCCTCACACTTTGTAGAATTCTGAATCCAAATTCTGTCTCCCTGGG-----------------------TTGGGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28110040 152 - 130588469 CTCTATTTCAGG-TTTATTCCTGATCTAAAAATGAATCCTTCTATTATAAGATGTAGTCTTTACTTCTAATGTGTTGCCATTCTGGGGATTTGTTGCCATGCCCTCACACTTTGTAGAATTCTGAATCCAAATTCTGTCTCCCTGGA-----------------------TTGGGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64562868 153 + 155834243 CTCTATTTCAGGTTTTTTTCCTGATCTAAAAATGAATCCCTCTATTATAAGATGTAGTCTTTACTTCTAATGTGTGGCCATTCTGGAGATTTATTACCATAATGTCACACTTTGAAGAACTCTGAATTCAAATTCTTACTCCCTGCA-----------------------TTGGGT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14960359 173 - 85426708 CCTTATTTCA---TTTGTTGCTGATCTAAGGATGAATCCTCCTATCATGAGATGTAGTCTTTACTCCTAATGCATGACTTTTCTGGGAACTTATTAGAATCCCATCACTCAGAAccgaagtcagactccaaattgtgtttctcttgcactgagcagctattgtttctcatttgggt i canFam3.chr2 N 0 I 133 a score=750014.000000 s hg38.chr1_KI270760v1_alt 1361 289 + 109528 ggattctgaaatctttgctcagcaattcc----------atctttccagctgttgctctccc-tttgggttctttaaagtcttgcctgcacatgtcagttcaagaggtatccaaatatctgaagggagtttatatacagaatttggagatgtctctctgtgg-ccctcctttctggaattg---tccttaatctccagccatttagcagtcccatactctgtcctc-tgact-cttcaaaccactcagaat------gcagctttc-tttatgaacagtagagggactcaccctcagaggaaaaaataactaa s panTro4.chr1 30432263 289 + 228333871 GGATTCTGAAATCTTTGCTCAGCAATTCC----------ATCTTTCCAGCTGTTGCTCTCCC-TTtgggttctttaaagtcttgcctgcacatgtcagttcaagaggtatccaaatatctgaagggagtttatatacagaatttggagatgtctctctgtgg-ccctcctttctggaattg---tccttaatctccagccatttagcagtcccatactctgtcctc-tgact-cttcaaaccactcagaat------gcagctttc-tttatgaacagtagagggactcaccctcagaggaaaaaataactaa i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30020724 290 - 229942017 ggattctgaaatctctgctcagcaattcc----------atctttccagccactgctctcCC-TTtgggttctttaaagtcttgcctgtacatatcagttcaagaggtatccaaggatctgcagggagtttatatacagaatttggagatgtctgtctgtggcccctcctttctggaattg---tccttaatctccagccatttagcagtcccttactctgtcctc-tgact-cttcaaatcactcagaat------gcagctttc-ttcatgaacagtagagggactcactctcagaggaaaaaataactaa i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33317872 287 + 229590362 ggattctgaaatctctgctcagcgattcc----------acctttgcagccgttgctctccc-tttgggttctttcaagtcttgcctgcacatgtcagttcaagaggtatccaaggatccgaagggagtttatatacagaatttggagatgtctctctgtggcccctcctttctagaattg---tccttaatctccagccatttagcagccccgtactctgtcctcttgact-cttcaaatcactcagaat------gcagctttc-ttcatgaacagcagagggactcaccctcagaggaaaaaa----taa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29828961 286 - 227556264 GGATTCTGAAATCTCTGCTCAGCGATTCC----------ACCTTTGCAGCCGTTGCTCTCCC-TTtgggttctttcaagtcttgcctgcacatgtcagttcaagaggtatccaaggatccgaagggagtttatatacagaatttggagatgtctctctgtggcccctcctttctagaattg---tccttaatctccagccatttagcagccccgtactctgtcctc-tgact-cttcaaatcactcagaat------gcagctttc-ttcatgaacagcagagggactcaccctcagaggaaaaaa----taa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32594955 286 + 220367699 GGATTCTGAAATCTCTGCTCAGCGATTCC----------ACCTTTGCAGCCGTTGCTCTCCC-TTTGGGTTCTTTCAAGTCTTGCCTGCACATGTCAGTTCAAGAGGTATCCAAGGATCTGAAGGGAGTTTACATACAGAATTTAGAGATGTCTGTCTGTGGCCCCTCCTTTCTAGAATTG---TCCTTAATCTCCAGCCATTTAGCAGCCCCGTACTCTGTCCTC-TGACT-CTTCAAATCACTCAGAAT------GCAGCTTTC-TTCATGAACAGCAGAGGGACTCACCCTCAGAGGAAAAAA----TAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28110192 286 - 130588469 GGATTCTGAAATCTCTGCTCAGCGATTCC----------ATCTTTCCAGCCGTTGCTCTCAC-TTtgggttctttcaagtcttgcctgcacatgtcagttcaagaggtatccaaggatctgaagggagtttatatacagaatttggagatgtctctctgtggcccctcctttctagaattg---tccttaatctccagccatttagcagtcccataccctgcccgc-tgact-cttcaaatcactcagaat------gcagctttc-ttcatgaacagtagagggactcaccctcagaggaaaaaa----taa i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64563021 290 + 155834243 GGATTctgaaatctctgttcagcaattcc----------atctttccagctgttgttttccc-tttggtttctttaaagtcttgcctgtgcatgtcagttcaagaggtacccaaggatctgaagggagtttatatacagaatttgcagatgcctctctgtggcccctgcttcctggaattg---tccttaatctccagccattcagcagtaccatactctgtcctc-tgact-ctctgaatcactcagaat------gcagctttC-TTCATAAACAGTAGAGAGACTCACCCTCAGAGGAAAAAATAACTCA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14960665 296 - 85426708 ggactccagaatcacacctgggcaggtgcttaacttctgagccatgcaggcatccccctctcatttgggttcttaaaagtcttgcctgtccatgcaagttcaag-----------gatttaaagggagtttatgcacagaattgggaaattttactctatgg-ccatcctttctgagattttgctcctcaacttccagcctcttagcaggcccaaactgcatcttc-taactcctttaaatcatgaagaattttgtcaaagctttctttcatggacagtggggg----tgccctcagaaggaaaataatctaa i canFam3.chr2 I 133 I 392 a score=1091064.000000 s hg38.chr1_KI270760v1_alt 1650 509 + 109528 ggtagttctcacccagtgtgg----------ttctcttctttccaaggccatagcccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaaatagtcttataagtgttttaaaaatattttgtctagagtttataattAGTCCAATATAAACTACTCTGCCAATATCAACATTCATAAGC----TATTTAtttatttttatttattcactttagaaac-aaagtcttattttgtcatccaggctagagtgcagtggtgcaatctgggctccagtgatcttttgcctcatcctcctaagtagctaggataacagccacacaccacaatgtctgacttt-----------------tctttttctttccttcttttttactattttattttattttttatttatttattttttcttggtagaggtgaggtttccctgtgtttcccagggtggtctcaaactcctggcctcaagtgatccctctcacctcagcctctcaaactgctgggattacaggtatgagccactgcac s panTro4.chr1 30432552 509 + 228333871 ggtagttctcacccagtgtgg----------ttctcttctttccaaggccatagcccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaaatagtcttataagtgttttaaaaatattttgtctagagtttataattAGTCCAATTTAAACTACTCTGTCAATATCAACATTCATAAGC----TATTTATTTAtttatatttatttactttagaaac-aaagtcttattttgtcatccaggctagagtgcagtggtgcaatctgggctccagtgatcttttgcctcatcctcctaagtagctaggataacagccacacacgacaatgtctgacttt-----------------tctttttctttccttcttttttactattttattttattttttatttatttattttttcttggtagaggtgaggtttccctgtgtttcccagggtggtctcaaactcctggcctcaagtgatccgtctcacctcagcctctcaaactgctgggattacaggtatgagccactgcac i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30021014 494 - 229942017 ggtagttctcaccccatgtgg----------ttctcttttttccaaggccatagcccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaag-agtcttttaagtgttttaaaaatattttgtctagagtttataattgGTCCAATACAAACTACTCTGCCAATATCAACACTCATAAGC----TATTTATTTAtttatatttatttgctttagaaataaaagtcttattttgtcatccaggctagagtgcagtggtgcaatctgggctcaagtgatcttttgcctcatcctcctaagtagctaggataacaaccacacaccacagtgtctgacttt-----------------tc-ttttccttccttctttttt--------------ttttttttttttttttttttttttggtagatgtgaggcttccctgtgttgcccagggtggtctcaaactcctggccttaagtgatccctctcacctcagcctctcaaactgctgggattacaggtatgagccactgcac i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33318159 505 + 229590362 ggtagttctcaccccgtgtgg----------ttgtcttctttccaagaccatagtccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaat-agtcttttaagtatttttaaaatattttgtctaacgtttataattgGTCCAATACAAACTACTCTGCCAATATCAACATTCATAAGC----TAtttatttatttatatttatttacttcagaaataaaagtcttattttgtcatccagactagagtgcagtggtgcaatctgggcccaagtgatcttttgcctcatcctcgtaagtagctaggataacagccacacaccacagtgtctgacttt-----------------tctttttctttccttctttttt--ttatttttttaattatttattaattta--tttttttggtagaggtgaggtttccctgtgtttcccagggtggtctcaaattcctggcctcaagtgatccctctcacctcaacctctcaaactgctgggattacgggcatgagccaccgcac i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29829247 505 - 227556264 ggtagttctcaccccgtgtgg----------ttgtcttctttccaagaccatagtccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaat-agtcttttaagtatttttaaaatattttgtctaacgtttataattgGTCCAATACAAACTACTCTGCCAATATCAACATTCATAAGC----TAtttatttatttatatttatttacttcagaaataaaagtcttattttgtcatccagactagagtgcagtggtgcaatctgggcccaagtgatcttttgcctcatcctcctaagtagctaggataacagccacacaccacagtgtctgacttt-----------------tctttttctttccttctttttt--ttattttttaaattatttattaattta--tttttttggtagaggtgaggtttccctgtgtttcccagggtggtctcaaattcctggcctcaagtgatccctctcacctcaacctctcaaactgctgggattacaggcatgagccaccgcac i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32595241 506 + 220367699 GGTAGTTCTCACCCCGTGTGG----------TTGTCTTCTTTCCAAGGCCATAGTCCCTAAATTTCTGCTGAGTTTGGGTTGCTCTCCTCTTTCTTCAAAAAAT-agtcttttaagtattttaaaaatattttgtctaatGTTTATAATTGGTCCAATACAAACTACTCTGCCAATATCAACATTCataagc----tatttatttatttatatttatttacttcagaaataaaagtcttattttgtcatccagactagagtgcagtggtgcaatctgggcccaagtgatcttttgcctcatcctcctaagtagctaggataacAGCCACACACCACAAtgtctgacttt-----------------tctttttctttccttctttttt--taattttttaaattatttattaattta-ttttttttggtagaggtgaggtttccctgtgtttcccagggtggtctcaaattcctggcctcaagtgatccttctcacctcaacctctcaaactgctgggattacaggcatgagccaccgcac i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28110478 503 - 130588469 ggtagttctcagcccatgtgg----------ttctcttctttccaaggccatagtccctaaatttctgctgagtttgggttgctctccactttcttcaaaaaac-agtcttttaagtatttttaaaatattttgtctagcgtttataattgGTCCAATACAAACTACTCTGCCAATATCAACATTCATAAGC----TATTTAtttttttatatttatttactttagaaataaaagtcttattttgtcatccagactagagtgcagtggtgcagtctgggcccaagtgatcttttgcctcatcctcctaagtagctagggtaacagccacacaccacaatgtctgactt--------------------cttttcctttctttcttttt--aaattttttaaattgtgtattaattta-ttttttttggtagaggtgaggtttccctgtgtttcccagggtgatctcaaattcctggcctcacgtgatccctctcacctcaacctctcagactgctgggattacaggcatgagccactgcac i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64563311 531 + 155834243 GGTACTTCTCTCCCAGTATGAAGAGAAGTACCtctcttctttccagggcaatagcccctacatttctgctgagtgtgcgttgctctccactttcttcaaaaagt-ggtcttttaagtattttaaaaatattttgtctagagtttataattgGTCCAATGCAAACTACTCTGCCAGTATC-ACACTCATAAGCtatttatttatttatttatatttatttattttagaaac-aaagtcttattttgttacccaggctagagtgcagtggtgcaatctgggctcaagtgatcttttgcttcatcctccttagtagctaggataacagccaaataccaccttgtctttctttctttccttccttctttctttctttctttctttctttttc-tttctttctttcattctttctttctttcttttcttttg------gtgaggttttcttgtgttgcccacagtggtctcaaattcctggcctcaagtgatccttcccatctcagcccttcaaactggtggtatcacaggcatgagtcactgcac i calJac3.chr7 C 0 C 0 e canFam3.chr2 14960961 392 - 85426708 I a score=3152541.000000 s hg38.chr1_KI270760v1_alt 2159 1239 + 109528 ttaaccTGCTTAATATGTAGTTTTGACAGCCAACTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGGTGG----CATCAGCCAGGAGGTTG--CCTGAAGA----GTTGCTGTCCTTCTCTGAGCTTCCATTT----ACTGTAGAAGGGCTAATAATTCTCCCTGTATTGGCTAGTGATGAAAGCTAAGGAACCTGGCATGCAGTAGGTGCTCTCTGAATGAGGCACCGTTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCCACCCAGCTGTCATGGCCTGCACATCAACTCCTGCAGCAAAAATGCAGCACTTCCCTCATCTCTCTCCTGTCTGTCTCTTCTAGCAGTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGGCCACTTGTAGGTGCAtttacaaaactgtgagttctacaagggtaggggtc-ttgtc--tttctcagctctatatgtccagctcctTGAAAAAGAAAATAAATATAATAAGCATTCATCCattcattcatttatctaatactattgagcacctattatattctggtcactgtcctaagtgctgggattcagcactgaacaagagggacaatatcactgctcttcttgacatatttggtggaggagctgggcaatatactaataggtcaaataca-tagtatgccaagatggtaataagagcaattt-aggatataaacacaggagaggggaagacagaaggcaaaaatgaggagagcgtagtattaaataatggagccaggaaagg-tgacattgtgatcaaagactgaaacaaggtgaatgaatgaatgaatcatgcagatatttgggggacgaatattctagtcagagagaacagtccatgccaaggccctgtggtgggggtatgcctgg---------cctacgtgaggaacagt--gagaaggacagtgggg------------tggaacTTTGCGACTCATTTTAAAACCCTCTCTCTCTTTCTCCTGCCTCacacttagagactggtgagaaga-agaggaatcagcag-----acagaagcagaggccagtaaggttggaggaaaacagaaagggcaggttgctccggaaggcaaggaggaaagagtgatcacatgtgtgccagatgaggattgagacttctctgttggatttagcaacaaggaggtcattggtgaccacagcaagggccattttggtgagcagatggggacaccaacctaatagggtgaattcaagagagaagaaggaagacagcag s panTro4.chr1 30433061 1239 + 228333871 ttaaccTGCTTAATATGTAGTTTTGACGGCCAACTTAAATCTATCTGAATTAAGACAAAGTAAAAGTCATATCAATATGATGG----TATCAGCCAGGAGGTTG--CCTGAAGA----GTTGCTGTCCTTCTCTGAGCTTCCATTT----ACTGTAGAAGGGCTAATAATTCTCCCTGTATTGGCTAGTGATGAAAGCTAAGGAACCTGGCATGCAGTAGGTGCTCTCCGAATGAGGCACTATTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCCACCCAGCTGTCATGGCCTGCACATCAACTCCTGCAACAAAAATGCAGCACTTCCCTCATCTCTCTCCTGTCTGTCTCTTCTAGCAGTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGGCCACTTGTAGGTGCAtttacaaaactgtgacttctacaagggtaggggtc-ttgtc--tttctcagctctatatgtccagctcctTAAAAAAGAAAATAAATATAATAAGCATTCATCCattcattcatttatctaatactattgagcacctattttattctggtcactgtcctaagtgctgggattcagcactgaacaagagggacaatatcactgctcttcctgacatatttggtggaggaggtgggcaatatactaataggtcaaataca-tagtatgccaagatggtaataagagcaattt-aggatataaacacaggggaggggaagacagaaggcaaaaatgaggagagcgtagtattaaataatgaagtcaggaaagg-tgacattgtgatcaaagactgaaacaaggtgaatgaatgaatgaatcatgcagatatttgggggacgaatattctagtcagagggaatagtccatgccaaggccctgtggtgggagtatgcctgg---------cctacatgaggaacagt--gagaaggacagtgggg------------tggaacTTTGTGACTCATTTAAAAACCCTCTCTCTGTTTCTCCTGCCTCacacttagagactggtgagaaga-aggggaaccagcag-----acagaagcagaggccagtaaggttggaggaaaagagaaagggcaggttgctctggaaggcaaggaggaaagagtgatcacatgtgtgccagatgaggattgagacttctctgttggatttagcaacaaggaggtcatcggtgaccacagcaagggccattttggtgagcagatggggacaccaacctgatagggtgaattcaagagagaagaaggaagacagcag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30021508 1234 - 229942017 ttaaccTGCTTAATATGTAGTTTTGACAGCCACCTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGATGG----TATCAGCCAGGAGGTTG--CCTGAAGA----GTTGCTGTCCTTCTCTGAGCCTCCATTT----ACTGTAGAAGGGCTAATAATTCTCCCTGTATTGGCTAGTGATGAAAGCTAAGGAAGCTGGCATTCAGTAGGTGCTC------TGAGGCACCATTGGGACTCCCTTCCCTT-TCCACTCAGTAAAGCCACCCAGCTGTCATGGCCTGCACATCAACTCCTGCAGCAAAAATGCAGCACTTCCCTCATCTCTCTCCTGTCTGTCTCTTCTAGCATTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGCCCACTTGTAGGTGCAtttacaaaactgtgagttctacaagggcaggggtc-ttgtc--tttctcagttctatatgtccagctccttgaaaaagaaaataaatataataagcattcaTCCattcattcatttatctaatactattgagcacctattatattctggtcactgtcctaagtgctgggattcagcactgaacaagagggacaatatcactgctcctcctgacatatttggtggaggaggtgggcaatatactaataggtcaaataca-tagtatgccaagatggtaataagagcaatttaaggatataaacacaggggaggggaagacagaaggcaaaaatgaggagagcgtagtattaaataatgaagtcaggaaagg-tgacattgtgatcaaagacagaaacaaggtgaatgaatgaatgaatcatgcagatatttgggggacgaatattctagtcagagggaacagtccatgccaaggccctatggtaggagtatgcctga---------cctacatgaggaacagt--gagaaggacagtgggg------------tggaacTTTGTGACTCATTTTAAAACCCTCTCTCTCTTTCTCCTGCCTCacacttagagactggtgagaaga-agaggaaccagcag-----acagaagcagaggccagtaaggttggaggaaaacagaaagggcaggttactctggaagacaaggaggaaagagtaatcacatgtgtgccagatgaggattgagacttctctgttggatttagcaacaaggaggtcatcagtgactacagcaagggccattttagtgagcagatggggacaccaacctgatagggtgaattcaagagagaagaaggaagagagCAG i ponAbe2.chr1 C 0 M 175 s rheMac3.chr1 33318664 1231 + 229590362 tcgaccTGCTTAATATGTAGTTTTGACAGCCCCCTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGATGG----TGTAAGCCAGGAGTTTG--TCTGAACA----GCTACTGTCcttctctgagcctccattt----actgtagaagggctaataattctccctgtattggctagtggtgaaagctaaGGAACCTGGCATGCAGTAGGTGCTCTCTGAATGAGGCACCATTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCTACCCAAGTGTCATGGCCTGCACATCAACTCCTGCAGCAAAAATGCAGTACTT-CCTCACCTCTCTCCTGACTGTCTCTTCTAGCAGTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGCCCACTTGTAGGTGCAtttacaaaactgtgagttctacaagggtaggggtc-ttgtc--tttctcagctctatatgtccagcgccttgaaaaggaaaataaatataataagcattcaTCCattcattcatttatctaatactattgagcacctattatattctgggcactatcctaagtgctgtgattcagcactgaacaagagggacaatatcactgctcttcctgacatatttggtggaggaggtgggcaatatactaataggtcaaataca-tagtatgcaaagatggtaatgagagcaattt-aggata-aaacacgggggaggggaagac--aaggcaaaaatgaggagagcgtagtattaaataatgaagtcaggaaagg-tgacattgtgatcaaagactgaaacaagg----tgaatgaatgaaccatgcagatatttgggggacgaatattctagtcagagggaacagtccatgccaaggccctgtggtgggagtatgcctga---------cctatgtgaggaacagt--gagaaggacagtgggg------------cggaacTTGATGACTCATTTTAAAACCCCCTCTCTCTTTCTCCTGCCTCacacttagagactggagaaaaga-agaggaaccagcag-----acagaagcaaaggccagtaaggttggaggaaaacagaaaaggcaggttgctctggaaggcaaggaggaaagagtgatcatgtgtgtgccagatgaggactgagacttctctgttggatttagcaacaaacaggtcatcggtgaccacagcaagggccattttggtgaacagatggggacaccaacctgatagggtgaattcaagagagaagaaggaggagaacgg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29829752 1231 - 227556264 tcaaccTGCTTAATATGTAGTTTTGACAGCCCCCTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGATGG----TGTAAGCCAGGAGTTTG--TCTGAACA----GCTACTGTCCTTCTCTGAGCCTCCATTT----ACTGTAGAAGGGCTAATAATTCTCCCTGTATTGGCTAGTGGTGAAAGCTAAGGAACCTGGCATGCAGTAGGTGCTCTCTGAATGAGGCACCATTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCTACCCAAGTGTCATGGCCTGCACATCAACTCCTGCAGCAAAAATGCAGTACTT-CCTCACCTCTCTCCTGACTGTCTCTTCTAGCAGTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGCCCACTTGTAGGTGCAtttacaaaactgtgagttctacaagggtaggggtc-ttgtc--tttctcagctctatatgtccagcgccttgaaaaggaaaataaatataataagcattcaTCCattcattcatttatctaatactattgagcacctattatattctgggcactatcctaagtgctgtgattcagcactgaacaagagggacaatatcactgctcttcctgacatatttggtggaggaggtgggcaatatactaataggtcaaataca-tagtatgcaaagatggtaatgagagcaattt-aggata-aaacacgggggaggggaagac--aaggcaaaaatgaggagagcgtagtattaaataatgaagtcaggaaagg-tgacattgtgatcaaagactgaaacaagg----tgaatgaatgaaccatgcagatatttgggggacgaatattctagtcagagggaacagtccatgccaaggccctgtggtgggagtatgcctga---------cctatgtgaggaacagt--gagaaggacagtgggg------------cggaacttggtgaCTCATTTTAAAACCCCCTCTCTCTTTCTCCTGCCTCacacttagagactggagaaaaga-agaggaaccagcag-----acagaagcaaaggccagtaaggttggaggaaaacagaaaaggcaggttgctctggaaggcaaggaggaaagagtgatcatgtgtgtgccagatgaggactgagacttctctgttggatttagcaacaaacaggtcatcggtgaccacagcaagggccattttggtgaacagatggggacaccaacctgatagggtgaattcaagagagaagaaggaggagaacgg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32595747 1231 + 220367699 tcgacCTGCTTAATATGTAGTTTTGACAGCCCCCTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGATGG----TGTAAGCCAGGAGTTTG--TCTGAACA----GCTACtgtccttctctgagcctccattt----acTGTAGAAGGGCTAATAATTCTCCCTGTATTGGCTAGTGGTGAAAGCTAAGGAACCTGGCATGCAGTAGGCGCTCTCTGAATGAGGCACCATTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCTACCCAAGTGTCATGGCCTGCACATCAACTCCTGCAGCAAAAATGCAGtactt-cctcacctctctcctgACTGTCTCTTCTAGCAGTGTCTGGCTCTTAAGAGCTTCTGGCCTATTCCATCCCAAGGCCCACTTGTAGGTGCATTTACAAAACTGTGAGTTCTACAAGGGTAGGGGTC-TTGTC--TTTCTCAGCTCTATATGTCCAGCGccttgaaaaggaaaataaatataataagcattcatccattcattcatttatctaatactattgagcacctattatattCTGGGCACTATCCTAAGTGCTGTGATTCAGCACTGAACAAGAGGGACAATATCACTGCTCTTCCTGACATATTTGGTGGAGGAGGTGGGCAATATACTAATAGGTCAAATACA-TAGTATGCAAAGATGGTAATGAGAGCAATTT-AGGATA-AAACACAGGGGAGGGGAAGAC--AAGGCAAAAATGAGGAGAGCGTAGTATTAAATAATGAAGTCAGGAAAGG-TGACATTGTGATCAAAGACTGAAACaagg----tgaatgaatgaaccatGCAGATATTTGGGGGACGAATATTCTAGTCAGAGGGAACAGTCCATGCCAAGGCCCTGTGGTGGGAGTATGCCTGA---------CCTCTGTGAGGAACAGT--GAGAAGGACAGTGGGG------------CGGAACTTGGTGACTCATTTTAAAAccccccctctctttctcctgcctcacacttAGAGActggagaaaaga-agaggaacCAGCAG-----ACAGAAGCAAAGGCCAGTAAGGttggaggaaaacagaaaaggcagGTTGCtctggaaggcaaggaggaaagaGTGATCATGTGTGTGCCAGATGAGGACTGAGACTTCTCTGTTGGATTTAGCAACAAACAGGTCATTGGTGACCACAGCAAGGGCCATTCTGGTGAACAGATGGGGACACCAACCTGATAGGGTGAATTcaagagagaagaaggaggagaacaG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28110981 1224 - 130588469 tcgaccTGCTTAATATGTAGTTTTGACAGCCCCCTTAAATCTATCTGAATTAAGACAAGGTAAAAGTCAAATCAATGTGATGG----TGTAAGCCAGGAGTTTG--TCTGAACA----GCTGCTGTCCTTCTCTGAGCCTCCATTT----ACTGTAGAAGGGCTAATAATTCTCCCTGTGTTGGCTAGTGGTGAAAGCCAAGGAACCTGGCATGCAGTAGGTGCTCTCTGAATGAGGCACCATTGGGACTCCCTTCCCTT-TCCACTCAGTAGAGCTACCCAAGTGTCATGGCCTGCACATCAA---CTGCAGCAAAAATGCAGTACTT-CCTCACCTCTCTCCTGACTGTCTCTTCTAGCAGTGCCTGGCTCTTAAGAGCTTCTGGCCTA-TCCATCCCAAGGCCCACTTGTAGGTGCAtttacaaaactgtgagttctacaagggtaggggtc-ttgtc--tttctcagctctatatgtccagctccttgaaaaggAAAATAATTATAATAAGCATTCATCCattcatttatttatctaatattatggagcacctattatattctgggcactatcctaagtgctgggattcagcactgaacaagagggacaatatcactgctcttcctgacatatttggtggaggaggtgggcaatatactaataggtcaaataca-tagtatgcaaagatggtaataagagcaattt-aggata-aaacacaggggaggggaagac--aaggcaaaaatgaggagagcatagtattaaataatgaagtcaggaaagg-tgacattgtgatcaaagactgaaacaagg----tgaatgaatgaaccgtgcagatatttgggggacgaatattctagtccgagggaacagtccatgccaaggtcctgtggtgggagtatgcctga---------cctatgtgaggaacagt--gagaaggacagtgggg------------cggaacttggtgaCTCATTTTAAAACCCCCTCTCTCTTTCTCCTGCCTCacacttagacaccggaaaaaaga-aggggaaccagcag-----acagaagcagaggccagtaaggttggaggaaaacagaaaaggcaggttgctccggaaggcaaggaggaaagagtgatcatgtgtgtgccagatgaggactgagacttctctgttggatttagcaacaaagaggtcatcggtgatcacagcaagggccattttggtgaacagatggggacaccaacctgatagggtgaattcaagag---agaaggaggagaacgg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64563842 1197 + 155834243 tcaacATGCTTAATATGCAGTTTTGACAGTCACCTTAAATCTATCTTAATTAAGGCAAGGTGAAAGTCGAATCAATGTGGTGG----TATAAGCCAGGAGGCTG--CCTGAAGA----GTTACTCTCCTTCTCTAAGCCTCCATTT----ACTGTAGAAGAGCTAATAATTCTCCCTTTATTGGCTAGTGGTGAAAGCTAAGGAACCTGGCATGCAGCAGGTGCTCCCTGAATGATGCACCACTGGGACTCCCTTCCATT-TCCACTCATTAGAGCTACCCAGGTGCCATGGCCTGCA-ATCAAGTCCTGCAGCAAAAATG------------CATCTCTCTCCTGTCTGTCTCTTCTAGCAGTGTCTGGCTGTTAAGAGCTTCTGGCCTATTCCATCCCAAGGCCCACTTGTAGGTGCAtttacaaaacttttagttctgtaagggtaggggtc-ttgtc--ttcctcagctctgtaggtccagctcctTGAAAAGGAAAATAGCAATAATAAGCATTCATCCatctattcatttatctagtactcttgagcacctattatatcctgggtactgtcctaagtgctgggattcagcactgaacaagagggacaatatcactgttcttactgacatatttggtggaggaggagggcgatatactaatatgtcaaataca-tagtatgcaaagatgctaataagagcgattt-aggatg-aaaagcaggg--ggggaagacagaaggcaaaaatgaggacagcatactattaaataatgaagtaaggaaaggttgacattgtgattaaagactgaaacaagg----tgaatgaatgaaccatgcagatatgtgggggacaaacattctagccagagggaacagtccatgccaaggccctgtggtgggagtacgc--------------------------cagt--gaga---acagtgggg------------cggagctttgtggctCATTTTAAAGCC--CTCTCTCTTTCTCCTGctccacacttagggactggatagaaga-ggaggaaccagcag-----acagaagcagaggccggtgaggttagaggaaaacagaaacggcaggttgctccagaaggcaggga-gaaagagggatcatgtgcatgccagataaggattgagactcctctgttggatttagcaatgaggatgtcatcggtggccatagcaagggccattttggtgaagagagggggatgccaacctgatagggttaattcaagagaggagaatgaggagagcag i calJac3.chr7 C 0 I 5 s canFam3.chr2 14961353 1135 - 85426708 TTCATAAGTTCAATATATTATTTTGATAGTCACCTTAAACCTATCTAAATCAAGACAAGGTAAAAAT-AAACCAACGTGATAGTATATATAAGCCAAGAGGCTGTCTCTGACCATTCTGTTGCTTTCTCTCTATGAGCCTCCGTTGTCTAGCTGTGGAAAGACTAATAATTCTTAGT-TGATAGTTTATGGTACAGGCTAGAGAACATGGTACACAGTAGATACTCACCAAATGTT-----------ACTCCTTTCCCTTCTCCCTTCAGTAGGGCTACCCAGATACCACTGCCTGGACACCAAGCCTTG--------------GGCTGCTCCCGCCTCTCTCCTGCCTGCCTCTCCCAGCAACATCTAGCTTTTATGAGCTTCTGGT--------------------GTTGAAGTTGCTTTT--AAAATCATCCCTCCT-----TGTAGGCCTCTTTGTCCTCTCCTCAGCTTTGTATTTCTAGCTCCTTGAAGGGGAAGATAACTATTTTGGGTATTCACGcattcattc----aactcatcccactgagcacctactatgttcagagcactatcctaaggcctgggagtcagcagtgaac-ggagagaagatatatttgccctt------atattcagtggacg-ggcagacactataccaatagatcaaatgcattagtgtgc-aagatggtgataagagcaactg-agggta-agaagcaggg-aggggaaggtgaagtgcagaaataaagagcctaccattttaaatagtgaggtcaggagatg-tgacatgttga-aacagactgaaaacagt-------------gaaccacacagatattttgggg----agatctgaggcaaatggaacagcaaatgcaaaggtcctggggtgggacagtggctggagcagaggcatcagatggagagcaagaagagatggttaatgagggttcagactgctaagagcttggtggatc----tgagacccaccttcaccttctccca----acatttaaaaacagggaaaaagagggggggatcagcaggagacgcagaa-cagaggccagtgaggtaggaggaaaactgaagggg------------agtgacaaggaggcaagagcgctcaggtgcgtgcaaggtgaggactgaggctcgcccaccggatttgg---tgaggaggacaccggccacctggacaagagctgtttaagtgaacgggtgtggac--------------------tcaag--------------------- i canFam3.chr2 I 392 C 0 a score=164227.000000 s hg38.chr1_KI270760v1_alt 3398 91 + 109528 ttgaatgagcaagcttaggcaacattttgaggggttttgcttaggagaggagcagag----aaatgcggcaggact---tggaagggaataaggagtc s panTro4.chr1 30434300 91 + 228333871 ttgaatgagcaagcttaggcaacactttgaggggttttgcttaggagaggagcagag----aaatggggcaggact---tggaagggaataaggagtc i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33319895 95 + 229590362 ttgaatgagcaagcttaggcaacactttgaggggttttgcttaggagagaagcagagaaataaatagggcaggact---tggaggggaatgaggagtc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29830983 95 - 227556264 ttgaatgagcaagcttaggcaacactttgaggggttttgcttaggagagaagcagagaaataaatagggcaggact---tggaggggaatgaggagtc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32596978 95 + 220367699 TTGAATGAGCAAGTTTAGGCAACACTTTGAGGGGTTTTGCTtaggagagaagcagagaaataaaTAGGGCAGGACT---TGGAGGGGAATGAGGAGTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112205 95 - 130588469 ttgaatgagcaagcttaggcaacactttgaggggttttgcttaggagagaagcagagaaataaatagggcaggact---tggaggggaatgaggagtc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64565044 91 + 155834243 ataagtgagcaatcttacgcaacactttgaggggttttgcttaggagaggaactgag----aaatggagcagaact---tggaagggaatgaggagtc i calJac3.chr7 I 5 C 0 s canFam3.chr2 14962488 65 - 85426708 -------------cctgatcaa----------------gctcaagaaaggaggtgag----gaacgcaattggaatgagtggaaaagaatgaggggtc i canFam3.chr2 C 0 C 0 e ponAbe2.chr1 30022742 175 - 229942017 M a score=14727.000000 s hg38.chr1_KI270760v1_alt 3489 15 + 109528 aagaggtttaattc------t- s panTro4.chr1 30434391 15 + 228333871 aagaggtttaattc------t- i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33319990 14 + 229590362 aagaggtttaattc-------- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29831078 14 - 227556264 aagaggtttaattc-------- i macFas5.chr1 C 0 I 2 s papAnu2.chr1 32597073 14 + 220367699 AAGaggtttaattc-------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112300 20 - 130588469 aagaggttaaattctttttt-- i chlSab2.chr20 C 0 I 2 s calJac3.chr7 64565135 15 + 155834243 aagaggtttacttc-------t i calJac3.chr7 C 0 C 0 e canFam3.chr2 14962553 0 - 85426708 C e ponAbe2.chr1 30022742 175 - 229942017 M a score=405662.000000 s hg38.chr1_KI270760v1_alt 3504 183 + 109528 ttttttttttaatttttttagacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgcttactgcaacctccacctccc-agttcaagtgattctcctgcctcagcctcccaagtagctgagactacaggcgtgtgccaccgcgcccagctaatttttgtggttttagtc s panTro4.chr1 30434406 181 + 228333871 ttttttaaat--tttttttagacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgctcactgcaacctccacctccc-agttcaagtgattctcctgcctcagcctcccaagtagctgagactacaggcgtgtgccaccgcgcccagctaatttttgtagttttagtc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30022922 182 - 229942017 tttttttttt--tttttttagacagagtcttgctctgttgcccaggttagaagtgcagtggtgtgatccctgctcactgcaacctccacctccc-agttcaagtgattctcctgcctcagcctcccaagtagctgagactactggcctgtgccactgcgcccagctaatttttgtagttttagtc i ponAbe2.chr1 M 175 C 0 s rheMac3.chr1 33320004 181 + 229590362 -ttttttttt--ttttttttgacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgctcactgtaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggactacaggcgtgtgccaccttgcctggctaatttttgtattttcagtc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29831094 182 - 227556264 tttttttttt--ttttttttgacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgctcactgtaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggactacaggcgtgtgccaccttgcctggctaatttttgtattttcagtc i macFas5.chr1 I 2 C 0 s papAnu2.chr1 32597087 180 + 220367699 --tttttttt--tttttttagacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgctcactgtaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggactacaggcgtgtgccaccttgcctggctaatttttgtattttcagtc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112322 182 - 130588469 tttttttttt--tttttttagacagagtcttgctctgttgcccaggctag-agtgcagtggtgtgatctctgctcactgtaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaaatagctgggactacaggcgtgtgccaccttgcctggctaatttttgtattttcagtc i chlSab2.chr20 I 2 C 0 s calJac3.chr7 64565150 181 + 155834243 ctcttttgtt--gttgttgagacagagtctcactctgttgcccaggctgg-agtgcaatggtgcaatctcggctcactgcaa-ctccacctcctgggttcaagtgattctcctgcctccgcctcccaagtagctgggactacaggtgtgccccactgcacccggctaatttttgtatttttagta i calJac3.chr7 C 0 C 0 e canFam3.chr2 14962553 0 - 85426708 C a score=25058.000000 s hg38.chr1_KI270760v1_alt 3687 11 + 109528 aagacagggtt s panTro4.chr1 30434587 11 + 228333871 aagacggggtt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30023104 11 - 229942017 gagacggggtt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33320185 11 + 229590362 gagatggggtt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29831276 11 - 227556264 gagatggggtt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32597267 11 + 220367699 gagatggggtt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112504 11 - 130588469 gagacgggttt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64565331 11 + 155834243 gagacagtgtt i calJac3.chr7 C 0 C 0 s canFam3.chr2 14962553 11 - 85426708 aagagaggttt i canFam3.chr2 C 0 C 0 a score=249090.000000 s hg38.chr1_KI270760v1_alt 3698 105 + 109528 tcacgatattggccaggctggtcttgaactcctgacctcaaatgatccacccaactcagcctcccaaagtgttgggattacaggcatgagccactgcgcccggcc s panTro4.chr1 30434598 105 + 228333871 tcaccatattggccaggctggtcttgaactcctgacctcaaatgatccacccaactcagcctcccaaagtgttgggattacaggcatgagccactgcgcctggcc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30023115 105 - 229942017 tcaccatattggccaggctggtcttgaactcctgacctcaaatgatccacccaactcagcctcccaaagtgttgggattacaggcatgagccactgtgcctggcc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33320196 105 + 229590362 tcaccatattggccaggctggtcttgaactcctgacctcaaatgatccacccaactcggcctcccaaagtgctgggattgcaggcgtgaactgctgcgcccagcc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29831287 105 - 227556264 tcaccatattggccaggctagtcttgaactcctgacctcaaatgatccacccaactcggcctcccaaagtgctgggattgcaggcgtgaactgctgcgcccagcc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32597278 105 + 220367699 tcaccatattggccaggctagtcttgaactcctgacctcaaatgatccacccaactcggcctcccaaagtgctgggattacaggcgtgaactgctgcgcccggcc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112515 105 - 130588469 tcaccatatgggccaggctggtcttaaactcgtgacctcaaatgatccacccaactcggcctcccaaagtgctgggattacaggcgtgaaccactgcgcccagcc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64565342 105 + 155834243 tcaccattttggccaggctcatcttgaactcctgacctcaaatgatccacccaacttggcttcccaaagtgctgggattacaggcgtgaaccaccactcctggcc i calJac3.chr7 C 0 C 0 e canFam3.chr2 14962564 0 - 85426708 C a score=2645129.000000 s hg38.chr1_KI270760v1_alt 3803 1021 + 109528 gcttctcttttaaatgggaaaaatatttgcatgctgtttgtctgctaatgggagggattgaataaaagggaaaaatttgaggatacag--------gagaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGCCTAttctggtcccagcacattaatttttgattagggagtgacccttctccacccccttcagttcaaatggcccaagtgaggctgcctgagtccctggcttcaggagtgggcatttgaccaggcctgatcaataagagcactgcagtcccagg------------------------ccaatggcccaagctgccccactctgagctaaagagcaacagccctaggagttttgctggagcacctaggaatgggagactctctttccact-gggtggctgaactgacag------------ggtgtggactcagctgtgcctgcacccagagcctgccccagcataga-----------gcctgcaccagcataaagccTGCCATGGAGCAGGC---TAATGCCTGTGTAATACAACTGGATTCCTGGAGC---------CTG--GCTGccctcctcccaggctggtctttctttgctccatcact-----ctgttttagctcctctgtagtcatcatcactacttg-----ccttattacttaatttgtttattcatttattgtctccc----tcataggaacctttgtctaccttttccattgctgtatccccaggatctc------tttctagcacagagtagggcttcaaataaatattagttgaccgaataagtGAATATGTAAGAATGTGCTACAGCTGTATATTCATCTTGAACCatatctcacttatc------caggcatctggcagcttcagctatctagaatggaacac-aaatacccaaaaagccctagaattaccaaaatgcaagtcacatggaccatgtctacaagcacaagttttttgtttttgtaaacagaggtgctc---------cctcactcagagatgagaggcttctactgcaggcgtggttctcatatgcccggtgagttggttgtccaaccacaacaggttagtggcagggcgctaggaggagtggg s panTro4.chr1 30434703 1006 + 228333871 acttctcttttaaatgggaaaaatatttgcatgctgtttgtctgctaatgggagtgattgaataaaagggaaaaatttgaggatacag--------gagaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGcctcttctggtcccagcacattaatttttgattggggagtgacccttctccacccccttcagttcaaatggcccaagtgaggctgcctgagtccctggcttcaggagtgggcatttgaccacgcctgatcaataagagcactgcagtcccagg------------------------ccaatggcccaagctgccccactctgagctaaagagcaacagccctaggagttttgctggagcacctaggaatgggagactctctttccact-gggtggctgaactgacag------------ggtgtGGACTCAGCTGTGCCTGCACCCAGAGCCTGCCCCAGCATAAA--------------------------AAGCCTGCCATGGAGCAGGC---TAATGCCTGTGTAATACAACTGGCTTCCTGGAGC---------CTG--GCTGccctcctcccgggctggtctttctttgctccatcact-----ctgttttagctcctctgtagtcatcatcactacttg-----tcttattacttaatttgtttattcatttattgtctccc----ccataggaacctttgtctaccttttccattgctgtatccccaggatctc------tttctagcacagagtagggcttcaaataaatattagttgatcaaataagtgaatATGTAAGAATGTGCTACAGCTGTATATTCATCTTGAACCatacctcacttatc------caggtatctggcagcttcagctatctagaatggaacac-aaatacccaaaaagccctagagttaccaaaatgcaagtcacatggaccatgtctacaagcacaagttttttgtttttgtaaacagaggtgctc---------cctcactcagagatgagaggcttctactgcaggtgcggttctcatatgcccggtgagttggttgtccaaccacaacaggttagtggcagggcgctagaaggggtggg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30023220 1034 - 229942017 ACttctcttttaaatgggaaaaatatttgcatgctgtttgtctgctaatgggagtgattgaataaaagggaaaaatttgaggatacag--------gtgaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGcctcttctggtcccagcacattaatttttgattggggagtgacccttctacacccccttcagttcaaatggcccaagtgaggctgcctgagtccctggcttcaggagtgggcatttgaccaggcctgatcaatatgagcactgcagtcccagg------------------------ccaatggcccaagctgccccactctgagctaaagagcaacagccctaggagttttgctggagcccctaggaatgggagactctctttccactggggtggctgaactgacagggtgtgcactcaggtgtgcactcagctgtgcCTGCACCCAGAGCCTGCCCCAGCATAGA-----------GCCTGCCCCAGCATAGAGCCTGCCATAGAGCAGGC---TAATGCCTGTGTAATACAACTGGCTTCCTGGAGC---------CTG--GCTGccctcctcccaggctggtctttctttgctccatcact-----ttgttttagctcctctgtagtcatcatcactacttg-----tcttattacttaatttgtttattcatttactatctccc----ccataggaaccttgttctacctttttcattgctgtatccccaggatgtc------tttctagaacagagtagggcttcaaataaatattagttgatcgaataagtGAATGTGTAAGAATGTGCTACAGCTGTATATTCATCTTGAACCatacctcacttatc------caggcatctggcagcttcagctatctagaatggaacac-aaatacccaaaaagccctagagttaccaaaatgcaagtcacatggaccatgtctacaagcacaagttttttgtttttgtaaacaggggtgctt---------cctcactcagagatgagaggttcctactgcaggcacggttcttatatgcccggtgagttagttgtccaaccacaacaggttagtggcagggcgctaggaggggtggG i ponAbe2.chr1 C 0 I 243 s rheMac3.chr1 33320301 1021 + 229590362 acttctcttttaaatgggaaaaatatttgcatgctgtttg-ctgctaatgggggtgattgaataaaaggggaaaatttgaggatgcag--------gagaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGcctctcctggtcccagcacattaattgttgatcggggagtgacccttctccacccccttcagttcaaatggcccaaatgaggctgcttgagtccctggcttcaggagtaggcatttgaccagacctgatcaataagagcactgcagtcccagg------------------------tcaatgacccaagctgccccactctgaggtaaagatcaacagccctaggagttttgttggagcacctaagaatgggagactcgctttccactggggcggctgaactgacag------------ggtgtgggcTCAGCTGTGCCTGCACCCAGAGCCTGACCCAGCATGGG-----------GCCTGCCCCAGCATAGAGCCTGTCATGGGGCAGGC---TAATGCCTGTGTAATACAGCTGGCTTCCTGGAGC---------CTG--GCTGCccttctcccaggctggtctttccttgctccatcact-----ctgttttagttcctctgtagtcatcatcactactta-----tcttattacttaatttgtttattcatttattatctctc----ccacaggaaccttgatctatcttttccattggtgtatccccaggatctc------tttctggcatagaacaaggcttccaataaatattagttgatggaataagtGAATCTGTAAGAATGTGCTACAGCTGCATATTCATCTTGAACCacacctcacttatc------caggcatctggcagcttcagctatctagaatgcaacac-aaataccataaaagccctggagttaccaaaatgcaagtcacatggaccatgtctacaagcacaggctttttgtttttgtaaacagaggtgctc---------cctcactcagagatgagaggctcctactgcaggcgcagttcttacatgcccgatgagtgggttatccaaccacaacaggttagtggcagggttctgggatgggtggg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29831392 1021 - 227556264 acttctcttttaaatgggaaaaatatttgcatgctgtttg-ctgctaatgggggtgattgaataaaaggggaaaatttgaggatgcag--------gagaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGCCTCTCCTGGTCCCAGCACATTAATTGTTGATCGGGGAGTGACCCTTCTCCACCCCCTTCAGTTCAAATGGCCCAAATGAGGCTGCTTGAGTCCCTGGCTTCAGGAGTGGGCATTTGACCAGACCTGATCAATAAGAGCACTGCAGTCCCAGG------------------------TCAATGACCCAAGCTGCCCCACTCTGAGGTAAAGATCAACAGCCCTAGGAGTTTTGTTGGAGCACCTAAGAATGGGAGACTCGCTTTCCACTGGGGTGGCTGAACTGACAG------------GGTGTGGGCTCAGCTGTGCCTGCACCCAGAGCCTGACCCAGCGTGGG-----------GCCTGCCCCAGCATAGAGCCTGTCATGGGGCAGGC---TAATGCCTGTGTAATACAGCTGGCTTCCTGGAGC---------CTG--GCTGCccttctcccaggctggtctttccttgctccatcact-----ctgttttagttcctctgtagtcatcatcactactta-----tcttattacttaatttgtttattcatttattatctctc----ccacaggaaccttgatctatcttttccattggtgtatccccaggatctc------tttctggcatagaacaaggcttccaataaatattagttgatggaataagtGAATCTGTAAGAATGTGCTACAGCTGCATATTCATCTTGAACCacacctcacttatc------caggcatctggcagcttcagctatctagaatgcaacac-aaataccataaaagccctggagttaccaaaatgcaagtcacatggaccatgtctacaagcacaagctttttgtttttgtaaacagaggtgctc---------cctcactcagagatgagaggctcctactgcaggcgcagttcttacatgcccgatgagtgggttatccaaccacaacaggttagtggcagggttctgggatgggtggg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32597383 1019 + 220367699 acttctcttttaaatgggaaaaatatttgcatgcTGTTTG-CTGCTAATGGGGGTGATTGAATAAAAGGGGAAAATTTGAGgatgcag--------gagaga----gagaagcgATATTCTTAAGTAGGCCAT---GTGTCTTTGCCTCTTCTGGTCCCAGCACATTAATTGTTGATCGGGGAGTGACCCTTCTCCACCCCCTTCAGTTCAAATGGCCCAGATGAGGCTGCTTGAGTCCCTGGCTTCAGGAGTGGGCATTTGACCAGACCTGATCAATAAGAGCACTGCAGTCCCAGG------------------------TCAATGACCCAAGCTGCCCCACTCTGAGGTAAAGATCAACAGCCCTAGGAGTTTTGTTGGAGCACCTAAGAATGGAAGACTCTCTTTCCACTGGGGTGGCTGAACTGACAG------------GGTGTGGGCTCAGCTGTGCCTGCACCCAGAGCCTGCCCCAGCATGGG-----------GCCTGCCCCAGCATAGAGCCTGTCATGGGGCAGGC---TAATGCCTGTGTAATACAGCTGGCTTCCTGGAGC---------CTG--GCTGCccttctcccaggctggtctttccTTGCTCCATCA-------CTGTTTTAGTTCCTCTGTAGTCATCATCACTACTTA-----TCTTATtacttaatttgtttattcatttattatctctC----TCACAGGAACCTTGATCTATCTTTTCCATTGGTGTATCCCCAGGATCTC------TTTCTGGCATAGAACAAGGCttccaataaatattagttgatgGAATAAGTGAATCTGTAAGAATGTGCTACAGCTGCATATTCATCTTGAACCACACCTCACTTATC------CAGGCATCTGGCAGCTTCAGCTATCTAGAATGCAACAC-AAATACCACAAAAGCCCTGGAGTTACCAAAATGCAAGTCACATGGACCATGTCTACAAGCacaagctttttgtttttgtaaacagAGGTGCTC---------CCTCACTCAGAGACGAGAGGCTCCTACTGCAGGCGCAGTTCTTACATGCCCGATGAGTGGGTTATCCAGCCACAACAGGTTAGTGGCAGGGTGCTGGGATGGGTGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28112620 1021 - 130588469 acttctcttttaaatgggaaaaatatttgcatgctgtttg-ctgctaatgggggtgattgaataaaaggggaaaatttgaggatgcag--------gagaga----gagaagcgatattcttaagtaggcCAT---GTGTCTTTGcctcttctggtcccagcacattaatttttgattggggagtgacccttctccacccccttcagttcaaatggcccaaatgaggctgcctgagtccccggcttcaggagtgggcatttgaccagacctgatcaataagagcactgcagtcccagg------------------------tcaatgacccaagctgccccactctgaggtaaagatcaacagccctaggagttttgttggggcacctaagaacgggagactctctttccactggggtggctgaactgacag------------ggtgtgggctcagctgtgcctgcacccagagcctgccccagcatggg-----------gcctgccccagcatagagccTGTCATGGGGCAGGC---TAATGCCTGTGTAATACAGCTGGCTTCCTGGAGC---------CTG--GCTGCccttctcccaggctggtctttccttgctccatcact-----ctgttttagttcctctgtagtcatcatcactacttg-----tcttattacttaacttgtttattcatttattgtctctc----ccacaggaaccttgatctatcttttccattgttgtatccccaggatctc------tttctggcatagaataaggcttccaataaatattagttgatggaataagtGAATCTGTAAGAATGTGCTACAGCTGCATATTCATCTTGAACCacacctcacttatg------caggcaactggcagcttcagctatctagaatgcaacac-aaataccataaaagccctggagttaccaaaatgcaagtcacatggaccatgtctacaagcacaagctttttgtttttgtaaacagaggtgctc---------cctcactcagagacgagaggctcctactgcaggcgcagttcttacatgcccgatgagtaggttatccaaacacaacaggttagtggcagggttctgggatgggtggg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64565447 1003 + 155834243 acttgtcttttaaatgggaaaaatatttgcaggctgtttgtctgctgatgggagtaattgaataaaaggggaaaatttgagaatgctg--------gagaga----gagaagcaatattcttaagtaggcCCT---GTGTCTTTGCCTAttctggtcacagcacaccaatttttgataggggagtgacccttctctacccacttcagttcaaatggcccaagtgaggctgcctgagtccctagcttcaggagtgagcatttgaccaggcctgatcaataacagcaccacggtcccagg------------------------ccagtggcccaagctgccctactctaagccaatgagcaacagccctaggagttttgctggagcacttaggaacagggaa--cgctttccactggggtgcctgaactgacag------------agtgtGGACTCAGCTGTGCCTGCACCCAGAGCCTGCCCCAGCACA----------------------------GAGCCTACCACGGAGCAGGA---TAATGCCTGTGCAGTGCAACTGGCTTTCTGGAGC---------CCG--GCTGCCCTCCTCCCAGGCTGGcctttccctgctccatcatt-----ctcttttagttcctccgtagtcatcatcactacttg-----tcttattacttaatttgtttgttcatttattatctccc----ccatagaaaccttggtctatcttttccactgctgtatccccaggatctc------cttctgccatagagtagggcttcaggtaagtattagttgactgattgaGCCAATCTGTAAGAATGTACTACAGCTCCATATTCATCTTGAACCatacctcacttatc------aaggcatctggcagcttcagctagctggaatgtaacat-gaaaacccagaaattcctggagttactaaaatgcaagtcacatgggccatgtctacaagcacaagcttcttgtttttgtaaatacaggtgctc---------cctcactcagagatgagaggctcctactgcaggcgtgcttcttacacgcccagtgatttgattgtccaatcagagcaggttagtggcagggtgctaggagaggtggg i calJac3.chr7 C 0 C 0 s canFam3.chr2 14962564 1089 - 85426708 atttctcttctaaatgagagaaatgtctctactctgcgtg----ccaat-ggaatgacaattaaaaaagggaacatccgatgatgcagaaagacacgggggacttggaggagctgtattctcgagt--GCCCTCGGGTGTCCTTAcctcttct-gtcacagcacaccactcttctgttgggggg-------gccacaccctgcttccttcaaggacccgggatgagactgccccag-ccctgacttcagcagtgggcaccagaacagatctgaccaacaggactatagcagcctcaggcctgtgattggctagaggaggggtcctgtgacccgatctgggccaatcagag-tgaagagcatcttctctgggccttctga-ggaacccctgagaattggaggctctcctgccgtagcggtggctgggctggtag------------AGGGCAA--TCAGCAGTGTCTGCACCCAGAGCCTGCGTGGGTGCGGCTCCACCCGGCTGCCTGCCCTGGCATAGAACCTGCCACCAAGCTGGCTTATAAAGCCTGTGAATCAAAACaggctttctggagctgcctgtttctggagctgcccacaacccatgcccatctt---ctgctacatcattcatcactgttttagtt-ctttatagtcctgatcgctatctgaaacatccaattattccatctacttactcaagtattgtctcccccctccatggggtccttggtctatcttttctactactgtatctccaggatctagacgtgttcctggcatggagtggggctccaaataaatattagttgactgaataaatAAATACACGAAGATGTGCTTCGGCGGCATATTTATACTcagccacacctcactgatccacaggcaagcagctggcagcttcagcca-cttgaatgcaacaagaaaaactcaaaaagccctggaattattaacatgcaagttacatgggccatgtctgaaagtacatggtttttgtatttgaaaa----ggtgctccctttgtgtcctccctcagagatcagggactcctatcccagacatggttctaacatgcctggtgacctggctcccctcccagagtgggtcagaggcatgatgctgggagggg---- i canFam3.chr2 C 0 C 0 a score=20324.000000 s hg38.chr1_KI270760v1_alt 4824 16 + 109528 tcctgctggaaggtac- s panTro4.chr1 30435709 16 + 228333871 gcctcctagaaggtag- i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33321322 16 + 229590362 gccggctagaacgtag- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29832413 16 - 227556264 gccggctagaacgtag- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32598402 16 + 220367699 GCCAGCTAGAAGGTAG- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28113641 16 - 130588469 gccggctagaaggtag- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64566450 16 + 155834243 gcctgctagaaggaag- i calJac3.chr7 C 0 C 0 s canFam3.chr2 14963653 16 - 85426708 gacggccagga-gtaga i canFam3.chr2 C 0 C 0 e ponAbe2.chr1 30024254 243 - 229942017 I a score=1465429.000000 s hg38.chr1_KI270760v1_alt 4840 568 + 109528 tacatgaataccagcgagaagagacatctgGGGCCCAGAAGACCAGAAAACACCAGAAGGCAGGTGAGAGAACTCCAGGAGAAGGCGGGC-----------------------TACAGGCTGGGCTCCAGTCCTCTGGGGA----------TCCTCCGGGGCTAGAGGACATAGGGGTGACAGTGAGACTCAGAGGGCACAGAGCAAAGCTTAAATTATGCTCCACAGTGCCCTTTCCAGAAACGGG--AATGCAAGGTACATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCagaagaagaagcagaagaaATAAAAATCGCCTGTCATCTT------AGAGATGCCTCCATGATGAGCATGTGATACGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattccatcacacggacatcaaat-------------attcccctactggacaatttgcttccaaatatttgctgttaaccgtaacacagtagtgag-attcttgtacgtaatcatggaggctcagacct------ctctcttgatagtagaattgctaggtcaaaagtatgggcatt s panTro4.chr1 30435725 568 + 228333871 tacatgaacaccagcgagaagagacatctCGGGCCCAGAAGACCAGAAAACACCAGAAGGCAGGTGAGAGAACTCCAGGAGAAGGAGGGC-----------------------TACAGGCTGGGCTCCAGTCCTCTGGGGA----------TCCTCTGGGGCTAGAGGACATAGGGGTGACAGTGAGACTCAGAGGGCACAGAGCAAAGCTTAAATTATGCTCCACAGTGCCCTTTCCAGAAACGGG--AATGCAAGGTACATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCAGAAGAAGCAGCAGAAGAAATAAAAATCGCCTGTCATCTT------AGAGATGCCTCCATGATGAGCATGTGATACGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattccatcacatggacatcaaat-------------attcccctactggacaatttgcttccaaatatttgctgttaaccataacacagtagtgag-attcttgtacataatcatggaggctcagacct------ctctcttgatagtagaattgctaggtcaaaagtatgggcatt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30024497 568 - 229942017 TACATGAACACCAGTGAGAAGGGACATTTGGGACCCAGAAGACCAGAAAACACCAGAAGGCAGGTGAGAGAACTCCAGGAGAAGGCAGGC-----------------------TACAGGCTGGGCTCCAGTCCTCTGGGGA----------TCCTCCGGGGCTAGAGGATATAGGGGTGAGAGTGAGACTCAGAGGGCACAGAACAAAGCTTAAATTATGCTCCACAGTGCCCTTTCCAGAAACAGG--AATGCAAGGTACATTTTATCATCCGTTTTTAGAG-AGATTGATTCAATGCAGAGGAAGAAGCAAAAGAAATAAAAATCGCCTGTCATCTT------AGAGATGCCTCCATGATGAGCATGTGATATGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattctatcacacagacatcaaat-------------attcccctactggacaatttgcttgcaaacatttgctgttaaccataacacagtagtgag-attcttgtacataatcatggaggctcagacct------gtctcttgattgtagaattgctaggtcaaaagtatgggcatt i ponAbe2.chr1 I 243 C 0 s rheMac3.chr1 33321338 575 + 229590362 tacatgaacaccagtgagaagggacatctcgggcccagaagaccagaaaacaccagaaggcagatgacagaactccaggagaaggcggac-----------------------tgcaggctgggCTTCAGTCCTCTGGGGATCCTCTGCGGTCCTCTGGGACTAGAGGACATAGGGGTGAGAGTGAGACTCAGAGGGCACAGAGCAAAGCTTAAATTATGCTCCACAGTGCCCTTTTCATAAACAGG--AATGCAAGGTGCATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCAGAGGAACAAGCAGAAGAAATAAAAATCAACT---GTCTT------AGAGATGCCTCCAAGATGAGCGTGTGATATGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattccatcacatgaacatcaaat-------------attcccctactggacaatttgcttccaaatattggctgttaaccataacattatagtgag-attcttgtacgtaaTCATGGAGGCTCAGACCT------GTCTCTTGATGGTAGAATTGCTCAGTCAAAAGTATGGGCATT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29832429 578 - 227556264 tacatgaacaccagtgagaagggacatctggggcccagaagaccagaaaacaccagaaggcagatgacagaactccaggagaaggcggac-----------------------tgcaggctgggCTTCAGTCCTCTGGGGATCCTCTGCGGTCCTCTGGGACTAGAGGACATAGGGGTGAGAGTGAGACTCAGAGGGCACAGAGCAAAGCTTAAATTATGCTCCACAGTGCCCTTTTCATAAACAGG--AATGCAAGGTGCATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCAGAGGAACAAGCAGAAGAAATAAAAATCAACTGTCGTCTT------AGAGATGCCTCCAAGATGAGCGTGTGATATGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattccatcacatgaacatcaaat-------------attcccctactggacaatttgcttccaaatattggctgttaaccataacattatagtgag-attcttgtacgtaaTCATGGAGGCTCAGACCT------GTCTCTTGATGGTAGAATTGCTCAGTCAAAAGTATGGGCATT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32598418 568 + 220367699 TACATGAACACCagtgagaagggacatttggagcCCAGAAGACCAGAAAACACCAGAAGGCAGGTGACAGAACTCCAGGAGAAGGCGGAC-----------------------TGCGGGCTGGGCTCCAGTCCTCTGGGGA----------TCCTCTGGGACTAGAGGACATaagggtgagagtgagactcagaGGGCACAGAGCAAAGCTTAAATTATGCTCCACAGCGCCCTTTCCAGAAACAGG--AATGCAAGGTGCATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCAGAGgaacaagcaaaagaaataaaaatcacctgtCGTCTT------AGAGATGCCTCCAAGATGAGCGTGTGATATGGCAGGTATTGGTTCTGC-TCGTCCATTCCAGTGTCATTAAATGTGCTTCACAAACATGACTCTTAttggctacataatattccatcaCATGAATGTCAAAT-------------ATTCCCCTACTGGACAATTTGCTTCCAAACATTGGCTGTTAACCATAACATTATAGTGAG-ATTCTTGTACGTAATCATGGAGGCTCAGACCT------GTCTCTTGGTGGTAGAATTGCACGGTCAAAAGTATGGGCATT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28113657 568 - 130588469 tacatgaacaccagtgagaagggacatctgGGGCCCAGAAGACCAGAAAACACCAGAAGGCAGGTGACAGAACTCCAGGAGAAGGCGAAC-----------------------TGCAGGCTGGGCTCCAGTCCTCTGGGGA----------TCCTCTGGGACTAGAGGACATAGGGGTGAGAGTGAGACTCAGAGGGCACAGAGCAAAGCTTAAATTTTGCTCCACAGTGCCCTTTTCAGAAACAGG--AATGCAAGGTACATTTTATCATCCATTTTTAAAG-AGATTGATTCAATGCAGAGGAACAAGCAGAAGAAATAAAAATCCCCTGTCGTCTT------AGAGATGCCTCCAAGATGAGCGTGTGATATGGCAGGTATTGGTTCTGC-TCGTCCAttccagtgtcattaaacgtgcttcacaaacatgactcttattggctgcataatattccatcacatgaacatcaaat-------------attcccccagtggacaatttgcttccaaatattggctgttaaccataacattatagtgag-attcttgtacgtaaTCATGGAGGCTCAGACCC------GTCTCTTGATGGTAGAATTGCTCAGTCAAAAGTATGGGCATT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64566466 568 + 155834243 tgcatgaacaccagtgagaagggacatctgggacccagaggaccagaaaacaccagaaagcagctgagagaactcCAGGAGAAGGTGGGC-----------------------TGCAGGCTGGGCTCCAGAGCTCTGGGGA----------TACTCTGGGGCTAGAAGACATAGGGGTGAGAGTGAGAATCGGCAGGCACAGAGCAAAGCTTAAATTATGCTCCACAGTGCCCTTTCCAGAAAGGGG--AATGCAAGGTGAATTTTATCATCTGTTTTTAAAG-GGATTGATTCAATGCAGAGGAATAAGCAGAAGAAATAAAAATGGCCTGTCATCTC------AGAGATGCCTCCATGAGGAGCAGGTGATACAGCAGGTATTGGTTTTGC-TCTTCCAttccaatgtcattaaatgtgcttcacaaacatgactcttattggctgcataatattccatcatatggacataaaat-------------gtttccctactggacaatttgcttccaaacattggctgttaaccataatactgcagtgag-attcttgtacgtaaTGATGGAGGCTCGGACCT------GTCTCCTGATAGTAGAACTGCTAGGTCGAAAGTATGGGCATT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14963669 593 - 85426708 gacactgacactagcaaggagaaacaactggaagccaggagactggaagacgctggagaggagtcacaagaactACAGGAGAGAATAGGCAAAGCCTTGAGTGTGGAATGATGGGTCGGCGGGGCAGGGG-----CGGGGG----------GTCCCTTGGACTGGA----ACATGGAAAATGGTGGATGACTAAAGGCATAGAGCAAAGTTTAAATTTTGCTCCATGCTCCCCATCCTAGAAACAGGACAATGTGAGCTATAT----TCATTTATTTTAAAAATAGATTGAGTCCATGCAGAAGAGTAAGCGGAAGACATCGTAATCACCCGTGCCCTTACTCAGAGAGATGCTC------TGAGCAGTACAT---GCAGGTGTGGGCTCTGCATGATGGAACcctgtgtcacgaagtgtgctgcacaaccatgacttttgttggctgtgtaatattccagcacaaggtcatacactatttcccaagaccatttccctattggacag--tgtttccaaacattggttatcaccgagcacgctgtagtgaacatccttg----gaagactgtgtgctcagccctgattacgtttcctgacaacagaattgctggttcaaaACTATGGGCATT i canFam3.chr2 C 0 I 158 a score=222551.000000 s hg38.chr1_KI270760v1_alt 5408 92 + 109528 ctagga--------------------------------------------------------------------tgttttacacatgcagtgaaattTATCCACTCTCAAGCTGGGTATCAGTGCCTCTTAGATGCTAAATTAATTAGATCTTGGTGGAT s panTro4.chr1 30436293 92 + 228333871 ctagga--------------------------------------------------------------------tgttttatacatgcagtgaaattAATCCACTCTCAAGCTGGGTATCAGTGCATTTTAGGTGCTAAATTAATTAGATCTTGGTGGAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025065 92 - 229942017 ctagga--------------------------------------------------------------------tgttttatacatgcagtgaaattTATCCACTCTCAAGCTGGGTATCAGCACATTTTAGATGCTAAATTAATTAGATCTTGGTGGAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33321913 92 + 229590362 CTAGGA--------------------------------------------------------------------TGCGTTATACATGCAGTGAAATTTATCCATTCTGAAGCTGGGTATTGGCGCATTTTAGATGCTAAATTAATCAGATCTTGGTAGAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29833007 92 - 227556264 CTAGGA--------------------------------------------------------------------TGCGTTATACATGCAGTGAAATTTATCCATTCTGAAGCTGGGTATTGGCGCATTTTAGATGCTAAATTAATCAGATCTTGGTGGAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32598986 92 + 220367699 CTAGGA--------------------------------------------------------------------TGCTTTATACATGCAGTGAAATTTATCCATTCTGAAGCTGGGTATTGGTGCATTTTAGATGCTAAATTAATCAGATCTTGgtggat i papAnu2.chr1 C 0 I 341 s chlSab2.chr20 28114225 92 - 130588469 CTAGGA--------------------------------------------------------------------TGCGTTATACATGCAGTGAAATTTATCCATTCTGAAGCTGGGTATTGGCGCATTTTAGATGCTAAATTAATCAGATCTTGGTGGAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64567034 92 + 155834243 CTAGGA--------------------------------------------------------------------TGTTTTACACCAGCAGTGAAATTTATCCACTCTCAAGCTGAGTATCAGCACATTTTAGAAGCTAAATTAATCAGAGCTTGGTGGAT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14964420 160 - 85426708 ccaggaccctgagatcatgacccgagctaaaggcagatacttaaccaactgagacacccaggcgccccAAGATCTTTTTTGTACATATTTTGAAGTTTACACACTCACAAATTGGGTATCGGTGACTTTTAGATGCTTAATCAATCAAACCTTGGCATTT i canFam3.chr2 I 158 C 0 a score=39160.000000 s hg38.chr1_KI270760v1_alt 5500 13 + 109528 AAAGAAATAAAGC s panTro4.chr1 30436385 13 + 228333871 AAAGAAATAAAGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025157 13 - 229942017 AAAGAAATAAAGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33322005 13 + 229590362 AAAGAAATAAAGC i rheMac3.chr1 C 0 I 327 s macFas5.chr1 29833099 13 - 227556264 AAAGAAATAAAGC i macFas5.chr1 C 0 I 326 s papAnu2.chr1 32599419 13 + 220367699 aaagaaataaagt i papAnu2.chr1 I 341 C 0 s chlSab2.chr20 28114317 13 - 130588469 AAAGAAATAAAGC i chlSab2.chr20 C 0 I 331 s calJac3.chr7 64567126 13 + 155834243 AAAGAAATAAAGC i calJac3.chr7 C 0 C 0 s canFam3.chr2 14964580 13 - 85426708 AAAGAATGAAAGC i canFam3.chr2 C 0 C 0 a score=489107.000000 s hg38.chr1_KI270760v1_alt 5513 206 + 109528 TCAATGCAGAAAAACCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTCCTGGGTGCACAATCAtgtgtgttcatgtgtgtgtgcgtgtgtgtatgcac--gtgtgt------------gtgtgttcgtg----------ca-cccatatttcactggtactatccaactactctgtgagctgtttgtggtaggtattgtcac-cccattgtacagatg s panTro4.chr1 30436398 208 + 228333871 TCAATGTAGAAAAACTC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTGTCCTGGGTGCACAATCAtgtgtgttcatgtgtgtgtgcatgtgtgtatgcacttgtgtgt------------gtgtgttcgtg----------ca-cccacatttcactagtactatccaactactctgtgagctgtttgtggtaggtattgtcac-cccattgtacagatg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025170 208 - 229942017 TCATTGTAGAAAAACCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTCCTGGGTGCACAATCgtgtgtgttcatgtgtgtgtgcatgtgtgtatgcacgtgtgtgt------------gtgtgttcatg----------ca-cccatatttcactggtactatccaactactctgtgagctgtttgtggtaggtattgtcat-cccactgtacagatg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33322345 194 + 229590362 TCATTGTAGAAAAACCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTTCCGGGTGCACAATc------------gtgtgtgtgcatgtgtgtatgcac--gtgtgt------------gtgtgttcatg----------ca-cccacatttcactggtactatccaactactctgtgagctgttcgtggtagggattgtcac-ctcattatacagatt i rheMac3.chr1 I 327 C 0 s macFas5.chr1 29833438 194 - 227556264 TCATTGTAGAAAAACCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTTCCGGGTGCACAATc------------gtgtgtgtgcatgtgtgtatgcac--gtgtgt------------gtgtgttcatg----------ca-cccacatttcactggtactatccaactactctgtgagctgttcgtggtagggattgtcac-ctcattatacagatt i macFas5.chr1 I 326 C 0 s papAnu2.chr1 32599432 194 + 220367699 tcattgtagaaaaaCCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTTCCGGGTGCACAAtc------------gtgtgtgttcatgtgtgtatgcac--gtgtgt------------gtgtgttcatg----------ca-cCCACATTTCACTGGTACTATCCAACAATTCTGTGAGCTGTTCGTGGTAGGGATTGTCAC-CCCATTGTACAGATT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28114661 206 - 130588469 TCATTGTAGAAAAACCC-CTGTGTAACACCTCTCATCCCTGGATAGTAACTGACTGGTGTCTTCTGGGTGCACAATCgtgtgtgttcatgtgtgtgtgcatgtgtgtatgcac--gtgtgt------------gtgtgttcatg----------ca-cccacatttcattggtactatccaactactctgtgagctgttcgtggtagggattgtcac-cccattgtacagatt i chlSab2.chr20 I 331 C 0 s calJac3.chr7 64567139 190 + 155834243 TCACTGTAGAAAAACCC-CTGTGTA--ACCTCTCATCCTTGGGTAGTAACTAACTGGTGTCTGCTGGCTACACAgtc------------atgtgtgttcatgtgtgtgtgc----atgtgt------------gtgtATTCATG----------CA-CCCACATTTCACTGGTACTATCcaactactctgtgagctgttcatggtgggtattgtcac-cccgttgtacagatt i calJac3.chr7 C 0 I 130 s canFam3.chr2 14964593 200 - 85426708 TCATTATAGAAAAGCCCTTTGTGTA--ACTTCTCATCCCCAGATACTAACGTA----TGTCTGT-------------------------GTGTGTGTGCACGTGTGCACACac--atatgtccagcacttctcccatgtacatggcacatttcccatcccccatgtcactagtactattcaactatcttgggagctatacaggatgtgtaatgtcactcccatattacagatg i canFam3.chr2 C 0 C 0 a score=1104732.000000 s hg38.chr1_KI270760v1_alt 5719 427 + 109528 aagaagctggggctcagaggg--catgaatattacagtaaaaggagcataagcagacatacctgggtttgaatcccaactctgctc------------------------ctcttgagcctca-tcctcttacacaggaggttaggatagagacacctgcctcccaggagggggtgaaatgagagagcagatcgaaagtgtctggtacaaactggacaca--gaaggtgttcaagcaatgataTTTGTGGTCA----------------TTGCCAAGCTCACAGAGGCTGAATTGAACCCATGTCTCCTAACCACAAGCTAAGTGCATATTCTTGGCACCGCCTGCCTTTGAACCAAATGCAAAAACTGAGACAG---GA--CTTGGAACAGTCTCTACATCGGGTTATCATTGCTGCATCCCCAGAGCC-----CTTCTATCAATCCAAAGGGACAAGGGACCAACATCTGAGTCAACTTT s panTro4.chr1 30436606 430 + 228333871 aagaagctggggctcagaggg--catgaatattacagtgaaaggagcataagcagacatacctgggtttgaatcccaactctgctc------------------------ctcttgagcctcg-tcctcttacacaggaggtaaggatagaaacacctgcctcccaggagggggtgaaatgagagagcagatcgaaagtgtctggtacaaactggataca--gaaggtgctcaagcaatgataTTTGTGGTCA----------------TTGCCAaggtcacagaggccgaattgaacccatgtctcctaaccacaagctaagtgcatattcttggcatcacctgcctTTGAACCAAATGCAAAAACTGAGACAGAAGGA--CTTGGAACAGTCTCTACATTGGGTTATCATTGCTGCATCCTCAGAGCC-----CTTCTGTCAATCCAAAGGGATAAGGGGCCAACATCTGAGTCAACTTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025378 430 - 229942017 aagaagctggggctcagaggg--catgaatattacagtaaaaggagcatgagcagacatacctgggtttgaatcccaactctgctg------------------------ctcttgagcctcg-tcctcttacacaggaagtaaggatagagacacctgcctcccaggagggggtgaaatgagagagcagatcgaaagtgcgtggtataggctggacaca--gaaggtgctcaagcaatgataTTTGTGGTCA----------------TTGCCAaggtcacagaggcagaatcgaacccatgtcccctaaccacaagctaagtgcatattcttagcaccacctgcctTTGAAGCAAATGCAAAAACTGAGACGGAAGGA--CTTGGAACGGTCTCTACATGGGGTTATCATTGCTGTATCCCCAGAGCC-----CTTCTATCAATCCAAAGGGACAAGGGGCCAGCATCCGAGCCAACTTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33322539 430 + 229590362 aaaaagctggggctcagaggg--catgaatagtacagtaaaaggagcatgagcagacacacctgggcttggatcccaactctgctg------------------------ctcttgagcctca-tcctcttatccatgaggtgaggatagagacacctgcctcccaagagagggtgaaatgagagagcagattgaaagcatctggtacaaactggacaca--gaaggtgctcaagcaatgataTTTGTGGTCA----------------TTGCCAaggtcacagaggcaggaatgaacccatgtctcctaaccacaagctaagtgcatattcttggcaccatccttcttcgAACCAAATGCAAAAACTGAGACAGAAGGA--CTTGGAACAGTCTCCACATGGGGTTATCATTGCGTCATCCCCAGAGCC-----TTGCTATTAATCCAAAGGGACAAGGGGCCAGCATCTGAACCAAACTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29833632 430 - 227556264 aaaaagctggggctcagaggg--catgaatagtacagtaaaaggagcatgagcagacacacctgggcttggatcccaactctgctg------------------------ctcttgagcctca-tcctcttatccatgaggtgaggatagagacacctgcctcccaagagagggtgaaatgagagagcagattgaaagcatctggtacaaactggacaca--gaaggtgctcaagcaatgataTTTGTGGTCA----------------TTGCCAAGGTCACAGAGGCAGGAATGAACCCATGTCTCCTAACCACAAGCTAAGTGCATATTCTTGGCACCATCCTTCTTCGAACCAAATGCAAAAACTGAGACAGAAGGA--CTTGGAACAGTCTCCACATGGGGTTAGCATTGCGTCATCCCCAGAGCC-----TTGCTATTAATCCAAAGGGACAAGGGGCCAGCATCTGAACCAAACTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32599626 430 + 220367699 AAAAAGCTAGGGCTCAGAGGG--CATGAATAGTACAGTAAAAGGAGCATGAGCAGACACACTTGGGCTTGGATCCCAACTCTGCTG------------------------CTCTTGAGCCTCA-TCCTCTTATCCATGAGGTGAGGATAGAGACACCTGCCTCCCAGGAGAGGGTGAAATGAGAGAGCAGATTGAAAGTATCTGGTACAAACTGGACACA--GAAGGTGCTCAAGCAATGATATTTGTGGTCA----------------TTGCCAAGGTCACTGAGGCAGGAATGAACCCATGTCTCCTAACCACAAGCTAAGTGCATATTCTCGGCACCATCCTTCTTTGAACCAAATGTAAAAACTGAGACAGAAGGA--CTTGGAACAGTCTCCACATGGGGTTATCATTGTGTCATCCCCAGAGCC-----CTGCTATTAATCCAAAGGAACAAGGGGCCAGCATCTGaaccaaactg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28114867 430 - 130588469 aaaaagctggggctcagaggg--catgaatagtacagtaaaagtagcatgagcagacacacctgggcttggatgccaactctgctg------------------------ctcttgagcctca-tcctcttatccatgaggtgaggatagagacacctgcctcccaggagagggtgaaataagagagcagattgaaagcatctggtacaaactggacaca--gaaggtgctcaagcaatgataTTTGTGGTCA----------------TTGCCAAGGTCACAGAGGCAGGAATGAACCCATGTCTCCTAACCACAAGCTAAGTGCATATTCTTGGCACCATCCTTCTTCAAACCAAATGCAAAAACTGAGACAGAAGGA--CTTGGAACAGTCTCCACATGGGGTTATCACTGCGTCATCCCCAGAGCC-----CTGCTATTAATCCAAAGGGACAAGGGGCCAGCATCTGAACCAAACTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64567459 423 + 155834243 AAGAAGCTGGGGCTcagaggg--catgaat-----agtaaaaggagcatgagcagacacacctgggtttgaatcccaatgctgctg------------------------ctcttgagcctca-tcctcttacacatcaggtgaagatagagacacctgccttccaggagagggtggagtgagagagcatatcggaagtgtctggtacaaagtggacaca--gaaggtgctcaagcagtggtatctGTGGTCA----------------TTGCCAAGGTCACAGAGG-AGGATGAAACTCATATCTCCCAACCACAAGCTAAGTGCATATTCGTGGCACTGCCTGCCTTTGAGCCAAATGCAAAAACTGAGAAGGATGGA--CTTGG-ACAGTCTCTACATGGGGTTATCATTGCTGCACCTCCAGAGGC-----CTGCTGTGAATCCCAAGGGACAAGGGGCCAGCATCTGAGCCAACCTT i calJac3.chr7 I 130 C 0 s canFam3.chr2 14964793 465 - 85426708 aagatactgagtctcagagagctcgtgtgtaggacagtaaaaggaacacaagcaggtacacctgggttcaaatcccagctctgctgctgggtgagcttgaccagtctagtctcttgagcttcagccctctcgtgtatcaaataaggacagaaacaccggcctcagagggcaagatggaatgagagtgcagatgggaagcgtccggtacaagctggacacacggtaggtgctcaagcagtgataTTTTGAGTCCTTATTAGGAAAGTCATTTGTCAAGGTCACAGAGGCAGAATTGAACTCAC-TCTCCTAACCACAAATTAAGT--------------CCACCTGCCTTCGAACCACTTGCCCACACCAAGGAGGAAAGAGTTTTAGATTCGTCTCCACATGGGGTTATCATTGCTGGGTCCCCAGAAGCCTGTGCTGCCACGAATCCAAAAGAGGCAGGGCCTCACA--CGAGCCAACTTG i canFam3.chr2 C 0 C 0 a score=59869.000000 s hg38.chr1_KI270760v1_alt 6146 21 + 109528 AAAAATAATATAGCCCACAGA s panTro4.chr1 30437036 21 + 228333871 AAAAATAATATAGCCCACAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025808 21 - 229942017 AAAAATAATATAGCCCACAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 440707 21 - 28733288 AAAGGTAGCGTGGCACATTCA i nomLeu3.chr24 N 0 C 0 s rheMac3.chr1 33322969 21 + 229590362 AAAAATAATAGAGCCCACAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29834062 21 - 227556264 AAAAATAATAGAGCCCACAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32600056 21 + 220367699 aaaaataatagaacCCACAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28115297 21 - 130588469 AAAAATAATAGAGCCCACAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64567882 21 + 155834243 ATAAATAACATAGCCCACAGA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14965258 21 - 85426708 AAGAATAATAAAACTTGCAGA i canFam3.chr2 C 0 C 0 a score=1888958.000000 s hg38.chr1_KI270760v1_alt 6167 523 + 109528 AGTGAATGGCTGTCAGCCTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCCGGGCATCCA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CAGGGAAAACTTGCTGATGACAAGGATGAGAAGACCCCTCCTCCACC----CAGGT----CTTTGGGAAAGTTAATCCAGCTTCTAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAATGCTCTCTGGGAGGTGGGTCCCG-CCTTCATCTGCTACAG---TGTCATTAAGACAGAAAACATTAGCTCCATGGGGCTCCCGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCA-GAAGGGCTTCTCAAGCCTTAACCCTCTCCTTCCCAGCACAGGCCAAGGCCTCAGCCAGACGGCTCTGCAGATCACTGGCCTGGGCTCCCAGGGACCCT---------------GGCTTTTCACAGCCTTGG---GAGCAAGTGAATGTGAGGAAAGAGGGAAGATAGAGGGCA s panTro4.chr1 30437057 523 + 228333871 AGTGAATGGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCTGGGCATCCA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CAGGGAAAACTTGCTGATGACAGGGATGAGAGGACCCCTCCTCCACC----CAGGT----CTCTGGGAAAGTTAATCCAGCTTCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAATGCTCTCTGGGAGGTGGGTCCCG-CCTTAATCTGCTACAG---TGTCATTAAGACAGAAAACATTAGCTCCATGGGGCTCCCGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCA-GAAGGGCTTCTCAAGCCTTAACCCTCTCCTTCCCAGCACAGGCCAAGGCCTCAGCCAGACGGCTCTGCAGATCACTGGCCTGGGCTCCCAGGGACCCT---------------GGCTCTTCACAGCCTGGG---GAGCAAGTGAATGTGAGGAAAGAGGGAAGATAGAGGGCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30025829 523 - 229942017 AGTGAATGGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCTCAGCTTGGTATCTGGGCATCCA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CAGGCAAAACTTGCTGATGACAAGGATGAGAGGACCCCTCCTCCACC----CAGGT----CTCTGGGAAAGTTAATCCAGCTTCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAACGCTCTCTGGGAGGTGGGTCCCG-CCTTAATCTGCTACAG---TGTCATTAAGACAGAAAACATTAGCTCCATGGGGCTCCTGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCA-GAAGGGCTTCTCAAGCCTTAACCCTCCCTTTCCCAGCACAGGCCAAGGCCTCAGCCAGACGGCTCTGCAGATCACTGGCCTGGGCTCCCAGGGACCCT---------------GGCTCTTCTCAGCCTGGG---GAGCAAGTGAATGTGAGGAAAGAGAGAGGATAGACGGCA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 440728 526 - 28733288 GGCAGGTAGCTGCCGACTTGTGGTCCACTGGGACTGTCAGCTCTCTCTTGTGCTAAGCAAAGCACTAGCCTGTCTCAATGTCTTCTCAGACTGG-------------------CCTCTCCTGGAGCTAATGTCAGAGGAACCGGGCAGGATTTGCTGATGGCAGGAATAAAAAGACCCTTCCCCCACCCAGTCAGGT----CTCTGGGAAAGTTATTCCAGCTGTCAACCCAGGCCATCCTGGGTAATGAATGGCCTCTCTTCAATGTCAGCTGGAAGATGGGTCCGT-CTTTAATGTGCTGCAG---TGTCATTAAGAGAGAAAACATTAACTCCATGGGGCTCCTGACGGCCTTCAGAAACTGCAAGTTAAACACTAACCAGGAAGGGCTGCTCAAGCCTTAACCCTCCCCTTCCCAGCACAGGCCAAGGTGTCAGACACACAGCTCTGCAGATCACTGACCTGGGCCCCCAGGGACCCT-GGGTCCTGTTTCCAGGCTCTTCTCAGACTGGT---GAGCAAGAAGATATGAGGAAAGAGGGATGACAGAGGGCA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33322990 538 + 229590362 AGTGAACAGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCTGGGAATCAA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CACGCAAAACTTGCTGATGACAAGGATGAGAGGACCCCTCCTCCACC----TAGGT----CTCTGGGAAAGTTAATCCAGCTGCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAATGCTCTCTGGGAGATGGGTCCTG-CCTTAATCTGCTGCCG---TGTCCTTAAGAGAGAAAACATTTGCTCCATGGGACTCCTGATGGCCTTCAGAAACTGCAAGTTAACCACTAACCAGGAAGGGCTGCTCAAGCCTTAACCCTCCCCTTCCCAGCACAGGCCAAGGCCTCAGCCAGATGGCTCTGCAGATCACTGGCCTGGGCTCCCAGGGACCCT-GGGTCCTATTTCCAGGCTCTTCTCAGCCTGAG---GAGCAAGTGGATGTGAGGAAAGAGGGAAGATAGAGGGCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29834083 538 - 227556264 AGTGAACAGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCTGGGAATCAA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CACGCAAAACTTGCTGATGACAAGGATGAGAGGACCCCTCCTCCACC----TAGGT----CTCTGGGAAAGTTAATCCAGCTGCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAATGCTCTCTGGGAGATGGGTCCTG-CCTTAATCTGCTGCCG---TGTCATTAAGAGAGAAAACATTTGCTCCATGGGGCTCCTGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCAGGAAGGGCTGCTCAAGCCTTAACCCTCCCCTTCCCAGCACAGGCCAAGGCCTCAGCCAGACGGCTCTGCAGATCACTGGCCTGGGCTCCCAGGGACCCT-GGGTCCTATTTCCAGGCTCTTCTCAGCCTGAG---GAGCAAGTGAATGTGAGGAAAGAGGGAAGATAGAGGGCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32600077 538 + 220367699 AGTGAACGGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCTGGGAATCCA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CACGCAAAACTTGCTGATGACAAGGATGAGAGGACCCCTCCTCTACC----TAAGT----CTCTGGGAAAGTTAATCCAGCTGCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTTTTTAATGCTCTGTGGGAGATGGGTCCTG-CCTTAATCTGCTGCTG---TGTCATTAAGAGAGAAAACATTAACTCCATGGGGCTCCTGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCAGGAAGGGCTTCTCAAGCCTTaacccttcccttcccagcacagGCCAAGGCCTCAGCCAGACAGCTCTGCAGATCACGGGCCTGGGCTCCCAGGGACCCT-GGGTCCTGTTTCCAGGCTCTTCTCAGCCTGGG---GAGCAAGTGAATGTGAGGAAAGAGGGAAGATAGAGAGCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28115318 538 - 130588469 AGTGAACGGCTGTCAGCTTGTGGCCCACTGGGACTGGGAGATCTTTCTCATGTTGAGCTGAATCCCAGCCTGCATCAGTGTTCTCCCAGCTTGGTATCTGGGCATCCA-TGCTCACCTCCCAAATCTTGGACCATGGGGA-CACGCAAAACTTGCTGATGACAAGGATGAGAGGACTCCTCCTCCACC----TAGGT----CTCTGAGAAAGTTAATCCAGCTGCCAGGCCAGGCCATTCTGGGTAATGGAT-GCCTCTCTTCAATGCTCTCTGGGAGATGGGTCCCG-CCTTAATCTGCTGCAG---TGTCATTAAGAGAGAAAACATTTGCTCCATGGGGCTCCTGATGGCCTTCAGAAACTGCAAGTTAAACACTAACCAGGAAGGGTTGCTCAAGACTTAACCCTTCCCTTCCCAGCACACGCCAAGGCCTCAGCCAGATGGCTCTGCagatcactggcctgggctcccagggaccct-gggtcctatttccaggctctTCTCAGCCTGAG---GAGCAAGTGAATGTGAGGAAAGAGGGAAGATAGAGGGCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64567903 523 + 155834243 AGTGAGTGGCCATCagcttgtggcccactgagactgggagatctttctcatgttgagctgaatcccagc-----------------cagTTTGGTATATGGGCATCCA-TGCTCACCTCCCAAATCTTGGACCATGCGGA-CAGGCAAAACTTGCTGATGGCAAGGATAAGAGGACCCCTCCTCCACC----CAGCT----CTCTGGGAAGGTTAATCCAGCTGCCAGGCCAGACCATTTCGGATAATGGAT-GCCTCTTTTTAATGCTCTCTGGGAGATGGGTCCCG-CCTTAATCTGCTGCAGCACCGCCTTTAAGAGAGAAAACATTTTCTCCATGGGGTTCCCAATGGCCTTCAGAAACTGCAAGTTAAACACTAACCAGGAAGGACTGCTCAAGCCTTAACCCTCCCCTGCCCAGCACAGGCCAAGGACTCAGCCAGAT-GCTCTGCACATCACTAGCCTGGGCTCCCAGGGACCCT-GGATTCTGCTTCCAGGCTCTTCTCGGCCTGGG---GAGCAAGTGAATGTGAGGAAAGAGGGATGACTGAGGGCA i calJac3.chr7 C 0 C 0 s mm10.chr4 25387152 525 - 156508116 AGTGAATGGCTGCCA----GTGGTCCACAGGGCTGGGCAGATCTTTCTCACATGAAGCTGAA-ACCAACCTGTGTCCATGACCGTGCAGTCTGTCATCTTGGCACACA-TTACCACTCCCC------TGGCCAAAGAAAC-CTGGCCAAGCTTGTGGCCAGCAGGGCTGGGAGAGCCAGATCCTCACA----CAGGCTCAACTCTAGGAGAGTTATTCTAGCTACCAGGCTAGACCACCACTGGTAATGAAT-GCTGCTCTTTAATGCTACCGTGGAGACGCGCCCCATCCTTAATCTGCTGCAG---TGTTCTTAGGAGAGAAAATGTTTGCTCCA-GGAACTCCCAA-GGCCTTTGGAAACTGCAAGATCAACACTAACTG-CCAAGGCAGCTCCAGCCTTAA-CCTCCCCTGCCCAGCCCAGGCTGGGGGCTCAGAGAGGTAGCTCTGTGGGGCACTTGTCTGGA-GCTCTGGAACCCT-GGGTCCTGTTTCCAGCCTCTTCT-GGCCTAGA---GAGACAGTAGGTGGAGAGAAAGAAAGA-GAAGGGGGGCA i mm10.chr4 N 0 I 1002 s canFam3.chr2 14965279 502 - 85426708 GGTGACTGA-------------------TGGGACCGGGGGGTCATTCTCCTGTTGAGCTAAACCTCAGCCTGTGTCCATGTCCTCTCAGCCTCGTGTCTGGGCATGTGCCCCTCACCCCTCAGAGTCCTGGCCA----------------------------AAGGCTGAAAGAATCCATTCCTCCCCTGGGCAGGT----CTCTGGGAAAGTTACTCCAGCTGCCAGGCCAGGCCATTCTGGGTAATGGATGGCGTCTCCTTAATGCTCTCTGGGAGACGGGCCCCT-CTTTAATCTGCTGCAG---TGTCATTAAGAGAGAAAACGTTTGCTCCATGGGGCTCCTGATGGTCTTTAGAAACTGCAAGTTAAACACCAACCAGGAAGGGCTGCTCCGGCCTTAACTCTCCCCTTCCCGGCACAGGCCCAGGCCTCAGGCCAATGGGGCCGCAGATCTCTGGCCTGGACTTTCAGGAGCCCTGGGGTCGGGTTTGTGGGCTCTTCTCAGCCTGGAGGTGAGTGGGTGGGCGTGAGGGCAGAGGGAGGCCAAAGGGAG i canFam3.chr2 C 0 C 0 a score=5523215.000000 s hg38.chr1_KI270760v1_alt 6690 1941 + 109528 GAGAAGAATCCTTGAGGCTCTTGATCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCCAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CTGGGTTGGGG--CTGGTGACTTTGGGCCACTCCCTTGACCTCTCTGTTTGCTGGATTCCTACAGGGTGGGGGCTGGATGG--------------GCTCCATTCCTC-----------------CAGGTAGAGCCTGGTGGTCTTCTCCAAGAGGGGTGGCGTGTCCTCAA-CCCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAGGG-CAGAGGGGGAGCAGCTGACCTGGATGAGTTGGCAGAGGTG-GGGAGCCCCTGGtatcaagcgtctctggatgcccagcactgtgctggggctccacacatacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtgatgttccccccacttcatagctgacagcacggaggctccgcat-acagagggacctgtccaggtcgaactgagatctgtctgattccaaacccaaactctttccCATCAGCCATTGGCAGAGAGCACAAGAGAGGACGTGGCCTCACCTTGGCCCCTCTCC-TC-------------TTTGCACAGG-CTGTCTCTCCTCCTCACCTG-TTTTCCCCTCCTCTATTCAATTCCTGCCCAGCCCAAGGCAAGCCTCCTCCAGGAATTCCTCCTTGATGTCTGACAGCCAAACCCCAAGCGTGTTACCCAGCGAGACTGCTGGTTGTTCAATTTGCCAACACAGCTTTAGAGTTTGCTGCAGTGAGTGCAGACGCAAACATGAGCTCATTTCATTCTCTCACCAGGCTCACGAGTATTTGCTGGGCACTGACTTGGAGCCAGGTGCTGC-AGGGCTGCAGAGGGTACAGGAACAAACATGCACTGAGCGCCTGCAGATGCCCCTCCCGTGCTCAGGGGAGCCCACATGTCACCCTAGGcaggatccttgccccatttgacagatgaagaaactgaggcccagagaagaggaggaagctgctcagggtcactcagtgagccaatggctgggattcaacactaggccagtccccagatccaCACCCACCGCCCCCCGACACTCCCTGCCCCAGAACCTTTTAAGCTCCCACTGCTGGGGCAGGACTGGCCCTTTGCCCTGGAGC-CTCTGGTCATGCAG-GTGGGCTCTGTAGCCACAGCCACGCAGGGAGGGGAG--GGACAACGTGCAG------CCGGC---------------AGGATCCTATGTCACCCCTCGGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------ATCCTCCAGCCTGTTCCTCCACCTGGGGGCTCAAA---GCCCCTGACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCTGGCT-----GGAGAAGCAACAGAACATAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGACTGATCCCTCATCAGCTCCATCCTCAGAGAAATATGAGAGGACCCAGAGGGTGGAGGCTGGTCCT-AGCCTTGCGgggacatgggcctggccctgggactggtacaggTTGATAAACCCCATTCCTTGGAGGTGGTGGCAACAT-------------GGCTCAGCATGAAAG-GTGGGGTCCAGGTGTG--------TGTGCATGTGCATGTGAGGTCAGCAAAGCCCTCTCTGCTCCCCCAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTAGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGGAGGCCTCCCTTGATAATG---AGAATCACCTTATGAACTCCCCTGGGCTGCCGCCTCCCAGACTTTATTTTTTCTGACTCAGTCTCAATTTGAAATAAGGAGAGAGAGGCTGAG-------AGAGAGAAA-----------A------ATTCCAAGCTGTCACCTTTGGTAGATGCTCCAGA---AAA-GGagtctaagtctcacttgtcacaggcagggaaaccgaggctctaagagg s panTro4.chr1 30437580 1927 + 228333871 GAGAAGAATCCTTGAGGCTCTTGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCAAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CTGGGTTGGGG--CTGGTGACTTTGGGCCACTCCCTTGACCTCTCTGTTTGCCAGATTCCTACAGGGTGGGGGCTGGATGG--------------GCTCCATTCCTC-----------------CAGGTAGAGCCTGGTGGTCTTCTCCAAGAGGGGTGGCGTGTCCTCAA-CCCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACATGTGACCTGGTAGGGAGGCCACCTGTAGGG-CAGA-GGGGAGCAGCTGACCTGGATGAGTTGGCAGAGGTG-GGGAGCCCCTGGtatcaagcgtctctgggtgcccagcactgtgctggggctccacacatacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtgatattccccccacttcatagctgacagcacggaggctccgaat-acagagggacctgtccaggtcgaaccgagatctgtctgattccaaacccaaactctttccCATCAGCCATTGGCAGAGAGCACAAGAGAGGACGTGGCCTCACCTTGGCCCCTCTCC-TC-------------TTTGCACAGG-CTGTCTCTCCTCCTCACCTG-TTTTCCCCTCCTCTATTCAATTCCTGTCCAGCCCAAGGCAAGCCTCCTCCAGGAATTCCTCCTTGATGTCTGACAGCCAAACCCCAAGGGTGCTACCCAGCGAGACTGCCGGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCTGCAGTGAGTGCAGACGCAAACATGAGCTCATTTCATTCTCTCACCAGGCTCACGAGTATTTGCTGGGCACTGACTTGGAGCCAGGTGCCGC-AGGGCTGCAGAGGGTACAGGAACAAACATGCACTGAGCACCTGCAGATGCCCCTCCCGTGCTCAGGGGAGCCCACATGTCaccctaggcaggatccttgccccatttgacagatgaagaaactgaggcccagagaagaggaggaagctgctcagggtcactcagtgagccaatggctgggattcaacactaagccagtccccagatccacacccaccgcccccccacactccctGCCCCAGAACCTTTTAAGATCCCACTGCTGGGGCAGGACTGGCCCTTTGCCCTGGAGC-CTCTGGTCATGCAG-GTGGGCTCTGTAGCCCCAGCCACGCAGGGAGGGGAG--GGACAACGTGCAG------CCGGC---------------AGGATCCTATGTCACCCCTCGGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------ATCCTCCAGCCTGTTCCTCCACCTGGGGGCTCAAA---GCCCCTGACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCTGGCT-----GGAGAAGCAACAGAACATAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGACTGATCCCTCATCAGCTCCATCCTCAGAGAAATATGAGAGGACCCAGAGGGTGGAGGCTGGTCCT-AGCCTTGGGGGGACACGGGCCTGGCCCTGGGACTGGTACAGGTTGATAAACCCCATTCCTTGGAGGTGGTGGCAACAT-------------GGCTTAGCATGAAAG-GTGGGGTCCAGGTGTG--------TGTGCATGTGCATGTGAGGTCAGCAAAGCCCTCTCTGCTCC-------------CCCAGGCCCTGGGGCTAAGCTAGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGGAGGCCTCCCTTGATAATG---AGAATCACCTTATGAACTCCCCTGGGCTGCCGCCTCCCAGACTTTATATTTTCTGACTCAGTCTCAATTTGAAATAAGGAGAGAGAGGCTGAG-------AGAGAGAAA-----------A------ATTCCAAGCTGTCACCTTTGGTACATGCTCCAGA---AAA-GGagtctaagtctcacttgtcacaggcggggaaactgaggctctaagagg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30026352 1937 - 229942017 GAGAAGAATCCTTGAGGCTCTTGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCCAGAGCTGGTTAGAAAGCAGAGCACTTAGAGG-CTGGGTTGGGG--CTGCTGACTTTGGGCC-CTCCCTTGACCTCTCCGTTTGCCGGATTCCTACGGGGTGGGGGCTGGATGG--------------GCTCCATCCCTC-----------------CAGGTAAAGCCTGGTGGTCTTCTCCAAGAGAAGTGGCGTGTCCTCAA-CCCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAGGG-CAGA-GGAGAGCAGCTGACCTGGATGAGCTGGCAGAGGTG-GGGAGCCCCTGGtatcaagcgtatttgggtgcccagcactgtgctggggctccacacatacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtgacgttccccccgcttcatagctgacagcacggaggcttcgaat-acagagggacctgtccagttcgaatccagatctgtccaattccaaactcaaactctttccCATCAGCCATTGGCAGAGAGCACAAGAGAGGATGTGGCCTCACCTTGGCCCCTCTCC-Tc-------------tttgcacaag-ctgtctcccctcctcgcctg-ttttcccctcctctattcaattcctgcccagcccaaggcaagcctcctccaggaattcctccttgaTGTCTGACAGCCAAACCCCAAGGGTGCTACCCAGCGAGACTGCTGGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCTGCAGTGAGTGCAGATGCAAACATGAGCTCATTTCATTCTCTCACCAAGCTCATGAGTATTTGCTGGGCACTGACTTGGAGCCAGGTGCCGC-AGGGCTGCAGAGGGTACAGGAACAAACATGCACTGAGCACCTGCGGATGCCCCTCCTGTGCTCAGGGGAGCCCACATGTCACCCTAggcaggatccttgccccatttgatagatgaggaaactgaggcccagagaagaggaggaagctgctcagggtcactcagtgagccaatggctgggattcaacactaggccagtccccagatccacacctgcc-cctccccatactccctGCCCCAGAACCTTTTAAGCTCCCACTGCTGAGGCAGGACTGGCCCTTTGCCCTGGAGC-CTCTGGTCATGCAG-GTGGGCTCTGTAGCCACAGCCACGCAGGGACGGGAG--GGACAACATGCAG------CCGGC---------------AGGATCCTATGTCACCCCCCGGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------ATCCTCCAGCCTGTTCCTCCACCCGGGGGCTCAAA---GCCCATGACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCTGGCT-----GGAGAAGCAACAGAACATAAATTAATGCATCTTCAG--TTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGACTGATCCCTCATCAGCTCCATCCTCAGAGAAATATGAGAGGACCCAGAGGGTAGAGGCTGGTCCT-AGCCTTG-GGGGACATGGGCCTGGCCCTGGGACTGGTACAGGTTGATAAACCCCATTCCTTGGAGGTGGTGGCAACAT-------------GGCTCAGCATGAAAG-GTGGTGTCCAGGTGTG--------TGTGCATGTGCATGCGAGGTCAGCAAAGCCCTCTCTGCTCCCCCAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGCAGGCCTCCCTTGAAAATG---AGAATCACCTTATGAACTCCCCTGGGCCGCCGCCTCCCAGACTTTATTTTTTCTGACTCAGTCTCAATTTGAAATAAGGAGAGAGAGGCTGAG-------AGAGAGAAA-----------A------ATTCCAAGCTGTCACCTTTGGTAGATGCTCCAGA---AAA-AGagtctaagtctcacttgtcacaggcagggaaactgcggctctaagagg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 441254 1987 - 28733288 GAGAAGAATCCTTGAGGCTCTCGGTTCAGGTGTTTGTAGACAGAGGC--CCCATCCACTCCAGGGCTGGTTAGAGAGCAGACCACTTAGAGG-CCGGGTTGGGG--CTGGTGACTTTGGGCCACTCCCTCGACCTCTCTGTTTGCCAGGTTCCTGCCGGGTGTGGGCTGGATGG--------------GCTCCACCCCTC-----------------CAGGTAGAACACAGCGGTCTTCTCCAAGATGGGTGGCGTGTCCTCAA-ACCCCCAGGTCCCTGCACCAAAGCCCACTCCCTGCTCAGACCACACGTGACCAGATGGGGAGGCCACCTGTGGGG-CAGA-GGGGAGCAGCTGACCTGGATGAGCTGGCAGAGGGGCAGGAAACCCGGGTACAgagcgtccctgggtgcctggcactgtgctggggctgcacacacacaaaatgcctgtgccagcctcatgaccaccctgtgaggagggggtgccatttcccccacttcatagctgacagcatggagcctccgagt-tcagagggacctgtccaggTTGAACCCAAATCTGCCCTATTCCAAACCCAAACTCCTCCCCATCAGCCTTTGGTAGGGAGTATGAAAGAGGGTGCGGCCTCACCTTGGCCCCTCTCC--C-------------TTTGCACACG-CTGTCTCCCCTCCTTGACTG-TCTTCCTCTCTTCTATCCAATTCGTGCCCAATCTAAGGCAAG---------------CCTCCCTGATGTCTGACAGCCAAATCCCGAGGGTGCTATCCAGTGAGGACTCTGGTTGTTCAGTTTCCCAACACGGCTTTAGACTGTGCTGCCGTGAGTGCAGACGCAAGCATGAGCTCGTTTCATTCTCTCACCAGGCTCTTAGGTATTTGCTGGGCGTTGACTTGCAGCCAGGTGCCAT-GGGTCTGCAGACAGGATGGGAATAAATATGCACTGAGTCCTTGCGGATGCCCCTCCTGTGCCCAGGGGAGCCCACGTGTCCTCCCAGGCAGGCTCCTTGccccatttagcagatgaggaaactgaggctcagagagggagaggaagctgctcagg--------gtgaaccagtggctgcgattcaacaccaggccagtcccaaaatccgtgcccGCC-CTTCCCCACATTCCCTGCCCTGGTACCCTTTAAGCTCCCTCTGCTGGGGCAGGACTGGCCCTTTGCTCTGGAGC-CTCCTGTTGCACAGTGGGGGCTCAGCAGCCACAGCCATGCAAGGAGGGACG--GAACTA----------------GC---------------AGGGCCCTATGTCACCCCTCAGGAGGATAGagtgaggcacccagggtgcaaagttctgaagg---gacgctcacc-----------catagggccgggcaggtgccgactctgcCTAGTGGAAGCTCTCAGCCCTCTATTTACCCTCCAGTCTGTGGCTCCACATGGGGAGTCCAG---GCCCCTTGGCTGTATACTCGCCTGTCCCCT----------TTCTCCAAATTGTCCCCTGGGCCTGTCT-----GT---AGCCACAGGCTGTGGATTAACCTGTCTTTAGGCTTCTGGCTCCAGACGCTCCGTCTCCTGCCTTCCTGGGCTGGTCCCTCGCCAGCTCTGTCCTCAGAGAAATATGGATGGA-CCAGATGGTGGCAGCTGGTTCTGGGCCATGGGAGGGTGCAGGCCCAGCCCTGGGGCTGGCGCTGGTTGATAAATCCCATCTCTTTGAGCTAGTGGTGGCCTTTCCTGCAGATGAGTCTCAGCACAAAAGTGGGGTGTACCAGTGTG--------TCTGC--GTACCTGCGGGGGCAAGGAGTCCCTTTGTGTTCCC---AGACCTGGATTTTATCTCTGGGTCCATCCTGGGGCTGCTGGAGTGAATGTCCACTTTGCTGATAG-AAG-----------CTAATAATA---AGTATCACCACGTGACCCCATTTGGGCTGCC---------------------CCGGATCAATTTCAAGTTgaaagagaaagtgaaaagcagagaagagaaagagaaaaagaGGAAAAGTTa------atcctaagaggccacaatcagaaagtcctccaga---aaactgagtctaaatctc---ttttatagatggggaaactgaggctctgagaag i nomLeu3.chr24 C 0 I 3963 s rheMac3.chr1 33323528 1928 + 229590362 GAGAAGAATTCTTGAGGCTCTCGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTATCCCAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CCAGGTTGGGG--CTGGTGACTTTCGGCCACTCTCTTAACCTCTCTGTTTGCCGAATTCCTACAGGGTGGGGGCTGGACGG--------------GCTCCATCCCTC-----------------CAGGTAAAGCCTGGTGATCTTCTCCAAGAGAGGTGGCATGTCCTCAATCCCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAGGG-CAGA-GGGAAGCAGCTGACCTGGATGAGCTCGCAGAGGTG-GGGAGCCCCTGGtgtcaagcgtctctgggtgcctggcgctgtgctggggctccacacacacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtggtgttcctcccgcttcatagctgacagcacggaggctccgagt-gcagaggga---gtccaggtcaaacccagatctgtctgattccaaacccaaactctttccCATCAGCCACTGGCAGAGAGCACAAGCGAGGGCGTGGCCTCACCTTGGCCCCTCTCC-Tc-------------tttgcacagg-ctgtctcccttcctcgcctg-ttttcccctcctctattcaactcctgcccagcccaaggcaagactcctccaggaagtcctccttgaTGTCTGACAGTCAAACCCCAAGGGTAATACCCAGCGAGGCTGCTGGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCCGCAGTGAGTGCAGATGCAAACATGAGCTAATTTTATTCTCTCACCAGGCTCaccagtatttgctgggcactgacttggagccaggggctgc-agggttgcagagcgcacaggaacaaacatgcactgagcccctgcagatgcccttcctgtgctcagaggagcccacatgtaaccttaggcaggatccttcccccatttggcagatgaggaaactgaggcccagagaagaggaggaagctgctcagggtcacccagtgagccggtggctgggattcaacactaggcaagtccccagatccacacccacc-cctccccacactccctGCCCCAGAACATTTTAAGCTCTCACTGCTGGGGCAGGACTGGCCCTTTGCCCTGGAG--CTCTGGTCACTCAG-GTGGGCTCCGTAGCCACAGCCACGCAGGGAAGGGAG--TGACAGGGTGCAG------CTGGC---------------AGGATTCTATGTCACCCCTCCGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------AGCCGCCAGCCTGTTCCTCCACCTGGGGACTCAAA---GCCCCTCACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCCGGCT-----GGAGAAGCAACAGAACACAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGGCTAATCCCTCATCAGCTCCATCCTCAGAGAAATATGAAAGGACCCAGAAGGTGAAGGCTGGTCCT-AGCCTTG-GGGGTCATGGGCCTGGCCGTGGGACTGGTGCGGGTTGATAAACCTAATTCCTTGGAGGTGATGGTGACAT-------------GGCTCAGCATGAAAG-ATGGTGTCCAGGTGTG----------TGCATGTGCATGTGAGGTCAGCAAAGCCCTCTCTGCTCCCGCAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGGAGGCCTCCCTTGGTAATGAGCAGCATCACCTTACAAACTCCCCTGGGCCGCCACCTCTCAGACTTTATTTTTTCTGACTCAGTCTCAACTCGAAACAAGGAGAGAGGGGCTGAG-------AGAGAGAAA-----------A------GCTCCAAGCTGTCACCTTTGGTAGATGCTCAAGA---AGA-GGAGCAt--------cttgttacaggtggggaaactgaggctctaagagg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29834621 1928 - 227556264 GAGAAGAATTCTTGAGGCTCTCGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTATCCCAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CCAGGTTGGGG--CTGGTGACTTTGGGCCACTCTCTTAACCTCTCTGTTTGCCGAATTCCTACAGGGTGGGGGCTGGACGG--------------GCTCCATCCCTC-----------------CAGGTAAAGCCTGGTGGTCTTCTCCAAGAGAGGTGGCATGTCCTCAATCCCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAGGG-CAGA-GGGAAGCAGCTGACCTGGATGAGCTGGCAGAGGTG-GGGAGCCCCTGGtgtcaagcgtctctgggtgcctggcactgtgctggggctccacacacacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtggtgttcctcccgcttcatagctgacagcacggaggctctgagt-gcagaggga---gtccaggtcaaacccagatctgtctgattccaaacccaaactctttccCATCAGCCACTGGCAGAGAGCACAAGCGAGGGCGTGGCCTCACCTTGGCCCCTCTCC-Tc-------------tttgcacagg-ctgtctcccttcctcgcctg-ttttcccctcctctattcaactcctgcccagcccaaggcaagactcctccaggaagtcctccttgaTGTCTGACAGTCAAACCCCAAGGGTAATACCCAGCGAGGCTGCTGGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCCGCAGTGAGTGCAGATGCAAACATGAGCTAATTTTATTCTCTCACCAGGCTCACCAGTATTTGCTGGGCACTGACTTGGAGCCAGGGGCTGC-AGGGTTGCAGAGCGCACAGGAACAAACATGCACTGAGCCCCTGCAGATGCCCTTCCTGTGCTCAGAGGAGcccacatgtaaccttaggcaggatccttcccccatttggcagatgaggaaactgaggcccagagaagaggaggaagctgctcagggtcacccagtgagccggtggctgggattcaacactaggcaagttcccagatccacacccacc-cctccccacactccctgccCCAGAACATTTTAAGCTCTCACTGCTGGGGCAGGACTGGCCCTTTGCCCTGGAG--CTCTGGTCACTCAG-GTGGGCTCCATAGCCACAGCCACGCAGGGAAGGGAG--TGACAGGGTGCAG------CTGGC---------------AGGATTCTATGTCACCCCTCCGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------AGCCGCCAGCCTGTTCCTCCACCTGGGGACTCAAA---GCCCCTCACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCCGGCT-----GGAGAAGCAACAGAACACAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGGCTAATCCCTCATCAGCTCCATCCTCAGAGAAATATGAAAGGACCCAGAAGGTGAAGGCTGGTCCT-AGCCTTG-GGGGTCATGGGCCTGGCCGTGGGACTGGTGCGGGTTGATAAACCTAATTCCTTGGAGGTGATGGTGACAT-------------GGCTCAGCATGAAAG-ATGGTGTCCAGGTGTG----------TGCATGTGCATGTGAGGTCAGCAAAGCCCTCTCTGCTCCCGCAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGGAGGCCTCCCTTGATAATGAGCAGCATCACCTTACAAACTCCCCTGGGCCGCCACCTCTCAGACTTTATTTTTTCTGACTCAGTCTCAACTCGAAACAAGGAGAGAGGGGCTGAG-------AGAGAGAAA-----------A------GCTCCAAGCTGTCACCTTTGGTAGATGCTCAAGA---AAA-GGAGTAt--------cttgttacaggtggggaaactgaggctctaagagg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32600615 1926 + 220367699 GAGAAGAATTCTTGAGGCTCTTGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCCAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CCAGGTTGGGG--CTGGTGACTTTGGGCCActctcttaacctctctgtttgCCAGATTCCTACAGGGTGGGGGCTGGATGG--------------GCTCCATCCCTC-----------------CAGGTAAAGCTTGGTGGTCTTCTCCAAGAGGAGTGGCGTGTCCTCAATCGCCCCAGGTCCCTGCACCAAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAAGG-CAGA-GGGAAGCAGCTGGCCTGGATAAGCTGGCAGAGGTG-GGGAGCCCCTGGTATCAAGCGTCTCTGGGTGCCCGGCACTGTGCTGGGGCTCCACACATACAAAATGCCTGTTCCAGCCTCACAACCACCCTGTGGGGAAAGGGTGGTGTTCCTCCCGCTTCATAGCTGACAGCACGGAGGCTCTGAGT-GCAGAGGGA---GTCCAGGTCGAACCCAGATCTGTCTGATTCCAAACCCAAGCTCTTTCCCATCAGCCATTGGCAGAGAGCACAAGCGAGGGCGTGGCCTCACCTTGGCCCCTCTCC-TC-------------TTTGCACAGG-CTGTCTCCCCTCCTCGCCTG-TTTTCCCCTCCTCTATTCAACTCCTGCCCAGCCCAAGGCAAgactcctccaggaagtcctccttGATGTCTGACAGTCAAACCCCAAGGGTGCTACCCAGCGAGGCTGCTGGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCCGCAGTGAGTGCAGGTGCAAACATGAGCTAATTTTATTCTCTCACCAGGCTCACCAGTATTTGCTGGGCACTGACTTGGAGCCAGGGGCTGC-AGGGTTGCAGAGCGCACAGGAACAAACATGCACTGAGCCCCTGCAGATGCCCTTCCTGTGCTCAGAGGAGCCCACATGTAACCCTAGGCAGGATCCTTCCCCCAtttggcagatgaggaaactgaggcccagagaagaggaggaagctgCTCAGGGTCACCCAGTGAGCCGGTGGCTGGGATTCAACACTAGGCAAGtccccagatccacccccacc-cctccccacactcccTGCCACAGAACCTTTTAAGCTCTCACTGCTGGGGCAGGACTGGCCCTTTGCCCTGGAG--CTCTGGTCACTCAG-GTGGGCTCCGTAGCCACAGCCACGCAGGGAAGGGAG--TGACAGGGTGCAG------CTGGC---------------AGGATTCTGTGTCACCCCTCCGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGCCC-------AGCTGCCAGCCTGTTCCTCCACCTGGGGACTCAAA---GCCCCTCACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCCGGCT-----GGAGAAGCAACAGAACACAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGGCTAATCCCTATTCAGCTCCATCCTCAGAGAAATATGAAAGGACCCAGAAGGTGAAGGCTGGTCCT-AGCCTTG-GGGGTCATGGGCCTGGCCGTGGGACTGGTGCGGGTTGATAAACCTAATTCCTTGGAGGCGATGGTGACAT-------------GGCTCAGCATGAAAG-ATGGTGTccaggtgtg----------tgcatgtgcatgtgagGTCAGCAAAGCCCTCTCTGCTCCCACAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGGAAGGGGAGGCCTCCCTTGATAATG---AGCATCACCTTACGAACTCCCCTGGGCTGCCACCTctcagactttattttttctgactcAGTCTCAACTCGAAACAAGgagagaggagctgag-------agagagaaa-----------a------gctccAAGCTGTCACCTTTGGTAGATGCTCAAGA---AAA-GGAGCAT--------CTtgttacaggtggggaaactgaggctctaagAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28115856 1925 - 130588469 GAGAAGAATTCTTGAGGCTCTTGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCCAGAGCTGGTTAGAGAGCAGAGCACTTAGAGG-CCAGGTTGGGg--ctggtgactttgggccactctcttaacctctctgTTTGCCGAATTCCTACAGGGTGGGGGCTGGACGG--------------GCTCCATCCCTC-----------------CAGGTAAAGCCTGGTGGTCTTCTCCAAGAGGGGTGGCGTGTCCTCAATCCCCCCAGGTCCCTGCACCGAAGCCTGTTCCCTGCTCAGACCACACGTGACCTGGTGGGGAGGCCACCTGTAGGG-CAGA-GGGAAGCAGCTGACCTGGATGAGCTGGCAGAGGTG-GGGAGCCCCTGGtatcgagcgtctctgggtgcccggcactgtgctggggctccacacatacaaaatgcctgtgccagcctcacaaccaccctgtggggaaggggtggtgttcctcccgcttcatagctgacagcatggaggctccgagT-GCAGGGGGA---GTccaggtcgaacccagatctgtctgattccaaacccaaactctttcccatcagccactgGCAGAGAGCACAAGCAAGGGCGTGGCCTCATCTTGGCCCCTCTCC-Tc-------------tttgcacagg-ctgtctcccctcctcgcctg-ttttcgccttctctattcaactcctgcccagcccaaggtaagactcctccaggaagtcctccttgaTGTCTGACAGTCAAACCCCAAGGGTGCTACCCAGCGAGGCTGCTTGTTGTTCAATTTGCCAACACAGCTTTAGATTTTGCCGCAGTGAGTGCAGATGCAAACATGAGCTAATTTTATTCTCTCACCAGGCTCACCAGTATTTGCTGGGCACTGACTTGGAGCCAAGGGCTGC-AGGGTTGCAGAGCGCACAGGAACAAACATGTACTGAGCCCCTGCAGATGCCCTTCCTGTGCTCAGGGGAGCCCGCATGTaaccctaggcaagatccttcccccatttggcaaatgaggaaactgaggcccagagaagaggaggaagctgctcagggtcactcagtgagctggtggctgggattcaacactaggcaagtccccagatccacaCCCACC-CCTCCCCACACTCCCTGCCCCAGAACCTTTTAAGCTCTCACTGCTGGGGCAATACTGGCCCTTTGCCCTGGAG--CTCTGGTCACTCAG-GTGGGCCCCGTAGCCACAGCCACACAGGGAGGGGAG--TGACAGGGTGCAG------CTGGC---------------AGGATTCTATGTCACCCCTTGGT-------------------------------------GA---CATGCCCACC-----------TG--------------------------------------CTCAGGCC-------AGCCTCCAGCCTGTTCCTCCACCTGGGGACTCAAA---GCCCCTGACCAG-----CCCCCTGACCACT-CAC------TTCCCCAAACTGTCC---AGCTCTGGCT-----AGAGAAGCAACAGAACACAAATTAATGCATCTTCAG--CTCTGGCTCCAAATGATTTTTCTCTCACCTTCCTGGGCTAATCCCTCATCAGCTCCATCTTCAGAGAAATATGAAAGGACCCAGAGGGTGAAGGCTGGTCCT-AGCCTTG-GGGGACATGGGCCTGGCCGTGGGACTGGTGTGGGTTGATAAACCTAATTCCTTGGAGGTGATGGTGACAT-------------GGCTCAGCATGAAAG-ATGGTGTCCAGGTGTC----------TGCATGTGCATGTGAGGTCAGCAAAGCACTCTCTGCTCCCCCAGGCCCTGGACCCAGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTCCCCAGTTTGCTAATGG-AGGGGAGGCCTGCCTTGACAATG---AGCATCACCTTGGGAACTCCCCTGGGCCGCCACCTCTCAGACGTTATTTTTTCTGACTCAATCTCAGCTCGAAACAAGGAGAGAGGGGCTGAG-------AGAGAGAAA-----------A------GCTCCAAGCTGTCACCTTTGGTAGATGCTCAAGA---AAA-GGAGCGt--------cttgttacaggtggggaaactgaggctctaagagg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64568426 1893 + 155834243 GAGATGAGTCCTTGAGGCTCTCGGTCCAGGTGTTTGGAGGTGCCCCC--ACCACCTACCCCAGAGCTGGTTAGAAAGCAGAGCACTTGGAGGCCCAGGTTGGTG--CTGG-GACTTTGGGCCACTCTCTCAACCTCTCTATTTTCTGGATTCCTACAGAGTGGGAGCTGGATGG--------------ACTCCATTCCTC-----------------CAGGTAGAGGCTAGTGGTCTTCTCCAAGAGGTGTGGCATGTCCTCAA-CCCCCCAGTTCTCTGCACCAAAGCCTGGTCCCAGCTCAGAGCACACGTGATCAGGTGAGGAGGCCACCTGTGGGG-CAGA-AGGGACCAGGTGACCTGGATGA-CTGGCAGGGGGGCAGGAGCCCCTGGTACCCAGCATCCCTGGGTGCCCAGCATTGTGTTGGGGCTCCACACACAAAAAATGCCTGTGCCAGCCTCATGACCACAGTGTAGGGAAAGGAGGATGTTCCCTCAACTTCCTAGCTGACAGCACGGAGGCTCCGAGCAGCAGACGGACCTGAccaggttgaacccagatctgccccattccaaacctaaactc-ttcccaTCAGCCATTGGCAGAGAGCACAAGAGAGGGGGTGGCCTCACCTTGGCCCCTCTCCTTT-------------TTTGCACAGGTCTGTCTTCCCTCCTCACCTGTTTTTCCCCTCCTCTTTTCAATTCCTGCCCAACCCAAGGCAAGCCTCCTCCAGGAAGTCCTCCCTGAGGTCTGACAGCCAAACCCCAAGGGTGCTACCGAGTGAGGCCTCTAGTTGCTCAATTTGCCAACACAGTTTTAGACTTTGCTGCCATGAGTGCAGATGCAAACATGTGTTCATTTCATTCTCTCACCAGGCTCATCAGTATTTGCTAGTCACTGATTTGAAGCCAGGTGCTGT-AGGGCTGCAGAAGGCACAGGAATAAACATGCACGGAGCCCCTGCAGATGCCTTTCCTGTGCCCAGGGGAACCCACATGTCATCCCAGGCAGGCTCCTCGccccatttggcagatgagaaaactgaggcccagggaaggggaggaagctgctcagggtcactcggtgagccaggggctgggattcaacactaggccagtccccaaatccacacctacc-cctccccacattccctGCCCCACAACCTTTTAAGCTCTCACTGCTGGGGCAGGACTGGCCCGTTGCCCTGGCAC-CTCTGGTCATGAAG-GTGGGCGCTGCAGTCACAGCCTCACAGGGAGGGGAG--GGACAGAATGCAG------CTAGC---------------GGGGTCCTATGTCACCCTTCAGT-------------------------------------GA---CCTGCCCATCACCTCTGTTCATG--------------------------------------CTCAGCCC-------AGCCTCCAGGCTGTGCCTCCACCTGGGGGCTCAAA---A---------------------------------------------------------AG-------------GGGAAAGCAACAGAACATAAATTAATGCATCTTCAA--CTCTGGCTCCAGATGATTTTTCTCTTGCCTTCCTGGGCTGATCCCTCATCAGCTCCATCCTCAGAGAAATATGAAAGGACCCAGAGGGTGGAGGTTGGTCCT-AGCCTTG-GGGGATGTGGCCCTGGCCCCGGGACTAGTGCAGTTTGATAAACCCCATTCCTTGGAGCTGGTGGTGACAC-------------GGCTCAGCCTGAAAG-GTGGTGTCCgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgAGGTCAGCAAAGCCCTCTCTGCTCCCCCAGGACCTGGACCTGGGCCCTGGGGCTAAGCTGGGGCTGCTGCA-TGAGTTCCCAGTTTGCTAATGG-AGGGGAGGCCTCACTTGATAATG---AGCAT-------------CCCCTGGGCCGCCACCTCCCAGACTTTATTTTTTCTGACTCAGTCTCAATTTGAAATAAGGAGAGAGAGGCTGAG-------AGAGAGAAA-----------A------ATTCCAAGCTGTCACCTTTGGTAAATTCTC-------AAA-GAaatctaagtctcacttgttacagataggaaaactgaggctgtaaaagg i calJac3.chr7 C 0 C 0 s canFam3.chr2 14965781 1769 - 85426708 AAGAGGATTCCTTGAGCCTCTCCACTCCGGTGTTTGTATTTATAGACGGAGGACCCGCCCCCAGGCTGGCCAGAGAGCAGAGCACTGGGGGACCCACACTGGGGACTGGGTGACTGTGGGCCACTCCCTTAACCTCTCTG--TGCTGGGTTCCTACGGGGGGCGGGGCGGGGGGCTGTGGGCCTCCCAGCTCGGCGCTTCTAGGGTCTGTTTCACGGCAAGTAGAGCCTGGTGGTCTTCTCCAAGAGGACTGACGTGTCCGTG--TCCCCCGGGTCCCTGCACTGAAGCCCGCCCCCCACT-GGGGCACATGTGA-CAGGTGGGGAGGCCAGCCCTGGGGACAGA-GGAGAGCAGGTGACCTGGGTGGGCTGACAGAGGGG-AGGAGCTCCCGTTGCCCAGCACCCCTGGGAGCCCAGCACTGTGCTGAGACTCC--------------CCCGCACca----cacgac-------------------------------------------------------------ac-acaca-------------------------------------cacacacacacacacTCCCCAGGGCCA--GGCTCACAACACAAGACAGACA--GGTCTCACCTTGACCCCTCACC-TCCCACCTCCCTGCTTTTGCACCAG-CAGTCTCCCCTCCTCGCATG-CCTTCCCCTCCTCTATCCAAATCCCCCACAGCCCAAGGCCTGCCTCCTCCAGGAAGTCTTC------------CAGCCAAACCCTCCTGGCTCCACCCAGCTGGCCCTCTGGTTGTTTCACTGCCCAACACAGTTTTAGATTTTGC-GCTGTGAGGCCAGACCCACGCATGAGCTCATCTCATTCTCTCTCCGGGTTAATTGATATTTATGGGGTGCTGGCTCGGAGCCAGGCACTGTGGGGGCCCCAGAGGGGATGAGAATAAACACCCACCGAGCACCTGCAGATGCC---CCTGGGCCC-GGTcagcccacgtggggtcc-gggcaggctcctcgccctgttggaaggatgagg-atctggggcccagagacagg--agaggtggctcagg-tcccacagtgagtcagtggctgggactc---------caagtc-------ccacccccgcc-cgtTACCCACCCCTCCCCCCCAGAACTCCCTAA-CCCCCTGGGCTCGGGCAGGACTGCTCCTTTAGCCTGGGGCTGTCTGGTCACACGA-GGGGGCTCAGTGGCCACAGCTCCACAGAGCAGGGGGCAGGACAGGG-GCAGCAAGGCCTGGCCCTTGGTGACACGTGGGGCCCTTAGGTGACCCCTCAGG-------------------------------------GATGCCAGGCCACCC-----------TC--------------------------------------AGTGGCCC-------ACTCACCACCTCTTTCCTCCCCGCCTGGCCCCGGCTGTGCTCCCACCCGG-----ACTCCCACCCCCTCCACCCCGCGCTCCCCAGACCGTCCCCAGGGCCCGGCTCTCCCTGAGGAGCCCCAGGGTGTGAGTTAGTCCACGTCC----CTCTGGTTGCAGCCGCT-----------CTTCTCCGGCTG--CCCCTGCCCGCCCGACCCTCAGAGGCTGCTCGGGGAA--CAGAGGGTG-CTGCTGGTGCG-GGCCATG-GG-----CGGGCGAGGCC--------------GGGTGACAAGTCCCACCCCTTGGAGCTAGGAGCCACGT-------------GTCCCCAGTGAGACG-AGGCTGTGC-GGTGGC--------CGCGCAGGGGGACACGAGG----------CCCTCCTGCCTCC----------GACCCTGGCCGTGCGGCGCTCCCGGGGC----------------------GCTGACGG-AGG-----CCTCACCTGACACGG---GGTGA---CCTGTGGACGCTGCCG----GCTACCCCCCAAACCTCA------CGGTCACAG--TCGGCCTGGAGGGGAGCAGGAGAGGCTGAG-------ACAGACAGG-----------AAAGCGCACCCCGAGCTTCGACAGCCCGGGGAGCCCCCAGATCCACC-AGAGCTC-----TC-CCTGCTGGGGGCGGGAAA----CGGCCCGGGGAGG i canFam3.chr2 C 0 C 0 e mm10.chr4 25387677 1002 - 156508116 I a score=805414.000000 s hg38.chr1_KI270760v1_alt 8631 359 + 109528 gagctcagtgtttgtacaaccagttggtggcagagctgggacaggcatcgggactcagcagagctcctgactgtcagtgcatgcATGTGAAATGGTGTGTGTGACAGT-TAAGGACACAAATGCAGAGTGCGTGAGAACATGTGCCTTAGTCTCAGAGTGTGAGTGTGAGAAACACTTGAGGGCCGTGGCGGTGGCTCTCCCCTCGGGCAACGCCCAGATCCTGTGGGTGACTCCTAGCAGATCTTCTGTGTCCCCAGCCTGTCCTTGCTGGACTCTGAGCTGATGTCCCATTCTAGAAAATTTTCAGCTGCTGGCCAGGAACAGTAGGGAAC---------------------CCAATTGTTTCTATTTGGTCTTTATTG----- s panTro4.chr1 30439507 359 + 228333871 gagttcagtgtttgtacaaccagttggtggcagagctgggacaggcatcgggactcagcagagctcctgactgtcagtgcatgcATGTGAAATGGTGTGTGTGACAGT-TAAGGACACAAATGCGGAGTGCGTGAGAACATGTGCCTTAGTCTCAGAGTGTGAGTGTGAGAAACACTTGAGGGCGGTGGCGGTGGCTCTCCCCTCGGGCAACGCCCAGATCCTGTGGGTGACTCCTAGCAGATCTTCTGTGTCCCCAGCCTGTCCTTGCTGGACTCTGAGCTGATGTCCCATTCTAGAAAATTTTCAGCTGCTGGCCAGGAACAGTAGGGAAC---------------------CCAATTGTTTCTATTTGGTCTTTATTG----- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30028289 359 - 229942017 gagctcagtgtttgtacaaccagttggtggcagagctgggacaggcatcgggcctcagcagggctcctgactgtcagtgcatgcACGTGAAATGGTGCGTGTGACAGT-TAAGGACACAAATGCGAAGTGCGTGAGAACATGTGCCTTAGTCTCAGAATGTGAGTGTGAGAAACACTTGAGGGCAGTGGCGGTGGCTCTCCCCTCGGGCAACCCCCAGATTCTGTGGGTGACTCCTAGCAGATCTTCTGTGCCCCCAGCTTGTCCTTGGTGGACTCTGAGCTGATGTCCCATTCCAGAAAATTTTCAGCTGCTGGCCAGGAACCGTAGGGAAC---------------------CCAATTGTTCCTATTTGGTCTTTATTG----- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33325456 359 + 229590362 aagctcagtgtttatacaagcagttggtggcagagctgggacaggcatcgggactcagcagggctccggactgtcagtgcatgcATGTGTAATGGTGTGTATGACAGT-TAAGGACACAAATGCGAAGTGTGTGAGAGCATGTGCCTTAGTCTCAGAGTGTGAGTGTGAGAAACACTTGAGGGTGGTGGCCGTGGCTCTTCCCTTCAGCAACCCCCAGATCCTGTGGGTGACTCCTAGCAGATCTTCTGTGGCCCCAGCCTGTCCTTGCCGGACTCTGAGCTGACGTTCCATTCCAGAAAATTCTCAGCTGCTGGCCAGGAGCAGGAGGGAAC---------------------CCAGTTGTTTCTATTTGGTCTTTATTG----- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29836549 359 - 227556264 aagctcagtgtttatacaagcagttggtggcagagctgggacaggcatcgggactcagcagggctcctgactgtcagtgcatgcATGTGTAATGGTGTGTATGACAGT-TAAGGACACAAATGCGAAGTGTGTGAGACCATGTGCCTTAGTCTCAGAGTGTGAGTGTGAGAAACGCTTGAGGGTGGTGGCCGTGGCTCTTCCCTTCAGCAACCCCCAGATCCTGTGGGTGACTCCTAGCAGATCTTCTGTGGCCCCAGCCTGTCCTTGCCGGACTCTGAGCTGACGTTCCATTCCAGAAAATTCTCAGCTGCTGGCCAGGAGCAGGAGGGAAC---------------------CCAGTTGTTTCTATTTGGTCTTTATTG----- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32602541 359 + 220367699 AAGCTCAGTGTTTATACAAGCAgttggtggcagagctgggacaggCATCAGGACTCAGCAGGGCTCCTGACTGTCAGTGCATGCATGTGAAATGGTGCGTGTGACAGT-TAAGGACACAAATGCGAAGTGCGTGAGAACATGTGCCTTAGTCTcagagtgtgagtgtgagaaACACTTGAGGGTGGTGGCCGTGGCTCTTCCCTTCAGCAACCCCCAGATCCTGTGGGTGACTCCTAGCAGATCTTCTGTGTCCCCAGCCTGTCCTTGCCGGACTCTGAGCTGACGTTCCATTCCAGAAAATTCTCAGCTGCTGGCCAGGAGCAGGAGGGAAC---------------------CCAGTTGTTTCTATGTGGtctttattg----- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28117781 359 - 130588469 gagctcagtgtttatacaagcagttggtggcagagctgggacaggcatcgggactcagcagggctcctgactgtcagtgcatgcACATGAAATGGTGTGTGTGACAGT-TAAGGACACAAATGCGAAGTGCGTGAGAACATGTGCCTTAGTCTCAGAGTGTGAGTGTGAGAAACACTTGAGGGCGGTGGCCGTGGCTCTTCACTCTGGCAACCCCCAGATCCTGTGGGTGATTCCTAGCAGATCTTCTGTGGCCCCAGCCTGTCCTTGCCGGACTCTGAGCTGACGTTCCATTCCAGAAAATTCTCAGCTGCTGGCCAGGAGCAGTAGGGAAC---------------------CCAGTTGTTTCTATTTATTCTTTATTG----- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64570319 357 + 155834243 gagctcaatgtttatgcaaccaattggtggcagagctgggagcagcatcgggactcagcagggctcctgactggcagtgcatCCAGGTGAAATGGAGTGTGCGACAGTCTAAGGACACAAATGCAAAGGGCATGAGAA---ATGCCGTAGTCTCAGAGTGTAAGCATGAGAAACACTTGAAGGCAGTAGCGGTGGCTCTCCCCTGTGATCACCCCGGGATCCTGTGTGTGACTCCTAGCAGATCCTCTCTGTCCCCAGCCTTTCCTTGCTGGACTCTGAGCTGATGTTCCCCTCCAGGAAATTCTCAGCTACTGGCTGGGAGCAGTAGGGATC---------------------CCAGTTGTTTCTATTTGGTCTTTATTG----- i calJac3.chr7 C 0 C 0 s canFam3.chr2 14967550 253 - 85426708 GCGC-CAGGGGTCACAC-GCCAGTTGGCGCC-----------------CAGGACTCCGCGCGGGCTCCGAGGGTCGCGGCGTCCCCGTGCCACGGTGTCAGGGCGAGT------------------------------------CCCCGGCTGCCGAGC---------------------------TGTCGGTGACCGTCGCCACAGGT-GCGCCCCGACCCT-------------------------------CCA-----------------TCCGAGCTGGCGCCCC--TCCCGGGGACGCTCGGGTCCTCAGCGGGCGCCGGCGGGGACACGGGGGAGAGGGCGGGAAGGCCACTCTTCTTGATTTGGTTTTCAGATCAGGG i canFam3.chr2 C 0 C 0 e mm10.chr4 25387677 1002 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I a score=1035012.000000 s hg38.chr1_KI270760v1_alt 8990 469 + 109528 AATAAAAATGAAATTTAAATTCTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACGGATTCCCCACAACTTGATTATGTCTAACTAGATTAATTGTATGGAGAGTGATTTCTTTTCTCTGAGAAAATTAACCACAGAGCAGGGGGGTCATCTGAGCCCCAATGACTCCCTA-CCCCCAAGAAAGTCCCCAGGGCCCAGGTTCTGGGTGGGGGGGGCTGCCTTGTCCCAAGGCCTCC----------------CTCTGCCTCTCT-------CCCATCACTGGCTCCTTCTGTCACCAAGTCCCTGTCACCATCTGTCTCTGTCTCCCACTGTCCCTGACCCTCTCCTGGTTTGGGCTTCTGCG---GTCCTGAC--TGCG--------------GGGGAGGCCACCGCCCTGCG--------------------CCCCTGCATTAAAGAGGCTG----------ATGTTCTCCATG-----AGGGGAGGGGAAAGGCACAGTGTGAAGTGCTCAAGTTCACCTTCTGAAGCAGCTTG s panTro4.chr1 30439866 468 + 228333871 AATAAAAATGAAATTTAAACTCTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACAGATTCCCCACAACTTGATTATGTCTAACTAGATTAATTGGATGGAGAGTGATTTCTTTTCTCTGAGAAAATTAACCACAGAGCAGGGGGGTCATCTGAGCCCCAATGACTCCCTA-CCCCCAAGAAAGTCCCCAGGGCCCAGGTTCTGGGT-TGGGGGGCTACCTTGTCCCAAGGCCTCC----------------CTCTGCCTCTCT-------CCCATCACTGGCTCCTTCTGTAACCAAGTCCCTGTCACCATCTGTCTCTGCCTCCCACTGTCCCTGACCCTCTCCTGGTTTGGGCTTCTGTG---GTCCTGAC--TGCG--------------GGGGAGGCCACCGCCCTGCA--------------------CCCCTGCATTAAAGAGGCTG----------ATGTTCTCCATG-----AGGGGAGGGGAAAAGCACAGTGAGAAGTGCTCAAGTTCACCTTCTGAAGCAGCTTG i panTro4.chr1 C 0 M 1012 s ponAbe2.chr1 30028648 468 - 229942017 AATAAAAATGAAATTTAAACTCTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACGGATTCCCCACAACTTGATTATGTCTAACTAGATTCATTGAATGGAGAGTGATTTCTTTTCTCTGAGAAAATTAACCACAGAGCAGGGGGGTCATGTGAGCCCCAATGACTCCCTA-CCCCCAAGCAAGTCCCCAGGGCCCAGGTTTTGGGT-TGGGAGGCTGCCTTGTCCCAAGGCCTCC----------------CTCTGCCTCTCT-------CCCATCTCTGGCTCCTTCTGTCACTGAGTTCCTGTCACCATCTGTCTCTGTCTCCCACTGTCCCTGACCCTCTCCTGGTTTGGGCTTCTATC---GTCCTGAC--TGCG--------------GGGGAGGGCACCGCCCTGCA--------------------CCCCTGCATTAAAGAGGCCG----------ATGTTCTCCATG-----AGGGGAGGGGAAAGGCACAGGGTGAAGTGCTCAAGTTCACCTTCTGAAGCAGCTGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33325815 393 + 229590362 AATAAAAATGAAATTTAAACTCTTTGCAGGGAGGTAATTTTT-CCTAATCATTCACCCTGCTGCACGGA-TCCCCACAACTTGATTCTGTGTAACTGGATTAATTGGATGGAGAGTGATTTCTTTTCTGTGAGAAAATTAACCACAGAGAAGGGGGGTCATTTCAGGCACAATGACTCCCTA-CCCCCAAGCAAGTTCCTGGGACCCAGGTTTTGGGT--GGGGGGCTGCCTTGTTCCAAGGCCTCCCTCTGGCCTCTCCTCTCTCTGCCTCTCT-------CCCATCACTGGCTCCTTCTGTCACCGAGTCCCTATCACCATCTGTCTCTGTCTCCCA-TGTCCCTGACCCTCTCCTTTTCTGGGCTTC----------------------------------------------------------------------------------------------------------------------------------------------TGTGAAGTGCTCAATTTCATCTTCTGAAGCAGCTGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29836908 481 - 227556264 AATAAAAATGAAATTTAAACTCTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACGGA-TCCCCACAACTTGATTCTGTGTAACTGGATTAATTGGATGGAGAGTGATTTCTTTTCTGTGAGAAAATTAACCACAGAGAAGGGGGGTCATTTCAGGCACAATGACTCCCTA-CCCCCAAGCAAGTTCCTGGGACCCAGGTTTTGGGT--GGGGGGCTGCCTTGTTCCAAGGCCTCCCTCTGGCCTCTCCTCTCTCTGCCTCTCT-------CCCATCACTGGCTCCTTCTGTCACCGAGTCCCTATCACCATCTGTCTCTGTCTCCCA-TGTCCCTGACCCTCTCCTTTTCTGGGCTTCTGTG---ATCCTGAC--TGCG--------------GGCGAGGCCACCGCCCTGCG--------------------CCCCTGCATTAAAGAGTCTG----------ATGTTCTCCATG-----AGGGGAGGGGAAAGGCACAGTGTGAAGTGCTCAAGTTCACCTTCTGAAGCAGCTGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32602900 477 + 220367699 aat-aaaatgaaatttaaactcTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACGGA-TCCCCACAACTTGATTCTGTCTAACTGGATTAATTGGATGGAGAGTGATTTCTTTTCTGTGAGAAAATTAACCACAGAGAAGGGGGGTCATTTCAGGCACAATGACTCCCTA-CCCCCAAGCAAGTTCCTGGGGCCCAGGCTTTGGGT--GGGGGGCTGCCTTTTTCCAAGGCCTCCTTCTGgcctctc--ctctctgcctctct-------cccatcACTGGCTCCTTCTGTCACCGAGT-CCTATCAccatctgtctctgtctccca-tgTCCCTGACCCTCTCCTTGTCTGGGCTTCTGTG---GTCCTGAC--TGCG--------------GGGGAGGCCACCGCCCTGCG--------------------CCCCTGGATTAAAGAGTCTG----------ATGTTCTCcatg-----aggggaggggaaaggcacAGCGTGAAGCGCTCAAGTTCACCTTCTGAAGCAGCTGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28118140 481 - 130588469 AATAAAAATGAAATTTAAACTCTTTGCAGGGAGGTAATTTTT-CCTAATCACTCACCCTGCTGCACAGA-TGCCCACAACTTGATTCTGTCTAACTGGATTAATTGGATGGAGAGTGATTTCTTTTCTGTGAGAAAATTAACCACAGAGAAGGGGGGTCATTTCAGGCACAATGACTCCCTA-CCCCCAAGCAAGTTCCTGGGGCCCAGGTTTTGGGT--GGGGGGCTGCCTTGTTCCAAGGCCTCCCTCTGGCCTCTCCTCTCTCTGCCTCTCT-------CCCATCACTGGCTCCTTCTGTCACCGAGTCCCTATCACCATCTGTCTCTGTCTCCCA-TGTCCCTGACCCTCTCCTTGTCTGGGCTTCTGTG---GTCCTGGC--TGCG--------------GGGGAGGCCACCGCCCTGCA--------------------CTCCTGGATTAAAGAGTCTG----------ATGTTCTCCCTG-----AGGGGAGGGGAAAGGCACAGAGTGAAGCGCTCAAGTTCACCTTCTGAAGCAGCTGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64570676 478 + 155834243 AATAAAAATGAAATGTCAACTCTTTGCAGGGAGGTAATATTT-CCTAATCACTCACCCTGCTGCATGGA-TCCCCGCAACTTGATTATGTCTAACTAGATTAATTGGATGGAGAGTGA-----TTTCTCTGAGAAAATGAACCACAGAGAAGAGGGGTCATTTGAGGCACAGTGACTCCCTACCCCCCAAGCAAGTCCCTGGGGCCCAGGTTTGGGGT--GGGGGGCTGCCTTGTCCCAGGGCTTCCCTCCAGCTTCCCCTCTCTCTGC--CACT-------CCCATCACTGGCTCCTTCTGTCACCGAGTCCCTGTCACCATCTGTCTCTGTCTCCCACTGTCCCTGACCCTCTCCTGCTTTGGACTTCTGTG---ATCCCGAC--TGTG------------CTGGGGAGGCTGCCACCATGTG--------------------CCCCTGCATTAAGGAGGCTG----------ATGTTCTCCATG-----AGGGGAGGGGAAAGCCACAGGGTGAAGTGCTCAAGTTCACTTTCTGAAGCAGCTGG i calJac3.chr7 C 0 C 0 s mm10.chr4 25388679 453 - 156508116 AATTTAAACCAAATTCTGGCTGTTTGCAGAGAGATGACCTTTGCCT--CCATCCAGTCTCCTG---AGA-CTCCTCCGGCTTTCTTGTTCCCAATCACATTCATTGGGT--AAAGTGATTTCTTTTATCTGGGGAGAGCAGGCACTGAGAAGGTGGGGTGTCAGAGACCTGGTGACT------------------------------GGGTCAGTAGA--AGGGGCCATTGATGCCCCAGGCCTTCTCTGCTGCCACCTCTACTTCTTGCTCCCTTACTAAGTCAATGTCTGTCTGCCTGTCTCAAC-AGTACC--TCAGAATCTGTCTTTTTTATCC--TGTCCC---CACTTTCTTGTTTTGGACTCCTGTG---GTTCTAACCATACA--------------GGGGGGCTAGCTATACCCTC--------------------TCTCTGCA--AGGGGAGCTACCCAGAGAGCATGCATTAACTA-----ACTACATGGAAAGATCA---TGTGACACACACCAAGCCACCTTCCAGGGCTGCTGG i mm10.chr4 I 1002 C 0 s canFam3.chr2 14967803 447 - 85426708 AACAAAAATTGTATTTATGCTCCTGGAGAGGAGCTGATTTT--CCTGATCGCCCACCCGGCTGCACACG-GCTCCACAGC----------------------GTCGGGTGGGGAGCGACTCCTTGTCCCTGAGACTGTGAACCGCAGAGA---GAGGCCGTCTGGGGC-CGGGAACCCCCTG-CCCCCCA-CAAGCCC-------------------T-------------------CCTGGCCTCCCTCCGGCCTCCTGT--CCCTGCTTCTCT-------CCCGTCACTTGCTCTTCCCGGCACCGGGTCTCCGG-------TGTCTCTGCCTGCCC-TGTCCCC-ACCGACTCCTGGCGTGCCCCCCGGGGTGAGTCCTGCC--TGTGCCCAGGGCCCCTCCCGGCGCGCCTTCTCTCTGCAGGAGCCGAGCTGGGGCCTTCCCCCCACATTCCCGAGGACG----------ATGCTCACTGTGCTTGAAGAGGAGGGAGGAGACA-GGCGGGACTCGCTCAGG-TCACCTGCCCTGGCCGCTGG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 443241 3963 - 28733288 I a score=238570.000000 s hg38.chr1_KI270760v1_alt 9459 161 + 109528 -GGCTGAGGTGAGGGGGTCACATGGACAGCCCCCCAGAGCCCCAGCCAGTGTACCACCAATATCCTGGTTTCCAAAGCCTTTAAACTACATAGAGTTTTACAGTTTGCGTGGGCTGGATGCAGCCTGAGTGCCCACAGAGG--GGGCTGCAGGGCCAGGCTGGG s ponAbe2.chr1 30029116 161 - 229942017 -GGCTGAGGTGAGGGGGTCACATGGGCAGCCCCCCATAGCCCCATCCCGTGTGCCACCAATATCCTGGTTTCCAAAGCTTTTAAACTACATAGAGTTTTACAGTTTGCATGGGCTGGATGCAGCCTGAGTGCCCACAGAGG--GGGCTGCAGGGCCAGGCTGGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33326208 161 + 229590362 -GGCTGAGGCGAGGGAGTCACGTGGGCAGCCCCCCATAGCCCCACCCCGTGTGCCACCAATATCCTGGTTTCCAAAGCCTTAAAACTACATAGAGTTTTACAGTTTGCATGGGCTGGATGCAGCCTGAGTGTCCACAGAGG--GGGCTGCAGGGCCAGGCTGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29837389 161 - 227556264 -GGCTGAGGCGAGGGAGTCACGTGGGCAGCCCCCCATAGCCCCACTCCGTGTGCCACCAATATCCTGGTTTCCAAAGCCTTAAAACTACATAGAGTTTTACAGTTTGCATGGGCTGGATGCAGCCTGAGTGTCCACAGAGG--GGGCTGCAGGGCCAGGCTGGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32603377 161 + 220367699 -GGCTGAGGCAAGGGGGTCACGTGGGCAGCCCCCCATAGCCCCACCCCGTGTGCCACCAATATCCTGGTTTCCAAAGCCTTTAAACTACATAGAGTTTTACAGTTTGCATGGGCTGGATGCAGCCTGAGTGCCCACAGAGG--GGGCTgcagggccaggctggg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28118621 161 - 130588469 -GGCTGAGGCGAGGGGGTCACGTGGGCAGCCCCCCATAGCCCCACCCCATGTGCCACCAATATGCTGGTTTCCAAAGCCTTAAAACTACATAGAGTTTTACAGTGTGCATGGGCTGGATGCAGCCTGAGTGCCCACAGAGG--GGGCTGCAGGGCCAGGCTGGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64571154 131 + 155834243 -GGCTAAGGTGAGGGG---ATATTGGAA---------------------------ACCAATATCCTGGTTTCCAAAGCCTTTAAACTATATAGAGTTTTACAGTTTGTGTGGGCTGGATGCAGCCTGAGTGCCCACAGACA--GGGCTGCAGTCCCAGCCTGAG i calJac3.chr7 C 0 I 4172 s mm10.chr4 25389132 53 - 156508116 -------GACGGAGAGA--------------------------------------------------------AAAGCCTTACAACT--------------------------CTGTATGC--CCTAAGTTT--------------------GGTCAGGCTGAA i mm10.chr4 C 0 C 0 s canFam3.chr2 14968250 70 - 85426708 GGGCTGGCGGGCAGGGGACCC------------------------------------------------------------------------------ACAGT----------------CGGCCTGGGCGCCCACAGAGGGCGGCCTGCGGGGTCAGGTGGGG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 443241 3963 - 28733288 I e panTro4.chr1 30440334 1012 + 228333871 M a score=165139.000000 s hg38.chr1_KI270760v1_alt 9620 116 + 109528 CCAGACCAGCTGTGGGGCTCAGGGAGGGCCTGGCTGGAAGAAGGGGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTG--------------------AAGGGTCTG--CAGTCCCAGTCGCTCC-----CCCATGGCC- s ponAbe2.chr1 30029277 116 - 229942017 CCAGACCAGCTGTGGGGCTCAGGGAGGGCCTGGCTGGAAGAAGGGGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTG--------------------AAGGGTCTG--CAGTCCCAGTCTCTCC-----CCCATGGCC- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33326369 116 + 229590362 CCAGACCAGCTGTGGGGCTCAGGGAGGGCCTGGCTGGAAGAAGGAGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTG--------------------AAGGGTCTG--CAGTCCCAGTCGCTCC-----CCCATGGCC- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29837550 116 - 227556264 CCAGACCAGCTGTGGGGCTCAGGGAGGGCCTGGCTGGAAGAAGGAGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTA--------------------AAGGGTCTG--CAGTCCCAGTCACTCC-----CCCATGGCC- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32603538 116 + 220367699 ccaGACCAGCTGTGGGGCTCAGGGAAGGCCTGGCTGGAAGAAGGGGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTG--------------------AAGGGTCTG--CAGTCCCAGTCACTCC-----CCCATGGCC- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28118782 116 - 130588469 CCAGACCAGCTGTGGGGCTCAGGGAGGGCCTGGCTGGAAGAAGGGGGTCTGGGCAGCCCCTCTCTCAGCCTGAGGGAGGCTG--------------------AAGGGTCTG--CAGTCCCAGTCGCTCC-----CCCATGGCC- i chlSab2.chr20 C 0 C 0 s mm10.chr4 25389185 77 - 156508116 ----------------------------CCTGG------------AGTCTGAGCAGCAACTCCCTCAAATGGAGAGCAGCTG--------------------GAAGGCCTAATCATTCTTGGCCCTCTC-----CACAATCC-- i mm10.chr4 C 0 C 0 s canFam3.chr2 14968320 105 - 85426708 --------GCTG-----------------CTGGCGGGGAGAACGGGGTGAGGGCAGTTC------------GAGGGCGGCCGGGCCCTCGGTGCTGGGGTGCAGGGGGCTG--AAGGCCCAGCCTCCCCATCCTCCTGGGGCCC i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 443241 3963 - 28733288 I e calJac3.chr7 64571285 4172 + 155834243 I e panTro4.chr1 30440334 1012 + 228333871 M a score=1405087.000000 s hg38.chr1_KI270760v1_alt 9736 747 + 109528 AAGCTGGCACT----TCCC-TCCAACA---------GG--------CACAGAATCCCCAGCCCCAGACACCTGCTCCTTCCTGG-----------AGCTCAGCACCACCTTCCTTTCGGAACGCTGGGCCTGGGCCTGTCCTCAGCTGCTGCTGCCCTGCCGC----CCCTGCTGGGGGTCTCCTAGCCCTGCCCCCTTGGGGTCTCCCTCCATA-CCCCTGTctacactgttctcacccagtccagggcaccatcttctctccccagacactgcacagctgctccagtctcctggacccagaccctccccctgcagttcacaggctgcagccaacatgaacaggccatgccccctctcaaagcccttcca----tggctccgctgctctgaggactaaaatccc--------aacaa--cagtgtggactgcagggcccttgtgaaacagccacatggacctctgcagccccatctttccc-actctcgtct-taca-------------------------------------------ctcgcCACACAGAGTCAGCTGTGTGCAGGCCTCTGTGTGTGCTGGGCCATCTTCCCGAAACACCCTCTCCCAGGC----CTGCCTGATGCCAGCTTTCTGCACAGCCCTGCTCGATGGTCaaca--gcagctggtgtgtactgagagctgactgtgtgccaggcactgtgctaagggctttacgtggttatcccatttaacactcccagcaaccctgcagggatagctattatccatccccattttacagaagaaaa-actgaggtt--cacaca-tgaagcatctggccaagggctctcatctgggaagtaa s ponAbe2.chr1 30029393 746 - 229942017 AAGCTGGCACT----TCCC-TCTCACA---------GG--------CACAGAATCCCGGGCCCCAGGCACCTGCTCCTTCCTGG-----------AGCTCAGCACCACCTTCCTTTCAGAACGCTGGGCCTGGGCCTGTCCTCAGCCGCTGCTGCCCTGCAGC----CCCTGCTGGGGGTCTCCCAGCCCTGCCTCCTTGGGGTCTGCCTCCATA-CCCCTGTctatactgttctcacccagtccagggcaccatcttctctccccagacactgcatagccaccctagtctcctggacccaggccctccccctccagttcacaggctgcatctgacatgaacagaccacgccccctctcaaagcccttcca----cggctccgctgctctgaggacaaaaatccc--------aacaa--cagcgtggaccgcagggccctcgtgaaacggccacatggacttctgcagccccatctttccc-actaccgtct-caca-------------------------------------------ctcaccccacAGAGCCAGCTGTGTGCAGGCCTCTGCGTATGCTGGGCCATCTTCCCGGAACACCCTCTCCGAGGC----CTGCCTGATGCCAGCTTTCTGCACAGCCCTGCTCTATGGTCAACA--GCAGATGGTGTGtactgagagcttactgtgtgccaggaactgtgctaagggctttacgtggttat-ccatttaacactcccagcaaccctgcagggatagctattatccatccccattttacagaagaaaa-actgaggtt--cagaca-tgaagcatctggccaagggccctcatctgggaagtaa i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33326485 789 + 229590362 AAGCTGACACT----TCCC-TCCCACA---------GG--------TACAGAATCCCGGGCCCCAGACACCTGCTCCTTCCTGG-----------AGCTCAGCACCACCTTCCTTTCTGAATGCTGGGCCTGGGCCTGTCCTCAGCCACTGCTGCCCTGCAGC----CCCTGCTGGGGGTCTCCCATCCCTGCCTCCTCAGGGCATCCCTCCATA-CCCCTGTctacactattctcacccagtccagagcaccatcttctctccctagacactgcacggccgctccagtctcctggacccaggctctccccgtccagttcacagactgcagctgacatgagtaggccatg-cccctctcaaagccctacca----tggctccaccactctgagcactaaaattcc--------aacag--cagtgtggactgcagggcccttgtgatatggccacatggacctctgcagtcccgtttttccc-actcccgtct-cacattcgccacacagagtcagctgtgtgcaggcctctgtgtgtgatttcgccacacagagtcagctgtgtgcaggcctctgtgtgtgatgggccatctttctaggacaccctctcccAGGC----CTGCCTGACGCCAGCTTTCTGCACAGCCCTGCTTGATGGTCAACA--GCAGATGGTGTGtattgagtgcttactgtgtgccaggcactatgctgcgggctttacatggttatcccatttaacactcccagcaaccctgcagggatagctattatccatccccattttacagaagaaaa-actgaggtt--cagaca-tgaagcatctggccaaggtctctcatctgggaagtaa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29837666 746 - 227556264 GAGCTGACACT----TCCC-TCCCACA---------GG--------TACAGAATCCCGGGCCCCAGACACCTGCTCCTTCCTGA-----------AGCTCAGCACCACCTTCCTTTCTGAATGCTGGGCCTGGGCCTGTCCTCAGCCACTGCTGCCCTGCAGC----CCCTGCTGGGGGTCTCCCATCCCTGCCTCCTCAGGGCGTCCCTCCATA-CCCCTGTctacactattctcacccagtccagagcaccatcttctctccctagacactgcacggccgctccagtctcctggacccaggctctccccgtccagttcacagactgcagctgacatgagtaggccatg-cccctctcaaagccctacca----tggctccaccactctgagcactaaaattcc--------aacag--cagtgtggactgcagggcccttgtgatatggccacatggacctctgcagtcccgtttttccc-actcccgtct-cacA-------------------------------------------TTCGCCACACAGAGTCAGCTGTGTGCAGGCCTCTGTGTGTGATGGGCCATCTTTCTAGGACACCCTCTCCCAGGC----CTGCCTGACGCCAGCTTTCTGCACAGCCCTGCTTGATGGTCAACA--GCAGATGGTGTGtactgagtgcttactgtgtgccaggcactatgctgcgggctttacatggttatcccatttaacactcccagcaaccctgcagggatagctattatccatccccattttacagaagaaaa-actgaggtt--cagaca-tgaagcatctggccaaggtctctcatctgggaagtaa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32603654 748 + 220367699 AAGCTCACACT----TCCC-TCCCACA---------GG--------TACAGAATCCCGGGCCCCAGACACCTGCTCCTTCCTGG-----------AGCTCAGCACCACCTTCCTTTCTGAATGCTGGGCCCGGGCCTGTCCTCAGCCGCTGCTGCCCTGCAGC----CCCTGCTGGGGGTCTCCCATCCCTGCCTCCTTGGGGCCTCCCTCCATACCCCCTGTCTACACTATTCTCACCCAGTCCAGAGCACCATCTTCTCTCCCTAGACACTGCACAGCAGCTCCAGTCTCCTGGACCCAGGCTCTCCCCGTCCAGTTCACAGGCTGCAGCCGACATGAACAGGCCATGCCCCCTCTCAAAGCCCTACCA----TGGCTCCACCGCTCTGAGCACTAAAATCCC--------AACAG--CAGTGTGGACTGCAGGGCCCTTGTGATATGGCCACATGGACCTCTGCAGTCCCGTCTTTCCC-ACTCGCGTCT-CACA-------------------------------------------TTCACCACACAGAGTCAGCTGTGTGCAGGCCTCTGTGTGTGTTGGGCCATCTTTCTAGGACACCCTCTCCCAGGC----CTGCCTGACACCAGCTTTCTGCACAGCCCTGCTCGATGGTCAACA--GCAGATGGTGTgtactgagtgcttactgtgtgccaggcactatgctgcGGGCTTTACATGGTTATCCCATTTAACACTCCCAGCAACCCTGCAGGGATAGCTATTatccatccccattttacagaagaaaa-actgaggtt--cagact-TGAAGCATCTGGCTAAAGTCTCTCATCTGGGAAGTaa i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28118898 747 - 130588469 AAGCTGACACT----TCCC-TCCCACA---------GG--------TACAGAATCCCGGGCCCCAGACACCTGCTCCTTCCTGG-----------AGCTCGGCACCACCTTCCTTTCTGAATGCTGGGCTTGGGCCTGTCCTCAGCCGCTGCTGCCCTGCAGC----CCCTGCTGGGGGTCTCCCATCCCTGCCTCCTCAGGGCGTCCCTCCATACCCCCTGTCTACACTATTCTCACCCAGTCCAGAGCACCATCTTCTCTCCCTAGACACTGCACAGCCGCTCCAGTCTCCTGGACCCAGGCTCTCCCCGTCCAGTTCACAGACTGCAGCCGACATGAGTAGGCCATG-CCCCTCTCAAAGCCCTACCA----TGTCTCCACCGCTCTGAGCACTATAATTCC--------AACAG--CAGTGTGGACTGCAGGGCCCTTGTGAAATGGCCACATGGACCTCTGCAGTCCCGTTTTTCCC-ACTCCCGTCT-CACA-------------------------------------------TTCGCCACACAGAGTCAGCTGTGTGCAGGCCTCTGTGTGTGATGGGCCATCTTTCTAGGACACCCTCTCCCAGGC----CTGCCTGACGCCAGCTTTCTGCACAGCCCTGCTCGATGGTCAATA--GCATATGGTGTGtactgagtgcttactgtgtgccaggcactatgctgcgggctttacatggttatcccatttaacactcccagcaaccctgcagggatagctattatccatccccattttacagaagaaaa-actgaggtt--cagaca-tgaagcatctggccaaggtctctcatctgggaagtaa i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64575457 754 + 155834243 AAGCTGGCACT----TCCCTTCCCACA---------GG--------CACAGAATCCCCGTCCTCAAACACGTGCTCCTTCCTGG-----------AGCTTGCTACCACCTTCCTTTCTGAATGCTGGGCCTGGGCCTGTCCTCAGCCCCTGCCTCCCTGCAGC----CCCTGGGGAGGTTCTCCCAGCCCTGCCTCCTTTCTGTCTCTCTCCATAGCCCCTGTCTACACTGTGCTCACCCAGCCCAGGATACCATCTTCTCTCTGCAGACACTACACAGCCTC-CCAGTCTCCTGGACCCAGGCCCTCCTGCTCCAGCTCACTGGCTGCAGCCTACAAGAACAGGCCATGCCCCCTCCCACCACCCTTCCATGGCTGGCTCAGCTGCTCCGAGGACTAAAATCCC--------AACCACCCAGCGTGGAATGCAGGGCCCTTGTGAAATGGCCACGCGGACCTCTGCAGCCTCATGTTTCCC-ACTCCCGCCC-CACA-------------------------------------------CTCATCCCACAGAGCCAGCTGTGTGCGGACCTCTGTGTGTCCTAGGCCGTCTTCCCAGAACCCCCTCTCCCAGGC----CTGCCCGATGCCAGCTTCCTGGACAGCCCTGCTCCATGGCCAGCA--GCagctggtgtgtactgagagcttgctgtttgccaggcactgtgctgtgggctttacatggctaccccagttaacactcccagcaaccctgcagggatagccattatccatccccatttcacagaagaaaa-actgaggtt--cagact-tgaagcatctggccaaggttatttgtctgagaagtaa i calJac3.chr7 I 4172 C 0 s mm10.chr4 25389262 634 - 156508116 AGACCGGCCCTCTCCTCCC-TCCCCGA---------AGACCTGTTACAGAGAATCTCTGGCC-CAGACATCTGTTACTTCTTAGGTTCTGG-TCCAGTTCAGCACTGCTACCAT----------------------------------CTGCTTCCCAGCAGCAGGTCCCTAGT-------TTCCAGACCTGACCTCTTGACCTCTCTGACCTCTGACCCTGACTACATAATCCTTACCCAGTGGCAGGCACTGTCTTCACACCTCAAACACTG---GCATGCCTTGACCACCAGGACGCAAGCTCTTTGCCCCC--CTCATAGGCTCCA----------------------------CAGAGCCCTCCCA----TAGCTCTCACACTC-----------ACACC--------AGACC--CAGCAGAGACCACAGGGCCCCTGTGACCTGGCTGTG-GGGCCTCAG----CCTGTGTGTTTC-AC---CTTTT-AGCA-------------------------------------------TCAATCTTGCAAGCCTACCGGAGTCCTGACTCC----------GTGCCAC------------CCCCTTCCCAGGCTCTTCTGCCCCAC-CCAGCCCTCTACACAGGTTTGTTC---------CA--GCCCAGGGCTtttgttgagcac--actctgtgcccagccttgggctgt-ggcttaaaatgactgccttactcagcactcccagtgaccct---ggggtaactgt--------cccatcctgtagttaggca-accaggatt--caaagaccaaagcaggcatccagaacacttggtcaggat----- i mm10.chr4 C 0 C 0 s canFam3.chr2 14968425 693 - 85426708 AGGCTGGACGC----CTCC-ACCCGCACGGGCCTGTGG--------CAAAGCTTCCCTGGCCCCAGACAC-TGCTCCTTCCCGGGGTCCGGCCCCAGCTCAGCACCTCCTCCCTT------------------------------CCCTTGCT-CCCTGCACC----CCCACCCAGGGGCCTCTC--CCCGACCTCTGT-----------------CCCTTGTCCCCACAGTCCCCACCTAGTCTAGAGCATCATCTTGTCTCCTCGGACACAGCACATCCAC-CTGGTGTCCTG---------CCCCCCCTTCCAGCGCCCAGTCCACAGCTCACGTGAACATGCCAGGCCCCCTCTCATGCGCCTTCCG----TGGCTCCCCTGCTCTGAGGATGAAAATCCTCCAGTTCACGTGG--TCATGTGAACTGCCGGGCCCCCGTGGGCCTGCTTCCTGGACCCCCCCAG--CCGTCCCTCCCTACTCCTGGCCAAACT-------------------------------------------CTGACCCCGCGGCCCCAGCTACGTGCAGGTCTC--------------CTCCCTCCTGGAGCAGACCTTCCAGGCCTTCCCTGCCTGACACCCGCCTCCTGCACAGCTTGGCTCAGCGGGCAGCACCACAGCTGG-ATGCCCAgagcagccactgtgctccag-------gctatggacggtgtatgattatctcatttaatactccatgtaccccg---gggaatattattatc----cccattttacagaagagaacattgaggttcgcagacg-tgaagctcctggccgaggtcactaggctgggaagt-- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 443241 3963 - 28733288 I e panTro4.chr1 30440334 1012 + 228333871 M a score=1650065.000000 s hg38.chr1_KI270760v1_alt 10483 557 + 109528 atggtggagctgggatttgag-tcaggtcATTTGCATGAGGTCGCTTCTGCCCATCCCAGGCACCTCTTC--CCAGGTTCAGGGCCCCTCCTCCACACTCCTGT--TTCCCCTGCACGAGCATTCGCCTGACTGTTCTGAAACTACTCATTTCCCAGTCTCCCCATGGGGCctgggctgtgagctccccaggacca-cgtgggtctctcct--gtctctgggccccagagcccagcatgggacccgatacatggtggacgcttggccagggtctgctgactgaGGAGTAGGGG--GCAGCCCTACTGGCAGCT-GGCCCCTCCCTCCCACACCCATCCCTTCTACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAATCACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCGAGCACCCTGCCTGGCA-GCCCCCACCCCACCCTCCATCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAGTGGTGGAGACCCCAGGAATTCAAGTCAGC s panTro4.chr1 30441346 556 + 228333871 ATGGTGGAGCTGGGATTTGAG-TCAGGTCATTTGCATGCGTTCGCTTCTgcc-atcccaggcacctcttc--ccgggttcagggcccctcgtccacactcctgt--ttcccctgcacgagcattcgcctgactgttctgaaactactcatttcccagtctccccatggggcctgggctgtgagctccccaggacca-cctgggtctctcct--gtctctgggccccagagcccagcatgggacccgatacatggtggacgcttggccagggtctgttgactgaGGAGTAGGGG--GCAGCCCTGCTGGCAGCT-GGCCCCTCCCTCCCACACCCATCCCTTCCACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAATCACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCGAGCACCCTGCCTGGCA-GCCCCCACCCCACCCTCCATCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAGTGGTGGAGACCCCAGGAATTCAAGTCAGC i panTro4.chr1 M 1012 C 0 s ponAbe2.chr1 30030139 560 - 229942017 atggtggagctgggatttgag-tcaggtcATTTGCACGAGGTCGCTACTGCCCATCCCAGGCACCTCTTC--CCGGGTTCAGGGCCCCTCCTCCACACTCCTGC--TTCCCCTGCACAAGCATTTGCCTGACTGTTCTGAAACTACTCATTTCCCAGTCTCCCCATGGGGCCTGGGCTGTGAGCTCCCCAGGACCA-CCTGGCTCTCACCT--GTCTCTGAGCCCCAGAGCCCAGTATGGGACCCGATACATGGTGGACGCTTGGCCAGGGTCTGCTGACAGAGGAGTAGGGG--GCAGCCCTGCTGGCAGCTGGGCCCCTCCCTCCCACACCCATCCCTTCCACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTACTTACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCAAGCACCCTGCCTGGAA-GCCCCCACCCCACCCTCCATCACAGACACTTCTGGAATCACAG--GAAATGGCGGGAAGTGGGAGTGGTGGAGACCCCAGCAATTCAAGTCAGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33327274 558 + 229590362 atggtggagctgggatttgag-tcaggtcATTTGCACAAGGTCACTTCTGCCCATCCCAGGCACCTTTTC--CCAGGTTCAGGGCCCCTCGTCCACACGCCTGT--TTCCCCTACACAAGCATTTGCCTGACTGTTCTGAAACTACCAATTTCCCATTCTCCCCATGGGGCctgggctgtgagctccccaggacca-cctgggtctcacct--gtctctaagccccagagcccagaatggaacccggtatatggtggacacttggccagggtctgctgactgaGGAGTAGGGA--GCAGCCCTGCTGGCAGCTGGGCCCCTGCCTCCCACACCCATCCCTTCCACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAGTCACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCGAGCACCCTGCCTGGCA-GCCCCCACCCCATCCTCCATCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAATAGTAGAGACCCCAGGAATTCAAGTCAGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29838412 557 - 227556264 atggtggagctgggatttgag-tcaggtcATTTGCACAAGGTCACTTCTGCCCATCCCAGGCACCTTTTC--CCAGGTTCAGGGCCCCTCGTCCATACGCCTGT--TTCCCCTACACAAGCATTTGCCTGACTGTTCTGAAACTACTAATTTCCCA-TCTCCCCATGGGGCctgggctgtgagctccccaggacca-cctggctctcacct--gtctctaagccccagagcccagaatggaacccggtatatggtggacgcttggccagggtctgctgactgaGGAGTAGGGA--GCAGCCCTGCTGGCAGCTGGGCCCCTCCCTCCCACACCCATCCCTTCCACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAGTCACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCGAGCACCCTGCCTGGCA-GCCCCCACCCCATCCTCCATCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAATAGTAGAGACCCCAGGAATTCAAGTCAGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32604402 558 + 220367699 atggtggagctgggatttgag-tcAGGTCATTTGCACAAGGTCACTTCTGCCCATCCCAGGCATCTTTTC--CCAGGTTCAGGGCCCCTCCTCCACACGCCTGT--TTCCCCTACACAAGCATTTGCCTGACTGTTCTGAAACTACCAATTTCCCAGTCTCCCCATGGGGCCTGGGCTGTGAGCTCCCCAGGACCA-CCTGGGTCTCACCT--GTCTCTAAGCCCCAGAGCCCAGAATGGAACCTGGTACATGGTGGACACTTGGCCAGGGTCTGCTGACTAAGGAGTAGGGA--GCAGCCCTGCTAGCAGCTGGGCCCCTCCCTCCCACACCCATCCCTTCCACCACTCGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAGTCACGGCTGCTCTTTTTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCAAGCACCCTGCctggca-gcccccaccccatcctccatCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAATAGTagagagcccaggaattcaagtcaGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28119645 556 - 130588469 atggtggagctgggatttgag-tcaggtcATGTGCACAAGGTCGCTTCTGCCCATCCCAGGCACCTTTTC--CCAGGTTCAGGGCCCCTCGTCCACACGCCTGT--TTCCCCTACACAAGCATTTGGCTGACTGTTCTGAAACTACCAATTTCCCA-TCTCCCCATGGGGCctgggccgtgagctccccaggacca-cctgggtctcactt--gtctctaagccccagagcccagaatggaacccggtacatggtggacacttggccagggtctgctgactgaGGAGTAGGGA--GTAGCCCTGCTGGCAGCTGGGCCCCTCCCTCCCACACCCATCCCTTCCACCACTCAATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAGTCACGGCTGCTCTTTCTGGAAACAATCTTCCCCAAATTGTCTGCAGAGAGGCGAGCACCCTGCCTGGCA-GCCCCCACCCCATCCTCCATCACAGACCCT--TGGAATCACAG--GAGATGGTGGGAAGTGGGAATAGTAGAGACCCCAGG-ATCCCAGTCAGC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64576211 561 + 155834243 atggtgaagctgggatttgag-ccaggtcATTTGCAAGAGGTCTCTTCTCTCCATCCCAGGTACctcccctgcctggttcagggcccctcgtccacactcctgtggttcccctatacaagcatttgcctgactgttctgaaactgccagtttcccg-tctccccatggggcctgggctgtgagctccccagggcca-cctgggtctcacct--gtctctgagccccagaacccaacatgggacccagtacactgtggatgcttgaccagggtctgctgaCAGATGAGTAGGGG--GCAGCCCTGCTGGCTGCTGGACCCCTCCCTCCCACATCCATCCCTTCTACTACTGGATACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAATCACGGCTGCTTTTTCTGGAAACAATCTTCCCCAAATTGTCTTCAGAGAGGCTAGCAGCCTTCCTGGCA-GTCCCCACCCCACCCTCCAACACAGACCCT--TGGAATCACAG--GAGATTGAGGGAAGTGGGAGTGGTGGAAACCCCAGGAATTCAAGTCAGC i calJac3.chr7 C 0 C 0 s mm10.chr4 25389896 448 - 156508116 gtggcacagatgggataagaacccagggcaactgtataatatcac--ctgct--ttccacccacct--gc--ccAGGTGAAGGATCCC------------------TTCC----------------------------------------------------------AGTCTAGGTTATGAGCTCTCTAA---------GGTTCTCACCCTAGTGGCTG-----------CCAGATTGGAGCCCAGCACATGTCACACAGTTTGCCAAGGTCTGCAAACTGAGGAGTAGGGA---CAG-CATAGTGGCTGCCGGGACCCTCCCTCCTCTGCCTGTCGCTCCTACCACTTGATCCCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACACTTCATTTGAGTTAATCATGGAAGCTCTTTCTAGAAGCCATCTCCCCCTAATTGTCTGCAGAAAAGCAAGTG-CCTGCCTAGCA-ACCCCA-------CCTCTGTCACAGAGCCC--TGGAGCCACAG--AAGGTGGTGACAGGTAGGAGGGGCTGCAAA-CCAGAAGCTAAAG---AC i mm10.chr4 C 0 C 0 s canFam3.chr2 14969118 521 - 85426708 --ggtagagctgggatttgaactcaggttatttgtgtgatgtcaaCCCTCCCCGCCCCACCCACCCC-TC--CCAGGTTTGGGGCCCCTCCTGCACACTCCTGTGTGTCCCCTGTACAAGCATCCGCCAGACTGT--------------CTCTCCATCCCCTGCATTGGGCCTGGGCTCTGAGCTCCCCACGGCCACCCTGGGGCACTCCT--GCCTCTGATCCCCAGA-CCCTGCACAGGGCCAGGTATATGGTGGACACTTGGCTAGAAACAG-TGCCCAAGGAGTGGGGGCCGCAGCCCTGCTGACTTCTGAGCCCCTCCCTCCCTCACTCTCCCCACCCACCACCCAACACCTCAGTAAGCAAAGCCTTTAAACCAAAAACAATTTTACAGTTCATTTGAGTTAATTTCAGCTGCTCTTTCTGGAAACCATCTTCCCCAAATTGTCTGCAGAGAAGC--GCGGCCTCCCTGGCAGGCCCCCTCCCCACC------------------TGGAATCACAGCCCAGA-GGTGGGAGGCAGGAGC--------CCTCAGGAATTCAAGTCCGC i canFam3.chr2 C 0 I 1703 e nomLeu3.chr24 443241 3963 - 28733288 I a score=273675.000000 s hg38.chr1_KI270760v1_alt 11040 126 + 109528 TGTCAAGCTGCATGTCGGctgtgataggcattggagtaccacagtcaaga--gatggaccccacccccaccctcatggggctcactgtat--aaaggaagagaaaaacatcaaacaaaccatcacacaag s panTro4.chr1 30441902 126 + 228333871 TGTCAAGctgcatgtcggctgtgataggcattggagtaccacagtcaaga--gatggaccccacccccaccctcatggggctcactgtat--aaaggaagagaaaaacatcaaacgaaccatcacaCAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30030699 126 - 229942017 TGTCAAGctgcatgtcggctgtgataggcattggagtaccacagtcaaga--gatggatcccacccccaccctcgtggggctcactgtat--aaaggaagagacaaacatcaaacaaaccatcacaCAAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33327832 126 + 229590362 TGTAAAGctgcatgtcggctgcgatagacattggagtaccacactcaaga--gatgggccccaccccgaccctcatggggctcactgtat--aaaggaagaggcgaacatcaaacaaatcatcacacaag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29838969 126 - 227556264 TGTAAAGctgcatgtcggctgcgatagacattggagtaccacactcaaga--gatgggccccaccccgaccctcatggggctcactgtat--aaaggaagaggcgaacatcaaacaaatcatcacacaag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32604960 126 + 220367699 TGTAAAGCTGCATGTCAGCTGCGATAAGCATTGGAGTACCACACTCAAGA--GatgggccccacccccaccctcatgGGGCTCACTGTAT--AAAGGAAGAGACGAACATCAAACAAATCATCACACAAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28120201 126 - 130588469 TGTAAAGctgcatgtcggctgcgataggcattggagtaccacactcaaga--gatgggccccaccccaaccctcatggggctcactctat--aaaggaagagacgaacatcaaacaaatcatcacacaag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64576772 85 + 155834243 TGTCAAGCTGCATTTTGGCTGTGATAGGCATTGGAGGACCACA-------------------------------------------GTAT--AAAGGAAGAGGCAAATATCAAACAAATCATCACACAAG i calJac3.chr7 C 0 C 0 s mm10.chr4 25390344 123 - 156508116 TGTCCAGCTGTGTGCCCACCGACCTGGGTGCTGCAGTACAGCAGGCAGCACCAATGG-------CTCGGTCTCCCCAAAACACACCACACGAAAGGGAAAAGACCACATTTAAACAAATCACCAagccag i mm10.chr4 C 0 I 2240 e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I a score=4370850.000000 s hg38.chr1_KI270760v1_alt 11166 1924 + 109528 tgattctgtagttagtactgagctgcaataagttaatcatgcagaaatctaaCAGtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcttattggcatcttcttcatggggtgttgagaacacaacgagatgggtaaagctcttaacctggcacctagttggtgtttaacatacattAAGAGCTCTGtcagtcagttccagctgccataacaagacacacgactgggaggcttaaataaaagaaattcatggtctctcagttcttgagcccagaaatctgggaccaaggtgttggcagagtgagtttcttctgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttttgttggacaaggccccatcctgtgacctcattttagcttaat-ccctctttgaaggccatctctccaaatatggagatcgtaaccttctcaggtattggaggttaggacttcaacattcaaatttgtggggaaacacaattcaccctgtaacgggatatgtccaagaaaattgagtatatatatccacaaatcacttatatgtaaattttcatagaagctttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagagaatggataaatatattgtgaagagtgataaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtag--atatatatataaaacatcatatattag--acatatatagaacatatatgaatatcacagacagggtcaacaaaaaacatctgccacaaaagacacatcctttacattcccattaatatgaacaagtctatagtgatattatagaacaatgaacatctctcagggttgggagattgactggaaaaggaaacaaagactttattggatgctagaaatgttctttgtcttgatttggctggtggttacatgggtgtacatctgtgtagaagttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTGGTAAATAGCCATTTATTTAGCTCACAATTCTAATGGCTGTCTGTGCAATTGATCGGGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTAGGGTCCACTAGTATTGCAGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACATTTGATATTCGGCAAGCTAtcagctggagcaccttcattcttttccatatggtctctgaccttccatcaagccagctcagactcattccatgtctccaagttcagc------------aaaaa------------agagaaagaccttatgggcaagcaattcaaaagcctctgtgtgtctactctttgttagtgtttcgattggccagagcaagtccattggccaacccagattgaagaggtggagaaataaacttccattcctgatggaaggatttgaaatgccaaatcacaaaagtacgaatgcagaagggaaagaatttatggtta-ttttacaacctaccacaTGTACACTTAATATTTATATATTTTACCATATGCAAGTTATATATTAATACAACAAATAGAAAAATATGGGGTTTGAGTCACATGATGACAACAGGTACTCTTGGTGTCAGTATGCTTGTAGGTTTCCTTGTTAGGGTCCCTGTTTTCTACATGGCCCCTAATTCTGCAGAGACAGTGTTGTTACAAGATGCATGTGAGTATATGTGTGTGGATGGGGAGTTGTAGCTTCACAACTTTCAGCCTCAGTCAGATTTCTCTCAAGTGGGATGGAGTGAGAGATGGGACTATCAATGG-ACTATATTGTGAAGAGCTGAACACAGGTACATCTGATGTTTACACAG---------------------GTAAACTTGAGGAAGTGGTAAACCTGATTTCTCAGCTGTAGAAGT s panTro4.chr1 30442028 1946 + 228333871 TGATTCTGTAGTTAGTACTGAGCTGCAATAAGTTAATCATGCGGAAATCTAACAGtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcctattggcatcttcttcatggggtgttgagaacacaacgagatgggtaaagcccttaacctggcacctagttggtgtttaacatacattAAGAGCTCtctcagtcagttccagctgccataacaagacacacgactgggaggcttaaataaaagaaattcatggtctctcagctcttgagcccagaaatctgggatcaaggtgttggcagagtgagtttcttctgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttttgttggacaaggccccatcctgtgacctcattttagcttaat-ccctctttaaaggccatctctccaaatatggagatcgtaaccttctcaggtattggaggttaggacttcaacattcgaatctgtggggaaacacaattcaccctgtaacgggatatgtccaagaaaattgagaatatatatccacaaatcacttatatgtaaattttcatagaagctttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagagaatggataaatatattgtgaagagtgataaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtag--agatatatataaaacaccatatattag--atatatatagaacatatatgaatatcacagacagggtcaacaaaaaacatctgccacaaaagacacatcctttacattcccattaatatgaacaagtctatagtgatactatagaacaatgaacatctctcagggttgggagattgactggaaagggaaacaaagactttattggatgctagaaatgttctttgtcttgatctggctggtggttacatgggtgtacatctatgtagaagttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTGGTAAATAGCCATTTATTTAGCTCACAATTCTAATGGCTGTCTGTGCAATTGATCGGGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGCAGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACATTTGATATTCGGCAAGCTAtcagctggagcaccttcattcttttccacatggtctctgaccttccatcaagccagctcagactcattccatgtctccaagttcagc------------aaaaa------------agagaaagaccctatgggcaagcaattcaaaagcctctgtgtgtctactctttgttagtgtttccattggccagagcaagtccattggccaacccagattgaagaggtggagaaataaacttccattcttgatggaaggatttgaaatgccaaatcacaaaagtatgaatgcagaagggaaagaatttatggtta-ttttacaacctaccacaTGTACACTTAATATTTATATATTTTACCATATGCAAGTTATATATTAATACAACAAATAGAAAAATATGGGGTTTGAGTCACATGATGACAACAGGTACTGTTGGTGTCAGTATGCTTGTAGGTTTCCTTGTTAGGGTCCCTGTTTTCTACATGGCCCCTAATTCTGCAGAGACAGTGTTGTTACAAGATGCATGTGAGTATATGTGTGTGGATGGGGAGTTGTAGCTTCACAACTTTCAGCCTCAGTCAGATTTCTCTCAAGTGGGATGGAGTGAGAGATGGGACTATCAATGGTACTATATTGTGAAGAGCTGAACAAAGGTACATCTGATGTTTACACAGGAACATCTGATGTTTACACACGTAAACTTGAGGAAGTGGCGAACCTGATTTCTCAGCTGCCGAAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30030825 1917 - 229942017 TGATTCTGTAGTTAGTACTGAGCTGCAATAAGTTAATCACACAGAAATCTAACAGtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcttattggcatcttcttcatggggtgttgagaac---acgagatgggtaaagcccttaacctggcacctagttggtgtttaacatacattAAGAGCTCtctcagtcgatttcagctgccatagcaagacatatgactgggaggcttaaataaaagaaattcattgtctctcagttcttgagcccagaaatctgggatcaaggtgttggcagagagagtttcttttgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttttgttggacaaggccccatcctgtgacctcattttagcttaatcccctctttaaaggccatctctccaaatatggagatggtaaccttctcaggtattggaggttaggacttcaacatacgaatttgtggggaaacaaaattcaccctgtaacaGGatatgtccaagaaaattgagtatatatatccagaaatcacttatatgtaaattttcatagaagctttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagagaatggataaatatattgtgaagagtgacaaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtag--agatatatataaaacatcatatgttag--atatatatagaacatatgtgaatatcacagacagggtcaacaaaaaacatctgccacaaaagacacatcctttacattcccattaatatgaacaagtctatagtgatattatagaacaatgaacatctctcagggttgggggattgactggaaagggaaacaaagactttattggatgctagaaatgttctttgtcttgatctggctggtggttacatgggtgtacatctgtgtaaaagttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATGGGGTGGTAAATAGCCATTTATTTAGCTCACAATTCTAATGGCTGTCTGTGCAGTTTATCAGGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGTGGATTACAGCTGGGTGATTTAAGGATGGTTTCACTCACACATTTGATATTTGGCAAGCTAtcagctggagcaccttctttcttttccatatggtctctgaccttccatcaagctagctcagactcattccatgtctccaagttcagc------------aaaaa------------agagaaagaccctatgggcaagcacttcaaaagcctctgtgtgtctactctttgttagtgtttccattggccacag-----ccattggccaacccaggttgaagaggtggagaaataaacttccattcttgatggaaggatttgaaatgccaaatcacaaaagtatgaatgcagaagggaaagaatttatggtta-ttttacaacctaccacaTGTACGCTTAAGATTTGTATATTTTACCATATGCAAGTTATATATTAATACAATAAATAGAAAAAGATGGGGTTTGAGTCACATGATGACAAAAGGTACTCTTGGTGTCAGTATGCTTGTAGGTTTCCTTATTAGGGTCCCTGTTTTCTACATGGCCCCTGATTCTGCAGAGACAGTGTTGTTAAAAGATGCATGTGAGTATATGTGTGTGGATGGGGAGTTGTAGCTTCACAACTTTCAGCCTCAGTCAGATTTCTCTCAGGTGGGATGGAGTGAGAGATGGGACTATCAATGG-ACTATATTGTGAAGAGCTGAACACAGGTACATCTGATGTTTACACAG---------------------GTAAACTTGAGGAAGAGGTAAACCTGATTTCTCAGTTGTAGAAGT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33327958 1910 + 229590362 tgattctgtagttagtactaagctgcaataagttagttatgcagaaatctaaCAAtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcctattggcatcttcctcatggggtgttgagaacacaacaagatgcgtaaagcccttaacctggcacctagttagtgtttaacatacattAAGAGCTCtctcagtcagttccagctgccataacaagacacaagactgggaagctgaaataaaagaaattcattgtctctcagttcttgagcccagaaatctgggaccaacgtgttggcagggtgagtttcttctgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttatgttggacaaggccccaccctgtgacctcattttagtttgatcctctctttaaaggccatctctccaaatatagagatggtcacattctcaggtattggaggttaggactgcaacatatgaatttgtggggaaacacgattcaccctgtaacaGGatatatccaagaatattgagtacatgtatccacaaatcacttatatgtaaattttcatagaagatttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagaaaatggataaatatattgtgaagagtgataaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtac--atatatatataaaacatcatatattag----atagagagaacatatatgaatatcacagacagggtcaacaaaaaacatctaccacaaaagacacatcctttacattcccattaatatgaacaaatctatagtgatattatagaacaatgaatatctctcagggttgggggattgcctggaaagggaaacaaagacttccttggatgctagaaatgttctttatcttgatctggctggtggttacatgggtgtacatctgtgtaaaatttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTGGTAAGTAGCCATTTATTTAGCTCACAATTCTAATGGTTGTTTGTGCAATTGATCAGGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGTGGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACATCTGATAGTCAGCAAGCTAtcagctggggcaccttcattcttttccatatggtctctgactttccatcaagctagctcagactcattccatgtctccaagttcagc---------aaaaaaaa------------agagaaagaccctatgggcaaacacttcaaaagcctctgtatgtctactctttgttagtgtttccattgaccagagcaagtccattggccaacctagatggaagaggtggaaaaatagacttccattcttgatggaaggatttgaaatgccaaatcacaaaagtatgaaatcagaatggaaagaatttatggtta-ttttacaacctaccacaTGTACACTTAA----------------CATATGCAAGTTATATATTAATACAATAAATAGAAAAATACAGGGTTTTAGTCAAATGATGACAAAAGGCACTCTTGGTGTCAGTATGCTTGTAGGTTTCCTTGTTAGGGTCCCTGTTTTCTACATGGCCCCTGATTATGTAGAGACAGTGTTGTTACAAGATGCGTGTGAGTATATGTGTGTGGATGGGAAGTTGTCACTTTACAACTTTCAGCCTCAGTCAGATTTCTCTCAGGTGGGATGGAATGAGAGATGGGACTATCAATGG-ACTATATTGTGAAGAGCTGAACATAGGTACATCTGATGTTTACACAG---------------------GTAAACTTGAGGAACAGGTAAACCTGACTTCTCAGCTGTAGAAGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29839095 1910 - 227556264 tgattctgtagttagtactaagctgcaataagttagttatgcagaaatctaaCAAtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcctattggcatcttcctcatggggtgttgagaacacaacaagatgggtaaagcccttaacctggcacctagttagtgtttaacatacattAAGAGCTCtctcagtcagttccagctgccataacaagacacaagactgggaagctgaaataaaagaaattcattgtctctcagttcttgagcccagaaatctgggaccaacgtgttggcagggtgagtttcttctgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttatgttggacaaggccccaccctgtgacctcattttagtttaatcctctctttaaaggccatctctccaaatatagagatggtcacattctcaggtattggaggttaggactgcaacatatgaatttgtggggaaacacgattcaccctgtaacaGGatatatccaagaatattgagtacctgtatccacaaatcacttatatgtaaattttcatagaagatttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagaaaatggataaatatattgtgaagagtgataaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtac--atatatatataaaacatcatatattag----atagagagaacatatatgaatatcacagacagggtcaacaaaaaacatctaccacaaaagacacatcctttacattcccattaatatgaacaaatctatagtgatattatagaacaatgaatatctctcagggttgggggattgcctggaaagggaaacaaagacttccttggatgctagaaatgttctttatcttgatctggctggtggttacatgggtgtacatctgtgtaaaatttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTGGTAAGTAGCCATTTATTTAGCTCACAATTCTAATGGTTGTTTGTGCAATTGATCAGGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGTGGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACATCTGATAGTCAGCAAGCTAtcagctggggcaccttcattcttttccgtatggtctctgactttccatcaagctagctcagactcattccatgtctccaagttcagc---------aaaaaaaa------------agagaaagaccctatgggcaaacacttcaaaagcctctgtatgtctactctttgttagtgtttccattgaccagagcaagtccattggccaacctagatggaagaggtggaaaaatagacttccattcttgatggaaggatttgaaatgccaaatcacaaaagtatgaaatcagaatggaaagaatttatggtta-ttttacaacctaccacaTGTACACTTAA----------------CATATGCAAGTTATATATTAATACAATAAATAGAAAAATACAGGGTTTTAGTCAAATGATGACAAAAGGCACTCTTGGTGTCAGTATGCTTGTAGGTTTCCTTGTTAGGGTCCCTGTTTTCTACATGGCCCCTGATTATGTAGAGACAGTGTTGTTACAAGATGCGTGTGAGTATATGTGTGTGGATGGGAAGTTGTCGCTTTACAACTTTCAGCCTCAGTCAGATTTCTCTCAGGTGGGATGGAATGAGAGATGGGACTATCAATGG-ACTATATTGTGAAGAGCTGAACATAGGTACATCTGATGTTTACACAG---------------------GTAAACTTGAGGAACAGGTAAACCTGACTTCTCAGCTGTAGAAGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32605086 1938 + 220367699 TGATTCTGTAGTTAGTACTAAGCTGCAATAAGTTAATTATGCAGAAATCTAACAATAGTAACTATACAAACCTGGTAATTTGTTAAACCTCTtggagcctctgtttcctcatttgtaaaatggggatcctATTGGCATCTTCCTCATGGGGTGTTGAGAACACAACAAGATGGGTAAAGCCCTTAACCTGGCACCTAGTTGGTGTTTAACATACGTTAAGAGCTCTCTCAGTCAGTTCCAGCTGCCATAACAAGACAGAAGACTGGGaggctgaaataaaagaaattgattGTCTCTCAGTTCTTGAGCCCAGAAATCTGGGATCAACATGTTGGCAGGGTGAGTTTCTTCGGTCTCTTCTCTTGGCTTGTAGGTGGTCATGTTCTCTCTGTGTCCTTATGTTGGAGAAGGCCCCACCCTGTGACCTCATTTTAGTTTAATCCTCTCTTTAAAGGCCATCTCTCCAAATATGGAGATGGTCACATTCTCAGGTATTGGAGGTTAGGACtacaacatatgaatttgtggggAAACACGATTCACCCTGTAACAGGATATATCCAAGAATATTGAGTACATGTATCCACAAATCACTTATATGTAAATTTTCatagaagttttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagaaaatggataaatatattGTGAAGAGTGATAAAATTGAAATACacagaatttttc-aaaaataaacaaactacatatatatgtac--atatatatatataacatcatatattagagatatatagagaacatatatgaatatCACAGACAGGGTCAACAAAAAACCTCTACCACAAAAGACACATCCTTTACATTCCCATTAATATGAACAAATCTATAGTGATATTATAGAACAATGAATATCTCTCAGGGTTGGGGGATTGCCTGGAAAGGGAAACAAAGACTTCCTTGGATGCTAGAAATGTTCTTTATCTTGATCTGGCTGGTGGTTACATGGGTGTACATCTGTGTAAAATTTCATAGAGCTATCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTGGTAAATAgccatttatttagctcacaatTCTAATGGCTGTTTCTGCAATTGATCAAGTCTAGTCTAGCTCAGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGTGGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACATCTGATAGTCAGCAAGCTATCAGCTGGGGCACCTTCATTCTTTTCCGTATGGTCTCTGACTTTCCATCAAGCTAGCTCAGACTCATTCCATGTCTCCAagttcagcaaaaaaaaaaaaaaaaa------------agagaaagaccctATGGGCAAGCACTTCAAAAGCCTCTGTATGTCTACTCTTTGTTAGTGTTTCCATTGACCAGAGCAAGTCCATTGGCCAACCTAGATGGAAGAGGTGGAGAAATAGACTTCCATTCTTGATGGAAGGATTTGAAATGCCAAATCACAAAAGTATGAAATCAGAATGGAAAGAATTTATGGTTA-TTTTACAACCTACCACATGTAcacttaatatttgtatattttaccatatgcaagttatatattaatacaataaatagaaaaatacaggGTTTGAGTCAAATGATGATAAAAGGCACTCTTGGTGTCAGTATGCTTGTAGATTTCCTTGTTAGGGTCCCTGTTTTCTACATGGACCCTGATTATGTAGAGACAGTGTTGTTACAAGATGcgtgtgagtatatgtgtgtggATGGGAAGTTGTCACTTCACAACTTGCAGCCTCAGTCAGATTTCTCTCAGGTGGGATGGAGTGAGAGATGGGACTATCAA-GG-ACTATATTGTGAAGAGCAGAACATAGGTACATCTGATgtttacacag---------------------gtaaacttgagGAACAGGTAAACCTGATTTCTCAGCTGTAGAAGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28120327 1953 - 130588469 tgattctgtagttggtactaagctgcaataagttaattatgcagaaatctaaCAAtactaactatacaaacctggcaatttgttaaacctcttggagcctctgtttcctcatttgtaaaatggggatcctactggcatcttcctcatggggtgttgagaacacaacaagatgggtaaagcccttaacctggcacctagttggtgtttaacatacattAAGAGCTCtctcagtcagttccagctgccataacaagacacaagactggaaggctgaaataaaagaaattcattgtctctcagttcttgagcccagaaatctgggatcaaggtgttggcagggtgagtttcttctgtctcttctcttggcttgtaggtggtcatgttctctctgtgtccttatgttggacaaggccccaccctgtgacctcattttagtttaatcctctctttaaaggctgaatctccaaatatggagatggtcacattctcaggtattggaggttaggactgcaacatatgaatttctggggaaacacgattcaccctgtaacaGGatatatccaagaatattgagtacatgtatccacaaatcacttatatgtaaattttcatagaagctttatttataatagtttaaaaagaaaataacccaaatgtccatctatgagaaaatggataaatatattgtgaagagtgataaaattgaaatacacagaatttttc-aaaaataaacaaactacatatatatgtacatatatatatataaaacatcatatattagatatatatatagaacatatatgaatatcacagacagggtcaacaaaaaacatctaccacaaaagacacatcctttacattcccattaatatgagcaaatctgtagtgatattatagaacaatgaatatctctcagagttgggggattgcctagaaagggaaacaaagacttccttggatgctagaaatgttctttatcttgatctggctggtggttacatgggtgtacatctgtgtaaaatttcatagagctatCTCCATCAGCTTTTGCTCAAAATACAAATTGGGTAGTAAATAGCCATTTATTTAGCTCACAATTCTAATGGCTGTTTGTGCAATTGATCAGGTCTAGTCTAGCTCGGGTCATCTCTCCTGAGTCTATGGTCCACTAGTATTGTGGATTACAGCTGGATGATTTAAGGATGGTTTCACTCACACACCTGAGAGTCGGCAAGCTAtcagctggggcatcttcattcttttccgtatggtctctgactttccatcaagctagcacagactcattccatgTCTCCAAGTTCAGCCaaaaaaaaaaaaaaaaaaaaaGAGAGagagagaaagaccctatgggcaagcacttcaaaagcctctgtatgtctactctttgttagtgtttccattgaccagagcaagtccattggccaacccagatggaagagctggagaaataaacttccattcttgatggaaggatttgaaatgccaaatcacaaaagtatgaaatcagaatggaaagaatttatggtta-ttttacaacctaccacatgtacacttaagatttgtatattttaccatgtgcaagttatatattaatACAATAAATAGAAAAATAGAGGGTTTGAGTCAAATGATGACAAAAGGCACTCTTGGTGTCAGTATGCTTGTAGGTTTCCTTGTTAGGGTCCCTGTTTTCTACATGGCCCCTGATTATGTAGAGACAGTGTTGTTACAAGATGCGTATGAGTATATGTGTGTGGATGGGAAGTTGTCGCTTCACAGCTTGCAGCCTCAGTCAGATTTCTCTCAGGTGGGATGGAGTGAGAGATGGGACTATCAATGG-ACTATATTGTGAAGAGCTGAACATAGGTACATCTGATGTTTACACAG---------------------GTAAACTTGAGGAAGAGGTAAACCTGATTTCTCAGCTGTAGAAGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64576857 1848 + 155834243 TGATTCTGTAGTTAGTACTGAGCTGCAGTAAGTTAATCATGCAGAAGTCTAACAGtactaactatacaaacctggcaatttgttaaacctctaggagcctctgtttcctcacttgtaaaatgggggtttt--tggcatcttcctcgtggggtgttgagaacacaatgagatgggtgaagcccttaacctggtacctat-----------catacattaagagctctcccagtcagttcaggctgccataacgagacacaaaactgggaggcttaaataaaagaaattcattg----tcagttcttgagcccagaaatctgggatccaggtgttggcagggtgagtgtcttctgtctcttctcttggc-tataggaggtcatgttctctc--tgtctgtatgttggacgaggacccaccctgtgacctcattttagtataatccccactttaaacgccatctgtccaaatatggagatggtcacattctcaggtattggaggttaagactttaacata-gaattttgggggaaacacagttcagtctgtaacaGAatatttccaagaaaattgagttcatatatccacaaatcacttatatataaatttttatagaagctttatttttaatagttttataagaaaataacccaaatgttcatctataagaaaatagataaatatattgtggagaatgataaaatggaaatacacagaatttttcaaaaaatgaacaaactacacatatatgttg------acatatacaatatcatatg------atatatatgtaacatatatgaatatc----acagtgtcaacaaaaaacatctgccacaaaagacacatcctttacattctcattaacatgaacaagtctatagtgatactatagaacactagatatctctcagggttggggaattga-tggaaagggggacaaagactttctcagatgctagaaatgttctctgtcttaatctggctggtggttacatgggtgcacatctgcg-aaaaattcaAAGAGGTACCCCCATCAGCTTTTGCTCAAACTATAAATTGGGTG----ATAGTCATTTATTGAGCTCACAATTCAAATGGCTGTGTGTGCCGTTTATCAGGTCTAGTCTAGCTTATGTCATCTCTCCTGAGTCTGTGGTCCACTAGTATTGTGGTTTACAGCTGGATGATTTAAGGATTATTTCAGTCACACATCTG-CAGTCAGCAAGCAAtcagctggggcaccctcatcctttttcatgtgatctctcaccttccagcaggttagtgcagactcattccatgtctccaagtgctgc------------aagaa------------agagaaagaccctgtgggtaagcacgtcaagagcctctgttcatctgctcttcgttagcatttccattggctagagcaagtccattggccaacccaaattg-----------aaagagacttccagtcttgattgaaggatttgaagtgccagatcacaaaagaatgaattcagagaggaaataatttatggttatttttaaaaccTACCACATGTACATTT---------------TACCATATACAAGTTATATATTAATACGACAAAC--AAAAATACAGGGTTTGAGTCA-ATGATG---------AATATTGGTGTCGATGTGCTTGTAGGTTTCCTTGTTAAGGT-TCTGTTTTCTACAGGGCCCCCGATTCTGTAGAGACAGTGTTATTACAAGATGCATGTGAGTATGTGTGTGTGGATGGAGAATTGTAGCATCATAACTTTCAGCCTCAGTCAGATTTCTTTCAGGTGGGATGCAGTGAGAGATGGGACTGTCAATGG-ACTACATCGTGAATATCTCGACACAGGTATACGTGATGTTTACACAG---------------------GTGAACTTGAAGAACAGGTAACATTGATTTCTCAACTGTAGAAAT i calJac3.chr7 C 0 C 0 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I a score=142111.000000 s hg38.chr1_KI270760v1_alt 13090 77 + 109528 CAGGCTGAGAggccaggcacggtggctcacacctgtaatcccagtactttgggaggctgaggcaggcagatcatgag s panTro4.chr1 30443974 76 + 228333871 CAGGCTCAGAggccaggcacggtggctcacacctgtaatcccaggactttgggaggatgaggca-gcagatcatgag i panTro4.chr1 C 0 M 873 s ponAbe2.chr1 30032742 77 - 229942017 CAGGCTGAGAggccaggcacggtggctcacacctgtaatcccagtactttgggaggctgaggcaggcagatcatgag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33329868 77 + 229590362 CAGGCTGAGAggccaagcacggtggctcacacctgtaatcccagtactttgggaggctgaggcgggtagatcatgag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841005 77 - 227556264 CAGGCTGAGAggccaagcacggtggctcacacctgtaatcccagtactttgggaggctgaggcaggtagatcatgag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607024 77 + 220367699 CAGGctgagaggccaggcacggtggcttacacctgtaatcccagtactttgggaggctgaggcgggtagatcacgag i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28122280 77 - 130588469 TAGGCTGAGAggccaggcacggtggctcacacctgtaatcccagtactttgggaggctgaggcgggtagatcatgag i chlSab2.chr20 C 0 C 0 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I e calJac3.chr7 64578705 0 + 155834243 C a score=243787.000000 s hg38.chr1_KI270760v1_alt 13167 273 + 109528 gtcaggagatcgagaccatcctggccaacacggtgaaaccccgtctctactaaaaatacaaaaattagttggatatggtggcgtgcgcctgtaatcccagctactcagtaagctgaggcaggagaatcacttgaacctgggaggcaggggttgctgtgagccaagactgagccacatgcactccagcctggccacagagggagactctgtcgaaaagaaaggggaggagagtggagggaagggaagaggggaggggagggga---ggggaggggag---------------------- s ponAbe2.chr1 30032819 270 - 229942017 gtcaggagatcgagaccatcctggccaacatggcgaaattctgtctctactaaaaatacaaaaattagctggatatggtggtgtgcacctataatcccagctactcagtaggctgaggcaggagaatcacttgaacccgggaggcgggggttgcagtgagccaagattgagccacatgcactccagcctggccacagagggagactctgtcgaaaagaaa---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggagggga---ggggaggggag---------------------- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33329945 250 + 229590362 gtcaggggatggaggccatccttgccaacagggcgaagtctcttctctactaaaaatacaaaaattagctgggt-------catgcacctgtaatcccagctactcgggaggctgaggcaggtgcatcacttgaacccgggaggcgggggttgccgggagtcaagattgagccac-tgcactccagcctggccacagagtgagactccgtcGACAAGAAAGggaaa----------------------gggaggggaggagaagtggggaggggaggagc------------------ i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841082 250 - 227556264 gtcaggggatggaggccatccttgccaacagggcgaagtctcttctctactaaaaatacaaaaattagctgggt-------catgcacctgtaatcccagctactcgggaggctgaggcaggtgcatcacttgaacccgggaggcgggggttgcagtgagtcaagattgagccac-tgcactccagcctggccacagagtgagactccgtcgacaagaaagggaaa----------------------gggaggggaggagaagtggggaagggaggagc------------------ i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607101 286 + 220367699 gtcaggagatggaggccatcctggccaacagggcgaaatcccatctctactaaaaatacaaaaattagctgggt-------catgcacctgtaatcccagctactcgggaggctgagtcaggagcatcacttgaacccgggaggcgggggttgcagtgagccaagattgagtcac-tgcactccagcctggccaccaagcgagactccgtcgaaaaaaaagggaaaggcag----gggaggagaggcggggaggggaggagaggcggggaggggaggagcggggggaggggaggggag i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28122357 236 - 130588469 gtcagaagatggaggccatcctggccaacagggcgaaatcccatctctactaaaaata---------------------------cacctgtaatcccagctactcgggaggctgaggcaggagcatcacttgaacccgggacgcgggggttgcagtgagccaagattgagccac-tgcgctccagcctggccaccgagtgagactccatcgaaaagaaagggaaa----------------------gggaggggaggagaggctgggaggggaggaac------------gggaag i chlSab2.chr20 C 0 C 0 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I e calJac3.chr7 64578705 0 + 155834243 C e panTro4.chr1 30444050 873 + 228333871 M a score=25784.000000 s hg38.chr1_KI270760v1_alt 13440 32 + 109528 gggaggggaggggagggaagggaagggaaggg s panTro4.chr1 30444935 29 + 228333871 gggaggggaggggaagg---ggaggggaaggg i panTro4.chr1 M 873 C 0 s ponAbe2.chr1 30033089 2 - 229942017 ------------------------------gg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33330195 28 + 229590362 ----ggggaggggagggaagcagagggaaggg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841332 28 - 227556264 ----ggggaggggagggaagcggagggaaggg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607387 32 + 220367699 gggaggggaggggaggggaggggaggggaggg i papAnu2.chr1 C 0 I 352 s chlSab2.chr20 28122593 32 - 130588469 ggaagggaagggaagggaagggaagggaaggg i chlSab2.chr20 C 0 I 1 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I e calJac3.chr7 64578705 0 + 155834243 C a score=40040.000000 s hg38.chr1_KI270760v1_alt 13472 27 + 109528 aagggaag-ggaagggaagggaagggaa s panTro4.chr1 30444964 28 + 228333871 gaggggagtggaaggggaggggagggga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033091 27 - 229942017 gaggggag-gggaaggaagggaagggaa i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33330223 27 + 229590362 aagggagg-ggaagggaagggaagggaa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841360 27 - 227556264 aagggagg-gggaggggagggaagggaa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607771 27 + 220367699 aggggaag-ggaagggaagggaagggaa i papAnu2.chr1 I 352 C 0 s chlSab2.chr20 28122626 27 - 130588469 agggaagg-gtaagggaagggaagggaa i chlSab2.chr20 I 1 I 374 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I e calJac3.chr7 64578705 0 + 155834243 C a score=32374.000000 s hg38.chr1_KI270760v1_alt 13499 19 + 109528 ggg-aagggaagggaaggga s panTro4.chr1 30444992 20 + 228333871 ggggaaggggagggaagggA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033118 19 - 229942017 ggg-aagggaagggaaggga i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33330250 19 + 229590362 gga-aaggaaagggaaggga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841387 19 - 227556264 ggg-aaggaaagggaaggga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607798 19 + 220367699 ggg-aagggaagggaagaga i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123027 19 - 130588469 ggg-aagggaagggaaggga i chlSab2.chr20 I 374 C 0 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I e calJac3.chr7 64578705 0 + 155834243 C a score=109196.000000 s hg38.chr1_KI270760v1_alt 13518 47 + 109528 caggCTGAGAAATGAGCCAGGGAAGTGCGATGTCCTGGGTCAGTTGT s panTro4.chr1 30445012 47 + 228333871 CAGGCTGAGAAATGAGCCACGGAAGTGCGATGTCCTGGGTCAGTTGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033137 47 - 229942017 CAGACTGAGAAATTAGCCAGGGAAATGCGATGTCCTAGGTCAATTGT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33330269 47 + 229590362 CAGGCTGAGAAATGAGCCAGGGAAGTGCGATGTCCTGGGTCAGTTGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841406 47 - 227556264 caggCTGAGAAATGAGCCAGGGAAGTGCGATGTCCTGGGTCAGTTGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607817 46 + 220367699 cagGCTGAGAAATGAGCCA-GGAAGTGCAGCGTCCTGGGTCAGTTGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123046 47 - 130588469 caggCTGAGAAATGAGCCAGGGAAGTGCGATGTCCTGGGTCAGTTGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64578705 47 + 155834243 CAGGCTGAGAAATGAGCCCGGGAAAAGCAATGTCCTGGGTCAGTTGT i calJac3.chr7 C 0 C 0 e mm10.chr4 25390467 2240 - 156508116 I e nomLeu3.chr24 443241 3963 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I a score=99440.000000 s hg38.chr1_KI270760v1_alt 13565 40 + 109528 TTCAGCACCATGGAGTGCTCTGATGGACCTTAAAGGACCT s panTro4.chr1 30445059 40 + 228333871 TTCAGCACCATGGAGTGCTCTGATGGACCTTAAAGGACCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033184 40 - 229942017 TTCAGCACCATGGAGAGCTCTGATGGACGTTAAAGGACAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 447204 40 - 28733288 TTTAGCACCATGGACAGCTACCAGGGCTGCGAGATGGCTT i nomLeu3.chr24 I 3963 C 0 s rheMac3.chr1 33330316 40 + 229590362 TTCAGCACCATGGAGAGCTCTGATGGACGTTAAAGGACGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841453 40 - 227556264 TTCAGCACCATGGAGAGCTCTGATGGACGTTAAAGGACGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607863 40 + 220367699 TTCAGCACCATGGAGAGCTCTGATGGACGTTAAAGGACGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123093 39 - 130588469 TTCAGCACCATGGAGAGCTCTGATGGACGTT-AAGGACAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64578752 40 + 155834243 TTCAGCACCATGGAGAGCTCTAATAGGAGTTAAAGGACAT i calJac3.chr7 C 0 C 0 e mm10.chr4 25390467 2240 - 156508116 I e canFam3.chr2 14969639 1703 - 85426708 I a score=463695.000000 s hg38.chr1_KI270760v1_alt 13605 167 + 109528 TTCTCTTCATAGTCCCAGGATCGCTCATTTCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAAGAGAAATTTACTCTTGCAAACTTTACATTGTTAGCAGGAGTGATGgcatgggctctggagcc------------aaactgcctgtgttcccgtcttggttgcaccacaca------agctgt s panTro4.chr1 30445099 167 + 228333871 TTCTCTTCATAGTCCCAGGATCGCTCATTTCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAAGAGAAATTTACTCTTGCAAACTTTACATTGTTAGCAGGAGTGATGgcatgggctctggagcc------------aaactgcctgtgttcccgtcttggttgcaccacaca------agctgt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033224 167 - 229942017 TGCTCTTCGTAGTCCCAGGATCGCTCATTTCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAAGAGAAATTTACTCTTGCAAACTTTACATTGTtagcagaagtgatggcatgggctctggagcc------------aaactgcctgtgttcccgtcttggttgcaccacaca------agctgt i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 447244 173 - 28733288 TTCTCTTCAGACTCCTGGGATCACTCGGTTCC--------CTGTCTTCTAAATGGAATTATCTGGATGATAAAGGAAATTTGCTCTTGCAATC-ACACATTGTGACCAGGAACGagaaaactgactctggaacg------------agatgacctgaattcaaatccttgctccactgcttactatttaatagt i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33330356 167 + 229590362 TTCTCTTCATAGTCCCAGGATCGCTCATTCCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAACAGACATTTACTCTTGCAAACTTTACATTGTtagcagaagtgatggcatgggccctggaacc------------aaactgtctgtgttcccgtcttggttgcaccacaca------agctgt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841493 167 - 227556264 TTCTCTTCATAGTCCCAGGATCGCTCATTCCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAACAGACATTTACTCTTGCAAACTTTACATTGTTagcagaagtgatggcatgggccctggaacc------------aaactgtctgtgttcccgtcttggttgcaccacaca------agctgt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32607903 167 + 220367699 TTCTCTTCACAGTCCCAGGATCTCTCATTCCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAAGAGACATTTACTCTTGCAAACTTTACATTGTTAGCAGAAGTGATGGCATGGGCCCTGGAACC------------AAACTGTCTGTGTTCCCATCTTGGTTGCGCCACACA------AGCTGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123132 167 - 130588469 TTCTCTTCGTAGTCCCAGGATCGCTCATTCCCCT------CTGTCTTCTAGGTAAAATTATCTG---GTTAAGAGACATTTACTTTTGCAAACTTTACATTGTTAGCAGAAGTGATGgcatgggccctggaacc------------aaactgtctgtgtttccgtcttggttgcaccacaca------agctgt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64578792 167 + 155834243 CTGTCTTCAAAGTTCCAGGACCGCTCATTTCCCT------CTGTCTTCTAGGTAAAATTCTCTG---TTTAAGACAAATTTACTTTCGCACACTTTACATTGTTAGCAGAAATGATGgcatgggctctggaact------------gaaccacctgagtcccagtcttggttgcaccacaca------agctgt i calJac3.chr7 C 0 C 0 s mm10.chr4 25392707 163 - 156508116 TTCTTTTCACAACCCT--------TCCTTTCCCTGGTTCCTTGATTTCTGGAGAGAATTCTCTG---GTTAAATGCAGTTCACCCTTGC--------------TGCCAGAAATGAGGGTATAGACTCTGGGACCTTAGGAAATCAAGAATTTTCTAGCACGAAGTCTTTCCTGCCCCATACA------AGCTGT i mm10.chr4 I 2240 I 647 e canFam3.chr2 14969639 1703 - 85426708 I a score=131654.000000 s hg38.chr1_KI270760v1_alt 13772 49 + 109528 gactttg----ggagaagttacttaacctctgtgcaatgt------gccttatctgtca s panTro4.chr1 30445266 49 + 228333871 gactttg----ggagaagttacttaacctctgtgcaatgt------gccttatctgtca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033391 49 - 229942017 gacttag----ggagaagttacttaacctctgtgcaatgt------gctttatctgtca i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 447417 59 - 28733288 tacatagtcttggacaagtttcttaacctctctatgctgtggctgagtcttatctgtca i nomLeu3.chr24 C 0 I 4 s rheMac3.chr1 33330523 49 + 229590362 gactttg----ggagaagttactcaacctctgtgccatgt------gctttatctatca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841660 49 - 227556264 gactttg----ggagaagttactcaacctctgtgccatgt------gctttatctgtca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32608070 49 + 220367699 GACTTTG----GGAGAAGTTACTCAACCTCTGTGCCATGT------GCTTTATCTGTCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123299 49 - 130588469 gactttg----ggagaagttactcaacctctgtgccatgt------gctttatctgtca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64578959 49 + 155834243 gactttg----ggagaagttacttaacctctgtgccatgt------gctttatctgtca i calJac3.chr7 C 0 C 0 e mm10.chr4 25392870 647 - 156508116 I e canFam3.chr2 14969639 1703 - 85426708 I a score=3415156.000000 s hg38.chr1_KI270760v1_alt 13821 1524 + 109528 tgagaaaaataatggtagctacttcataggattgtggtgaggacaaattcaaattaaagaaagtaaagagcttaacatagtggctggcacatggtaagtactaaaaagttagctattattATGGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTGCATAAGATGGAAAAGATTAAGAAGACCTCCTTCACCCCAGATGCCGGAAAAATTTGTTATATAACCTCATGTGAACTATATGAACTACCCAGACCCCATTCCCATTCTGTAAAATGATGCGATTTGCTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGTGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaataataaaataaaacaaaaatgatataataaaataaaaatgaaatTTAAAAAGATTTTACACTAAATGGCCTTTATGGCCCCAATAAGCCCTATCTGTTCCCGGTCTTGGATGCAGGACTCGGGGGTGGATAGA-GTCAAGATGGGGGTTTGGTAAGAAGTGAGGACTTTGGGG-CAGCCTGGAAGAGGACTCAAAAAGAGCACATTGAGCATGTCAAGGCTTTTAGTTCTTACATTATCTCCCCCACTCCCACTCTCACTTGCCCAATTTATTGTGCTTAGACTCTGGGCACCTCTGAGTCCAGATACAAAGGCACTCCCCGTCCTCT-CCCTTGCTTTGGCCACACTGGCATGATTTTAGCTTCTTGACAACACTGCAGTGCTTCTCTCCCTATAGGCTGTGCCCTCTCTCAGGAACGTGCAATATCCTTCAgagtcttacaattgaagggacaaaaaccaaatgaatcctgtttaaacaaaagaaataaaaagggaagattattttgttcattcacctgaaaaatccaggtgtgcatagcttcaggcatggctggatccggggattcaaagaatatttcagactgtggtcttcctgtctcttcggggttggcatctttcacagtcacgctctccctgcaggtgagaaatggctacactggtagtgtcaggcttacatcactctggctacatgcccctcctctgcggtagttaacagcaaagtctctgggatgtttctcattggctgagatg-gggtcatctgcccactcctgaaagaatcacatagccaatgggtgaagtttag-tgaagggccaggcctggatggcaggagccagaggatagg-cagccctatctgctgaactaagtggacatggagtTGTTTTCACAGGAAAAATCGAGAGTGGTCCCTGCAGAAGGGGAGAAGTGGTTCAGGAACAAGCAAACGATTAAACAGAAGCCCACTACACATTCACCTGGactcatcctgcaggtctcagcaaaagtgccacttcttcAGAGTGATCTCAGTCAAGGCCCACCAGTCCCTTTCCTCTGCTTTTTAGCTCCCATTTTTCTCacagctaaaatgtactgaatgctaaatatgtacagacatcgtcctaagagctttacatacattaataactgtaatta s panTro4.chr1 30445315 1524 + 228333871 tgagaaaaataatggtagctacttcataggattgtggtgaggacaaattcaaattaaagaaagtaaagagcttaacatagtggctggcacatggtaagtactaaaaagttagctattattATGGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTGCATGAGATGGAAAAGATTAAGAAGAACTCCTTCACCCCAGATGCCACAAAAATTTGTTATATAACCTCATGTGAACTATAGGAATTACCCAGACCCCATTCCCATTCTGTAAAATGATGCGATTTGTTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGTGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaataataaaataaaacaaaaatgatataataaaataaaaATGAAATTTAAAAAGATTTTACACTAAATGGCCTTTATGGCCCCAATAAGCCCTATCTGTTCCCGGTCTTGGATGCAGGACTCGGGGATGGATAGA-GTCAAGATGGGGGTTTGGTAAGAAGTGAGGACTTTGGGG-CAGCCTGGAAGAGGACTCAAAAAGAGCACATTGAGCATGTCAAGGCTTTTAGTTCTTACATTATCTCCCCCACTCCCACTCTCACTTGCCCAACTTATTGTGCTTAGACTCTGGGCACCTCTGAGTCCAGATACAAAGGcactccccgtcctgt-cccttgctttggccacactggcatgattttagcttcttaacaacactgcagtgcttctctccctataggctgtgccctctgtcaggaacgTGCAATATCCTTCAgagtcttacaattgaagggacaaaaaccaaatgaatcctgtttaaacaaaagaaataaaaagggaagattattttgttcattcacctgaaaaatccaggtgtgcatagcttcaggcatggctggatccggggattcaaagaatatttcagactgtggtctttctgtctcttcggggttggcatttttcacagtcacgctctccctgcaggtgagaaatggctacactggtagtgtcaggcttacatcactctggctacatgcccctcctctgcggtagttaacagcaaagtctctgggatgtttctcattggctgagatg-gggtcatctgcccactcctgaaagaatcacatagccaatgggtgaagtttaa-tgaagggccaggcctggatggcaggagccagaggatagg-cagccctatctgctgaactaagtggacatggagtTGTTTTCACAGGAAAAATCGAGAGTGGTCCCTGCAGAAGAGGAGAAGTGGTTCAGGAACAAGTAAACGATTAAACAGAAGCCCACTACACATTCACCTGGactcatcctgcaggtctcagcaaaagtgccacttcttcAGAGTGATCTCAGTCAAGGCCCACCAGTACCTTTCCTCTGCTTTTTAGCTCCCATTTTTCTCacagctaaaatgtactgaatgctaaatatgtacagacattgtcctaagagctttacatacattaataactgtaatta i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30033440 1522 - 229942017 tgagaaaaataatggtagctacttcataggattgtggtgacgacaaattcaaattaaagaaagtaaagagcttaacatagtggctggcacatggtaagtactaaaaa-ttagctattattATGGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTGCATAAGATGGAAAGGATTAAGAAGACCTCCTTCACCCCAGATGCCGGAAAAATTTGTTATATAACCTCATGTGAACTATATGAACTACCCGGACCCCATTCCCATTCTGTAAAATGATGCGATTCGCTTTTTCCACGTTATTAGATTTTATATTTTTACCAAGAGAAAGTGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaataataaaataaaacagaaatgataaaataaaataaaaATGAAATTTAAAAAGATTTTACACTAAATGGCCTTTATGGCCCCAATAAGCCCTATCTGTTCCAGGTCTTGGATGCAGGACTCGGGGGTGGATAGA-GTCGAGATGGGGGTTTGGTAAGAAGTGAAGACTTTGGGG-CAGCCTGGAAGAGGACTCAAAAAGAACACACTGAGCATGTCAAGGCTTTTAGTTCTTACATTATTTCCCCCACTCCTACTCTCACTTGACCAACTTACTGTGCTTAGACTCTGGGCACCTCTGAGTCCAGATACACAGGCACTCCCCGTCCTCT-CCCTTGCTTTGGCCACACTGGCATGGTTTTAGCTTCTTGACAACACTGCAGGGCTTCTCTCCCTATAGGCTGTGCCCTCTCTCAGGAACGTGCAATATCCTTCAgagtcttacaattgaagggacaaaaaccaaatgaatcttgtttaaacaaaagaaataaaaagggaagattattttgttcattcacctgaaaaatccaggcatgcatagcttcaggcatggctggatccagggattcaaagaatacttctgactgcggtcttcccgtctcctcagggttggcattattcacagccacgctctccctgcaggtgagaaatggctacactggtagtgtcaggcttacatcactctggctacacgcccctcctccgtgatagtt-acagcaaagtctctgggacgtttctcattggccgagatg-gggtcatctgcccactcctgaaagaatcacatagccaatgggtgaagtttaa-tgaagggccaggcctggatggcagaagccagaggataggccagccctatctgctgaactaagtggacatggagttgttttcacagg-aaaatcgaaagtgctcccagcagaagaggagaagtggttcaggaacaagtaaacgattaaacagaagcccactacaCATTCACCTGGACTCATCCTGCAGATCTCAGTGTAAGTGCCACTTCTTCAGCGTGATCTCAGTCAAGTCCCACCAGTCCCTTTCCTCTGCTTTTTAGTTCTCATTTTTCTCacagctaaaatgtactgaatgctaaatatgtacagacatcgtcctaagagctttacatacattaataactgtaatta i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33330572 1510 + 229590362 tgagaaaagtaatggtagctacttcataggattgcagtgaggacaaattcaaactaaagaaagcaaagagcttaacatagtggctggcacatggtaagtactaaaaagttagctattattATCGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTACATAAGATGGAGAGGATTAAGAAGACTTCCTTCATCCAAGATGCCTGAAAAATTTGTTATATAACCTCATGTGAACTATATGAACTACCCAGACCCCATTCCCATTCTGTAAAATGATGCGATTTGCTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGCGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaat-----aataaaacaaa------atgacataataaaaacgaaatTTAAAAAGATTTTACACTGAATGATCTTTATGGCCCCAACAAGCCCTGTCTGTTCCAGGTTTTGGATGCAGGACTCAGGGGTGGGTAGA-GTCAGGATGGGGGTTTGGTAAGAAGTGAGGACTTTGGAGCCAGCCTGGAAGAGGACTCAAAAAGAACACATTGAGCATGTCAAGGCTTTTAGTTCTTACATTATCTCTCCCAGTCCCACTCTCTC--GCCCAACTTATTGTGCTTAGACTCTGGGCACCTTTGAGCCCAGACACACAGGcactccccattctctccccttgctttggccacactggcatggttttagcttcttgacaacactgcagtgcttctctccctacaggctgtgccctctgtcaggaacgTGCAGTATCCTTCAgagtcttacaattgaagggacaataaccaaatgaatcctgtttaaacaaaagaaataaaaagggaagactattttgttcattcacctgaaaaatccaggcgtgcatagcttcaggcatggctggatccagggattcaaagaacatttcagactgtggtcttcccatctcctcggggctggcattattcacagccgcgctctccctgcaggtgagaaatgactacactggtggtatcaggcttgcatcacactggctacacgcctctcctcccggatagtt-atagc-aagtttctggaatgattctcattggccaagatg-gggccatctgcccactcctgaaagaatcacgtagccagtgggtgaagtttaactgaagggtcagtcctggatggcaggagccagaggacgggtcagccccatctgctgaactaagtgaacatggagttggtttcacagg-aaaatcggaagtggtccccatagaagaagagaagtggttcaggaacaagtaaacgattaaacagaagcccactacTCAttcacctggactcatcctgcaggtctcagtgtaagtgccacttcttcAGTGTGATCTCAGTTAGGGCCCACCAGTCTCTTTCCTCTGCTTTTTAACTC--ATTTTTCTCacagctgaaatgtactgaatactaaatatgtaaagacattgtcctaaaagctttacatacattagtaactgtaatta i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29841709 1516 - 227556264 tgagaaaagtaatggtagctacttcataggattgcagtgaggacaaattcaaactaaagaaagcaaagagcttaacatagtggctggcacatggtaagtactaaaaagttagctattattATCGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTACATAAGATGGAGAGGATTAAGAAGACTTCCTTCACCCCAGATGCCTGAAAAATTTGTTATATAACCTCATGTGAACTATATGAACTACCCAGACCCCATTCCCATTCTGTAAAATGATGCGATTTGCTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGCGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaataataaaataaaacaaa------atgacataataaaaacaaaatTTAAAAAGATTTTACACTGAATGATCTTTATGGCCCCAACAAGCCCTGTCTGTTCCAGGTTTTGGATGCAGGACTCAGGGGTGGGTAGA-GTCAGGATGGGGGTTTGGTAAGAAGTGAGGACTTTGGAGCCAGCCTGGAAGAGGACTCAAAAAGAACACATTGAGCATGTCAAGGCTTTTAGTTCTTACATTATCTCTCCCAGTCCCACTCTCTC--GCCCAACTTATTGTGCTTAGACTCTGGGCACCTTTGAGCCCAGACACACAGGCACTCCCCATTCTCTCCCCTTGCTTTGGCCACACTGGCATGGTTTTAGCTTCTTGACAACACTGCAGTGCTTCTCTCCCTACAGGCTGTGCCCTCTGTCAGGAACGTGCAGTATCCTTCAgagtcttacaattgaagggacaataaccaaatgaatcctgtttaaacaaaagaaataaaaagggaagactattttgttcattcacctgaaaaatccaggcgtgcatagcttcaggcatggctggatccagggattcaaagaacatttcagactgtggtcttcccgtctcctcggggctggcattattcacagccgcgctctccctgcaggtgagaaatgactacactggtggtatcaggcttgcatcacactggctacatgcctctcctcccggatagtt-atagcaaagtttctggaatgattctcattggccaagatg-gggccatctgcccactcctgaaagaatcacgtagccagtgggtgaagtttaactgaagggtcagtcctggatggcaggagccagaggacgggtcagccccatctgctgaactaagtgaacatggagttggtttcacagg-aaaatcggaagtggtccccatagaagaagagaagtggttcaggaacaagtaaacgattaaacagaagcccactacTCATTCACCTGGactcatcctgcaggtctcagtgtaagtgccacttcttcAGTGTGATCTCAGTTAGGGCCCACCAGTCTCTTTCCTCTGCTTTTTAACTC--ATTTTTCTCacagctgaaatgtactgaatactaaatatgtaaagacattgtcctaaaagctttacatacattagtaactgtaatta i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32608119 1520 + 220367699 TGAGAAAAGTAATGGTAGCTACTTCATAGGATTGCAGTGAGGACAAATTCAAACCAAAGAAAGCAAAGAGCTTAACATAGTggctggcacatggtaagtactAAAAAGTTAGCTATTATTATGGTGGTCAGTATTATTATCTCCCAAGAGCTATTTTACATAAGATGGAGAGGATTAAGAAGACTTCCTTCACCCTAGATGCCTGAAAAATTTGTTATATAACCTCATGTGAACTATATGAACTACCCAGATCCCATTCTCATTCTGTAAAATGATGCGATTTGCTTTTTCCACATTAttagattttatctttttaccAAGAGAAAGCGTCCATgtattatttgataaaataaataaaacaataaaagaaaataataaaataaaacaaa------atgacataataaaaatgaaatttaaaaagattttacaCTGAATGGCCTTTATGGCCCCAACAAGCCCTATCTGTTCCAGGTTTTGGATGCAGGACTCAGGGGTGGATAGA-GTCGGGATGGGGGTTTGGTAATAAGTGAGgactttgaggccagcctggaagAGGACTCAAAAAGAACACATTGAGCATGTCAAGGCTTTTAGTTCTTACATTATCTCTCCCAGTCCCACTCTCTCTTGCCCAACTTATTGTGCTTAGACTCTGGGCACCTCTGAGCCCAGATACACAGGCACTCCCCATCCTCTCCCCTTGCTTTGGCCACACTGGCATGGTTTTAGCTTCTTGACAACACTGCAGTGCTTCTCTCCCTACAGGCTGTGCCCTCTGTCAGGAACGTGCAGTATCCTTCAGAGTCTTACAATTGAAGGGACAATAACCAAATGAATCctgtttaaacaaaagaaataaaaagggaagaCTATTTTGTTCATTCACCTGAAAAATCCAGGCGTGCAtagcttcaggcatggctggatccagggaTTCAAAGAACATTTCAGACTGTGGTCTTCCCGTCTCCTCGGGGCTGGCATTATTCACAGCCGTGCTCTCCCTGCAGGTGAGAAATGACTACACTGGTGGTATCAGGCTTGCATCACACTGGCTACACGCCTCTCCTCCCGGATAGTT-ATAGCAAAGTTTCTGGAATGATTCTCATTGGCCAAGATG-GGGCCATCTGCCCACTCCTGAAAGAATCACGTAGCCAGTGGGTGAAGTTTAACTGAAGGGTCAGTCCTGGATGGCAGGAGCCAGAGGACGGGTCAGCCCCATCTGCTGAACTAAGTGAACATGGAGTTGGTTTCACAGG-AAAATCGGAAGTGGTCCCCGTAGAAGAGGAGAATTGGTTCAGGAACAAGTAAACGATTAAACAGAAGCCCACTACTCATTCACCTGGACTCATCCTGCAGGTCTCAGCGTAAGTGCCACTTCTTCAGTGTGATCTCAGTTAGGGCCCACCAgtctctttcctctgctttttaactcttatttttcTCACAGCTGAAATGTACTGAATGCTAAATATGTACAGACATTGTCCTAAGAGCTTTACATACATTAGtaactgtaatta i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28123348 1510 - 130588469 tgagaa----aatggtagctacttcataggattgcagtgaggacaaattcaaactaaagaaagcaaagagcttaacatagtggctggcacatggtaagtactaaaaagttagctattatt---GTGGTCAGTATTATTATCTCCCAAGAACTATTTTACATCAGATGGAGAGGATTAAGAAGACTTCCTTCACCTCAGATGCCTGAAACATTTGTTATATAACCTCATGTGAACTATATGAACTACCCAGACCCCATTCCCATTCTGTAAAATGATGCGATTTGCTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGCGTCCATGTATTATTTGataaaataaataaaacaataaaagaaaataataaaataaagcaaa------ataacataataaaaatgaaatTTAAAAAGATTTTACACTGAATGGCCTTTATGGCCCCAACAAGCCCTATCTGTTCCAGGTTTTGTATGCAGTACTCAGGGGTGGATAGA-GTCGGGATGGGGGTTTGGTAAGAAGTGAGGACTTTGGAACCAGCCTGGAAGAGGACTCAAAAAGAACATGTTGAGCATATCAAGGCTTTTAGTTCTTACATTATCTCCCTCAGTCCCACTCTCTCTTGCCCAACTTATTGTGCTTAGACTCTGGGCACCTCTGAGCCCAGATACACAGGCACTCCCCATCCTCTCCCCTTGCTTTGGCTACATTGGCATGGTTTTAGCTTCTTGACAACACTGCAATGCTTCTCTCCCTACAGGCTGTGCCCTCTGTCAGGAACGTGCAGTATCCTTCAgagtcttacaattgaagggacaataaccaaatgaatcctgtttaaacaaaagaaataaaaagggaagactattttgttcattcacctgaaaaatccaggcatgcatagcttcaggcatggctggatccagggattcaaagaacatttcagactgtggtcttccggcctcctcggggctggcattattcacagctgcgctctctctgcaggtgagaaatggctacactggtggcatcaggcttgcatcacactggctgcatgcgtctcctccctgatagtt-atagcaaagtttctggaatgattctcattggccaagatg-gggccatctgcccactcctgaaagaatcacgtagccaatgggtgaagtttaactgatgggtcagtcctggatggcaggagccagaggacaggtcagccccatctgctgaactaagtaaacatagagttggtttcacagg-aaaatcggaagtggtccccatagaa---gagaaatggttcaggaacaagtaaacgattaaacagaagcccactacTCATTCACCTGGactcatcctgcaggtctcagcgtaagtgccacttcttcAGTGTGATCTCAGTTAGGGCCCACCAGTCTCTTTCCTCTGCTTTTTAACTCTTATTTTTCTCacagctgaaatgtactgaatgctaaatatgtatagacattgtcctaagagctttacatacattagtaactgtaatta i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64579008 1434 + 155834243 tgagaaaaataatagtagctacttcacaggattgtggtgaggacaaattcaaattaaagaaagcaaagagctta--agagtggctggcacatggtgagtactaaaaagttagctattattATTGTGGTCAGTATTATTACCTCCCTAGAGC----------------------------------------------------------------TATATGACCTCAGGTAATCTATATGAACTACCCTCACCCCATTCCCGTTCTGTAAAATGATGCAATTTGCTTTTTCCACATTATTAGATTTTATCTTTTTACCAAGAGAAAGTATCTATATATCACTTGataaaataaataaa-----------------taaaataaaacaaa--tgacataataaaataaacataaaatTTTAAAAGATATTACAC-AAGTGGCCTTTATGGCTCCAGTAAGTCCTATCTGTTCCAGGTCTTGGATGCAGGACTCGGGGGTGAGTAGAGGTGGGGATGGGGGTTTGGTAAGAAGTGAGGA-TTTGGGG-CAGCCTGGGAGAGGACTCAAAAAGAATGAATTGAGTATGTCAAGGCTGTTAGTTCTTACATTATCTCCCCCACTCCCACTCTCAA-TGCCCAACTTATTGTGCTTAGCCTCCAGGCACTTCTGAGCCCAGATACACTGGTGCTCCCCATCCTCTCCCCTTGCTTTGGCCACACTGGAATGGTTTTATCTTCTTGACAAGACTGCAGTGCTTCTCTCACTATAGGCTGTGTCCTCACCCAGGAATGTGCAATATCCTTCAgagtcttacagttgaaaggacaaaaaccaaatgaatccggtttaaacaaaagaaattaaaagggaagattattttgttcattcacctgaaagatccaggtgtgcacagcttcaggcatgcctggatccagggattc--agagtatttcagactgtggtcttcccatctcctcagggttggcatcattcatagccacgctttccctgcagataagaaatggccacactggtgatgtcaggcttacatcacactggctacgtactcctcttccctgatagtt-atagcaaagtctctggaatgattctcattggcccagatgagggtcatctgcccactcctgaaagaattatgtaaccagtgggtgaagtttcactgaaggtccaggcctggatggcaggagccagaggatgggtcagccccatttgatgaactaagtgaacttggagttgttttcacagg-gaaatcagg-gtggaccctgcagaagaacagaagtgggtcaggaacaagtaaacaattaaacagaagcccactacaCATTCACCTAGactcatcctgcaggtctcagcat-agtgttacctcttcAGAGTGA-CTCAGTCGGGGCCCACCAGTCCCTTTCCTCCACTTTTTAGTTCTCAGTTTTCTtacacctaaaatgtactgattgctaagtatatatagacattgtcctaagagctttacatacattagtaagtgtcatta i calJac3.chr7 C 0 C 0 e mm10.chr4 25392870 647 - 156508116 I e nomLeu3.chr24 447476 4 - 28733288 I e canFam3.chr2 14969639 1703 - 85426708 I a score=1087605.000000 s hg38.chr1_KI270760v1_alt 15345 479 + 109528 tttcaatatccctctaagggatgaggaaactgaggtgcagagaggttgagtattgagtaacttgcccaagggcgcacagccaggaagtggcagagttggtattccagcccaggtggtcacccttcagcccacactttcc-cgaaaccactaGATTTCTCTTTCTAAA----TATCACATGGGTAATCATGAATTTGCATATACACACGCACAAACAC--ACGCGCTCACATAAA--------------CACACATTCACACACATCTATTCTCACATAAACACTCTCAAAATACA--TACGCATGCATTTACACACAAATATATTTTGCACGCATACACAAACACAAATATGCATACACTCACCAAAAACATTTTCACACACACATACTCATACATGCATTTGCTCACAGATACACACT------ACACACACACTCACATAGATACCTTCACATACTC----CCATTTATACACACAATCACAAACATGCACTCATATAAACACTCCCATG s panTro4.chr1 30446839 483 + 228333871 tttcaatatccctctaagggatgaggaaactgaggtgcagagaggttgagtatcgagtaacttgcccgagggcgcacagccaggaagtggcagagttggtattccagcccaggtggtcactcttcagcccacactttcc-tgaaaccactaGATTTCTCTTTCTAAA----TATCACATGGGTAATCATGAATTTGcatatacacacgcacaaacac--acgcgctcacataaa--------------cacacattcacacacaTCTATTCTCACATAAACACTCTCAAAACACA--TATGCATGCATTTACACACAAATATATTTTGcatgcatacacaaacacaaatatgcatacactcaccaaaaacattttcacacacacatactcatacatgcatttgctcacagatacacact------acacacacactcacatagataccttcacatactcactcccatttatacacacaatcataaacatgcactcatataaacacTCCCATG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30034962 485 - 229942017 ttttaatatccctctaagggatgaggaaactggggtgcagagaggttgagtattgagtaacttgcccaagggcgcacagccaggaagtggcagagttggtattccagcccagctggtcacctttcagcccacactttcc-caaaaccactaGATTTCTCTTTCTAAA----TATCACATAGGTAATCATGAATTTGcatatacatatgcaaaagcacaaacacgctcacataaa--------------cacacattcacacacatctattctcacataaacactctcaaaacaca--tacacatgcatttacacacaaatatattttgcatgcacacacaaacacaaatgtgcatacactcacCAAAAACATTTTcacacacacatactcatacaagcatttgctcacagatacacact------acacacacactcacatagataccttcacatactcactcccatttatacacacaatcacaaacatgcactcatataaacactcccatg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33332082 492 + 229590362 ttttaatatccctctaaggggtgagaaaactgaggtgcagaggggttgagtattgagtaacttgcccaagcacacatagccaggaagtggcagagttggtattccagcccgggtggtcacctttcagcccacactttcc-ccaAACCACTGGATTCCTCTTTCTAAA----TATCACACGGGTAATCATGACTTTGcatatacacatgcacagacac--acaagctcacataaa-----acacacattcacacattcacacacatctattct--c----acattctgaaaacaca--gacacatgtatttatgcacaaatatatttcgcatgcacacacaaacacaaataagcatacactcaccaaaaacattttcacacacacgtactcatacaTGCATTTGCTAACAGATACATACTacacacacacacacactcacatagataccttcacataaccactcccatttatacacacaatcacaaacatgcactcatataaacactcccatg i rheMac3.chr1 C 0 I 3 s macFas5.chr1 29843225 490 - 227556264 ttttaatatccctctaaggggtgagaaaactgaggtgcagaggggttgagtattgagtaacttgcccaagcacacatagccaggaagtggcagagttggtattccagcccgggtggtcacctttcagcccacactttcc-ccaaaccactGGATTTCTCTTTCTAAA----TATCACACGGGTAATCATGACTTTGCATATACACATGCACAGACAC--ACAAGCTCACATAAA-----ACACACATTCACACATTCACACACATCTATTCT--C----ACATTCTGAAAACACA--GACACATGTATTTATGCACAAATATATTTCGCATGCACACACAAACACAAATAAGCATACACTCACCAAAAACATTTTCACACACACGTACTCATACATGCATTTGCTAACAGATACATACT--ACACACACACACACTCACATAGATACCTTCACATAACCACTCCCATTTATACACACAATCACAAACATGCACTCATATAAACACTCCCATG i macFas5.chr1 C 0 I 3 s papAnu2.chr1 32609639 484 + 220367699 ttttaatatcccTCTAAggggtgagaaaactgaggtgcagagggGTTGAGTagtgagtaacttgcccaagcacgcacagccaggaagtggcagagttGGTATTCCAGCCCAGGTGGTCACCTTTCAGCCCACACTTTCC-CCAAACCACTGGATTTCTCTTTCTAAA----TATCACACGGGTAATCATGACTttgcatatacacatgcacaaacac--acaagctcacataaa-----a--------cacacattcacacacatctattctcac----acattctgaaaacaca--tacacTTGTATTTATGCACAAATATATTtcgcatgcacacacaaacacaaataagCATACACTGGCCAAAAACATTTTCACACACAGGTACTCATACATGCATTTGCTAACGGAtacatact--acacacacacacactcacatagagaccttcacataaccactcccatttatacacacaatcacaaacaTGCATTCATATAAacactcccatg i papAnu2.chr1 C 0 I 3 s chlSab2.chr20 28124858 490 - 130588469 ttttaatatccctctaaaggatgagaaaactgaggtgcagagaggttgagtattgagtaacttgcccaagggcacatagccaggaggtggcagagttggtattccagcccgggtcgtcacctttcaactcacactttcc-ccaaaccactGGATTTCTCTTTCTAAA----TATCACGCAGGTAATCATGAATTTGC--ATACACATGCACAAACAC--ACAAGCTCACATAAA-----ACACGCATTCACACATTGACACACATCTATTCTCAC----ACATTCTCAAAACACA--TACACATGTATTTATGCACAAATATATTTCGCATGCACACACAAACACAAATAAGCATACACTCGCCAAAAACATTTTCACACACACGTACTCATACATGCATTTGCTAACAGATACATACT--ACACACACACACACTCACATAGATACCTTCACATAACCACTCCCATTTATACACACAATCACAAACATGCACTCATATAAACACTCCCATG i chlSab2.chr20 C 0 I 3 s calJac3.chr7 64580442 493 + 155834243 ttttaatatccctctaaggaatgaggaaactgaagtgcagagaggttgggtattgagtaacttgcccaaggacgcacatccaggaagtggcagagttagtattctagcccaggtggccacctttcagcccacacttttc-ccaGACCATTAGATTTCTCTTTCTAAA----AATCACATGGGTAATCATGAATTTGcatatacacatgcacaaacac--acacacacacatcaacacccatacccattcacacattcacacacatctattctcac----acattctcaaaacacactcacacatgcatttacacacaaatatattttgcacacacacacaaacacaaatatgcat-cactca-caaaaacattttcacacacacatattcatacatgcatttgctcacacatacaccct------acacagacactcacatagatacccttacacacccacCACCATTTTTACACACAATCACAAACATGCACTCATATAAACACTCCCATG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14971342 280 - 85426708 ttttaatctcaactttacagatgaggaaagtgaggtcccgtgaggttgagt-------------cccaggggcacacagccaggatgcagcaaagctggcattcccacccag--ggctacttctcagtccaaacttttctccaaaccacta---ttctccttcTGAAACATAGTCCCGTGGGTAATTGTGACTTCAC------------ACACATAC--ACACACTTACCTAAA--------------CACAA----------------TCTAAC----ACATGCT-----------TACTGGTGCCTTGAGA---------------CATGCATACACACATGCAAATG---------------------------------CTGTCCCGTGTATGCATACGCT----------------------------------------------------------------------------------------------------------- i canFam3.chr2 I 1703 C 0 e mm10.chr4 25392870 647 - 156508116 I e nomLeu3.chr24 447476 4 - 28733288 I a score=378584.000000 s hg38.chr1_KI270760v1_alt 15824 164 + 109528 TCACACACTCATACCTGCATACATACACACAGTCACACTGTCATGCACT----TTTGCACATACACGTG----CACTCACACATGTACACTC---AAATACATATTTTCTTACACTCACA-AAACATTCACGTGCACTCATAAATGTATTCACTCGCACATCTG-CACACATATGCA s panTro4.chr1 30447322 163 + 228333871 TCACACACTCATACCTGCATGCATACACACAGTCTCACTGTCATGCA-T----TTTGCACATACATGTG----CATTCACACATGTACACTC---AAATACATATTGTCTTACACTCACA-AAACATTCACGTGCACTCATAAATGTATTCACTCGCACTTCTG-cacacatatgca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30035447 162 - 229942017 tcacacactcatacctgcatgcatacacacagtcacacTGTCATGCACT----TTTGCACATACACGTG----CACTCACACATGTACACTC---AAATACATATTTTCTTACACTCACA-AAACATTCATGTGCACTCATAAATGTATTCACTCCCACATCTT---cacatatgca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33332577 161 + 229590362 tcacacattcatacatgcatgcatacacacggtcacactgtcacacact----tttgcacatacacgtg----cactcacacatgtacactc---aAATACATATTTTCTTACACTCACA-AAACAGTCACATGCAC---TAAATGTATTCACTcacacatctg-cacacatgtgca i rheMac3.chr1 I 3 C 0 s macFas5.chr1 29843718 161 - 227556264 TCACACATTCATACATGCATGCATACACACGGTCACACTGTCACACACT----TTTGCACATACACGTG----CACTCACACATGTACACTC---AAATACATATTTTCTTACACTCACA-AAACAGTCACATGCAC---TAAATGTATTCACTCACACATCTG-CACACATGTGCA i macFas5.chr1 I 3 C 0 s papAnu2.chr1 32610126 161 + 220367699 tcacacattcatacatgcatgcatacacacggtcacactgtcacacact----tttgcacatacacgtg----cactcacacatgtacactc---aaatacacattttcttacactCACA-AAACATTCACATGCAC---TAAATGTATTCACTCACACATCTG-CACACATGTGCA i papAnu2.chr1 I 3 C 0 s chlSab2.chr20 28125351 161 - 130588469 TCACACACTCATACATGCATGCATACACACGGTCACACTGACACACACT----TTTGCACATACACGTG----CACTCACACATGTACACTC---AAATACATATTTTCTTACACTCACA-AAACAGTCACATGCAC---TAAATGTATTCACTCACACATATG-CACACATGTGCA i chlSab2.chr20 I 3 C 0 s calJac3.chr7 64580935 167 + 155834243 TCACACACTTGTACCCCCATGCATACACATATGCTCACTGTCACACA-C----TTTGCACATATACGTGTGTTcactcacacacatacactc---aggtacatatttccttatactcaca-aaacattcacatgcactcacaaatttattcaatcacacctcta-gacacatgtgca i calJac3.chr7 C 0 C 0 s mm10.chr4 25393517 153 - 156508116 TCACATGCATATACTT---TACACACTCACAGGCACTCTTACATGAGCTTATGTTTTCACTTACATTTG----CACTCAGACACCCTCCCCCCAAAAAACCATATTTGCCTGTGCTCACA-AAACATTCATGTGAGT----------------TCACATCTCTATCCCACGCCTACA i mm10.chr4 I 647 C 0 s canFam3.chr2 14971622 118 - 85426708 -------------------------------GTCACAA----------T----GCTGCATGTGGCCGTG----CACTCACACATACACACGT---------ACATGTGCATGAACTCAGAGAAACACACACGATCATCCACATTCACTTTCGCTCACACACCTG-CACATGCATGCA i canFam3.chr2 C 0 I 586 e nomLeu3.chr24 447476 4 - 28733288 I a score=770461.000000 s hg38.chr1_KI270760v1_alt 15988 361 + 109528 CTCAAATAGACATTCATATGCACATTCAAAAACATACATGCATTCACACACACATACACATCCATTTGCATGCACTCACGCAAATATTCTCAAAAACATACACATTCATGCACATTTTCACTCATACACACACATACATATGCACTCATAT-AA-ACATTCTGACATTCTCATCTGCTCGAATTCACACACTCTCACATGCACACACACAtgagcccaggagttcaagcctgc-aatgagctgtgattgctccactgcactccaCACACATGCACAGACACACATATATG--AAGTCACATTTGTGCACACACTC-AAACACTCACGCACACA----AATTTGAgtggttaattgttcaatgcctgcctct s panTro4.chr1 30447485 359 + 228333871 ctcaaatagacattcatatgcacattcaaaaacatacgtgcattcacacaca--tacacatccatttgcatgcactcacacaaatattcttaaaaacatacacattcatgcacattttcactcatacacacacatacatatgcactcatat-aa-acaTTCTGACATTCTCATCTGCTCGAATTCACACACTCTCACATGCACACACACAtgagcccaggagttcaaggctgc-aatgagctgtgattgctccactgcactccacacacatgcacagacacacatatatg--aagtcacatttgtgcacacactc-aaacactcacgcacaca----AATTTGAgtggttaattgttcaatgcctgcctct i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30035609 361 - 229942017 ctcaaatagacattcatatgcacattcaaaaacatacatgcattcacacaca--cacacatccatttgcatgcactcacacaaatattctcaaaaacatacacattcatgcacattttcactcatacacacacatacctatgcactcatat-aa-acaTTCTGACATTCTCATCTGCTTGAATTCACACACTCTCACATGCACACACACAtgagcccaggagttcaaggctgc-aatgagctctgattgctccactgcactccacacacatgcacagacacacatatatgcaaagtcacataagtgcacacactc-aaacactcacgcacaca----AATTTGAgtggttaattgttcaatgcctgcctct i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33332738 363 + 229590362 ctcaaatagacattcatatgtacattcaaaaacatacatgcattcacacacacatacacatccatttgcatgcactcacacaaatgttctcaaaaacacgcacattcatgcacattttcactcatacacacacacatacatacactcatat-aa-acactctgacattctcatccgcacaaattcacaaactctcacatgcacacacacatgagcccaggagttcaagactgc-aatgagctgtgattgctccactgcactccaCACACATGCACAGACACACATATATGCAAAGTCACAAATGTGCACACACTC-Gaacactcatgcacaca----aatttgagtgattaattgctcaatgcctgcctct i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29843879 363 - 227556264 CTCAAATAGACATTCATATGTACATTCAAAAACATACATGCATTCACACACACATACACATCCATTTGCATGCACTCACACAAATATTCTCAAAAACACGCACATTCATGCACATTTTCACTCATACACACACACATACATACACTCATAT-AA-ACACTCTGACATTCTCATCCGCACAAATTCACAAACTCTCACATGCACACACACAtgagcccaggagttcaagactgc-aatgagctgtgattgctccactgcactccaCACACATGCACAGACACACATATATGCAAAGTCACAAATGTGCACACACTC-Gaacactcatgcacaca----aatttgagtgattaattgctcaatgcctgcctct i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32610287 353 + 220367699 CTCAAATAGGCATTCATATGTacattcaaaaacatacatgcattcacacacacatacacatccatttgcatgcactcacacaaatattctcaaaagcacgcacattcatgcacattttcactcacacacatacacatacatacactcataT-AA-ACCCTCTGACATTCTCATCTGCACAAATTCACAAactctcacatgcacacacacatgagcccaggagttcaaga-----------ctgtgattgctccactgcacgccacacacatgcacagacacacatatatgcaaagtcacaaatgtgcacacactc-gaacacTCATGCACACA----AATTTGAGTGATTAATTGCTCAATGCCTGCCTCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28125512 358 - 130588469 CTCAAATAGACAGTCATATGTACATTCAAAAACATACATGCATTCACAC------ACACATCCATTTGCATGCACTCACACAAATATTCTCAAAAACACACACATTCATGCACATTTTCACTCATACACACACGCATACATACACTCATGTAAA-ACACTCTGACATTCTCATCTGCACAAATTCACAGACTCTCACAGGCACACACACAtgagcccaggagttcaagactgc-aatgagccgtgattgctccactgcactccaCACACATGCACAGACACACATATATGCAAAGTCACATATGTGCACACACTC-Gaacactcatgcacaca----aatttgagtgattaattgctcaatgcctgcctct i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64581102 322 + 155834243 ctcaaatagacattcacatgcacattcacactcatacatgcattcacacaca--tatacctgcacatgcatg-actcatacaaatattctcaaaaac-tacacatttatgcacagt--------------------cacatg---tcatat-aa-acactctgacattctaagacacacaaattcgtacattctaacatg--cacacatatgagcccaggagttcaaggctgctaataagctgtgattgctccactgcactcc--------------aCACACATATATGCAAAGTCACAAATGTGCACACACACAAaacactcatgcacaca----aatttgagtgattaagtgctcaatgcctgcctgt i calJac3.chr7 C 0 C 0 s mm10.chr4 25393670 259 - 156508116 CTCAAA----CACTCATGTATGTATTCATAAGCACATGTG--------------TGCA----GATGGGCATGGGCGAACATGGGTGTTCTCATAGAT-----CCTGAGTCCACATA--CAATCACTCACACACCTATGCTCTCACTCTTGC-ACTAAATCCTGAC--TCACACTTATATGA--CCACACACTCTCACATGAGCACA-----------------TCAGACCCAC-AA-------------------------------------------GTACATGGGTACAAAGACACA----------------TGGCACTCACAAACACAGCTGACCTTGAGCAATCACTCACTCAGTACC-ACCTCT i mm10.chr4 C 0 I 158 e nomLeu3.chr24 447476 4 - 28733288 I e canFam3.chr2 14971740 586 - 85426708 I a score=410721.000000 s hg38.chr1_KI270760v1_alt 16349 172 + 109528 gcactctgc-ataaaccccttgaagacaggaccctatctctctcattcgtcgtgtccccagaacctgtcacagtg--cagagtaggagttggtgcccTCATTTTTCCAATGGGAATAACGAGTCCAGCTCAACCAGCTCTCTCTATAAGGGGGATTTGGAGAGCTTACAAAAAGA s panTro4.chr1 30447844 172 + 228333871 gcactctgc-ataaaccccttgaagacaggaccctgtctctctcattcgtcgtgtccccagaacctgtcacaGTG--CAGAGTAGGACTTGGTGCCCTCATTTTTCCAATGGGAATAACGAGTCCAGCTCAACCAGCTCTCTCTATAAGGGGGATTTGGAGAGCTTACAAAAAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30035970 172 - 229942017 gcactctgc-ataaaccccttggagacaggaccctgtctctctcattcattgtgtccccagaacctgtcacaGTG--CAGAGTAGGACTTGGTGCCCTCATTTTTCCAATGGGAATAACGAGTCCAGCTCAACCAGCTCTCTCTATAAGGGGGATTTGGAGAGCTTACAAAAAGA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33333101 172 + 229590362 gaactctgc-ataaactccttggagacaggaccctgtctgtctcattgattgtgtccccagaacctgtcacaGTG--CAGAGTAGGACTTGGTGCCCTCATTTTTCCAATGGGAATAATGAGTCCAGCTCAACCAGCTCTCCCTATAAGGGGGATTTGGAGAGCTTACAAAAGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29844242 172 - 227556264 gaactctgc-ataaactccttggagacaggaccctgtctgtctcattgattgtgtccccagaacctgtcacaGTG--CAGAGTAGGACTTGGTGCCCTCATTTTTCCAATGGGAATAATGAGTCCAGCTCAACCAGCTCTCCCTATAAGGGGGATTTGGAGAGCTTACAAAAGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32610640 172 + 220367699 GAACTCTGC-ATAAACTCCTTGGAGACAGGACCCTGTCTGTCTCATTGATTGTGTCCCCAGAACCTGTCACAGTG--CAGAGTAGGACTTGGTGCCCTCATTTTTCCAATGGGAATAATGAGTCCAGCTCAACCAGCTCTCCCTATAAGGGGGATTTGGAGAGCTTACAAAAAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28125870 172 - 130588469 gaactctgc-ataaactccttggagacaggaccctgtctgtctcattgattgtatccccagaacctgtcacagtg--cagagtaggacttggtgtcctcatttttccaatgggaataatgagTCCAGCTCAACCAGCTCTCCCTATAAGGGGGATTTGGAGAGCTTACAAAAAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64581424 175 + 155834243 acactctgctataaaccccttggagacaggaccctgtctttctcattcattgtgtccccagaacctgtcataGTGCACAGACCGGGACTTGGTGCCCTCTCTTTTCTAATGGGAATAATGAGTCCAGCTCAACCAGCTTTCCCTACAAGGGGGATTTGAAGAACTAACAAAAAGG i calJac3.chr7 C 0 C 0 e mm10.chr4 25393929 158 - 156508116 I e nomLeu3.chr24 447476 4 - 28733288 I e canFam3.chr2 14971740 586 - 85426708 I a score=1673064.000000 s hg38.chr1_KI270760v1_alt 16521 605 + 109528 CCCGTTTCT--------CCTCTT-CCCCTT----CTCCCTCTTC--------ACATCCCACTCTACCTTCCTAAGCTAATTAAATGATACCATGGAACATATTTCATTTACATTTGGCTC-AAAGGGCCAGGGAGTGCCAGTGTGTGCTCATTAGACAGCTCTGCGTAGA--GGGATGTAATGAGCCGGTTTTATTATAGTCGTCA-TCTCAGCCCATCCTGTGAGACGATCTTGTAGTCACTGGGGAGAAAGAGAACCACAAACCTGAGAGCCTGGGTTTCAGGGCTGAGGAGTGGGAGGAGGACCCAACTTGGGGAAAGCCTTAGGCT--------------GCCCTGGGCCCTGGGCTCTGGCT-GGGGCAGGAG---GGAGGAGGAGGTGAGCCTGGGCCCAGGTGGCCCCTG------TTACTGTCTCCCTAAATGTAAGTCTCAGAACTCCACACTGGCTTTGACTAGAGCCACAGCTGAGGGTCCCAACCTAGGGGCCCAGAACTCCTGGGGGTGCTAACCTCAGGGGTCCCCAGA-TTTAATT-----GTGTATCATATGCTGTTTGCAGCTGGAAGAATTGACCTGGTACATAGCAAAGCACCACTTTATGATCTGCATGTACTACAGAAA-----CAGAAACAACA----------CTGAGAAGC s panTro4.chr1 30448016 605 + 228333871 CCCGTTTCT--------CCTCTT-CCCCTT----CTCCCTCTTC--------ACATCCCACTCTACCTTCCTAAGCTAATTAAATGATACCATGGAACATATTTCATTTACATTTGGCTC-AAAGGGCCAGGGAGTGCCAGTGTGTGCTCATTAGACAGCTCTGCGTAGA--GGGATGTAATGAGCCGGTTTTATTATAGTCGTCA-TCTCAGCCCATCCTGTGAGACGATCTTGTAGTCATTGGGGAGAAAGAGAACCACAAACCTGAGAGCCTGGGTTTCAGGGCTGAGGAGTGGGAGGAGGACTCAACTTGGGGAAAGCCTTAGGCT--------------GCCCTGGGCCCTGGGCTCTGGCT-GGGGCAGGAG---GGAGGAGGAGGTGAGCCTGGGCCCAGGTGGCCCCTG------TTACTGTCTCCCTAAATGTAAGTCTCAGAACTCCACACTGGCTTTGACTAGAGCCACAGCTGCGGGTCCCAACCTAGGGGCCCAGAACTCCTGGGGGTGCTAACCTCAGGGGTCCCCAGA-TTTAATT-----GTGTATCATATGCTGTTTGCAGCTGGAAGAATTGACCTGGTACATAGCAAAGCACCACTTTATGATCTGCATGTACTACAGAAA-----CAGAAACAATA----------CTGAGAAGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30036142 604 - 229942017 CCCGTTTCT--------CCTCTT-CCTC-T----CTCCCTCTTC--------ACATCCCACTCTACCTTCCTAAGCTAATTAAATGACACCATGGAACATATTTCATTTACATTTGGCTC-AAAGGGCCAGGGAGTGCCAGTGTGTGCTCATTAGACAGCTCTGCGTAGA--GGGATGTAATGAGCTGGTTTTATTATAGTCATCA-TCTCAGCCCATCCTGGGAAACGATCTTGTAGTCATTGGGGAGAAAGAGAACCACAAACTTGAGAGCCTGGGTTTCAGGGCTGAGGAGTGGGAGGAGGACCCAACTTGGGGAAAGCCTTAGGCT--------------GCCCTGGGCCCTCGACTCTGGCT-GGGGCAGGAG---GGAGGAGGAGGTGAGCCTGGGCCCAGGTGGCCCTTG------TTACTGTCTCCCTAAATGTAAGTCTCAGAACTCCACACTGGCTTTGACTAGAGCCACAGCTGAGAGTCCCAACCTAGAGGCCCAGAACTCCTGGGGGTGCTAACCTCAGGGGTCCCCAGA-TTTAATT-----GTATATCATATGCTGTTTGCAGCTGGAAGAATTGACCTGATACATAGCAAAACACCACTTTATGATCTGCATGTACTACAGAAA-----CAGAAACAATA----------CTGAGAAGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33333273 628 + 229590362 TCCGTTTCT--------CCTCTT-CCCCCT----CTCCCTCTCC--------ACATCCCACTCTACCTTCCTAAGCTAATTAAATGATACCATGGAACGTATTTCATTTGCATTTGGCTC-AAAGGGCCAGGGAGTGATGGTGTGTGCTCATTAGACAGCTCTGAGTAGA--GGGATGTAATGAGCCCATTTTATTAGAGTCGTCA-CCTCGGCCCATCCTGCGAGACAATCTTGTAGTCACTGGGGAGAAAGAGAACCACAAACCTGAGAGCCTTGGTTTCAGGGCTGAAGAGTGGGAGGAGGACCCAACTTGGAGAAAGCCACAGGCTGCCCCGGGCCCTGGGCCCTGGGCTCTGGGCTCTGGCTGGGGGCAGGAGGGAGGAGGAGGAGGCAAGCCTGAGCCCAGGTGGCCCCTGTTACCATTACTGTCACCCTAAATGTGAGTCTCAGAACTCCACGCTGGCTTTGACTAGAGCCACAGCCGAGGGTCCCAACCTAGGGGCCCAGAACTCCTGGGGA-GCTAACCTCAGGGGTCTCCAGA-TTTAGTT-----GTGTATCATACGCTGTTTGCAGCTGGAAGAATTGACATGGTACATAGCAAAGCACCACTTTATGATCTGCATGTACTACAGAAA-----CAGAAACAATA----------CTGAGAAGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29844414 627 - 227556264 TCCGTTtct--------cctctt-ccccct----ctccctctcc--------acatcccactctaccttccTAAGCTAATTAAATGATACCATGGAACGTATTTCATTTGCATTTGGCTC-AAAGGGCCAGGGAGTGATGGTGTGTGCTCATTAGACAGCTCTGAGTAGA--GGGATGTAATGAGCCCATTTTATTATAGTCGTCA-CCTCGGCCCATCCTGCGAGACAATCTTGTAGTCACTGGGGAGAAAGAGAACCACAAACCTGAGAGCCTTGGTTTCAGGGCTGAAGAGTGGGAGGAGGACCCAACTTGGGGAAAGCCACAGGCTGCCCCGGGCCCTGGGCCCTGGGCTCTGGGCTCTGGCT-GGGGCAGGAGGGAGGAGGAGGAGGCAAGCCTGAGCCCAGGTGGCCCCTGTTACCATTACTGTCACCCTAAATGTGAGTCTCAGAACTCCACGCTGGCTTTGACTAGAGCCACAGCCAAgggtcccaacctaggggcccagaactcctgggga-gctaacctcaggggtctccaga-tttagtt-----gtgtatcatacgctgtttgcagctggaagaattgacatggtacatagcaaagcaccactttatgatctgcatgtactacagaaa-----cagaaacaata----------ctgagaagc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32610812 625 + 220367699 TCTGTTTCT--------CCTCttgcccctt----ctccctctcc--------acaTCCCACTCTACCTTCCTAAGCTAATTAAATGATACCATGGAACgtatttcatttgcatttggCTC-AAAGGGCCAGGGAGTGCCGGTGTGTGCTCATTAGACAGCTCTGAGTAGA--GGGATGTAATGAGCCGGTTTTATTATAGTCGTCA-TCTCGGCCCATCCTGCGAGACAATCTTGTAGTCACTGGGGAGAAAGAGAACCACAAACCTGAAAGCCTTGGTTTCAGGGctgaagagtgggaggaggacCCAACTTGGGGAAAGCCACCCGCTGCCCcaggccctgggccctgggctctgggctctggct-ggggcaggag---ggaggaggaggcgaGCCTGAGCCCAGGTGGCCCCTGTTACCATTACTGTCACCCTAAACATGAGTCTCAGAACTCCACGCTGGCTTTGACTAGAGCTGCAGCCAAGGGTCCCAACCTAGGGGCCCAGAACTCCCGGGGA-GCTAACCTCAGGGGTCTCCAGA-TTTAGTT-----GTGTATCATATGCTGTTTGCAGCTGGAAGAATTGACCTGGTACATAGCAAAGCCCCACTTTACGATCTGCATGTactacagaaa-----cagaaacaata----------ctGAGAAGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28126042 617 - 130588469 TCCGTTTCT--------CCTCTT-CCCCTT----CTCCCTCTCC--------ACATCCCGCTCTACCTTCCTAAGCTAATTAAATGATACCATGGAACGTATTTCATTTGCATTCGGCTC-AAAGGGCCAGGGAGTGCCGGTATGTGCTCATTAGACAGCTCTGAGTAGA--GGGATGTAATGAGCCCATTTTATTATAGTCGTCA-TCTCGGCCCATCCTGCGAGACAATCTTGTAGTCACTGGGGAGAAAGAGAACCACAAACCTGAGAGCCTTGGTTTCAGGGCTGAAGAGTAGGAGGAGGACCCAACTTGGGGAAAGCCACAGGCT-------GCCCTGGGCCCTGGGCTCTGGGCTCTGGCT-GGGGCAGGAG---GGAGGAGGAGGCGAGCCTGAGCCCAGGTGGCCGCTGTTACCATTACTGTCACCCTAAACATGAGTCGCAGAACTCCACGCTGGCTTTGACTAGAGCCACAGCCGAGGGTCCCAACCTAGGGGCCCAGAACTCCTGGGGA-GCTAACCTCAGGGGTCTCCAGA-TTTAGTT-----GTGTATCATACGCTGTTTGCAGCTGGAAGAATTGACATGGTACATAGCAAAGCACCACTTTACGATCTGCATGTACTACAGAAA-----CAGAAACAATA----------CTGAGAAGC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64581599 598 + 155834243 CCAATTTCT--------CCTCTT-CCCCTT----CTCCCTCTCC--------ACAGCCCACTCTACCTTCCTAAGCTAATTAAATTATACCATGGAACGTATTTCATTTGCATCTGGCTC-AAAGGGCCAGGGAGTGCCGGTGTGTGCTCATTAGACAGCTCTGCGTAGA--GGGATGTAATGAGCCAGTTTTACTACAGTCGTCA-TCTCGGCTCATCCTGCGAAACGATCTTGTAGTCATTGGGAAT-AAGTCAACCTCAAACCTGAGAGCCTGGGTTTCAGGGTTGAGGAGTGGGAGGAGGACCTGACTTGGGGAAAGTCCTAGGCT--------------GCCCTGGACCCTGGGCTCTGGCT-GGAGCAGGAG---GGAGGAGGAGACGAGCCTGGGCCCAGGTGGCCCCG-------TTACTGTCACCCTAAATGTGAGTCTCAGAATTCCACACTGGCTTTGACTACAGCCACAGCTGAGGGTCCC--CTTAGGGGCCCAGAACTCCTGGGGT-GCTAACCTCAGGGATCCCCAAA-TTTATTT-----GTGTATCATATGCTGTTTGCAGCTGGAAGAA-TGACCTGGTACGTAGCAAAGCAGCATTTTCTGACCTGCATGTCCTGCAGAAA-----CAGAAATAATA-----------TGAGAAGC i calJac3.chr7 C 0 C 0 s mm10.chr4 25394087 598 - 156508116 TCCTTTTCTCTGCAGTCCCTCGC-CCCCAC----CCCCATCTCCTGGCTTGTACATCCCGCTCCACCTTCCACAGCTAATTAAATGATAGCATGGAATGTTTCTCATTTGCGTTTGGCTC-TGAAGCACACCGG-----AGCGTGTGCTCATTAGGTGGCCCTGCAGAGGATGAGCTGTGCAGGGCTGGGAGCGC--CAATTGCCATTCGCAGCCCATCCTG-GAAGCCATTAAGTATTCACCGGAAAGAATCAGAACCCAGAACCCGAATTCCTGGGTTAGAAGGGTAAGTGTAGGCAGGAGGGCCACACCTGAGGACAGTCCTAGACT--------------GTCCCAGGTTCTGTGCTGTAGCT-AGGGCAGGAG------GGAAGAGGTATCCTTGGTCACAAATGACCCCTG------TCACTGACAACAGAGCTTTGGGTGTCAAAAATTCCCATCAGCTCTAGCTAGAGTC-TGACTAAAGCTCTTA--------GCCCAGAACTCCTGGGGT-GCCAGGTGCAGGGATCTC---A-TTTGTCCTACAAGAAAACCACA-GCTGTTGGCCAGTGGAGTCGCTGG-GGAGTGCAGAGCAGAGCTCTCC--------AGGTGTGTGCTGCTGGGATTGGTCAGAAAC--TC----------CTGAGAGCC i mm10.chr4 I 158 C 0 s canFam3.chr2 14972326 570 - 85426708 CTTGTTCTG--------CCTCTA-TCCCATAATATCACCCCTAC--------CCATCCCTCTCCACCTTTGGATGCTAATTAAATGATACCACAGAATGCATTTCATTTGCATTTGGTTCAAAAGGGCCACAGAGCAGCAATGCGTGTTCATTAAACAGCTCTGTGTAGA--GGGACGTAATGAAGCGGTTTTATTACAACCGTCA-TCTCAGCCCATCCTGGGAGGCAATTACGTATTCAACAGGAAGACGGAGAACCACAAACCTGAGTGCCTGGGTGGGAGGGGAGTGTGGAGGGGGGAAGGCCCCACTT-------------------------------------------------------GGGGCAGGAG------GGCGGAGGGGAGGCTGGGCCAGGACTACC-------------CTGCCACCAGGACTTTGAAGGGCAGTGATCCCTG-TGGCTTGGACCAGAGCCGTGGCCGAGGTCCCTAACCTGGTTCTCCAGAGCTCCTGGAGGTGCTCGTCACGAGGGGCCCCGGAGTCTGCCC-----GTGTGCCAAGCGCTGTCTGTAGATGGAATAATTGGTGCGGCACATAGCACAGCTCCAGCTTATTATGTGCATGTGCTGCCGTGA-----TCCCAACCACAGAGGAAGCTCCCGAGAAGC i canFam3.chr2 I 586 C 0 e nomLeu3.chr24 447476 4 - 28733288 I a score=702516.000000 s hg38.chr1_KI270760v1_alt 17126 250 + 109528 ATTTCTGCATCCCTGGTGGCATTTGTCCATTGGGTATTTCCTCTGTCGTTGGGATCTAATAGCAGCGATTAGAGCAATGATATaataatagc-agccatcattccttgagtatctactgtg-------------------------------------------tgctggggacc-------tgggcttagcgatttacctggattatttcattcaatcctcaaacca-cccctcaa-ggg------taggtattatgttatcatccctactttatggatgaggaaattgtggctcagagaattaagtg s panTro4.chr1 30448621 250 + 228333871 ATTTCTGCATCCCTGGTGGCCTTTGTCCATTGGGTATTTCCTCTGTCGTTGGGATCTAATAGCAGCAATTAGAGCAATGATATaataatagc-agccctcattccttgagtatctactgtg-------------------------------------------tgctggggacc-------tgggcttagcgatttacctggattatttcattcaatcctcaaacca-cccctcaa-ggg------taggtattatgttatcatccctgctttatggatgaggaaactgtggctcagagaattaagtg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30036746 251 - 229942017 ATTTCTGCATCCCTGGTGGCCTTTGTCCTTTGGGTATTTCCTCTGTCATTGGGATCTAATAGCAGCGATTGGAGCAATGATATaataatagc-agccatcattccttgagtatctactgtg-------------------------------------------tgctggggccc-------tgggcttagcgatttacctggattatttcatttagtcctcaaacca-cccctcaagggg------taggtattatgttatcatccctgctttatggatgaggaaattgtggctcagagaattaagtg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 447480 255 - 28733288 ACTCCTGCA----TGGCAGTCTTTGTTCATTATTTATTTCCTCAGTCATTGTTATTGAATAATAGCTGTTTTAGTAGTGATataataatatctatttagtgcttattgtagacttactgag-------------------------------------------cattgttgtccca-ataattgtccaaattattgacttagattatctcatttaat-ctcacaaca-attctggt-ggggtcagatagttat--tgctattattctccttttatggataaggaaattgaggttca-AGAATAATGTG i nomLeu3.chr24 I 4 I 2109 s rheMac3.chr1 33333901 247 + 229590362 ATTTCTGCATCCCTGGTGGCCTTTGTCCATAGGGTATTTCCTCTGCTGTTGGGATCTAATAGCAGCGATTGGAGAAATTATATaataatagc-agccatcattccttgaggacctactgtg-------------------------------------------tgctaggaccc-------tgggcttagcgacttaccgggattatttcatttaatcctcaaacca-cccctcag-ggg------taggtattatgtt---atccctactttatggatgaggaaattgtggttcagagaattaagtg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845041 247 - 227556264 atttctgcatccctggtggcctttgtccattgggtatttcctcTGTTGTTGGGATCTAATAGCAGCGATTGGAGAAATTATATaataatagc-agccatcattccttgaggacctactgtg-------------------------------------------tgctagggccc-------tgggcttagcgacttacctggattatttcatttaatcctcaaacca-cccctcag-ggg------taggtattatgtt---atccctactttatggatgaggaaattgtggttcagagaattaagtg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32611437 247 + 220367699 ATTTCTGCATCCCTGGTGGCCTTTGTCCATTGGGTATTTCCCCTGTTGTTGGGATCTAATAGCAGTGATTGgagaaataatgtaataatagC-AGCCATCATTCCttgaggacctactgtg-------------------------------------------tgctagggcCC-------TGGGCTTAGCGACTTacctggattatttcatttaatcctcaaaccA-CCCCTCAG-GGG------TAGGTATTATGTT---ATCCCtactttatggatgaggaaattgtGGTTCAGAGAATTAAGTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28126659 250 - 130588469 ATTTCTGCATCCCTGGTGGCCTTTGTCCATTGGGTATTTCCTCTGTTGTTGGGATCTAATAGCAGCAATTGGAGAAATTATATaataatagc-agccatcattccttgaggacctactgtg-------------------------------------------tgctagggccc-------tgggcttagcgacttacctggattatttcatttaatcctcaaacca-cccctcag-ggg------tatgtattatgttatcatccctactttatggatgaggaaattgtggttcagagaattaagtg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582197 249 + 155834243 ATTTCTGCATCCCTGCTGGCCTTTGTCCATTGAGTGTTTACTCTGTCGTTGGGAGCTAATGGCAACAATTGGAGCAATGATAGaataatagc-agccatcattccgtcagtacctactgtg-------------------------------------------tgctggggccc-------tgggcttagtgatttacctggattatctcatttaatcctcaaatcaccccctcag-ggg------taggtat--tgctatcattcctacttgatggatgaagaaattgtggctcagagaattaagtg i calJac3.chr7 C 0 C 0 s mm10.chr4 25394685 286 - 156508116 ACCCCAACATCACTGATAGCCTCAG-CCAGTGTTTGTATCCTCA--TCTTGGGGCCTAATGGTAGCCCTTGGGGCCATGATGCAAAAACAGG-TACCAGAGGCTTCTAGGTACCAAAGGAGGAGGTCAGAAAGGAAGTTGAGAGTAGACCTAGAGCACAGATGCTGCTGTCAACCCCTGTGAGGTGCTGGGTGGCAAACT--GATGACTAcatccagtcctcacagca-gcc---ag-ggg------taag------gctgtcatccccaatttacagatacagaaagtgaggctcagagaTGCATGTA i mm10.chr4 C 0 C 0 s canFam3.chr2 14972896 246 - 85426708 CCTTCTGCACTCCTGGTGGCCCCCGTCTGCTGTGCATGTCCTCTGTCACTGAGATCTCCCTGTGACAGTGGGGGCAGTGAAGGAACAACAGC-CGCTGCC-CTCCCCAAGGTcctactgtg-------------------------------------------tgc-agggcat-------caggcccagtgactgacctgggtgacctccctgaagcctcacaacg-tctctcag-ctg------taggta--aggtcaggatccccatttcatgggtgaggaaaccgaggctcagagagctgagtg i canFam3.chr2 C 0 C 0 a score=471569.000000 s hg38.chr1_KI270760v1_alt 17376 199 + 109528 acgtgttcagagacatgcagctggattgtggtgaactggggatttgatcttaggtctgcccaacaccacagtcctctccactgctctctgctacctcCAGTTTACAAGGACAGTTCATAGCATG---GGGTTCCAACACTTTTAGTAATGTTAAATTGAAAAAATCTGGCCTCGCACTCCAAATGTTCTGAGTttaattaag s panTro4.chr1 30448871 199 + 228333871 acatgttcagagacatgcagctggattgtggtgaactggggatttgatcttaggtctgcccaacaccacagtcctctccactgctctctgctacctcCAGTTTACAAGGACAGTTCATAGCATG---GGGTTCCAACACTTTTAGTAATGTTAAATTAAAAAAATCTGGCCTCGCACTCCAAATGTTccgactttaattaag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30036997 198 - 229942017 acatgttcagagacatgcagctggattgtggtgaactggggatttgatcttaggtctgcccaacaccacagtcctctccactgctctctgctacctcCAGTTTACAAGGACAGCTCATAGCATG---CGGTTCCAACACTTTTATTAATGTTAAATTT-AAAAATCTGGCCTCGCACTCCAAATGTTctgactttaattaag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33334148 198 + 229590362 acacgttcaaagacacatagccagattgcggtaaactggggatttgatcttagacctgcccaacaccacagcccgctccactgctctctgctacctcCAGTTTACAAAAACAGTTCATAGCACG---GGATTCCAACACTTTTATTAATGTTAAATTT-AAAAATCTGGGTTTGCATTCCAAATGTTctgactttaattaag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845288 198 - 227556264 acatgttcaaagacacatagccagattgcggtaaactggggatttgatcttagacctgcccaacaccacagcccgctccactgctctctgctacctcCAGTTTACAAAAACAGTTCATAGCACG---GGGTTCCAACACTTTTATTAATGTTAAATTT-AAAAATCTGGGTTTGCATTCCAAATGTTctgactttaattaag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32611684 198 + 220367699 ACACGTTCAAAGACACATAGCCAGATTGTGGTAAACTGGGGATTTGATCTTAGACCTGCCCAACACCACAGTCCGCTCCACTGCTCTCTGCTACCTCCAGTTTACAAAAACAGTTCATAGCACG---GGGTTCCAACACttttattaatgttaaattt-aaaaatctgggtTTGCATTCTAAATGTTCTGACTTTAATTAAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28126909 198 - 130588469 atgtgttcaaagacatgcagccggattgcggtaaactggggatttgatcttagacctgcccaacaccacagtccgctccactgctctctgctacctcCAGTTTACAAAAACAGTTCATAGCATG---GGGCTCCAACACTTTTATTAATGTTAAATTT-TAAAATCTGGCCTTGCATTCCAAATGTTctgactttaattaag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582446 189 + 155834243 acatgttcaaagacacgcagc-------tggtgagctgggga-ttgatcttaggtcttcccaagaccaca-tcctctcctctgctctcggctacctcCACTTTACAAGAACAGCTCATAGCATA---GGGTCCCAACAATTTTATTAACGTTAAATTT-AAAAATCTGGCCTCCCACTCCAAATGTTctgactttaattaag i calJac3.chr7 C 0 C 0 s mm10.chr4 25394971 151 - 156508116 ----------------------AGACTTTGAACCACCAAGGATCAGACCTGAAGTCCGTGTCCCCCCCCCCCCCGCCCCACTGCCC----CTGCTTTGAG-GAGCAAAGTCAGCTCCCA------------CCCAGCAC--TTACCAGTGTTAATTTA----------CCCCCGCAGCCTCAGTGTTCTAGCCATTGCCTGG i mm10.chr4 C 0 C 0 s canFam3.chr2 14973142 191 - 85426708 ccgtgtccagagccacccagccaggatgtggcacagtgaggattcggtcctaggtccgc-tgataccacagc---cTCGGTGGGGGTCTCCTGCCCAC---TTACATGGACAGCTCACAGTGTGCAAGGGTCCTGATACTTGTATTAAGATT---TTT-AAAAATCCATCCTCACATTCCAaatattctgatgttcattaag i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 447735 2109 - 28733288 I a score=627424.000000 s hg38.chr1_KI270760v1_alt 17575 202 + 109528 ggctttctgtgtgcccagctctgttcc-agaactttacaaatattacctcacttaatccacacaaagactccgtgagggaggtagtatttattacccccattttacagatgaggaaaccaaggcacagaaatctttggttaattcctcaagtcacagagctggtgttgaattgattgggctggaattgggtctggcggctggg s panTro4.chr1 30449070 201 + 228333871 ggctttctgtgtgcccagctctgttcc-agaactttacaaatattacctcacttaatccacacaaagactccgtgagggaggtagtatttatta-ccccattttacagatgaggaaaccaaggcacagaaatctttggttaattcctcaagtcacagagctggtgttgaattgattgggctggaattgggtctggcggctggg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30037195 201 - 229942017 ggctttctgtgtgcccagctctgttcc-agaactttacaaatattaccccatttaatccacacaaagactcagtgagggagctactatttatta-ccccattttacaggtgaggaaaccaagtcacagaaagctttggttaattcctcaagtcacagagctggtgttgaattgattgggctggaattgggtctggcagctggg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 449844 197 - 28733288 ggctagctttgtgcctggctctgttctaagcattttataagtattatgccatttaatcctcacaatgaccctatgagggaggcacta-ttattacccccgttttttagataagcaaaccaaggcatagaatggttaggtcgcttcctcaggtcacaatgctggt-----acaggctaggcagagcttaaatccagcagccagc i nomLeu3.chr24 I 2109 C 0 s rheMac3.chr1 33334346 201 + 229590362 ggctttctgtgtgcccagctctgttcc-agaactttccaaatattacctcatttaatccacagaaagactcagtgagggaggcactatttatta-ccccattttacagatgaagaaaccaaggcacagaaagctttggttacttcctcaagtcacagagttggtgttgaattggttgggctggaattgggtccggcagctggg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845486 201 - 227556264 ggctttctgtgtgcccagctctgttcc-agaactttccaaatattacctcatttaatccacagaaagactcagtgagggaggcactatttatta-ccccattttacagatgaagaaaccaaggcacagaaagctttggttacttcctcaagtcacagagttggtgttgaattggttgggctggaattgggtccggcagctggg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32611882 201 + 220367699 GGCTTTCTGTGTGCCCAGCTCTGTTCC-AGAACTTTCCaaatattaccttatttaatccACAGAAAGACTCAGTGAGGGAGGCACTAtttatta-ccccattttacagatgaggaaaccaaggcacagaaagCTTTGGTTACTTCCTCAAGTCACAGAGTTGGTGTTGAATTGGTTGGGCTGGAATTGGGTCCGGCAGCTGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28127107 201 - 130588469 ggctttctgtgtgcccagctctattcc-agaactttccaaatattacctcatttaatccacacaaagactcagcgagggaggcactatttatta-ccccattttacagatgaggaaaccaaggcacagaaagctttggttacttcctcaagtcacagagctggtgttgaattgattgggctggaattgggtccggcagctggg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582635 200 + 155834243 ggctttctgtttgcccaactctgttgc-agaactttacaaatattatctcatttaatctacacaaagacttaatgggggaggcactatttatta-ccccattttacagatgaggaaatcaaggcacagaaagctttctttacttcctcaagtcacagagctggtgttgtgttgactgggctgga-tggggtccagcagctggg i calJac3.chr7 C 0 C 0 s mm10.chr4 25395122 148 - 156508116 AGCCTCCTGTG-GCC---CTCTCTTCT-AGAACCT-------------------------CGCAAAGAGTC--TGACAGAGGCAC-GTTCCTCG-GTATGttttacagacaagaaaactgagtca-----------ggtcacttcttcaag-cgcagagtcagc---------accaggcagaggttgggctccacagccagg i mm10.chr4 C 0 I 2408 s canFam3.chr2 14973333 193 - 85426708 ggatttctgcgtgtccagctctattct-agaactttacacatatgatctcatttaatcctcac--tgaccctatgtggaaagaatta-gtattg-ccccaccttacagatgagaacaccaaggcgtggcaaggtccggtcgcttcctcaaggcacagccctggt-----acaggccaggcgggcactgaatctggtggtcggg i canFam3.chr2 C 0 C 0 a score=171735.000000 s hg38.chr1_KI270760v1_alt 17777 58 + 109528 tgcacaagtccacaccttacccaACTCTA-CCCTCATGGAGCTGGGCTATGGTTCCACA s panTro4.chr1 30449271 58 + 228333871 tgcacaagtccacaccttactcaACTCTA-CCCTCATGGAGCTGGGCTATGGTTCCACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30037396 58 - 229942017 tgcccaagtccacaacttacccaACTCTA-CCCTCATGGAGCTGGGCCATGGTTCCACA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 450041 58 - 28733288 t-ctcaagtccacactttGCCTACCTTTACCCCTCATGGAGCTGGAATATGTTTCCACA i nomLeu3.chr24 C 0 I 20 s rheMac3.chr1 33334547 58 + 229590362 tgcacaattccataccttacccaACTCCA-TCCTCATGGAGCTGGGCTATGGTACCACA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845687 58 - 227556264 tgcacaattccataccttacccaACTCCA-TCCTCATGGAGCTGGGCTATGGTACCACA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32612083 58 + 220367699 TGCACAATTCCATACCTTACCCAACTCCA-TCCTCATGGAGCTGGGCTATGGTACCACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28127308 58 - 130588469 tgcacaagtccacaccttacccaACTCCA-TCCTCATGGAGCTGGGCTACGGTTCCACA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582835 58 + 155834243 atcccaagtccacaccttacccaACTCCA-CCCTCATGGAGCTGGGCTCTGGTTCCACA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14973526 59 - 85426708 cttccaggtccacacccGACCCAGCTCTATCCCTCCCAGAGCTAGGATAGGATTTCACC i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=84612.000000 s hg38.chr1_KI270760v1_alt 17835 33 + 109528 ----Aatcagtttcctactgc------aaaaaattaccaaaaa s panTro4.chr1 30449329 33 + 228333871 ----Aatcagtttcctactgc------aaaaaattaccaaaaa i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30037454 33 - 229942017 ----Aatcagtttcctactgc------aacaaattaccaaaaa i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33334605 33 + 229590362 ----AGtcagtttcctactgc------aacaaattaccaaaaa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845745 33 - 227556264 ----AGtcagtttcctactgc------aacaaattaccaaaaa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32612141 33 + 220367699 ----AGTCAGTTTCCTActgc------aacaaattaccaaaaa i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28127366 33 - 130588469 ----AGtcagtttcctactgc------cacaaattaccaaaaa i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582893 33 + 155834243 ----Gatcagcttcctactgc------aacaaattaccaaaaa i calJac3.chr7 C 0 C 0 s canFam3.chr2 14973585 43 - 85426708 TAtgtgctcatttcctacggcagttagaacaaagcaccacaaa i canFam3.chr2 C 0 I 98 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 450099 20 - 28733288 I a score=1523376.000000 s hg38.chr1_KI270760v1_alt 17868 664 + 109528 cttagtggcttcaacattacaaactggcagtgcacagtggctcacacccataatcctagcactttgtggggttcaggtgggaggatttcttgaggcccggagttcaagaccagcctcggcaacatagtgaaactcctgtctctacaaaaaaatttaaaacaattagccggtgtggtggcatgtgctcgtagtcccagctactcaggaagctaaggtgggaggatcccttgagcccaggagttcaaggcttcagtgacctgtgattgtgccattgcactccagccgggtgacagagtgagatcttgtcttaaaaataataaTAggctggggacagtggctcatacctgtaatctcagaactttgagaggccaaggcgggcagatcacttgaggtcaggagttcaagaccagcttggccaacatggc-gaaattccgtctctacgaaaaatacaaaaattagctgggcatggtggt-----------------gctaccctggaggctgaggcatgagaatcacttgaacctgggagacggaggttgcagtgagccaagatcgcaccactgcactccagcctgggcaacagagtgagactccgtctcgataataataatgatgataatgataatcaaagtgtctgcaaggttgtgtcccttctggaggcctcctggggagaaca s panTro4.chr1 30449362 664 + 228333871 cttagtggcttcaacattacaaactggcagtgcacagtggctcacacccataatcctagcactttgtggggttcaggtgggaggatttcttgaggcccggagttcaagaccagcctcggcaacatagtgaaactcctgtctctacaaaaaaatttaaaacaattagccagtgtggtggcatgtgctcgtagtcccagctactcaggaagctaaggtgggaggatcccttgagcccaggagttcaaggcttcagtgacctgtgattgtgccattgcactccagcctggtgacagagtgagatcttgttttaaaaataataaTAggctggggacagtggctcatacctgtaatctcagaactctgagaggccaaggcgggcggatcacttaaggtcaggagttcaagaccagcttggccaacatggc-gaaattccgtctctacgaaaaatacaaaaattagctgggcatggtggt-----------------gctaccctggaggctgaggcatgagaatcacttgaacctgggagacggaggttgcagtgagccaagatcgcaccactgcactccagcctgggcaacagagtgagactccgtctcGataataataataatgataatgataatcaaagtgtctgcaaggttgtgtcccttctggaggccccatggggagaaca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30037487 663 - 229942017 cttagtgacttcaacattacaaactggcagtgcacagtggctcacacccataatcctagcactttgtggggttcagatgggaggatttcttgaggcccagagttcaagaccagcctaggcaacatagtgaaacctctgactctacaaaaatgtttaaaacaattagccagtgtggtggcatgtgcttgtagtcccagctactcaggaagctaagatgggaggatcccttgagcccaggagttcaaggcttcagtgacctgtgattgtgccactgtactccagcttggtgacagagtgagatcctgtcttaaaaataataaTAggctggggacagtggctcatatctgtaatctcagaactttgagaggccaaggcgggcggattacttgaggtcaggagttcaagaccagcttggccaacatggc-gaaattccgtctctacaaaaaatacaaaaattagctgggcatggtggt-----------------gctaccttggaggctgaggcatgagaatcacttgaacttgggaga-ggaggttgcagtgagccaagatcacaccactgcactccagcctgggcaacagagtgagactccgtctcaataataataataatgataatgataatcgaagtgtctgcaaggttgtgtcccttctggaggctccatggggagaaca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33334638 664 + 229590362 cttagtggcttcaacaatacaaactggcagtgcacagtggtttatacctgtaatcctagcactttgtggggttcaggtgggaggatttcttgaggcccggagttcaagaccagactgggcaacatagtgaaacccctgtctctacaaaaaaatttaaaacgattagccagtgtaatggcacgtgcctgtagtcccagctactcaggaggctaacgtgggaggatcccttgagcccaggagttcaaggcttcagggatccgtgactgtgcgactgcactccagcctggtgacagaatgagatcctgtcttaaaaataataaTAggctgggcgcagtggctcatacctgtaatctcagaacttcgagaggccaaggcaggcagatcacttgcggtcaggagttcaagaccagcttggtcaacatgacaaaaattctgtctctacgaaaaatacaaaagttagctgggcatggtggt-----------------gctaccttggaggctgaggcatgcgaatcacttgaacctgggagacagaggtcgcagtgagccaagatcacaccactgcactccagcttgagtgacagagtgagactccgtctcaataataataataatgatattgataatcaaagtgtctgcatggttgtgtcccttctggaggctccgt-gggagaaca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29845778 664 - 227556264 cttagtggcttcaacaatacaaactggcagtgcacagtggtttatacctgtaatcctagcactttgtggggttcaggtgggaggatttcttgaggcccggagttcaagaccagactgggcaacatagtgaaacccctgtctctacaaaaaaatttaaaacgattagccagtgtaatggcacgtgcctgtagtcccagctactcaggaggctaacgtgggaggatcccttgagcccaggagttcaaggcttcagggatccgtgactgtgcgactgcactccagcctggtgacagaatgagatcctgtcttaaaaataataaTAggctgggcgcagtggctcatacctgtaatctcagaactttgagaggccaaggcaggcagatcacttgaggtcaggagttcaagaccagcttggtcaacatgacaaaaattctgtctctacgaaaaatacaaaagttagctgggcatggtggt-----------------gctaccttggaggctgaggcatgcgaatcacttgaacctgggagacggaggttgcagtgagccaagatcacaccactgcactccagcttgagcgacagagtaagactccgtctcaataataataataatgatattgataatcaaagtgtctgcatggttgtgtcccttctggaggctccgt-gggagaaca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32612174 662 + 220367699 cttaGTGGTTTCAACAATACAAACTGGCAGTGCACAGtggtttatacctgtaatcctagcactttgtggggttcaggtgggaggatttcttgaggcccggagttcaagaccagactgggcaacatagtgaaacccctgtctctacaaaaaaatttaaaacaattagccagtgtaatggcacgtgcctgtagtcccagctactcaggaggctaacgtgggaggatcccttgagcccaggagttcaaggcttcagggATCCGTGac--tgcgactgcactccagcctggtgacagaatgagatcctgtcttaaaaataataataggctgggcgcagtggctcatacctgtaatctcagaactttgagaggccaaggcaggcagatcacttgaggtcaggagttcaagaccagcttggtcaacatgacaaaaattctgtctctacaaaaaatacaaaagttagctgcgcatggtggt-----------------gctaccttggaggctgaggcatgcgaatcacttgaacctgggagatggaggttgcagtgagccaagatcacaccactgcactccagcttgagcgacagagtgagactccgtctcaataataataataatgatattgatAATCAAAGTGTCTGCAAGGTTGTGTCCCTTCTGGAGGCTCCGT-GGGAGAACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28127399 663 - 130588469 cttagtggcttcaacaacacaaaccggcagtgcacagtggctcatacctgcaatcctagcactttgtggcgttcaggtgggaggatctcttgaggcccggagttcaagaccagactgggcaacatagtgaaacccctgtctctacaaaaacatttcaaacaattagccagtgtgatggcacgtgcttgtagtcccagctactcaggaggctaacgtgggaggatcccttgagcccaggagttcaaggcttcagggatccgtgattgtgcgactgcactccagccgggtgacagaatgagatcctgtcttaaaaataaTATTAggctgggcgcagtggctcatacctgtaatgccagaattttgagaggccaaggcaggcagatcacttgaggtcaggagttcaagaccagcttggtcaacatgac-aaaattccgtctctacgaaaaatacaaaagttagctgggcatggtggt-----------------gctaccttggaggctgaggcatgagaatcacttgaacctgggagacggaggttgcagtgagccaagatcacgccactgcactccagcctgagtgacagagtgagactccatctcaataataataataatgatattgataatcaaagtgtctgcaaggttgtgtcccttctggaggctccgt-gggagaaca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64582926 668 + 155834243 cttagtggcttcaacaacacaaaccggcagtgcacagtggttcccacctgtaatcctagcactttgcagggctcaggtgggaggatttcttgaggccaggagttcgagaccagcctgggcaacgtagtgaaagccctgtctctgcaaaaacatttaaaacaattagccagggtgatggcacgtgcctgccatcccagctattcaggaggctgaggtgggaggatcccttgagcccaggagttcaaggctgcagtgagctgtgattgtgccactgcactccagtctgatgacagagtgagatcctgtcttaaaaataataaTAggctgggtgcagtggctcacatctgtaattccagaactttgagaggccaacacaggcaaatcacttgagatcaggcgttagagaccagcttggccaacaaggc-aaaactctgtctctcctaaaaatacaaaacttaggcagccgtggtggtgcgcacctgtaatcccagccattcaggaggctgaggcatgagaatcacttgaacctgggagatggaggtcgcagtgagccgagatcacaccactgcactgcagcctgtgtgacagaatgagactcagtttcgataacaata------------ataatcaaagtgtctgcaaggtcgtgtcctttctggagactccat-gagagaaca i calJac3.chr7 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 450099 20 - 28733288 I e canFam3.chr2 14973628 98 - 85426708 I a score=927605.000000 s hg38.chr1_KI270760v1_alt 18532 355 + 109528 cacttcctcgcctgctccagctcctagaggccacctggattcttaggcttgtggtcccttcctccacctcaaagccagccagcatcggcagctcaagtccttctcacaccacatcactccaacctcctcctctgc--cttcttccactttaaggaccctcgtgattacatggggcccacctggataatccaaggtaattcctctatttttaagatctgctaaatagcaaccttaattccatgtgcagcttt-attttcatttgccat---gtaatgtaaagta----------acattccaggaattaggaagtggacctctttaggtgccactattctgcccaccTTAATTGaataacaactattttggg s panTro4.chr1 30450026 355 + 228333871 cacttcctcgcctgctccagctcctagaggccacctagattcttaggcttgtggtcccgtcctccacctcaaagccagccagcatcggcagctcaagtccttctcacaccacatcactccaacctcctcctctgc--cttcttccactttaaggaccctcgtgattacatggggcccacctggataatccaaggtaattcctctatttttaagatctgctaaatagcaaccttaattccatgtgcagcttt-attttcatttgccat---gtaatgtaaagta----------acattccaggaattaggaagtggacctttttaggtgccaccattctgcccaccTTAATTGaataacaactattttggg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30038150 355 - 229942017 cacttcctcacctgttccagctcctagaggccacctggattcttaggcttgtggtcctttcctccacctcaaagccagccagcatcggcagctcaagtccttctcacaccacatcactccactctcctcctctgc--cttcttccactttaaggaccctcgtgattacatggggcccacctggataatccaaggtaattcctccatttttaagatctgctaaataacaaccttaattccatgtgcagcttt-attttcatttgccat---gtaatgtaaagtg----------acattccaggaattaggaagtggacctctttaggtgccactattctgcccaccTTAATTtaataacaacaattttggg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33335302 355 + 229590362 cacttcctcgcctgctccagctcctggaggccacctggatgcttcggcctgtggtcccttcctccacctcaaagccagctagcatcggcagctcaagtccctgtcacaccacatcactccaacctcctcctctgc--cttcttccactttaaggaccctcatgattacatggggcccacctggataatccaaggtaattcctctatttttaagatctgctaaataacaaccttaattccatgtgcagcttt-attttcgtttgccat---gtaatgtaaaata----------acattgcaggaattaggaagtggacctctttagatgccactattctgcccaccTTCATTTaataatacctattttagg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29846442 355 - 227556264 cacttcctcgcctgctccagctcctggaggccacctggatgcttcggcctgtggtcccttcctccacctcaaagccagccagcattggcagctcaagtccctctcacaccacatcactccaacctcctcctctgc--cttcttccactttaaggaccctcatgattacatggggcccacctggataatccaaggtaattcctctatttttaagatctgctaaataacaaccttaattccatgtgcagcttt-attttcgtttgccat---gtaatgtaaaata----------acattgcaggaattaggaagtggacctctttagatgccactattctgcccaccTTCATTTaataatacctattttagg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32612836 355 + 220367699 CACTTCCTCGCCTGCTCCAGCTCCTGGAGGCCACCTGGATGCTTCGGCTTGTGGTCCCTTCCTCCACCTCAAAGCCAGCCAGCGTTGGCAGCTCAAGTCCCTCTCACACCACATCACTCCaacctcctcctctgc--cttcttcCACTTTAAGGACCCTCGTGATTACAtggggcccacctggataatccaaggTAATTCCTCTGTTTTTAAGATCTGCTAAATAACAACCTTAATTCCatgtgcagtttt-attttcatttgccat---gtaatgtaaaata----------aaattgcaggAATTAGGAAGTGGACCTCTTTAGATGCCGCTATTCTGCCCACCTTAATTTAATAACAACTATTTTGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28128062 355 - 130588469 cacttcctcacctgctccagctcctggaggccacctggatgcttcggcttgtggtcccttcctccacctcaaagccagccagcatcagcagctcaagtccctctcacaccacatcactccaacctcctcctctgc--cttcttccactttaagaaccctcgtgattacatggggcccacctggataatccaaggtaattcctctgtttttaagatctgctaaataacaaccttaattccatgtgcagcttt-attttcgtttgccat---gtaatgtaaaata----------acattgcaggaattaggaagtggacctctttagatgccactattctgcccaccTTAATTtaataacaactattttggg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64583594 343 + 155834243 cacttcctcgcctgctccagctcctgcaggccacctggattcttcggctcgtggtccct---------tcaaagtcagccagcatcggcagctcaagtccctctcacaccacgtcactccaacctcctcttctgc--ctt-ttccactttaaggacccttgtgattatattgggccca-ctggataatccaaggtaattcttctg-ttttaaaatctgctgaataacaaccttaattccacgtgcagcttt-actttcgtttgccat---gtaatgtaaagtg----------acattccaggaattaggaagtggacctctttgggggccactattctgcccaccTTAATTtaataacaactattttgcg i calJac3.chr7 C 0 I 1 s canFam3.chr2 14973726 364 - 85426708 cgtctccctgccttgcccagctcccagaagctgcctgtactccttggcttgcagtgcccgctccgtcctcgaagccaattaa----agcagatcggatcttaccctcttcgcgcagctctggcccgct-ttttgcctcttctgtccctttagggaccattatgattgcactgggcccatctggacaatccaggctaatcccagta-gtttaaggtcagctaattagcatccttcattccattgacaaccttaattcccctttgctacagagtaatgcacagtaccgcatccacaagctccggggattaggacacagacacccctggg-gtcattgttcggcctacctcaGTGTATTGACAGCTGTCCTGGT i canFam3.chr2 I 98 C 0 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 450099 20 - 28733288 I a score=746870.000000 s hg38.chr1_KI270760v1_alt 18887 247 + 109528 ggagcacttgctccatttcaggcaccacttgcagaggctttactcatatcactcatttaa-ccccac-aaaaaacaaatgagggagtgttgaccactcccactttacagataggaagactgaggctcaggagacagaggggctgccaggattctcccagggccagCCCAGG--TCTGGTGTTCCT-CTGGGGGCTGACAGTTCTGACTCCAGAGCCCACTCTCCT----------CCCTGCAATGTG----------TTT-GAGAATGGAGTA s panTro4.chr1 30450381 248 + 228333871 cgagcgcttgctccatttcaggcaccacttgcagaggctttactcatatcactcatttaa-ccccacaaaaaaacaaatgagggagtgttgaccactcccactttacagacaggaagactgaggctcaggagacagaggggctgccaggattctcccagggccagcccagg--tctggtgttcct-ctgggggctgacaggtctgactccagagcccactctcct----------ccctgcaatgTG----------TTT-GAGAATGGAGTA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30038505 248 - 229942017 ggagcacttgctccatttcaggcaccatttgcagaggctttactcaaatcactcatttaacccccac-aaaaaacaaatgagggagtgctgaccactcccactttacagataggaagactgaggctcaggagacagaggggctgccaggattctctcagggccagcccagg--tctggtggtcct-ctgggggctgacaggtctgactccagagcccactctcct----------CCTTGCAATGTG----------TTT-GAGAATGGAGTA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 450119 261 - 28733288 ggaggacctgatatgtgtcacgcactg--tacaagggtttttctcacattatttagctca----cac-aatagccaagcgaaggagagatcaccacttccacttctcaggtaagagcactcaggctcagaagacaga--ggctaccaggatt-tgccaggaccagccaaggtctctgatggccctactgggttctgggggatctgactccagagtcc-CCCTCCTCTCGACATCACCCTACAGAATGCAACAGCAACTTT-GAGAATGGAACA i nomLeu3.chr24 I 20 C 0 s rheMac3.chr1 33335657 248 + 229590362 ggaccacttgctccatttcaggcaccatttgcagaggctttactcatatcactcatttaacccccac-aaaaaacaaatgagggagtgctcaccactcccactttatagataggaagactgaggctcagGAGACAGAGGGGCTGCCAGGATTCTCCCAGGACCAGCCCAGG--TCTGATGGTCCT-CTGGGGGCTGACAGATCTGACTCCAGAGCCCACTCTCCT----------CCCTGCAATGTG----------TTT-GAGAATGGAGTA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29846797 248 - 227556264 ggaccacttgctccatttcaggcaccatttgcagaggctttactcatatcactcatttaacccccac-aaaaaacaaatgagggagtgctcaccactcccactttatagataggaagactgaggctcaggagacagaggggctgccaggattctcccaggaccagcccagG--TCTGATGGTCCT-CTGGGGGCTGACAGATCTGACTCCAGAGCCCACTCTCCT----------CCCTGCAATGTG----------TTT-GAGAATGGAGTA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32613191 248 + 220367699 GGACCACTTGCTCCATTTCAGGCACCATTTTTAGAGGCTTTACTCATATCACTCATTTAACccccac-aaaaaacaaatgagGGAGTGCTCACcactcccactttacagataggaAGACTGAGGCTCAGGAGACAGAGGGGCTGCCAGGATTCTCCCAGGGCCAGCCCAGG--TCTGATGGTCCT-CTGGGGGCTGACagatctgactccagagcccactcTCCT----------CCCTGCAATGTG----------TTT-GAGAATGGAGTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28128417 248 - 130588469 ggaccgcttgctccatttcaggcaccatttgcagagactttactcatatcactcatttaacccccac-aaaaaacaaatgagggagtgctcaccactcccactttacagataggaagactgaggctcaggagacagacggactgccaggattctcccagggccagCCCAGG--TCTGGTGGTCCT-CTGGGGGCTGACAGATCTGACTCCAGAGCCCACTCTCCT----------CCCTGCAATGTG----------TTT-GAGAATGGAGTA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64583938 248 + 155834243 ggaccacctgctcaatttcagacaccatttgcagatgctttactcatgtcactcatttaacccccac-aaaaaacaaatgagggagtgcccaccactcccattttacagataggaagcctaaggctcaggagaCAGAGGGGCTGCCGGGATTCTCCCAGGTCAGGCCCAGG--TCTGATGGTCCT-CTGGGGGCTAACAGTTCTGAAGCCAGAGCCCACGCCCCT----------CCCTGCAATATG----------TTT-GAGAATGGAATA i calJac3.chr7 I 1 I 36 s canFam3.chr2 14974090 234 - 85426708 Ggaggacctactatgtgtcatacac--tttgcgggggctttactc----ctcttactaaatgctcac-aacgacgaagtgagggaaggactaccactcccactttacagg---------tgaggctcaggagacagagacgctgctgggacttctcaagggtcaGCCTAGGTCTCCGGTGGTCCT-CTAGGGTCTGATAGATCTGATTGCAGAGCC--CCCTCCT----------CCCAGCATTGTA----------CCTAGAGAATGGATGA i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=1672.000000 s hg38.chr1_KI270760v1_alt 19134 3 + 109528 -CGG s panTro4.chr1 30450629 3 + 228333871 -CGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30038753 3 - 229942017 -GGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 450380 3 - 28733288 -GGT i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33335905 3 + 229590362 -GGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29847045 3 - 227556264 -GGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32613439 3 + 220367699 -GGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28128665 3 - 130588469 -GGG i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14974324 3 - 85426708 TGG- i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e calJac3.chr7 64584186 36 + 155834243 I a score=1775108.000000 s hg38.chr1_KI270760v1_alt 19137 659 + 109528 -CTTTAATTCATTTCTGATCAGATTTGAGATCTCACCTACATCAGACCTGGGGATGCCAGAGATACCTTCAGGAGAGAGTGGAGCAGGCT-GGGTCATCCCTGGGCACAGTCATAATACCTCTTGCTCACTCCCACCATGGTGGT-------CA-GCGCCAGCCCCCACCC-----------------AG------------TCATCTGTGCTAACGAGGCC---AGCACCTCTGCCAGTCCCGCCTCAATTTATTAGAAATCAGGCACATCGCAGCCTTCTGCTGAC-CCCTTAGATCGCAGCAGAGCTTTGGGCCCCAGAGACCCCTTACTCTGCCAAGGGGCTTTTCCAACTGCTGGAATTGTTAACCCATTGTTAGTG-GATTTATTAACCCATTAGCAGGGAAGCGGCTG--CCTT-CTAACACCCCCTGGATGTATGAACTACCTGTG-CTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGAGCCTTTGT-TTCTCTTTCCTGACCCACATTGAAAGTGGAATCTTTGAGACCAACA-GCGTCAGCTCTCCCTGAGGGCAGAGAGACATGTGCAGGGAGGGGACTTGGAGGAAAGC--------------TAGGGGGACAC--AGAAAAGGTGGTCTGGGCAGGGAAAGGGAGACCTCAAATGGAATAGAGGGGAGAACTCAACTCTCCtgag-c-cctgctatgtgcca s panTro4.chr1 30450632 660 + 228333871 -CTTTAATTCATTTCTGATCAGATTTGAGATCTCACCTACATCAGACCTGGGGATGCCAGAGATACCTTCAGGAGAGAGTGGAGCAGGCT-GGGTCATCCCTGGGCACAGTCATAATACCTCTTGCTCACTCCTACCATGGTGGT-------CA-GCGCCAGCCCCCACCC-----------------AG------------TCATCTGTGCTAACGAGGCC---AGCACCTCTGCCAGTCCCTCCTCAGTTTATTAGAAATCAGGCACATCGCAGCCTTCTGCTGACTCCCTTAGATCACAGCAGAGCTTTGGGCCCCAGAGACCCCTTACTCTGCCAAGGGGCTTTTCCAACTGCTGGAATTGTTAACCCATTGTTAGTG-GATTTATTAACCCATTAGCAGGGAAGCGGCTG--CCTT-CTAACACCCCCTGGATGTATGAACTACCTGTG-CTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGAGCCTTTGT-TTCTCTTTCCTGACCCACATTGAAAGTGGAATCTTTGAGACCGACA-GCGTCAGCTCTCCCTGAGGGCAGAGAGACATGTGCAGGGAGGGGACTTGGAGGAAAGC--------------TAGGGGGACAC--AGAAAAGGTGGTCTGGGCAGGGAAAGGGAGACCTCAAATGGAATAGAGGGGAGAACTcaactctcctgag-c-cctgctatgtgcca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30038756 660 - 229942017 -CTTTAATTCATTTCTGATCAGATTTGAGATCTCACCTAGATCAGACCTGGGGATGCCAGAGATACCTTCAGGAGAGAGTGGAGCAGGCT-GGGTCATCCCTGGGCACAGTCACAATACCTCTCGCTCACTCCCACCGTAGTGGT-------CA-CTGCCAGCCCCCACCC-----------------AG------------TCATCTGTGCTAACGAGGCC---AGCACCTCTGCCAGTTCCTCCTCAATTTATTAGAAATCAGGCCTATCGCAGCCTTCTGCTGAC-CCCTCAGATCGCAGCAGAGCTTTGGGCCCCAGAGACCCCTTACTCTGCCAAAGGGCTTTTCCAACTGCTGGAATTGTTAACCCATTGTTAGTG-GATTTATTAACCCATTAGCAGGGAAGCGGCTG--CCTT-CTAACACCCCCTGGACGTATGAACTACCTGTGCCTGATGTCCTGGCACATGATGGCCAGGCCAGCCCTGGTGGTGGAGCCTTTGT-TTCTCTTTCCTGAACCACATTGAAAGTGGAATCTCTGAGACCGACA-GGGTCAGCTATCCCTGAGGGCAGAGAGACATGTGCAGGGAGGGGACTTGGAGGAAAGC--------------TAGGGGGACAC--AGAAAAGGTGGTCTGGGCAGGGAAAGGGAGACCTCAAATGGAATAGAGGGGAGAACTCAACTCTCCTGAT-C-CCTGCTATGTGCCA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 450383 594 - 28733288 -T-------------------GTCTTGGGGTCCCAACCTGAG-AGGCCCAGGTAGCCTGGAGTTCCCTTCA-GAGGGAGGGAAGC-------------------------------TGCCTCCTACCCAATCC--CCACAAGGATCCAACCCCA-GCCCTTGCCCCCGCCC-----------------AGTAAGACCCTGGCTCACCTGCCCTAACGAGACC---AG-----------GCTCCCTCCTTCCTTATTAGAAATCAGATAGGCTCAAGAATTTTGCTGAT-CCCTTAGATCATAATAGAAATTCAGGCCCCAGAGTCCCTTTACTCTGCCAAGAGCCCTTTCCA---------------------------------------AACTCATCAGGAGGGAAGTAGCTGGCCCCT-CTAACTATCCCTGGACACACGAAGCACCCGTTCCTGGCGTCCCGGCGTGCAGTGGGCAGGCCAGTCCTGCTCCTGGGCCCCCAGTGCTCTCTCTCCTGAACTGCAGTGAAGACGGAACCTGTGAGACCGGCAGGCTTCTGCTCTCCCTGAGGACAGACAGACATGTGTAGACAGGGGGCTTGAAGGAAAGCCTAGGGCAAGGAGTTGGGGGGACCT--GGAAGAAGTGGCCAGGGCAGGGAAAGGGAGACCTCAGATGAGCT--GGGGGAGAACTCAACTTTCCTGAGCC-CCTACTGTGTGTCA i nomLeu3.chr24 C 0 I 4 s rheMac3.chr1 33335908 641 + 229590362 -CTTTAATTCGTTTCTGATACGATTTGAGATCTCAGCTAGATCAGACCTGGGGATGCTGGAGATACCTTCAGGAG------------------GTCATCCCTGCACACAGTCACAATACCTCTCGCTCACTCCCACCGTGGTGGC-------CA-GCACCAGCCCCCACCC-----------------AG------------CCATCTGTGCAAACGAGGCC---AGCACCTCTGCCTGTCCCTCCTCAATGTATTAGAAATCAGGCACTTCGCAGCCTTTTGCTGAC-CCCTTAGATCGCAGCAGAATTTTGGGCCCCAGAGACCCCTTACTCTGCCCAGTGGCTTTTCCAGCTGCTGGAATTGTTAGCCCATTGTTAGTG-GATTTATGAACCCAC--GCAGGGAAGCGGATG--CCCT-CTAACACTCCCTGGACGTATGAACTACCTGTGCCTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGAGCCTTTGT-TTCTCTTTCCTGAATGACATTGAAAGTGGAATCCATGAGACCATCA-GGGTCAGCTCTCCCTGAGGGCAGAGAGATGTGTACAGGGAAGGGACTTGGAGGAAAGC--------------CAGGGGGACAC--AGAAAAGGTGGTCTGGGCGGGGAAAGGGAGACCTCCAATGGAATAGAGGGGAGAACTCAACTCTCCTGAG-C-CCTGCTGTGTGCCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29847048 641 - 227556264 -CTTTAATTCGTTTCTGATACGATTTGAGATCTCAGCTAGATCAGACCTGGGGATGCTGGAGATACCTTCAGGAG------------------GTCATCCCTGCACACAGTCACAATACCTCTCGCTCACTCCCACCGTGGTGGC-------CA-GCACCAGCCCCCACCC-----------------AG------------CCATCTGTGCAAACGAGGCC---AGCACCTCTGCCTGTCCCTCCTCAATGTATTAGAAATCAGGCACTTCGCAGCCTTTTGCTGAC-CCCTTAGATCGCAGCAGAACTTTGGGTCCCAGAGACCCCTTACTCTGCCCAGTGGCTTTTCCAACTGCTGGAATTGTTAGCCCATTGTTAGTG-GATTTATGAACCCAC--GCAGGGAAGCGGATG--CCCT-CTAACACTCCCTGGACGTATGAACTACCTGTGCCTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGAGCCTTTGT-TTCTCTTTCCTGAATGACATTGAAAGTGGAATCCATGAGACCATCA-GGGTCAGCTCTCCCTGAGGGCAGAGAGATGTGTACAGGGAAGGGACTTGGAGGAAAGC--------------CAGGGGGACAC--AGAAAAGGTGGTCTGGGCGGGGAAAGGGAGACCTCCAATGTAATAGAGGGGAGAACTCAACTCTCCTGAG-C-CCTGCTGTGTGCCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32613442 641 + 220367699 -CTTCAATTCGTTTCTGATACGATTTGAGATCTCACCTAGATCAGACCTGGGGATGCTAGAGATACCTTCAGGAG------------------GTCATCCCTGCGCACAGTCACAATACCTCTCGCTCACTCCCACCGTGGTGGT-------CA-GCACCAGCCCCCACCC-----------------AG------------TCATCTGTGCAAACGAGGCC---AGCACCTCTGCCAGTCCCTCCTCAATGTATTAGAAATTAGGCACTTCGCAGCCTTTTGCTGAC-CCCTTAGATCGCAGCAGAACTTTGGGCCCCAGAGACCCCTTACTCTGCCCAGTGGCTTTTCTAACTGCTGGAATTGTTAGCCCATTGTTAGTG-GATTTATGAACCCAC--GCAGGGAAGCGGATG--CCCT-CTAACACTCCCTGGACGTATGAACTACCTGTGCCTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGagcctttgt-ttctctttcctgaaTGACATTGAAAGTGGAATCCGTGAGACCAACA-GGGTCAGctctccctgagggcagagagaTGTGTACAGGGAAGGGACTTGGAGGAAAGC--------------CAGGGGGACAC--AGGAAAGGTGGTCTGGGCAGGGAAAGGGAGACCTCCAGTGGAATAGAGGGGAGAACTCAACTCTCCTGAG-C-CCTGCTGTGTGCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28128668 641 - 130588469 -CTTTAATTCGTTTCTGATACGATTTGAGATCTCACCTAGATCAGACCTGGGGAGGCTAGAGATACCTTCAGGAG------------------GTCATCCCTGCGCACAGTCACAATACCTCTCGCTCACTCCCACCGTGGTGGT-------TA-GCACCAGCCCCCACCC-----------------AG------------CCATCTGTGAAAACGAGGCC---AGCACCTCTGCCAGTCCCTCCTCAATGTATTAGAAATCAGGCACTTCGCAGCCTTTTGCTGAC-CCCTTAGATCGCAGCAGAACTTTGGGCCCCAGAGAACCCTTCCTCTGCCCAGTGGCTTTTCCAGCTGCTGGAATTGTTCGCCCATTGTTAGTG-GATTTATGAACCCAC--GCAGGGAAGCGGCTG--CCCT-CTAACACCCCCTGGATGTATGAACTACCTGTGCCTGATGTCCTGGCACACGATGGCCAGGCCAGCCCTGGCGGTGGAGCCTTTGT-TTCTCTTTCCTGAACCACATTGAAAGTGGAATCCGTGAGACCATCA-GGGTCAGCTCTCCCTGAGGGCAGAGAGATGTGTGCAGGGAAGGGACTTGGAGGAAAGC--------------CAGGGGGAGAC--AGAAAAGGTGGTCTGGGCAGGGAAAGGGAGACCTCCAATGGAATAGAGGGGAGAACTCAGCTCTCCTGAG-C-CCTGCTGTGTGCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64584222 667 + 155834243 -TTTTTATTTATTTCTGACCAGATCCGAAATCTCACCTAGATCAGACCTGGGGATGCCAGAGAAACCTTCAGGAGAGGGTGGAGCAGGCTGGGGTCATCCCTGGGCACAGTCACAATACCTCTCGCTCACTCCCACCCTGGTGGG-----GGCG-GTGCCAGCCCCCACCC-----------------AG------------TCATCTGTGCTAACGGTGACATTAGCACCACTGACAGTTCCTCCCCATTTTGAGAGAAATCAGGCACATCGCAGCCTTCCGCTGAC-CCCTTAGTTCTCAGCAGAACTTTGGGACCCAGAGGCCCCTTAGTCTGCCAAGGGGCTTTTCCAGCTGCTGGAACTGTTCATCCATTGTTAAAATTGTTTGTTAACCCATTAGTGGGGAAGTGGGTG--CCCT-CTAACACTCCGTGGACGTATGAACTGCCTGTGCCTGAGGTCCTGGCACATGATGGCCAGGCCAGCTCTG-CCGTGGAGACTTTGTGTTCTCTTTCCTGAACCACAGAAAATGTGGAATCTGTGAGACTGACG-GGGTCAGCTCTCCCTGAGGGCAGAGAGACACGTGTGGGGAGGGGACTTGAAGGAAAGC--------------CAGGGGGACAC--AGAAAAGGTGGTCTGGGCAGGGAAAGGGGGACCTCAAATGGAATAGAAGGAGAAACTCAACTCTCCTGGG-T-cctgctgtgtgcca i calJac3.chr7 I 36 C 0 s canFam3.chr2 14974327 613 - 85426708 GGTTGTTTTTATTTCTA-----------------------ATCAGATTTGGGGATGCTGGAGATGACTTCAGGAGAGATTGGAGCTGGTT---AGAGTCCCTGGGTCTAGTCACAATGCTTCCCACTCATCCTCAGCCTGGTGGT-------CAGGCTCCAGCCCCCACCCCAGCCCCATCAGACCCAGG------------TCAACCAAACTAACTAGGCC---AGTGCCTCC-CCAGACCCTCATTGCTTTATTAGAAATTAGATGCACAAAAGAATTCTGCTGAC-CCCT-GGATTGGAGCAGAACTTTGGGTCCCTGAGGCTCCTTTCTCTACCAAGGACCTTTTCCAGAGGCAA------------------------GATTTGTTGACTCATTAGCAGGGAAGGAGCCA--CACTGCTAACAATCCCTAGGCTTATGAACCATCTGTGCCTGGCTCCCTGGCACACA---GCCCAGTCAGTCCTGTCAATGGGGTCTCCTCATTCTCTTTCCTGAGCTGCAGAGA----------TGTG-GATTGATG-GGGTCTGCTCTCTCTGAAGGCAGTCAG----GTGCAGG---GGGACTTGGAGGAAATC--------------TAGGGGGAGACCTGAAAGAGGTGATCTGGATAGGGAAAGGGAGACCTCAAATGGGCTACAGGGAAGAATTcaactttcctgag-cacctactatgtgcca i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=327731.000000 s hg38.chr1_KI270760v1_alt 19796 125 + 109528 gaaatttatataca-ttcctcgtccaagcctcatcacctcggtagaaa---gctgtcactcatcctattatgggactttgccaagtgagcagatgaggaagtggaggcctggagaggtcaagtgacctg s panTro4.chr1 30451292 125 + 228333871 gaaatttatataca-ttcctcgtccaagcctcatcacctcggtaggca---gctgtcactcattctattatgggactttgccaagttagcagatgaggaagtgcaggcctggagaggtcaagtgacctg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30039416 125 - 229942017 GAAAtttatataca-ttcctcgtccaagcctcatcacctcggtaggca---gctgtcactcatcctattatgggactttgcccagttaacagatgaggaagtggaggcctggagaggtcaagtgacctg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33336549 125 + 229590362 GAAATTCATATACA-TTCCTCGTCCAAGCCTCATCACCTCGGTCGGCA---GCTGTCACTCATCCCATTATGGGattttgcccagttagtagatgaggaagtggaggcctggagaggtcaagtgacctg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29847689 125 - 227556264 GAAATTCATATACA-TTCCTCGTCCAAGCCTCATCACCTCGGTCGGCA---GCTGTCACTCATCCCATTATGGGattttgcccagttagtagatgaggaagtggaggcctggagaggtcaagtgacctg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32614083 110 + 220367699 GAAATTCATATACA-TTCCTCGTCCAAGCCTCATCACCTCGGTCGGCA---GCTGTCACTCATCCCATTATGGGATTTTGCCCAGTTAGTAGATGAGGAAGTGGAGGCCTGGAG--------------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28129309 125 - 130588469 GAAATTCATATACA-TTCCTCGTCCAAGCCTCATCACCTCGGTCGGCA---GCTGTCACTCATCCCATTATGGGattttgcccagttagtagatgaggaagtggaggcctggagaggtcaagtgacctg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64584889 125 + 155834243 gatacttacataca-ttcctcgtccaagccttgtcaccttggtaagca---gctgttactcaccctactatgggattttgcccagttggcagatgaggaagtggaggcctggagaggtcaagtgacctg i calJac3.chr7 C 0 C 0 s canFam3.chr2 14974940 129 - 85426708 ggcacttatatacaccccctcacccaagccttatcactttgggaagcagatgttgtcaccaaccctactgtgtgattatgcccatcttgtagatgagaaaatcaaggcccacacaagttaaatgacctg i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 450977 4 - 28733288 I a score=3779482.000000 s hg38.chr1_KI270760v1_alt 19921 1277 + 109528 cccaaggtcacacaccgtggctatcacaaagcagggattcaaatccaggcccctgatgagccctaagtccatctt----cttcctcccaaccaccctgtcTAGA--CACTTTTCACTTCATGGGAGTCCTCATGGCTCCTTCCACTTTGGCTGACCTCACCCCAAAACT-CCCACAAAGCCACCAGGCAGTTCCCTGGTAAAGAGAAGCCTCAAGAAGTCCCTGCCTTCAAGGGGGAGGGCCTGGAAGATCCCTCCTGAGAAGCAAACGTTTTCCAGCAGAGCAAATCACTGAGACCTCTTAGTAATCGCAGGTGCTGACGGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTACACCTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGCAGGGGTGACACGCAGGGAGAGGAGCAGCTGCCCAAGCTGGGCCCTGGGGGGCTTCAGGGATGAAGGTGA-GGGCACAGTGTGGCTGCTGAGGGACCACTGCTTCCACTTGCTGCCCCAGGGGATTGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCAATATCTGCCAGTCCCAATTGACCAGCCCAATCAATTTCACCCTGGCCCAGTGCCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGA-GCTGGAGAAGAGGCTTGGAGTCTTCAGCAGCTCTGAGCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGAGCTGACAGTAGCAGAGGACAGGACAAGATGCGGGTGCCcagcatgggccctggg----------------------------------ctcagcaccctgggctaggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgacgttgggcaagtcacatggcctctctgggcctcagctgcctcatctgcaaagt-gagg---------C-ACTCTTT-TGCAGGGACATCAAAGAGGCAAGACCTGGTTGGGAAGAGCAGCCAGGAACACAG--GGG-----------------------CAGAACCT--------GGCCCTGCTTCACCTTCCTCCTCTGCCCCCATCCTCCTGGTGACTGGCCAGATCCTGGTGTCCCCACCCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAAGCTGCTTCCT-TCCCTCCTCCTCTTTCTCCCCAAGGCCACCATCACCAGGGCTTCCCACAGGCTGACTGGAGTTTCCCGGGTCGGGGCTGAGCCTT-GTAAAACATTTGACTTCTCATCTGCACGCACAGCAGCTCAGCTGTTTC-CCCAGGGATCCATGCTGTCCCCCAGCCCTGTTTTGGTCC s panTro4.chr1 30451417 1290 + 228333871 cccaaggtcacacagcttggctgtcacaaagcagggattcaaatccaggcccctgatgagccctaagtccatctt----ctttctcccaaccaccctgtctAGA--CACTTTTCACTTCATGGGAGTCCTCATGGCTCCTTCCACTTTGGCTGACCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGTTCCCTGGTAAAGAGAAGCCTCAAGAAGTCCCTGCCTTCAAGGCGGAGGGCCTGGAAGATCCCTCCTGAGAAGCAAATGTTTTCCAGCAGAGTAAATCACTGAGACCTCTTAGTAATCGCAGGTGCTGACGGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTACACCTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGCAGAGGAGACACGCAGGGAGAGGAGCAGCTGCCCAAGGTGGGCCCTGGGGGGCTTCAGGGATGAAGGTGAGGGGCACAGTGTGGCCACTGAGGGACCACTGCTTCCACTTGCTGCCCCAGGGCATTGATCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCAATATCTGCCAGTCCCAATTGACCAGCCCAATCAATTTCACCCTGGCCCAGTGCCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAAGAGGCTTGGAGACTTCAGCAGCTCTGAGCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGAGCTGACAGTAGCAGAGGACAGGACAGGATGTGGGTGCCcagcatgggccctggg----------------------------------ctcagcaccctgggctaggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgacattgggcaagtcacatggcctctctgggcctcagctgcctcatctgcaaagtggaggtgactattcc-ACTCTTGATGCAGGGACATCAAAGAGGCAAGACCTGGTTGGGAAGAGCAGCCAGGAACACAG--GGG-----------------------CAGAACCT--------GGCCCTGCTTCACCCTCCTCCTCTGCCCCCATCCTCCTGGTGACTGGCCAGATCCTGGTGTCCCCACCCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAGGCTGCTTCCT-TCCCTCCTCCTCTTTCTCCCCAAGGCCACCATCACCAGAGCTTCCCACAGGCCGACTGGAGTTTCCCGGGTGGGGGCTGAGCCTT-GTAAAACATTTGACTTCTCATCTGCGTGCACAGCAGCTCAGCTGTTTC-CCCAGGGATCCATGCTGTTCCCCAGCCCTGTCCTGGTCC i panTro4.chr1 C 0 M 525 s ponAbe2.chr1 30039541 1275 - 229942017 cccaaggtcacacagcttggctgtcacaaagcagggattcaaatccaggcccctgatgagccctaagtccatctt----cttcctcccaaccaccctgtctAGA--CACTTTCCACTTCATGGGAGTCCTCATGGCTCCTTCCACTTTGGTTGCCCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGCTCCCTGGGAAAGAGAAGCCTTAGGAAGTCCCTGTCTTCAAGGAGGAGGGCCTGGAAGATCCCTCCTGAGAGGCAAACATTTTCCAGCAGAGTAAATCACTGAGACCTCTTAGTAATCGCAGGTGCTGACGGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTAGACCTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGTAGGGCAGACACACA-GAAGAGGAGCAGCTGCCCAAGCCAGGCCTTGGGGGGCTTCATGGATGAAGGTGAGGGGCACAGTGTGGCTGCTGAGGGACCACTGCTCCCACTTGCTGCCCCAGGAGATTGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCAACATCTGCCAGTCCCAATTGACCAGCCCAATCAATTTAACCCTGGCCCAGTGTCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAAGAGGCTTGGAGTCTTCAGCAGCTCTGAGCTAAGCCCTGGGCA------GAGCATTTGGTG-GGGCAGAGGGAGCTGACAGTAGCAGAGGACAGGACAGGGTGTGGGTGCCCAGCAGGGGCCCTGGG----------------------------------CTCagcaccctgggctgggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgacgttgggcaagtcacatggcctctctgggcctcagctgcctcatctgcaaagtgcagacgattattcc-actcttgatgcagggACATCAAAGAGGC---TCCTGGTTGGGAAGAGCAGCCAGGAGCACGG--GGG-----------------------CAGAGCCT--------GCCTCTGCTCCACCCTCCTCCTCTGCTCCCATCCTCCTGATGACTGGCCAGATCCTAGTGTCCCCACCCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAGGCTGCTTCCC-TCCCTCCTCCTCTTTCT-----------CCATCACCAGGGCTTCCCACAGGCTGGCTGGAGTTTCCCGGGTGGGGGCTGAGCCTT-GTAAAACATTTGACTTCTCATCTGCGTGCACAGCAGCTCAGCTGTCTC-CCCCGGGATCCATGCTGCTCCCCAGCCCTGTCTTGGTCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 450981 1245 - 28733288 CCCAGGGTCACACGGCCTGGCCGCGGTGGGGCAGGAA-TCAGTCCTAGGCCTCCAGTGACACTGAAGTTTATCCT----GTTCATCCCGACCACACCGTCTACATTTGCCCTTTACTGCATGTGAATCCCCATGGCTCCTTCCACTTTGGTTGTACCCTCACCCCAGCC-CCCACAAAGCCACCATGCAGCTCCCTGGGAAACAGAAGCCTCAGTAAATCCCAG-CTTCAAGGAGGAGGGCCTGGCTGATCCCTCCTGAGAGACAGACATTTCCTGGCAGAATAAATCACCTCGGCCTCTCAG---CTGCGGGTACAGCCAGCCACCCTCCTTCCCCCGAAGGTTTATAAATCAAACCTTAGACCTTGACTCA----GAATCTGCTGGGGAATAAATAAGGCCGGAAGCAGGGGGGACATGCAGGGAGAAGAGCAGCTCCCCAACCCAGGCCCTGGAGGGCTTCTGGGATGGAGGTGAGGGGCACAGCGTGGCCACTGAGAGGCCACTGCTCCCACCTGCCGCTCCAGAGGATTGGGCCAGTGGCTTCGT-GGGGTCCCTGCCAGCCCCAGCAT--------------------------TCTGTGTCTCCCTGAACCAGTGTCTGGGAACAGCTGGGGAAAGGAGTCTGGGCTCAGGGATGGAGGCTGGAGAGGGGACTTGGAGTCCCCAGCAGCTCTGAACTAAGCTCTGGCTG------GGGCGTTTGGTG-GAGCAGAGGGGGCTGGTGGTAGCAGAGGACAGGGCAGTGTGGGGGAGCCCACCACAGGCCCTGGGCCAGGGCAGCCAGAAGGAAGCcagagaggcagaactcagcaccctgggctgggagtcagg-----gcctggtc------agttctgggtctgctgcagacttgccgtgtgaccttgagcaag------GACCTACT-----------------------------GAGG-----------------------------TCAGGGAGGGAAGAGCCAGTTGGGAAGAGGAGCCAAGAGCACAG--GGATGGGACTTGGCTGCTGACCTGGTCAGGGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCCAGCCTCCCGGTGACTGGCCAGGCCCTGGTGTCCCTGCCCCTGAAAGCCCAGTTTATGGGCAGAGGTGAGGCCTTTATGCAAATGAAGCTGCCCCCC-TCTCTCCTCCCCCTTTTCCCCAAGGCCACCGTCACTGGGGCCTCCCA---GATGGCTTCAGTTTCCCAGGTGGGGGCTGAGTCTT-GTAAAGCATTTGACTTCTCATCTGGGGGCACGGCAGCTCGGCTGTCTC-TCCCAGGGTCCATGCTGCTCCCCAGTCCTGTCCTGGTCC i nomLeu3.chr24 I 4 C 0 s rheMac3.chr1 33336674 1291 + 229590362 cccaaggtcacaaagcttggctgtcacaaagcagggtttcaaatccaggcccctgatgagccctaagtccatcttcttccttcctcccaaccaccctgtctAGACTTACTTTTCGTTTCAGGGGAGTACCCATGGCGCCTTCCACTTTGGTTGCCCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGCTCCCTGGGAAAGGGAAGCCTCAGGAAGTCCCTGCCT--AAGGGAGAGAGCCTGGAAGATTCCTCCTGAGAAGCAAACATTTTCCAGCCGAGGAAATCACTGAGACCTCTTAGTAATCGCAGGTGCCGCCAGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTAGAACTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGCAGGGGAGACACGCAGGGAGAGGAGCAGCTGCCCAAGCCAGGCCCTGCGGGGCTTCAGGGATGGAGGTGAGGGGCACAGTGTAGCCTCTGAGGGACCACTGCTCCCACTTGCCGCCCTAGGGGGTGGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCCACATCTGCCAGCCCCAGTTGACCAGCCCAATCAATTTAACCCTGGCCCAGTGTCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAGGAGGCTTGGAGGCTTCAGCAGCTCTGAGCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGGGCTGACAGTAGCAGAGGACAGGACAGGGTGTGAGTGCCCAGCAGGGGCCCTGGG----------------------------------CTCagcaccctgggctgggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgatgttgggcaagttacgtggcctctctgggcctcagctgcctcatctgcaaagtggagatgattattcc-gctctCTATGCAGGGACATCAAAGAGGCAAGACCTGGTTGGGAAGCGCAGCCAGAAGCACAG--GGG-----------------------CAGAGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCCAGCCTCCTGGTGACTGGCCAGGTCCTGGTGTCCCCACTCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAGGCTGCTTCCC-TCCCTCCTCCTCTTTCTCCCCAAGGTCACCATCACCAGGGCTTCCCACAGGCTGGCTGGAGTTTCCCGGGTGGGGGCTGAGCCTT-GTAAAACATTTGATTTCTCATCTGCATGCACAGTAGCTCGGCTGTCTC-CCGCAGGATCCATGCTGCTCCCCAGCCCTGTCCTGGTCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29847814 1291 - 227556264 cccaaggtcacacagcttggctgtcacaaagcagggtttcaaatccaggcccctgatgagccctaagtccatcttcttccttcctcccaaccaccctgtctAGACTTACTTTTCGTTTCAGGGGAGTACCCATGGCGCCTTCCACTTTGGTTGCCCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGCTCCCTGGGAAAGGGAAGCCTCAGGAAGTCCCTGCCT--AAGGGAGAGAGCCTGGAAGATTCCTCCTGAGAAGCAAACATTTTCCAGCCGAGGAAATCACTGAGACCTCTTAGTAATCGCAGGTGCCGCCAGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTAGAACTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGCAGGGGAGACACGCAGGGAGAGGAGCAGCTGCCCAAGCCAGGCCCTGCGGGGCTTCAGGGATGGAGGTGAGGGGCACAGTGTAGCCGCTGAGGGACCACTGCTCCCACTTGCCGCCCTAGGGGGTGGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCCACATCTGCCAGCCCCAGTTGACCAGCCCAATCAATTTAACCCTGGCCCAGTGTCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAGGAGGCTTGGAGGCTTCAGCAGCTCTGAGCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGGGCTGACAGTAGCAGAGGACAGGACAGGGTGTGAGTGCCCAGCAGGGGCCCTGGG----------------------------------CTCagcaccctgggctgggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgatgttgggcaagttacgtggcctctctgggcctcagctgcctcatctgcaaagtggagatgattattcc-gctctCTATGCAGGGACATCAAAGAGGCAAGACCTGGTTGGGAAGCGCAGCCAGAAGCACAG--GGG-----------------------CAGAGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCCAGCCTCCTGGTGACTGGCCAGGTCCTGGTGTCCCCACTCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAGGCTGCTTCCC-TCCCTCCTCCTCTTTCTCCCCAAGGTCACCATCACCAGGGCTTCCCACAGGCTGGCTGGAGTTTCCCAGGTGGGGGCTGAGCCTT-GTAAAACATTTGATTTCTCATCTGCATGCACAGTAGCTCGGCTGTCTC-CCCCAGGATCCATGCTGCTCCCCAGCCCTGTCCTGGTCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32614193 1289 + 220367699 ----AGGTCACACAGCTTGGCTGTCACAAAGCAGGGTTTCAAATCCAGCCCCCTGATGAGCCCTAAGTccatcttcttccttcctcccaacCACCCTATCTAGACTTACTTTTCGTTTCAGGGGAGTACCCATTGCGCCTTCCACTTTGGTTGCCCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGCTCCCTGGGaaagggaagcctcaggaagtccctgccttcaagggAGAGAGCCTGGAAGATTCCTCCTGAGAAGCAAACATTTTCCAGCCAAGGAAATCACTGAGACCTCTTAGTAATCGCAGGTGCCGCCAGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTAGAACTGGATTCACA-TAACTCTGTCAGGGGATAAGTAAGGCAGGAAGCAGGGGAGACACGCAGGGAGAGGAGCAGCTGCCCACGCCAGGCCCTGCGGGGCTTCAGGGATGGAGGTGAGGGGCACAGTGTAGCCGCCGAGGGACCACTGCTCCCACTTGCCGCCCCAGGGGGTGGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCCACATCTGCCAGCCCCAGTTGACCAGCCCAATCAATGTAACCCTGGCCCAGTGTCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAGGAGGCTTGGAGGCTTCAGCAGCTCTGACCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGGGCTGACAGTAGCAGAGGACAGGACAGGGTGTGGGTGCCCAGCAGGGGCCCTGGG----------------------------------CTCAGCACCCTGGGCTGGGAGTCCAG-----GCCTGGTC------AGTTCTGGGTCTGCTGTGGACTtgctgtgtgatgttgggcaagtcacatggcctctctgggcctcagctgcctcatctgcaaagtggagaCGATTATTCC-GCTCTCTATGCAGGGACATCAAAGAGGCACGACCTGGTTGGGAAGAGCAGCCAGAAGCACAG--GGG-----------------------CAGAGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCCAGCCTCCTGGTGACTGGCCAGGTCCTGGTATCCCCACCCATGAAAGCCCAGTTGATTGGCAGAGGTGAGGCCTTTGTGCAAATGAggctgcttccc-tccctcctcctctttctccccaaGGTCACCATCACCAGGGCTTCCCACAGGCTGGCTGGAGTTTCCCAGGTGGGGGCTGAGCCTT-GTAAAACTTTTGATTTCTCATCTGCATGCACAGTAGCTCGGCTGTCTC-CCGCAGGATCCATGCTGCTCCCCAGCCCTGTCCTGGTCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28129434 1289 - 130588469 cccaaggtcacacagcttggctgtcacaaagcagggtttcaaatccaggcccctgatgagccctaagtccatcttcttccttcctcccaaccaccctgtctAGACTTACTTTTCATTTCAGGGGAGTACCCATGGCTCCTTCCACTTTGGTTGCCCCCACCCCAAAACT-CCCACAAAGCCACCAGGCAGCTCCCTGGGAAAGGGAAGCCTCAGGAAGTCCCTGCCT--AAGAGAGAGAGCCTGGAAGATTCCTCCTGAGAAGCAAACATTTTCCAGCCGAGGAAATCACTGAGACCTCTTAGTAATCGCAGGTGCCGCCAGCTGCCCTCCTTCCCCTGGAGGTTTGTAAATCAAACCTTAGAACTGGATTCACA-TAACTCTGTCA-GGGATAAGTAAGGCAGGAAGCAGGGGAGACACGCAGGTAGAGGAGCAGCTGCCCAAGCCAGGCCCTGCGGGGCTTCAGGAATGGAGGTGAGGGGCACAGTGTGGCCGCTGAGGGACCACTGCTCTCACTTGCCGCCCCAGGGGGTGGAGCCAGGGGCTTCCTGGGGGTCCCTGCCAGCACCCACATCTGCCAGCCCCAGTTGACCAGCCCAATCAATGTAACCCTGACCCAGTGTCTAGGGACAGTTGGGGCAAAGGGTCTGGGCTCAGGGGTGGAGGCTGGAGAGGAGGCTTGGAGGCTTCAGCAGCTCTGAGCTAAGCCCTGGGTA------GAGCATTTGGTG-GGGCAGAGGGGGCTGACAGTAGCAGAGGACAGGACAGGGTGTGGCTGCCCAGCAGGGGCCCTGGG----------------------------------CTCagcaccctgggctgggagtccag-----gcctggtc------agttctgggtctgctgtggacttgctgtgtgatgttgggcaagtcacatggcctctctgggcctcagctgcctcatctgcaaagtggagacgattattcc-gctctCTATGCAGGGACATCAAAGAGGCAAGACCTGGTTAGGAAGAGCAGCCAGAAGCACAG--GGG-----------------------CAGAGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCCAGCCTCCTGGTGACTGGCCAGGTCCTGGTGT-CCCACCCATGAAAGCCCAGTTGATTGGCAGAGGTGACGCCTTTGTGCAAATGAGGCTGCTTCCC-TCCCTCCTCCTCTTTCTCCCCAAGGTCACCATCACCGGGGCTTCCCACAGGCTGGCTGGAGTTTCCCAGGTGGGGGCTGAGCCTC-GTAAAACATTTGATTTCTCATCTGCGTGCACAGCAGCTCGGCTGTCTC-CCCCAGGATCCATGCTGCTCCCCAGCCCGGTCCTGGTCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64585014 1255 + 155834243 cccaaggtcacacagcttggctgtcacaaagcagggattcacatccaggctcctgatgagccctaaatccatctt----cttcctcccaaccaccctgtctAGACTCACTTTTCACTTCGCGGAGGTCCCCACAGCTCCCTCCACTTTGGTTGCCCCAACCCCAAAACTCCCCACAAAGCCACCAGGCAGCTCCCTGGGAAAGGGAAGCCTCAGGAAGTCCCTGCTGTCAAG---GAGGGCCTGGAGGAT-CCTCCCGAGAAGCAAACATTTTCCAGCAGAGTGAATCACTGAAACCTCTTGGTAATCACAGGTGCTGATGTCTGCCCTCCTTCCCCTGGAGGTTTGTACATTAAACCTTAGACCTGGCTTCACATTGAGTCTGTCAGGGGATAAGTAAAGCAGGAAGCAGGGGAGACATGCAGGGAGAGGACCAGCTACCCAAGCCGGGCCTTG-GGGACCTCTGGGATGGAGGTGAGGGGCACAGTGTGACTGCTGAGGGACCACTGTTCCCACGTGCTGTC-------------CCAGGGGCTTCCT-GGGGTTCCTGCCAGCCCCAACATCTGCCAGCTGCAATTGATCAG--------------CCCTGG-TCAGTATGTAGGGACAG-TGGGGCAAAGGGTCTGGGCTGGGGGGTGGAGACTGGAGAAGGGGCTTGGAGTGTTGAGCAGCTCTGAGCTAAGCCATGAGTA------AAGTATTTGGTG-GGGCAGAGGGGGCTGGCAGTAGCAGAGGACAGGACAGGGTGTGGGTGCCCAGCAGGGGCCCTGGGCCAGGGCAGGA-----------------------CTCagcaccctgggctgggagtccag-----gcctggtc------agttctgggtctgccatggacttgctgcgagatcttgggcaagtcacatggcctctctgg---------gcctcatctgcaaagtggagatgattattcctgccctTGATACGGGGACATCAAAGAGGCAAGACCTGGTTGGGAAGAGCAGCCAGAAGCAGAG--GGG-----------------------CGAGGCCT--------GGCCCTGCTCCAC---CCTCCTCTGCCCCAAGCCTCCTGGTGACTGGCCAGGCCCTGGTGTCCCCACCCCTGAAAGCCCAGTTGATTGGGAGAGGTGAGGCCTTTCTGCAAATAAGGCTGCTTCCCTTCCCTCCTCCCTCTTCTCCCCAAGGCCACCATCACCGCAGCCTCCCGCA---TGGCTGGAGTTTCCCGGGT-GGGGCTGAGCCTT-GTAAAATGTTAGATTTCTCATCTGCGTGCACTGCAGCTCTGGGGTCTC-TCCCAGGGTCCATGTTGCT-CCCAGCCTGATCCTGGTCC i calJac3.chr7 C 0 C 0 s canFam3.chr2 14975069 1176 - 85426708 cccaaggtcacacagtgtgtctgtggtggagcaaggactcaaagc-------cctgtgacccctaagtctatctt----cttccccccaaccacactgtctatgctCGCTCTTCACCGCATGGGC-CCCCCTCGGCTCCTCTGCCTCTGTT---------------ACC-TCACCAAAGCCACCTGGCCACCTCCCAGGAGAGGGAAGCCTT-GTAACTCCCAGCCTTCAGTGGGGACGGGCCATGAGATCCCTCCCGAGAAGCAAACATTTCCCGGCAGAGTAAATCAT-----------------------------CAGCCGCCCTCCCTCCCA-GCAAGTCTGTAAATCAAACCTCAGACCTGGACTTTGC-AGCATCTGCTCTGGG--AAGTGAGGCAGGAAGCAGAGGAGAGATGCAGGGAGAAGGGCAGA-GCCCCGGTCAGGCCCTG-GGGGCTTCTGGGATGGAGGGGAGGCGCACAGCACGGCCAGGGAGGGACCAC--CCCCCACCTGCACCCCCAGGGGGACGGGCCA--GACTTCCC-GGGGCCCCTGCCAGCCCCGACAT--------------------------TCTGTGTGTCCCTGACCCCACGGC-GGGGGCAGCGGGAGCAAAGGGTCTGGGCTCAGGGGT-GAGGCTGGGCAGGGGGCTTAGGGTCAGCGGCGTCTCCGAGCTAAGCCCTGGGGGCGGGGTGGGTAGGCAGTGAGGGGGGGGGGAGCCCCTGGCCCCAAAGCACAGGCTGCGGTCGGGGTGTCC-GCA-GGGCCCTGGG----------------------------------C-CAGGGCAGCAGGAGGGAAGCCAGGGGGGCGCTCGGccgggctgggctccggctctgcggt-gaccggccgcgtgacctcggggaagccaggtggccgctctgggcctcggctgccccCCCCAC-------AGGTGGCCACCCCCGCCCCGGGCGCCGG-------------------CTG--CGGCGAGGACTGCAGGAGGCCCAGGAGGG-----------------------AAGGGCCCTCGGGGAGGTCCCTGCGCCCC---CGGCCTCCGCCCC-GGCCTCCTGGTGATTGGTCAG-CCCTGGCGGCCCCGCCCCCGAGGGCCCAGCTGATTGGCGGAGGCGGAGCCTTTATGCAAAGCAGGCCGCTCCCT-CCCCGCCCCC--------CCCCAGGCCACCACCCCTGGGGCCTTCT-CGGGCTGGCTGGTGGCCCCAGGA--GTGGCCGCGCCCCGGTAAAGCACTGGCTTCGTTGTCTAAGTGCAGGACCCCTCTGCTGTGTCTCCCCGGGACCCCTGCTGCTCCCT--CCCCGCCC------ i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=180974.000000 s hg38.chr1_KI270760v1_alt 21198 102 + 109528 TCGTGCCCCCTGGAAGAGCAGCCctcggcttcctctttctggccagttatgtgactttgggtgggtcccttcac---ctctgagcctcagtctcctcccgtgtta s ponAbe2.chr1 30040816 102 - 229942017 TTGTGCCccttggaagagcagccctcggcttcctctttctgaccagctgtgtgactttgggtgggtcccttcac---ctctgagcctcagtctcctcctgtgtta i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 452226 93 - 28733288 TTGTGCCCCTTGGAAGAGCAGCCCTCAGCTTCCTCTTTctgaccagttatgtgacttcaggtgggtcccttcac---ctctgag---------cctcctgcatta i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33337965 94 + 229590362 TTGTGCCCCTTGGAAGAGCAGCCCTCAGCTTCCTCTTTctg--------tgtgactttcgatgggttcctttac---ctctgaacctcagtctcctcctgtgtta i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849105 94 - 227556264 TTGTGCCCCCTGGAAGAGCAGCCCTCAGCTTCCTCTTTctg--------tgtgactttcgatgggttcctttac---ctctgaacctcagtctcctcctgtgtta i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32615482 93 + 220367699 TTGTGCCCCC-GGAAGAGCAGCCCTCAGCTTCCTCTTTCTG--------TGTGACTTTCGATGGGTTCCTTTAC---CTCTGAACGTCAGTCTCCTCCTGTGTTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28130723 94 - 130588469 TTGTGCCCCCTGGAAGAGCAGCCCTCGGCTTCCTCTTTctg--------tgtgactttcgatgggttcctttac---ctctgaacctcagtctcctcctgtgtta i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586269 101 + 155834243 TTGTGCCCCT-GGAAGAGCAGCCTTCGGCTTCCCCTTTctgaccagctgtgtgactttgggcaggtcccttcacgaactctgagattcagt---ctgctgtgtta i calJac3.chr7 C 0 C 0 s canFam3.chr2 14976245 65 - 85426708 CCACGACCCC-----------CCTCCTATCCTGACCTCCTCACCAGCC-TGTGACCTTGGGCAAGTCCC-TCAT---GTCA------------------------ i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e panTro4.chr1 30452707 525 + 228333871 M a score=385988.000000 s hg38.chr1_KI270760v1_alt 21300 184 + 109528 aatgggaataaaagcgcctacctcatggatgtgtcctgtttacttacacattcttgtaatcctccaagaaatattgaatatttcctgcgcatctcctgtgtgccaggccctggtctgtgtg-tgaggacggttatggaggtgggcagtggagacggggccctgccctggtggggctcCCTCGGGG s ponAbe2.chr1 30040918 185 - 229942017 aatgggaataaaagtgcctacctcatgcgtttgtCCTATTTACTTACACATTCTTGTAATCCTCCAAGAAATATTGaatatttcctgggtgtctcctgtgtgccaggccctggtctgcatgctgaggacaggtatggaggtgggcagtggagacagggccctgccctcgtggggctccctcaggg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 452319 169 - 28733288 gatgtggataagacagccgacc---tGGATTTGTCTTGTTTATTTACACATTCTTGGAAtcctccaacaaatattga-------------ggctcctgtgtgccagtccctggtctgggcactggggacaggtgtggaggtgggcagtggagacagggccctgctctcttggggctcCCTTGGGC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33338059 185 + 229590362 aatggggataaaagcacctacctcatggatttgtCCTGTTTACTCACACATTCTTGTAATCCTCCAAGAAATATTGaatatttcctgggcgtctcctgtgtgccaggccctggtctgggtgctgaggacagggatggaggtggtcagtggagacggggccctgccctcacggggctcCCTCGGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849199 185 - 227556264 aatggggacaaaagcacctacctcatggatttgtCCTGTTTACTCACACATTCTTGTAATCCTCCAAGAAATATTGaatatttcctgggcgtcgcctatgtgccaggctctggtctgggtgctgaggacagggatggaggtggtcagtggagacggggccctgccctcacggggctcCTTCGGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32615575 185 + 220367699 AATGGGGATAAAAGCACCTACCTCATGGATTTGTCCTGTTTACTCACACATTCATGTAATCCTCCGAGAAATATTGAATATTTCCTGGGCgtctcctgtgtgccaggccctggtcTGGATGCTGAGGACAGGGATGGAGGTGGTCAGTGGAGATGGGGCCCTGCCCTCGCGGGGCTCCCTCGGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28130817 185 - 130588469 aatggggataaaagcacttacctcatgggtttgtCCTGTTTACTCACACATTCTTGTAATCCTCCGAGAAATATTGaatatttcctgggcgtctcctgtgtgccaggccctggtctgggtgctgaggacagggatggaggtggtcagtggagacagggccctgccctcgtggggctcCCTCGGGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586370 185 + 155834243 gatgggaataagaccaccttcctcatggatttgtCCTGCTTATTTACACATTCTTGTAAtcctccaacaaatattgaatatttcctgggaggctcctgtgtgccaggccctggtctgagggatgaggacagttgtggaggtgggcagtggagtcagggccttgccctcatggggctccctcaggg i calJac3.chr7 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e canFam3.chr2 14976310 0 - 85426708 C e panTro4.chr1 30452707 525 + 228333871 M a score=63769.000000 s hg38.chr1_KI270760v1_alt 21484 23 + 109528 TGAGTGGCAGGTGCCTGTAGCAG s panTro4.chr1 30453232 23 + 228333871 TGAGTGGCAGGTGCCTGTAGCAG i panTro4.chr1 M 525 C 0 s ponAbe2.chr1 30041103 23 - 229942017 tgagtggcagGTGCCTGTAGCAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 452488 23 - 28733288 TGGGTGTCAGGTGGCTACAGCAG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33338244 23 + 229590362 TGAGTGGCAGCAGCCTGTAGCAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849384 23 - 227556264 TGAGTGGCAGCAGCCTGTAGCAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32615760 23 + 220367699 TgagtggcagctgcctgtagcAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131002 23 - 130588469 TGAGTGGCAGTGGCCTGTAGCAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586555 23 + 155834243 tgagtggcagGTGCCTGCAGCAG i calJac3.chr7 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e canFam3.chr2 14976310 0 - 85426708 C a score=1196160.000000 s hg38.chr1_KI270760v1_alt 21507 380 + 109528 GGAGC-TGGCTGGGAAGTTGTTTGTCAGTGGCCAAGAGCCACACCggtgcagattgcgtgggtgacacacccaaggtcacacggtgggtcagtggcagaaccgaggctagGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACTTACCGTGTGGATTCCTAGACCCACAGCCCAGCGAGGTCACCCCCTCCCATAGGGACATCAGGTACCGACACCCAGCACCAGCTCACGGGTGAGGCTGAGCCCACCTGGTTCCTCTTGTCTTCTCGGGCCCAGCGAAGAGCTCTTGGGCCGTATGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCAGCGTCCTCTT-CTGAGTTCACTGTCCTC s panTro4.chr1 30453255 380 + 228333871 GGAGC-TGGCTGGGAAGTTGTTTGTCAGTGGCCAAGAGCCACACCGGTGCAGACTGCGTGGgtgacgcacccaaggtcacacggtgggtcagtggcagaacccaggctagGCTGGCCCTGGAGCAGAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCTAGACCCACAGCCCAGCGAGGTCACCCCCTCCCATAGGGACATCAGGTACCGACACCCAGCACCAGCTCACGGGTGAGGCTGAGCCCACCTGGTTCCTCTTGTCTTCTCGGGCCCAGCGAAGAGCTCTTGGGCCGTATGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCAGCGTCCTCTT-CTGAGTTCACTGTCCTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30041126 380 - 229942017 GGAGC-TGGCTGGGAAGTTGTTTGTCAGTGGCCAAGAGCCACACCAGTGcagagtgcgtgggtgacacacccaaggacacaaggtgggtcagtggcagagcctaggctagGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCTAGATCCACAGCCCAGCAAGGTCACCCCCTCCCACAGGGACATCAGGTACCCACACCCAGCACCAGCTCACGGGTGAGGCTGAGCCCGCCTGGTTCCTCTTGTCTTCTCGGGCCCAGCAAAGAGCTCTTGGGCTGTATGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCAGCGTCCTCTT-CTGTGTTCACTGTCCTC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 452511 352 - 28733288 GGAGCTTGGC----------TTTGTCGGTGGCCAAGAGCCATACCAGGGcagaatgggtgggtgacacatccaaggccacacagtggttcagtggcagagcccaagccaggctggccccaaagcAGAC-----ACTGCCCACAGCC-TGGGAG----AGGACCCACCATGTGGCTTCCTAGACCCACAACCCAGTGAGGTCACCCCCTCCCACAGGGACACGGGGCACCCACACTCAGCACAAGCTCACGGGTGAGGCTGAGTCCACCTGGTTCCTCTTGTCTTCTCAGGCCCAGCCAAGGGCTCTTGGGCCATATGAGTGAGGGTCACCTGGTCATACA------------------------CCCTCAGCCTCCCCTTCCTGAACT--CTGTCCTC i nomLeu3.chr24 C 0 I 4936 s rheMac3.chr1 33338267 376 + 229590362 GGAGC-TGGCTGGGAAG----TTGTCAGTGGCCAAGAGCCACACCggtgcagagtgcgtgggtgacacacccaaggtcacatggtgggtcagtggcagagcccaggctagGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCTAGACCCACAGCCCGGTGAGGACACCCCCTCCCACAGGGACATCAGGTACCCACACCCAGCACCAGGTCACGGGTGAGGCTGAGCCCGCCTGGTACCTCTTGTCTTCTCGGGCCCAGCCAAGGGCTCTTGGGCTGTGTGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCCGCGTCCTCTT-CTGAGCTCACTGTCCTC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849407 380 - 227556264 GGAGC-TGGCTGGGAAGTTGTTTGTCAGTGGCCAAGAGCCACACCggtgcagagtgcgtgggtgacacacccaaggtcacatggtgggtcagtggcagagcccaggctagGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCTAGACCCACAGCCCGGTGAGGTCACCCCCTCCCACAGGGACATCAGGTACCCACACCCAGCACCAGGTCACGGGTGAGGCTGAGCCCGCCTGGTTCCTCTTGTCTTCTCGGGCCCAGCCAAGGGCTCTTGGGCTGTGTGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCCGCTTCCTCTT-CTGAGCTCACTGTCCTC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32615783 380 + 220367699 GGAGC-TGGCTGGGAAGTTGTTCGTCAGTGGCCAAGAGCCACACCGGTGCAGAGTGCGTGGGTGACACACACAAAGTCACACGATGGGTCAGTGGCAGAGCCGAGGCTAGGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCTAGACCCACAGCCCGGCGAGGTCACCCCCTCCCACAGGGACATCAGGTACCCACACCTAGCACCAGGTCATGGGTGAGGCTGAGCCCGCCTGGTTCCTCTTGTCTTCTCGGGCCCAGCCAAGGGCTCTTGGGCTGTGTGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCCGCGTCCTCTT-CTGAGCTCACTGTCCTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131025 371 - 130588469 GGAGC-TGGCTGGGAAATTGTTTGTCAGTGGCTAAGAGCCACACCggtgcagagtgcgggggtgacacacccaaggtcacac---gggtcagtggcagagcccaggctagGCTGGCCCTGGAGCAAAC-----ACTGGCCACAGCC-TGGGAG----GGGACCCACCATGTGGATTCCT-GACCCACAGC-----GAGGTCACCCCCTCCCACAGGGACATCAGGTACCCACACCCAGCACCAGCTCACGGGTGAGGCTGAGCCTGCCTGGTTCCTCTTGTCTTCTCAGGCCCAGCCAAGGGCTCTTGGGCTGTGTGAGTGAGGATCACCTGATCACATACCTTCCCTTAACAGA------TAGCCCTCCGTGTCCTCTT-CTGAGCTCACTGTCCTC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586578 366 + 155834243 GGAGC-TGGC-----------TTGTCAGTGGCCAAGAGCCACACCTgtgcagaatgcttgggtgacacacccaaggtcacacagtgggccattggcagagcccaggctaggctggccctggagccAAC-----ACTGGCCACAGCC-TGGGAG----GAAACCCACCACATGGACTCCTAGCCCCACAGCCCAGAGAGGCCA--CCCTCCCACAGGGACATCGGGCACCCACAC-CAGCACCAGCTTACAGGTGGGGTTGAGCCCGCCTGGTTCCTCTTGTCTTCTCCGGCCCAGCCAAGGGCTCTTGGGCTGTATGAGTGAGGGTCACCTGACCATGTACATTCCCTTAACAGA------GAGCCCTCAGCATCCTCTT-CTGAGCTCACTGTCCAT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14976310 393 - 85426708 GGAGC-TGGCCGGGAAAGTGTCTGTGGGTGGCCAAGAGCCGGGGCCATGCAGAGTGGGTGGG-GGCACACCCAC-GTCACAGGGTGGGTCATGGGCAGAGCCCGGGCCAGGCTGGCAGCAGAGCCCACAGGTGACTCACCCCTgccacgggagccacgggagcca-cgggTGGATTTCCAGACCCACAACCCAGGGAGGACGGTCCTTAGGGCAGGGACATCCAGGTCCCATGGCAAGCATCAGCCCAGGGTGGAGGCCGAG-AGGCCTGGGTCCCCTTGTCTCCTCGGGCTCAGACACAGGCTCCCAGGCCATATAGGTGAGGGCTGTCCGGTCATGTGTGTCCCCCTGGAGGAGTAGTCTAGTCCTTGATTTCCCCTTTCTGAGCTCGCTGTCCTC i canFam3.chr2 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=8040.000000 s hg38.chr1_KI270760v1_alt 21887 3 + 109528 CCC s panTro4.chr1 30453635 3 + 228333871 CCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30041506 3 - 229942017 CCC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33338643 3 + 229590362 CCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849787 3 - 227556264 CCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32616163 3 + 220367699 CCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131396 3 - 130588469 CCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586944 3 + 155834243 CCA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14976703 3 - 85426708 TCC i canFam3.chr2 C 0 I 1609 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 452863 4936 - 28733288 I a score=48765.000000 s hg38.chr1_KI270760v1_alt 21890 20 + 109528 GTTCAGTCCACTCGGGGAGG s panTro4.chr1 30453638 20 + 228333871 GTCCAGTCCACTCGGGGAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30041509 20 - 229942017 ATCCAGTCCACTTGGGGAGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33338646 20 + 229590362 ATCCAGTCCACTCGGGGAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849790 20 - 227556264 ATCCAGTCCACTCGGGGAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32616166 20 + 220367699 ATCCAGTCCACTCGGGGAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131399 20 - 130588469 ATCCAGTCCACTCGGGGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64586947 20 + 155834243 GTCCAGTCCACTCAGGGAAG i calJac3.chr7 C 0 I 5343 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 452863 4936 - 28733288 I e canFam3.chr2 14976706 1609 - 85426708 I a score=58279.000000 s hg38.chr1_KI270760v1_alt 21910 36 + 109528 TAAGGAGACACACCTCGTAATCAGAATGCTGCCTCC s panTro4.chr1 30453658 36 + 228333871 TGAGGAGACACACCTCGTAATCAGAATGCGGCCTCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30041529 34 - 229942017 TGAGGAG--ACACCTCGTAATCAGAACGCTGCCTCC i ponAbe2.chr1 C 0 I 4286 s rheMac3.chr1 33338666 36 + 229590362 TGAGGAGGCGCGCCTCGTAATCAGAACCCTGCCTCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29849810 36 - 227556264 TGAGGAGGCGCGCCTCGTAATCAGAACCCTGCCTCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32616186 36 + 220367699 TGAGGAGGCACACCTCGTAATCAGAACCCTGCCTCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131419 36 - 130588469 TGAGGAGGCGCACCTCATAATCAGAACCCTGCCTCC i chlSab2.chr20 C 0 C 0 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 452863 4936 - 28733288 I e canFam3.chr2 14976706 1609 - 85426708 I e calJac3.chr7 64586967 5343 + 155834243 I a score=3000.000000 s hg38.chr1_KI270760v1_alt 21946 2 + 109528 GC s panTro4.chr1 30453694 2 + 228333871 GC i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33338702 2 + 229590362 GC i rheMac3.chr1 C 0 I 4237 s macFas5.chr1 29849846 2 - 227556264 GC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32616222 2 + 220367699 GC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28131455 2 - 130588469 GC i chlSab2.chr20 C 0 I 4069 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 452863 4936 - 28733288 I e canFam3.chr2 14976706 1609 - 85426708 I e calJac3.chr7 64586967 5343 + 155834243 I e ponAbe2.chr1 30041563 4286 - 229942017 I a score=1203.000000 s hg38.chr1_KI270760v1_alt 21948 6 + 109528 TCTGTC s panTro4.chr1 30453696 6 + 228333871 TCTGTC i panTro4.chr1 C 0 I 4265 s macFas5.chr1 29849848 6 - 227556264 ACCGTG i macFas5.chr1 C 0 I 4080 s papAnu2.chr1 32616224 6 + 220367699 ACCGTG i papAnu2.chr1 C 0 I 4082 e mm10.chr4 25395270 2408 - 156508116 I e nomLeu3.chr24 452863 4936 - 28733288 I e canFam3.chr2 14976706 1609 - 85426708 I e calJac3.chr7 64586967 5343 + 155834243 I e ponAbe2.chr1 30041563 4286 - 229942017 I e chlSab2.chr20 28131457 4069 - 130588469 I e rheMac3.chr1 33338704 4237 + 229590362 I a score=270892.000000 s hg38.chr1_KI270760v1_alt 21954 91 + 109528 CCCTCAAGGAGGTCTGAAGAGCTGAGGTCCAGTGAGAAGCTCATCCACCATCTTCAGGGAGGCCTCAGGTC-GGGGGGACAGTCCTGATTTT s panTro4.chr1 30457967 91 + 228333871 CCCTCAAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGCTCATCCACCATCTTCAGGGAGGCCTCAGGTC-GGGGGGACAGTCCTGATTTT i panTro4.chr1 I 4265 C 0 s ponAbe2.chr1 30045849 91 - 229942017 CCCTCAAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGCTCATCCACCACCTTCAGGGAGGCCTCAGGTC-GGGGGGACAGTCCTGATTTT i ponAbe2.chr1 I 4286 C 0 s nomLeu3.chr24 457799 90 - 28733288 CCCTTGAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGCTAGTCCAGCACCTTCAAGGAGGCCTCAAGTTGGGGGGGACAGTCCTGACT-- i nomLeu3.chr24 I 4936 C 0 s rheMac3.chr1 33342941 91 + 229590362 CCCTCGAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGTTCGTCCACCACCTTCAGGGAGGCCTCAGGTC-AGGGGGACAGTCCTGACTTC i rheMac3.chr1 I 4237 C 0 s macFas5.chr1 29853934 91 - 227556264 CCCTCAAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGTTCGTCCACCACCTTCAGGGAGGCCTCAGGTC-AGGGGGACAGTCCTGACTTC i macFas5.chr1 I 4080 C 0 s papAnu2.chr1 32620312 91 + 220367699 CCCTCAAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAATTCGTCCACCACCTTCAGGGAGGCCTCAGGTC-AGGGGGACAGTCCTGACTTC i papAnu2.chr1 I 4082 C 0 s chlSab2.chr20 28135526 90 - 130588469 CCCTCAAGGAGGTCT-AAGAGCTGAGATCCAGTGGGAAGTTCGTCCACCACCTTCAGGGAGGCCTCAGGTT-GGGGGGACAGTCCTGACTTC i chlSab2.chr20 I 4069 C 0 s calJac3.chr7 64592310 91 + 155834243 CCCTCGAGGAGGTCTGAAGAGCCAAGGTCCAGTGGGAAGCTTATCCACCACCTTCAGGGAGGCCTCAGGTC-ACGGGGACAGTCCTGACTTC i calJac3.chr7 I 5343 C 0 e mm10.chr4 25395270 2408 - 156508116 I e canFam3.chr2 14976706 1609 - 85426708 I a score=1080019.000000 s hg38.chr1_KI270760v1_alt 22045 375 + 109528 GGGAGCCCCCAGTCTGG---AGAAGA------CACACGCCTGCTCTCAGGAGCCTCTAGG----GGGTGAAGTCAGAGACCTGCCCAAGGAGGCCCC--TCTGACTAGGGCGGGCAGGCAGCCCCGCCAGT--AGAG-TCCAGTCTGCTGGGGAGA--------CCTAGACCTCATCAGGACCAGGAGACGTCGGGGGAG-GCCAGACACTGCCGGGGAGACCCC-A-----------------GTCCCTGCAGACTC--AGAGACCTGAGC-TCACATTGTCCAGACA----GA-------CTCAAGGTGGCCCC-TCTCCCGCGTGGCCAGCCCCCTCCC--------------TGAGGCAGAGGGGCA-GCTTGGGGAGGT-GGGG----CTCCCAGATGGTGGAGCCTGGGGCTGAACTGCCAAGAGCATCCATCTCCATGGAGGCCCAGA s panTro4.chr1 30458058 375 + 228333871 GGGAGCCCCCAGTCTGG---AGAAGA------CACACGCCTGCTCTCAGGAGCCTCTAGG----GGGTGAAGTCAGAGACCTGCCCAAGGAGGCCCC--TCTGACTAGGGCGGGCAGGCAGCCCTGCCAGT--AGAG-TCCAGTCTGCTGGGGAGA--------CCTAGACCTCATCAGGACCAGGAGACGTCGGGGGAG-GCCAGATACTGCCGGGGAGACCCC-A-----------------GTCCCTGCAGACTC--AGAGACCTGAGC-TCACATTGTCCAGACA----GA-------CTCAAGGTGGCCCC-TCTCCTGGGTGGCCAGCCCCCTCCC--------------TGAGGCAGAGGGGCA-GCTTGGGGAGGT-GGGG----CTCCCAGATGGTGAAGCCTGGGGCTGAACTGCCAAGAGCATCCATCTCCATGGAGGCCCAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30045940 392 - 229942017 GGGAGCCCCCAGTCTGG---AAGAGA------CACACGCCTGCTCTCAGGAGCCTCTAGG----GGGTGAGGTCAGAGACCGGCCCAAGGAGGCCCC--TCTGACTAGGGCAGGGAGGCAGCCCTGCCGGT--AGAG-TCCAGTCTGCTGGGGAGA--------CCTAGACCTCACCAGGGCCAGGAGATGTCAGGGGAG-GCCAGACACTGCAGGGGAGACCCC-AGTCCCTGCAGACTCAGGGTCCCTGCAGACTC--AGAGACTTGCGC-TCACATTGTCCAGACA----GA-------CTCAAGGT-GCCCC-TCTCCTGGGTGGCCAGCCCCCTCCC--------------TGAGGCAGAGGGGCC-GCTTGGGGAGGTGGGGG----CTCCCAGATGGTGGAGCCTGGGGCTGAACTGCCAAGAGCATCCATCTCCACGGAGGCCCAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 457889 372 - 28733288 ------------TCTGG---AGAAGA------CACACGCCTGCTCTCAGGAGCCTCTAGG----GGGTGAAGTCAGAGACCTGCCCAAGGAGGCCCC--TCTGACTGGGGCGGGGAGGCAGCTTTGCCAGTACAGAG-TCCAGTCTGCTGGGGAGA--------CCTAGACCTCACCAGGGGCAGGAGCCCTTGGGGGAG-GCCAGACACTGCTGGGCAGACCCC-A-----------------GTCCCTGTAGACTCA-AGAGACCTGCACTTCACATGGTTCAGACACAGGCA-------CGCAAGATGGCCCCAACTCCCGGGCGGCCAGTCCCCTCCC--------------TGAGGCAG-GGGGCA-GCCTGGGGAGGTGGGGG----CTCCCAGATGGTGGACCCTGGGGCTGAGCTACCAAGAGCATCCATCTCCACAGAGGCCCAGA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33343032 381 + 229590362 GGGAGTCCCCAGTCGGGAGAAGAAGA------CACACAACTGCTCTCAGGAGACTCTGGG----GGTTGAAGTCAGGGACCTGCCCAAGGAGGCCCC--TCTGACTAGGGCGGGGAGGCAGCCCTGCCGGTAGAGAG-TCCAGTCTGTTGCGGAGA--------CCTAGACCTCACCAGGGCCAGGAGCCCTCGGGGGAG-GCCAGACACTGCCGAGGAGACCCC-G-----------------GTCCCTGCAGACTC--AGAGACCTGCAC-TCACATTGTCCAGACA----GA-------CGCAAGGTGGCCGC-TCTCCTGGGTGCCCAGCCCCCTCCC--------------TGAGGCAGAGGGGTA-GCTTGGGGAGGTGGGAG----CTCCCAGGTGGTGGACCCTGGGATTGAGATACCAAGAGCATCCATCTCCACAGAGGCCCGGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29854025 381 - 227556264 GGGAGTCCCCAGTCGGGAGAAGAAGA------CACACAACTGCTCTCAGGAGACTCTGGG----GGTTGAAGTCAGGGACCTGCCCAAGGAGGCCCC--TCTGACTAGGGCGGGGAGGCAGCCCTGCCGGTAGAGAG-TCCAGTCTGTTGGGGAGA--------CCTAGACCTCACCAGGGCCAGGAGCCCTCGGGGGAG-GCCGGACACTGCCGAGGAGACCCC-G-----------------GTCCCTGCAGACTC--AGAGACCTGCAC-TCACATTGTCCAGACA----GA-------CGCAAGGTGGCCGC-TCTCCTGGGTGCCCAGCCCCCTCCC--------------TGAGGCAGAGGGGTA-GCTTGGGGAGGTGGGGG----CTCCCAGGTGGTGGACCCTGGGACTGAGATACCAAGAGCATCCATCTCCACGGAGGCCCGGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32620403 381 + 220367699 GGGAGTCCCCAGTCGGGAGAAGAAGA------CACACAACTGCTCTCAGGAGCCTCTGCA----GGGTGAAGTCAGGGACCTGCCCAAGGAGGCCCC--TCTGACTAGGGCAGGGAGGCAGCTCTGCCAGCAGAGAG-TTCAGTCTGCTGGGGAGA--------CCTAGACTTCACCAGGGCCAGGAGCCCTCGGGGGAG-GCCAGACACTGCCGAGGAGATCCC-G-----------------GTCCCTGCAGACTC--AGAGACCTGCGC-TCACGTTGTCCAGACA----GA-------CGCAAGGTGGCCGC-TCTCCTGGGTGGCCAGCCCCCTCCT--------------TGAGGCAGAGGGGTA-GCTTGGGGAGGTGGGGG----CTCCCAGGTGGTGGACCCTGGGACTGAGATACCAAGAGCATCCATCTCCACGGAGGCCCGGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28135616 379 - 130588469 AGGAGTCCCCAGTCTGGAGGAGAAGA------CACAAAACTGCTCTCAGGAGCCCCCAGG----GGGTGAAGTCAGGGACCTGCCCAAGGAGACCCC--TCTGACTAGGGCGGGGAAGGAGCCCTGCCAGT--AGAG-TCCAGTCTGTTGGGGAGA--------CCTAGACCTCACCAGGGCCAGGAGCTCTCAGGGTAG-GCCAGACACTACCGAGGAGACCCC-A-----------------GTCCCTGCAGACTC--AGAGACCTGTGC-TCACATTGTCCAGACA----GA-------CGCAAGGTGGCCCC-TCTCCTGGGTGCCCAGCCCTCTCCC--------------CGAGGCAGAAGGGTG-GCTTGGGGAGGTGGGGG----CTCCCAGATGGTGGACCCTGGGGCTGAGCTACCAAGAGCATCCATCTCCACGGAGGCCCGGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64592401 370 + 155834243 GGGAAACCCCAGTCTGG---AGAAGA------CGCACTCCTGCTCTTAGGAGCCACT-GG----GGGCGAAGTCAGAGACTTGTCCAAGGAGGCCCC--TAT------GGTGGGGAGGCAGCCCTG-CAGT--AGAG-TCCAGTCTGCTGGGGAGA--------CCTAGACCTCACCAGGGCCAGGAGCCCTCGGGGGAG-GCCAGACACTGCTGAGGAGACCCCTG-----------------GTCCCTGCAGACTC--AGAGACCTGCGC-TCACACTGTCCAGACAAA--CA-------CACAAAGTGGTTCT-TCTCCTGGGCACCCAGCCACCTCCC--------------TAGGGCAGAGCAGCA-GCTTGGGGAGGTGGGGG----CTCCCAGATGATGGACTCTGGGGCTGAACTGCCAA-AGCATCCATCTCCATGGAGGCCCAGA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14978315 403 - 85426708 GGGAACTCCCA----GG---AGGAGACTCGCCCACAGGCCCACACTAAAGTGTCCGCAGGCTCATGGGGAAGTCAGGGCTTGTCCTGAGGAGACGCTAGTCTG-CTAG----AGGAGACAGTCCTGCCTTTAGAAAGCTGCAGTCTGTTGGGGTAGGGGAGGCTCCTAGTCCTCACTGGGGTCACAAGCCCTCTGGGAGGTACCAGGAATTCCTGAGGGGACCCA-G-----------------GTCCCTGCAGACTCACAGAGGCATGAGC-TCATGTTGTCCTAACA----GAGACCATCCATGAGGTGGCCCC-TCTCATAGGTGGACACCCCACTTCCCTGGACTCTGGGTTTGAAGCACAGGGGTACACTTCCAGTGGAAAGGAAACCCTCCCAGGTGCTGGA-CCTAAAACAGAGC---------------TCCCCCCAAGGATACGGG i canFam3.chr2 I 1609 C 0 e mm10.chr4 25395270 2408 - 156508116 I a score=285627.000000 s hg38.chr1_KI270760v1_alt 22420 86 + 109528 CCCCGTCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGGAGCCCGGATCCCAGCCTCGCGGTGCCCACAGCCTCCCGTGGTGCCA s panTro4.chr1 30458433 86 + 228333871 CCCCGTCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGCATTCCGGATCCCACCCTTTCAGTGCCCACAGCCTCCCGTGGTGCCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30046332 86 - 229942017 CCCCGTCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGCATTCCGGATCCCACCCTTTTGGTGCCTACAGCCTCCTGTGGTGCCA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 458261 86 - 28733288 CCGTGTCAGTGTGCT-CCCTGGCCTGGTGGTGGAAGGAGGGAGCCCGGATCCCAGCCTGGCGGTGCCCACAGCCTCCTGCGGTGCCA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33343413 86 + 229590362 CCCCATCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGGAGCCTGGATCCCAGCCTCTTGGTGCCCACAGCCTCCTGTGGTGCCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29854406 86 - 227556264 CCCCATCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGGAGCCTGGATCCCAGCCTCTTGGTGCCCACAGCCTCCTGTGGTGCCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32620784 86 + 220367699 CCCCATCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGGAGCCTGGATCCCAGCCTCTTGGTGCCCACAGCCTCCTGTGGTGCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28135995 86 - 130588469 CCCCATCAGTGTCCT-TCTTGGCCTGGTGGTGGAAGGAGGGAGCCCGGATCCCAGCCTCTCGGGGCCCCCAGCCTTCTGTGGTGCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64592771 86 + 155834243 CCCCGTCCGTGTCCT-CCCTGGCCTGGTGGTGGAAGGAGGGAGCCCGGATCCCAGCCTCGAGGCACTCACAGCCTCCTGGGGTGTCG i calJac3.chr7 C 0 C 0 s mm10.chr4 25397678 81 - 156508116 CCCCTTTCGTGTTCT---CTGGCCTGGTGGCAGAAGGCAGGGACCTTGACCTCAGCCTCCTGGTCTATATAACAAGAGGCATTG--- i mm10.chr4 I 2408 C 0 s canFam3.chr2 14978718 85 - 85426708 CCCCAGCAGTATCCTCCCCTGGCTCCGGGGAAGGAAGAGGGAGCCTAGA-CCCAGCCCTACTGTGCCC-CGGCATCCTGCATCATCA i canFam3.chr2 C 0 C 0 a score=1569012.000000 s hg38.chr1_KI270760v1_alt 22506 553 + 109528 TGGACGGGTCCCTG-CCTACTCTGAGCCCATCTCCTT-----------------GACTGTGGC-------------------TCTGATGCTGCCT--C------CACACTGGGATCTCTCTGC------------TCTC-------TTCACCTCATACCTCCTTCCCCCCACCTC----ACCCCATCGCCCCC-GTTCTTGATCCTGCAA-----TTGTAGAA----ACAGAAAGTTGGCTGA-TTTCTTGGGCCCGCAAATTGCCCAACAGGGAGACTGGGTGGGCGGCCCCCGCTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACGATTAGATTTCCAGCATAAATACCGCCTTACCAAACTGAATTAATCACG-----GCAAGGAGGGGCACACACAGGCTCCAGCAGCCTGGGCAGAACATCCCCAG-CATTAACCCTTCCGTCCTCACCCAGGCCCCCA---CCAGCAGGACGGAGGCTCCAGG---CCTCACAGAAGACGCCACTCAAAATATCACTGG-GGT---CACCTAATCC-C-ATCCCCCTTACCCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTAG-GAAGTGTCTTGCCC s panTro4.chr1 30458519 552 + 228333871 TGGACGGGTCCCTG-CCTACTCTGAGCCCATCTCCTT-----------------GACTGTGGC-------------------TCTGATGCTGCCT--C------CACACTGGGATCTCTCTGC------------TCTC-------TTCACCTCATACCTCCTTCCCCCCACCTC----ACCCCATCGCCCCC-GTTCTTGATCCTGCAA-----TTGTAGAA----ACAGAAAGTTGGCTGA-TTTCTTGGGCCCGCAAATTGCCCAACAGGGAGACTGGGTGGGCGGCCCCCGCTTCCACTCCATTGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACGATTAGATTTCCAGCATAAATACCGCATTACCAAACTGAATTAATCACG-----GCAAGGAGGGGCACACACAGGCTCCAGCAGCCTGGGCAGAACAT-CCCAG-CATTAACCCTTCCGTCCTCACCCAGGCCCCCA---CCAGCAGGATGGAGGCTCCAGG---CCTCACAGAAGACGCCACTCAAAATATCACTGG-GGT---CACCTAATCC-C-GTCCCCCTTACCCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTAG-GAAGTGTCTTGCCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30046418 553 - 229942017 TGGACGGGTCCCTG-CCTACTCTGAGCCCATCTCGTT-----------------GACTGTGGT-------------------GCTGATGCTGCCT--C------CACACTGGGATCTCTCTGC------------TCTC-------TTCACCTCATACCTCCTTCCCCCCACCTC----ACCCTCTCGCCCCC-ATTCTTGATCCTGCAA-----TTGTAGAA----ACAGAAAGTTGGCTTATTTTTTTGGGCCCACTAATTGCCCAACAGGGAGACTGGGTGGGCGGCCCCCGCTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGATGATTAGATTTCCAGCATAAATACCGCCTTACCAAACTGAATTAATCATG-----GCAAGGAGGGGCACACACAGGCTCCAGCAGCCTGGGCAGAACAT-CCCAG-CATTAACCTTTCCGTCCTCACCCAGGCCCCCA---CCAGCAGGACGGAGGCTCCAGG---CCTCACAGAAGACATCACTCAAAACATCACTGG-GGT---CACCTAATCC-T-GTCCCCCTTACCCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTAG-GAAGTGTCTTGCCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 458347 552 - 28733288 TGGACGGGTCCCTG-TCCGCTCTGAGCCCATCTCCTC-----------------ATCTGTGGC-------------------TCTGACGCTGCCT--G------CAGGCTGGGATCTCTGTGC------------TCTC-------TTCACCTCACACCCGCATCCCCCTGCTCC----ACCCTATCACCTCT-GTTCTTGATCCTGTAA-----CTGTAGAA----ACAGAAACTTGGCTAA-TTTCTTGGGCCTGCAAATTGCCCAGTGGGGAGACTGGGTGGGCGGCCCCCGCTTCCACTCCATCGCCCACGCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACTATTAGATTTCCAGCATAAATACCGCTTTACCAAACTGAATTAATCACG-----GCAAGGAGGGGCACACACAGGCTCCAGCAGCCTGGGCAGAACAT-CCCAG-CATTAACCCTTCCGTCCTCACCCAGGCCCCCA---CCAGCAGGACAGAGGCTCCAGG---CCTCCCAGAAGACACCACTC-AGCCATCATTGG-GGT---CACCTAATCC-CAGACCCTCTTACCCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCGAG-GAAGAGTCTTGTTC i nomLeu3.chr24 C 0 I 251 s rheMac3.chr1 33343499 555 + 229590362 TGGACGGGTCGCTG-CCCACTCTGAGCCCATCTCCTT-----------------GACTGTGGC-------------------TCTGATGCTACCT--C------CAGGCTGGGATCTCTCTGC------------TCTG-------TTCACATCACACCCGCTTGCCCCCATCTC----ACCCCATCGCCTCC-GTTCTTGATCCTGCAA-----TTGTAGAA----ACAGAAAGTTGACTAA-TTTCTTGGGCCTGCAAATTGCCCAGTGGGGAGCCTGGGTGGGCGGCCCCCACTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACGATTAGATTTCCAGCATAAATACTGCCTTACCAAACTGAATTAATCACA-----GCGAGGAGGGGCACACACAGCCCCCAGCAGCCTAGGCAGATCAC-CCCAG-CATTAACCCTTCCGTCCTCACCCAGG-CCCCA---CCAGCGGGACGGAGGCTCCAGG---CCTCCCAGAAGACGTCACTCAGAACATCATTGG-GGTCACCACCTAATTC-CAGACCCCTTTACGCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTGG-Gaagtgtcttgccc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29854492 555 - 227556264 TGGACGGGTCGCTG-CCCACTCTGAGCCCATCTCCTT-----------------GACTGTGGC-------------------TCTGATGCTACCT--C------CAGGCTGGGATCTCTCTGC------------TCTG-------TTCACATCACACCCGCTTGCCCCCATCTC----ACCCCATCGCCTCC-GTTCTTGATCCTGCAA-----TTGTAGAA----ACAGAAAGTTGACTAA-TTTCTTGGGCCTGCAAATTGCCCAGTGGGGAGCCTGGGTGAGCGGCCCCCACTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACGCTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACGATTAGATTTCCAGCATAAATACTGCCTTACCAAACTGAATTAACCACA-----GCGAGGAGGGGCACACACAGCCTCCAGCAGCCTAGGCAGATCAC-CCCAG-CATTAACCCTTCCGTCCTCACCCAGG-CCCCA---CCAGCGGGACGGAGGCTCCAGG---CCTCCCAGAAGACGTCACTCAGAACATCATTGG-GGTCACCACCTAATTC-CAGACCCCTTTACGCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTGG-gaagtgtcttgccc i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28136081 555 - 130588469 TAGATGGGTTGCTG-CCCACTCTGAGCCCATCTCCTT-----------------GACTGTGGC-------------------TCTGATGCTACCT--C------CAGGCTGGGATCTCTCTGC------------TCTG-------TTCACCTCACACCCGCTTCCCCCCACCTC----ACCCCATCGCCTCC-GTTCTTGATCCTGTAA-----TTGTAGAA----ACAGAAAGTTGACTAA-TTTCTTGGGCCTGCAAATTGCCCAGTGGGGAGACTGGGTGGGCGGCCCCCACTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTCTACCATCAGAAATGACGATTAGATTTCCAGCATAAATACTGCCTTACCAAACTGAATTAATCACA-----GCGAGGAGGGGCACACACAGCCTCCAGCAGCCTGGGCAGAACAT-CCCAG-CATTAACCCTTCCATCCTCACCCAGG-CCCCA---CCAGCGGGACGGAGGCTCCAGG---CCTCCCAGAAGACATCACTCAGAACATCATTGG-GGTCACCACCTAATTC-CAGACCCCCTTACCCTTTGCAGCCTCCCTCCTGTGGGAGTT---CCTGG-gaagtgtcttgccc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64592857 545 + 155834243 TGGACAGGTC-CTG-CTCACTCTGAGCCCATCTCCTC-----------------ATCTGCAGC-------------------TCCAATGCTGCCT--C------CAGACTGGGATCTCTCTGC------------TTTC-------TTCACCTCACACC--CCTTCCCCCGCCTC----ACCCCATCACCTCC-ATTCTTGATCCTATAA-----TTGTAGAA----ACAGAAACTGGGCTAA-TTTCTTGGCCCTGCAAATTGCCCAACAGGGAGACTGAGTGGGCGGCCCCCACTTCCACTCCATCGCCCACCCTGATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCTTCTACCATCAGAAATGACGATTAGATTTCCGGCATAAATACCGCTTTACCAAACTGAATTA--CACG-----GCAAGGAGGGG--CACACAGGCTCCAGCAGCCCGGGCAGAACAT--CGAG-CACTACCCTTTCCATGCTCACCCAGGCCCCCGCCCCCAGCAGGATGGAGGCTCCAGG---CCTCCCAGAAGATCCCACTGAGAACATCATT-G-GGT---CACCTAATCC-CAGACCCC--TGTCCTTTGCAGCCTCCCTCCCGTGAGAGTT---CCGAG-GAAGAGTCTTGCCC i calJac3.chr7 C 0 C 0 s mm10.chr4 25397759 565 - 156508116 TGGGCAGATCCCTG--CTGCT----GCTCATCTCCTCCTTGGATGAGGGGCAGGGCCTGGTGC-------------------CCAGAGATTGCCCTAC------CTCTGTGGGAATCCCCTGCCTCAGTGGGAATCCTC-------CTTTCTTTGACTCCATCCCTCTGTGTCTC----TCCTTGTCACCTTG-GTCCTTGATCCTGCCATCATCTTGCTCCA----ACAGCAACTTGGCTAA-TTTCTTGGGCCCATGAACCGCCCAATGGGGAGGCTGGGAGGGTGG---CCGCTTCTGCTCCATCACTCGTCCTAATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTTCACCATCAGAAATGACGATTAAATTCCCAGCGTAAATGCTGCTTTACCAAACTGAATTAATCACA-----GTGAGGAGGGG------CAGGCTCTA-CAGCCCAGCTGAGACGC----AG-GCAAGACCCACATGTTTTTATTGGGG---------T--GGGGGACG--GGCTCCAGG--TCCTCTCTGGACAACCCATGTGAAACCTCACTGGAGGT---CACCCAGTACACAGACCTC--TGCCATCTTCAGCCTCATTCTCTTCCGGGTCTGACTAAG-GGAGGAGGCAGCCC i mm10.chr4 C 0 C 0 s canFam3.chr2 14978803 595 - 85426708 TGGATGGGCCCCTGACCCTCTCCAGGCCCATCTTCTC-----------------ACCTGCTACCTGGGCTGGGCTGATGACACCAGATGCTGCCC--CCACCTTCACACTGGAATCTCTCACT------------TCTCCTCATTTCTCATCTCACATCTCCTTGTCCCCAACCCTCTGACTCCATCTCCCCCGGTTCCTGATCCTGCAA-----TTGTGGGAGATCACAGA---TTGGTTAA-TTTCTTGGGCCCGTAAATCGCCCAAGGGGGAGGCCAGGTGGGCGG-CCCCGCTTCCACTCCATCACCCACCCTAATGCATCGTCTGACACTTTCAATTTATTTTTCAATTCCTTTACCATCAGAAATGACGATTAAATTTCCAGCATAAATACCGCTTTACCAAACTGAATTAATCACGGGTGAGTGAGGAGGGG--CAGACAGGCCCCAGCAGCC--ATCAGAGCAT-CTCAGACATTAACCCTTCTGTCCTCACGGTGA-CCCCG---CAGGGAGGGCACAGGCCCTGGGGGCCTCCCCGGGGGCTGCCACTCAGAACCTCACTGG-GAT---CACCTGA-CC-CAGACCCCCGGCCCTCTTGCAGCCGGTCTCCTGTGGGGAGT---CTGGGAGAAGAGTCTTGCCC i canFam3.chr2 C 0 C 0 e papAnu2.chr1 32620870 0 + 220367699 C a score=655925.000000 s hg38.chr1_KI270760v1_alt 23059 351 + 109528 AAAGCCATCCACTCCATCAGGGCAGAGTCA-GAGACACTGGCCCCTCATCTCCAGCCCCATCAGGGAAGGAGGCTCCATCC------ACATCC------------------AGGACAAGATGTGGGAGT---ATCCGGGGTTTGGCG--TTGTCCAGGACACATACGGGAC-GGGACTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGGCCTGAACTGAAAGGGGTCTTGGAGAGACCTGGAGGCAGGTTCCAACCCTTGCCCCACAAACAAGACCATCACCCCTCTTTGCTGAGACTGTTCATTGCTCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAA s panTro4.chr1 30459071 351 + 228333871 AAAGCCATCCACTCCATCAGGGCAGAGTCA-GAGACACTGGCCCCTCATCTCCAGCCCCATCAGGGAAGGAGGCTCCATCC------ACATCC------------------AGGACATGACGTGGGAGT---ATCCGGGGTTTGGCG--TTGTCCAGGACACATACGGGAC-GGGACTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGGCCTGAACTGAAAGGGGTCTTGGAGGGACCTGGAGGCAGGTTCCAACCCTTGCCCCACAAACAAGACCATCACCCCTCTTTGCTGAGACTGTTCATTGATCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30046971 351 - 229942017 AAGGCCATCCACTCCATCAGGACAGAGTCA-GAGACACCGGCCCCTCATCTCCAGCCCCATCAGGTAAGGAGGCTCCATCC------ACATCC------------------AGTACATGACGTGGGAGT---ATCCGGGGTTTGGCG--TTGTCCAGGACATATACGGGAT-GGGGCTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGGCCTGAACTGAAAGGGGTCTTGGAGGGACCTGGAGGCAGGTTCCAACCCCCACCCCACAAACAAGACCATCACCCCTCTTTGCTGAGACTGTTCATTGATCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCAACTTCTCCATCTCTCTGACTCCAA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33344054 352 + 229590362 aaggccatccaccccatcagggcagagtca-gaaACACTGGCCCCTCATCTCCAGTCCCATGAGGGAAGGAGGCTCCATCC------ACATCC------------------AGGACATGATGTGGGAGT---ATCCAGGGTTTGGCA--TTGTCCAGGACACATACGGAATGGGGGCTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGACCTGAACTGAAAGGGGTCTTGGAGGGACCTGGAAGCAGGTTCCCACCCCCGCCCCGCAAACAAGATCATCACCCCTCTTTGCTGAGACTGTTCGTTGATCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACTCCAA i rheMac3.chr1 C 0 T 54 s macFas5.chr1 29855047 352 - 227556264 aaggccatccaccccatcagggcagagtca-gaaacactggcccctcatctccagtcccaTGAGGGAAGGAGGCTCCATCC------ACATCC------------------AGGACATGATGTGGGAGT---ATCCAGGGTTTGGCA--TTGTCCAGGACACATACGGAATGGGGGCTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGACCTGAACTGAAAGGGGTCTTGGAGGGACCTGGAAGCAGGTTCCCACCCCCGCCCCGCAAACAAGATCATCACCCCTCTTTGCTGAGACTGTTCGTTGATCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACTCCAA i macFas5.chr1 C 0 T 57 s chlSab2.chr20 28136636 352 - 130588469 aaggccatccaccccatcagggcaaagtca-gagacactggcccctcatctccagccccaTGAGGGAAGGAGGCTCCATCC------ACATCC------------------AGGACATGACGTGGGAGT---ATCCAGGGTTTGGCA--TTGTCCAGGACACATACAAAATGGGGGCTCCTGCAGACCCGAGGGTGGGGGCACCCAGTGATCACAGGACCTGAACTGAAAGGGGTCTTGGAGGGACCTGGAAGCAGGTTCCCACCCTCGCCCCACAAACAAGATCATCACCCCTCTTTGCTGAGACTGTTCGTTAATCAGTCCAACAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACGCCAA i chlSab2.chr20 C 0 T 54 s calJac3.chr7 64593402 349 + 155834243 AGGGTCACCCAC-CCATCAGGGTGGAGTCA-GAGGCACTAGCCCC-CACCTCCAGCCTCATCAGGGCAGGAGGCTCCATCC------ACATCC------------------AAGACATGACGTGGGCAT---ATCCAGGGTTTGGCG--TTGTCTGGGACACATATGGGAT-GGGGTTCCTGCAGACCCGAGAGTGGCGTCACCCAGTGATCACAGGGCCTGAACTGAGAGAGGTCTTGGAGGGACCTGGAGGCAGCTTCCCACTCCCACCCCACAACCAAGGCCATCACCCCGCTTTGCCAAGCCTGCTCATTGATCAGTCCAACAAACACAGCTCAGAGTGGCCTCCGGTTTCCCCACTTCTCCATCCCCTTGACCCCAA i calJac3.chr7 C 0 T 57 s mm10.chr4 25398324 297 - 156508116 AGGGTCATT--GCTTGTCAGAGCAGACCCA-CAGGCATAGGCCAGGCTTTTTCTGACCCACCCATG--------CCCTGCC------ACAC----------------------------ATGTGGGAGTGTAGTCCCAGACTTGATACCTTTTTGATTGCATGTGTGGGGCCAGGGCTCCCTTAGACTCAGCACTA--AGTACCCAGTGATCTCA-----------------------GAAGGACCCAAGGGGCAGCCTCATATCCCACCTTCAT---CAAGGCCACAGCAGGGCCATGCT---ACTCCCCA---------CCAGCAGCCAAGTTCCACCTTTCTCTCCTTCTACCCTTCCTTTCCACCCCAGCCACACCCA i mm10.chr4 C 0 C 0 s canFam3.chr2 14979398 299 - 85426708 AAGGTCACCTTCCCCAGCAGCGCAGAGTCAGGGGACACCCGCCCCACATCCCCAGAC-------------GGGCTCCTTCCTGACCTACCTCCAGCTGGACCACCTGAGAGAGGGCACGGTGTGGGGGAG--ATCCGGGGTTTGGGA--TTATCCAGGCCACCTGTGGGGCCCGGGCTCCTGCGGGTGTGAGGGTGGGGACCCCAGAGGATCGCAGAACCTGGGCTGATAGGAGTCGCGGAGGGAC--GGGGGCGGGG-------------CAGCCTGTGAGGCCCTCACCCACCCCTTC---------------------------ACCACCGC------------------------CCCCTCCACCACGGTGATACCAG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e papAnu2.chr1 32620870 0 + 220367699 C a score=35020.000000 s hg38.chr1_KI270760v1_alt 23410 41 + 109528 CCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACC s panTro4.chr1 30459422 41 + 228333871 CCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACC i panTro4.chr1 C 0 I 162 s ponAbe2.chr1 30047322 41 - 229942017 CCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCACC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33344352 41 + 229590362 CCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATC i rheMac3.chr1 T 54 C 0 s chlSab2.chr20 28136934 41 - 130588469 CCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATC i chlSab2.chr20 T 54 C 0 s mm10.chr4 25398621 37 - 156508116 ----GCCCCTCCCTGACCTCTATGTTCGCTCCCTTTTCTCC i mm10.chr4 C 0 I 13 s canFam3.chr2 14979697 19 - 85426708 ------CCCA-----ACCTACAGCTGCACC----------- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593751 57 + 155834243 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=10365.000000 s hg38.chr1_KI270760v1_alt 23451 13 + 109528 TCCCTGACTCCAA s panTro4.chr1 30459625 13 + 228333871 TCCCTGACTCCAA i panTro4.chr1 I 162 C 0 s ponAbe2.chr1 30047363 13 - 229942017 TGTCTGACTCCAA i ponAbe2.chr1 C 0 T 54 s rheMac3.chr1 33344393 13 + 229590362 TCCCTGACTCCAA i rheMac3.chr1 C 0 C 0 s chlSab2.chr20 28136975 13 - 130588469 TCCCTGACGCCAA i chlSab2.chr20 C 0 C 0 s mm10.chr4 25398671 13 - 156508116 TAGCCGACTCATC i mm10.chr4 I 13 I 2 e nomLeu3.chr24 458899 251 - 28733288 I e canFam3.chr2 14979716 0 - 85426708 C e calJac3.chr7 64593751 57 + 155834243 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=12699.000000 s hg38.chr1_KI270760v1_alt 23464 12 + 109528 CCACAGCTCAGG s panTro4.chr1 30459638 12 + 228333871 CCACAGCTCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047322 12 - 229942017 CCACAGCTCAGG i ponAbe2.chr1 T 54 C 0 s rheMac3.chr1 33344406 12 + 229590362 CCATAGCTCAGG i rheMac3.chr1 C 0 T 69 s chlSab2.chr20 28136988 12 - 130588469 CCATAGCTCAGG i chlSab2.chr20 C 0 T 69 s mm10.chr4 25398686 12 - 156508116 CAGTAGCCTGGG i mm10.chr4 I 2 I 1 e nomLeu3.chr24 458899 251 - 28733288 I e canFam3.chr2 14979716 0 - 85426708 C e calJac3.chr7 64593751 57 + 155834243 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=3519.000000 s hg38.chr1_KI270760v1_alt 23476 18 + 109528 GTGACCTCCAGC-CTCCCC s panTro4.chr1 30459650 18 + 228333871 GTGACCTCCAGC-CTCCCC i panTro4.chr1 C 0 T 43 s ponAbe2.chr1 30047334 18 - 229942017 TTGACCTCCAGC-CTCCCC i ponAbe2.chr1 C 0 C 0 s mm10.chr4 25398699 19 - 156508116 TCAGCTGCCAACACTCCCC i mm10.chr4 I 1 C 0 s canFam3.chr2 14979716 10 - 85426708 -TGACATCCCG-------- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=136.000000 s hg38.chr1_KI270760v1_alt 23494 12 + 109528 AACTTCTCCACC s ponAbe2.chr1 30047352 11 - 229942017 -ACTTCTCCACC i ponAbe2.chr1 C 0 C 0 s mm10.chr4 25398718 4 - 156508116 AGCT-------- i mm10.chr4 C 0 C 0 s canFam3.chr2 14979726 10 - 85426708 --GTCCTCCACC i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T e panTro4.chr1 30459668 43 + 228333871 T a score=8477.000000 s hg38.chr1_KI270760v1_alt 23506 25 + 109528 TCCCTGACTCCAACCACAGCTCAGG s panTro4.chr1 30459625 25 + 228333871 TCCCTGACTCCAACCACAGCTCAGG i panTro4.chr1 T 43 C 0 s ponAbe2.chr1 30047363 25 - 229942017 TGTCTGACTCCAACCACAGCTCAGG i ponAbe2.chr1 C 0 T 108 s mm10.chr4 25398722 20 - 156508116 --CCAGGATCCAACCCCTGCTC--- i mm10.chr4 C 0 I 4 s canFam3.chr2 14979736 16 - 85426708 TCCCCGACCCCGACCA--------- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=2691.000000 s hg38.chr1_KI270760v1_alt 23531 19 + 109528 GTGACCTCCAGCCTCCCCA s panTro4.chr1 30459650 19 + 228333871 GTGACCTCCAGCCTCCCCA i panTro4.chr1 C 0 T 206 s ponAbe2.chr1 30047280 18 - 229942017 TTGACCTCCAGCCTCCCA- i ponAbe2.chr1 T 108 C 0 s mm10.chr4 25398746 16 - 156508116 GAAGCTTCTGGTCCCA--- i mm10.chr4 I 4 I 1 s canFam3.chr2 14979752 11 - 85426708 --------CCGCCTCCTCA i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=-547.000000 s hg38.chr1_KI270760v1_alt 23550 11 + 109528 GCTTCTCCACA s ponAbe2.chr1 30047298 11 - 229942017 ACTTCTCCATC i ponAbe2.chr1 C 0 C 0 s mm10.chr4 25398763 7 - 156508116 GCTGGTG---- i mm10.chr4 I 1 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e canFam3.chr2 14979763 0 - 85426708 C e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T e panTro4.chr1 30459669 206 + 228333871 T a score=3202.000000 s hg38.chr1_KI270760v1_alt 23561 10 + 109528 TCCCTGACTC s panTro4.chr1 30459463 10 + 228333871 TCCCTGACTC i panTro4.chr1 T 206 C 0 s ponAbe2.chr1 30047309 10 - 229942017 TCTCTGACTC i ponAbe2.chr1 C 0 T 54 s mm10.chr4 25398770 10 - 156508116 TCTCccacca i mm10.chr4 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e canFam3.chr2 14979763 0 - 85426708 C e calJac3.chr7 64593751 57 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855399 57 - 227556264 T a score=117469.000000 s hg38.chr1_KI270760v1_alt 23571 69 + 109528 CAACCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACCT-----CCCTGACTCCAACCACAGCTCAGG s panTro4.chr1 30459473 69 + 228333871 CAACCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACCT-----CCCTGACTCCAACCACAGCTCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047265 69 - 229942017 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCAACTTCTCCATCT-----CTCTGACTCCAACCACAGCTCAGG i ponAbe2.chr1 T 54 C 0 s rheMac3.chr1 33344349 69 + 229590362 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCT-----CCCTGACTCCAACCATAGCTCAGG i rheMac3.chr1 T 69 T 69 s macFas5.chr1 29855342 69 - 227556264 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCT-----CCCTGACTCCAACCATAGCTCAGG i macFas5.chr1 T 57 T 69 s chlSab2.chr20 28136931 69 - 130588469 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCT-----CCCTGACGCCAACCATAGCTCAGG i chlSab2.chr20 T 69 T 69 s calJac3.chr7 64593694 69 + 155834243 CAAACACAGCTCAGAGTGGCCTCCGGTTTCCCCACTTCTCCATCC-----CCTTGACCCCAACCATAGCTCAGG i calJac3.chr7 T 57 T 69 s mm10.chr4 25398780 60 - 156508116 ccaccaccac---------caccCAACCTCCTCATACTTCAAGTTTCCTACCTTGACACCCCTCACCGA----- i mm10.chr4 C 0 C 0 s canFam3.chr2 14979763 34 - 85426708 ----------------------CCGGCCTCCCCACTCGCACACTC---------GCGCCCAATCA--------- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e papAnu2.chr1 32620870 0 + 220367699 C a score=6829.000000 s hg38.chr1_KI270760v1_alt 23640 32 + 109528 GTGACCTCCAGCCTCCCCAA------CTTCTCCACCTC s panTro4.chr1 30459542 31 + 228333871 GTGACCTCCAGCCTCCCCA-------CTTCTCCACCTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047334 31 - 229942017 TTGACCTCCAGCCTCCCCA-------CTTCTCCACCTG i ponAbe2.chr1 C 0 C 0 s mm10.chr4 25398840 38 - 156508116 GAACTTTCCTGCCCCCTCTAAATTAGATTCTCCCTCTC i mm10.chr4 C 0 I 219 s canFam3.chr2 14979797 15 - 85426708 ------------TTCCCCA-----------TCCACCGG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593763 69 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855411 69 - 227556264 T a score=2669.000000 s hg38.chr1_KI270760v1_alt 23672 8 + 109528 CCTGACTC s panTro4.chr1 30459573 8 + 228333871 CCTGACTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047365 8 - 229942017 TCTGACTC i ponAbe2.chr1 C 0 T 108 s canFam3.chr2 14979812 7 - 85426708 -CAGAGTC i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593763 69 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855411 69 - 227556264 T a score=12606.000000 s hg38.chr1_KI270760v1_alt 23680 55 + 109528 CAACCACAGCTCAGGGTG-ACCTCCAGCCTCCCCAACTTCTCCACCTCCCTGACTC s panTro4.chr1 30459581 54 + 228333871 CAACCACAGCTCAGGGTG-ACCTCCAGCCTCCCCA-CTTCTCCACCTCCCTGACTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047265 54 - 229942017 CAACCACAGCTCAGGTTG-ACCTCCAGCCTCCCAA-CTTCTCCATCTCTCTGACTC i ponAbe2.chr1 T 108 C 0 s canFam3.chr2 14979819 41 - 85426708 ----CTGCTCTCAAAGTGCACGTGATGCCTGTCCT-----------TTCCTGACTC i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593763 69 + 155834243 T e chlSab2.chr20 28137000 69 - 130588469 T e rheMac3.chr1 33344418 69 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855411 69 - 227556264 T a score=123162.000000 s hg38.chr1_KI270760v1_alt 23735 69 + 109528 CAACCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAACCACAGCTCAGG s panTro4.chr1 30459635 69 + 228333871 CAACCACAGCTCAGGGTGACCTCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAACCACAGCTCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047319 69 - 229942017 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCACCTGTCTGACTCCAACCACAGCTCAGG i ponAbe2.chr1 C 0 T 12 s rheMac3.chr1 33344349 69 + 229590362 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACTCCAACCATAGCTCAGG i rheMac3.chr1 T 69 T 12 s macFas5.chr1 29855342 69 - 227556264 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACTCCAACCATAGCTCAGG i macFas5.chr1 T 69 T 12 s chlSab2.chr20 28136931 69 - 130588469 CAACCACAGCTCAGGTTGACCTCCAGCCTCCCCACTTCTCCATCTCCCTGACGCCAACCATAGCTCAGG i chlSab2.chr20 T 69 T 12 s calJac3.chr7 64593694 69 + 155834243 CAAACACAGCTCAGAGTGGCCTCCGGTTTCCCCACTTCTCCATCCCCTTGACCCCAACCATAGCTCAGG i calJac3.chr7 T 69 T 12 s canFam3.chr2 14979860 35 - 85426708 -----AGAGC---------CCTCCCGCCTCC--------------------CTCTGCCCTGAGAtcagg i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e papAnu2.chr1 32620870 0 + 220367699 C a score=2451.000000 s hg38.chr1_KI270760v1_alt 23804 42 + 109528 GTGACATCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAG s panTro4.chr1 30459704 42 + 228333871 TTGACCTCCAGCCTCCCCACTTCTCCACCTCCCTGACTCCAG i panTro4.chr1 C 0 C 0 s canFam3.chr2 14979895 11 - 85426708 -----------------------------tccctgccccc-- i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e calJac3.chr7 64593763 12 + 155834243 T e ponAbe2.chr1 30047388 12 - 229942017 T e chlSab2.chr20 28137000 12 - 130588469 T e rheMac3.chr1 33344418 12 + 229590362 T e papAnu2.chr1 32620870 0 + 220367699 C e macFas5.chr1 29855411 12 - 227556264 T a score=302943.000000 s hg38.chr1_KI270760v1_alt 23846 190 + 109528 CCACAGCTCAGGCTCCTTCCTATGAGACCCCCATGGCCT-CTCACAG-CCTCTCCACTTCTATGCCTGTTCTCACCCAATCCCCATCCCTCAGC--AGTCATCACCTCAAAATGCAAACACTGTCCTATGGTTTCCTGGCTCAGAACCCATCGGGCcctcctctgctctcaaatcaggcccccacccttcaagg s panTro4.chr1 30459746 190 + 228333871 CCACAGCTCAGGCTCCCTCCTATGAGACCCCCATGGCCT-CTCACAG-CCTCTCCACTTCTATGCCTGTTCTCACCCAATCCCCATCCCTCAGC--AGTCATCGCCTCAAAATCCAAATGCTGCCCTATGGTTTCCTGGCTCAGAACCCATCGGGCcctcctctgctcacaaatcaggcccccacccttcaagg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047376 190 - 229942017 CCACAGCTCAGGCTCCCTCCTATGAGACCCTCATGGCCT-CTCACAG-CCTTTCCACTTCTATGCCTGTTGTCACCCAATCCCCATCCCTCAGC--AGTCATCGCCTCAAAATGCAAACACTGTCCTATGGTTTCCTGGCTCAGAACCcattgggccctcctctactctcaaatcaggcccccacccttcaagg i ponAbe2.chr1 T 12 C 0 s rheMac3.chr1 33344406 192 + 229590362 CCATAGCTCAGGCCCCCTCCTGTGAGACCCCCATGGCCT-CTCGCAG-CCTCTCCTCTTCTATGCCTGTTCCCACCCAATCCCCATCCCTCAGCAGAGTCATCGCCTTAAAATGCAAACACTGCCCCATGGTTTCCTGGCTCAGAACCCATCGGGCTCTCCTCTGCTTTCAGATCAGGCCTCCACCCTTCAAGG i rheMac3.chr1 T 12 C 0 s macFas5.chr1 29855399 192 - 227556264 CCATAGCTCAGGCCCCCTCCTGTGAGACCCCCATGGCCT-CTCGCAG-CCTCTCCTCTTCTACGCCTGTTCCCACCCAATCCCCATCCCTCAGCAGAGTCATCGCCTTAAAATGCAAACACTGCCCCATGGTTTCCTGGCTCAGAACCCATCGGGCTCTCCTCTGCTTTCAGATCAGGCCCCCACCCTTCAAGG i macFas5.chr1 T 12 C 0 s chlSab2.chr20 28136988 192 - 130588469 CCATAGCTCAGGCCCCCTCCTGTGAGACCCCCATGGCCT-CTCGCAG-CCTCTCCACTTGTATGCCTGTTCCCACCCAATCCCCATTCCTCAGCAGAGCCATCGCCTGAAAATGCAAACACTGCCCCATGGTTTCCTGGCTCAGAACCCATCAGGCCCTCCTCTGCTCTCCGATCAGGCCCCCACCCTTCAAGG i chlSab2.chr20 T 12 C 0 s calJac3.chr7 64593751 192 + 155834243 CCATAGCTCAGGC-CCCTCCTGTGGGACCACCATGGCCT-CCCGCAGTCCTCTCCACTTCCATGCCTGTTCCCACCCAATCCCCGTCCCTCAGCCGAGTCATCGCCTCAAAATGCTAACACAGTTCCATTGTTACCTGGCTCAGAACCCCTCGGGGACTCCTTGGCGCTCAGAACAGGTCCCCACCCTTAAAGG i calJac3.chr7 T 12 C 0 s canFam3.chr2 14979906 103 - 85426708 ----------------------tgtggccaccaggacctggtgaccg-gctct------------------------gacccccttcc--tggtggggctgatgcctc------------------------ctcctgcttcagg-----------tcttttctgttt-------aaactccctcctcacagga i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e papAnu2.chr1 32620870 0 + 220367699 C a score=2433852.000000 s hg38.chr1_KI270760v1_alt 24036 1815 + 109528 ccatgaggactgggctggcctggcccctaccggtcagtgcactcccccatcctggctgggttgtctcctctttctccttcaagtttttctatttaaaattcccctcctcagagaaccttctctggccaccatcccccaatctaaattaggttctccctcctaaggttctttctcaaatccatttcctttccttctgagcac-ttaa-gcgagcgataattacacactaacttgtgtaatttgtttaataggatctttgggacagagactttatctgactcgcttgat---gctgcagctgctagaacccagaccgtaatgtagtgggagctcagtgcagacttttgaag----------gagtaagtGAGTAAAAGAACAACAA----------GCCCCTCTTGGTGCCCACCAAGTGCCAAGCTGAGACTGGGCCCTGGAGCTGGAGTCAAGATGTGGACCTGGCCTTGGtgtgctgggccctaacagatgagtaggagtttgccgagcactgaaggtggggTTGACATGACCAACTTCTGAGAGGCACTCTTTGCCTCTGGATGGCCCCTTCCCAGTCACCCCAAAAGGAAGCCCTTGCCCTTTCAAAAGTGGTGAATGTGGTGGTTCAGATCGGTAGGTGTTCCTATGAATAGGTGAGGG-GCcaggcttcaggtcagttgaacctgggtttgaatcctgattttgctcttggtacta---------gggcaggtcactgagacgctctgagcctcTCTGC-------TCCAGGATGAGGATCCCTTCATCCATGCTCACTCAAAGTCCTGCCCACCAGGATGGAGGCAGACAGGCTGCAATGCCCTCCCCTCTCAGTGGGGGAAAAATACCAGGTCAGGCAGCCAG-CAGCCGAGAATGCCAGGCAGAGCAAAGGTGTCCTAAGGGATGGACAGAATAAGGGCTTGAGAGCCTAGCCAAGGGTGAGGCTAGGAGAGGCTTCCCGGAGGACGAGGCAAGTCAGAGCTCTTTGCCTCTTACTCCCATGACTGTGGGTGCCTTTCTCCTCCTCCTCTCATTCTCTCTCCTTTCCAGCTCCTGCTCTGCTCATTTCTTCACCTCAG--TCTCTCTGCCCCGACAGGAGCCCTGAGGGACACAACCCCGTCCCGAGGAAT--GTATCTGCCCACTTCCAGCAGGTTCCTGGAGGCCCTCTAAAT--------TCCCCTTCCCCCCAAAGTCATCTCCCAACACTGCT----------------GCTCCCAGGGTGGGACGCCTGCTGCTGCACCTC------------------------------------------CACACACGTGCACACA--CCCAGCCAGGTGCAGACAGCGTGGGCAGTGCAGAGGGGA-----GGGCTGGGGATT--------------AAGGAGTTCGTGT----TCTTGA--GCAGCCTGGAAAGCAGCA-GGGCTTCCACAGGAGCCGCCCCTGCCCTCACCCCTGCCCAGTAGGGTTAAGGGGCTGGCTTAGATGTCACCCCAAGCCAAGGCTGTCCTTCTCAGAGGCTCCTTCCCAGCTCCC-----------CTGAGtgggtcagtcccttcccctctctgagcccctctttcctcttctgtaaagcagactcagtgatg---ttgctcagag----gattgaaggacaaagaaaagcaacacaatggacagcagggatttgc-aaacagccgggtgctgtacCCAAGACAGGGTATTGCTGGTGATGTCTGATGGATGGGGAGTTGAAAGACTCAG--------------CTGTCACTGGGCAGCTGGGTCTGGTTCCCCTGAGTCATTCGTAATTCACCAACCcagtctatagaagcttattaagcacttattgtgtgccatgctccatgcaagggccaaagacacca---tgagcagagccagacccc-accctcaGGTTCCCCC---ATGGGATGGGG---TTAGCCAGATGA s panTro4.chr1 30459936 1831 + 228333871 ccatgacgactgggctggcctggcccctactggtcagtgcactcccccgtcctggctgggttgactcctctttctccttcaagtttttctatttaaacttcccctcctcatagaaccttctctggccaccatcccccaatctaaattaggttctccctcctaaggttctttctcaaatccatttcctttccttctgagcac-ttag-gcgagcgataattacacactaacttgtgtaatttgtttaataggatctttgggacagagactttatctgactcgcttgatcaagctgcagctgctagaacccagaccgtaatgtagtgggagctcagtgcagacttttgaag----------gagtaagtGAGTGAAAGAACAACTA----------ACCCCTCTTGGTGCCCACCAAGTGCCAAGCTGAGACTGGGCCCTGGAGCTGGAGTCAACATGTGGACCTGGCCTTGGtgtgctgggccctaacggatgagtaggagtttgccgagcactgaaggtggggTTGACATGACCAACTTCTGAGAGGCACTCTTTGCCTCTGGATGGCCCCTTCCCAGTCACCCCAAAAGGAAGCCCTTGCCCTTTCAAAAGTGGTGAATGTGGTGGTTCAGATCGGTAGGTGTTCCTATGAATAGGTGAGGG-GCcaggcttcaggtcagttgaacctgggtttgaatcctgattttgctcttggtacta---------gggcaggtcactgagacgctctgagcctctctgcctcctgctccgggatgaggatCCCTTCATCCATGCTCACTCAAAGTCCTGCCCACCAGGATGGAGGCAGACAGGCTGCAATGCCCTCCCCTCTCAGTGGGGGAAAAATACCAGGTCAGGCAGCCAG-CAGCTGAGAATGCCAGGCAGAGCAAAGGTGTCCTAAGGGACGGACAGAATAAGGGCTTGAGAGCCTAGCCAAGGGTGAGGCCAGGAGAGGCTTCCTGGAGGATGAGGCAAGTCAGAGCTCTTTGCCTCTTACTCCCATGACTGTGGGTGCCTTTCTCCTCCTCCTCTCATTCTCTCTCCTTTCCAGCTCCTGCTCTGCTCATTTCTTCACCTCAG--TCTCTCTGCCCCGACAGGAGCCCTGAGGGACACAACCCCGTCCCGAGGAAT--GTATCTGCCCACTTCCAGCAGGTTCCCGGAGGCCCTCTAAAT--------TCCCCTTCCCCCCAAAGTCATCTCCCAACACTGCT----------------GCTCCCAGGGTGGGACGCCTGCTGCTGCACCTC------------------------------------------CACACACGTGCACACA--CCCAGCCAGGTGCAGACAGCGTGGGCAGTGCAGAGGGGACACCAGGGCTGGGGATT--------------AAGGAGTTCGTGT----TCGTGA--GCAGCCTGGAAAGCAGCA-GGGCTTCTGCAGGAGCCGCCCCTGCCCTCACCCCTGCCCAGTAGGGTTAAGGGGCTGGCTTAGATGTCACCCCAAGCCAAGACTGTCCTTCTCAGAGGCTCCTTCCCAGCTCCC-----------CTGAGtgggtgagtcccttcccctctctgagcccctctttcctcttctgtaaagcagactcagtgatg---ttgctcagag----gattgaaggtcaaagaaaagcaacacaatggacagcagggatttgc-aaacagccgggtgctgtacCCAAGACAGGGTATTGCTGGTGATGTCTGATGGATGGGGAGTTGAAAGACCCAG--------------CTGTCACTGGGCAGCTGGGTCTGGTTCCCCTGAGTCATTCGTAATTCACCAACCcagtctatagaagcttattaagcacttattgtgtgccatgctccatgcaagggccaaagacacca---tgagcagagccagacccc-accctcaGTTTCCCCC--CATGGGATGGGG---TTAGCCAGGTGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30047566 1817 - 229942017 ccatgaggactgggctggcctggcccctaccggtcagtgcactcccccatcctggctgggtttactcctctttctccttcaagtttttctgtttaaacttcccctcctcagagaaccttctctggccaccatcccccaatttaaattaggttctccctcctaaggttctttctcaaatccatttcctttccttctgagcac-ttaa-gggagcgataattacatactaacttgtgtaatttgtttaataggatctttgggacagagactttatctgacttgcttgat---gctgcagctgctagaacccagaccgtaatgtagtggatgctcagtgcagacttttgaag----------gagtaagtGAGTGAAA---------------------CCCTCTTGGTGCCCACCAAGTGCCAAGCTAAGACTGGGCCCTGGAGCTGGAGCCAAGATGTGGACCTGGCCTCGGtgtgctgggctctaacggatgagtaggagttcaccgagcactgaaggtggggTTGACATGACCAACTTCTGAGAGGCACTCTTTGCCTCTGGATGACCCCTTTCCAGTCACCCCAAAAGGAAGCCCTTGCCCTTTCAAAAGTGGTGAATGTGGCGGTTCAGATCGGTAAGTGTTcctatgaataggtgaggg-gccaggcttcaggtcagttgaacctgggtttgaatcctgattctgctcttggtactg---------gagcagatcactgagacgctctgagcctctctgcctcctgctctgggatgaggatCCCTTCATCCCTGCTCACTCAAAGTTCTGCCCACCAGGATGGAGGCAGACAGGCTGCAATGCCCTCCCCTCTCAGTGGGGGAAAAATACCCAGTCAGGCAGCCAG-CAGCCGAGAATGCCAGGCAGAGCAAAGGTGTCCTAAGGGATGGACAGAATAAGGGCTCGAGAGCCTAGCCAAGGGTGAGGCCAGGAGAGGCTTCCTGGAGGACGAGGCAAGTCAGAGCTCTTTGCCTCTTACTGCCATGACCATGGGTGCCTTTCTCCTCCTCCTCTCATTCTCTCTCGTTTCCTGCTCCTGCTCTGCTCATTTCTTCACCTCAG--TCTCTCTGCCCCGACAGGAGCCCTGAGGGACAAAACCCCATCCCGAGGAAT--GTATCTGCCCACTTCCAGCGGGTTCCTGGAGGCCCTCTAAAT--------TCCCCTTCCCTCCAGAGTCATCTCCCAACACTGCT----------------GCTCCCAGGGTGGGACGCCTGCTGCTGCACCTC------------------------------------------CACACACGTGCACACA--CCCAGCCAGGTGCAGGCAGTGTGGGCAGTGCAGAGGGGACACCAGGGCTGGGGATT--------------AAGGAGTTCGTGT----TCGTGA--GCAGCCTGGAAAGCAGCA-GGGCTTCTGCAGGAGCCGCCCCTGCCCTCATCCCTGCCCAGTAGGGTTGAGGGGCTGGCTTAGATGTCACCCCAAGGCAAGGCTGTCCTTCTCAGAGGCTCCTTCCCAGCTCCC-----------CTGAGtgggtcagtcccttcccctctctgagcccctctttcctcttctgtaaaGCACACTCAGTGATG---TTGCTCAGAG----GATTGAAGGACAAAGAAAAACAACACAATGGACAGCAGGGATTTGC-AAACAGCCGGGTACTGTACCCAAGACAGGGTATTGCTGGTGATGTCTGATGGATGGGGAGTTGAAAGACCCAG--------------CTGTCACTGGGCAGCTGGGTCTGGTTCCCCTGAGTCATTTGTAATTCACCAACCCAGTCTACAGCAGCttattaagcacttattgtgtgccatgctccatgcaagggccaaagacacca---tgagcagagccagacccc-accctcaGTTTCGCCC--CATGGGATGGGG---TTAGCCAGATGA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33344598 1792 + 229590362 CCACGAGGTCTGGGCTGGCCTGGCCCCCACCAGTCACTGCACTCACCCGTCCTGGCTGggttgactcctcttcctccttcaagcttttctgtttaaacttccccttctcagagaatcttctccggccaccatcccccaatctaaattaggttctccctcctaagattctttctcaaatccatttcctttccttctgagtactttaa-gggagcaataatgacacactaacttgtg-aatttgtttagtagaatctttgggacagagagtttatctgattcgctccat---gctgcagccactagaacacagcccggaatgtagtgggtgctcagtgcagacttttgaaggagt------gagtAAGTGAGTGAAAGAACAACAA----------ACCCCTCTTGGTGCCCACCAGGTGCCAAGCTGAGACTGGGCCCTGGAGCTGGAGTCAAGATATGGACCTGGCCTCAGTGTGCTGGGCCCTAACGGATGAGTAGGAGTTCACTGAGCACTGAAGA--------------------------------TCTTTGCCTCTGGATGGCCCCTTCCCAGTCACCCCAAAAGGAAGCCCTTGTCCTTTCAAATGTGGTGAATGTGGTGGTTCAGATCGGTAGGTGTTCCTATGAATAggtaaggg-cccaggcctcaggtcagttgaacctgggtttgaatcctgattctgctcttggcacca---------gggcaggtcactgagatgctctgagcctTTCTACCTCCTGCTCCGGGATAAGGATCCCTTCATCCATGCTCACTTGAAGTCCTGCCCACCATGGTGGAGGCGGACAGGCTGCAATGCTCTCCCCTCTCAGTGAGGGAAAAACACCAGCTCAGGCAGCCAG-CAGCTGAGAATGCCAGGCAGAGCAAAGGTGTCCTGAGGGACGGACAGAACAAGGGCTCAAGAGCCTAGCCAAGGGTGAGGCCAGGGGAGGCTTCCTGGAGGAGGAGGCAAGTCAGACCTCTGTCTCTCTTACTCCCATGACTGTGGGTGCCTTTCTCCTCCTCCTCTCATTCGCTCTCTTTTCCAGCTCCTGTGCTGCTCATTTCCTTGTCTCAG--TCTCTCTGCCCTGACAGGAGCCCTGAGGGAAACACCCCCGTCCC---------ATATTTGCCCGCTTCCAGCAGGTTCATGGAGGCCCTCTAAAT--------TCCCCTTCCCCTCGAAGTCATCTCCCAACACTGCT----------------GCTCCCAGGGCTGGGTGCCTGCTGCTGCATCTC------------------------------------------CACACACGTGCACACA--CCCAGCCAGGTGCAGGTAGCGTGGGCAGTGCAGAGGGGACACCAGGGCTGGGGATT--------------AAGGAGTTAGTGT----TCGTAG--ATGGCCTGGAAAGCAGCA-GGGCTTCTGCAGGAGCTACCCCTTCCCTCACTCCTGCCCAGTAGGGTTGAGGGGCTGGCTTAGATGTCACCCCAAGCCAAGGCTGTCCTTCTCAGAGGCTCCTTCCCAGCTCCC-----------CTGAGtgggtcagtcccttcccctctctgagcccctctttcctcttctataaagcagactcagtgatg--cttgctcaaag----gtttgaaggacaaagaaaaatgacacaatggacagtggggatttgc-agacagccaggtactgtacCCAAGACAGGGTACTGCTGGTGATGTC-GATGGATGGGGAGTTGAAAGACCCAG--------------TTGTCACTGGGCAGTTGGGTCTGGTTCTCCTGAGTCA-TCGTAATTCACCAACCcagtctacagaagtttattaagcacctactgtgtgccatgctctatgcaagggccaaagacaccg---tgagcagagccagacccc-accctcagtttacccc--catggGATGGGG---TTAGCCAGATGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29855591 1792 - 227556264 CCACGAGGACTGGGCTGGCCTGGCCCCCACCAGTCACTGCACTCACCCGTCCTGGCTGggttgactcctcttcctccttcaagcttttctgtttaaacttcccctcctcagagaatcttctccggccaccatcccccaatctaaattaggttctccctcctaagattctttctcaaatccatttcctttccttctgagtactttaa-gggagcaataatgacacactaacttgtg-aatttgtttaatagaatctttgggacagagactttatctgattcgctccgt---gctgcagccactagaacacagcccggaatgtagtgggtgctcagtgcagacttttgaaggagt------gagtAAGTGAGTGAAAGAACAACAA----------ACCCCTCTTGGTGCCCACCAGGTGCCAAGCTGAGACTGGGCCCTGGAGCTGGAGTCAAGATATGGACCTGGTCTCAGTGTGCTGGGCCCTAACGGATGAGTAGGAGTTCACTGAGCACTGAAGA--------------------------------TCTTTGCCTCTGGATGGCCCCTTCCCAGTCACCCCAAAAGGAAGCCCTTGTCCTTTCAAATGTGGTGAATGTGGTGGTTCAGATCGGTAGGTGTTCCTATGAATAggtaaggg-cccaggcctcaggtcagttgaacctgggtttgaatcctgattctgctcttggcaccg---------gcgcaggtcactgagatgctctgagcctcTCTACCTCCTGCTCCGGGATAAGGATCCCTTCATCCATGCTCACTTGAAGTCCTGCCCACCATGGTGGAGGCAGACAGGCTGCAATGCTCTCCCCTCTCAGTGAGGGAAAAACACCAGCTCAGGCAGCCAG-CAGCTGAGAATGCCAGGCAGAGCAAAGGTGTCCTGAGGGACGGACAGAACAAGGGCTCAAGAGCCTAGCCAAGGGTGAGGCCAGGGGAGGCTTCCTGGAGGAGGAGGCAAGTCAGAGCTCTGTCTCTCTTACTCCCATGACTGTGGGTGCCTTTCTCCTCCTCCTCTCATTCGCTCTCTTTTCCAGCTCCTGTGCTGCTCATTTCCTTGCCTCAG--TCTCTCTGCCCTGACAGGAGCCCTGAGGGAAACACCCCCGTCCC---------ATATTTGCCCGCTTCCAGCAGGTTCATGGAGGCCCTCTAAAT--------TCCCCTTCCCCTCGAAGTCATCTCCCAACACTGCT----------------GCTCCCAGGGCTGGGTGCCTGCTGCTGCATCTC------------------------------------------CACACACGTGCACACA--CCCAGCCAGGTGCAGGTAGCGTGGGCAGTGCAGAGGGGACACCAGGGCTGGGGATT--------------AAGGAGTTAGTGT----TCGTGG--ATGGCCTGGAAAGCAGCA-GGGCTTCTGCAGGAGCTACCCCTTCCCTCACTCCTGCCCAGTAGGGTTGAGGGGCTGGCTTAGATGTCACCCCAAGCCAAGGCTGTCCTTCTCAGAGGCTCCTTCCCAGCTCCC-----------CTGAGtgggtcagtcccttcccctctctgagcccctctttcctcttctataaagcagactcagtgatg--cttgctcaaag----gtttgaaggacaaagaaaaatgacacaatggacagtggggatttgc-agacagccaggtactgtacCCAAGACAGGGTACTGCTGGTGATGTC-GATGGATGGGGAGTTGAAAGACCCAG--------------TTGTCACTGGGCAGTTGGGTCTGGTTCCCCTGAGTCA-TCGTAATTCACCAACCcagtctacagaagtttattaagcacctactgtgtgccatgctctatgcaagggccaaagacaccg---tgagcagagccagacccc-accctcagtttacccc--catggGATGGGG---TTAGCCAGATGA i macFas5.chr1 C 0 C 0 s calJac3.chr7 64593943 1788 + 155834243 CCACGAGGA-----CTGGCCTGGCCCCCACAGGTCCCTGTAGccccacatcctggctgggttgacttctcttcctccttcaaatttttctgtttaaacttcccctcctcagagaaccttctctggccaccatcctccaatctaaataaggttctccctcctaaggttctccctcaaatccatttcctttccttcccagcac-ttaacaggagcgataattacacactaccgtgtg-ggtttgtttaatagaatctttggggcagagactttgcctgattcgctcgat---gcagcagctgttacaacccagccctgaaggtggtgggtgctcagtgcagacttttgaaa----------gagtaagtGAGTGAAAGAACAATAA----------ACCCCTCTTGGTGTCCATGGGGTGCCAGGCTGGGGCTGGGTCCTGGGGCTGGAGTCAATGTGTGGATCTGGCCTCGGtgtgctgggctctaacagatgagaaggagtttgccaagcactgaaggtggggTTGATATGTCCATCTTCTGAGAGGCACTTCTTGCCTCTGGATGGCCCTTTCATAGTCACCCCAAATGGAAGCCCTTGCCCTTTCAAAAGTGGTGAATGCAGTGGTTCATATCAGTGGGTGTTCCTATGCATAGCTaagag-cccaggcctcaggtccgttgaacttgggattgaatcctgattctgctcttggtacca---------gggcaggtcactGTG---------------------------CTGGGATGAGGATCTCTTCATCCATGCCCACTCAAAGTCTTGCCCACCCTGATGGAGGTGGACAGGGTGCAATGCCTTCCCCTCTCAGTGGGGCAAAAACACCAGGTCAGGCAGCCAG-CACCCAAGAATGCCAGGCAAAGCAAGGGTGTCCTAAGGGACGGGCAGAATAAGGGCTCCAGAGCCCAGCCGAGGGTGAGGCCAGGGGAGGCTTCCTGGAGGAGGAGGCAAGCCAGAGCCCTCTGTCTCTTACTCCCGTGACTGGAGATGCCTTTCTCCTCCTCCTCTCATTCTCTCTC--TTCCAGCTCCTGCTCTGCTCATTTCCTCACCTCAG--TCTCTCTGCCCTGACAGGAGGCCTGA-GGACTCAGCCTCATTCCAAGGAAT--GTATCTGCCCCCTTCCAGCAGGTTGGTGGAGGTCCTCTAAAT--------TCCCCTTCCCCCCGAAGCCATCTTCCAACACTGCT----------------GCTCCCAGGGTGGGACACCTGCTGCCACACCTC------------------------------------------CACACACGTGCACACA--CCTGGCCAGGTGCAGGCAGTCAGGGCCGTGCAGAGGGGACACCAGGGCCGGGGAAT--------------AAGGAGTTAGTGT----CCATGA--GCAGCCTGGAAAGCAGCA-GGGCTTCTGCAGGAGCTACCCCTG-CCTCACCCCTGCCCAGTAGGGTTGAGGGGCTGGCTTGGATGTCACCCCAAGCCAAGGGTGTCCCTCTCAGAGGCTCCTTCCCAGCCCCC-----------CTGAGtaggtcaggcacttccccactctgagcctcttttttctcttctgtaaaGC--ACTCAGTGATG--CTTGTTCAGAG----GATTGAAGGACC---AAAAATGACTCAACGGACAGTGGAGATTTGCAAAACAGTCGGGAATTGTACTTGAGACAGGGTATCGCTAGTGATATCTGATGGATGGGG-GTTGAAAGACCCAG--------------TTGTTGCTGGGCAGCTGGGTCTGGTTCCCCTGAGTCATTCGTAATTCACCAACCcagtctacgaaagtttattaagcacctactgtgtcccatgctccatgcaagggccaaagacacca---taagcagagccagacccc-accctcaGTTTTCCCC--CATGAGATGGGG---TCAGCCAGATGA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14980009 1783 - 85426708 -------------ccttctctgaccaccatc------------------------------------------------------------------------------------------------------ccccattctaaattagtttctccctcctcagtttctccctcaaactgtttccctctccctcagagcac-ttat-cacaggtgcaattacacacgagtttgcg-ggtttgcttcatagactccttggcggaagggttttacctgatgggctctgt---cctgtagcccccag-atggggcatggaacatagtgggtgctcagtgcagacttcggaatgaatgggggggagggagggagggagggagggaggaggggaggaagACCCGTCCT-GTGCCCACCGTGTGCCAGGCTGAGGCCGGGCCCTGGAGCCAGAGGTGCAAAGTGGACACGGCCTCAGCTGGCTGGGCTCCAAGGCAC-AGTAGGAGTTTGCCTGGCCCTGAAGA-CGAGTGGACACGCTGGGACTCTAGAAGCC--CACCTATCTCCAGATGGCCTCTTCCCGGCCACCATGAGAAGAAGCTGTTGCCCTTTTGACAATGCTTAATTTAGTGGTTCATTTCAACGGCTGTTACTTCGAATAGGTCagagccccaggctcagggttagcccaacctggg-ctgaatcctgattctgctcttgacactgtgtgaccctgggcgggtccct---ccactctgagcc--tcagcatcctgtctgtgaaTAGATGACCACTGATTAGTGCTCA----AAGTCCTATTCACCACGAGGGAGGTT-----------ATG-TCTCCCCTCAGGGTGTGGGGAACACACCCAGGCA--CAGCCAGCCAGCTGGGAACCCCGGACAGAGCAAAGgtattggaagggtgacacagagtaagggctccaggagacagcccaaggacaggtcagggaaggcttcctggag---gaggCAGCTCACATGACTCGGT-----------ATGTGTACATGTGTGTATCTCCTCCTCCT---ATTCTCCGTCC-CTCCAAGAGCTGCTCTTCTCATTTCCTCACCACCGTCTCTCTCTGCCCCGACAGGAGGCCTGAGGGACACAACCCGGTTAC-AGGAATGCGTCTCTGCCCCCTGCAAGCAGATCCATGGC-CCCCTCTCAGTGCCGCCCCCCCCCCCCACCTCACACACACCTCCCAGAACTGCTTCCCTCCAATTTGGCAGCTCACGGGGCCAGATGCCTGCTGCTGCATCTCTCCAGacacacgcgcatgcacacacacacacatgcacacacgcacacacatgcacacaTGCCCAGCCCAGTGCAGGCAGC-TGGCCAGTGAGGAGGAGAAACCGGAGCTGTGGATTTACAGAGGCCCCTCCAGGGGTGAGAGTGGGCTCTTTGCTGCAGCCCAGAAAGCAGCACAGGCCCCTGCCGGGAC-ATGCCTCATTTCCTCCCTGCCT-GCTGGGTGGGTCGGCAGG---------------------AGGCTGGCTGTC-CAGATGCTCCTCCCCAGCCCCCTCTTGGCCCGGCTAAGtgggttagtccctgtgcctgtctgagccttcctttcctcatctgtaaaatgggctcggcagtgatcttcctgagagctgagaccaaatgaagaataaaaacggcacagtggacacacaggattggc-aaactgtagggtgctgtgcCCGCAAGACAGCACTGA----GGTGTCGGAGGGGTGGGA-GCTGAGAGACCCAGCTCCAAGCGCAGCTCTGTCACTCAGCTCCTGGGTCAGG--------------TCCTAATTCACCAacccattctacagatctttaccaagcccctacagtgtgccgtgcctcatacaaggggcaaggatgccatggtgagcaaagccagaccctggccctcagtgtcctcctctgtgaaatggggggatttcctggatgg i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e chlSab2.chr20 28137180 0 - 130588469 C e papAnu2.chr1 32620870 0 + 220367699 C a score=495410.000000 s hg38.chr1_KI270760v1_alt 25851 274 + 109528 CCTGAAGGCCTCTCCAGCCAGCTCAACCCCCTTAATCCAGAATTACTCCCTGTG-CCAGGCTGACGGTGTGGCCAGAGAGGCCAGGGCCTGGGAGGGGGCCT-GGCAGTGGGTGGTGGGAAGAGATGGAGTGGCTGTGTCAGGGGAAGGAGAGAGCAGGTTGTTCCTGTACAGGTTTCGCTCCTCGGATAGGGGGCTGCAATGACAGCTTCCAGGAAAGACCAGGCAAGTGCCTCA-CCCCATCCATTCTTGCTCACCCCTGCGGCCTCTTGGCCAA s panTro4.chr1 30461767 274 + 228333871 CCTGAAGGCCTCTCCAGCCAGCTCGACCCCCTTAATCCAGAATTACTCCCTGTG-CCAGGCTGATGGTGTGGCCAGAGAGGCCAGGGCCTGGGAGGGGGCCT-GGCAGTGGGTGGTGGGAAGAGATGGAGTGGCTGTGTTGGGGGAAGGAGAGAGCAGGTTGTTCCTGTACAGGTTTCGCTCCTCGGATAGGGGGCTGCAATGACAGCTTCCAGGAAAGACCAGGCACGTGCCTCA-CCCCATCCATTCTTGCTCACCCCTGCGGCCTCTTGGCCAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30049383 274 - 229942017 CCTGAAGGCCTCTCCAGCCAGCTCAACCCCCTTAATCCAGAATTACTCCCTGTG-CCAGGCTGACGGTGTAGCCAGAGAGGCCAGGGCCTGGGAGGGGGCCT-GGCAGTGGGTGGTGGGAAGAGATGGAGTGGCTGGGTTGGGGGAAGGAGAGAGCAGGTAGTTCCTGTACAGGTTTCACTCCTCGGATAGGGGGCTGCAATGACAGCTTCCGGGAAAGACCAGGCACGTGCCTCA-CCCCATCCATTCTTGCTCACTCCTGTGGTCTCTTGGCCAA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33346390 271 + 229590362 CCTGAGGGCCTCTCCAGCCAACTCTACCCCCTTAATCCAGAATTACTCTC--TG-CCAGGATGATGGTGTGTCCAGAGAGGCCGGGGCCTGGGAAGAGGCCT-GGCAGTGGGTGGTGGGAAGA-ATGGAGTGGCTGGGTTGCGGGAAGGAGAGAGCAGGTAGTTCCTGTACAGGTTTCCCTCCTCGGATAGGGGGCTGCAATGACAGCTTCCAGGAAAGACCAGGCACGTGCCTCA-CCCCATCCCTTCTTGCTCACCCCTACGGTCTCTTGGCCAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29857383 271 - 227556264 CCTGAGGGCCTCTCCAGCCAACTCTACCCCCTTAATCCAGAATTACTCTC--TG-CCAGGATGATGGTGTGTCCAGAGAGGCCGGGGCCTGGGAAGAGGCCT-GGCAGTGGGTGGTGGGAAGA-ATGGAGTGGCTGGGTTGCGGGAAGGAGAGAGCAGGTAGTTCCTGTACAGGTTTCCCTCCTCGGATAGGGGGCTGCAATGACAGCTTCCAGGAAAGACCAGGCACGTGCCTCA-CCCCATCCCTTCTTGCTCACCCCTACGGTCTCTTGGCCAA i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28137180 274 - 130588469 CCTGAGGGCCTCTCCAGCCAACTCTACCCCCTTAATCCAGAATTACTCTCTGTG-CCAGGATGATGGTGTGTCCAGAGAGGCCAGGGCCTGGGAGGAGGCCC-GGCAGTGGGTGGTGGGAAGA-ATGGAGTGGCTGGGTTGTGGGAAGGAGAGAGCAGGTAGTTCCTGTACAGGTTGCCCTCCTCAGATAGGGGGCTGCAAAGACAGCTTCCAGGAAAGACCAGGCACATGACTCACCCCCATCCCTTCTTGCTCACCCCTATGGTCTCTTGGCCGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64595731 274 + 155834243 CCTGAGGGCCTCTCCAGTCAGCTCAACCCCCTTGATCCAGAATTACTCCCTGTC-CCTGGCTGAGGGTGTGGCCAGAGAGGCCAGAACCTGGGAGGGGGCCTGGGCAGTGGGTGGTGGGAAGAGATGGAGTGTCTGGGT-GGGGGAAGGGAAGAGCAGGTAGTTCCCGTGCAGGGTTCACTCCTCAGTCAGGGGACTGCCATGGCAGCTTCCAGGAAAGACCAGGCATGTGCCTCA-ACCCATCCCTTCTTGCCCAGCCCTGTGGTCTCTTGGTCAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14981792 229 - 85426708 tccaggggtctctccagccagcccagagccttccatc------gactccctgaGCCCAGGCTTAGGGCACAGCCTGGG----------CTGACAAATGTCTG-GGCAGTGAAT--TGAGAAGA----------------CGCAGGTCGAGGAGGGGTGGTGGTTCCCACGCAGGTT--CACCCCCAGACA---------AATAAGAGTTTCCAGAGAAGGTGAAGCACATTCCCCA-CCCCACCCCTTC-TGTTCAGCCCAGCGACCTCCTGGTCTG i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I e papAnu2.chr1 32620870 0 + 220367699 C a score=1660685.000000 s hg38.chr1_KI270760v1_alt 26125 695 + 109528 TGGCTGCTGTGACCCTGTCCTCCTCTGGG----------------AATCTGGTCTCGGGGAGGAGCCCTGGACCCTGACATTGACTAGAAACCTGACCCCATGTCTGAGCAGAGAGCTCCC--ATCTCTCTGTGAGcagatggggaaactgaggacagggcggagagcggcttgcctgtggccacacagT-GACTGATGATGATTGGTTCCTGCTC------ATCTCGTGCTTCTGATGAAGAAACTTGAAATCATAATCCTaataataatcagcacatgggcatgtgctgtgtgccaggcacgcactgagcactttacaggtgagatttcatatcaccctcacaacccccctatggggtggatgccacgcttggccccattttacagatgaggaaactgaggtgcagagggagaaggggctcattcaaggttcc--ccccaaggacagtTCctctaactccccttagagcactttccccagtgggtatttgtatgttttggaattttttaaattaatatttgtccttcctgctggacactgggctccaggtggtcagtggaggtgtctgtttccctcccgatgccccgacgtaaacccagccccagcacagtgctcactgtgtaataggcactcgataaggatttatGAGAAAGGGTCAAATGAGGTTCAGAGAACTCTAAGGGAAACCAAGTCTCCCGCGGGAATTATGCCCACAACCAC--- s panTro4.chr1 30462041 695 + 228333871 TGGCTGCTGTGACCCTGTCCTCCTCTGGG----------------AATCTGGTCTCGGGGAGGAGCCCTGGACCCTGACATTGACTAGAAACCTGACCCCATGTCTGAGCAGAGAGCTCCC--ATCTCTCCGTGAGcagatggggaaactgaggacagggcggagagcggcttgcctgtggccacacagt-gaCTGATGGTGATTGGTTCCTGCTC------ATCTCGTGCTTCTGATGAAGAAACTTGAAATCATAATCCTaataataatcagcacatgggcatgtgctgtgtgccaggcacgcactgagcactttacaggtgagatttcatatcaccctcacaacccccctatggggtggatgccacgcttggccccattttacagatgaggaaactgaggtgcagagggagaaggggctcattcaaggtTCC--CCCCAAGGACAGTTCctctaactccccttagagcactttccccagtgggtatttgtatgttttggaattttttaaattaatatttgtccttcctgctggacattgggctccaggtggtcagtggaggtgtctgtttccctcccgatgccccgacgtaaacccagccccagtacagtgctcactgtgtaacaggcactcgataaggatttatGAGAAAGGGTCAAATGAGGTTCAGAGAACTCTAAGGGAAACCAAGTCTCCCGCAGGAAATGTGCCCACATCCAC--- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30049657 694 - 229942017 TGGCTGCTGTGACCCTGTCCTCCTCTGGG----------------AATCTGGTCTCGGGGAGGAG-CCTGGACCCTGACATTGACTAGAAAcctgaccccatgtctgagcagagagccccc--atctctccatgagcagatggggaaactgaggacagggcggagagcggcttgcctgtggccacacagcagacTGATGATGATTGGTCCCTGCTC------ATCTCGTGCTTCTGATGAAGAAACTTGAAATAATAATCCTaataataatcagcacgtgggcatgtgctgtgtgccaggcatgcactgagcactttacaagtgagatttcatgtcaccctcacaacctttctatggggtggatgccatgcttggccccattttacagataaggaaactgaggtgcagaaggagaaggggctcattcaaggtTCC--CCCCAAGGACAGTCCctctaactccccttagagcactttccccagtgcgtatttgtatgttttgg-attttttaaattaatatttgtccttcctgctggacattgtcctccaggtggtcagtggaggtgtctgtttccctcccgatgccccaatgtaaacccagccccagtacagtgctcactgtgtaataggcactcgataaggatttatGAGAAACAGTCAAATGAGGTTCAGAGAACTCTAAGGGAAACCAAGTCTCCCGCAGGAAATATGCTCACGTCCAC--- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33346661 687 + 229590362 TGGCTGCTGTGACCCTGCCCTCCTCTGGG----------------AATCTGGTCTTAGGGAGGAGCCCTGGACCCTGACATTGACTAGAAACCTGACCCCATCTCTGAGCAGAGAGCCTCC--ATCTCTCTGTGAGcagatggggaaactgaggacagggcggagagcagcttgcctgtggccacacagtggactgatgATGACTGGTTCCTGCTCTGCTCATGCTCGTGCTTCTGATGAAGAAACTTGAaataataatcctaacaatagccagcgtgtgggcatgtgctgtgt----------------gcactttagaggtgagatttcatgtcaccctcacaacctccctatggggtggatgccatgcttggtcccattttacagatgaggagactgaggtgcagagggagaagcggctcattcaaggtcCC-GCCCCAAGGACAGTCCctctaactccccttagagcactttccccagtgggtcattgcatgttttggattttttaaaattaatatttgtccttcctgctggacattggcctccaggtggtcagtggaggtgtctgtttccctcccgatgccctgatgtaaacccagccccagtacagtgctcactgtgtaacaggcactcgataaggatttatgagaaagagtcaaATGAGGTTCAGAGAACCCTTAGGGAAACCAAGTCTCCTGCAGGAAATATGCCCACATCCAC--- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29857654 687 - 227556264 TGGCTGCTGTGACCCTGCCCTCCTCTGGG----------------AATCTGGTCTTAGGGAGGAGCCCTGGACCCTGACATTGACTAGAAACCTGACCCCATCTCTGAGCAGAGAGCCTCC--ATCTCTCTGTGAGcagatggggaaactgaggacagggcggagagcagcttgcctgtggccacacagtggactgatgATGACTGGTTCCTGCTCTGCTCATGCTCGTGCTTCTGATGAAGAAACTTGAaataataatcctaacaatagccagcgtgtgggcatgtgctgtgt----------------gcactttacaggtgagatttcatgtcaccctcacaacctccctatggggtggatgccatgcttggtcccattttacagatgaggaaactgaggtgcagagggagaagcggctcattcaaggtcCC-GCCCCAAGGACAGTCCctctaactccccttagagcactttccccagtgggtcatagcatgttttggattttttaaaattaatatttgtccttcctgctggacattggcctccaggtggtcagtggaggtgtctgtttccctcccgatgccccgatgtaaacccagccccagtacagtgctcactgtgtaacaggcactcgataaggatttatgagaaagagtcaaATGAGGTTCAGAGAACTCTTAGGGAAACCAAGTCTCCTGCAGGAAATATGCCCACATCCAC--- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32620870 680 + 220367699 TGGCTGCTGTGACCCTGCCCTCCTCTGGG----------------AATCTGGTCTTGGGGAGGAGCCCTGGACCCTGACATTGACTAGAA-------TCCATCTCTGAGCAGAGAGCCCCT--ATCTCTCTGTgagcagatggggaaactgaggacagGGGGGAGAGCAGCTTGCCTGTGGCCACACAGCAGACTGATGATGACTGGTTCCTGCTCTGCTCGTGCTCGTGCTTCTGATGAAGAAACTTGAAATAATAATCCTAACAATAGCCAGCGCGTGGGCATGTGCTGTGT----------------GCACTTTACAGGTGAGATTTCATGTCACCCTCACAACCTCCCTATGGGGTGGATGCCATGCttggtcccattttacagatgaggaaactgaggtgcagagggAGAAGGGGCTCATTCAAGGTCCC-GCCCCAAGGACAGTCCCTCTAACTCCCCTTAGAGCACTTTCCCCAGTGGGTCATTgcatgttttggatttttttaaattaatatttgccCTTCCTGCTGGACATTGGCCTCCAGGTGGTCAGCGGAGGTGTCTGTTTCCCTCCCGATGCCCCGATGTAAACCCAGCCCCAGTACAGTGCTCGCTGTGTAACAGGCACTCGATAAGGATTTATGAGAAAGGGTCAAATGAGGTTCAGAGAACTCTTAGGGAAACCAAGTCTCCCGCAGGAAATATGCCCACATCCAC--- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28137454 686 - 130588469 TGGCTGCTGTGACCCTGTTCTCCTCTGGG----------------AATCTGGTCTCAGGGAGGAGCCCTGGACCCTGACATTGACTAGAAACCTGACCCCATCTCTGAGCAGAGAGCCCCC--ATCTCTCCGTGAGcagatggggaaactgaggacagggcagagagcagcttgcctgtggccacacagcggactggtgATGACT-GTTCCTGCTCTGCCCATGCTCATGCTTCTGGTGAAGAAACTCGAAATAATAATCCTAATAATAGCCAGCGCGTGGGCTTGTGCCGTGT----------------gcgctttacaggtgagatttcatgtcaccctcacaacctccctatggggtggatgccatgcttggtcccattttacagatgagaaaactgagatgcagagggagaaggggctcattcaaggtccc-gccccaaggacagtccctctaactccccttagagcactttccccagtgggtcattgcatgttttggattttttttaattaatatttgtccttcccactggacattggcctccaggtggtcagtggaggtgtctgtttccctcctgatgccccgatgtaaacccagtcccagtacagtgctcactgtgtaacaggcactcaataaggatttatGAGAAAGGGTCAAATGAGGTTCAGAGAACTCTTAGGGAAACCAAGTCTCCTGCAGGAAATATGCCCACATCCAC--- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64596005 696 + 155834243 TGGCTGCTGTGACTCTGTCCTTCTCTGGGAGCCTGGTCTCGGGGAAGCCTGGTCTCGGGGAGGAGCCCCAGGCCCTGACATTGACTAGAAACCTGACTCCATGTCTGAGCAGAGAGCCCCC-tatctctctgtgagcagatggggaaactgaagacagggaggagagcaacttgcctgtagccacacagccaactgatgATGACTGGTTTGTGCTT-----------GGGCTTCTGATGAAGAAAGTTGAAATAATAATC---ataatagccagtgtgtgggcatgtgctgtgtgccaggcacacactgagcactttacaggtgagatttcacgtcaccctcacaacctccttatgggatggatgccatgcctgaccccattttacagatgaggaaactgaggtgcagagggagaaggggctcatccaaggtcCTCACCCCCAGGACAGTCCCTCTAACTCCCCTCAGAGCACTTTCCCCAGTGGGTATTTGTATGTTTTGGAATTTTT-GAATTAATATTTGTCCTTCCTGCTGGGTGTTGGCCTCCAGGTAGTCAGTGGAGGTGTCTGCTTCCCTCCCAGGA----GTTGAAAACACAGCCCCAGCACAGCATTCATTGTGTAATAGGTGCTTGATAAGGATTCATGAGAAAGGGTCAAATGAGGTTCAGCAAAGTCTTAGGGAAACCAAGTCTCCCGCAGGCAATACGCCCAC--------- i calJac3.chr7 C 0 C 0 s canFam3.chr2 14982021 590 - 85426708 TGGCTGC--------------CCCCAGCG---------------------------GGGGAGGAGCCCAGGGACCTGCCA-GGACTCAGAGCTTGACCCCATGGCTGACTGGGGAGCTCCCTTACCCCTCCGGGTCCAGACAGGAAAGC--AGGACAGTGAGGAAGGCAGCTTGCA---------------AATTGGTGGCAATTAGTTCTTATTC-----ATGTGTATGCTTCTGATGAAGGCCCTTAAAATAATAATCATaataataaccagtgcgggggcatctactgtgtgtc-ggcgccagctggacac-ttgcaggtgagactttgcttcacgcc--caacctctccttg-------ctcaatgctg---ctcttttcacagatgagaagcccgagatgcagagagagatggggctggtccagggtcac--CCCCATGAgcg--ccctctactcccccagggacatcgctacactgcggg-----ggatgattt-----------aattcacacctgccctccccactggttctcgacccgcaggtggccagtgaccaggtctgcttcactgcccacaac--------accccagcgcc------------------cagcaggagctcaataa-aatttgtGAGAGAGGGGTAGG-------AAGAGATCTCTTAGGGAAATAGAGTCTCCCAGAGGAATTATCCCCCC---CACGTT i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I e nomLeu3.chr24 458899 251 - 28733288 I a score=507380.000000 s hg38.chr1_KI270760v1_alt 26820 176 + 109528 ATCCTGACTCCCAGCCCCGGCAGCAAGGC-AGCTCTGACTCTCGGCCCCTGCAGGCACTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGGGACTCACGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCAGGCTGGCTGAGCCCCATAAT s panTro4.chr1 30462736 176 + 228333871 ATCCTGACTCCCAGCCCCGGCAGCAAGGC-AGCTCTGACTCTTGGCCCCTGCAGGCACTGCCTCCCCATCCTCATGTATGCACAT------CTGCTAAGTGACTCACGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCAGGCTGGCTGAGCCCCATAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050351 176 - 229942017 CTCCTGCCTCCCATCCCCAGCAGCAGGGC-AGCTCTGACTCTCAGCCCCTGCAGGTGCTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGTGACTCACGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCTGGCTGGCTGAGCCCCATAAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459150 187 - 28733288 ACCCTGgc-cccagccccagcagcagggcaagccccgattcccagctcctgcTGGCACTGCCTCCCCATCCCCATGCACCCATATCCGCCACTGCTAAGTGACTGGCTGGCTGGCTCAGATGGAGTTAACAGCCCAAGTTGCAGCCCAAGGCC---TCTGCAGGACCTACCTGGTTGGCTGAGCCCTGTAA- i nomLeu3.chr24 I 251 C 0 s rheMac3.chr1 33347348 176 + 229590362 ATCCTGACTCCCAGTCCCGGCAGCAGGGC-AACTCTGACTCTCGGCCCCTGCGGGCACTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGGGCCTCAAGGGCTGGCTCAGAGGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCTGGCTGGCTGAGCCCTATAAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858341 176 - 227556264 ATCCTGACTCCCAGTCCCGGCAGCAGGGC-AACTCTGACTCTCGGCCCCTGCGGGCACTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGGGCCTCAAGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCTGGCTGGCTGAGCCCTATAAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32621550 176 + 220367699 ATTCTGACTCTCAGTCCCGGCAGCAGGGC-AACTCTGACTCTCGGCCCCTGCGGGCACTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGGGCCTCAAGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCTGGCTGGCTGAGCCCTATAAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138140 176 - 130588469 ATCCTGACTCCCAGTCCCGGCAGCAGGGC-AACTCTGACTCTCAGCCCCTGTGGGCACTGCCTCCCCATCCTCATGTGTGCACAT------CTGCTAAGGGCCTCAAGGGCTGGCTCAGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGGCTGGCTGGCTGAGCCCCATAAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64596701 175 + 155834243 GTCCTGACCCCCAGCCCTGGCTGCAGGGC-AGCTCCGACTCTCAGCTCCTGCTGGCACTGCCTCTCCATCCCCATGTGTGCACAC------ATGCTAAGTGACTCACGAACTGGCTTGGAAGGAGTTAACAGCCCAAGTCGC------TGGGT---TCTGCAAGGCCTGCCTGGCTGGCTGAGCCC-GTAAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14982611 131 - 85426708 ATCCTGCCCCCC--------TAGC--GGC-----------------------------TACCTCTCACTCTCCATCTGCCCACAT------CTGGT--GCTGCTGAGTGGCTGACACGGAAGGAGTTAATGGGCCACGTCCC------CGGATGGATTCCCAGGGCCTGCCAGGTGAGCTGAGC-------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25398878 219 - 156508116 I a score=330580.000000 s hg38.chr1_KI270760v1_alt 26996 124 + 109528 CAAGTCCTGCACAGGGGATAA--ACAGGCTGCTGGAGGATGGGCAGGCAGGGGTGGGGACCATCTCAAGAACCCTCTCAGGAGGCCTGTGCACTCCGAGGAGAGTCAAATGGACTCCCTCCCC---------TCc s panTro4.chr1 30462912 124 + 228333871 TAAGTCCTGCACAGGGGATAA--ACAGGCTGCTGGAGGATGGGCAGGCAGGGGTGGGGACCATCTCAAGAACCCTCTCAGGAGGCCTGTGCACTCCGAGGAGAGTCAAATGGACTCCCTCCCC---------TCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050527 124 - 229942017 TAAGTCCTGCACAGGGGATAA--ACAGGCTGCTGGAGGATGGGTAGGCAGGAGTGGGGACCATCTCAAGAACCCTCTCAGGAGGCCTGTGCACTCCGAGGAGAGTCAAAGGGACTCCATCCCC---------TCc i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459337 95 - 28733288 ----------------------------------------GGGTAAGCAGGGGTGGGAACCCTCTCAGGGACCCTCTCAGGAGGCCTGTGCACTCTGGGGGGAGTCAAAAGGACACCCTTCCCCTCCCGCATCCC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33347524 124 + 229590362 GAAGTCCTGCACAGGGGATAA--GCAGGCTGCTGGAGGGTGGGCAGGCAGGGGTGGGGACCATCTCGAGAACCCTCTCAGGAGGTCTGTGCACTCCGAAGAGAGTCAAAGGGACTCCTTCCCC---------TCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858517 124 - 227556264 GAAGTCCTGCACAGGGGATAA--GCAGGCTACTGGAGGGTGGGCAGGCAGGGGTGGGGACCATCTCGAGAACCCTCTCAGGAGGTCTGTGCACTCCGAAGAGAGTCAAAGGGACTCCTTCCCC---------TCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32621726 124 + 220367699 GAAGTCCTGCACAGGGGATAA--GCAGGCTGCTGGAGGGtgggcaggcaggggtggggaccATCTCGAGAACCCTCTCAGGAGGTCTGTGCACTCCGAAGAGAGTCAAAGGGACTCCTTCCCC---------TCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138316 123 - 130588469 GAAGTCCTGCACAGGGGATAA--GCAGGCTGCTGGAGGGTGGGCAGGCAGGGGTGGGGACCATCTCGAGAACCCTCTCAGGAGGTCTGTGCACTCCAAAGAGAGTCAAAGGGACTCCTT-CCC---------TCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64596876 123 + 155834243 TAAGTCCTGAGCAGAGGATAA--ACAGGCTGCTGGCGGTGGGGCAGGCAGGGGTGGGGACCATCTTGAGGACCCTCTCAAGAGGCCTGTGCACTCCAGGGAGAGTCAAA-GGACTCCTTCCTT---------GCc i calJac3.chr7 C 0 C 0 s mm10.chr4 25399097 118 - 156508116 CACATCCTTCGCAGGGCCTCATTACAGATGGCAGGATGGGTGGCTGGAAGG--------TCTTTGTAGGGACCCTTTTTAGAGGCTTGTGCACGCCAAGGAGAGAGAGAGTCTCTCCCTCTGC---------CCC i mm10.chr4 I 219 I 3172 s canFam3.chr2 14982742 75 - 85426708 --GGGCGTTTACACAGGA-----ACAGGCT-------------CAGGGAGGGGAGGTCACAGGCCCAAG----------GTAGAGCTG---------------------GGACCTGCGTCCCC---------TCC i canFam3.chr2 C 0 C 0 a score=113612.000000 s hg38.chr1_KI270760v1_alt 27120 47 + 109528 catgcgctggttcaaagcgccgc-------cgcattcttca-cccgccttcatct s panTro4.chr1 30463036 47 + 228333871 CGTgcgctggttcaaagcgctgc-------cacattcttca-cctgccttcatct i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050651 47 - 229942017 catgcactggttcaaagtgccgc-------cacattcttca-cctgccttcatct i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459432 47 - 28733288 CGTGCTCTGATTcaaagcaccac-------cacatccctca-cctctcttcatct i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33347648 54 + 229590362 CATGCGTGGCTTcagagcgctgcctttgaacacattcctca-cctcccttcatct i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858641 54 - 227556264 CATGCGTGGCTTCAGAGCGCTGCCTTTGAACACATTCCTCA-CCTCCCTTCATCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32621850 54 + 220367699 CATGCGTGGGTTCAGAGCGCTGCCTTTGAACACATTCCTCA-CCTCCCTTCATCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138439 54 - 130588469 CATGCGTGGGTTCAGAGCGCTGCCTTTGAACACATTCCTCA-CCTCCCTTCATCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64596999 47 + 155834243 catgtgctggttcaaagccccac-------tacatccctca-cctcccttcatct i calJac3.chr7 C 0 C 0 s canFam3.chr2 14982817 36 - 85426708 -----------TGTGAGTCCTGG-------GGCATCCTTCATCCTCCCCCCACC- i canFam3.chr2 C 0 I 93 e mm10.chr4 25399215 3172 - 156508116 I a score=347093.000000 s hg38.chr1_KI270760v1_alt 27167 127 + 109528 ttgaagcagcccgggggcaggctgctgtctcccacatgaggaagaggcccagggaggggaggcgacaggctcaaggccacgcagctgtttggtggtggagctggaccaagctctgccGGGGTGGTTG s panTro4.chr1 30463083 127 + 228333871 ttgaagcagcccgggggcaggctgctgtctcccacatgaggaagaggcccagggaggggaggcgaaaggctcaaggccacgcagctgtttggtagtggagctggaccaagctctgcTGGGGTGGTTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050698 127 - 229942017 ttgaagcagcccgggggcaggctgctgtctcccacatgaggaagaggcccagggaggggaggcgacaggctcaaggccacgcagctgtttggtggtggagctggaccaagctctgccGGGATGGTTG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459479 119 - 28733288 tgaaagcagccctggagcaggctgctgtctcccacatgaggaagaggcccagggaggagag------ggctcaaagccacgcagctg-ttggtggtggagctagACTGAGCTCTGTCAGG-TGGTTG i nomLeu3.chr24 C 0 I 73 s rheMac3.chr1 33347702 126 + 229590362 ttgaagcagcccagg-gcaggctgttgtctcccacatgaagaagaggcgcagcgaggggaagcgacaggctcaaggccatgcagctgtttggtggtgaagctggactAAGCTCTGCCCGGGTGGTTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858695 126 - 227556264 TTGAAGCAGCCCAGG-GCAGGCTGTTGTCTCCcacatgaagaagaggcccagcgaggggaagcgacaggctcaaggccatgcagctgtttggtggtgaagctggactaAGCTCTGCCCGGGTGGTTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32621904 126 + 220367699 TTGAAGCAGCCCAGG-GCAGGCTGTTGTCTCCCACATGAAGAAGAGGCCCAGCGAGGGGAAGCGACAGGCTCAAGGCCATGCAGCTGTTTGGTGGTGAAGCTGGACTAAGCTCTGCCCGGGTGGTTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138493 123 - 130588469 TTGAAGCAGCCCAGG-GCAGGCTGTTGTCACCCATAT---GAAgaggcccagcgagaggaggtgacaggctcaaggccatgcagctgtttggtggtgaagctggACCAAGCTCTGCCCGGGTGGTTG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64597046 126 + 155834243 ttgaagcagcccaggagcaggctgctgtctcccacatgaagaagaggcccagggatgggaggcgacaagctcaaggccacacagctgttgggttgtggagctggactgagctctgccAGG-TGGTGG i calJac3.chr7 C 0 C 0 e mm10.chr4 25399215 3172 - 156508116 I e canFam3.chr2 14982853 93 - 85426708 I a score=16769.000000 s hg38.chr1_KI270760v1_alt 27294 8 + 109528 TCAGGACA s panTro4.chr1 30463210 8 + 228333871 TCAGGACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050825 8 - 229942017 TCTGGACA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33347828 8 + 229590362 TCTGAACA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858821 8 - 227556264 TCTGAACA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32622030 8 + 220367699 TCTGAACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138616 8 - 130588469 TCTGAACA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64597172 8 + 155834243 TCTGAACA i calJac3.chr7 C 0 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14982853 93 - 85426708 I a score=1263863.000000 s hg38.chr1_KI270760v1_alt 27302 501 + 109528 CCGGCCCCGAtgtctcagcaagggttccagcaggacacagaagccatacag-----------ggaaagtttaatacaaagaattattaactgctacagtgggttggagtaacaaggggttcgttagtgagggtggcgggggcactatggaatacagaaacagccaatctgaagagcagccactgctcaggggctagagagggccaccaagggggaggccccacggctgaaacccaggccctgttggagagggcagagttgtggct-actgaatggacaggaagttgccatactgccacatgagtggaacttgctggaa--tctgccctccagaacttgtcaggaatctactctcta--ggatgccagagaaacaccatttacggggaggtgaatcacggaaggcacgtggctacagaaccacctgagggggttgctgggagttgc-----------------tgctggccactgggagttgctgaccactgtgcacagcaggagctgggcactggaggggctgcctacactgca s panTro4.chr1 30463218 501 + 228333871 CCGGCCCCGAtgtctcagcaagggttccggcaggacacagaagccccacag-----------gaaaagtttaatacaaagaattattaactgctacagtgggttggagtaacaaggggttagttagtaagggtgacgggggtactatggaatacagacacagccaatccgaagagcagccactgctcaggggctagagagggccaccaaggtggaggccccacggctgaaacccaggccctgttggagagggcagagttgtggct-actgaatggacaggaagttgccatactgccacatgagtggaactagctggaa--tctgccctccagaacttgtcaggaatctactctcta--ggatgccagagaaacaccgtttacagggaggtgaatcacggaaggcacgtggctacagaaccacctgagggggttgctgggagttgc-----------------tgctggccactgggagttgctgaccactgtgcacagcaggagctgggcactggaggggatgcctacactgta i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30050833 478 - 229942017 CCAGACCCGAtgtctcagcaagggttccagcaggacacagaagccagacag-----------ggaaagtttaatacaaagaattattaactgccacagtgggttggagtaataaggggttagttagtaagggtgacaggggcactatggaatacagaaacagtcaatctgaagagcagccactgctcaggggctaaagagggccaccaaggtggaggccccacggctgaaacccaagccctgttggagagggcagagttgtggct-actgaatggacaggaagttgccatgccgccacatgagtggaacttgct--------------------------------------------ggatgccagagaaacaccatttacagggaggtgaatcacggaaggcacgtggctacagaaccacctgagggggttgctgggagttgctgctggccactgggagttgctggccactgggagttgctgaccactgtgcacagcaggagctgggcactggaggggctgcctacactgta i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33347836 500 + 229590362 CCAGCCTGGAtgtctcagcaagggctccagcagcacacagaaaccacacag-----------ggaaagtttcatacagagaattattaactgctgcagtgggttggagtaacaaggggttagtcagtaagggtgacgggggcactacggaatacagaaacagccaatctgaagagcagccactgcccaggggctagagagggccaccaaggtggaggccccatggctgaaacccaggccctgctggagagggcatagttgtggct-actgaatggacaggaagctgacatgatgccacgtgagtggaacttgctggaa--tctgccctccagaacttgtcaggaatctactctcta--gggtgccagagaaacactatttacagagaggtgaatcactgaaggcacatggctacagaacca-ctgagggggttgctgggagttac-----------------tgctggccgctgggagttgctgaccactgtgcacagcaggagctgggcactggaggggctgcctacactgca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29858829 500 - 227556264 CCAGCCTGGAtgtctcagcaagggctccagcagcacacagaaaccacacag-----------ggaaagtttcatacagagaattattaactgctgcagtgggttggagtaacaaggggttagtcagtaagggtgacgggggcactacggaatacagaaacagccaatctgaagagcagccactgcccaggggctagagagggccaccaaggtggaggccccatggctgaaacccaggccctgctggagagggcatagttgtggct-actgaatggacaggaagctgacatgatgccacgtgagtggaacttgctggaa--tctgccctccagaacttgtcaggaatctactctcta--gggtgccagagaaacactatttacagagaggtgaatcactgaaggcacatggctacagaacca-ctgagggggttgctgggagttac-----------------tgctggcccctgggagttgctgaccactgtgcacagcaggagctgggcactggaggggctgcctacactgca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32622038 500 + 220367699 CCAGCCTTGATGTCTCAGCAAGGGCTCCAGCAGGACACAGAAGCCACACAG-----------GGAAAGTTTCATAAAGAGAATTATTAACTGCTGCAGTGGGTTGGAGTAACAAGGGGTTAGTCAGTAAGGGTGACGGGGGCACTACGGAATACAGAAACAGCCAATCTGAAGAGCAGCCACTGCCCAGGGGCTAGAGAGGGCCACCAAGGTGGAGGCCCCATGGCTGAAACCCAGGCCCTGCTGGAGAGGGCATAGTTGTGGCT-ACTGAATGGACAGGAAGCTAACATGATGCCACGTGAGTGGAACTTGCTGGAA--TCTGCCCTCCAGAACTTGTCAGGAATCTACTCTCTA--GGGTGCCAGAGAAACACTATTTACAGAGAGGTGAATCACTGAAGGCACATGGCTACAGAACCA-CTGAGGGGGTTGCTGGGAGTTAC-----------------TGCTGGCCGCTGGGAGTTGCTGACCACTGTGCACAGCAGGAGCTGGGCACTGGAGGGGCTGCCTACACTGCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28138624 500 - 130588469 CCAGCCCGGAtgtctcagcaagggctccagcaggacacagaagccacacag-----------ggaaagtttcatacagagaattgttaactgctgtagtgggttggagtaacaaggggttagtcagtaagggtgacgggggcactacggaatacagaaacagccaatctgaagagcagccactgcccaggggctagagagggccaccaaggtggaggccccacggctgaaacccaggccctgctggagagggcatagttgtggct-actgaatggacaggaagctgacatgatgccacgtgagtggaacttgctggaa--tctgccctccataacttgtcaggaatctactctcta--gggtaccaaagaaacaccatttacagagaggtgaatcactgaaggcacgtggctacagaaccc-ctgagggggttgctgggagttac-----------------tgctggctgctgggagttgctgaccattgtgcacagcagtagctgggcattggaggggctgcctacactgca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64597180 500 + 155834243 CCAGCCCAAACATCTCAGCAAgggtcccagcaggacacagaagccacacag-----------ggaatgtttaatacaaagaactgtgaactactacagtgggttggagtaacagggacttagccagtaagggcgaagggagcactatggaatacagaaacagccaatcagaagagcagccactgccccggggctggagagggccaccaaggtggaggcccaggggctgaaactcaggccttgttggagagggtacagttgtggct-actgaatggacaggaagttgccatgatgccatgtgagtggaacttgctggaa--tctgccctccaaatcttgccaggaatctactctctg--ggatgccag-ggaacaccctttacagggaggtaaatcactgaaggctcttggctacagaaccacctgagaggcttgctgggagatac-----------------agcttcccactgggagcagctcaccactgggcactgcaggagatgggcactgaagaggccacctaaactgca i calJac3.chr7 C 0 C 0 s canFam3.chr2 14982946 505 - 85426708 CCAGTCCACATG-CTAAGTGAAggtcccaccggaagacagaaaccacataggaatataaacaggaaagtttaacacaaagaatt-tgaactgcgacagtgggtcaggataacacgtgattagctagta----tgacgtgaacacgataggatcccaaaat-gcaaacacgaggggcagtcgttagctcaggctgagagagggcacccaaggaagagcccccaaggctgggatctagacccggacagagggggctcacttgtggctcactgagtggcagggaagtcactgtgatgccatgcacgtggaacttgctggaaagcctgccctccagatattgccagaaatccactctttagtggatgccatggaaa-gcagtttctagggaggtga--ctctggatgcccct-gctttgaaatcacctcagggggttgctgggagaagc-----------------agctggctgctgggtgctgccggctcctgtgcata-cagggttcgggtcctggagaagccccctgcacttca i canFam3.chr2 I 93 I 21 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I a score=284711.000000 s hg38.chr1_KI270760v1_alt 27803 160 + 109528 ggagctaggcatgagaaaggc--cgtgcactgcaggagttggacactagaggagccacccgggctgcaggagctgggcacagggaaagac----------------------------------cctgcactgcaggagctgtgcactggaggagccgcccacactgcaggagctgtgcactgaaggagccacccg s panTro4.chr1 30463719 126 + 228333871 ggagctaggcatgagaaaggc--cgtgcactgcaggagttggacactagaggagccacccgggctgcaggagctgggcacagggaaagac----------------------------------cctgcactgcaggagctgtgcactggaggagccgccc----------------------------------g i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30051311 136 - 229942017 ggagctaggcatgagaaaggc--cctgcactgcaggagTTGGACACTAGAGGAGCCACCCAGgctgcaggagctgggcacagggaaagac----------------------------------cctgcactgcaggagctgtgcactggaggagccgcccgcactgcagga------------------------ i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33348336 160 + 229590362 ggagctcggcatgggaaaggc--cctgcactgcaggagttggacactggaggagccacctgagctgcaggaGTGCAGCAGAgggaaagac----------------------------------cctacactgcaggagctgtgcaccggaggagccgcccgcactgcaggagctgtgcgccggaggagccgcccg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29859329 160 - 227556264 ggagctcggcatgggaaaggc--cctgcactgcaggagttggacactggaggagccacctgagctgcaggagtgcagcagagggaaagac----------------------------------cctgcactgcaggagctgtgcaccggaggagccgcccgcactgcaggagctgtgcaccggaggagccgccca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32622538 160 + 220367699 GGAGCTCGGCATGGGAAAGGC--CCTGCACTGCAGGAGCTGGACACTGGAGGAGCCACCTGAGCTGCAGGAGTGCAGCAGAGGGAAAGAC----------------------------------CCTGCACTGCAGGAGCTGTGCACTGGAGGAGCCGCCCACACTGCAGGAGCTGTGCACCGGAGGAGCCGCCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28139124 161 - 130588469 ggagctcggcatgggaaaggc--cctgcactgcaggagttggacaccagaggagccacctgagctgcaggagctctgcactggaggaggt---------------------------------gcctgcactgcaggaactgggcactggaggagccacccccactgcaggagctgtgcaccggaggagccgcccg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64597680 196 + 155834243 ggagctgggcaccggaggggccgcctgaacggcagaagctgggcaccggaggggccgcctgaactgcaggagctgggcactgaagaggccacctaactgcaggagctgggcaccggaggggccgcctgaacggcaggagcTGGGCACCAGAGGGGCCGCCTGAActgcaggagctgggcactgaagaggccaccta i calJac3.chr7 C 0 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14983451 21 - 85426708 I a score=61296.000000 s hg38.chr1_KI270760v1_alt 27963 64 + 109528 cactgcgggagctgggcactggaggagccacccgcactgcag------------------------------------------------------------------------------------------------------gagctgggcactggaggagcc--a s panTro4.chr1 30463845 64 + 228333871 cactgcaggagctgggcactggaggagccacccgcactgcag------------------------------------------------------------------------------------------------------gagctgggcactggagaagcc--a i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30051447 38 - 229942017 ----------gctgggcactggaggagccgcccacactgcag------------------------------------------------------------------------------------------------------gagccG------------------ i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33348496 63 + 229590362 cactgcaggacttgggcactggagaagtcatctgaactacag------------------------------------------------------------------------------------------------------aagctggacacaggggaagac--- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29859489 165 - 227556264 cactgcaggagctgtgcaccggaggagccgcccgcactgcaggagctgtgcaccggaggagccgcccgcactgcaggagctgtgcaccggaggagccgcccgcactgcaggacttgggcactggagaagtcatctgaactacagaagctggacacaggggaagac--- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32622698 64 + 220367699 CACTGCAGGAGCTGTGCACCGGAGGAGCCGCCCACACTGCAG------------------------------------------------------------------------------------------------------GAGCTGTGCACTGGAGGAGCCA-- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28139285 64 - 130588469 cactgcaggagctgggcactggaggaggtgcctgcactgcag------------------------------------------------------------------------------------------------------gagctgtgcaccagaggagcc-g- i chlSab2.chr20 C 0 I 203 s calJac3.chr7 64597876 62 + 155834243 -actgcaggagctgggcaccggaggggctgcctgaactgcag------------------------------------------------------------------------------------------------------gagctgtgcactggagaagcc--- i calJac3.chr7 C 0 I 1 s canFam3.chr2 14983472 33 - 85426708 CACAGC-------GAGTGCTGGAGAAACCACACGTGTCAC-------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr2 I 21 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I a score=10801.000000 s hg38.chr1_KI270760v1_alt 28027 8 + 109528 tctgaact s panTro4.chr1 30463909 8 + 228333871 tttgaact i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33348559 8 + 229590362 cctgcact i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29859654 8 - 227556264 cctgcact i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32622762 8 + 220367699 CCCGCACT i papAnu2.chr1 C 0 I 372 s chlSab2.chr20 28139552 8 - 130588469 cctgcact i chlSab2.chr20 I 203 C 0 s calJac3.chr7 64597939 8 + 155834243 cctgaact i calJac3.chr7 I 1 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14983505 0 - 85426708 C e ponAbe2.chr1 30051485 0 - 229942017 C a score=354840.000000 s hg38.chr1_KI270760v1_alt 28035 192 + 109528 gcaggagctgggcactgaggaag-gactggcattgcaggagctgggagctggtggggctgcctgtactacaggagctgggc-ctgggaatgctgtCTGCACAGGACCAAGGGAatgctagagaggccgcatg--tgccagaaggctgggtgctggggaagccacc--------tgtgctacaggacctgggacctaaggaagcc s panTro4.chr1 30463917 192 + 228333871 gcaggagcTGGGCACTGAGGAAG-GACTGGCgttgcaggagctgggagctggtggggctgcctgtactacaggagctgggc-ctgggaatgctgtCTGCACAGGACCAAGGGAatgctagagaggccacatg--tgccagaaggctgggtgctggggaagccacc--------tgtgctacaggacctgggacctgaggaagcc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30051485 167 - 229942017 --------------------------CCCGCACTGCAGGAGCTGGGAGTTGGTGGGACTGCCTGTACTACAAGAGCTGGGC-CTGGGAATGCTGTCTGCACAGGACCAAGGGAATGCTAGACAGGCCAcatg--tgccagaaggctggctgctggggaagccacc--------tgtgctacaggacctgggacctgaggaagcc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33348567 200 + 229590362 gcaggaactgggcactgaggaag-gactggcattgcaggagcTGGGAGCTGGTGGGGCTGCCTGCACTACAgaagctgggc-ctgggaatggtgtctgcacaggagcaagggaatgctagagaggccacatg--tgccagagggctgggtgctggggaagccaccagctcccaggtgctacaagacccgggagctgaggaagcc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29859662 200 - 227556264 gcaggaactgggcactgaggaag-gactggcattgcaggagctgggagctggtggggctgcctgcactacagaagctgggc-ctgggaatggtgtctgcacaggagcaagggaatgctagagaggccacatg--tgccagagggctgggtgctggggaagccaccagctcccaggtgctacaagacccgggagctgaggaagcc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32623142 200 + 220367699 GCAGGAACTGGGCACTGAGGAAG-GACTGGCATTGCAGGAGCTGGGAGCTGGTGGGGCTGCCTGCACTACAGGAGCTGGGC-CTGGGAATGGTGTCTGCACAGGAGCAAGGGAATGCTAGAGAGGCCACATG--TGCCAAAGGGCTGGGTGCTGGGGAAGCCACCAGCTCCCAGGTGCTACAGGACCTGGGAGCTGAGGAAGCC i papAnu2.chr1 I 372 C 0 s chlSab2.chr20 28139560 192 - 130588469 gcaggaactgggcactgaggaag-gactggcattgcaggagctgggagctggtggggctgcctgcactacaggagctgggc-ctgggaatggtgtctgcacaggagcAAGGGAatgctagagaggccacatg--tgccagagggctgggtgctagggaagccacc--------tgtgctacaggacctgggagctgaggaagcc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64597947 195 + 155834243 gcaggagctgggcactggagaagcttccggaaatgcaggagctgggcactggagaagcctcctaaaatgcaggagctgggcactggaggggccgcctgaactgcaggagcTGAGCACCAGAGGGGCCGCCTGAATGGCAg-gagctgggcactggagaagcctcc--------tgaactgcaggagctgagcactaaagaagcc i calJac3.chr7 C 0 I 3204 s canFam3.chr2 14983505 60 - 85426708 ----------------------------------------------------TGGGGCTGACTGT---------------------------------------------------------------------TGCCAAAACA-----TCCTTG------CACC------------CTAAGGGCCCTGGGCCCTGGGGAAGCC i canFam3.chr2 C 0 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I a score=3038137.000000 s hg38.chr1_KI270760v1_alt 28227 1505 + 109528 agtcctgcggccatagcctgcctaacccaggaagaaaccagaactaggaaggaaagctccctcctcttgcaatgtctctctgctgccctctactgaccacatttaatgtcatgccaaccgggaaatgaaaaatattcagagtggtacccatttccactttcacagatcaggcaacgaggcgtgaattggagctgagaggcaataaatttgtaactggcacGgtccacacct--gctcacctttcatagacacac-tctacacacatttggattcccatataa----cagcaacagaactctatcatttccatctcataagagacagctatctgtcttacaagggaacaagatccttctccaaaatgaggaggcacatgatcccaagactcattgcatccactgctggctataaatta----ctcctcaaattcagtcacagttcactgactattctgttactgaagactaaattgttaagttaacttccaaccacttgtatatagaataaaaatgggaaaaaggaaaaagaagaagaaagtagctagcatatgtaagtgaacacagacatagagtaagcaaattgaaaacatgcaaa-----------------ttttcctacttggtcctgaggtcatcattgatatgtatggctacctttccccacccttccttccatattccccccgccagcttccccgcccccagtctcaacccaaagctcagatggagatgtcagtattctccgctt-----ggtggagtcacccaaacctccattactgaaggctctg---------ctatccagccttcatttgggcagggagtaggttt-ctgtggttttccattaatctttactatgggacgtgggagcactaagaggcacctcagagaatcccctgatttcaagacggggtcttcttcc-----------------cgacactgcagcagcatcccagtctcccactggtaattgggagcaatcattccagacagcagattaacctctttcttccctgttggttcagtggcacaggccca-aaatggccaggtggcagt-ctcgttttctgattcagtggaaccattgctgtgt-------------ccctgggagctaagccctctaagccagcagagaacacagttgccacaatgtgaccaggaacaaagtccttgtgggtgggttattaggtgtcattgtggtaggagccacgccaccttctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagagacagcaccgtatcatggcctctggttcaaaacacactctgtgtcttgcaagaaagaacattatcttttcagggtgtggtctcccaattggcatcacaactgagacttcaggaagccattccacctttcagtcaggccagccacttccagatgtgtt-------------------------------------------------gtaagaccag--------------------ctaaccccacggactagagcctgtgaccacgcctcctctgctgtggcatgagctcccggatcagaggcagtgccatgagg-atgccatgatggcag--aagacattctgggagttcacggaaaatgatgccagaggaggaag s panTro4.chr1 30464109 1502 + 228333871 agtcctgcggccatagcctgcctaacccgggaagaaaccagagctaggaaggaaagctccctcctcttgcaatgtctctctgctgccctctactgaccacatttaatgtcatgccaaccggaaaatgaaaaatactcagagtggtacccatttccactttcacagatcaggcaacgaggcgtgaattggagctgagaggcaataaatttgtaactggcacGGTCCACACCT--GCTCACCTttcatagacacac-tctacacacatttggattcccatataa----cagcaacagaactctatcatttccatctaaaaagagacagctatctgtcttacaagggaacaagatccttctccaaaatgaggaggcacacgatcccaagactcattgcatccactgctggctataaatta----ctcctcaaattcagtcacagttcactgactattctgttactgaagactaaattgttaagttaacttccaaccacttgtatatagaataaaaatgggaaaaaggaaaaagaagaa---agtagctagcatatgtaagtgaacacagacatagagtaagcaaattgaaaacatgcaaa-----------------ttttcctacttggtcatgaggtcatcattgatatgtatggctacctttctccacccttccttccatattccccccgccagcttccccgcccccagtctcaacccaaagctcagatggagatgtcagtattctccgctt-----ggtggagtcacccaaacctccattactgaaggctctg---------ctatccagccttcatttgggcagggagtaggttt-ctgtggttttacattaagctttactatgggacgtgggagcactaagaggcacctcagagaatcccctgatttcaagacagggtcttcttcc-----------------ccacactgcagcagcatcccagtctcccactggtaattgggagtaatcattccagacagcagattaacctctttcttgcctgttggttcagtggcacaggccca-aaatggccaggtggcagt-ctcgttttctgattcagtggaaccattgctgtgt-------------ccctgggagctaagccctctaagccagcagagaacacagttgccacaatgtgaccaggaacaaagtccttgtgggtggattattaggtgtcattgtggcaggagccacgccaccttctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagagacagcaccgtatcatggcctctggttcaaaacacattctgtgtcttgcaagaaagaacattatcttttcagggtgtggtgtcccaattggcatcacaactgagacttcaggaagccattccacctttcagtcaggccagccacttccagatgtgtt-------------------------------------------------gtaagaccag--------------------ctaaccccacggactagagcctgtgaccacacctcctctgctgtggcatgagctcccagatcagaggcagtgccatgagg-atgccatgatggcag--aagacattctgggagttcacggaaaatgatgccagaggaggaag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30051652 1574 - 229942017 agtcctgaggccatagcctgcctaacccgggaagaaaccagaactaggaaggaaagctccctcctcttgcaatgtctctctgctgccctctactgaccacatttaatgtcatgccaaccggaaaatgaaaaatattcagagtggtacccatttccactttcacagatcaggcaacgaggcgtgaattggagctgagaggcaataaatttgcaactggcacGgtccacacct--gctcacctttcatagacacac-tctacacacatttagattcccatataa----cagcaacagaactctatcatttccgtctaataagagacagctatctgtcttacaagggaacaagatccttctccaaaatgagggggcacacgatcccaagactcattgcatccactgctggctgtaaatta----ctcctcaaattcagtcacagttcactgactattctgttactgaagactaaattgttaagttaacttccagccacttgtatatagaataaaaatgggaaaaaggaaaaagaagaagaaagtagctagcatatgcaagtgaacacagacatagagtaagaaaattgaaaacatgcaaa-----------------ttttcctacttggtcatgaggtcatcattgatatgtatggctacctttctccacccttccttccatattcctcctgccagcttccccgcccccagtctcaacccaaagctcagatggagatgtcagtattctccgctt-----ggtggagtcacccaaacctccattactgaaggctctg---------ctatccagccttcatttgggcagggagtaggttt-ctgtggttttccattaacctttactatgggacgtgggagcactaagaggcacctcagagaatcccctgatttcaagacagggtcttcttcc-----------------ccacactgcagcagcatcccagtttctcactggtaattgggagcaatcattccagacagcagattaacctctttcttgcctgttggttcagtggcacaggccca-aaatggccaggtggcagt-ctcgttttctgattcagtggaaccattgttgtgt-------------ccctgggaactaagccctctaagccagcagagaacacagttgccacaatgtgaccaggaacaaagtccctgtgggtgggttattaggtgtaattgtggcaggagccacgccaccctctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagagacagcaccgtatcatggccgctggttcaaaacatactctgtgtcatgcaagaaagaacatcatcttttcagggtgtggtctcccaactggcatcacaactgagacttcaggaagcctttccacctttcagtcaggccagccacttccagatgtgtctcccaactggcatcacaactgagacttcaggaagcctttccacctttcagtcaggccagccacttccagatgtgtgtgtctaaccccatggactagagcctgtgaccacacctcctgtgctgtggcatgagctcctagatcagaggcagtgccatgagg-atgccatgatggcag--aagacattctgggagttcacggaaaatgatgccagaggaggaag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33348767 1502 + 229590362 agtcctgctgccatagcctgcctaacccgggaagaaaccagaactaggaaggaacgctccctcctcctgcaatgtctctctgctgccctctactgaccacacttaatgtcatgccaactggaaaatgaaaaatattcagagtggtacccatttccactttcacagatcaggcaacgaggcgtgaattggagttgagaggcaataaatttgtaactggcaTGgtccacacct--gctcacctttcatagacacacttctacacatatttggattcccatataa----cagcaacagaactctatcatttccatgtaacaagagacagctatctgtcttacaagggaacaagatctttctccaaaatgaggaggcacatgatcccaagactcattgtatccactgctggctataaatta----ctcctcaaattcagtcacagttcactgactattctgttgctgaagactaaattgttaagttaacttccaaccacttgtatatagaataaaaatggggaaaaggaaagagaagaagaaagcagctagcatatgtaagtgaatactgacagagagtaagcaaattgaaaacatgcaaa-----------------ttttcctacttggtcatgaggtcatcactgatatgtatgaatacctttctccacctttccttccatattccccctgccaacttccccgcccccagtctcaactcaaagttcagatggagatgtcaggattcttcgctt-----ggtggagtcacccaaatctccattaccgaaggctctg---------ttacccaaccttcatttgggcggggagttggttt-ctgtgattttccattaacctttactatgggacatggaagcactgagaggcatctcagaaaatccc--gagttccagacagggccttcctcc-----------------ccacacggcagcagcatcccagtctcccactggaaattgggagcattcactccagacagcagattaacctctttcttgccggttggttcagtggcacaggccca-aaatggccaggtgacagt-ctcgttttctgattcagtggaaccatcgttgtgt-------------ccctgggaactaagcccttcaagccagcagagaacacagttgccacagtgtgaccaggaacaaagcccttgtgggtgggttattaggtgtaatcgtggcaggagccatgccaacttctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagaaacagcaccctatcattgtctctggttc--aacacactctgtgccttgcaagaacgaatgtcatcttttcagggtgtggtctcccaattggcaccacaactgagacttcaggaagccattccacctttcagtcaggccaggcacttccaggtgtgtt-------------------------------------------------gtgaaaccag--------------------ctaaccccacggactagagcctgtgaccacacctcctctgccacggcatgagcccctggatcagaggcagtgccatgagg-atgccatgatggcag--aaggcattctgggaatgcacggaagatgatgccagaggaggaag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29859862 1506 - 227556264 agtcctgctgccatagcctgcctaacccgggaagaaaccagaactaggaaggaacgctccctcctcctgcaatgtctctctgctgccctctactgaccacacttaatgtcatgccaactggaaaatgaaaaatattcagagtggtacccatttccactttcacagatcaggcaacgaggcgtgaattggagttgagaggcaataaatttgtaactggcaTGgtccacacct--gctcacctttcatagacacacttctacacatatttggattcccatataa----cagcaacagaactctatcatttccatgtaacaagagacagctatctgtcttacaagggaacaagatctttctccaaaatgaggaggcacatgatcccaagactcattgtatccactgctggctataaatta----ctcctcaaattcagtcacagttcactgactattctgttgctgaagactaaattgttaagttaacttccaaccacttgtatatagaataaaaatggggaaaaggaaagagaagaagaaagcagctagcatatgtaagtgaatactgacagagagtaagcaaattgaaaacatgcaaa-----------------ttttcctacttggtcatgaggtcatcactgatatgtatgaatacctttctccacctttccttccatattccccctgccaacttccccgcccccagtctcaactcaaagttcagatggagatgtcaggattcttcgctt-----ggtggagtcacccaaatctccattaccgaaggctctg---------ttacccaaccttcatttgggcggggagtaggttt-ctgtgattttccattaacctttactatgggacatggaagcactgagaggcacctcagagaatcccctgagttccagacagggccttcctcc-----------------ccacacggcagcagcatcccagtctcccactggaaattgggagcattcactccagacagcagattaacctctttcttgccggttggttcagtggcacaggccca-aaatggccaggtggcagt-cttgttttctgattcagtggaaccatcgttgtgt-------------ccctgggaactaagcccttcaagccagcagagaacacagttgccacagtgtgaccaggaacaaagcccttgtgggtgggttattaggtgtaatcgtggcaggagccatgccaacttctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagaaacagcaccctatcattgtctctggttcaaaacacactctgtgccttgcaagaacgaatgtcatcttttcagggtgtggtctcccaattggcaccacaactgagacttcaggaagccattccacctttcagtcaggccagccacttccaggtgtgtt-------------------------------------------------gtgagaccag--------------------ctaaccccacggactagagcctgtgaccacaactcctctgccacggcatgagcccctggatcagaggcagtgccatgagg-atgccatgatggcag--aaggcattctgggagtgcacggaagatgatgccagaggaggaag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32623342 1503 + 220367699 AGTCCTGCTGCCATAGCCTGCCTAACCCGGGAAGAAACCAGAACTAGGAAGGAACGCTCCCTCCTCCTGCAATGTCTCTCTGCTGCCCTCTACTGACCACACTTAATGTCATGCcaactggaaaatgaaaaatattcgaAGTGGTACCCATTTCCACTTTCACAGATCAGGCAACGAGGCGTGAATTGGAGTTGAGAGGCAATAAATTTGTAACTGGCATGGTCCACACCT--GCTCACCTTTCATAGACACACTTCTACACATATTTGGATTCCCATATAA----CAGCAACAGAACTCTATCATTTCCATGTAACAAGAGACGGCTATCTGTCTTACAAGGGAACGAGATCTTTCTCCAAAATGAGGAGGCACATGATCCCAAGACTCATTGTATCCACTGCTGGCTATAAATTA----CTCCTCAAATTCAGTCACAGTTCACTGACTATTCTGTTGCTGAAGACTAAATTGTTAAGTTAACTTCCAACCACTTGTATATAgaataaaaatggggaaaaggaaag---agaagaaagcagcTAGCATACGTAAGTGAACACTGACAGAGAGTAAGCAAATTGAAAACATGCAAA-----------------TTTTCCTACTTGGTCATGAGGTCATCACTGATATGTATGAATACCTTTCTCCACCTTTCCTTCCATATTCCCCCCGCCAACTTCCCCGCCCCCAGTCTCAACCCAAAGTTCAGATGGAGATGTCAGGATTCTTCGCTT-----GGTGGAGTCACCCAAATCTCCATTACCGAAGGCTCTG---------TTACCCAACCTTCATTTGGGCGGGGAGTAGGTTT-CTGTGATTTTCCACTAACCTTTACTATGGGACGTGGAAGCACTGAGAGGCACCTCAGAGAATGCCCTGAGTTCCAGACAGGGCCTTCCTCC-----------------CCACACGGCAGCAGCATCCCAGTCTCCCACTGGTAATTGGGAGCAATCGCTCCAGACAGCAGATTAACCTCTTTCTTGCCTGTTGGTTCAGTGGCACAGGCCCA-AAATGGCCAGGTGGCAGT-CTCGTTTTCTGATTCAGTGGAACCATCGTTGTGT-------------CCCTGGGAACTAAGCCCTTCAAGCCAGCAGAGAACACAGTTGCCACAGTGTGACCAGGAACAAAGCCCTTGTGGGTGGGTTATTAGGTGTAATCGTGGCAGGAGCCATGCCAACTTCTACCCCTTGTC-CCTGAGCCTGGGTGTTCTGACTC----------------TGCAGAAACAGCACCCTGTCATTGTCTCTGGTTCAAAACACACTCTGTGCCTTGCAAGAACGAATGTCATCTTTTCAGGGTGTGGTCTCCCAATTGGCACCACAACTGAGACTTCAGGAAGCCATTCCACCTTTCAGTCAGGCCAGCCACTTCCAGGTGTGTT-------------------------------------------------GTGAGACCAG--------------------CTAACCCCACGGACTAGAGCCTGTGACCACACCTCCTCTGCCACGGCATGAGCCCCTGGATCAGAGGCAGTGCCATGAGG-ATGCCATGATGGCAG--AAGGCATTCTTGGAGTGCACGGAAGATGATGCCAGAGGAGGAAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28139752 1503 - 130588469 agtcctgctgccatagcctgcctaacccgggaagaaaccagaactaggaaggaaagctccctcctcctgcagtgtctctctgctgccctctactgaccacacttaatgtcatgccaactggaaaatgaaaaatattcagagtggcacccatttccactttcacagatcaggcaacgaggcgtgaattggagttgagaggcaataaatttgtaactggcaTGgtccacacct--gctcacctttcatagacacacttctacacatatttggattctcatataa----cagcaacagaactctatcatttccatgtaacaagagacagctatctgtcttacaagggaacaagatctttctccaaaatgaggaggcacacaatcccaagactcattgtgtccactgctggctataaatta----ctcctcaaattcagtcacagttcactgactattctgttgctgaagactaaactgttaagttaacttccaacaacttgtatatagaataaaaatggggaaaaggaaag---agaagaaagcagctagcatatgtaagtgaacactgacagagagtaagcaaattgaaaacatgcaaa-----------------ttttcctacttggtcatgagatcatcactgatatgtatgaatacctttctccacctttccttccatattccccccgccaacttccccgcccccagtctcaactcaaagttcagatggagatgtcaggattcttcattt-----ggtggagtcacccaaatctccattaccgaaggctctg---------ttacccaaccttcatttgggtggggagtaggttt-ctgtgattttccattaacctttactatgggacgtggaagcactgagaggcacctcagagaatcccctgagttccagacagggccttcctcc-----------------ctacacggcagcagcatcccagtctcccactgctaattgggagcaatcgctccagacagcagattaaccactttcttgcctgttggttcagtggcacaggccca-aaatggccaggtggcagt-ctccttttctgattcagtggaaccattgttgtat-------------ccctgggaactaagcccttcaagccagcagagaacacagttaccacagtgtgaccaggaacaaagcccttgtgggtgggttattaggtgtaatcgtggcaggagccatgccaacttctaccccttgtc-cctgagcctgggtgttctgacta----------------tgcagaaacagcaccctatcatggtctctggttcaaaacacactctgtgccttgcaagaacgaatgtcatcttttcagagtgtggtctcccaattggcaccacaactgagacttcaggaagccattccacatttcagtcaggccagccacttccaggtgtgct-------------------------------------------------gtgagaccag--------------------ctaaccccacggactagagcctgtgaccacacgtcctctgccgcggcatgagcccctggatcagaggcagtgccgtgagg-atgcggtgacggcag--aaggcattctgggagtgcatggaagatgatgccagagggggaag i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14983565 1459 - 85426708 AGTGCTGTTGAAATAGCT--CCTGAGCAAGGGGG----------TTCAGGGGAAC-------CCAGCAgcggggtctgtccactgccccctactgaccacatttaccatcatgccaaatgggaaagggaaa-----------ggcgcccatttctatttccacaaactgagcaacgaagggtgccctggagctggga-gcagtaaCTCTGCAAGCGGCAAGGGCCACTCCTGGGTTACTCGTCCGTGTGCACGCGCGTGTCCACCTCTGAGCTTCCAGCGAAGCCGCAGCAGCAGAAAGC--GCGCCCGCACCGAAGGAGAGGCAGCTG--TGTCTTAC-AGCGAACGAGAT-TTCCTTCAAAATGAGGAGACCTGCAGTCCCGAGACTCATTGCCTCCACCGCCGGCTCTCACTTACTTGCTCCTCAAAGGCA-TCACAGTTCACTGGCCA-----------AAGACTAAATTGCCAAGTTAACTTGCAACCCCTTGTACATAAAATGAAAATGAGAAAAGG--------AGAAGGCAGTGGCCAGCATACAGAAGTAAACAGGGACGTGTAGCAGGCACGCTGAGagtacgcaaagctcctacaatcctcatctttcccac-tggccacggggccacggtcggtcgctcgggtttctttctcccgtcactcattccacctgccccccatca-----cccaccccc--tttcagccaaacgttcagagg-----gtcagggttcttcaccttgtgggggggggtgcctcaagtctttggaaccaaagaatctgagctacccatcgtccggcctttattt--gcagggag--ggtttgccgtggttttccgtgaaccatcactatggggtgtgggagtggtaagagacacctcgcagaa-cccctgact--cagacagagttctccttccctcctcctcccccccgccatttcatagcagcagcccagtgcccctttggcaatcgagatcagtccttccagaaagtagatgagcctctttcttgactgttggttcaacagtgtaagtccagaaatggccaggggacagtcctcatcttgcaagtcaatgggaccatcgatgggtgccctggtgcaagccttgggaaccgaagcctccgagccagcagggaaccaggccacca-----tgacaaggaccaa---ccctgggagagagttatcaggctcgatagtgataggaga-----------ctctctcttatctccggaccccaggtgtcctggctaccgggggggtggggagcggggggacagccccggacaatggtctcagattcacaacatattctgtgtcctgtaagagagag------------------------------------cacaactgaatctccact-agccgttccacctttccatgaggccagcca-ttccgggtacgtg-------------------------------------------------gcaagcccag--------------------ttaattccatgggtacgagccaatggctccacttccctcacc------tgagctccctgaccagaagcaatgccctgaggaacatcgtggtggtggctgagacatcctgggagctgatgg-aggtgatgctagaagaggaaa i canFam3.chr2 C 0 C 0 e mm10.chr4 25399215 3172 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I e calJac3.chr7 64598142 3204 + 155834243 I a score=877021.000000 s hg38.chr1_KI270760v1_alt 29732 397 + 109528 catgggcagggaagg-------caagttca-------cacccagaacatg------------gaggatgacactccatgccctccatgatgaaaaggtctgatgtcctcaacctgc-c-ccagatggcaggcag-------------------------------gtccttgcaggaaagggtgccacaccagggcctcagtgttggtctctgctgctggtggactaggcactgatcaatagcattagccagatcggctttgacaaggggcagcccatgctgctgagcctatgcccagcctcc-atcactgccaccacagccccttcgtccatggacccattgagcaaacact-agg-----------------gtgg---------ctgtgtggaaag--tcattttgtccatctgattattagggttctcacctgcagtggatgccctttagtgagcattcacttggaacacaaatattgtcac s panTro4.chr1 30465611 397 + 228333871 catgggcagggaagg-------caagttca-------cacccagaacatg------------gaggatgacactccatgccctccatgatgaaaaggtctgatgtccttaacctgc-c-ccagatggcaggcag-------------------------------gtccttgcaggaaagggtgccacaccagggcctcagtgttggtctctgctgctggtggactaggcactgatcaatagcattagccagatcggctttgacaaggggcagcccatgctgctgagcctatgcccagcctcc-atcactgccaccacagccccttcgtccatggacccattgagcaaacact-agg-----------------gtgg---------ctgcgtggaaag--tcattttgtccatctgattattagggttctcacctgcagtggatgccctttagtgagcattcacttggaacacaaatattgtcac i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30053226 399 - 229942017 catgggcagggaagg-------caagttca-------aacccagaacatg------------gaggatgactctccatgccctccatgatgaaaaggtctgatgtcctcaacctgc-c-ccagatggcaggcag-------------------------------gtctttgcagggaagggtgccacaccagggcctcagtgttgggctctgctgctggtggactaggcactgatcaatagcattagccagatcggctttgacaaggggcagcccatgctgctgagcctatgcccagcctccaatcactgccaccacagccccttcgtccaaggggccattgagcaagcactaagg-----------------gtgg---------ctgtgtggaaaa--tcattttgtccatctgattattagggttctcacctgcagtggatgccctttagtgagcattcacttgggacacaaatattgtcac i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33350269 397 + 229590362 catgggcagggaagg-------caagtcca-------tatgcagaacatg------------gaggatgactctccatgccctctatgatgaaaaggtctgatgtcctcaacctgc-c-tcagatggcaggcag-------------------------------gtctttgcagggaagggtgccacaccagggcctcagtgttggtctctgcagctggtggactaggcactgatcagtagcattagccagattggctttgacaaggggcagcccatgctgctgcgctcatgcccagcctcc-atcactgccaccacagcctcttcgtccatgggcccattgagcaagcacc-ggg-----------------gtgg---------ctgtgtggaaag--tcactttgtccatctgattattagggttttcacctgcagtggatgcccgttagtgagcattcacttgggacacaaatattctcac i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29861368 397 - 227556264 catgggcagggaagg-------caagtcca-------tatgcagaacatg------------gaggatgactctccatgccctctatgatgaaaaggtctgatgtcctcaacctgc-c-tcagatggcaggcag-------------------------------gtctttgcagggaagggtgccacaccagggcctcagtgttggtctctgctgctggtggactaggcactgatcagtagcattagccagattggctttgacaaggggcagcccatgctgctgcgctcatgcccagcctcc-atcactgccaccacagcctcttcgtccatgggcccattgagcaagcacc-ggg-----------------gtgg---------ctgtgtggaaag--tcactttgtccatctgattattagggttctcacctgcagtggatgcccgttagtgagcattcacttgggacacaaatattctcac i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32624845 397 + 220367699 CATGGGCAGGGAAGG-------CAAGTCCA-------TATGCAGAACATG------------GAGGATGACTCTCCATGCCCTCTATGATGAAAAGGTCTGATGTCCTCAACCTGC-C-TCAGATGGCAGGCAG-------------------------------GTCTTTGCAGGGAAGGGTGCCACACCAGGgcctcagtgttggtctctgctgctggtgGACTAGGCACTGATCAGTAGCATTAGCCAGATTGGCTTTGACAAGGGGCAGCCCATGCTGCTGCACTCATGCCCAGCCTCC-ATCACTGCCACCATAGCCTCTTCGTCCATGGGCCCATTGAGCAAGCACT-GGG-----------------GTGG---------CTGTGTGGAAAG--TCACTTTGTCCATCTGATTATTAGGGTTCTCACCTGCAGTGGATGCCCATTAGTGAGCATTCACTTGGGACACAAATATTCTCAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28141255 396 - 130588469 catgggcagggaagg-------caagccca-------tatgcagagcatg------------gaggatgactct-catgccctctaggatgaaaaggtctgatgtcctcaacctgc-c-tcacatggcaggcag-------------------------------gtctttgcagggaagggtgccacaccagggcctcagtgatggtctctgccgctggtggactaggcactgatcagcagcattagccagatcggctttgacaaggggcagcccatgctgctgcgctcatgcccagcctcc-atcactgccaccacagcctcttcgtccatgggcccattgagcaagcact-ggg-----------------gtgg---------ctgtgtggaaag--tcactttgtccatctgattattagggttctcacctgcagtggatgccctttagtgagcattcacttgggacacaaatattctcac i chlSab2.chr20 C 0 C 0 s mm10.chr4 25402387 420 - 156508116 CATGGCCAGGGAAAGGTCAATCCGAGCCCATAGCTTCTATCCATAA-AGG------------AAGAGTGAGTCC-CACCTCCTCCGTGATGAAGAGATCTCCCACAGTCTACCTACTC-TGAGACAGTGAGCAGCTccctcccaagaccctcccagaccctcccaggccctcccagaagtggtctaatatcagggtgtcagtggtagcctcttctggtag----------acaggtcatcactgtgagccaggtcatcttcaacaagtagcagcctgtgctgaggagtccctgcagagcctct-gcccctgtcactacaacccctgtgtccacg-------tagacaagcac--agg-----------------gtgg---------atgTGCAGAAAC--CGCttttgtctgctggattatca-ggtccccatctccagcgaggg--ctttagtgagtcttcacatgagatacaaatatcttcca i mm10.chr4 I 3172 C 0 s canFam3.chr2 14985024 404 - 85426708 ggtgggcgaggaaga-------caaatcca-------ggtccagagcaagccctgttgcaatgaggatgaatctccagcccctccatgagggacaggtgccatgtaaccaacttgc-cactaggtgggacacag------------------------------------------------cgccatgcccaggccccagtgttggtccccgctggtggtggatcaggctcccatcagtagccttagccaggtcatccttgatgaggggcagcacaggccaaagagcccaagcacagcctcc-aagtctgccaccat-gacactccgttcaggtgcccac--agcaagcact-gggggcttggtgggtgggttgtggggagaaagcctgtgtggagggtatcacatggtccccctgattacgtgggacctcatccacagttcgttcc--------------cacaggacacacaagtatcttcac i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 459598 73 - 28733288 I e calJac3.chr7 64598142 3204 + 155834243 I a score=113390.000000 s hg38.chr1_KI270760v1_alt 30129 53 + 109528 cacttgtggccattctgaggtccagctacacacctcttccccacacttcctca s panTro4.chr1 30466008 53 + 228333871 cacttgtggccattctgaggtccagctacacacctcttccccacacttcctca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30053625 53 - 229942017 cactggtggccgttctgaggtccagctacacacctcttccccacactttctca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33350666 53 + 229590362 cacttgtggccattctgagatccagctacacacctcttccccatacttcctca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29861765 53 - 227556264 cacttgtggccattctgagatccagctacacacctcttccccatacttcctca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32625242 53 + 220367699 CACTTGTAGCCATTCTGAGATCCAGCTACACACCTCTTCCCCATACTTCCTAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28141651 53 - 130588469 cacttgtggccattctgagatccagctacacacctcttccccatacttcctca i chlSab2.chr20 C 0 C 0 s mm10.chr4 25402807 51 - 156508116 caaatgtggcctctctgaggtctggc--cgcagctcctccctaggcttccACA i mm10.chr4 C 0 I 13 e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14985428 0 - 85426708 C e calJac3.chr7 64598142 3204 + 155834243 I a score=109792.000000 s hg38.chr1_KI270760v1_alt 30182 58 + 109528 ccaccaggctccagccctgttccttccgagtccccgatcaccagccaaacatttgtcc s panTro4.chr1 30466061 58 + 228333871 ccaccaggctccagccctgttccttccgagtccccgatcaccagccaaacatttgtcc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30053678 58 - 229942017 ccaccaggctccagccctgttccttccaagtccccgatcgccagccaaacatttgtcc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33350719 58 + 229590362 ccaccaggctccagccctgttccttgcgagtctccgatcaccagccaaacatttgtcc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29861818 58 - 227556264 ccaccaggctccagccctgttccttgcgagtctccgatcaacagccaaacatttgtcc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32625295 58 + 220367699 CCACCAGGCTCCAGCCCTGTTCCTTGCAAGTCTCCGATCACCAGCCAAACATTTGTCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28141704 58 - 130588469 ccaccaggctccagccctgttccttccgagtctccgatcaccagccaaacatttgtcc i chlSab2.chr20 C 0 C 0 e mm10.chr4 25402858 13 - 156508116 I e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14985428 0 - 85426708 C e calJac3.chr7 64598142 3204 + 155834243 I a score=43849.000000 s hg38.chr1_KI270760v1_alt 30240 22 + 109528 atgcacatgagtccatgtagac s panTro4.chr1 30466119 22 + 228333871 atgcacatgagtccatgtagac i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30053736 22 - 229942017 atgcacatgagcccatgtagac i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33350777 22 + 229590362 atgcacatgagcccatgtagac i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29861876 22 - 227556264 atgcacatgagcccatgtagac i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32625353 22 + 220367699 ATGCACATGAGCCCATGTAGAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28141762 20 - 130588469 atgcac--gagcccatgtagac i chlSab2.chr20 C 0 C 0 s mm10.chr4 25402871 22 - 156508116 GTGCGCATAAACCCTGGTGGAG i mm10.chr4 I 13 C 0 e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14985428 0 - 85426708 C e calJac3.chr7 64598142 3204 + 155834243 I a score=2456053.000000 s hg38.chr1_KI270760v1_alt 30262 991 + 109528 ccta---tcctctggccttctctcactttggactcagtggaaaaccaaatgtgctattcaaaatcttgagaggatttcccttcaccagggtccttcaaggtcaccccagtgtggggccatagtgggacagctgtccactttagggtga-taccagcccactgtgcagactcatatgtcaaccagactcaagttccttattcctcagtcagcacctcaggaggagaagg---agg---------------aacgccctcctcccagtcctgaggaacacccaggagcatctgctggggcggggagatgcagcaggggctagttttgaaagactctgaaccacctgcccatgcctcttactcatactttcccaatctccttgaacctatctc-ttacctcttctatttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtaccatatttagatgttcagtctctaccaaagcccagtagcaagccaggagccatttctcaaaaggaacgctgttatctgcaaaagagggcgtagac-tgctccaaaatctcctataagtctgaactgggcttcccctattggtgctggccaggggttctatacagcaccctgtttgccatagatgctttgagtatggtgaaatctgctgggtcataagctccaagtggtggagcagcttgtgccgcagtctgaatgaacttgctgcagagccttctcctgatctggtttccactcaaagctaacagcccctccctggggcagcaggcccctgcgttatcgtgggactggtttcccaccctctacttggcatctgtcttaccagggaatctgatgtgcttgctacatcctgttcctgggatccaatccacatg----tgattaatgtagga--gaccagtgtg-cattttgtaaaatgtacagacaa--gcaagttcgctgcagactaTCACTGACACATCAGGGGACTC-GCTCAGA s panTro4.chr1 30466141 991 + 228333871 ccta---tcctctggccttctctcactttggactcagtggaaaaccaaatgtgctattcaaaatcttgagaggatttcccttcaccagggtccttcaaggtcaccccagtgtggggccatagtgggacagctgtccactttagggtga-taccagcccactgtgcagactcatatgtcaaccagactcaagttccttattcctcagtcagcacctcaggaggagaagg---agg---------------aatgccctcctcccagtcctgagaaacacccaggagcatctgctggggcagggagatgcagcaggggctagttttgaaagactctgaaccacctgcccatgcctcttactcataccttcccaatctccttgaacctatctc-ttacctcttctatttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtaccatatttagatgttcagtctctaccaaagcccagtagcaagccaggagccatctctcaaaaggaacgctgttatctgcaaaagagggcgtagac-tgctccaaaatctcctataagtctgaactgggcttcccctattggtgctggccaggggttctatacagcaccctgtttgccataggtgctttgagtatggtgaaatctgctgggtcataagctccaagtggtggagcagcttgtgctgcagtccgaatgaacttgctgcagagccttctcctgatctggtttccactcaaagctgacagcccctccctggggcagcaggcccctgcgttatcgtgggactggtttcccacactctacttggcatctgtcttaccagggaatctgatgtgcttgctacatcctgttcctgggatccaatccacatg----tgattaatgtagga--gaccagtgtg-cattttgtaaaatgtacagacaa--gcaagttcactgcagactaTCACTGACACATCAGGGGACTC-GCTCAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30053758 991 - 229942017 ccta---tcctctggccttctctcatgctgggctcagtggaaaaccgaatgtgctattcaaaatcttgagaggatttcccttcaccagggtccttcaaggtcaccccagtgttgggccatagtgagacagctgtccgctttagggtga-taccagcccactgtgcagactcatctgtcaaccagactcaagttccttattcctcagtcagcacctcaggaggaggagg---agg---------------aacaccctcctcccagtcatgaggaacacccaggagcatctgcgggggcggggagacgcagcaggggctagttttgaaagactctgaaccacctgcccatgcctcttactcataccttcccgatctccttgaacctatctc-ttacctcttctatttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtaccatatttagatgttcagtctctaccaaagccccgtagcaagccaggagccatttctcaaaaggaacgctgttaactgcaaaagagggcatagac-tgctccaaaatctcctataaatctgaactgggatttccctattggtgctggccaggggttctatacagcaccctgtttgccacagatgctttgagtatggtgagatctgctgggtcataagctccaagtggtggagcagcttgtgctgcagtctgaatgaacttgttgcagagccttcttctgatctggtttccactcaaagctgacagcccctccctggggcagcaggcccctgcgttattgtgggactggtttcccacactctacttggcatctgtcttaccagggaatctgatgtgcttgctacatcctgttcctgggatccaattcacatg----tgattaatgtagga--gaccagtgtg-cattttgtaaaatgtacagacaa--gcaagttcgctgcagactaTCACTGACAcatcaggggactt-gctcaga i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33350799 993 + 229590362 ccta---tcctctggccttctctcactctaggctcagtggaaaaccaaatgtgctattcaaaatcttgagaggatttcccttcaccagggcccttcaaggtcacccctgtgtggggccatagtgggacagctgtccactttagggtgg-taccagcccactgtgcagattcatctgtcaaccagactcaagttctttattcctcagtcagcacctcaggaggaggaggaggagg---------------aacaccctcctcccagtcataaggaacacccaggagcatctgcaggggcggggagatgcagcaggagctggtttggaaagactctgaaccatctgctcatgcctcttactcataccttcccgatctccctgaacctatctc-ttacctcttctatttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtcccatatttagatgttcagtctctaccaaagcccagtagcaagccaggagccatttctcaaaaggaacgctgttatctgcaaaagagggcatagac-tgctccaaaatctcctataagtctaaattgggattcccctattggtgctggccaggggtt-tacacagcaccctgtgtgccacagatgctttgagtatggtgagatctgctgggtcataagctccaagtggtggagcagcttgtgctgcagtctgaatgaacttgctgcagagccttctcttgatctggtttcccctcaaagctgacagcccctccctggggcagcaggcccctgcgttattgtgggactggttccccacactctacttggcatctgtcttaccaaggaatctgatgtgcttgctacatcctgttcctgggatcctatccacatg----tgattaatgtagga--gaccagtgtg-cattttgtaaaacgtacagacaa--gcaagttcgctgcagactGTCACTGACACACCAGGGGACTC-GCTCAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29861898 993 - 227556264 ccta---tcctctgggcttctctcactctaggctcagtggaaaaccaaatgtgctattcaaaatcttgagaggatttcccttcaccagggcccttcaaggtcacccctgtgtggggccatagtgggacagctgtccactttagggtgg-taccagcccactgtgcagattcatctgtcaaccagactcaagttctttattcctcagtcagcacctcaggaggaggaggaggagg---------------aacaccctcctcccagtcataaggaacacccaggagcatctgcaggggcggggagatgcagcaggagctggtttggaaagactctgaaccatctgctcatgcctcttactcataccttcccgatctccctgaacctatctc-ttacctcttctatttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtcccatatttagatgttcagtctctaccaaagcccagtagcaagccaggagccatttctcaaaaggaacgctgttatctgcaaaagagggcatagac-tgctccaaaatctcctataagtctaaattgggattcccctattggtgctggccaggggtt-tacacagcaccctgtgtgccacagatgctttgagtatggtgagatctgctgggtcataagctccaagtggtggagcagcttgtgctgcagtctgaatgaacttgctgcagagccttctcttgatctggtttcccctcaaagctgacagcccctccctggggcagcaggcccctgcgttattgtgggactggttccccacactctacttggcatctgtcttaccaaggaatctgatgtgcttgctacatcctgttcctgggatcctatccacatg----tgattaatgtagga--gaccagtgtg-cattttgtaaaatgtacagacaa--gcaagttcgctgcagactGTCACTGACACACCAGGGGACTC-GCTCAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32625375 983 + 220367699 CTTA---TCTTCTGGCCTTCTCTCACTCTAGGCTCAGTGGAAAACCAAATGTGCTATTCAAAATCTTGAGAGGATTTCCCTTCACCAGGGCCCTTCAAGGTCACCCCTGTGTGGGGCCATAGTGGGACAGCTGTCCACTTTAGGGTGG-TACCAGCCCACTGTGCAGATTCATCTGTCAACCAGACTCAAGTTCTTTATTCCTCAGTCAGCACCTCAGGAGGAGGAGG-------------------------CCCTGCTGCCAGTCATAAGGAACACCCAGGAGCATCTGCAGGGGCGGGGAGATGCAGCAGGAGCTGGTTTGGAAAGACTCTGAACCATCTGCCCATGCCTCTTACTCATACCTTCCCGATCTCCCTGAACCTATCTC-TTACCTCTTCTATTTGCTAGGTTGTGCTCACCTGACCTTATGGTTAGACAATACCAAGTTCAAGATGGGAAGCTC--AGGTTGCATGGTCACCTGATGTCCCATATTTAGATGTTCAGTCTCTACCAAAGCCCAGTAGCAAGCCAGGAGCCATTTCTCAAAAGGAACGCTGTTATCTGCAAAAGAGGGCATAGAC-TGCTCCAAAATCTCCTATAAGTCTAAATTGGGATTCCCCTATTGGCGCTGGCCAGGGGTT-TATACAGCACCCTGTGTGCCACAGATGCTTTGAGTATGGTGAGATCTGCTGGGTCATAAGCTCCAAGTGGTGGAGCAGCTTGTGCTGCAGTCTGAATGAACTTGCTGCAGAGCCTTCTCTTGATCTGGTTTCCCCTCAAAGCTGACAGCCCCTCCCTGGGGCAGCAGGCCCCTGCGTTATTGTGGGACTGGTTCCCCACACTCTACTTGGCATCTGTCTTACCAAGGAATCTGATGTGCTTGCTACATCCTGTTCCTGGGATCCTATCCATATG----TGATTAACGTAGGA--GACCAGTGTG-CATTTTGTAAAATGTACAGACAA--GCAAGTTCGCTGCAGACTGTCACTGACACACCAGGGGACTC-GCTCAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28141782 993 - 130588469 ccta---tcctctggccttctctcactctaggctcagtggacaactaaatgtgctattcaaaatcttgagaggatttcccttcaccggggcccttcaaggtcacccccgtgtggggccatagtgggacagctgtccactttagggttg-taccagcccactgtgcagattcatctgtcaaccagactcaagttctttattcctcagtcagcacctcaggaggaggaggaggagg---------------aacaccctcctcccagtcataaggaacacccaggagcatctgcaggggcggggagatgcagcaggagctggtttggaaagactctgaaccatctgcccgtgcctcttactcataccttcccgatctccctgaacctatctc-ttacctcttctgtttgctaggttgtgctcacctgaccttatggttagacaataccaagttcaagatgggaagctc--aggttgcatggtcacctgatgtcccatatttagatgttcagtctctaccaaagcccactagcaagccaggagccatttctcaaaaagaacgctgttatctgcaaaagagggcatagac-tgctccaaaatctcctataagtctaaactgggattcccctattggtgctggtcaggggtt-tatacagcatcctgtgtgccacagatgctttgaatatggtgagatctgctgggtcataagctccaagtggtggagcagcttgtgctgcagtatgaatgaacttgctgcagagccttctcctgatctggtttcccctcaaagctgacagcccctccctggggcagcaggcccctgcgttattgtgggactggttccccacactctacttggcatctgtcttaccaaggaatctgatgtgcttgctacattctgttcctgggatcctatccacatg----tgattaatgtagga--gaccagtgcg-cattttgtaaaatgtacagacaa--gcaagttcgctgcagactGTCACTGACACACCAGGGGACTC-GCTCAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64601346 1005 + 155834243 cctg---tcctctggccttctctcactctgaactcagtggaaaaccaaatgtg-tattcaaattcttgggaggatttcccttcaccggggcccttcgaggtcatccctgtgtggggccatagtgggacagctgtccgcttta-ggtgg-taccagcccactgtgcagactcatctgtcaaccaggctcaagttctttattcctcagtcagcaccttaagaggaggaggaggaggaggaagaggaggaaaaacgccctcctcctagtcataaggaacacccatga-catccgcagggacagggagatgcagcagaagctggtttcaaaagactctgagccacctacccatgccacttgcttgtgccttcct-atctccctgaacccatctc-ttacctctttcatctgctaggttgtgctcacccgaccttatggtgagacaatgccaagttcgagatgggaagctc--aggttgcatggtcatctgatgtcccaaatttagatgttcagtctctaccaaagcccaatagcaagccaggagtcatttctcaaaagaaacgctgttatctgcaaaagagggcattgac-tgctccaaaatctcctataggtctgcatggggattcccctcttggtactggccaggggttctacagagcactctgcttgccgtagatgcttggagtgcgataagatctgctgggtcataagctccaagtggtggcacagcttgtgctgcagtctgaatgaacttgctgcagaaccttctcatggtctggttcccactcaaagctgacagcccctccctggggcagcggg-ccctgcattactgtggagctggtttcccacactctgcttggcatctgtcttaccaaggaatctgatgtgcttgctacatcctgctcccgggatccaatcctcatg----tgattaatgtagga--gtccagtatgtcattttgtgaaacgtacagacaa--gcaagttcactgcagactattactgacaCATCAGGGGACTT-GCTCAGA i calJac3.chr7 I 3204 C 0 s mm10.chr4 25402893 826 - 156508116 CCTAGCGTTCCGTTGGCTGCACTCACTAGAGAAGCAGTGGTTGACCAGAAG-----------------------TTTCCCTCCACCA--------------CACCCT-----------------------CTGTTATCTTCAGATCATCTGTTAGGCCAATGC-CGGGATCCtctgtagaccaggctctatgtctctcttccttg--------------------------ggg------------------------tccctggacatcaggacagcccagaagcatgcacaacatctgg-----gcagcagatgttgattttgga--actctgagctacctgcccatggaacttgcttctatcttccaggcctgcccagacttgtctctttacttcctctatttgataG---------------------GGCTAGCCTAGGCTAAGTCTGTTCTGGGCAACATAAaggctgcacagtcccttgatgtcctga--------ggtcagcctctcctgaggtttagtagc-agcttgcagccaatcttcaaaag--atgtagttcctgagggaagaggtcccaggcttgctccagagtccaacaggtgtcc---ctggaacttgcctaccggtgctgaccacagtctctgtgtagcacctactctgcAGTAGGTG----GAG-------------GGTCAGTCATCGG----AAGTGAATCAGTAGCTGGGAGGACAGTCTAGAT----CTGATGCTGAGC-----------------TCAGTGCAATACT-AGAATCCCACCCTAGTGAATATGAGCTTTGAGCTACTG-GAAGGTGTTTTCCCATCCTCTAGCTTCCA--TGTCTTCTGCATGCATCTAA-GCACCTGCTGAATGCTGGCTGTGTGCTCCGTCCTGCATGCTGCTGCTCAGGTCAGTATGGACTAGAATG-GCCTCTGTGGGAAGTCCTGACGGCTGGAGACTCTCTGGAGATTGTCATTGATACACCAGTGGACTCAGGGCAGA i mm10.chr4 C 0 C 0 e nomLeu3.chr24 459598 73 - 28733288 I e canFam3.chr2 14985428 0 - 85426708 C a score=475621.000000 s hg38.chr1_KI270760v1_alt 31253 167 + 109528 CTCAGACTGTGCGGCTCGGCCCCAGGCCCAGCTCC--CGTCCTCCCAGGCCTGCACAGTGAC--TCAGGGTTACAGAAGATTCTCCAGGAGAGCAGACACCCCAGCGAAGTC-T-TAGAAAGGAGAAGTGCACACTT-ATCCCGGTTC-CTGTATTTCAGGACTTTTCGTTAatt s panTro4.chr1 30467132 167 + 228333871 CTCAGACTGTGCGGCTCGGCCCCAGGCCCAGCTCC--CGTCCTCCCAGGCCTGCACGGTGAC--TCAGGGTTACAGAAGATTCTCCCGGAGAGCAGACACCCCAGCGAAGTC-T-TAGAAAGGAGAAGTGCACACTT-ATCCCGGTTC-CTGTATTTCAGGACTTCTCGTTAatt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30054749 167 - 229942017 ctcagactgttcggttcggccccaggcccagctcc--tgtcctcccagggctgcacagtgac--tcagGGTTACAGAAGATTCTCCAGGAGAGCTGACACACCAGCAAAGTC-T-TAGAAAGGAGAAGTGAACACTT-ATCCTGGTTC-CTCTATTTCAGGACTTTTCattaatt i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459671 169 - 28733288 CTCAGACTACGCGGCTCAGCCCCAGACCCAGCTTC--CCTGCTCCCCAGCCTGCAAAGTGAC--TGAGGATGACAGAAGATTGCCCAGGACAGCTGTCGTCCCAGCAAAGCCTT-TAGAAAGGAGAAATGAACTCAC-ATCTCAGTTCTCTCTATTCTGGGACTTTTCAGTAATT i nomLeu3.chr24 I 73 C 0 s rheMac3.chr1 33351792 168 + 229590362 CTCAGACTGTGTGGCTCGGTCCCAGGCCCAGCTCC--CATCCTCCCAGGCCTGCACAGTGAC--TCAGGGTTACAGAAGATTCTCCAGGAGAGCTGACACCCCAGCAAAGTC-T-TAGAAAGGAGAAGCGAACACTTAATCCCGGTTC-CTCTATTTCAGGACTTCTCGTTAATT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29862891 167 - 227556264 CTCAGACTGTGTGGCTCGGTCCCAGGCCCAGCTCC--CATCCTCCCAGGCCTGCACAGTGAC--TCAGGGTTACAGAAGATTCTCCAGGAGAGCTGACACCCCAGCAAAGTC-T-TAGAAAGGAGAAGCGAACACTT-ATCCCGGTTC-CTCTATTTCAGGACTTCTCGTTAatt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32626358 167 + 220367699 CTCAGACTGTGTGGCTCGGCCCCAGGCCCAGCTCC--CATCCTCCCAGGCCTGCACAGTGAC--TCAGGGTTACAGAAGATTCTCCAGGAGAGCTGACACCCCAGCAAAGTC-T-TAGAAAGGAGAAGCGAACACTT-ATCCCGGTTC-CTCTATTTCAGGACTTCTCGTTAatt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28142775 167 - 130588469 CTCAGACTGTGTGGCTCAGTCCCAGGCCCAGCTCC--CATCCTCCCAGGACTGCACAGTGAC--TCAGGGTTACAGAAGATTCTCCAGGAGAGCTGACACCCCAGCAAAGTC-T-TGGAAAGGAGAAGCGAACATTT-ATCCCAGTTC-CTCTATTTCAGGACTTTTCGTGAatt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64602351 163 + 155834243 CTCAGACCGTGTGGCTCGGCCCCAG-CCCAGGTCC--CATCCTCCCAGGCCTGCACAGTGAC--TAAGTGTTCCAGAAGATTCTCCAGGAGAGCTGACGCCCCAGCAAAGCC-T-TAGAA---AGAAGTGAACACAC-ATGCCAGTTC-CCTTATTTCAGGACTTTTCATTAatt i calJac3.chr7 C 0 C 0 s mm10.chr4 25403719 142 - 156508116 --------------------CCCA----CAGCTTCTGCCTCCTCTCACACATGACTCGTGACAAAAAAAATCCCAGAAGATTCCTCAGGAAAGCAAATGCCCT------GCC-TGTGGTGAGAAAATATGAACCCAT-GTCACCTTTC-CTCTAATTCACGGCTTTCCATTAGGT i mm10.chr4 C 0 C 0 e canFam3.chr2 14985428 0 - 85426708 C a score=24094.000000 s hg38.chr1_KI270760v1_alt 31420 10 + 109528 catt----caccca s panTro4.chr1 30467299 10 + 228333871 catt----caccca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30054916 14 - 229942017 cattcacccaccca i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459840 14 - 28733288 CATTCACCCACCCA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33351960 10 + 229590362 CATT----CACCCA i rheMac3.chr1 C 0 I 480 s macFas5.chr1 29863058 10 - 227556264 catt----caccca i macFas5.chr1 C 0 I 4 s papAnu2.chr1 32626525 10 + 220367699 catt----caccca i papAnu2.chr1 C 0 I 4 s chlSab2.chr20 28142942 10 - 130588469 catt----caccca i chlSab2.chr20 C 0 I 4 s calJac3.chr7 64602514 6 + 155834243 tatt----ca---- i calJac3.chr7 C 0 C 0 s mm10.chr4 25403861 10 - 156508116 CACC----TGCATA i mm10.chr4 C 0 C 0 s canFam3.chr2 14985428 10 - 85426708 CATC----CACCCA i canFam3.chr2 C 0 C 0 a score=794327.000000 s hg38.chr1_KI270760v1_alt 31430 325 + 109528 ---tctat-----------------catc-----------acaggatgagtagctaccgtggcccaggcactggctgaggccctg--ggacaccacagtggacagaagaggccccatccc-tcccctcggggagcccacatggtaatggggagagatgacagacacataaaggactgaccagctgtggggca----------tgtgggtggcgatgagg-------------------------tcagggacaca----ggaca---------------ggtgaaggggcagcgcatga-tgggagggagtgggacagtgacacgtgagacgcagtcaggaggagcgcgcagatg--aggacgt--ctgagctgaga--cctgaagtagg-----ggagC--CAGGCTGTCCAGGGGCCGGGGT-Ggg-- s panTro4.chr1 30467309 325 + 228333871 ---tctat-----------------catc-----------acaggaggagtagctaccatgccccaggcactggctgaggccctg--ggacaccgcagtggacagaagagaccccatccc-tcccctcggggagcccacatggtaatggggagaaatgacagacacataaaggactgaccagctgtgtggca----------tgtgggtggtgatgagg-------------------------tcagggacaca----ggaca---------------ggtgaaggggcagtgcatga-tgggagggagcgggacagtgacatgtgagacgcagtcaggaggagcgcgcagatg--aggacgt--ctgagctgaga--cctgaagtagg-----ggagc--caggctgtccaggggccggggt-ggg-- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30054930 325 - 229942017 ---tctat-----------------catc-----------cctggatgagtagctaccatgccccaggcactggctgaggccctg--ggacaccacagtggacagaaaagaccccatccc-tcccctcgcggagcccacatggtaatggggagagatgacagacacataaaggactgaccagctgtggggca----------tgtgtgtggcgatgagg-------------------------tcagagacaca----ggaca---------------ggtgaaggggcagtgcatga-tgggagggagtgggacagtgacatgtgagatgcagtcaggaggagcacacagatg--aggacat--ctgaactgaga--cctgcagtagg-----ggagC--CAGGCTGTCCAGGGGCCGGGGT-GTg-- i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 459854 341 - 28733288 ---CCTGTCTatccatccacccacccatc-----------attggctgagtagctactgtggcccaggcactggctgaggccctg--gggcaccacggtggacagaagagaccccagccc-t-ccctcagggagcccacatggtaatggggagagatgacagatacataaaggactgaccagctgtgtggca----------tgtgggtggcgatgagg-------------------------tcagggacaca----ggaca---------------ggtgaaggggcagtgcatga-tgggagggagtgggacagtgacataagagatgcagtcaggaggagtgcacagatg--aggacgt--ctgagctgaga--cctgaagtagg-----ggagC--CAGGCTGTCCAGGGGCCGAGGT-GGG-- i nomLeu3.chr24 C 0 C 0 s macFas5.chr1 29863072 325 - 227556264 ---tctat-----------------catc-----------actggctgagtagctcctgtggcccaggcactggctgaggcccca--gggcaccacagtggacagaagagaccccattcc-tcccttcagggagcccacgtggtaatggggagagatgacagacacataaaggactgaccagctgcgtggca----------tgtgggtggcgatgagg-------------------------tcaaggacaca----ggaca---------------ggtgaaggagcagtgcatga-tgggagggagtgggacagcaacatgtgagacacagtcaggaggagcgcgcagatg--aggacgt--ctgagctgaga--cctgacgtcgg-----ggagC--CAGGCTGTCCAGGGGACGGGGT-GGG-- i macFas5.chr1 I 4 C 0 s papAnu2.chr1 32626539 326 + 220367699 ---tctat-----------------cATC-----------ACTGGCTGAGTAGCTCCTGTGGCCCAGGCACTGGCTAAGGCCCCA--GGACACCGCAGTGGACAGAAGAGATCCCATCCC-TCCCTTCAGGGAGCCCACGTGGTAATGGGGAGAGATGACAGACACATAAAGGACTGACCAGCTACGTGGCA----------TGTGGGTGGCGATGAGG-------------------------TCAGGGACACA----GGACA---------------GGTGAAGGGGCAGTGCATGA-TGGGAGGGAGTGGGACAGCAACATGTGAGACACAGTCAGGAGGAGCGCGCAGATG--AGGACGT--CTGAGCTG-GA--CCTGAAGTCGG-----GGAGCCACAGGCTGTCCAGGGGCCGGGGT-GGG-- i papAnu2.chr1 I 4 C 0 s chlSab2.chr20 28142956 324 - 130588469 ---tctat-----------------catc-----------actggctgagtagctactgtggcccaggcactggctgaggcccca--ggacaccgcagtggacagaagagaccccatccc-tcccttcggggagcccacgtggtaacggggagagatgacagacacataaaggactgaccagctgcgtggca----------tgtgggtggcgatgagg-------------------------tcagggacaca----ggaca---------------ggtgaaggagcagtgcatga-tgggagggagtgggacagcaacatgtgagacacagtcaggaggagcgcgcagatg--aggacat--ctgagctg-ga--cctgaagtcgg-----ggagC--CAGGCTGTCCAGGGGCCGGGGT-GGG-- i chlSab2.chr20 I 4 C 0 s calJac3.chr7 64602520 323 + 155834243 ---tctat-----------------catc-----------actggatgaggacctactgtggcccaggcactggctgaggccctg--ggatgctgtagtggacagaagcgaccccatccc-tcccctcggggagcccatgtggtaatgaggagagatgacaaacacataaaggactggccagctacatggca----------tgtgtgtggcgatga-g-------------------------ttggggacaca----ggaca-------------------aaggggcagtgcatga-tgggagggagTGGGACAGAGACATGTGAGACATAGTCAGAAGGAGCATGTAGATG--AAGATGT--CTGAGCTGAGACCCCTGGAGTCAG-----GGATC--CAGGCTGTCCAGGGGCCAGCATGGGG-- i calJac3.chr7 C 0 C 0 s mm10.chr4 25403871 289 - 156508116 ---TCCAT-----------------CAT----------------GGtgaatgtctcttatgggccacacgatggcctaagcctgg--ggacacagcagtggatagaggataagtcattccatcccttccacgagtc----tggtaatgaggaaagatgatagactcataaacaaacaaacaacgacaggcta----------gatg-------------------------------------------gacaca---------------------------------tcggtggatgagtgtgaaagactt---cagcaaagca-gaggcgccatcaggaggggcactcggaatacataatgc--ctgaactgaaa--cctgaagcaagcagcaagaac--cctgctgtccaggagccaggga-ggg-- i mm10.chr4 C 0 I 1257 s canFam3.chr2 14985438 378 - 85426708 TGTCCCAT-----------------CCTCCCTCCTCCCatatttgatgagcagctaccctgggcccggccctgttccaggcatgggagggggaggcagtggacagaagagacccaacacc-a-cctccttggggcccacccggtaatcagcag---tgacagacataccaaccactgatcagctccgtgacaggccagctagtgaggagcgtgaggaggactctgacGGGAGAAGAGAGGAGCCCCATGGACAGAACGGGGACAGGGAAGAGCATGGGGGGGGGGGGGTCACTGCATGA-CTGGAGGGGCCAAGACCCCA----GGGAGA---GGTCAGGAGGGGCCCA-----G--AGGGTGCCACTGAGCTGAGA--CGTGGA----------GGAGT--CAACTTGCCCGGGAGCCTGGGG-AGGGG i canFam3.chr2 C 0 C 0 e rheMac3.chr1 33351970 480 + 229590362 I a score=112096.000000 s hg38.chr1_KI270760v1_alt 31755 44 + 109528 tgtcattactcccagtgccatcttccagtctcccaagcatccca s panTro4.chr1 30467634 44 + 228333871 TGTCATTACTCCCAGTATCATCTTCCAGTCTCCCAAGCATCCCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055255 44 - 229942017 tgtcattactcccagtgccatcttccactctcccaagcatccca i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 460195 44 - 28733288 TGTCATTCCTCCCAGTGCCATGTTCCACTCTCCCAAGCATCCCA i nomLeu3.chr24 C 0 M 2542 s macFas5.chr1 29863397 44 - 227556264 TGCCGTTACTCCCAGTGCCATCTTCCACTCTCCCAAGCATCCCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32626865 44 + 220367699 TGCCATTACTCCCAGTGCCATCTTCCACTCTCCCAAGCATCCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143280 44 - 130588469 TGCCATTACTCCCAGTGCCATCTTCCACTCTCCCAAGCATCCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64602843 44 + 155834243 TGTCGTTACTCCCAGTGCCATCTTTTACTCTCCCAAGCATCCCA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14985816 41 - 85426708 GGTCATTAGAGACAGAGCC---CCTCGCTCTCCGAAGTGTCCCG i canFam3.chr2 C 0 C 0 e mm10.chr4 25404160 1257 - 156508116 I e rheMac3.chr1 33351970 480 + 229590362 I a score=165447.000000 s hg38.chr1_KI270760v1_alt 31799 106 + 109528 gtcggaggatgaattctgtggtcaccATGGATAACGgggtcaaatgagctcatgggcataacatcttaactcagggcctggcata----cagtaggtgct------cagtatgtga s panTro4.chr1 30467678 83 + 228333871 GTCAGAGGATGAATTCTGTGGTCACCGTGGATAACGGGGTCAAATGAGCTCATGAACACAAAATCTTAACTCAGGGCCTGG---------------------------------GA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055299 106 - 229942017 gtcggaggatgaattctatggtcaccGTGGATAATGgggtcagatgagctcatgggcataaaatcttaactcagggcctggcata----caataggtgct------cagtatgtga i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29863441 106 - 227556264 GTCAGAGGATGAATTCTGTGGCCACCGTGGATAATGgggtcaaatgaggtcatgggcacaaaatcttaacacagggcctggcata----tagtaggtgct------cagtatgtga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32626909 112 + 220367699 GTCGGAAGATGAGTTCTGTGGCCACCATGGATAATGGGGTCAAATGAGCTCATGGGCACAAAATCTTaacacagggcctggcata----tagtaggtgctatATGCCAGTATGTGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143324 106 - 130588469 GTCGGACGATGAATTCTGTGGCCACCGTGGATAATGgggtcaaatgagctcatgggcacaaaatcttagcacagggcctggcata----gagtaggtgct------cagtatgtga i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64602887 106 + 155834243 GTCAgaggataaattctactgtcaccgtggttaatggggccaaatgaggttatgtgcataaaatcttaactcaaggcctggcata----cagtaggtgct------cagtatgtga i calJac3.chr7 C 0 C 0 s canFam3.chr2 14985857 103 - 85426708 --TGTGACATAGGTCAGGAGGTCGCCTCTGCCAATAGGATTAAACGAGCTCCTGTGCACAA-ATCTGAACCCAGG---TGGCACACGGTCAGTCAGCGCT-------AGGACGCGA i canFam3.chr2 C 0 C 0 e mm10.chr4 25404160 1257 - 156508116 I e nomLeu3.chr24 460239 2542 - 28733288 M e rheMac3.chr1 33351970 480 + 229590362 I a score=47363.000000 s hg38.chr1_KI270760v1_alt 31905 25 + 109528 gagctg-----------ctattgtCATTACTATTTT s panTro4.chr1 30467761 25 + 228333871 GAGCTG-----------CTATTGTCATTACTATTTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055405 25 - 229942017 gagctg-----------ctattatCATTACTATTTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33352450 24 + 229590362 GAGCTG-----------CTATTATCATTATTA-TTT i rheMac3.chr1 I 480 C 0 s macFas5.chr1 29863547 24 - 227556264 gagctg-----------ctattatCATTATTA-TTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32627021 22 + 220367699 GAGCTG-----------CTATTAGCATTAt---ttt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143430 25 - 130588469 gcgctg-----------ctgttatCATTATTATTTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64602993 25 + 155834243 gagctg-----------ctattatCATTATTACTTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14985960 36 - 85426708 GAGCTGTGATGTCCTTACCGCTGTCACCACTGTGAT i canFam3.chr2 C 0 C 0 e mm10.chr4 25404160 1257 - 156508116 I e nomLeu3.chr24 460239 2542 - 28733288 M a score=95194.000000 s hg38.chr1_KI270760v1_alt 31930 43 + 109528 ATTATCCTTATTATT-----CCACATGATGATGATGATC--CTGAATGCA s panTro4.chr1 30467786 43 + 228333871 ATTATCCTTATTATT-----CCACATGATGATGATGATC--CTGAATGCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055430 43 - 229942017 ATTATCCTTATTATT-----CCACATGATGAGGATGACC--CTGAATGCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33352474 43 + 229590362 TTTATCCTTATTATT-----CCACATGATAATGATGATC--CTGAATGCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29863571 43 - 227556264 TTTATCCTTATTATT-----CCACATGATAATGATGATC--CTGAATGCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32627043 43 + 220367699 tttATGCTTATTATT-----CCAcatgatactgatgatc--ctgaatGCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143455 42 - 130588469 TTTATGCTTATTATT------CACATGATGATGATGATC--CTGAATGCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64603018 43 + 155834243 GTTATCCTTAGTATT-----CCACATGATGATGATGATC--CTGAATGCA i calJac3.chr7 C 0 C 0 s mm10.chr4 25405417 39 - 156508116 aCCATCCTCATCATT-----T----TGATGGCTGTCATT--CTGAATGTG i mm10.chr4 I 1257 C 0 s canFam3.chr2 14985996 43 - 85426708 ---GTCCTTCCTGCTGTCACCTACACTTTGCTTACTTCCATCTGAA---- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 460239 2542 - 28733288 M a score=1646354.000000 s hg38.chr1_KI270760v1_alt 31973 497 + 109528 CACGTG-TTCCCAC--TCACCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCGTGGAGTGTGCAGGGTGAGCACCACCTCCACT-AATGGAGCTGCCCCACCTGGGCTGTCGGGA-----GGGATGGAGCACCCTGAGCCCCCACT-GGGGGTG-GGGA-GGGGGAAGGTGCCAGGCGGGGTGGTGTGGGCCAATCCCTCTCC-----TCCCACAATCCTTGCT-GA--CT-CACAGGCAGCTCTGGCTGGACTCGGCTGCTCCTGCTGACAGATCATTGTGTCAGGAGTCTGGGGAAGGTC----TCATTAATTATGATAATTGATACCTTTG-AAGATGCCGGCTGTGTGATGCCTGCTCTGGTGACACAGGATTCTGGTAATTCTGTTTGAACTGCATTTTCCAAGCAATATGGTTTACA-------TTTTGG-CCACTAGGAAAATGG-TTTATCTTTGAGGATGCTGCCTGGGGTGGACTGGCAGGA---------------GCC--------------AG---------------CCTCCTGGAGGGTCTTGATGATGCCAGAGCTGGGGGA s panTro4.chr1 30467829 497 + 228333871 CACGTG-TTCCCAC--TCACCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCGTGGAGTGTGCAGGGTGAGCACCACCTCCACT-AATGGAGCTGCCCCACCTGGGCTGTCGGGA-----GGGACAGAGCACCCTGAACCCCCACT-GAGGGTG-GGGA-GGGGGAAGGTGCCAGGCGGGGTGGTGTGGGCCAATCCCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGGCAGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATTGTGTCAGGAGTCTGGGGAAGGTC----TCATTAATTATGATAATTGACACCTTTG-AAGATGCCGACTGTGTGATGCCTGCTCTGGTGACACAGGATTCTGGTAATTCTGTTTGAACTGCATTTTCCAAGCAATATGGTTTACA-------TTTTGG-CCACTAGGAAAATGG-TTTATCTTTGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------AG---------------CCTCCTGGAGGGTCTTGATGATGCCAGAGCTGGGGGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055473 497 - 229942017 CACGTG-TTCCCAC--TCACCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCATGGAGTGTGCAGGGTGAGCGCCACCTCCACT-AATTGAGCTGCCTCACCTGGGCTGTCAGGA-----GGGATGGAGCACCCTGAACCCCCACT-GGGGGTG-GGGA-GGGGGAAGGTGCCAGGCGGGGTGGTGTGGGCCAATCCCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGGCAGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATTGCGTCAGGAGCCTGGGGAAGGTC----TCATTAATTATGATAATTGACAACTTTG-AAGATGCCGGCTGTGTGATGCCTGCTCTGGTGACACAGGATTCTGGTAATTCTGTTTGAGCTGCATTTTCCAAGCAATATGGTTTACA-------TTTTGG-CCACTAGGAAAATGG-TTTATCTTTGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------AG---------------CCTCCTGGAGGGTCTTGATGGTGCCAGAGCTGGGGGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 462781 490 - 28733288 CACGTG-TTCCCAC--TCACCTCCTGCTTCCAAGTCTCAGAAAC-TTCACGGTGGAGTGTGCAGGGTGAGTGCCTCCTCCACT-AATGGAGCTGCCCCACCTGGGCTGTTGAGA-----GGGATGGAGCACCCTGAACCCCAACT-GGGGGCGAGGGA-GGGGGAAGCTGCCAGACGGGGGCGTGTGGGCCAATCCCTCCCC-----TCCTCCCATCCTTGCA-GA--CT-CAAAGGCG-----------------------CTGCTGACAGATCGTCGCGTCAGGAGTCTGAGGAAGGTC----TCATTAATTATGATTATTGACACCTTTG-CAGATGCCGGCCATGTGACGCCCACTCTGGTGACAAAGGATTCCGGTAATTCTGTTTGAACTGCACTTTCCAAGCAATATGGTTTTCA-------TTTGGG-CCACTGGGAAAACAG-TTTATCTTCAAAGACACTGTCTGGGGTGGGCTGGCGGGC---------------GCT--------------TGGCCCCACTGGCACTCCCTCCTGGAGGGCCTTGATGGTGCCAGAGCTAAGAGA i nomLeu3.chr24 M 2542 I 1076 s rheMac3.chr1 33352517 497 + 229590362 CACGTG-CTCCCAC--TCGCCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCATGGAGTGTGTGGGGTGAGCGCCACCTCCACT-AACGAAGCTGCCCCACCTGGGCTATCGGGA-----GGGACAGAGCACCCTGAGCCCCCACT-GGGGGTG-GGGAGGGGGGAAGGTGCCAGGCAGGG-AGTGTGGGCCAATCTCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGGCAGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATCGTGTCAGGAGTCTGGGGAAGGTC----TCATTAATTATGATAATTGACACCTTTG-AAGATGCCGGCTGTGTGATGCCCGCTCTGGTGACAAAGGATTCTGGTAACTCTGTTTGAACTGCACTTTCCAAGCAATATGGTTTTCA-------TTTTGG-CCACTAGGAAAATGG-TTTATCTTCGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------GG---------------CTCCCTGGAAGGTCTTGAGGGAGCCAGAGCTGGGGGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29863614 502 - 227556264 CACGTG-CTCCCAC--TCGCCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCATGGAGTGTGTGGGGTGAGCGCCACCTCCACT-AACGGAGCTGCCCCACCTGGGCTGTTAGGAGGGATGGGACGGAGCACCCTGAGCCCCCACT-GGGGGTG-GGGAGGGGGGAAGGTGCCAGGCAGGG-AGTGTGGGCCAATCTCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGGCAGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATCGTGTCAGGAGTCTGGGGAAGGTC----TCATTAATTATGATAATTGACACCTTTG-AAGATGCCGGCTGTGTGATGCCCGCTCTGGTGACAAAGGATTCTGGTAACTCTGTTTGAACTGCACTTTCCAAGCAATATGGTTTTCA-------TTTTGG-CCACTAGGAAAATGG-TTTATCTTCGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------GG---------------CTCCCTGGAAGGTCTTGAGGGAGCCAGAGCTGGGGGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32627086 502 + 220367699 CACGTG-CTCCCAC--TCGCCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCGAGGAGTGTGAGGGGTGAGCGCCACCTCCACT-AACGGAGCTGCCCCACCTGGGCTGTCAGGA-----GGAACGGAGCACCCTGAGCCCccact-gggggtg-gggaggggggaagttGCCAGGCAGGG-AGTGTGGGCCAATCTCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGGCTGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATCGTGTCAGGAGTCTGGGGAAAGTC----TCATTAATTATGATAATTGACACCTTTG-AAGATGCCGGCTGTGTGATGCCCGCTCTGATGACAAAGGATTCTGGTAA--CTGTTTGAACTGCACTTTCCAAGCAATATAGTTTTCATTTGGGCTTTGGG-CTACTAGGAAAATGG-CTTATCTTTGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------GG---------------CTCCCTGGAAGGTCTTGAGGGTGCCAGAGCTGGGGGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143497 497 - 130588469 CACACG-CTCCCAC--TCGCCTCCTGCTTCCAAGTCTCAGAAAC-TTCACCGTGGAGTGTGCGGGGTAAGCGCCACCTCCACT-AACGGAGCTGCCCCACCTGGGCTGTCGGGA-----GGGACGGAGCACCCTGAACCCCCACT-GGGGGTG-GGGAGGGGGGAAGGTGCCAGGCGGGG-AGTGTGGGCCAATCTCTCTCC-----TCCCCCAATCCTTGCT-GA--CT-CACAGACAGCTCTGGTTGGACTCAGCTGCTCCTGCTGACAGATCATCGCATCAGGAGTCTGGGGAAGGTC----TCATTAATTATGATAATTGACACCTTTG-AAGATGCCGGCTGTGTGATGCCCGCTCTGGTGACGAAGGATTCTGGTAACTCTGTTTGAGCTGCACTTTCCAAGCAATATAGTTTTCA-------TTTTGG-CTACTAGGAAAATGG-TTTATCTTCGAGGATGCTGCCTGGGGTGGACTGGCAGGC---------------GCC--------------AG---------------CTCCCTGGAAGGTCTTGAGGGTGCCAGAGCTAGGGGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64603061 501 + 155834243 CACGTG-TTCCCGC--TCACCTCCTGTTTCCAAGTCTCAGAAAC-TTCACCATGGAGTGTGTAGGGTGAGCACCACCTCCACT-AATGGAGCTGCCCCACCTGGGCTGTCAGAA-----GGGACAGAGCACCCTGAGCCTCTACT-GAGGGCA-GAGGAGGGGGAAGGGGCCAGGCAGGGGGGTGTAGGACAATCCCTCCCC-----CCCCCTAGTCCTTGCA-GACTCT-CACAGGCAGCTCTGGTCAGACTTGGCCACTCCTGCTGACAAATTATCGCATCAGGAGTCTGGGGAAGGTC----TCGTTAATTATGATAATTGACACCTTTG-AAGATGCCAGCTGTGTGACGCCTGCTCTGGTGACAAAGGATTCCGGTAATTCTTTTTGAACTGCATTTTTCAAGCAATATGATTTTCA-------TTTTGG-CCACTAGGAAAATGGTTTTATCTTCAAGGATGCTGCCTGGAGTGAACTGGCAGGC---------------GCC--------------AG---------------CCTCCTGGAGAGTCATGATGGTGCCAGAGCAGTGGGA i calJac3.chr7 C 0 C 0 s mm10.chr4 25405456 486 - 156508116 --AGTGCTTTCCAC--TCATCTGTTCCCTCT---TCTGGAACCC-TTCTCCAAAGAGTGT-TGTGTGGAACACTGCTTCC-CC-AATGAAGCCACCCTGTGTGGGGGTTCTGGG-----CGAGCTGGGGA-GCTGAGCTCTCTCT---GGGTG-GACA---------GTGCCCAGCATCA-------TGCCCATCCCTCTTCCAAATCCCCTGCATCTTTACCAGA--CTCCACAGGTGGCTCTGACTGGATTCTGCAGCTCCTGCTGTCAGACCAT-ATGTCCAGAGCCTGAGGAAGGTTGAAGGCAGTAACTACGACAACTGACACCTTCA-CAGATTTCCCGTGTTTGACGCCCACATTGCTAAAGAAATGCTCT-GCAGTTCTGTTTGAACAGCACTTTCCAAGC-ACATG----TCA-------CCTCAGCCCAATGGGAACACA--TTTACTTTCCA----GCTG-CTGGACTGAGATGGCAGAG---------------CTCTTGGTCACTTGTGTGG---------------CCTCCTGGAGACTTCAGGCAGTGCTAAAGCTGGGGAC i mm10.chr4 C 0 C 0 s canFam3.chr2 14986039 468 - 85426708 CACGGG-CTTCCCCGGTCACCTGCTGTATTGAGATCTCAGAAACGGGCAACGAGGGGTGTTTGGGGTGAGCGCTGCCTCCCCTGGACGGAGCTGCCCCTCC-AGGCTGTGAGAG-----GAGACTGAGCACCCCGAGCTCCCACCCGCGGGTG-CACA----------------------------GGGTCTGTCCGTCCGC-----GTCCCC-ACCCCCGCA-GA--CC----AGGCAG---------------GTGGCTCCTGCTGACAGACCAGCCTGTCGGGAATCTGGGGAAGGCC----TAATTAATTCTGATAATTGACACCTTCGCCAGATGTCTACCGTGTGACACCTGCTCTGACGGTAAAAGGCTCAGGTAATTCTGTTTGAACAGCACTTTCCAAGCAATATGCTGTGCG-------TTTGGC-CCACCAGGAAACTGGGTTCACTTTCAAAGACGCTGCCTCGGGTGGGCGGGCTGGCCGCTTGGCCTTCCTTGCT--------------CC---------------CCTCGTGCAGGGCCTCGAGGGTGCCAGAGCTAG---- i canFam3.chr2 C 0 C 0 a score=879529.000000 s hg38.chr1_KI270760v1_alt 32470 373 + 109528 GAGCCCTGTGGTTCCT-GGGCTGACCTCAGGGCAGG-GGGCATGGCTTCCACGGGATAGGGAGGGTGTTTGTCAACATCAGGAAG--------------AACACAGACTCTGGA-GGGGCCCCAG-GGCAGCACCAGCCTGCactgattcaagcctggcaccgccccctggaggggggctggtaccacccctgatttctcagaccagcggtctgaagtgcagagaggggcaatgatgtgccc-ggtcaca-----GCCCACCCCCTTCACCTGTCATCTGCCA---GGACCTTGGCTCACTCTGCGTCCTCCAATTCCAGCCTCCACCGACTGGTTGCCCTGCTCTG-CTCTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAAATTGTGGCCAGCTGCGGCCA s panTro4.chr1 30468326 372 + 228333871 GAGCCCTGTGGTTCCT-GGGCTGACCTCAGGGCAGG-GGGCATGGCTGCCAAGGGATAGGGAGGGTGTTTGTCAACATCAGGAAG--------------AACACAGACTCTGGA-GGGGCCCCAG-GGCAGCACCAGCCtgcattgattcaagcctggcaccgccccctggaggggggctggtaccacccctgatttctcagaccagcggtctgaagtgcagagaggggcaatgatgtgccc-ggtcaca-----GCCCACCCCCTTCACCTGTCATCTGCCA---GGACCTTGGCTCACTCTGCGTCCTCCAATTCCAGCCTCCACCGACTGGTTCCCCTGCTCTG-CTCTAC-TGCTGAGGGCCTGAGA----------GGGCC---CCCAAAGTGTGGCCAGCTGCGGCCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30055970 373 - 229942017 GAGCCCTGTGGTTCAT-GGGCTGACTTCAGGGCAGG-GGGCATGGCTGCCAAGGGATAGGGAGGGTGTTTGCCAACATCAAGAAG--------------AACACAGACTCAGGA-GGGGCCCCAG-GGCAGCACGAGCCTGCactgattcaagcctggcaccgccccctgaaggggggctggtaccacccctgatttcacagaccagcagtctgaagtgcagagaggagcaatgatgtgcct-ggtcaca-----cCCCACCCACTTCACCTGTCATCTGCCA---GAAACTTGGCCCACTCTGTGTCCTCCAATTCCAGCCCCCACCGACTGGTTCCCCTGCTCTG-CCTTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAAAGTGTGGTCAGCTGCGGCCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33353014 371 + 229590362 GAGCCCTGTGGTTCCT-GGGCAGACCTCAGGGCAGG-GGGCATGGCTGCCAAGGGATAGGGAGAGTGTTTGTCAACATCAGGAAG--------------AACACAGACTCCAGA-GGGGCCCCAG-GGCAGCACGAGCCTGCActgattcaagcctggcactgtcccctgaaggggggttggtacctcccctgatttctcagaccagcggtctgaagtgcagagaggaacaatgatgtgccc-agtcaca-----cCCCACCCCC-TCACCGGTCATCCGCCA---GGACCTTGGCCCACTCTGTGTCCTCCAATTCCAT-CCCTACCGACTGGTTCCCTTGTTCTG-CCCTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAACGTGTGGTCAGCTGTGGCCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29864116 371 - 227556264 GAGCCCTGTGGTTCCT-GGGCAGACCTCAGGGCAGG-GGGCATGGCTGCCAAGGGATAGGGAGAGTGTTTGTCAACATCAGGAAG--------------AACACAGACTCCGGA-GGGGCCCCAG-GGCAGCACGAGCCTGCACTGATTCAAGCCTGGCACTGTCCCCTGaaggggggttcgtacctcccctgatttctcagaccagcggtctgaagtgcagagaggaacaatgatgtgccc-agtcaca-----cCCCACCCCC-TCACCGGTCATCCGCCA---GGACCTTGGCCCACTCTGTGTCCTCCAATTCCAT-CCCTACCGACTGGTTCCCTTGTTCTG-CCCTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAACGTGTGGTCAGCTGTGGCCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32627588 371 + 220367699 GAGCCTTGTGGTTCCT-GGGCAGACCTCAGGGCAGG-GGGCACGGCTGCCAAGGGATAGGGAGAGTGTTTGTCAACATCAGGAAG--------------AACACGGACTCCGGA-GGGGCCCCAG-GGCAGCACGAGCCTGCACTGATTCAAGCCTGGCACTGTCCCCTGAAGGGGGGTTGGTACCTCCCCTGATTTCTCAGGCCAGCGGTCTGAAGTGCAGAGAGGAACAATGATGTGCCT-GGTCACA-----CCCCACCCCC-TCACCGGTCATCCGCCA---GGACCTTGGCCCACTCTGTGTCCTCCAATTCCAT-CCCTACCGACTGGTTCCCTTGTTCTG-CCCTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAACGTGTGGTCAGCTGTGGCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28143994 372 - 130588469 GAGCCCTGTGGTTCCT-GGGAAGACCTCAGGGCAGG-GGGCATGGCTGCCAAGGGATAGGGAGAGTGTTTGTCAACATCAGGAAG--------------AACACAGACTCCGGA-GGGGCCCCAG-GGCAGCACGAGCCTGCACTGATTCAAGCCTGGTGCTGTCCCCTGaagggggtttggtacctcccctgatttctcagaccagtgacctgaagtgcagagaggaacaatgatgtgcct-ggtcaca-----cCCCACCCCC-TCACCGGTCATCTGCCA---GGACCTTGGCCCACTCTGTGTCCTCCAATTCCATCCCCTACCGACTGGTTCCCTTGTTCTG-CCCTACCTGCTGAGGGCCTGAGA----------GGGCC---CCCAACGTGTGGTCAGCTGTGGCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64603562 361 + 155834243 GAGCC-TATGGCTCCT-------------GGTCAGG-GGGCATGGCTGCCAAGGAATAGGGAGGGTGTTTGTCAACATCAGGAAG--------------AACACAGGCTCCAGA-GAGACCCAAG-GGCAGCACCAGCCTGCACTGATTCAAGCCTGGCACCACCCCCTGAAGGAAGGCTGGTACCACCCCTGACTTCTCAGACCAGCGTTTGGAAGTGCAGATAGGAGTGATGATGTGTCC-AGTCACT-----CCCCACCCC--TCACCTATCATCTGCCAGGTGGACCTTCGCCCACTCTATGTCCTCCAATTCCAGCCCCTGCCAACTGGTTCCTCTGCTCTG-CCCTACCTGCTGAGGTCCTGAGA----------Gggct---cccaaagtgtggtcacctgtggcca i calJac3.chr7 C 0 C 0 s mm10.chr4 25405942 334 - 156508116 -AGTCACTTTGTGCCTCAGTCAGACCCCAGAGCAAACAGGCCTAGCTG-CAGCAGGTGGGGAGG-----TATCCACA---------------------------GGTATCTAGA-AGGGTCTAAGTGGC----TAGGTCTGGACTGACTTG---CTGCTCATCTCACTGTGTGGAGGGCTGGTG--TCTGCTGACATGTAGGA-----AGACTGAGGTGCAGGGAGG-GCAGTCATGTGCCT-CGCCCTT-----CCCCCACC---TCA-GGGTGACCAGCTA---CAGCCTTGGCCTGATACGTGTCCCTCCATTCCAG-CCCCATCAGTT-----CCCTGCTCTGTCCCCACCTGA-GAAAGCCCAAGG----------GGCCCCAGCCCAGTCAGCAGCCATGTGAAGCGG i mm10.chr4 C 0 C 0 s canFam3.chr2 14986507 327 - 85426708 --GCCGTGCTGTCCCT--GGCTGACCTC-GGGCAGA----------------------GGGAGGGTATTTATAGAGAGCAGGAGGTGCTGACATTCATAGACACCGGCTCTGGACTGGGTGCGAG-GGCAG--CTGGCCAGC----ATTTCATCCCCGCGTCG-CCCTTGAGGGAGGGC----ATTACCTCTGATTTCTCAAGTCAGGAAAACGAGGTTTGG--AGGGACAGTGATTTGCCTGGGTCTCTGCTGCCCCCACCACCTTCACCCATCACTGGCCT---TGGCCCTTGGCCCCTCAGAGACCTCCAATTCTAA----------------------------CCCTA---------GGCGTGAGACGACACCTTGGGGCC---CCCA---TGGGGCTGACCATGTCCT i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 463271 1076 - 28733288 I a score=1185738.000000 s hg38.chr1_KI270760v1_alt 32843 440 + 109528 GCCCCCGATGGAGga-gagcttgt----tctcaggcaggttcccaggaccc---c---ctcattcctgggaaccaaaacctct----ggagagg---gccagggaatctgtattttaccacctccctgggtgagtctgacctgctccaatgtctgggcaccactgTTGGTTCCCTCCTTTCCCATCTCCTACAGACCGCCCCGGCCCAGGCCCTCCCGCAGACCCTCTCTGTCTGTGCTGAGCCAGGGCTGACT-CTGCCT-CCAATGCTCC-TGCGATCCTcacagcaatgccacagcaatgccacaACTCTGAGCTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGGCTCCCAACGGGAAGGACACGTCCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTGTATCTCCCCTGGACTCCCCTCCAGGGCCCCCTGAGTTCACA-ATGGGCACAG s panTro4.chr1 30468698 430 + 228333871 GCCCCCGATGGAGga-gagcttgt----tctcaggaaggttcccaggaccc---c---ctcattcctgggaaacaaaacctct----ggagagg---gccagggaatctgtattttaccacctccctgggtgagtctgacctgctccaatgtctgggcaccactgTTGGTTCCCTCCTTTCCCATCTCCTACAGACCGCCCCGGCCCAGGCCCTCCCGCAGACCCTCTCTGTCTGTGCTGAGCCAGGGCTGACTTCCGCCT-CCAATGCTCC-TGCGATCCTcacagcaatgccacagcaatgccacaACTCTGAGCTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGGCTCCCAACGGGAAGGACACGTCCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTG-----------GACTCCCCTCCAGGGCCCCCTGAGTTCACA-ATGGGCACAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30056343 434 - 229942017 GCCCCCGATGGAGGA-GGGCTTGTTATCTATCAGgcaggttcctaggaccc---c---ctcattcctgggaaccagaacctct----ggagagg---gccagggaatctgtattttaccacctccctgggtgagtctgacctgctccaacatctgggcaccactgTTGGTTCCCTCCTTTCCCATCTCCTACAGACCGCCCCGGCCCAGGCCCTCCTGCAGACCCTCTCTGTCTGTGCTGAGCCAGGGCTGACTTCCGCCT-CCAATGATCC-TGTGATCCTCACAGCAATGCCACAG-----------CTCTGAGCTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGGCTCCCAACGGGAAGGACACATCCAAGCTCTGAGCTGGGCTTCTGCCCTGTCCCTCCTTGTACCTCCCCTGGACTCCACTCCAGGGCCCCCTGAGTTCACA-ATGGGCACAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 464347 363 - 28733288 GCCCCAGATGGAGGAGGGGCTTGT----TAGCAGGCCGACTCCCAGGACCT---C---TCCATTCCCCGGAACCAGAACCTCT----GGAGGGG-----------------------CCACTTCCCTGGGTGAGTCTGACCTGCTCCAATATCTGGGCACCACTGTTAGTTCCCTCCTCTCC------------------------------------CAAACCCTGCCTGTCTGTGCCAGGCCAGGGCTGACCTCCACCT-CCACTGCCCC-TGCAACGGTCACA------CTGCAG-----------CCCTGAGCCACTGCCACCACCGGTCTACGGGGAAGTCTGGCAAGGCTCCCAGCAGAATGGATGTGT-CAGGCTCTGCTCTGGGCTCCTGGCCTGTCACTGCCTGTCCCTCCC-------CCACCCCAGGG-ACCCTGAAGCCACA-ATGAGCACAG i nomLeu3.chr24 I 1076 C 0 s rheMac3.chr1 33353385 426 + 229590362 GCCCCTGATGGAGga-gggcttgt----tatcaggcaggttcccaggaccc---c---ctcgttcctgggaaccagaacctct----ggagagg---gccagggaatctgtattttaccacctccttgggtgagtctgacctgctccaacatctgggcaccactgTTAGTTCCCTCCTTTCCCATCTCCTACAGACTGCCCCAGCCCAGGCCCTCCCGCAGACCCTCCCTGTCTGTGCTGAGCCAGGGCTGACTTCCA-----CACTGCTCC-TGCTATCCTCACAGCAATGCCACAG-----------CTCTGAGTTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGACTCCCAATGGGAAGGACACGTTCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTGTACCTCCCCTGGACTCCACTCCAGGGCCCCCTGAGTTCACA-ATGGGCGCAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29864487 426 - 227556264 GCCCCTGATGGAgga-gggcttgt----tatcaggcaggttcccaggaccc---c---ctcattcctgggaaccagaacctct----ggagagg---gccagggaatctgtattttaccacctccttgggtgagtctgacctgctccaacatctgggcaccacTGTTAGTTCCCTCCTTTCCCATCTCCTACAGACTGCCCCAGCCCAGGCCCTCCTGCAGACCCTCCCTGTCTGTGCTGAGCGAGGGCTGACTTCCA-----CACTGCTCC-TGCTATCCTCACAGCAATGCCACAG-----------CTCTGAGTTGCTGCCACCA---GTCAATGGGGAAGTCCAGCAAGACTCCCAATGGGAAGGACACGTTCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTGTACCTCCCCTGGACTCCACTCCAGGGCCCCCTGAGTTCACA-ATGGGCGCAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32627959 426 + 220367699 GCCCCCGATGGAGGA-GGGCTTGT----TATCAGGCAGGTTCCCAGGACCC---C---CTCATTCCTAGgaaccagaatctct----ggagaGG---GCCAGGGAATCCGTATTTTACCACCTCCTTGGGTGAATCTGACCTGCTCCAACGTCTGGGCACCACTGTTAGTTCCCTCCTTTCCCATCTCCTACAGACTGCCCCAGCCCAGGCCCTCCCGCAGACCCTCCCTGTCTGTGCTGAGCCAGGGCTGACTTCCA-----CACTGCTCC-TGCTATCCTCACAGCAATGCCACAG-----------CTCTGAGTTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGACTCCCAATGGGAAGGACACGTTCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTGTACCTCCCCTGGACTCCACTCCAGGGCCCCCTGAGTTCACA-ATGGGAGCAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28144366 428 - 130588469 GCCCCCGATGGAGga-gggcttgt----tatcaggcaggttcccagaaccc---c---ctcattcctaggaaccagaacctct----ggagagg---gccagggaatctgtattttaccacctccttgggtgagtctgacctgctccaatgtctgggcaccactgTTAGTTCCCTCCTTTCCCACCTCCTACAGACTGCCCCAGCCCAGGCCCTCCCGCAGATCCTCCCTGTC--TGCTGAGCCAGGGCTGACTTCCACCT-CCACTGCTCC-TGCTATCCTCACAGCAATGCCACAG-----------CTCTGAGTTGCTGCCACCA---GTCAATGGGGAAGTCCAGCGAGACTCCCAAAGGGAAGGACACGTTCAAGCTCTGAGCTGGGCTCCTGCCCTGTCCCTCCTTGTACCTCCCCTGGACTCCACTCCAGGGCCCCCTGAGTTCACA-ACGGGCACAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64603923 427 + 155834243 gcccccagtggagga-gggcttgt----tatgaggcaggttcccaggacct---c---ctcattcccaggaaccagaacctct----ggggagg---gccagggaatctgtattttaccacctccctgggtgagtctgacctgctgcaatgtctgggcatcactgTTATTTCCTTCTTTTCCCATCTCCTACAGAC--CCCCCGCCCAGGCCCTCCCGAAGACTCTCCCTGTCTGTGCCAGGCCAGGGCTGACCTCCGCCT-CCACTGCTCC-TGCGATCCTCACAGCAATGCCAGAA-----------CTCTGAACCACTGCCACCA---GTCAATGGGGAAGTCCAGTGAGTCTCCCAATGGGAAGGACATGTCCA-GCACTGAGCTGGGGTCCTGCCCCATCCCTCCTTGTCCCTCCCCTGGACTCCAATCCAGGGACCCCTGAGTTCACA-ATGAGCATAG i calJac3.chr7 C 0 C 0 s mm10.chr4 25406276 255 - 156508116 ------GGTTGGGGG-GGACCTGT----TAGAATGCAGATTCCCAGGACTC---TGGAACCTTTCCTTG----------CATT----AGCGGGGCTCATCAGCAAGTCAGTGCATAACTACGTT---------------CCTGCTGGAAAGCCCTAGAACAATTATTATATCAGTTCCTCCTCAGCTCCTGT------------CTAAGATCTTCTCACA-------TCTGCCAGGTCTAGGCTGGAG-------CCATCT-ACACTGCCCC-TCTGA-------------AACAAAA-----------ATCTGAGTT-------------------------------------------TGGGAAGAA-------------------------------------------------------------ACCCAGAGTCCTCCTAGT-----------CACAG i mm10.chr4 C 0 C 0 s canFam3.chr2 14986834 390 - 85426708 -----GAGTGGGGGAggagcttgt----taacacgctgacccccaggatccagac---cccaggccccagaactaggaccccccgggggtgggg---gccagggaatctgta----------tccctgggtgagtcgggtgctctccagcatctgggaaccactg--AGCTGCCTCCTTGCCCACCTC--------------------------CCCCCAGACCCTCTGCATCGGTGCCAGGCCCGGGCTGACCTCTGCCCGATGCTGCCCCAGGCCATCCCCCCAGCAGCACTG--G-----------CCCCAAACCACCACCACCC---CTCCATGAGT--GTCAGATGGGGCTCAGGGCAG-AAGGACCTGTCCAGGCTCTGCCCTTGGCTCCAGCCCCGTCACCCCGTTCCTCCCCCGGGAACCCCACCCCCAGG---CCTGAGGGCACAGATGGGTGCAG i canFam3.chr2 C 0 C 0 a score=16586.000000 s hg38.chr1_KI270760v1_alt 33283 6 + 109528 CCTCT-G s panTro4.chr1 30469128 6 + 228333871 CCTCT-G i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30056777 6 - 229942017 CCTCT-G i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 464710 7 - 28733288 ACTCTGG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33353811 6 + 229590362 TCTCT-G i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29864913 6 - 227556264 TCTCT-G i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32628385 6 + 220367699 TCTCT-G i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28144794 6 - 130588469 TCTCT-G i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64604350 6 + 155834243 CCTCT-G i calJac3.chr7 C 0 C 0 s canFam3.chr2 14987224 6 - 85426708 CCCCT-G i canFam3.chr2 C 0 C 0 e mm10.chr4 25406531 0 - 156508116 C a score=310973.000000 s hg38.chr1_KI270760v1_alt 33289 160 + 109528 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGTGCAGGAAGGACTGAGGTGCTGGCTTGCGAGCCCCCAACCTTGGATCTATGGTTTCCATGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCCG-CCCCCCACC--TCCCCCAGTGTT s panTro4.chr1 30469134 160 + 228333871 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGCGCAGGAAGGACTGAGGTGCTGGCTTGCGAGCCCCCAACCTTGGATCTATGGTTTCCATGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCCG-GCCACCACC--TCCCCCAGTGTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30056783 161 - 229942017 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGCACAGGAAGGACTGAGGTGCTGGCTTGTGAGCCCCCAACCTTGGATCTATGGTTTCCATGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCCACCCCCCCACT--TCCCCCAGTGTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 464717 147 - 28733288 AGGGGTCCTGGTTGCGGGGAGCCGGCTGAATTTCTCACACCAGCTGCCCAGG-AGGGCTGATGCACTGGCCTTAGAGCCCCCAGCCTCAGGCCTTGAGCTTCAAGGTTCTGCAGTGGCAGGAAGAGACCCGGA--AGCCCA---------------CCCACTGTT i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33353817 162 + 229590362 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGCCCACGAGGGACTGAGGTGCTGGCCTGCGAGCCCTCAGCCCTGGATCCATGGTTTCCAGGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCTT-CCCCCAACCAAACCCCCAGTGTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29864919 162 - 227556264 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGCCCAGGAGGGACTGAGGTGCTGGCCTGCGAGCCCTCAGCCCTGGATCCATGGTTTCCAGGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCTT-CCCCCAACCAAACCCCCAGTGTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32628391 162 + 220367699 AGGGACCCTGG--GTGGGGGGCCTGCTGAATCTCTCACACAGACTGCCCAGGAGGGACTGAGGTGCTGGCCTGCGAGCCTTCAGCCCTGGATCCATGGTTTCCAGGTTCTTCAGTGGCAGGAAGAAATCCAGaaccccctg-cccccaaccaaACCCCCAGTGTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28144800 162 - 130588469 AGGGACCCTGG--GTGGGAGGCCTGCTGAATCTCTCACACAGACTGCCCAGGAGGGGCTAAGGTGCTGGCCTGTGAGCCCTCAGCCCTGGATCTATGGTTTCCAGGTTCTTCAGTGGCAGGAAGAAATCCAGAACACCCTG-CCCCCAACCAAACCCCCAGTGTT i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14987230 73 - 85426708 GGAGGCCTTGG--GTGGGGAGGCTTC------------------------------------------------GAGCCCCAAGACC-AGACCTTCA--------GTCCTGCAGCAGCAGGAAGA------GAGGGCC--------------------------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25406531 0 - 156508116 C e calJac3.chr7 64604356 0 + 155834243 C a score=716459.000000 s hg38.chr1_KI270760v1_alt 33449 285 + 109528 TATAACTCTGCTGGCTCCAGCATGGATTCACCGCCCCATCCACAGCCCCTCACTCCACTCACACTAGGCCTCGATCCAGCCACAGGACCCGCGTCCCTTACTAGA---TGA-----GGCCGGTCGGGGCCAGACAGATGGCTCTATTT---TGCT----TTACATTTGCCCGGATCTCACTGCAGGGCTCCAG---------A-----------T----GATTCCGTGAGAGACAGAAAATTAACTGCCAATTTCTGCCTCATAACTTTCCATTCCCAGGAGACTGGGCTCTGATGGAAAGCTCTGGAATCCCTGGGTTCAAGA s panTro4.chr1 30469294 285 + 228333871 TATAACTCTGCTGGCTCCAGCATGGATTCACCGCCCCATCCACAGCCCCTCACTCCACTCACACTAGGCCTCGATCCAGCCACAGGACCCGCGTCCCTTACTAGA---TGA-----GGCCAGTCGGGGCCAGACAGATGGCTCTATTT---TGCT----TTACATTTGCCCGGATCTCGCTGCAGGGCTCCAG---------A-----------T----GATTCTGTGAGAGACAGAAAATTAACTGCCAATTTCTGCCTCATAACTTTCCATTCCCAGGAGACTGGGCTCTGATGGAAAGCTCTGGAATCCCTGGGTTCAAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30056944 288 - 229942017 TATAACTCTGCTGGCTCCAGCAGGGATTCACCGCCCTATCCACAGCCCCTCATTCCACTCACACTAGGCCTCGATCCAGCCACAGGACCCACTTCCCTTACTGGA---TGA-----GGCCAGTGGGGGCCAGACAGGTGACTCTATTTTCCTGCT----TTACATTTGCCCAGATCTCACTGCAGGGCTCCGG---------G-----------C----GATTCCATGAGAGACAGAAAATTAACTGCCAATTTCTGCCTCATAACTTTCCATTCCCAGGAGACTGGGCTCTGATGGAAAGCTCTGGAATCCCTGAGTTCAAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 464864 298 - 28733288 TGTAACTCT-CTGACCCCAACAGGGATTCACCGCCCCATCCACAGCCCCTCACTCCATTCTCACCAGGCTCTGATCCAGCCACAGGACCAGCTGAC----CTGGG---GGAGCCCCGGTCACTCGGGCCCAGGCAGGTGACTCCATTT---TTCTCTCATTGAAGTTGCCGGGACCTCACCTTTGGGCCCCAGGTCCTGTTTG-----------T----GATTCAGTGGGAGACAGAAAATTAACTATCAATATTAACCTCATAACCTTCCACTCCTAGGAGACTGGAGTCTGATGGAAAGTTCTGGGACCCCTGAGTTCAGGA i nomLeu3.chr24 C 0 M 111 s rheMac3.chr1 33353979 288 + 229590362 TATAACTCTGCTGTCTCCAGCAGGGATTCACCACCCTGTCCACAGCCCCTCACTCCACTCACACTAGGCCTCGATCCAGCCACGGGACCCGTGTCCTTTACCGGA---TGA-----GGCCAGTTGGGTCCAGACAGGTGACTCTATTTTCTTCCT----TTACATTTGCCTTGATCTCACTGCAGGGCTCCAG---------G-----------T----GATTCCGTGAGAGACAGAAAATTAACTGCCAATGTCTGCCTCGTAACTTTCCATTCCCAGGAGACTGGGCTCTGATGGAAAGTTCTGGAACGCCTGAGTTCAAAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29865081 288 - 227556264 TATAACTCTGCTGGCTCCAGCAGGGATTCACCACCCTGTCCACAGCCCCTCACTCCACTCACACTAGGCCTCGATCCAGCCACGGGACCCGTGTCCTTTACCGGA---TGA-----GGCCAGTTGGGTCCAGACAGGTGACTCTATTTTCTTCCT----TTACATTTGCCTTGATCTCACTGCAGGGCTCCAG---------G-----------T----GATTCCGTGAGAGACAGAAAATTAACTGCCAATGTCTGCCTCGTAACTTTCCATTCCCAGGAGACTGGGCTCTGATGGAAAGTTCTGGAACGCCTGAGTTCAAAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32628553 288 + 220367699 TATAACTCTGCTGGCTCCAGCAGGGATTCACCACCCCGTCCACAGCCCCTCACTCCACTCACACTAGGCCTCGATCCAGCCACGGGACCCGTGTCCTTTACCGGA---TGA-----GGCCAGTTGGGTCCAGACAGGTGactctattttcttcct----ttacatTTGCCTGGATCTCATTGCAGGGCTCCAG---------G-----------T----GATTCCgtgagagacagaaaattaactgCCAATGTCTGCCTCGTAACTTTCCATTCCCAGGAGACTGGGCTCCGATGGAAAGTTCTGGAACGCCTGAGTTCAAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28144962 288 - 130588469 TATAACTCTGCTGGCTCCGGCAGGGATTCACCACCCCATCCACAGCCCCTCACTCCACTCACACTAGGCCTCGACCCAGCCACGGGACCCGTGTCCTTTACCGGA---TGA-----GGCCAGCTGGGGCCAGACAGGTGACTCTGTTTTCTTCCT----TTACATTTGCCTGGACCTCACTGCAGGGCTCCAG---------G-----------T----GATTCCATGAGAGACAGAAAATTAACTGCCAATGTCTGCCTCATAACTTTCCATTCCCAGGAGATTGGGCTCTGATGGAAAGTTCTGGAATGCCTGAGTTCAAGG i chlSab2.chr20 C 0 C 0 s mm10.chr4 25406531 283 - 156508116 TGTGACTCAGCTGACCTCGGCAGGGGTTCATCACCCCATCCACAG-------TTCCAGCCA-GCCAGGCCTTGAGCCAGCCACAGGGCCTCCATCCACAGCCAAACTTTGA-----GATTACCTG--------CCGGTCTGCCTACTTTTCTCCA----TTACAGTCCACGACGCCCCAATCCAGAACCCCAA---------GTCCTATGTGGCT----GGTTCATTGAGAAGTTTAAAA-TGGCTGTTAATTT--ACCTCTTAAATTCCCTTTACTAGTACACTGGGGTCAGATGGAAAATCCTAGGAGCTGAGAGCCTAGGG i mm10.chr4 C 0 C 0 s canFam3.chr2 14987303 268 - 85426708 TGTAAGTCAGCTGACCTCA-CAGTGAGTCACCCGCCAGTCTACGGCCCCT--CTCCGTCCACGCCAGGCC-CGATGCAGCCGCGGGATCACAGCCC--------A---GCG-----GACCTGTGGGAGCC---CCAGGGCCTCTTCCTCCTCCTG----TTGC----TCTCAGATCTCGCTTCAG-GCTCCAG---------G-----------TGTGCGGTTCAGTGAGAGAC--AAAGTTAACCGCC-CTATTTGCCTCCACATTATCCATTAC-AGGACACTGAGGTCTGATGGAAAGTTCTAGAACCCCGGAGCTTGAGA i canFam3.chr2 C 0 C 0 e calJac3.chr7 64604356 0 + 155834243 C a score=402188.000000 s hg38.chr1_KI270760v1_alt 33734 200 + 109528 AACCTGaataataatcatgtttattgaaagctga--ctgtgccaggcatac--act--tcacctgcatcacctcatttcaccctcgaagcagtcacacggggtatgttactctctccccatgttgtcagtgaggaaactgaggcagggagaggttTGGCTCTTGG--CCTGCAAGGCAGGTGGTGGGCTGTAGGCCCCCCCACCCTGC s panTro4.chr1 30469579 200 + 228333871 AACCTGaataataatcatgtttattgaaagctga--ctgtgccaggcatac--act--tcacctgcgtcagctcatttcaccctcgaagcagtcacacggggtatgttactctctccccatgttgtcagtgaggaaactgaggcagagagaggttTGGCTCTTGG--CCTGCAAGGCAGGTGGTGGGCTCTAGGCTCCCCCACCCTGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30057232 200 - 229942017 AACCTGaataacaatcatgcttattgaaagctga--ctgtgccaggcatac--act--tcacctgcgtcacctcatttcacccttgaagcagtcacacggggtatgttactctctccccatgttgtcagtgaggaaactgaggcagggagaggttTGGCTCTTGG--CCTGCAAGGCAGGTGGTGGGCTCTGAGCCTCCCCACCCTGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33354267 200 + 229590362 CACCTGaataacaatcatgtttattgaaagttga--ctgtgccaggcatac--act--tcacctgtgtcacctcgttcaaccctggaagcagtcacacggagtatgtcactctctctccgtgttgccgacgaggaaattgaggcagggagaggttTGGCTCTTGG--CCTGCAAGGCAGGTGGTGGGCTCTGAGCCCCCCTATCCTGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29865369 200 - 227556264 CACCTGaataacaatcatgtttattgaaagttga--ctgtgccaggcatac--act--tcacctgtgtcacctcgttcaaccctggaagcagtcacacggagtatgtcactctctctccgtgttgccgacgaggaaattgaggcagggagaggttTGGCTCTTGG--CCTGCAAGGCAGATGGTGGGCTCTGAGCCCCCCCACCCTGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32628841 198 + 220367699 CACCTGAATAACAATCACGTTTATTGAAAGTTGA--CTGTGCCAGGCATAC--ACT--TCACCTGTGTCACCTCGTTCAACCCTGGAAGCAGTCACACGGAGTATGTCA--CTCTCTCCGTGTTGCCGTCGAGGAAATTGAGGCAGGGAGAGGTTTAGCTCTTGG--CCTGCAAGGCAGATGGTGGGCTCTGAGcccccccACCCTGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28145250 200 - 130588469 AACCTGaataacaatcatgtttattgaaagctga--ctgtgccaggcatat--act--tcacctgcgtcacctcattcaaccctggaagcagtcacacggagtatgtcactctctctccgtgttgctgatgaggaaattgaggcagggagaggttTGGCTCTTGG--CCTGAAAGGCAGACGGTGGGCTCTGAGCCCCCCGACCCTGC i chlSab2.chr20 C 0 C 0 s mm10.chr4 25406814 191 - 156508116 TCTCTGAGTAATG---Gcgtttattgaaagctgaccccgtgccaggcacac--acccatcatctccctcatcagacttaaccttcaaagcagctacat-gcgcatgttg--ttatcctcg-atcatcagtgaggaaactgaggc----agaagctcagcttt--g--cccgcaaggCAAAAGGTGGGCTCTGATCCTTCTATCCCAGG i mm10.chr4 C 0 I 3 s canFam3.chr2 14987571 176 - 85426708 --------------------GCCCtgaaagctggctctgtgccaggcacgcggaca--tc-cctgcctcaccctgctgaatggtcacaacggcc---cgggtattgtta---cccatccacgttgcggatgaggaagctgaggcaagg-ggggtCCGGATCCCGGCACCCCGACAGCAAGCCGC-GGCTCTGAGCCTCCTGCCTCCT- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 465162 111 - 28733288 M e calJac3.chr7 64604356 0 + 155834243 C a score=34424.000000 s hg38.chr1_KI270760v1_alt 33934 11 + 109528 GGCACTGCCCT s panTro4.chr1 30469779 11 + 228333871 GGCACTGCCCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30057432 11 - 229942017 GGCACTGCCCT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 465273 11 - 28733288 GGCACTGCCCT i nomLeu3.chr24 M 111 C 0 s rheMac3.chr1 33354467 11 + 229590362 AGCACTGCCCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29865569 11 - 227556264 AGCACTGCCCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32629039 11 + 220367699 AGCACTGCCCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28145450 11 - 130588469 AGCACTGCCCT i chlSab2.chr20 C 0 C 0 s mm10.chr4 25407008 10 - 156508116 GGTTCTGCCC- i mm10.chr4 I 3 C 0 s canFam3.chr2 14987747 11 - 85426708 GGTGCTGCCCC i canFam3.chr2 C 0 C 0 e calJac3.chr7 64604356 0 + 155834243 C a score=569579.000000 s hg38.chr1_KI270760v1_alt 33945 197 + 109528 GGGGCACCTCACACTCTGTCAAGGCCCTGCAGCCACCTCGGGGCTCTTTGGCGGTGATCACGGCCGGTACTGCACCAAGAGCAAACCT-AGAAG--AGAAATC---A-GTCCAGCAG-CCCATGCGGCCGTGTCTGCCACATGGGTCCTGGCTCTGGGAG-----GCTCA-GGGGGGTCATCCCAGGTGG-------------------AGCCA---CCAAATCAGCCCCACG s panTro4.chr1 30469790 197 + 228333871 GGGGCACCTCACACTCTGTCAAGGCCCTGCAGCCACCTCGGGGCTCCTTGGCGGTGATCATGGCCGGGATTGCACCAAGAGCAAACCT-GGAAG--AGACATC---A-GTCCAGCAG-CCCATGCGGCCGTGTCTGCCATGTGGGTCCTGGCTCTGGGAG-----GCTCA-GGGGGGTCATCCCAGGTGG-------------------AGCCA---CCAAATCAGCCCCACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30057443 197 - 229942017 GGGGCACCTCACGCTCTGCCAAGGCCCTGCAGCCACCTCGGGGCTCCTTGGCAGTGATCACGGCCAGGACTGCACCAAGAGCAAACCT-GGAAG--AAAAATC---A-GTCCAGCAA-CCCATGCGGCCGTGTCTGCCATGTGGGTCCTGGCTCTGTGAG-----GCTCA-GGGGGGTCATCCCAGGTGC-------------------AGCCA---CCAAATCAGCCCCATG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 465284 198 - 28733288 GGGGCATCTCACACTCTGTCAAGGCCCTGCAGCCCCCTCAGGGCTCCTTGGCGGTGATCACGGCCGGGGCTGCACCAAGAGCAAACCT-GGAAG--AGAAATC---A-GTCCAGCAG-CCCATGCGGCCGTGTCTGCCACGTGGGTCCTGGCTCTGTGAG-----GCTCAGGGGGGGTCATCCCAGGTGG-------------------AGCCA---CCAACTCAGCCCCACG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33354478 198 + 229590362 GGGGCACCTCACGCTCTGTCAAGGCCCTGCAGCCACCTCGGGGCTCCTTGGCAGTGATCACGGCTGGGAATGCACTGAGAGCAAACCT-GCAAG--AGAAATT---A-GTCCAGCAG-CCACATTAGTCATGTCTGCCACGTGAGTCCTGGCTCTGTGAG-----GCTCAGGGAGGGTCATCCGAGGTGG-------------------AGCCA---CCAAATCGGCCCTGCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29865580 198 - 227556264 GGGGCACCTCACGCTCTATCAAGGCCCTGCAGCCACCTCGGGGCTCCTTGGCAGTGATCACGGCTGGGAATGCACCAAGAGCAAACCT-GCAAG--AGAAATT---A-GTCCAGCAG-CCACATTAGTCATGTCTGCCACGTGAGTCCTGGCTCTGTGAG-----GCTCAGGGAGGGTCATCCGAGGTGG-------------------AGCCA---CCAAATCGGCCCTGCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32629050 198 + 220367699 GGGGCACCTCACGCTCTGTCAAGGCCCTGCAGCCACCTCGGGGCTCCTTGGCAGTGATCACGGCTGGGAATGCACCAAGAGCAAACCT-GCAAG--AGAAATT---A-GTCCAGCAG-CCACATTAGTCATGTCTGCCACGTGAGTCCTGGCTCTGTGAG-----GCTCAGGGAGGGTCATCCCAGGTGG-------------------AGCCA---CCAAATCGGCCCTGCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28145461 198 - 130588469 GGGGCACCTCACGCTCTGTCAAGGTCCTGCAGCCACCTCGGGGCTCCTTGGCAGTGATCACGGCTGGGAATGCACCAAAAGCAAACCT-GGAAG--AGAAATT---A-GTCCAGCAG-CCGATGCGGCCATGTCTGCCACGTGGGTTCTGGCTCTGTGAG-----GCTCAGGGAGGGTCGTCCCAGGTGC-------------------AGCCA---CCAAATCGGCCCTGCG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64604356 199 + 155834243 GGGGCACCTCACACTCTGCCGAGGCCCTGCAGCTACCTCGAGGCTCCTTAGCAGTGATCCCGGCCGGGACTGCAGGAAGAGCAAACCT-GGAAG--AGAAATCATTA-GTCCAGCAG-CCAACTCGGCCGTGTCTGCCATGTGGGTCCTGGCTCTGTGAG-----GCTCA-GGGGCGTCATCCCAGGTGG-------------------AGCCA---CCAA-TCAGCCCCGTG i calJac3.chr7 C 0 C 0 s mm10.chr4 25407018 158 - 156508116 ----------------------AGCTCCCTAGCCAC----AGGCTCC-TGGCAGCGACCTCTGC------TGTGCTAAAAATGAGCCCAGGAAG--TGAAATC---A-GGCCGG-GT-CCAGCGCGCACCTGCCTGCAGTGTGGGTGCC-GCTCTGT--------------AGATGCCCGGATCTGAAGG-------------------AGCCAGTCGCTAATCAGAGCCACT i mm10.chr4 C 0 C 0 s canFam3.chr2 14987758 213 - 85426708 --GGCGCCAC-CACTCTGT---GGGCCTGGAGCCGCCAC-CAGCTCCAGGGCGGTGACT----TGGGGGCTCCCCCGCGAGCAGGCCT-GGGAACTAGAGGCC---ACGTCCCATGGCCCCACGCAGACACGCCTGCACCCGGGGTCCCGGCGCCAGATGGACGAGCTCA-GGTGAG-CAGCCCACCTGGCGGTATCCAAAGCCTCAAAGGCCA---CCAACTCTTCCCCATG i canFam3.chr2 C 0 I 124 a score=1589941.000000 s hg38.chr1_KI270760v1_alt 34142 543 + 109528 CAtcctgttttgaaccctgtgacttacgctaaagagagagttgtacttgctctttgctctgtaaatcccagagtggcctttggccaaaagcaatacaattctgccctAGAAAAGTTAAAAGGACTTTGAAATTATGAGTCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGACGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGGAACACTTAACAGCAATTTCCCTTCCGGCTCACCTCCTCCAGGTTTTCATTAACCTCATAGTGCCCAGAGCCCTGGCCTGCAATGTGCAGAACAAGGAAGATGGGGGAGGCT---GGGCAGGGCC--CAGGGAAGGCGCCCAGTGTGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGATCC-CTTGCTGCCTCCAGCCCTGGGCACTGCAGTCCAGAGTACGGGAGTGGAGGGTGGCTGCCAACCCTGCCAAAGTCA--GGGATTCTGGGCGGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCACGCTGGAATGTGTCCAAAGATTTGA s panTro4.chr1 30469987 543 + 228333871 CAtcctgttttgaaccctgtgacttacactaaagacagagttgtacctgctctttgttctgtaaatcccagagtggcctttggccaaaagcaatataattctgccctAGAAAAGTTAAAAGGACTTTGAAATTATGAGTCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGACGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGGAACACTTAACAGCAATTTCCCTTCCCGCTCACCTCCTCCAGGTTTTCATTAACCTCATAGTGCCCAGAGCCCTGGCCTGCAATGTGCAGAACAAGGAAGATGGGGGAGGCT---GGGCAGGGCC--CAGGGAAGGCGCCCAGTGCGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGATCC-CTTGCTGCCTCCAGCCCTGGGCGCTGCAGTCCAGAGTACGGGAGTGGAGGGTGGCTGCCAACCCTGCCAAAGTCA--GGGATTCTGGGTGGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCACGCTGGAATGTGTCCAAAGACTTGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30057640 543 - 229942017 CAtcctgttttgaatcctgtgacttatgctaaagagatagttgtacctgctctttgtgctgtaaattccagagtggccttcggccaaaagcaatacaattctgccttAGAAAAGTTAAAAGGACTTTGAAATTATGAGTCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGACGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGAAACACTTAACAGCAATTTCCCTTTTGGCTCACCTCCTCCAGGTTTTCATTAACCTCATGGTGCCCAGAGCCCTGGCCTGCAATGTGCAGAACAAGGAAGATGGGGGAGGCT---GGGCAGGGCC--CAGGGAAGGTGCCCAGTGCGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGATCC-CTTGCTGCCTCCAGCCCTGGGCGCTGCAGCCCAGAGCACAGGAGCAGAGGGTGGCTTCCAACCCTGCCAAAGTCA--GGGATTCTGGGTAGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCATGCTGGAAAGTGTCCAAAGACTTGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 465482 524 - 28733288 tgtcctgtttcgagccctgtgtcttaaactaaagagagagttgtgcctgctctttgctctataaattacagagtggcctttggccaaaagcaatacaattctgccttAGAAAAGTTAAAAGGACTTTGAAATTATGAGCCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGATGAGATGACTGAGGCAGCAGAAAGGAAAATACAGAGAAACACTTAACAGCAATTTCCCTTCCCGCTCACCTCCTTCAGGTTTCCATTAACCTTGTGCCACCCAGAGCCCTGACCT--------CAGAGGCAG--AGAAGGGGGAGGCT---GGGCGGGGAC--CAGGG-AGGTGCCCAGCTCGGGGCACACACAGGGCCTACCTCACCTTTGCTGACTC-CCTGCTGCCTCCAGCCCTGGGTGCTGCAGCCTGGAGTGCAGGAGCTGA-AGTGGCTGCCGACCCTGCCAAAGTCA-------------TGGTGGTTCTCAATATTGTGGGGTT--------------------CACAGCACCCTGGAACTTTTGGCAACACACTGGAAGGTATTTAAAGATTCAA i nomLeu3.chr24 C 0 I 8719 s rheMac3.chr1 33354676 543 + 229590362 CgtcctgttttgaatgctgtgacttacgctaaagagacagttgtacctgctctttgctctttaaattccagagtggtctttggccaaaagcaatacaattctgacctAGAAAAGTTAAAAGGACTTTGAAATTATGAGTCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGATGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGAAACGCTTAACAGCAATTTCCCTTCCGGCTCACCTCCTCCGAGTTTTCAGTAACCTCGTGGTGCCCGGAGCCCTGACCTGCAATGTGGAGAACAAGGAAGATGGAGGAGGCT---GGGCGGGGCC--CAGGGAGGGCACCCAGTGCGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGGTCC-CTTGCAGCCTCCAGCCCTGGGCGCTGTAGCCCAGAGCATGGGAGCAGAGGGTGGTTGCCAAACCTGCCAAAGTCA--GGGACTCTGGGTGGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCATGCTGGAATGTGTCCAAAGACTTGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29865778 543 - 227556264 CgtcctgttttgaatgctgtgacttacgctaaagagacagttgtacctgctctttgctctttaaattccagagtggtctttggccaaaagcaatacaattctgccctAGAAAAGTTAAAAGGACTTTGAAATTATGAGTCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGATGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGAAACGCTTAACAGCAATTTCCCTTCCGGCTCACCTCCTCCGAGTTTTCAGTAACCTCGTGGTGCCCGGAGCCCTGACCTGCAATGTGGAGAACAAGGAAGATGGAGGAGGCT---GGGCGGGGCC--CAGGGAGGGCACCCAGTGCGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGGTCC-CTTGCAGCCTCCAGCCCTGGGCGCTGTAGCCCAGAGCATGGGAGCAGAGGGTGGTTGCCAAACCTGCCAAAGTCA--GGGACTCTGGGTGGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCATGCTGGAATGTGTCCAAAGACTTGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32629248 543 + 220367699 CGTCCTGTTTTGAATGCTGTGACTTACGCTAAAGAGACAGTTGTACCTGCTCTTTGCTCTTTAAATTCCAGAGTGGCCTTTGGCCAAAAGTAATACAATTCTGCCCTAGAAAAGTTAAAAGGACTTCGAAATTATGAGCCTCAAGCCCTGGCCTGATCCATGGAT-----GAGGACGAGAtgactgaggcagcagaaaggaaaagaaagagaaacgcTTAACAGCAATTTCCCTTCCGGCTCACCTCCTCCGAGTTTTCGGTAACCTCGTGGTGCCCGGAGCCCTGACCTGCAATGTGGAGAACAAGGAAGATGGAGGAGGCT---GGGCGGGGCC--CAGGGAGGGCACCCAGTGCGGGGCACACACAGGG-CTGCCTCGTCCTTGCTGGTCC-CTTGCAGCCTCCAGCCCTGGGCGCTGTAGCCCAGAGCATGGGAGCGGAGGGTGGTTGCCAAACCTGCCAAAGTCA--GGGACTCTGGGTGGTGCTTCTCAGCCTACCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCACACTGGAATGTGTCCAAAGACTTGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28145659 545 - 130588469 CgtcctgttttgaacgctgtgacttacgctaaagagacagttgtacctgctctttgctctttaaattccagagtggcctttggccaaaagcaatacaattctgccctAGAAAAGCTAAAAGGACTTTGAAATTATGAGCCTCAAGCCGTGGCCTGATCCATGGAT-----GAGGACGAGATGACTGAGGCAGCAGAAAGGAAAAGAAAGAGAAACGCTTAACAGCAATTTCCCTTCCAGCTCACCTCCTCCAGGTTTTCAGTAACCTCGTGGTGCCCGGAGCCCTGGCCTGCAATGTGGAGAACAAGAAAGATGGGGGAGGCT---GGGCGGGGCC--CAGGGAGGGCACCCAGTGCAGGGCACACACAGGG-CTGCCTCGTCCTTGCTGGTCC-CTTGCAGCCTCTAGCCCTGGGCACTGTAGCCCAGAGCATGGGAGCGGAGGGTGGCTGCCAAACCTGCCAAAGTCAGGGGGACTCTGGGTGGTGCTTCTCAGCCTGCCAGGGTT----------------------CAGCAGCATTGAAGACTCAA-AGCATACTGGAATGTGTCCAAAGACTTGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64604555 545 + 155834243 CAtcctgttttaagccctgtgacttacgccaaagacagagtcgtacctactttttgctctgtaaattccagagtggcctttggccaaaagcaatgcaattctgacctAGAAAAGTTAAAAGGTCTTTGAAATTATGAGCCTCGGGCTCTGGCCTGATCTGTGGATGAGGGGAGGATGAGATGACTGAGGCAGCAGCAAGGAAAAGAAAGAGAAA--CTTCACAGCAATTTCCCTTCCCGCTCACCACCTCCAGGTTTCCATGAACCTCACGATGCCCAGAGCCTTCATCTGCACTGTGGAGA---AAGAAGGTGGGGGAGGCT---GGGTGGGGTCGTCAAGGTGGGGGCCCAGATTGGGGCACACAAGGGG-CTGCCTCTCCCTTGCTGACCCACCTGCTGCCTCCAGCCCTGGGTGCAGCAGCCCGGAGCACC-GAATGGAGGATGGCTGCCAACCCTGCCAAAGTCA--GGGACTCTGGGCGATGCCTCTCAGCCTGCCAGGGTC----------------------CAGCAGCATTGCAGACTCAA-AGCACACTGGAATGTGTCCGTAGACTTGA i calJac3.chr7 C 0 C 0 s mm10.chr4 25407176 519 - 156508116 TGTCCTGCGG-GAACCCCGCAG--TGCACTCaggatcgcagagcgcctactctttgctctgtaaatcttcaaggagcctttggcc-aaagcaataacattccgacct-gaAAAGTTAAAAAGACTTTAAAATTATGAGCCCCAAG-TCTGACTCGGGCCCTGTGT-----GAGGACAAGA-GACCACGGTCACAGAGCAGAAAATACAGAGAGGGGAGTCA-AGCAATTTTCCTTCCA--TCACAGCCT-CGGGATTCCATTAACCTGCC--TGCCCAGAGC------CTGACACTCTGAGAAGGAG-CAGGTGGGAGGGGCTTCATGGAGGAGCA--GGTGGGAGGGGCTTAGC---GGATTC---CATGG-TCACCCTGCCCTTGCTGAGTC-CCAGCTTTGCCCAGC---GGTGTCTGTCTCCTATAGTGTAGGAGCCCAGGGGTGC-------CCTGCTAAGGTCA--AGGG-----------GAGTCTCAACAAGTTGGGGTCAGGGCCACTGTAGAATTTTTAGCAGCACTCTTGAAGA--CAG-CACACACACAGATGTATATAAAGGCTCAA i mm10.chr4 C 0 C 0 e canFam3.chr2 14987971 124 - 85426708 I a score=901971.000000 s hg38.chr1_KI270760v1_alt 34685 376 + 109528 AGGACACCAAATCTTCCCCACAACCACAAAGCCA-TGTGGTAACAATATCTTGTTGATGGTGGCATGCTTTGCCGCATCCTCGAAAGACACCAGTCC---TCATTAGCATGTCACCTTCTGCTATGTCTCTTAA---TCTGCGACACTTCCCCCTGCCCTGACTATGGCCCTTCCCCAT--GTGTGATGTAAGCAC---------ATAAGGCAGCCTCGGAGCTTACCTTGCTCCAGTGTCA---CTCCCGG--------GTGGCTGACTATAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCATGTTTGTGTAGCAGCCTCTGGCCTTGTTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAACGATGAGGGGTGTCATAGGGCCTGCCCACCACAT s panTro4.chr1 30470530 376 + 228333871 AGGACACCAAATCTTCCCCACAACCACAAAGCCA-TGTGGTAACAATATCTTGTTGATGGTGGTATGCTTTGCCACATCCTTGAAAGACACCAGTCC---TCATTAGCATGTCACCTTCTGCTATGTCTCTTAA---TCTGCGACACTTCCCCCTGCCCTGACTATGGCCCTTCCCCAT--GTGTGATGTAAGCAC---------ATAAGGCAGCCTCGGAGCTTACCTTGCTCCAGTGTCA---CTCCCAG--------GTGGCTGACTATAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCATGTTTGTGTGGCAGCCTCTGGCCTTGTTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAATGATGAGGGGTGTCATAGGGCCTGCCCACCACAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058183 376 - 229942017 AGGACACCAAATCTTCCCCACAACCACAAAGCCA-TGTGGTAACAATATCTTGTTGATGGTGGCATGCTTTGCCACATCCTCGAAAGACACCAGTCC---TCATTAGCATGTCACCTTCTGCTCTGTCTCTTAA---TCTCTGGCACTTCCCCCTGCCCTGACTATGGCCCTTCCCCAT--GCACGATGTAAGCAC---------ATAAGGCAGCCTCAGATTTTACCTTGCTCCAGTGTCA---CCCCCGG--------GTGGCTGATTATAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCAAGTTTGTGTGGCAGCCTCTGGCCTCGTTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAATGATGAGGGGTGTCATAGGGCCTGCCCACCACAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33355219 386 + 229590362 AGGACACCAAATCTTCCCCACAGCCACAAAGCCA-TGTGGTAACAATATCTCGTTGATGGTGGTATGCTTTGCCACATCCTCGAGAGACACCAGCCC---TCATTAGCATGTCGCCTTCTGCTCTGTCTCTTAA---TCTGCGGCACTTCTCCTTGCCCCAACTGTGGCCCTTCCCCAT--GCCTGAT-TAAGCAC---------ATAAGGCAGCCTCGGAGCTGACCTTGCTACAGGGTCACCACCCCCGGCCCCCGCCGTGGCTGACTACAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCAAGTTTGTGTGGCAGCCTCTGGCCTCACTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAATGATGAGGGACGTCATAGGGCCTGCCCACCACAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29866321 386 - 227556264 AGGACACCAAATCTTCCCCACAGCCACAAAGCCA-TGTGGTAACAATATCTCGTTGATGGTGGTATGCTTTGCCACATCCTCGAGAGACACCAGCCC---TCATTAGCATGTCGCCTTCTGCTCTGTCTCTTAA---TCTGCGGCACTTCTCCCTGCCCCAACTGTGGCCCTTCCCCAT--GCCTGAT-TAAGCAC---------ATAAGGCAGCCTCGGAGCTGACCTTGCTCCAGTGTCACCGCCCCCGGCCCCCGCCGTGGCTGACTACAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCAAGTTTGTGTGGCAGCCTCTGGCCTCACTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAATGATGAGGGACGTCATAGGGCCTGCCCACCACAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32629791 387 + 220367699 AGGACACCAAATCTTCCCCACAGCCACAAAGCCA-TGTGGTAACAATATCTCGTTGATGGTGGTATGCTTTGCCACATCCTCGAGAGACACCAGCCC---TCATTAGCATGTCACCTTCTGTTCTGTCTCTTAA---TCTGTGGCACTTCCCCCTGCCCCAACTGTGGCCCTTCCCCAT--GCCTGACGTAAGCAC---------ATAAGGCAGCCTCGGAGCTGACCTTGCTCCAGTGTCACCGcccccaccccccGCTGTGACTGACTACAAAGGAAGGACATTCAAAGATGGGGGCCAGTAGGG-----CCAAGTTTGTGTGGCAGCCTCTGGCCTCACTTACCCCCAACTGGTTGGCTGGAGGAGGCAGAAATGATGAGGGACGTCATAGGATCTGCCCACCACGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146204 387 - 130588469 AGGACACCAAATCTTCCCCACAGCCACAAAGCCA-TGTGGTAACAATATCTCGTTGATGGTGGCATGCTTTGCCACATCCTCAAGAGACACCAGCCC---TCATTAGCATGTCACCTTCTGCTGTGTCTCTTAA---TCTGCGGCACTTCCCCCTGCCCCAACCGTGGCCCTTCCCCAT--GCATGATGTAAGCAC---------GTAAGGCAGCCTCGGAGCTGACCTTGCTCCAGTGTCACCGCCCCCGCCCCCCACCGCGGCTGACTATAAAGGAAGGACGTTCAAAGGTGGGGGCCAGTAGGG-----CCAAGTTTGTGTGGCAGCCTCTGGCCTCATTTACCCCCAACTGGTTGACTGGAGGAGGCAGAAATGATGAGGGATGTCACAGGGCCTGCCCACCACGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64605100 382 + 155834243 AGGACACCAAACCGTCGCCACAACCACAAAGCCA-TGCGGTGGCAGTATCTCGTTGATGGCGGCACACTTTGCCACATCCTCGAAAGACGCCGGCCC---TCAAGAGCATGTCACCTTCTGCTGTGTCTCTTAA---TCTGCAGCGCTTCCCCCTG-CCTGACTGTGCCCCTTCCCCATGCGCCTGATATAAGCAC---------AGGAGGCAGCCTGGGAGCTTGCCCTGCTCCTGTAGCA---CCCTCTG--------GTGGCTGATTATAAAGGAAGGACCTTCAAAGATGGGAGCCAGTAGGGCCAAACCAAGTTTGTGTGGCAGCCTCCGACCTCGTTTACCCCCAACTGGTTGGCTGGAGGAGGCAGGAATGATGAGGGGTGTCGTGGGGTCTGCACACCACAT i calJac3.chr7 C 0 C 0 s mm10.chr4 25407695 363 - 156508116 AGAATACCAAGACTTCCCCGTGACAACAAGGCCACCATCAGGACAATATGCTGTTGACAGAACCATAATTTTTTCCATTCTCCAGAGCTGCCCATCCCTGTCATTTGCATACCACCTCCTGC----TCTCTCAGATTTCTGTG---------CCTGCCCTGGCTGTGCCCCTCTCCTAC--TCAAACTGAAAGCCCGTCGTCACTATCACTCAGCCTTCACAAATACCTCGCACCCATGTCC---CCCTTAGCTGTCACTAAAGATGGATATTGAAGGAGGACAAGCAAAAA--------------G-----CCAAGTCTGCATGGCAGCCCGGGATACAAGCTCATCCCAGCTGTTTGCTTAGATG-----GGAAGGATG-GGAAGGCAGTAGG----GCCCACCACAG i mm10.chr4 C 0 C 0 e nomLeu3.chr24 466006 8719 - 28733288 I e canFam3.chr2 14987971 124 - 85426708 I a score=56964.000000 s hg38.chr1_KI270760v1_alt 35061 20 + 109528 GGCAGTGAC-AGGAGTGGGAC s panTro4.chr1 30470906 20 + 228333871 GGCAGTGAC-AGGAGTGGGAC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058559 20 - 229942017 GGCAGTGAC-AGGAGTGGGAC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33355605 20 + 229590362 GGCAGTGAC-AGGAGTGGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29866707 20 - 227556264 GGCAGTGAC-AGGAGTGGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32630178 20 + 220367699 GGCAGTGAC-AAGAGTGGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146591 20 - 130588469 GGCAGTGAC-AGGAGTGGGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64605482 20 + 155834243 GGCAGTGAC-AAGACTGGGAG i calJac3.chr7 C 0 C 0 s mm10.chr4 25408058 21 - 156508116 GGAACAGAAGAGAACTGGGAC i mm10.chr4 C 0 I 8631 s canFam3.chr2 14988095 20 - 85426708 GGCAGCGAC-AGGAAGTGGAA i canFam3.chr2 I 124 C 0 e nomLeu3.chr24 466006 8719 - 28733288 I a score=669000.000000 s hg38.chr1_KI270760v1_alt 35081 283 + 109528 AAGAAAGGCTTTGGGGAAGGGGCGTGTGCCCAGCCCCTACTGCCTGTGGCCCACTCAGTGACTTAGGCCCTG----ATGACCTGAG-AGCAG--CATCTCCTCCATCATGGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTGGAGGAGGTTGCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACCAAAGGACACACTGAGGGGCCTTATGTAGGCGCTGGTG-GCTTTCCACTTGAGGGGGCCTTCCCTCAGCCTGCCAGCCAGCTC s panTro4.chr1 30470926 283 + 228333871 AAGAAAGGCTTTGGGGAAGGGGCGTGTGCCCAGCCCCTAGTGCCTGTGGCCCACTCAGTGACTTAGGCCCTG----ATGACCTGAG-AGCAG--CATCTCCTCCATCATGGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTGGTGGAAGTTGCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACCGAAGGACACACTGAGGGGCCTTATGTAGGTGCTGGTG-GCTTTCCACTTGAGGGGGCCTTCCCTCAGCCTGCCAGCCAGCTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058579 283 - 229942017 AAGAAAGGCTTTGGGGAAGGGGCGTGTGCCCAGCCCCTAGTGCCTGTGGCCCACTCAGTGACTTAGGCCCTG----ATGACCTGAA-AGCAG--CATCTGCTCCATCATGGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGCAGGTCTGG--------------------------------ACATTTTTGGTGGAGGTTGCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACTGAAGGACGCACTGAGGGGCCTTATGTAGGCGCTGGTG-GCTTTCCACTTGAGGGGGCCTTCCCTCAGCCTGCCAGCCAGCTC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33355625 276 + 229590362 AAGAAAGGCTTTGGAGAAGGGGCGTATGCCCAGCCTTTAGTGCTTGTGGCCCACTCAGTGACTTAG-----------TGACCTGAT-AGCAG--CATCTTCTCCATCATCGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTAGTGGAGGTTTCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACCAAAGGACACACCGAGGGGCCTTATGTAGGCGCTGGTA-GCTTTCCACTTGAGGGGGTCTTCCCTCAGCCTGCCAGCCAGCTC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29866727 276 - 227556264 AAGAAAGGCTTTGGAGAAGGGGCGTATGCCCAGCCCTTAGTGCTTGTGGCCCACTCAGTGACTTAG-----------TGACCTGAT-AGCAG--CATCTTCTCCATCATGGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTAGTGGAGGTTTCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACCAAAGGACACACCGAGGGGCCTTATGTAGGCGCTGGTA-GCTTTCCACTTGAGGGGGTCTTCCCTCAGCCTGCCAGCCAGCTC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32630198 282 + 220367699 AAGAAAGGCTTTGGGGAA-GGGCGTGTGCCCAGCCCTTAGTGCCTGTGACCCACTCAGTGACTTAGGCCCTG----ATGACCTGAT-AGCAG--CATCTCCTCCATCATgggggggAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTGCTGGAGGTTTCTTTGTGcctctcccat-ctccctggaCTCTCTCCACCAAAGGACACACCGAGGGGCCTTATGTAGGCCCTGGTA-GCTTTCCACTTGAGGGGGTCTTCCCTCAGCCTGCCAGCCAGCTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146611 276 - 130588469 AAGAAAGGCTTTGGGGAAGGGGCGTATGCCCAGCCCTTAGTGCTTGTGGCCTACTCAATGACTTAG-----------TGACCTGAT-AGCAG--CATCTCTTCCATCATGGGGTGGAGGTTGGCAGGGCAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTAGTGGAGGTTTCTTTGTGCCTCTCCCAT-CTCCCTGGACTCTCTCCACCAAAGGACACACTGAGGGGCCTTATGTAGGCACTGGTA-GCTTTCCACTTGAGGGGGTCTTCCCTCAGCCTGCCAGCCAGCTC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64605502 275 + 155834243 GAGAAAGGCTTTGGGGAAGGGGCGTGTGCCCAGCCCATAGTGCCAGTGGCCCGCTCAGTGACTCAGGCCCTG----ATTACCTGATCAGCAGGTCGTCTCCTCCATCATGGGGTGGAGGTTGGTAGGACAGTGGTAGGCAGAGGTGGGTCTGG--------------------------------ACATTTTTGGCGGAGGTTGCTTGGTGCCCCGCCCAT-CTCCCTGGGCTCTCACCACTGCAGGACACACTGAGGGGCCCTATGTAG----------GCTTTCCACTTGA--GGGTTTTCCCTCAGCCTGTCAGCCAGGTC i calJac3.chr7 C 0 I 137 s canFam3.chr2 14988115 307 - 85426708 --GAGAAGGCCTGAGGGAGGGGCGTG-ACCCTGGCCCCGGTGACTGT---CCACTCAGCGACTCAGACCCTGACCAAGAAGCTCATCAGCAG--TGTCTCCCCCACAGTGGGGTGCGGGTGGCTTGGAAGGTGGTGGG-AGAGG-GGATCTGGACTGGGATCTCACTCCCCCTCCTGGGTCAGCCACATTTTGGGCAAAGGTCGC-TGGCACCTCTCCCACACGCCCTCAGCAGTGACCATCACAGG-TGTGCTGA-TGCCCCGCTGTGAGCGCTGGTGCTCCCCCCACCCCAGGTG----CTCGTGACCCCGGGAGCAGTCTT i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 466006 8719 - 28733288 I a score=59465.000000 s hg38.chr1_KI270760v1_alt 35364 34 + 109528 T-------------------------------GTGACCACCACTCCCCTGCGAGTCTTTAGGGAT s panTro4.chr1 30471209 34 + 228333871 T-------------------------------GTGACCGCCACTCCCCTGTGAGTCTTTAGGGAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058862 34 - 229942017 T-------------------------------GGGACCGCCACTCCCCTGTGAGTCTTTAGGGAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33355901 50 + 229590362 TGAGGCTCTCCCTGGAG---------------GTGACCGCCACTCCCCTGTGAGTCTTTAGGGAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29867003 50 - 227556264 TGAGGCTCTCCCTGGAG---------------GTGACCGCCACTCCCCTGTGAGTCTTTAGGGAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32630480 50 + 220367699 TGAGGCTCTCCCTGGAG---------------GTGACCGCCACTCCCCTGTGAGTCTCTAGGGCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146887 50 - 130588469 TGAGGCTCTCCCTGGAG---------------GTGACCACCACTCCCCTGTGAGTCTTTAGGGCT i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14988422 62 - 85426708 ---TAGTCACGATGGAGGAGGAGTTGGAGGACATGTGCCCCACGGTCCTGGGGGACTTTCTGGAT i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 466006 8719 - 28733288 I e calJac3.chr7 64605777 137 + 155834243 I a score=37431.000000 s hg38.chr1_KI270760v1_alt 35398 13 + 109528 -------CTTTAAGCCAAAG s panTro4.chr1 30471243 13 + 228333871 -------CTTTAAGCCAAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058896 13 - 229942017 -------CTTTAAGCCAAAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 474725 13 - 28733288 -------CTTTAAGCCAAGG i nomLeu3.chr24 I 8719 C 0 s rheMac3.chr1 33355951 13 + 229590362 -------CTTCAAGCCAAAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29867053 13 - 227556264 -------CTTCAAGCCAAAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32630530 13 + 220367699 -------CTTCAAGCCAAAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146937 13 - 130588469 -------CTTCAAGCCAAAG i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14988484 20 - 85426708 CCCAGAACTTCAAGCCAAGG i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e calJac3.chr7 64605777 137 + 155834243 I a score=2438418.000000 s hg38.chr1_KI270760v1_alt 35411 896 + 109528 GTGTTTGGATAAGCCCTTCACATCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTC-TCAGTTTCTGTATTTGCCCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATGGAGTGAGTCGTAGCCAATTTCTGGTTTAAA---------TGATGAAACCTCTTCCCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaacaacccagggaagtaggcaaggctggGTC-CCCTGGG---------AGCAGAACAAAGAATTGGAGAAC-CAGCACCTGAAAGTAGAACCAGACTGCATGGCCATC----------------------CACCGTAGGGAAGAGCAAGCAGTGATCAGATGTACCCTGC----C-----------------CCTGATGTGGGACCCAGCATACTGTCAAACACTGGGGTTTCGGCT--TGCC--AGACTTCAGCTCAAatagcatctgtgtgacactcctgtcctactctgcactc--ctgtggcagacatcaccaatcattcacagcactccttcttcctgaccctgaattcagttccaaattccttgtcaagacaatttgtcaatcaagaagacacaaccaaccaaccaacattagcttgtgaaatggaacctgcttgccaGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAATGTTGCTGGtgaagtcaggcaggcctgggtttcagcttcagctctgtgaatggctaacaaggtggacttgggctagcatttgtgtcactctcagcctcagctttcccatctgtaaaatggagatgattggtatcaagtggggctggtaaggggattccaagaga s panTro4.chr1 30471256 891 + 228333871 GTGTTTGGATAAGCCATTCACATCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTC-TCAGTTTCTGTATTTGCCCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATGGAGT----CGTAGCCAATTTCTGGTTTAAA---------TGATGAAACCTCTTCCCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaacaacccagggaagtaggcaaggctggGTC-CCCTGGG---------AGCAGAACAAAGAATTGGAGAAC-CAGCACCTGAAAGTAGAACCAGACTGCATGGCCATC----------------------CACCATAGGGAAGAGCAAGCAGTGATCAGATGTACCCTGC----C-----------------CCTGATGTGGGACCCAGCATACTGTCAAACACTGGGGTTTCGGCT--TGCC--AGACTTCAGCTCAAatagcatctgtgtgacactcctgtcctactctgcactc--ctgtggcagacatcaccaatcattcacagcactccttcttcctgaccctgaattcagttccaaattccttgtcaagacaatttgtcaatcaagaacacacaaccaaccaaccaacattagcttgtgaaatggaacctgcttgccaGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAATGTTGCTGGtgaagtcaggcagtcctgggtttcagcttcagctctgtgaatggctaacaaggtggacttgggctagcattt-tgtcactctcagcctcagctttcccatctataaaatggagatgattggtatcaagtggggctggtacggggattccaagaga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30058909 913 - 229942017 GTGTTTGGATAAGCCATTCACATCTAGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTC-TCAGTTTCTATATTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCGGAGTTTATGG-ATGGAGT----CGTAGCCAATTTCTGGTTTAAA---------TGATGAAATCTATTCCCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAGGCAAGTTGTATTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaacaacccagggaagtaggcaaggctggGTC-CCCTGGG---------AGCAGAACAGAGAATTGGAGAAC-CAGCACCTGAAAGTAGAACCAGACCGCACGGCCTTCCACCGTAGGGAAGAGCAAGCAGCACCGTAGGGAAGAGCAAGCAGTGATCAAATGTGCCCTGC----C-----------------CCTGCTGTGGGACCCAGCACACTCTCATACACTGGGGTTTCGACT--TGCC--AGACTTCAGCTCAAatagcatctgtgtgacactcccgtcctactctgcactc--ctgtggcagacatcacaaatcaatcacagcactccttcttcctgaccctgaattcagtcccaaattccttgtcaagacaatttgtcaatcaggaagacacaaccaaccaacaaacattagcttgtgaagtggaacctgcttgccaGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAGTGTTGCTGGtgaagtcaggcagtcctgggtttcagcttcagctctgtgaatggctagcaaggtggacttgggctagcatttgtgtcactctcag-ctcagctttcccatctgtaaaatggagatgattggtatcaagtggggctggtaaggggattccaggaga i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 474738 880 - 28733288 ACTCTTGGATGAAGTTTTTGGGTCTGG---GATG-TGGCTTTCCTATCTACAAC---ATACTAGGGGGTCCGCGTGGATTGTCAGTGTCC-TCTGTGTTCTGGTCTAGATTTCGCAGTATTTGGCAGAAAGCCTCCAGGGTTTGTGGTTTGGAGC----TGTGG-TGACTTCTGGTTTCAATAAAAAT--TAAGGAAACATATTTCCCCTATAATCAGATTTCTGTTTTATTGTCTTTGGTTGATTTCGAGAGA--CGAGTGGAGTTTAAAT-A---TTCGATGCCATCATTTTTACCTGGAAATTaaatgctttctcatcca-cgtctcttttcatcccaacaccaaccctggtaagtgagcaagatggtgtcaCCCTGGGCTGGATGACAGCAGGGCTGACAACTGGAAGACGCAGAGCCTGAGCACGGCGCAAAACTGCACGGT--------------------------TGCCTTAGATAAGAGCAGGT-GTCCTCACAGGCACCCTGC----CCCGCCGCAGGGAAAAGTCCTGACACATCAGCCAAAACTCTCTCATACTCT-GGGTTTGGGTA--TATTTGAGACTTGTGTGGCAAGTACATCGTACTCACTCTGCTGCCTCCGTGGGCACCAGGCAatggcagacatcactaatcaatcacagggctcttatcc-----ccctgCAT--------------CTTTTCAAGACTACATT----ACAGGAAGACTTTACCAACTGACTGACATTGGCGAGTGAAATGCAACCTATGTGC-------------------CTTTAGCTACATCgagcattgacagaggagccagaaagacctgggttgaattttc-gttctgtg-attactaccagagt-gattcaggcaagtcttt-tctt-ctctaagcctcaactttcctattcgtaaaatgggaatca-tgtcatcacataaagttattagagggaatacacgaga i nomLeu3.chr24 C 0 I 4335 s rheMac3.chr1 33355964 891 + 229590362 GTGTTTGGATAGGCCATTCACATCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTC-TCAGTTTCTGTATTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATGGAGT----CATAGCCAATTTCTGGTTTAAA---------CGATGAAATCTCTTCTCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaccaacccagggaagta-gcaaggctggGTC-CCCTGGG---------AACAGAACAGAGAACTGGAGAAC-CAGCACCTGAGAATAGAACCAGACTGCATGGCCATC----------------------TACCACAGGGAAGAGCAAGCAGTGATCAGAGGTGCCCTGC----C-----------------CGTGATATGGGGCCCAGCACACTCTCATACACTGGGGTTTTGGCT--TGCC--GGACTTCAGCTCAAatagcatctgtgtggcactcctgtcctactctgcactc--ctgtggcagacatcaccaatcaatcacagcactccttcttcctcaccctgaattcagtcccaaattccttgtcaggaaaatatgtcaatcaagaagacacaatcaaccaaccaacattagcttgtgaaatggaacctgcttgccaGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAATGTTGGTGGtgaagtcaggcagtcctgggtttcaagttcagctctgtgaatggctaacaaggtggacttgggctagcgtttgtgtcactctcagcctcagctttcccatctgtaaaatggagatgattggtatcaagtgggcctggtaaggggattccaggaga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29867066 891 - 227556264 GTGTTTGGATAAGCCATTCACATCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTC-TCAGTTTCTGTATTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATGGAGT----CATAGCCAATTTCTGGTTTAAA---------CGATGAAATCTCTTCTCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaccaacccagggaagta-gcaaggctggGTC-CCCTGGG---------AACAGAACAGAGAACTGGAGAAC-CAGCACCTGAGAATAGAACCAGACTGCATGGCCATC----------------------TACCACAGGGAAGAGCAAGCAGTGATCAGAGGTGCCCTGC----C-----------------CGTGATATGGGGCCCAGCACACTCTCATACACTGGGGTTTTGGCT--TGCC--AGACTTCAGCTCAAatagcatctgtgtggcactcctgtcctactctgcactc--ctgtggcagacatcaccaatcaatcacagcactccttcttcctcaccctgaattcagtcccaaattccttgtcaggaaaatatgtcaatcaagaagacacaatcaaccaaccaacattagcttgtgaaatggaacctgcttgccaGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAATGTTGGTGGtgaagtcaggcagtcctgggtttcaagttcagctctgtgaatggctaacaaggtggacttgggctagcatttgtgtcactctcagcctcagctttcccatctgtaaaatggagatgattggtatcaagtggggctggtaaggggattccaggaga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32630543 891 + 220367699 GTGTTTGGATAAGCCATTCACACCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGTT-TCAGTTTCTGTATTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATGGAGT----CACAGCCAATTTCTGGTTTAAA---------CGATGaaatctcttctctct--------tttcatcttgtgCTGTCTTCAGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCAAGGGCCTTCTCATCCATCACCTCTTTCAATCTTAACACCAACCCAGGGAAGTA-GCAAGGCTGGGTC-CCctggg---------aacagaacagagaactggAGAAC-CAGCACCTGAGAATAGAACCAGACTGCATGGCCATC----------------------TACCACAGGGAAGAGCAAGCAGTGATCAGAGGTGCCCTGC----C-----------------CGTGATGTGGGGCCCAGCACACTCTCATACATTGGGGTTTTGGCT--TGCC--AGACTTCAGCTCAAATAGCATCTGTGTGGCACTCCTGTCCTACTCTGTACTC--CTGTGGCAGACATCACCAATCAATCACAGCACTCCTTCTTCCTCACCCTGAATTCAGTCCCAAATTCCTTGTCAGGAAAATATGTCAATCAAGAAGACACAATCAACCAACCAACATTAGCTTGTGAAATGGAACCTGCTTGCCAGACCAGCATTAGAGTCTCTCCAGCTGCTCCCAATGTTGGTGGTGAAGTCAGGCAGTCCTGGGTTTCAAGTTCAGTTCCGTGAATGGCTAACAAGGTGGACTTGGGCTAGCATTTGTGTCACTCTCAGCCTCagctttcccatctgtaaaatggagatgattgGTATCAAGTGGGGCTGGTAAGGGGATTCCAGGAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28146950 891 - 130588469 GTGTTTGGATAAGCCATTCACATCTGGAGAGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGTTTTTGTGGGCC-TCAGTTTCTGTATTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTAGGG-ATGGAGT----CATAGCCAATTTCTGGTTTAAG---------CGATGAAATCTCTTCTCTCT--------TTTCATCTTGTGCTGTCTTCGGTTGGTTTTGAGAGAAGCAAGTTGTGTTTAAATGA---CTC---TCCATCCTTTTCACCTGGACATCaagggccttctcatccatcacctctttcaatcttaacaccaacccagggaagta-gcaaggctggGTC-CCCTGGG---------AGCAAAACAGAGAACTGGAAAAC-CAGCACCTGAGAATAGAACCAGACTGCATGGCCATC----------------------CACCACAGGGAAGAGCAAGCAGTCATCAAAGGTGCCCTGC----C-----------------CGTGATGTGGGGCCCAGCACACTCTCATACACTGGGGTTTTGGCT--TGCC--AGACTTCAGCTCAAatagcatctgtgtggcactcctgtcctactctgcactc--ctgtggcagacatcaccaatcaatcacagcactccttcttcctcactctgaattcagtcccaaattccttgtcaggaaaatatgtcaatcaagaagacacaatcaaccaaccaacattagcttgtgaaatggaacctgcttgccGGACCAGCTTTGGAGTCTCTCCAGCTGCTCCCAATGTTGGTGGtgaagttaggcagtcctgggtttcaagttcagctctgtgaatggctaacaaggtggacttgagctagcatttgtgtcactctcagcctcagctttcccatctgtaaaatggagatgatTGGTTTTAAGTGGGGCTGGTAAGGGGATTCCAGGAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64605914 878 + 155834243 GTGTTTGGATAAGCTGTTCACATCTGGAGGGATGTTGAATGACCACTATTCAAA---GCTCAAGGAAGT------------TCAGTTTCTGTGTTTGCTCTGGTCTAGGTTTCACAGGTCCTGGCAGAAAGGCTTCAGAGTTTATGG-ATAGAGT----CGTAGCCAATTTCTGGTTTAAATAA------TGATGAAATCTATTATCTCT--------TTCTATCTTGTGCTGTCTTCAGTTGGTTTTCAGAG--GCAAGTTGTGTTTAAACTA---CTC---TCCATCCTTTCCACCTCGACATCaagggccttctcattcatcccctctttcaatcttaacaccaacccagggaagtaggcaaggc-gggtC-TCCTGAG---------AGCAGAACAGAGAATTGGAGAAC-TGGCACCTGAAAGTAGAACCAGACTGCACAGCCATC----------------------CATCACAGGGAAGAGCACACAGTACTCAAAGGTGTCCTGC----C-----------------CCTGATGTGGGACCCAGCACAC--TCATAGCCTGGGGTTTTGGCT--TGCC--AGACTTCCGCTCAAATAGCATCCCTGTAAAACTCCTGTCCTGCTCGGCACTc--ctgtggcagacatcaccaatcgatcacagcactccttcttcctgaccctcaattcagtcccaaattcctcgtcaagaaaataggtcaatcgagaagacacaaccaaccgaccagcattagcttgtgaaatggaacctgcttgccaGACCAGCATTAAAGTCTCTCCAGCTGCTCCAAATGTTGGTGGtgaagtcaggcagtcctgagtctcaactttagctctgtgaatggctaacaaggtagacttgggttagcatttgtgtctctctcagcctcagctttcccatctgtaaaatggaaatgggtggtatcga-tgggggtggtaagaggattccatgaga i calJac3.chr7 I 137 C 0 s canFam3.chr2 14988504 822 - 85426708 GTCTCCAGATAAACCTTTCATGTCTGC---GATATTGAA----CATTAAGCCAACTGGCCGGAGGAGGTTTGCGTGGCTTCTCCGTTTCCTCATCTGCTCTGGCCTCCATTTC------CCTGGTGGAACCGCTCCAGCATTTACGG-ATGGACT----AGCAGCCCATTTCTGAGCTAAGTAAGAATGAAAACGAACACTGCTCCCCCT--------ATTTTCCCT---CATTGTTCCATTTGTTCTGGGAGAGGGCAGTTGTGTTTAAGCGAGCCTCC---TCCGTCACCTCCACCTGGATGCCAATG----------------------------------CCAGGCTGGGGAAGTT-GTGGGCTGGGGCT-CCCAGGG----------------CAGAGGACACGAGGACCCAGAGCCTGAGTGGAGAACAAGCCTCTGTGGG--------------------------CATCATAGGCAACAGCAGGCACCATTCCCA-GCGCCCTGTGCCGC-----------------CTCGGGACAGATCCTTGCGTGT-----GACCGGTGGGCTTGGGCCTGTGCA--AGACGTCAGCCTCAAGAGCAAATGCAGGGCACTCCCGCCTGCCCCTGCACTC--CTGCAGCACACACCACTAAT-------------------TCCTGACCCTGAACTCAGTCCCAAGTTCCTTCTCGGGGCAGCATATCAAAC----AGATGCAACCTACCAACTGGCATTGTTTTGTGAGATG-AGCCTGTTTGCCAGAGCAGAACTAGAAAGTCCCCAGCTGCACAAAATGTTGGTGGCAgaggcacagagtcctaggtttgaattccagctctggaaatgactagtggggtggccttaggcaagcgtttttgtcaccctgagccttggttttctcatctgtaaaa-gggggtgattggtatcacagaggaccgttgagggggttacatgaaa i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I a score=133452.000000 s hg38.chr1_KI270760v1_alt 36307 53 + 109528 --aa----gccccatcacgtgacacatagcagatgttcaatgacaggtTTGTACTGGAG s panTro4.chr1 30472147 53 + 228333871 --aa----gccccatcacgtgacacatagcagatgttcaatgacaggtTTGTACTGGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30059822 53 - 229942017 --aa----gccccatcacacgacacatagcagatgttcaatgacaggtttgtACTGGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33356855 53 + 229590362 --aa----gccccagcatgtgacacatagcagatgttcgacgacagagtTGTACTGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29867957 53 - 227556264 --aa----gccccagcatgtgacacatagcaGATGTTCGACGACAGATTTGTACTGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32631434 53 + 220367699 --AA----GCCCCAGCACGTGACACATAGCAGATGTTCAACAACAGATTTGTACTGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28147841 53 - 130588469 --AA----GccccagcacgtgacacatagcagatgttcgacgacagatttgtACTGGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64606792 53 + 155834243 --aa----gctccatcacgtgacacctagcagatgttcaatgaCAGGTGTGTGCTGGGG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14989326 56 - 85426708 agaaccctgacccagcacgtggcac--agcaggtg-tcaatgagaggtCTAGGCTGggg i canFam3.chr2 C 0 I 153 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 475618 4335 - 28733288 I a score=192799.000000 s hg38.chr1_KI270760v1_alt 36360 78 + 109528 AAAAG-----------------------------GCTCTTCTTTTGCTACCGCAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGGATTTATTGGCATGTTGGTAAAGCCA s panTro4.chr1 30472200 78 + 228333871 AAAAG-----------------------------GCTCTTCTTTTGCTACCACAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGGATTTATTGGCATGTTGGTAAAGCCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30059875 77 - 229942017 AAAA------------------------------GCTCTTCTTTTGCTACCACAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGGATTTATTGGCATGTTGGTAAAGCCG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33356908 78 + 229590362 AAAAG-----------------------------GCTCTTCTTTTGGTACCAAAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGGATTTATTGGCATGTTGGTAAAGCCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29868010 78 - 227556264 AAAAG-----------------------------GCTCTTCTTTTGGTACCAAAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGGATTTATTGGCATGTTGGTAAAGCCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32631487 78 + 220367699 AAAAG-----------------------------GCTCTTCTTTTGGTACCAAAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAGAATTTATTGGCATGTTGGTAAAGCCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28147894 78 - 130588469 AAAAG-----------------------------GCTCTTCTTTTGGTACCAAAGATGTTTCCTGATCACCTGATG--------------------------------------ACCAAGATTTATTGGCATGTTGGTAAAGCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64606845 109 + 155834243 AAAAG-----------------------------GCTCTTCTTTTGCTACCACAGACGTTTCCTGATCACCTGATGACCATCTGGCGGCCACTTCTATC-------TAACGGGAACCAGGATTTATTGGCATGTTGGTAAAGCCA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14989535 145 - 85426708 aaaagagaGAGAGATAGGGCTGGACTGAAGATGTGCTTTTCTTTTGTCAGCATGGATGTTTCTTGATCACCTGGGGACCATCCAGTGGCCACTTCTATCACCAGGTTGAGGGGCTCCAGGATTCACTGGTGTAGTGGGAGGGTCT i canFam3.chr2 I 153 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 475618 4335 - 28733288 I a score=2630712.000000 s hg38.chr1_KI270760v1_alt 36438 860 + 109528 -------------------ctgtgtccgagtcccaggtcgcccaagagccagctgtgtcctctggggcaaatcacctcttccctg-------agGGTGGG----AGGAAGT-GGTCAAGGTAGAGCAATGTTGTTCAATCAGGAAAGTGGGATTTTTCTCAATTTCAAACATTCCTTTCAGTGCAGACATTTAACAAATTAA-TTTTTCAAAGACAGTCAGGCATCAACTCACAACACCTGACGCCTCCTACCCC-----C---TTCCCAC-TCTTCCCAGTTTCCTAAGCAAACCCTAGAAGGTCA----CTGTTCCCATGGAGTTAATGGGCCTGGACCCACCTTCTAATTTAATGCAAGTCCCAGCCCGCCTTACTGTGCAGGAGTTTGAACTCTCAGTTCGTCTGAACTCTCTCGGCGACACAATCTGTCCTCGTTTCCAGTAGAGTTTCTAATCCCTGCAACTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTGAAGCACAGAGATTCTGCATCTTGTCTGTGAGATTACACACTTTAATGGAGTTTATTAAATTTATTTTGCAATTACTgaggagatgaaattcactgtgcagttccagagggcaaaacaaggactggttggtggaatccaccaggagacagcttggaattcaaagggaagaagaactttctgatggtcagagccactcagcatggagtgagccatc-ccaggg---cag-ggtgagGCCAGCAGGGCTCAG-GCCTGA---GGTCACTGTTGGGGGAGCCAGTGAAATATAAGAGCTTTGAGTCAAGCTTGGGTCCATTTTCTGACTCCCCACTTCCAGGGGGA-TCGGGCAACTGAGTTCACTTTTGTAAGCCTCTAGGCT-CCCTG----------GGTAAGATGGTAACAGCTGTG-CTGGCACA s panTro4.chr1 30472278 860 + 228333871 -------------------ctgtgtcagagtcccaggtcgcccaagagccagctgtgtcctctggggcaaatcacctcttccctg-------agGGTGGG----AGGAAGT-GGTCAAGGTAGAGCAATGTTGTTCCATCAGGAAAGTGGGATTTTTCTCAATTTCAAACATTCCTTTCAGTGCAGACATTTAACAAATTAA-TTTTTCAAAGACAGTCAGGCATCAACTCACAACACCTGACACCTCCTACCCC-----C---TTCCCAC-TCTTCCCAGTTTCCTAAGCAAACCCTAGAAGGTCA----CTGTTCCCATGGAGTTAATGGGCCTGGACCCACCTTCTAATTTAATGCAAATCCCAGCCCGCCTTACTGTGCAGGAGTTTGAACTCTCAGTTCGTCTGAACTCTCTTGGCGACACAATCTGTCCTCGTTTCCAGTAGAGTTTCTAATCCCTGCAACTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTGAAGCACAGAAATTCTACATCTTGTCTGTGAGATTACACAGTTTAATGGAGTTTATTAAATTTATTTTGCAATTACTgaggagatgaaattcactgtgcagttccagagggcaaaacaaggactggttggtggaatccaccaggagacagcttggaattcaaagggaagaagaactttctgatggtcagagccactcagcatggagtgagccatc-ccaggg---cag-ggtgagGCCAGCAGGGCTCAG-GCCTGA---GGTCACTGTTGGGGGAGCcagtgaaatataagagctttgagtcaagcttgggtccattttctgactccccacttccaggggga-tcgggcaactgagttcactttcgtaagcctctaggct-ccctg----------ggtaagatggTAACAGCTGTG-CTGGCACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30059952 855 - 229942017 -------------------CTGTGTCCGAGTCCCAGGTTGCCCAAGGGCCAGCTGTGCCTTCTGGGGCAAATCACCTCTTCCCTG-------AGGGTGGG----AGGAAGT-GGTCATGATAGAGCAATGTTCTTCAATCTGGAAAGTGGGATTTTTCTCAATTTCAAACATTCCTTTCAGTACAGACACTTAACAAATTAA-TTTTTCAAAGA----CAGGCATCAACTCACAACACCTGACACCTCCTACCCC-----C---TTCCCAC-TCTTCCCGGTTTCCTAAGCAAACCCTAGAAGGTCA----TTGTTCTCATGGAGTTAATGGGCCTGGACCCACCTTCTAATTTAATGCAAATCCCAGCCCGCCTTACCGTGCAGGAGTTTGAACTTTCAGTTCATTTGAACTCTCTCGGCGACACAATCTGTCCTCGTTTCCAGTAGAGTTTCTAATCCCTGCAACTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTGAAGCACAGAAATTCTGCATCTTGTCTGTGAGATTACACACTTTAATGAAGTTTATTAAATTTATTTTGCAATTACTGTGgagatgaaattcactgtgcagttccagaaggcaaaacaaggactggttggtggaatccaccaggagacagcttggaattcaaagggaagaagaactttctgatggtcagagccactcagcatggagtgagccatc-ccaggT---CAG-GGTGAAGCCAGCAGGGCTCAG-GCCTGA---GGTCACTGTTGGGGGAACcagtgaaatataagagctttgagtcaggcttgggtccattttctgactccccacttccaggggga-tcgggcaactgagttcacttttgtaagcctctacgct--cctg----------ggtaagatggTAACAGCTGTG-CTGACACA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 479953 848 - 28733288 -------------------ctatattctagtcctaggtc-cccatggaccagctgtgtgaccttagacaagtctctgacttcctgggAACGTGGGGTGGA----AGGAAGGAGGTGATGGAAGAGGAATG---------CCTGAAAGTGAGGTGAGTCAC-----CATGAACTCCG--------AGGTATACAATGAATTAA-TTTTTCAAAGAGAGGCTGCCACCAACTCACATCACCCGACACACCCCATCCCAACTTT---CTCTTAC-CCCTCCCAGTTTCCTAAGCAAATCCTAGAAGGTCA----CTGTCCCCATAAAATCAATGGGCCTGGACTTGCCTCCTAATTTAATGCAAATCCAAGCCTGTCTTATTGTGCTGGAGTT-------TCTGTTCATTTCAACTTTCTTGGTGACAAAATCCATCCTCATTTCCAGTTGAGTTTCTAATCCCTGAAATTTCCATGGTGCTAGTAATTATGG----GGAAAAGTCTGAAGCACAGAAATTCTGCATCCTGCCTATGAGATTACACACTTTAGTCGAGTTTATTAAATGTATTTTGCAGTTACTgaggagatgaaactcactgtacaactccagagggcaaagcaaggactggttcatagaatccaccaggaggcagcttggaattcaaagggaagaagcattttctgacagtcagagccgctcagcacggagtgagccatc-ccaagagACTAG-GGTGAGGCTGGCAGGGCCCAG-GCCTGG---GGTggtcaaagtgggggccaatgaagtgcaagggctttgggtcagacctgggttcatttcctcactgcccactttcctagggattcaggcaagtgagctcacttttgtaagccttggttcccccttg----------agtaagatggtgacagctgtg-ctggccca i nomLeu3.chr24 I 4335 I 1517 s rheMac3.chr1 33356986 855 + 229590362 -------------------CTGTGTCCGAGTCCCAGGTCTCCCAAAGGCCAACAGTGTCCTCTGAGGTAAACCCCCTCTTCCCTG-------AGGGTGGG----AGGAAGT-GGCCATGGTAGAGCAATGTTCTTCAATCTGGAAAGTGGGATTTTTCTCAATGTCAAACATTCCTTTCAGTACAGACTTTTAACAAATTAA-TTTTTCAAAGACAGTCTGTCATCAACTCACAACACC-GACACTTCCTACCTC-----C---TTCCCAC-TCTTCCCAGTTTCTTAAGCAAACCCT---AGGTCA----CTGTTCCCGTGGAGTTAATGGGCCTGGACCCACCTTCCAATTTTATGCAAATCCCAGCCCACCTTATTGTGCAGGAGTTTGAACTCTCAGTTCATTTGAACTCTCTTGGCAACACAATCTGTCCTCGTTTCCAGTAGAGTTTCCAATCCCTGCAATTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTTAAGCACAG-AATTCTGCATCTTGTCTGTGAGGTTACACACTTTAATGGAGTTTATTAAATTTATTTTGCAGTTACTgaggagatgaaattctctatgcagttccagagggcaaaacaaggactggttggtggaatccactaggagacagcctggaattcaaagggaagaagcactttctgatggtcagagccactcagcatggagtgagccatc-ccaggt---cag-ggtgagGCCAGCAGAGCTCAG-GCCTGA---GGTCACTGTTGGGGGAACcagtgaaatataagaactttgagtcaggcttgggttcatttcctgattccccacttccacgggga-tcgggcaagtgagttcacttttgtaagcctctcggct-ccctg----------ggtaagatggtaacagctgtg-ctgGCAAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29868088 855 - 227556264 -------------------CTGTGTCCGAGTCCCAGGTCGCCCAAAGGCCAACAGTGTCCTCTGAGGTAAACCCCCTCTTCCCTG-------AGGGTGGG----AGGAAGT-GGCCATGGTAGAGCAATGTTCTTCAATCTGGAAAGTGGGATTTTTCTCAATGTCAAACATTCCTTTCAGTACAGACATTTAACAAATTAA-TTTTTCAAAGACAGTCTGTCATCAACTCACAACACC-GACACTTCCTACCTC-----C---TTCCCAC-TCTTCCCAGTTTCTTAAGCAAACCCT---AGGTCA----CTGTTCCCATGGAGTTAATGGGCCTGGACCCACCTTCCAATTTTATGCAAATCCCAGCCCACCTTATTGTGCAGGAGTTTGAACTCTCAGTTCATTTGAACTCTCTTGGCAACACAATCTGTCCTCGTTTCCAGTAGAGTTTCTAATCCCTGCAATTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTTAAGCACAG-AATTCTGCATCTTGTCTGTGAGATTACACACTTTAATGGAGTTTATTAAATTTATTTTGCAGTTACTGAGgagatgaaattctctatgcagttccagagggcaaaacaaggactggttggtggaatccaccaggagacagcctggaattcaaagggaagaagcactttctgatggtcagagccactcagcatggagtgagccatc-ccaggt---cag-ggtgagGCCAGCAGAGCTCAG-GCCTGA---GGTCACTGTTGGGGGAACcagtgaaatataagaactttgagtcaggcttgggttcatttcctgattccccacttccacgggga-tcgggcaagtgagttcacttttgtaagcctctcggct-ccctg----------ggtaagatggTAACAGCTGTG-CTGGCAAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32631565 856 + 220367699 -------------------CTGTGTCCGAGTCCCAGGTCTCCCAAAGGCCAACAGTGTCCTCTGAGGTAAACCCCCTCTTCCCTG-------AGGGTGAG----AGGAAGT-GGTCATGGTAGAGCAATGTTCTTCAATCTGGAAAGTGGGATTTTTCTCAATTTCAAACATTCCTTTCAGTACAGAcatttaacaaattaa-tttttcaaagacaGTCTGTCATCAACTCACAACACC-GACACTTCCTacctc-----c---ttcccac-tcttcccagTTTCTTAAGCAAACCCT---AGGTCA----CTGTTCCCGTGGAGTTAATGGGCCTGGACCCACCTTCCAATTTTATGCAAATCCCAGCCCACCTTATTGTGCAGGAGTTTGAACTCTCAGTTCATTTGAACTCTCTTGGCAACACAATCTGTCCTCGTTTTCAGTAGAGTTTCTAATCCCTGCAATTTCCATGGTGCCAGTAATTATGG----AAAAAAGTCTTAACCACAGAAATTCTGCATCTTGTCTGTGAGATTACACACTTTAATGgagtttattaaatttattttgcagTTACTGAGGAGATGAAATTCTCTATGCAGTTCCAGAGGGCAAAACAAGGACTGGTTGGTGGAATCCACCAGGAGACAGCCTGGAATTCAAAGGGAAGAAGCACTTTCTGATGGTCAGAGCCACTCAGCATGAAGTGAGCCATC-CCAGGT---CAG-GGTGAGGCCAGCAGAGCTCAG-GCCTGA---GGTCACTGTTGGGGGAACCAGTGAAATATAAGAACTTTGAGTCAGGCTTGGGTTCATTTCCTGATTCCCCACTTTCACGGGGA-TAGGGCAAGTGAGTTCACTTTTGTAAGCCTCTCGGCT-CCCTG----------GGTAAGATGGTAACAGCTGTG-CTGGCAAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28147972 852 - 130588469 -------------------GTGTGTCCGAGTCCCAGGTTGCCCAAAGGCCAACAGTGTCCTCTGAGGTAAACCCCCTCTTCCTTG-------AGGGTGGG----AGGAAGT-GGTCATGGTAGAGCAATGTTCTTCAATCTGGAAAGTGGGATTTTTCTCAATTTCAAACATTCCTTTCAGTA------TTTAACAAATTAA-TTCTTCAAAGACAGTCTGTCATCAACTCACAACACCTGACACCTCCTACCTC-----C---TTCCCAC-TCTTCCCAGTTTCTTAAGCAAACCCT---AGGTCA----CTGTTCCCATGGAGTTAATGGGCCTGGACCCACCTTCCAATTTTATGCAAATCCCAGCCCACCTTATTGTGCAGGAGTTTAAACTCTCAGTTCATTTGAACTCTCTTGGCAATACAATCTGTCCTCTTTTCCAGTAGAGTTTCTAATCCCTGCAATTTCCACCGTGCTAGTAATTATGG---AAAAAAAGTCTTAAGCACAGAAATTCTGCATCTTGTCTGTGAGATTACACACTTTAATGGAGTTTATTAAATTTATTTTGCAGTTACTgaggagatgaaattcactgtgcagttccagagggcaaaacaaggactggttggtggaatccaccaggagacagcttggaattcaaagggaagaagcactttctgatggtcagagccactcagcatggagtgagccatc-ccaggt---cag-ggtgagGCCAGCAGAGCTCAG-GCCTGA---GGTCACTGTTGGGGGAACCAGTGAAATATAAgaattttgagtcaggcttgggttcatttcctgattccccactttcacgggga-tcaggcaagtgagttcacttttgtaagcctctcggct-ccctg----------ggtaagatggTAACAGCTGTG-CTGGCACA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64606954 854 + 155834243 -------------------ctgtgtctgagtcctgggtcttccaagggccagctgtgtcttctggggcaaatcacctcttccctg-------agGGTGGG----AGAAAGA-GGTCGTGGTAAAGCAATATTGTTCAACCTGGAAAGTGGGATTTGTCTCAATTTCGAACATTCCTTTCAGTACAGACATTCAACAAATTAA-TTTTTCAAAG----TCCGCTACCAACTCACAACACCTAACACCTCCCACCCC-----C---TTCCCAC-TCTTCCCAGTTTCCTAAGCAAACCCTAGAAGATTA----TTGTTCCCATGGAGTTAATGGGCCTGGACCCACCTGCTAATTTAATGCAAATCC-AGCCTGCCTTATTTTGCAGGAGTTTGAACTCTCAGTTTATTTGAACTCTCTTGGCAACAAAATCTGTCCTCATTTCTAGTAGAGTTTCTAATCCCTGCAATTTCCATGGTGCTAGTAATTATGG----AAAAAAGTCTGAAGCACAGAAATCCTGCATCTTGTCTATGAGATTACACACTTTAATGGAGTTTATTAAATTTATTTTGCAGTTACTgaggagatgaaattcactgtgcagttccagagggcaaaacaaggactggttgatggaatccaccaggagacagtgtggaattcaaagggtagaagcactttctgatggtcagagtcactcggcctggagtgagccatc-ccaggaggtCAG-GATGAGGCTGGCAGGGCTCGG-GCCTGAGGTGGTCGCTGTTGGGggag-cagggaaatgtaagcgctctgaatcagacctgggttcatttcctgactctccacttccagggaga-tctgccaagtgagttcacttttgtaagcc------CT-CCCTG----------GGTGAGACGGTAAGAGCTGTG-CTGATACA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14989680 876 - 85426708 CTGCTGGAGAGTCAGAGACCCGTGTTCAGTTCCTAGGACTCTGGTGGACTCATCGTGTGCTGGGGAGCAAGCCCCTTCCTCCCTT-------GGGGTGAGGCATAGGGAGG-GATGGTGGAGCAGGAGCACTGTCCCACCTGGAAA-TGGGATCAACCTGGATCTCCGATGTTCCTTTC-----AGAGAGTTAACACATCAATTTTTTTAAAGATGGGCTGCCACCAGATCACCACACTCAACCCCCCCCCCCCC-----CCGATCCCTGCATTTTGCTCATTTGCTAAACAAACCCCAGAAGGTCACCGTCTGTCCCGACAGAGTTAATGGGCACAGACCTGCCTCCTTATTTTATGCAAATCCCAGCCTGCCTTATCGTGCAGGGGTT-------TTGGTTCATCTGTGCTTTCTTGGTGACACAATCCATCCCCGTCTCCAGCCGAGTCTCTAATCCATGCAATTTCCATGGTGCTAATAATTATGAAAAAAAAAAAGTCTGAAGCACAGAAATTTTTCACCCTGCCTATGAGATTACACACCTTAATGGAGTTTATTAAATTTATTTTGCAGTCACTGAGGAGATTAAGCTCA-TGTGCAGCTCCAGGACCC--------------CTGGGAGAATCTGGCA------AGGCTGGAGTTCAAAGGGAAGAAGCACTCCCTGAT-GTCGGAGCCAGTTGGCACCAAGTGAGTCACCTCCAGGAGGCCAGCGGCCAAGCCAGCCGCGTACAGAGCCTGGTGTGGTCACTgtggggga---cggtgaagaaccggtgctgtgggtcatatctgggtccgtttcctgactcacatctctcaggagta-t-ggatgagtgagacaacttttctaagcccct-ggct-ccctgtttccttctctggatgccggtgacagtcatacctagcaca i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I a score=54907.000000 s hg38.chr1_KI270760v1_alt 37298 19 + 109528 GAGCGATGCTCCATGAGGG s panTro4.chr1 30473138 19 + 228333871 GAGTGATGCTCCATGAGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30060807 19 - 229942017 GAGCGATGCTCCATGAGGG i ponAbe2.chr1 C 0 I 366 s rheMac3.chr1 33357841 19 + 229590362 GAGCAATGCTCCATGAGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29868943 19 - 227556264 GAGCAATGCTCCATGAGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32632421 19 + 220367699 GAGCAATGCTCCATGAGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28148824 19 - 130588469 GAGCAATGCTCCATGAGGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64607808 19 + 155834243 GAGCAATGCTCCATGAGGG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14990556 19 - 85426708 gagtgatcctttgtgagCG i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 480801 1517 - 28733288 I a score=10335.000000 s hg38.chr1_KI270760v1_alt 37317 5 + 109528 GTTAT s panTro4.chr1 30473157 5 + 228333871 GTTAC i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33357860 5 + 229590362 GTTAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29868962 5 - 227556264 GTTAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32632440 5 + 220367699 GTTAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28148843 5 - 130588469 GTTAC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64607827 5 + 155834243 GTTAC i calJac3.chr7 C 0 C 0 s canFam3.chr2 14990575 5 - 85426708 GTCAT i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 480801 1517 - 28733288 I e ponAbe2.chr1 30060826 366 - 229942017 I a score=496576.000000 s hg38.chr1_KI270760v1_alt 37322 198 + 109528 GCTGTTATTTCATTACTCCGAGGTAGGCGGAAACTTCCTTCACTCATAGTTTCCCTGGGGAGAGATTTCCCCCAGACACCACTGCCCTCCACCTCCCACCAAAAGGTC--GTGAGTTTGAGGAAGAGCAGGACAAGCTCAC--------TGctcattctct-ggagcccagctgcccag--agagctca-cgtctgctctgctcttccaccg s panTro4.chr1 30473162 198 + 228333871 GCTGTTATTTCATTACTCAGAGGTAGGCGGAAGCTTCCCTCACTCATAGTTTCCCTGGGGAGAGATTTCCCCCAGACACCACTGCCCTCCACCTCCCACCAAAAGGTC--gtgagtttgaggaagagcaggacaagctcac--------tgctcattctct-ggagcccagctgcccag--agagctca-tgtctgctctgctcttccactg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30061192 198 - 229942017 GCTGTTATTTCATTACTCAGAGGTAGGCGGAGGCTTTCCTCACTCATAGTTTCCCTGGGGAGAGATTTCCCCCAGACACCACTGCCCTCCACCTCCCGCCAAAAGGTT--gtgagtttgaggaagagcaggacaagctcac--------tgctcattctct-ggagcccagctgcccag--agagctca-tgtctgctctgctcttccaccg i ponAbe2.chr1 I 366 C 0 s rheMac3.chr1 33357865 198 + 229590362 GCTGTTATTTCATTACTCAGAGGTAGGGGGAGACTTCCCTCACTCATAGTTTCCCTGGGAAGAGATTTCCCCCAGGCACCACTGCCCTCCACCTCCCACCAAAAGGTT--GTGAGTTTGAGGTAGATCAGGACAAGCTCGC--------TGCTCATTCTCT-GGAGACCAGATGCCCAG--AGAGCTCA-TGTCTGCTCTGCTCTTCCACCG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29868967 198 - 227556264 GCTGTTATTTCATTACTCAGAGGTAGGGGGAGGCTTCCCTCACTCATAGTTTCCCTGGGAAGAGATTTCCCCCAGGCACCACTGCCCTCCACCTCCCACCAAAAGGTT--GTGAGTTTGAGGTAGATCAGGACAAGCTCGC--------TGCTCATTCTCT-GGAGACCAGATGCCCAG--AGAGCTCA-TGTCTGCTCTGCTCTTCCACCG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32632445 198 + 220367699 GCTGTTATTTCATTACTCAGAGGTAGGGGGAGGCTTCCCTCACTCATAGTTTCCCTGGGAAAAGATTTCCCCcaggcaccactgccctccacctcccaccaaaAGGTT--GTGAGTTTGAGGTAGATCAGGACAAGCTCGT--------TGCTTATTCTCT-GGAGACTAGCTGCCCAG--AGAGCTCA-TGTCTGCTCTGCTCTTCCACCG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28148848 198 - 130588469 GCTGTTATTTCATTACTCAGAGGTAGCGGGAGGCTTCCCTCACTCATAGTTTCCCTGGGAAGAGATTTCCCGCAGGCACCACTGCCCTCCACCTCCCACCAAAAGGTT--GTGAGTTTGAGGTAGATCAGGACAAGCTCGT--------TGCTCATTCTCT-GAAGACCAGCTGCCCAG--AGAGCTCA-TGTCTGCTCTGCTCTTCCACCG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64607832 206 + 155834243 ACTGTTATTTCATTACTCAGAGGTAGGGGGAGGCATCCCTCACTCATAGTTACCCCGAGCAGAGATTTCCCCCAGACACCACTGCCCTCCACCTCCCGCCAAAAGGTT--GTGAGTTTGAGGCAAAGCAGGTCAAGCTCCCTTGGCCAGTTCTCACTCTCT-GGAACCCAGCTGCCCAG--AGAGCTCC-TGTCTGCCCTGCTCTTTCACCG i calJac3.chr7 C 0 I 317 s canFam3.chr2 14990580 187 - 85426708 GCTATGATCTCATTATTTAGACTT-GGAGGAGCTTCTTCCCACCCCTA----------------CCATCCCCCAGATACCTTGGCC-----TCTCTACCCATAGAGCTGAgtgagtttgaggaggagcaggagcaacttgcccttc---tgctctctctttgggagcctggatgctggagtggggctcaccatctgccctgcttccccactg i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 480801 1517 - 28733288 I a score=1382371.000000 s hg38.chr1_KI270760v1_alt 37520 527 + 109528 ccagaggttttgtagcaacagccccaatatcctgaccacaggggagcctggagggaggtcaacac-acatctgatggtgagttcctccctgtctggtcctagggtctgcaggggaggtccacatgccctcaagggtgagcccctttctccaacatcagctctatcTCCATTGGCCACATCCTACATCCTCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCCAGCATGCATTATTGTCACAGGGGCTGTGAGCTTGGGACACCCACTTATGACACAGCCAACATCAGgtctctattcctagaacatcctctccactaaagcaagaaccacaagatgaatcttcctcactgtttctccagccacca-caaagtgccaggcacactcatagatgttcaataaatactgctgaGcatgttaattttaccaccatcacagggatatgagtaaaggctctgggagcacagactaggggcacataactcatgtggcagggag-agggagcactgggg s panTro4.chr1 30473360 527 + 228333871 ccagaggttttgtagcaacagccccaatatcctgaccccaggggagcctggagggaggtcaacac-aagtctgatggtgagttcctccctgtctggtcctagggtctgcaggggaggtccacatgccctcaagggtgagcccctttctccaacgtcagctctatcTCCATTGGCCACATCCTACATCCTCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCCAGCATGCATTATTGTCACAGGGCCTGTGAGCTTGGGACACCCACTTATGACACAGCCAACATCAGgtctctattcctagaacatcctctccactaaagcaagaaccacaagatgaatcttcctcactgtttctccagccacca-caaagtgccaggcacactcatagatgttcaataaatactgctgaGcatgttaattttaccaccatcacagggatatgagtaaaggctctgggagcacagactaggggcacataactcatgtggcagggag-ggggagcattgggg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30061390 526 - 229942017 ccagaggttttgtggcaacagccccgatatcctgacaacaggggagcctggagggaggtcaacac-acttctgatggtgagttcctccctgtctggtcctagggtCTGCAGGGAAGGTCCACATGCCCTCAAGGGTGAGCCCCTTTCTCCAACTTCTGCTCTATCTCCATTGGCCACATCCTACATCCTCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAAGCCTAAAGCCCCAGCATGCATTATTGTCACAGGGGCTGTGAGCTTGGGACACCCACTGATGACACAGCCAACATCAGGTCTCTATTCCTAGAACATCCTctccactaaagcaagaaccacaagatgaatcttcctcactgtttctccagccacca-caaag-gccaggcacactcatagatgttcaataaatgctgctgaGcatgttaattttaccaccatcacagggatatgagtaaaggctctgggaccacagactaggggcacataactcatgtggcagggag-ggggagcactgggg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33358063 527 + 229590362 CCAGAGGTTTTGTTGCAACAGCCCCCATATCCTGACCACAGGGGAGCCTGGAGGGAGGTCAACAC-ACATCTGATGATGAGTTCCTCCCTGTCTGGTCCTAGAGTCTGCAGGGGAGGTCCACATACCTGCAAGGGTGAGCCCCTTTCTCCAACATCAGCTCTATCTCCATTGGCCACATCCTACATCCCCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCAAGCATGCATTATTATCACAGGGGCTGTGAGCTTGGGACACCCACTGATGACACAGCCAACATCAGgtctctattcctagaacatcctctccactaaagcaagaaccacaagatggatcttccccactgtttctccagctccca-cacagtgccaagcacactcatagatgttcagtaaatacttctgaatatgttaattttaccacaatcacaaggatatgagtaaaggctccaagggcacagactagggtcacataactcacgtggcagggat-ggggagcattaagg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29869165 527 - 227556264 CCAGAGGTTTTGTTGCAACAGCCCCCATATCCTGACCACAGGGGAGCCTGGAGGGAGGTCAACAC-ACATCTGATGGTGAGTTCCTCCCTGTCTGGTCCTAGAGTCTGCAGGGGAGGTCCACATACCTGCAAGGGTGAGCCCCTTTCTCCAACATCAGCTCTATCTCCATTGGCCACATCCTACATCCCCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCAAGCATGCATTATTATCACAGGGGCTGTGAGCTTGGGACACCCACTGATGACACAGCCAACATCAGgtctctattcctagaacatcctctccactaaagcaagaaccacaagatggatcttccccactgtttctccagctccca-cacagtgccaagcacactcatagatgttcagtaaatacttctgaatatgttaattttaccaccatcacagggatatgagtaaaggctccaagggcacagactagggtcacataactcacgtggcagggat-ggggagcattgagg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32632643 522 + 220367699 CCAGAGGTTTTGTTGCAACAGCCCCCATATCCTGACCAC-----AGCCTGGAGGGAGGTCAACAC-ACATATGATGGTGAGTTCCTCCCTGTCTGGTCCTAGGGTCTGCAGGGGAGGTCCACATGCCCGCAAGGGTGAGCCCCTTTCTCCAACATCAGCTCTATCTCCATTGGCCACATCTTACATCTCCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCAAGCATGCATTATTATCACAGGGGCTGTGAGCTTGGGACACCCACTGATGACACAGCCAACATCAGGTCTCTATTCCTAGAACATCCTCTCCACTAAAGCAAGAACCACAAGATGAATCTTCCCCACTGTTTCTCCAGCTCCCA-CACAGTGCCAAGCACACTCatagatgttcagtaaatactTCTGAATATGTTAATTTTACCACCATCACAGGGATATGAGTAAAGGCTCCAGGGGCACAGACTAGGGTCACATAACTCACGTGGCAGGGAT-GGGGAGCATTGAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28149046 527 - 130588469 CCAGAGGTTTTGTAGCAACAGCCCCCATATCCTGACCACAGGGGAGCCTGGAGGGAGGTCAACAC-ACATCTGATGGTGAGTTCCTCCCTGTCTGGTCCTAGAGTCTGCAGGGGAGGTCCACATGCCCGCAAGGGTGAGCCCCTTTCTCCAACATCAGCTCTATCTCCATTGGCCACATCCTACATCCTCTGGGTTTGTCTAGAATAAGGGCCCCCAGTGCTTTT----CCAGGCCTAAAGCCCAAGCATGCATTATTATCACAAGGGTTGTGAGCTTGGGACACCCACTGATGACACAGCCAACATCAGgtctctattcctagaacatcctctccactaaagcaagaaccacaagatgaatcttccccactgtttctccagctccca-cacagtgccaagcacactcatagatgttcaataaatactgctgaatatgttaatTTTACCACCATCACAGGGATATGAGTAAAGGCTCCAGGGGCACAGACTAGGGTCACATAATTCACGTGGCAGGGAG-GGGGAGCATTGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64608355 524 + 155834243 CCAGAGGTTTTATAGCAACAGCCCCCATATCCTGACCACAGGGGAGCCTGGAGGGAGGTCAGCAC-ATGTCTGATGGTGAGTTCTT--CTGCCTGGTCCTAGGGTCTGCAGGGGAGGTCCAAATGCCTGCATGGGTGAGCTCCTTCCTCCAATGTCAGCTTTATCTCCATTGGCCACATCCTGCATTCTCTGGGTTTGTCTTGAATAAGGGCCCCCAGTGCTTTT----CTAGGCCTAAAGCCCCAGCATGCATTATTATCACAAGGGCTGTGAGTTTGGGACACACACTGATGACACAGCCAACATCAGGTTTCTATTCctagaacatcctctccactaaggcaagaaccacaagatgaat-ttccccactgtttctccagcccccagcacggtgccacgcacactcatacacattcaataaatactgctaaaCATGTTAGTTTTACCACGACCCCAGGGATATGAGTAAAGGCT-TGGGAGCACAGAATAGGAGCACATAACTCATGTAGCAGGGAG-GGAAAGCATCAGGG i calJac3.chr7 I 317 C 0 s canFam3.chr2 14990767 506 - 85426708 ccagaggctt-------ata-cacctacaccatgaaactggggatgcctgt-gggggtccagtgctgcttctgatggtaaggtcacccctgtctaatcctcaggtccacagttaaagtccatgtgcccggaggtatgagccccatgctccagc--cagctttatcTCCACCCCTCATGCCCTGGATCCTCT-GGTTGGTTCAGAATCAGGGCAGCAGATGCTTCTATCACACCCCCTAAAGCACCA----GCATTATTATCACAAGGGCTAAGAGCTTTAGACAC-CATAGACAAAATAGCTGACATCAGgtctccgtttctagaacacgcactccccagaggcaagaaccacagcacacatcttcaccactgcaagttca-ccccag-catagagaccagcacgc-aggagacgttcaataaatgatgctaagcaagttcattttaccaccacaacagggttacgtttaagagctcaggggacacagaatgggggcacata--------gaaggggataggagagagttgggg i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 480801 1517 - 28733288 I a score=583304.000000 s hg38.chr1_KI270760v1_alt 38047 192 + 109528 aggacttcctgggacagtgactcctgagctgaagcttcaaggggaagcagagagaaactggtcaaggcagaggtgaCAGTGAGACCAAGTGTGTCAGGAACTAG--AGGGCATC-TCAGAGTCAAGTGTAATACAGGAAATAACCAGAGATGAGGTTGAAGAGTCAGCAGGGGCCACATGGTAAAGAACCTTGAA s panTro4.chr1 30473887 192 + 228333871 aggacttcctgggacagtgactcctgagctgaagcttcaaggggaagcagagagaaactggtcaaggcagaggtgaCAGTGAGACCAAGTGTGTCAGGAACTAG--AGGGCATC-TCAGAGTCAAGTGTAATACAGGAAATAACCAGAGATGAGGTTGAAGAGTCAGGAGGGGCCACATGGTAAAGAACCTTGAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30061916 192 - 229942017 aagacttcctgggacagtgactcctgagctgaagcttcaaggggaagcagagagaaactggtcaaggcagaggtgaCAGTGAGAACAAGTGTGTCAGGAACTAA--AGGGCATC-TCAGAGTCAAGTGTAATACAGGAAATAACCAgagatgaggctgaagagtcagcaggggccatatggtaaagAACCTTGAA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 482318 193 - 28733288 agggcttcctgggagagatggctctgagctgagtcttcaaaatgagacagagagaagagagtccaggcagaggtaacagcaAGACCATGTGTGTCAGAAACCAGCTAGGCAGCC-TGAGCTGGAGGCTCAAGTCAGGGAGTGACAGAAGAAGAGATCAGAGA-TCAGCAGAAGCCCCATGGTAAACAGCCTCAAA i nomLeu3.chr24 I 1517 C 0 s rheMac3.chr1 33358590 193 + 229590362 agggcttcctgggacagtgactcctgagctaacgcttcaaggggaagcagggagaaactggtcaaggcagaggtgaCAGTGAGACCAGGTGTGTCAGGAACTAG--AGGGCAGCTTCAGAGTCAAGTGTAATACAGGAAATAACCAgagatgaggttgaagagtcagcaggggccagatggtaaagaaccttgaa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29869692 193 - 227556264 agggcttcctgggacagtgactcctgagctaaagcttcaaggggaagcagggagaaactggtcaaggcagaggtgaCAGTGAGACCAGGTGTGTCAGGAACTAG--AGGGCAGCTTCAGAGTCAAGTGTAATACAGGAAATAACCAgagatgaggttgaagagtcagcaggggccagatggtaaagaaccttgaa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633165 193 + 220367699 AGGGCTTCCTGGGACAGTGACTCCTGAGCCAAAGCTTCAAGGGGAAGCAGGGAGAAACTGGTCAaggcagaggtgacagtgagaccaGGTGTGTCAGGAACTAG--AGGGCAGCTTCAGAGTCAAGTGTAATACAGGAAATAACCAGAGATGAGGTTGAAGAGTCAGCAGGGGCCAGATGGTAAAGAACCTTGAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28149573 193 - 130588469 AGGGCTTCCTGGGACAGTGACTCCTGAGCTAAAGCTTCGAGGGGAAGCAAGGAGAAACTGGTCAAGGCAGAGGTGACAGTGAGACCAGGTGTGTCAGGAACTAT--AGGGCAGCTTCAGAGTCAAGTGTAATACAGGAAATAACCAgagatgaagttgaagagtcagcaggggccagatggtaaagAACCTTGAA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64608879 192 + 155834243 AGGGCTTCTTTGGAGATAGACCCCTAAGCTGAAGATTCAAGGGGAAGCAGGAAGAAACTGGTCAAGGCATACGTGACAGTGAGACCAGGTGTATCAGGAACTAG--AGGGCAGC-TCAGAGTCAAGCATAATAGAGGAAATAGCCAGAGATGAGGTTGAAGAGTCAGCAGGGGTCAGATGGTAAAGAACATTGAA i calJac3.chr7 C 0 C 0 s canFam3.chr2 14991273 189 - 85426708 aggacctcctaggaggccagctccagagctgaa-ttttaaggggaggcag-gagAAACCTGTCAAGACTGAGGTGACCATGAGACTAGGTGTTTCAGGAACCAG--AGGGCAGCCACAGGGTCAGGAGGAGTTCATGAAGTAAC-AGGAATGAAGGTGGAAGGTCTGCAG-GGCCAGATGATGAGGAGCAATGAA i canFam3.chr2 C 0 I 215 e mm10.chr4 25408079 8631 - 156508116 I a score=1039135.000000 s hg38.chr1_KI270760v1_alt 38239 358 + 109528 AGCCAAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAACATCATTTCCCTCctaacattcatggaatgtctactatgcaccaggcactgtcaaaggcgcttacctgcattaactcattcatacctaacaagaagcctgggaggtagaag-tcagtatcccctccactagcagatgtagaaactgaggcagagggagatgaagtaaatcactaatgtccatgcagcctacccagtggtagaactgtatttatgtgtgaacccaggtgtgcacattctggaacccaagctgttggccactatgctgttctTCAGCAGGAGTAATACAAGAGTCAGGC-TTTATTTCAGAAATGGTGCTCT s panTro4.chr1 30474079 358 + 228333871 AGCCAAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAGCATCATTTCCCTCctaacattcatggaatgtctactacgcaccaggcgctgtcaaaggcgcttacctgcattaactcattcatacctaacaagaagcctgggaggtagaag-tcagtatcccctccactagcagatgtagaaactgaggcagagggagatgaagtaaatcactaatgtccatgcagcctacccagtggtagaactgtatttatgtgtgaacccaggtgtgcacattctggaacccaagctgttggccactatgctgttctTCAGCAGGAGCAATACAAGAGTCAGGC-TTTATTTCAGAAATGGTGCTCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30062108 358 - 229942017 AGCCAAACC----ACAGTTTGGC---ACATCCTTGGGGCCAGTAGAGCATCATTTTCCTCctaacattcatggaatgtctactatgcaccaggcactgtcaaaggcgcttacctgcattaactcattcatacctaacaagaagcctgggaggtagaag-tcagtatcccctccactagcagatgtggaaactgaggcagagggagatgaagtaaattactaatgtccacgcagcctacccagtggtagaactgtatttatgtgtgaacccaggtgtgcatattctggaacccaagctgttggccaccatgctGCTCTTCAGCAGGAGTAATACAAGAGTCAGGC-TTCATTTCAGAAATGGTGCTCT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 482511 306 - 28733288 TTCCAGGCCTGAAAGACTTTAGCCTGAGATTCTTGAG------------CTATTTTTTTCCTGAACctaat----------------------cact-----------tgatgtgtattaactcattgaatcct-acaagaatcctggg-----gatgttcattatcatctccattagcagttgtggaaactgaggcagcgggagtttagggaaattaccaaaaaccacacagcata---agtgacagagaagggagt-----tgaaccagggtgctgagggtctgaaatccatgttcctagcgactacactTTTCTTCGGCAAGGGAGAGAT-AGAGTCAGAT-TTTATTTTAGAAAGAGTCCTCT i nomLeu3.chr24 C 0 I 436 s rheMac3.chr1 33358783 358 + 229590362 agccaAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAGCATCATTTCCCTCctaacattcatggaatgtctactttgcaccggacactgtcaaaggcccttaccggcattaactcattcaagcctagtaagaagtctgggagatagaag-tcagtatcctctccactagcagatgtggaaactgaggcagtgggagatgaagtaaatcactaatgtccacgcagcctacccagtggtagaactgtatttatgcgtgaacccaggtatgcacattctggaacccaagctgttggccactatgctgttctTCAGCAGGAGTAATACAAGAGTCAGGC-TTTATTTCAGAAACGGTGCTCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29869885 358 - 227556264 agccaAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAGCATCATTTCCCTCctaacattcatggaatgtctactttgcaccggacactgtcaaaggcccttaccggcattaactcattcaagcctagtaagaagtctgggagatagaag-tcagtatcctctccactagcagatgtggaaactgaggcagcgggagatgaagtaaatcactaatgtccacgcagcctacccagtggtagaactgtatttatgcgtgaacccaggtatgcacattctggaacccaagctgttggccactatgctgttctTCAGCAGGAGTAATACAAGAGTCAGGC-TTTATTTCAGAAACGGTGCTCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633358 358 + 220367699 AGCCAAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAGCATCATTTCCCTCCTAACATTCATGGAATGTCTACTTTGCAGCGCACACTGTCAAAGGCCCTTACCAGCATTAACTCATTCAAGCCTAGTAAGaagtctgggagacagaag-tcAGTATCCTCTCCACtagcagatgtggaaactgaggcagcggGAGATGAAGTAAATCACTAATGTCCACGCAGCCTACCCAGTGGTAGAACTGTATTTATGTGTGAACCCAGGTATGCACATTCTGGAACCCAAGCTGTTGGCCACTATGCTGTTCTTCAGCAGGAGTAATACAAGAGTCAGGC-TTTATTTCAGAAACGGTGCTCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28149766 358 - 130588469 AGCCAAACC----ACAGTTTGGC---ACATCCTTGGGGCCACTAGAGCATCATTTCCCTCctaacattcatggaatgtctactatgcaccgggcactgtcaaaggcccttaccggcattaactcattcaagcctagtaagaagtctgggagatagaag-tcagtatcctttccactagcagatgtggaaactgaggcagcgggagatgaagtaaatcactaatgtctacgcagcctacccagtggtagaactgtatttatgcgtgaacccaggtatgcacattctggaacccaagctgttggccactatgctgttctTCAGCAGGAGTAATACAAGAGTCAGGC-TTTAATTCAGAAACGGTGCTCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64609071 358 + 155834243 AGCCAGACC----ACAGTTTGGC---ACATCCCTGAGGCCGCTAGAGCATCATTTCCCTCctaacattcatggaatgtctactatgcaccaggcactgtcaaaggcccgtccctgaattaacttgttcaaacctaacaagaagcctgggaggtagaaa-tcagtatcctcttcactggcagatgtggaaacggaggcagagggagatgaagtaaattattaatgtccacgcagcctacccagtggtagaactgtgtttatgcatgagcccaggtatgcacattctggaacccaagctgttggccactgtgctgttctCCAGCAAGAGTAATACAAGAGTCAGGC-TTTATTTCAGAAAGGGTACTCT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14991677 336 - 85426708 AGCCAGGCC----AGAGTCCGAC---ATGTTCCTGAGGCCAGCTGAGCATTGTTTCTC-Cccaatatttatgga---tctgctctgcaccaggcacaccgtaactaccttacctacatgaactcactca------acaagaagcctgggaggtag--g-t-----tcctctccattaaccaatgtagaaactgaggtagagagaggctaggtaaatgaccaaaggccacacagtc-attaagtggtggaactgggatt-----tgaacgtgggagtacaggttctagaacccaagctgtcagctcctacactGCTCTTCAGCAGGAGGAAAATGAGAGTCAAACATGTAGTTCAGAAGGAGGGCTCT i canFam3.chr2 I 215 C 0 e mm10.chr4 25408079 8631 - 156508116 I a score=14856.000000 s hg38.chr1_KI270760v1_alt 38597 5 + 109528 GGGGG s panTro4.chr1 30474437 5 + 228333871 GGGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30062466 5 - 229942017 GGGGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33359141 5 + 229590362 GGGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29870243 5 - 227556264 GGGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633716 5 + 220367699 GGGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28150124 5 - 130588469 GGGGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64609429 5 + 155834243 GGGGG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14992013 5 - 85426708 GAAGA i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 482817 436 - 28733288 I a score=401628.000000 s hg38.chr1_KI270760v1_alt 38602 134 + 109528 CCGGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGATTATCATCC----AAAGAAGGGTGA--------------------CAAGTGGATCAGCCCTAACTGCAGAACATCATTGTGACAGCCTCTCTT s panTro4.chr1 30474442 134 + 228333871 CCAGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGATTATCATCC----AAAGAAGGGTGA--------------------CAAGTGGATCAGCCCTAACTGCAGAACATCATTGTGACAGCCTCTCTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30062471 134 - 229942017 CCAGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGATTATCATCC----AAAGAAGGGTGA--------------------CAAGTAGATTAGCACTAACTGCAGAACATCATTGTGACAGCCTCTCTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 483253 160 - 28733288 CCAGTCCAGAAAGTCGATTTG-G-AACATAAAACTTGAGCCTGGTGATAGATGATAGGTTTAGAAGCAAGTGGCTATAGTCC----AGTGAAGAATGATGCAGTAGCCTTGACCACATCTACCAGGTCATGCTTAGCTGCACAACATTAGTGTGGCAACCTCTCTT i nomLeu3.chr24 I 436 I 1123 s rheMac3.chr1 33359146 134 + 229590362 CTGGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGGTTACCATCC----AAAGAAGGGTGA--------------------GAAGTGGATCAGCACTAACTGCAGAACATCATTGTGACGGCCTCTCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29870248 134 - 227556264 CTGGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGGTTACCATCC----AAAGAAGGGTGA--------------------GAAGTGGATCAGCACTAACTGCAGAACATCATTGTGACGGCCTCTCTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633721 134 + 220367699 CTGGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGGTTACCATCC----AAAGAAGGGTGA--------------------GAAGTGGATCAGCACTAACTGCAGAACATCATTGTGACAGCCTCTCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28150129 134 - 130588469 GTGGTGTGGGAACCTGATTTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGAAGTGAGTGGTTACCATCC----AAAGAAGGGTGA--------------------CAAGTGGATCAGCACTAACTGCAGAACATCATTGTGACAGCCTCTCTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64609434 134 + 155834243 CCAGTGTGGAAATCTGATCTGAG-GTCAAAAGAGTTGAGCTCAGCAAGACA-------TTCAGGAGTGTGTGATTACCACCC----AAAGAAGGGTGA--------------------CAAGTGGATCAGCACTAACTTCAGAGCCTCACTGTGACAGCCTCTCTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14992018 139 - 85426708 CCCATCTGGGAACTGGATTTGAGAGTCAGAAAAGCTGAGTCCATCAAGTCA-------CTCAGCAGTGAGTGGCTGTCATCTGTCAGGAGAGGGAGGA--------------------CAAGTGCATCGGCCCTGACTGTGGAGCGTCAGGGTGGCAGCCTCTCAT i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I a score=221922.000000 s hg38.chr1_KI270760v1_alt 38736 85 + 109528 ACACCACAGCAAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTTAGTCCC-ATGGGTTCAAGATTCT--CTT s panTro4.chr1 30474576 85 + 228333871 ACACCACAGCAAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTTAGTCCC-ATGGGTTCAAGATTCT--CTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30062605 85 - 229942017 ACACCACAGCAAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTTAGTCCC-ATGGGTTCAAGATTCT--CTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33359280 85 + 229590362 ATACCACAGCTAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGGCTCTTAGTCCC-ATGGGTTCAAGATTCT--CTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29870382 85 - 227556264 ATACCACAGCTAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTTAGTCCC-ATGGGTTCAAGATTCT--CTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633855 85 + 220367699 ATACCACAGCTAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTGAGTCCC-ATGGGTTCAAGATTCT--CTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28150263 85 - 130588469 ATACCACAGCTAT---GAGATTCCCAACATTTCAATGAGTCAAAACCTCAGGTCAAGCCTCTTAGTCCC-ATGGGTTCAACATTCT--CTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64609568 87 + 155834243 ACGCCACAGCTAT---GAAATTCCCGACATTTCAATGAGCCAAAGCCTCACGTCAAGCCTCTTAGTCCC-ATGCGTTCAAGATTTGAACTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14992157 86 - 85426708 ACACCGGACCTTCTTAGAGATTCCTAACATCCCAAT---TCCAAATCTCACATTAGCcctctccatccctgagggttcaagactcc--cct i canFam3.chr2 C 0 I 155 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I a score=2414480.000000 s hg38.chr1_KI270760v1_alt 38821 1033 + 109528 GGTTGTTCATACAGCaaaatgaccaggataccattgcaaatcacctgtcataccaataccttcacaatttaaatgagcaaagacaatcaactgatggcaaactccgaggtgagtcagatcctgaaattatctgacaataattttacagcagccaccataaaatgcttccacaatcaattacacgttgtcctgaaatgaatggaaaaacaggaggtctcagcaaagaaataaaagttacaaaaataatccagaaggaaattatagaactgaaaaatgcagttacagaaattttacaaacttgctggatagtagagtggagatgatagaatagaattagtgaacttgaggataaagcaatagaattttcccaacctgaacaacaaagagaatatagaaggaagagcctcaggaacctatgggacaataagaaaagatccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaactattagaagacatatgactgacaatttttcaaaccaggtgaaagaaacaaatctatagatccaagaaactaatcaaataccacagaagataaacagaa--aaaaatcatgccaagacacatgatagtaaaactttaaaactcaggacaaagaaaaaagtcttggaagcagccaaagagaaaccacaaattaccaaattacctaaaagggaacacctattcaaataacaggaggtttctcatttgaaaactatagaagccagaaagaagtggcacaatatttttcaagtgctgaaaaaaatcaatcacaaattctgtatctgatgaaaccatccttaggaaatgggaagggaataaaaacattctcaaacaaagggaaattttaaagtttgccactagcagttttatatttaaaaattggctatgaggaagttcttcaaacagaaaggaaatagtaaaagaagaagtcttggagcattattaaggaagaagaaacaacag-aaaaagcagaaatatgggtacataaatagactattatttttgtc s panTro4.chr1 30474661 1033 + 228333871 GGTTGTTCATACAGCaaaatgaccaggatacaattgcaaatcacctatcataccaataccttcacaatttaaatgagcaaagacaatcaactgatggcaaactctgaggtgagtcagatcctgaaattatccgacaataattttacagcagccaccataaaatgcttccacaatcaattacacgttgtcctgaaatgaatggaaaaacaggaggtctcagcaaagaaataaaagttacaaaaataatccagaaggaaatcatagaactgaaaaatgcagttacagaaattttacaaacttgctggatagtagagtggagatgatagaatagaattagtgaacttgaggataaaacaatagaattttcccaacctgaacaacaaagagaatatagaaggaagagcctcgggaacctatgggacaataagaaaagatccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaactattagaagacatacgactgacaatttttcaaaccgggtgaaagaaacaaatctatagatccaagaaactaatcaaataccacagaagataaacagaa--aaaaatcatgccaagacacatgatagtaaaactttaaaactcaggacaaagaaaaaagtcttggaagcagccaaagagaaaccacaagttaccaaattacctaaaagggaacacctattcaaataacaggaggtttctcatttgaaaactatagaagccagaaagaagtggcacaatatttttcaagtgctgaaaaaaatcaatcacaaattctgtatctgatgaaaccatccttaggaaatgggaagggaataaaaacattctcaaacaaagggaaattttaaagtttgccactagcagttttatatttaaaaattggctatgaggaagttcttcaaacagaaaggaaatagtaaaagaagaagtcttggagcattattaaggaagaagaaacaacag-aaaaagcagaaatatgggtacataaatagactattatttttgtc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30062690 1032 - 229942017 GGTTGTTCGTACAGCaaaatgaccaggatacaattgcaaatcacccatcataccaataccttcacaatttaaatgagcaaagacaatcaactgatggcaaactccgaggtgagtcagatcctgaaattatctgacaataactttacagcagccaccataaaatgctttcataatcaattacacattgtcctgaaatgaatggaaaaataggaagtctcagcaaagaaatcaaagttacaaaaataatccagaaggaaattatagaactgaaaaatgcagttacagaaattttacaaacttgctggatagtagagtggagatgatagaatagaattagtgaacttgaggataaaacaatagaattttcccaacctgtacaacaaagagaatacagaaggaagagcctcaggaacctatgggacaataagaaaagatccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaactattggaagacatatgactgacaacttttcaaaccgggtgaaagaaacaaatctatagatccaagaaactaatcaaataccacagaagataaacagaa--aaaaatcatgccaagacacatgatagtaaaattttaaaactcaggacaaagaaaaaagtcttagaagcagccaaagagaaaccacaaattaccaaattacctaaaagggaacacctattcaaataacaggaggtttctcatttgaaaactataaaagccagaaagaagtggcacaatatttttcaagtgctgaaaaaaatcaatcacagcttctgtatctgatgaaaccatccttaggaaatgggaaggcaat-aaaacattctcaaacaaagggaaattttaaagtttgccattagcagttgtatatttaaaaattggctatgaggaagttcttcaaacagaaaggaaataataaaagaagaagtcttggagcattattaaggaagaagaaacaacag-aaaaagcagaaatatgggtacataaatagaccattatttttgtc i ponAbe2.chr1 C 0 I 8 s rheMac3.chr1 33359365 1030 + 229590362 GGTTGTTGGTACAGCaaaatgaccaggatacaattgcaaatcacctgtcataccaatacctccacagtgtaaatgagcaaagacaatcaattgatgacaaactccaaggtgagtcagatcctgaaattatctgacaatgattttacagcagccatcataaaatgcttccataatccattacacattgtcctgaaatgaatggaaacataggaagtctcagcaaagaaataaatgttacgaaaataatccagaaggaaattatagaactg-aaaatgcagttacagaaattttacaaacttgctgtatagtagagtgaagatgacagaatagaattagtaaacttgaggataaaacaatataattttcccaacctgaacaacaaagagaatatagaaggaagagtctcaggaactcgtaggacaataagaaaagttccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaagtattggaacacacatgactggaaacttttcaaacctggtgaaagaaacaaatctatagatccaagaaactaaccaaataccacagaagataatcagaa--aaaaatcatgccaaaacacatgatagtgaaactttaaaactcagcacaaagaaaaaagtcctggaagcagtcaaagagaaaccacaaattatcaaattacctaaaagggaacacctattcaaataacaggaagtttctcatttgaaaactatagaagccagaaagaagtggcacaatatttttcaagtgctgaaaacaatcgatcacaaattctgtatctgatgaaaccatccttaagcaatgggaagagaataaaaacattcgcaaacaaagggaaattttaaagttttccactagcggttgtatatttaaaaattggttatgaggaagttcttcaaacagaaagaaaataataaaagaagaaatcttgcagcattagtaaggaagaagaaacaacag-aaaaagcagaaatatgggtacataaatagactat--tttttgtc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29870467 1030 - 227556264 GGTTGTTGGTACAGCaaaatgaccaggatacaattgcaaatcacctgtcataccaatacctccacagtgtaaatgagcaaagacaatcaactgatgacaaactccaaggtgagtcagatcctgaaattatctgacaatgattttacagcagccatcataaaatgcttccataatccattacacattgtcctgaaatgaatggaaacataggaagtctcagcaaagaaataaatgttacgaaaataatccagaaggaaattatagaactg-aaaatgcagttacagaaattttacaaacttgctgtatagtagagtgaagatgacagaatagaattagtaaacttgaggataaaacaatataattttcccaacctgaacaacaaagagaatatagaaggaagagtctcaggaactcgtaggacaataagaaaagttccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaagtattggaacacacatgactggaaacttttcaaacctggtgaaagaaacaaatctatagatccaagaaactaaccaaataccacagaagataatcagaa--aaaaatcatgccaaaacacatgatagtgaaactttaaaactcagcacaaagaaaaaagtcctggaagcagtcaaagagaaaccacaaattatcaaattacctaaaagggaacacctattcaaataacaggaagtttctcatttgaaaactatagaagccagaaagaagtggcacaatatttttcaagtgctgaaaacaatcgatcacaaattctgtatctgatgaaaccatccttaagcaatgggaagagaataaaaacattcgcaaacaaagggaaattttaaagttttccactagcggttgtatatttaaaaattggttatgaggaagttcttcaaacagaaagaaaataataaaagaagaaatcttggagcattagtaaggaagaagaaacaacag-aaaaagcagaaatatgggtacataaatagactat--tttttgtc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32633940 1030 + 220367699 GGTTGTTGGTACAGCAAAATGACCAGGATACAATTGCAAATCACCTATCATACCAATACCTCCACAGTGTAAATGAGCAAAGACAATCAACTGATGACAAACTCCAAGGTGAGTCAGATCCTGAAATTATCTGACAATGATTTTACAGCAGCCATCATAAAATGCTTCCATAATCCATTACACATTGTCCTGAAATGAATGGAAACATAGgaagtctcagcaaagaaataaacGTTACGAAAATAATCCAGAAGgaaattatagaactg-aaaatGCAGTTACAGAAATTTTACAAACTTGCTGTATAGTAGAGTGAAGATGACAGAatagaattagtgaacttgaggataaaacaatataattttccCAACCTGAACAACAAAGAGAATATAGAAGGAAGAGTCTCAGGAACTCGTAGGACAATAAGAAAAGTTCCAACATTCATACAATCAGAAgtcaagaaaaggagaaagagaataaaggtCTGAAAGTATTGGAACACACATGACTGGAAACTTTTCAAACCTGGTGAAAGAAACAAATCTATAGATCCAAGAAACTAACCAAATACCACAGaagataatcagaa--aaaaatcatgcCAAAACACATGATAGTGAAACTTTAAAACTCagcacaaagaaaaaagtcttggAAGCAGTCAAAGAGAAACCACAAATTATCAAATTACCTAAAAGGGAACACCTATTCAAATAACAGGAAGTTTCTCATTTGAAAACTATAGAAGCCAGAAAGAAGTGgcacaatatttttcaagtgctgaaaacAATCGATCACAAATTCTGTATCTGATGAAACCATCCTTAAGCAATgggaagagaataaaaacattctcaaacaaagggaaattttaaagttttccacTAGcagttgtatatttaaaaattggttatGAGGAAGttcttcaaacagaaagaaaataataaaagaagaaatcttgGAGCATTAGTAAGGaagaagaaacaacag-aaaaagcagaaatatgGGTACATAAATAGACTAT--TTTTTGTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28150348 1031 - 130588469 GGTTGTTGGTACAGCaaaatgaccaggatacaactgcaaatcacctgtcataccaatacctccacagtgtaaatgagcaaagacaatcacctgatgacaaactccaaggtgagtcagatcctgaaattatctgacaataattttacagcagccatcataaaatgcttccataatccattacacattgtcctgaaatgaatggaaacataggaagtctcagcaaagaaataaatgttacgaaaataatccagaaggaaattatagaactg-aaaatgcagttacagaaattttacaaacttgctgtatagtagagtgaagatgacagaatagaattagtgaacttgaggataaaacaatataatcttcccaacctgaacaacaaagagaatatagaaggaagagtctcaggaactcgtaggacaataagaaaagttccaacattcatacaatcagaagtcaagaaaaggagaaagagaataaagggctgaaagtattggaacacacatgactggaaacttttcaaacctggtgaaagaaacaaatctatagatccaagaaactaaccaaataccacagaagatactcagaa--aaaaatcatgccaaaacacataatagtgaaactttaaaactcagcacaaagaaaaaagtcttggaagcagtcaaagagaaaccacaaattaccaaattacctaaaagggaacacctattcaaataacaggaagtttctcatttgaaaactatagaagccagaaagaagtggcacaatatttttcaagtgctgaaaacaatcgatcacgaattctgtatctgatgaaaccatccttaagcaatgggaagagaataaaaacattctcaaacaaagagaaattttaaagttttccactagcagttgtatattttaaaattggttatgaggaagttcttcaaacagaaagaaaataataaaataagaaatcttggagcattagtaaggaagaagaaacaacagaaaaaagcagaaatatgggtacataaatagactat--tttttgtc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64609655 1025 + 155834243 GGTTGTTGGTACAGCaaaatgaccaggatacaattgcaaatcacctgtcataccaataacttca-aatttaaatgaacaaagacgatcaactgatggcaaactctgaggtgaatcaaatcctgaaactatgtgacaataattttacagcagccatcacaaaatgctttcataatcaattacacattgacttgaaatgaatggaaaaatagaaagtcttagcaaagaaacagaagttacaaaaa-agtccagaaggcaattatagaactgaaaaatgcagttacagaaattttacagacttgctggagagtagagtagagatgacagaatagaattggtgaacttgaggatgaaacaacagaatgttcct-acctgaacaacaaagagaatatagaaggaagagcctcaggaacttatgggacaataagaaaagagccaacattcacacaatcagaagtcgagaaaaggagaaagagaataaagggctgaaagtactggaagacatatgactgacaacttttcaaacctggtgaaagaagcaaatctatgaatccaagaaactgaccaaatggcacaaaagataaacagaaataaaaagcatgccaagacacatgatagtaaaactttaaaactcaacacaatg--aatagtcttggaagcagccaaagagaaa-cacgaatttccaaagtacctaaaagagaacgcctattcaaataattggaggtttctcatttggaaactactgaagccagaaagaagtggcacaatatttttcaagtgctgaaaaaaatcaatcacaaattctgtatctgatgaaaccatccttaagaaat-ggaagggaataaaagcattctcaaacaaaggaaaaatttaaagtttgccactagcagttgtatacttaaacactggc--tgaggaagttctccaaacagaaaggaaataataaaagaaggagtcttagagcattagtaaggaagaagaaacaacgg-aaaaagtggaaatatgggaacataaatagactatt-attttgtc i calJac3.chr7 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I e canFam3.chr2 14992243 155 - 85426708 I a score=5068.000000 s hg38.chr1_KI270760v1_alt 39854 17 + 109528 tatttatgtagacaaaa s panTro4.chr1 30475694 17 + 228333871 tatttatgtagacaaaa i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33360395 8 + 229590362 -atgaatgt-------- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29871497 8 - 227556264 -atgaatgt-------- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32634970 8 + 220367699 -ATGAATGT-------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28151379 8 - 130588469 -atgaatgt-------- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64610680 8 + 155834243 -attaatgt-------- i calJac3.chr7 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I e canFam3.chr2 14992243 155 - 85426708 I e ponAbe2.chr1 30063722 8 - 229942017 I a score=1988285.000000 s hg38.chr1_KI270760v1_alt 39871 916 + 109528 tatgacatattttattattgaaagaaaaattatgacaccatctgatacccaagacaatatttgagagtggagaaggtaaagaatctttggttaagaatctaaatacaaggaaggcaggtatccatacttcactt-gaagaggtaaaatgttgataccagtagaaaactataagtctcataagtatatattgtcacaaccagaacaaccactacaaaaactctaccaatagatatatttaaaaatattataaataaatcaatatagaatcctaacaaatgttcatgcaatcttcggaaagacaataaagtaaaaacagaggaatgaaaactaaatatatagcaggaagca---aataataaaggggtaaatttaagtattaac--atcaaaaattacattaaatgttaaaggtataaatacagcaatcaaaagacagagattggaagagtgg-ataaaaaaacacaaccaaattatagactgcttataataaacccacctcaaattcaatgacatagacagtttgaaagatatactatgtaaaaattatctttttaaaaaaacctgataaagtagacttcagcacaaagactattactagagacaaaacagaacactacacaatgataaaaggaccagtccaccaggaagatataaaatcccctcaatatgtgcacaccaaacaacagagttttaaaatccataaaacaaaattgataaagctgacagaacagacaaatccacaattgtagctggacacttcaaaccatacatctctcagcaactgaaagaactactagacagaaaattagcaaagatatagaagatctgaacaacaaaatcaaccagcaaaatctaattgacacatatgggagaaaaatgt-ggtttttttatccactcttccaatctctgccaacaacaccag s panTro4.chr1 30475711 915 + 228333871 tatgacatattttattattgaaagaaaaattatgacaccatctgatacccaagacaatatttgagagtggagaaggtaaagaatctttggttaagaatctaaatacaagaaaggcaggtatccatacttcactt-gaagaggtaaaatgttgataccagtagaaaactataagtctcataagtatatattgtcacaaccagaacaaccactacaaaaactctaccaatagatatatttaaaaatattataaataaatcaatatagaatcctaacaaatgttcatgcaatcttcggaaagacaataaagtaaaaacagaggaatgaaaactaaatatatagcaggaagca---aataataaaagggtaaatttaagtattaac--atcaaaaattacattaaatgttaaaggtataaatacagcaatcaaaagacagagattggaagagtgg-ataaaaaaacacaaccaaattatagactgcttataataaacccacctcaaattcaatgacatagacagtttgaaagatataccatataaaaattatctttttttaaaaacctgataaagtagacttcagcacaaagactattactagagacaaaacagaacactacacaacaataaaaggaccagtccaccaggaagatataaaatcccctcaatatgtgcacaccaaacaacagagttttaaaatccataaaacaaaattgataaagctgaaagaacagaaaaagccacaattgtagctggacacttcaaaccatacatctctcagcaactgaaagaactactagacagaaaattagcaaagatatagaagatctgaacaataaaatcaaccagcaaaatctaattgacacatatgggagaaaagtgt-ggtttttt-acccactcttccaatctctgccaacaacaccag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30063730 912 - 229942017 tttgtcatatttgattattgaaacaaaaattataacaccatctgatacccaagacaatatttgaaagcggagaaggtaaagaatctttggttaagaatctaaatacaaggaaggcaggtatccatacttcactt-gaagagttaaaatgttgataccagtggaaaactgtaagtctcataagtatatattgtcacaaccagaacaaccactacaaaaactctaccaatagatatattttaaaatattataaataaatcaatatagaaacctaacaaatgttcacgtaatcttcagaaagacaataaaataaaaacagaggaatgaaaactaaatatatagcaagaagca---aataataaaggggtaaatttaagtattaac--atcaaaaattacattaaatgttaaaggtataaat--agcaatcaaaagacagagactggaagagtgg-ataaaaaaa-acaaccaaattatagactgcttataataaacccacctcaaattcaatgacatagacagtttgaaagttatactatgtaaaaattatctttttaaaaaaatctaataaagtagacttcagcacaaagactattactagagacaaaacagaacactacacaatgataaaaggatcagtccaccaggaagatataaaatcccctcaatatgtgcacaccaaacaacagagttttaaaatccataaaacaaaattgataaagctgaaagaacagacaaatccacaattgtagctagacacttcaaaccatacatctctcagcaactgaaagaactactggacagaaaattagcaaagatataggagatctgaacaacaaaatcaaccagcaaaatctaattgatacatacgggagaaaagtgt-ggtttttt-atccactcttccaatcattgccaacaacatcag i ponAbe2.chr1 I 8 I 373 s rheMac3.chr1 33360403 870 + 229590362 tttgtcatatttgattattgaaacaaaaattataacaccatctgatacccaagaaaatatttgaaagtggggaaggtaaagaatctttggctaagaatctaaataaaaggaaggcaggtatccacacttaacttagaagaggtaaaatgttaataccagtagaaaactataagtatcataagtatatattgtaacaacc-----------------------------------------------tataaataaatcaatatagaatcccaacaaacgttcaagtaatcttcagaaagacaataaaataaaaacagaggaatgaaatctaaatatatagtaggaagca---aataataaaggggtaaatttaagtattaacatatcaaaaattacattcaatgttaatggtatagatacagcaatcaaaagacagagattggaagagtggaataaaaaaacaaaaccaaattatagactgcttataagaaacccacttcaaattcaatgataaagatagtttgaaagatatgctatgtaaaaattgtctttttttaaaaatctgataaagtagacttcagcacaaagactattactagagacaaaacagaacattacacaatgataaaaggaccagtccaccaggaagatataaaatcccctcaatatgtgcacaccaaacaacaaagttttaaaatccattaaacaaaattgataaagctgaaagaacagacaaatacacaattatagttgaacacttcaaaccattcatctctcagcaactgaaagaactactagacagaaaattagccaagatatagaagatctgaaaaacacaatcaaccagcaaaacctaattgacacatatggcagaaaagtgt-agtttttaaatccactcttccaacctctgccaacatcag--- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29871505 917 - 227556264 tttgtcatatttgattattgaaacaaaaattataacaccatctgatacccaagaaaatatttgaaagtggggaaggtaaagaatctttggctaagaatctaaataaaaggaaggcaggtatccacacttaacttagaagaggtaaaatgttaataccagtagaaaactataagtatcataagtatatattgtaacaaccagaacaaccactacaaaaactctgccaatagatatattttaaaatattataaataaatcaatatagaatcccaacaaatgttcaagtaatcttcagaaagacaataaaataaaaacagaggaatgaaatctaaatatatagtaggaagca---aataataaaggggtaaatttaagtattaacatatcaaaaattacattcaatgttaatggtatagatacagcaatcaaaagacagagattggaagagtggcataaaaaaacaaaaccaaattatagactgcttataagaaacccacttcaaattcaatgataaagatagtttgaaagatatgctatgtaaaaattgtcttttttaaaaaatctgataaagtagacttcagcacaaagactattactagagacaaaacagaacattacacaatgataaaaggaccagtccaccaggaagatataaaatcccctcaatatgtgcacaccaaacaacaaagttttaaaatccattaaacaaaattgataaagctgaaagaacagacaaatacacaattatagttgaacacttcaaaccattcatctctcagcaactgaaagaactactagacagaaaattagccaagatatagaagatctgaaaaacacaatcaaccagcaaaacctaattgacacatatggcagaaaagtgt-agtttttaaatccactcttccaatctctgccaacatcag--- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32634978 917 + 220367699 TTTGTCATATTTGattattgaaacaaaaattataacaccatCTGATAcccaagaaaatatttgaaagtggGGAAGGTAAAGAATCTTTGGCTAAGAATCTAAATAAAAGGAAGGCAGGTATCCACACTTAACTTAGAAGAGGTAAAATGTTAATACCAGTAGAAAACTATAAGTCTCATAAGTATATATTGTAACAACCAGAACAACCACTACAAAAACTCTGccaatagatatattttaaaatattataaataaatcaatatagaATCCCAACAAACATTCAAGTAATCTTcagaaagacaataaaataaaaacagaggaattaaatctaaatatataGTAGGAAGCA---AATAATAAAGGGGTAAATTTAAGTATTAACATATCAAAaattacattcaatgttaatggTATAGATACagcaatcaaaagacagagattggaagagtggaataaaaaaacaaaaccaaattataGACTGCTTATAAGAAACCCACTTCAAATTCAATGATAAAGATAGTTTGAAAGATATGCTAtgtaaaaattgtctttttaaaaaaatctgataaagTAGACTTCAGCACAAAGACTATTACTAGAGACAAAACAGAACAGTACACAATGATAAAAGGACCAGTCCACCAGGAAGATATAAAATCCCCTCAATATGTGCACACCAaacaacaaagttttaaaatccattaaacaaaattgataaagctgaaagaacacacaaatacacaattaTAGTTGAACACTTCAAACCATTCATCTCTCAGTAACTGAAAGAACtactagacagaaaattagccaagATATAGAAGATCTGAAAAACACAATCAACCAGCAAAACCTAAGTGACATATATGGCAGAAAAGTGT-AGTTTTTAAATCCACTCTTCCAATCTCTGCCAACATAAG--- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28151387 914 - 130588469 tttgtcatatttgattattgaaacaaaaattataacaccatctgatacccaagaaaatatttgaaagtggggaaggtaaagtatctttgactaagaatctaaataaaaggaaggcaggtatccacacttaactt-gaagaggtaaaatgttgataccagtagaaaactataaatctcataagtatatattgtaacaacaagaacaaccactacaaaaactctgccaatagatatattttaaaatattataaataaatcaatatagaatcccaacaaacattcaagtaatcttcagaaagacaatcaaataaaaacagaggaatgaaatctaaatatatagtaggaagca---aataataaaggggtaaatttaagtgttaacatatcaaaaattacattcaatgttaatggtatagatacagcaatcaaaagacagagattggaagagtagaataaaaaaacaaaaccaaattatagactgcttataagaaactcacttcaaattcaatgataaagatagtttgaaagatatgctatgtaaaaattgtcttttt-aaaaaatctgataaagtagacttcagcacaaagactattactagagacaaaacagcacattacacaatgataaaaggaccagtccaccaggaagatataaaatcccctcaatacgtgcacaccaaacaacaaagttttaaaatccattaaacaaaattgataaagctgaaagaacagacaaatacacaattatagttgaacacttcaaaccattcatctctcagcaactgaaagaacta-tagacagaaaattagccaagatatagaagatctgaaaaacacaatcaaccagcaaaacctaattgacacatatggcagaaaagtgt-agtttttaaatccactcttccaatctctgccaacatcag--- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64610688 884 + 155834243 tatgtcatgtttgattattgaaacaaaaagtataacaccatctgatacccaagacaatatttgaaagtggagaaggtaaagaatctttggt--agaatctaaaaccaaggaaggcaggtattcatacttcactt-gaagaggtaaaatgttgataacagtagaaacccataagcctcctaagtatgcagtgt---aaccaaaacaactcccacaaaaactctaccaatagatacatttcaaaatattataaataaattaatatggaatcctaacaaatgttcaagtaatcttaaaaaagtcaataaaataaaaacagatgaataaaaactaaatatatagtaggaagcaaataataataaagggataaattt----------------------------aatgttaatggtataaatacagcaatcaaaagacagagattggaagagtgg-attaaaaaacacaaacaaactataagctgcttacaagaaacccacttcaaattcaatgac----atcgtttgaaagatataccatgcaaacattatatttttttttaaatctgataaagtagacttcagcacaaagattattactaaagacaaaacagaacatttcacaatgataaaaggaccaatccgccaggaagatatgaaatccgctgagtatgtgcacactaagcaacagagttttaaaatccataaaacaaaattgataaagctgaaagaacagacaaattcacaattatggttagacacttaaaaccatacatct-tcagcaactaaaagaactactaaacagaaaattagcaaagatacagaagttctgaacaacgcaatcaaccagcaaaatctaattgacatttatgggagaaaagagtgggtttttttatccactctgtcaatctctgccaacaacatcag i calJac3.chr7 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I e canFam3.chr2 14992243 155 - 85426708 I a score=1526703.000000 s hg38.chr1_KI270760v1_alt 40787 684 + 109528 aatacatactctttcaagcaaccacagaccattcattaagataaattatatactgggctatgagacaaacatcaaaaaatataaatgaattgaaattatacaggatattctctgattataacagaaccaaagtagaaatcaataatggaaagacaactggaagacccctaaacatgtagaaattaaacaacacatctctttaaaaatccatgggtcaaaaagaaggtcttaa-gggaatgttt--aaaaaatacataaaactgaatggaaacaaaaatacatcgtatcaaaaatgtatacgat--gcagccaaaatagtgctgaaagaaaaagaattatagtattaaatgcctatgttagaaacaaggaaagatctcagatcaataatctaagttcttacctcaagacactagaaaaagaagagtaaaataaagccaatgcaagcaaaattaaggaaataatgaaaagagcaaaaaatcaatgaaattgaaaataggaaaacaataagtaaaatcaatgaaacaaaaaaaaactggctctttaaaaaaaatgataagattgataaaccttcagcaaataagaagatacaagaa----aaaaaaaacaggagacacaaatcactaatattggggatgaaatagggaatatcactatagaccatgcagctattaaaaggataataagagattgta s panTro4.chr1 30476626 682 + 228333871 aatacatactctttcaagcaaccacagaccattcattaagataaattatatactgggctatgagacaaacatcaaaaaatataaatgaattgaaattatacaggatattctctgattataatagaaccaaagtagaaatcaataatggaaagacaactgcaagacccctaaacatgtagaaattaaacaacacatctctttaaaaatccatgggtcaaaaagaaggtcttaaagggaatgttt--aaaaaatacataaaactgaatggaaacaaaaatatatcgtatcaaaaatgtataagat--gcagccaaaatagtgctgaaagaaaaaaaattatagtattaaatgcctatgttagaaacaaggaaagatctcagatcaataatctaagttcttacctcaagacactagaaaaagaagagtaaaataaagccaatgcaagcagaattaaggaaataatgaaaagagcaaaaaatcaatgaaattgaaaataggaaaacaataagtaaaatcaatgaaacaaaaaaag-ctggctctttaaaaaaa-tgataagattgataaaccttcagcaaataagaagatacaagaa----aaaaaaa-caggagacacaaatcactaatactggggatgaaatagggaatatcactagagaccatgcagctattaaaaggataataagagattgta i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30065015 681 - 229942017 aatacatactctttcaagcaaccatagaccattcattaagataaattatatactggactatgagacaaacatcaaaaagtataaatgaattgaaattatacaggatattctctgattataacagaaccaaagtagaaatcaataatggaaagacaactggaagatccctaaacatgtagaaattaaacaacacatctctttaaaaatccatgggtcaaaaagaaggtcttaaagggaatgttt--aaaaaatacatagaaccgaatggaaacaaaaatacatcatatcaaaaatgtataagat--gcagccaaaatagtgctgaaagaaaaaaaattatagtattaaatgtctatgttagaaacaagaaaaggtctcagatcaataatttaagttcttacct-aagacactagaaaaagaagagtaaaataaagccaatgcaagcagaattaaggaaataatgaaaagagcaaaaaatcaatgaaattaaaaataggaaaacaataagtaaaatcaatgaaacaaaaaaag-ctggctctttaaaaaag-tgataagattgataaaccttcagcaaataagaagatacaagaa----aaaaaaa-gagaagacacaaatcactaatattggggatgaaatagggaataccactatagaccatgcagctattaaaaggataataagagattgta i ponAbe2.chr1 I 373 C 0 s rheMac3.chr1 33361273 677 + 229590362 aatacatactctttcaagcaaccatagaccattcattaagataaattatatactgggctatgagacaaacatcaacaaatataaatgaattgaaattatacagggtattctctgattataacagaaccaaagtagaaatcaataacggaaagacaactggaaaatccctaaacatttagaaattaaacaatacacctctttaaaaatccatgggtcaaaaagaaggtcttaaagggaatttttt-aaaaaatac-taaaactgaatggaaacaaaaatatgtagtatcaaaaatgtataaggt--ccagccaaaacagtgctgaaagaaaaataa--atagtgttaaatgcctacattagaaacaaggaaagatctcaaatcaataatctaagttcttacctcaagacactaaaaaaagaagagtaaaataaagccaatgcaagcagaattaaggaaataatgaaaagagcaaaaaatcaatgaaattgaacataggaaaacaataaggaaaatcagtgaaacaaaaaag--ctggctctttaaaaaa--tgataagattgataaaccttcagcaag-aagaagatacaagaa----aaaaata-aagaggacacaaatcactaacattagggatgaaatagggaatatcactatagaccatgcagctataaaaagaataataagagattgta i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29872422 678 - 227556264 aatacatactctttcaagcaaccatagaccattcattaagataaattatatactgggctatgagacaaacatcaacaaatataaatgaattgaaattatacagggtattctctgattataacagaaccaaagtagaaatcaataatggaaagacaactggaagatcccttaacatttagaaattaaacaatacacctctttaaaaatccatgggtcaaaaagaaggtcttaaagggaattttttaaaaaaatac-taaaactgaatggaaacaaaaatatgtagtatcaaaaatgtataaggt--ccagccaaaacagtgctgaaagaaaaataa--atagtgttaaatgcctacattagaaacaaggaaagatctcaaatcaataatctaagttcttacctcaagacactaaaaaaagaagagtaaaataaagccaatgcaagcagaattaaggaaataatgaaaagagcaaaaaatcaatgaaattgaacataggaaaacaataaggaaaatcagtgaaacaaaaaag--ctggctctttaaaaaa--tgataagattgataaaccttcagcaag-aagaagatacaagaa----aaaaata-aagaggacacaaatcactaacattagggatgaaatagggaatatcactatagaccatgcagctataaaaagaataataagagattgta i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32635895 674 + 220367699 AATACATACTCTTTAAAGCAACCATAGACCATTCATTAAGATAAATTATATACTGGGCTATGAGACAAACATcaacaaatataaatgaattgAAATTATACAGGGTATTCTCTGATTATAACAGAAccaaagtagaaatcaataatggaAAGACAACTGGAAGATCCCTtaacatttagaaattaaacaatacacctCTTTAAAAATCCATGGGTCAAAAAGAAGGTCttaaagggaattttta-aaaaaatac-taaaactgaatggaaacaaaaatacatagtatcaaaaatGTATAAGGT--CCAGCCAaaacagtgctgaaagaaaaataa--atagtattaaatgcctacattagaAACaaggaaagatctcaaatcaataatctaagttcTTACCTCAAGACactaaaaaaagaagagtaaaataaaaccaatgcaagcagaattaaggaaataatgaaaagagcaaaaaatcaatgaaattgaacataggaaaacaataaggaaaatcagtgaaacaaaaaag--CTGGCTCTTTAAAAAC--TGATAAGATTGATAAACCTTCAGCAAG-AAgaagatacaagaa----aaaaata-aagagggcaCAAATCACTAACATTAGGGATGAAATAGGGAATATCACTATAGaccatgcagctataaaaag---aataagagaTTGTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28152301 678 - 130588469 actacatactctttcaagcaaccatagaccattcattaagataaattatatactgggctatgagacaaacatcaacaaatataaatgaattggaattatacagggtattctctgattataacagaaccaaagtagaaatcaataatggaaagacaactggaagatcccttaacatttagaaattaaacaatacacctctttaaaaatccatgggtcaaaaagaaggtcttaaagggaattttttaaaaaaatac-taaaactgaatggaaacaaaaatacgtagtatcaaaaatgtataaggt--ccagccaaaacagtgctgaaagaaaaataa--atagtattaaatgcctacattagaaacaaggaaagatctcaaatcaataatctaagttcttacctcaagacactaaaaaaagaagagtaaaataaagccaatgcaagcagaattaaggtaataatgaaaagagcaaaaaatcaatgaaattgaacataggaaaacaataaggaaaatcagtgaaacaaaaaag--ctggctctttaaaaaa--tgataagattgataaaccttcaacaag-aagaagatacaagaa----aaaaata-aagaggacacaaatcactaacattagggatgaaatagggaatatcactatagaccatgcagctacaaaaagaataataagagattgta i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64611572 675 + 155834243 aatacatactctttcaagcgaccatagaccattcattaagataaattttatactgggatatgagacaaacatcaacaaatataaatgaattgaaatcatacagggtattctctgattgtaacagaaccaaagtagaaatcaataatggaaagacaactggaagatccctaaatgcgtggaaattaaacaacacatccctttaaaaatctgtgggtcaaagagaaggtcttaaaggaaatttttt---taaatacataaaaatgaatgcaaacaaaaatacatcatatcgaagttgtataagataaacagccaaaacagcactgaaagaacaaatt--atagtatcaaatgcctatgtgagaagcaagaaaagatctcaaatcaacaagctaagttcttacctcaagacactagaaaaagaagagtaaaataaagccaatacaagcagacttaagaaaatgatgaaaagagcaaaaaatcaatgaaactgaaaataggaaaa----aagtaaaatcaatgaaacaaaaag---ctgactctttaaaaaaa-tgataaggttgataaacctttagcaaataaggagatacaagaaaaagaaaaata-gagaagacacaaatcactaatattggggatgaaataggaaatatcactgtaggtcatgcagctgttaaaaggatagtaagagat---- i calJac3.chr7 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I e canFam3.chr2 14992243 155 - 85426708 I a score=3660476.000000 s hg38.chr1_KI270760v1_alt 41471 1448 + 109528 tgaacaaccttatgctcataaaatagaagaattggaccaaattctcaaaaaccataaactactaaaggtaagccaagataaaatgggtagtctgaataaccctatagccatcaaacaaattaaattcataatgtttaaaatttctgaaaaagaaatttttcagcctaagtggtttcactggagacttctaccaaatttttgaagaggaataaacaccaatattatacaatttcttcaggaaaataaataacatctatacaaaa-ccacaggtgacaaattatttagtggtcaaatgctgtatgattagcaacaaaaaatacaaaagattaggaaaaatgcaaggatatgcctgctctcatttatcttatttgacattgtactagaatttatagccactgcattaaggtaagaaaaacagat-----aaaaggtatatagtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttatctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagctagtaagtgtgttcagtaagttctcaggttgcgaagttaacacacaaaaattaagcgtatttctccaagctaacaaaatatgcagaaatcaaattttaaaacacaataccatttacagtcacactaaagaaaataatatacttagctatacacttaacgaaatacatatggaatctatatactgaaaaatataaaatatttacaagagaaattttaaa------------------------agaccgtgttcatggttttgagtattcaac-ttagtaaagatgtcagttcttaccaaattgatatactggtttaatgcaatttgtatcaaaatcccagcagaccttttagtaaacataggcgaa-ttattcatcaacttacatggaaaaatacatgttctagaaagttaaatcaattttgaca---aagaatatggaaggaatcactctagctggcattaaggcttactattcaacgacattaatcaagacaccgtggtactaa----aagagggatacatacatccat------agaaaacgaagaaatagacccacacaaacatgttcaattgatttttgacaaaggtacaaaggccattctatgggggaagttaatcttattcaccaaatggtgctagagcaattac-acatccataagcaaaagagg-----aatctcagcaca-ctttctatata-----actaaaaatgaataacatacataaatgataaatgtaaagcacaaaaccataaaactttttagaagaaaatgtagg--aaaaatcttcatgaccta-----gggcaaagagtcctt---------------tttg--------tttgtttttgtttctgagatggagtctcactctctctcccaggctggagtgcagtggttcgatctcagctcacagaaacctttgcctcccaggttcaagtggttcccctgcctcagcctccagagtagctggaattacaggcacctgccacca s panTro4.chr1 30477308 1448 + 228333871 tgaacaaccttatgctcataaaatagaagaattggaccaaattctcaaaaaccataaactactaaaggtaagccaagataaaatgggtaatctgaataaccctatagccatcaaacaaattaaattcataatgtttaaaatttctgaaaaagaaatttttcagcctaagtggtttcactggagaattctaccaaatttttgaagaggaataaacaccaatattatacaatttcttcaggaaaataaataacatctatacaaaa-ccacaggtgacaaattatttagtggtcaaatgctgtatgattagcaacaaaaaatacaaaagattaggaaaaatacaaggatatgcctgctctcatttatcttatttgacattgtactagaatttatagccactgcattaaggtaagaaaaacagat-----aaaaggtatgtagtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttatctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagccagtaaatgtgttcagtaagttctcagtttgcgaagttaacacacaaaaattaagcgtatttctccaagctaacaaaatatgcagaaatcaaattttaaaacacaataccatttacagtcacactaaagaaaataatatacttagctatacacttaacgaaatacatatggaatctatatactgaaaaatataaaatatttacaagagaaattttaaa------------------------agaccgtgttcatggttttgagtattcaac-ttagtaaagatgtcagttcttaccaaattgatatactggtttaatgcaatttttatcaaaatcccagcagactttttagtaaacataggcgaa-ttattcatcaacttacatggaaaaatacatgttctagaaagttaaatcaattttgaca---aagaatatggaaggaatcactctagctggcattaaggcttactattcaactacattaatcaagacaccgtggtactaa----aagagggatacatacatccat------agaaaacgaagaaatagacccacacaaacatgttcaattgatttttgacaaaggtacaaaggccattctatgggggaagttaatcttattcaccaaatggtgctagagcaattac-acatccataagcaaaagagg-----aatctcagcaca-ctttctatata-----actaaaaatgaataacatacataaatgataaatgtaaagcacaaaaccataaaactttttagaagaaaatatagg--aaaaatcttcatgaccta-----gtgcaaagagtcctt---------------tttg--------tttgtttttgtttctgagatggagtctcactctctctcccaggctggagtgcagtggttcgagctcagctcacagaaacctttgcctcccaggttcaagtgattcccctgcctcagcctccagagtagctggaattacaggcacctgccacca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30065696 1448 - 229942017 tgaacaaccttatgctcataaaatagaagaactggaccaaattctcaaaaaccataaactactgaaggtaagccaagataaaatggataatctgaataaccctatagccatcaaacaaattaggttcataatgtttaaaatttctgaaaaagaaatctttcagcctaagtggtttcactggagaattctaccaaatttttgaagaggaataaacaccaatattatacaatttcttcaggaaaataaataacatctatacaaaa-ccacaggtgacaaattatttagtggtaaaatactgtatgattagcaagaaaaaatacaaaagattaggaaaaatgcaaggatatgcctgctcccatttctcttatttgacattgtactagaatttatagccactgcaataaagtaagaaaaagagat-----aaaaggtatatagtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttatctacatag-aaaatcccaaagaatcta-gaaaatatctcccagagctagtaaatgtgttcagtaagttctcaggttgcaaagttaacacacaaaaattaagcatatttctccaagctaacaaaatatgcagaaatcaaattttaaaacacaataccatttacagtcacactaaagaaaataatatacttagctacagacttaacaaaatacatgtggaatctatatactgaaaaatataaaatacttacaagataaattttaaa------------------------agactgtgttcatagttttgagaattcaac-ttagtaaagatgtcagttcttaccaaattgatatactggtttaatgcaatttgtatcaaaatccaagcagactttttagtaaacataggcaaa-ttattcatcaacttacatggaaaaatacatgttctagaaagttaaatcaactttgaca---aagaatatggaaggagtcactctagctggcattaaggcttactattcaactacattaatcaagacaccatggtactaa----aagagggatacatatatccat------agaaaatgaagaaatagacccacacaaacatgttcaattgatttttgacaaaggtacaaaagctattcgatgggggaagttaatcttattcactaaatggtgctagagcaattac-acatccataagcaaaagagg-----aatctcaacaca-ctttctatata-----actaaaaatgaataatatacataaatgataaatgtaaagcacaaaaccataaaacttttcagaagaaaatatagg--aaaaatcttcatgaccta-----gggcaaagagtcctt---------------tttg--------tttgtttttgtttctgagatggaatctcactctctctcccaggctggagtgcagtggttcgatctcggctcacagaaacctttgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctggaattacaggcacctaccacca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33361950 1464 + 229590362 tgagcaaccttatgctcataaaatagaagaattggaccaaatcctcaaaaaccataaactattaaaggtaagtcaagataaaatggctaatctgaataatcctatagccatcaaacaaattaaattcgtaatgtttaaagtttctgaaaaagaaatctttcagtctaagtggtttcactggagaattctaccaaatttttgaagaggaataaacaccaatattacacaatttcttcatgaagataaataacatctatacaaaa-ccacaggtgacaaattatttagcggtaaaacactgtaggattaggaacaaaaaatacaaaagattaggaaaaatgcaaggatatgcctgctctcatttctcttatttgacattgtactagaatttatagccactgcaataaggtaagaaaaagagat-----aaaaggtatatagtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttgtctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagctagtaaatgtgttcagtaagttctcaggttacaaaattaacacacaaaaattaagcatgtttctccaagctaacaaaatatgcagaaatcaatttttagaacacaataccatttacagtcacactaaagataataatatacttagatatacacttaacaaaatacatatggaatctatgtactaaaaaatataaaatacttacaagataaattttgaa------------------------agactgtgttcatggatttgagaatccaac-ttagtaaagatatcagttcttaccaaattgatatacttgtttaatgcaatttctatcaaaatcccagcagattttttagtagacataggcaaa-ttattcatcaacttatatggaaaaatacaggatctagaaagttaaatcaattttgaca---aagaatataggaggaatcactctagctggcattaaggcttcctattcaactacattaatcaagacactgtagtactaa----aagagggatacatacatccat------ggaaaaccaagaaacaggcccacacaaacatgttcaa-tgatttttgacaaaggtacaaaagctgttggatgggggaagcttatcttattcaccaaatggtgctagagtaatcacaaaatctataagcaaaagagg-----aatctcaacaca-ctttctacata-----actaaaaatgaataatatacataaatgataaatataaagcacaaaactataaaactttttggaagaaaatgtagg---aaaatcttcatgaccta-----gggcaaagagtccttttttgttca------tttgtttttgtttttgtttttgtttttgagatgggatctcactctgtcacccaggctgtagtgcagtggttcgatctccactcactgcaacgtttgcctcccaggttcaagtgattttcctgcttcagcctccaaaatagctgggattataggcgcctgccacca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29873100 1464 - 227556264 tgagcaaccttatgctcataaaatagaagaattggaccaaatcctcaaaaaccataaactattaaaggtaagtcaagataaaatggctaatctgaataatcctatagccatcaaacaaattaaattcgtaatgtttaaagtttctgaaaaagaaatctttcagtctaagtggtttcactggagaattctaccaaatttttgaagaggaataaacaccaatattacacaatttcttcatgaagataaataacatctatacaaaa-ccacaggtgacaaattatttagcggtaaaacactgtaggattaggaacaaaaaatacaaaagattaggaaaaatgcaaggatatgcctgctctcatttctcttatttgacattgtactagaatttatagccactgcaataaggtaagaaaaagaaat-----aaaaggtatatagtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttgtctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagctagtaaatgtgttcagtaagttctcaggttacaaaattaacacacaaaaattaagcatgtttctccaagctaacaaaatatgcagaaatcaatttttagaacacaataccatttacagtcacactaaagataataatatacttagatatacacttaacaaaatacatatggaatctatgtactaaaaaatataaaatacttacaagataaattttgaa------------------------agactgtgttcatggatttgagaatccaac-ttagtaaagatatcagttcttaccaaattgatatacttgtttaatgcaatttctatcaaaatcccagcagattttttagtagacataggcaaa-ttattcatcaacttatatggaaaaatacaggatctagaaagttaaatcagttttgaca---aagaatataggaggaatcactctagctggcattaaggcttcctattcaactacattaatcaagacactgtagtactaa----aagagggatacatacatccat------ggaaaaccaagaaacaggcccacacaaacatgttcaa-tgatttttgacaaaggtacaaaagctgttggatgggggaagcttatcttattcaccaaatggtgctagagtaatcacaaaatctataagcaaaagagg-----aatctcaacaca-ctttctacata-----actaaaaatgaataatatacataaatgataaatataaagcacaaaactataaaactttttggaagaaaatgtagg---aaaatcttcatgaccta-----gggcaaagagtccttttttgttca------tttgtttttgtttttgtttttgtttttgagatgggatctcactctgtcacccaggctgtagtgcagtggttcgatctccactcactgcaacgtttgcctcccaggttcaagtgattctcctgcttcagcctccaaaatagctgggattataggcgcctgccacca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32636569 1464 + 220367699 TGAGCAACCTTATGCTCATAAAATAGAAGAATTGGACCAAATCCTCAAAAACCATAAACTATTAAAGGTAAGTCAAGATAAAATGGCTAATCTGAATAATCCTATAGCCATCAAACAAATTAAATTCGTAATGTTTAaagtttctgaaaaagaaatctttcaGTCTAAgtggtttcactggagaattctaccaaattttTGAAGAGGAATAAACACCAATATTACACAATTTCTTCATGAAGATAAATAACATCTATACAAAA-CCACAGGTGACAAATTATTTAGCGGTAAAACACTGTAGGATTaggaacaaaaaatacaaaagattaggaAAAATGCAAGGATA------CTCTCATTTCTCTTATTTGACATTGTACTAGAATTTATAGCCACTGCAGTAAggtaagaaaaagagat-----aaaaggtaTATAGtttgtaaaagaagaaataaaactatctctatttgcagatgacacagttgtctacatag-aaaatctcaaagaatctA-GAAAATATCTCCCAGAGCTAGTAAATGTGTTCAGTAAGTTCTCAGGTTACAAAgttaacacacaaaaattaagcaTGTTTCTCTAAGCTAACAAAATATGCAGAAATCAATTTTTagaacacaataccatttacagtCACACTAAAGataataatatacttagatatacacttaacaaaatatatatggaatctatatactaaaaaatataaaatgcttacaAGATAAATTTTGAA------------------------AGACTGTGTTCATGGATTTGAGAATCCAAC-TTAGTAAAGATATCAGTTCTTACCAAATTGATATACTTGtttaatgcaatttctatcaaaatcccagcagattttttagtagacataggcaAA-TTATTCATCAACTTATATGGAAAAATACAGGATCTAGAAAGTTAAATCAATTTTGACA---AAGAATATAGGAGGAATCACTCTAGCTGGCATTAAGGCTTCCTATTCAACTACATTAATCAAGACACTGTAGTACTAA----AAGAGGGATACATACATCCAT------GGAAAACCAAGAAACAGGCCCACACAAACATGTtcaa-tgatttttgacaaaggtacaaaagCTGTTGGATGGGGGAAGCTTATCTTATTCACCAAATGGTGCTAGAGTAATCACAAAATCCATAAGCAAAAGAGG-----AATCTCAACACA-CTTTCTACGta-----actaaaaatgaataatatacataaatgataaatataaagcacaaaactataaaactttttagaagaaaatgtagg---aaaatcttcatgaccta-----GGGCAAAGAgttcttttttgttcatttgtttttgtttttgtttttgtttttgtttttgagatgggatctcactctgtcacccaggctgtagtgcagtggtttgatctccactcactgcaacgtttgcctcccaggttcaagtgattctcctgcctcagcctccaaagtagctgggattataggtgcctgccacta i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28152979 1464 - 130588469 tgagcaaccatatgctcataaaatagaagaattggaccaaatcctcaaaaaccataaactattaaaggtaagtcaagataaaatggctaatctgaataatcctatagccatcaaacaaattaaattcgtaatgtttaaagtttctgaaaaagaaatctttcagtctaagtggtttcactggagaattctaccaaatttttgaagaggaataaacaccaatattacacaatttcttcaggaagataaataacatctatacaaaa-ccacaggtgacaaattatttagcggtaaaacactgtaggattaggaacaaaaaatacaaaagattaggaaaaatgcaaggatatgcctgctttcatttctcttatttgacattgtactagaatttatagccactgcaataaggtaagaaaaagagat-----aaaaggtatatagtttgtaaaagaagaaataaaactatctctatttgcagatgccacagttgtctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagctagtaaatgtgttcagtaagttctcaggttacaaagttaacacacaaaaattaagcatgtttctccaagctaacaaaatatgcagaaatcaatttttagaacacaataccatttacagtcacactaaagaaaataatatacttagatatacacttaacaaaatatatatggaatctatatactaaaaaatataaaatacttacaagataaattttgaa------------------------agactgtgttcatggatttgagaatccaac-ttagtaaagatatcagttgttaccaaattgatatacttgtttaatgcaatttctatcaaaatcccagcagattttttagtagacataggcaaa-ttattcatcaaatcatatggaaaaatacaggatctagaaagttaaatcaattttgaca---aagaatataggaggaatcactctagccggcattaaggcttcttattcaactacattaatcaagacactgtggtactaa----aagagggatacatacatccat------ggaaaaccaagaaacaggcccacacaaacatgttcaa-tgatttttgacaaaggtacaaaagctgttggatgggagaagcttatcttattcaccaaattgtgctagagtaatcacaaaatccataagcaaaagagg-----aatctcaacaca-ctttctacata-----actaaaaatgaataatatacataaatgataaatataaagctcaaaactataaaactttttagaagaaaatgtagg---aaaatcttcatgaccta-----gggcaaagagtccttttttgttca------tttgtttttgtttttgtttttgtttttgagatgggatctcactctgtcacccaggctgtaatgcagtggttcgttctccactcactgcaacatttgcctcccaggttcaagtgattctcctgcctcagcctccaaagtagctgggattataggcgcctgccacca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64612247 1437 + 155834243 tgaacaaccttatgctcataaaatagaagaattggaccaaatcctcaaaagctgtaaactactaaaggcaagccaagataaaatggatcatctcaataacccaatagccaccaaacacattagatt-atgatgtttaaaatttcggaaaaaggagtctttcagcctgagtagtttcactggagaattctaccatatttttacagaagaat-aacatcaatattatataatttcttcaggaaaataaacaacatctacacaaaa-ccacagctgacaaattatttagtggtaaaacactgtgtgattaggaacaaaaaatacaaaagattaggaaaaaggcaaggatatgcttgatctcatttctcttatttgacattgtactggaatttatagcagctgcaataaggtaagaaaaagaaat-----aaaaggtatatattttgtaaatgaagaaataaaactatctctatttatagatgacataattgtctacatag-aaaatctcaaagaatcta-gaaaatatctcccagagctagtaaatgtattcaataagttctcaggttacaaagttagcacacaaaaatccgtcatatttctacaagctaacaaaacacacagaaatcaaatttaaaaacacaataccatttacagtcacactaaaga-aataatacacttagctatacacttaacaaaatacatatggaatctatgtactgaaaaatac-aaatacttacaagagaaattttaaa------------------------agacaatgttcatggatttgagtattcaac-ttagtaaagaaatcagttctcaccaaa-tgatatgctgatttaatgcaatttctatcaaaatcccagcagatttttt-gtatgcatagccaaatttatacatcaacttaaatggaaaaatacaggctctagaaagttaaatcagtcttgacaaggaagaatatgggaggaatcactctagctagcattaaggtttactattcaggtacattaatcaagacaccatggtagtaa----cagagggatacatacattcat------ggaaaaccaagaaataggcccacacaaatatgttcaattgatttttgacaaagatataaaagctattcaatggaggaagtttattttattctccaaatagtgctagaacaattac-acacccataaacaaaagaga-----aatctcaacgta-ctttctatata-----actaaaaatgaataatatacataaatg-------taaagcacaaaactataaaactttt-agaagaaaatatagg--aaaaatcttcatgaccta-----aggcaaaaagttgtt---------------gttg---------ttgttattttttctgagatgaagtctcactcttttgcccaggctggagtgcagtggtacaatcgcagctcactgcaacttttgcctcccaggttcaggtgatcctcctgcctcagcctcccaagtagcttggattacaggcacccaccacca i calJac3.chr7 C 0 C 0 s canFam3.chr2 14992398 1321 - 85426708 TGGACAGCCTCACAGTc--aaattcgaggaattgaaccaattcccccaaagccccaaactactagagctaacccaggatgaaattaatggtctgaataactccatagccatccaacaaattacatttataatgttaaaaattcctgaaaaagaaaccttcagccccaagtggtttcactggagagctctatcaattctttcaa---ggattaataccagcatgacacaatgtcttcaagaaaacaaagaacatctacacaggacccatagttaac---ttacttagtggtggcacactgaatgctt----------tctgcccaagattaggaacaaggcaaggat--gcttgctctca-cccccttattcaacatggtactggaatttaag------gcaataagtccagaaaaagaaagaaaaaaaaaagcacacagtttggaatagaagaaataaga------ccatttgcagatgacacagttgtctatgtagaaaaattccaggggatctacaaaaacacttcccagacc---taagaggattcagtaaggtctcaagatacaaagtcaatgcccccaaacctgtcatgtttccataagctaacagaacgtgtagaaaccagaattaaaagcatgattccatttacaatggtagccaagaaaatgaaatacttagctatacacttaacaagacaggtgcagaacctgcatgctgaaaattggaaattactgatacaagaaattttaaaaagacccacgttacatggagaaacaaactacgttcatagatttgaacactcggctttagtaaagctgtcagttctcaccaaactgg-agataggcttcacaagattcttatcaaaatcccaccaagagcttttgtaaacatggacaagcttcttctgatacttgcatggaaaagcaccgaccctagaacagcgaatacatcttgacaaagaagaaaatgggacgaatcactctatgtgacatta---catactatgcggctgcattaatcaaggtaccgaggtattggtggcaggacagacgcatagatccatgggacaggagaacccagaaatagacccacacagatacgctcaattgattcttgacaaaggtgcaaaagcaattcagtggagaaagaatcgtctatttaacaagcagtgctggagacattac-ccaccaagaggcaaaaaaaaaaattaacctcaaaacacctctatacatagaatggatcaaaatggatcatatacctaaatga-------aacccataaagataggaggctctc-agaagaaaatagaagagaaaaatgttcaggagctaaggctaggcaatgagttc-----------------ttag------------------------------------------------------------------------------------------------------------------------------------------------------acttgacacca i canFam3.chr2 I 155 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I a score=360800.000000 s hg38.chr1_KI270760v1_alt 42919 160 + 109528 cacctggctaatttttgtatatttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgagccactcgcctcagcctcccaaagtgctgggattacaggcatgagccacagcacccagctagaattcttaaacacc s panTro4.chr1 30478756 160 + 228333871 cacctggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccactcgcctcagcctcccaaagtgctgggattacaggcatgagccacagcacccagctagaattcttaaacacc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30067144 160 - 229942017 cacctggctaatttttgtatttttagtagagacggagtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccacagcacccagctaaaattcttaaacatc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33363414 159 + 229590362 tgcctggataatttttgtatttttagtagagacgg-gtttcactatgttggccaggctggtctcaaactcctgacctcaagtgatttacctgctttggcctccgaaagtgctgggattacaggcgtgagccacagcatccggccagagttgttaaacacc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29874564 159 - 227556264 tgcctggataatttttgtatttttagtagagacgg-gtttcactatgttggccaggctggtctcaaactcctgacctcaagtgatttacctgctttggcctccgaaagtgctgggattacaggcgtgagccacagcatccggccagagttgttaaacacc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32638033 159 + 220367699 tgcctggataatttttgtatttttagtagagacgg-gtttcactatgttggccaggctggtctcaaactcctgacctcaagtgatttacctgctttggcctccgaaagtgctgggattacaggcgtgagccacagcatccgGCCAGAGTTGTTAAACACC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28154443 159 - 130588469 tgcctggataatttttgtatttttaggagagacgg-gtttcaccatgttggccaggctggtctcaaacccctgacctcaagtgatttacctgctttggcctccgaaagtgctgggattacaggcgtgagccacagcatccggccagagttgttaaacacc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64613684 160 + 155834243 cacctggctaatttttgcatttttagtagagacaaggtttcgccatgttggccaggctgctctcaaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggattacaggcatgaaccaccactcccagccagagttcttaaacacc i calJac3.chr7 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I e canFam3.chr2 14993719 0 - 85426708 C a score=1018481.000000 s hg38.chr1_KI270760v1_alt 43079 396 + 109528 aaaagtgtgacccatagca--gaaaataaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCATGTAAAAACAGACTTTGTCATGAGGAAGCAGACTTGAGAGACACAAAGTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACTTGATCCAAGCAAGAAGGAAGA-GGAAGAATGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCAGTTGCTTAACGGAGAAACATTGGAGATGTATGTAGAAACttcattatc----tcattcattaattaattcattcactcatctgttcatgcatcatgtatttattggata-cctctatatgcctcatact s panTro4.chr1 30478916 396 + 228333871 aaaagtgtgacccatagca--gaaaataaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCATGTAAAAACAGACTTTGTCATGAGGAAGCAGACTTGAGAGACACAAAGTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACTTGATCCAAGCAAGAAGGAAGA-GGAAGAATGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCAGTTGCTTAACGGAGAAACATTGGAGATGTATGTAGAAACTTCATTATC----TCATTCATTAATTAATTCATTCACTCatctgttcatgcatcatgtatttattggata-cctttatatgcctcatact i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30067304 396 - 229942017 aaaagtgtgacccataaca--gaaaataaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCATGTAAAAACAGACTTTGTCATAAGGAAGCAGACTTGAGAGACACAAATTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTAATGGAACTTGATCCAAGCAAGAAGGAAGA-GGAAGAATGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCAGTTGCTTAATGGAGAAACATTGGAGATGTATGTAGAAACTTCATTATC----TCATTCATTAATTAATTCATTCACTCatctgttcatgcatcatgtatttattggata-cctctatatgcctcatact i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33363573 400 + 229590362 aaaagtgtgatccatagca--gaaaacaaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCATGTAAAAACAGACTTTGCTGTGAGGAAGCAGACTCGAGATACACAAATTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACCTGATCCAAGCAAGAAGGAAGA-GGAAGACTGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCCATTGCTTAATGGAGAAACATTGGAGATGTGTGTAGAAACttcattatctcattcattcattcattcattcattcattcatctgttcatgcatCATGtatttattggata-cctctatgtgcctcatact i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29874723 392 - 227556264 aaaagtgtgatccatagca--gaaaacaaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCATGTAAAAACAGACTTTGCTGTGAGGAAGCAGACTCGAGATGCACAAATTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACCTGATCCAAGCAAGAAGGAAGA-GGAAGACTGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCCATTGCTTAATGGAGAAACATTGGAGATGTGTGTAGAAACttcattatc--------tcattcattcattcattcattcatctGttcatgcatcatgtatttattggata-cctctatgtgcctcatact i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32638192 391 + 220367699 AAAAGTGTGATCCATAGCA--GAAAACAAATTGATAAAGTAGA---CATTGGAATTTAAAA--CT--GCTTTTGT-GAAAGCCTGTGTGAGGAGGATTCCTCTGACCACGTAAAAACAGACTTTGTCGTGAAGAAGCAGACTCGAGATACACAAATTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACCAGATCCAggcaagaaggaaga-ggaagactgAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCCATTGCTTAATAGAGAAACATTGGAGA--TGTGTAGAAacttcattatc----tcatttatttattcattcattcattcatctgttcatgcatcatgtatttattGGATA-CCTCTATGTGCCTCATACT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28154602 392 - 130588469 aaaagtgtgatccatagca--gaaaacaaattgataaagtagacctcattggaatttaaaa--ct--gcttttgt-gaaagcctatgtgaggaggatTCCTCTGACCACGTAAAAACAGACTTTGTCGTGAGGAAGCAGACTCGAGATACACAAATTGTCTCCCAAGCAGGGACAGCAGGACTCTCCAGGAAAGGATTCATGGAACCTGATCCAAGCAAGAAGGAAGA-GGAAGACTGAAACCTTCTCCCAAGCCACACCTGGACAAGGG-----------------------------------TTTTCTTTCCATTGCTTAATGGAGAAACACTGGAGATGTGTGTAGAAACttcattatc--------tcattcattcattcattcattcatctGttcatgcatcatgtatttattggata-cctctatgtgcctcatact i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64613844 383 + 155834243 aaaagtgtgatccacagca--gaaaataaattgataaagtagacctcattggagcttaaaatttt--gcttttgt-gaaagcctatgtgaggaggatTCCTTTGACCGTGTAAAAACGGCCTTTGTCATGAAAAAGCAGACTTGAGAGACACAAATCATCTCCCAAGCAGGGGCAGTAGGACTCTCCAGGAAAGGACACACGGAACTTGATCCAAGCAAGAAGGAA----GAAGACTGAAACCTTCTCCCAAGCTACGCCTGGACAAGGG-----------------------------------TTTCCTTTCAGTTGCTTAACAGAGAAACATTGGAGATGTGTGTAGAAACTTCATCATC----------------TCATTCATTCATTCatctgttcatgcatcatgcatttattggata-cctctatgtaccttatatg i calJac3.chr7 C 0 C 0 s canFam3.chr2 14993719 390 - 85426708 aaaagtatgatccataaaaatatatatatattgataaatgggacctccctggaaataaaaa--cttggcttttgtaggaagcccctgggagaagg-ctgCTCTGACAGTACAAATAGGGCCTCTGTCAT-AGGAAGCAAACTC-AGAGACACAGAGTGT-----------GAGCTGC--GACTCCCCAGGAAAGGGTTCATGGGACTTGAATCGGGCAAGATAGAAGACGGAAAAA--------TTTTTCAAGCCACACCTGGATAAAGGAGTTTTGGGTGCGGGTTGTCttttttttttttttttttttttCTGGTTACTGAATGGAGCAACATTGGAAATGTATGTAGACAC----------------------------TTCGTTCATTCATCTCTTCCTCCATCGTGTATTTATTGGAAAGCTTCTATGTGCTTCCTGCT i canFam3.chr2 C 0 C 0 e mm10.chr4 25408079 8631 - 156508116 I e nomLeu3.chr24 483413 1123 - 28733288 I a score=425317.000000 s hg38.chr1_KI270760v1_alt 43475 148 + 109528 ttcctatgtgctgggaccagaaatggacaagatagacaaaGCCTGTTTGTTCCATATGGGATATGTGGTCCCTTTATtccccattgcagtggaagagaagaatggagttgtcacatctactcgtaactgcctcaggccagaaataatt s panTro4.chr1 30479312 148 + 228333871 ttcctatgtgctgggaccagaaatggacaagatagacaaaGCCTGTTTGTTCCATATGGGATATGTGGTCCCTTTATtccccattgcagtggaagagaagaatggagttgtcacatctactcgtaactgcctcaggccagaaataatt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30067700 148 - 229942017 ttcctatgtgctgggaccagaaatggacaagatagacaaaGCCTGTTTGTTCCACATGGGATATGTGGTCCCTTTGTtccccattgcagtggaagagaagaatggagttgtcacatctactcgtaactgcctcaggccagaaataatt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33363973 148 + 229590362 ttcctatgtgctgagaccagaaatggacaagatagacaaaGCCTGTTTGTTCCATATGGGATATGTGGTCCCTCTGTTCTCCACTgcagtggaagagaagaatggagttgtcacatctactcataactgcctcaggccagaaataatt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29875115 148 - 227556264 ttcctatgtgctgagaccagaaatggacaagatagacaaaGCCTGTTTGTTCCATATGGGATATGTGGTCCCTCTGTTCTCCACTgcagtggaagagaagaatggagttgtcacatctactcataactgcctcaggccagaaataatt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32638583 148 + 220367699 TTCCTATGTGCTGAGACCAGAAATGGACAAGATAGACAAAGCCTGTTTGTTCCATATGGGATATGTGGTCCCTCTGTTCTCCACTGCAGTGGAAGAGAAGAATGGAGTTGTCACATCTACTCGTAACTGCCTCAGGCCAGAAATAATT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28154994 148 - 130588469 ttcctatgtgctgggaccagaaatggacaagatagacaaaGCCTGTTTGTTCCATATGGGATATGTGGTCCCTCTGTtctccattgcagtggaagagaagaatggagttgtcacatctactcgtaactgcctcaggccagaaataatt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64614227 141 + 155834243 ttcctatgtgctgggaccagaaatggacaaaatggacaaaGCCTGTTTGTTccatatgggacatgtggtccctgtggtccccactgcagtggaagagaagaatgg-------acatcgactcctaactgccttaggccagaaatgatt i calJac3.chr7 C 0 C 0 s mm10.chr4 25416710 122 - 156508116 TTCCTCTGTGCTGGACTGAGAAACAGTGAAAGCAGAAGAGA--TGTCTCTTCCTCACCCAGGATGCGGTCCCAGAGGTCAACACTGCAGAGGAAGG------------TGTCACG------------CGCATCTTACTGGAAATTATT i mm10.chr4 I 8631 C 0 s canFam3.chr2 14994109 148 - 85426708 TTCCTGTGTCCTGGAGCTGAAGATGGACAAGGTGGACGAGGTCTGTCTCTCCCAACCGGGACATGGGGTCCCCGTGGGAAGCCCTGTAGAGCAAGTGAGGCAAGGACGCATCACAGCCACGCTTAAGTGCCTCGAGCCAGAGATGACT i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 483413 1123 - 28733288 I a score=1149133.000000 s hg38.chr1_KI270760v1_alt 43623 406 + 109528 catgttacttctgctcacagtccattgaccattactagtcacatgaggacaacttatctgcaaagaatgctgggaattatag--------GG--ACATTTGG------TGTCTACTGTTTTGGGGCACAAGTTCCATTGAATATCATTCAAA----------------CTG-AATCGCCCTTATGGGAAATTGTCTAATTGTCTACAA-TTTTCCTCTCACAGA-----TTGACTTCATCTTTCTCAA----AAAATTCTTCAAACAAGTT-CATAAATCTATGAGTCAAGAAGCCACTGCAGGTAACACTACATACAGA---TATATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCAGC------AAGAGTCAAATCAGAAAAACAACTCCTTGGAGATTTTTGCCTCA-CATGGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA s panTro4.chr1 30479460 406 + 228333871 catgttacttctgctcacagtccattgaccattactagtcacatgaggacaacttatctgcaaagaatgctgggaattatag--------GG--ATATTTGG------TGTCTACTGTTTTGGGGCACAAGTTCCATTGAATATCATTCAAA----------------CTG-AATCGGCCTTATGGGAAATTGTCTAATTGTCTACAA-TTTTCTTCTCACAGA-----TTGACTTCATCTTTCTCAA----AAAATTCTTCAAACAATTT-CATAAATCTATGAGTCAAGAAGCCACTGCAGGTAACACTACATACAGA---TATATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCAGC------AAGAGTCAAATCAGAAAAACAACTCCTTGGAGATTTTTGCCTCA-CATGGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30067848 402 - 229942017 catgtgacttctgctcacagtccattgaccattactagtcacatgatgacaacttatctgcaaagaatgctgggaattatag--------GG--ATATTTGG------TGTCTACTGTTTTGGGGCACAAGTTCCATTGAATATTATTTAAA----------------CTG-AATCGCCGTTATGGGAAATTGTCTAATTGTCTAGAG-TTTTCTTCTCACAGA-----TTGACTTCATCTTTCTCAA----AAAATTCTTCAAACAATTT-CATAAATCTATGAGTCAAGAAGCCACTGCAGGTAACACTACATACAGC---TATATGGAC----CAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCAGC------AAGAGTCAAATCAGAAAAACAACTCCTTGGAGAATTTTGCCTCA-CAAGGTTTGACTTTTCCTCTGGGTGACAGATAACTTGA i ponAbe2.chr1 C 0 M 176 s nomLeu3.chr24 484536 426 - 28733288 catattgcttctgctcaccgtccattggtcagaactagtcacatggtatgaaaataagtgcaaaggagactgggaactgcag--------GGCAGCATGTGGACTATTTGACAAATGTCTT-GGCCAAAGGCTCCATTGAATATCATTCAAAGTTGTGTTTAATTAGTCTGCAATTTCCTGTATGGTGAATTGTC-AACTGCC--------CTCTTCTCACAGG-----TTGATTCCATCTTTCTCAA----GAAGCCATTCAGTCAATGC-C-TAAAGCCCTGGGTCCAAGAACTCTTACAGGTCACACAACATGAAGC---CAAATGGAGAGGGATAGTCCCTCGGGGCC----ACAGCCAGGATTCTGGAG--CCCAGA------AAGGGTCCAGCCAGAAAGATGACCCCTTAAAGAATTTCACCTCA-AAAGAATTAACTATTGCCCTGGGTGACAGATAACTTGA i nomLeu3.chr24 I 1123 C 0 s rheMac3.chr1 33364121 416 + 229590362 aatgctacttctgctcacagtccattgaccattaccagtcacatgatgacaacttacctgcaaaggatgctgggaattataa--------GG--ATATTTGG------TGTCTACTGTTTGAGGGCACAAGTTCCATTGAATATTATTCAAAGTGTTTTGCA------CTG-AATCGCCCTTATGGGAAATTGTCTAATTGTCCTCAGTTTTTCTTCTCACAGA-----TTGACTTCAACTTTCTCAA-----AATTTCTTCAAACAATTT-CATAAATCTATGAGTCAAGAAGCCACTTCAGGTAACACTACATACAGC---TGTATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCTGC------AAGAGTCAAATCAGAAAAACAACTCCTTGGAGAATTTTGCCTCA-CAAGGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29875263 416 - 227556264 aatgctacttctgctcacagtccattgaccattaccagtcacatgatgacaacttacctgcaaaggatgctgggaattataa--------GG--ATATTTGG------TGTCTACTGTTTGAGGGCACAAGTTCCATTGAATATTATTCAAAGTGTTTTGCA------CTG-AATCGCCCTTATGGGAAATTGTCTAATTGTCCTCAGTTTTTCTTCTCACAGA-----TTGACTTCAACTTTCTCAA-----AATTTCTTCAAACAATTT-CATAAATCTATGAGTCAAGAAGCCACTTCAGGTAACACTACATACAGC---TGTATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCTGC------AAGAGTCAAATCAGAAAAACAACTCCTTGGAGAATTTTGCCTCA-CAAGGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32638731 415 + 220367699 CATGTTACTTCTGCTCACAGTCCATTGACCATTACCAGTCACATGATGACAACTTATCTGCAAAGGATGCTGGGAATTATAA--------GG--ATATTTTG------TGTCTACTGTTTGGGAGCACAAGTTCCATTGAATATTATTCAAAGTGTTTTGCA------CTG-AATCGCCCTTATGGGAAATTGTCTAATTGTCCTCAGTTTTTCTTCTCACAGA-----TTGACTTCAACTTTCTCAA-----AATTTCTTCAAACAATTT-CATAAATCTATGAGTCAAGAAGCCACTTCAGGTAACACTACATACAGC---TGTATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCTGC------AAGAGTCAAATCAGAAAAACAACTCCTT-GAGAATTTTGCCTCA-CAAGGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28155142 417 - 130588469 catgttacttctgctcacagtccattgaccattaccagtcacatgatgacaacttgtctgcaaaggatgctgggaattataa--------GG--ATATTTGG------TGTCTACTGTTTTGGGGCACAAGTTCCATTGAATATTATTCAAAGTGTTTTGCA------CCG-AATCGCCCTTACGGGAAATTGTCTGATTGTCTACAGTTTTTCTTCTCACAGA-----TTGACTTCATCTTTCTCAA-----AATTTCTTCAAACAATTTCCATAAATCTATGAGTCAAGAAGCCACTTCAGGTAACACTACATACAGC---TGTATGGATGGGGGAAGGACCACATGA-T----ACAGTCAAGATTTT------CTCTGC------AAGAACAAAATCAGAAAAACAACTCCTTGGAGAATTTTGCCTCA-CAACGTTTAACTTTTCCTCTGGGTGACAGATAACTTGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64614368 405 + 155834243 catgttacttcagctcacagtccattgaccattactagtcacattatgacaacttatctgcaaagcatgctgggaa-tatag--------GG--ATATTTGG------TGTATACTATCTTGGGGCACAAGTTCCATTGAATATTATTCAAAGTG--TTGCA------CTG-AATCGCCCTTATGGGAAATTGTCTAACTGTCTACAG-TTTTCTTCTCACAGG-----TTGACTTCATGTTTCTCAA----AAAATTCTTCAAACAATTT-CATAAATCTACAAGTGAAGAAACCACTGCAGGTAACAATACACACAGC---TATATGGATGGGGAAAGGACCACATGG-TAATCATGCTCAAGATTTT------CTC----------AGAGTCAAATCAGAAAAACAACTCCTTGGAGTATTTTGCCTCA-CAAGGTTTAACTTTTCCTCTGGGTGACAGA-------- i calJac3.chr7 C 0 C 0 s mm10.chr4 25416832 364 - 156508116 CAAGACATCTTTGATCACAGTTCATTGGT------------CATGGCAACAAAGGAGCCGCAGAGGATGCTGGGAAATGCAG--------GA--CCGTTTTG------TGCCTGCTGTCTAGGGCACTGAACTCCATTGAATATTCCTCA-------GTTCA------CTG---------CTATGAGCGAACCAGGAATTGGCTACAG------------AGTA-----TTGACTTCATC---CTGAAAATGAAACTTATT----CTATTT-CACACATATATGAGTCCAGCTGTCTCTGTAGGTTACACCCCATGCAGCCTACGTACTAAT-------------------T----ACAATGCAAATGTA------CCCCCCCCCCAGAGAGGGCAGAGCTCAAAGGCAGCTCCAGAGAGGACCCACCTTCC-CAAGG-CTACTTTCTCTTATGACTGA-GTATCGCTAGA i mm10.chr4 C 0 C 0 s canFam3.chr2 14994257 422 - 85426708 CACGTCACTCCCGCCCTCGGTCC-----CAGGTCCTAGTCACAGGGTGACAGCTTAACTGTTGGGGATGCTGGGGAAAACAAATAGGGCCAG--CTACCTGA------CCTATCCTGCTGT-GGGCTCCAGCTCCACTGAGGATTTTTCAAAGTTTATTGCA------CTG-AATTATCCATAAGG--------CGAATTATCTATAG-TTTCCTTCCCCTAGGCTGACTTGATTTCATCTTTCTCAA-----GGATTCTTTAGTCTACTT-CTCAAATT--TGAGTCAAGAAGCCTCTGCAGGCCATGCCACGCACAGC---CTTGT-GATGGGGAAGGCAGCGCATAA-TGATCAGAGTCAGGATTTGGGAATCCCCCAA------AAGGGTCAAACCAGAGAGACAGCCCCTTAGAGGATTTCCCTTCAGCAAGGCTTAGCGTTTCCTCTGGCTGGCAGACAACTTGA i canFam3.chr2 C 0 C 0 a score=32728.000000 s hg38.chr1_KI270760v1_alt 44029 12 + 109528 ACACCACCTTCT- s panTro4.chr1 30479866 12 + 228333871 ACACCACCTTCT- i panTro4.chr1 C 0 C 0 s nomLeu3.chr24 484962 12 - 28733288 ACACCACCTTTC- i nomLeu3.chr24 C 0 I 1 s rheMac3.chr1 33364537 12 + 229590362 ACACCACCTTTC- i rheMac3.chr1 C 0 I 1 s macFas5.chr1 29875679 12 - 227556264 ACACCACCTTTC- i macFas5.chr1 C 0 I 1 s papAnu2.chr1 32639146 12 + 220367699 ACACCACCTTTC- i papAnu2.chr1 C 0 I 1 s chlSab2.chr20 28155559 12 - 130588469 ACACCACCTTTC- i chlSab2.chr20 C 0 I 1 s calJac3.chr7 64614773 12 + 155834243 ACACCACATTTC- i calJac3.chr7 C 0 I 1 s mm10.chr4 25417196 12 - 156508116 TTCCCATCTTCC- i mm10.chr4 C 0 C 0 s canFam3.chr2 14994679 13 - 85426708 ACATCGCCTTTCT i canFam3.chr2 C 0 C 0 e ponAbe2.chr1 30068250 176 - 229942017 M a score=1183488.000000 s hg38.chr1_KI270760v1_alt 44041 307 + 109528 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGG-CCAGAGTCTCCAAATAGAGCCTCA-TTAATGGGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACACGGCCAATCCATCACATCGCCTTACCTGAGGGGTGTTTACGTCTCTGGGTTACCAGGATCAACTTCCCAGGAGGCTTCAAGAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC s panTro4.chr1 30479878 307 + 228333871 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGTGGTAAAGG-CCAGAGTCTCCAAATAGAGCCTCA-TTAATGGGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACATGGCCAATCCATCACATCGCCTTACCTGAGGGGTGTTTACGTCTCTGGGTTACCAGGATCACCTTCCCAGGAGGCTTCAAGAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30068426 308 - 229942017 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGGCCCAGAGTCTCCAAATGGAGCCTCATTTAATGAGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACACGGCCAGTCCATCTCATCTCCTTACCTGAGGGGTGTTTACGTCTCTGGGTCACCAGGATCACCTTCCCAGGAGGCTTCAAGAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGG-AAAGACCC i ponAbe2.chr1 M 176 C 0 s nomLeu3.chr24 484975 301 - 28733288 CCTGGATGTGACAGGAACAGAAAAGAGAAACGAGATTGGGATGAGAG-CCGGCATCTCCAAGCAGAACCTCA-TTAGTGAGAAGGA-G-CGGGTGTTACCTTTGAGTGAGGTGTTGGATG--AGTGAC----TGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACGAGGAGACATGGCCAGCCCATCACATCTCCTCACCTGAGGGGTGTTAACATCTCTGAGTGACGAGGGCTACCCTCCCGGGAGGCTTCAGGAACCAGGAAACTGAAGGGCACAGAGTCATGGGCCTGGACGAGACCC i nomLeu3.chr24 I 1 C 0 s rheMac3.chr1 33364550 307 + 229590362 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGG-CCAGAGTCTCCAAATGGAGCCTCA-TTAATGGGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACACGGCCAATCCATCACATCTCCTTACCTGAGGGGTGTTTACGTCTCTGGGTTACCAGGATCACCTTCCCAGGAGGCTTCAGAAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC i rheMac3.chr1 I 1 C 0 s macFas5.chr1 29875692 307 - 227556264 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGG-CCAGAGTCTCCAAATGGAGCCTCA-TTAATGGGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACATGGCCAATCCATCACATCTCCTTACCTGAGGGGTGTTTACGTCTCTGGGTTACCAGGATCACCTTCCCAGGGGGCTTCAGAAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC i macFas5.chr1 I 1 C 0 s papAnu2.chr1 32639159 307 + 220367699 CCTGGATGTgacaggaagggaaaggagaaacaaGATTGGGGTAAAGG-CCAGAGTCTCCAAATGGAGCCTCA-TTAATGGGAAAGA-G-CGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACACGGCCAATCCATCACATCTCCTTACCTGAGGGGTGTTTACGTCTCTGGGTTACCAGGATCACCTTCCCAGGAGGCTTCAGAAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC i papAnu2.chr1 I 1 C 0 s chlSab2.chr20 28155572 307 - 130588469 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGG-CCAGAGTCTCCAAATGGAGCCTCA-TTAATGGGAAAGA-G-TGGGTGTTAGCTCTGAGTGAAGTGTTGGATGACAGTGACTGAGTGGCCAGGCTTGGAGCCTGCATTAAATGTGACAGCAAGCAAACCAGAAGACACGGCCAATCCATCACATCTCCTTACCTGAGGGCTGTTTACGTCTCTGGGTTACCAGGATCACCTTCCCAAGAGGCTTCAGAAGCCAGGAAATCAAAGGTCACAGAGTCATGGGCCTGGAAAAGACCC i chlSab2.chr20 I 1 C 0 s calJac3.chr7 64614786 307 + 155834243 CCTGGATGTGACAGGAAGGGAAAGGAGAAACAAGATTGGGGTAAAGG-CCAGAGTCTCCAAATGGAGGCTCA-TGAATGGGAAAGA-G-TGGGCGTTAGCTCTGAGTGAAGTGTTGGATGGCAGTGACTGACTGGCCAGGCTTGGAACCTGCATTAAATGTGACAGCAAGCAAACCAGGAGACACGGCCAATCCATCACATCTCCTTACCCAAGGGATGTTTACACCTCTAGGTTACCAGCATCAGCTTCCCAGGAGGCTTTAGGAGCCGGGAAATCAAAGGTTACAGAGTCATAAGCCTGGAAAAGACCC i calJac3.chr7 I 1 C 0 s mm10.chr4 25417208 253 - 156508116 TCTGGCAGAGACAGGAAAGAGAAAGGG---CAAGGCTAGAGTGCAGG-TTGAAGTCCCAAGGT--CACCTCA-TTAGTGAGAAGGA-GCCAGATGTGAGTGCCCAGGGAGGTGATTGATGATGGAGAAAGTGGGGCCAGGCTGGGAGCCTGTGTTCAGTGTGACAGCAGGGA--------------------------------------CGATTGGTGTTTCCTCTCCTGGG---------CCACCTTCCCAGGAGGCATTAGGAGCCAGAAGACCATAGT---CAGAGTTATGAGCCAGGAAGAGATCC i mm10.chr4 C 0 I 607 s canFam3.chr2 14994692 307 - 85426708 CCTGGATGTGACAGGAAGGGAAA-GAGAAACAAGATTGGAGTGAGGG-CTGGAGTCCCCAAGAAGAGTCTCA-TTAGTGGGAAGGATG-CAGGGGCCAGCTCTGAGTGAGGTGTTCAATGACAGTGACCGAGTGGCTAGGCTCGGAGCCTGCATTAAACGTGACAGCAAACAAACCAGGACATGTGGCCCATTCATCACGTCTCCTGACATGAGGGGGATTAATGTGTCTGAGTGACAAGGGCCACCTGCCCAGGAGGCTTCTGGAGCCAGGAAAACAAAAGGCACAGAGTCATGGGCCTGCAGGGGACCC i canFam3.chr2 C 0 C 0 a score=30150.000000 s hg38.chr1_KI270760v1_alt 44348 8 + 109528 CAGAGCAG s panTro4.chr1 30480185 8 + 228333871 CAGAGCAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30068734 8 - 229942017 CAGAGCAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 485276 8 - 28733288 CAGAGCAG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33364857 8 + 229590362 CAGAGCAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29875999 8 - 227556264 CAGAGCAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32639466 8 + 220367699 CAGAGCAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28155879 8 - 130588469 CAGAGCAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64615093 8 + 155834243 TAGAGCAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14994999 8 - 85426708 CAGAATGG i canFam3.chr2 C 0 I 113 e mm10.chr4 25417461 607 - 156508116 I a score=120756.000000 s hg38.chr1_KI270760v1_alt 44356 42 + 109528 TTTCCATAATTTAACACTGGCGCGTGCTCCTGCAAAGCTCCC s panTro4.chr1 30480193 42 + 228333871 TTTCCATAATTTAACACTGGCGCGTGCTCCTGCAAAGCTCCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30068742 42 - 229942017 TTTCCATAATTTAATACTGGCGCGTGTTCCTGCAAAGCTCCc i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 485284 42 - 28733288 TTTCCACAACTTCACAATGGCCCATGCTTCTGCagagctctc i nomLeu3.chr24 C 0 I 1680 s rheMac3.chr1 33364865 42 + 229590362 TTTCCATAATTTAACACTGGTGCGTGCTCCTGCAAAGCTCCc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29876007 42 - 227556264 TTTCCATAATTTAACACTGGTGCGTGCTCCTGCAAAGCTCCc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32639474 42 + 220367699 TTTCCATAATTTAACACTGGTGCGTGCTCCTGCAAAGCTCCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28155887 42 - 130588469 TTTCCATAATTTAACACTGGTGCGTGCTCCTGCAAAGCTCCc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64615101 42 + 155834243 TTTCCACCATTGAACACTGGCGGGTGTTCCTGCAAAGCTTCc i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e canFam3.chr2 14995007 113 - 85426708 I a score=531739.000000 s hg38.chr1_KI270760v1_alt 44398 228 + 109528 TTtgattgcattactgcacttcagcctgggtgcagtgagacggagaccctgtctcaaaaggaaaaagaaaaaTCCAAGTGGGGAGtaaaatgggttgtactgaaaaacacaggctctggaatagttaaaccaatcttgacaaggaaa----aaaatgggaggaatcactctatctgatgtgaaggcctactgcgcagctacattagtcaagatactgtggtattggtggGTA s panTro4.chr1 30480235 228 + 228333871 TTtgattgcattactgcacttcagcctgggtgcagtgagacagagaccctgtctcaaaaggaaaaagaaaaaTCCAAGTGGGGAGtaaaatgggttgtactgaaaaacacaggctctggaatagttaaaccaatcttgacaaagaaa----aaaatgggaggaatcactctatctgatatgaaggcctactgcgcagctacattagtcaagatactgtggtattggtggGTA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30068784 228 - 229942017 tttgattgcattactgcacttcagcctgggtgtggtgagacggagaccctgtctcaaaaggaaaaagaaaaaTCCAAGTGGGGAGtaaaatgggttgtactgaaaaacacaggctctggaatagttaaaccaaccttgacaaagaag----aaaatgggaggaatcactctatctgacatgaaggcctactgcgcagctacattagtcaaggtactgtggtattggtggGTA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33364907 228 + 229590362 cttgattgcatcactgcacttcagcctgggtgcagtcagatggagaccctgtctcaaaagaaaaaagaaaaaTCCTAGTGGGGAGTAGAATGGGttgttttgaaaaacacaggctctggaatagttaaaccaatcttgacaaagaag----aaaatgggaggaatcattctatctgacatgaaggcctcctgtgcagctacattaatcaggaTACtgtggtattggtggata i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29876049 228 - 227556264 cttgattgcatcactgcacttcagcctgggtgcagtcagatggagaccctgtctcaaaagaaaaaagaaaaaTCCTAGTGGGGAGTAGAATGGGttgttttgaaaaacacaggctctggaatagttaaaccaatcttgacaaagaag----aaaatgggaggaatcattctatctgacatgaaggcctcctgtgcagctacattaatcaagaTACtgtggtattggtggata i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32639516 228 + 220367699 cttgattgcatcactgcacttcagcctgggtgcagtcagatagagaccctgtctcaaaagaaaaaagaaaaatcctagtGGGGAGTAGAATGGGTTGTTTTGAAAAACACAGGCTCTGGAATAGTTAAACCAAtcttgacaaagaag----aaaatgggaggAATCATTCTATCTGACATGAAGGCCTCCTGTGCAGCTACATTAATCAAGACACTGTGGTATTGGTAGATA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28155929 228 - 130588469 cttgattgcatcactgcacttcagcctgggtgcagtcagatggagaccctgtctcaaaagaaaaaagaaaaaTCCTAGTGGGGAGTAGAATGGGTTGTTTTgaaaaacacaggctctggagtggttaaaccaatcttgacaaagaag----aaaatgggaggaatcactctatctgacatgaaggcctcctgtgcagctacattaatcaagacactgtggtattggtggaTA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64615143 232 + 155834243 tatgatggcaccactgcactccagcctgggtgcagtgagacagagaccctgtcgcaaaagaaaaaagaaaaGTCCACGTGGGGAATGAAATGGGGtgtattgaaaaacgcaggttctggaataggtaaaccaatcttgacaaagaagacgaaaaatgggaggaatcactctatctgacatgaaggcctactgcgcagctaagttaatccagacactgcggtattggtggaAA i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14995007 113 - 85426708 I a score=1097281.000000 s hg38.chr1_KI270760v1_alt 44626 454 + 109528 ccctccaaaaagatacgttgaagctctaatccctgggatttgtgaatgtgaccttatttggaaattgggtctttgcagatataatcaagtttagacaaggttactagtgtgggccctaatccaataaggcaggtgtccttgtaacaaaagggaaattttgacaaagggacacacagggagaatgccgtgtgaagaaggaagcagaaagaggaatgatgcatctgcaaagctgaggaacgcccaggagagccagaagctggaagaggcaagaaaggatcctcccctggaggattcggagggagca---tggccctaccaatgccttggttttggacttctgacctccagaactgtgagacaatgcattgct-tggttttaagccactcagtttgtggtacgttgctacctcagcccttggaaactattacaGGGGt-ttttgtccccagtcgttagaagg- s panTro4.chr1 30480463 454 + 228333871 ccctccaaaaagatacgttgaagctctaatccctgggatttgtgaatgtgaccttatttggaaattgggtctttgcagatataatcaagtttagacaaggttactagtgtgggccctaatccaatagggcaggtgtccttgtaacaaaagggaaattttgacaaagggacacacagggagaatgccgtgtgaagaaggaagcagaaagaggaatgatgcatctgcaaagctgaggaatgcccaggagagccagaagctggaagaggcaagaaaggatcctcccctggaggattcggagggagca---tggccctaccaatgccttggttttggacttctgacctccagaactgtgagacaatgcattgct-tggttttaagccactcagtttgtggtacgttgctacctcagcccttggaaactattacaGGGGt-ttttgtccccagtcgttagaagg- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30069012 453 - 229942017 ccctccaaaaagatacgttgaagctctaatccctgggacttgtgaatgtgaccttatttggaaattgggtctttgcagatataatcaagtttagacaaggttactagtgtgggccctaatccaataggacaggtgtccttataacaaaa-ggaaattttgacaaagggacacacagggagaatgccgtgtgaagaaggaagcagaaagaggaatgatacatctgcaaagctgaggaatgcccaggagagccagaagctggaagaggcaagaaaggatcctcccctggaggattcggagggagca---tggccctaccaatgccttgattttggacttctgacctccagaactgtgagacaatgcattgct-tggttttaagccactcagtttgtggtacattgctacctcagcccttggaaactattacaGAGGt-ttttgtcccaagtcgttagaagg- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33365135 444 + 229590362 ccctccaaaaagatacgttgaagttctaatccctggt-cttgtgaatgtgaccttatttggaaattggatctttgcagatataatcaagtttagacaaggtcactagtgtaggctctaatccaataggaccggtgccgttataagaagagggacattttgacaaagggatgcacagggagaatgccgtgtgaagaaggaagcagaaagaggagtgatgcatctgcaaagctaaggaatgcccaggagagccaaaagctggaagaggcaagaaaggatcctcccctggaggattgggagggagca---tggccctgccaatgccttggttttggacttctgacctccagaactgtgagacaatgcattgct-tgg-tttaagccactccatttg--------tgctacctcagccctaggaaactattacaGGGGt-ttttgtccccggtcgttagaagg- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29876277 444 - 227556264 ccctccaaaaagatacgttgaagttctagtccctggt-cttgtgaatgtgaccttatttggaaattggatctttgcagatataatcaagtttagacaaggtcactagtgtaggctctaatccaataggaccggtgcccttataagaagagggacattttgacaaagggatgcacagggagaatgccgtgtgaagaaggaagcagaaagaggagtgatgcatctgcaaagctaaggaatgcccaggagagccaaaagctggaagaggcaagaaaggatcctcccctggaggattgggagggagca---tggccctgccaatgccttggttttggacttctgacctccagaactgtgagacaatgcattgct-tgg-tttaagccactccatttg--------tgctacctcagccctaggaaactattacaGGGGt-ttttgtccccggtcgttagaagg- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32639744 444 + 220367699 CCCTCCAAAAAGATACGTTGAAGTTCTAATCCCTGGt-cttgtgaatgtgaccttatttggaaattggatctttgcagatataatcaagttTAGACAAGATCACTAGTGTAGGCTCTAATCCAATAGGACCAGTGCCgttataagaagagggaaattttgACAAAGGGATGCACAGGGAGAATGCTGTGtgaagaaggaagcagaaagaggAGTGATGCATCTGCAAAGCTAAGGAATGCCCAGGAGagccaaaagctggaagaggcaagaaaggatcCTCCCCTGGAGGATtgggagggagca---tggccctgccaatgccttggttttggacttctgacctccagaactgtgagacaatgcaTTGCT-TGG-TTTAAGCCACTCCGTTTG--------TGCTACCTCAGCCCTAGGAAACTATTACAGGGGT-TTTTGTCCCCAGTCGTTAGAAGG- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28156157 430 - 130588469 CCCTCCAAAAAGATACGG--------------CTGGT-CTTGTgaatgtgaccttatttggaaattgggtctttgcagatataatcaagtttagacaaggtcactagtgtaggctctaatccaataggaccggtgtccttataggaagagggaaattttgacaaagggatacacagggagaatgctgcatgaagaaggaagcagaaagaggagtgatgcatctgcaaagctaaggaatgcccaggagagccaaaagctggaagaggcaagaaaggatcttcccctgtaggattgggagggagca---tgaccctaccaatgccttggtttcgaacgtctgacctccagaactgtgagacaatgcattgct-tgg-tttaagccactcagtttg--------tgctacctcagtcctaggaaactattacaGGGGt-ttttgtccccagtcattagaagg- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64615375 449 + 155834243 CTctcccaacagacgtgctgaagccgtgatccctgggactcgtgaatgtgaccttatttggaaactgggtcgttgcaggtatcgtcaggtttacacaaggtcattagcgtgggccctaatcc-ataaaaccagtgtccttgcaagaagagggaaattttgacaaagagacgtagaggcagaatgtcgtgtgaagaagggagcagaaagtggagggacccatctgcaatgctaaggaatgcccaggagtgccagtagctgaaagaggcaagagagggtcctcccttggaggactc----ggagca---tagccttacccatgcctcgattt-ggacttctgagctccagaaccgcgagacaatgcacggct-tggttttaagccactccgtttgtggtattttgctacctcagccctaggaaactaggacaGGGTCGTTTTGTCCCCAGTTGTTAGAAGG- i calJac3.chr7 C 0 I 317 s canFam3.chr2 14995120 439 - 85426708 ccctcaaaaaagatatagtgaagcctcagccccagta-tctgttaatgagaccttatttggaaatagggtctttgcagatgtaatcaaact---agagggtcattgggatgggccctaatccggcaggtctggtgtccttgtaagaaga-ggaactgcagacccagagacacccagggggaaggccgtgtgaacacacaggca-agacctgagtgaggcatctacaa-gccaaggtactcct-ggggccccagaaggtaggagaaggaatatg----ccttccctgggggctctggagggagcaagcaggccttgctgacaccttgatttgggacttccagccttcacagctgtgaggcaacacatttctgttgttttaaatcacccag-atgtgg-----cacttcgttagccccaagaaatta--ataGAGCA-TGTTGCCctccatctgccgaaaga i canFam3.chr2 I 113 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I a score=1651188.000000 s hg38.chr1_KI270760v1_alt 45080 668 + 109528 gtaaactgagccccagat-gggaaatgtct-gcccaagtctacgcagccgtaagtggaggagcgggctgagttaccaggcctctggcttccagGTGGCCACCATCCCTCTCAGAGTGAATCAGTAGAACTGTGGGCTCCTCCAAGACCCCGGAGGAGAAATGATCCCTGCCAGAGCTTTCTTCACCGTGAGGAAGGGACCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAGGCTGAC-ACCTCGTTGGCTCCTGAA--------GGCAGTTGGGC------GAATTCAAGGCTGAGAGAGGTGGAGGCCCCTCCACGGTCCTCA-----------------CCAGGACCATGCTCAGGGA-------------------CCTCAGCTCTCCTGCCAAATGTGTCTCATGTTGGGCCCCTTCATCTTCCCCATATCCACTGCCCCATTTAGGCCATTATCCCCTGCCTTCTGGACAGGCGTCAGAGCCTCCGCACCGGCCACCCACCAACCCCtccttcagcaggcacttgccaagcacctactgtgtaccagggcccatgcctggtgctgaggccagggtg--gacagcacagaagttactgctgtggatttcacttcatttactgtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcagagctgggat s panTro4.chr1 30480917 668 + 228333871 gtaaactgagccccagat-gggaaatgtct-gcccaagtccacgcagccgtaagtggaggagcgggctgcgttaccaggcctctggcttccagGTGGCCACCATCCCTCTCAGAGTGAATCAGTAGAACTGTGGGCTCCTCCAAGACCCCGGAGGAGAAATGATCCCTGCCAGAGCTTTCTTCACCGTGAGGAAGGGACCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAGGCTGAC-ACCTCGTTGGCTCCTGAA--------GGCAGTTGGGC------GAATTCAAGGCTGAGAGAGGTGGAGGCCCCTCCACGGTCCTCA-----------------CCAGGACCACGCTCAGGGA-------------------CCTCAGCTCTCCTGCCAAATGTGTCTTATGTTGGGCCCCTTCATCTTCCCCATATCCACTGTCCCATTTAGGCCTTTATCCCCTGCCTTCTGGACAGGCGTCAGAGCCTCCACACCGGCCACCCACCAACCCCtccttcagcaagcacttgccaagcacctactgtgtatcagggcccatgcctggtgctgaggccagggtg--gacagcacagaagttactgctgtggatttcacttcatttactgtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcagagctggggt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30069465 668 - 229942017 ataaactgagccccagat-gggaaatgtct-gcccaagtccacgcagccataagtggaggagcaggctgtgttaccaggcctctggcttccaggtggccactgtccctctcaGAGTGAATCAGTAGAACTGTGGGCTCCTCCAAGACCCTGGAGGAGAATTGATCCCTGCCAGAGCTTTCTTCACCGTGAGGAAGGGACCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAGGCTGAC-ACCTCGTCGGCTCCTGAA--------GGCAGTTGGGC------GAATTCAAGGCTGAGAGAGGTGGAGGCGCCTCCACGGTCCTCA-----------------CCAGGACCATGCTCAGGGA-------------------CCTCAGCTCTCCTGCCAAATGTGTCTCATGTTGGGCCCCTTCATCTTCCCCATATCCACTGCCCCATTTAGGCCCTTATCCCCTGCCTTCTGGACAGGCGTCAGAGCCTCTGCACCGGCCACCCACCatcccctccttcagcaagcacttgccaagcacctactgtgtaccagggcccgtgcctggtgctgaggccagggtg--gacagcacagaagttactgctgtggatttcacttcatttactgtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcaaagctgggag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33365579 666 + 229590362 gtaaactgagccacagat-gggaaatgtct-gcccaagtccaagcagccataagtggaggagcaagctgcattaccaggcttctggcttccagGTGGCCACCGTCCCTCTCAGAGCGAATCAGTAGAACTGTGGGCTCCTCCAAGATCCTGGAGGAGAACTGATCCCTGCCAGAGCTTTCTTCACCATGAGGAAGGGATCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAAGCTGAC-ACCTCATTGGCTCCTAAA--------GGCAGTTGGGC------GAATTCAAGGCTGAGCTAGGTGGAGGCCCCTCCATGGTCCTCA-----------------CCAGGACCACG-TCAGAGA-------------------CCACAGCTCTCCTGCCAAGTGTGTCTCACACTGGGCCCCTTCATGTCCCCGACAACCACTGCCCCATTTAGGCCCTTAACTCCTGCCTTCTGGACAGGCGTTGGAGCCTCTGCACCGGCCACCTACCatcccctccttcagcaagctcttgccgagcacctactgtgt-ccagggcccgtgcctgctgctgaggctggaatg--gacagcacagaagttactgctgtggatttcacttcacttacagtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcagagccaggtg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29876721 666 - 227556264 gtaaactgagccacagat-gggaaatgtct-gcccaagtccaagcagccataagtggaggagcaagctgcattaccaggcttctggcttcCAGGTGGCCACCGTCCCTCTCAGAGCAAATCAGTAGAACTGTGGGCTCCTCCAAGATGCTGGAGGAGAACTGATCCCTGCCAGAGCTTTCTTCACCATGAGGAAGGGATCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAAGCTGAC-ACCTCATTGGCTCCTAAA--------GGCAGTTGGGC------GAATTCAAGGCTGAGCTAGGTGGAGGCCCCTCCATGGTCCTCA-----------------CCAGGACCACG-TCAGAGA-------------------CCACAGCTCTCCTGCCAAGTGTGTCTCACACTGGGCCCCTTCATGTCCCCGACAACCACTGCCCCATTTAGGCCCTTAACTCCTGCCTTCTGGACAGGCATTGGAGCCTCTGCACCGGCCACCTACCatcccctccttcagcaagctcttgccgagcacctactgtgt-ccagggcctgtgcctgctgctgaggccggaatg--gacagcacagaagttactgctgtggatttcacttcacttacagtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcagagccaggtg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32640188 666 + 220367699 GTAAACTGAGCCACAGAT-GGGAAATGTCT-GCCCAAGTCCAAGCAGCCATAAGTGGAGGAGCAGGCTGCATTACCAGGCTTCTGGCTTCCGGGTGGCCACCGTCCCTCTCAGAGCGAATCAGTAGAACTGTGGGCTCCTCCAAGATCCTGGAGGAGAACTGATCCCTGCCAGAGCTTTCTTCACCATGAGGAAGGGATCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAAGCTGAC-ACCTCATTGGCTCCTAAA--------GGCAGTTGAGC------GAATTCAAGGCTGAGGGAGCTGGAGGCCCCTCCATGGTCCTCA-----------------CCAGGACCACG-TCAGAGA-------------------CCACAGCTCTCCTGCCAAGTGTATCTCACACTGGGCCCCTTCATGTCCCCGACAACCACTGCCCCATTTAGGCCGTTAACTCCTGCCTTCTGGACAGGCGTCGGAGCCTCTGCACCGGCCACCTACCATCCCCTCCTTCAGCAAGCTCTTGCCGAGCACCTACTGTGT-CCAGGGCCCGTGCCTGCTGCTGAGGCCGGAATG--GACAGCACAGCAGTTACTGCTGTGGATTTCACTTCACTTACAGTGAAATGAGATACAGCAAATGAACCCATGACACAAG---ACAacacattccaggcagaagg-----tgAGGGGAACTCAGAGCCAGGTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28156587 667 - 130588469 gtaaattgagccacagat-gggaaacgtct-gcccaactccaagcagccgtacgtggaggagcaggctgcgttgccaggcttctggcttccaggtggccactgtccctctcaGAGCAAATCAGTAGAACTGTGGGCTCCTCCAAGATCCTGGAGGAGAATTGATCCCTGCCAGAGCTTTCTTCACCATGAGGAAGGGATCTGTTTTCCCCTTCCAGATGTAAAGAGGAATTTTAGGCCAGTTTTGAAGCTGAC-ACCTCATTGGCTCCTAAA--------GGCAGTTGGGT------GAATTCAAGGCTGAGGGAGGTGGAGGCCCCTCCGTGGTCCTCA-----------------CCAAGACCATG-TCAGGGA-------------------CCACAGCTCTCCTGCCAAGTGTGTCTCACATTGGGCCCCTTCATCTCCCCGACAACCACTGCCCCATTTAGGCCCTTAACTCCTGCCTTCTGGACAGGCGTCGGAGCCTCCACACCGGCCACCTACCatcccctccttcagcaagctcttgccgagcacctactgtgtaccagggcctgtgcctgctgctgaggccgggatg--gacagcacagaagttactgctgtggatttcacttcacttacagtgaaatgagacacagcaaatgaacccatgacacaag---acaacacattccaggcagaagg-----tgaggggaactcagagccaggag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64616141 652 + 155834243 gtaaactgagccacagat-gggaaatgtct-gcctaagtccatgcagccgtaagtggaggagcaggctgcgttaccaggcctctggcttccagGTGGCCACCGTCCCTCTCAGAGAGAATCAGCAGAGCTATGGGCTCCTCCAAGGCCCTGGAGGAGCACTGATCCCTGCCAGAGCTTTCTTCCCCATGAGGAAGGGATCTGTTTTCCTCTTCCAGAGGTAAAGAGGAAGTTTAGGCCAGTTTGGAGGCTGAA-ACCTCATTGACTCCTCAA--------GGCAGTCAGGT------GAATTCAAGGCTGGGGGAGGTGGAGACACCTCCCTGGTCCTCA-----------------AC----------TCAGGGA-------------------CCCCGGCGCTCCTGTCAAATGTGTCTC-----GGGCCCTTTCACCTCCCCCACAACCACTGCCCTGTCTAGGCCCTTATTCCCTCCCTTCTGAACTGGAGTCTGAGCCTCCTCCCCAGCCACCCACCATTCCCACCttcagcaagcacttgcccagcaccgactgggtaccagggcccatggctggtgctgaggctggggtg--gacagcactgaagttcctgACGTGGGTTT-ATGTCCTTTGCAGTGAAATGAGATGCAGAAAATGAATCCATGACACAAG---ACAGAACATTGCAGGCAGTAGG-----TGAGAAGAACTCAGAGCTGGGAG i calJac3.chr7 I 317 C 0 s canFam3.chr2 14995559 684 - 85426708 gtaatctgagccacagagagggccatgcccggcccaaggtcacacagccgcaagtgggggagcagactgaggagccaaggccctGGTCGC------------GCTCCTGCTGGAGCCGCTC-----AAGTGCGGGCTCCTGCGGGGCCCAGGAGGAGCTGCTGCCCTTGCCAGAGCTCCCTTCTCTGCAAGGAGTGGACCTGCGTTCCCCTCCTGGGTGCAGCAGGGAACTCTAGCCCAGTTTCGAGGCTGATAACCTGATTAACCACTCAAGTGTGGACGGCAGGTGGGCGACTGAGAATTCAAGGCCGAGCGAGGTGGAGCTACCGGGACGGTCGTTGGGTTCCTGGAGGAGAGTCTGGAGCAGCGCTCAGAGAGGGGGAGTAGCTGGGGTGGCCCCACGGTTCCTGCTGAACGCGTCTTATGTGAGCCCTCCTC---------------------------AAGCCCTAATCCTCTGCCTTCTGAACAAGTGCCAGAGCCCCCCCATGCCCCACTAACCACTGCCCCCttcagcaaacaactattgagc-ccaactgtatacccgagcctgcgcttggtgctgaggggatagtggtggcaacactg-agcctttaccatccactccaccgcactcacagtgagatgaggatcagcacataaacccgggattccagcgtgggacacgctg-agacagaaggcaacctgaggcagacggggggttagggt i canFam3.chr2 C 0 I 170 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I a score=581164.000000 s hg38.chr1_KI270760v1_alt 45748 304 + 109528 atctgtagttggaaagtcctgggcatggtcacgaaacacccagaagcttggtcaggctgcagcaggatgaggaggg-----------------------------------------------cgtaggaggtccgagagatggtggacagatcaggtaaaggccttggaggcctcaggagggcccttagattccatgtgggtg---tgaggg-tgagaagaaagcaaggtgacctga---------------------------gggttgaggagga----------gtgaggtgacctgaGGATGGAGGGGGAGTGAGGTGACCCTGGG----------------------------GTTGAGGGGGAGTGAGGTGACATGGGGATTGAAGGAGACTGAGGTGACCTGGGGATGGAGG s panTro4.chr1 30481585 304 + 228333871 atctgtagttggaaagtcctgggcatggtcatgaaacacccagaagcttggtcaggctgcagcaggataaggaggg-----------------------------------------------cgtaggaggtctgagagatggtggacagatcaagtaaaggccttggaagcctcaggagggcccttagattccatgtgggtg---tgaggg-tgagaagaaagcaaggtgacctga---------------------------gggttgaggagga----------gtgaggtgacctgaGGATGGACGGGGAGTGAGGTGACCCTAGG----------------------------GTTGAGGGGGAGTGAGGTGACATGGGGATTGAAGGAAACTGAGGTGCCCTGggggtggagg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070133 331 - 229942017 atctgcagtgggacagtcctgggcatggtcacgaaacacccagaagcttggtcaggctgcagcaggatgaggaggg-----------------------------------------------cgtaggaggtccgagagatggtggacagatcaggtaaaggccttggaggccccaggagggcccttagattccacgtgggtg---tgaggg-tgagaagAAAGCAAGGTGACCTGAGGGTGGAGGGGGAGTGAGGTGACCCTGGGGTTGAGGGGGA----------GTGGGGTGACCTGGGGATTGAAGGAGACTGAGGTGACCTGggg----------------------------gtggaaggggagtgaggtgacctgggggtggagggggagtgaggtgacctgggggtggagg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366245 304 + 229590362 atctgcagtgggaaagtcctgggcatggtcacgaaacacccagaagcttcatcaggctgcagcaggatgaggaggg-----------------------------------------------cgtaggagatccaagagatggtagacagatcaggtaaaggccttggaggcctcaggaggggccttagatgtcatgcaggtg---cgaggg-tgagaagaaagcaaggtgacctga---------------------------gggtggaggggga----------gtgaggtgacctgaGGGTGGAGGGGGAGTGAGGTGACCCTGAG----------------------------GTTGAGGGGGAGTGAGGTGACCTGGGGGTGGAGGGAGAGTGAGGTGACCTGGGGGGGGAGG i rheMac3.chr1 C 0 T 128 s macFas5.chr1 29877387 277 - 227556264 atctgcagtgggaaagtcctgggcatggtcatgaaacacccaaaagcttcatcaggctgcagcaggatgaggaggg-----------------------------------------------cgtaggagatccaagagatggtagacagatcaggtaaaggccttggaggcctcaggaggggccttagatgtcatgcaggtg---cgaggg-tgagaagaaagcaaggtgacctga---------------------------gggtggaggggga----------gtgaggtgacctgaGGGTGGAGGGGGAGTGAGGTGACCTGAGA----------------------------GTTGAGGGGGAGTGAGGTGACCTGAGGGTGGAGG--------------------------- i macFas5.chr1 C 0 I 1 s papAnu2.chr1 32640854 379 + 220367699 ATCTGTAGTGGGAAAGTCCTGGGCATGGTCACGAAACACCCAGAAGCTTCATCGGGCTGCAGCAGGATGAGGAGGGACACTCCGTTTGTGCTACCTCAGccctaggaaagagatccaagagatcctaggagatccaagagatGGTAGACAGATCAGGTAAAGGCCTTGGAGGCCTCAGGAGGGGCCTTAGATGTCATGCAAGTG---CGAGGG-TGAGAAGAAAGCAaggtgacctga---------------------------gggtggaggggga----------gtgaggtgacctgagggttgagggggagtgaggtgacctgagggtggagggggagtgaggtgaccctgggtgttgagggggagtgaggtgacctggaggttgaggaggagtgaggtgacctgagggtggagg i papAnu2.chr1 C 0 I 27 s chlSab2.chr20 28157254 304 - 130588469 atctgcagtgggaaagtcctgggcatggtcacgaaacacccagaagcttcatcaggctgcagcaggatgaggaggg-----------------------------------------------cgtaggagatccgagagatggtagacagatcaggtaAAGGCCTTGGAGGTCTCAGGAGGGGCCTTAGATTTCATGCAGGTG---TGAGGG-TGAGAAGAAAGCAAGGTGA-CTGA---------------------------GGGTTGAGGGGGA----------GTGAGGTGACCTGAGGGTGGAGGGGGAGTGAGGTGACCTTGGG---------------------------TGTTGAGGGGGAGTGAGGTGACCTGGGGGTGGAGGGAGAGTGAGGTGACCTGGGGGTGGAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64616793 313 + 155834243 ATCTGCAATGGGAAAGGACTAGGCATGATCGCCAAACACCCAGACACTTCCTCAGGCTGCAGCAGGATGAGGAGGG-----------------------------------------------CGTAGAAGGCCCCAGAGACGACAGAAAGAGCAGGTAAAGGCCTTAGAGGCCTCAGGAGGGGCCTCGAAAGAAAGTGAGGTGACCTGAGTACTGAGGGGAAG--AAGGTGACCGGA---------------------------GTGTTGAGAGGAGGGAGGTGACCGGGAGGTGACCTGAGTACtga-ggggagggaggtgacctgagt----------------------------gttga-ggggagggaggtgacctgagtgttgagg-ggagggaggtgacctgagctttgagg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I a score=31522.000000 s hg38.chr1_KI270760v1_alt 46052 27 + 109528 GGTAGTGAGGTGACCTGGGGGTGGAGG s panTro4.chr1 30481889 27 + 228333871 gggagtgaggtgacctgagggtggagg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070464 27 - 229942017 gggagtgaggtgacctgagggtggagg i ponAbe2.chr1 C 0 C 0 s papAnu2.chr1 32641260 27 + 220367699 gggagtgaggtgacctgggggtggagg i papAnu2.chr1 I 27 I 1 s chlSab2.chr20 28157558 27 - 130588469 GGGAGTGAGGTGACCTGGAGGTTGAGG i chlSab2.chr20 C 0 T 145 s calJac3.chr7 64617106 25 + 155834243 --gagggaggtgacctgggtgttgagg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e rheMac3.chr1 33366549 128 + 229590362 T e macFas5.chr1 29877664 1 - 227556264 I a score=70568.000000 s hg38.chr1_KI270760v1_alt 46079 71 + 109528 GGCGTGAGGTGACCTGGGG-ATTGAAGGAGAGTGAAGTGACCTGGGGATTGAAGGAGAGTGAGGTGACCTAG s panTro4.chr1 30481916 71 + 228333871 ggagtgaggtgacctgggg-attgaaggagagtgaggtgacctggggattgaaggagagtgaggtgacctag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070491 71 - 229942017 ggggtgaggtgacctgggg-attgaaggagagtgaggtgacctgggggtggaagaggagtgaggtgacctgg i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29877665 72 - 227556264 GGAGTGAGGTGACCCTGGGTGTTGAGGGGGAGTGAGGTGACCTGGGGGTTGAGGAGGAGTGAGGTGACCTGA i macFas5.chr1 I 1 C 0 s papAnu2.chr1 32641288 71 + 220367699 agagtgaggtgaccctgag-gttgagggggagtgaggtgacctgggtgttgagggggagtgaggtgacctgg i papAnu2.chr1 I 1 C 0 s calJac3.chr7 64617131 69 + 155834243 ggagggaggtgacctgagt-gttga-gaggagggaggtgacctgagtactgaggagaag-gaggtgacctga i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e chlSab2.chr20 28157585 145 - 130588469 T e rheMac3.chr1 33366549 128 + 229590362 T a score=22697.000000 s hg38.chr1_KI270760v1_alt 46150 16 + 109528 GGGTGGAGGGGGAGTG s panTro4.chr1 30481987 16 + 228333871 gggtggagggggagtg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070562 16 - 229942017 gggtggagggggagtg i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29877737 16 - 227556264 GGGTGGAGGGGGAGTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641359 16 + 220367699 gggtggagggagagtg i papAnu2.chr1 C 0 I 27 s chlSab2.chr20 28157440 16 - 130588469 GGGTTGAGGGGGAGTG i chlSab2.chr20 T 145 C 0 s calJac3.chr7 64617200 15 + 155834243 gTGTTGAGGGGAGGG- i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e rheMac3.chr1 33366549 128 + 229590362 T a score=208424.000000 s hg38.chr1_KI270760v1_alt 46166 121 + 109528 AGGTGACCTGGGGGTGGAGGGGGAGTGAGGTGACCTGGGG-TTGGAGGGGG--------------------------CTGAGGTGACCTGGGGATTGAAGGAGAGTGAGGTGACCTGGGGGTGGAGGGGGAGTGAGGTGACCTGGGGG s panTro4.chr1 30482003 94 + 228333871 aggtgacctgggggtggagggggg------------------------------------------------------tgaggtgacctggggattgaaggagagtgaggtgACCTGGGGGTGGAGGGGGAGTGAGGTGACCTGCGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070578 147 - 229942017 aggtaacctgggggtggagggggagtgaggtgacctgggg-gtggaggggggtgaggtgacctgggattgaaggagagtgaggtgacctgggggtggagggggagtgaggtgacctgggggtggagggggagtgaagtgacctggggg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366421 122 + 229590362 aggtgacctgagggtggagggggagtgaggtgacctgaGG-GTGGAGGGGG-------------------------AGTGAGGTGACCCTGAGGTTGAGGGGGAGTGAGGTGACCTGGGGGTGGAGGGAGAGTGAGGTGACCTGGGGG i rheMac3.chr1 T 128 I 6 s macFas5.chr1 29877753 122 - 227556264 AGGTGACCCTGAGGTTGAGGGGGAGTGAGGTGACCTGGGG-GTGGAGGGAG-------------------------AGTGAGGTGACCCTGAGGTTGAGGGGGAGTGAGGTGACCTGGGGGTGGAGGGGGAGTGAGGTGACCTGGGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641402 119 + 220367699 aggtgacctgagggtggagggggagtgaggtgaccttgag-gttgaggggg-------------------------agtgaggtgacctgggggttga---ggagtgaggtgacctgggggtgaagagggagtgaggtgacctggggg i papAnu2.chr1 I 27 C 0 s chlSab2.chr20 28157456 123 - 130588469 AGGTGACCTGAGGGTGGAGGGGGAGTGAGGTGACCTTGGGTGTTGAGGGGG-------------------------AGTGAGGTGACCTGGGGGTGGAGGGAGAGTGAGGTGACCTGGGGGTGGAGAGGGAGTGAGGTGACCTGGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64617215 117 + 155834243 AGGTGACCTAAGTGTtga-ggggagggaggtgacctgagt-gttgagagga--------------------------gggaggtgacctgagtattaaggggaag-gaggtgacctgaggttgga--gggagggaggtgacttgagtg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I a score=10117.000000 s hg38.chr1_KI270760v1_alt 46287 6 + 109528 TTGGGG s panTro4.chr1 30482097 6 + 228333871 TTGGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070725 6 - 229942017 ttgggg i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29877875 6 - 227556264 TTGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641521 6 + 220367699 ttgggg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157579 6 - 130588469 TTGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64617332 6 + 155834243 ttgagg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e rheMac3.chr1 33366543 6 + 229590362 I a score=1279.000000 s hg38.chr1_KI270760v1_alt 46293 2 + 109528 GT s panTro4.chr1 30482103 2 + 228333871 GT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070731 2 - 229942017 gg i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29877881 2 - 227556264 GG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641527 2 + 220367699 gg i papAnu2.chr1 C 0 C 0 s calJac3.chr7 64617338 2 + 155834243 gg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e chlSab2.chr20 28157585 0 - 130588469 C e rheMac3.chr1 33366543 6 + 229590362 I a score=3096.000000 s hg38.chr1_KI270760v1_alt 46295 3 + 109528 AGT s panTro4.chr1 30482105 3 + 228333871 AGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070733 3 - 229942017 agt i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29877883 3 - 227556264 AGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641529 3 + 220367699 agg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157585 3 - 130588469 AGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64617340 3 + 155834243 agg i calJac3.chr7 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e rheMac3.chr1 33366543 6 + 229590362 I a score=145857.000000 s hg38.chr1_KI270760v1_alt 46298 66 + 109528 GAGGTGGCCTGAGAATTGAGTGGAGAGTGAGTTAATCTGAGGGTGGTGGGAGAGTGAGGTGACCTG s panTro4.chr1 30482108 66 + 228333871 GAGGTGGCCTGAGAATTGAGTGGAGAGTGAGTTAATCTGAGGGTGGTGGGAGAGTGAGGTGACCTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070736 66 - 229942017 gaggtggcgtgagaattgagtggagAGTGAGTTAACCCGAGGATGGTGGGAGAGTGAGGTGACCTG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366549 66 + 229590362 GAGGTGGCCTGAGAATTGAGTGGAGAGTGAGTTAACCTGAGGGTGGTGGGAGAGAGAGGTGACCTG i rheMac3.chr1 I 6 C 0 s macFas5.chr1 29877886 66 - 227556264 GAGGTGGCCTGAGAATTGAGTGGAGAGTGAGTTAACCTGAGGGTGGTGGGAGAGAGAGGTGACCTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641532 66 + 220367699 gaggtggCCTGAGAATTGAGTGGAGAGTGAGTTAACCTGAGGGTGGTGGGAGAGAGAGGTGACCTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157588 66 - 130588469 GAGGTGGCCTGAGAATTGAGTGGAGAGTGAGTTAACCTGAGGGTGGTGGGAGAGAGAGGTGATCTG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64617343 63 + 155834243 gaggtgacctgagtgttga--ggggagggaggtgacgtgagtgttgaggg-gagggaggtgaCCTG i calJac3.chr7 C 0 I 4234 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I a score=80552.000000 s hg38.chr1_KI270760v1_alt 46364 44 + 109528 TAGCTTTGTCTTG----------------------------GGAGTAAGGAGTCCTAAAGTTTGAGGTGTAA s panTro4.chr1 30482174 44 + 228333871 TAGCTTTGTCTTG----------------------------GGAGTAAGGAGTCCTAAAGTTTGAGGTGTAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070802 44 - 229942017 TAGCTTTGTCTTG----------------------------GGAGTAAGGAGTCCTGAAGTTTGAGGTGTAA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366615 72 + 229590362 TAGCTTTGTCTTGGGAATGAGGTGACCTGAGGTTTGACTGTGGAGTAAGATGTCCTGAAGTTTGAGGTGGAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29877952 72 - 227556264 TAGCTTTGTCTTGGGAATGAGGTGACCTGAGGTTTGACTGTGGAGTAAGATGTCCTGAAGTTTGAGGTGGAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641598 72 + 220367699 TAGCTTTGTCTTGGGAATGAGGTGACCTGAGGTTTGACTGTGGAGTAAGGTGTCCTGAAGTTTGAGGTGGAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157654 72 - 130588469 TAGCTTTGTCTTGGGAATGAGGTGACCTGAGGTTTGAGTGTGGAGTAAGGTGTCCTGAAGTTTGAGGTGGAA i chlSab2.chr20 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 485326 1680 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e calJac3.chr7 64617406 4234 + 155834243 I a score=269865.000000 s hg38.chr1_KI270760v1_alt 46408 133 + 109528 AGGACAGGACAGCTATTGGGACCACCTCTCAAGACCCCATTACAGGT-TCTCACAGTTGCACCCAAGAGGTGTATTCGCTGTTCCTGACCACATTTTCTATCCTCCTGTCTTCAGAACGCCCTCCCTATGTGTC s panTro4.chr1 30482218 133 + 228333871 AGGACAGGACAGCTATTGGGACCACCTCTCAAGACCCCATTACAGGT-TCTCACAGTTGCACCCAAGAGGTGTATTCGCTGTTCCTGACCACATTTTCCATCCTGCTGTCTTCAGAACACCCTCCCTATGTGTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070846 133 - 229942017 AGGACAGGACAGCCAGTGGGACCACCTCTCAAGACCCCATTACAGGT-TCTCACAGTTGCACCCAAGAGGTGTATTCGCTGTTCCTGACCACATTTTCCATCCTCCTGTCTTCAGAACACCCTCCCTATGTGTC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 487006 127 - 28733288 agtacaggatggctGCTGGG-------TTCGAGTCCCCATGACGCTTGTTTCACAATTGCACCCAAGTGGCTCTCTAGCTATTCCTGACCATGTCTTCCACCCTCCATCTTTCAGAATGACTCCCTTAGATGCC i nomLeu3.chr24 I 1680 I 745 s rheMac3.chr1 33366687 133 + 229590362 CAGACAAGACAGCTGTTGGGACCACCTCTCAAGACCCCTTTACAGGT-TCTCACAGTTATACTCAAGAGGTGTATTTGCTGTTCCTGACCACGTTTTCCATCCTCCGGTCTTCAGAACGCCCTCCCTATGTGTC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29878024 133 - 227556264 CAGACAAGACAGCTGTTGGGACCACCTCTCAAGACCCCTTTACAGGT-TCTCACAGTTATACTCAAGAGGTGTATTTGCTGTTCCTGACCACGTTTTCCATCCTCCGGTCTTCAGAACGCCCTCCCTATGTGTC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641670 133 + 220367699 CAGACAGGACAGCTGTTGGGACCACTTCTCAAGACCCCTTTACAGGT-TCTCACAGTTGCACTCAAGAGGTGTATTTGCTGTTCCTGACCACGTTTTCCATCCTCCGGTCTTCAGAACGCCCTCCCTATGTGTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157726 133 - 130588469 CAGACAGGACTGCTGTTGGGACCACCTCTCAAGACCCCTTTACAGGT-TCTCACAGTTGCACTCAAAAGGTGTATTCACTGTTCCTGACCACGTTTTCTATCCTCTGGTCTTCAGAACGCCCTCCCTATGTGTC i chlSab2.chr20 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e canFam3.chr2 14996243 170 - 85426708 I e calJac3.chr7 64617406 4234 + 155834243 I a score=43146.000000 s hg38.chr1_KI270760v1_alt 46541 22 + 109528 AGGGTTGGTGACTTTCTTCCTA s panTro4.chr1 30482351 22 + 228333871 AGGGTTGGTGACTTTCTTCCTA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30070979 22 - 229942017 AGGGTTGGTGATTTTCTTCCTA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366820 22 + 229590362 AGGGTTGGTGACTTTCTTCCTA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29878157 22 - 227556264 AGGGTTGGTGACTTTCTTCCTA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641803 22 + 220367699 AGGGTTGGTGACTTTCTTCCTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157859 22 - 130588469 AGGGTTGGTGACTTTCTTCCTA i chlSab2.chr20 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 487133 745 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e calJac3.chr7 64617406 4234 + 155834243 I a score=2341910.000000 s hg38.chr1_KI270760v1_alt 46563 1045 + 109528 TGGGGACCTTCT--TGGGTTGTCTTCCCTCTCCCACGCGCCACCTTTTGCAGTGGGCCCCACAGTCATTCTGAGCATCTCTGTGCATCGCAGCCACAGGTTGGAGTTTGGAATTCGAACTTTAACAGGTAAACTTTAACAGGTGCTCATGATAGAGCTCGCTTTTGTGCCTGGACATGAGGAGAAATCGGGTCTGCAGAGAGAGATGGGGGTGGGAGGGGGAAGTGGGAGAGTCAAGGAAAGAGAGAGGAATCCTGATGTGAGAGGACCCCAGTGCTGCTCACACCATAGCCTTCTCTGTTCTGGGCTCCACTTGCAGTCCTGCCTTTGGATTTGGTGAGGCCACCCGGGTCCGGAGTCCCACTCTGGTATAGGTTAGCTGGAGTGGATCTCTAAGGCCTGGCACAAAGGGAACTCCACTGACCGTGACTtcccaccccatctttcaggtcccatcgcagctgctgcagcctcctggggcccacctcgacctttcacccattgggcctctccagccacctctgaactcaacaccttgaacctttcctaccatcctgg--------------------------------------------------------------------tgtgaaatcatggttatttgtccacgtatctcctcattcccagcagattgtgtcctcccgagggtaatgaattctgcttgctcatttctgcatcaaaccccagccccttgcagtacagcaggccctcagtgagggttcagtGCACCCACAGTTAATCCTAATTAACTGAGCACTGGACCCTGCCAGGCATTTGCATTCCACTCCCTTGTTGTCTCTTGATCCTCTTCAGCACTCTATTGTTGgaacactcactctcaagtccaaggccccaggttcaaatctcaggccagccactgacaagcttgagaaaggtatcaaacctctctggcctcagtttcctgatccataaaatggaggcaataatactgcctacctgatcacattgttggaggattagatggattacatagaccaagggtattagcaccatacctggagcgctatgatgatcatataaatgCAACCTCCACTTGCtccctcttccactggt s panTro4.chr1 30482373 1047 + 228333871 TGGGGACCTTCTCTTGGGTTGTCTTCCCTCTCCCACGCGCCACCTTTTGCAATGGGCCCCACAGTCATTCTGAGCATCTCTGTGCATCGCAGCCACAGGTTGGAGTTTGGAATTCGAACTTTAACAGGTAAACTTTAACAGGTGCCCATGATAGAGCTCGCTTTtgtgcctggacatgaggagaaatcgggtctgcagagagagatgggggtgggagggggaagtgggagagtcaaggaaagagagaggaatcctgatgcgagaggaccccagtgctgctcacaccatagccttctctgttctgggctccacttgcaatcctgcctttggatttggtgaggccacccgggtcctgagtcccactctggtataggttagctggagtggatctctAAGGCCTGGCACAAAGGGAACTCCACTGACCGTGACTtcccaccccatctttcaggtcccatcgcagctgctgcagcctcctggggcccacctcgacctttcacccattgggcctctccagccacctctgaactcaacacctcgaacctttcctaccatcctgg--------------------------------------------------------------------tgtgaaatcatggttatttgtccacatatctcctcattcccaccagattgtgtcctcccgagggtaatgaattctgcttgctcatttctgcatcaaaccccagccccttgcagtacagcaggccctcagtgagggttcagtGCACCCACAGTTAATCCTAATTAACTGAGCACTGGACCCTGCCAGCCATTTGCATTCCACTCCCTTGTTATCTCTTGATCCTCTTCAGCACTCTATTGTTGgaacactcactctcaagtccaaggccctacgttcaaatctcaggccagccactgacaagcttgagaaaggtatcaaacctctctggcctcagtttcctgatccataaaatggaggcaataatactgcctacctgatcacattgttggaggattagatggattacatagaccaaggatattagcaccatacctggagcgctatgatgatcatataaatgCAACCTCCACTTGCTCCCTCTTCCACTGGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30071001 1044 - 229942017 TGGGGACCTTCT--TGGGTTGTCTTCCCTCTCCCACGCGCCACCTTTTGCAGCGGGCCCGACAGCCATTCTGAGCATCTCTATGCATCGCAGCCACAGGCTGGAGTTTGGAATTCGACCTTTAACAGGTAAACTTTAACAGGTGCCTATGATAGAGCTCGCTTTTGTGCCTGGACATGAGGAGAAATCGGGTCTGCAGAGAGAGATGGGGGTAGGAGGGGGAAGCGGGAGAGGCAAGGGAAGAGAGAGGAATCCTGATGTGAGAGGACCCCAGTGCTGCTCACACCATAGCCTTCTCTGTTCTGGGCTCCAGTTGCAATCCTGCCCTTGGATTTTGTGAGGCCACCCAGGTCCTGAGTCCCACTCTGGTATAGGTTAGCTGGAGTGGATCTCTAAGGCCTGGCACAAAGGGAACTCCActgaccatgacttcccaccccatctttcaggtcccatcgcagctgctgcagcctcctggggcccaccttgacctttcaccaattgggcctctccagccacctctgaactcaacacttcgaacctttcctaccatcctgg--------------------------------------------------------------------tgtgaaaccatggttatttgtccacgtatctcctcattcccaccagattgtgtcctcccgagggtaatgaattctacttgctcatttctgcatcaaaccccagccccttgcagtacagcaggccctcagtgagggttcaatGCACCCACAGTTAATCCTAATTAACTGAGCACTGGACCCTGCCAGGCATTTGCATTCTACTCCCTTGTTGTCTCTTGATCCTCTTGAGCACTCTATTGTTGgaacactcactc-caagtccaaggccctagcttcaaatctcaggccagccactgacaagcttgagaaaggtatcaaacctctctggcctcagtttcctgatctataaaatggaggcaataatactgcccacctgatcacagtgttggaggattagatggattacatagaccaagggtactagcaccatacctggtgcactatgatgatcatataaatgCAACCTCCACTTGCtccctcttccactggt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33366842 1107 + 229590362 TGGGGGCCTTCT--TGGGTTGTCTTCCCTCTCCCATGTGCCACCTTTTGCAGTGGACCCCACAGTCA-TCTGAGCATCTCCCTGCATTGCAGCCACAGGTTGGAGTTTGGAATTCGACCTTTAACAGGTAAACTTTAAC-GGTGCCTATGATAGAGCTCGCTCTtgtgcctggacacgaggagaaatcgggtctgcagagaaagatgggggtgggagggggaagtgggacaggcaagggaagagagaggaatcctgatgtgagaggaccccagtgctgctcacaccatagccttctctgttctgggctccaatcgcaatcctgcccttggatttggtgaggctgcctgggtcccgagtcccactctgttgtaggttagctggagtggatctctaaggcctgacacaaagggagcGTCACTGACTGTGATTTCCCACCCCCTCTTTCAGGGCCCATCGCAGCTGCTGCAGCCTCCTGGGGTCCACCTTGACCTTTCCCCCAGTGGGCCTCTCCAGCCACCTCTGAACTCAACACCTCGAACCTTTCCTACCATCCTCGTGTGAAATCATGGTTATTTGTCCACATATCTTCTCATTCCCACCACATTGTGTCCTTCCATATCCTCATGTGAAatcatggttatttgtccacgtatctcctcattcccaccacattgtgtccttccaagggtaacgaattctgcttgctcatttctgcctcaaaccccagccccttgcagtacagcaggcactccgtgagggttCAGTGCACCCACAGTTAATCTTAATTAACTGAGCACTGGATCCTGCCAGGCATTTGCCTTCCAGCCCCTTGTTGTCTCTCGATCCTCTTGAGCATTCTGTTGTTGgaacactcactctcaagtccaaggccctaggttcaaatctcaggccagccactgacaaacttgagaaagctatcaaacctctctggtctcagtttcctgatctataaaatggaggcaataatactg----cctgatcacattgtgggaggattagatggattaaatagaccaagggaattagcaccataactggcgtgctatgattatcatataaatgcaacctccactTGCTCTCTCCTCCGCTGGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29878179 1039 - 227556264 TGGGGGCCTTCT--TGGGTTGTCTTCCCTCTCCCATGTGCCACCTTTTGCAGTGGACCCCACAGTCA-TCTGAGCATCTCCCTGCATTGCAGCCACAGGTTGGAGTTTGGAATTCGACCTTTAACAGGTAAACTTTAAC-GGTGCCTATGATAGAGCTCGCTCTtgtgcctggacacgaggagaaatcgggtctgcagagaaagatgggggtgggagggggaagcgggacaggcaagggaagagagaggaatcctgatgtgagaggaccccagtgctgctcacaccatagccttctctgttctgggctccaatcgcaatcctgcccttggatttggtgaggctgcctgggtcccgagtcccactctgttgtaggttagctggagtggatctctaaggcctgacacaaagggagcATCACTGACTGTGATTTCCCACCCCCTCTTTCAGGGCCCATCGCAGCTGCTGCAGCCTCCTGGGGTCCACCTTGACCTTTCCCCCAGTGGGCCTCTCCAGCCACCTCTGAACTCAACACCTCGAACCTTTCCTACCATCCTCG--------------------------------------------------------------------TGTGAAATCATGGTTATTTGTCCACGTATCTCCTCATTCCCACCACATTGTGTCCTTCCAAGGGTAACGAATTCTGCTTGCTCATTTCTGCCTCAAACCCCAGCCCCTTGCAGTACAGCAGGCACTCCGTGAGGGTTCAGTGCACCCACAGTTAATCTTAATTAACTGAGCACTGGATCCTGCCAGGCATTTGCCTTCCAGCCCCTTGTTGTCTCTCGATCCTCTTGAGCATTCTGTTGTTGgaacactcactctcaagtccaaggccctaggttcaaatctcaggccagccactgacaaacttgagaaagctatcaaacctctctggtctcagtttcctgatctataaaatggaggcaataatactg----cctgatcacattgtgggaggattagatggattaaatagaccaagggaattagcaccataactggcgtgctatgattatcatataaatgcaacctccactTGCtctctcctccactggt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32641825 1040 + 220367699 TGGGGGCCTTCT--TGAGTTGTCTTCCCTCTCCCACGGGCCACCTTTTGCAGTGGACCCCACAGCCATTCTGAGCATCTCCCTGCATTGCAGCCACAGGTTGGAGTTTGGAATTCGACCTTTAACAGGTAAACTTTAAC-GGTGCCTATGATAGAGCTCACTCTTGTGCCTGGACACGAGGAGAAATCGGGTCTGCAGAGaaagatgggggtgggagggggaagcGGGACAGgcaagggaagagagaggaatcCTGATGTGAGAGGACCCCAGTGCTGCTCACACCATAGCCTTCACTGTTCTGGGCTCCAATCACAATCCTGCCCTTGGATTTGGTGAGGCCGCCTGGGTCCTGAGTCCCACTCTGTTGTAGGTTAGCTGGAGTGGATCTCTAAGGCCTGACACAAAGGGAGCGTCACTGACTGTGATTTCCCACCCCCTCTTTCAGGGCCCATCgcagctgctgcagcctcctggggcCCACCTTGACCTTTCCCCCAGTGGGCCTCTCCAGCCACCTCTGAACTCAACACCTCGAACCTTTCCTGCCATCCTCC--------------------------------------------------------------------TGTGAAATCATGGTTATTTGTCCATGTATCTCCTCATTCCCATCAGATTGTGTCCTTCCAAGGGTAACGAATTCTGCTTGCTCATTTCTGCATCAAACCCCAGCGCCTTGCAGTACAGCAGGCGCTCCGTGAGGGTTCAGCGCACCCACAGTTAATCTGAATTAACTGAGCACTGGATCCTGCCAAGCATTTGCCTTCCAGCCCCTTGTTGTCTCTCGATCCTCTTGAGTATTCTGTTGTTGGAACACTCACTCTCAAGTCCAAGGCCCTAGGTTCAAATCTCAGGCCAGTCACTGACAAGCTTGAGAAAGCTATCaaacctctctggcctcagtttcctgatctataaaatggaggcaataataCTG----CCTGATCACATTGTTGGAGGATTAGATGGGTTAAATAGACCAAGGGAATGAGCACCATAACTGGCATGCTATGATTATCATATAAATGCAACCTCCACTTGCTCCCTCCTCCACTGGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28157881 1022 - 130588469 TGGGGGCCTTCT--TGGGTTGTCTTCCCTCTC----------CCTTTTGCAGTGGACCCCACAGCCATTCTGAGCATCTCCCTGCATTGCAGCCACAGGTTGGAGTTTGGAATTCGACCTTTAACAGGTAAACTTTAAC-GGTGCCTATGATAGAGCTCGCTCTTGTGCCTGGACACTAGGAGAAATCGGGTTTGCAGAGAAAGATGGGGGTGGGAGGGGGAAGCAGGACAGGCAAGGGAAGAGAGAGGAATCCTGATGTGAGAGGACCCCAGTGCTGCTCACACCATTGCCTTCTTTGTTCTGGGCTCCAATTGCAATCCTACCCTTGGATTTGGTGAGGCTGCCTGGGTCCTGAGTCCCACTCTGTTATAGGTTAGCTGGAGCGGATCTCTAAGGCCTGACACAAAGGGAGCACCACTGACTGTGATTtcccacccc--ctttcagggcccatcacagctgctgcagcctcctggggcccaccttgacctttcccccagtgggcctctccagccacctctgaactcaacacctcgaacctttcctgccatcctcg--------------------------------------------------------------------tgtgaaatcatggttattt------gtatctcctcattcccaccagattgtgtccttccaagggtaacgaattctgcttgctcatttctgcatcaaaccccagccccttgcagtacagcaggcactctgtgagggttcagCGCACCCACAGTTAATCTTCATTAACTGAGCACTGGATCCTGCCAGGCATTTGCCTTCCAGCCCCTTGTTGTCTCTCGATCCTCTTGAGCATTCTGTTGTTGgaacattcactctcaagtccaaggccctaggttcaaatctcaggccagccactgacaagcttgagaaagctatcaaacctctctggcctcagtttcctgatctataaaatagaggcaataatactg----cctgatcccattgttggaggattagatggattaaatagaccaagggaatgagcaccataactggcgtgctatgattatcacataaatgcaacctccactTGCtccctcctccactggt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64621640 1029 + 155834243 TGGGG--CCTCT--CAGGCTGCCTTCTGTCTCCCACATGCCACCTTTCACATTGAACCCCACAGCCATTCTGATCATCTCCCTGCATTCCAGCCACAGGCTGGAGTTTGGAATTGGATGTTCAGCAGGTAAACTTTAACATGTGCCTATAGTAGAGCTCACTCTTGTGCCTGGGCAGAAGGAGAATTCGGGTCTGCagagagagg-gagggtgggagagggtagcaggacaggca----gagagagaggaaTCCTGCTGTGGGAGGACCCCAGCCCAGCTCATGCTGTAGCCGTCTCTGTTCTGAGCTCC---TGCAGTCCTGCCCTTGGATTTGGTGGGGCCACCTGGGTCCTGAGTCCCACTCTGGTGTACATTAGCTAGAGTGTATCTCTAAGGCCTGGCACAAAGGGAGCTTCACTGAACGTGACTTCCCACCCCGTCTTCCAGGGCCCATTGCAGCTGCTACAGCCTCCTGGAGCCCACCTTGACTTTTCACCCAGTGGGGCTCTCCAGCCACCTCTGAACCCAACACCTTGAACCTTTCCTACCATCGCCG--------------------------------------------------------------------TGTGACATGGTGGTTATTTGTCCACGTAGCGCCTCATTTCCACCAGATGCTGTCCTCCCAAGGGTAACAAATTCTGCTTGCTCATTTCTGCATCAAACCCCAGCCCGCTGTGGTACAGCAGGCGCTCAGTGAGGCTTCAGTGCACCCGCAGTTAATCCTAATTAACGGAGCCCT-GACCCTGCCCGGCATTTGCATTTCGCCCCCTTGTTGTCTCTTGATCCTCTTGAGCACTCTGGggttggagcactcactctcaagtccaaagccctaggttcaaatctcaggccc-tcactgacaagcttgagaaaggtatcaaaactctctggcctcagtttcctgatctataaaatggaggcaataataccgcctacctgatcacattgctggagga-tagatggattaaataaactaggg--attagcactgcacctgatgcaatatgatcatcata-aaatgcagcccCCACTTGCTCCCTCCTCCACTGGA i calJac3.chr7 I 4234 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 487133 745 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I a score=150315.000000 s hg38.chr1_KI270760v1_alt 47608 86 + 109528 aacagctcctctcgtttttatgaggacccactaccatcctttcccagaacaactgttatttcagtgttattggtcccaccctcagt s panTro4.chr1 30483420 86 + 228333871 AACAGCTCCTCTCGTTTTTATGAGGACCCACTACCATCCTTTCCCAGAACAATTGTTATTTCAGTGTTATTGGTCCCACCCTCAGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30072045 85 - 229942017 aacaactcctcccatttttatgaggacccactaccatcctttcccagaacaattgttatttcagtgttattggtccca-cctcagt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33367949 86 + 229590362 AACAGCTCCTCCCATTTTTATATGGACCCACTACCATCCTTCCCCAGACCAATTGTTATTTCAGTGTGACTGGTCCCACCCTCAGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29879218 86 - 227556264 aacagctcctcccatttttatatggacccactaccattcttccccagaccaattgttatttcagtgtgactggtcccaccctcagt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32642865 86 + 220367699 AACAGCTCCTCCCATTTTTATATGAACCCACTACCATCCTTCCCCAGACCAATTGTTATTTCAGTGTGATTGGTCCCACTCTCAGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28158903 86 - 130588469 aacagctcctcccatttttatatggacccactaccatccttccccagaccaattgttatttcagtgtgattggtcccaccctcagt i chlSab2.chr20 C 0 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 487133 745 - 28733288 I e canFam3.chr2 14996243 170 - 85426708 I e calJac3.chr7 64622669 0 + 155834243 C a score=17857.000000 s hg38.chr1_KI270760v1_alt 47694 8 + 109528 ttcaagag s panTro4.chr1 30483506 8 + 228333871 ttcaagag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30072130 8 - 229942017 ttcaagac i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33368035 8 + 229590362 ttcaagag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29879304 8 - 227556264 ttcaagag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32642951 8 + 220367699 TTCAAGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28158989 8 - 130588469 ttcaagag i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14996413 8 - 85426708 ttcagggg i canFam3.chr2 I 170 C 0 e mm10.chr4 25417461 607 - 156508116 I e nomLeu3.chr24 487133 745 - 28733288 I e calJac3.chr7 64622669 0 + 155834243 C a score=364593.000000 s hg38.chr1_KI270760v1_alt 47702 173 + 109528 tgggcatataac-ctggc-ctggccagtgagactttattctgggattctcat-ggaattatggggcacgcaaagtgct--cttcttctgctgaagctactggg-gcctccaggaggagaggagctgcctggaagtaatgtccagtcagaggaaaacagaaccaagagataggat---------------------------------------------------------------------------gtgat s panTro4.chr1 30483514 174 + 228333871 tgggcatataac-ctggc-ctggccagtgagactttattctgggattctcattggaattacggggcacgcaaagtgct--cttcttctgctgaagctactggg-gcctccaggaggagaggagctgcctggaagtaatgtccgctcagaggaaaacagaaccaagagataggac---------------------------------------------------------------------------gtgat i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30072138 163 - 229942017 tgggcatataac-ctggc-ctggccaatgagactttattctgggattcttgttggaattatggg-----------gct--ctgcttctgctgaagctactggg-gcctccaggaggagaggagctgcctggaagtaatgtccactcagaggaaaacagaaccaagagataggat---------------------------------------------------------------------------gtgat i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 487878 168 - 28733288 taggcacgtgac-ttagcactaaccagtgaaattctattccaagactttt---ggaatcactggactagtgaagctctaccttctcctgcaatgtcta--gag-gccaccaggaagagcaggcctgcctggtagacaagtgag----gaggaaagcagagacaagttacagaca---------------------------------------------------------------------------gaggt i nomLeu3.chr24 I 745 C 0 s rheMac3.chr1 33368043 173 + 229590362 tgggcagataac-ctggc-ctggccaatgagactttattctgggatttttgtcggaattaaggggcaagcaaaatgct--cttcttctgctgaagctactggg-gcctccaggaggagaggagctgcct-gaagtgatgtccactcagaggaaagcagaaccaagagatagggt---------------------------------------------------------------------------gtgat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29879312 173 - 227556264 tgggcagataac-ctggc-ctggccaatgagactttattctgggatttttgtcggaattaaggggcaagcaaaatgct--cttcttctgctgaagctactggg-gcctccaggaggagaggagctgcct-gaagtgatgtccactcagaggaaagcagaaccaagagatagggt---------------------------------------------------------------------------gtgat i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32642959 173 + 220367699 TGGGCAGATAAC-CTGGC-CTGGCCAATGAGACTTTATTCTGGGATTTTTGTTGGAATTATGGGGCAAGCAAAATGCT--CTTCTTCTGCTGAAGCTACTGGG-GCCTCCAGGAGGAGAGGAGCTGCCT-GAAGTGATGTCCACTCAGAGGAAAGCAGAACTAAGAGATAGGGT---------------------------------------------------------------------------GTGAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28158997 173 - 130588469 tgggcagataac-ctggc-ctggccaatgagactttattctgggatttttgttggaattatggggcaagcaaaatgct--cttcttctgctgaagctactggg-gcctccaggaggagaggagctgcct-gaagtgatgtccactcagaggaaagcagaaccaagagatagggt---------------------------------------------------------------------------gtgat i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14996421 246 - 85426708 tgagcacatgactcaggc-caggtcagtgagacttcatcctgggactc-cattggaat-accggccaggcaaagtgtt--ctt-ttctgctgaagctgcggggagccttcc--aggagaagggctgcttggaagggaagctcactcagcggaaagcagcaccaagagatagggttataatcaatgcttgtcaacctcatgggacatctgggtggctcagcggttaaagcgtctgcctttggatcagggcatgat i canFam3.chr2 C 0 I 125 e mm10.chr4 25417461 607 - 156508116 I e calJac3.chr7 64622669 0 + 155834243 C a score=50559.000000 s hg38.chr1_KI270760v1_alt 47875 19 + 109528 ggatgcctgacaacctcac s panTro4.chr1 30483688 19 + 228333871 ggatgcctgacaacctcac i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30072301 19 - 229942017 gggtgcctgacaacctcac i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 488046 19 - 28733288 ggattcctgaagacctcat i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33368216 19 + 229590362 gggtgcctgacgacctcac i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29879485 19 - 227556264 gggtgcctgaagacctcac i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32643132 19 + 220367699 GGGTGCCTGACGACCTCAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28159170 19 - 130588469 gggtgcctgacgacctcac i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14996792 19 - 85426708 aaatgcttgccaacctcac i canFam3.chr2 I 125 C 0 e mm10.chr4 25417461 607 - 156508116 I e calJac3.chr7 64622669 0 + 155834243 C a score=2194914.000000 s hg38.chr1_KI270760v1_alt 47894 882 + 109528 ctgagcacttgaatccagccatacctg-aattcccttgaacttctcagtaacatgattctataaattttctgttctggcttaagccaatttgagtttctgtccttcgtcagagaaatgggccc---aattaaaacaATTATTGTACA--CATTTCCTCTACACTACCGAGaaataacttgcctgtagtcacacaccattcagttactgccca------gggattcaagcccagatccggctgcctctaatgataatggtc-tCGGGGAGTGCTTTAGGAG-TTG--GAGGCCGAGAGAGGTGAAGTGACAGACCCCGTTGAGGGTCAGGGA--AAGAGGAGCTCAAGATGCAATTTGCAGGGTCTGAAACCACTCGCTGTGGCAACCTAATTTGAGGTGGCCCATGTTATAGGCAATCTCCACAATTTCCTGGAATCCTCCCTGCTCAC-CTCCTAGAGCCAGTCT-------GACCATGACAGCTCCATTATCAGGCCTCGCAGGAC-TGACATATTGCTGCACCCAACTGCTAGAGCAGTCAAAGAGGCGGGGGGAGA--AGCAATTT-----CCCATCACTTCCTGGGGAACAGC--CTGTCAGCTGCCACCAGGGCTGTCTGGTGG------GGAGCAGGGGGT-CTGTGGGAGGCTAACGGCTCCACATAAGCCTTGA-CAAGT-ATCATTCCCCAGAGCAGCAGG--TGAGTCATGAATAGAGCTCCCAGCTGGAGA---AGTGGCCT--------CATCTCCACCAACTTCCTC----GGAGTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGACCTCCGGGTGCTATGGGATCCTCCTGCT---GTAACA-GCCA-----GAATCCACCAACAAAAGGCCCTTCTAGACCAATCTTTGCTCATGGACTGAGGCTTAAAGGTCAAGA--GAAAACAGA s panTro4.chr1 30483707 882 + 228333871 ctgagcacttgaatccagccatacctg-aattcccttgaacttctcagtaacatgaatctataaattctctgttctggcttaagccaatttgagtttctgtccttcgtcagagaaatgggccc---aattaaaacaATTATTGTACA--CATTTCCTCTACACTACCGAGaaataacttgcctgtagtcacacaccattcagttactgccca------gggattcaagcccagatccggccatctctaaTGATAATGGTC-TCGGGGAGTGCTTTAGGAG-TTG--GAGGCCGAGAGAGGTGAAGTGACAGACCCTGTTGAGGGTCAGGGA--AAGAGGAGCTCCAGATGCAATTTGCAGGGTCTGAAACCACTCGCTGTGGCAATCTAATTTGAGGTGGCCCATGTTATAGGCAATCTCCACAATTTCCTGGAATCCTCCCTGCTCAC-CTCCTAGAGCCAGTCT-------GACCATGACAGCTCCATTATCAGGCCTCGCAGGAC-TGAGATGTTGCTGCACCCAACTGCTAGAGCAATCAAAGAGACGGGGGGAGA--AGCAATTT-----CCCATCACTTCCTGGGGAACAGC--CCGTCAGCTGCCACCAGGGCTGTCTGGTGG------GGAGCAGGGGTT-CTGTGGGAGGCTAACGGCTCCACATAAGCCTTGA-CAAGT-ATCATTCCCCAGAGCAGCAGA--TGAGTCATGAATAGAGTTCCCAGCTGGAGA---AGTGGCCT--------CGTCTCCACCAACTTCCTC----GGGGTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGACCTCCGGGTGCTATGGGATCCTCCTGCT---GTAACA-GCCA-----GAATCCACCAACAAAAGGCCCTTCTAGACCAATCTTTGCTCATGGACTGAGGCTTAAAGGTCAAGA--GAAAACAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30072320 884 - 229942017 ctgagcacttgaatccagccatacctg-aattcccttgaacttctcagtgacatgaatctgtaaattccctgttctggcttaagccaatttgagtttctgtccctcatcagagaaatgggccc---aattaaaacaATTATTGTACCATCATTTCCTCTACACTACCGAGaagtaacttgcc-gtagtcacacaccaatcagttactgccca------gggattcaagcccagatccggccgtctctaaTGATAACGGTC-TTGGGGAGTGCTTTAGGAG-TTG--GAGGCCGAGAAAGGTGAAGTGACAGACCCTGTTGAGGGTCAGGGA--AAGAGGAGCTCAAGATGCAATTTGCAGGGTCTGAAACCACTCGCTGTGGCAATCTAATTTGAGGTGGCCCATGTTACAGGCAATCTCCACAATTTCCTGGAATCCTCCCTGCTTAC-CTCCTAGAGCCTGTCT-------GACCATGACAGCTCCATTATCAGGCCTCGCAGGAC-TGAGATGTTGCTGCACCCAACTGCTAGATCAATCAAAGAGGTCGGGGGAGA--AGTAATTT-----CCGCTCACTTCCCCGGGAACAGC--CCGTCAGCTGCCACCAGGGCTGTCTGCTGG------GGAGCAGGGGGT-CTGTGGGAGGCTAACAGCTCCAAATAAGCCTTGAGCAAGT-ATCATTCCCCAGAGCAGCAGG--TGAGTCGTGAATAGATTTCCCAGCTGGAGA---AGTGGCCT--------CGTCTCCACCAACTCCCTC----GGAGTTTGGTCTGAAATTTGTTTCAACAAGTGCAAGTGTGGGGAGACCTCCGGGTGCTATGGGATCCTCCTGCT---GTTACA-GCCA-----GAATCCACCAACAAAAGACCCTTCTAGACAAATCTTTGCTCATGGACCCAGGCTTAAAGGTCAAGA--GAAAACAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 488065 865 - 28733288 ctgagcacctggattcagccatacctgaaattcctctgcacattttactta---------ataagccTACAGTTCTGCT---------TCTGCATTTCTTTCCCTTATAATAAAAAGGATCCT---AATTGATACAGTTATCATCCC--CATAAATTAT-TGTTCCCATGAATTAACATATCGACCGTCACATACC---TGGTCAC-ACACA------GGCACGTAAGCTCAAATTCCGCTGTCTCTAATGGTGATGGTCTTTGAGGAAAACTCTAAGAG-CTAATAGGGTTCAAGGAAGCAATATAACAGACCCT------------------------GCTCCAGGTGCAATTTGTATAGTCTGAAATGACTCACTGAGGTAATCTAATTTGAGG-GGTCCAAATTGCAGGCAATCTCCACAGTTTCCTGGAATCCTCATTGCTCAC-CTCCCAGGGCCGGCCTGTCCCCAGACCATGACACTCCTGTTATCAGGCTTGGCAGGACACAAGCTGTTGCTGCAGATGCCTGGCCAAACAGGCAACAACGT---ATGAAA--GGTAATTTTCCTCCCTCTCTCTTCCTGGGGAGCAGC--CCCTCAGCTGCCATCAGAGCTGTTTGGTGG------GGAGCAGGGATT-CTCTGGGAAGCCTGCAACTCGA-ATGAACCTTGA-CAGGTAATCCTTCTCCAAGGCAGCGGG--AGAGTAGTGATTAGCACTGCCAGCTGGAGAAGCAGTGGCCTGGAGAAGAAGTCTCCACCTACTCCCTCGTGAGGATTCTGACCTGGAAATTGTTCAAACTAGTGCAGATGTGGGGAGGCCTCCAGGTACTGGGAGATCCTCCTGTG---ATTACA-GTCA-----GGATCCACCACCAAAAGGCCCTTCTAGATTGGTCTTTGCGCATGGATTGAGGGTAAAAGGTCAAGG--TGAAGCAGA i nomLeu3.chr24 C 0 I 884 s rheMac3.chr1 33368235 873 + 229590362 ctgagcacttgaatccagccatacctg-aattcccttgaacttctcagttacgtgaatctataaattccctgttctggcttaagccaatttgagtttctgtcctttgtcagagaaaTGGGCCCAATAATTTAAAAAATTATTGTACT--CATTTCCTCCACACTACCGAAaagtaacttgcccatagtcacacaccagtcagttactaccca------gggattcaagcccagatctagccgtttctaatgataatggtc-ttGGGAAGTGCTTTAGGAG-TTG--GAGGCTGAGAGAGGTGAAGTGACAGGCCCTGTTGAGGGTCATGGA--AAGAGGAGCTCAAGATGCAGTTTGCATGGTCTGAAACCACTCACTGTGGCAATCTCATCTGAGGTGGCCCATGTTGTAGGCAATCTCTACGATTTCCTGGAATCCTCCCTGCTCAC-CTCCTGGAGCCAGTCT-------GACGGTGACAGCTCCATTATCAGGCCTGGCGGGAC-TGAGATGTTGCTGCACCCAACTGCTAAATCAGTCAAAGAGGTAGGGGGAGA--AG-AATTT-----CCCCTCACTTCGCAGAGAGCAGC----------------CAGGGCTGTCTTGTGG------GGAACAGGGGGT-CTGTGGGAGGCAAACGGCTCCAAATGAGCCTTGA-CAGGT-ATTATTCCCCAGAGCAGCAGG--TGAGTCATGAATAGAGTTCCCAACTGGAGAAGAAGTGGCCT--------CGTCTCCACCAACTCCCTC----GGACTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGACCTCTGGGTGCTGTGGGATCCTCCTGCT---GTTACA-GCCA-----GAATCCACCAACAAAAGGCCCTTCTAGACCAATCTTTGCTCTTGGACCAAGGCTTAAAGGTCAAGA--GAAAGCAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29879504 874 - 227556264 ctgagcacttgaatccagccatacctg-aattcccttgaacttctcagttacgtgaatctataaattccctgttctggcttaagccaatttgagtttctgtcctttgtcagagaaaTGGGCCCAATAATTTAAAAAAGTATTGTACT--CATTTCCTCCACACTACCGAAaagtaacttgcccatagtcacacaccagtcagttactaccca------gggattcaagcccagatctagccgtttctaatgataatggtc-ttGGGAAGTGCTTTAGGAG-TTG--GAGGCTGAGAGAGGTGAAGTGACAGGCCCTGTTGAGGGTCATGGA--AAGAGGAGCTCAAGATGCAGTTTGCATGGTCTGAAACCACTCACTGTGGCAATCTCATCTGAGGTGGCCCATGTTGTAGGAAATCTCTACAATTTCCTGGAATCCTCCCTGCTCAC-CTCCTGGAGCCAGTCT-------GACGGTGACAGCTCCATTATCAGGCCTGGCGGGAC-TGAGATGTTGCTGCACCCAACTGCTAGATCAGTCAAAGAGGTAGGGGGAGA--AGTAATTT-----CCCCTCACTTCCCGGAGAGCAGC----------------CAGGGCTGTCTTGTGG------GGAACAGGGGGT-CTGTGGGAGGCAAACAGCTCCAAATGAGCCTTGA-CAGGT-ATCATTCCCCAGAGCAGCAGG--TGAGTCGTGAATAGAGTTCCCAACTGGAGAAGAAGTGGCCT--------CGTCTCCACCAACTCCCTC----GGACTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGACCTCTGGGTGCTGTGGGATCCTCCTGCT---GTTACA-GCCA-----GAATCCACCAACAAAAGGCCCTTCTAGACCAATCTTTGCTCTTGGACCAAGGCTTAAAGGTCAAGA--GAAAGCAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32643151 871 + 220367699 CTGAGCACTTGAATCCAGCCATACCTG-AATTCCCTTGAACTTCTCAGTTACGTGAATCTATAAATTCCCTGTTCTGGCTTAAGCCAATTTGAGTTTCTGTCCTTTGTCAGAGAAATGggccc---aattaaaaaaattattgtacc--CATTTCCTCCACACTACCAAAAAGTAACTTGCCCGTAGTCACACACCAGTCAGTTACTGCCCA------GGGATTCAAGCCCAGATCCAGCCATCTCTAATGATAATGGTC-TTGGGGAGTGCTTTAGGAA-TTG--GAGGCCGAGAGAGGTGAAGTGACAGGCCCTGTTGAGGGTCAGGGA--AAGAGGAGCTCAAGATGCAGTTTGCATGGTCTGAAACCACTCACTGTGGCAATCACATTTGAGGTGGCCCATGTTGTAGGCAATCTCCACAATTTCCTGGAATCCTCCCTGCTCAC-CTCTTGGAGCCAGTCT-------GACCATGACAGCTTCATTATCAGGCCTGGCAGGAC-TGAGATGTTGCTGCACCCAACTGCTAGATCAATCAAAGAGGTAGGGGGAGA--AGTAATTT-----CCCCTCACTTCCCGGAGAGCAGC----------------CAGGGCTGTCTTGTGG------GGAACAGGGGGT-CTGTGGCAGGCAAACGGCTCCAAATGAGCCTTGA-CAGGT-ATCATTCCCCAGAGCAGCAGG--TGAGTCGTGAATAGAGTTCCCAACTGGAGAAGAAGTGGCCT--------CGTCTCCACCAACTCCCTC----GGACTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGGCCTGCAGGTGCTGTGGGATCCTCCTGCT---GTTACA-GCCA-----GAATTCACCAACAAAAGGCCCTTCTAAACCAATCTTTGCTCTTGGACCGAGGCTCAAAGGTCAAGA--GAAAGCAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28159189 872 - 130588469 ctgagcacttgaatccagccatatctg-aattcccttgaacttctcagttacgtgaatctataaattccctgttctggcttaagccaatttgagttTCTGCCCTTTGTCAGAGAAATGGGCCC---AATTTAAAAAATTATTGTACC--CATTTCCTCCACACTACCGAAaagtaacttgctcgtagtcacacaccagtcagttactaccca------gggactcaagcccagatccagccgtctctaatgataatggtc-ttGGGAAATGCTTTAGGAGTTTG--GAGGCCGAGAGAGGTGAAGTGACAGGCCCTGTTGAGGGTCAGGGA--AAGAGGAGCTCAAGATGCAGTTTGCACAGTCTGAAACCACTCACTGTGGTAATCTCATTTGAGGTGGCCCATGTTGTAGGCAATCTCTACAATTTCCTGGAATCCTCCCTGCTCAC-CTCCTAGAGCCAGTCT-------GATGGTGACAGCTCCATTATCAGGCCTGGCGGGAC-TGAGATGTTGCTGCAGCCAATTGCTAGATCAGTCAAAGAGGTGGGGGGAGA--AGTAATTT-----CCCCTCACTTCCCGGAGAGCAGC----------------CAGGGCTGTCTTGTGG------GGAGCAGGGGGT-CTGTGGGAGGCAAACGGCTCCAAATGAGCCTTGA-CAGGT-ATCATTCCCCAGAGCAGCAGG--TGAGTCATGAATAGAGTTCCCAACTGGAGAAGAGGTGGCCT--------CGTCTCCACCAATTCCCTC----GGACTTTGGTCTGAAATTTGTTTGAACCAGTGCAAGTGTGGGGAGGCCTGCAGGTGCTGTGGGATCCTCCTGCT---ATTACA-GCCA-----GAATCTGCCAACAGAAGGCCCTTCTAGACCAATCTTTGCTCTTGGACCGAGGCTTAAAGGTCAAGA--GAGAGCAGA i chlSab2.chr20 C 0 C 0 s mm10.chr4 25418068 788 - 156508116 CTGAGTACCCTGTTCCAGCCATACTCC-AG-CCCCATGAACCTCCCA-TTCCAAGAGCTGGTAAGTTTTCTTTGCTG-------------------------CCTTATGACAGAAAGGAGCCC---AGCTAAAACTGTGACAGCTCC--CAGTG-----ACACAGTCATGACCTAGCATGTCTGTATTTATTCATTAGTCACTTGCCATCCA------AA-ACAGTAGCCCAGGTTTTGCTGTGTCTGAGG--AACAGTG-GCTGGGAGGACT-----GG-TGG--GAGGAGGGACGAG---------CAGGTTCTGCTGAGCACCGGGGGGTGGGGGGTGCTTACTGTGCAGCTGGCAGATCCTAAGATCACT------------CTAACTTGAGGTAAGTTTCATCAGAGGCAATTCCTGTGGCTTTCTGGAAAGCATACCGGTCACGCCCTCAGAGATCATCT-------GATGAAGATGGGTCTGTTATTAGACTCAGTAAGCT-AGAGATGACGCTGCACCCCACTACTAGATCAA------ATGTGAAGGGGG------TACTT-----CCCTTTGCTTCCTGGGGAGCAGCACCCCACAGCTGCCACCAGAACTGTCCTAAGG--------------------TATGGGA-GCCTGCAGCTC-AAATGAACCCTGA-CAATT-ATCA-CCCCCGGAACAGCAGGGAAGAGCAGCAGTGAGCAACCCCAGCTGGAGATGCAGAGACCT--------CGTGTCTGCCAGCACCCTG----GGACTCCAGCCTGGAAGGGGCTGGAACTTCCGAAAGCATGG--------------ATTATG-GATCTTTGTGTTTTAGTCTCA-GCCAGGCAGGGATCCA------------CCTTCTAGACCCTTCCTCAGTCATGGACAGAAAGTTAAAGGTTGAGATGGAAAGATGA i mm10.chr4 I 607 C 0 s canFam3.chr2 14996811 895 - 85426708 ctgagcacctggatccagccatacctt-aattcccttgaacttccctattacagaagcctgcaaattccctttcctggcttaagccaatttgaatgtct--cccttacaacagaaatgagccc---agttaaaacaATTAT----CC--CCATTGTACCACACTGCCATGCAATAACCTGCTGGCAATTGCACACTGGCCACTTACTGTCCAGTTACTGGGATTCAAGCCCAGATCCAGCTACCTATGATGGTGATGGTC-TTGGAGAAAACGTTAGGAG-TTG--GAGCCTAAGAGAAGCACAGTGACAGTCCCTGCTAAGGGTCAGGGG--AAGACGAGCTCAAAATGCAATTTGCAGGG-CTGAAATTGCTCACTGAGCCAATCTACTTTGAGATGGTCCACGTTGCAGACAATCTCTACAATTTCTTGGAATCCTTACTGCTCAC-CTC--AGGGCCAATCT-------GACCGTGACAGTTCCGTTATTAGATTTGGCAGGAC-TGTGATGCCACTGTGCCCACCTGCTAGATCCAACAAGGAAGTGGGGTGCGGGTAATAATTTCTCT-CCCCTCACTCCCAGGTGTGCAGC--TTTTCAGCTGCTATCAGGGCTGTCCAGTGGCAGGGGGGTGGGGGGGGTGCTCCGGGAGGCCAAGGGCTC-AAATGAACCTTGA-CAGGTAATCATGCCCCACAGCAGCAGG--TGAGCTGTGATTAGC-CTCTGGACTGGAGAAGGAAGCGCCT--------CGACTCCACCAACTCCCTA----GGACTCCAGCCTGGAAGTTGCTGGAACCAATGCAGATGAGGCGAGGCCTCCAAGTGCTGTGGGATCTTCTTTCT---GTCATAGGCCA-----GGATCCACCACCAAAAGACCCTTCTGGATTGATCTTTGTTCAGCAATTGAGGGTTAAAGGTCAAGG--TGAAGCAGA i canFam3.chr2 C 0 C 0 e calJac3.chr7 64622669 0 + 155834243 C a score=228875.000000 s hg38.chr1_KI270760v1_alt 48776 123 + 109528 tgtctctccttccacacagagtg----gagggcagggatcaagtccagctcattgtcaggtc-ccatggccaagtgcagtact---ggcacattgtaggggtctattattttatatatatat--ttaatcaat s panTro4.chr1 30484589 125 + 228333871 TGTCTCTCCTTCCACACAGAGTG----GAGGACAGGGATCAAGTCCAGCTCATTGTCAGGTC-CCATGGCCAAGTCCAGTACT---GGCACATTGTAGGGGTCtattattttatatatatatatttGATCAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073204 122 - 229942017 TGTCTCTCCTTCCACACAGAGTA----GAGGACAGGGAT-AAGTCCAGCTCATTGTCGGGTC-CCATGGCCAAGTGCAGTACT---GGCACATTGTAGGGGTCtattattttatatatatat--ttGATCAAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369108 125 + 229590362 TGTCTCTCCTTCCACACAGAGTG----GAGGGCGGGGATCAAATCTACTTCATTGTCTGGTC-CCATGGCCAAGTGCAGTACT---GGCACATTGGAGGGGtttattattttatatatatatatttGACCCGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880378 123 - 227556264 TGTCTCTCCTTC--CACAGAGTG----GAGGGTGGGGATCAAATCTACTTCATTGTCTGGTC-CCATGGCCAAGTGCAGTACT---GGCACATTGGAGGGGTTTATTATTTTATATATATATATTTGACCCGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644022 125 + 220367699 TGTCTCTCCTTCCACGCAGAGTG----GAGGGCGGGGATCAAGTCTAATTCACTGTCCGGTC-CCATGGCCAAGTGCAGTACT---GGCACATTGTAGgggtttattattttatacatatatatttgaccCGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160061 124 - 130588469 tgtctctccttccacacagagtg----gagggcggggatcaagtctaattcactgtccggtc-ccatggccaagtgcagtact---ggcacattgtaggggtttatt-ttatatatatatatatttaaCCCGA i chlSab2.chr20 C 0 C 0 s mm10.chr4 25418856 126 - 156508116 TGTCTTGCCTTCTACAGAGCGAC----ACCAGCAAGAAC-AAGGCTAACTTATGACTGGGGCACCATGGCCCAGTGGAAGCCCTAGGGCACATTGTGGGAACTTAGCACACACCAATCACCCATTTG--TTAG i mm10.chr4 C 0 C 0 s canFam3.chr2 14997706 126 - 85426708 tgtctctccttctagaccaagagcactgaggaaaggaatcaaatctcattcacattggatcc-ccaaagcctagcacagtgct---ggcacgttgtaggggttacatatttctcatgta---attggatCAAT i canFam3.chr2 C 0 I 251 e nomLeu3.chr24 488930 884 - 28733288 I e calJac3.chr7 64622669 0 + 155834243 C a score=484634.000000 s hg38.chr1_KI270760v1_alt 48899 238 + 109528 gaGGCCCTTAGAAATCATGGCCTCATTTTATGGTTAGGAAAAGTGAGTTTTACTGAAAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGCCACCAGTGAGTTGGTTCA-ATCTGAGGTTCCCTGAGGCTTCTTTCAACCCTGAATTGCTTTGATGATCacctgcccaagacacatggctgaggatgggcagagtcaggagagaaatctgagtcttctgaccacagactgcctgtt s panTro4.chr1 30484714 238 + 228333871 GAGGCCCTTAGAAATCATGGCCTCATTTTATGGTTAGGAAAAGTGAGTTTTACTGAAAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGCCACCAGTGAGTTGGTTCA-ATCTGAGGTTCCCTGAGGCTTCTTTCAACCCTGAATTGCTTTGATGATCacctgcccaagacacatggctgaggatgggcagagtcaggagagaaatctgagtcttctgaccacagactgcctgtt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073326 237 - 229942017 GAGGCCCTTAGAAATCATGGCCTCATTTTATGGTTAGGAAAAGTGAGTTTTACTGAAAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGCCACCAGTGAGTTGGTTCA-ATCTGAGGTTCCCTGAGGCTTCTTTCAACCCTGAATTGCTTTGATGATCacatgcccaagacacatggctgaggatgggcagagtcaggagagaaatctaagtcttctga-cACAGACTGCCTGTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369233 238 + 229590362 GAGGCCCTTAGAAATCATGGCCTCGTTTTATAGTTAGGAAAAGTGAATTTTACTGAGAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGTCACCAGTGAGTTGGTTCC-ATCTGAGGTTCTCTGAGACTTCTTTCAATCCTGAATTGCTTTGATGATCacatgcccaatacacatggctggggatgggcagagtcaggagagaaatctaagtcttctgaccacagactgcctgtt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880501 238 - 227556264 GAGGCCCTTAGAAATCATGGCCTCGTTTTATAATTAGGAAAAGTGAATTTTACTGAGAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGTCACCAGTGAGTTGGTTCC-ATCTGAGGTTCTCTGAGGCTTCTTTCAATCCTGAATTGCTTTGATGATCacatgcccaatacacatggctggggatgggcagagtcaggagagaaatctaagtcttctgaccacagactgcctgtt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644147 238 + 220367699 GAGGCCCTTAGAAATCATGGCCTCGTTTTACAGTTAGGAAACGTGAATTTTACTGAGAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGTCACCAGTGAGTTGGTTCA-ATCTGAGGTTCTCTGAGGCTTCTTTCAATCCTGAATTGCTTTGATGATCACATGCCCAAGACACATGGCTGGGGATGGGCAGAGTCAGGAGAGAAATCTAAGTCTTCTGACCACAGACTGCCTGTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160185 238 - 130588469 GAGGGCCTTAGAAATCATGGCCTCATTTTATAGTTAGGAAAAGTGAATTTTACTGAGAATGTGTTGCTCTTTTGCAGTCTGATCTTGGAGTAGTCACCAGTGAGTTGGTTCA-ATCTGAGGTTCTCTGAGGCTTCTTTCAATCCTGAACTGCTTTGATGATCacatgcccaagacatatggctggggatgggcagagtcaggagagaaatctaagtcttctgaccacagactgcctgtt i chlSab2.chr20 C 0 C 0 s mm10.chr4 25418982 230 - 156508116 GAAGTCGTTAGAAGTCACAGCCTTGTTTTTCAG-TAGAAGATCTGAGTTTTACCTCAAAC-TGTTTCTTGTTT-CCGTCTGATC----ATCAGCAAACGTGCACTTGGGTCAGGTGTGATCGTCTCAGAGGTTTCTTGGAACCTTAAACTGCTGTGGCACCCATGGGCCCAAG--ATGTGGCTGCAGATGGTCAGGCTCAGCACTAGAAGTATGGTCTTCTGGCCACAGGTGATCTGTC i mm10.chr4 C 0 I 252 e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I e calJac3.chr7 64622669 0 + 155834243 C a score=72143.000000 s hg38.chr1_KI270760v1_alt 49137 47 + 109528 tgccctcccacgccaagcagcgcctGGTCACTCACTGCCTTCACAGA s panTro4.chr1 30484952 47 + 228333871 cgccctcccacgccaagcagcgcctGGTCACTCACTGCCTTCACAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073563 43 - 229942017 CGCCGTCCCACGCCAAGCAGCGCCTGG----TCACTGCCTTCACAGA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369471 43 + 229590362 tgccttcccacaccaagcagggcctgg----tcactgccttcacaga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880739 43 - 227556264 tgccttcccacaccaagcAGGGCCTGG----TCACTGCCTTCACAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644385 43 + 220367699 TGCCTTCCCACACCAAGCAGCGCCTGG----TCACTGCCTTCACAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160423 43 - 130588469 tgccttcccacgccaagcagcgcctGG----TCACTGCTTTCGTGGA i chlSab2.chr20 C 0 C 0 e mm10.chr4 25419212 252 - 156508116 I e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I e calJac3.chr7 64622669 0 + 155834243 C a score=14294.000000 s hg38.chr1_KI270760v1_alt 49184 6 + 109528 GCTTAT s panTro4.chr1 30484999 6 + 228333871 GCTTAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073606 6 - 229942017 GCTTAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369514 6 + 229590362 gcttat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880782 6 - 227556264 GCTTAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644428 6 + 220367699 GCTTAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160466 6 - 130588469 GCTTAT i chlSab2.chr20 C 0 C 0 s mm10.chr4 25419464 6 - 156508116 GCATAT i mm10.chr4 I 252 C 0 e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I e calJac3.chr7 64622669 0 + 155834243 C a score=286326.000000 s hg38.chr1_KI270760v1_alt 49190 123 + 109528 AATTTACCCAAGAATTGTGCACACACAGTGTGATAGCCAGGACTTTTAGACTGCAAGTGACAGAAACATGATGTAAGCCAGGTAAGAAATGCAT-TGTCTCTTATAACCAATCCTGGGAAGGGC s panTro4.chr1 30485005 122 + 228333871 AATTTACCCAAGAATTGTGCACACACAGTG-GATAACCAGAACTTTTAGACTGCAAGTGACAGAAACATGATGTAAGCAAGGTAAGAAATGCAT-TGTCTCTTATAACCAATCCTGGGAAGGGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073612 123 - 229942017 AATTTACCCAAGAATTGTGCACACACAGTGTGATAGCCAGGACTTTTAGACTGCAAGTGACAGAAATATGATGTAAGCAAGGTAAGAAATGCAT-TGTCTCTTGTAAACAATCCTGGGAAGGGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369520 123 + 229590362 aatttaccgaagaaTTGTGCACACACAACATGAtagccaggactttcagactgcaagtgacagaaacatgatgtaagcaaagtaagaaattcat-tgtctcttttaacCAATCCTGGGAAGGAC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880788 123 - 227556264 AATTTACCGAAGAATTGTGCACACACAACATGAtagccaggactttcagactgcaagtgacagaaacatgatgtaagcaaagtaagaaattcat-tgtctcttttaacCAATCCTGGGAAGGAC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644434 121 + 220367699 AATTTACCCAAGAATTGTGCACACACAATATGATAGCCAGGACTTTCAgactgcaagtgacagaaacatGATGTAAGCAAAGTAAGAAATGCAT---TCTCTTTTAACCAGTCCTGGGAAGggc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160472 123 - 130588469 AATTTACCCAAGAACTGTGCACACACAACATGATAGCCAGGACTTTCAGACTGCCAGTGACAGAAACATGATGTAAGCAAAGTAAGAATTGTAT-TGTCTCTTTTAACCAATCCTGGGAAGAGC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64622669 121 + 155834243 AATTTACCCAAGAGCTGTGCACACGAAGTGCGATCGCCAGGATTTCTTGACTGCACGTGAC-GGAACATGATGTAAACAAAGTAAGAAATGCAC-TGTCTCCTGTCACCAGTCCTGGGAAGG-C i calJac3.chr7 C 0 C 0 s mm10.chr4 25419470 124 - 156508116 TGTTCAACTAAGAGTCACATATTCATGGCAGGACAGCCAAGACATTTTAGCTGTGAGTGACAGACATGTGATTTAAGAAAACAATTATCCACACCTGTCCAGTTTAACCCATCCAGGGAGGGGC i mm10.chr4 C 0 I 1725 e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I a score=2186758.000000 s hg38.chr1_KI270760v1_alt 49313 982 + 109528 TGtgtattagtctgtcctcacactgctgataaagacatacctgagactgagtaatttacaaagaaaaagaggtttaatggactcacagttccacatggctggggaggcctcacaatcatgggggaagacaaaggaggagaaaggcgtgtcttacatggtggcaggcaaaagggcttgtgcaggggaactcccatttataaaaccaccagatctcatgagacttaatcactaccacaagaagagtattggggaaaccat-cacatgattgaattatctc-acctggccctgcccttgacatgtggggattattacaattcaaggtgagatttgggtggggacgtagccaagccat-atcaGGCTGGAACACTGGGtctctctct--------------------------------------ctctctctgtctctctctctgtctctctctctctctctctttctctcCccctccttc--------cctccatcccttcctccctccctcAAGTTTGCTTGCTTCCTCCTTCAGAAACAAATTGCCTCCTTAGTGTCCACTGCCTCCTCCTCTACCACAAATGGCATCTTCCACAGCTCAAGCTGAGAGCCACAGGTCATGAGCCATGGGTCATACCTCAGGGTCCTCCTTCCTGGAGTCACATCAGAGAGGTGGGAGCTGCCCACCCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGTCTCTCATGACCCTGTCCTGGAGGGTGAATGGCAGCTACCGCTAGGATCACATAGATGGAGTTTGGGGGGTCAGGAGAGGGGTTGGCATTGCCTCAAACAAGTGGCTTTTCCCAGAACTGATGGACTGCCTGGACGGACAGAGCAATAGGCATCCTCTGTGTTGGGGGAGACAATTGAAGAGTGGCCCTTGGCGATGCAATCTGAATGTGTGATGCAGCCCGTGGATTTGGAAGGAGGAGAGACATCTGGAGTCGTCCTCACTCCTTTGTTCCCTCCCAGGAG-TCCCATTTAATTCATCCTGTGAATCTCTT s panTro4.chr1 30485127 975 + 228333871 TGtatattagtctgtcctcacactgctgataaagacatacctgagactgagtaatttacaaagaaaaagaggtttaatggactcacagttccacatggctggggaggcctcacaatcatggcggaaggcaaaggaggagaaaggcgtgtcttacatggtggcagacaaaagggcttgtgcaggggaactcccatttataaaaccaccagctctcatgagacttaatcactaccacaagaacagtattgaggaaaccat-cacatgattgaattatctccacctggccctgcccttgacatgtggggattattacaattcaaggtgagatttgggtggggacatagccaagccat-atcaGGCTGGAACACTGGGtctctctct--------------------------------------ctctctctctctccccctct--------ctctctctctctttctctccccctccttc--------cctccatcccttcctccctccctcAAGTTTGCTTGCTTCCTCCTTCAGAAACAAATTGCCTCCTTAGTGTCCACTGCCTCCTCCTCTACCACAAATGGCATCTTCCACAGCTCAAGCTGAGAGCCACAGGTCATGAGCCATGGGTCGTACCTCAGGGTCCTCCTTCCTGGAGTCACATCAGAGAGGTGGGAGCTGCCCACCCCGGGTTCTGATGTGGAAGCTCCCAGGGAAGGTCTCTCATGACCCTGTCCTGGAGGGTGAATGACAGCTACCGCTAGGATCACATAGATGGAGTTTGGGGGGTCAGGAGAGGGGTTGGCATTGCCTCAAACAAGTGGCTTTTCCCAGAACTGATGGACCGCCTGGACGGACAGAGCAATAGGCATCCTCTGTGTTGGGCGAGACAATTGAAGAGTGGCCCTTGGCGATGCAATCTGAATGTGTGATGCAGCCCATGGATTTGGAAGGAGGAGAGACATCTGGAGTCGTCCTCACTCCTTTGTTCCCTCCCAGGAG-TCCCATTTAATTCATCCTGTGAATCTCTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30073735 960 - 229942017 TGtgtattagtctgtcctcacactactgataaagacatacctgagactgagtaatttacaaagaaaaagaggtttaatggactcacagttccacatggctggggaggcctcacaatcatggcgggaggcaaaggaggagaaaggcatgtcttacatggcggcaggcaaaagtgcttgtgcaggggaactcccatttataaaaccaccagatctcatgagacttaatcactaccacaagaacagtattggggaaaccac-cacatgattgaattatctccacctggccctgcccttgacatgtggggattattacaattcaaggtgagatttgggtggggacatagccaagccat-atcaGGCTGGAACACTGGGTCTTGctct--------------------------------------ctctctctctctccctctct--------ctctccttctct---cccctccttctgtc--------catccctccctccctccctccctcAAGTTTGCTTGCTTCCTCCTTCAGAAACAAATTGCCTCCTTAGTGTCCACTGCCTCCTCCTTTACCACAAATGGCATCTTCCACAGCTCAAGCTGAGAGCCAGAGGTCATGAGCCATGGGTCATACCTCAGGGTCCTCCTTCCTGGAGTCACATCAGAGAGGTGGGAGCTCTCCACCCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGTCTCTCATGAGCCTGTCCCGGAGGATGAATGGCAGCTACTGCTAGGATCACATAGATAGAGTTTGGGGGATA------------GGCATTGCCTCAAACAAGTGGCTTTTCCCAGAACTGATGGACTGCCTGGACAGACAGAGCAACAGGCATCCTCTGTGTTGGGCGAGACAATTGAAGAGTGGCCCTCGGAGATGCAATCTGAATGTGTGATGCAGCCCATGGATTTGGAAGGAGGAGAGACATCTGGAGTCATCCTTACTCCTTTGTTCCCTCCCAGGAG-TCCCATTTAATTCATCCTGTGAATCTCTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33369643 1009 + 229590362 TGtgtattagtctgttctcacactgctgataaagacatacctgagaccgggtaatttatagagaaaaagaggtttaatggactcacagttccacatgactgggaaggcctcacaatcatggcagaaggcaaaggaggagaaagacatgtcttacatggcggcaggcaaaagcgcttgtgcaggggaactgcccgttataaaaccatcagatctcataagactaattcactactacaagaacaatattggggaaaacacgcccatgattcaattatctccacctggccctgcccttgacctgtggggattattacaattcaaagtgagatttgtgtggggacatagtcaagccataATCAGGCTGGAACACTGGGtctctctctctctctctctctTATAATCAGGCTGGAACACTGGGtccctctctctctctctctctct--------ctctctctctcattctctccccctccatccctcacttcctccctccctccctccttccctcAAGTTTGCTTGCTTCCTCCTTCAGAAACAGACTGCCTCCTTAGTGTCCACTGCCTCCTCTTCTACCACAAATGGCATCTTCCACAGTTCAAGCTGAGAGCCACAGGTCATGAGCCATGGGTTATACCTCAGGGTCCCCCTTCCTGGAGTCACATCAGAGAGGTGGGCGCTCTCCACTCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGACTCTCGTGAGCCTGTCCTGGAGGGTGAATGGCAGCTGCCACTAAGATCACACAGATGGAGTTTGGGGGGTTGGGAG-GGGGCGGGCATTGCCTCAAACAAGTAGCTTTTCCCAGAACT-------------GATGGACAGAGCAATAGGCATCCTCTGTGGTGGGTGAGACAATTGAAGAGTGACCCTTGGCGATGCAATCTGAATGTGTGATGCAGGCCATGGATTTGGAAGGAGGAGAGACATCTGGAGTCGTCCTCACTCCTTTGTTTCCTCCCAGGAG-CCCCATTTAATTCATCCTGTGAATCTCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29880911 967 - 227556264 TGtgtattagtctgttctcacactgctgataaagacatacctgagaccgggtaatttatagagaaaaagaggtttaatggactcacagttccacatgactgggaaggcctcacaatcatggcagaaggcaaaggaggagaaagacgtgtcttacatggcggcaggcaaaagggcttgtgcaggggaactgcccgttataaaaccatcagatctcataagactaattcactactacaagaacaatattggggaaaacacgcccatgattcaattatctccacctggccctgcccttgacctgtggggattattacaattcaaagtgagatttgggtggggacatagtcaagccataATCAGGCTGGAACACTGGGtctct------------------------------------------ctctctctctctctctctct--------ctctctctctcATTCTCTCCccctccatccctcacttcctccctccctccctccttccctcaagtttgcttgcttcctccttcAGAAACAGACTGCCTCCTTAGTGTCCACTGCCTCCTCTTCTACCACAAATGGCATCTTCCACAGTTCAAGCTGAGAGCCACAGGTCATGAGCCATGGGTTATACCTCAGGGTCCCCCTTCCTGGAGTCACATCAGAGAGGTGGGCGCTCTCCACTCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGACTCTCATGAGCCTGTCCTGGAGGGTGAATGGCAGCTGCCACTAAGATCACACAGATGGAGTTTGGGGGGTTGGGAG-GGGGCGGGCATTGCCTCAAACAAGTAGCTTTTCCCAGAACT-------------GATGGACAGAGCAATAGGCATCCTCTGTGGTGGGTGAGACAATTGAAGAGTGACCCTTGGCGATGCAATCTGAATGTGTGATGCAGGCCATGGATTTGGAAGGACGAGAGACATCTGGAGTCGTCCTCACTCCTTTGTTTCCTCCCAGGAG-CCCCATTTAATTCATCCTGTGAATCTCTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32644555 983 + 220367699 tgtgtattagtctgttctcacactgctgataaagacatacctgagaccgggtaatttatagagaaaaagaggtttaatggactcacagttccacatgactgggaaggcctcacaatcatggcggaaggcaaaggaggagaaaggcgtgtcttacatggcggcaggcaaaagggcttgtgcaggggaactgcctgttataaaaccatcagatctcatgagactaatTCACTACTACAAGAACAATATTGGGGAAAacacacccatgattcaattacctccacctggccctgcccttgacctgtggggattattataattcaaagtgagatttgggtggggacatagccaagcCATAATCAGGCTGGAAcactgggtctctct----------------------------------------ctctctctctctctctctct--------ctctctctctcattctctccccctccatctctcacttcctccctccctccctccttccctcaagtttgcttgcttcctccttcAGAAACAGACTGCCTCCTTAGTGTCCACTGCCTCCTCCTCTACCACAAATGGCATCTTCCAcagttcaagctgagagccacaGGTCATGAGCCATGGGTTATACCTCAGGGTCCCCCTTCCTGGAGTCACATCAGAGAAGTGGGAGCTCTCCACTCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGACTCTCATGAGCCTGTCCTGGAGGGTGAATGGCAGCTGCCACTAGGATCACACAGATGGAGTTTGGGGGGTTGGGAG-GGGGCGGGCATTGCCTCAAACAAGTAGCTTTTCCCAGAACTGATAGACCGCCTGGATGGACAGAGCAATAGGCATCCTCTGTGGTGGGTGAGACAATTGAAGAGTGACCCTTGGCGATGCAATCTGAATGTGTGATGCAGGCCATGGATTTGGAAAGAGGAGAGACATCTGGAGTCGTCCTCAGTCCTTTGTTCCCTCCCAGGAGCCCCCATTTAATTCATCCTGTGaatctctt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28160595 976 - 130588469 TAtgtattagtctgttctcacactgctgataaagacatacctgagaccaggtaatttatagagaaaaagaggtttaatggactcacagttccacatggctggggaggcctcacaatcatggcggaaggcaaaggaggagaaaggtgcgtcttacatggcggcaggcaaaagggcttgtgcaggggaactgcccgttataaaaccatcagatctcatgagactaattcactaccacaagaacaatattggggaaaacacccccatgattcaattatctccacctgcccctgcccttgacctgtggggattattacaattcaaggtaagatttgggtggggacatagccaagccataATCAGGCTGGAACACTGGGt----------------------------------------------ctctctctctctctctctct--------ctctctctctcATTCTCTCCccctccatccctcacttcctccctccctccctccttccctcaagtttgcttgcttcctccttcAGAAACAGACTGCCTCCTTAGTGTCCACTGCCTCCTCCTCTACCACAAATGGCATCTTCCACAGTTCAAGCTGAGAGCCACAGGTCATGAGCCATGGGTTATACCTCAGGGTCCCCCTTCCTGGAGTCACATCAGAGAGGTGGGCGCTCTCCACTCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGCACTCTCATGAGCCTGTCCTGGAGGGTGAATGGCAGCTGCCACTAGGATCACACAGATGGAGTTTGGGGGGTTGGGAG-GGGGCGGGCATTGCCTCAAACAAGTAGCTTTTCCCAGAACTGATGGACCGCCTGGAGGGACAGAGCAATAGGCATCCTCTGTGGTGGGTGAGACAATTGAAGAGTGACCCTTGGCGATGCAATCGGAATATGTGATGCAGGCCATGGATTTGGAAGGAGGAGAGACATCTGGAGTCGTCCTCACTCCTTTGTTCCCTCCCAGGAG-CCCCATTTAATTCATCCTGTGAATCTCTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64622790 961 + 155834243 CGtgtattcgtctgttctcatgctgctaataaagacatacccaagactgggcaatttataaagaaaa--aggtttcatggact--cagctccacatggctggggaggcctcacaatcatggtgaaaggca---gaggagaaaggcatgttttacatggcagcagacaaaggggcttgtgcagggaaacccccatatataaaaccatctgatctcacaagacttattcacaaccacgagaacagtattgaggaaaccatccccatgattcagttatctccatctggccccacccttcacatgtgtggattattacaattcaaggtgagatttgggtggggacacagccaaaccat-atcaGGCTGGAACACTGGGtct--------------------------------------------ctctttctttctctctctct--------ctctctccctccctcccccttcccccatc--------cctctatccttccctccctccctcAAGTTTGCTTGCTTCCTCCTTTGGAAACAAACTGCCTCCTTTGTGTCAACTGCCTCCTCTTCTACCACAAACTGCCTCTTCCACAGCTCAAGCTAAGAGCCACAGGTCATGAACTATGGGTCATACCTCAGGGTCCCCCTTCCTGGAGTCACATTAGAGAGGTGGGAGCTCTCTGCCCTGGGTTCTGATGTGGAAGCTCCCAGGGAAGGACTCTCATGAGCCTGCCCTGGAAGGGGAATGGCAGCTACTGCTAGGATCACATAGATGGAGTGTGTGAGGTCAGGAGAGGGGTGGGCATTGCCTCAAACAAGTGGCTATTCCCAGAACTGATGGACAGCCTGGATGGACAGAGCAATAGGCATCCTC--TGGCAGGTGAGACAATTGAAGAGTGACCCTCAGCAATGCCATCTAAATATGTGGGGCAGACCATGGATGTGGAACGAGGAGAGGCTTCTGGAGTCGTCCTCACTTCTTTGTTCCCTCCTAGGAG-CTCCATTTAATTCATTCTGTGAATCTCTT i calJac3.chr7 C 0 C 0 e mm10.chr4 25419594 1725 - 156508116 I e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I a score=273109.000000 s hg38.chr1_KI270760v1_alt 50295 100 + 109528 TCTGCCTCTGCCCTGG-CTGGCCCCTGTGTAAGGGCAGGATAAGGTCTCTCCATGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG s panTro4.chr1 30486102 100 + 228333871 TCTGCCTCTGCCCTGG-CTGGCCCCTGTGTAAGGGCAGGATAATGTCTCTCCATGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30074695 100 - 229942017 TCTGCCTCTGCTCTGG-CTGGCCCCTGTGTAAGGGCAGGATAAGGTCTCTCCACGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33370652 100 + 229590362 TCTGCCTCTGCCCTGG-CTGGCCCCTCTGTAAGGGCAGGATAAGGTTTCTCCGTGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29881878 100 - 227556264 TCTGCCTCTGCCCTGG-CTGGCCCCTCTGTAAGGGCAGGATAAGGTTTCTCCGTGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645538 100 + 220367699 tctgcctctgcccTGG-CTGGCCCCTGTGTAAGGGCAGGATAAGGTTTCTCCATGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28161571 100 - 130588469 TCTGCCTCTGCCCTGG-CTGGCCCCTGTGTAAGGGCAGGATAAGGTTTCCCCGTGAAGGGGACCA-CAGTCCAGAGGGCAAAAGACCTGTCAGTCAATGGTG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64623751 100 + 155834243 TCTGCCTCTGCCCCGG-CTGGCTTCTGTGCAAGGGCTGGATAAGGTCTCTCCAGGAAGGGAACCA-CAGTCCAGAGGGCAAAAGACCTGCCAGTCAATGGTG i calJac3.chr7 C 0 C 0 s mm10.chr4 25421319 102 - 156508116 TCTGCTGCAGCCAGGGTCTGGGTCCTAGGAAAGGATCAAATGGGGTCTCTCCATGGAAGGGACAAGCAGGTCAGGCAGCAAATCTGGTAACAGCCAATGGTG i mm10.chr4 I 1725 C 0 e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14997832 251 - 85426708 I a score=329353.000000 s hg38.chr1_KI270760v1_alt 50395 133 + 109528 GGACAA-GGTGACCCATGGGTCATG-AAGGTCCATTAGAGACCTGCAGAGTGTAGCAGGGGGAGAGGTGGGGTGCTCCGAGG--AGCT-------GATGCTCTAG-CGAATCCTGGGGATGCTGCCTGGAGGAGGAGGTTCTGAG s panTro4.chr1 30486202 131 + 228333871 GGACAA-GGTGACCCACGGGTCATG-AAGGTCCATTAGAGGCCTGCAGAGTGTAGCAGGGGGAGAGGTGGG-TGCTCCGAG---AGCT-------GATGCTGTAG-CGAATCCTGGGGATGCTGCCTGGAGGAGGAGGTTCTGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30074795 133 - 229942017 GGACAA-GGTGACCCATCGGTCATG-AAGGCTCATTCGAGGCCTGCAGAGTGTAGCAGGGGGAGAGGTGGGGTGCTCCAAGG--AGCT-------GATGCTCTAG-CGAATCCTGGGGATGCTGCCTGGAGGAGGAGGTTCTGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33370752 133 + 229590362 GGACAA-GGTGACCCATGGGTCATG-AAGGTCCATTCGAGGCCTGCAGAGTGCAGCAGGGGGAGAGGTGGGGTGCTCCGAGG--AGCT-------GATGCTCTAG-CGAATCCTGGGGAGGTTGCCTGGGGGAGGGGGTTCTGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29881978 133 - 227556264 GGACAA-GGTGACCCATGGGTCATG-AAGGTCCATTCGAGGCCTGCAGAGTGCAGCAGGGGGAGAGGTGGGGTGCTCTGAGG--AGCT-------GATGCTCTAG-CGAATCCTGGGGAGGTTGCCTGGGGGAGGGGGTTCTGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645638 133 + 220367699 GGACAA-GGTGACCCATGGGTCATG-AAGGTCCATTCGAGGCCTGCAGAGTGCAGCAGGGGGAGAGGTGGGGTGCTCCGAGG--AGCT-------GATGCTCTAG-CGAATCCTGGGGAGGTTGCCTCGGGGAGGGGGTTCTGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28161671 133 - 130588469 GGACAA-GGTGACCCATGGGTCATG-AAGGTCCATTCGAGGCCTGCAGAGTGCAGCAGGGGGAGAGGTGGGGTGCTCCGAGG--AGCT-------GACGCTCTAG-CGAATCCTGGGGAGGTTGCCTGGGGGAGGGGATTCTGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64623851 119 + 155834243 GGACAA-GGTGACCCAT-GGTCGTGAAAGGCACATTCAAGGCCTGC--------------GGAGAGGTGGGGTGCTCCAAGG--ATCT-------GAAGCTCCAG-CTATTCCTGCGGAGGCTGCTTGGAGGAAAGGGTTCTGAG i calJac3.chr7 C 0 C 0 s mm10.chr4 25421421 133 - 156508116 GCACAGTGGAAGTTCATGGGTCTTG-GAGGCTC-TTGGAAGTTTGTGAAGATCAGCAGAAGAAAGGGTCTTAGATCCATAAG--GTCT-------GATGTGCTTT-TGAGTCTCGGGGAGACTAAATGCAGTTGTGTGTGTCTAG i mm10.chr4 C 0 I 110 s canFam3.chr2 14998083 139 - 85426708 GGAGAA-GGGGATGCATGAGCCTTG-GAGGCCCAGTCCAGGCCTTGGGAGTACAGTATAGAAAGGGGCCGCCTACTCCAGTGCAAGCTGGGGTGGGATGCTccagaagagtcctggggagacttcctggaggagg----tctaag i canFam3.chr2 I 251 C 0 e nomLeu3.chr24 488930 884 - 28733288 I a score=157850.000000 s hg38.chr1_KI270760v1_alt 50528 71 + 109528 GGGCACCCCTGAAGGAAGGGGA-TATTTGTGAATCAGAGAGAAGCAAGAAAAGCAAAAACATTCTAGGGGTG------------------- s panTro4.chr1 30486333 70 + 228333871 GGGCACCC-TGAAGGAAGGGGA-AATTTGTGAATCAGAGAGAAGCAAGAAAAGCAAAAACATTCTAGGGGTG------------------- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30074928 71 - 229942017 GGGCACCCCTGAAGGAAGGGGA-AATTTGTGAATCAGAGAGGAGCAAGAAAAGCAAAAACATTCTAGGGGTG------------------- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33370885 71 + 229590362 CTGCACTCCTGAAGGAATGGGA-AGTTTGTGAATCAAAGAGGAGCAAGAAAAGCAAAAATATTCTAGGGgtg------------------- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29882111 71 - 227556264 CTGCACTCCTGAAGGAATGGGA-AGTTTGTGAATCAAAGAGGAGCAAGAAAAGCAAAAATATTCTAGGGGTG------------------- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645771 71 + 220367699 CTGCACTCCTGAAGGAAGGGGA-AGTTTGTGAATCAAAGAGgagcaagaaaagcaaaaatattctaggggtg------------------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28161804 71 - 130588469 CCACACTCCTGAAGGAAGGGGA-AATTTGTGAATCAAAGAGGAGCAAGAAAAGCAAAAATATTCTAAGGGTG------------------- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64623970 71 + 155834243 CTGTGCACATGAAGGAAGGGGA-AATTTATGAATCAGAGAGGAGTAAGAAAAGCAAACACATTCCAGGGGTA------------------- i calJac3.chr7 C 0 C 0 s canFam3.chr2 14998222 84 - 85426708 ctgggatcctaaaggactgagagaacttggacaccagagaggaaggagaag-------gcattctagaggtaccagtgtatgtgcctggcg i canFam3.chr2 C 0 C 0 e mm10.chr4 25421554 110 - 156508116 I e nomLeu3.chr24 488930 884 - 28733288 I a score=131311.000000 s hg38.chr1_KI270760v1_alt 50599 73 + 109528 AGTGTGGCTGTATGTGCACATATGATTGCATGCA-----gtgtgtgtgtgtgtgtgtgtgtgt-gtgtgtgtgtgtgtg s panTro4.chr1 30486403 56 + 228333871 AGTGTGGGTGTATGTGCACATATGATTGCATGCA-----gtgtgtgtgtgtgtgtgtgtTT------------------ i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30074999 57 - 229942017 AGTGTGGGTGTGTGTGCACATATGATTGCATGCA-----gtgtgtgtgtgtgtgtgtgtgt-----------------g i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33370956 73 + 229590362 agtgtgggtgtgtgtgcacatgtgattgcatgct-----gtgtgtgtgtgtgtgtgtgtgtgt-gtgtgtgtgtgtgtg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29882182 73 - 227556264 AGTGTGGGTGTGTGTGCACATGTGATTGCATGCt-----gtgtgtgtgtgtgtgtgtgtgtgt-gtgtgtgtgtgtgtg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645842 63 + 220367699 agtgtgggtgtgtgtgcacatgtgattgcatgca-----gtgtgtgtgtatgtgtgtgtgtgt-gtgtt---------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28161875 66 - 130588469 AGTGTGGGTGTGTGTGCACATGTGATTGCATGCA-----gtgtgtgtgtgtg-gtgtgtgtgt-gtgtgtgtT------ i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64624041 58 + 155834243 CGTGTGGGTGGGTGTGCA-----------ATATA-----ACACGTGTGTGTGTGCACATGCACAGTATGTGTTT----- i calJac3.chr7 C 0 C 0 s mm10.chr4 25421664 72 - 156508116 tgtgtgtgtgtgtgtgtatatatatatgtatatatatatgtgtgtgtgtgtgtgtgtgtgtgt-gtgtgtgtg------ i mm10.chr4 I 110 I 373 s canFam3.chr2 14998306 74 - 85426708 cgtgtgggcatgcatgtg--tgtgagtgcatgcgcgtacgtgtgcatgtgtgtgagcacgtgt-gcttgtgtgtgtg-- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 488930 884 - 28733288 I a score=201065.000000 s hg38.chr1_KI270760v1_alt 50672 84 + 109528 ------------tgtT---TCAGGAACTGGTACT----GTTGACCTTGTGGAGACAGAAATGAGACTGGGTGATTTCCAGGGAcccattaggttctcatgaca s panTro4.chr1 30486459 81 + 228333871 ---------------T---TCAGGAACTGGTACT----GTTGACCTTGTGGAGACAGAAATGAGACTGGGTGATTTCCAGGGAcccattaggttctcatgaca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30075056 84 - 229942017 ------------tgtT---TCAGGAACTGGTACT----GTTGACCTTGTGGAGACAGAAATGAGACTGGGTGATTTCCAGGGAcccattaggttctcacgaca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33371029 81 + 229590362 ------------tg-----tCAGGAACTGGTACT----ATTGACCTTGTGGAGACAG-AATGAGACTGGGTGATTTCCAGGGActcactaggttctcatgaca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29882255 85 - 227556264 ------------tgtgt-TTCAGGAACTGGTACT----ATTGACCTTGTGGAGACAG-AATGAGACTGGGTGATTTCCAGGGActcactaggttctcatgaca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645905 79 + 220367699 -------------------tcaggaaCTGGTACT----ATTGACCTTgtggagacag-aatgagactgggtgatttCCAGGGACTCACTAGGTTCTCATGACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28161941 79 - 130588469 -------------------TCAGGAACTGGTACT----ATTGACCTTGTGGAGACAG-AATGAGACTGGGTGATTTCCAGGGActcactaggttctcatgaca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64624099 80 + 155834243 -------------------TTAGGAACTGGTGCT----GTTGAACTTATGGAGACAGAAATGAGACTGGGTGGTTTCCAGGGACCCACTAGGttctcatgatc i calJac3.chr7 C 0 C 0 s mm10.chr4 25422109 83 - 156508116 ------------TGTT---TCTGGGGCTGACTTTACACACTGACCT--CTGGGGCAGAAATGAGACTTG--GATTTCTAAGG-TTTGCCTGGTTCTGCTAATA i mm10.chr4 I 373 C 0 s canFam3.chr2 14998380 98 - 85426708 tgcttatgtgtctgtttgCTTAGACACTGGTTGG----ATGGGCTTTATGGGGGCAGAAATGACATTCTGTGATTTCAAGGAATGGACTA-GTTCTCATGACA i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 488930 884 - 28733288 I a score=2489282.000000 s hg38.chr1_KI270760v1_alt 50756 1065 + 109528 atcctgagagggaggcgcaactagatccactgtacagatgagggaaccgaggcccagagaggtggggccatctgcccaaagtcacacagtggcagagcagga-tctcacccaggtctatccagctctttccagtccctacactgcccACCCTCACCCCAGCTGGTCCAGGGAAGTCTGGTGCCCGCTCTGCAGAGAGGCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCAGATAG-------------GGACCTCTCCCAGGGGCCTCAGTTGAACTGTCGTAAAGGGCCAAGGAAGATGACCTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGTACAGCATGCCCGCATGTAAGCCCTGATCGCAGACTCTACCCTGGAGAGGTATAAGGCACCACTGATGATCAAG-------------TCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCAGTCACCATGGGCCATCAGTGCGGAGATGGGAGCGGGTGAATGGAGGAGCTGGAGTCTGTGCTGAGGTCTGGACGAGACagggcaaccgtaagtcccacttggcctgagacagtcccagtttctgcctgtagcctcagtgtagttaacagcagtgtcgccttgcactctcagatgtcctggtttggacagtaattatagggtcatcctaAGGTGAGGATATTCTCTAAAGAAGAGGGGAACTAACACTGACTG---------CATTCCTACCAATGCCCAGG--GGCCTTGACACAATTTCCCTCATTTAAGCCTCACAACAACCCTAAATCCTAGATGCCTCTTCCTGCACATCCAAGGTCAGAGGGCAGGGAATAGACATTCAAAGAAAGATCTGTGGCTTTGTCCAAGTCCACCTTTCAGGTGCTAACATGTGCAGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCCGGCAGGAGAGAAATCTTTAGAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGGGAAAAAATAACA--AGTCATAATCATAATCATCCACTTTCAACAGTGTTTTATAATA s panTro4.chr1 30486540 1064 + 228333871 atcctgagagggaggcgcaactagatccactgtacagatgagggaaccgaggcccagagaggtggggccatctgcccaaagtcacacagtggcagagcagga-tctcacccaggtctatccagctctttccagtccctacactgcccACCCTCACCCCAGCTGGTCCAGGGAAGTCTGGTGCCCGCTCTGCAGAGAGGCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCATATGG-------------GGACCTCTCCCAGGGGCCTCAGTTGAACTGTTGTAAAGGGCCAAGGAAGATGACCTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGTACAGCATGCCCGCATGTAAGCCCTGATCGCAGACTCTACCCTGGAGAGGTGTAAGGCACCACTGATGATCAAG-------------TCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCAGTCACCATGGGCCATCAATGCGGAGATGGGAGGGGGTGAATGGAGGAGCTGGAGTCTGTGCTGAGGTCTGGACGAGACagggcaaccgtaagtcccgcttggcctgagacagtcccagtttctgcctgtagcctcagtgtagttaacagcagtgtcgccttgcactctcagatgtcctggtttggacagtaattatagggtcatcctaAGGTGAGGATATTCTCTAAAGAAGAGGGGAACTaacactgactg---------cgttcctaccaatgcccagg--ggccttgacacaatttccctcatttaagcctcacaacaaccctAAATCCTAGATGCCTCTTCCTGCACATCCAAGGTCAGAGGGCAGGGAATAGACATTCAAAGAAAGATCTGTGGCTTTGTCCAAGTCCACCTTTCAGGTGCTAACATGTGCAGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCCGGCAGGAGAGAAATCTTTAGAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGG-AAAAAATAACA--AGTCATAATCATAATCATCCACTTTCAACAGTGTTTTATAATA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30075140 1053 - 229942017 atccggagagggaggcacaactaggtccactgtacagatgagggaaccaaggcccagagaggtggggccatctgcccaaagtcacacagtggcagagcagga-tctcacccaggtctatccagctctttccagtccctacactgcccACCCTCACCCCAGCTGCTCCAGGGAAGTCTGGTGCCCGCTCTGCAGAGAGGCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCCGGAGGCTCTGCAGACGG-------------GGACCTCTCCCAGGGGCCTCACTTGAACTGTCATAGAGGGCCAAGGAAGATGACCTAAGGACAAGCTCCCAGCAGAGAG-GCACA-----AGGCTGGAGTTAGTACAGCATGCCCACATGTAAGCCCTGATCACAGACTCTACCCTGGAGAGGTATGAGGCACCACTGATGATCAAG-------------TCCCA---AGGTCAGCAGGCAGCCTGTGTGGAATCCCCGTGCAGTCGCCATGGGCCATCCGCGCGGAGATGGGAGGGGGTGAATGGAGGAGCTGGAGTCTGTGCCGAGGTCTGGACGAGACGgggcaaccataagtcccacttggcctgagacagtcccagtttctgcctgtaacctcagtgtagttaacagcagtgtcgacttgcactgtcagatgtcctggtttggacagtaattatag-----------ggtGAGGATGTTCTCTAAAGAAGAGGGGAACTAACACTGACTG---------CGTTCCTACCGATGCCCAGG--GGTCTTGACACAATTTCCCTCATTTAAGCCTCACAACAACCCCAAATCCTAGATGCCTCTTCCTGCACATCCAAGGTCAGAGGGCAGGGAGTAGACATTCAAAGAAAGATCTGTGGCCTTGTCCGAGTCCACCTTTCAGGTGCTAACGTGTGCAGCAGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCAGACAGGAGAGAAATCTTCAGAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTGATCATGTATGGG-AAAAAATAACA--AGTCATAATCATAATCATCCACTTTCAACAGTGTTTTATAACA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33371110 1065 + 229590362 atcctgagagggaggcacaactagatccactgtacagatgaaggaacggagacccagagaggtggggccatctgctcaacgtcacacaatggcagagaagga-tctcatccaggtctatccagctcctcccagtccccacactgccCACCCTCACCCTAGCTGGTCCAGGGAAGTCAGGTTCCTGCTCTACAGAGAATCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCAGACAG-------------GGACCTCTCCCAGGGGCCTCACTTGTACTGTCGTAAAGGGCCGAGGAAGATGACTTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGCACAGCATGCCCGCATGTAAGCCCTGATCACAGACTCTACCCCGGAGAGGTGTGAGGCAGCACTGATGGTCAAA------------CCCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCAGTAGCCATGGGCCATCCGCACAGAGAGGGGAGGGGGTGAATGGAGGCACTGGAGTGTGTGCTGAGGTCAGGGTGGGACagggcaaccgtaagtcccacttggcctgagacagtcccagtttctgcctatagcctcagtgtagttaacagcagtgtcgccttgcactctcagatgtcctggtttggacagtaattacagggtcatcctaAGGTGAGGACATTCTCTAAAGAAGAGGGAGactgacacttactg---------tgttcctaccaatgcccagg--ggccttgacacagtttccctcatttaagcctcacaacaaccctAAACCCCAGATGCCTCTTCCTGCACATCCAAGGTTGGAGGGCAGGGAATAGATATTCAAATAAAGATCTGTGGCCTTGTCCAAGTCCACCTGTCAGGTGCTAACGTGTGCGGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCATGCAGGAGAGAAATCTTTAGAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGG-AAAAAATAACA--GGTCATAATCATAATCATCCACTTTCAATAGTGCCTTATAATA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29882340 1065 - 227556264 atcctgagagggaggcacaactagatccactgtacagatgaaggaacggagacccagagaggtggggccatctgctcaacgtcacacaatggcagagaagga-tctcatccaggtctatccagctcctcccagtccccacactgcccaccctCACCCTAGCTGGTCCAGGGAAGTCAGGTTCCTGCTCTACAGAGAATCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCAGGCAG-------------GGACCTCTCCCAGGGGCCTCACTTGTACTGTCGTAAAGGGCCGAGGAAGATGACTTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGCACAGCATGCCCGCATGTAAGCCCTGATCACAGACTCTACCCTGGAGAGGTGTGAGGCAGCACTGATGGTCAAG------------CCCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCAGTAGCCATGGGCCATCCGCGCAGAGAGGGGAGGGGGTGAATGGAGGCACTGGAGTGTGTGCTGAGGTCAGGGTGGGACagggcaaccgtaagtcccacttggcctgagacagtcccagtttctgcctatagcctcagtgtagttaacagcagtgtcgccttgcactctcagatgtcctggtttggacagtaattacagggtcatcctaAGGTGAGGACATTCTCTAAAGAAGAGGGAGactgacacttactg---------tgttcctaccaatgcccagg--ggccttgacacagtttccctcatttaagcctcacaacaaccctAAACCCTAGATGCCTCTTCCTGCACATCCAAGGTTGGAGGGCAGGGAATAGATATTCAAATAAAGATCTGTGGCCTTGTCCAAGTCCACCTGTCAGGTGCTAACGTGTGCGGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCATGCAGGAGAGAAATCTTTAGAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGG-AAAAAATAACA--GGTCATAATCATAATCATCCACTTTCAATAGTGCCTTATAATA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32645984 1060 + 220367699 ATCCTGAGAGGGAGGTACAACTAGATCCACTGTACAGATGAAGGAACCGAGACCCAGAGAGGTGGGGCCATCTGCTCAACGTCACACAATGGCAGAGAAGGA-TCTCATCCAGGTCT-CCCAGCTCCTCCCAGTCCCCACACTGCCCACCCTCACCCTAGCTGGTCCAGGGAAGTCTGGTTCCTGCTCTGCAGAGAATCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCAGACAG-------------GGACCTCTCCCAGGGGCCTCACTTGTACTGTCGTAAAGGGCCGAGGAAGATGACTTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGTACAGCATGCCTGCATGTAAGCCCTGATCACAGACTCTACCCTGGAGAAGTATGAGGCACCACTGACGGTCAAG------------CCCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCAGTTGCCATGGGCCATCCGCgcagagaggggaggaggtgaaTGGAGGCACTGGAGTGTGTGCTGAGGTCGGGGTGGGACAGGGCAACCATAAGTCCCACTTGGCCTGAGACAGTCCCAGTTTCTGCCTATAGCCTCAGTGTAGTTAACCGCAGTGTCGCCTTGCACTCTCAGATGTCCTGGTTTGGACAGTAATTATAGGATCATCCTAAGGTGAGGACATTCTCTAAAGAAGAGGGAGACTGAC----ACTG---------CGTTCCTACCAATGCCCAGG--GGCCTTGACACAGTTTCcctcatttaagcctcacaacaaccctaaaCCCTAGATGCCTCTTCCTGCACATCCAAGGTCGGAGGGCAGGGAATAGATATTCAAATAAAGATCTGTGGCCTTGTCCAAGTCCACCTGTCAGGTGCTAACGTGTGCGGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-AGGCCAGCTCCAGCAGGAGGAGCACGCAGGAGAGAAATCTTTAAAGTGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGG-AAAAAATAACA--GGTCATAATCATAATCATCCACTTTCAATAGTGCCTTATAATA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28162020 1061 - 130588469 atcctgggagagacgcacaactagatccactgtacagatgaaggaaccgagacccagagaggtggggccatctgcccaatgtcacacaatggcagagaagga-tctcatccaggtctgtccagctcctcccagtccccacactgccCACCCTCACCCTAGCTGGTCCAGGGAAGTCAGGTTCCTGCTCTGCAGAGAATCCTGGAGTA----GGCAGCTACTGTATG-------------GGGCTGGAGGCTCTGCAGACAG-------------GGACCTCTCCCAGGGGCCTCACTTGTACTGTCGTAAAGGGCCAAGGAAGATGACTTAAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTACTACAGCATGCCCGCATGTAAGCCCTGATCACAGACTCCACCCTGGAGAGGTGTGAGGCAGCACTGATGGTCAAG------------CCCCCA---AGGTCAGCAGGCAGCCTGTGGGGAATCCCCATGCGGTTGCCATGGGCCATCTGCGCGGAGATGGGAGGGGGTGAATGGAGGCGCTGGAGTGTGTGCTGACGTCAGGGTGGGACagggcaaccgtaagtcccacttggcctgagacagtcccagtttctgcctatagcctcagtgtagttaacagcagtgtcgccttgcactctcagatgtcctggtttggacagtaattatagggtcatcctaAGGTGGGGACATTCTCTGAAGAAGAGGGAGACTGAC----actg---------cgttcctaccaatgcccagg--ggccttgacacagtttccctcatttaagcctcacaacaaccctAAACCCTAGATGCCTCTTCCTGCACATCCAAGGTCAGAGGGCAGGGAATAGACATTCAAATAAGGATCTGTGGCCTTGTCCAAGTCCACCTTTCAGGTGCTAACGTGTGCGGCGGGATGAAAGAGAACTCTCCACAGTGCCTG-GGGCCAGCTCCAGCAGGAGGAGCACGCAGGAGAGAAATCTTTAGAGGGTTCTCTTTAGCTTACCAGCCAGATAGGGAA-AGAATTTTATCATGTATGGG-AAAAAATAACA--AGTCATAATCATAATCATCCACTTTCAATAGTGCCTTATAATA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64624179 986 + 155834243 atcttgagagggatacccaaccagatccactgtagagatgagggaactgaggcccagggaggtggggccatctgcccttagtcacacggtgg-agagcaaga-tctcacccgggtctctccagctcttcccagtccccacactgcccACCCTCACCCCAGCTGGTCCAGGGAAGTCCAGGGCCCGCTCTGCAGAGA-----GGAGGA----GGCAGCTGCTGTGTG-------------GGACTGGAGACCCAAAGAGATG-------------AGACCTCTGCCAGGGGCCTCACTTGTACTGTCATACAGGGCCAAGGAAGCTGACCTGAGGACCAGCTCCCAGCAGAGAA-GCACA-----AGGCTGGAGTTAGTAC--CACGCCTGCATGTAAGCCCTGATC-CAGACTCTACCCTGGAGAGGTCTGAGACA-CACTGACGGTCAAG-------------TCCCA---ACGTCAGCAGGCAGCCTGTGAGTAATCCCGACGCAGCAGCCATGGGCCATCCGCGCAGAGGTGGGAGGGAGTGAACGCAGGAGCTGGAGTCTGTGCTGGGGTCTGGACGGGGCaggacagccctaagtcccacttggcctgggacagtcccagtttctgcctgtagcctcagtgtagttaacagcagtgtccccttgcattctcagatgtcctgctttgggcagtcattacagggtcaccctaAGGTGAGGATATTCTCTAAAGAAG-GGGGAACTAACACTGACTG---------CATTTCTACCAATGCCCA-G--GGCCCGGACACAATTTCCCTCCGTTAAGCTTCACAACAACCCTAAATCCTCGATGCCTCTTCCTGTGCATCCAAGGTCAGAGGGCACGGAATAGACATTCAAAGAAAGAGCTGTGGCCTTGTCCAAGTCCACCTTTCAAGTGCTAATGTGCGCAGCAGGATGAAAGAGAACTCTCCACAGTGCCTT-GGGCCAGCCCCA-CAGGAGGAGTGG--------------------------------------------GGTAGAGAA-AGATTTGCATCATGTATGGG-AAAAAACAACAACAGTCACAGTCACCATCATCC----------------------- i calJac3.chr7 C 0 C 0 s mm10.chr4 25422192 972 - 156508116 GATCTGCAAGGGAGTTAAGACTGTAACTACCTCACAGC--AGGGAACTGAGGCCCTAAG------------------------ACACAGCAATAGGGACAGACTCTGACACATGCCCATTC------TTTCTTTCCCTGCACAGCT--ATCTCATTCT-GCTTCTCTGGGGAAGTC-ATTCCCCACTCCACAGAGAGGCCTGGAGTAGATGGGCAGCTGCATTGGGGACCATAGCAGGTGGGCAGGAGGCTCTAGAGAAGGGGCCTGAGAGCATGGGCCTCTCTCAGGACCTTCTCTTGTGCTGTC--CAAGAGCCAAGGGAGATGACC-AAGGACAAGCACCTGGAAGAGAATGCACACCGGGAGGCCAGAA-----GCCACATGCCATATTTTGGACCC--ATCTCAG---CCACCCAGGAGAGGCCTGAGGTATAGCCAGCAGTCACAGTCACCATCCCTCCCCCACTCAGATCAGCAAACACCTCATGAA------------AGTAACCATGGGCAGT-----CAGAGGTGGGAGGAATT------------TGAAATAT----TGTGGTT----------------GCCCTAAACCTCACCTGGCCTCA-----------TTTATCCCTGCTTCCT--ATGTAATCAAGAGTAGTGGCTCCTGG-ATGCTCAAAAG-------ATGTACGTTACTTATAGACTGA-CCTAAGGTGGGGGGACTCTCCAGAGGAAACAAGACCCAACACTGATAGTGAGTGTTCTGGTCGTGCCAGGACCCTTGCCACCATTGCCACAGGTTTCCTCAGTTAATGGGCACAGC-ACCCTCCACCCTA---------CCTTGAGCAGGTGGAGTTAGTGAACAGCTAAGAAAAACTCTGAGAAAGATCAGGTCCCTT-----AGCACACCTTTCTCACGCTGAAATGAGCCACAGAATG-GAGAGAGACCTCCGTCATGCTTGAGGGCTTGCTCCATT----GGACACCGTGGTGGATAACTTCCTAAGGGCT--TCTGGAGCTCACCAGCCAGGTTGGGAAGAGAATTTCATCACAGTTGGA-AGGAGACTAGA--AAGAA----------------CTTTCAGCAGTTTCTTGTAAAa i mm10.chr4 C 0 C 0 e nomLeu3.chr24 488930 884 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=3600.000000 s hg38.chr1_KI270760v1_alt 51821 1 + 109528 C s panTro4.chr1 30487604 1 + 228333871 C i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30076193 1 - 229942017 C i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 489814 1 - 28733288 C i nomLeu3.chr24 I 884 C 0 s rheMac3.chr1 33372175 1 + 229590362 C i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29883405 1 - 227556264 C i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647044 1 + 220367699 C i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163081 1 - 130588469 C i chlSab2.chr20 C 0 C 0 s mm10.chr4 25423164 1 - 156508116 c i mm10.chr4 C 0 I 2033 e canFam3.chr2 14998478 0 - 85426708 C e calJac3.chr7 64625165 0 + 155834243 C a score=1077804.000000 s hg38.chr1_KI270760v1_alt 51822 465 + 109528 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAAAGGCCTGGATCTGCAAGCTCAGGCCCTGAGCTTAGTGT-----------------GGAGAGACA-GCAGCCCAAGGAAACAGGGGGATAAAATTGAGCAGCATCAAGAAACCACAGGGAGGAG-AATCCGACAATCTGAAGCCCCAGGGAA-CTGCAGACTC--TA-GGGAGACCTCCGGCCACCCCACAGCACACAGGGCAGGGGCTCAGGCTGGTTTAAATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCTCGCTGGTGACA-CTGGGGCCTGGGTGCCTGGTGAATCTGCAAGAGGGGGCTCAGCCTGCGATGTTAAGGTGGCA---------GGTGGGATTTTACTCCCAGCTC----CTTCCCCACTCCCCCTGTCATGTGACCTTGCAGAGCACCGGGTGGAGCAAAACGCATTTCCCTGTCCC----TCTGATGTTGG s panTro4.chr1 30487605 465 + 228333871 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAAAGGCCTGGATCTGCAAGCTCAGGCCCTGAGCTTAGTGT-----------------GGAGAGACA-GCAGCCCAAGGAAAGAGGGGGATAAAATTGAGCAGCATCAAGAAACCACAGGGAGGAG-AATCCGACAATCTGAAGCCCCAGGGAA-CTGCAGATTC--TA-GGGAGACCTCCGGCCACCCCACATCACACAGGGCAGGGGCTCAGGCTGGTTTAAATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCTCGCTGGTGACA-CTGGGGCCTGGGTGCCTGGTGAATCTGCAAGAGGGGGCTCAGCCTGCGATGTTAAGGTGGCA---------GGTGGGATTTTATTCCCAGCTC----CTTCCCTACTCCCCCTGTCATGTGACCTTGCAGAGCACCGGGTGGAGCAAAACGCATTTCCCTGTCCC----TCTGATGTTGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30076194 465 - 229942017 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAAAGGCCTGGATCTGCAAGCTCAGGCCCTGAGCTTAGTGT-----------------GGAGAGACA-GCAGCCCAAGGAAAGAGGGGGATAAAATTGAGCAGCATCAAGAAACCACAGGGAGGAG-AATCCAACAATCTGAAGCCCCAGGGAA-CTGCAGACTC--TA-GGGAGGCCCCCGGCCACCCCACAGCACACAGGGCAGGGGCTCAGGCTGGTTTAAATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCTCGCTGGCGACA-CTGGGGCCTGAGTGCCTGGTGAGTCTGCAAGAGGGGGCTGAGCCTGCGATGTTAGGGTGGCA---------GGTGGGATTTTATTCCCAGCTC----CTCCCCCGCTCCCCCTGTCATGTGACCTTGCAGAGCACCGGGTGGAGCAAAACGCATTTCCTTGTCCC----TCTGATGTTGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 489815 478 - 28733288 TAAAGAGTAGAAGCTTAAAATAGATGGTTTTTTGCTCAGTCAAGC------AAGGCGGGGTT--------TCTGGCTCAGAGCTTAGTGTGAGGTGTATGGAGGTGGGGAGGGAAGTACAGTTACAAGAAGGAGATGGA-aaaatttagcaggaaaagaaaaccaggataagcagtgatcaggagaccc--agccctagggaatttgtagaccccata-gagagtcccctggacattgcacagtgc-ctgagatgcagctcaagccagtttgtaagacatggaagtgacaccaggaatccggaggacttgggacacccCAGCTGGAGACATCTGAGGCCTTGGCGTTCTGTGA-TCT-------GGTGGTGAGTCTGCAGTGTTACAGTGGTACAATGGTAGGTTGGGTTTTTGTTCCCAACTCTTCATTCCCTTCCTGCCTCTGCCATACGCCCTTGCAGAGCACTGGAACAGGCAGGGTACGGTTGCCTGTCC------ctgatcttgg i nomLeu3.chr24 C 0 I 24318 s rheMac3.chr1 33372176 461 + 229590362 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAACGGCCGGGATCTACAAGCTCAGGCCCTGAGCTTAGCGT-----------------GGAGAGACA-GCAGCCCAAGGAAAGAGGGGGATAAAATTGAGCAGCGTCAAGAAACCAGAGGGAGGAG-AATATGGCAATCTGAAGCCCTGGTGAA-CTGCAGACTC--TA-GGGGGACCTCT-GCCATCCCACGGCACACAGGGCAGGGGCTCGGGCTGGTTTACATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCCCACTGGCGA-A-CTGGAGCCTGGGTGCTTGGTGATTCTGCAAGAGGGGGCTGAGCCTGCGATGTTAAGGTGGCA---------GGTGAGATTTTGTTCCCAGTTC----CTCTCCTGCTCCCCCTGTCATGTGACCTTGCAGAGCACCGGGTGG-GCAAAAGACATTTCCCTGTCCC-----CGGATGTTGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29883406 461 - 227556264 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAACGGCCGGGATCTACAAGCTCAGGCCCTGAGCTTAGCGT-----------------GGAGAGACA-GCAGCCCAAGGAAAGAGGGGGATAAAATTGAGCAGCGTCAAGAAACCAGAGGGAGGAG-AATATGGCAATCTGAAGCCCTGGTGAA-CTGCAGACTC--TA-GGGGGACCTCC-GCCATCCCACGGCACACAGGGCAGGGGCTCAGGCTGGTTTACATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCCCACTGGCGA-A-CTGGGGCCTGGGTGCTTGGTGATTCTGCAAGAGGGGGCTGAGCCTGCGATGTTAAGGTGGCA---------GGTGAGATTTTGTTCCCAGTTC----CTCTCCTGCTCCCCCTGTCATGTGACCTTGCAGAGCACCGGGTGG-GCAAAAGACATTTCCCTGTCCC-----CGGATGTTGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647045 445 + 220367699 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAAAGGCCAGGATCTATAAGCTCAGGCCCTGAGCTTAGTGT-----------------GGAGAGACA-GCAGCCCAAGGAAA---------------GAGCAGCGTCAAGAAACCAGAGGGAGGAG-AATATGGCAATCTGAAGCCCCGGCGCA-CTGCAGACTC--TA-GGGGGACCTCC-GCCATCCCATGGCACACAGGGCAGGGGCTCAGGCTGGTTTACATGCTGTTAAAGGTA----AGGAGTTTGGAGGACTTGGGG-GCCCCTGCTGGCAA-A-CTGGGGCCTGAGTGCTTGGTGACTCTGCAAG-GGGGGCTGAGCCTGCGATGTTAAGGTGGCA---------GGTGAGATTTTGTTCCCAGTtc----ctctcctgctcctcctgTCATGTGACCTTGCAGAGCACCGGGTGG-GCAAAAGACATTTCCCTGTCTC-----CGGATGTTGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163082 460 - 130588469 TAAAGGGTAGAAACTCAAAATAGATGGCCCTTTGTTCAGCCAGACAGAGGAAAGGCCGGGATCTACAAGCTCAGGCCCTGAGCTTCGCGT-----------------GGAGAGACA-GCAGTCCAAGGAAAGAGGGGGATAAAATTGAGCAGCGTCAAGAAACCAGAGGGAGGAG-AATACGGCAATCTGAAGCCCCGGCGAA-CTGCAGACTC--TAGGGGGGACCTCC-GCCATCCCATGGCACACAGGGCAGGGGCTCAGGCTGGTTTACATGCTGTTAAAGGTA----AGGAATTTGGAGGACTTGGGG-GCCCCCACTAGCGA-A-CTGGGGCCTGGGTGCTTGGTGATTCTGCAAG-GGGGGCTGAGCCTGCGATGTTAAGGTGGCA---------GGTGAGATTTTGTTCCCAGTTC----CTCTCCTGCTCCCCC-GTCATGTGACCTTGCAGAGCACCGGGTGG-GCAAAAGATGTTTCCCTGTCCC-----CGGATGTTGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64625165 450 + 155834243 ------------ACCCAACATAGATGGCCCTTTGCTCAGCCCGCCAGAGGAAAGACCTGGCTCAACAAGCTCAGGCCCTAAGCTTAGTGT-----------------GGAGAGA---GCAGCCCAAGGAAGCAGGGTGATAAAATTGAGCAGCATCAAGAAACCAGAGGGAGGAG-AACCTGACAGTCTGAAGCTCCAGGGAA-CTGCAGACTC--TC-GGGAGACCTCTGGCCACGCCACAGCACACAGGGCAGGGGCCCAGGCTAGTTTACATGCTGTTAAAGGTA----AGGAGTTTGGAGAACCTGGGG-TCTCAAGCAGGTGACA-CTGGGGCCTGGGTGCCTGGTGATTCTGCAAGGGAGGGCCAAGTCAGCAATGTTAAGGTGGCA---------GGTGGGATTTTGTT--CGGTTC----CTTCCTCCCTCCCC--GTCATGTGACCCGGCAG-GAACCGGTTGGGGCAAAACGCATTTCCCTGTCTGTCTGTCTGATGCTGG i calJac3.chr7 C 0 C 0 e mm10.chr4 25423165 2033 - 156508116 I e canFam3.chr2 14998478 0 - 85426708 C a score=278495.000000 s hg38.chr1_KI270760v1_alt 52287 118 + 109528 GTGCTGTGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGTCCGCT-GGGGCCTGAGGAGGCTTCCCCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG s panTro4.chr1 30488070 118 + 228333871 GTGCTGTGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGTCCGCT-GGGGCCTGAAGAGGCTTCCCCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30076659 118 - 229942017 GTGCTGTGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGTCCGCT-GGGACCTGAAGAGGCTTCCCCTGCTTCCCCATGTGTCCCCTTTACGTTTGGGCTGGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33372637 119 + 229590362 GTGCTGCGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGTTCCCAGTTGCCCGCTGGGGGCCTGAAGAGGCTTCCTCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29883867 119 - 227556264 GTGCTGCGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGCCCGCTGGGGGCCTGAAGAGGCTTCCTCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647490 118 + 220367699 GTGCTGCGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGTCCGCT-GGGGCCTGAAGAGGCTTCCTCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163542 119 - 130588469 GTGCTGCGACGTGTCTCTTGCTGACCCATGGGACACAAGCAACAGCTCCCAGTTGTCCACTGGGGGCCTGAAGAGGCTCCCTCTGCTTCCCCATGTGCCCCCTTTACATTTTGGCTGGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64625615 116 + 155834243 GTGCTGTGATGTGTCTCATGCTGACCTATGGAACACAAGCAACAGCTGCCAGTTGTGCACT-GGGGCCCGAAGACGGTTCCTCTGCTTCCCCTTGTG-CCCCTTTACATTT-GGCTGGG i calJac3.chr7 C 0 C 0 e mm10.chr4 25423165 2033 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=260424.000000 s hg38.chr1_KI270760v1_alt 52405 101 + 109528 AGAGATCATGAGAAGAACATGGAGCCGCTGGCTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCCACGGAAGCCTGAAGCAGAGCCCCCCACCCTAGGCCA s panTro4.chr1 30488188 101 + 228333871 AGAGATCATGAGAAGAACATGGAGCCGCTGGCTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCCACGGAAGCCTGAAGCAGAGCCCCCCACCCTAGGCCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30076777 101 - 229942017 AGAGATCACGAGAAGAACATGGAGCCACTGACTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCCACGGAAGCCTGAAGCAGAGCCCCCCACCCTAGGCCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33372756 101 + 229590362 AGAGGTCATGAGAAGAACGTGGAGCCGCTGGCTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCCACAGAAACCTGAAGCAGAGCCCCCCACCCTAGCTCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29883986 101 - 227556264 AGAGGTCATGAGAAGAACGTGGAGCCGCTGGCTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCCACAGAAACCTGAAGCAGAGCCCCCCACCCTAGCTCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647608 101 + 220367699 AGAGGTCATGAGAAGAACATGGAGCCACTGGCTCAGAACAGGCCTAAGGAGCAGCCCCAGAACCTACAGAAACCTGAAGCAGAGCCCCCCACCCTAGGTCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163661 101 - 130588469 AGAGGTCATGAGAAGAACATGGAGCTGCTGACTCAGAACAGGCCTAGGGAGCAGCCCCAGAACCTACAGAAACCTGAAGCAGAGCCCCCCACCCTAGCTCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64625731 101 + 155834243 AGAGGGCATGAGAAGAACATGGAGCCGCTGGCTCAGAACAGGGCTAAGGAGCAGCCCCAAAACCCACGGGAGGCTGAAGCAGAGCCCCCCACCCTAGGTCT i calJac3.chr7 C 0 I 168 s mm10.chr4 25425198 82 - 156508116 AAAAGCCATGGTGAGGACAAAGAACCTATGGTTTCCAACAGGACCGAGGAGCAGACT----------------CTAAAGCAGA---CCTCACCCCATTGCA i mm10.chr4 I 2033 I 2 e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=481816.000000 s hg38.chr1_KI270760v1_alt 52506 199 + 109528 TGGGCCATGGACTCATGAGACAGAAAGAGAAGCGTTTGCTTCTAAAAGCCCC-GAGACATTCAGCTTGTTACAGAGAACAAGTCAAAAAGAAAGATGAAAATCTAATACAGTCACCCAAGCAGATTTCAGCATGGAATCC-TTTTTTGGGAAGCACCTGTCAGCATCTTTTAGAACGCAGCATCCCTCAGAGCCTGCTGCT s panTro4.chr1 30488289 199 + 228333871 TGGGCCATGGACTCATGAGACAGAAAGAGAAGCGTTTGCTTCTAAAAGCCCC-GAGACATTCAGCTTATTACAGAGAACAAGTCAAAAAGAAAGATGAAAATCTAATACAGTCACCCAAGCAGATTTCAGCATGGAATCC-TTTTTTGGGAAGCACCTGTCAGCATATTTTAGAACGCAGCATCCCTCAGAGCCTGCTGCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30076878 201 - 229942017 TGGGTCATGAACTCATGAGACAGAAAGAGAAGCGTTTGCTGCTAAAAGCCCCTGAGACGTTCAGCTTGTTACAGAGAACAAGTCAAAAAGAAAGATGAAAATCTAATACAGTCACCCAAGCAGATTTCAGCATGGAATCCTTTTTTTGGGAAGCACCTGTCAGCATCTTTTAGAACGCAGCATCCCTCAGAGCCTGCTGCT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33372857 200 + 229590362 TGGGCCACGGACTCATGAGACAGAAAGAGAAGTGTCTGCTGCTAAAAGCCCCGGAGATGTTCAGCTTGTTACAGAGAACAAGTTAAAAAGAAAAATGAAAATCTAATACAGTCACCCAAGCAGATTTCAGGATGGAATCC-TTTTTCGGGAAGCACCTGTCGGCATCTCTCAGAACACAGCATCCCTCAGAGCCTGCTGCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29884087 200 - 227556264 TGGGCCACGGACTCATGAGACAGAAAGAGAAGTGTCTGCTGCTAAAAGCCCCGGAGATGTTCAGCTTGTTACAGAGAACAAGTTAAAAAGAAAAATGAAAATCTAATACAGTCACCCAAGCAGATTTCAGGATGGAATCC-TTTTTCGGGAAGCACCTGTCAGCACCTCTCAGAACACAGCATCCCTCAGAGCCTGCTGCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647709 199 + 220367699 TGGGCCACGGACTcatgagacagaaagagaagtgTTTGCTGC-GAAAGCCCCTGAGATGTTCAGCTTGTTACAGAGaacaagttaaaaagaaaaatgaaaatctaataCAGTCACCCAAGCAGATTTCGGGATGGAATCC-TTTTTTGGGAAGCGCCTGTCAGCATCTCTCAGAACGCAGCATCCCTCAGAGCCTGCTGCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163762 199 - 130588469 TGGGCCACGGACTCATGAGACAGAAAGAGAAGTGTTTGCTAC-GAAAGCCCCTGAGATGTTCAGCTTGTTACAGAGAAGAAGTTAAAAAGAAAAATGAAAATCTAATACAGTCGCCCAAGCAGATTTCAGGATGGAATCC-TTTTTTGGGAAGCGCCTGTCAGCATCTCTCAGAATGCAGCATCCCTCAGAGCCTGCTGCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64626000 194 + 155834243 tggACCATGGACTCTTG----AGAAAGAGAAGCGTTTGCTGCTAAATGCCCCTAAGATGTTCAGCATGTTACTGAGAAC-AGTCAAAAAGAAAAATGAAAATCGAACACAGTCACCCAAGCAGATTTCAGGATGGAATCC-TTTTTCAGGAAGCACCTG-CAGCATGTCTCAGATCACGGCATCCCTCAGAGCCTGCTGCT i calJac3.chr7 I 168 C 0 s mm10.chr4 25425282 187 - 156508116 TGACTCCCAGGCCCATAAGTCAGGAAGAAAAAAGCTTGCTGCTACATGCCT--GGGATGTTTGTGTTGTTGCATAGAA-AAATCAGAAAGAAATATGAAATCCCAGTGC-----CTCCAGTCAGTTTC-GTATGGGAGCC-TTTTCCTCTGCAAATCTGTTAGCAGC-CTCAGAA--CAGCCTTCCTCAGAA-CTGCAGCT i mm10.chr4 I 2 I 1004 e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=231523.000000 s hg38.chr1_KI270760v1_alt 52705 104 + 109528 CTGGGCAGCACAGATTATCCTCCTTCCCAGCCTGCAAAAAATAAAGGGACCACATTGGCAACAGGGGAGAGACCTCTGCCCACCCAGATGCTGCAGATCCTCAT s panTro4.chr1 30488488 104 + 228333871 CTGGGCAGCACAGATTATCCTCCTTCCCAGCCTGCAAAAAATAAAGGGACCACATCGGCAACAAGGGAGAGACCTCTGCCCACGCAGATGCTGCAGATCCTCAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30077079 104 - 229942017 CTGGGCAGCACAGATTATCCTCGTTCCCAGCCTGCAAAAAATAAAGGGACCACATCGGCAACAGGGGACAGACCTCTGCCCACCGAGATGCCGCAGATCCTCGT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33373057 102 + 229590362 CTGGGCAGCGCAGATTATCCTCCTTCCCAGCCTGCAAGAAAT--AGAGACCACACTGACAATAGGGGACAGACCTCTGcccacccagatgctgcagatcctcat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29884287 102 - 227556264 CTGGGCAGCGCAGATTATCCTCCTTCCCAGCCTGCAAGAAAT--AGAGACCACACTGACAATAGGGGACAGACCTCTGCCCACCCAGATGCTGCAGATCCTCAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32647908 104 + 220367699 CTGGGCAGCACAGATTAGCCTCTTTCCCAGCCTGCAAGAACTAAAGGGACCACACTGACAACAGGGGACAGACCTCTGCCCACCCAGATGCTGCAGATCCTCAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28163961 104 - 130588469 CTGGGCAGCGCAGATTATCCTCCTTCCCAGCCCGAAAGAACTAAAGGGACCACACTGACAGTAGGGGACAGACCTCTGCCCACCCAGATGCTGCAGATCCTCAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64626194 104 + 155834243 CTGGGCAGTGCAGATTATCCTCCTTCCCAGCCTGAAAAAAATAAAGGGACCACATTGGCAAGAGACGACAGACCTCTGCCCACCCAGACACTGCAGTTCCTCAT i calJac3.chr7 C 0 C 0 e mm10.chr4 25425469 1004 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=1284730.000000 s hg38.chr1_KI270760v1_alt 52809 544 + 109528 CTCTTGCTCCACCTCCCTAGTTA-CTCCAAGCACACATAGTGGGCACCCACATGCTCA-GGTG----TCATCCTCAGCCATCCTCTCT----GCCCTCTTTGTGGAC--TGCCCACCCCAACAGGCCATCAGTAGGGCCTCCTGCCTCTGCCACCGGTGCTGGTGTCCTGGATCCTGCACCTCTGCTGAGGGCTG-----------------------GGCATGGAATTTCTGCACTGTGCTCATCCTAAAACCCTAGAAGGCCCAGGCTATGCTGGATCCGTGGCCTGCT----------------------------------Ctggggagaatgt-----------------------------------------------------cccacc---------------------------------tcttgaccctgggttatacctggccccctaagcagcactgcctgagtcctgagcctcacacagagcctcctgaatatggcaatgcttcgggcctgcacacttctccccTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TGCATGCGTCTCCTTCCTCAGAA--TCATTTTTGTTTTTATCCCCAGGTGCCTGTTTTCTAAAATAAAGCCCTCTCTTCTCCTGTAACCCATTGCATTTAACTCACGCCAATAGAC s panTro4.chr1 30488592 544 + 228333871 CTCTTGCTCCACCTCCCTAGTTA-CTCCAAGCACACATAGTGGGCACCCACAAGCTCA-GGTG----TCATCCTCAGCCATCCTCTCT----GCCCTCTTTGTGGAC--TGCCCACCCCAACAGGCCATCAGTAGGGCCTCCTGCCTCTGCCACCGGTGCTGGTGTCCTGGATCCTGCACCTCTGCTGAGGGCTG-----------------------GGCATGGAATTTCTGCACTGTGCTCATCCTAAAACCCTAGAAGGCCCAGGCTATGCTGGATCTGTGGCCTGCT----------------------------------Ctggggagaatgt-----------------------------------------------------cccatc---------------------------------tcttgaccctgggtgctacctggccccctaagcagcactgcctgagtcctgagcctcacacagagcctcctgaatatggcaatgctttgggcctgcacccttctccccTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TGCATGCGTCCCCTTCCTCAGAA--TCATTTTTGTTTTTATCCCCAGGTGCCTGTTTTCTAAAATAAAGCCCTCTCTTCTCCTGTAACCCATTGCATTTAACTCACACCAATAGAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30077183 548 - 229942017 CTCCTCCTCCACCTCCCTAGTTT-CTCCAAGCACACATAGTGGGCACCCACATGCTCA-GGTGTGACTCATCCTCAGCCATCCTCTCT----GCCCTTTTTGTGGAC--TGCCCACCCCAACAGGCCATCAGTAGGGCCTCCTGCCTCTGCCACCAGTGCTGGTGTCCTGGATCCTGCACCTCTGCTGAGGGCTG-----------------------GGCATGGAATTTCTGCACTGTGCTCATCCTAAAACCCTAGAAGGCCCAGGCTACGCTGGATCTGTGGCCTGCT----------------------------------Ctggggagaatgt-----------------------------------------------------tccatc---------------------------------tcttgaccctgggtgctacctggccccctaagcagcactgcctgagtcctgagcctcacacagagcctcctgaatatggcaatgcttcgggcctgcacccttctctccTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TGCATGCGTCCCCTTCCTCAGAA--TCATTTTTGTTTTTATTCCGAGGTGCCTGTTTTCTAAAATAAAGCCCTCTCTTCTCCTTTAACCCATTGCATTTAACTCACGCAAATAGAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33373159 547 + 229590362 ctcctgctccacctccctagtta-ctccaagcacacatcataggcacccacgtgctca--gtgccactcgccctcagccgtcctctct----gccctctttgtggac--tgcccaccgcaacaggccatcagtggggcttcctgcctctgccaccggtgctggtgtcctggatcctgcacctctgctgagggctg-----------------------ggcatggaatttctgcactgtgttcatcctaaaaccctagaaggcccaggctgtgctgggtctgtggcctgct----------------------------------ctggggagaatgc-----------------------------------------------------cccaac---------------------------------tcttgacccggggtgctacctggcctcctaagcagcactgcctgagtcctgagcctcacacagagcctcctgaatatggctgtgcttctagcctgcacccttctccccTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TGCATGCGTCCCCTTCCTCAGAA--TCATTTTTGTCTTTATCCCCAGGGGCCTGTTTTCTAAACTAAAGCCATCTCTTCTCCTTTAACCCATTGCATGTAACTCATGCAAATAGAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29884389 547 - 227556264 CTCCTGCTCCACCTCCCTAGTTA-CTCCAAGCACACATCATAGGCACCCACGTGCTCA--GTGCCACTCGCCCTCAGCCGTCCTCTCT----GCCCTCTTTGTGGAC--TGCCCACCGCAACAGGCCATCAGTGGGGCTTCCTGCCTCTGCCACCGGTGCTGGTGTCCTGGATCCTGCACCTCTGCTGAGGGCTG-----------------------GGCATGGAATTTCTgcactgtgttcatcctaaaaccctagaaggcccaggctgtgctgggtctgtggcctgct----------------------------------ctggggagaatgc-----------------------------------------------------cccaac---------------------------------tcttgacccggggtgctacctggcctcctaagcagcactgcctgagtcctgagcctcacacagagcctcctgaatatggctgtgcttctagcctgcacccttctccccTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TGCATGCGTCCCCTTCCTCAGAA--TCATTTTTGTCTTTATCCCCAGGGGCCTGTTTTCTAAACTAAAGCCATCTCTTCTCCTTTAACCCATTGCATGTAACTCATGCAAATAGAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32648012 547 + 220367699 CTCCTGCTCCACCTCCCTAGTTA-CTCCAAGCACACATCGTGGACACCCACGTGCTCA--GTGCCACTGCCCCTCAGCCGTCCTCTCT----GCCCTCTTTGTGGAC--TGCCCACCGCAACAGGCCATCAGTGGggcttcctgcctctgccaccgGTGCTGGTGTCCTGGATCCTGCACCTCTGCTGAGGGCTG-----------------------GGCATGGAATTTCTGCACTGTGCTCATCCTAAAACCCTAGAAGGCCCAGGCTGTGCTGGGTCTGTGGCCTGCT----------------------------------GTGGGGAGAATGC-----------------------------------------------------CCCAAC---------------------------------TCTTGACCCTGGGTGCTACCTGGCCCCCTAAGCAGCACTGCCTGAGTCCTGAGCCTCACACAGAGCTTCCTGAACATGGCTCTGCTTCTAGCCTGCACCTTTCTCCCCTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGACGGAAGGAGCCTGG-----TGCATGTGTCCCCTTCCTCAGAA--TCATTTTTGTCTTTATCCCCAGAGgcctgttttctaaaataaagccATCTCTTCTCCTTTAACCCATTGCATGTAACTCATGCAAATAGAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28164065 536 - 130588469 CTCCTGCTCCACCTCCCTAGTTA-CTCCAAGCACACATCGTGGGCACCCACGTGCTCA--GTGCCACTCCCCCTCAGCCGTCCTCTCT----GCCCTCTTTGTGGAC--TGCCCACCGCAACAGGCCATCAGTGGGGCTTCCTGCCTCTGCCACCGGTGCTGGTGTCCTGGATCCTGCACCACTGCTGAGGGCTG-----------------------GGCATGGAATTTCTGCACTGTGCTCATCCTAAAACCCTAGAAGGCCCAGGCTGTGCTGGCTCTGTGGCCTGCT----------------------------------TTGGGGAGAATGT-----------------------------------------------------CCCATC---------------------------------TCTTGAC-----------CGTGACCTCCTAAGCAGCACTGCCTGAGTCCTGAGCCTCACACAGAGCCTCCTGAATATGGCTCTGCTTCTAGCCTGCACCCTTCTCCCCTGGAAACTGGAAACCCCGCCCTGAGGTAGGGGATGGAAGGAGCCTGG-----TCCATGCGTCTCCTTCCTCAGAA--TCATTTTTGTCTTTATCCACAGGGGCCTGTTTTCTAAAATAAAGCCATCTCTTCTCCTTTAACCCATTGCATGTAACTCATACAAATAGAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64626298 538 + 155834243 TTCCTGCTCCACCTCCCTAGTTACCTCTGAGCACATATGGCGGGCACCCGCATGCTCA-GGTGCCACCCACCCTCAGCCATCCTCTCTAGAGGCCCTGTCTGTGGAC--TGCCTACCCCAACAGGCCGTCAGTGGGGCCTCCTG--TCTGCCACCAGGGCTGGTGTCCCGGATCCTACACCTCTGCTCAGGGCTG-----------------------GGCGTGAAATTTCTGCACTGTGCTCCTCCTAAAACCCT-GAAGGACCAGGCTGTGCTGGATCTGTGGCCTGCT----------------------------------Ctggggagaatgc-----------------------------------------------------ccc---------------------------------------------tgggtgctagccgggcccctaagcagcactgcctgagtcctgagtctcgcacagagcctcctgaatatggctctgcttctggcctgcaTTATTCCTCGCTGGAAACTGGAAACCCCGCCCTGAAGTGGGGGATGGAAGGAGCCTGG-----TGCATGTGTCCCCTTCCTCAGCA--TCATCTTTGTCTTTACCCCCAGGCACCTCTTTTCTAAAATAAAGCCTTGTCTTCTCCTTTAACGCACTGTATTTAACTCATGCAAATAGAT i calJac3.chr7 C 0 C 0 s mm10.chr4 25426473 631 - 156508116 CTCTGGTTCCTGCTCCC-------TTCTGAGGGCCCACCGTGGGCGAGCACATGCTCGAGGCTCTGGCTTCACTCAGTTGTCTACTCG----GCCCTCCCCATGGGCTTTGCCC-----------CCTTCAG--------------------GTTGGAGATGAGATCTTGGATCCTCTGCCTCTGCTAAGGGCTGAGGCATGACTCATTGTCCAGTGTGGCCTGGAAGTTCTTCACTGTGTCTATACTGAAATC--AGAAGATTTCTGTGCTGCTAGGGCACTGGCCTGCTGGAAAATAGGGTTCGGaggggggagagggaggggctagggaggctgtgaagggaaaactgagaaaggggaagcatttgaaatgtaaaaaaaataaaaataaccaataaaaaaTGAGAAATAAGAGAAAATAGGGCTCTGTCTTGACTCTGAGGTCTGGGGGGACCCCTG------ACTGCTTAGGGACTTAGCCTC--------CCTC-------------TGCTTCTGGCCTCTACCCTTCTCTCTTTGAACCTGGGCACTACACCCTCAGGTAGAAGA---GAGTGCCTTAGATATATATATATATCTTCTACCTTGTCACTTCTCCCTTGTCCCTTATCCTTAGCATCTG-TCCCTGAAATAAAATCCTCTGTTCTCCCATAATGCAAGGCAGTCAACTAACAGAAACAGGC i mm10.chr4 I 1004 I 294 e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=177440.000000 s hg38.chr1_KI270760v1_alt 53353 80 + 109528 ACTTATGGGAGGAATGACACCTTATGCTGCATACCACAAGAACCTAAGCCCTAGTTCCTAGTCATTCAAAATACCTCTGc s panTro4.chr1 30489136 80 + 228333871 ACTTATGGGAGGAATGACACCTTATGCTGCATACCACAAGAACCTAAGCCCTAGTTCCTATTCATTCAAAATACCTCTGc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30077731 80 - 229942017 ACTTATGGAAGTAATGACACCTTATGCTACATGCCACAAGAACCTAAGCCCTAGTTCCTATTCGTTCAAAATACCTCTGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33373706 80 + 229590362 ACTTATGGGAGGAATAACACCTTATGCTGCACGCCAGGAGAACATGAGCCCTAGTTCCCATTCATTCAGAATACCTCTGc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29884936 80 - 227556264 ACTTATGGGAGGAATGACACCTTATGCTGCACGCCAGGAGAACATGAGCCCTAGTTCCCATTCATtcagaatacctctgc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32648559 80 + 220367699 ACTTACAGGAGGAATGACACCTTATGCTGCATGCCACGAGAACATGAGCCCTAGTTCCCATTCATTCAAAATACCTCTGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28164601 80 - 130588469 ACTTACGGGAGGAATGACACCTTATGCTGCATGCCATGAGAACATGAGCCCTAGCTCCCATTCATTCAAAATACCTCTGc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64626836 80 + 155834243 ACTTATGGAAGGAATGACACCTTACACTATATGCCATAGGAACCTGGGCCCTAGTTCCTAGTCAATCAAAATACCTCTGC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=200421.000000 s hg38.chr1_KI270760v1_alt 53433 112 + 109528 ctgttctacagatggagaaacaggctcagggagatggcccaagttgcccaagtttgcacagcagctaaggggtagggatggggcgagcaactgtccttacgcttccaaagat s panTro4.chr1 30489216 112 + 228333871 ctgttctacagatggagaaacaggctcagggagatggcccaagttgcccaagtttgcacagcagctaaggggtagggATGGGGTGAGCAACTGTCCTTACACTTCCAAAGAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30077811 112 - 229942017 CTGttttacagatggagaaacaggctcagggagatggcccaagttgcccaagtttgcatagcagctaaagggtagggatggggcgagcaactgtccttactctcCCAAAGAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33373786 112 + 229590362 ctgttttacagacgaagaaacaggctcagggagatgacccaagttgcccaactttgcgcagcagctaagaggaagggatggggcaagcaactgtccttatgcttccaaagat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29885016 112 - 227556264 ctgttttacagacgaagaaacaggctcagggagatgacccaagttgcccaactttgcgcagcagctaagaggaagggatggggcaagcaactgtccttatgcttccaaagat i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32648639 112 + 220367699 CTGTTTTACAGACGAAGAAACAGGCTCAGGGAGATGACCCAAGTTGCCCAACTTTGCACAGCAGCTAAGAGGTAGGGATGGGGCAAGCAACTGTCCTTATGCTTCCAAAGAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28164681 112 - 130588469 ctgttttatagaccaagaaacaggctcagggagatgacccaaattgcccaactttgcacagcagctaagaggtagggatggggcaagcaactgtccttatgcttccaaagat i chlSab2.chr20 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C e calJac3.chr7 64626916 0 + 155834243 C a score=692159.000000 s hg38.chr1_KI270760v1_alt 53545 321 + 109528 ctgtttccacCAATGCCACTTAACCTCTCCTGGGGAAGAACccttgaagacttgtgtttacctttaaagttcatgtgacatttgcaatctactccatcatgtctctgtcttgattctaatccaaaaacatattttatatcccttgccacctgagaccaaaagaaggaaaaaaaaactgcttattctgtagcttcatgtcctctctggtcccgacccccagc--------agggagccagccccaggttgaTGGTCCCAGAGGTACACACCACACTGTCTGTGGATCAGGGGAGAATGTGCCCGGAGCAGAGTAAGGCCAACTGACGTGC s panTro4.chr1 30489328 320 + 228333871 CTGTTTCCACCAATGCCACTTAACCTCTCCTGGGGAAGAACccttgaagacttgtgtttacctttaaagttcatgtgacatttgcaatctactccatcatgtctctgtcttgattctaatccaaaaacatattttatatcccttgccacctgagaccaaaagaaggaaaaaaaa-ctgcttattctgtaacttcatgtactctctggtcccgacccccagc--------agggagccagccccaggttgaTGGTCCCAGAGGTACACACCACACTGTCTGTGGATCAGGGGAGAATGTGCCCGGAGCAGAGTAAGGCCAACTGACCTGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30077923 319 - 229942017 CTGTTTCCACCAATGCCTCTTAACCTCTCCTGGGGAAGAACccttgaagacttgtgtttacctttaaagttcatgtgacatttgcaatctactccatcatatctctgtctcgattctaatccaaaaacatattttatatcccttgccacctgagaccaaaagaaagaaaaaaac-ctgcttattctgtagcttcatgtactctctggtgcagacccccagc--------agggagccagtcccaggttgaTGGTCCCAGAGGTACACACCACACTGTCTGT-CATCAGGGGAGAATGTGCCCGGAGCAGAGTAAGGCCAACTGACCTGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33373898 327 + 229590362 ctgtttccacCAGTGCCTCTTAACCTCTCCTGCGGAAGAACCCTTGAAGACTTGTGTTTACCTTT-AAGTTCATGGGACATTTGCAATCTGTTCCAACATATCTCTGTCTTGATTCTAATCCAGAAATATATTTTATATCCCTTGCCATCTGAGACCAAAAGAAGGGAAAAAAACCTGCTTATTCTGTAGCTTCATGTACTCTTCGGTGCCGACCCAAAGTCGAGTCAGAGGGAACTAGCTCCAGGTTGATGGTCCCAGAGGTACACACCACACTGTCTGTGGATC-GGGGAGAATGTGCCCGGAGCAGAGTAAGGCCAACTGACCTGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29885128 327 - 227556264 ctgtttccacCAGTGCCTCTTAACCTCTCCTGCGGAAGAACCCTTGAAGACTTGTGTTTACCTTT-AAGTTCATGGGACATTTGCAATCTGTTCCAACATATCTCTGTCTTGATTCTAATCCAGAAATATATTTTATATCCCTTGCCATCTGAGACCAAAAGAAGGGAAAAAAACCTGCTTATTCTGTAGCTTCATGTACTCTTCGGTGCCGACCCAAAGTTGAGTCAGAGGGAACTAGCTCCAGGTTGATGGTCCCAGAGGTACACACCACACTGTCTGTGGATC-GGGGAGAATGTGCCCGGAGCAGAGTAAGGCCAACTGACCTGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32648751 329 + 220367699 CTGTTTCCACCAGTGCCTCTTAACCTCTCCTGCGGAAGAACCCTTGAAGACTTGTGTTTACCTTTAAAGTTCATGGGACATTTGCAATCTGTTCCAACATATCTCTGTCTTGATTCTAATccagaaacatattttatatccCTTGCCATCTGAgaccaaaagaagggaaaaaaacctGCTTATTCTGTAGCTTCATGTACTCTCTGGTGCTCACCCAAAGTTGGGTCGGAGGGAGCCAGCCCCAGGTTGATGGTCCCAGAGGTACGCACCACACTGTCTGTGGATCAGGGGAGAATGTGCCCAGAGCAGCGTAAGGCCAACTGACCTGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28164793 310 - 130588469 ctgtttccacCAGTGCCTCTTAA------------------CCTTGAAGACTTGTGTTTACCTTTAAAGTTCATGGGACATTTGCAATCTGTTCCAACATATCTCTGTCTTGATTCTAATCCAGAAATATATTTTTTATCCCTTGCCATCTGAGACCAAAAGAAGGGGAAAAATCCTGCTT-TTCTGTAGCTTCATGTACTCTTCGGTGCCGACCCAAAGTTGGGTCGGAGGGAACCAGCTCCAGGTTGATGGTCCCAGAGGCACACACCACACTGTCTGTGGATCAGGGGAGAATGTGCCCAGAGCAGCGTAAGGCCAACTGACCCGC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64626916 306 + 155834243 CTGTTTCCGCCAATGCCTCTTAATCTCTCCAGGGGAAGAACccttgaagatttgtgttta------aagttcatgtgacatttgcaatcttctccatcatatctctgtcttgattctaatccaaaaac---------aTCCCTTGCCACCTGAGACCAAAAGAAGAGAAAAAAACCTGCTTATTCTGTAGCTTCATGTACGCTCTGCTGCAGACTCCCAGT--------GGGGAGCCAGCCCCAGGTTGATGGTCCCCGAGGTATACACCACACTGTCTGTGGATCGGGGGAGAATGTGCTCAGGGCAGAGTAAGGCCCGAGGACCTGC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998478 0 - 85426708 C a score=242660.000000 s hg38.chr1_KI270760v1_alt 53866 89 + 109528 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGGAGTATCTGGGATGTCATCTGCTGACAACAGGTGCAAAGAATGGGAAATT s panTro4.chr1 30489648 89 + 228333871 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGGAGAGTCTGGGATGTCATCTGCTGACAACAGGTGCAAAGAATGGGAAATT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30078242 89 - 229942017 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGGAGTGTCTGGGATGTCATCTGCTGACAACAGGTGCAAAGAATGGGAAATT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33374225 88 + 229590362 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGAAGTGCCT-AGATGTCATCTGCTGACAACCGGTGCAAAGAACAGGAACTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29885455 88 - 227556264 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGAAGTGCCT-AGATGTCATCTGCTGACAACCGGTGCAAAGAACAGGAACTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32649080 88 + 220367699 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGAAGTGCCT-GGATGTCATCTGCTGACAACAGGTGCAAAGAATGGGAACTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28165103 88 - 130588469 TGCTAGAGGCCCAGGAGAATCAGGCTTAAGGGGAAGAGGAAGTGCCT-GGATGTCATCTGCTGACAACAGGTGCAAAGAATGGGAACTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64627222 89 + 155834243 TGTTAGAGGCACAGGAGAATCAGGCTTAAGGGGAAGAGGGAGTGTCTGGGATGTCATCTGATGGCAACAGGTGCAAAGAACAGGAAATT i calJac3.chr7 C 0 C 0 s canFam3.chr2 14998478 88 - 85426708 TGTTAGAGGTTCAGGAGGATTAGGCTTAGGGGGGAGGGGGAGCGTCT-GGGTGTCACCTGCCAGCACCAAGGGCAGACACCCGGATATT i canFam3.chr2 C 0 I 5 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I a score=933060.000000 s hg38.chr1_KI270760v1_alt 53955 397 + 109528 ATCCTGGACTCTGACGTCTtgctgttgtttgaatgtgtcccccaaagttcatgtgttgaaaacttgacccctaatgcagcagtgttgggaggtggggttgaatagaaagaatagaat--agatgaggtcatgaggtctc-accctcacaaatgtattattgtcattatcttgggagtgggctagttatcgccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttataccctcttgcccttcctccctccaccatgggatgacacagcacaaagtccctca-----------------------------------ccagatgctagcaccttgatattggacttcccagcctccagaactgtgaggaataaatttcttttctttaaaaattacccagtattaacagtattttgt s panTro4.chr1 30489737 398 + 228333871 ATCCTGGACTCTGACGTCTtgctgttgtttgaatgtgtcccccaaagttcatgtgttgaaaacttaacccctaatgcagcagtgttgggaggtggggttgaatagaaagaatagaat--agatgaggtcatgaagtctctgccctcacaaatgtattattgtcattatcttgggagtgggctagttatctccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttacaccctcttgcccttcctccttccaccatgggatgacacagcacaaaggccctca-----------------------------------ccagatgctagcaccttgatattggacttcccagcctccagaactgtgagtaataaatttcttttctttataaattacccagtattaacagtattttgt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30078331 398 - 229942017 ATCCTGGACTCTGATGTCTtgctgtagtttgactgtgtcccccaaagttcatgtgttgaaaacttaacccctaatgcagcggtgttgggaggtggggttgaatagaaagaatagaat--agatgaggtcatgaggtctctgccctcacaaatgtattattgtcattatcttgggagtgggctagttattgccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttacaccctcttgcccttcctccttccactatgagatgacacagcacaaaggccctca-----------------------------------ccagacgctagcaccttgatattggacttcccagcctccagaactgtaaggaataaatttcttttctttataaattacccagtattaacagtattttgt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33374313 435 + 229590362 ATCCTGGACTCGGACATCTtgctgtggtttgaatgtgtcccccgaagttcacgtgttggaaacttcatccctaatgcagcggtgttgggaggtggggtcgaatagaaagaatagaatcaagatcaggtcatgaggtctctgccctcacgaatatattattgtcattatcttgggagtgggctagttatcgccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttacaccctcttgcccttcctccttccaccatgggatgacacagcacaaaggccctcactagatcctagcaccttgatattggacttctcagcctagatgctagcaccttgatattggacttctcagccttcagaactgtgaggaataaatttcttttctttataaactacccagtattaacagtattttgt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29885543 400 - 227556264 ATCCTGGACTCTGACATCTtgctgtggtttgaatgtgtcccccgaagttcacgtgttggaaacttcatccctaatgcagcggtgttgggaggtggggtcgaatagaaggaatagaatcaagatcaggtcatgaggtctctgccctcacgaatatattattgtcattatcttgggagtgggctagttatcgccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttacaccctcttgcccttcctccttccaccatgggatgacacagcacaaaggccctca-----------------------------------ctagatgctagcaccttgatattggacttctcagccttcagaactgtgaggaataaatttcttttctttataaactacccagtattaacagtattttgt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32649168 394 + 220367699 ATCCTGGACTCTGACATCTTGC--ttgtttgaatgtgtcccccaaagttcatgtgttggaaacttcaTCCCTAATGCagtggtgttgggaggtggggtcg-ATAGAAGGAATAGAAT--AGATCAGGTCATGAGGTCTCTGCCCTCACGAATGTATTATTGTCATTATCTTGGGAGTGAGCTAGTTATCGCCAGAGTGGGCTTGTTAGAAAAGTGAGTTCAGCCCCCACTTGCCCTCTTGCTCTTACACCCTCTtgccctt-ctccttccaccatgggatgacacagcacaaaggccctca-----------------------------------ccagatgctggcaccttgatattggacttcccagccttcagaactgtgaggaataaatttcttttctttataaactacccagtattaacagtattttgt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28165191 396 - 130588469 ATCCTGGACTCTGACATCTTGC--TTgtttgaatgtgtcccccgaagttcacgtgttggaaatttcatccctaatgcagtggtgttgggaggtggggtcgaatagaagcaatagaat--agatcaggtcatgaggtctctgccctcacgaatgtattattgtcattatcttgggagtgagctagttatcgccagagtgggcttgttagaaaagtgagttcagcccccacttgccctcttgctcttacaccctcttgcccttcctccttccaccatgggatgacacagcacaaaggccctca-----------------------------------ccagatgctagcaccttgatgttggacttctcagccttcagaactgtgaggaataaatttcttttctttataaactacccagtattaacagtattttgt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64627311 396 + 155834243 ATCCTGTACTCTGACATCTtgctgtagtttcaatgtgtcccccaaagttcatgtgttgaaaac--aatccccaatgcagcagtgttgggaggtggggtcaaatagaaataatagaat--agattaggtcatgaggtctctgcccgcacgaatgtattattgtcattatcttgggagtgggttagttaccaacagagtgggcttgttagaaaagtgagctcagcccccatttgccctcttgctcttacaccctcttgcccttcctccttccaccatgggatgacacagcatgaagatcctca-----------------------------------ccagatgctggcaccttgatattggacttcccagcctctggaaatgtgagaaataaatttcgtttctttataaagtacccagtactaacagtattttgt i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e canFam3.chr2 14998566 5 - 85426708 I a score=701487.000000 s hg38.chr1_KI270760v1_alt 54352 292 + 109528 tatagcaacacggaat-------agactaagacaCacctccattttacagacgggaaaactgaggcccagagagggaaggtga-ctgcccaaagtcagatgactctggtgacctacccagagaagtggtagctgaatccaggccagaatcagatctccttgcatgcagtccaggaatctttccTCC--------------ATGGAGGTCACACTTTTCCATCATCCAGGCTGAGCCCTGGGCCTTTGTGGTCTCGGTGATGCTG-----AACAAAGGCAGGCAGTTATGAGCTCTGTTCTTCAGGAACTCATGGGTCAG s panTro4.chr1 30490135 292 + 228333871 tatagcaacacagaac-------agactaagacaCacctccattttacagacgggaaaactgaggcccagagagggaaggtga-ctgcccaaagtcagatgactctggtgacctacccagagaagtggtagctgaatccaggccagaatcagatctccttgcatgcagtccaggaatctttccTCC--------------ATGGAGGTCACACTTTACCATCATCCATGCTGAGCCCTGGGCCTTGGTGGTCTCAGTGATGCTG-----AACAAAGGCAGGCAGTTATGAGCTCTGTTCTTCAGGAACTCATGGGTCAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30078729 292 - 229942017 tagagcaacacagaac-------agactaagacaCacctccattttacagacgggaaaactgaggcccagagagggaaggtga-ctgcccaaagtcagatgactCTGGTGACCTACCCAGAGAAGTGGTAGCTGAATCCAGGCCAGAATCAGATCTCCTCGTGTGCAGTCCAGGAATCTTTCCTCC--------------ACGGAGGTCACACTTTTCCATCACCCAGGCTGAGCCCTGGGCCTTGGTGGTCTCGGTGATGCTG-----AACAAAGGCAGGCAGTTATGAGCCCTGTTCTTCAGGAACTCATGGGTCAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33374748 280 + 229590362 tataacaacacagaac-------ggactatgacaCacctccattttacagatgggaaaactgagacccagagagggaaggtga-ctgcccaaagtcaggtgactctggtgacctacccagagaagtggtagct------------gaatcagatctccttgtgtgcagtccaggaatctttcTTCC--------------ATGGAGGTCATACTTTTCCATCACACAGGCTGAGCCCTGGGCCTTGGTGGTCTAGGTGATGCTG-----AACGAAGGCAGGCAGTTATGAGCTCTGTTCTTCAGGAACTCATGGGTCAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29885943 280 - 227556264 tataacaacacagaac-------ggactatgacacacctccattttacagatgggaaaactgagacccagagagggaaggtga-ctgcccaaagtcaggtgactctggtgacctacccagagaagtggtagct------------gaatcagatctccttgtgtgcagtccaggaatctttcTTCC--------------ATGGAGGTCATACTTTTCCATCACACAGGCTGAGCCCTGGGCCTTGGTGGTCTAGGTGATGCTG-----AACGAAGGCAGGCAGTTATAAGCTCTGTTCTTCAGGAACTCATGGGTCAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32649562 280 + 220367699 tataacaacaCAGAAC-------GGACTAAGACacacctccattttacagatgggaaaactgaggcccagagagggaaggtgA-CTGCCCAAAGTCAGGTGACTCTGGTGACCTACCCAGAGAAGTGGTAGCT------------GAATCAGATCTCCTTGTGTGCAGTCCAGGAATCTTTCCTCC--------------ATGGAGGCCACACTTTTCCATCACACAGGCTGAGCCCTGGGCCTTGGTGGTCTAGGTGATGCTG-----AACAAAGGCAGGCAGTTATGAGCTCTGTTCTTCAGGAACTCATGGGTcgg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28165587 280 - 130588469 tataacaacacagaac-------ggactatgacaCatctccattttacagatgggaaaactgaggcccagagagggaaggtga-ctgcccaaagtcaagtgactctggtgacctacccagagaagtggtagct------------gaatcagatctccttgtgtgcagtcccggaatctttcctcc--------------atggaggccacacttctccATCACACAGGCTGAGCCCTGGGCCTTGGTGGTCTAGGTGATGCCG-----AACAAAGGCAGGCAGTTATGAGCTCTGTTCTTCAGGAACTCATGGGTCGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64627707 271 + 155834243 tacagcaacacagaac-------agactaagaTGCACGTccagtttacagacaggaaaactggggcccagagagggaaggtgacctgcccaaagtc------------------tcccaga-aagggggagctgaatccaggccagaatcagatctccttgtgtgcagtccaggaatctttcctcc--------------acggaggccacactTTTCCATCACCCAGGCTGAGCCCTGGGCCTTGGTGACCTCGGTGACGCTG-----AGCAGAGGCAGGCAGTTATTTGCTCTG---TTCAGGAACTCCTAGGTCAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 14998571 292 - 85426708 TACAACACCAAGGAACATATCCTGGACtccgatgc--ctccattttctagatggggaaactgag-tctgaagagggaaggtgacctgctc--agtc------------------gctcagagaagtgacagccgaatgtgggccagaattgggtctcctcgtgcccagtccAGGAATCCTGAGTCCGTTGAGTCCAGAGTGTGGAGGCCACACTCCCTCGTC-CCCAGTCC---CTGTGCGCCTCAGTGGCCTTGCTGGTGCTGGTGTTGACCAGAAGGGGATGTTAAGGGCTCCATTCTCCCAGAGCCCACGGGTGGG i canFam3.chr2 I 5 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I a score=3856297.000000 s hg38.chr1_KI270760v1_alt 54644 2020 + 109528 GGCTGGGAGGGAGgggtggcagaaaagccagctccccaggtcctgttcagtcacctccttgctgtgtgacctcag---acagcagcaacctctctgagccggggtctcatcagctctgaaatagggacagt------tgtatatggtgaggacccagtggcatgc-----------agcttaccacagtgcccagtgagtgaacactcTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGAATTTTGTCAGCACAGTCATTCCTAGAGGCAGATTCAGGCTGGTAGAGGGGCTGGACAGAGCTTCAGAGCCAGGTGAGGGCTCATCTGGTTGGGGTCCAGGCAG--GCTTTATGGGGGAGGACGAGGCTGAGCCCTGAAGGGTGAACAGGCAGGGT---------GTTCAGC----------------------ATCAGAGAGG-----------------------------GGAGCAGGG-----GCTTCTCCGTGAGC-------------------------------------------------------------------------------------CAGGAGGC-----------------AGGAAGAGACCT-GCCCGAAGCTCAGCAGGACAGGGCCAGGCACAGCCGGGTAGCTGCTGGAAACACAGACAGGACCCGC------TACTGGCCCAGCTCCCGATATG-GCAGACCACGatctcatccactgctcacagcagccccgtgaggcaagcatcatga-cccaaggtgtacatggggaaactgaggttcagagaggttaaataactgcac---ccaGTGAAATGTTG--AGTCCAGTGCTCCATAAATGGTTGGTCTATGCTATTACTCTGATGAAGGAATAACAAGGGCCTTTGCTGGAGCTCCTACTGTATGCCTCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGTGGGTAGTATGCCCAGCTTGCTCTTCAGGCCAGAGAATATTTGGGAAAGGGTCTTATCTCGAGAGTTGCAGAGGACAGATTCTTTACCCTCATGAAAGTTCTTCTCTGTCTGGACTTCTGTTTTCTTAGCCAGACTAGGATGGGGAAAGGGAG-GTCAATCAAGAGGACAAGCCCAGACTGT-GGCCTACTGTGTGCTGGTGGAATTCACAGTTAGAGCTCAGTAAGCCCTGCCAAGCAGCCCAGGGAGGGAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACAAGCTCAGCAACAAAAGGAAACAGC-ACAGCGCACACAGCAGTGCTG-GGACTGCCTGGACCTGACTGTGG---------TCTGGGAGG-TCTGACTGCCCAGGGGGCTGGCCTCTGGGATC-----TTCTGACTCC----CTGTGAGGCCCATGTGT------GGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGCAGGTGGGGGACCAAAGTGTGCCTTGTAAGACAGGCAAGATCAGAGAGGAGCACGGGCTACGAA-AAAGAGGAGGAGCAAGGGACACACAGTCAGGCGGTGTCACAAACAACACACCTGGGCACACACAGAGACCAGCCAGGC------CCAGGGGCAGGGTGGAGATAAGATGCAGCCGAGTGCTAAGGACAGAAGGATGGCAAGCCTG---------------GCAAAGCCCTACTGAGGGTGCAGCCTCTGCCCTGGGGCTGGGAGGGCTGGGGAAGGGGGTCATCCCTGGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCGCATGGCTGGCCCAAGAGAGGCTTGATTCTCTCAGGAGGCTCTGTGGCCACTAGCAAGAGCTGAGGACCCCTCCCGGCATCCAGCAGCATCCTGGGGCCCTGGACAAAGCTAATTTGCTTCCTCCTT-------TTCTCCTCTCTCCCTCTCCCTGGCCT-----------------------------TGTGTGTGCACAGCTTGTGCAT-------GTGCTATGATCA----GACACAGCC-----AATATTAAATTACTCTGA--ATTGCAGGTTATTTTCGAGGCTTGATACTGTTTTCAGTGGTCTAGAGGCCA-----TCGTCGTGGGCCAGGCCTTGAACCTCGTCCTGTTCCTTGCTTCGCATCCACTGGTCTCCGAGCACTCACTGAACTCCTGGTCAGTGCTTGGTGCCCTGTGGTGCCGACTCCTTCATCCTTCCCAACCCAGTGTGCTGGGGACCACCACTGCGATTGTTTTCATAGTGAGGAA-TTTAGACTTGGAGGGCTGGGG-TCCTCTCTGGAGAAGGTGCTGGAGCAA s panTro4.chr1 30490427 2019 + 228333871 GGCTGGGAGGGAGgggtggcagcaaagccagctccccaggtcctgttcagtcacctccttgctgtgtgacctcag---acagcagcaacctctccgagccggggtctcatcagctctgaaatagggacagt------tgtatatggtgaggacccagtggcatac-----------agcttaccacagtgcccagcgagtgaacactcTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGAATTTTGTCAGCACAGTCATTCCTAGAGGCAGATTCAGGCTGGTAGAGGGGCTGGACAGAGCTTCAGAGCCAGGTGAGGGCTCATCTGGTTGGGGTCCAGGCAG--GCTTTATGGGGGAGGACGAGCCTGAGCCCTGAAGGGTGAACAGGCAGGGT---------GTTCAGC----------------------ATCAGAGAGG-----------------------------GGAGCAGGG-----GCTTCTCCGTGAGC-------------------------------------------------------------------------------------CAGGAGGC-----------------AGGAAGAGACCT-GCCCGAAGCTCAGCAGGACAGGGCCAGGCACAGCCGGGGAGCCGCTGGAAACACAGACAGGACCCAC------TACTGGCCCAGCTCCTGATATG-GCAGACcacgatctcatccactgctcacagcagccccgtgaggcaagcatcatga-cccaaggtgtacatggggaaactgaggttcagagaggttaaataactGCAC---CCAGTGAAATGTTG--AGTCCAGTGCTCCATAAATGGTTGGTCTATGCTATTACTCTGATGACGGAATAACAAGGGCCTTTGCTGGAGCTCCTACT-TATGCCTCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGTGCATAGTATGCCCAGCTTGCTCTTCAGGCCAGAGAATATTTGGGAAAGGGTCTTATCTCGAGAGTTGCAGAGGACAGATTCTTTACCCTCATGAAAGTTCCTCTCTGTCTGGACTTCTGTTTTCTTAGCCAGACTAGGATGGGGAAAGGGAG-GTCAATCAAGAGGACAAGCCCAGACTGT-GGCCTACTGTGTGCTGGCGGAATTCACAGTTAGAGCTCAGTAAGCCCTGCCAAGCAGCCCAGGGAGGGAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACAAGCTCAGCAACAAAAGGAAACAGC-ACAGCGCACACAGCAGTGCTG-GGACTGCCTGGACCTGACTGTGG---------TCTGGGAGG-TCTGACTGCCCAGGGGGCTGGCCTCTGGGATC-----TTCTGACTCC----CTATGAGGCCCATGTGT------GGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGCAGGTGGGGGACCAAAGTGTGCCTTGTAAGACAGGCAAGATCAGAGAGGAGCACGGGCTACGAA-AAAGAGGAGGAGCAAGGGACACACAGTCAGGCGGTATCACAAACAACACACCTGGGCACACACAGAGACCAGCCAGGC------GCAGGGGCAGGGTGGAGATAAGATGCAGCTGGGTGCTAAGGACAGAAGGCTGGCAAGCCTG---------------GCAAAGCCCTACTGAGGGTGCAGCCTCTGCCCTGGGGCTGGGAGGGCTGGGGAAGGGGGTCGTCCCTGGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCGCATGGCTGGCCCAAGAGAGGCTTGATTCTCTCAGGAGGCTCTGTGGCCACTAGCAAGAGCTGAGGACCCCTCCTGGCATCCAGCAGCATCCTGGGGCCCTGGACAAAGCTAAATTGCTTCCTCCTT-------TTCTCCTCTCTCCCTCTCCCTGGCCT-----------------------------TGTGTGTGCACAGCCTGCGCAT-------GTGCTATGATCA----GACACAGCC-----AATATTAAATTGCACTGA--ATTGCAGGTTATTTTAGAGGCTTGATACTGTTTTCAACGGTCCAGAGGCCA-----TCGTCGTGGGCCAGGCCTTGAACCTCGTCCTGTTCCTTGCTTCACATCCACTGGTCTCTGAGCACTCACTGAACTCCTGGCCAGTGCTTGGTGCCCTGTGGTGCCGACTCCTTCATCCTTCCCAACCCAGTGTGCTGGGGACCACCACTGCAATTGTTTTCTTAGTGAGGAA-TTTAGACGCAGAGGGCTGGGG-TCCTCTCTGGAGAAGGTGCTGGAGCAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30079021 1999 - 229942017 GGCTGGGAGGGAGGGGTGGCAGCAAAGCCAGCTCCCCAGGTCCTGTTCAGTCACCTCCTTGCTGTGT----------------------------GAGCCACGGTCTCATCAGCTCTGAAATAGGAACAGT------TGTATATGGTGAGAACCCAGTGGCATACAGCAAAGTGGGAGCTTAC--CAGTGCCCAGTGAGTGAACACTCTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGAATTTTGTCAGCACAGTCATTCCTAGAGGCAGAGTCAGGCTGGTAGAGGGGCTGGACAGAGCTTCAGAGCCAGGTGAGGGCTCATCTGGTTGGGGTCCAGGCAG--GCTTTATGGGGGAGGACAAGACTGAGCCCTGAAGGGTGGACAGACAGGGT---------GTTCAGC----------------------ATCCGAGAGG-----------------------------GGAGCAAGG-----GCTTCTCCATGAGC-------------------------------------------------------------------------------------CAGGAGGC-----------------AGGAAGAGACCT-GCCCAAAGCTCAGCAGGACAGGGCCAGGCACAGCCAGGGAGCCACTGGAAACATAGGCAGGACCTGC------TACTGGCCCAGCTCCTGATATG-GCAGAgcacgatctcatcgactgctcatagcagccccgtgaggcaagcatcatga-cccaaggcgtacatggggaaactgaggttcagagaggttaaataactGCAC---CCAGTGAAATGTTG--AGTCCAGTGCTCCATAAATGGTTGGTCTATGCTATTACTCTGATGAAGGAATAACAAGGGCCTTTGCT-GAGCTCCTACTGTGTGCCCCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGTGCATAGTATGCCCAGCTTGCTCTGGAGGCCAAGGAATATTTGGGAAAGGGTCTTATCTCGAGAGTTGCAGAGGACAGATTCTTTGCCCTCATGGAAGTTCCTCTCTGTCTGGACTTCTGTTTTCTTTGCCAGACTAGGATGGGGAAAGGGAG-GTCAATCAAGAGGACAAGCCCAGACTGA-GGCCTACTATGTGCTGGTGGAATTCATAGTTAGAGCTCAGTAAGCCCTGCCAAGCAGCCCAGGGAGGGAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACAAACTCAGCAAGGAGAGGAAACAGC-ACAGCGCACACAGCCGTGCTG-GGACTGCCTGGACCTGACCGTGG---------TCTGAGAGG-TCTGACTGCCCCGGGGGCTGGCCTCTGGGATC-----TTCTGACTCC----CTATGAGGACCATGTGT------GGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGCAGGTGGGGGACCAAAGTGTGCCTTGTAAGACAGGCAAGATCAGAGAGGAGCACGGGCTACGGG-AAAGAGGAGGAGCAAGGGATACACAGTCAGGCGGTGTCACA---AACACGCCTGGGCACACACAGAGACCAGCCAGGC------GCAGGAGCAGGGTGGAGACAAGATGCAGCCGGGTGCTAAGGACAGAAGGCTGGCAAAGCTG---------------GCAAAGCCCTACTGAGGGTGCAGCCTCTGCCCTGGGGCTGGAGGGGCTGGGGAAGGCGGTCGTCCCTGGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCGCATGGCTGGCCCAAGAGAGGCTTGATTCTCTCAGGGGGCTGTGTGGCCACTAGCAAGAGCTGAGGACCCCTCCTCGCATCCAGCAGCATCCTGGGGCCCTGGACAGAGCTAATTTGCTTCCTCCTT-------TTCTCCTCTCTCCCTCTCCTTGGCCT-----------------------------TGTGTGTGCACAGCCTGTGCAT-------GTGCTACGATCA----GATACAGCC-----AATATTAAATTGCGCTGA--ATTGCAGATTATTTTAGAGGCATGATACTGTTTTCAACGGTCCAGAGG-CA-----TCGTCGTGGGCCAGGCCTTGAACCTCGTCCTGTTCCTTGCTTCACATCCACTGGTCTCCGAGCACTCACTGAGCTCCTGGCCAGTGCTTGGTGCCCTGTGGTGCCGACTCCTTCATCCTTCCCAACCCAGTGTGGTGGGGCCCACCACTGCGATTGTTTTCATAGTGAGGAA-TTTAGACTCGGAGGGCTGGGG-TCCTCTCTGGAGAAGGTGCTAGAGCAA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33375028 2011 + 229590362 GGCTGGGAGGGAGGGGTGGCAGCAAagccagctccccaggtcctgttcagtcacctccttgctgtgtgatcttggccagcagcagcaacctctctgagctggggtctcatcagctctgaaatagggacagt------tgtagacggtgaggacccagtggcatgcagcaaagtgggagcttaccacagtgcccagtgagtgaacactcTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGCATTTTGTCATCACAGTCATTCCTAGAGGCAAATTCAGGCTGGTAGAGGGGCTGGACAGAGCTTCAGAGCCAGGTGAGGGTTCATCTGGTTggggttcaggcag--gctttatgggggaggccaaagctgagccctgaaggatggacaggCAGGGT---------GTTCAGC----------------------ATCCGAGAGG-----------------------------GGAGCAGGG-----GCTTCTCCATGAGC-------------------------------------------------------------------------------------CAGGAGGT-----------------GGGAAGACTCCT-GCCCGAAGCTCGGCAGCACAGGGCCGGGCACAGGCAGGGAGCCACTGGAAACACGGACAGGACCCGC------TGCTGGCCCAGCTCCTGATACG-GCAGACcatgatctcatcctctgctcgcagcagccccgtgaggcaagcatcatga-cccaaggcacacatggggaaactgaggctcagagaggttaagtaaATGCAC---CCAGTGAAATGTTG--AGCCCTGTGCTCCATAAATGGTTGGTCTATGCTATCACTCTGATGAAGGAATAACAAGGGCCTTTGCT-GAGCTCCTACTATGTGCCCCAAGGCAGAAGTAAAGGCTTTCCCAGGCCCATGTGTGTAATATGCCCAGCTTGCTCTGGAGGCCAAGGAATATTTGGGAAAGAGTCTTAACTCGAGAATCGCAGAGGACAGGTTCTTTTCCCTCATGAAATTTCCTCTCTGTCTGGACT--TGTTTTCCTTGCCAGACTAGGATGGGGGAAGGGGG-ATCAATCAAGAGGACAAGCC--GACTGA-GGCCTACTGTGTGCTGGTGGAATGCATAGTTAGAGCTCAGTAAGCCCTTTCAAGCAGCCCACGGGGACAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACACGCTCAGCAAGGAGAGGAAACAGC-ACAGCGCACACAGCCGCGCTG-GGACAGCCTGGACCTGACGGTGG---------TCTGGGAGG-TCTGACTGCCCCGGGGGCTGACCTCTGGTGTC-----TTCTGATTCC----CTATGAGGCCCATGTGTGGGGTGGGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGTAGGTGGGCGACCAAAGTGTGCCTTGAAAGACAGGCAAGATC-----------------------AGAGAGGAGGAGCAAGGGACACACAGTTAAGCGGTGTCACAAACACCATGCCTGGGCACAGGCAGACACCAGTCAGGTGCAGGGGCAGGGGCAGGGTGGAGACAAGATGCAGCTGGGTGCTAAGGACAGAAGGCTGGCAGGGCTG---------------GCAAAGCCCTACTGAGGGTGCGGCCTCTGCCCTGGGGCTGGGGGACCCGGGGAAGGCATTTGTCCCTGGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCACAT-----GCCCAAGAGAGGCTTGATTCTCTCAGGGGGCTCTGTGACCACTAGCAAGAGCTGAGGACCCCTCCTGGCATCCAGCAGCTTCCTGGGGCCCTGGACAAAGCCAATTTGCTTCCTCCT-----------CCCTCTCTCCCTTTCCTTGGCCT-----------------------------TGTATGTGCACAGCCTGTACAT-------GTGCTGTGATCA----GACACAGCC-----AATATTAAGTTGCACTGA--ACTGCAGATTATTTTAGAGGCATGATACTGTTTTCAATGGTCCAGAGGCCA-----TTGCCAGGGGCCAGGCCTTGAACCTCATCCTGTTCCTTCCTTCACATCCACTGTTCTCCGAGCACACACTGAGCTCCTGGCCAGTGCCTGGTGCCGTGTGGTGCCAACTCCTTCATCCTTCCCAACCCAGTGTGGTGGGGACCGCCACTGCGCTTGTTTTCGTAGTGAGGAA-TTTAGACTCAGAGGGCTGGGG-TCCCCTCTGGAGAAGGTGCTAGAGCAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29886223 2010 - 227556264 GGCTGGGAGGGAGGGGTGGCAGCAAAGCCAGCTCCCcaggtcctgttcagtcacctccttgctgtgtgatcttggccagcagcagcaacctctctgagctggggtctcatcagctctgaaatagggacagt------tgtagacggtgaggacccagtggcatgcagcaaagtgggagcttaccacagtgcccagtgagtgaacactcTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGCATTTTGTCATCACAGTCATTCCTAGAGGCAAATTCAGGCTGGTAGAGGGGCTGGACAGAGCTTCAGAGCCAGGTGAGGGTTCATCTGGTTGGGGTTCAGGCAG--GCTTTATGGGGGAGGCCAAAGCTGAGCCCTGAAGGATGGACAGGCAGGGT---------GTTCAGC----------------------ATCCGAGAGG-----------------------------GGAGCAGGG-----GCTTCTCCATGAGC-------------------------------------------------------------------------------------CAGGAGGT-----------------GGGAAGACTCCT-GCCCGAAGCTCGGCAGCACAGGGCCGGGCACAGGCAGGGAGCCACTGGAAACACGGACAGGACCCGC------TGCTGGCCCAGCTCCTGATATG-GCAGACcatgatctcatcctctgctcgcagcagccccgtgaggcaagcatcatga-cccaaggcacacatggggaaactgaggctcagagaggttaagtaaATGCAC---CCAGTGAAATGTTG--AGCCCTGTGCTCCATAAATGGTTGGTCTATGCTATCACTCTGATGAAGGAATAACAAGGGCCTTTGCT-GAGCTCCTACTATGTGCCCCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGTGTGTAATATGCCCAGCTTGCTCTGGAGGCCAAGGAATATTTGGGAAAGAGTCTTAACTCGAGAATCGCAGAGGACAGGTTCTTTTCCCTCATGAAATTTCCTCTCTGTCTGGACT--TGTTTTCCTTGCCAGACTAGGATGGGGGAAGGGGG-ATCAATCAAGAGGACAAGCC--GACTGA-GGCCTACTGTGTGCTGGTGGAATGCATAGTTAGAGCTCAGTAAGCCCTTTCAAGCAGCCCACGGAGACAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACACGCTCAGCAAGGAGAGGAAACAGC-ACAGCGCACACAGCCGCGCTG-GGACAGCCTGGACCTGACGGTGG---------TCTGGGAGG-TCTGACTGCCCCGGGGGCTGACCTCTGGTGTC-----TTCTGATTCC----CTATGAGGCCCATGTGTGGGGTGGGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGTAGGTGGGCGACCAAAGTGTGCCTTGAAAGACAGGCAAGATC-----------------------AGAGAGGAGGAGCAAGGGACACACAGTTAAGCGGTGTCACAAACACCATGCCTGGGCACAGGCAGACACCAGTCAGGTGCAGGGGCAGGGGCAGGGTGGAGACAAGATGCAGCTGGGTGCTAAGGACAGAAGGCTGGCAGGGCTG---------------GCAAAGCCCTACTGAGGGTGCGGCCTCTGCCCTGGGGCTGGGGGACCCGGGGAAGGCATTTGTCCCTGGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCACAT-----GCCCAAGAGAGGCTTGATTCTCTCAGGGGGCTCTGTGACCACTAGCAAGAGCTGAGGGCCCCTCCTGGCATCCAGCAGCTTCCTGGGGCCCTGGACAAAGCCAATTTGCTTCCTCCT-----------CCCTCTCTCCCTTTCCTTGGCCT-----------------------------TGTATGTGCACAGCCTGTACAT-------GTGCTGTGATCA----GACACAGCC-----AATATTAAGTTGCCCTGA--ACTGCAGATTATTTTAGAGGCATGATACTGTTTTCAATGGTCCAGAGGCCA-----TTGCCAGGGGCCAGGCCTTGAACCTCATCCTGTTCCTTCCTTCACATCCACTGTTCTCCGAGCACACACTGAGCTCCTGGCCAGTGCCTGGTGCCGTGTGGTGCCAACTCCTTCATCCTTCCCAACCCAGTGTGGTGGGGACCGCCACTGCGCTTGTTTTCGTAGTGAGGAA-TTTAGACTCAGAGGGCTGGGG-TCCCCTCTGGAGAAGGTGCTAGAGCAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32649842 2034 + 220367699 ggctgggagggagaggtggcaGCAAAGCCAGCTCCCCAGGTCCTGTTCAGTCACCTCCTTGCTGTGTGATCTCGGCCAGCAACAGCAACCTCTCTGAGCCGGGGTCTCATCAGCTCTGAAATAGGGACAGT------TGCATACGATGAGGACCCAGTGGCATGCAGCAAAGTGGGAGCTTACCACAGTGCCCAGTGAGTGAACACTCTGCAGAGTTCACCCAGGATTTTACTTATGGTTTTGCATTTTGTCATCACAGTCATTTCTAGAGGCAAATCCAGGCTGGTAGAGGGGCTGGATAGAGCTTCAGAGCCAGGTGAGGGTTCATCTGGTTGGGGTTCAGGCAG--GCTTTATGGGGGAGGCCAAAGCTGAGCCCTGAAGGATGGACAGGCAGGGT---------GTTCAGC----------------------ATCCGAGAGG-----------------------------GGAGCAGGG-----GCTTCTCCATGAGC-------------------------------------------------------------------------------------CAGGAGGT-----------------GGGAAGACTCCT-GCCCGAAGCTGGACAGGACAGGGCCGGGCACAGCCAGGGAGCCACTGGAAACACGGACAGGACCCAC------TGTTGGCCCAGCTCCTGATATG-GCAGACCACAATCTCATCCTCTACTCGCAGCAGCCCCGTGAGGCAAGCATCATGA-CCCAAGGcacacatggggaaactgaggctcacagaggttaGGTAAATGCAC---CCAGTGAAATGTTG--AGCCCCGTGCTCCATAAATGGTTGGTCTATGCTATTACTCTGATGAAGGAATAACAAGGGCCTTTGCT-GAGCTCCTACTGTGTGCCCCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGTGCATAGTATGCCCAGCTTGCTCTGGAGGCCAAGGAATATTTGGGAAAGGGTCTTAACTTGAGAATTGCAGAGGACAGGTTCTTTCCCCTCATGGAAGTTCCTCTCTGTCTGGACTTCTGTTTCCTTTGCCAGACTaggatgggggaagggggaaTCAATCAAGAGGACAAGCCCAGACTGA-GGCCTACTGTGTGCTGGTGGAATGCATAGTTAGAGCTCAGTAAGCCCTTCCAAGCAGCCCAGGGAGACAGCACTGTCACCCCTGCTTTGCTGATAGGGAAACACGCTCAGCAAGGAGAGGAAACAGC-ACAGCGCACACAGCCGCGCTG-GGACAGCCTGGACCTGACCGTGG---------TCTGGGAGG-TCTGACTGCCCCGGGGGCTGACCTCTGGTGTC-----TTCTGACTCC----CTATGAGGCCCATGTGT------GGGGTGGGACTAACTGGGAAGGGGA-CTTGCTGGAGCAGGTGAGGGACCAAAGTGTGCCTTGAAAGACAGGCAAGATCAGAGAGGAGCACGGGCtacaggaagagaggaggaaCAAGGGACCCACAG-TAAGCGGCGTCACAAACACCATGCCTGGGCACAGGCAGAGCCCAGCCAGGC------GCAGGGGCAGGGTGGAGACAAGATGCAGCTGGGTGCTAAGGACAGAAGGCTGGCAAGGCTG---------------GCAAAGCCCTACTGAGGGTGTGGCCTCTGCCCTGGGGCTGGGGGACCTGGGGAAGGCGTTTGTCCCTAGACCAGGAGCATCAGAGAGACCCCAGACTGAGCCCTCAGCACCACATGGCTGGCCCAAGAGAGGCTTGATTCTCTCAGGGGGCTCTGCGACCACTAGCAAGAGCTGAGGGCCCCTCCTGGCACCCAGCAGCTTCCTGGGGCCCTGGACAAAGCCAATttgcttcctcctt-------ttctcctctctccctttccttggcCT-----------------------------TGTATGTGCACAGCCTGTACAT-------GTGCTGTGATCA----GACACAGCC-----AATATTAAGTTCCACTGA--ACTACAGATTATTTTAGAGGCATGATACCATTTTCAGTGGTTCAGAGGCCA-----TTGCCATGGAGCAGGCCTTGAACCTCATCCTGTTCTTTCCTTCACATCCACTGTTCTCCGAGCACACACTGAGCTCCTGGCCAGTGCCTGGTGCCCTGTGGTGCCAACTCCTTCATCCTTCCCAACCCAGTGTGGTGGGGACCGCCACTGCGCTTGTTTTCGTAGTGAGGAA-TTTAGACTCAGAGGGCTGGGG-TCCCCTCTGGAGAAGGTGCTAGAGCAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28165867 2011 - 130588469 GGCTGGGAGGGAGGGGTGGCAGCAAAGCCAGCTCCCCTGGtcctgttcagtcacctccttgctgtgtgatctcggccagcagcagcaacctctctgagccagggtctcatcagctctgaaatagggacaat------tgtatatggtgaggacctagtggcatgcagcaaagtgggagcttaccacagtgcccagtgagtgaacactcTGCAGAGGTCACCCAGGATTTTACTTATGGTTTTGCATTTTGTCATCACAGTCATTCCTAGAGGCAAATTCAGGCTGGTAGAGGGACTGGACAGAGCTTCAGAGCCAGGTGAGGGTTCATCTAGTTGGGGTTCAGGCAG--GCTTTATGGGGGAGGCCGAGGCTGAGCCCTGAAGGATGGACAGGCAGGGT---------GTTCAGC----------------------ATCCGAGAGG-----------------------------GGATCAGGG-----GCTTCTCCATGAGC-------------------------------------------------------------------------------------CAGGAGGT-----------------GGGAAGACTCCT-ACCTGAAGCTCGGCAGCACAGGGCCAGGCACAGGCAGGGAGCCACTGGAAACACGGACAGGACCCGC------TGCTGGCCCAGCTCCTGATATG-GCAGACCACGatctcatccactgctcgcagcagccccatgaggcaagcatcatga-cccaaggcacacatggggaaactgaggctcagagaggttaagtaaATGCAC---CCAGTGAAATGTTG--AGCCCCGTGCTCCATAAATGGTTGGTCTATGCTATCACTCTGATGAAGGAATAACAAGGGCCTTTGCT-GAGCTCCTGCTGTGTGTCCCAAGGCAGAAGT-AAGGCTTTCCCAGGCCCATGGGCATAGTATGCCTAGCTTGCTCTGGAGGCCAAGGAATATTTGGGAAAGGATCTTAAATCGAGAATTGCAGAGGACAGGTTCTTTCCCCTCATGGAAGTTCCTCTCTGTCTGGACT--TGTTTTCCTTGCCAGACTAGGATGGGGGAAGGGGG-ATCAATCAAGAGGACAAGCCCAGACTGA-GGCCTACTGCGTGCTGGTGGAATGCATAGTTAGAGCTCAGTAAGCCCTTTCAAGCAGCCCAGGGAAACAGCACCGTCACCCCTGCTTTGCTGATAGGGAAACAAGCTCAGCAAGGAGAGGAAACAGC-ACAGCGCACACAGCCGTGCTG-GGACAGCCTGGACCTGACCGTGG---------TCTGGGAGG-TCTGACTGCCCCGGGCGCTGACCTCTGGAATC-----TTCTGACTCC----CTATGAGGCCCATGTGT------GGGGTAGGACTAACTGGGAAGGGGA-CTTGCTGGAGTAGGTGGGCGACCAAAGTGTGCCTTGAAAGACAGGCAAGATCAGAGAGGAGCACACCCTACAGGAAGAGAGGAGGAGCAAGGGACACACAGTCAAGCGGTGTCACAAACACCATGCCTGGGCACAGGCAGAGACCAGCCAGGC------GCAGGGGCAGGGTGGAGACAAGATGCAGCTGGGTGCTAAGGACAGAAGGCTGGCAGGGCTG---------------GCAAAGCCCTACTGAGGGTGCAGCCTCTGCCCTGGGGCTGGGGGACCCAGGGAAGGCGGTTGTCCCTGGACCAGGAGCATCAGAGAGACCCCAGACGGA---------------------GCCCAAGAGAGGCTTGATTCTCTCAGGGGGCTCTGTGACCACTAGCAAGAGCTGAGGGCCCCTCCTGGCATCCAGCAGCTTCCTGGGGCCCTGGACAAAGCTAATTTGCTTCCTCCTT-------TTCTCCTCTCTCCCTTTGCTTGGCCT-----------------------------TGTATGTGCACAGCCTGTACAT-------GTGCTGTGATCA----GACACAGCC-----AATATTAAGTTGCACTGA--ACTGCAGATTATTTTAGAGGCATGATACTGTTTTCAATGGTCCAGAGGCCA-----TTGCCATGGGCCAGGCCTTGAACCTCATCCTGTTCCTTCCTTCATATCCACTGTTCTCTGAGCCCCCACTGAGCTCCTGGCCAGTGCCTGGTGCCCTGTGGTGCCAACTCCTTCATCCTTCCCAACCCAGTGTGGTGGGGACCGCCACTGCGCTTGTTTTCGTAGTGAGGAA-TTTAGACTCAGAGGGCTGGGG-TCCCCTCTGGAGAAGGTGCTAGAACAA i chlSab2.chr20 C 0 C 0 s canFam3.chr2 14998863 2157 - 85426708 GGGCATGAGGGAGggg-----accaggccacctccccaggctctgctcagccacctccgggctgtgtgaccttga---gcagcaacaagctctctgagcccgggtcccatcagctctgaaacagggacagtaatagatgtggacggtgaggaccgagtgagatg-agctggaaaggcactgaccgcggtgcccagc-agtgaccgctcTACCTAGGTCCCCCTTTATTTTTCTTATGATCATGACTGTCATCCTCACGGTCACTCCTGGAGCCAGATTCAGGCTGCGGGAGGTTCTGGACCGAGCTTCAGATCCAGGTGA--GCTCACCTGGTGGGGGCTTGGGGAGCTGCACCTGAGGCAAGAACAAAA------TCTCAGAGCGgggcagccagggtggctcagtggtttagcgctgcctttggaccagggtgtgatcctggagacccgggatcgagtcccatgtcgggctcccggtgcatggagcctgcttctccctctgcctgcgtctctgcctctctctctttctatgtctctcatgaataaataaataaaatctttaaaaaaaTTATAAAAAAAATCTCAGAGCAGAGGGCAGAGGGGCCCAGTGTAGGGGGGGATGCCTCGCTTTGAGTGTGGCGGC-CAAAAACACTTGCAACCAGGGAACCGATGAAGATGCCCGTGTGACCCGCTAGAGATACGGGCCCGGCACCCGCCCTGTGCGGACCATGATCTCATCC-CTGCCCAGAGTAGTCATGGGAGG--AGAGTCAGAACCCCAAGGTACACA---GGGACCTGAACCTGGGAGAGGTTACATGACTGCACCATCCAGTGAACCAGTGTTAGCCCAACGCTCAACACATGGTCGGTGTGTGTTATTGTTCCAATGTGGGAATAACAAGGGGTCTTTGT-GAGCTCCCACTGTGTGCCGCAGAACA----C-AAAGGTTTCCCAGGGCCCCACACTCAGTAGACCCGGCTAGGTCTGGAAGCCACCGAGTATCTGGGAAAGAGTCATGACTAGAGGCTCACCAAAGACAGGCTCTCTCCCCTCGTGGAAAACTCTCTCTTCCTGACCT-CTGTTTCCTCATCCAGACTGGGCTGGAGGTGGGGCG-GT---------GGGCACACCCAGatcgagggcctactatgtgctggtagag-gcattgtcggatctcactgaaccctcct--gcagcccagggagggcttgccagcatccctgctttgcccatagggaaacaagctcagggaggaagcaaacctgctgtggagcacacagctggggtgaggagagccttcccctgaacctggTAAACCTGCTCTGGGAGGATCCACCTGCCCCTCG-GCTGGGCTCTTGATCCTCCATTCCTGACTCTCTGACTGTGAGGCCCGTGTTA------GGGG--AGACTGAGAGGAAGGGGGATCTTCCTGGAGGAGGTGGGAGATCAGGGTGGGTCCTGAAGGACAGGGAAAACC-----------------------A------------AGGGGAC---------------------------------GGGCACAGGCAGGGACTGGCCAGGT------TCAGAGACAGGCAGG------------GCCCGGGGCAGGGGAGATCAGGCTGGCAGGGCTGGGTGCGGGAGGGGCTGGGAGGGCCCGCAGAAGGTGCAGCTTCTGTCCTGGAGCCGGGGGACCC--GGAAGGTGGTGGTGCATGGGCCAGGAGCCTCAGAGAGAAGCTGGACTGAGCTTTCAGTGGGGCCTG----GCCTGAGAGAGGCTCCA-CCTCTCGGGGGCCACTATGGCC--------TGGCCGGGTCCCCTTCCAGGCATGGGGCAGCGTCCTGGGGCTCTGGACAAAGCTGGTTTGATCCCCCCATGCACACCTCTTCTGCACTCTGTCTGCCAGGCCTGGCTGGAAGCAATCAGAGGCAGCTGATACTGTAC-TGCACAGACTGTAGATCATCAGGGAGGCATGATCACACCGAAGTAGCCCCAAGAATACTAGAGTGGAGAGGTTGTTATAGACACGTCCAGCCACACGTTAATTCGTTTACCAGGCTGCATATCACGCACCCACCATGCACCAGGCACTGAGCTGCACCCTGCTTCTTTCCCTGCAACCACCACCATC----------CTGGCCGCCAGACATGTGCTCTGTG------GGTGC---TCCCTCCATTCTCCAGTGccc--tggaggggaggccactcttaacctcgttttactagtgaggagttttagactcagggGCCTGGGGTTCCTCTCCAAGGAA--TGCTGGAACA- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e calJac3.chr7 64627978 0 + 155834243 C a score=477228.000000 s hg38.chr1_KI270760v1_alt 56664 199 + 109528 GGCTGGAGAGAAGACA-TGGTTGGTGGGGTTAGGAGGGAGTGTGGAGAGAGAG------GACA---TGGCTCCAAAGGAG-CAGAGCTCCTGGTCTCAGACAGTCCCATCAGACCATCCCCA--GCCCACCAGCCCTCCACTGCAGGACCCACACCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAGGGTCTGGCCCAGGCACTTGTTAGA s panTro4.chr1 30492446 199 + 228333871 GGCTGGAGAGAAGACA-TGGTTGGTGGGGTTAGGAGGGAGTGTGGAGAGAGAG------GACA---TGGGTCCAAAGGAG-CAGAGCTCCTGGTCTCAGACAGTCCCATCAGACCATCCCCA--GCCCACCAGCCCTCCACTGCAGGACCCACACCTCCTCTGGCCCAGTCTCTGCCTGCAGGGT-AAGGGTCTGGCCCAGGCACTTGTTAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081020 199 - 229942017 GGCTGGAGAGAAGACG-TGGTTGGTGGGGTTAGGAGGGAGTGTGGAGAGAGAG------GACA---CGGCTCCAAAGGAG-CAGAGCTCCTGGTCTCAGATCGTCCCATCAGACCATCCCCA--GCCCACCAGCCCTCCACTGCAGGACCCACACCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAGAGTCTGGCCCAGGCACCTGTTAGA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33377039 199 + 229590362 GGCTGGAGAGAAGACA-TGGTTGGTGGGGTTAGGAGGGAATGCAGAGAGAGAG------GGCA---CGGCTCCAAAGAAG-CAGAGCTCCTGGTCTCAGTCCGTCCCTCCAGACCATCCCCA--GCCCGCCAGCCCTCCACTGCAGGACCCACCCCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAGGGTCTGGCCCAGGCACTTGTTAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29888233 199 - 227556264 GGCTGGAGAGAAGACA-TGGTTGGTGGGGTTAGGAGGGAATGCAGAGAGAGAG------GGCA---CGGCTCCAAAGAAG-CAGAGCTCCTGGTCTCAGTCCGTCCCTCCAGACCATCCCCA--GCCCGCCAGCCCTCCACTGCAGGACCCACCCCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAGGGTCTGGCCCAGGCACTTGTTAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32651876 199 + 220367699 GGCTGGAGAGAAGACG-TGGTTGGTGGGGTTAGGAGGGAATGCGGAGAGAGAG------GGCA---CGGCTCCAAAGAAG-CAGAGCTCCTGGTCTCAGTCCGTCCCTCCAGACCATCCCCA--GCCCACCAGCCTGCCACTGCAGGACCCACCCCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAGGGTCTGGCCCAGGCACTTGTTAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28167878 202 - 130588469 TGCTGGAGAGAAGACA-TGGTTGGTGGGGTTAGGAGGGAATGCGGAGAGAGAG------GGCACGGCGGCTCCAAAGGAG-CAGAGCTCCTGGTCTCAGTCCATCCCTCCAGACCATCCCCA--GCCCACCAGCCCTCCGCTGCAGGACCCACCCCTCCTCTGGCCCAGTCCCTGCCTGCAGGGT-AAAGGTCTGGCCCAGGCACTTGTTAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64627978 186 + 155834243 GGTTGGCGAGTAGACAGTGGTTGGTGGGG-TAGGAGGGAGTGCAGAGAGAGAC------GGCG---TGGCTCCAAAGGAGCCAGCACTCCTGGCCTCAGACCATCCCT-------ACCTCCA--GCCCACCAGCCCTCCACTGAGGGACCCAGCCCTCCTCTGGCCCAGCCTCTGCCTGCAGAAT-AAGGGTCT-------GCACTTGTGAGT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15001020 178 - 85426708 GTCTGGGGAGCAGACA------GGGAGGACCCATAAGTGCAGCAGGGAGAGGGTGACCAGGCC---TGGCTCCAAAGGGA-CAGATCCCCCTGCTCCAGACTCCCCCTGCA------CCCCAGGGCCTGCCAGGCCTCCA-----------------CCTCTGGCCCAGTC-CTGCCTGCAGTGTCAAGAGTCTAG-ACAGGTACTTGTGGGG i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I a score=51950.000000 s hg38.chr1_KI270760v1_alt 56863 24 + 109528 GTTAAGCTAGGGACAAACCTGGAG s panTro4.chr1 30492645 24 + 228333871 GTTAAGCTAGGGACAAACCTGGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081219 24 - 229942017 GTTAAGCTGAGGACAAACCTGGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33377238 24 + 229590362 GTTAAGCTGGGGACAAACCTGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29888432 24 - 227556264 GTTAAGCTGGGGACAAACCTGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652075 24 + 220367699 GTTAAGCTGGGGACACACCTGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28168080 24 - 130588469 GTTAAGCTGGGGACAAACCTGGAG i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15001198 23 - 85426708 GTTGTGCTGGGAACA-ATCTGGAA i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 490293 24318 - 28733288 I e calJac3.chr7 64628164 0 + 155834243 C a score=790855.000000 s hg38.chr1_KI270760v1_alt 56887 357 + 109528 GAGGGAGGGACAGAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTAGAAAATCAAACCTTCCCTCCTAGGTCCTGGGTGGCCCTTCCCTCC-----TAGGTCCTGG-GTGGCCCCTCCCACTGGG-CCTGTCTGTCTGCCC-----CCGCCCCACTTTCAGGGGCTCCCGCTGGTTTTCTTCCATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGCCTGGCCCACTGAGGAGCTGCTGCCCAGAGTGGAGCCGGGTCTcagaggcagtgggga-gga-cagggacagaggccagaagccagc-----------ggGGAGGAC-------------TGTGTGTGTATCAGAGAAAGA s panTro4.chr1 30492669 357 + 228333871 GAGGGAGGGACAGAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTTGAAAATCAAACCTTCTCTCCTAGGTCCTGGGTGACCCTTCCCTCC-----TAGGTCCTGG-GTGGCCCCTCCCACTGGG-CCTGTCTGTCTGCCC-----CCGCCCCACTTTCAGGGGCTCCCGCTGGTTTCCTTCTATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGCCTGGCCCACTGAGGAGCTGCTGCCCAGGGTGGAGCCGGGTCTCAGAGGCAGTGGGGA-GGA-CAGGGACAGAGGCCAGAAGCCAGC-----------GGGGAGGAT-------------TGTGTGTGTATCAGAGAAAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081243 332 - 229942017 GAGGGAGGGACAGAGGAGGGAGCTGCCAGGTTGTG-GGAGGAGCCACAAAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTTGAAAATCAAA-------------------------CCTTCCCTCC-----TAGGTCCTGG-GAGGCCCCTCCCACTGGA-CCTGTCTGTCTGCCC-----CCGCCCCACTTTCAGGGGCTTCCGCTGGTTTCCTTCTATCCTTGGGCCTGATCTGAGCAGATGCCTGGAGCCTGGCCCACTGAGGAGCTGCTGCCCGGAGTGGAGCCGGGTCTCAGAGGCAGTGGGGA-GGA-CAGGGACAGAGGCCAGAAGCCAGC-----------GGGGAGGAC-------------TGTGTGTGTATCAGAGAAAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 514611 346 - 28733288 GAGGGAG-------GGAGGGAGGTGCCCGCCAGTGAGAAGGAACAAGAAAACACTTAAAGTAAAACATGGACTATGCCTTTAGCTTTGAAAATCCAA------------------------ACCTTCCCTGCAGGTTCAGGTCCAGGCCAGGACGCTCCCGCTGGGTTCTGGCTCTGTCCCT-----GCTCCCCGCACTCAGGGGCCCTTCCTCGG---CTTCTGTGTCTGGGCCAGAGCAAAATAGACACCTGGAACCCGGCCAGCCCCCGGGTTGCTGCCCAGAGAAgggccagg-cgcccaggcagtggcaagggg-ctaggagaggggccaggagccagt-----------ggGGAAGAtgtgcgtgtgtgtgtgtgtgtgtgtgagagagaga i nomLeu3.chr24 I 24318 I 57 s rheMac3.chr1 33377262 332 + 229590362 GAGGGAGGAACACAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTTGAAAATCAAA-------------------------CCTTCCCTCC-----CAAGTCCTGG-GCGGCCCCTCCCACTGGG-CCTGTCTCTCTGCCC-----CCACCCCACTTTCAGGGGCTCCCGCTGGTTTCCTTCTATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGGCTGGCCCACTGAGGAGCTGCTGCCCAGAATGGAGCCGAGTCTCAGAGGGAGTGGGGA-CGA-CAGGGACAGAGGCCAGAAGCCAGC-----------GGGAAAGAC-------------TGTGTGTGTATCAGAGAAAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29888456 332 - 227556264 GAGGGAGGAACACAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTTGAAAATCAAA-------------------------CCTTCCCTCC-----CAAGTCCTGG-GCAGCCCCTCCCACTGGG-CCTGTCTCTCTGCCC-----CCACCCCACTTTCAGGGGCTCCCGCTGGTTTCCTTCTATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGGCTGGCCCACTGAGGAGCTGCTGCCCAGAATGGAgccgagtctcagaggcagtgggga-gga-cagggacagaggccagaagccagc-----------ggGAAAGAC-------------TGTGTGTGTATCAGAGAAAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652099 332 + 220367699 GAGGGAGGAACAGAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCaacattaaatgcccac-aagccTGT-GCTTTGAAAATCAAA-------------------------CCTTCCCTTC-----CAAGTCCTGG-GCGGCCCCTCCCACTGGG-CCTGTCTCTCTGCCC-----CCGCCCCACTTGCAGGGGCTCCCGCTGGTTTCCTTCTATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGGCCGGCCCACTGAGGAGCGGCTGCCCAGAATGGAGCCGAGTCTCAGAGGCAGTGGGGA-GGA-CAGGGACAGAGGCCAGAAGCCAGC-----------GGGAAAGAC-------------TGTGTGTGTAtcagagaaaga i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28168104 332 - 130588469 GAGGGAGGAACAGAGGAGGGAGATGCCAGGCTGTG-GGAGGAGCCACAGAATGGTCAACATTAAATGCCCAC-AAGCCTGT-GCTTTGAAAATCAAA-------------------------CCTTCCCTCC-----CAAGTCCTGG-GCGGCCCCTCCCACTGGG-CCTGTATCTCTGCCC-----CCGCCCCACTTTCAGGGGCTCCCGCTGGTTTCCGTCTATCCTTGGGCCAGATCTGAGCAGATGCCTGGAGGCTGGCCCACTGAAGAGTGGCTGCCCAGAATGGAgccgagtctcagaggcagtgggga-gga-cagggacagaggccagaagccagc-----------ggGAAAGAC-------------TGTGTGTGTATCAGAGAAAGA i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15001221 343 - 85426708 GAAGAAGGCAAAGAGGAGGGAGATAGGAGGCTGTG-GATGAAGCCAGAGAACATTCAGGATTAAACGCCCAC-AAGCTTGT-GCTTTGAAAATTAGA-------------------------CTCTCCCTTC-----CAGGGCCAGG-GTGGCCCCTCCCGCTGGT-CCTGGCTCTCTGCCCCTCCTCTTCCCCACATGCAGGGGCTTTTGCTGCGTT---TCTGTCCCTGGTCCAGCCCCTCACAGATGCCTGGAGCCTGGCCTGCTGAGGGGCTGCTGCCCAGAGCTGAGCCTTGTCTGTGAGGCAGTAGGAA-GGAGCTGGGACAGGGCCCAGATGCCAGCGTTGGGGGGTGGGGGGGTGC-------------TGGATGCATGTAAGTGCA--- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e calJac3.chr7 64628164 0 + 155834243 C a score=314568.000000 s hg38.chr1_KI270760v1_alt 57244 190 + 109528 CACACACACAGAGATCAGAGAAACCAACAGTTCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATGAGGAAAAATAGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAGGCAGAGATGATGTGAAGCCTAGGCAAAGCGAGAGC-CTGAGCTAGAACACGAGACTCAAAAGAGAA-----------------------------------------------------------------------------------------------CT s panTro4.chr1 30493026 190 + 228333871 CACACACACAGGGATCAGAGAAACCAACAGTTCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATGAGGAAAAATAGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAGGCAGAGATGATGTGAAGCCTAGGCAAAGCGAGAGC-CTGAGCTAGAACACGAGACTCAAAAGAGAA-----------------------------------------------------------------------------------------------CT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081575 285 - 229942017 CACACGCACAGAGATCAGAGAAACCAACAGTTCAAGAGGGACTCAAAGGGAGCAGAGAGTGAATCAACAATGAGGAAAAATAGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAGGCAGAGATGATGTGAAGCCTAGGCAAAGCGAGAGC-CTGAGCTAGAACACAAGACTCAAAAGAGAACTCgagagaggtagtgagaggagagaaaagtgagaaacagagagagggagaaaacacagcaatgagaaaaagagagaTGGGCCCACTAGCGGAGGCT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33377594 190 + 229590362 CACACACAGAGAGATCAGAGAAACCAACATTCCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATAAGGAAAAAAGGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAAGCAGATATGACATGAAGCCTGGGCAAAGCAAGAGC-CTGAGCTAAAACACGAGACTCAAAAGAGAA-----------------------------------------------------------------------------------------------CT i rheMac3.chr1 C 0 I 95 s macFas5.chr1 29888788 190 - 227556264 CACACACAGAGAGATCAGAGAAACCAACATTCCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATAAGGAAAAAAGGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAAGCAGATATGACATGAAGCCTGGGCAAAGCAAGAGC-CTGAGCTAAAACACGAGACTCGAAAGAGAA-----------------------------------------------------------------------------------------------CT i macFas5.chr1 C 0 I 95 s papAnu2.chr1 32652431 190 + 220367699 cacacacagagagatcaGAGAAACCAACATTCCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATaaggaaaaaaggagacagagaatagattagaataaaagaaacacagagaaaagcagATATGACATGAAGCCTGGGCAAAGCAAGAGC-CTGAGCTAAAACAcgagactcgaaagagaa-----------------------------------------------------------------------------------------------ct i papAnu2.chr1 C 0 I 95 s chlSab2.chr20 28168436 190 - 130588469 CACACACAGAGAGATCAGAGAAACCAACATTCCAAGAGGGACTCAAGGGGAGCAGAGAGTGAATCAACAATAAGGAAAAAAAGAGACAGAGAATAGATTAGAATAAAAGAAACACAGAGAAAGGCAGATATGACGTGAAGCCTGGGCAAAGTGAGAGC-CTGAGCTAAAACACGAGACTCAAAAGAGAA-----------------------------------------------------------------------------------------------CT i chlSab2.chr20 C 0 I 99 s canFam3.chr2 15001564 121 - 85426708 TACACATGTGACAAGGAGGGAAGTGCACAATTGCACATGCATT----------------TGCACTCACAG-----------GGAGACAAAGATCAG-------------------AGAGAGATGGAGAGA---------------------CAAGAACTCTGATGGAGGCCAAGAGACCCCAGCAGGA-------------------------------------------------------------------------------------------------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e calJac3.chr7 64628164 0 + 155834243 C a score=3737.000000 s hg38.chr1_KI270760v1_alt 57434 4 + 109528 GCGC s panTro4.chr1 30493216 4 + 228333871 GCAC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081860 4 - 229942017 GCAC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33377879 4 + 229590362 GCGT i rheMac3.chr1 I 95 C 0 s macFas5.chr1 29889073 4 - 227556264 GCGT i macFas5.chr1 I 95 C 0 s papAnu2.chr1 32652716 4 + 220367699 GCGT i papAnu2.chr1 I 95 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001685 0 - 85426708 C e calJac3.chr7 64628164 0 + 155834243 C e chlSab2.chr20 28168626 99 - 130588469 I a score=250206.000000 s hg38.chr1_KI270760v1_alt 57438 128 + 109528 CACCTGGGAGGGAGGGAGAGGA-AGGGCCTTGAGGGTCACAAGGAGAGACAGAGCCCATCCTTAGGAGCAGATGGGCAGTGGGGTGGGA--GCCAGGCCTGCCAGTGGGGATCCGGCCAGAGAGAGAGGTG s panTro4.chr1 30493220 128 + 228333871 CACCTGGGAGGGAGGGAGAGGA-AGGGCCTTGAGGGTCACAAGGAGAGACAGAGCCCATCCTTAGGAGCAGATGGGCAGTGGGGTGGAA--GACAGGCCTGCCAGTGGGGATCCGGCCAGAGAGAGAGGTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081864 128 - 229942017 CACCTGGGAGGGAGGGAGAGGA-AGGGCCTTGAGGGTCACGAGGAGAGACAGAGCCCATCCTTAAGAGCAGGTGGGCAGTGGGGTGGGA--GCCAGGCCTGCCAGTGGGGATCCGGCCAGAGAGAGAGGTG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33377883 126 + 229590362 CACCTGGGAGGGAAGGAGAGGA-AGGGCCTTGAGGGGCACAAGGAGAGACAGAGCCCATCCTTAGGAGCAGATGGGCAGTGGGGTGGGA--GCCAGGCCAGGCAGTGGGGAT--CGCCAGAGAGAGAGGTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889077 126 - 227556264 CACCTGGGAGGGAAGGAGAGGA-AGGGCCTTGAGGGGCACAAGGAGAGACAGAGCCCATCCTTAGGAGCAGATGGGCAGTGGGGTGTGA--GCCAGGCCAGGCAGTGGGGAT--CGCCAGAGAGAGAGGTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652720 128 + 220367699 Cacctgggagggaaggagagga-agggccTTGAGGGGCACAAGGAGAGACAGAGCCCATCCTTAGGAGCAGATGGGCAGTGGGGTGGGA--GCCAGGCCAGCCAGTGGGGATCCCGCCAGAGAGAGAGGTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28168725 128 - 130588469 CACCTGGGAGGGAGGGAGAGGA-AGGGCCTTGAGGGGCACAAGGAGAGACAGAGCGCAGCCTTAGGAGCAGATGGGCAGTGGTGTGGGA--GCCAGGCCAGCCAGTGGGGATCCCGCCAGAGAGAGAGGTG i chlSab2.chr20 I 99 C 0 s canFam3.chr2 15001685 120 - 85426708 -----GAAAGGATGGCAGGGGACAGGGTCCTGAG---CCCAGGGAGACACAGAAGC---CCCCAGAGGTGGAAAGGCAGGGAGGAGGGGTTGCCAGGCCCGGAGGTGACAGGGCCACCAGGAAGGCAGGTG i canFam3.chr2 C 0 I 579 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e calJac3.chr7 64628164 0 + 155834243 C a score=102723.000000 s hg38.chr1_KI270760v1_alt 57566 58 + 109528 GAGCCCAGGCTGGAGCAGCAAGGTCAGCAGAGGAAGGCTCCTCAACAGCTGGGGGGCC s panTro4.chr1 30493348 58 + 228333871 GAGCCCAGGCTGGAGCAGCAAGGTCAGCAGAGGAAGGCTCCTCAACAGCTGGGGGGCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30081992 58 - 229942017 TAGCCCAGGCTGGAGCAGCAAGGTCAGCAGAGGACGGCTCCTCAACAGCTGGGGGGCC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33378009 57 + 229590362 GAGCCCAGGCTGGAGCAGCAAGGCCAGCAGGGGAAGGCTCCGCAACAGCT-GGGGGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889203 57 - 227556264 GAGCCCAGGCTGGAGCAGCAAGGCCAGCAGGGGAAGGCTCCGCAACAGCT-GGGGGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652848 57 + 220367699 GAGTCCAGGCTGGAGCAGCAAGGCCAGCAGGGGAAGGCTCCGCAACAGCT-GGGGGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28168853 57 - 130588469 GAGCCCAGGCTGGAGCAGCAAGGCCAGCAGGGGAAGGCTCCGCAACAGCT-GGGGGCC i chlSab2.chr20 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I e calJac3.chr7 64628164 0 + 155834243 C a score=68170.000000 s hg38.chr1_KI270760v1_alt 57624 29 + 109528 GTGAACTGTGGGTGCACCCAGCCTGCGCA s panTro4.chr1 30493406 29 + 228333871 ATGAACTGTGGGTGCACCCAGCCTGCGCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30082050 29 - 229942017 ATGAACTGTGGGTGCACCCAGCCTGCGCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33378066 29 + 229590362 ATGAACTGTGGGTGCACCCAGCCTGCACA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889260 29 - 227556264 ATGAACTGTGGGTGCACCCAGCCTGCACA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652905 29 + 220367699 ATGAACTGTGGGTGCACCCAGCCTGCACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28168910 29 - 130588469 ATGAACTGTGGGTGCACCCAGCCTGCACA i chlSab2.chr20 C 0 I 700 s calJac3.chr7 64628164 29 + 155834243 GTGTGCTGTGGGTGTGCCCAGCCCGCATG i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=79853.000000 s hg38.chr1_KI270760v1_alt 57653 34 + 109528 GGCACCTACACAAATGTGCTTTGTGAGTGTGTGC s panTro4.chr1 30493435 34 + 228333871 GGCACCTACACAAATGTGCTTTGTGAGTGTGTGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30082079 34 - 229942017 GGCACCTACACAAATGTGCTTTGTGAGTGTGTGC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33378095 34 + 229590362 GGCACCTACATGAATGTGCTTTGTGAGTGTGTGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889289 34 - 227556264 GGCACCTACATGAATGTGCTTTGTGAGTGTGTGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32652934 34 + 220367699 GGCACCTACATGAATGTGCTTTGTGAGTGTGTGC i papAnu2.chr1 C 0 I 392 s chlSab2.chr20 28169639 34 - 130588469 GGCACCTGCACGAGTGTGCTTTGTGAGTGTGTGT i chlSab2.chr20 I 700 C 0 s calJac3.chr7 64628193 34 + 155834243 GGCACCTGGATGAGTGTACTTTGCGAGTGTGTGC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=13555.000000 s hg38.chr1_KI270760v1_alt 57687 7 + 109528 CGTGGGA s panTro4.chr1 30493469 7 + 228333871 CGTGGGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30082113 7 - 229942017 TGTGGGA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33378129 7 + 229590362 TGTGGGC i rheMac3.chr1 C 0 I 591 s macFas5.chr1 29889323 7 - 227556264 TGTGGGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653360 7 + 220367699 TGTGGGT i papAnu2.chr1 I 392 C 0 s chlSab2.chr20 28169673 7 - 130588469 TGTGGGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628227 7 + 155834243 TGTGGGC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=1964.000000 s hg38.chr1_KI270760v1_alt 57694 2 + 109528 GT s panTro4.chr1 30493476 2 + 228333871 GT i panTro4.chr1 C 0 I 517 s ponAbe2.chr1 30082120 2 - 229942017 GT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33378727 2 + 229590362 GC i rheMac3.chr1 I 591 C 0 s macFas5.chr1 29889330 2 - 227556264 AT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653367 2 + 220367699 GC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169680 2 - 130588469 GC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628234 2 + 155834243 AT i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=2800.000000 s hg38.chr1_KI270760v1_alt 57696 1 + 109528 G s panTro4.chr1 30493995 1 + 228333871 G i panTro4.chr1 I 517 C 0 s ponAbe2.chr1 30082122 1 - 229942017 G i ponAbe2.chr1 C 0 I 503 s rheMac3.chr1 33378729 1 + 229590362 G i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889332 1 - 227556264 G i macFas5.chr1 C 0 I 648 s papAnu2.chr1 32653369 1 + 220367699 G i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169682 1 - 130588469 G i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628236 1 + 155834243 G i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=472594.000000 s hg38.chr1_KI270760v1_alt 57697 199 + 109528 CCCAGCAGTGCGTAAGTAAGTGGTGTGTGCCTATGTTAGTCAGTGCACGCGGTGTGAGTGTTGTGTGTGTATCTCCACCTCCCCTATTTTGCCTGTAACCATTGCCAGGCCCTCTCTGCTTCTGAG------TCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGATCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGGCCTC s panTro4.chr1 30493996 205 + 228333871 CCCAGCAGTGCATAAGTAAGTGGTGTGTGCCTATGTTAGTCAGTGCACGCAGTGTGAGTGTTGTGTGTGTATCTCCACTTCCCCTATTTTGCCTGTAACCATTGCCAGGTCCTCTCTGCTTCTGACTCTCTTTCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGATCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGGCCTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30082626 205 - 229942017 CCCAGCAGTGCATAAGTAAGTGGTGTGTGCCTATGTTAGTCCGTGCACGCGGTGTGAGTGTTGTGTGTGTATCTCCACCTCCCCTATTTTGCCTGTAACCATTGCCAGGCCCTCTCTGCTTCTGACTCCCTTTCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGATCAGAGCTGAACTGGCCCTG------CCCCTAGAAGGGACCTC i ponAbe2.chr1 I 503 C 0 s rheMac3.chr1 33378730 205 + 229590362 CCCAGCAGTGCATAAGTAAGTGGCACATACCTGTGTTAGTCCGTGCACATGGTGTGAGTGTTGTGTGTGTATCTCCACCTCCCCTATTTTGCCTGTAACCATTGCCAGGCGCTCTCTGCTTCTGACTCCCTTTCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGAGCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGGCCTC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29889981 205 - 227556264 CCCAGCAGTGCATAAGTAAGTGGCACATACCTGTGTTAGTCCGTGCACATGGTGTGAGTGTTGTGTGTGTACCTCCACCTCCCCTATTTTGCCTGTAACCATTGCCAGGCCCTCTCTGCTTCTGACTCCCTTTCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGAGCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGGCCTC i macFas5.chr1 I 648 C 0 s papAnu2.chr1 32653370 205 + 220367699 CCCAGCAGTGCATAAGTAAGTGGCACGTACCTGTGTTAGTCCGTGCACATGGTgtgagtgttgtgtgtgtatCTCCACCTCCTCTATTTTGCCTGTAACCATTGCCAGGCCCTCTCTGCTTCTGACTCCCTTTCTCTTCCATCCTCACCCCTCTGGGGATCAGGCAGAGCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGGCCTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169683 211 - 130588469 CCCAGCAGTGCATAAGTGAGTGGCACGTACCTGTGTTAGTCCGTGCACACGGTGTGAGTGTTGTGTGTGTATCTCCACCTCCCCTATTTTGCCTGTAACCATTGCCAGGCCCTCTCTGCTTCTGACTCCCTTTCTCTTCCATCCTTACCCCTCTGGGGATCAGGCAGAGCAGAGCTGAACTGGCCCTGGCCCTCTCCCTAGAAGGGGCCTC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628237 197 + 155834243 -CCAGTGGTGCACA----AGTGGCATGTGCCTGTGCCAGTCTGTGCACACAGTGTGAGTGTCGTGTGTATATCTCTACCTC--CTGCTTTGCCTGTAACCATTGCCAGGCCCTCACTGCTCCTGGCTCCCTTTCTCTTCCATCTTCACCCCTCTGGGGATCAGGCAGGGCAGAGCTGAACTGGCCCTG------TCCCTAGAAGGGACTC- i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 514957 57 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=82969.000000 s hg38.chr1_KI270760v1_alt 57896 27 + 109528 AGAGGTTGGCCTGGCCTGTCCGCCCTT s panTro4.chr1 30494201 27 + 228333871 AGAGGATGGCCTTGCCTGTCCACCCTT i panTro4.chr1 C 0 I 419 s ponAbe2.chr1 30082831 27 - 229942017 AGAAGTTGGCCTGGCCTGTCCACCCTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 515014 27 - 28733288 AGAGACTGGCCTGGCCTGTCCACCCTT i nomLeu3.chr24 I 57 C 0 s rheMac3.chr1 33378935 27 + 229590362 AGAGGTTGGCCTGGCCTGTCCACTCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890186 27 - 227556264 AGAGGTTGGCCTGGCCTGTCCACTCTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653575 27 + 220367699 AGAGGTTGGCCTGGCCTGTCCACTCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169894 27 - 130588469 AGAGGTTGGCCCGGCCTGTCCACTCTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628434 27 + 155834243 AGAGGTTGGCCTGGCCTGTCCACCCTT i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I a score=104082.000000 s hg38.chr1_KI270760v1_alt 57923 51 + 109528 TCGCGTGTCTCCTGTCCTCTCCCCCTCccatgtggccttgggcgccttcag s ponAbe2.chr1 30082858 50 - 229942017 ATGCGTGTCTCCTGTCCTCTCCCC-TCCAATGGGGCCTTGGGCGCCTTCAG i ponAbe2.chr1 C 0 I 69 s nomLeu3.chr24 515041 50 - 28733288 CCGCCTGTCCTCT-TCCTCTCTCTCTTCCATGTGGCCTTGGGTGACCTCAG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33378962 51 + 229590362 CTGCGCGTCTCCTGTCCTCTCTCCCTCCCACgtggccttgggcaccttcag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890213 51 - 227556264 CTGCGCGTCTCCTGTCCTCTCTCCCTCCCACGTGGCCTTGGGCACCTTCAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653602 51 + 220367699 CTGCGCATCTcctgtcctctctccctcccacgtGGCCTTGGGCACCTTcag i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169921 51 - 130588469 CTGCGCGTCTCCTGTCCTCTCTCCCTCccatgtggccttgggcaccttcag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628461 51 + 155834243 CTGCGTATGTCCTGTCCTTTCCCCCTCCCATGTGGCCTTGGGCACCTTCAG i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I e panTro4.chr1 30494228 419 + 228333871 I a score=132129.000000 s hg38.chr1_KI270760v1_alt 57974 84 + 109528 agccccagtttcctcatgtggagaacaggatgatg-ctatctcacggggaaggtgggaggctggagatgaagggtgtcaagagcc s nomLeu3.chr24 515091 85 - 28733288 AACCTTTGTTTCCTTGGCTGGGGAACAGCATGATGGCCGTCTCACAGGGAAAGTAGGAGGCTAGAGATGAGGGGTGTCAAGGGTC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33379013 84 + 229590362 agccccagtttcctcatgtggagaacaggATGAGG-CCGTCTCATAGGGAAGACGGGAGGCTGGAGATGAAGGGTGTCAAGGGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890264 84 - 227556264 AGCCCCAGTTTCCTCATGTGGAGAACAGGATGAGG-CCGTCTCATAGGGAAGACGGGAGGCTGGAGATGAAGGGTGTCAAGGGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653653 84 + 220367699 agccccagtttcctcatgtgGAGAACAGGATGAGG-CCGTCTCATAGGGAAGACGGGAGGCTGGAGATGAAGGGTGTCAAGGGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28169972 84 - 130588469 agccccagtttcctcatgtggagaacaggatgagg-ctgtctcatagggaagatgggaggctggagatgaagggtgtcaagggcc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628512 83 + 155834243 AGTCCCAGTTTCCTCATGTGAGGAACAGGATGGTG-CCGCGTCACAGAGAAGGTGGGAGGCTGGAGATGAGGGGTGTCAAGGCC- i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I e ponAbe2.chr1 30082908 69 - 229942017 I e panTro4.chr1 30494228 419 + 228333871 I a score=21667.000000 s hg38.chr1_KI270760v1_alt 58058 10 + 109528 tgcttgctgc s panTro4.chr1 30494647 10 + 228333871 TGCTTGCTGC i panTro4.chr1 I 419 C 0 s nomLeu3.chr24 515176 10 - 28733288 TGTTCGGTGC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33379097 10 + 229590362 TGCTTGCTGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890348 10 - 227556264 TGCTTGCTGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653737 10 + 220367699 TGCTTGCTGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28170056 10 - 130588469 tgcttgctgc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628595 10 + 155834243 TGCCTGGTGC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I e ponAbe2.chr1 30082908 69 - 229942017 I a score=1044421.000000 s hg38.chr1_KI270760v1_alt 58068 374 + 109528 ccgacCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACCTGG-CATTTTCCTCACCCCCACCCACCAGCAGAGCTGAGGCCTGCAGTGGGCTTGGAGCTAGCCTGCCCCGGCCCTCGCTTGGCCCTACTACCTGCTTTCTG-------GGGCCCTGGGTCCTGGTTT-GCCCCTGTGACCTGGCTCCTCTTCTGTACCTCAGGTGACCACAGCCTTGCCCCATGTTCAGTGAGTCCCCGCACAGAGGTGCTCAGTAGACAGGGCTCCCACGGGTCCCCATGCTCAGGGACAGGTGGGGTGGGGGGCTCACCAGCCGTGGGGCTGTGCCCAGAGGGGCCCGAGGGAGCACCCAGAGGAACCAGGTCCACCGGGCAC s panTro4.chr1 30494657 373 + 228333871 CCGACCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACCTGG-CATTTTCCTCACCCCCACCCACCAGCAGAGCTGAGGCCTGCAGTGGGCTTGGAGCTAGCCTGCCCCGGCCCTCGCTTGGCCCTACTACCTGCCTTCTG-------GGGCCCTGGGTCCTGGTTT-GCCCCTGTGACCTGGCTCCTCTTCTGTACCTGAGGTGACCACAGCCTTGCCCCATGTTCAGTGAGTCCCCGCACAGAGGTGCATGG-GGACAGGGCTCCCACAGGTCCCCATGCTCAGGGACAGGTGCGGTGGGGGGCTCACCAGCCATGGGGCTGTGCCCAGAGGGGCCCGAGGGAGCACGCAGAGGAACCAGGTCCACCGGGCAG i panTro4.chr1 C 0 I 11 s ponAbe2.chr1 30082977 374 - 229942017 CCGACCCCAAGAGGGCAGTTTAGCCTTCCTGCATGGAAGTTTCCACCTGG-CATTTTCCTTACCCCCACCCACCGGCAGAGCTGAGGCCTGCAGTGGGCTTGGAGCTAGCCTGCCCCGGCCCTCGCTTGGCCCTACTACCTGCCTTCTG-------GGGCCCTGGGTCCTGGTTT-GCCCCTGTGACCTGGCTCCTCTTCTGTACCTGAGGTGACCACAGCCTTGCCCCATGTTCAGTGAGTCCCTGCACAGAGGTGCTCAGTAGACAGGGCTCCCACGGGTCCCCATGCTCAGGGACAGGTGGGGTGGGGGGCTCGCCAGCCATGGGGCTGTGCCCAGAGGGGCCTGAGGGAGCACGCAGAGGAACCAGGTCCACCGGGCAC i ponAbe2.chr1 I 69 C 0 s nomLeu3.chr24 515186 354 - 28733288 -CCAGCCTGAGAGGGCGGTTTAGCCTTCCTGCCT----CTGTCCACCTGGAAACTTCCCTGACCCTCATCCACCAGCAGAGCTGAGGCCTGTGGT-GGCTCCAAGCCAGGCTGCCTGAATCCCCTCCTGGCCCTACTGCCTTTTCGCTG-------GGGCCCTGGGCTGTGGCTTGGCCCCTGTGACCCGGTGGCTTCTCTG------GGGTGATCACAGCCCTGTCCCATGCTCGGTGAGTCCCCTCACAGGGGTGCTCA--ATACAGGGTTCCCACAGGTCCCCATGCTCAGGGATGG--GGGGTGG------CACCAGCCATGAGGCTGTGCCCAGAGGTTCCCAAGGGAGCACCCAGAGGAACCAGGTCCACCAGGCAC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33379107 374 + 229590362 CCGACCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACGTGG-CATTGTCCTCACTGCCACCCACCAGCAGAGCTGAGGCCTGTAGTGGGCTTGGAGCTAGCCTGCTCCAGCCCTCGCTTGGCCCTACTACCTGCCTTCCG-------GGGTCCTGGACCCTGGTTG-GCCCCTGTGACCTGGCTGCTCTTCTATACCTGAGGTGACCACAGTCCTGCCCCATGTTCAGTGAGTCCTCACACAGAGGTGCTCAGTAGACAGGGCTCCCACAGGTCCCCATGCTCAGGGACAGGTGGGGTGGGGGGCTCACCAGCCATGGGACTGTGCCCAGAGGGGCTCGAGGGGGCACCCAGAGGAACCAGGTCCACCGGGCAC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890358 374 - 227556264 CCGACCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACGTGG-CATTGTCCTCACTGCCACCCACCAGCAGAGCTGAGGCCTGTAGTGGGCTTGGAGCTAGCCTGCTCCAGCCCTCGCTTGGCCCTACTACCTGCCTTCCG-------GGGTCCTGGACCCTGGTTG-GCCCCTGTGACCTGGCTGCTCTTCTATACCTGAGGTGACCACAGTCCTGCCCCATGTTCAGTGAGTCCTCACACAGAGGTGCTCAGTAGACAGGGCTCCCACAGGTCCCCATGCTCAGGGACAGGTGGGGTGGGGGGCTCACCAGCCATGGGACTGTGCCCAGAGGGGCTCGAGGGGGCACCCAGAGGAACCAGGTCCACCGGGCAC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32653747 374 + 220367699 CCGACCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACGTGG-CATTGTCCTCACTGCCACCCACCAGCAGAGCTGAGGCCTGTAGTGGGCTTGGAGCTGGCCTGCCCCAGCCCTCGCTTGGCCCTACTACCTGCCTTCCG-------GGGTCCTGGACCCTGGTTG-GCCCCTGTGACCTGGCTGCTCTTCTATACCTGAGGTGACCACAGCCCTGCCCCATGTTCAGTGAGTCCTTACACAGAGGTGCTCAGTAGACAGGGCTCCCACAGGTCCCCATGCTCAGGgacaggtggggtggggggctcaCCAGCCATGGGACTGTGCCCAGAGGGGCTCGAGGGGGCACCCAGAGGAACCAGGTCCACTGGGCAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28170066 374 - 130588469 ccgacCCCAAGAGGGCAGTTTAGCCTTCCTGCCTGGAAGTTTCCACCTGG-CATGGTCCTCACTGCCACCCACCAGCAGAGCTGAGGCCTGTAGTGGGCTTGGAGCTAGCCTGCCCCAGCCCTCGCTTGGCCCTACTGCCTGCCTTCTG-------GGGTCCTGGACCCTGGTTG-GCCCCTGTGACCTGGCTGCTCTTCTATACCTGAGGTGACCACACCCCTGCCCCAAGTTCAGTGAGTCCTCACACAGAGGTGCTCAGTGGACAGGGCTCCCACAGGTCCCCATGCTCAGGGCCAGGTGGGGTGGGGGGTTCACCAGCCATGGGGCTGTGCCCAGAGGGGCTCGAGGGGGCACCCAGAGGAACCAGGTCCACCGGGCAC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628605 379 + 155834243 CCAACACCAAGATGGCAGTTTTGCCTTCCTACCTGGAAGTTTCCACCTGG-CATTGTCCTTACCCCCACCCACCAGCAGAGCTGAGGCCTGCAGCGGGCTTGGAACCAGCCTGACTCAGCCCTGGCTTGGCCCTACTATCTGCCTGCTGGGGCCCTGGGCCCTGGGCCCTGGTTG-GCCCCTGTGACCCAGCTCCTCTCCTGTATCTGAGGTGACCACAGCCCTGTCCCATGCTCAGTGAGTCCCCACACAGGGGTGCTCAGT--ACAGGGCTCCCATGGGTCCCCATGCTCAGGGACAGGTGGGGTGGGGGGCTCCCTAGCCATGAGGCTGTACCCAGAGGGTCCCAAGGGAGCACCCAGAGGAACCAGGGCCACTGGGTAC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I a score=23354.000000 s hg38.chr1_KI270760v1_alt 58442 10 + 109528 CTCTGTCACC s ponAbe2.chr1 30083351 10 - 229942017 CTCTGTCGCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 515540 10 - 28733288 CTCTGTCACC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33379481 10 + 229590362 CTCCGTCGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890732 10 - 227556264 CTCCGTCGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32654121 10 + 220367699 CTCCGTCGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28170440 10 - 130588469 CTCCGTCGCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628984 10 + 155834243 CTCTGTCACC i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I e panTro4.chr1 30495030 11 + 228333871 I a score=959646.000000 s hg38.chr1_KI270760v1_alt 58452 323 + 109528 TCATCCAGGAAACCAGGACTGCTGTCAGGTGTTTACTGC-TTAGTAAACATTTTGATGTTTCATTCATGAAATCTGCCTTTTCTGAGGCCTCCTGCAGTAC--AGGCTGGAGTGAAGAATTTAATGAGAACTGGGCCTGTGGTCCCTGATCAGCTCCAAGCATGTAGCTCCCAGGAGGCCGTGTCTGCACTCAGAGCAGGAGTCCCCATATCCATCCCACAGGTCACAGAGTGGGAGGGACGTACTGCACAAGGAGGTGAAGTGGAGTCACCTCAATATATACAAACACACACAGTCGATGGATGGGGATAACAGTTCAGGCTTTT s panTro4.chr1 30495041 323 + 228333871 TCGTCCAGGAAACCAGGACTGCTGTCAGGTGTTTACTGC-TTAGTAAACATTTTGATGTTTCATTCATAAAATCTGCCTTTTCTGAGGCCTCCTGCAGTAC--AGGCTGGAGTGAAGAATTTAATGAGAACTGGGCCTGTGGTCCCTGATCAGCTCCAAGCATGTGGCTCCCAGGAGGCCGTGTCTGCACTCAGAGCAGGAGTCCCCATATCCATCCCGCAGGTCACAGAGCGGGAGGGACGTACTGCACAAGGAGGTGAAGTGGAGTCACCTCAATATATACAAACACACACAGTCGATGGATGGGGATAACAGTTCAGGCTTTT i panTro4.chr1 I 11 C 0 s ponAbe2.chr1 30083361 323 - 229942017 TCGTCCAGGAAACCAGGACTGCTGTCAGGTGTTTACTGC-TTAGTAAACATTTTGATGTTTCATTCATGAAATCTGCCTTTTCTGAGGCCTCCTGCAGTAC--AGGCTGGAGTGAAGAATTTAATGAGAACTGGGCCTGTGGTCCCTGATCAGCTCCAAGCACGTGGCTCCCAGGAGGCCGTGTCTGCACTCGGAGCAGGAGTCCCCATCCCCATCCCACAGGTCACAGAGCAGGAGGGACGTACTGCACAAGGAGGTGAAGTGGAGTCATCTCAATATATACAAACACACACAGTCGATGGATGGGGATAACAGTTCAGGCTTTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 515550 321 - 28733288 TCGCCCAGGAAATCAGGACTGCTGTCAGGTGTTTACTGC-TTGGTAAACATTTTGGGGTTTCATTCATGAAACCTGCCTTTTCTGAGGCCTCCTGCAGTAC--AGACTGGAGTGAAGAATTTAATGAGAGCTGGGCCTGTGGTCGCTGAACAGCGCCAAGCTCGTGGCTCCCAGGAGGCA--CTCTGCACTCAGAGCAGGAGTTCCCATCCCCATCCCACAGGTCACAGAGCAGGAGGCACGTACTGCACAGGGAGGTGAAGTGGAGTCACCTCAATATATACAAGCACACACGGGCAATGGATGGGAATAACAGTTCAGGCtttt i nomLeu3.chr24 C 0 I 10238 s rheMac3.chr1 33379491 323 + 229590362 TCGTCCAGGAAACCAGGGCTGTTGTCAGGTGTTTACTGC-TTGGTAAACATTTTGATGTTTCATTCATGAAACCTGCCTTTCCTGAGGCCTCCTGCAGTAC--AGACTGGAGCAAAGAATTTAAAGAGAGCTGCGCATGTGGTCCCTGAACAGCTCCAAGCACGTGGCTCCCAGGAGGCCGTGTCTGCACTCAGAGCAGGAGTCCCCATCCCCGTCCCGCAGGTCACAGAGGGGGAGGGACGTACTGCACAGGGAGGTGAAGTGGAGTCCCCTCAATATATACAAACACACACAGTCGATGGATGGGGATAACAGTTCAGACTTTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29890742 323 - 227556264 TCGTCCAGGAAACCAGGGCTGTTGTCAGGTGTTTACTGC-TTGGTAAACATTTTGATGTTTCATTCATGAAACCTGCCTTTCCTGAGGCCTCCTGCAGTAC--AGACTGGAGCAAAGAATTTAAAGAGAGCTGCGCATGTGGTCCCTGAACAGCTCCAAGCACGTGGCTCCCAGGAGGCCGTGTCTGCACTCAGAGCAGGAGTCCCCATCCCCGTCCCGCAGGTCACAGAGGGGGAGGGACGTACTGCACAGGGAGGTGAAGTGGAGTCCCCTCAATATATACAAACACACACAGTCGATGGATGGGGATAACAGTTCAGACTTTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32654131 324 + 220367699 TCGTCCAGGAAACCAGGACTGTTGTCAGGTGTTTACTGCTTTGGTAAACATTTTGATGTTTCATTCATGAAACCtgcatttcctgaggcctcctacaGTAC--AGGTTGGAGTGAAGAATTTAAAGAGAGCTGCGCATGTGGTCCCTGAACAGCTCCAAGCACGTGGCTCCCAGGAGGCCGTGTCTGCACTCAGAGCAGGAGTCCCCATCCCCGTCCCGCAGGTCACAGAGGGGGAGGGACGTACTGCACAGGGAGGTGAAGTGGAGTCACCtcaatatatacaaacacacacagtcgATGGATGGGGATAACAGTTCAGACTTTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28170450 322 - 130588469 TCATCCAGGAAACCAGGGCTGTTGTCAGGTGTTTACTGC-TTGGTAAACATTTTGATGTTTCATTCATGAAACCTGCC-TTCCTGAGGCCTCCTGCAGTAC--AGACTGGAGCAAAGAATTTAAAGAAAGCTGCGCATGTGGTCCCTGAACAGGTCCAAGCACGTGGCTCCCCGGGGGCAGTGTCTGCACTCGGAGCAGGAGTCCCCATCCCCGTCCCACAGGTCACAGAGCGGGAGGGACGTACTGCACAGGGAGGTGAAGTGGAGTCACCTAAATATATACAGACACACACAGTCAATGGATGGGGATAACAGTTCAGACTTTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64628994 322 + 155834243 ---TCCAGGAAACCAGGACTACTGTCAGGTGTTTTCTGC-TTGGTAAACAATTTTATGTTTCATTCATGAAATCTGCCTTTCCTGAGGCCTCCTGCAGTACAGAGACTGGAGTGCAGAATTTAATGAGAGCTGGGCCTGTGGTCCCTCAACAGCTCCAAGCATGTGGCTCCCAGGAGGTCATGTCTGCCCTCAGAGCAAGAGTCCCCATCCCCATCCCATAGGTCACAGAGCAGGAGGGATGTACCACACAGGGAGGTGAAACGGAGTCACCTCAGTATATACAAGCACACACAGTCAATAAATGGGAATAACAGTTCAGGCTTTT i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I a score=640836.000000 s hg38.chr1_KI270760v1_alt 58775 265 + 109528 CAAAgcacatagtaggtgcacaaaaaaaatttgttgaatgagtgaatGACATTTTATTCACAGATATGCCttggtttccagaatgaccctgtggtttggagggtggctgctgtatctctattttctgtatgagaaa-caaaggctcagagaggttaggcagcctgcccaaggacacacagcATCAGCAGGTACTCCTGACTGGGGAGCACTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTCCCCCCACTCCCTACCTGGAG s panTro4.chr1 30495364 265 + 228333871 CAAAgcacatagtaggtgcacaaaaaaaaattgttgaatgagtgaatGACATTTTATTCACAGATATGCCttggtttccagaatgaccctgtggtttggagggtggctgctgtatctctattttctgtatgagaaa-caaaggctcagagaggttaggcagcctgcccaaggacacacagcATCAGCAGGTACTCCTGACTGGGGAGCACTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTCCCCCCACTCCCTACCTGGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30083684 265 - 229942017 CAAAgcacatagtaggtgcacaaaaaaaatttgttgaatgaatgaatGACATTTTATTCACAGATATGCCttggtttccagaatgaccctgtggtttggagggtggctgctgtatctctattttctgtatgagaaa-taaaggctcagagaggttaggcagcctgcccaaggacacacagcattagctggtaCTCCTGACTGGGGAGCGCTGAGTTCACCTCTCCTTCGACAGACAGGGAAGCTTCCCCCCACTCCCTACCTGGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33379814 265 + 229590362 CAAAgcacatagtaggtgcacaaaaaatatttgttgaatgaatgaatGACATTTTATTCACAGATATGCCttggtttccagaatgaccctgtggtttggagggtagctgctgtatctctattttctatatgggaaa-caaaggctcagagaggttaggcagcctgcccagggacacacagcatcagtggGTACTCCTGACTGGGGAGCGCTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTTCCCCCACCCTCTACCCGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29891065 265 - 227556264 CAAAgcacatagtaggtgcacaaaaaatatttgttgaatgaatgaatGACATTTTATTCATAGATATACCttggtttccagaatgaccctgtggtttggagggtagctgctgtatctctattttctatatgggaaa-caaaggctcagagaggttaggcagcctgcccagggacacacagcatcagtggGTACTCCTGACTGGGGAGCGCTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTTCCCCCACCCTCTACCCGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32654455 265 + 220367699 CAAAGCACATAGTAGGTggacaaaaaatatttgttgaatgaatgaatgacattttATTCACAGATATGCCTTGGTTTCCAGAATGACCCTGTGGTTTGGAGGGTAGCTGCTGTATCTCTATTTTCTATATGggaaa-caaaggctcagagaggttaggcagCCTGCCCAGGGACACACAGCATCAGTGGGTACTCCTGACTGGGGAGCGCTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTTCCCCCACCCTCTACCCGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28170772 265 - 130588469 CAAAgcacatagtaggtgcacaaaaaatatttgttgaatgaatgaatGACATTTTATTCACAGATATGCCttggtttccagaatgaccctgtggtttggagggtagctgctgtatctctattttctatatgggaaa-caaaggctcagagaggttaggcagcctgcccagggacacacagcatcaatggGTACTCCTGACTGGGGAGCACTGAGTTCACCTCTCCTTCGACAGACAGGGGAGCTTTCCCCCACCCTCTACACGGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64629316 266 + 155834243 CAAAgcatatcgttggtgcacaacaaatatttgttgaatgaataaaGGACATTTTAttcacagatatgccttagtttccagaatgaccctgtggttaggaaagtggctgctgtagctccgttttctatatgagaaagcaaaggctcagagaggttaggcaatctgcccaaggacacacagcatcagcgagtgCTCCTGACTGGGGAGTGCTGAGTTCACCTCTCCTTCAACAGACAGGGGAGCTCTCTCCATCCCCCAACCCGGAG i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 515871 10238 - 28733288 I e canFam3.chr2 15001805 579 - 85426708 I a score=680858.000000 s hg38.chr1_KI270760v1_alt 59040 273 + 109528 CCCATAGACCTTTGATAATGCCAGGGCTGCCTCTGAGTCTCAACTCACCCCTTGATTTCTTGCA--CCCCACACTGTAcactacgcttcctgttttacacctatcatctcatctcatttttacaatggccccatcttattaatt----------gttcagagaggtttggtgacttggccaaggtcccacaagaagtggaaaggacaggacttgtgctttga--ttt-------------------ttttTCCCATTGCACCAGACAAGGTGACTCACCCCCCGCCC-CCCTTGGGTTGGCAAGGTG s panTro4.chr1 30495629 272 + 228333871 CCCATAGAACTTTGATAATGCCAGGGCTGCCTCTGAGTCTCAACTCACCCCTTGATTTCTTGCA--CCCCACACTGTAcactaggcttcctgttttacacctatcatctcatctcatttttacaatggccccatcttattaatt----------gttcagagaggtttggtgacttg-ccaaggtcccacaagaagtggaaaggacaggacttgtgctttga--ttt-------------------ttttTCCCATTGCACCAGACAAGGTGACTCACCCCCAACCC-CCATTGGGTTGGCAAGGTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30083949 273 - 229942017 CCCATAGACCTTTGATCACGCCAGGGCTGCCTCTGAGTCTCAACTCACCCCTTTATTTCTTGCA--CCCCACACTGTAcactaggcttcctgttttacacctatcatctcatctcatttttacaatggccccatcttattaatt----------gttcagagaggtttggtgacttgcccaaggtcacacaagaagtggaaaggacaggacttgtgctttga--ttt-------------------ttttTCCCATTGCACCAGACAAGGTGACTCACCCCCCGCCC-CCCTTGGGTTGGCAAGGTG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 526109 300 - 28733288 CCTGTGGGCCTTTGTCCACTTGGGGGCAGCTTTTGAACCCTGGCTCATCCGTCTCttcattgcactccctgcatcatgcactgggcttccagttctatggcgatgaactcgtttaatctttacaacagctccctcttactaatgaggaaactgaggtcagacaggttcggtgacttgcccaaggtcacacaggaagtggaagaagcagg-ctcccgctctgt--ttctctggctcagagtccagtgtttttcccgctgccccGGATGAGATGACTCA---GGGACCC-CCCTCGGGTTTGCAACATG i nomLeu3.chr24 I 10238 C 0 s rheMac3.chr1 33380079 274 + 229590362 CCCACAGACCTTTGATCATGCCAGGGCTGCCTCTGAGTCTCCACTCA-CCCTTTatttcttgca--ccccatactgtacactaggcttcctgttttacacctatcatctcatctcatttttacaatggccccatcttattaatt----------gttcagagaggtttagtgacttgcccaaggtcgcacaagaagtggaaaggacaggacttgggctttga-tttt-------------------tttttctcATTGCACCAGACAAGGTGACTCGCCCCCTACCCTCCCTTGGGTTGGCAAGGTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29891330 275 - 227556264 CCCACAGACCTTTGATCATGCCAGGGCTGCCTCTGAGTCTCCACTCA-CCCTTTATTTCTTGCA--CCCCATACTGTACACTAGGCTTCCTGTTTTACACCTATCATCTCATCTCATTTTTACAATGGCCCCATCTTATTAATT----------gttcagagaggtttagtgacttgcccaaggtcgcacaagaagtggaaaggacaggacttgggctttgattttt-------------------ttTTTCTCATTGCACCAGACAAGGTGACTCGCCCCCTACCCTCCCTTGGGTTGGCAAGGTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32654720 275 + 220367699 CCCACAGACCTTTGATCATGCCAGGGCTGCCTCTGAGTCTCCACTCA-CCCTTTATTTCTTGCA--CCCCATACTGTACACTAGGCTTCCTGTTTTACACCTATCATCTCATCTCATTTTTACAATGGCCCCATCTTATTAATT----------GTTCAGAGAGGtttagtgacttgcccaaggtcacacaagaaGTGGAAAGGACAGGACTTgggcttcaattttt-------------------tttttctcattgcacCAGACAAGGTGACTCGCCCCCTACCCTCCCTTGGGTTGGCAAGGTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28171037 275 - 130588469 CCCACAGACCTTTGATCATGCCAGGGCCGCCTCTGAGTCTCCACTCACCCCTTTatttcttgca--ccccatactgtacactaagcttcctgttttacacctatcatctcatctcatttttacaacgaccccattttattaatt----------gttcagagaggtttagtgacttgcccaaggtcacacaagaagtggaaaggacaggacttgggctttga-tttt-------------------tttTTCTCATTGCACCAGACAAGGTGACTCGCCCCCTACCCTCCCTTGGGTTGGCAAGGTG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64629582 264 + 155834243 TCCACAGGCCTTTTATCGTGCCAGGGCTGCCTCTGAGTCTCAACTCACCCTTTTATTTCTTGCA--CCCCACACTGTGCTCTAGACTTCCTGTTTCACACCTATCATCTCATCTT-TTTTTACAGCAGC-CTGTTTTATTAACT----------gttcagagaggtttagtgacttggccaagattacagcggaagtggataggacaggacttgtgcttaga----t-------------------tttttcccactgcaccagacaaggtgcctcg------GCCCTGCCTTGGGTTGGCAAGGTG i calJac3.chr7 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15001805 579 - 85426708 I a score=3102648.000000 s hg38.chr1_KI270760v1_alt 59313 1192 + 109528 TTCTTTCCAGAATAA----CTGCCAAGATCCCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTCCTTTGGAACT---GGCC---ATCCAATCAGAGGTTCCCAGGCTTCCCTGTTTATATCAGCAGTAAATATGAGGCTG---------------------GGGAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACACAA-GAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCagagagagaag---agtggagagaggagagagtcacacagagagGGGGGAAC-AAAACCAAGGAGAACAAGACACCAAGAGGATAACAGAGGCAGCAAAATACATTAAAAAAAA--CACAAAACACATACACGTGTGTGCACACGAACACACATGGACGAGAAAGAGAACCTTTGGGAAAGGCTCTAAAAAT--GAGTGTGATGGAGGCACCCACCCAGGGAGTGAGAAacacacacaca-cacacacacacacacacacacacacacCACGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAG-ACAGACGGTGG-GGAAAAATGGAGTGTAGAGCAGAGA-GGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACAAATTGCGATGGGGAGAGGAAGCAGAGAAGCCATAGACGCTGGAGCATCAGGGCTGGGAGCTCGCACCTTCCCCTCCCCACCTCCCGCTCCGCTTCATCACCAACTGCCTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCTGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCGCCAAGACGCACTCTGCATTCCACCCGCGTGCCCTTAGTGACACAGAGGCGGA---GGGGGATCCATCTGCACCTAGCACAGGTTACTTCTC---TTTTCTTAGCTTTGAACCAGATGCACTGATGGAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCTACGCC-CAGAGCCACTTAGGCA-----GCTAATCGCTGAGCCATGAGCGGCCGGAGGTGGGCACAACCCAAAGCCTCTCAAG---CACCCCCAGGGTGCCCACCAGGGACAAGATGCAGCCTCTGCACTAGGGA-CCCCCACATGGGGGGGC-GACAGTCCTGGGTCCACATGACCCTTACTTGCTCC-TGCCTCTGGTGAGTCTCCTGTCCTGACACCTCTAAGCCTCCACATCCATCTCTATGAAATGGGATC s panTro4.chr1 30495901 1166 + 228333871 TTCTTTCCAGAATAA----CTGCCAAGATCCCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTCCTTTGGAACT---GGCC---ATCCAATCAGAGGTTCCCAGGCTTCTCTGTTTATATCAGCAGTAAATATGAGGCTG---------------------GGGAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACACAA-GAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCAGAGAGAGAAG---AGTGGAGAGAGGAGAGAGTCACACAGAGAGGGGGGAAC-AAAACCAAGGAGAACAAGACACCAAGAGGATAACAGAGGCAGCAAAATACATTAAAAAAAA-----AAAA-----ACACGTGTGTGCACACGAACACACATGGACGAGAAAGAGAACCTTTGGGAAAGGCTCTAAAAAT--GAGTGTGATGGAGGCACCCACCCAGGGAGTGAGAAacacacacaca-cacacacacac----------------CACGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAC-ACAGACAGTGG-GGAAAAATGGAGTGTAGAGCAGAGA-GGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACAAATGGCGATGGGGAGAGGAAGCAGAGAAGCCATAGATGCTGGAGCATCAGGGCTGGGAGCTCGCACCTTCCCCTCCCCACCTCCTGCTCTGCTTCATCACCTCCTGCCTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCTGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCGGTCAAGACGCACTCTGCATTCCACCCGCGTGCCCTTAGTGACACAGAGGCGGA---GGGGGATGCATCTGCACCTAGCACAGGTTACTTCTCCTCTTGTCTTAGCTTTGAACCAGATGCACTGATGGAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCCACGCC-CAGAGCCACTTAGGCA-----GCTAATCGCTGAGCCATGAGCGGCCGGAGGTGGGCACAACCCAAAGCCTCTCAAG---CATCCCCAGGGTGCCCACCAGGGACAAGATGCAGCCTCTGCACTAGGGA-CCCCCACATGGGGGGGC-GACagtcctgggtccacatgacccttacttgctcc-tgcctctggtgagtctcccg-----acacctctaagcctccacatccatctctatgaaatgggatc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30084222 1177 - 229942017 TTCTTTCCAGAATAA----CTGCCAAGATCCCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTCCTTTGGAACT---GGCC---ATTCAATCAGAGGTTCCCAGGCTTCCCTGTTTATATGAGCAGTAAATATGAGGCTG---------------------GGGAGAGAGA--------------------------------------AAAACC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACGCAA-GAGGGATG---GGGTAAGAAAGG-------CCAGCT------------------GCAGAGAGAGAAG---AGCGGAGAGAGGAGAGAGTCACACAGAGAGGGGGGAACAAAAACCAAGGAGAACGAGACACCAAGAGGACAACAGAGGCAACAAAATACCTAAAAAAAGAAACACAAAACACATACATGTGTGTGCACACGAACACACACGGACGAGAAAGAGAACCTTTGGGAAAGGCTCTAAAAAT--GAGTGTGATAGAGGCACCCACCCAGGGAGTGAGGAACACACACACA-CACACTCACGC----------------CACGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAG-ACAGACGGTGG-GGAAAAATGGAGTGTAGGGCAGAGAGGGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACAAATTGCGATGGGGAGAGGAAGCAGAGAAGCCATGGATGCTGGAGCATCAGGGCTGGGAGCTCGCACCTTCCCCTCCCCACCTCCCGCTCCGCTCCACCACCTCCTGCCTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCTGAGTGGAGAAGTTAATTCTCCCAAGTTCAGCCGTCAAGACGCACTCTGCATTCCACCCGCATGCCCTTAGCGACACTGAGGCAGA---GGGGGATGCATCTGCACCTAGCACAGGTTACTTCTCCTCTTGTCTTAGCTTTGAACCAGATGCACTGATGGAAGGAGAGAGACCTGCTCAGCATTTGATCATCAAGCCCACACC-CAGAGCTACTTAGGCA-----GCTAATCTCTGAGCCATGAGCGGCTGGAGGTTGGCACAACCCAAAGCCTCTCAAG---CACCCCCGGGGTGCCCACCAGGGACAAGATGCAGCCTCTGCACTAGGGA-CCCCCACAT-GGGAGGC-GACagtcctgggtccacatgtcccttacttgcttc-tgcctgtgatgagtctcccg-----acacctctaagcctccacatccacctctgtgaaatgggatt i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 526409 1257 - 28733288 TTCCTTCCTTCCTGATGCCCAGCTGAGAG----CTGCCTGCCCGCCCGAAAGC-TGATTCCCCCTTCCTTGGAACTCAAGGCC---CTCCCACCTGAGTGGCCCAGATTTCCACGTTGGTACCAGCAGCAAATATGGGGTGGGAGGAGCAAGCGAGTAAGAGAGGGAGAGAGATTCCATCGATTCATTGAGAAACAGAAAGAGAGATCAAGAAAGCCTTTAGCACACAAAGACACCAAGTGCACCCTCCACACACACTCACACAGAAGGAAAGAGAGAAACACACACACACTGTGAGGCG---GGGACACGGAGA-------TGAGCTCATACATATGAAGAGGAAGGAGAGGGGGAAA---GGAAGAGAAAAAACAGATTCACACTGGGAAGT-------AAAAACATAGAATAAGAAATGCCCAGCGGGAGATAAAGATAGAAAAATC-----------A-----AATACACGAATATACGAAGGCAGTTACAGACAAATCCATGA-AGAGAGAGCCGTTGTGAGAGGATATAAA--------TGAGAAAGAGGCACAATCTCAGAGAGAGAGGGGGACGCTCACAGGACACACTCGC----------------------------------------AGGCAGAGGCGGGGGGAGACAGGAGAGAGACACATGTCACAACAGACGCAGGCAGAGGGATGGAGGAACGAGCTGGGG-AAGATGGAAAAGGCCC---CAGTGAGACTG-AAGAGACG-GGGGAGAGAATAATAAGCACAGAGAAAGAGCGATGGGGAGAGGCAGCGGAGAAGCCACAGATGCCGGAGCATCAGGGCTGGGAGCTGGCACCTTCCCCTCCCCACCTCCCGCTCCGCTTCACCGCCTCCTGCCTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCTGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCGCCAAGACGCACTCTGCATTCCACCCGCGTGCCCTTAGTGACACAGACGCGGA---GGGGGATGCATCTGCACCTAGCACAGGTTTCTTCTCCTCTTGTCTTAGCTTTGGA--------ACTGCTGAAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCCACACC-CAGAGCCGCATGGTTATACCTGCTAATTTCTGAGCCACAGGCAGCTGCAGGTGGGTACAACCCACAGCCCCTCAAGAAACACCCATAGGGTGCCCACCAGGGACAAGATGCAGCCCCTGCACTAGGGACCCCCCACGTGggaggca-gacagtcctaggtccgaatgtcccttactggtccc-cacctgcgatgactcatctg-----gtctccctaagcctccacgtccacctctgtgaaatgggatc i nomLeu3.chr24 C 0 I 10343 s rheMac3.chr1 33380353 1162 + 229590362 TTCTTTCCAGAATAA----CTGCCAAGATCCCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTCCTTTGGAACT---GGCC---ATCCAATCAGAGGTTCCCAGGCTTCCCTGTTTATATCAGCAGTAAACATGAGGCGG---------------------GGGAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACGCAG-GAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCAGAGAGAGAAG---GGTCGAGACAGCAGAGAGTCACACGGAGAGGGGGGAACAAAAGCCAAGGAGTACGAGACACCGAGGGGATAACAGAGGCAGCAAAACACATAAAAAAAGAAACACAAAACACATACACGTGTGTGCACACGAACACACACGGACGAGAAAGAGAAGCTTTGGGAACGGCTCTGAAAAT--GAATATGATGGAGGCACCCACCCAGGGAGTGAGAAACACACACACA-CAC------------------------CGCGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAG-ACAGACGGCGG-GAAAAAATGGAGTGCAGGGCAGAGA-GGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACGA------ATGGGGAGAGGAAGCAGAGAAGCCACAGATGCCGGAGCGTCAGGGCTGGGAGCTCGCACCTTCCCCTCCCCACCCCCCGTTCCACTCCACCACCTCCTGACTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCCGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCGTCAAGATGCACTCTGCATTCCACCCGCGTGCCCTTAGCGACACAGAGGTGGA---GGGGGATGCATCTGCACCTCGCACAGGTTTCTTCACCTCTTGTCTTAGGTTTGAACCAGATGCCCTGATGGAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCCACGCC-CAGAGCCACTTAGGCA-----GTTAATCTCTGAGCCATGAGTGGCTAGAGGTGGGCACAACCTGAAGCCTCTCAAG---CACCCGCGGGGTGCCCACCAGGGACAAGATGAAGCCCCTGCACTAGGGA-CCCCCACAT-GGGAGGT-GATagtcctgggtccacatgtcccttacttgctcc-tgcctgtgatgagtctcccg-----acacctctaagcctccaggtccacctctgtgaaatgggATC i rheMac3.chr1 C 0 I 3 s macFas5.chr1 29891605 1162 - 227556264 TTCTTTCCAGAATAA----CTGCCAAGATCTCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTCCTTTGGAACT---GGCC---ATCCAATCAGAGGTTCCCAGGCTTCCCTGTTTATATCAGCAGTAAATATGAGGCGG---------------------GGGAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACGCAG-AAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCAGAGAGAGAAG---GGTCGAGACAGCAGAGAGTCACACAGAGAGGGGGGAACAAAAGCCAAGGAGTACGAGACACCGAGGGGATAACAGAGGCAGCAAAACACATAAAAAAAGAAACACAAAACACATACACGTGTGTGCACATGAACACACACGGACGAGAAAGAGAAGCTTTGGGAACGGCTCTGAAAAT--GAATATGATGGAGGCACCCACCCAGGGAGTGAGAAACACACACACA-CAC------------------------CGCGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAG-ACAGACGGCGG-GAAAAAATGGAGTGCAGGGCAGAGA-GGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACGA------ATGGGGAGAGGAAGCAGAGAAGCCACAGATGCCGGAGCGTCAGGGCTGGGAGCTCGCAccttcccctccccaccccctgctccactccaccacctccTGACTCTGCTCATAGCAGCCTGAAATGTA-----AGCCCCGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCGTCAAGACACACTCTGCATTCCACCCGCGTGCCCTTAGCGACACAGAGGCGGA---GGGGGATGCATCTGCACCTCGCACAGGTTTCTTCACCTCTTGTCTTAGGTTTGAACCAGATGCCCTGATGGAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCCACGCC-CAGAGCCACTTAGGCA-----GTTAATCTCTGAGCCATGAGTGGCTAGAGGTGGGCACAACCTGAAGCCTCTCAAG---CACCCGCGGGGTGCCCACCAGGGACAAGATGAAGCCCCTGCACTAGGGA-CCCCCACAT-GGGAGGT-GATagtcctgggtccacatgtcccttacttgctcc-tgcctgtgatgagtctcccg-----acacctctaagcctccaggtccacctctgtgaaatgggATC i macFas5.chr1 C 0 I 3 s papAnu2.chr1 32654995 1162 + 220367699 TTCTTTCCAGAATAA----CTGCCAAGAtccccctccctgcctgccccaaACCATGACCAACTCTCCTCTGGAACT---GGCC---ATCCAATCAGAGGTTCCCAGGCTTCCCTGTTTATATCAGCAGTAAATATGAGGCGG---------------------GGGAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGAGAGGGA---GCAAACGCAG-GAGGGATG---GGGTAagagagg-------ccagct------------------gcagagagagaag---ggtcgagacagcagagagtcacacagagaggggggAACAAAAGCCAAGGAGTACGAGACACCGAGGGGATAACAGAGGCagcaaaacacattaaaaaagaaacacaaaacacatacacgtgtgtgcacacgaacacacacGGACGAGAAAGAGAAGCTTTGGGAACGGCTCTGAAAAT--GAATGTGATGGAGGCACCCACCCAGGGagtgagaaacacacacaca-cac------------------------cgcgcAGAGCCCTGACGCAAACCCTGACagagatggagggagac-------agaTACAATTCAG-ACAGACGGCGG-GAAAAAATGGAGTGCAgggcagaga-ggga--aaaaagacacagatagcaagacag-aaaaaagaTAGGGAGAGATTAATATACAC--ACAA------ATGgggagaggaagcagagaagCCACAGATGCCGGAGCGTCAGGGCTGGGAGCTCacaccttcccctccccaccccctgctcTGCTCCACCACCTCCTGACTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCCGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCGTCAAGACACACTCTGCATTCCACCCGCGTGCCCTTAGCGACACAGAGGCGGA---GGGGGATGCATCTGCACCTAGCACAGGTTTCTTCTCCTCTTGTCTTAGGTTTGAACCAGATGCCCTGATGGAAGGAGAGAGATCTGCCCAGCATTTGATCATCAAGCCCACGCC-CAGAGCCACTTAGGCA-----GTTAATCTCTGAGCCATGAGTGGCTAGAGGTGGGCACAACCTGAAGCCTCTCAAG---CACCCGTGGGGTGCCCACCAGGGACAAGATGAAGCCCCTGCACTAGGGA-CCCCCACAT-GGGAGGT-GACAGTCCTGGGTCCACATGTCCCTTACTTGCTCC-TGCCTGTGATGAGTCTCCTG-----ACACCTCTAAGCCTCCAGGTCcacctctgtgaaatgggatc i papAnu2.chr1 C 0 I 3 s chlSab2.chr20 28171312 1154 - 130588469 TTCTTTCCAGAATAA----CTGCCAAGATCCCCCTCCCTGCCTGCCCCAAACCATGACCAACTCTTCTTTGGAACT---GGCC---ATCCAACCAGAGGTTCCCAGGCTTCCCTGTTTATATCAGCAGTAAATATGAGGCAG---------------------GGCAGAGAGA--------------------------------------AAAGCC--------------------AGCCCACCAT--------------------GGAGACAGGGA---GCAAACGCAG-GAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCAGAGACAGAAG---GGTGGAGAGAGCAGAGAGTCACACAGAGAGTGGGGGACAAAAACCAAGGAACACGAGACACTGAGGGGATAACAGAGGCAGCAAAATATA-AAAAAAAGAAACACAAAACACATACACGTGTGTGCACACAAACACACACGGACGAGAAAGAGAAGCTTTGGGAAAGGCTCTGAAAAT--GAACGTGATGGAGGCACCCACCCAGGGAGTGAGAA--ACATACACA-CAC------------------------CGTGCAGAGCCCCGACGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAATTCAG-ACAGACAGCGG-GAAAAAATGGAGCGCAGGGCAGAGA-GGGA--AAAAAGACACAGATAGCAAGACAG-AAAAAAGATAGGGAGAGATTAATATACAC--ACGA------ATGGGGAGAGGAAGCAGAGAAGCCACAGATGCCAGAGCGTCACAGCTGGGAGCTCGCAccttcccctccccacccctcgctccactccatcgcctccTGACTCTGCTCACAGCAGCCTGAAATGTA-----AGCCCTGAGTGGAGAAGTTAATTCTCCCAAGTCCAGCCATCAGGACGCACTCTGCATTCCACCCGCGTGCCCTTAGCGACACAGAGGTGGA---GGGGGATGCATCTGCACCTAGCACAGGTTTCTTCTCC-----TCTTAGGTTTGAACCAGATGCCCTGATGGAAGGAGAGAGACCTGCCCAGCATTTGATCATCAAGCCCACACC-CAGAGCCACTTAGGCA-----GTTAATCTCTGAGCCATGAGCGGCTAGAGGTGGGCACAACCCGAAGGCTCTCAAG---CACCCGCGGGGTGCCCACCAGGGACAAGATGAAGCCCCTGCACTAGGGA-CTCCCACAT-GGGAGGC-GACAGTCCCGGGTCCACATGTCCCTTACTTGCTCC-TGCCTGTGATGAGTCTCCCG-----ACACCTCTAAGCCTCCACGTCCACCTGTGTGAAATGGGATC i chlSab2.chr20 C 0 I 3 s calJac3.chr7 64629846 1179 + 155834243 TTCTTTCCAGAATGT----CTGCTGAGACTCCCCTCCCTGCCTACCCCAAACCATGACTGACTCTCCTTTGGAACT-GGGGCC---AGCCAATCAGAGGTTCTCAGTCTTCCCTGTTTATATCAGCAGCAAATATGAGGCAC---------------------GGCAGAGAGA--------------------------------------AAAGCC--------------------AGCGCACCAT--------------------GGGGAGAGGAA---GCAAACGCAG-GAGGGATG---GGGTAAGAGAGG-------CCAGCT------------------GCAGAGAGAGAAG---AGTGGAGAGAGGAGAGAGTCACACAGAGAAGGGGGAACAAAAACCAAGGAGAATGAGACACTAAGAGGACAACAGAGGCAGCAAAATACATTAAAAAGAGAAC-CAAAACACATACCCATG--TGCATGAGAACACACACAGACGAGAAAGAGAACCTTTGGGAAAGGCTCTAAAAGCCAGAGTGTGATAGAGGCACCCACCCAGGGAGTGAGAAacacacacaca-cacacacacacacaca-----------cacacacaGCCCCAATGCAAACCCTGACAGAGATGGAGGGAGAC-------AGATACAAGTCGG-ACAGACGGAGG-GGAAAAATGGAGTGCAGGGCAGAGA-GGGA-AAAAAAGACACAGA----AGGAAAG-AAAAAAGATAGGAAGAGATTAACACACAC--ACAATTTTCGATGGGAAGAGGCAGCAGAGGAGCCACAGATGCCAGAGCTGCAGAGCT-GGAGCTTGTACCTTCCCCTCCCCACCTCTCGCTCCA-TCCACCACCGCCTGATTCTGCTCACAGCAGCCTGAGATGGA-----AGCCCC-AGTGGAGAAGTTAATTCTCCTGAGTCCAGTTACCAAGAAGCGCTCTGCATTCCACCCGCGTGCCCTTAGCGACACAGAGGTGGGGGCGGGAGGTGCATCTGCACCGAGCACAGGTTTCTTCTCCTCTTGTCTTAGCTTTGAACCAGGTGCCCTGATGGAAGGACACAGACCAGCCCAGCATTTGATCATCAAGCCCACACC-CAGAGCCATGTAAGCA-----GCT-ATCTCTGAGCCATGAGTGGTTGGAAGTGGACATAACACGTAGCCCCTCAAA---TGCCCAAAGGATGCCCACCAGGGACAAGATGCAGCCCCTGCACTAGGGA-CCCCTACAC-Gggaggcagacagtcctgggtccacatgtcccttgctgcttcc-tgcctgtgatgagtccccca-----aactctctaaacctttatgttcacctctgtgaaatgggCTC i calJac3.chr7 C 0 I 3 s canFam3.chr2 15002384 1025 - 85426708 TCCTTTCCTGAGTAC----CTGCTGAG------------GGCAGCCACAGGCT-GGGCTGATTCTTCCCAGGAATGTGAGGCCTTAGTCC--TCAGAGGTTCTCAGGATTCACTGTAGAT-CCAGCAGCAAACCTGGGGTGG---------------------GG-------------------------------------------------GCC-----------------------------T--------------------GGAGAGAGGGA---GCAAGTTAGA-GGAGGATGAATGGGGGAGAGAGGAAGGGAACCAAC-------------------ACAGAGAGGAAAGCCAGGAGGGAAAAGGAAAGAGATTCACA-AGAGGGG----------CCGAGG-----GCGGTACCTAGAGGGAGATAAAGGCAGAAAAATACCTAAGAAGGGG-----AAGACACAGAAACATACCCGCGAACACACCCACACACGCGGATGAGGGAGCCTCTGGGAG-------AAGGGA--GGACGCGAAAG-----CCTGACCACGCAGAAAGA-------------TAG------------------------GAGGAACAACCCCCACCGCTGCCCCAAC--------------AC-------TGGCACCAGCCAG-GCCAAGGGCGC-G---ATGCGGGGTG-GGGATACAGA-AGGA-GAAGGGGACATGGACAGCAAGACTGAAAAAAAGAAAGGGAGAGATCAGTACATGG--G---------GTGGGGAG-GGCAGCAGAG-------------------------GCT--GAGCTCACACCTCCCCCCGCCC---------------CTGCCACCTGCTGACCCGGCTCCCAGGTCCCAGGGAAGGACAGGGAAATGTCATGGGGGGGGTGAACTACCCTGGGCCCAGCCCTCCAG---CAGTCCACCTTCCACCCCAACGCCCCTC---ACCCAGAGCGGGT---TAAGGGGTCGTCTGCCCTGAGCAGGGGCCTCCATTCCTCCT-CCTTCACCTTGAACCCAAGGCACTGATGGCAGGAGAGAGACCTGCCCA-CCCCTGCTCACCCAGCTCCGGCCTCGGAGCCCGCTCGTTCTCCCTGCTGACTGCTAGGCCACGGG-GGCTGGAGGAGGGCACAACCCCCAAGCCTT-------CACCTTGGGGGGAGCCCCCA--CCCAGGAAGCAGTC---ACAC-----A-CCCCCACCCCACCTGAC-CCCA--Cctcagctcagatgccccttcctggctgcatggctgtggtgagtcacccg-----acctctctaagccacaaagtccacctctgtgcaatggggac i canFam3.chr2 I 579 I 21 e mm10.chr4 25427104 294 - 156508116 I a score=160185.000000 s hg38.chr1_KI270760v1_alt 60505 60 + 109528 GTATTCCTGCAGCCGGGTCAGCTGAGTTGGAGGAGAGTTGCTGACTCCTC-------TTCAGTGGTG s panTro4.chr1 30497067 60 + 228333871 gtattcctgcAGCCGGGTCAGCTGAGTTGGAGGAGAGTTGCTGACTCCTC-------TTCAGTGGTG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30085399 60 - 229942017 gtattcctgcAGCCGGGTCAGCTGAGTTGGAGGAGAGTTGCTGACTCCTC-------TTCAGTGGTG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33381518 60 + 229590362 GTATTCCTGCAGCCGGGTAAGCTGAGTTGGAGGAGAGTTGCTGACTGCTC-------TTCAGGGGTG i rheMac3.chr1 I 3 C 0 s macFas5.chr1 29892770 60 - 227556264 GTATTCCTGCAGCCGGGTAAGCTGAGTTGGAGGAGAGTTGCTGACTGCTC-------TTCAGGGGTG i macFas5.chr1 I 3 C 0 s papAnu2.chr1 32656160 60 + 220367699 GTATTCCTGCAGCCGGGTAAGCTGAGTTGGAGGAGAGTTGCTGACTGCTC-------TTCAGGggtg i papAnu2.chr1 I 3 C 0 s chlSab2.chr20 28172469 60 - 130588469 GTATTCCTGAAGCCAGGTAAGCTGAGTTGGAGGAGAGTTGCTGACTCCTC-------TTCAGGGGTG i chlSab2.chr20 I 3 C 0 s calJac3.chr7 64631028 59 + 155834243 ATGTTCCTGCAG-CAGGTAAGCTGAGTTGTAGGACAATTGCTGACTCCTC-------TTCAAGGGTG i calJac3.chr7 I 3 C 0 s canFam3.chr2 15003430 67 - 85426708 gtgctccaacagccaagtgagCAGCATTGGAGGAGAGTTGCTGACTCCCCTCTCCTTTTCTGGGGTT i canFam3.chr2 I 21 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 527666 10343 - 28733288 I a score=334242.000000 s hg38.chr1_KI270760v1_alt 60565 112 + 109528 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCTGGGGAAGGCCCCAAACCTCATCCCCAGGAGGTCTGCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCTTGGAGGCAGG s panTro4.chr1 30497127 112 + 228333871 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCTGGGGAAGGCCCCAAACCTCATCCCCAGGAGGTCTGCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCTTGGAGGCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30085459 112 - 229942017 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCTGGGGAAGGCCCCAAGCCTCATCCTCAGGAGGTCTGTCTGCCTGGCATTTTACAAGGCAGTGGGCCTCTTGGAGGCAGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 538009 107 - 28733288 aaaGG---CAA--AGGAAGAGGCAAATGTCTAACCCT---GAATGTTCCAAACTGCATCCCCAGGAGATGTGATTACCTGGTATTTTCCAGGGCAGTGGGGCTTTAAGATGCAGG i nomLeu3.chr24 I 10343 I 345 s rheMac3.chr1 33381578 112 + 229590362 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCCGGGGAAGACCCCAGACCTCATCCCCAGGAGGTCTTCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCCTGGAGGCAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29892830 112 - 227556264 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCCGGGGAAGACCCCAGACCTCATCCCCAGGAGGTCTTCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCCTGGAGGCAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32656220 112 + 220367699 aaagg---aaatgaagaaaagaaatttgtctCATCCAGGGGAAGACCCCAAACCTCATCCCCAGGAGGTCTTCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCCTGGAGGCAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28172529 112 - 130588469 AAAGG---AAATGAAGAAAAGAAATTTGTCTCATCCCGGGGAAGATCCCAAACCTCATCCCTAGGAGGTCTTCCTGCCTGGCATTTTACAAGGCAGTGGGCCTCTTGGAGGCAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64631087 112 + 155834243 AAAGG---AAATGAAGAAAAGAAAATAGTCTCATCCCAGGGAAGGCCCCAGACCTCATCCCCGGGAGGTCTGCCTGCCTGGCATTTTACAAGGCAGTAGGCCTCTCAGAGGCAGG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15003497 104 - 85426708 AAAGGGGAAAAAAAAGAAGAGGCAAAGGTCCAATTCC---AAGTACCCCAAAGTGCATCCCCAAGAAGT----CTGTCTGGTGTTTTCCAAGTCAGTGGGTCTTTCCCAGG---- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I a score=18132.000000 s hg38.chr1_KI270760v1_alt 60677 6 + 109528 GAGCCG s panTro4.chr1 30497239 6 + 228333871 GAGCCG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30085571 6 - 229942017 GAGCCG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33381690 6 + 229590362 GAGCCG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29892942 6 - 227556264 GAGCCG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32656332 6 + 220367699 GAGCCG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28172641 6 - 130588469 GAGCCG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64631199 6 + 155834243 AAGCCG i calJac3.chr7 C 0 I 436 s canFam3.chr2 15003601 6 - 85426708 GAACCA i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538116 345 - 28733288 I a score=30825.000000 s hg38.chr1_KI270760v1_alt 60683 105 + 109528 AGATCAAAAGTACATCAGACATTGCACCAGACAAGGTGACTTGCCCCCCACCCCCCTTGGATTGGCAAGGTGTTCTTTCCAG--AATAACTGCCAAGATCCCCCTCC s panTro4.chr1 30497245 105 + 228333871 AGATCAAAAGTACATCAGACATTGCACCAGACAAGGTGACTCGCCCCCCACTCCCCTTGGGTTGGCAAGGTGTTCTTTCCAG--AATAACTGCCAAGATCCCCCTCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30085577 105 - 229942017 AGATCAAAAGTACATCAGACATTGCACCAGACAAGGTGACACACCCCCCACCCCCCTTGGGTTGGCAAGGTGTTCTTTCTAG--AATAACTGCCAAGATCCCCCTCC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33381696 33 + 229590362 AGGTCAAAAGTACATCAGACATC---------------------------CCTCCGCTGG----------------------------------------------- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29892948 33 - 227556264 AGGTCAAAAGTACATCAGACATC---------------------------CCTCCGCTGG----------------------------------------------- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32656338 33 + 220367699 AGGTCAAAAGTACATCAGACATC---------------------------CCTCCGCTGG----------------------------------------------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28172647 33 - 130588469 AGGTCAAAAGTACATCAGACATC---------------------------CCTCCGCTGG----------------------------------------------- i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15003607 52 - 85426708 AAGTCGAAAGCGTACCGAACACC---------------------------TCCATTCTGG--------CCGGTTCTCTCTGGCCACT-------------------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538116 345 - 28733288 I e calJac3.chr7 64631205 436 + 155834243 I a score=816454.000000 s hg38.chr1_KI270760v1_alt 60788 353 + 109528 CCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AAGATTAGAAAGGCAGTGCTAATTTAATTTGCCAGAATGAATAAAGATAAGACAGTGACTCAGGGTGATGAAGTGCTGGGAGCCCATAATTCACATGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTCAGCCAGGACAGCCTCGGTTTACTGTCT----CTGTCGCTGAGGAAGGCTGGCTTCCCCGCCTAGGCAGTGGGTGTGA-G-AGGCTTATAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCGGAGATCTGTGGGTCCTTCTAGTGCCCATGG-CTGCCACCAGGATGTGGGGAGGGAGCACTCAGAtcattcattcat s panTro4.chr1 30497350 353 + 228333871 CCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AAGATTAGAAAGGGAGTGCTAATTTAATTTGCCAGAATGAATAAAGATAAGACAGTGACTCAGGGTGATGAAGTGCTGGGAGCCCATAATTCACACGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTCAGCCAGGACAGCCTCGGTTTACTGTCT----CTGTCGCTGAGGAAGTCTGGCTTCCCCGCCTGGGCAGTGGGTGTGA-G-AGGCTTATAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCGGAGATCTGTGGGTCCTTCTAGTGCCCATGG-CCGCCACCAGGATGTGGGGAGGGAGCACTCAGATCATTCATTCAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30085682 350 - 229942017 CCAGTTCTCTCTTTGCCACTGTTATAG------CTCTGGAGAA-AAGATTGGAAAGGCAGTGCTAATTTAATTTGCCAGAATGAATAAAGATAAGACGGTGACTCAGGGTGATGAAGTGCTGGGAGCCCATAATTCACACGCCTGACA----------------------------GCCC-------------------ACGTTGGAGCTGATTCAGCCAGGACAGCCTCGGTTTACTGTCT----CTGTCTCTGAGGAAGGCTGGCTTCCCCGGCTGGGCAGTGGGTGTGA-G-AGGCTTGTAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCGGAGATCTGTGGGTCCTTCTAGCGCCCATG----GCCACCAGGGTGTGGGGAGGGAGCACTCAGATCATTCATTCAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 538461 390 - 28733288 CCAATTCCCTCTTTGCTGCTGTTGTTTAATTTCTCCTGGAGAATAAGATTGGAAAGGCAGTGCTAATTCAATTTGCCAGAATGAATAAAGATAAGACAGCAACGGAGGGTGATGAAGCACTGGGAACACATAATTCACATCCCCAAAACCCAGTCTCCTTCCATCACAACTGCCTTCCCC-------------------ATGCTGGAGCTAATTAAGCCAGAATGATGGCGGTTAATTATTTTCCGCTGTGGCTGGGGAAGGCTGGCTTCGCTGGCCAGGCAGTGGGCATGAGG-AGGTTTGTAAAAGGGCAAATCAGATTAA----AAGAAGGAACAGGGGCTTGTGGATCCCCTGGGGGCTCACAGATCTCCCTTATGGCGGAGGGAGGTGGCACTTAAATGACATGTTCAT i nomLeu3.chr24 I 345 I 372 s rheMac3.chr1 33381729 350 + 229590362 TCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AATATTGGAAAGGCAGCGCTAATTTAATTTTCCAGAATGAATAAAGATAAGACAGTGACTCAGGGTGATGAAGGGCTGGGGGCCCATAATTCACACGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTAAGCCAGGACAGCCTCCGTTTAGTGTCT----CTGTTGCTGAGGAAGGCTGGCTTCCCCGGCAGGGCAGTAGGCGTGA-A-AGGCTTGTAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCAGAGATCTACGGATCTTTCTAGTGCCCATGG----CCACCAGAATGTGGGGAGAGAGCGCTCAGATCATCCATTCAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29892981 350 - 227556264 CCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AATATTGGAAAGGCAGCGCTAATTTAATTTTCCAGAATGAACAAAGATAAGACAGTGACTCAGGGTGATGAAGGGCTGGGAGCCCATAATTCACACGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTAAGCCAGGACAGCCTCCGTTTAGTGTCT----CTGTTGCTGAGGAAGGCTGGCTTCCCCGGCAGGGCAGTAGGTGTGA-A-AGGCTTGTAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCAGAGATCTACGGATCTTTCTAGTGCCCATGG----CCACCAGAATGTGGGGAGAGAGCGCTCAGAtcatccattcat i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32656371 350 + 220367699 CCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AATATTGGAAAGGCAGCGCCAATTTAATTTTCCAGAATGAATAAAGATAAGACAGTGACTCAGGGTGATGAAGGGCTGGGAGCCCATAATTCACACGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTAAGCCAGGACAGCCTCGGTTTATTGTCT----CTGTTGCTGAGGAAGGCTGGCTTCCCCGGCAAGGCAGTAGGCGTGA-A-AGGCTTGTAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCAGAGATCTATGGATCTTTCTAGTGCCCATGG----CCACCAGAATGTGGGGAGAGAGCGCtcagatcatccattcat i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28172680 350 - 130588469 CCAGTTCTCTCTTTGCCACTATTGTGG------CTCTGGAGAA-AATATTGGAAAGGCAGCGCTAATTTAATTTTCCAGAATGAATAAAGATAAGACAGTGACTCAGGGTGATGAAGGGCTGGGAGCCCATAATTCACACGCCTGATA----------------------------GCCC-------------------ACGTTGGAGCTGATTAAGCCAGGACAGTCTCGGTTTATTGTCT----CTGTCGCTGAGGAAGGCTGGCTTCCCTGGCAGGGCAGTAGGCGTGA-G-AGGCTTGTAAATGGGCAAATGAGTTTAAGGGGAGGAAGGAGCAGAGATCTGTGGATCTTTCTAGTGCCCATGG----CCGCCAGAATGTGGGGAGAGAGCGCTCAGATCATCCATTCAT i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15003659 340 - 85426708 GCTGTTTAATCCTT-------------------CCCGCAAAGC-AAGGTTAGAAAGATGGTGCTAATTTAATTTGCCAGAAGGAATCAAGACAGGACAGGAGGCACGGGTGATGAAGCGCT-GGAGCACATAATTCACAT-CCCGATG----------------------------CCCCGTCCAGGAGCCCTGTCCCGATGCTCCAGCTGATTAAGCCAGAAGAATCTCCATTTCCTTCCC----CTGTCACTGGGGAAGGCTGGCCTCCCGGGCTACACAGCA-GTGTGA-GCAGGTGCGTGAAAGAGCAGATGAGATCAAGGGGAGGAAGAAGCAGAGGTCTCTGGGGC-TTCTGGTGCCCGTGG----TCACTATGTTG-GGGTTGGGGGTACCCAAA------------ i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e calJac3.chr7 64631205 436 + 155834243 I a score=646965.000000 s hg38.chr1_KI270760v1_alt 61141 337 + 109528 gatcacgcagcactcattcactcattcatGATCATTTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAAGTGGAGGGTGTTTTGGGATCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGGGATAC--CTGGGCACCGGGATTACCTGTGTCCACGAGGGCACATGCATCACTGCACATGGGAATTTGTGTCATCAGTGAAAC-AGGAGTGCATTCTCAATGCCCATGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCGCTCATCAGCATATGCAGGGCTCTGACATgctctgctgcttactagctgtgtga s panTro4.chr1 30497703 335 + 228333871 GATCATGCAGCACTCATTCACTCATTCATGATCATTTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAAGTGGAGGGTGTTTTGGGATCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGG-ATAC--CTGGGCACCGGGATTAGCTGTGTCCACGAGG-CACGTGCATCACTGCACATGGGAATTTGTGTCATCAGTGAAAC-AGGAGTGCATTCTCAATGCCCATGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCGCTCATCAGCATATGCAGGGCTCTGACATgctctgctgcttactagctgtgtga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086032 337 - 229942017 GATCAGGCAGCACTCATTCACTCATTCATGATCATTTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAAGTGGAGGGTGTTTTGGGATCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGGGATAC--CTGGGCACTGGGATTAGCTGTGTCCACGAGGGCACAGGCATCACTGCACATGGGAATTTGTGTCATCTGTGAAAC-AGGAGTGCATTGTCGATGCCCATGGGCAGGGCTTGTTGGTGTGGGGCCACCTAGATATACACAGGGCTCGCTCATCAGCATATTCAGGGCTCTAACATgctctgctgcttaccagctgtgtga i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33382079 337 + 229590362 GATCACGCAGCATTCATTCACTCATTCATCATCATTTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAGGTGGAGGGTGTTTTGGGGTCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGGAACAC--CTGGGCACCGGGATTAGCTGTGTCCATGAGGGCACGTGCATCACTGCACATGGGAATCTGTGTCATCAGTGAAAC-AGGAGTGCATTCTCAATGCCCGTGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCCCTCATCAGCATATGCAGGGCTCCAACATgctctgctgcttactagctgtgtgg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29893331 337 - 227556264 gatcacgcagcattcattcactcattcatcatcattTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAGGTGGAGGGTGTTTTGGGGTCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGGAACAC--CTGGGCACCGGGATTAGCTGTGTCCATGAGGGCACGTGCATCACTGCACATGGGAATCTGTGTCATCAGTGAAAC-AGGAGTGCATTCTCAATGCCCGTGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCCCTCATCAGCATATGCAGGGCTCCAACATgctctgctgcttactagctgtgtgg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32656721 328 + 220367699 gatcacgcagcattcattcactcattcatcatcattTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAGGTGGAGGGTGTTTTGGGGTCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTG---------CAC--CTGGGCACCGGGATTAGCTGTGTCCATGAGGGCACGTGCATCACTGCACATGGGAATCTGTGTCATCAGTGAAAC-AGGAGTGCATTCTCAATGCCCGTGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCCCTCATCAGCATATGCAGGGCTCCAACATGCTCtgctgcttactagctgtgtgg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28173030 333 - 130588469 GATCACGCAG----CATTCACTCATTCATGATCATTTTACCAAGCAGCCCCCTGGGCCTGGAGTGGGGCATAGCTGGAGGGTGTTTTGGGGTCCATCATTAAATCCAAAGGCCATCTGGCCAGGCTGCATCAGGAATAC--CTGGGCACCGAGATTAGCTGTGTCCGTGAGGTCACGTGCATCACTGCACATGGGAATCTGTGTCGTCAGTGAAAC-GGGAGTGCATTCTTGATGCCCATGGGCAGGGCTTGTTGGTGTGGGGACACCTAGATATACACAGGGCTCCCTCATCAGCATATGCAGGGCTCCAACATgctctgctgcttactagctgtgtgg i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15003999 306 - 85426708 GAACA-------------CATTTGTTAATGGTTGTTTCATCAGACAA-TCCCTGGGATTGGAGTGGGG-ATGTGTGAGGTGTATTTGCAAGTGGATC----GATCCA-----CTTGTGGGGAAAGCGTTGCTAGAACACAGAGGGGCACATGCATC--CCGTGAACACAAAGGC-TTTTCATTAGCCCACGCAGG-GTGTGTGTCATCAGTGAGACAAGGAGTAAGTCCCTCGGGCCATTGAGCAGGGC---TTGGGGTGGGGGGCCCCCGGTTCATATGGGGCTGG--CATCAGTGTGCACAGGGGTA-GGCGTgctctggggcttagtagctctgtga i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538851 372 - 28733288 I e calJac3.chr7 64631205 436 + 155834243 I a score=7236.000000 s hg38.chr1_KI270760v1_alt 61478 39 + 109528 actggggggagctttttttttttttttt----gagacagagtc s panTro4.chr1 30498038 43 + 228333871 actggggggagcttttttttttttttttttttgagacagagtc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086369 40 - 229942017 actggggggagcttcttttttttttttt---tgagacagagtc i ponAbe2.chr1 C 0 C 0 s canFam3.chr2 15004305 15 - 85426708 gctgaggggagagtc---------------------------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538851 372 - 28733288 I e calJac3.chr7 64631205 436 + 155834243 I e chlSab2.chr20 28173363 0 - 130588469 C e rheMac3.chr1 33382416 0 + 229590362 C e papAnu2.chr1 32657049 0 + 220367699 C e macFas5.chr1 29893668 0 - 227556264 C a score=57656.000000 s hg38.chr1_KI270760v1_alt 61517 224 + 109528 ttgctctgtcgctcaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccatgcccggctaattttttgtatttttagtagagacggggtttcacagtgttagccaggatggtctcaatctcctgacctcgtgatccgcccacctcgg s panTro4.chr1 30498081 224 + 228333871 ttgctctgtcgctcaggctggagtgcagtggcacaatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggctaattttttctatttttagtagagacggggtttcacagtgttagctaggatggtctcgatctcctgacctcgtgatccgcccacctcgg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086409 219 - 229942017 tcgctctgtctcccaggttgg-----agtggcacgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcggcctctcgagtagctgggactacaggcgcccgccaccacgcccggctaagtttttgtatttttagtagagacggggtttcaccgtgttagtcaggatggtctcaatctcctgacctcgtgatccgcccgcctcgg i ponAbe2.chr1 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538851 372 - 28733288 I e canFam3.chr2 15004320 0 - 85426708 C e calJac3.chr7 64631205 436 + 155834243 I e chlSab2.chr20 28173363 0 - 130588469 C e rheMac3.chr1 33382416 0 + 229590362 C e papAnu2.chr1 32657049 0 + 220367699 C e macFas5.chr1 29893668 0 - 227556264 C a score=10408.000000 s hg38.chr1_KI270760v1_alt 61741 46 + 109528 cctcccaaagtgttgagattacaggcgtgagccaccacacccgacc s panTro4.chr1 30498305 46 + 228333871 cctcccaaagtgttgagattacaggcgtgagccaccacacccgacc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086628 46 - 229942017 cctcccagagggctgagattacaggcgtgagccaccacgcccggcc i ponAbe2.chr1 C 0 C 0 s canFam3.chr2 15004320 20 - 85426708 cttctcaaagcctcagggtt-------------------------- i canFam3.chr2 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538851 372 - 28733288 I e calJac3.chr7 64631205 436 + 155834243 I e chlSab2.chr20 28173363 0 - 130588469 C e rheMac3.chr1 33382416 0 + 229590362 C e papAnu2.chr1 32657049 0 + 220367699 C e macFas5.chr1 29893668 0 - 227556264 C a score=26350.000000 s hg38.chr1_KI270760v1_alt 61787 14 + 109528 actggggggagctt s panTro4.chr1 30498351 14 + 228333871 actggggggagctt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086674 14 - 229942017 actggggggagctt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33382416 14 + 229590362 actagggggagctt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29893668 14 - 227556264 actagggggagctt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32657049 14 + 220367699 acTGGGGGGAGCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28173363 14 - 130588469 actgggaggagctt i chlSab2.chr20 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e nomLeu3.chr24 538851 372 - 28733288 I e canFam3.chr2 15004340 0 - 85426708 C e calJac3.chr7 64631205 436 + 155834243 I a score=7644.000000 s hg38.chr1_KI270760v1_alt 61801 3 + 109528 att s panTro4.chr1 30498365 3 + 228333871 att i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086688 3 - 229942017 att i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 539223 3 - 28733288 att i nomLeu3.chr24 I 372 C 0 s rheMac3.chr1 33382430 3 + 229590362 att i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29893682 3 - 227556264 att i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32657063 3 + 220367699 ATT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28173377 3 - 130588469 att i chlSab2.chr20 C 0 C 0 e mm10.chr4 25427104 294 - 156508116 I e canFam3.chr2 15004340 0 - 85426708 C e calJac3.chr7 64631205 436 + 155834243 I a score=50112.000000 s hg38.chr1_KI270760v1_alt 61804 22 + 109528 acttctctaagcctcaa---tgtct s panTro4.chr1 30498368 22 + 228333871 acttctctaagcctcaa---tgtct i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086691 22 - 229942017 acttctctaagcctcaa---tgtct i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 539226 22 - 28733288 gcttctgtaagcctcag---tgact i nomLeu3.chr24 C 0 I 1 s rheMac3.chr1 33382433 22 + 229590362 acttctctaagcctcaa---tgact i rheMac3.chr1 C 0 I 6 s macFas5.chr1 29893685 22 - 227556264 acttctctaagcctcag---tgact i macFas5.chr1 C 0 I 6 s papAnu2.chr1 32657066 22 + 220367699 ACTTCTCTAAGCCTTAA---TGACT i papAnu2.chr1 C 0 I 6 s chlSab2.chr20 28173380 22 - 130588469 acttctttaagcctcaa---tgact i chlSab2.chr20 C 0 I 6 s mm10.chr4 25427398 25 - 156508116 ACTTCTGTAAGCCTCAGTCCTGTCT i mm10.chr4 I 294 C 0 s canFam3.chr2 15004340 7 - 85426708 -ctcatct----------------- i canFam3.chr2 C 0 C 0 e calJac3.chr7 64631205 436 + 155834243 I a score=2239989.000000 s hg38.chr1_KI270760v1_alt 61826 710 + 109528 gtagagtaaggatagtcatagcacccactttacagagttctggt--------gaggacta---agagagtgcct-gaaagaacccagctcggcatccggcccacaggaagggctccatgaTCATGAGTTATGACCCA--TGTT-ATTTCATGATGATCATGTGAATTCTTCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGGCCCACTGGGCTGGTTCATGCACTTCATGGAGAGTTGCTCTTATGGCCACAGGG-GAGACCTTCCTGTCACGTCCCAGG-TGCTCTTTCTTCCTCCTTTGTGGCTGAGACAATGAGGGCTTGGTGCCTGGCTGGGAGGGAAGGA-AAGAAGGTGGAGAGCCAGCCTCTCCTTCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTGGCAGTCTGCTTTGATGGAACTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAGGGCTGGGAGCCCCAGAAAT-GAGAGGCTGGAGGCTGGAAAAGAAGGGGATGAAAATGGCCCAGAGAACAGCAATTT-AAATGCAACCAAAGCATGAATACTTCTGCCAGGGACCGGGGTTTCCATTCACATGGAATGAAGGA-CCCACGA--------TGCAGGTGCCTTGTCTGGCTGATGGAGCAGGGGAAGGAAATCC---CCAC-------------AGGGGCC--------AAGCCTC----GGTGGGCTGGGTTTTCATTTCTTTTGTTGTGTAGTCTAAAGTAGGA--ACCACTGG s panTro4.chr1 30498390 711 + 228333871 gtagagtaaggatagtcatagcacccactttacagagttccggt--------gaggacta---agagagtgcct-gaaagaacccagctcggcacccggcccacaggaagggctccatgatcatgagttatgatCCA--TGTT-ATTTCATGATGATCATGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGGCCCACTGGGCTGGTTCATGCACTTCATGGAGAGTTGCTCTTATGGCCACAGGG-GAGGCCTTCCTGTCAGGTCCCGGGGTGCTCTTTCTTCCTCCTTTGTGGCTGAGACAATGAGGGCTTGGTGCCTGGCTGGGAGGGAGGGA-AAGAAGGTGGAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTGGCAGTCTGCTTTGATGGAACTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAAGGCTGGGAGCCCCAGCAAT-GAGAGGCTGGAGGCTGGAAAAGAAGGGGATGAAAATGGCCCAGAGAACAGCAATTT-AAATGCAACCAAAGCATGAATACATCTGCCAGGGACCGGGGTTTCCATTCACATGGAATGAAGGA-CCCACGA--------TGCAGGTGCCTTGTCTGGCTGATGGAGCAGGGGAAGGAAATCC---CCAC-------------AGGGGCC--------AAGCCTC----GGTGGGCTGGGTTTTCATTTCCTTTGTTGTGTAGTCTAAAGTAGGA--ACCGCTGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30086713 710 - 229942017 gtagagtaaggatagtcatagcacccactttacagagttctggt--------gagaacta---agagagtgcct-gaaagaacccagcttggcacctggcccacaggaagggctccatgaCCATGAGTTATGATCCA--CGTT-ACTTCATGACGATCATGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGGCCCACTGGGCCGGTTCATGCGCTTCATGGAGAGTTGCTCTTATGGCCACAGGG-GAGACCTTCCTGTCATGTCCCAGG-TGCTCTTTCTTCTTCCTTTGTGGCTGAGACAATGAGAGCTTGGTGCCTGGCTGGGAGGGAGGGA-AAGAAGGTGGAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTGGGACTTTATGGAAAGCTGGCAGTCTGCTTTGATGGAACTGAAGGCAATTTGCAGCAACACAAAAGGGTGCGTT--------AGAAAGGGAGGGCTGGGAGCCTCAGCAGT-GAGAGGCTGGAGGCTGGAAAAGAAGGGGATGAAACTGGCCCAGAAAACACCAATTT-AAATGTAACCAAAGCACGAATACATCTGCCAGGGACTGGGGTTTCCATTCACATGGAATGAAAGA-CCCACGA--------TGCAGGTGCCTTGTCTGGCTGATGGAGCAGGGGAAGGAAATCC---CCAC-------------AGGGGCC--------AAGTCTC----GGTGGGCTGGATTTTCATTTCCTTTGTTGTGTAGTCTGAAGCAGGA--ACCATTGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 539249 701 - 28733288 gtagagtagggatagtcacaacacccgctttactgagttttgat--------gaggacta-agagagagtgcct-gaaagagcccagctcagcacccagcccatgggaagggctc--taatcatgagttatgatCCA--TGTT-ATAGTATGATGATCACATGGCTTCTCCTTTCTGA-----------------------GTGCACGTGGA--------------------------------------------------------------------AGGTGGGCCCTCTGGGCTGGTTCATGCGCTTCAGGGAGAGTTGTATTTATGGCCATAGGG-GAGACCTTCCTGTC-----------TCTTTTGTGATCCTCCTTTGTGACTCAGATAATGAGTACTTGGTGCCTTGCTAGGAAGGAGGGA-AAGAAGGTGGAGAGCCAGGCGCTCCTTCAGGGCCAGGAAATGTGGACTTTATGGAAAGCTGGCAGTCTGCTTTGCTGAAATTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAGGTCTGGGAGCCCCAGCAACGGGGAGGCTGGAGGCTGGAAAAGAAGGGGATGAAACTGACCCAGAAAACAGCAATTT-AAATGCAACCAAAGCACGAACACAGCTGCCAGGGACCGGGGTTTCCATTCACATGGAACGAAGGA-CCCAGGA--------TGCAGATGCCTTGTCTGGCTGATGGAGCAGGGGAAGGAAATCC---CCAC-------------GGGGGCC--------AAGCCTC----GGTGGGCTGGGCTTTCATTTCCTTTTTCATGGAGTCCAAAATGAGA--ACAGCTGG i nomLeu3.chr24 I 1 I 934 s rheMac3.chr1 33382461 719 + 229590362 gtagagtaaggatagtcatagtactcactttacagagttctcagagtttacagagaacta---agagagtgcct-gaaagagcccagctcagcacccggcccacaggaagggctccatgaTCATGAGTTATGATCCA--TGTT-ATTTCATGATGATCGTGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGACCCACTGAGATGGTTCATGCGCTTCGTGGAGAGTTGCTCTTATGGCCATAGGG-GAGACCGTCCTGTCACATCCCAGG-TGCTCTTTCTTCCTCCTTTGTGGCTGAGACCATGAGGGCTTGGCGCTTAGCTGGGAGGGAAGGA-AAGAAGGTGAAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTGGCAGTCTGCTTTGCTGAAATTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAGGGTCGGGAGCCCCAGCAAT-GGAAGACTGGAGGCTGGAAAAGAAGGGAATGAAACTGGTCCGGAGAAGAGCAATTTAAAATACAACCAAAGCACGAACACATCTGCCAGGGACCGGGGTTTCCATTCACATGGAATGAATGA-CCCACAA--------GGCAGGTGCCTTGTCTGGCTGGTGGAGCAGAGGAGGGAAATCC---CTAC-------------AGGGACC--------AAGCCTC----AGTGGGCTGGGCTTTCATTTCCATTGTTGTGCAGTCTAAAGTAGGA--ACCATTGG i rheMac3.chr1 I 6 C 0 s macFas5.chr1 29893713 719 - 227556264 gtagagtaaggatagtcatagtactcactttacagagttttcagagtttacagagaacta---agagagtgcct-gaaagagcccagctcagcacccggcccacaggaagggctccatgaTCATGAGTTATGATCCA--TGTT-ATTTCATGATGATCGTGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGACCCACTGAGATGGTTCATGCGCTTCGTGGAGAGTTGCTCTTATGGCCATAGGG-GAGACCGTCCTGTCACATCCCAGG-TGCTCTTTCTTCCTCCTTTGTGGCTGAGACCATGAGGGCTTGGCGCTTAGCTGGGAGGGAAGGA-AAGAAGGTGAAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTGGCAGTCTGCTTTGCTGAAATTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAGGGTCGGGAGCCCCAGCAAT-GGAAGACTGGAGGCTGGAAAAGAAGGGAATGAAACTGGTCCGGAGAAGAGCAATTTAAAATACAACCAAAGCACGAACACATCTGCCAGGGACCGGGGTTTCCATTCACATGGAATGAATGA-CCCACAA--------GGCAGGTGCCTTGTCTGGCTGGTGGAGCAGAGGAGGGAAATCC---CTAC-------------AGGGACC--------AAGCCTC----GGTGGGCTGGGCTTTCATTTCCACTGTTGTGCAGTCTAAAGTAGGA--ACCATTGG i macFas5.chr1 I 6 C 0 s papAnu2.chr1 32657094 719 + 220367699 GTAGAGTAAGGATAGTCATAGTACTCACTTTACAGAGTTCTGAGAGTTTACAGAGAACTA---AGAGAGTGCCT-GAAAGAGCCCAGCTCAGCACCCGGCCCACAGGAAGGGCTCCATGATCATGAGTTATGATCCA--TGTT-ATTTCATGATGATCGTGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGACCCACTGAGATGGTTCATGCGCTTCGTGGAGAGTTGCTCTTATGGCCATAGGG-GAGACCGTCCTGTCACATCCCAGg-tgctctttcttcctcctttgtgGCTGAGACCATGAGGGCTTGGCGCTTAgctgggagggaagga-aagaaggtgaAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTGTCAGTCTGCTTTGCTGAAATTGAAGGCAATTTGCAGCAACACAAAAGGGTGCATT--------AGAGAGGGAGGGTCGGGAGCCCCAGCAAT-GGAAGACTGGAGGCTGGAAAAGAAGGGAATGAAACTGGTCCGGAGAAGAGCAATTTAAAATACAACCAAAGCACGAACACATCTGCCAGGGACCGGGGTTTCCATTCACATGGAATGAATGA-CCCACAA--------GGCAGGTGCCTTGTCTGGCTGGTGGAGCAGAGGAGGGAAATCC---CTAC-------------AGGGACC--------AAGCCTC----GGTGGGCTGGGCTTTCATTTCCATTGTTGTGCAGTCTAAAGTAGGA--ACCATTGG i papAnu2.chr1 I 6 C 0 s chlSab2.chr20 28173408 720 - 130588469 gtagagtaaggatagtcatagtactcactttacagagttctgagagtttacagagaacta---agagagtgcct-gaaagagcccagctcagcacccggcccacaggaagggctccatgaTCATGAGTTATGATCCA--TGTT-ATTTCATGATGATCGTGTGAATTCTCCTTCCTGG-----------------------GTGCGCGTGGA--------------------------------------------------------------------AGGTGGACCCGCTGAGATGGTTCATGCGCTTCGTGGAGAGCTGCTCTTATGGCCATAGGG-GAGACCGTCGTGTCACATCCCAGG-CGCTCTTTCTTCCTCCTTTGTGGCTGAGACCATGAGGGCTTGGTGCCTGGCTGGGAGGGAGGGA-AAGAAGGTGGAGAGCCAGCCGCTCCTCCAGGGCCAGGAAATTTGGACTTTATGGAAAGCTAACAGTCTGCTTTGCTGAAATTGAAGGCAATTTGCAGCCACACTAAAGGGTGCATT--------AGAGAGGGAGGGCCGGGAGCCCCAGCAAT-GGGAGACTGGAGGCTGGAAAAGAAGGGAATGAAACTGGTCCGGAGAAGAGCAATTTGAAATGCAACCAAAGCACGAACACATCTGCCAGGGACCAGGGTTTCCATTCACATGGAAGGAAGGACCCCACAA--------GGCAGGTGCCTTGTCTGGCGGGTGGAGCAGGGGAGGGAAATCC---CCAC-------------AGGAGCC--------AAGCCTC----AGTGGGCTGGGCTTTCATTTCCTTTGTTGTGTAGTCTAAAGTAGGA--ACCATTGG i chlSab2.chr20 I 6 C 0 s calJac3.chr7 64631641 679 + 155834243 gtagagtaaggatagtcataggacccactttacagagctccact--------gaggacca---agagagtgcct-gaaggagcccagctcagcacccagcccacaggaagggctcCGTGATCATGAGTGATGATCCA--TGTT-GATTCAT---GATCACGTAAATTCTTCTTCCTGG-----------------------GTGCACGTGAA--------------------------------------------------------------------AGGTGG-CACACTGGGCTGGTTTATGCACTTCAT-GAGAGTTGCACTTATGGCCACATGG-GAGACTTTCCTGTCACGTCCCAGG-TGCTCTTCCTTCCTCCTTTGTGGCTGAGGCAGTGAGGGCTTGGTGCCTGGCTGGGAGGGAGGGA-AAGAAGGTGGAGAGCCAGCTGCTCCACCAGGGCCGGGAAATGTGGACTTTATGGGAAGCTGGCAGCCTGCTTTGCTGGAACTGAAGGCAATTTGCAGCAACACAAAAGTGTGCATT--------AGGGAGGGAGGGCCGGGAGCCCCAGCAAT-GGGAGGCTGGAGTCTGGAAAAGAAGGGGTTGAAACTGTCCCTGGGAAGAGCAATTT-AACTGCAACCAAAGCACAAACACATGTGCCAGGGA-TGGGGTTTTTATTCAAATGGAGTGAACAT-C----------------------CCTTGCCTGGCTGATGGAACAGGGGAAGGAAATCC---CCAC-------------AGAGGCC-----------------------GGCTGGGTTTTCATTTCATTTGTTTCGTGGTCTGAAGTAGGA--ACCACTGG i calJac3.chr7 I 436 C 0 s mm10.chr4 25427423 725 - 156508116 GCAGTGGGGGGATTGCAGTGAGAACTACTCCATC-AGTTCCCCT--------GAGGTCTA--TTGAG-----CT-GAATG--CTCAGTTCTGC--CCAGCCCACAGGAAGGGCTCAGTGACCAC-----ATGCTCCAATTGGG-TTATCACAATGAGCATATGG---CTCCTTTCCAG-----------------------GTGAGCATGGAGACCTTTCTGGACAGcacacacacacacacacacacacacacacacacacacacacacacacacacacaGAAGGGCCTCCCTGGCTGGCTTGTGCCCT-------GTGCTGAATCTACAGCCACAGGGAGGGACCTTTCTGTCACACTCAAGG-TGC-CTTCCCATCTCCTTTGTATCTCA-ACAAT--GGCCTCTGTGCCTGGCTGTGAAGAAAGGATCAGCCTGTGACAAGCCTG----TCCTCCAGGCCTGAGGATCT--GACTTTATGCAGAGCCCCAGAGCTACTTCACTGGAACTGAAAGCAATTTGCAGCCTCACAAAAGGATGCATT--------AGGGAGAGAG----------CTCAGCGGT-GGGCAGCTGGAGGCTGGGGAGAGAAGAGATG-AACTGGCCTGGGGAGGAACAATTT-GAAGAAAGCCAAAG---------------CAGGGGTTGGG--TTCCATTCCTGTG----GCAGGA-CTCAGGATGGGGGGTGGTGGGTGCCTGGCCCTGCTGATG----AGGGGGAACAGATTTGGACCTC-------------AGGTGCCTTCCAGGGTAGACTC----TG-GGTTCGGATTTTCATTTCCCACACT-----GTCTGAAGTAGGA--ATAATCAG i mm10.chr4 C 0 C 0 s canFam3.chr2 15004347 650 - 85426708 gaggaatgggaacaataatagcgccccctttatag-gtttgggg--------gaggacttgacagatggtgcctagaaagagcccagctcagcacccggcccccaggaagggcgccctgatcgtgagctaccatCAG--TGTCGATACCATGAGGATCCCACGG---CTCCTTCCTGGTGAATGGGCGGGTGTGTTTATCCGTGAACGCCGA--------------------------------------------------------------------GAGTGGGCTCACTGTGCTGGTTCAT---CATCACGGTG----GCTTCTCTGGCCTCTGGGAGAGACCCTCCTGTCACATCCAGGG-CACCGTCCCACCTCCCTCTGTGGCCCAGACGATGAGGACACGATGTCTGGTCAGGAGGGAGGGA-AAGAAGGTGGAAAGC----TGTCCCTCCGGGACCAGAGA--CTGGACTTTTTGCAAAGCCGG-GACCTACTTTGCAGGAAGTGAAAACAGTTTGCGGCAACACAAAGGAG-GCATTGGGAGGAGAGAGCAGGAGGCCCAGGAGGCCCAGCAGT-----GACCGGGGAC--------------------------------------------------------------------CTGCCAGGGACCGGG-CTGCTGTTCTCATGGAATGAAGAA-TCT-----------------------------GCTGGTGGGG--AGGGAGGCGAATCC---CCACCGTCCTGAGACTTCGTGGCT--------GGGCCTTCCAGGGTGGACTCTGGTGTCATTTCGTC--GTGTGCAGTCTGCAGTGAGAGGAACGCTGG i canFam3.chr2 C 0 C 0 a score=886850.000000 s hg38.chr1_KI270760v1_alt 62536 440 + 109528 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGGGGTGCAGATTGGTG-TGAAGACTCTTGGGGTTGAGGATGGAGTGGAGAGGGCAGATCT----------------GAGTCACAGTCAATGA-----------------CAGG----------AGGGCTCTAG----TGGGAAG-------------------GAGGGAGAGGGCAGAGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GTCTC------------------------TAGTGGGAAG---------------GAGGGGGGA-TTGGCAGC-------TCCAAAGCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTTGTGAGCTCCCTGAACTTCCAGCGG---------------CCCAGGCCGTCCTGGATTACAGAAATGTAGTGGAACCCCTCATCCAGGG--CTCAGGTGCTCCCAGAGAATTGAGGCTAGGAATGGCCCTTGAGTTAACCC-ACCATA-TAACCTTATAGTCAGA------GAGGTCTGGGGCAGCAAGGGAAGAGGGGCTgggggagttac-tgtccaagat s panTro4.chr1 30499101 441 + 228333871 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGGGGTGCGGATTGGTG-TGAAGACTCTTGGGGTTGAGGATGGAGTGGAGAGGGCAGATCT----------------GAGTCACAGTCAATGA-----------------CAGG----------AGGGCTCTAG----TGGGAAG-------------------GAGGGAGAGGGCAGAGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GTCTC------------------------TAGTGGGAAG---------------GAGGGGGGAATTGGCAGC-------TCCAAAGCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTTGTGAGCTCCCTGAACTTCCAGGGG---------------CCCAGGCCGTCCTGGATTGCAGAAATGTAGTGGAACCCCTCATCCAGGG--CTCAGGGGCTCCAAGAGAATTGAGGCTAGGAACGGCCCTTGAGTTAACCC-ACCATA-TAACCTTATAGTCAGA------GAGGTCTGGGGCAGCATGGGAAGGGGGACTGGGGGAGTTAC-AGTCCAAGAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30087423 386 - 229942017 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGGGGTGCAGATTGGTG-TGAAGACTCTTGGGGTTCAGGATGGAGTGGAGAGGGCAGATCT----------------GAGTCACGGTCAATGA-----------------CAGG----------AGGG--------------------------------------------------------------------------------------------------------------------CTC------------------------TAGTGGGAAG---------------GAGGGGGGAATTGGCAGC-------TCCAAAGCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGAGCTCTCTTGTGAGCCCCCTGAACTCCCAGGGG---------------CCCAGGCCATCCTGGATTGCAGAAATGTAGTGGAACGCCTCATACAGGG--CTCAGGGGCTCCAAGAGAATTGAGGCTAGGAACAGCCCTTGAGTTAACCC-ACCATA-TAACCTTATAGTCAGA------GAGGTCTGGGGCAGCAAGGGAAGAGGGGCTGGGGGAGTTAC-TGTCCAAGAT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33383180 440 + 229590362 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGAGGCGCGGATTGGTG-TGAAGACTCTTGGGGTTCAGGATGGAGTGGAGAGGGCAGAGCT----------------GAGTCACGGTCAATGA-----------------CAGG----------AGAGCTTTAG----TGGGAAG-------------------GAGGGAGAGGGCAGGGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GGTTG------------------------TAGTGGGAAA---------------GTGGGGGGAATTGGCAGC-------TCCAAGTCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTCCTGAGCTCCCTGAACTCCCAGGGG---------------CCCAGGCCATCCTGGATTGCAGAAATGTAGTAGAACCCTTCATCCAGGT--CTCAGGGACTCCAAGAGAATTGAGGCTAGGAACAGCCCTTGAGTTAATCC-ACCATAGTGAC--TATAGTCAGA------GAGGTCTGGGGCAGCAAGGGAAGAGGGGCTGGGGGAGTTAC-TGTACAAGCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29894432 440 - 227556264 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGAGGCGCGGATTGGTG-TGAAGACTCTTGGGGTTCAGGATGGAGTGGAGAGGGCAGAGCT----------------GAGTCACGGTCAATGA-----------------CAGG----------AGAGCTTTAG----TGGGAAG-------------------GAGGGAGAGGGCAGGGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GGTTG------------------------TAGTGGGAAA---------------GTGGGGGGAATTGGCAGC-------TCCAAGTCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGACTCTCTCCTGAGCTCCCTGAACTCCCAGGGG---------------CCCAGGCCATCCTGGATTGCAGAAATGTAGTAGAACCCTTCATCCAGGT--CTCAGGGACTCCAAGAGAATTGAGGCTAGGAACAGCCCTTGAGTTAATCC-ACCATAGTGAC--TATAGTCAGA------GAGGTCTGGGGCAGCAAGGGAAGAGGGGCTGGGGGAGTTAC-TGTACAAGCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32657813 439 + 220367699 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGGGGCGCAGATTGGTG-TGAAGACTCTTGGGGTTCAGGATGGAGTGGAGAGGGCAGAGCT----------------GAGTCACGGTCAATGA-----------------CAGG----------AGAGCTTtag----tgggaag-------------------gagggagagggtagGGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GGTTG------------------------TAGTGGGAAA---------------GTGGGGGGAATTGGCAGC-------TCCAAGTCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTCCTGAGCTCCCTGAACTCCCAGGGG---------------CCCAGGCCATCCTGGATTGCAGAAATGTAGTAGAACCCTTCATCCAGGT--CTCAGGGACTCCAAGAGAATTGAGGCTAGGAACAGCTCTTGAGTTAATCC-ACCATAGTGAC--TATAGTCAGA------GAGGTCTGGGGCAGCaagggaagaggggctgggggagTTAC-TGTACAA-CT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28174128 440 - 130588469 ACCTTCTTGTAAT--GCCTTGTGCTTGGAGCTGGGGTGCAGATTGGTG-TGAAGACTCTTGGGGTTGAGAATGGAGTGGAGAGGGCAGAGCT----------------GAGTCACGGTCAATGA-----------------CAGG----------AGAGCTCTAG----TGGGAAG-------------------GAGGGAGAGGGCAGGGCT--------------GAGTCACAG-----------TCAA------TGACAGGAG-------GGCTG------------------------TAGTGGGAAA---------------GGGGGGGGAATTGGCAGC-------TCCAAGTCATGGTAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTCGTGAGCTCCCTGAACTCCCAGGGG---------------CCCAGGCTGTCCTGGATTGCGGAAATGTAGTAGAACCCTTCATCCAGGT--CTCAGGGACTCCAAGATAATTGAGGCTAGGAACAGCCCTTGAGTTAACCC-ACCATAGTGAC--TATAGTCAGA------GAGGTCTGGGGCAGCAAGGGAAGAGGGGCTGGGGGAGTTAC-TGTACAAGTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64632320 368 + 155834243 ACCTTCCCGTAAT--GCCTTGTGCTTGGAGCTGGGGTGAGAATTGGTG-TGAAGACTCTTGAGGCTGAGGATGGAATGGAGAGGGCAGAGCT----------------GAGTCACAGTCAATGG-----------------CAGG----------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGAGAAGCAGCAGC-------TGCAAGCCGGGGGAGCCTGG----ACCTCAGGCCTCTCTCGGGCTCTCTCGTGGACT-CCTGAATTCCCAGAAG---------------CCCAGGCCATCCTGGATTATGGAAATGCAGTGGAACCCCTCAGCCAGTG--CTCCGGGGCTGGAAGAGAA-------TAGGAAGGCCCCTCAAGTTAACACGGCCATC-TAACCTTATAGTCAGAGACACTGAGGTCTGGGGCAGCAAGGGAGGAAGGGCTgggggagttacttgtccaagct i calJac3.chr7 C 0 C 0 s mm10.chr4 25428148 468 - 156508116 ATCGTCCTGATATTGGTCCTGCG---GAAGCTGGGCTGACAGCTGGTGCTGCAG----CTGGGGTGTGGGACAGAGTGAGGAGGACAGAACTTAGGGTGGGTGGCAGAGAGCCACTGTAGCTGGGTCAGCCAGGTGGGGCTCAGGTCACCACTACAGAGACCTAG----AGGACAT-------------------ACGGCAAGCTCCAAGGCT-----------ACAAAGCTTTAG-----------AGAAAAGACTTGGAACAAG-------ATTCT------------------------GCATAGGAAGCATACTGCCTCCATTGGGATGGGAGATGG--GC-------TACATGGTATGCT------------------GCCTCCATTGGGAT-------------CCTAAGCTCCTAGGAGCCTCTGATTGCCTCACCCTGATCATCCTAGACTGTGAAAATGAAATGGAACACCTAGTCAAAAG---TGAGGGACTCAGGGAGAATTGGGGCCACCAA-GGCTCCAGAAAtagccc-agccccataacctcacagcagga---------------------------tggaggtttatgggaagttc-tgtccaaatt i mm10.chr4 C 0 C 0 s canFam3.chr2 15004997 502 - 85426708 GTCTTCCTCTGAT--GCCT--------GTGCTGGGGC-----CTGGTG-TAGGGGCCCCTGGGGTCTAAGATGGGGTGGAGAGAG-AGAACT----------------GAGTCACAGCCTGTGC-----------------CAGG----------AGGGCCGTTGGAGCTGGGAAGGCAGACCAGGCTCAAGTTCGGGGGAGAACCCAAGGCCGGGAGCCCAAGATCATGTCACAGATTCTGCAGCTTCAA------GGAGAAGAGTCGGTGAGGCTGAGGGTACAGGACACGGAGATGGGTCAGGGGTAAG------------ACTGTGAAGGGGGTGGGCAGTGATGTCACCCTGGGGCTGGCAGCCAAGAGGCATCTCCCCCCTCTCTGGGGCAGAGTCACGGGCTCCCTGACCTCAC-GGGG---------------CCCAGGCCACCCTGGATC-------TGTAACAGAACCTTTTGTCAAGGGGGCtcaggggcccacagaggattggggctcagaggctcctgtgaag-aaccc-agccccgcaacctcatgggcagagatactgaggtctagacc------------gggacttggcctgttgc-agct------ i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 539950 934 - 28733288 I a score=616493.000000 s hg38.chr1_KI270760v1_alt 62976 214 + 109528 cacacagtaagtcaaggcctaagctggacacaaccccaggCAGCCCACAAAGAATAAAT-AACTCTTTCTCTCCCATCACCTCTGTCCCCTGACCAGGGCATCATGCCTCTGGACAACATGGTACCCCAGGTCCAACTCTT---A------AGCTGTGTGTGGCCACTGCAGTGGAG----TGCGCTGTCTCTGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG s panTro4.chr1 30499542 214 + 228333871 CACACAGTAAGACAGGGCCTAAGCTGGACACAACCCCAGGCAGCCCGCAAAGAATAAAT-AACTCTTTCTCTCCCATCACCTCTGTCCCCTGACCAGGGCATCACGCCTCTGGACAACATGGTACCCCAGGTCCAACTCTT---A------AGCTGTGTGTGGCCACTGCAGTGGAG----TGCGCTGTCTCCGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30087809 214 - 229942017 CACACAGTAAGTCAGGGCCTAAGCTGGACACAACACCAGGCAGCCCACAAAGAATAAAT-AACTCTTTCTCTCCCATCACCTCTGTCCCCTGACCAGGGCATCACGCCTCTGGACAACATGGTACCCCAGGTCCAACTCTT---A------AGCTGTGTGTGGCCACTGCAATGGAG----TGTGCTGTCTCCGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i ponAbe2.chr1 C 0 I 940 s nomLeu3.chr24 540884 215 - 28733288 CACATAGCAAGTCAGGGACTAAGCTGGACAC-ACCCCAAGCAGCCCAGGAAGAATAAAG-GACTCATTCCCTCCCACCACTTCTGTCCCCTGAACAGGCCATCGTGCCTCTGGGTAACATGATAGCCCAGGTCCAACTCTTAAGA------AGCTGTGTGTGGCCACTGCAGCCAAG----T--GCTGTCTCCGGGAGGCACCTCTTAAA-GC---TCACACTGCCAGGAGGG i nomLeu3.chr24 I 934 C 0 s rheMac3.chr1 33383620 213 + 229590362 CACACAGTAAGTCAGGGCCTAAGCTGGACACAACCCCAGGCAG-CCATAAAGAATAAAT-AACTCTTTCTCTCCCACCACCTCTGTCCCCTGACCAGGCCGTCATGCCTCTGGACAACATGGTGGCCCAGGTCCAACTCTT---A------AGCTGTATGTGGCCACTGCAGCCGAG----TGTATTATCTCCGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29894872 213 - 227556264 CACACAGTAAGTCAGGGCCTAAGCTGGACACAACCCCAGGCAG-CCACAAAGAATAAAT-AACTCTTTCTCTCCCACCACCTCTGTCCCCTGACCAGGCCGTCATGCCTCTGGACAACATGGTAGCCCAGGTCCAACTCTT---A------AGCTGTATGTGGCCACTGCAGCCAAG----TGTATTATCTCCAGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32658252 213 + 220367699 CACACAGTAAGTCAGGGCCTAAGCTGGACACAACCCCAGGCAG-CCACAAAGAATAAAT-AACTCTTTCTCTCCCACCACCTCTGTCCCCTGACCAGGCCGTCATGCCTCCGGAAAACATGGTAGCCCAGGTCCAACTCTT---A------AGCTGTATGTGGCCACTGCAGCCGAG----TGTAGTATCTCCGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28174568 209 - 130588469 TACACAGTAAGTCAGGGCCTAAGCTGGACACAACCCCAGGCAG-CCGCAAAGAATAAAT-GAC----TCTCTCCCACCACCTCTGTCCCCTGACCAGGCCATCGTGCCTCTGGACAACATGGTAGCCCAGGTCCAACTCTT---A------AGCTGTATGTGGCCACTGCAGCCGAG----TGTACTACCTCCGGGA-GCACCTGTTAAA-GC---TCACACTGCCTGGAAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64632688 215 + 155834243 cacgcagtaagtcagggtctaagctgggcacaaccccagacagccCACAAAGAACAAATAAACTCTTTCCCTTCCACCACCTCTGTCCCCTGACCAGGGCATCACACCTCTGGACTACATTGTAGCCCAGGTCCAACTCTG---A------AGCTGTGTGTGGCCACTGCAGCCGAG----TGCGCTGTCTCCGGAA-GCACCAGTTAAA-GC---CCAAGCTGCCTGGAAGG i calJac3.chr7 C 0 C 0 s mm10.chr4 25428616 198 - 156508116 cacacagccaggcaggaactaagctggtta-agtgtcaggtatctct------gtctaa-aactctgtctctc-------------------ACCAGGGCAACACACTTCTGAACATCACGG---CCCAGGTCCAGCCACC---AGGTCCCAGTCCTGAAAGACATCAGTGACAGAGCATCTGCCCCCTGCCCGGGA-ATTCTCACCATG-TCTTTTTCTCCTCCCTGGTAGG i mm10.chr4 C 0 I 8 s canFam3.chr2 15005499 175 - 85426708 cacccagcaagtcaggggcTG---CGGGAGCAACCTCTGGCGG-CCTC----------T-GACCCCGTCTC----------------CCTGGGTCAG----------CCCCTGACACCATCAGAGCTCGGGTCACCCACCG---AG-----GGCAGTGTTGGGCC-CTCCCTCGGGG----TGCACCTTCTCAGGAG-ACCGCTGCTAAAGGC---TCGGGGCTCCCCGAGGG i canFam3.chr2 C 0 C 0 a score=1928141.000000 s hg38.chr1_KI270760v1_alt 63190 654 + 109528 AGTGAACCAGCCTCTCTCC-----CATCAGCCCAGCAGCAGGGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GTAATGGTGGGTGAGCC-CAGCAAGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-GGCTGGACAGCAGCACCAGGGTGAGGGGTGGGTGGGAGCCTGAGTGCTGGC-AGGCACAGGAAGGAGAGAGGGGCAGGGTGCTCGGGAAATGCTGTGTCCCAGGGGCCA--CTC-TGCAGGGAAGAGCCCCTGGGTGTCGCGTGAGTGGAGGGAATTGGACCCTCCTCCAAGCACAGGATTCCAtggccctgggcggccagtgacctcactgctctgagcc--aggggtggggataagaatgccccctc--ccaggactgcagtaggga-gtgagataacctttaccaggtaacatgctcagcccagcgcctgata------------------gacggGCTC-CCTC---CCCA-GTCCCC---AGTcaggacaccccaggggtcaggactgtgggctccacagtcccacatctgggattggtgtcccgcttcactgcctgctggatgtgtgaccccgggcaggttcctccccctcccttagcctcaatttcctctttcatgaaatgAT----------GCATTGCCCTCCAACTCTTGGT----------------TATTCTTTGTGAAGTGTCTAACACC------GGCACAGAAG s panTro4.chr1 30499756 620 + 228333871 GGTGAACCAGCCTCTCTCC-----CATCAGCCCAGCAGCAGAGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GTAATGGTGGGTGAGCC-CAGCAAGGGGCCTGGAAGCAG------------------------------CACCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGGC-AGGCACAGGAAGGAGAGAGGGGCAGGGTGCTCTGGAAATGCTGTGTCTCAGGGGCCA--CTC-TGCAGGGAAGAGCCCCTGGGTGTGGCGTGAGTGGAGGGAATTGGACCCTCCTCCAAGCACAGGGTTCCAtggccccgggcagccagtgacctcactgctctgagcc--aggggtggggataagaatgccccctc--ccaggactgcagtaggga-gtgagataacctttaccaggtaacatgctcagcccagcacctgata------------------gacggGCTC-CCTC---CCCA-ATCCCC---AGTCAGGACACCCcaggggtcagggctgtgggctccacagtcccacatctgggactcgtgtcccgcttcactgcctgctggatgtgtgacccggggcaggttcctccccttcccttagcctcaatttcctctttcatgaaatgAT----------GCATCGCCCTCCAACTCTTGGT----------------TATTCTTTGT-AAGTGTCTGACACA------GGCACAGAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30088963 651 - 229942017 aGTGAACTAGCCTCTCTCC-----CATCAGCCCGGCAGCAGGGACTCC-TCTCAGACC-GGCAGAGATGCTGCA-GTAATGGTAGGTGAGCC-CAGCAAGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-GGCTGGACAGCAGCCCCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGGC-ACGCACAGGAAGGAGAGAGGGGCAGGGTGCTCGGGAAACGCTGTGTCCCGGGGGCCACTCTC-TGCAGGGAAGAGCCCCTGGGTGTGGAGTGAGTGGAAGGAATAGGACCCTCCTCCAAGCACAGGGTTCCATAGCCCTGGGCGGCCAGTGACCTCACTGCTCTGAGCC--AGGGatggggataagaatgccccctc--ccaggactgcagtaggga-gtgagagaacctttaccaggtaacatgctcagcccagcacctgata------------------gacggGCTC-CCTC---CCCA-ATCCCC---GGTcaggacaccccagtggtcaggactgtgggctccacagtcccacatctgggactcgtgtcccgcttcactgcctgctggatgtgtgatccggggcaggttcctccccttcccttagcctcaatttcctctttcatgaaatgAT----------GCAACGCCCTCCAAGTCTTGGT----------------TATTCTTTGTGAAGTGTCTGACACA------GGCACGGAAG i ponAbe2.chr1 I 940 C 0 s nomLeu3.chr24 541099 682 - 28733288 -GTGAGCTGGCCCCTCTCC-----CACCAGCCCAGCAGCAGGGACTCC-TCTCAGACCAGGCAGAGATGCTATA-GTGATGGTGGGTGAGCC-CAGCGGGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-GGCTGGACAGCAGCCCCAGTGTGAGGGGTGGG----AGCCTGAGTGCTGGC-GGGCACAGGAAGGAGAGAGGGGCAGGGTGCTCGGGAAACGCTCTGTCCCAGGGGCCACCCTC-TGCAGGGAAGAGCCCCTGGGTGTGGAGTGAATGGAGGGAATTGGACCCTCCTCCAAGCACAGGGCTCCGTGGCCCCCGGCGGCCAGTGACCTCACAGCTCTGAGCC--AGGGatggagataagaatgtcccctc--caaggattgcagtgggga-gtgagataagctttaccaggtaacatgctcagcccagtgcctgata------------------gacggGATCTCCTC---CCCA-ACCCCC---AGTcaggacaccccaggggtcaggattgtgggctccccagtcacacatctgggacccgtgtcctgcttcactgcct-ctggccgtgtgacccagggcaggttcccctctttccctgagcctcagtttcttcttctgcaaaatggggatcataatagcacctccctctgagttatggtgaggacac-tgggagacaatcctcataaagtgccttgcacaggacctggcacaGAAA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33383833 651 + 229590362 GGTGAACCAGCCTCTCTCC-----CATCAGCCCAGCCGCATGGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GCAATGGTGGGTGAGCT-CAGCAGGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-CACTGGACAGCAGCACCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGAC-AGGCACAGGAGGGAGAGAGGGGCAGGGTGCTCTGGAAACGCTGTGTCCCAGGGGCCACTCTC-TGCAGGGAAGAGCCCCTGGGTGTGGAGTGAGTGGAGGGAATTGGACCCTCCTCCAAGCACAGGGCTCCATGGCCCCAGGCGGCCAGTGACCTCACTGCTCTGAGCC--AGGGatggggatatgaatgcctcctc--ccaggactgcagtgggga-gtgacataacctttaacaggtaacatgctcagcccagcgcctgatg------------------gacagGCTC-CCT----CCCA-GCCCCT---GGTcaggacaccccaggggtcaggattgtgggctccacagtcccacatctgggacttgcgtcccgcttcactgcctgctggatgtgtgacccggggcaggttcctccccttcccttagcctcagttttctcttctatgaaatgAT----------GCACCTCCCTCCGAGTCTTGGT----------------TATTCCTTGTGAAGTGTCTGACACA------GGCACAAAAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29895085 651 - 227556264 GGTGAACCAGCCTCTCTCC-----CATCAGCCCAGCCGCATGGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GCAACGGTGGGTGAGCT-CAGCAGGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-TGCTGGACAGCAGCACCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGAC-AGGCACAGGAGGGAGAGAGGGGCGGGGTGCTCCGGAAACGCTGTGTCCCAGGGGCCACTCTC-TGCAGGGAAGAGCCCCTGGGTGTGGAGTGAGTGGAGGGAATTGGACCCTCCTCCAAGCACAGGGCTCCATGGCCCCAGGTGGCCAGTGACCTCACTGCTCTGAGCC--AGGGatggggatatgaatgcctcctc--ccaggactgcagtgggga-gtgacataacctttaacaggtaacatgctcagcccagcgcctgatg------------------gacagGCTC-CCT----CCCA-GCCCCT---GGTcaggacaccccaggggtcaggattgtgggctccacagtcccacatctgggacttgcgtcccgcttcactgcctgctggatgtgtgacccggggcaggttcctccccttcccttagcctcagttttctcttctatgaaatgAT----------GCACCTCCCTCCGAGTCTTGGT----------------TATTCCTTGTGAAGTGTCTGACACA------GGCACAAAAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32658465 651 + 220367699 GGTGAACCAGCCTCTCTCC-----CATCAGCCCAGCCGCATGGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GCAATGGTGGGTGAGCT-CAGCAGGGGGCCTGGAAGCAGAGCAAGCCCAGGAGGG-CGCTGGACAGCAGCACCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGAC-AGGcacaggagggagagaggggcgGGGTGCTCCGGAAACGCTGTGTCCCAGGGGCCACTCTC-TGCAGGGAAGAGCCCCTGGGTGTAGAGTGAGTGGAGGGAATTGGACCCTCCTCCAAGCACAGGGCTCCATGGCCCCAGGCGGCCAGTGACCTCACTGCTCTGAACC--AGGGATGGGGATATGAATGCCTCCTC--CCAGGACTGCAGTGGGGA-GTGACATAACCTTTAACAGGTAACATGCTCAGCCCAGCGCCTGATG------------------GACAGgctc-cct----ccca-gcccct---ggtcaGGACACCCCAGGGGTCAGGATTGTGGGCTCCACAGTCCCACATCTGGGACTCGTGTCCCGCTTCACTGCTTGCTGGATGTGTGACCCGGGGCAGGTTCCTCCCCTTCcgttagcctcagtttcctcttctatgaaATGAT----------GCACCTCCCACTGAGTCTCGGT----------------TATTCCTTGTCAAGTGTCTGACACA------GGCACAAAAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28174777 650 - 130588469 GGTGAACCAGCCTCTCTGC-----CATCGGCCCAGCTGCAGGGACTCC-TCTCAGACCAGGCAGAGATGCTGCA-GTAATGGTGGG-GAGCC-CAGCAGGGGGCCTGGAAGTGGAGTGAGCCCAGGAGGG-CGCTGGACAGCAGCACCAGGGTGAGGGGTGGG----AGCCTGAGTGCTGAC-AGGCACAGGAGGGAGAGAGGGGCGGGGTGCTCTGAAAGCGCTGTGTCCCAGGGGCCACTCTC-TGCAGGGAAGCGTCCCTGGGTGTGGAGTGAGCGGAGGGAATTGGACCCTCCTCCAAGCACAGGGCTCCATGGCCCCAGGCGGCCAGTGACCTCACTGCTCTGAGCC--AGGGatggggatatgaatgcctcctc--ccaggactgcagtgggga-gtgagataacctttaacaggtaacatgctcagcccagtgcctgatg------------------gacagGCTC-CCT----CCCA-GCCCCT---GGTcaggacaccccaggggtcaggattgtgggctccacagtcccacatctgggactcatgtcccgcttcactgcctgctggatgtgtgacccgggacaggttcctccctttcccttagcctcagtttcctcttctatgaaatgAT----------ACACCTCCCTCCAATTCTCGGT----------------TATTCCTTGTGAAGTGTCTGACACA------GGCACAAAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64632903 657 + 155834243 ACTGAGTAGGCCCCTGTCC-----CATCAGCTGAGCAGCAGGGACCCC-TCTCAGATCAGACAGAGACACTGCA-GTGGCAGAGGGTGAGCC-CAACAGGGGGTCTGGAAGCAGAGCAAGCCCAGGAGGG-GGCTGGGCAGCAACACCAGGGTGAGGCGCAGG----AGCCTGAGCGCTGGC-TGGCACAGGAGGAAGAGAGGGTCAGAGTGGCTGGGAGATGCTCTGTCCCaggggccactctc-tgcagggaagagcccct-ggtgtggagcgaatggagggaattggaccctgctccatgcataccactttatggctgcaggcggccagtgacctcgctgctctgagcc--agggatggggataagaatgccgcctc--ccaggactgcagtgggca-gtgagataaccttaaccaggtaacatgcttagcccagcgcctgatc------------------gacagGCTC-CCTC---CCCA-ACCCCC---AGCCAGGACACCCCAAGGATCAGGATTGTGGGCTCCCCAGTCCcacatctgggaattgtgtcctgcttcactgcct-ctgcctgtgtggcccagggcaagtccctctccttccctgagcttcagtt---tcttctacgaaatgaggatcacaatagcacctcCCGCCGAGTCTTGGC----------------TATTCCCTGTGATATGTCCGACACA------GGCACAGAAG i calJac3.chr7 C 0 C 0 s mm10.chr4 25428822 525 - 156508116 AGTGCATCAGCCCTTTATC-----CATCAACACAGTGGCAGGGACGCCATCTCTGAATGGACAAAGATACCTCACGGAGAGATGGGCCAGCT-CAGCAGGCAGCTGGGAAGCAGTGATGGCTT----------CCAGGCAGTAGCATCAGGGTGAGGGGTTGT----TCCCTAGGGCTGGGC-AGGGCCAGAAGGA-------GGCAGAG----CTAGTGGTGCCACGCCCCAGAGACTGTTCTC--------------CCCTGGTTGAGAAG-----------------------CCTTGTACACAGAAGTC--TTGCC-----TGGCCAACTTCCTCA-TCCTCTGAAACTTAGGGTTGAG--TAAGAAGGCTGCCTC--TCAGAACTACAGTGGGGATGCCAAAGAGCCAGAAATACAGAACATGTCCAATGTAG-------------------------------GGCTC-TTTC---CTCA-GTCTTCCTAAACCGGGACAACTCAGCCATCAGAGGTCTGATCT-------------------------------------------ctagcaatgtgacct-gagcaagtccctccctttgactgcacctcagtttccctgtctgcgaaatgga----------g----TCCCACCAA------GG----------------ACTTCCTTGTGCAGT-TCCCACACA------GG-ACAGAGG i mm10.chr4 I 8 I 175 s canFam3.chr2 15005674 638 - 85426708 CACGGGGTGGCCCCTCTCCATCGGCCCCAGCCCCAGGGTGGGGGTCCC-T---------------GACCCTGC--GAGAGGGTGGTGGAGCCGCAGCA-----CTGTGAGGCCCAGCAAGGCCGGGAGGGAGGCTGGGCAGCAGCTC------GGGGAGGGGG----TGCCCGAGGGCGGGCGGGGCACCCGAGGG------GGGCAG-GTGCCTGCTGGACGCCG---CCCCGGGACCGCTCTTGTGCGGGGCGGGGCTC--AGGTGTGGAGGGAGCTGCGGGGTT--GCCCCCACTCTGCGCCC--TTCTCCGCGACCTGGGGCGG----TTGCCTCGCTGCTCTGGACC----------CCATAAGGACGCCCCCCCCACCAGGGCCGCCGCAGGGA-GGGACACGCCCT--GGTAGGGGCCCTG--CAGCCCAGAGCCTGGCGCGGGAGGGTCCCAGACCTGGGGGGCTC-CCTCCTGCCCACGCCCCG---GGCCCAGACACCCCA---CCCAGGAGCTTG--CTCCACAGGCACCC---------TGGTGTCCTGCGCCACCGCCC-CTGGGGACGGGAGCCTGCACAG---CCCCTCccttccccggcctcagtgtcctcatctgcagaatggggatgataacagcgcctccctgcaggtggcggtgaggactcgtgaga--taatcctcgcagagtgcctggcacagagcccggcacaGATG i canFam3.chr2 C 0 C 0 a score=170253.000000 s hg38.chr1_KI270760v1_alt 63844 59 + 109528 ACTCACC-TGATCAAAGGCAGCAGGCATCAC-CCTGAGCT-GGGGGTCTAGAGTGACCTTTT s panTro4.chr1 30500376 59 + 228333871 ACTCACC-TGATCAAAGGCAGCAGGCATCAC-CCTGAGCT-GGGGGTCTAGAGTGACCTTTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30089614 59 - 229942017 ACTCACC-CGATCAAAGGCAGCAGGCATCAC-CCTGAGCT-GGGGGTCTAGAGTGACCTTTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 541781 60 - 28733288 ACTGCCT-CCACCAAAGGCAGTAGGTGTCAC-CCCAAGCCGGGGGGTCTGAAGGGGACTTTC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33384484 59 + 229590362 ACTCACC-TGATCAAAGGCAGCAGGCGTCAC-CCTGAGCT-GGGAGTCTGGAGGGGCCTTTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29895736 59 - 227556264 ACTCACC-TGATCAAAGGCAGCAGGCGTCAC-CCTGAGCT-GGGAGTCTGGAGGGGCCTTTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659116 59 + 220367699 ACTCACC-TGATCAAAGGCAGCAGGCGTCAC-CCTGAGCT-GGGAGTCTGGAGGGGCCTTTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175427 59 - 130588469 ACTCACC-TGATCAAAGGCAGCAGGCATCAC-CCTGAGCT-GGGGGTCGGCAGGGGCCTTTG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64633560 59 + 155834243 ACTCACC-TGCTCAGAGGCAGCTGGCGCCAG-CCCAAGCT-GGGGATCTGGAGGGAACTTTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15006312 62 - 85426708 ACACAAAGGGATCGAAGGTAGCGGGTGTCACTCCTGAGCTGGGGGGTCCACAGGGGCCTTTT i canFam3.chr2 C 0 I 1590 e mm10.chr4 25429347 175 - 156508116 I a score=227491.000000 s hg38.chr1_KI270760v1_alt 63903 78 + 109528 AGACAGTGAAG-TCTGGACCCAT-GGAGGGGTTATCA---TTTCCACAGCTCTCATTCGCTCTGCCTGTCCCTTCCAGAATCC s panTro4.chr1 30500435 78 + 228333871 AGACAGTGAAG-TCTGGACCCAT-GGAGGGGTTATCA---TTTCCACAGCTCTCATTCGCTCTGCCTGTCGCTTCCAGAATCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30089673 78 - 229942017 AGAGAGTGAAG-TCTGGACCCAT-GGAGGGGTTATCA---CTTCCACAGCTCTCATTCGCTCTGCCTGTCCCTTCCAGAATCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 541841 77 - 28733288 AGACAGTGACT-TCTGGACCCACAGAAGGGGTTGTTA---TTCCCACAG--CTCATTTGCTCTGGCTGCCCCTTCCAGGATTC i nomLeu3.chr24 C 0 I 3 s rheMac3.chr1 33384543 81 + 229590362 AGACAGTGAAG-TCTGGACCCGT-GGAGGGGTTGTCATCGTTCCCGCAGTTCTCATTTGCTCTGTCTGTCCCTTCCAGAATCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29895795 81 - 227556264 AGACAGTGAAG-TCTGGACCCAT-GGAGGGGTTGTCATCGTTCCCGCAGTTCTCATTTGCTCTGCCTGTCCCTTCCAGAATCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659175 81 + 220367699 AGACAGTGAAG-TCTGCACCCGT-GGAGGGGTTTTCATCGTTCCCACAGTTCTCATTTGCTCTGCCTGTCCCTTCCAGAATCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175486 81 - 130588469 AAACAGTGAAG-TCTGGACTCAT-GGAGGAGTTGTCATCGTTCCCACAGCTCTCGTTCGCTCTGCCTGTCCCTTCCAGAATCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64633619 82 + 155834243 AGACAGTGAAG-TCTGGACTCATAGGAAGGGCGGTCATCATTCCCACCACTCTCATTCACTCCGCATGTCCCTTCCAGAGTCC i calJac3.chr7 C 0 C 0 s canFam3.chr2 15007964 79 - 85426708 AGACAGTGGAGCCCTAGACTTAC-AAGAGGGTTGTTA---TTCCTGCAACTATCACTCATTCCAGGTATCTTTTCCAGAATCC i canFam3.chr2 I 1590 C 0 e mm10.chr4 25429347 175 - 156508116 I a score=10653.000000 s hg38.chr1_KI270760v1_alt 63981 6 + 109528 CAAA--------tg s panTro4.chr1 30500513 6 + 228333871 CAAA--------tg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30089751 6 - 229942017 CAAA--------tg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33384624 6 + 229590362 CACA--------tg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29895876 6 - 227556264 CACA--------tg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659256 6 + 220367699 CACG--------TG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175567 6 - 130588469 CACA--------tg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64633701 14 + 155834243 CACATGGGGATCtg i calJac3.chr7 C 0 C 0 s canFam3.chr2 15008043 6 - 85426708 CACA--------TG i canFam3.chr2 C 0 I 11 e mm10.chr4 25429347 175 - 156508116 I e nomLeu3.chr24 541918 3 - 28733288 I a score=814174.000000 s hg38.chr1_KI270760v1_alt 63987 362 + 109528 tttcag-ccattttctgtggctgaaacagaacattgtaggctgagtaatttatccacaatagaggtttattcggttcatggttctggaggctggggagtccaagactgaggggctgcactaggtgagggcctttttgctgtgtcataatgtggcatagggcatcacatggtgagagagtgcgtgagagagggtaagaaggggcttactttgtttttatagtagacccactcccaccataatgacatgaattcatttcacattcatccattaatcactgaaagatcacacatctccacactgttgcatgagggattacgtttccaacacaaggaactttgggaaacacactcaagccatagcaC s panTro4.chr1 30500519 362 + 228333871 tttcag-ccattttctgtggctgaaacagaacattgtaggctgagtaatttatccacaatagaggtttattcggttcatggttctggaggctggggagtccaagactgaggggctgcactaggtgagggcctttttgctgtgtcataatgtggcatagggcatcacatggtgagagagtgcgtgagagagggtaagaaggggcttaccttgtttttatagcagacccactcccaccataatgacgtgaattcatttcacattcatccattcatcactgaaagatcccacatctccacactgttgcatgagggattatgtttccaacacaaggaactttgggaaacacactcaagccatagcaC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30089757 362 - 229942017 tttcag-tcattttctgtgactgaaacagaacattgtaggctgagtaatttatccacaatacaggtttattcggttcatggttctggaggctggggagtccaagattgaggggccacactaggtgatggcctttttgctgtgtcataacgtggcatagggcatcacggggtgagagagtgcgtgacagagggcaagaaggggcttaccttgtttttatagcagacccactcccaccataatgacatgaattcatttcacattcatccattaatcaccgaaagatcccacatctccacactgttgcatgaggaattacgtttccaacacaaggaacttcgggaaacacactcaagccctagcaC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33384630 362 + 229590362 tttcag-tcattttctgtggctgaaacagaacatcgcaggctgggtaatttatccacaatagaggtttatttggttcatggttctggaggctgtggagtccaagatcgagaggctgcactaggtgagcgcctttctgccatgtcataacatggcacagggcatcacatggcgagagagtgcatgggagagggcaagaaggggcttaccttgttttcatagcagacccgctcccaccataatgacatgaattcatttcacattaatccatcagtcaattaaagatcccacatctccacactggtgcatgagggattacgtttccaacacaaggaactttgggaaaaacactcaagccatagcaC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29895882 362 - 227556264 tttcag-tcattttctgtggctgaaacagaacatcgcaggctgggtaatttatccacaatagaggtttatttggttcatggttctggaggctgtggagtccaagatcgagaggctgcactaggtgagcgcctttctgccatgtcataacatggcacagggcatcacatggcgagagagtgcatgggagagggcaagaaggggcttaccttgttttcatagcagacccgctcccaccataatgacatgaattcatttcacattaatccatcagtcaattaaagatcccacatctccacactggtgcatgagggattacgtttccaacacaaggaactttgggaaacacactcaagccatagcaC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659262 362 + 220367699 TTTCAG-CCATTTTCTGTGGCTGAAACAGAACATcgcaggctgggtaatttatccacaatagaggtttatttggttcatggttctggaggctgtggAGTCCAAGATCCAGAGGCTGCACTAGGTGAGCGCCTTTCTGCCATGTCATAACATggcacagggcatcacatggcgAGAGAGTGCATGGGAGAGGGCAAGAAGGGGCTTACCTTGTTTTCATAGCAGACCCGCTCCCACCATAATGACATGAATTCATTTCACATTAATCCATCAGTCAATTAAAAATCCCACATCTCCACACTGGTGCATGAGGGATTACGTTTCCAACACAAGGAACTTTGGGAAACACACTCAAGCCATAGCAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175573 362 - 130588469 tttcag-ccattttctgtggctgaaacagaacatcgcaggctgggtaatttatccacaatagaggtttatttggttcatggttctggaggctgcggagtccaagatcgagaggctgcactaggtaagcgtctttctgccatgtcataacatggcacagggcatcacatggcgagagagtgcatgggagagggcaagaaagggcttaccttgttttcgtagcagacccactcccaccataatgacatgaattcatttcacattaatccatcagccaattaaagatcccacatctccacactggtgcacgagggattacgtttccagcacgaggaactttgtgaaacacactcaagccatagcaC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64633715 348 + 155834243 tcccagtccgtttcctgtggctgaaacagaacattgtgggctgggtaatttatccacaatagagggttacttggttcatggttctggaggctggagagtccaagatcgaggggccgcacttggtgaaggtctttttgctgtgtcataacctagcatagggcatcgcatggtg--------------agagggcaagaaggggtttacctgatttttatagcaagcccactcccaccataacaacatgaactca-ttcacgttcatccatgaatcacttaaaggtcccccttctccacattgttgcatgagggattaagtttccaacacaaggaactttgggaaatacactggagccgcagcaC i calJac3.chr7 C 0 C 0 e mm10.chr4 25429347 175 - 156508116 I e nomLeu3.chr24 541918 3 - 28733288 I e canFam3.chr2 15008049 11 - 85426708 I a score=24773.000000 s hg38.chr1_KI270760v1_alt 64349 9 + 109528 GGTCCTCCG s panTro4.chr1 30500881 9 + 228333871 GGTCCTCCG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090119 9 - 229942017 GGTCCTCCA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 541921 9 - 28733288 GGTCCACAG i nomLeu3.chr24 I 3 C 0 s rheMac3.chr1 33384992 9 + 229590362 GGTCCTCCG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896244 9 - 227556264 GGTCCTCCG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659624 9 + 220367699 GGTCCTCCG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175935 9 - 130588469 GGTCCTCCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634063 9 + 155834243 TGTCCTCCG i calJac3.chr7 C 0 C 0 e mm10.chr4 25429347 175 - 156508116 I e canFam3.chr2 15008049 11 - 85426708 I a score=208148.000000 s hg38.chr1_KI270760v1_alt 64358 70 + 109528 CTGTCCCTCTCCCGCCCTCA-------CCATCTCGGGTCTCTCTGTCGGGCtttgacagagcaggtctggcctgaac s panTro4.chr1 30500890 70 + 228333871 CTGTCCCTCTCCCGCCCTCG-------CCATCTCGGGTCTCTCTGTCAGGCTTTGACAGAGCAGGTCTGGCCTGAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090128 70 - 229942017 CTGTCCCTCTCCCACCCTCA-------CCATCTCGGGTCTCTCTGTCGGACTTTGACAGAGCAGGTCTGGCCTGAAC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 541930 70 - 28733288 CTATTTTTCTCCAGCCCCCAAACACCTCTCTCTC---CCTCCCCATCCAGCTTTGACAGGGCAGCTCTGGCTC---- i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33385001 70 + 229590362 CTGTCCCTCTCCCGCCCTCG-------CCATCTCAGGTCTCTCTGCCGGGCTTTGACAGAGTAGGTCTGGCCTGAAC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896253 70 - 227556264 CTGTCCCTCTCCCGCCCTCG-------CCATCTCAGGTCTCTCTGCCGGGCTTTGACAGAGTAGGTCTGGCCTGAAC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659633 70 + 220367699 CTGTCCCTCTCCCGCCCTCG-------CCATCTCAGGTCTCTCTGCCGGGCTTTGACAGAGTAGGTCTGGCCTGAAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28175944 70 - 130588469 CTGTCCCTCTCCCGCCCTCG-------CCATCTCAGGTCTCTCTGTCAGGCtttgacagagcaggtctggcctgaac i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634072 70 + 155834243 CTGTCCTTCTCCCGCCCTTG-------CCATCTTGGGCCTCTCTGTCCGGCTTTGACAGAGCTGGTCTGGCCTGAAC i calJac3.chr7 C 0 C 0 s canFam3.chr2 15008060 70 - 85426708 CTGTCCCTCTTCTGACCCCC-------TAACGTCTTATGTGTCTGTCAGATTTTGAAGAAGTGGGTCTGGCCTGAAC i canFam3.chr2 I 11 C 0 e mm10.chr4 25429347 175 - 156508116 I a score=891631.000000 s hg38.chr1_KI270760v1_alt 64428 305 + 109528 tcagtctgcagaagtagattctccatgtgcatgaaaattgcccatttactttgagaatc--ccatagaaa----TCG--TTctcctcctccgcctgctcttctcctccaccCGTTAACGATGGG-----ACACTGGCATGCTA------GCATTCTTCCTTTCTGCC-TTTATGAGCAA-------------ATATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAATGCAGCATTTTCTTTTAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA s panTro4.chr1 30500960 302 + 228333871 TCAGTCTGCAGAAATAGATTCTCCATGTGCATGAAAATTGCCCATTTACTTTGAGAATC--CCACAGAAA----TCG--TTCTCCTCC---ACCTGCTCTTCTCCTCCACCTGTTAATGATGGG-----ACACTGGCATGCTA------GCATTCTTCCTTTCTGCC-TTTATGAGCAA-------------ATATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAATGCAGCATTTCCTTTTAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATAAGAGCATCTCTTGTTCA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090198 304 - 229942017 TCAGTCTGCAGAAATAGATTCTCCATGTGCATGAAAATTGCCCATTTACTTTGAGAATC--CCACAGAAA----TCGTCTTCTCCTCC---ACCTGTTCTTCTCCTCCACCTGTTAACGATGGG-----ACACTGGCATGCTA------GCATTCTTCCTTTCTGCC-TCTATGAGCAA-------------ATATGTAATAAGAGACTCATCGCTGACTCTTTGACAAAATGCAGCATTTCCTTTCAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAACTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 542000 280 - 28733288 ----TATGTGAAAATGGATTTTTC-TGTTCACA------------------TGAAAATC--TCATGGAAA----ACA--ATATCTTCT---TCTTCtttttttttttttttttttga-gacggagcctcactctgtcacAATA------GCTT-------------C-TTTATAAACAAACACTCTGTCCCCACATGTGGGAGGATTATCAACAACAACTACATGGGAAAATGTGGCTCCTCCTTTCAAGCCACATTATGTTCAAAGCAG--TGTCCACTCCACCATCTGTTACCTGTTTCC-T--TTCTCTTCTTCTGAATGAGAGCAGCCCGTGTTCA i nomLeu3.chr24 C 0 I 409 s rheMac3.chr1 33385071 288 + 229590362 TCAGTCTGCAGAAATAGATTCTCCACGTGCATGAAAATTGCCCATTTACTTTGAGAATC--CCACAGAAA----TCA--TTCTTCTCC-----------------TCCACCTGTTAACGATGGG-----ACACCGGCATGAGG------GCATTCTTCCCTTCTGCC-TTTATGAGCAA-------------ATATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAGTGCAGCATTTCCTTTTAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896323 288 - 227556264 TCAGTCTGCAGAAATAGATTCTCCACGTGCATGAAAATTGCCCATTTACTTTGAGAATC--CCACAGAAA----TCA--TTCTTCTCC-----------------TCCACCTGTTAACGATGGG-----ACACCGGCATGAGG------GCATTCTTCCCTTCTGCC-TTTATGAGCAA-------------ATATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAATGCAGCATTTCCTTTTAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659703 288 + 220367699 TCAGTCTGCAGAAATAGATTCTCCATGTGCATGAAAATTGCCCATTTACTTTGAGAATC--CCACAGAAA----TCA--TTCTTCTCC-----------------TCCACCTGTTAACGATGGG-----ACACCGGCATGAGG------GCATTCTTCCCTTCTGCC-TTTATGAGCAA-------------ATATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAATGCAGCATTTCCTTTTAAGCTATATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATaaccttttctat--ttcttttcttttaaatgagaGCATCTCTTGTTCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176014 288 - 130588469 tcagtctgcagaaatagattctccatgtgcatgaaaattgcccatttactttgagaatc--ccacagaaa----tca--ttcttctcc-----------------tccacctgttaatgatggg-----acaccggcatgagg------gcattcttcccttctgcc-tttatgagcaa-------------atATGTGATAAGAGGCTCATCGCTGACTCTTTGACAAAATGCAGCGTTTCCTTTTAAGCTACATTATGTTAAGAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634142 304 + 155834243 TCAGTCTGCAGAAATAGATTCTCCATATACATGAAAACTGCTCATTTACTTTGAGAATC--CCACAGAAA----A-A--TTCTTCTCCTGCACCTGTTCTTCTCCTCCACCTGTTAAGGATGGG-----ACCCCGGCATGCTA------GCACTCTTCCCTTCTGCC-TTTACGAGCAA-------------ATATGTGATAAGAGGCTCATCGCGTACTCTTTGACAAAATGCAGCATGTCCTTTCAAGCTGCGTTATGTTAAAAGCAGAATTTCCTCTCTACTAGCTGATAACCTTTTCTGT--TTCTTTTCTTTTAAATGAGAGCATCTCTTGTTCA i calJac3.chr7 C 0 C 0 s mm10.chr4 25429522 272 - 156508116 TCTGTCTGTGGAAATAGATTCTCTGGTTCTAT---AATTGTCCTCTTATCTTGTGGCTCTGCTGCAAAAC----CCA--TTTTCCTTC--------------------ACACGGCA-------G-----ACGCCGGGATGCCACGAGGCACCTCCCCACCCTCTGCCTTTTAGGAACAG-------------AAAAGTGGAGAGAG------------CCATTTGCCAAAATGAGACACTAGCTTTGAGGCT-CGTGGCACTGAGAGCCCAGC-TCCTCTCTCCTAGCTGACAGCCTTTTCCTTTGTCCTTGTTTTTTAAATGAGAGCATCTTTTGTTCA i mm10.chr4 I 175 C 0 s canFam3.chr2 15008130 286 - 85426708 TCAGTCTACAGAAATGGATTCTCTGTGCACAAGGACACTGTCCGCTGACCTCGGGAATC--TCACGGAAAGTGTCCA--TTACTCTCC----------------TCCTGCTGGTTTATGATGGG-----GCACCTGTGCCTCA------GCCTTCTTCCCTTCTGCT-TTTATGAACAA-------------TTAC-TGGCAAGAGGCTCATTGCCAGCTCCTTGACAAAACACAGCACTTTCTTTTAAGC-ATATTATGCTAAAATCACAATTTCTTCTCTACTAGCTGAGAACCTTTTC-----TTCTTTTCTTTTAAATGACTG--TTTCTCATTCA i canFam3.chr2 C 0 C 0 a score=142225.000000 s hg38.chr1_KI270760v1_alt 64733 32 + 109528 TTCTTGTGGAAGATCTGTTAAGGGAGATAAAT s panTro4.chr1 30501262 32 + 228333871 TTCTTGCGGAAGATCTGTTAAGGGAGATAAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090502 32 - 229942017 TTCTTGTGGAAGATCTGTTAAGGGAGATAAAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 542689 32 - 28733288 TTCTTGTAAAAGATTTGCTAGGGGAGATGAAT i nomLeu3.chr24 I 409 I 1332 s rheMac3.chr1 33385359 32 + 229590362 TTCTTGTGGAAGATCTGTTAAGGCAGATAAAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896611 32 - 227556264 TTCTTGTGGAAGATCTGTTAAGGCAGATAAAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32659991 32 + 220367699 TTCTTGTGGAAGATCTGTTAAGGCAGATAAAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176302 32 - 130588469 TTCTTGTGGAAGATCTGTTAAGGCAGATAAAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634446 32 + 155834243 TTCTTGTGGAAGATCTGTTAAGGGAGATAAAT i calJac3.chr7 C 0 C 0 s mm10.chr4 25429794 32 - 156508116 TTCTTGAGGCAGGTCTGTTAAGAGAGATGAAT i mm10.chr4 C 0 C 0 s canFam3.chr2 15008416 32 - 85426708 TTCTTGTGGAAGATCTGTTAAGGGAGATGAAT i canFam3.chr2 C 0 C 0 a score=976173.000000 s hg38.chr1_KI270760v1_alt 64765 354 + 109528 TGAGAAAAGTCGTGAACTCCTGAAAAGATACAGCTTTTTAAAAAGAATTCATTTGCAGCATGAAATCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGCTTTGAATTGAGTTGTGGCTCTGTCTGTAA----GTACCTGCTCCTTTCA-------------CTGTTTCAAGCTGGGATACTCAGAGAAGCG-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCGTGTGGTAATCA-GGTAAACTCCCACCTGTGCCCTCTCACCTGGACGGTGGAGGAGTCTGAGGGAGGCCTCAATTCTGAATGCT--C--CCTGAATTCCCCATCTGCTTGAGCCCAGACCCTA- s panTro4.chr1 30501294 354 + 228333871 CGAGAAAAGTCGTGAACTCCTGAAAAGATACAGCTCTTTAAAAAGAATTCATTTGCAGCATAAAACCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GATGGAATTGCTTTGCTTTGAATTGAGTTGTGGCTCTGTCTGTAA----GTACCTGCGCCTTTCA-------------CTGTTTCAAGCTGGGATACTCAGAGAAGCG-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCGTGTGGTAATCA-GGTAAACTCCCACCTGTGCCCTCTCACCTGGACAGTGGGGGAGGCTGAGGGAGGCCTCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTGAGCCCAGACCCTA- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090534 354 - 229942017 TGAGAAAAGTCGTGAACTCTTGAAAAGATATAGCTCTTTAAAAAGAATTCATTTGCAGCATGAAATCTACTGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGCTTTGAATTGAGTTGTGGCTCTGTCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGCTGGGATACTCAGAGAAGCA-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCATGTGGTAATCA-GGTGAACTCCCACCTGTGCCCTCTCACCTGGACAGCGGGGGAGGCTGAGGGAGGCCTCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTGAGCCCAGACCCTA- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33385391 354 + 229590362 CGAGAGAAGTCGTGAACTCCTGGAAAGATATAGCTCTTTAAAAAGAATTCATTTGCAGCATGAAATCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGATTTAAATTGAGTTGTGGCTCTGTCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGGTGGGATACTCAGAGAAGCG-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCGTGTGGTAATCA-GGTAAACTCCCACCTGTGCCTTCTCACCTGGACAGCAGGGGAGGCTGAGGGAGGCCTCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTGAGCCCAGATCCTA- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896643 354 - 227556264 CGAGAGAAGTCATGAACTCCTGGAAAGATATAGCTCTTTAAAAAGAATTCATTTGCAGCATGAAATCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGATTTAAATTGAGTTGTGGCTCTGTCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGGTGGGATACTCAGAGAAGCG-TGCAGATCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCGTGTGGTAATCA-GGTAAACTCCCACCTGTGCCTTCTCACCTGGACAGCAGGGGAGGCTAAGGGAGGCCTCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTGAGCCCAGATCCTA- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660023 354 + 220367699 TGAGAGAAGTCATGAACTCCTGGAAAGATATAGCTCTTTAAAAAGAATTCATTTGCAGCATGAAATCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGATTTAAATTGAGTTGTGACTCTGTCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGGTGGGATACTCAGAGAAGCG-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCGTGTGGTAATCA-GGTAAATTCCCACCTGTGCCTTCTCACCTGGACagcaggggaggctgagggaggcctCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTGAGCCCAGACCCTA- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176334 354 - 130588469 CGAGAGAAGTCGTGAACTCCTGGAAAGATATAGCTCTTTAAAAAGAATTCATTTGCAGCATGAAATCTACCGAG--TGAGTGTGTAAACCATGGAGTCATTACAATGT-GGTGGAATTGCTTTGATTTAAATTGAGTTGTGGCTCTGTCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGGTGGGATACTCAGAGAAGCG-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGCCCCATGTGGTAATCA-GGTAAACTCCCATCTGTGCCCTCTCACCTGGACAGCAGGGGAGGCTGAGGGAGGCCTCAATTCTGAATGCT--C--CCCGAATTCCCCATCTGCTTAAGCCCAGACCCTA- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634478 352 + 155834243 GGAGAAAAGTCATGAACTCCTGGAAAGATACAGCTCTTTAAAGAGAATTCGTTTGCTGCATGAAATCT-CCGAG--TGAGTGTGTAAACCGCGGAGTCATTACAATGT-GGTGGAATTGCATTGCTTTGAATTGAATTGTGGCTCTGCCTCTAA----GTACCTGCTCCTGTCT-------------CTGTTTCAAGCCGTGATACTCAGAGAAGCA-TGCAGACCTGGCTGGGTCTGTCAGCCCTGCCTTGGATCCTTATAGTAATCA-GGTCAACTCCCACCTGTGCCCTCTCACCTGGACA-TGGGGGAGACTGAGGGAGGCCTCAATTCTGAATGCT--C--CTCTAATTCCCCATCTGCTTGAGTCCAGACCCTA- i calJac3.chr7 C 0 C 0 s mm10.chr4 25429826 315 - 156508116 CTGGAAAAGTCATGCACTCTGGAGAAGATAGGGCTC-TTAAAAAGCATTCGTGTGGGACTTGAGATTTGCAGAGCATGCGAATGTGGGCCGAGGGGTGATTA-GGCGC-AACCGGCTTGTGCTTCTATGAAGTGGGGAGTAGATCTGACTGTGAAGGCGCAGTCACTCCTAGGA--------------TGTTTCAGACTTGGGTGCTCTGGGAAGCA--------------GAGTGTGCCTGCTCCATTTTGTC---------TTGTCAGGGTAGATATCCACCTGATCCCT----------AAGCAGGAAAA-------------TTGCTTCTGGATGCTTCC--CCCTAAATCCCAGTGCACTTCAGTCCAAGCCTTA- i mm10.chr4 C 0 I 2387 s canFam3.chr2 15008448 298 - 85426708 CTAGAAAAGTCACGAACTCTTGAGAAGGTCTGGCTCTTTAAAATGCATTTATCTGCAATATAAA------------TGAGTATATATACCATGGGGTCATTACAGGACAGGTTGAATTGTTTTGCTTTGGA-TGAATTGTAGATCTGTCTGTAA----GTGGCTGCTCCTGACTGGTGCTCAAGCTTCTATTTCATGCTGTGAGACTCAAGGAAGTGGTGTGGGTTTGGCTGGGTCTATCAGACCTGCCTTGACCC----------TCA-GGT----------------------------------------------------CTCAGTTCTGGAGTCT--CCTCCCTAATTCCCT-TCTGCTTAAACACAGACCCCTT i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 542721 1332 - 28733288 I a score=125620.000000 s hg38.chr1_KI270760v1_alt 65119 71 + 109528 CTCTGGTCAACTCTGTCCCTTAGtaaagtaaccaaccatttccagttggcagggaccgagtgcattcttgg s panTro4.chr1 30501648 70 + 228333871 CTCGGGTCAACTCTGTCC-TTAGtaaagtaactaatcatttctagttggcagggaccgagtgcattcttgg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090888 32 - 229942017 CTCTGGTCAACTCTGTCC-TTAGTAAAGTAACC-------------------------------------- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33385745 70 + 229590362 CTCTGGTCAACTCTGTCT-GTAAtaaagtaaccaaccatttctagttggcagggaccgaggtcattcctgg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29896997 53 - 227556264 CTCTGGTCAACTCTGTCC-GTAATAA-----------------AGttggcagggaccgaggtcattcctgg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660377 70 + 220367699 CTCTGGTCAACTCTGTCC-GTAATAAAGTAACCAACCATTTCTAGTTGGCAGGGACCGAGGTCATTCCTGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176688 70 - 130588469 CTCTGGTCAACTCTGTCC-GTAAtaaagtagccaaccatttctagttggcagggaccaaggtcattcctgg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634830 70 + 155834243 CTCTGGCCAGCTCTGTCC-TTAGtaaggtgaccaaccatttctagttggcagggaccgagggtgctcctag i calJac3.chr7 C 0 C 0 s canFam3.chr2 15008746 70 - 85426708 TTCGGGCCAACTCTGTTG-TGAGTTgggtaatcaactctctcgaattgcccaggactgagggcattctcag i canFam3.chr2 C 0 I 26 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 542721 1332 - 28733288 I a score=271655.000000 s hg38.chr1_KI270760v1_alt 65190 122 + 109528 tatgaggcacttccagcgctgaaaccagagaagtcccaggccacgaggatgacttggtcaccctGTTCTTTGTGGCTCCTTACATTACTACCAGTGAGCCAAGACCTGTGAGGAGAGGCAGG s panTro4.chr1 30501718 122 + 228333871 tatgaggcacttccagcgctgaaaccagggaagtcccaggccacgaggatgacttggtcaccctGTTCTTTGTGGCTCCTTACATTACTACCAGTGAGCTAAGACCTGTGAGGAGAGGCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30090920 101 - 229942017 ---------------------aaaccagggaagtcccaggccacgagggtgagttggtcaccctGTTCTTTGTGGCTCCTTACATTATTACCAGTGAGCTAAGACCTGTGAGGAGAGGCAGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33385815 122 + 229590362 tatgaggcacttccagcgctgaaaccagggaagtcccaggccacgagggtgagttggtcaccctGTTCTTTGGGGTTCCTTACATTATCGCCATTGAGATAAGACCTGTGAGGAGAGGCAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897050 122 - 227556264 tatgaggcacttccagcgctgaaaccagggaagtcccaggccacgagggtgagttggtcaccctGTTCTTTGGGGTTCCTTACATTATCGCCATTGAGATAAGACCTGTGAGGAGAGGCAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660447 122 + 220367699 TATGAGGCACTTCCAGCGCTGAAACCAGGGAAGTCCCAGGCCACGAGGGTGAGTTGGTCACCCTGTTCTTTGGGGTTCGTTACATTATCGCCATTGAGATAAGACCTGTGAGGAGAGGCAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176758 122 - 130588469 tatgaggcacttccagggctgaaaccagggaagtcccaggccatgagggtgagttggtcaccctGTTCTTTGGGGTTCCTTACATTATCGCCATTGAGATAAGACCTGTGAGGACAGGCAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64634900 122 + 155834243 tatgaggcacttccagcgctgaaaccaggtaaatcccaggccacgagggtgagttggtcaccctaTTCCTTGGGGCTCCTGACATTATCACCAGTGAGCCAAGACCTGTGAGAAGAGGAAGG i calJac3.chr7 C 0 I 536 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 542721 1332 - 28733288 I e canFam3.chr2 15008816 26 - 85426708 I a score=99526.000000 s hg38.chr1_KI270760v1_alt 65312 45 + 109528 CGAGGCC--TCCATGCCCTGCCCTGAGGGACCAGCCGTGGTGCTGGT s panTro4.chr1 30501840 45 + 228333871 CGAGGCC--TCCATGCCCTGCCCTGAGGGACCAGCCATGGTGCTGGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30091021 45 - 229942017 CGAGGCC--ACCGTGCCCTGCCTTGAGGGACCAGCCGTGGTGCTGGT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33385937 45 + 229590362 CGAGGCC--ACTGTGCCTTGCCCTGAGGGACCAGCCGTGGTGCTGGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897172 45 - 227556264 CGAGGCC--ACTGTGCCTTGCCCTGAGGGACCAGCCGTGGTGCTGGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660569 45 + 220367699 CAAggcc--actgtgccttgccctgAGGGACCAGCCGTGGTGCTGGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176880 45 - 130588469 TGAGGCC--ACTGTGCCCTGCCCTGAGGGACTAGCCGTGGTGCTGGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64635558 47 + 155834243 CGAGGCCCAACCATGCCCTGCCCAGAGGGGCCCAGCATGGTGCTGGT i calJac3.chr7 I 536 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 542721 1332 - 28733288 I e canFam3.chr2 15008816 26 - 85426708 I a score=162053.000000 s hg38.chr1_KI270760v1_alt 65357 61 + 109528 GTTCGCTGATGTGCAC---AGAAGAGCAGGGCTCCTTAGGGAGGCGTGGCTGGAGAAGGTGACA s panTro4.chr1 30501885 61 + 228333871 GTTCGCTGATGTGCAC---AGAAGAGCAGGGCTCTTTAGGGAGGCGTGGCTGGAGAAGGTGACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30091066 61 - 229942017 GTTCGCTGATGTGCAC---AGAAGAGCCGGGCTCTTTAGGGAGGCATGGCTGGAGAAGGTGACA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 544053 63 - 28733288 GTTGACTGATGTGCTCCA-GAGAGAGCAGGGCCCTTTAAGGAGGTGTGGCTGGAGAAGGTGGCA i nomLeu3.chr24 I 1332 I 876 s rheMac3.chr1 33385982 64 + 229590362 GTTCACTGATATGCACAGGAGAAGAGCAGCGCTCTTCAGGGAGGCGTGGCTGGAGAAGGTGACA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897217 64 - 227556264 GTTCACTGATATGCACAGGAGAAGAGCAGCGCTCTTCAGGGAGGCGTGGCTGGAGAAGGTGACA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660614 64 + 220367699 GTTCACTGATATGCACAGGAGAAGAGCAGCACTCTTCAGGGAGGCGTGGCTGGAGAAGGTGACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176925 61 - 130588469 GTTCACTGATATGCAC---AGAAGAGCAGCGCTCTTCAGGGAGGCGTGGCTGGAGAAGGTGACA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64635605 64 + 155834243 GTTCGCTGATGTGCACAGGGGAAGAATCAGGCTCTTTAGGGAGGTGTGGGCGGCAAAGGTGACA i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e canFam3.chr2 15008816 26 - 85426708 I a score=1227420.000000 s hg38.chr1_KI270760v1_alt 65418 518 + 109528 GAGCCTCACAGCTGGGTTCATGGGGTTCTGTCCTCTTTCTGCACTGTCTCATTTACTCCTCACAGTCAGTGTCAGGTGACAACACTGAGGCTCAGCTCGGAGGCATCACAGTGACTCATACCAGTCATCACAGTGCAGTGGCATTGTTTTGCTTTGAATGGAACTGTAGCTCTG--TCTCCAAGCACCGCTTCTGCTTGTGCACCCCATCTCTGTCTCCCAGACCAGGGCACCTCCAGAGCTCAGCGGAACTGCAGGAGCCCATGCCACGTGCAGGAGTGGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTAGTCACTTCACTCAGACctctagtgtccagca-cagaccttggcacaga---catgggtgcCTTGCAGTGTGCC-CTGGTGAAGGGGCCTAGGTGGGGAAGGGGAGGCCCCTCCTCCTTGGCCAGTCTCTCTAGGTCCCAGACTCCCTCACTGCCTCCAACCACACAGAGGCTTCAGCTCCCCACCTGGGCCTGCTTGGGGT s panTro4.chr1 30501946 518 + 228333871 GAGCCTCACAGCTGGGTTCATGGGGTTCTGTCCTCTTTCTGCACTGTCTCATTTACTCCTCACAGTCAGTGTCAGGTGACAACACTGAGGCTCAGCTCGGAGGCATCACAGTGACTCATACCAGTCATCGCAGTGCGGTGGCATTGTTTTGCTTTGAATGGAACTGTAGCTCTG--TCTCCAAGCACCGCTTCTGCTTGTGCACCCCATCTCTGTCTCCCAGACCAGGGCGCCCCCAGAGCTCAGCGGAACTGCAGGAGCCCGTGCCACGTGCAGGAGTGGAGGCACAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTAGTCACTTCACTCAGACctctagtgtccagca-cagaccttggcacaga---catgggtgcCTTGCAGTGTGCC-CTGGTGAAGGGGCCTAGGTGGGGAAGGGGAGGCCCCTCCTCCTTGGCTAGTCTCTCTAGGTCCCAGACCCCCTCACTGCCTCCAACCACACAGAGGCTTCAGCTCCCCTCCTGGGCCTGCTTGGGGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30091127 518 - 229942017 GAGCCTCACAGCTGGGTTCATGGGGTTCTGTCCTCTTTCTGCACTGTCTCATTTACTCCTCACAGTCAGTGTCAGGTGACAACACTGAGGCTCAGCTTGGAGGCATCACAGTGACTCATACCAGTCATCACAGTGCGGTGGCATTGTTTTGCTTTGAATTGAACTGTAGCTGTG--TCTCCAAGCACCGCTTCTGCTTGTGCACCCCATCTCTGTCTCCCAGACCAGGGTGCCTCCAGAGCCCAGCGGAACTGCAGGAGCCTGTGCCATGTGCAGGGGTGGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTAGTCACTCCACTCAGCCctctagtgtccagca-cagaccttggcacaga---cataggtgcCTTGCAGTGTGCC-CTGGTGAAGGGGCCTAGGTGGGGAAGGGGAGACCCCTCCTCCTTGGCCAGTCTCTCTAGGTCCCAGACCCCCTCACTGCCTCCAACCACACAGAGGCTTCAGCTCCCCACCTGGGCCTGCTTGGGGT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33386046 514 + 229590362 GAGCCTCACAGCTGGGTTCATGGAGCTCTGTCCTCTTTCTGCACTGTCTCATTTACTCCTCACAGCCAGTGTCAGGTGACAACACTGAGGCTCAGCTTGGAGGCATCACAGTGACTCATACCAGTCATCACAGTGCGGTGGCATTGTTTTGCTTTGAATTGAACTGTAGCTCTG--TCTCCAAGCACCGCTTCTGCATGTGCATCCCATC----TCTCCCAGACCAGAGCACCTCCAGAGCTCAGCGGAACCGCAGGAGCCCATGCCATATGCAGGGGCGGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTATTTACTCCACTCAGCCCTCTAGCGTCCAGCACCAGACCTTGGCACAGA---CATGGGTGCCTTGCAGTGTGCA-CTGGTAAAGGGGCCTGGGAGGGGAAGGGGAGGCCCCTCCTCCTTGGCCAGCCTCTCTAGGTCCCAGACCCCCTCACTGCCTCAAACCATACAGAGGCTTCAGCTCCCCA-CCGGGCCTGCTTGGAGT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897281 514 - 227556264 GAGCCTCACAGCTGGGTTCATGGAGCTCTGTCCTCTTTCTGCACTGTCTCATTTACTCCTCACAGCCAGTGTCAGGTGACAACACTGAGGCTCAGCTTGGAGGCATCACAGTGACTCATACCAGTCATCACAGTGCGGTGGCATTGTTTTGCTTTGAATTGAACTGTAGCTCTG--TCTCCAAGCACCGCTTCTGCATGTGCATCCCATC----TCTCCCAGACCAGAGCACCTCCAGAGCTCAGCGGAACCGCAGGAGCCCATGCCATATGCAGGGGCGGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTATTTACTCCACTCAGCCCTCTAGTGTCCAGCACCAGACCTTGGCACAGA---CATGGGTGCCTTGCAGTGTGCA-CTGGTAAAGGGGCCTGGGAGGGGAAGGGGAGGCCCCTCCTCCTTGGCCAGCCTCTCTAGGTCCCAGACCCCCTCACTGCCTCAAACCATACAGAGGCTTCAGCTCCCCA-CCGGGCCTGCTTGGAGT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32660678 515 + 220367699 GAGCCTCACAGCTGGGTTCATGGAGCTCTGTCCTCTTTCTGCACtgtctcatttactcctcacagcCAGTGTCAGGTGACAACACTGAGGCTCAGCTTGGAGGCATCACAGTGACTCATACCAGTCATCACAGTGCGGTGGCATTGTTTTGCTTTGAATTGAACTGTAGCTCTG--TCTCCAAGCACCGCTTCTGCATGTGCATCCCATC----TCTCCCAGACCAGAGCACCTCCAGAGCTCAGCGGAACCGCAGGAGTCCATGCCATATGCAGGGGCAGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTAGTTACTCCACTCAGCCCTCTAGTGTCCAGCACCAGACCTTGGCACAGA---CATGGGTGCCTTGCAGTGTGCA-CTGGTAAAGGGgcctgggaggggaaggggaggcccCTCCTCCTTGGCCAGCCTCTCTCGGTCCCAGACCCCCTCACTGCCTCAAACCATACAGAGGCTTCAGCTCCCCACCCGGGCCTGCTTGGAGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28176986 521 - 130588469 GAACCTCACAGCTGGGTTCATGGAGCTCTGTCCTCTTTCTGCACCATCTCATTTACTCCTCACAGCCAGTGTCAGGTGACAACACTGAGGCTCAGCTTGGAGGCATCACAGTGACTCGTACCAGTCATCACAGTGGGGCGGCATTGTTTTGCTTTGAATTGAATTGTAGCTCTGTCTCTCCAAGCACCGCTTCTGCATGTGCATCCCATCTCTGTCTCCCAGACCAGGGCACCTCCAGAGCTCAGCGGAACCGCAGGAGCCCATGCCATATGCAGGGGCAGAGGCAGAAGCTGGCAGGGGCTGGGTGAGTGGGGCAAGGTCCTAGTTACTCCACTCAGCCCTCTAGTGTCCAGCACCAGACCTTGGCACAGA---CATAGGTGCCTTGCAGTGTGCA-CTGGTAAAGGGGCCTGGGAGGGGAAGGGGAGGCTCCTCCTCCCTGGCCAGCCTCTCTAGGTCCCAGACCCCCTCACTGCCTCAAACCATACAGAGGCTTCAGCTCCCCACCTGGGCCTGCTTGGGGT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64635669 522 + 155834243 GAGCCTCCCAGCTGGGTGCATGGGGCTCTGTCCTCTTTCTGCATGGTCTCATTTACTCCTCGCAGCCAGTGTcaggtgacaacactgaggctcagagggaaggcatcacagtgactcataccagttgtcacagagcagtggcatcgttctgctttgaattgaactgtagctctg--tctccaagcaccgcttctgcgtgtgcatcccatctctggctcCCACACCAGGGAGCCTCCAGAGCTCAGTGGAGCCACAGGAGCCCGTGCTATGTGCAGGGGCTGAGGCACGAGCTGGCAGGTGCTGGGTGAGTGGGGCAAGGTCCTAGTCACTCCACTCAGCCCTCTAGTGTCCAGCA-CAGGTCTTGACACAGACAGCAGAGGTGCCTTGCAGTGTGCACCTGCTGAAGGGGCATGGGTGGGGAAAGGGAGGCCCCTCCTCCTGGGCCAGTCTCTCTAGGTCCCAGACGCCCTCACTGCCTCCAGCCACACAGAGGCTTCTGCTCCCCACCGGGGCCTGCTTGGAGT i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 544116 876 - 28733288 I e canFam3.chr2 15008816 26 - 85426708 I a score=48516.000000 s hg38.chr1_KI270760v1_alt 65936 20 + 109528 TTGACAAGCACCAAAAGTTC-- s panTro4.chr1 30502464 20 + 228333871 TTGACAAGCACCAAACGTTC-- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30091645 20 - 229942017 TTGACAAGCACCAAACGTTC-- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33386560 20 + 229590362 TTGACAAGCACCAAACGTTC-- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897795 20 - 227556264 TTGACAAGCACCAAACGTTC-- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32661193 20 + 220367699 TTGACAAGCACCAAACGTTC-- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28177507 20 - 130588469 TTGACAAGCACCAAACGATC-- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64636191 20 + 155834243 TTGACAAGCACCAAGCGTTT-- i calJac3.chr7 C 0 C 0 s canFam3.chr2 15008842 20 - 85426708 TTGAGGAATACTAA--GTTCTA i canFam3.chr2 I 26 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 544116 876 - 28733288 I a score=1205466.000000 s hg38.chr1_KI270760v1_alt 65956 438 + 109528 CACTTCAAAATTCATAGAATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTTGGCTCTGACCGCGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--GTGCATGTCTGCAGCCAG-CCCTGTGTGC-TA-CCC-----CAGGAGAATTTTATCTCAGCCCACCTCGCTTCTTCCCTTCTCCTGCCCTCAAAG-GGGAACATTATCTTTGTGAGATGGCTCCAAAGTCGTGGGGAC--------------TGCGGAATCAGGAGAGGCGAGAGTGGAGAGG-------------ATCTGGAAAGATAAACTAATCT----GTATAATGA------AGAAGATTGGGGAGGGAGCAGGAGAAGCTGGCGAAGAGGGGAGGAGGCAGAGGAAAGAGC-CA-GCAAGCTCCTCATCAGGGAATAGTTTGCAGATGTGGCTTCGTGAAGGGCT-CTGCAGCTTTCCCTTCTGAGAAGTGGGGACTTCAGGAAA s panTro4.chr1 30502484 438 + 228333871 CACTTCAAAATTCATAGAATCACAGCATC-CAACGCAGAGGGG----------CCTTTATCTTGGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--ATGCACATCTGCAGCCAG-CCCTGTGTGC-TA-CCC-----CAGGAGAATTTTATCTCAGCCCACCTCGCTTCTTCCCTTCTCCTGCCCTCAAAG-GGGAACATTATCTTTGTGAGATGGCTCCAAAGTCGTGGGGAC--------------TGCGGAATCAGGAGAGGTGAGAGTGGAGAGG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATTGGGGAGGGAGCAGGAGAAGCTGGCGAAGAGGGGAGGAGGCAGAGGAAAGAGC-CA-GCAAGCTCCTCATCAGGGAACAGTTTGCAGATGTGGCTTCGTGAAGGGCT-CTGCAGCTTTCCCTTCTGAGAAGTGGGGACTTCAGGAAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30091665 438 - 229942017 CACTTCAAAATTCATAGAATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTCAGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--GTGCATGTCTGCAGCCAG-CCCTGTGTGC-TA-CCG-----CAGGAGAATTTTATCTCAGCCCACCTCGCTTCTTCCCGTCTCCTGCCCTCTAAG-GGGAACATTATCTTTGTGAGATGGCTCCAAAGTCATGGGGAC--------------TGTGGAATCAGGAGAGGCGAGAGTGGAGAGG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATTGGGGAGGGAGCAGGAGAAGCTGGCGAAGAGGGGAGGAGGCAGAGGAAAAAGC-CA-GCAAGCTCCTCATCAGGGAACAGTTTGCAGATGTGGCTTCGTGAAGGGCT-CTGCAGCTTTCCCTTCTGAGAAGTGGGGACTTCAGGAAA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 544992 450 - 28733288 CATTTTAAAATTC--AGAATCGCAGCATCTCAGGGCTGCAGGG----------ACTTT-CCTAGGCACTTGTTGATAACCTGCCGTGGCAGGAATTGATTTATTATCCTGTGCATATTT-----CAA-CCATTTACACATA-CACACATACACAAGAATGTTATCTTTCCCCACTCAGCTTCTCCCCTTCCCCTGCCTTCTAAATGAGAATATTATCTTTGCAAGATGGTTTCTGATGTGTGTGTGCATGTGTGCGCATGATGCCAAGTCAGGAGAATGGGCAATGGAGGGGGAAGAAAGGAGGAACCAGAAAGAATAAGCTGATCTTTCCATATAATGA------AGATGA--GAGGAGGTAACAGAA----------------ATAGGAGACAGAGAGAACAGCTCT-GCAAGCTTGTC--TGGGGAGCTGCTGG-AGCTTCAGCTT-GTGGAAGGGT-CTGCAGTTCTTGATGGTAAGTAATGGGGCCTGCAGAGAA i nomLeu3.chr24 I 876 I 9118 s rheMac3.chr1 33386580 439 + 229590362 CACTTCAAAATTCATGGCATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTCGGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--GTGCATGTCTGCAGCCAG-CCCTGCGTGC-TA-CCC-----CAGGAGAATTTTATCTCTGCCCACCTCGCTTCTTCCCTTCTCCTGCCCTCAGAG-GGGAACATTATCTTTGTGAGATGGCTCCGAAGTCGTGGGGGC--------------TGCGGAATCAGGAGAGGTGAGAATGGAGAGG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATCGGGGCGGGAGCAGGAGAAGCTGGCGAAGAGGGGACGAGGCAGAGGAAAGAGC-CA-GCCAGCTTCTCATCAGGGAACAGTTTGCAGATGTGGCTTCGTGAAGGTCTCCTGCAGCTTTCCCTTCTGAGAAGTGAGGACTTTAGGAAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29897815 439 - 227556264 CACTTCAAAATTCATGGCATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTCGGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--GTGCATGTCTGCAGCCAG-ccctgcgtgc-ta-ccc-----caggagaattttatctctgcccacctcgcttcttcccttctcctgccctcagag-gggaacattatctttgtgagatggctctgaagtcgtgggggc--------------tgcggaatcaggagaggtgagaatggagagG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATCGGGGAGGGAGCAGGAGAAGCTGGCGAAGAGGGGACGAGGCAGAGGAAAGAGC-CA-GCCAGCTTCTCATCAGGGAACAGTTTGCAGATGTGGCTTCGTGAAGGTCTCCTGCAGCTTTCCCTTCTGAGAAGTGAGGACTTTAGGAAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32661213 439 + 220367699 CACTTCAAAATTCATGGCATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTCAGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGC--GTGCATGTCTGCGGCCAG-CCCTGCGTGC-TA-CCC-----CAGGAGAATTTTATCTCTGCCCACCTCGCTTcttcccttctcctgccctcagag-gGGAACATTATCTTTGTGAGATGGCTCCGAAGTCGTGGGGGC--------------TGCGGAATCAGGAGAGGTGAGAATGGAGAGG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATCGGGGAGGGAGCAGGAGAAGCTGGCGAAGAGGGGACGAGGCAGAGGAAAGAGC-CA-GCCAGCTTCTCATCAGGGAACGGTTTGCAGATGTGGCTCCGTGAAGGTCTCCTGCAGCTTTCCCTTCTGAGAAGTGAGGACTTTAGGAAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28177527 438 - 130588469 CACTTCAAAATTCATGGCATCACAGCATC-CAAGGCAGAGGGG----------CCTTTATCTCAGCTCTGATTGTGAGCCTGCTGTGGCAGGGCCCAGTTTGTGGGC--GTGCATGTCTGCAGCCAG-ccctgcgtgc-ta-ccc-----cgggagaattttatctctgcccacctcgcttcttcccttctcctgccctcagag-gggaacattatctttgtgagatggctccgaagtcgtgggggc--------------tgcggaatcaggagacgtgagaatggagagG-------------ATCTGGAAAGATAAATTAATCT----GTATAATGA------AGAAGATCGGGgagggagcaggagaagctggcgaaga-gggacgaggcagaggaaagagC-CA-GCCAGCTTCTCGTCAGGGAACAGTTTGCAGATGTGGCTTCGTGAAGGTCTCCTGCAGCTTTCCCTTCTGAGAAGTGAGGACTTCAGGAAA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64636211 424 + 155834243 CACTTCAAAATTCATGGAATCACCACATC-CAA----AAGGGC----------CCTTTATCTCAGCTCCGACCGTGAGCCTGCTGTGGCAGG-CCCAGTGTGT-AGC--GTGCACAGCTACAGTCAG-CCCTGTGCGC-TA-CCC-----CAAGAGAATGTTATCTCTGCCCACCT-GCTTCTTCCCTTCTCCGGCCCTCAGAG-GGGAACGTTATCTTCATGAGACATCTCCGAAGTCGTGGGGGC--------------TGCGGAATCAGGAGAGGCGAGAGTGGAGAGG-------------ATCTGGAAAGGTAAATTCATCT----GTATAATGA------AGA----TGGGGAAGGGGCAGGGGAAGCT-GCGAAGAGGGGAGGAGGCAGAGGAAAGAGC-CA-GCAAGCACCTTGTCAGGGGACAGTTTAAAGATGTGGCTTCGTGAAGGGCT-CTA-AGCTTTCCATGGTGAGCA-TGGAGGCTTCAGGAGA i calJac3.chr7 C 0 C 0 s canFam3.chr2 15008862 441 - 85426708 CATCTCAAAATCCATAGAATCACAGCATC-T--TGCAGTTGGCCTTCCTTGATCCTTGATCTTGGCCTTGACTGAGAACCTGCtgtgtcagggccgggcttattttcatgcgcatatccacagccatcccctccactc-tgtccc-----caggagaatgttacttctgcccacttagcatcttcccttctcctgccctcctag-gagaacctgatcctcgtaagatagttccaaaattttggaggg--------------tgcaaaatcagaaa---tgacagtggagaga-------------ATCCAGGAGGGTAAGGTAAGCT----CTATAATGACAGCTGAGGTGGCCAGGCGGTGTG-AGGCAGAGCTGGTGAAGAGCAGAGGAGGAAGTGGAGAAAGC-CAGGCAAGCATAT------------GTGTGGAGGTTTGGCTCAGTGACAGGCT-CTGGAATCCTCCATGGTGAGAAATGGGGACATTGGGGAG i canFam3.chr2 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I a score=560086.000000 s hg38.chr1_KI270760v1_alt 66394 224 + 109528 TGCTACAGGGGCTATAAGCCAGATATTAAGGGCTATAAACCCTTAATTTTCCTT----GAAAGAGGGAAATAA-AAGCAGAAATTCCTCTCCAGGTTATTTTTGGCTGCTGGACTGTTTCTTCCCATTGTCTACCATGTTGAGACGGAGCCTCCTGAGGCCCCAGTGGCAACCGGGTTGTCCTGTT-----------------CTGTGTGGCTTC-AAAAGGGCTGGGGT-AGGTTCACACATGACCG----------- s panTro4.chr1 30502922 224 + 228333871 TGCTACAGGGGCTATAAGCCAGATATTAAGGGCTATAAGCCCTTAATTTTCCTT----GAAAGAGGGAAATAA-AAGCTGAAATTCCTCTCCAGGTTATTTTTGGCTGCTGGACTGTTTCTTCCCATTGTCTACCATGTTGAGACAGAGCCTCCTGAGGCCCCAGTGGCAACCGGGTTGTCCTGTT-----------------CTGTGTGGCTTC-AAAAGGGCTGGGGT-GGGTTCACACATGACCG----------- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30092103 225 - 229942017 TGCTACAGGGGCTATAAGCCAGATATTAAGTGCTGTAAGCCCTTAATTTTCCTT----GAAAGAGGGAAATAA-AAGCTGAAATTCCTCTCCAGGTTATTTTTGGCTGCTGGACTGTTTCTTCCCGTTGTCTACCATGTTGAGATGGAGCCTCCTGAGGCCCCAGTGGCAACCGGGTTGTCCTGTT-----------------CTGTGTGGCTTCAAAAAGGGCTGGGGT-GGGTTCACACATGACCA----------- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33387019 224 + 229590362 TGCTACAGGGGCTATATGCCAGATATTAAGGGCTATAAGCCCTTAATTTTTCTT----GAAAGAGGGAAATAA-AAGCTGAAATTGCTCTCCAGGTTATTTCTGGCTGCTGGACTGTTTCTTCCCATTGTCCGCCATGTTGAGACGGAGCCTCCTGAGGCTCCAGTGGCAACCAGGTCGTCCTGTT-----------------CTGTGCGGCTTC-AAAAGGGCTGGGGT-GGGTTCACACATGACCA----------- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29898254 224 - 227556264 TGCTACAGGGGCTATATGCCAGATATTAAGGGCTATAAGCCCTTAATTTTTCTT----GAAAGAGGGAAATAA-AAGCTGAAATTGCTCTCCAGGTTATTTCTGGCTGCTGGACTGTTTCTTCCCATTGTCCGCCATGTTGAGACGGAGCCTCCTGAGGCTCCAGTGGCAACCAGGTCGTCCTGTT-----------------CTGTGCGGCTTC-AAAAGGGCTGGGGT-GGGTTCACACATGACCA----------- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32661652 224 + 220367699 TGCTACAGGGGCTATATGCCAGATATTAAGGGCTATAAGCCCTTAATTTTTCTT----GAAAGGgggaaataa-aagctaaaattgcTCTCCAGGTTATTTCTGGCTGCTGGACTGTTTCTTCCCATTGTCCGCCATGTTGAGACGGAGCCTCCTGAGGCTCCAGTGGCAACCGGGTCGTCCTGTT-----------------CTGTGCGGCTTC-AAAAGGGCTGGGGT-GGGTTCACACAAGACCA----------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28177965 224 - 130588469 TGCTACAGGAGCTATATGCCAGATATTAAGGGCTATAAGCCCTTAATTTTCCTT----GAAAGAGGGAGATAA-AAGCTGAAATTCCTCTCCAGGTTATTTTTGGCTGCTGGACTGTTTCTTCCCATTGTCCGCCATGTTAAGATGGAGCCTCCTGAGGCTCCAGTGGCAACCGGGTCGTCCTGTT-----------------CTGTGCGGCTTC-AAAAGGGCTGGGGT-GGGTTCACACATGACCG----------- i chlSab2.chr20 C 0 I 202 s calJac3.chr7 64636635 213 + 155834243 TGCTACAGGGACGATAAGGCAGACATTAAAGGCTATAAGCCCTTAATTTTCCTT--------------AATAA-AAGCTGAAATTCCTCCCCAGGTTATTTCAGGCTGCTGGACTGTTTCTTCCCATTGTCCCCCGTGTTGAAACAGGGCCTCCTGAGGCTGCAGTGGCAG-CGAGTTGCCCTGTT-----------------CTGTGCGGCTTC-AAAAGAGCTGGAGT-GGGTTCACACGTGGCCC----------- i calJac3.chr7 C 0 C 0 s canFam3.chr2 15009303 249 - 85426708 GGCTTCATGGGCTGTGAA---------ATGGACCTCCACCCCCTATTTTTTTTTTTTTTTgagatggaaataagaaactgaaattccttttaagattactcttggctgctggactgtTGCTTCAGATTCAGTACTTTGTCAAGACTGGACCCGCTGGGCCTGTAGCGGTAGTCAAGTTATCCTCTTCTGCAGGGACACAGACACTGTGAGGCCCC-AAAAGGGCTGAGGTGGGGCTCACCCTCTGGCATAGGGGGAGTG i canFam3.chr2 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 545442 9118 - 28733288 I a score=7976.000000 s hg38.chr1_KI270760v1_alt 66618 4 + 109528 CATG s panTro4.chr1 30503146 4 + 228333871 CATG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30092328 4 - 229942017 CATG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33387243 4 + 229590362 CGTG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29898478 4 - 227556264 CGTG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32661876 4 + 220367699 CGTG i papAnu2.chr1 C 0 C 0 s calJac3.chr7 64636848 4 + 155834243 CATG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15009552 4 - 85426708 TATG i canFam3.chr2 C 0 I 79 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 545442 9118 - 28733288 I e chlSab2.chr20 28178189 202 - 130588469 I a score=399803.000000 s hg38.chr1_KI270760v1_alt 66622 169 + 109528 CCAGAAATATCGTGGGCACCCAAGTAACACATAAGCAACGGTCCT--CGGGGACGATCAGTTTCACACTGATTGAGCACCTTAGTGAGGGTCAGGCAACCGTCGGGTCAgtgggcatcaccaccctcatcccacagatgaggagacagactcagagatgggaggagactgg s panTro4.chr1 30503150 169 + 228333871 CCAGAAATATCGTGGGCACCCAAGTAACACATAAGCAACGGTCCT--TGGGGACAATCAGTTTCACACTGATTGAGCACCTTAGTGAGGGTCAGGCAACTGTCGGGTCAgtgggcgtcaccaccctcatcccacagatgaggagacagactcagagatgggaggagactgg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30092332 169 - 229942017 CCAGAAATATCATAGGCACCCAAGTAACACATAAGCAACGGTCCT--CGGGGACGATCAGTTTCGCACTGATTGAGCACCTTAGTGAGGGTCAGGTAACCGTCGTGTCAgtgggcatcaccacccccatcccacagatgaggagacagactcagagatgggaggagactgg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33387247 170 + 229590362 CCAGAAATATCGTGGGCACCCAAGTAACACATAAGCAACTGTCCT-ACGGGGACAATCAACTTCACACTGATTGAGCACCTTAGTGAGGGTCAGAAAGCTggcgggtcagtggtcatcaccacccccatcccacagacaaggagacagactcagagatgggaggaacctgg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29898482 170 - 227556264 CCAGAAATATCGTGGGCACCCAAGTAACACATAAGCAACTGTCCT-ACGGGGACAATCAACTTCACACTGATTGAGCACCTTAGTGAGGGTCAGAAAGCTggcgggtcagtggtcatcaccacccccatcccacagacaaggagacagactcagagatgggaggaacctgg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32661880 170 + 220367699 CCAGAAATATCGTGGGCACCCAAGTAACACATAAGCAACTGTCCT-ACGGGGACAATCAACTTCACACTGATTGAGCACCTTAGTGAGGGTCAGAAAGCTGGCGGGTCAGTGGTCATCACCACCCCCATCCCACAGACAAGGAGACAGACTCAGAGATGGGAGGAACCTGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28178391 169 - 130588469 CCAGAAATATTATGGGCGCCCAAGTAACACATAAGC-ACTGTCCT-ACGGGGACAATCAACTTCACACTGATTGAGTGCCTTAGTGAGGGTCAGgaagctggcgggtcagtgggcatcaccacccccatcccacagatgaggagacagacttagagatgggaggaacttgg i chlSab2.chr20 I 202 C 0 s calJac3.chr7 64636852 164 + 155834243 CCAGAGACATCGTGGGCACCCAAGTAACAAGTAAGCAGCTGTCCT-ACGGGGACAATTGACTTCACACTGACGGAGTGTCTTCATGAGGGTCAGGCGACCATCAGGTCAGTGGCGatcac------catcccacagatgaggaggcaggttcagagaggggaggagactgg i calJac3.chr7 C 0 C 0 s canFam3.chr2 15009635 162 - 85426708 CCAGAAATATTGTGGATACCCAAGTAATGAAGAAAAGACTGATCTAAAAGACATAATCAAGTTAAAATTTATAGTGTGCTCT--TGAGAGTCTGGTGACAGACTGGTCGGTGGGtgtcccctcctccacc-------tgagggatgagagtcagaaaggggcagagatttg i canFam3.chr2 I 79 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 545442 9118 - 28733288 I a score=174633.000000 s hg38.chr1_KI270760v1_alt 66791 80 + 109528 ccccaggccacgcagccaggcagtgtgaggccaggtgcaaaccctgtccgcctggcttcacctccacactctttccactc s panTro4.chr1 30503319 80 + 228333871 ccccaggccatgcagccaggcagtgtgaggccaggtgcaaaccctgtctgcctggcttcacctccacactctttccactc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30092501 80 - 229942017 ccccaggccacgcagccaggcagtgtgaggccaggtgcaaaccctgtccacctggcttcacctccacactctttccactc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33387417 79 + 229590362 ccccaggccatgcagccaggcaatgtgaggcc-ggtgcaaaccctgtccacccggcttcacctccacactctttccactc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29898652 79 - 227556264 ccccaggccatgcagccaggcaatgtgaggcc-ggtgcaaaccctgtccacccggcttcacctccacactctttccactc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32662050 80 + 220367699 CCCCAGGCCACGCAGCCAGGCAGTGTGAGGCCGGGTGCAAACCCTGTCCACCCGGCTTCACCTCCACACTCTTTCCACTC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28178560 80 - 130588469 ccccaggccacgcagccaggcagtgtgaggccgggtacaaactctgtccacctggcttcacctccacactcttttcactc i chlSab2.chr20 C 0 C 0 s canFam3.chr2 15009797 79 - 85426708 cccaaggtcacacagccaggcagggtggagctgagtgcaaa-tctgcctgcctggctcaacctctactcattttcctccc i canFam3.chr2 C 0 I 580 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 545442 9118 - 28733288 I e calJac3.chr7 64637016 0 + 155834243 C a score=3528114.000000 s hg38.chr1_KI270760v1_alt 66871 1951 + 109528 ctgcagagaccccctcactgcctcCAACCACATAGAGCCTTCAGCTCCCTACACGGGCCTGCTTGGGGTTTGACAAGCACTATGCGTTCCACTTCAAAATTCATAGAATCACAGCTTCCAAGGCAGAGGGGCCTTTATCTTGGCTCTGACCGCGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTGTGTGCTACCCCAGGAGAATTTTATCTCTGTCCTCTGTGTGGTTGGAGCATAGGAGGCAGAGGCGACATGTGGCTGCGGGACCTGGGCAGGGGTCAGGGAAAGGTCTGTTGTGAGCAGGACTTTCCATATACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTTGTAGGTCGTCCTACGGGCATTCCAGATGGAGGGAAGGGCATTCCAAATGGAGGAGGCAGCAGGAAGAACAGCCAGGAAGTGGGGCCCAGGACACCTTTGGGAAGCAGAGAGGAGTGGCCTTTGGTAGGATCATCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCCATCAGAAAGCAGGAAGCCTCTCCAAGGGCGTGGCTTTGCACAGCTCCCCAAGTCAACAGGAGTCCAGTTATGGAACTCATTTGCATATTAAGACTCAGGTCGGTTTTGTGT-CCCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGCTGTTGGCTCCTATCTTGTTCAGGCCCCGTTCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCAACCCTGCAGCCTCCACAGAGACTCTACAGGCTGGGACCTGGGAGGCCACACATCCAGTCATGAACGGCTGGGTCTGCTCTAGGTCTTGTGATGGCCAATATTGTGGGAGAAGGGCTGATGAGGCTGGGGGTATGGAGTGTCTTAgagagagtcaagactcagggagggtcatgggcctgccccagtcatacaggagtcagtgatggagtctctgggctggaagcccgctgccctggacccctggccgacctctctgacctcagGTCTTTCTCTGCATCCTGAGCCAGCTCGACTTACATCAAGATGATCCCTTTTCCTTCTTCTCCAGCAATTCCTCATTCACCTTCCACCTCAGTGGCTAAGATCATTTCTCAAAGTCCAGCCAAAGGAGCAATAATTACTGGATATGACTTAAGTAATGAAACAATCGCTGCTGAGCCATCTGGGTACTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACATGTGTGTCCACCTTGCTGCCTTGCCCCGGATGAGAGCTCAGAGGGGCTGGCTTGgggctctgggcccaggcagccctaccatgactctgctcttccccagctgagtgagcttgggcctctcttcacctctgagagcctctgcggagtaaagtggagcccactgtgcaccccacaggggcagtagtgaggcctgaagagaccatgcaGCTCCAGCTCCCCGTGAGAACCAGCATCCTCCCGGGGGCTCTGGGTTACCCTGGGCTGCAGTTAGCCAGGTGCTGGTGTGTGGTCATGAGGCTGCCTCAGCAGACAAGGCTGGAGTCCCCTCAATAACACCTAAGACCCTTCGCCAAGGGTGATGTCATCTGATTTGTAATTACGAAAGACTCCCTGTAAGCTCAACCTTTCCCAACAGCCAGCCCTGACCAAGGGGATCAGGGTGGAATCAGGGCTGGAGGAGGCTCAGCCTCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGctctgaggtcagaagcatggagtgttagggtcccagctccctccttccttgctggctggccttgggtgagctcctggacctcccagcctcagctccctcctcAGGGAGACTTTCTGCTTCACAgagcttggtcaggtgacgtatcctccctggaact s panTro4.chr1 30503399 1950 + 228333871 ctgcagagaccccctcactgcctcCAACCACATAGAGCCTTCAGCTCCCTACACGGGCCTGCTTGGGGTTTGACAAGCACTATGCGTTCCACTTCAAAATTCATAGAATCACAGCATCCAAGGCAGAGGGGCCTTTATCTCGGCTCTGACCACGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGCGTGCATGTCTTCAGCCAGCCCTGTGTGCTACCCCAGGAGAATTTTATCTCTGTCCTCTGTGTGGTTGGAGCATAGGAGGCAGAGGCGACGTGTGGCTGCGGGACCTGGGCAGGGGTCAGGGAAAGGTCTGTTGTGAGCAGGACTTTCCATATACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGCAGGTCGTCCTACGGGCATTCCAGATGGAGGGAAGGGCATTCCAGATGGAGCAGGCAGCAGGAAGAACAGCCAGGAAGTGGGGCCCAGGACACCTTTGGGAAGCAGAGAGGAGTGGCCTTTGGTAGGATCATCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCCATCAGAAAGCAGGAAGCCTCTCCAAGGGCGTGGCTTTGCACAGCTCCCCCAGTCAACAGGAGTCCAGTTATGGAACTCATTTGCATATTAAGACTCAGGTCGGTTTTGTGT-CCCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGCTGTTGGCTCCTATCTTGTTCAGGCCCCGTTCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCAACCCTGCAGCCTCCACAGAGACTCTACGGGCTGTGACCTGGGAGGCCACACATCCAGTCATGAACTGCTGGGTCTGCTGTAGGTCTTGTGATGGCCAATATTGTGGGAGAAGGGCTGATGAGGCTGGGGGTATGGAGTGTCTTGgagagagtcaagactcagggaaggtcatgggcctgccctagtcacacaggagtcagtgatggagtctctgggctggaagcccgctgccctggacccctggccgacctctctgacctcagGTCTTTCTCTGCATCCTGAGCCAGCTCGACTTACATCAAGATGATCCCTTTTCCTTCTTCTCCAGCAATTCCTCGTTCACCTTCCACCTCAGTGGCTAAGATCATTTCTCAAAGTCCAGCCAAAGGAGCAATAATTACAGGATATGACTTAAGTAATGAAACAATCGCTGCTGAGCCATCTGGGTGCTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACATGTGTGTCCACCTTGCTGCCTCGCCCCGGATGAGAGCTCAGAGGGGCTGGCTTGgggctctgggcccaggcagccctgccatgactctgctcttccccagctgagtgagcttgggcctctcttcacctctgagagcctctgcggagtaaagtggagcccactgtgcaccccacaggggcagtagtgaggcctgaagagaccgtgcaGCTCCAGCT-CCCGTGAGAACCAGTGTCCTCCCGGGGGCCCTGGGTTACACTGGGCTGCAGTTAGCCAGGTGCTGGTGTGTGGTCATGAGGCTGCCTCAGCAGACAAGGCTGGAGTCCCCTCAATAACACCTAAGACCCTTCGCCAAGGGTGATGTCATCTGATTTGTAATTATGAAAGACTCCCTGTAAGCTCAACCTTTCCCAACAGCCAGCCCTGACCAAGGGGATCAGGGTGGAATCAGGGCTGGAGGAGGCTCAGCCTCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGctctgaggtcagaagcatggagtgttagggtcccagctccctccttccttgctggctggccttgggtgagctcctggacctcccagcctcagttccctcctcAGGGAGACTTTCTGCTTCACCgagcttggtcaggtgacgtaacctctctggaact i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30092581 1923 - 229942017 ctgcagagacccccccactgcctcCAACCACATAGAGGCTTCAGCTCCCCACATGGGCCTGCTTGGGGTTTGACAAGCACCAAACGTTCCACTTCAAAATTCATAGAGTCACAGCATCCAAGGCACAGGGGCCTTTATCTCAGCTCTGACCGTGAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTGTGTGCTACCCCAGGAGAATGTTATCTCTGTCCTCTGTGTGGTTGGAGCATAGGAGGCAGAGGCGACGTGTGGCTGCGGGACCTGGGCAG------GGGAAAAGTCTCTTGTGAGCAGGACTTTCCATGCACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGTAGGTCATCA----------------GGAGGGAAGGGCATTCCAGATGGAGGAGGCAGCAGGAAGAACAGCCAGGAAGTGGGACCCAGGACACCTTTGGGAAGCAGAGAGGAGTGGCCTTTGGTGGGATCATCAAGGGAAGATGTGTCTGGAAGTGCAGAGAGTGACTCCGTCAGAAAGCAGGAAGCCTCTCCAAGGGCGTGGCTTTGCACAGCTCCCCCAGCCAATGGGAGTCCAGTTATGGAACTCATTTGCATATTAAGACTCAGGTAGGTTTTGTGTCCCCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGC---TGGCTCCTATTTTGTTCAGGCCCTGTCCTGTCTTCTAAGCTCTGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCACCCCTGCAGCCTCCACAGAGACTCTACGGGCTGGGACCTGGGAGGCCACACATCCAGTCATGAACGGCTGGGTCTGCTCTAGGTCTTGTGATGGCCAATATTGTGGGAGAAGGGCTGATGAGGTGGGGGGTATGGAGTGTCTTGGAGAGAGTCAAGACTCAGGGAGGGTCATGGGCCTGCCCCAGTCACACAGGAGTCAGTAATGGAGTCTCTGGGCTGGAAGCCCACTGCCCTGGACCCCTGGCCGACCTCCCTGACCTCAGGTCTTTCTCTGCATCCTGAGCCAGCTCAACTTACATCAAGATGATCCTTTTTCTTTCTTCTCCAGCAATTCCTCGTTCACCTTCCACCCCAGTGGCTAAGATCATTTCTCAATGTCCAGCCAAAGGAGCAATAATTACTGGATATGACTCAAGTAATGAAACAATCGCTGCtgagccatctgggtgctggaaagctggaagcagcaggcatggctgcagacatgtgtgtccaccttgctgccttgccccggatgagAGCTCAGAGGGGCTGGCTTGGGGCTCTGGGCCCAGGCAGCCCGGCCGTGACTC--CTCTTCCCCAGCTGAGTGAGCTTGGGCCTCTCTTCACCTCTGAGAGCCTCTGCGGAGTAAAGTGGGGCCCACTGTGCACCCCACAGGGGCAGTAGTGAGGCCTGAAGACACCGTGCAGCTCCAGCTCCCCGTGCAAACCAGCGTCCTCCCGGGGGCCCTGGGTTA--CTGGGCTGCAGTTAGCCAGGTGCTGGTGTGTAGTCATGAGGCTGCCTCAGCAGACAAGGCTGGAGTCCCCTCAATAACACCCAAGACCCTTTGCCAAGGGTGATGTCATCTGATTTGTAATTACGAAAGACTCCCTGTAAGCTCATCCTTTCCCAACAGCCAGCCCTGACCAAGGGGATCAGGGTGGAATCAGGGCTGGAGGAGGCTCAGCCCCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGctctgaggtcagaagcatggagtgttagggtcccagctcccgccttccttgctggctggccttgggtgagctcctggacctcccagcctcagctccctcctcAGGGAGactttctgcttcacggagcttggtcaggtgacgtaacctcactggaact i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33387496 1931 + 229590362 ctgcagagaccccctcactgcctcCAACCACATAGAGGCTTCAGCT-CCCACCCGGACCTGCTTGGGGTTTGACAAGCACCATGCATTCCACTTCAAAATTCATAGAATCACAGCATCCAAGGCACAGGGGCCTTTATCTCAGCTCTGACCGTCAGCCTGCTGTGGCAGGGCGCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTATGTGCTACCCCAGGAGAATTTCATCTCTGCCCTCTGTGTGGTTGGAGCAGAGGAGGCAGAGATGACGTGTGGCTGTGGGACCTGGGCAGGGGTCAGGGAAAGGTCCCTTGGGAGCAGGGTTTTCCATGTACATGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGTAGGCCGTCA----------------GGAGGGAAGGGCATTCAAGATGGAGGAGGCAGCAGGAAGAACAGCCAGGAAGTGGGGCCCAGGGCACCTTTGGGAAGCAGAGATGAGTGGCCTTTGGTAGGATCAGCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCTATCAGAAAGTAAGAAGCCTCTCCAAGAGCATGGCTTTGCACAGCTCCTCCAGCCAACGGGAGTCCAGTTATGGAACTCATTTGCATATTAAGACTCAGGTCAGTTTTGTGT-CTCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGC---TGGCTCCTATCTTGTTCAGGCCCTGTCCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCACCCCTGCGGCCTCCACAGAGACTCTGCGGGCTGGGACCTGGGAGACCACACATCCAGTCATGGATGGCTGGGTCTGCTCTAGGTCTTGTGATGGCCAATACTGTGGGAGAAGGGGTCATGAGGCTGGGGGTGTGGAGTGTCTTGgagagagccaagactcagggagggccatgggcctgccccagtcacacaggagtcagtgatggagtctctgggctggaagcccactgccctggacccctagctgacctctctgACCTCGGGTCTTTCTCTGTATCCCGAGCCACCTCAGCTTATATCAAGCTGATCTTGTTTCCCTCTTTTCCAGCAATTTCTCGTTCACCTTCCACCCCAGTGGCTGAGATCATTTCTCAATGACTAGCCAAAGGAGTAATAATTACTGGATGTGACTTAAGTAATGAAACAATCGCTGCTGAGCCATCTGGGTGCTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACAGGCATGTCTACCTCACTGCCTTGCCCAGGATGAGAGCTCAGAGGGGCTGGCTTGgggctctgggcctaggcagccctgccttgactctgctcttccacagctgagtgagcttgggcctctcttcacctctgagagcctccgcagagtaaagtggagaccactgtgcaccccacaggggcggtagtgagacctgaagacaccatgcaGCTCCAGCTCCCCGTGTGAACCAGCATCCTCCCAGGGGCCCTGGGTTACACTGGGCTGCAGCTACCCAGGTGCTGGTATGTGGTCATGAGGCTGCCTCAGCAGACAACGCTGGAGTCCCCTCAACAGCACCCAAGACCCTTCACCAAGAGTGATGTCATCTGATTTGTAATTATGGAAGACTGCCTGTAAGCTCAGCCTTGCCCAACAGCCGACCCTGACCAAGGGAATCAGGGTGGAATCAGGGCTGCAGGAGGTTCAGCCCCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGCTCtggggtcaggaggatggagtgttagggtcccaactccctcctccctggctggctggccttgggtgagctcctggacctcccagcctcagctccctccttagggagactttctgcttcacagagcttggtcaggtgacctaacctctctggaact i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29898731 1931 - 227556264 ctgcagagaccccctcactgcctcCAACCACATAGAGGCTTCAGCT-CCCACCCGGGCCTGCTTGGGGTTTGACAAGCACCATGCATTCCACTTCAAAATTCATAGAATCACAGCATCCAAGGCACAGGGGCCTTTATCTCAGCTCTGACCGTCAGCCTGCTGTGGCAGGGCGCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTATGTGCTACCCCAGGAGAATTTCATCTCTGCCCTCTGTGTGGTTGGAGCAGAGGAGGCAGAGATGACGTGTGGCTGTGGGACCTGGGCAGGGGTCAGGGAAAGGTCCCTTGGGAGCAGGGCTTTCCATGTACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGTAGGCCGTCA----------------GGAGGGAAGGGCATTCAAGATGGAGGAGGCAGCAGGAAGAACAGCCAGGAAGTGCGGCCCAGGGCACCTTTGGGAAGCAGAGATGAGTGGCCTTTGGTAGGATCAGCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCTATCAGAAAGTAAGAAGCCTCTCCAAGAGCATGGCTTTGCACAGCTCCTCCAGCCAACGGGAGTCCAGTTATGGAACTCATTTGCATATTAAGACTCAGGTCAGTTTTGTGT-CTCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGC---TGGCTCCTATCTTGTTCAGGCCCTGTCCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCACCCCTGCGGCCTCCACAGAGACTCTGCGGGCTGGGACCTGGGAGACCACACATCCAGTCATGGATGGCTGGGTCTGCTCTAGGTCTTGTGATGGCCAATACTGTGGGAGAAGGGGTCATGAGGCTGGGGGTGTGGAGTGTCTTGGAGAGAGCCAAGACTCAGGGAGGGCCATGGGCCTGCCCCAGTCACACAGGAGTCAGTGATGGAGTCTCTGGGCTGGAAGCCCACTGCCCTGGACCCCTAGCTGACCTCTCTGACCTCGGGTCTTTCTCTGTATCCCGAGCCACCTCAGCTTATATCAAGCTGATCTTGTTTCCCTCTTTTCCAGCAATTTCTCGTTCACCTTCCACCCCAGTGGCTGAGATCATTTCTCAATGACTAGCCAAAGGAGTAATAATTACTGGATGTGACTTAAGTAATGAAACAATCGCTGCTGAGCCATCTGGGTGCTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACAGGCATGTCTACCTCACTGCCTTGCCCAGGATGAGAGCTCAGAGGGGCTGGCTTGgggctctgggcctaggcagccctgccttgactctgctcttccacagctgagtgagcttgggcctctcttcacctctgagagcctccgcagagtaaagtggagaccactgtgcaccccacaggggcggtagtgagacctgaagacaccatgcaGCTCCAGCTCCCCGTGTGAACCAGCATCCTCCCAGGGGCCCTGGGTTACACTGGGCTGCAGCTACCCAGGTGCTGGTATGTGGTCATGAGGCTGCCTCAGCAGACAACGCTGGAGTCCCCTCAACAGCACCCAAGACCCTTCACCAAGAGTGATGTCATCTGATTTGTAATTATGAAAGACTGCCTGTAAGCTCAGCCTTGCCCAACAGCCGACCCTGACCAAGGGAATCAGGGTGGAATCAGGGCTGCAGGAGGTTCAGCCCCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGCTCtggggtcaggaggatggagtgttagggtcccaactccctcctccctggctggctggccttgggtgagctcctggacctcccagcctcagctccctccttagggagactttctgcttcacagagcttggtcaggtgacctaacctctctggaact i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32662130 1931 + 220367699 CTGCAGAGACCCCCTCACTACTTCCAACCACATAGAGGCTTCAGCT-CCCACCCGGGCCTGCTTGGGGTTTGACAAGCATCATGCGTTCCACTTCAAAATTCATAGAATCACAGCATCCAAGGCACAGGGGCCTTTATCTCGGCTCTGACCATCAGCCTGCTGTGGCAGGGCCCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTGCGTGCTACCCCAGGAGAATTTCATCTCTGCCTTCCGTGTGGTTGGAGCAGAGGAGGCAGAGATGACGTGTGGCTGTGGGACCTGGGCAGGGGTCAGGGAAAGGTCTCTTGGGAGCAGGGCTTTCCATGTACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGTAGGCCGTCA----------------GGAGGGAAGGGCATTCAAGATGGAGGAGGAAGTAAGAAGAATAGCCAGGAAGTGGGGCCCAGGGCACCTTTGGGAAGCAGAGATGAGTGGCCTTTGGTAGGATCAGCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCTATCAGAAAGTAAGAAGCCTCTCCAAGAGCATGGCTTTGCACAGCTCCTCCAGCCAACGGGAGTCCAGTTATGGAactcatttgcatattaaaactCAGGTCGATTTTgtgt-ctcccacctcagccctgcaaGCCCAAGTTCAATAGC---TGGCTCCTATCTTGTTCAGGCCCTGTCCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCACCCCTGCGGCCTCCACAGAGACTCTGCGGGCTGGGACCTGGGAGACCACACATCCAGTCATGGACGGCTGGGTCTGCTCTAGGTCTTGTGATGGCCAATACCATGGGAGGAGGGGTCATGAGGCTGGGGGTGTGGAGTGTCTTGGAGAGAGCCAAGACTCAGGGAGGGCCATGGGCCTGCCCCAGTCACACAGGAGTCAGTGATGGAGTCTCTGGGCTGGAAGCCCACTGCCCTGGACCCCTAGCCGACCTCTCTGATCTCGGGTCTTTCTCTGTATCCCGAGCCACCTCAGCTTATATCAAGCTGACCTTGTTTCCCTCTTTTCCAGCAATTTCTCGTTCACCTTCCGCCCCAGTGGCTGAGATCATTTCTCAATGACTAGCCAAAGGAGTAATAATTACTGGATGTGACTTAAGTAATGAAACAATCGCTGCTGAGCCATCTGGGTGCTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACAGGCATGTCTACCTCACTGCCTTGCCCAGGATGAGAGCTCAGAGGGGCTGGCTTGGGGCTCTGGGCCTAGGCAGCCCTGCCTTAACTCTGCTCTTCCACAGCTGAGTGAGTTTGGGCCTCTCTTCACCTCTGAGAGCCTCCACAGAGTAAAGTGGAGACCACTGTGCACCCCACAGGGGCGGTAGTGAGACCTGAAGACACCATGCAGCTCCAGCTCCCCGTGTGAACCAGCATCCTCCCAGGGGCCCTGGGTTACAGTGGGCTGCAGCTACCCAGGTGCTGGTATGTGGTCATGAGGCTGCCTCAGCAGACAAGGCTGGAGTCCCCTCAACAGCACCCAAGACCCTTCACCAAGAGTGATGTCATCTGATTTGTAATTATGAAAGACTGCCTGTAAGCTCAGCCTTGCCCAACAGCCGACCCTGACCAAGGGAATCAGGGTGGAATCAGGGCTGCAGGAGGTTCAGCCCCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGCTCTGGGGTCAGGAGGATGGAGTGTTAGGGTCCCAACTCCCTCCTCCCTGGCTAGCTGGCCTTGGGTGAGCTCCtggacctcccagcctcagctCCCTCCTTAGGGAGACTTTCTGCTTCACAGAGCTTGGTCAGGTGACCTAACCTCTCTGGAACT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28178640 1926 - 130588469 ctgcagagaccccctcactgcctcCAACCACATAGAGGCTTCAGCTCCCCACCCGGGCCTGCTTGGGGTTTGACAAGCACCATGCATTCCACTTTAAAATTCATAGAATCACAGCATCCAAGGCACAGGGGCCTTTATCTCGGCTCTGACCATCAGCCTGCTGTGGCAGGGCGCGGTTTGTGGGCGTGCATGTCTGCAGCCAGCCCTGTGTGCTACCCCAGGAGAATTTCATCTCTGCCTTCTGTGTGGTTGGAGCAGAGGAGGCAGAGATGACGTGTGGCTGTGGGACCTGGGCAGGGGTCAGGGAAAGGTCTCTTGGGAGCAGGGCTTTCCATGTACGTGGTGTTTCAACAGACAGCAGTGTGGGGACATGGGTCGTAGGCCGTCA----------------GGATGGAAGAGCATTCAAGATGGAGGAGGAAGCAGGAAGAATAGCCAGAAAGTGGGGCCCAGGGCACCTTTGGGAAGCAGAGATGAGTGTCCTTTGGTAGGATCAGCAAGGGAAGATGTGGCTGGAAGTGCAGGGAGTGACTCTATCAGAAAGTAAGAAGCTTCTCCAAGAGCATGGCTTTGCACAGCTCCCCCAGCCAACAGGAGTCCAGTTATGGAACTCATTTACATATTAAGACTCAGGTCGGTTTTGTGT-CCCCCACCTCAGCCCTGCAAGCCCAAGTTCAATAGC---TGGCTCCTATATTGTTCAGGCCCTGTTCTGTCTTCTAAGCTCCGCATCTGCCTGTCCAGGGACCTCAGCCCAAATCTCCCACCTCATAGCCTGGAGCCACCCCGGCGGCCTCCACAGAGACTCTGCGGGCTGGGACCTGGGAGACCACACATCCAGTCATGAACGGCTGGGTCTGCTTTAGGTCTTGTGATGGCTAATACTGTGGGAGAAGGGGTCATGAGGCTGGGGGTGTGGAGTGTCTTGGAGAGATCCAAGACTCAGGGAGGGCCATGGGCCTGCCCCAGTCACACAGGAGTCAGTGATGGAGTCTCTGGGCTGGAAGTCCACTGCCCTGGACCCCTGGCCGACCTCTCTGACCTCGGGTCTTTCTCTGTATCCTGAGCCACCTCAGCTTATATCAAGCTGATCTTGTTTCCCTCTTTTCCAGCAATTTCTCGTTCACCTTCCACCCCAGTGGCTGAGATCATTTCTCAATGACTAGCCAAAGGAGTAATAATTACTGGATGTGACTTACGTAATGAAACAATTGCTGCTGAGCCATCTGGGTGCTGGAGAGCTGGGAGCAGCAGGCATGGCTGCAGACAGGCATGTCTACCTCACTGCTTTGCCcaggatgagagctcagaggggctggcttggggctctggggccaggcagctctgccttgactctgcccttatgcagctgagtgagcttgggcctctcttcacctctgagagcctccgcagagtaaagtggagactactgtgcaccccacaggggcggtcgtgagacctgaagacaccatgcaGCTCCAGCTCCCCGTGTGAACCAGCATCCTCCCAGGGGCCCTGGGTTACACTGGGCTGGAGCTACCCAAGTGCTGGTATGTGGTCATGAGGCTGCCTCAGCAGACAAGGCTGGAGTCCCCTCAACAGCACCCAAGACCCTTCACCAAGAGTGATGTCATCTGATTTGTAATTATGAAAGACTGCCTGTAAGCTCAGCCTTGCCCAACAGCC------AACCAAGGGAATCAGGGTGGAATCAGGGCTGCAGGAGGCTCAGCCCCTACTGGATGAGGTGGGGGTTGGGCCTGGATTCAAAACTGCAGCTCtggggtcaggaggatggagtgttagggtcccaactccctcctccctggctggccggccttgggtgagctcctggacctcccagcctcagctccctccttagggagactttctgcttcacagagcttggtcaggtgacctaacctctctggaact i chlSab2.chr20 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 545442 9118 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I e calJac3.chr7 64637016 0 + 155834243 C a score=1317504.000000 s hg38.chr1_KI270760v1_alt 68822 632 + 109528 cagttgcctcatctctaaaatgggctttgcaccttcctgccctgtggggtgggaggactggatgagatggtgtgggtgaggggttgtgccatgcctgacaccctctatttgatcctcactcagtggtatctGTGGTGACAGGATCTGGGACTTCCCTCAGCCTAGCAGAGGGTTCAGAGTGAGCGAGGCCACGCTTATGTTTATTGGGGTGAAAGCTGCATTAATAAGCTGGCAAAAAGGGAAAGCATTG-GGGAGAGTTGGCAAGGACAGTGCCTGGGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACACTTGAGTTTTCTGTCTCCCATTTGGCCCTTGGCTCTCAGTGGGATCTGCTGTCATTTCTG--TAGATATAACAATAACAATAATTGCAATAGCCTCAATCCTTG-AATCCTTCCTCTCAGCCGAGCTTTGCCC-CACAGAGTG------------------CCCCAAAGGAGG-----CAACAGAAggacctgtgggcagaaagtccagtcccacctctgcctcctactccagccttgggctgatccttccctgccctgggcctcagtttccca-catgccaaatatgggtgttgaatt----------------tgacacttggagg----------------cactttgagctgttaaattct s panTro4.chr1 30505349 632 + 228333871 cagttgcctcatctctaaaatgggctttgcaccttcctgccctgtggggtgggaggactggatgagatggtgtgggtgaggggttgcaccatgcctgacacCTTCTATTTGATCCTCACTCAGTGGTATCTGTGGTGACAGGATCTGGGACTTCCCTCAGCCTAGCAGAGGGTTCAGAGTGAGCGAGGCCACGCTTATGTTTATAGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAAAGCACTG-GGGAGAGTTGGCAAGGACAGTGCCTGGGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACACTTGAGTTTCTTGTCTCCCATTTGGCCCTTGGCTCTCAGTGGGATCTGCTGTCATTTCTG--TAGATATAACAATAACAATAATTGCAATAGCCTCAATCCTTG-AATCCTTCCTCTCAGCCGAGCTTTGCCC-CACAGAGTG------------------CCCCAAAGGAGG-----CAACAGAAGGACCTGTGGGCAGAAAGtccagtcccacctctgccccctactccagccttgggctgatccttccctgccctgggcgtcagtttccca-catgccaaatatgggtgttgaatt----------------tgacacttggagg----------------cactttgagctgttaaattct i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30094504 647 - 229942017 cagttgcctcatctctaaaatgggctttgcgccttcctgccctgtggggtgggaggacggggtgagatggtgtgcgtgaggggttgtgccatgcctgacacCTTCTATTTGATCCTCACTTAATGGTATCCGTGGAGACAGGATCTGGGATTTCCCTCAGCCTAGCAGAGCGTTGAGAGTGAGCGAGGCCACGCTTATGTTTATTGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAAAGCATT--GGGAGAGCTGGCAAAGACAGTGCCTGGGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACACTTGAGTTTCTTGTCTCCCATTTGGCCTTTGGCTCTCAGTGGGATCTGCTGTCATTTTTG--TAGATATAGCAATAACAATAATTACAATAGCCTCAATCTTTG-AATCCTTCCTCTCAGCCGAGCTTTGCCC-CACAGAGTG------------------CCCCAAAGGAGG-----CAAcagaaggacctgtgggcagaaagtccagtcccacctctgcctcctactccagccttgggctgatccttccctgccctgggcctcagtttccca-catgcaaaatatgggtgttgaatt----------------tgaCACTTGGAGGCATGGACGCTTGGAGTCACTTTGAGCTGTTAAATTCT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 554560 655 - 28733288 cagtcacctcacctttaaaatgggctttatgccctcctgttccatgaggtgtgagga-tggacaagatggtgctagtgaggggctgcaccattcctggcacCTTCTCTTCAATGCTTGTTCAATGGTAATTGTGGTGACAGGACCTGGGACTTCCCCCAGTCT-GCAGAGGGTTCACAGTGGCCGAGGCTGCACCCATGTTTGTTGGGGTGGAAACTGC-TTAATAAGCTGGCATTAAGGAAGCACATCACGAGAAGGCAGG--AGGACAATGCCTGGGTAGAAATCTCTCTCCCCACTCAGGGAGCGGCTGCCCTGAGCCCCTCACACTTGGGCTCCTTTTCTC--------CCCTTGGCTCTTGGTGGGATCCACTGTCACTTCTGCACAGGGATAACAGTAACAATAA---CGATAATCCCAATCCTCGAAATCTGTCCTCTCGGCAGAGCTTTGCCTGCACCAGCTGTCGCTCCGTCCCCACCTCCCCCGAGAGAGGGCTGCTAACGGCAGAGTCTTTGGGCAGGACGTCCAAcaccaacacactgtgtgactc------tggacaggtccgttcccattctggccctcaatttccccttctgtacaacacaggtgttgaact----------------acatactcctagggtTAGGAAGAGTCAGTCCATTTGAGCCATTAAGTTCT i nomLeu3.chr24 I 9118 I 1331 s rheMac3.chr1 33389427 631 + 229590362 cagttgtttcatctctaaaatgggctttgcgccttcctgccctgtggggtgggaggactgaatgagatggtgtgggtgaggggttgtgccatgcctggcacCTTCTCGTTGATCCTCACTCTATGGTATTTGTGGTGACAGGATCTGGGACTTCCCTCAGCCTAGCAGAGGGTTCAGAATGACCGAGGCCACGCCTGTGTGTATTGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAGAGCATTG-GGCAGAGTTGGCGAGGACAGTGCCTGGGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACGCTTGATTTTCTTGTCTCCCATTTGACCCTTGGCTCTCGGTGGGATCTGCTGTCATTTCTG--CAGGTATAACAATAACAATAATTACAATAGCCTCAATCCTCG-AATCCTTCCTCTCAGCTGAGCTTTGCCC-CACAGAGTG------------------CCCCAAA-GAGG-----CAACAGAAGACCCTGTGGGCAGAAAGtccagtcccacctctgcctcctagtccagccttgcgctgatccttccctgccttgggcctccgtttccca-catgcaaaatgtgggtgttgaatt----------------ggacacttggagg----------------cactttgagctgttaaattct i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29900662 631 - 227556264 cagttgtttcatctctaaaatgggctttgcgccttcctgccctgtggggtgggaggactgaatgagatggtgtgggtgaggggttgtgccatgcctgacacCTTCTCGTTGATCCTCACTCTATGGTATTTGTGGTGACAGGATCTGGGACTTCCCTCAGCCTAGCAGAGGGTTCAGAATGACCGAGGCCACGCCTGTGTGTATTGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAGAGCATTG-GGCAGAGTTGGCGAGGACAGTGCCTGAGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACGCTTGATTTTCTTGTCTCCCATTTGACCCTTGGCTCTCGGTGGGATCTGCTGTCATTTCTG--CAGGTATAACAATAACAATAATTACAATAGCCTCAATCCTCG-AATCCTTCCTCTCAGCTGAGCTTTGCCC-CACAGAGTG------------------CCCCAAA-GAGG-----CAACAGAAGACCCTGTGGGCAGAAAGtccagtcccacctctgcctcctagtccagccttgcgctgatccttccctgccttgggcctccgtttccca-catgcaaaatgtgggtgttgaatt----------------ggacacttggagg----------------cactttgagctgttaaattct i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32664061 631 + 220367699 CAGTtgtttcatctctaaaatgggctTTGCGCCTTCCTGCCctgtggggtgggaggactgGATGAGATGGTGTAGATGAGGGGTTGTGCCATGCCTGACACCTTCTCATTGATCCTCACTCTATGGTATTTGTGGTGACAGGATCTGGGACTTCCCTCAGCCTAGCAGAGGGTTCAGAATGACCGAGGCCATACCTGTGTGTATTGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAGATCATTG-GGCAGAGTTGGCGAGGACAGTGCCTGGGCAGGAGTCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACGCTTGATTTTCTTGTCTCCCGTTTGACCCTTGGCTCTCGGTGGGATCTGCTGTCATTTCTG--CAGgtataacaataacaataattacAATAGCCTCAATCCTCG-AATCCTTCCTCTCAGCTGAGCTTTGCCC-CACAGAGTG------------------CCCCAAA-GAGG-----CAACAGAAGACCCTGTGGGCAGAAAGTCcagtcccacctctgcctcctagtcCAGCCTTGCGCTGATCCTTCTCTGCCCGGGGCCTCCATTTCCCA-CATGCAAAATGTGGGTGTTGAATT----------------GGACACTTGGAGG----------------CACTTTGAGCTGTTAAATTCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28180566 647 - 130588469 cagttgtttcatctctaaaatgggctttgcgccttcctgccctgtggggtgagaggactggatgagatggtgtgggtgaggggttgtgccatgcctgacacCTTCTCTTTCATCCTCACTCAATGGTAGTTGTGGTGACAGGATCTGGGACTTCCCTCAGCCTGGCAGAGGGTTCAGAATGACCGAGGCCACACCTGTGTGTATTGGGGTGAAAACTGCATTAATAAGCTGGCAAAAAGGGAGAGCATTG-GGCAGAGTTGGCGAGGACAGTGCCTGGGCAGGAATCACTCTCTCCTCTTGGGGAGCAGCTCCTCTGAGCCCCCTACGCTTGATTTTCTTGTCTCTCATTTGACCCTTGGCTCTCGGTGGGATCTGCTGTCATTTCTG--CAGGTCTAACAATAACAATAATTACAATAGCCTCAATCCTCG-AATCCTTCCTCTCAGCTGAGCTTTGCCC-CAcagagtg------------------ccccaag-gagg-----cagcagaaggaccggtgggcagaaagtccagtcccacctctgcctcctagtccagccttgtgctgatccttccctgccttgggtctcagtttccca-catgtaaaatgtgggtgttgaatttgaCACTTGGAGGCACAGACACTTGGAGG----------------CACTTTGAGCTATTAAATTCT i chlSab2.chr20 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e canFam3.chr2 15009876 580 - 85426708 I e calJac3.chr7 64637016 0 + 155834243 C a score=486404.000000 s hg38.chr1_KI270760v1_alt 69454 265 + 109528 aCCGGATGTTCAAAGACTGTGGGGAAGATGGGGAGCAGGAGGGGACAGGGGCCACACTCGAGCCTCGGTTCacagtggttgagtggtcacagtatgccaggcactgtcctgagtgctccatgtggatcaacctagtgggtccccacatcatcaactggaggaggggggcacgattattattcccattttataattgaggaaactgaggcacagagcagtttgtcatggccagagcgctgctctgggagacagggacagatccaga s panTro4.chr1 30505981 265 + 228333871 aCCGGATGTTCAAAGACTGTGGGGAAGATGGGGAGCAGGAGGGGACAGGGGCCACACTCGAGCCTCGGTTCacagtggttgagtggtcacagtatgctgggcactgtcctgagtgctccatgtggatcaacctagtgggtccccacatcatcaactggaggaggggggcacgattattattcccattttataattgaggaaactgaggcacagagcagtttgtcatggccagagcgctgctctgggagacagggacagatccaga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30095151 265 - 229942017 ACCGGACGTTCAAAGACTGTGGGGAAGATGGGGAGCAGGAGGGGACAGAGGCCACACTCGAGCCTCGGTTCATAGTGGttgagtagtcacaatatgccaggcactgtcctgagtgctccatgtggatcaacctagtgggtccccacatcatcaactggaggaggggggcacgattattattcccattttataattgaagaaactgaggcgcagagcagtttgtcatggccagagcgctgttctgggagacagggacagatccaga i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33390058 264 + 229590362 aCTGGATGTTCAAAGACTGTGGGGAAGACGGAGAGCAGGAGGGGACAGAGGCCACACTCGAGCCTCAGTTCacagtggttgagtggtcacaatatgccaggcactgtcctgagtgcgtcacgtgaatcaacctagtgagtccccacatcatcaactggagga-gaggccacgattattattcccattttataactgaggaaactgaggcgcagagcagtatgccatggccagagcgctgctctgggagacagggacagatccaga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29901293 264 - 227556264 aCTGGATGTTCAAAGACTGTGGGGAAGACGGAGAGCAGGAGGGGACAGAGGCCACACTCGAGCCTCGGTTCacagtggttgagtggtcacaatataccaggcactgtcctgagtgcgccacgtgaatcaacctagtgagtccccacatcatcaactggagga-ggggccacgattattattcccattttataactgaggaaactgaggcgcagagcagtatgccatggccagagcgctgctctgggagacagggacagatccaga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32664692 263 + 220367699 ACTGGATGTTCAAAGACTGTGGGGAAGACGGAGAGCAGGAGGGGACAGAGGCCACACTCGAGCCTCGGTTCACAGTGGTTGAGTGGTCacaatatgccaggcactgtcctgagTGCGCCACGTGAATCAACCTAGTGAGTCCCCACATCATCAACTGGAGGA-GGGGGCAcgattattattccca-tttataactgaggaaactgaggcgcagAGCAGTATGTCATGGCCAGAGCGCTGCTCTGGGAGACAGGGACAGATCCAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28181213 264 - 130588469 ACCGGATGTTCAAAGACTGTAGGAAAGACGGAGAGCAGGAGGGGACAGAGGCCACACTGGAGCCTCGGTTCacagtggttgagtggtcacaatatgccaggcactgtcctgagtgctccacatgaatccacctagtgggtccccacatcatcaactggagga-ggggacacgattattattcccattttataactgaggaaactgaggcacagagcagtatgtcatggccagagcgctgctctgggagacagggacagatccaga i chlSab2.chr20 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I e calJac3.chr7 64637016 0 + 155834243 C a score=1976534.000000 s hg38.chr1_KI270760v1_alt 69719 877 + 109528 ccccttgacttcCTGGGTCACCTGAGGGAAGGAGCTTC-CCTTCTTATCTTCCAGGAAGGAGGTAGCAGAACAGGAACCAAAGTGAGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCCAGGAGCCCCCGTATGTGAGGTTGCatcctcaggacctctcctggagtaggtattgttctctccattttacagacaaggaaactgctacctagaaaggttt--agacttaactaacatcacaccgcaagtgtgtggcagggccagattcaaacacagg---ctctgAATCTTTCCACCCCTCACAGGCTACTTCAGGGCCGGGCACCCCCGCGT------------AGTTGGGGCAGAGATTGGAGGATAGATCTGGCCGGTGGCTATGGGTTCTTAGGCCCACAGGCAAATAAGAGGCTCCAGAAAGCTGGGTATTGGGGGTGGCCTCAGGAGCCCTGTGACTGTGGTCAGGAAAGGAGAACCCAGGACTGGGCAGCAAGAAGA-TAAGGCAGACACGAGGTTCTGGAGAGTCGGCTCACGGCTGGGGAGGATGTAGGGGCCTGGC--CAGAGTGGGCTCAGGAGTAGGGGCTGAATCCTGTGAGGTGGGTCAACAGAATGAGGAAGGTCCCCATACCTGGAGGAGGTGAGGTCAGG----GGCCCACAGGCAGAAACAGCTAAGTCCaggctcctgaccatcctccagcttccacgtggacctgccctccccagtcatgggcctcccagaggcctgaggaaacctgtaaacaggtaaagcacatcccattcctctcagctcccagccctccccagcttccggtcttactcaaaggaaaatccaaatctgctggcatggcccacaagcccctcccatgtctgtcccctctgaccttgtccccctt s panTro4.chr1 30506246 877 + 228333871 ccccttgacttcCTGGGTCACCTGAGGGAAGGAGCTTC-CCTTCTTATCTTCCAGGAAGGAGGTAGCAGAACAGGAACCAAAGTGAGTGCAAAGTCTTCTGGGGGCCAGGAGCTGCCAGGAGCCCCCGTATGTGAGGTTGCatcctcaggacctctcctggagtaggtattgttctctccattttacagatgaggaaactgctacctagaaaggttt--agacttaactaacatcacaccgcaagtgtgtggcagggccagattcaaacacagg---ctctgaatctctccaCCCCTCACAGGCTACTTCAGGGCCGGGCACCCCCACGT------------AGTTGGGGCAGAGATTGGAGGATAGATCTGGCCGGTGGCTATGGGTTCTTAGGCCCACAGGCAAATAAGAGGCTCCAGAAAGCTGGGTATCGGGGGTGGCCTCAGGAGCCCTGTGACTGTGGTCAGGAAAGGAGAACCCAGGACTGGGCAGCAAGAAGA-CAAGGCAGACACGAGGCTCTGGAGAGTCGGCTCACGGCTGGGGAGGATGCAGGGGCCTGGC--CAGAGTGGGCTTAGGAGTAGGGGCTGAATCCTGTGAGGTGGGTCAACAGAATGAGGAAGGTCCCCAGACCTGGAGGAGGCGAGGTCAGG----GGCCCACAGGCAGAAACAGCTAAGTCCaggctcccgaccagcctccagcttccatgtggacccgccctccccagtcatgggcctcccagaggcctgaggaaacctgtaaacagataaagcacatcccattccgctcagctcccagccctccacagcttccggtcttactcaaaggaaaatccaaatctgctggcacagcccacaagcccctcccatgtctgtcccctctgaccttgtcgccctc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30095416 873 - 229942017 ccccttgacttcctgGGTCACCTTAGGGAAGGAGCTTC-CCTTCTTATCTTTCAGGAAGGAGGTAGCAGAACAGGAACCGAAGTGAGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCCAGGAGCCCCCGTATGTGAGGTTGCatcctcaggacctctccgggagtaggtattgttctctccattttaccgacaaggaaactgctacctagaaaggtttagagacttgactaacagcacaccacaggtgtgtggcagggccggattcaaacacagg---ctctgaatctctccaCCCCTCACAGGCTACTTCAGGGCCGGGCACCCCCACGT------------AGTTGGGGCAGAGGTTGGAGGATAGATCTGGCCAGTGGCTATGGGTTCTCAGGCCCACAGGCAAATAAGAGGCTCCAGAAAGCTGGGTATTAGGGGTGGCCTCAGGAGCCCTGTGACTGTGGTCAGGAAAGGAGAACCCCGGACTGGGCAGCAAGAAGA-CAGGGCAGACATGAGGCTCTGGAGAGTTGGCTCACGGCTGGGGAGGATGCAGGGGCCTGGC--CAGGATGGGCCTAGGA------GCTGAATCCTGTGAGGTGGGTCAACAGAATGAGGAAGGTCCCCAGACCTGGAGGAGGCGAGGTCAGG----GGCCCACAGGCAGAAACAGCTAAGTCCaggctcccgaccagcctccagcttccacgtggacccgccctccccagtcatgggcctcccagaggccagaggaaacctgtaaacaggtaaagcacatcccatgccactcagctcccagccctccacagcttccggtcttactcaaaggaaaatccaaatctgctggcacagcccacaagcccctcccatgtctgtcccctctgaccttgtccccctc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33390322 881 + 229590362 ccccttgacttcctgGGTCACCTTAGGGAAGGAGCTTCACTTTCTCATCTTCCAGGAAGGACGTAGCAGAAGAGGAACCGAAGTGTGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCTAGGAGCCCTGGTATGTGAGGTTGCatcctcaggacctccactggagtaggtattattctctccaatttacagacaaggaaactgctacctagaaaggtttagagacttgactaacgtcacatcgcaagtgtgtggcagggccggattcaaacacagg---ctctgaatctctccaCCCATCGCAGGCTGCTTCAGGGCCGGGCACGCCTGCAT------------AGCTGGGGTAGAGGTTGGAGGATAGATCTGGCCGGTGGCTATGGGTTCTCAGGCCCACAGGCAAATAAGAGGCTCCCGAAAGCTGGGTATCAGGGGTGGCCTCAGGAGCCTTGTGACTGTGGTCAGGAAGGGAGAGCCCAGGACTGGGCAGCAAGAAGA-CAGGGCAGACACGAGACTCCGGAGAGTGGGCTCACGACTGGGGAGGATGCAAGGGCCTGGCCACAGGATGGGCTCAAGAGTAGGGGCTGAATCCTGTGATGTGGGTCAACAGAATAAGGCAGGTCCCCAGACCCAGAGGAGGTGAGATCAGG----GGCCCACAGGCAGAAACAGCTAAGTCtaggctcccgaccagcctctagcttccatgtggacccgctctccccagtcatgggcttcccagaggccagaggaaacttgt-aacaggtaaagcacattccattccactcagctcccagctctccacagcttccggtcttactcgagggaaaatccaaatctgctgacgcagcccacaagcccctccccagtctgttccctcTGACGTTGTCCCCctc i rheMac3.chr1 C 0 I 90 s macFas5.chr1 29901557 881 - 227556264 ccccttgacttcctgGGTCACCTTAGGGAAGGAGCTTCACTTTCTCATCTTCCAGGAAGGACGTAGCAGAAGAGGAACCGAAGTGTGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCTAGGAGCCCTGGTATGTGAGGTTGCatcctcaggacctccactggagtaggtattattctctccaatttacagacaaggaaactgctacctagaaaggtttagagacttgactaacgtcacatcgcaagtatgtggcagggccggattcaaacacagg---ctctgaatctctccaCCCATCGCAGGCTGCTTCAGGGCCGGGCACGCCTGCAT------------AGCTGGGGTAGAGGTTGGAGGATAGATCTGGCCGGTGGCTATGGGTTCTCAGGCCCACAGGCAAATAAGAGGCTCCCGAAAGCTGGGTATCGGGGGTGGCCTCAGGAGCCTTGTGACTGTGGTCAGGAAGGGAGAGCCCAGGACTGGGCAGCAAGAAGA-CAGGGCAGACACGAGACTCCGGAGAGTGGGCTCACGACTGGGGAGGATGCAAGGGCCTGGCCACAGGATGGGCTCAAGAGTAGGGGCTGAATCCTGTGATGTGGGTCAACAGAATGAGGCAGGTCCCCAGACCCAGAGGAGGTGAGATCAGG----GGCCCACAGGCAGAAACAGCTAAGTCtaggctcccgaccagcctctagcttccatgtggacccactctccccagtcatgggcttcccagaggccagaggaaacttgt-aacaggtaaagcacattccattccgctcagctcccagctctccacagcttccggtcttactcgagggaaaatccaaatctgctggcgcagcccacaagcccctccccagtctgttccctctgacctTGTCCCCctc i macFas5.chr1 C 0 I 52 s papAnu2.chr1 32664955 880 + 220367699 CCCCTTGACTTCCTGGGTCACCTTAGGGAAGGAGCTTCACTTTCTCATCTTCCAGGAAGGACGTAGCAGAAGAGGAACCGAAGTGTGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCTAGGAGCCCTGGTATGTGAGGTTGCATCCTCAGGACCTCCACTGGAGTAGGTATTATTCTCTCCaatttacagacaaggaaactgctACCTAGAAAGGTTTAGAGACTTGACTAACGTCACATTGCAAGTGTGTGGCAGGGCCGGATTCAAACACAGG---CTCTGAATCTCTCCACCCATCGCAGGCTGCTTCAGGGCCGGGCACGCCTGCAT------------AGCTGGGCTAGAGGTTGGAGGATAGATCTGGCCGGTGGCTATGGGTTCTCAGGCCCACAGGCAAATAAGAGGCTCCCGAAAGCTGGGTATCGGGGGTGGCCTCAGGAGCCTTGTGACTGTGGTCAGGAAGGGAGAGCCCAGGACTGGGCAGCAAGAAGA-CAGGGCAGACACGAGACTCCAGAGACTGGGCTCACGACTGGGGAGGATGCAAGGGCCTGGCCACAGGATGGGCTCAAGAGTAGGGGCTGAATCCTGTGATGTGGGTCAACAGAATGAGGCAGGTCCCCAGACCCAGAGGAGGTGAGATCAGG----GGCCCACAGGCAGAAACAGCTAAGTCTAGGCTCCCGACCAGCCTCTAGCTTCCATGTGGACCTGCTCTCCCCAGTCATGGGCTTCCCAGAGGCCAGAGGAAACTTGT-AACAGGTAAAGCACATTCCATTCCGCTCAGCTCCCAGCTCTCCACAGCTTCCGGTCTTACTCGAGGGAAAATCCAAATCTGCTGGCGCAGCCCACAAGCCCCTCCCCAGTCTGTTCCCTCTGACCTTGTCCCCCT- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28181477 880 - 130588469 cccCTCGACTTCCTGGGTCACCTTAGGGAAGGAGCTTCACTTTCTCATCTTCCAGGAAGGAGGTATCAGAAGAGGAACTGAAGTGAGTGCAAAGTCTGCTGGGGGCCAGGAGCTGCCAGGAGCCCCCGTATGTGAGGTTGCatcctcaggacctccgctgcagtaggtattgttctctccaatttacagacaaggaaactgctacctagaaaggtttagagacttgactaacatcacatcgcaagtgtgtggaagggctggattcaaacacagg---ctctgaatctctccaCCCATCACAGGCTACTTCAGGGCCGGGCACCCCCGCAT------------AGCTGGGGTAGAGGTTGGAGGACAGATCTGGCCGGTGGCTATGGGTTCTCAGGCCCACAGGCAAATAAGAGGCTCCCGAAAGCTGGGTATCGGGGGTGGCCTCAGGAGCCTTGTGACTGTGGTCAGGAAGGGAGAGCCCAGGACTGGGCAGCAAGAAGA-CAGGGCAGACACGAGACTCCAGAGACTGGGCTCACGGCTGGGGAGGATGCAAGGGCCTGGCCACAGGATGGGCTCAAGAGTA-GGGCTGAATCCTGTGATGTGGGTCAATAGAATGAGGCAGGTCTCCAGACCCAGAGGAGGTGAGATCAGG----GGCCCACAGGCAGAAACAGCTAAGTCtaggctcccgaccagcctctagcttccatgtggacccgctctgcctagtcatgggcttcccagaggccagaggaaacttgt-aacaggtaaagcacattccattccactcagctcccagctctccacagcttccggtcctactcaagggaaaatccaaatctgctggcacagcccacaagcccctccccagtctgttccctctgacctTGTCCCCctc i chlSab2.chr20 C 0 I 89 s calJac3.chr7 64637016 867 + 155834243 cccCCTGACTTCCTGGGTCACCTTAGGGAAGAAGCTTCAGCTTCTCATCTTCCAGGAAGGAAGTAGGAGAACAGGAACCGAAGGGAGTGTGA---------GGGgccaggagctgccaggagcccttgtacataagattgcatcctcaggatctcccctggagtaggtattgttctctccatttaacagacaaggaaactgctacccagaaagtcttagagac--aactgacgtcacacggcaagtgtgtggcagggccagattcaa--acaggtccctctgaatcTCTCTACCCGTCGCAGGCTACTTCAGGGCCTGGCACCCCCACGTGGTTGGAGTAGGAGCTGGGGCAGAGGTTTGAGGATAGCTCTGGCTGCTCGCTATGCATTCTCAGGCCCACAGGCAAACAAGAGACTTCAGAAAGCTGGGCATCGGGGGTGGCCTTAGGAGCCCTGTGAC--TGGTCGGGAAGGGAGAGCTCAGAACTGGGCAGCAAGAAGACCAGGGGAGATATGACGCTTGGGAGAGTCAGCTCACAGCTGGGGAGGCTGCAGGGCCCTGGCTGCAGGATGGGCTCAGGAGTAGGGGCTGGATCCCGTGAGGTG------------------GGTCCCCAGACCCGGAGGAGGCGAGGTCAGGGAGAGGTTTACAGGCAGAAATAGCTAAGTCCaggctcccgaccagcctccagcttccacctgggtctgccctcaccagtcatggtcttcccagaggccagaggaaatgtgtaagcaggtaaagcacatcccatccagctcagctcccagccc-ccacagcttccagtcttactcaagggaaactccaaatctgctggcgcagcctgcaagccccttccccatctgtcccctctgacc-tatccccctc i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I a score=8423.000000 s hg38.chr1_KI270760v1_alt 70596 13 + 109528 cctcttcgctact s panTro4.chr1 30507123 13 + 228333871 cctcttcgctact i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096289 13 - 229942017 cctcttcgctact i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29902490 13 - 227556264 ttctatccctatt i macFas5.chr1 I 52 I 25 s papAnu2.chr1 32665835 13 + 220367699 CAACATCGTTAGT i papAnu2.chr1 C 0 I 78 s calJac3.chr7 64637883 13 + 155834243 cctcttccctact i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I e chlSab2.chr20 28182357 89 - 130588469 I e rheMac3.chr1 33391203 90 + 229590362 I a score=600.000000 s hg38.chr1_KI270760v1_alt 70609 1 + 109528 c s panTro4.chr1 30507136 1 + 228333871 c i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096302 1 - 229942017 c i ponAbe2.chr1 C 0 C 0 s calJac3.chr7 64637896 1 + 155834243 c i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I e chlSab2.chr20 28182357 89 - 130588469 I e rheMac3.chr1 33391203 90 + 229590362 I e papAnu2.chr1 32665848 78 + 220367699 I e macFas5.chr1 29902503 25 - 227556264 I a score=216514.000000 s hg38.chr1_KI270760v1_alt 70610 89 + 109528 accaacctacagccatactgacttcctgctgttcctcaagcaagtgaagcccgctatagcctcagggcctttgcacatgctcttccctc s panTro4.chr1 30507137 89 + 228333871 accgacctacagccatactgacttcctgctgttcctcaaacaagtgaagcccgctacagcctcagggcctttgcacatgctcttccctc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096303 89 - 229942017 accgagctacagccatactgacctcctgctgttcctcaaacaagtgaagcccgctgcagcctcagggtctttgcacatgctcttccctc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33391293 89 + 229590362 acCGAGCTAGGgccatactgacttcctgctgttcctcaaacaagtgaagcccactgcagcctcaggccctttgcacatgctcttccctc i rheMac3.chr1 I 90 C 0 s macFas5.chr1 29902528 89 - 227556264 acCGAgctacggccatactgacttcctgctgttcctcaaacaagtgaagcccactgcagcctcaggccctttgcacatgctcttccctc i macFas5.chr1 I 25 C 0 s papAnu2.chr1 32665926 89 + 220367699 ACCGAGCTACGGCCATACTGACTTCCTGCTGTTCCTCAAACAAGTgaagcccactgcagcctcaggccCTTTGCACATGCTCTTCCCTC i papAnu2.chr1 I 78 C 0 s chlSab2.chr20 28182446 89 - 130588469 acCGAgctacagccatactgacttcctgctgttcctcaaacaagtgaagcccactgcagcctcaggccctttgcacatgctcttccctc i chlSab2.chr20 I 89 C 0 s calJac3.chr7 64637897 89 + 155834243 actaagctacagccatactgatttcctgctgttcctcaaagaagtgaagcctgctgcagcctcagggcctttgcacatgctcttccctc i calJac3.chr7 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I e canFam3.chr2 15009876 580 - 85426708 I a score=14473.000000 s hg38.chr1_KI270760v1_alt 70699 7 + 109528 tg-GTGGC----- s panTro4.chr1 30507226 8 + 228333871 tgtgtggC----- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096392 8 - 229942017 tgtgtggC----- i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33391382 8 + 229590362 tgtgtggC----- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29902617 8 - 227556264 tgtgtggC----- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32666015 8 + 220367699 TGTGTGGC----- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28182535 8 - 130588469 tgtgtggC----- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64637986 8 + 155834243 tgtgtggC----- i calJac3.chr7 C 0 C 0 s canFam3.chr2 15010456 13 - 85426708 tggtgggctTACC i canFam3.chr2 I 580 C 0 e mm10.chr4 25430141 2387 - 156508116 I e nomLeu3.chr24 555215 1331 - 28733288 I a score=687251.000000 s hg38.chr1_KI270760v1_alt 70706 198 + 109528 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------CGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGGGTTTCCAGCTGGGA------GGGAACCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTGGGGTGGACCGGAGGGTGGGCTGGAGGGGATGAGCTTGAGGGCAGAGAGAGTGCTCAGTGTGCAGAGCTGGGGCAT s panTro4.chr1 30507234 198 + 228333871 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGGGTTTCCAGCTGGGA------GGGAACCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTGGGGTGGACCAGAGGGTGGGCTGGAGGGGATGAGCTTGAGGGCAGAGAGAGTGCTCAGTGTGCAGAGCTGGGGCAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096400 198 - 229942017 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGGGTTTTCAGCTGGGA------GGGAACCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTGGGGTGGATCGGAGGGTGGGCTGGAGGGGATGAGCTTGAGGGCAGAGAGGGTGATTAGCGTGCAGAGCTGGGGCGT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 556546 186 - 28733288 TGGTTTCCATCTGGCTGATGTCTGTGCCTCTGCG------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGGGTTTCCAGCTGGGA------GGGACCCAGCCAGCTTTGTGCTGCTGATGGGCATTCTGGGTTAGA------------CTGGAGGGGACGAGCTTGAGGGCAGAGAGCATGCATAGTGTGTGGAGCTGGGGCAT i nomLeu3.chr24 I 1331 C 0 s rheMac3.chr1 33391390 198 + 229590362 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGAGTTTCCAGCTGGGA------GGGACTCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTAGGGTGTACTGGAGGGTGGGCTGGAGGGGATGAGCTTGAGGGCAGAGAGGGTGCTCAGCGTGCAGAGCTGAGGCAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29902625 198 - 227556264 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGAGTTTCCAGCTGGGA------GGGACTCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTAGGGTGTACTGGAGGGTGGGCTGGAGGGGATGAGCTTGAGGGCAGAGAGGGTGCTCAGCGTGCAGAGCTGAGGCAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32666023 198 + 220367699 TGGTTTGCACCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGAGTTTCCAGCTGGGA------GGGACTCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTAGGGTGTACTggagggtgggctggaggggatGAGCTTGAGGGCAGAGAGGGTGCTCAGCGTGCAGAGCTGAGGCAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28182543 198 - 130588469 TGGTTTGCATCTGGCTGATGTCTGTGCCTCTGCA------------------------TGGGCTGTGAGCTGAGGGCACTG-GGAGCCTGGGAAGAGTTTCCAGCCGGGA------GGGACCCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTAGGGTGTGCTGGAGGGTGGGCCGGAGGGGATGAGCTTGAGGGCAGAGAGGGTGCTCAGCGTGCAGAGCTGAAGCAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64637994 198 + 155834243 TGATTTGCACCTGGCTGATATCTGTGCCTCTGCA------------------------TGAGCTGGGAGCTGAGGGCACTG-GGAGCCTGGGAAGGGTTTCCAGCTGGGA------GGAACCCAGCCAGCTTTGTGCTGCTGAGGGGCATTCTGCGGTGGACTGGAGGGTGGGCTGGAGGGGATGAGCTTGAGGACAGGGAGGGTACTCAGCGTGCAGAGTTGGGGCAT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15010469 228 - 85426708 TGTTGTGTACCTGGCTGATGCCTGTGCCTCTGCGAGGCTGGTTCCAGACGAGGGAGTTTGGACCATGACCTGAGAATACCGCGGAGCCTGGGAAGGGTTTCCAGCAGGAAGGTGGCGGGAAGCAGTCAGCTTTGTGCAGCAGAGGATCGCTCTGGGACAGAGTGGAGGGTTGGCTGCAGGGGACGGGCTTGCAGGCAGAGAGGCTG-TCTGTACCCAGAGCCAGGGCGC i canFam3.chr2 C 0 C 0 e mm10.chr4 25430141 2387 - 156508116 I a score=1281866.000000 s hg38.chr1_KI270760v1_alt 70904 419 + 109528 GAGGTGGGCTCAGCTGAAGGGCCAGGGAGGTCACAAATG-----GTCAGGATGGGCCCCAGGTCAGGTGGGGAGAAGCAGCCAGGC------CAGTGGTTTTGATGTGGAAATGTCTGAACTGCAGAACA----AGCCTCCTTT-CAACTCCCAATTAACATGGGAGCCTCCCCAGCCAGGCAGAGCTGGGTTGGCAGGTGGGGCCCAGAGGCTGTGGGGTCAGGGAGTGGGGATGGAG-GGAGAGCCAGCCAAGACATTAC----------CATGGGC-------------ATGTGAGAAAGGAACGTTCTGTCAACTGGAACCAGCGCAGGGAAATCCAACAGGGCTA-A-GAATTTTCCTCCCACCAGCAAGCTGAAGGGGAAACGCATTTGTTTCCGCCGCACATTAGTGTTTTTCAGGAGATAATGTGACTG-TTTTTGCGCTA-GAAAGTCATGAAT s panTro4.chr1 30507432 419 + 228333871 GAGGTGGGCTCAGCTGAAGGGCCAGGGAGGTCACAAATG-----GTCAGGATGGGCCCCAGGTCAGGTGGGGAGAAGCAGCCAGGC------CAGTGGTTTTGATGTGGAAATGTCTGACCTGCAGAACA----AGCCTCCTTT-CAACTCCCAATTAACATGGGAGCCTCCCCAGCCAGGCAGAGCTGGGTTGGCAGGTGGGGCCCAGAGGCTGTGGGGTCAGGGAGAGGGGATGCAG-GGAGAGCCAGCCAAGACATTAC----------CATGGGC-------------ATGTGAGAAAGGAACATTCTGTCAACTGGAACCAGCGCACGGAAATCCAACAGGGCTA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGAAAACGCATTTGTTTCCGCCACACATTAGTGTTTTTCAGGAGATAATGTGATTG-TTTTTGCGCTA-GAAAGTCATGAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30096598 419 - 229942017 GAGGTGGGCTCGGCTGAAGGGCCAGAGAGGTCACAAATG-----ATCAGGATGGGCCCCAGATCAGGTGGGGAGAAGCAGCCAGGC------CAGTGGGTTTGATGTGGAAGTGTCTGAACTGCAGAACA----AGCCTCCTTT-CAACTCCCAATTAACATGGGAGCCTCCCCAGCCAGGCAGAGCTGGATTGGCAGGTGGGGCCCAGAGGCTGTGGGGTCAGGGAGCGGGGATGGAG-GGAGAGCCAGCCAAGACATTAC----------CATGGGC-------------ATGTGGGAAAGGAACATTCTGTCAACTGGAACCAGCGCAGGGAAATCCAACAGGGCCA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGGAAACGCATTTGTTTCCACCACACATTAGTGTTTTTCAGGAGATAATGTGATTG-TTTTTGCGCTA-GAAAGTCATGAAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 556732 400 - 28733288 GAGGTGGGCTTGACTGGAGGACCAAGGAGGGCACAAATG-----GTCAGGATGTGCCTCCGGTCAGCTGGAGAGAAGCAGTCAAGA------CAATGGCCTTGATGTGGAAATGCCTCAGCTGCCGAACA----AGGCTTCTTC-AAACTCCCAACTAACGTTGGGGTCTCCCCACCTAGGCAGAGACAGACTGGCAGGCAAGGCTTGGGGGCTGGGGGTTCAGAGAGCTGAGAAG---------ATCAACCAGGGCATCACCCACACAACTCACAGGG-------------ATGTCAG-GAGGAACATGCGGTCAGCCAGAACCAGAGCA-GGAAAGCTGACAAGACTAGA-GAAGTTTCCTCCCACCAGACAGCCAAAGAG-AAACACATTTG--------------------TTTTCAGGAGACAACGTGATTGTTTTTTGCACTG-AAAAGGCATGAAT i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33391588 417 + 229590362 GAGGTGGGCTCAGCTGAAGGACCAGTGAGGTCACAA-----------AGGATGGGCCCTAGGTCAGGTGGGGAGAAGCAGCCAGGC------CAGTGGGTTTGATGTGGAAATGTCTGAACTGCAGAACAAACAAACCTCGTTT-CAACTCCCAATTAACATGGGAGTCTCCCCAGCCAGGCAGAGCTGGATTGGCAGGTGAGGCCCAGAGGCTGTGGGGTCAGGGAGCAGGGATGGAG-GGAGAGCCAGCCCAGACACTAC----------CATGGGC-------------ATGTGAGAAAGGAACATTCTGTCAACTGGAACCAGCGCAGGGAAATCCAGCAGGGCTA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGGAAGCACATTTGTTTCCGTGGCACATTAGTGTTTTTCAGGAGATAATATGATTG-TTTTTGCACTA-GAAAGTCATAAAC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29902823 417 - 227556264 GAGGTGGGCTCAGCTGAAGGACCAGTGAGGTCACAA-----------AGGATGGGCCCTAGGTCTGGTGGGGAGAAGCAGCCAGGC------CAGTGGGTTTGATGTGGAAATGTCTGAACTGCAGAACAAACAAACCTCGTTT-CAACTCCCAATTAACATGGGAGTCTCCCCAGCCAGGCAGAGCTGGATTGGCAGGTGAGGCCCAGAGGCTGTGGGGTCAGGGAGCAGGGATGGAG-GGAGAGCCAGCCCAGACACTAC----------CATGGGC-------------ATGTGAGAAAGGAACATTCTGTCAACTGGAACCAGCGCAGGGAAATCCAGCAGGGCTA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGGAAGCACATTTGTTTCCGTGGCACATTAGTGTTTTTCAGGAGATAATATGATTG-TTTTTGCGCTA-GAAAGTCATAAAC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32666221 417 + 220367699 GAGGTGGGCTCAGCTGAAGGACCAGTGAGGTCACAA-----------AGGATGGGCCCTAGGTCAGGTGGGGAGAAGCAGCCAGAC------CAGTGGGTTTGATGTGGAAATGTCTGAACTGCAGAACAAACAAACCTCGTTT-CAACTCCCAATTAACATGGGAGTCTCCCCAGCCAGGCAGAGCTGGATTGGCAGGTGAGGCCCAGAGGCTGTGGGGTCAGGGagcagggatggag-ggagagCCAGCCCAGACACTAC----------CATGGGC-------------ATGTGAGAAAGGAACATTCTGTCAACTGGAACCAGCGCAGGGAAATCCAACAGGGCTA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGGAAGCACATTTGTTTCCGTGGCACATTAGTGTTTTTCAGGAGATAATATGATTG-TTTTTGCGCTA-GAAAGTCATAAAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28182741 423 - 130588469 GAGGTGGGCTCAGCTGAAGGACCAGTGAGGTCACAAATG-----GTCAGGATGGGCCCCAGGTCAGATGGGGAAAAGCAGCCAGGC------CAGTGGGTTTGATGTGGAAATGTCTGAACTGCAGAACAAACCAACCTCGTTT-CAACTCCCAATTAACATGGAAGTCTCCCCAGCCAGGCAGAGCTGGATTGGCAGGTGAGGCCCAGAGCCTGTGGGGTCAGGGAGCAGGGATGGAG-GGAGAGCCAGCCCAGACACTAC----------CATGGGC-------------ATGTGAGAAAGGAACATTCTGTCAGCTGGAACCAGCGCAGGGAAATCCAACAGGGCTA-A-GAAGTTTCCTCCCACCAGCAAGCTGAAGGGGAAGCACATTTGTTTCCGTGGCACATTCGTGTTTTTCAGGAGATAATATGATTG-TTTTTGCCCTA-GAAAGTCATAAAC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64638192 411 + 155834243 CAGGTGAGCTCAGCTGAAGGACCAGGGAGGTAACGAATG-----GTCAGGATGGGCCCCAGGTCAGGTGGGGAGAAGCAGCCAGGC------CAGTGGGTTGGATGTGGAAATGTCTGAACTGCAGATCA----AGCCTCCTTC-CAACCCCCAATAAACATGGGGGTCTCCGTAGCCAAGCAGAGGTGGATTGGCAGGTGGGGCCCAGAGGCTGTGGGGTCTGGGAGCTGGGATGGAG-GGAGAGCCAGCCAAGACATTAC----------CATAGGC-------------ATGCGAGAAAGAAACAT--TGTC------AACCAGCACAGAGAAATCCAACAGGGCTC-A-GAAGTTTCCTCCTACCAGCAAGCCGAATGGGAAACACATTTGTTTCCACCACCCATTAGTGTTTTTCAGGAGACAATGTGATTG-TTTTTGTGCTG-GAAAGTCATGAAT i calJac3.chr7 C 0 C 0 s mm10.chr4 25432528 402 - 156508116 GAGGGACATTCAACCAGAGGGTCAGGGAAGGCATAGGGG----CTTCAGGATTGGCCCCTGGTCAGG-GAGAGGGAGCAGCCAGGCTGCCAACGGAGGAATTTAT-TGGAAATGTCTGAGTCACATACAG----AG-----------GCTTCGAGTGCATCCGGGACACT---------AGCAAAGCTGGGCTGTCGGCTGGGGTT--GAGACTGCAGCATCCGAGGCCTAAGATGATGCAGGGAAGAAACCAGAGTCTCAC----------CATGG-----------------ATGACAGAGGATTCTATGGTCAACTGCAGCCAGTCCAGGGAGACTGCACAGGGCTG-AGGAAGTTTCTGCCCAGCAGAAACTCTAAGGGGAGACACACTGGGTTCCATGACACAGCAGTGTTGGTCAGGAGACCACATACTTA-GTTTCCCTCTCTGAAAAGCCCGAGT i mm10.chr4 I 2387 I 1516 s canFam3.chr2 15010697 408 - 85426708 GAGGGGTCCTCTGCCAGAGGACCAGGGAAGGGCCCAGTGGTGAGGTGAGGGCGGGCCCCAGGT-----------------------------CAGCGGGCTTGACGTGGAAATGTCTGAGTTGCAGAACT----AGGCTTCTCCAAAACTCCCAACTAACTTGAGGCCCTTCCCGGACCCGTAGAACTGCACTGATGGGCAGGGCTCTGTGGCCATGGACTTGAAGAGCTG---------GGAAGGTCAGCCAGGGCTTTGC----------CACGAGGTGAGGAAGGAAGAATGTGAGGAAGCAGCCTTCTGCCAACCAGAACCAGCATGGGGAGCCCTGGCAGGATCA-GGGACATTTTCTCCCACCAGAAAGTCAAAGGGGAAACATTTTCATTTCCATAACACATTTGTACTTTTTAAGAAACCCTGAGATTG-TTTTTGCACTG-GGAAGCTGTGGAT i canFam3.chr2 C 0 C 0 a score=1674913.000000 s hg38.chr1_KI270760v1_alt 71323 479 + 109528 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATGGAGA------AAGCTTCTGTCTCTAGCTTACTggtgcctggagttccaccactggagctccggtcctatggcttggggccttgtcatttgttaaaatgcaaac--aACTTCACTGAAGTCAT---GT-TTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctggaggctgagaacagagaaattaattaagacttgtccaga-cgaagccttcaaggaactggcaaactctgtgtgttttgcgggtgga----------gggggtgcaataa-----gaaaacctgaccat-atggtgctgcaaa--atggtggtgggaataaggtgccag-ggggacccccagaagaagcaactcatttcacattt----gcagaaggc------gaggcttcagctgggatctggaggatgaggggtggggagcagggtgg s panTro4.chr1 30507851 479 + 228333871 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATGGAGA------AAGCTTCTGTCTCTAACTTACTggtgcctggagttccaccactagagctccggtcctatggcttggggccttgtcatttgttaaaatgcaaac--aACTTCACTGAAGTCAT---GT-TTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctggaggctgagaacagagaaattaattaagacttgtccaga-tgaagccttcaaggaactggcaaactctgtgtgttttgggggtgga----------gggggtgcaataa-----gaaaacctgaccat-atggtgctgcaaa--atggtggtgggaataagttgccag-ggggacccccagaagaagcaactcatttcacattt----gcagaaggt------gaggcttcagctgggatctggaggatgaggggtggggagcagggtgg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097017 480 - 229942017 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATAGAGA------AAGCTTCTGTCTCTAGCTTACTGGTGCCTGGAGTTCCACCACTGGAGCTCCGGTCCTATGGCTTGGGGCCTTGTCATTTGTTAAAATGCAAAC--AACTTCACTGAAGTCAT---GTGTTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctggaggctgagaacagagaaattaattaagacttgtccaga-cgaagccttcaaggaactggcaaactctgtgtgttttgggggtgga----------gggggtgcaataa-----gaaaacctggccat-atggtgttgcaaa--atggtgatgggaataaggtgccag-ggggacccccagcagaagcaactcatttcacattt----gcagaaggc------gaggcttcagctgggatctggaggatgaggggtggggagcaggatgg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 557132 494 - 28733288 AGAAAATTCCA-CTTTCCAAGACAGCCATCTCCTCCCCCAAGCATTAA-------AGG------GatcttctgtatccagcttattggtgcttgaaattctacgactggagctccatttctatggcttgaggctttgccatttgttaaaatgcaaacaAAACTTCAAAGAAGTCAT---GTCTTCAACACAAACTTATTttcattaattcaacaaatacttattgagttctttctttcaaccaggcagtacccagagtctgagaacagagaaattaattaagtcctatccagagccaaaccttcaaggacctGGCAAGGTCTGTGCGGATAGCAGGTGGAAAGTAGGGGCGGGGAGGCAATAATTTCCTTATTGCTGACCATAATGGTGTTGGAAATGATGGTGGTGGGCGCGAGGTGCTGT-GGGAATCCCCGGCAGAGTTTATTCATTTCAAAGTT----GCAAAAGGT------GAAGCTTGACCTGGGATCGAAAAGATAAGGA--GGGTAAAGGTTAGG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33392005 475 + 229590362 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATAGAGA------AAGCCTCTGTCTGCGGCTTACTggtgcctggagttccaccactggagctccagtcctgtggcttggggccttgtcatttgttaaaatgcaaac--aACTTCACTGAAGTCAT---GTCTTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctagaggctgagaacagagaaattaattaagacttgtccaga-cgaagccttcaaggaactGGCAAACTCTGTGTGTTTTGGGGGTGGA----------GGGGGTGCAGTAA-----GAAAACCTGACCAT-ATGGTGTTGC--T--ATGGTGGTGGGAATAAGGTGCCA--GGGGCCCCCCAGCAGAAGCGACTCATTTCACATTT----GCAGAAGGC------AAGGCTTCAGCTGGGATCTGGAGGAT--GGGCTGGGGAGCAGGGTCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903240 478 - 227556264 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATAGAGA------AAGCCTCTGTCTGCGGCTTACTggtgcctggagttccaccactggagctccagtcctgtggcttggggccttgtcatttgttaaaatgcaaac--aACTTCACTGAAGTCAT---GTCTTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctagaggctgagaacagagaaattaattaagacttgtccaga-cgaagccttcaaggaactGGCAAACTCTGTGTGTTTTGGGGGTGGA----------GGGGGTGCAGTAA-----GAAAACCTGACCAT-ATGGTGTTGCAAA--ATGGTGGTGGGAATAAGGTGCCAG-GGGGCCCCCCAGCAGAAGCGACTCATTTCACATTT----GCAGAAGGC------AAGGCTTCAGCTGGGATCTGGAGGAT--GGGCTGGGGAGCAGGGTCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32666638 478 + 220367699 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCCTCCCCCAGGCACTAAAGAATAGAGA------AAGCCTCTGTCTGCAGCTTACTGGTGCCTGGAGTTCCACCACTGGAGCTCCAGTCCTGTGGCTTGGGGCCTTGtcatttgttaaaatgcaaac--aaCTTCACTGAAGTCAT---GTCTTCAACacaaac--attttcattaattcaacaaatatttattgagctcttgcTCTAAACCAGGCAGTACCTAGAGGCTGAGAACAGAGAAATTAATTAAGACTTGTCCAGA-CGAAGCCTTCAAGGAACTGGCAAACTCTGTGTGttttgggggtgga----------gggggtgcAGTAA-----GAAAACCTGACCAT-ATGGTGTTGCAAA--ATGGTGGTGGGAATAAGGTGCCAG-GGGGCCCCCCAGCAGAAGCGACTCATTTCACATTT----GCAGAAGGC------AAGGCTTCagctgggatctggaggat--gggcTGGGGAGCAGGGTCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183164 479 - 130588469 GGAAAATTCCA-CCTGCCAAGACAGCCAGTTCGTCCCCCAGGCACTGAAGAATAGAGA------AAGCCtctgtctgtagcttactggtgcctggagttccaccactggagctccagtcctatggcttggggccttgtcatttgttaaaatgcaaac--aACTTCACTGAAGTCAT---GTCTTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaaccaggcagtacctagaggctgagaacagagaaattaattaagacttgtccaga-caaagccttcaaggaactGGCAAACTCTGTGTGTTTTGGGGGTGGA----------GGGGGTGCAGTAA-----GAAAACCTGACCAT-ATGGTGTTGCAAA--ATGGTGGTGGGAATAAGGTGCCAGTGGGGCCCCCCAGCAGAAGCGACTCATTTCACATTT----GCAGAAGGC------GAGGCTTCAGCTGGGATCTGGAGGAT--GGGCAGGGGAGCAGGGTGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64638603 477 + 155834243 GGAAAATTCCA-CCTGCCAAGACAGCCAGCTCCTCCCCCAGGCACTAAAGGATAAAGA------AAGCTTCTGTCTACAGCTTCCTGGTGCCTGGAGTTCCACCGCGGGAGCCCC-GTCCTATGGCTTGGGGCTTGGTCATTTGTTAAAATGCAAAC--AACGTCACTGAACTCGT---GTCTTCAACACAAAC--ATTttcattaattcaacaaatatttattgagctcttgctctaaatcaggcagtacctggaggctgagaacaaagaaattaattaagacttgtccagaataaagccttcaaggaactggcaagctctgtgtgttttgggggtgga-----------ggggtacggtaa-----gaaaacttgaccat-atgg-gttgcaaa--atggtggtgggaataaggtgccaa-gggga-ccccagcagaagtgactcatttcacactt----gcagaaggc------gaggcttcagctgggatctggaggatgaggggtggggagcagggtgg i calJac3.chr7 C 0 C 0 s mm10.chr4 25434446 453 - 156508116 GGAAAGTCCCACCCTGTCAAGACAGCCATTTCCT--CCCGGACACTAAACAACACAGGGGTCACAGGCATTTGCCCCCAGCTTGTTGATGCTTGAAATGTCAGCACTGGAGTTTCGTCGCTATGGCTGGTGCCTTTGTCTTCCGTTGAAGAACAAAC--AGTGCTGCTGAAGTCTTCTCGTCTTC--CACGGAC--ATTttcattaattcaacaaatatttattgagttcttactctaagccaggcagttcctagagttcaggaacaaagatattaattaagacTTGTCCAGAGCCGAACCTTCAGGGAATCAGAAA---------------------------------TGAGGTACAGT-------------CTGACCAC-AGGATCTTGCAAA--GGGCTACGGGAAAGAAGGCACAGG-AGA-----CCAG-AGTGGTGGCTTAACTCGTGCTCTACGGCAGGGGGCTTGTAGGAGACT-------GAGTCATGAATGTCAGGAAAGGGGAGAAGAGTAG i mm10.chr4 I 1516 I 1234 s canFam3.chr2 15011105 472 - 85426708 GGAAAGTTCCA-TGGGCCA----------TTCCTCCTCCGGGCGCTAAACAAGAGAGG------AGGCTCCTGTCCCCAATTTGCTggtgcctgtatttctaccattggagcttcattcctaaggcttgaggcttcgtcctttgttaaaatgcaaac--aACTGCACAGAAATCAT---GTCTTCAACACAGACTTATTttcactaactcaataaatatttattgacttcttggtctcagccaagcagtatctagaggctgggaatagagagattaattaaggcttctccaggtccacaccttcaaggaactggcaagctccgtgtgtatggggcctggg---------ctgcggggtaata------ggaagcctggccgtaatggtgcagtgaatgatggtggtgggaaccaggtgctt--gggagcccccagcagaggtgacccatttcattgct----gcaaaaggt------ggagcttgagctgcaatctgaaggatgaagggcgggtagggggt--- i canFam3.chr2 C 0 C 0 a score=209235.000000 s hg38.chr1_KI270760v1_alt 71802 64 + 109528 ggatgagaatcccagatgaagggcacaataagAATGAATGAACAGAGTCATGAAGCAGCATAGG s panTro4.chr1 30508330 64 + 228333871 ggatgagaatcccagatgaagggcacaataagAATGAATGAACAGAGTCATGAAGCAGCATAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097497 64 - 229942017 ggatgagaatccaagatggagggcacaataagAATGAATGAACAGAGCCATGAAGCAGCATAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 557626 64 - 28733288 GGCTGAGAATCCCGGATGGAGGGCTCAGCAAGGGCGAATGAATGGAGTCATGAGCCAGTACGGG i nomLeu3.chr24 C 0 I 523 s rheMac3.chr1 33392480 64 + 229590362 GGATGAGAACCCCAGGTGGAGGGCACAATAAGAATGAATGAACAGAGTCATGAAGCAGCATAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903718 64 - 227556264 GGATGAGAACCCCAGGTGGAGGGCACAATAAGAATGAATGAACAGAGTCATGAAGCAGCATAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667116 64 + 220367699 GGATGAGAACCCCAGGTGGAGGGCACAataagaatgaatgaacagagTCATGAAGCAGCATAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183643 64 - 130588469 GGATGAGAATCCCAGGTGGAGGGCACAATAAGAATGAATGAACAGAGTCATGAAGCAGCATAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639080 63 + 155834243 ggctgagaatcccaggtggagggcaccataagaat-aatgaacgaagtcatgaagcagCATGAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15011577 63 - 85426708 ggttgagaatcccagg-agagggcacagtcaggacccatgaacggggtcatgagccagcatggt i canFam3.chr2 C 0 C 0 e mm10.chr4 25434899 1234 - 156508116 I a score=2362.000000 s hg38.chr1_KI270760v1_alt 71866 2 + 109528 GG s panTro4.chr1 30508394 2 + 228333871 GG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097561 2 - 229942017 GG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33392544 2 + 229590362 GC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903782 2 - 227556264 GC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667180 2 + 220367699 GC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183707 2 - 130588469 GT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639143 2 + 155834243 GG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15011640 2 - 85426708 gg i canFam3.chr2 C 0 I 501 e mm10.chr4 25434899 1234 - 156508116 I e nomLeu3.chr24 557690 523 - 28733288 I a score=24640.000000 s hg38.chr1_KI270760v1_alt 71868 10 + 109528 TGCATGGCCT s panTro4.chr1 30508396 10 + 228333871 TGCATGGCCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097563 10 - 229942017 TGCATGGCCT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33392546 10 + 229590362 TGCATGGCCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903784 10 - 227556264 TGCATGGCCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667182 10 + 220367699 TGCATGGCCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183709 10 - 130588469 TGCATGGCCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639145 10 + 155834243 TTCGTGGCCT i calJac3.chr7 C 0 C 0 e mm10.chr4 25434899 1234 - 156508116 I e nomLeu3.chr24 557690 523 - 28733288 I e canFam3.chr2 15011642 501 - 85426708 I a score=75407.000000 s hg38.chr1_KI270760v1_alt 71878 25 + 109528 GGGCCAGAGCCTGAAGCCCTGGGCC s panTro4.chr1 30508406 25 + 228333871 GGGCCAGAGCCTGAAGCCCTGGGCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097573 25 - 229942017 GGGCCAGAGCCTGAAGCCCTGGGCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 558213 24 - 28733288 GAGCCCAAACCTGAA-CCCAGGGTC i nomLeu3.chr24 I 523 C 0 s rheMac3.chr1 33392556 25 + 229590362 GGGCCAGAGCCTGAAGCCCTGGGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903794 25 - 227556264 GGGCCAGAGCCTGAAGCCCTGGGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667192 25 + 220367699 GGGCCAGAGCCTGAAGCCCTGGGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183719 25 - 130588469 GGGCCGGAGCCTGAAGCCCTGGGCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639155 25 + 155834243 GGGCCAGAGCCTGAAGCCCTGGGCC i calJac3.chr7 C 0 C 0 e mm10.chr4 25434899 1234 - 156508116 I e canFam3.chr2 15011642 501 - 85426708 I a score=209442.000000 s hg38.chr1_KI270760v1_alt 71903 78 + 109528 AAATGAAGCCTGGGCAGACCTACCTCTGCAGGCCTAGGCCAGCTGAGCCAGTTAATTCCTACCTTTCTTTAAGCCAAT s panTro4.chr1 30508431 78 + 228333871 AAATGAAGCCTGGGCAGACCTACCTCTGCAGGCCTAGGCCAGCTGAGCCAGTTAATTCCTACCTTTCTTTAAGCCAAT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097598 78 - 229942017 AAATGAAGCCTGGGCAGACCTACCTCTGCAAGCCTGGGCCAGCTGAGCCAGTTAATTCCTACCTTTCTTTAAGCCAAT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 558237 78 - 28733288 AGAGGGCAGCTGGGTAGCGCTCGCTCCGGAGGTCTCGGTCGGCTGCGCCGCTGACTTGCCAAATTTGCCTAAGCCCGT i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33392581 78 + 229590362 AAATGACACCTGGGCAGAACTACCTCTGCAGGCCCAGGCTAGCTGAGCCAGCAAATGCCTACCTTTCTTTAAGCCAAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903819 78 - 227556264 AAATGACACCTGGGCAGAACTACCTCTGCAGGCCCAGGCTAGCTGAGCCAGCAAATGCCTACCTTTCTTTAAGCCAAT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667217 78 + 220367699 AAATGACACCTGGGCAGAACTACCTCTGCAGGCCCAGGCTAGCTGAGCCAGCAAATGCCTACCTTTCTTTAAGCCAAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183744 78 - 130588469 AAATGACACCTGGGCAGACCTACCTCTGCAGGCCCAGGCTAGCTGAGCCGGGAAATGCCTGCCTTTCTTTAAGCCAAT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639180 78 + 155834243 AAATGACACCTGGGCAGACCTACCTCTGCAGGCCTGGGTCAGCGGAGCCAGTAAATTCCTTCCTTTCTTTAAGCTGAT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15012143 70 - 85426708 AAATAGGCTCTGGGTAGACCTACCCCTCTGTTC-----TCAGCTGAGCCAGCAGATTCC---CTTTTGCTCAGCCCAT i canFam3.chr2 I 501 C 0 e mm10.chr4 25434899 1234 - 156508116 I a score=371925.000000 s hg38.chr1_KI270760v1_alt 71981 132 + 109528 CTGTTGTCAGCTTTCACCTGAAAGTTCCTAACGGGTACAG-GGCGTTTCTAGAGGGCAGAGTTTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCATGTGCAGGGGTTGGTCAAGTCCTT s panTro4.chr1 30508509 132 + 228333871 CTGTTGTCAACTTTCACCTGAAAGTTCCTAATGGGTACAG-GGCGTTTCTAGAGGGCAGAGTTTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCATGTGCAGGGGTTGGTCAAGTTCTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097676 132 - 229942017 CTGTTGTCAACTTTCACCTGAAAGTTCCTAACGGGTACAG-GATGTTTCTAGAGGGCAGAGTTTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCATGTGCAGGGGTTGGTCAAGTCCTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 558315 117 - 28733288 TTGTTG---GTGTTTGC-----AGGTCCTAACTGATGCGGTGCCGTTTTTCAAGTACAGAATTGGGTAAGCGTTGGAGACAGGGAGCAGCCAGCAGGTGCA-AGCACTT----------GTGTGGGTCCAGTCCCT i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33392659 126 + 229590362 CTGTTGTCAACTTTCACCTGAACGTTCCTAACGGGTACAG-GGCATTTCTAGAGGGCAGAGTCTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCAT------GTGTTAGTCAAGTCCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29903897 126 - 227556264 CTGTTGTCAACTTTCACCTGAACGTTCCTAACGGGTACAG-GGCATTTCTAGAGGGCAGAGTCTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCAT------GTGTTAGTCAAGTCCTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667295 126 + 220367699 CTGTTGTCAACTTTCACCTGAACGTTCCTAACGGGTACAG-GGCATTTCTAGAGGGCAGAGTCTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGCACCTCCAT------GTGTTAGTCAAGTCCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183822 126 - 130588469 CTGTTGTCAACTTTCACCTGAAGGTTCCTAACGGGTACAG-GGCATTTCTAGAGGGCAGAGTTTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTGGGTGCCTGGCACCTCCAT------GTGTTAGTCAAGTTCTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639258 132 + 155834243 CTGTTGTCAACTTTCACCTGAAAGTTCCTAAGGGGTCCAG-GGCATTTCTAGAGGACAGAGTTTGAT-AGAGCTGGAA--AAGGAGCAGTGAGTAGGTGCCTGGAACCCCCATGTGCAAGGATTGATCAAGCCCCT i calJac3.chr7 C 0 C 0 s mm10.chr4 25436133 111 - 156508116 CTGGGGTCATTTTCAACTAAAAGGCCCCTGTCTG-------GCGGTTTCTACAGGTCAGAATTTGAT-TGGGCTAAGA--GGGGAG-----AGCACTTGGCCAGGACCT----------GGGTTGGCCAGCTTCCT i mm10.chr4 I 1234 N 0 s canFam3.chr2 15012213 131 - 85426708 TTGTTGTTACCTTCAAGTGGAAAGTTCCTCACTGGTGCAG-GGCATTCCTGGGGGAGAGCACTGGGT-GGAGCCGGGA--AAGGAGCGGCCAGGAGGTGCCTGG-ACCTGGGTGGGGTGGGGTTGGCCAAACCTCT i canFam3.chr2 C 0 C 0 a score=2177231.000000 s hg38.chr1_KI270760v1_alt 72113 720 + 109528 TTCCTTTTGATTCTGTCTCCACCTACACTTCTTATCAGGAGAAAAGATCTCGCCCTAGAAAATGTCCCCTGATCCGTGATGTTGGCCTGGCACCTTGGATAGTAAGTCCCGATTGGGcagcctgggtgtcaggagccctgggttctgtcccaaccccacccactgcctggctgtggggcctgggctgcgttacacccattctctgagcctagatttGGGATTCATCCATCAGCCCATA------GAGCTCTCTGAAGGAAGAGGCAATCTCCAACCCATTCATGTGG-CCTCCAAACCTGGGACAGTCCCGCCACAGAGCAGGTGTGAATGGAGCTGTTGACCAATCCATGGGGGAGCTGCACCTTCCTGCTCTAACCTTCTAGGATCAGGGCCATGTGTGATA-TGACAGGGACAACTGCAGTTCCCTCTGTCCACCCTGAGAGCCTCCTGGAGGCCTCAACCCCAGGTTGCAGCAGCAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGCTGCACTGCAGAGGCCTCAGTTTACACACACTGTCTATCTCTGTTGAAGGCTCGCTGAGCCACAATCAGACTGTAGGGTGAGAAAAAGT-CCCCCCAAAAGCTTAACGCTTTACTCTCCAGCTGCAGCAGACCTGGGCAGCCAACGTCAGGGACTC--TC--CTCAGTTTTCTCATTGCTG----------------------ACAATGATG--------------AGGGGGCCACGCACGGGGAAAAGACTCAAA s panTro4.chr1 30508641 720 + 228333871 TTCCTTTTGATTCTGTCTCCACCTACACTTCTTATCAGGAGAAAAGATCTCGCCCTAGAAAATGTCCCCTGATCCCTGATGTTGGCCTGGCACCTTGGATAGTAAGTCCCGATTGGGcagcctgggtgtcaggagccctgggttctgtcccaaccccacccactgcctgactgtggggcctgggctgcgttacacccattctctgagcctagatttGGGATTCATCCATCAGCCCATA------GAGCTCTCTGAAGGAAGAGGCAATCTCCAACCCATTCATGTGG-CCTCCAAACCTGGGACAGTCCCGCCACAGAGCAGGTGTGAATGGAGCTGTTGACCAACCCGTGGGGGAGCTGCACCTTCCTGCTCTAACCTTCTAGAATCAGGGCCATGTGTGATA-TGACAGGGACAACTGCAGTTCCCTCTGTCCACCCTGAGAGCCTCCTGGAGGCCTCAACCCCAGGTTGCAGCAGCAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGCTGCATTGCAGAGGCCTCAGTTTACACACACTGTCTATCTCTGTTGAAGGCTCGCTGAGCCACAATCAGACTGTAGGATGAGAAAAAGT-CCCCCCGAAAGCTTAACCCTTTACTCTCCAGCTGCAGCAGACCTGGGCAGCCAACGTCAGGGACTC--TC--CTCAGTTTTCTCATTGCAG----------------------ACAATGATG--------------AGGGGGCCATGCACGGGGAAAAGACTCAAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30097808 726 - 229942017 TTCCTTTTGATTCTGTCTCCATCTACACTTTTTATCAGGAGAAAAGATCTTGCCCTAGAAAATGTCCCC-GATCCCTGATGTTGGCCTGGCACCTTGGATAGTAAGTCCTGATTGGGCAgcctgggtgtcaggagccctgggttctgtcccaaccccacccactgcctggttgtggggcctgggctgagttacacccattctctgagcctggatttgggattcatccatcagcgcatagactgtgagctctctgaaggaagaggcaatctccaacccattcatgtgg-cttccaaacctgggacagtcccgccacagagcaggtgTGAATGGGGCTGTTGACCAATCTGTGGGGGAGCTGCACCTTCCTGCTGTAATCTTCTGGGATCAGGGCCGTGTGTGATACTGACAGGGACAACTGCAGTTCCCTCTGTCCACCCTGAGAGCCTCCTGGAGGCCTCAACCCCAGGTGAGAGCAGCAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGCTGCACTGCAGAGGCCTCAGTTCACACACAGTGTCTATCTCTGTTGAAGGCTCACTGAGCCACAAGCAGACTGTAGGGTGAGAAAAATT-CCCCCCAAAAGCTTAACCCTTTACTCTCCAGCTGCAGCTGACCTGGGCAGCCAAGGTCAGGGGCTC--TC--CTCAGTTTTCTCATTGCAG----------------------GCAATGATG--------------AGGGGACCATGCACAGGGAAAAGACTCAAA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 558432 731 - 28733288 TTCCTTCTGGTTCTGTCTCCGTGCACGCTTCTCATCACAAGTCAGGGTCTTGCCCTGGAAAACATCTCCCGACCCCTCTTGCTGGCCTGGCACC-TGCACAGTGAGTCCTGGTCAGGcagcccgggtgtcaggaaccctgggctctgtgccaaccctgtctgctgtctggctgtgggacctgggctgatttatgcccactctctgggcc-AAATCTGTGATTCATCCACCAGcccatagactgtgaactccccgagggaaagggcgatgtccaacccatccatgtgg-cccccaagcccaggacaggcctggcatacagcaggtgtccaTGGGGCTGTTGACCA----GTGTGGGAGTGGCGCCTTTCTGCTCTAACCTCCCAGGATCTGGGCCATTCATGATGCTGACAGGGACAGCTGCAATTCCTTCTGTCCCCCGCAACAGCCTCCTGGAGGCCCCGGCCCGATGCTAGAGCAGCAGGAAAGCTCACAGGAAGAGATTTCACACGGAGACTTTGAGGCAGAGGCTTCAGTTCGCACACAGCCTCTATCTCTGTTGAAGGTTCACTGAGCCACAATTAGACTACAGGGTGAGGACAA---TCCCCCAAAGGCTCAACCCTTTACTCTCCAGCTGCAGCTGACCTGGG----CAAGATTTGAAACTCTTTC--CTTAGTTTATTGGTGTCTGTGGCAGGGGTGAGGGAGGAAGAGCAATGATG--------------AGGAGCCaa--------gacaagaatcaaa i nomLeu3.chr24 C 0 I 664 s rheMac3.chr1 33392785 697 + 229590362 TTCCTTTAGATTCTGTCTCCATCTGTATTTCTTATCAGGGGAAAAGATCTTGCCCTAGAAAATGTCCACTGATCCCTGATGTTGGCCTGGCGCCTTGGATAGTAAGTCCTGATTGGGcagcctgggtgccaggagccctgggttctgtcccaaccccacccactgcctggctgtgggacctgggctgagtgacaccccctctctgagcccagattTGGGATTCATCCATCAGcccatagactgtgagctctctgaaggaagaggcaatctccaacccattcatgtgg-cccccaaagctgggacagtcctgccacagagcaggtgTGAATGGGGCTGTTGACCAATCCGTGTGGGAGCTGCACCTTCCTGCTCTAACCTTCTGGGATCAGGGCCATGTGCGATACTGACAGGGAAAA-------------------------------CCTGGAGGCCTCAACCCCAGGTTAGAGCAGTAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGCTGCACTGCAGAGGCCTCAGTTCGCACACAGCCTCTATCTCTGTTGAAGGCTCGCTGAGCCACAGTCAGATTGTAGGGTAAGAAAAATTCCCCCCCCAAAGCTTAACCCTTTACTCTCCAGCTGCAGCTGACCTGGGCAGCCAAGATCAGGGACTC--TC--TTCAGTTTTCTCATGGCAG----------------------GCAATGATG--------------AGGGGACAATGCATGGGGACAAGACTCAAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29904023 696 - 227556264 TTCCTTTAGATTCTGTCTCCATCTGTATTTCTTATCAGGGGAAAAGATCTTGCCCTAGAAAATGTCCACTGATCCCTGATGTTGGCCTGGCGCCTTGGATAGTAAGTCCTGATTGGGcagcctgggtgccaggagccctgggttctgtcccaaccccacccactgcctggctgtgggacctgggctgagtgacaccccctctctgagcccagattTGGGATTCATCCATCAGcccatagactgtgagctctctgaaggaagaggcaatctccaacccattcatgtgg-cccccaaagctgggacagtcctgccacagagcaggtgTGAATGGGGCTGTTGACCAATCCGTGTGGGAGCTGCACCTTCCTGCTCTAACCTTCTGGGATCAGGGCCATGTGCGATACTGACAGGGACAA-------------------------------CCTGGAGGCCTCAACCCCAGGTTAGAGCAGTAGGAAATCTTGCAAGATGAAATTTCCTGTGCAGGCTGCACTGCAGAGGCCTCAGTTCGCACACAGCCTCTATCTCTGTTGAAGGCTCGCTGAGCCACAGCCAGATTGTAGGGTAAGAAAAATT-CCCCCCCAAAGCTTAACCCTTTACTCTCCAGCTGCAGCTGACCTGGGCAGCCAAGATCAGGGACTC--TC--TTCAGTTTTCTCATGGCAG----------------------GCAATGATG--------------AGGGGACCATGCATGGGGACAAGACTCAAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32667421 697 + 220367699 TTCCTTTAGATTCTGtctccatctgtatttcttatcAGGGGAAAAGATCTTGCCCTAGAAAATGTCCACTGATCCCTGATGTTGGCCTGGCGCCTTGGATAGTAAGTCCTGATTGGGCAGTCTGGGTGCCAGGAGCCCTGGGTTCTGTCCCAACCCCACCCACTGCCTGGCTGTGGGACCCGGGCTGAGTGACACCCCCTCTCTGAGCCCAGATTTGGGATTCATCCATCAGCCCATAGACTGTGAGCTCTCTGAAGGAAGAGGCAATCTCCAACCCATTCATGTGGCCCCCCAAAGCTGGGACAGTCCTGCCACAGAGCAGGTGTGAATGGGGCTGTTGACCAATCCGTGTGGGAGCTGCACCTTCCTGCTCTAACCTTCTGGGATCAGGGCCATGTGCGATACTGACAGGGACAA-------------------------------CCTGGAGGCCTCAACCCCAGGTTAGAGCAGTAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGTTGCACTGCAGAGGCCTCAGTTCGCACACAGCCTCTATCTCTGTTGAAGGCTCGCTGAGCCACAGTCAGATTGTAGGGTAAGAAAAATT-CCCCGCCAAAGCTTAACCCTTTACTCTCCAGCTGCAGCTGACCTGGGCAGCCAAGATCAGGGActc--tc--ttcagttttctcatggCAG----------------------GCAATGATG--------------AGGGGACCATGCATGGGGACAAgactcaaa i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28183948 696 - 130588469 TTCCTTTAGATTCTGTCTCCATCTGTATTTCTTATCAGGGGAAAAGATCTTGCCCTAGAAAATGTCCACTGATTCCTGATGTTGGCCTGGCGCCTTGGATAGTAAGTCCTGATTGGGcagcctgggtgccaggagccctgggttctgtcccaaccccacccactgcctggctgtgggacctgggctgagtgacacgccctctctgagcctagatttGGGATTCATCCATCAGcccatagactgtgagctctctgaaggaagaggcaatctccaacccattcatgtgg-cccccaaagctgggacagtcctgccacagagcaggtgTGAATGGGGCTGTTGACCAATCCGTGTGGGAGCTGCACCTTCCTGCTCTAACCTTCTAGGATCAGGGCCATGTGCGATACTGACAGGGACAA-------------------------------CCTGGAGGCCTCAACCCCAGGTTAGAGCAGCAGGAAATCTTGCAAGATGAAATTTCCTATGCAGGCTGCACTGCAGAGGCCTCAGTTCGCACACAGCCTCTATCTCTGTTGAAGGCTCGCTGAGCCACAATCAGATTGTAGGGTAAGAAAAAAT-CCCCCCCAAAGCTTAACCCTTTACTCTCCAGCTGCAACTGACCTGGGCAGCCAAGATCAGGGACTC--TC--TTCAGTTTTCTCATGGCAG----------------------GCAATGATG--------------AGGGGGCCATGCACGGGGACAAGACTCAAA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64639390 721 + 155834243 TTCCTTTTGATTCCGTCTCCATCTACACTTCCTGTCAGGAGAAAAGATCTTGCCCTGGAAAATGCCTCCTGACCCCTGATGTTGGCCTGGCACC-TGCATAGCAAGTCCTGGTCAGGcagcctgggtgttaggagcgctggcttctgtcccatccctgcccactgcctagctgggaggcctgggctgagttacacctactctctgagcctagatttGTGATTCATCCATCAGC-CAtagactgtgaggcctctgagggaagaggcaatctcctacccattcgtgtggccccccaaagctggtacaGTCCTGCCACAGAGCAGGTGTGAATAGGGCTGTTGACCAATCCGTGTGGGAGCTGCACCTTCCTGCTCTCACCTCCTAGGATCAGGGCCATGTGTGATACTGACAGGGACAGCTGCAGTTCCCTCTGTCCACCCGGAGAGCCTCCTGGAGACCTCAACCCCAGGACAGAGCAGGAGGAAATCTTGCAAGAAGAAATTTCCTATGCAGGCTACACTGCAGAGGCCTCAGTTCAAACACAGCATCTATCTCTGTTGAAGGCTCGCTGAGCCAC----AGATTGTAGGGTGAGAAAAATT--CCCCCAAAAGCTCAACCCTTTACTCTCCAGCTGCAGCCGACCTGGGCAGCCAAGGTCAGGAACTC--TC--CTCAGTTTTCTCATTGCAG----------------------GCAATGATG--------------AGGGGGCCACGCATGGGGACAAGACTCAAA i calJac3.chr7 C 0 I 74 s canFam3.chr2 15012344 713 - 85426708 TTCCTTTGGATTCCACCTTCATGTACAGTTCCTATCATGAGGGAAGATCTTTCCCCAGGAAACATCTCCTGACCCCTAACACTGGCATGGCACC-TGGAT-GCAAGTCCTGGTCGGGTAGCCC-GGCATTAGGAGTCCTGGGTTCTAGCATAACCGAGCCCCCTGTCTGACTGTAAGGCCCG----------CGCACCCTTTCTGGGCCTCTACTGGTGATTCATCCACCAGCCCCCAGC---tgagctccccaaggggaggggtgatgaccaagccaaccctgcag-gcccagaacccaggacaggcctggcacagagcaggtgtcaatgggcctgttgaCCAGTCAATGTGGGAACTGTGCCTTCCTCAACTAACCTCCCATGGTCAGGACCATGTGTGACATTAACAGGGACTAGTTGCTGTGCCTCTGTCGTCCCCAAGAGCCTCCTGAAAACCCCAGCCCCAAGTTAGAGTAGCAGGAA------------GAGATTTAGCATTCAGGATGCATGGTGGCAGCCTCAGCTCACACAGAATCTCTAGTGCTGTTGAAGGCTCACTACGCCACAATTATACTGCAGGGTAAGAAAAG---TCACCCCAGAGCTCAGTCATGTACTTTTTAACTGCTGCTGACCTAGGCAGCCAAGCTCTGGGATTC--TCCGCTCAGTCTGCTCATTAGTG----------------------GGGGTGAAGGAGAAAGTCAAAATAAGGGCCTGTGCCTGGGGACAAGACTGAAG i canFam3.chr2 C 0 C 0 a score=551971.000000 s hg38.chr1_KI270760v1_alt 72833 184 + 109528 GAATAAAATAAACCCATGGGGTTCAGCCCAG-TCGATTCCTTAAAACCAGTA-AGCCAGTGCCCTGCCCTGCAGTGTAGTGTGGGCTGCACGTCTCAGTGCTCAGAGGGTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCAGGGAAGGCAGAGGTGGGAGCACCCACCTTCTCCTCTAGGGAGA s panTro4.chr1 30509361 184 + 228333871 GAATAAAATAAACCCATGGGGTTCAGCCCAG-TCGATTCCTTAAAACCAGTA-AGCCAGTGCCCTGCCCTGCAGTGTAGTGTGGGCTGCACGTCTCAGTGCTCAGAGGGTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCAGGGAAGGCAGAGGTGGGAGCACCCACCTTCTCCTCTAGGGAGA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30098534 185 - 229942017 GAATAAAATAAACCCATGGGGTTCAGCCCAGCTCGATTCCTTAAAACCAGCA-AGCCAGTGCCCTGCCCTGCAGTGTGGTGTGGGCTGCACCCCTGAGTGCTCAGAGGGTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCTTGGAAGGCAGAGGTGGGAGCACCCACCTTCTCCCCTAGGGAGA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 559827 188 - 28733288 aaaagaaacaaaTCCATGGGGTTCAGGTAATGTTTATTCCTTAACAACAGCAGAGCCACTCCTCTGCCGTATTGGGTGGCATGGGCTGAACCTCAGATTGTTCAGAGGATGAGGACCTGTGTGTCTGTATTCACAGGCAGGAGCAGAGAAGGCAGGGGTGGAAAGACCCACTTTCTCCCACGGGAAGA i nomLeu3.chr24 I 664 I 94 s rheMac3.chr1 33393482 185 + 229590362 GAATAAAATAAACCCATGGGATTCAGCCCAGGTTGATTCCTTAAAACCAGCA-AGCCAGTGCCCTGCCCTGCAGTGTGGTGTGGGCTGCACCTCTGAGTGCTCAGAGGCTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCAGGGAAGGCAGACGTGGGAGCACCCACCTTCTCCCCTGGGGAGA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29904719 185 - 227556264 GAATAAAATAAACCCATGGGGTTCAGCCCAGGTTGATTCCTTAAAACCAGCA-AGCCAGTGCCCTGCCCTGCAGTGTGGTGTGGGCTGCACCTCTGAGTGCTCAGAGGCTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCAGGGAAGGCAGACGTGGGAGCACCCACCCTCTCCCCTGGGGAGA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32668118 185 + 220367699 gaataaaataaacccatGGGGTTCAGCCCAGGTTGATTCCTTAAAACCAGCA-AGCCAGTGCCCTGCCCTGCAGTGTGGTGTTGGCTGCACCTCTGAGTGCTCAGAGGCTAGGGAC--ATGTGTCTGTATTCACAGGCAGGAGCAGGGAAGGCAGACGTGGGAGCACCTACCTTCTCCCCTGGGGAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28184644 185 - 130588469 GAATAAAATAAACCCATGGGGTTCAGCCCAGGTTGATTCCTTAAAACCAGCA-AGCCAGTGCCCTGCCCTGCAGTGTGGTGTGGGCTGCACCTCTGAGTGCTCAGAGGGTAGGGGC--ATGTGTCTGTATTCACAGACAGGAGCAGGGAAGGCAGACGTGGGAGCACCCACCTTCTCCCCTGGGGAGA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64640185 184 + 155834243 GAATAAAATAAACCCATGGCATTCAGCCCAGGTT-AGTCCTTAAAACCAGCAGAGCCAGTTCCCTGCCCTGCAGTGTGGTGTGGCCTGCACCTCCCAGTGCTCAGAGGGTAGGGAT--GTGTGCCTGAATTCACAGGCAGGAGCAGGGAAGGCAGAGG-GGGAGCATCCACCTTCTCCCCTTGGGAGA i calJac3.chr7 I 74 C 0 s canFam3.chr2 15013057 150 - 85426708 GAGTGAAATAAATTAGTGGGG-CCAGCCCAAGTTTAGTCCTTTAAAATGGCAGAGCCACTGCCCTGCCCTGTTGGATGGTGTGGGGTGCA--TCAGGGTGC----------AGGAC--ATGTGTCT--ATTCACAGGCCATAGCAGAGAGGGCAGGAGCAGGGACAC--------------------- i canFam3.chr2 C 0 C 0 a score=776134.000000 s hg38.chr1_KI270760v1_alt 73017 343 + 109528 ACACTGGA-GTGAGTGAGGGGCCAGAGGTCTGGGCTGGTGATCCCAGGTCCATGCTTGATTCTTCTAGAACTCAGATGTCTTTCTTGGAG--GCAGGTAGC-ATGCAGAAGTCAAGAGCCTGGAGCAGAGTACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGATTCTATCACTCATCCCTTCATTTATTCCCTCCCTAGGTTCACAAGCcagggggcttacagatgttcttggggaaggttgacaataaacagggaattacaca-aaatattttatggcccatttgtaataagggccatgaagggaaGCCAATTTCCGATGATTAAAagatgtta-gacagaa s panTro4.chr1 30509545 343 + 228333871 ACACTGGA-GTGAGTGAGGGGCCAGAGGTCTGGGCTGGTGATCCCAGGCCCATGCTTGATTCTTCTAGAACTCAGATGTCTTTCTTGGAG--GCAGGTAGC-ATGCAGAAGTCAAGAGCCTGGAGCAGAGTACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGATTCTATCACTCATCCCTTCATTTATTCCCTCCCTAGGTTCACAAGCcagggggcttacagatgttcttggggaaggttgacaataaacagggaattacaca-aaatattttatggcccatttgtaataagggccatgaagggaaGCCAATTTCCGATGATTAAAAGATGTTA-GACAGAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30098719 344 - 229942017 ACAGTGGAGGTGAGTGAGGGGCCGGAGGTCTGGGCTGGTGATCCCAGGCCCATGCTTGATTCTTCTAGAACTCAGATGCCTTTCTTGGAG--GCAGGTAGC-ATGCAGAAGTCAAGAGCCTGGAGTAGGGTACAGTAGCCTTGGGAGAGTTTAAGATTAGGAAGAG----------AGATTCTATCACTCATCCCTTCATTTATTCCCTCCCTAGGATCACAAGCcagggggcttacagatgttcttggggaaggttgacaataaacagggaattacaca-aaatattttatggcctatttgtaacaagggccatgaagggaaGCCAAATTCAGATGATTAAAAGACGTTA-GACAGAA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33393667 341 + 229590362 ACACTGGAGGGAGGTGAGGGGCCGGAGGTCTGGGCTGGTGATCCCATGCCCACGCTTGATTCTTCTAAAGCTCAGATGCGTCTCTTGGAG--GCAGGTAGT-GTGCAGAAGGCAAGAGCCTGGAGTAGGGCACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGATTCTATCACTCATTCC-TCATTTATTCCCTCTCTAGGATCAGAAGCcagggggcttacagttgttcttggggaaggttgacaataaacggggaattacaca-aaatattttatggcccagttgtaataaggaccatgaagggaaGCCAATTTCAGATGATTAAAAGATGTTA-GAC--AG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29904904 343 - 227556264 ACACTGGAGGGAGGTGAGGGGCCGGAGGTCTGGGCTGGTGATCCCATGCCCACGCTTGATTCTTCTAAAGCTCAGATGCGTCTCTTGGAG--GCAGGTAGT-GTGCAGAAGGCAAGAGCCTGGAGTAGGGCACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGATTCTATCACTCATTCC-TCATTTATTCCCTCTCTAGGATCAGAAGCcagggggcttacagttgttcttggggaaggttgacaataaacggggaattacaca-aaatattttatggcccagttgtaataaggaccatgaagggaaGCCAATTTCAGATGATTAAAAGATGTTA-GACAGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32668303 284 + 220367699 ACACTGGAGGGAGGTGAGGGGCTGGAGGTCTGGGCTGGTGATCCCATGCCCACGCTTGATTCTTCTAAAGCTCAGATGCGTCTCTTGGAG--GCAGGTAGC-GTGCAGAAGGCAAGAGCCTGGAGTAGGGCACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGATTCTATCACTCATTCC-TCATTTATTCCCTCTCTAGGATCAGAAGCCAGGGGGCTTA------------------------------------------------------------CAGTTGTAATAAGGACCATGAAGGGAAGCCAATTTCAGATGATTAAAAGATgtta-gacagag i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28184829 326 - 130588469 ACACTGGAGGGAGGTGAGGGGCCGGAGGTCTGGGCTGGTGATCCCACGCCCACGCTTGATTCTTCTAAAACTCAGGTGCCTCTCTTGGGG--GCAGGTAGC-GTGCAGAAGGCAAGAGCCTGGAGTAGGGCACAGTAGCCTTGGGAGGGTTTAAGGTTAGGAAGAG----------AGAGTCTATCACTTATTCC-TCATTTATTCCCTCTCTAGGATCAGAAGCcagggggcttacagttgttcttggggaaggttgacaataaacatggaattacaca-aaatatTTTATGGCCCAGTT-----------------GGAAAGCCAATTTCAGATGATTAAAAGATGTTA-GACAGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64640369 342 + 155834243 GCACTGGAGTGGGGTGAGGGGCCCAAAGTCTGAGCTGGTGATCTCAGGCCCACACTTGATTCTTGTAGAACTCAGATGCCTCTCGTGGA---GCAGATAGC-ATGCAGGAGGCAGGAGCCCGGAGTAGGATACAGCAGCCTTGGGAGGGTTTAGGGTTAGGAAGAG----------AGATTCTATCACTCATGCCTTCATTTATTCCCTTCCTAGGATCACAAGCAAAggggattacagttgttcttgaggaaggtagataataaaca-ggaattaaaca-aaatattttactgcccaattgtaacaactggcatgaaggaaaGCCAATTTCAGATGATTAAAAGATGTTA-GTGAGAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15013207 329 - 85426708 ------------AGTG----------GGTCTGGGCC----ATCTCAGCCCCTTCTCCAGCCTCTCTAAGACCCAAGTTCCTCTCTGAGGGCAGCGGAAGGCAGTGCAG-AGTGGGGAGCCCAGGGTGGAGTACAGTGGCCTTGAGAGGGTTTAAGGCCAGGAAGAGCCCTCGTGAAACATTCCATCAGTCATTCCTACATTTATTCCCGCTCTCATATCACCAGCAAGGAGGCTTCCAGCTACTGGCGAAGAA-GCTGACAATAAACAGAGAGTCCCACAGAAAGATACAATGGCCCAATCGTAATAAGGGTCAT--ATGGAAAGCAATTATAGATGATTAAAAAGTGTTACGGCAggg i canFam3.chr2 C 0 I 236 e nomLeu3.chr24 560015 94 - 28733288 I a score=4639348.000000 s hg38.chr1_KI270760v1_alt 73360 1809 + 109528 agagagagagtaactgacccttactttacatacatctgaacccttgaaacaagtcagcaaggcaggtgctatcagaggaagctgaggctcagagaaggtcggcaactggcccaaagccacgcagcttacaagtagtggtgttgagatcctggacaagctaggtctgtctccagagtcagtgctcctGGAACCATGCAGGAGTTCCT------------------------CCCAAGGAGAAGGCAAGGCAAGGCTACCGTGGAGCACTCAGCACCACTTCCCAACAGGATCAGACCTGGGGAAACTGACCAGCTTGGTCCGGGAG---TGTTATTCTGCCCAAGGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTCAGCAGCCCCGCAGCTTC---AGAAGATGGGCATGTCAGGGCAAGCTCTGCTTTCTGCCTCTTCGAGGAGTCTTGCTG-CCACTCAGAG--ACCTGC-TCACAGAGGCAGGAAAGTCAAGGATCTGCTTCCCCAAAGAACAGGC--TGAGCCTCACACGGCCAAATCCCAGAATggctttcaaggaagagaaccc--aggtgtgtttgtgtcctgcctccatctcttactggctgtgtgatctcaggcaaatga------ctctgtgagcctctattt-----ttcatgtgtgaaatagATTTATTCGTAATAACATACGAAGCCT--ATACTCAACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAGCTAGATCCCACAGAGCATGGTTTTCCCATCTCTGCCCCTCCATTGTGACCTCCTGGAAGTCCCCACCCATGCCTAGTCAAAGCAATGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCTGTGGCGATGAGCATTTAACTGGTTGTCCTGGGAGTCCTCAT-GATACTTTAAGAGAGATGATAGG--CTCACTCTCAGTGTGGACCAGAGGATTCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTATTCTTTGAGCCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACGAGAAAGGGATCAAACTGGGGTGA-TGGTTGACGCTTGTGTTCAGagagtcagaggagacaggccttccattccagctcaatgcctaccttaaagatggggacactgaggctcactaggggaaagggaccttaccccaatca-actccctgtcagggcagaactgacaccagaggctgggtttcctTCCTGACCACCGCACCCTCCTA--GGGGTGGACCGGCACCCTAGCTGATGataataagctgccatttctgagtgctttctaggtgcccagccttgcactgagcattttgtgagcatttgctcatgtg--cctctaataagcccacgggaagattgtat-------tattatcatcaGGTGAAAC-TGGAGACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAAGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTGTCTTAATGGTCAGGgtgccaggagctcaggtactttacaggtctcatctcatcaatattcacaccagtctccaaagggggacattgttctctctgttttgcagttgaggaaactgaggctcaaggcatttaggcatga-gtagctaaggttacaccacactaataaC---Catacccaagactgcttgggtgtttacctgtggccaggctctcttccaagtgtgatttgtgtgtgttaa-ctcacacctcacaaacctcctaatgaaggaggg---------acaacagtgattcccacgttatagaggagggaacacaagcacggagaggttaatcgacttg s panTro4.chr1 30509888 1809 + 228333871 AGAGAGAGAGTAACTGACCCTTActttacatacatcttaacccttgcaacaagtcagcaaggcagttgctatcagaggaagctgaggctcagagaaggtcggcaactggcccaaagccacgcagcttacaagacgtggtgttgagatcctggacaagctaggtctgtctccagagtcagtgctcctGGAACCATGCAGGAGTTCCT------------------------CCCAAGGAGAAGGCAAGGCAAGGCTACCGTGGAGCACTCAGCACCACTTCCCGACAGGATCAGACCTGGGGAAACTGACCAGCTTGGTCCAGGAG---TGTTATTCTGCCCAAGGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTCAGCAGCCCCGCAGCTTC---AGAAGATGGGCATGTCAGGGCAAGCTCTGCTTTCTGCCTCTTCGAGGAGTCTTGCTG-CCACTCAGAG--ACCTGC-TCACAGAGGCAGGAAAGTCAAGGATCTGCTTCCCTAAAGAACAGGC--TGAGCCTCACACGGCCAAATCCCAGAATggctttcaaggaagagaaccc--aggtgtgtttgtgtcctgcctccatctcttactggctgtgtgatctcaggcaaatga------ctctgtgagcctctattt-----ttcatgtgtgaaatagatttattcatattaACATACGAAGCCT--ATACTCAACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAACTAGACCCCACAGAGTATGGTTTTCCCATCTCTGCCCCTCCATTGTGACCTCCTGGAAGTCCCCACCCATGCCTAGTCAAAGCAATGAGCTGAATGCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCCATGGTGATGAGCATTTAACTGGTTGTCCTGGGAACCCTCAT-GATACTTTTAGAGAGATGATAGG--CTCACTCTCAGCGTGGACCAGAGGATTCAAATTACCTGCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTATTCTTTGAGCCTGCAGGAGAGGTGAGGAGA-CAGGACAAGGGTCAGACAAGAAAGGGATCAAACTGGGGTGA-TGGTTGATGCTTGTGTtcagagagtcagaggagacaggccttccattccagctcaatgcctgccttaaagatggggacactgaggctcactaggggaaagggaccttaccccaatta-actccctgtcagggcagaactgacaccagaggctgggtttcctTCCTGACCACCGCACCCTCCTA--GGGGTGGACCCACATCCTAGCTGATGataataatctgccatttctgagtgctttctaggtgcccagccttgcactgagcattttgtgagcatttgctcatgtg--cctctaataagcccacaggaagattgtat-------tattatcatcaGGTGAAAT-TGGAGACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAAGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTGTCTTAATGGTCAGGgtgccaggagctcaggtactttacagatctcatctcatcaatattcacaccagtgtccaaagggggacattgttctctctgttttgcagatgaggaaactgaggctcaaggcgtttaggcatga-gtacctaaggttacaccacactaataac---cataaccaagactgcttgggtgtttacctgtggccaggctctcttccaagtgtgatttgtgtgtgttaa-ctcagacctcacaaacctcctaatgaaggaggg---------acaacagtgattcccatgttatagaggaggaaacacaagcacggagaggttaatcgacttg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30099063 1805 - 229942017 ----AGAGAGTAACTGACCCTTActttacatacatcttaacccttgcaacaagtcagcaaggcaggtgctatcagaggaagctgaggctcagagaaggtaggcaactggcccaaagccaagcagctaacaagtggtggtgttgagatcctggacaagctaggtctgtctccagagtcagtgctcctGGAACCATGCAGGAGTTCCT------------------------CCCAAGGAGAAGGC-AGGCAAGGCTACCGTGGAGCACTCAGCACCACTTCCCAACAGGACCAGACCTGGTGAAACTGACCAGCTTGGTCCTTGAG---TGTTATTCTGCCTAAGAACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAAGCTTTCTAGCTCAGCAGCCCCACAGTTTC---AGAAGATGGGCATGTCAGGGCAAGCTCTGCTTTCTTCTTCTTCGAGGAGTCTTGATG-CCACTCAGAG--ACCTGC-TCACAGAGGCAGAAAAGTCAGGGATCTGCTTCCCCAAAGAACAGGC--TGAGCCTCACACGGCCAAATCCCAGAATggctttcaaggaagagaaccc--aggtgtgtttgtgccctgccttcatctcttactggctatgtgatctcaggcaaatga------ctctgtgagcctctattt-----ttcatatgtgaaatagatttattcgtaataACATATGAAGCCT--ATAGTCAACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAACTAGATCCCACAGAGTATGGTTTTCCCATCTCTGCCCCTCCATTGTGATGTCCTAGAAGTCCCCACCCATGCCTAGTCAAAGCAATGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCCATGGTGATGAGTATTTAACTGGTTGTCCTGGGAACCCTCAT-GATACTCTTAGAGAGATGATAGG--CTCACTCTCAGTGTGGACCAGAGGATTCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTATCCTTTGAGTCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACAAGAAAGGGATCAACCTGGGGTGA-TGGTTGAGGCTTGTGTTCAGagagtcagaggagacaggccttccattccagctcaatgtcgaccttaaagatgggcacactgaggctcactagggcaaagggacctta-cccagtca-actccctgtcagggcagaactgacaccagaggctgggtttcctCCCTGACCACTGCACCCTCCTA--CGGGTGGACCCACATCCTAGCTGATGataataagctcctatttctgagtgttgtctaggtgcccagccttgcactgagcattttgcgagcatttgttcatgtgatcctctaataaccccacgggaagattatat-------tactatcatcaggtgaaac-tggagACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAAGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTGTCTTAATGGTCAGGgtgccaggagctcaggtactttacagatctcatctcatcaatattcacaccagtctccaaagggggacattgttctctccattttgcagatgaggaaactgaggctcaaggcgtttaggcatga-gtacctaaggttacaccacaataataac---catacccaagactgcttgggtgtttacctgtggccaggctctcttccaagtgtgatttgtgtgtgttaa-ctcagacctcacaaacctcctaatgaaggagga---------acaacagtgattcccactttatagaggaggaaacacaagcatggagaggttaatcgacttg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33394008 1806 + 229590362 --AGAGAGAGTAATTGACacttattttacctacatcttaacccttgcaacaagttggcaaggcaggtgctatccgaggaagctgaggctcagagaaagtcggcaacgggctcaaaaccacacagcttacaagtggtggtgttgagatcctggacaagctaggtctgtccccagagtcagtgctcctggaaccacACAGGAGTTCCT------------------------CGCAAGGAGAAGGCAAGGCAAGGCTCCTGTGGAGCACTCAGCACCGCTTCCCGACAGGACCAGACCTGGGGAAACTGACCAGCTTGTTCCGGGAG---TGTTATTCTGCACAAAGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTTGGGAGCCCCATAGTTTC---AGGAGATGGGCATGTCAGGGCGAGCTCTGCTTTCTGCCTCTTCGAGGAGACTTGCTG-TCACTCAGAG--ACCTGT-CCACAGAGGCAGGAAAGTCAGGGGTCTGCTTCCCCGAAGGGCAGAC--TGAGCCTCACACGGTCAAATCCCAGAAtggctttcgaggaagagagccc--gggtgtatttgtgtcctgcctccatctcttactggctgtgcgatctcaggcaaatga------ctctgtgagcctctattt----cttcatatgtaaaatggatttactcataatgacatacgaagcct--acactcaACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAATTAGATCCCATAGAGTGTGGTTTTCCCATCTCTGCCCCTCCATTGTGACCTCCTAGAAGCCCCCACCCATGCCTAGTCAAAGCAAGGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCAGTAGTGATGAGCATTGAACTGTTTGTCCTGGGGACCCTCACGGATACTCTTAGAGAGATGATAGAGTCTCACTCTCAGTGTGGACCAGAGGATTCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTACTCTTTGAGTCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACAAGAAAGGGATCAACCTGG-------GGTTGAGGCTTGTGTTCAGagagtctgaggagacaggccttccattccagctcaatgcctcccttaaagatggggactctgaggctcactaggggaaaggggtcttaccccaatca-gctccctgttagggcagaactgacaccagaggctgggtttcctCCCTGACCACTGCACCCTCCTA--GGGGTTGACCCACATCCTAGCTGATaataataagctcccatttctgagtgctttctaggtgcccagacttccactgagcattttgtgagcatttgctcatgtgatcctctaataaccccacaagaagattgtat-------tattatcatcaGGTGAAAC-TGGAGACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAGGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTGTCTTAATGGGTAGGgtgccaggaggtcgggtactttacagatctcatctcatcaatattcacaccagtctccaaagggggacattattctctctgctttgcagatgaggaaactgaggctcaaggagtttaggcatga-gtacctaaggttacaccacactgataac---cacacctaagactgcttgggtgtttacctgcggccaggctctcttccaagtgtgatttgtgtgtgttaa-ctcagacctcac-aaccacctaataaaggaggg---------acaacggtgattcccactttacagaggaggaaacacaagcccggagaggttaatcaacttg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29905247 1797 - 227556264 --AGAGAGAGTAATTGACacttattttacctacatcttaacccttgcaacaagttggcaaggcaggtgctatccgaggaagctgaggctcagagaaagtcggcaactgacccaaaaccacacagcttacaagtggtggtgttgagatcctggacaagctaggtctgtccccagagtcagtgctcctggaaccacACAGGAGTTCCT------------------------CGCAAGGAGAAGGCAAGGCAAGGCTCCTGTGGAGCACTCAGCACCGCTTCCCGACAGGACCAGACCTGGGGCAACTGACCAGCTTGGTCCGGGAG---TGTTATTCTGCACAAAGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTTGGGAGCCCCATAGTTTC---AGGAGATGGGCATGTCAGGGCGAGCTCTGCTTTCTGCCTCTTCGAGGAGACTTGCTG-TCACTCAGAG--ACCTGT-CCACAGAGGCAGGAAAGTCAGGGGTCTGCTTCCCCGAAGGGCAGAC--TGAGCCTCACACGGTCAAATCCCAGAAtggctttcgaggaagagagccc--aggtgtatttgtgtcctgcctccatctcttactggctgtgcgatctcaggcaaatga------ctctgtgagcctctattt----cttcatatgtaaaatggatttactcataatgacatacgaagcct--acactcaACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAATTAGATCCCATAGAGTGTGGTTTTCCCGTCTCTGCCCCTCCATTGTGACCTCCTAGAAGCCCCCACCCATGCCTAGTCAAAGCAAGGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCAGTAGTGATGAGCATTGAACTGTTTGTCCTGGGGACCCTCATGGATACTCTTAGAGAGATGATAGAGTCTCACTCTCAGTGTGGACCAGAGGATTCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTACTCTTTGAGTCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACAAGAAAGGGATCAACCTGG-------GGTTGAGGCTTGTGTTCAGAGAGTCAGAGGAGACAGGCCTTCCATTCCAGCTCAATGCCTCCCTTAAAGATGG---------GGCTCACTAGGGGAAAGGGGTCTTACCCCAATCA-GCTCCCTGTTAGGGCAGAACTGACACCAGAGGCTGGGTTTCCTCCCTGACCACTGCACCCTCCTA--GGGGTTGACCCACATCCTAGCTGATaataataagctcccatttctgagtgctttctaggtgcccagacttccactgagcattttgtgagcatttgctcatgtgatcctctaataaccccacaagaagattgtat-------tattatcatcaGGTGAAAC-TGGAGACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAGGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTGTCTTAATGGGTAGGGTGCCAGGAGGTCGGgtactttacagatctcatctcatcaatattcacaccagtctccaaagggggacattattctctctgctttgcagatgaggaaactgaggctcaaggagtttaggcatga-gtacctaaggttacacCACACTGATAAC---CACACCTAAGACTGCttgggtgtttacctgcggccaggctctcttccaagtgtgatttgtgtgtgttaa-ctcagacctcac-aaccacctaataaaggaggg---------acaacggtgattcccactttacagaggaggaaacacaagcccggagaggttaatcaacttg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32668587 1806 + 220367699 --agagagagtaattGACACTTATTTTACCTACATCTTAACCCTTGCAACAAGTCGGCAAGGCAGGTGCTAtccaaggaagctgaggctcagagaaagtcGGCAACTGGCCCAAAACCACACAGCTTACAAGTGGTGGTGTTGAGATCCTGGACAAGCTAGGTCTGTCCCCAGAGTCAGTGCTCCTGGAACCACACAGGAGTTCCT------------------------CGCAAGGAGAAGGCAAGGCAAGGCTCCTGTGGAGCACTCAGCACCACTTCCCGACAGGACCAGACCTGGGGAAACTGACCAGCTTGGTCCGGGAG---TGTTATTCTGCACAAGGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTCGGGAGCCCCACAGTTTC---AGGAGATGAGCATGTCAGGGCGAGCTCTGCTTTCTGCCTCTTCGAGGAGACTTGCTG-TCACTCAGAGACACCTGT-CCACAGAGGCAGGAAAGTCAGGGATCTGCTTCCCCGAAGGGCAGAC--TGAGCCTCACACGGTCAAATCCCAGAATGGCTTTCGAGGAAGAGAGCCC--AGGTGTGTTTGTGTCCTGCCTCCATCTCTTACTGGCTGTGCAATCTCAGGCAAATGA------CTCTGTGAGCctctattt----tttcatatgtaaaatggattTACTCATAATGACATACGAAGCCT--ACACTCAACACA----TGtggatttcctttctcttctactGTCAATTAGATCCCATAGAATGTGGTTTTCCCACCTCTGCCCCTCCATTGTGACCTACTAGAAGCCCCCACCCATGCCTAGTCAAAGCAAGGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTGAGGGTTTCAATAGTGATGAGCATTGAACTGTTTGTCCTGGGGACCCTCATGGATACTCTTAGAGAgatgatagagtctcactctcagtGTGGACCAGAGGATTCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTACTCTTTGAGTCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACAAGAAAGGGATCAACCTGG-------GGTTGAGGCTTGTGTTCAGACAGTCAGAGGAGACAGGCCTTCCATTCCAGCTCAATGCCTCCCTTAAAGATGGGGACTCTGAGGCTCACTAGGGGAAAGGGGCCTTACCCCAATCA-GCTCCCTGTTAGGGCAGAACTGACACCAGAGGCTGGGTTTCCTCCCTGACCACTGCACCCTCCAA--GGGGTTGACCCACATCCTAGCTGATAATAATAAGCTCCCATTTCTGAGTGCTTTCTAGGTGCCCAGACTTCCACTGAGCATTTTGTGAGCATTTGCTCATGTGATCCTCTAATAACCCCACAAGAAGATTGTAT-------TATTATCATCAGGTGAAAC-TGGAGACAATTGGATGT----------TTGCGAGTGACAGGTAGATAATGAGTCATTGGCATAGAGGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCATGTG--TTAATGGGTAGGGTGCCAGGAGGTCAGGTACTTTACAGATCTCATCTCATCAATATTCACACCAGTCTCCAAAGGGGGACATTATTCTCTctgctttgcagatgaggaaactgaggctcaaggagtTTAGGCATGA-GTACCTAAGGTTACACCACACTGATAAC---CACACCTAAGACTGCTTGGGTGTTTACCTGCGGCCAGGCTCTCTTCCAAGTGTGATTTGTGTGTGTTAA-CTCAGACCTCAC-AACCACCTAATAAAGGAGGG---------ACAACGGTgattcccactttacagaggaggaaacacaaGCCCGGAGAGGTTGATCAACTTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28185155 1800 - 130588469 --AGAGAGAGTAATTGACAC----TttacctacatcttaacccttgcaacaagtcggcaaggcaggtgctatccgaggaagctgaggctcagagaaggtcagcaactggcccaaaactacacagcttacaagtggtggtgttgagatcctggacaagctaggtctgtccccagagtcagtgctcctggaaccacGCAGGAGTTCCT------------------------CCCAAGGAGAAGGCAAGGCAAGGCTCCTGTGGGGCACTCAGCACCACTTCCCGACAGGACCAGACCTGGGGAAACTGACCAGCTTGGTCCGGGAG---TGTTATTCTGCACAAGGACCAGTCTAGAGCTGGATTTAGTTTCTAGAAGAATCTTTCTAGCTCAGCAGCCCCACAGTTTC---AGGAGATGGACATGTCAGGGTGAGTGCTGCTTTCTGCCTCTTCGAGGAGATTTGCTG-CCACTCAGAG--ACCTGT-CCACAGAGGCAGGAAAGTCAGGGATCTGCTTCCCCGAAGGGCAGAC--TGAGCCTCACACAGTCAAATCCCAGAAtggctttcgaggaagagaaccc--aggtgtgtttgtgtcctgcctccatctcttactggctgtgcgatctcaggcaaatga------ctctgtgagcctctattt----tttcatatgtaaaatggatttactcataatgacatacgaagcct--acactcaACACA----TGTGGATTTCCTTTCTCTTCTACTGTCAACTAGACCCCATAGAGTATGGTTTTCCCGTCTCTGCCCCTCCATTGTGACCTCCTAGAAGCCCCCACCCATGCCTAGTCAAAGCAAGGAGCTGAATCCAGACTGAAATGAAGCTAATTGGAGAGTGGTAAGGGTTTCCATGGTGATGAGCATTGAACTGTTTGTCCTGGGGACCCTCATGGATACTCTT--AGAGATGATAGAGTCTCACTCTCAGTGTGGACCAGAGGATTCAAATGACTTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTACTCTTTGAGTCTACAGCAGAGGTGAGGAGA-CAGGACAAGGGCCAGACAAGAAAGGGATCAACCTGG-------GGTTGAGGCTTGTGTTCAGagagtcagaggagacaggccttccattccagctcaatgcctaccttaaagatggggactctgaggctcactaggggaaaggggtcttaccccaatca-actccctgttagggcagaactgacaccagaggctgggtttcctCCGTGACCACTACACCCTCCTA--GGGGTTGACCCACATCCTAGCTGATGataataagctcccatttctgagtgctttctaggtgcccagacttccactgagcattttgtgagcatttgctcatgtgatcctctaataaccccacaagaagattgtat-------tattatcatcaGGTGAAAC-TGGAGACAATTGGATGT----------TTGTGAGTGACAGGTAGATAATGAGTCATTGGCATAGAAGTAGGGGCTGGAGACAAAGCTTACAGTCCCACCAGGTGTCTTAATGGGTAGGgtgccaggaggtcaggtactttacagatctcatctcgtcaatattcacaccagtctccaaagggggacattgttctctatcctttgcagatgaggaaactgaggctcaaggagtttagagatga-gtacctaaggttacacCACACTGATaac---gacacctaagactgcttgggtgtttacctgcagccaggctgtcttgcaagtgtgatttgtgtgtgttaa-ctcagacctcac-aaccacctaataaaggaggg---------acaacggtgattcccactttactgaggaggaaacacaagcccagagaggttaatcaacttg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64640711 1796 + 155834243 --AAAGAGAGTAATTGACAc--attttacatacatcttaacccttacaaccagtcagcaaggcaggtgctctcagaggaagctgaacctcagagaaggt-ggcaactggcgcaaagccatgcgtcttacaagtggtagcgttgagatcctggacaagctaggtgtgtccccagagccggtgcacctggaaccacgctgGAGTTCCT------------------------CCCAGGGAGA-----AGGCAAGGCTTCCATGGAGCAGTCAGCACAGCATCCCCACAGGACCAGACCTGGAGAAACTGACCAGCTTGGTCCAGGAG---TGTTACTCTACACAAGGACCAGTCTGGAGCTGGATTTAGTTTCTAGAAGAATATTTCTAGCTCAGCAGCCCCTAAGTTTT---AAAAGATGGGCATGTCAGGGGGAACTCTGCTTTCTGA--CTGCGAACAGTCTTGCTGCCCACTCAGAG--ACCTGT-CCATGGAGGTAGGAAAGTCAGCGATCTGTTTCCCCAAAGAACAGGC--TGAGCCTCACATGGCCAAATCCCAGAATGGCTTTCAAGGAAGAGAACAC--AAGtgtgtttatatcctgcctctgtctctcactggctgtgtgatctcaggcaaatga------cgttgtgagcctgtatgt----tttcatatgtaaaacagatttactcataataacatacagagcct--acactcaACATA----TGTGGATTTCCTTTCTCTTTTACTGTCAACTAGATCCC--AGAGTATGGTTTTCCCATCTCTGCCCCTCCATTGTGACCTCCTAGAAGCCCCCATCCATGGCTAGTCACAGCAATGAGCCGAATCCAGA-TGAAATGAAGCCACCTGGAGAGTGGTGAGGGTTTCCATGGTGATGAGCATGTAACCGGTTGTCCTGGGAACCCTCCTGGATGCTCTTAGAGAGATGATAGG--CTCACTCTCAGTGTGGACCAGAGGATCCAAATGACCTCCTTGGTGTGGGACTCACCACAGGAGGTTTATTTTATTCTTTAAGTCTACAGCAGAGGTGGGGAGA-CAGGACAAGGCCCAGACAAGGAAGGCATCAACTTAGGGTGA-TGGCTAAGGCTTGTGCTC----agtcagaggagacaggccttctgttccagctccgtgcccaccttaaggatggggacactgaggcccact-ggggaaagagaccttaccccaacca-gctccctgtcagggcagaactgacaccagaggctgcatttcctCCCTGACCACTGCACCCTCCTA--GGGGTGGGCCCATATCCCAGCTGATGataataagctcccatttctgagtgcgttctaggtgcccagccttgcactggacattttgtgaacatttgcttatgtgatcctctaata-----acaggaagattgtat-------tattatcatcatgtgaaac-tggagacagttagaggt----------CTGCGA-TGGGAGGTGGATAATGAGTCATTGGTGTAGAAGTGGGGTCTGGAGACAAAGCTTATGGTCCCACCACATGTCTTAATGGACAGGgtgtcaggagctcagggactttacagatctcatctcatcaatattca-accagtctccaaaaggggacattgttctctccatttcacaggttaggaaactgaggctcaaagcatttaggcatga-atacgtaaggttacacagcACTGATAAC---CATGCCTAAGACTGCttgggtgcttacctgcagccaggctctcttccaagtgtgacttgtgtgtgctaagctcagacctcac-aaccacctaatgagtgagattagggaatcacaacagtgattcccactttacagagaaggaaacacaagcacagagaggttaatcgacttg i calJac3.chr7 C 0 I 612 s canFam3.chr2 15013772 1774 - 85426708 AAAGCAGACATAATCGACATTTATtttacaggcgtctcaatcctcgcagtaacccaggaaggcaggggctgtcacagggagccgaggctcggagaagctcgggagcttgcccaaggccgtccaggttataagtggtgaggttggggcccctgacaagctgggtctgctcccag----------------accccacaggagtgccccgcccctgctcacccgaccccCAGCCCCTGGAGA-----AGGCGAGGCTGCCGTGGGGAAGTCAGCACAAGTTCTCAACGGGACGGGATGTGGGGAGACTGAT---CTGGGTCTGAGAGTGATGTTCTTCTGCGTGAGGCCCAGTCTGGAGCCAGATTTGGTGTTTAGAGAAATCCTCCCAAATCAGCAGCCCCAAAGACTCAAGAGAAGATGGGCATGTTAGGGTGGGCTCTGCTTTCTGG--CTGTGGGGAGCCCTGCTGCTCGCCCCATG--ACCTGTGCCGTGGAAGTGGGAGAATCACAGAGCCCAGGCTCTGAAGGGCAGACTGTGGGCCTTCCACAGCCAGATCCCAGAACggctttccaggaagagagaccgtgggtaggtttgtatcctgcctctatctcctactagctgtgtgatctcaggcaaatgacccaacctctctgagccgcttttccctcctccatgaatgaagaAGACTTACTCATAACAAAATATGGAGCCTCGCTATTGGGCGTAGCCTCACGGATTTCCTTCCCCCTTTACTTTCGGCTAGACCCCATGGAGCCTCATTTTCCCATCTCTGCCCCTCTACTGGGGCATTCTAGAAGCCCCTCCCCCTGGCAAGTCAGAGCAATGAACTGACTCCAGGCTGGGATCAAACTGGCTGGAGAGCGGTGAGG----------------ACATGTAGCTGGTTGTCCTGGGAA-CCTCATGGATGCTCTTGGAGACACGACAGG--CTCACTCACAGTGTGGGTCGGGGGCCCCGGATGGCCTC---AGCTTGGG----------------------------------CTAAGGCGGGGACGGGGAGAGCAGGACAAGT------CAAGAAAGGGACAGATTGGGGGTGATTAGCTGAGTGTTATGTCcacagaatcaaggctggacagcccttcatcgcagctccagaaccgtcttgaagatggggaccctgaagctcagcagggggacggga-ctcgccctgaccacacgccccactggggcagagctggcatcagcagctgagggatc-ccctgCCCACTGCACCCCCCTAAGGGGGCAGCCCCAC-TCCCAGCTGGCCACGGTAAGCTCCCACCTCTGAGCGC-TCCCGGGCGCCCAGGCCTGCACTAG---CTCTGCAAGCCTTTGCTCATGGGG-TCTCCACTGACCCTCCAGGAGGACGGTACACTTGTGCACCATCACCAGGTGACACGTGGAGACGACGGGATGCAGGAGGCTGGATGTGCGTGGTAGGTAGACGCGGGGTCTTCCGCATAGAAGGGTTGG-TGGAGATGAATCTCTCTA-CCCACCTCAGGGCTTCACGGGCGGG--GCTGGGAGTTCaggtacttcacagacctcatcccctcccccctcacatcggtctccagaggggagggttgccctcaccattgtgcagatgagggaactgaggttcacgacgccc--gtgtgacgtgcctgaggttacccagca--ggtTACGTACATGTCTAAG-CTGCTGGGGTGCATGCCTCAGACCAGGCTCTCTGCCAAGTGTGa---------------ctcagtccacac-aaccacctcatgagggaggg---------actgccatgatgcccattttacagatgagcaaacacctgcacagggacattaagtgacttg i canFam3.chr2 I 236 I 1 e nomLeu3.chr24 560015 94 - 28733288 I a score=172850.000000 s hg38.chr1_KI270760v1_alt 75169 77 + 109528 tcaaggtcacagagcttgtc-ttggcagagccaagaatcgaccccaggccatctgatgtcagggcccatgctctaacc s panTro4.chr1 30511697 77 + 228333871 tcaaggtcacagagcttgtc-ttggcagagccaagaatcgaccccaggccatctgatgtcagggtccatgctctaacc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30100868 77 - 229942017 tcaaggtcacagagcttgtc-ttggcagagccaagaattgaccctaggccatctgatgccagggcccattctctaacc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33395814 78 + 229590362 tcaaggtcgcagagcttgtcagtggcagagccaagaatcgaccccaggccgtctgatgccagggcccatgctctaacc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907044 78 - 227556264 tcaaggtcgcagagcttgtcagtggcagagccaagaatcgaccccaggccgtctgatgccagggcccatgctctaacc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32670393 78 + 220367699 TCAAGGTCGCAGAGCTtgtcagtggcagagccaagaaTCGACCCCAGGCCGTCTGATGCCAGGGCCCATGCTCTAACC i papAnu2.chr1 C 0 M 938 s chlSab2.chr20 28186955 78 - 130588469 tcaaagtcgcagagcttgtcagtggcagagccaagaatcgaccccaggccatctgatgccagggcccatgctctaacc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643119 78 + 155834243 Tcaaggtcacagagcttatcaatggcagagccaagaatcaaccccaggccatctaatgccagagcctatgctgtaacc i calJac3.chr7 I 612 C 0 s canFam3.chr2 15015547 22 - 85426708 ccaaggtcacagacct-----GTGTCA--------------------------------------------------- i canFam3.chr2 I 1 C 0 e nomLeu3.chr24 560015 94 - 28733288 I a score=499734.000000 s hg38.chr1_KI270760v1_alt 75246 268 + 109528 cccaggttGCAGCTGCCtcacaagctgataaatgacagagcaggatccaagccccaggcagcctggttccagagctcatgccctctccagtacCCAAGGCCAGGGACTGAGGAGAGAGGCTCAGGCCAGGGCACCACCTAGGGCTTCATGGGCTGTGGTTGTCATATTCTTCAAGCTCCACTCAGACCTCAGAGGAGGATCTGCAGCCGAGGAGGCCCAAAGGGGAGGCCTGCACCCAGAACTGGTCCTGCAGTGCCCTCAGGGCAGG s panTro4.chr1 30511774 268 + 228333871 cccaggttGCAGCTGCCtcacaagctgataaatgacagagcaggatccaagccccaggcagcctggttccagagctcatgccctctccagtacCCAAGGCCAGGGACTGAGGAGACAGGCTCAGGCCAGGGCACCACCTAGGGCTGCATGGGCTGTGGTTGGTATATTCTTCAAGCTCCACTCAGACCTCAGAGGAGGATCTGCAGCAGAGGAGGCCCAATGGGGAGGCCTGCACCCAGAACTGGTCCTGCAGTGCCCCCAGGGCAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30100945 268 - 229942017 cccaggttGCAGCTGCCtcacaagctgataaatgacagagcaggatccaagccccaggcagccgggttccagagctcatgccctctccagtacCCAAGGCCAGGGACTGAGGAGAGAGGCTCAGGCCAGGGCACCAGCTAGGGCTGCATGGGATGTGGTTGGCATATTCTTCAAGCTCCACTCAGACCTCAGAGGAGGATCTGCAGCAGAGGAGGCCCAAAGGGGAGGCCTTCACCCAGAACTGGTCCTGCAGTGCCCCAAGGGCAGG i ponAbe2.chr1 C 0 I 386 s rheMac3.chr1 33395892 268 + 229590362 cccgggctgtagctgcctcacaaggtgataaatgacagagcaggatccaagccccgggcagcctggttccagagctcatgccctctccactacCCAAGACCCGGGACTGAGAAGAGAGGCTCAGGCCAGGGCACCAGCTAGGGCTGGATGGGCTGTGGTTGGCATATTCTTCAAGCTCCACTCAGACATCAAAGGAGGATCTGCAGCAGAGAAGGCCCAAAGGGGAGGCCTGCACCCAGAACTGATCCTCCAGCACCCCCAGGGCAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907122 268 - 227556264 cccaggctgtaGCTGCCtcacaaggtgataaatgacagagcaggatccaagccccaggcagcctggttccagagctcatgccctctccactacCCAAGACCCGGGACTGAGAAGAGAGGCTCAGGCCAGGGCACCAGCTAGGGCTGGATGGGCTGTGGTTGGCATATTCTTCAAGCTCCACTCAGACATCAAAGGAGGATCTGCAGCAGAGAAGGCCCAAAGGGGAGGCCTGCACCCAGAACTGATCCTCCAGCACCCCCAGGGCAGG i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28187033 268 - 130588469 CGCGGGCTGCAGCTGCCtcacaaggtgataaatggcagagcaggatccaagccccaggcagcctggttccagagctcatgccctctccactacCCAAGACCTGGGACTGAGAAGAGAGGCTCAGGCCAGGGCACCAGCTAGGGCTGGATGGGCTGTGGTTGGCATATTCTTCAAGCTCCACTCAGACATCAGAGGAGGATCTGCAGCAGAGAAGGCCCAAAGGGGAGGCCTGCACCCAGAACTGATCCTCCAGCACCACCAGAGCAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643197 264 + 155834243 -TGGGGCTGCAGCTGCCtcacaagctgataaatgacagagcaggaaccaaaccccaggcagcctggttccagagctcatgccc-ATCCAC-ACCCAAGGCCAGAGACTGAGGCAAGAGACTCAGGCCAGGGCACCAGCTAGGGCTGAATGGGCTGTGGTTGGCA-ATTCTTCAAACTCCACTCAGACTTGAGAGGAGAATCTGCTGCAGAGGAGGCCCAAAGGAGAGGCCTGCACCCAGAGCTGGTCCTCTAGCACCCCCAGGGCAGG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15015569 188 - 85426708 --CAGG-----------TCACAA----------------------------------------TGGCTCTGCCATTGGCACCCTGTCCACCACCAAAGGCGAGGGACTGAGGAGAGACGCCGAGGCC------------AGAGCTGGATGGGCTGCGGTGGGCACCCCCTTCAGGCCCAGCCAAGACCTTGAAGGAGGGCCGGGGGCA-------------GGGGAAGCCTGCG--CAGAGCTGGTCGTCAGGCACCCCCAGGGTGGG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e papAnu2.chr1 32670471 938 + 220367699 M a score=102643.000000 s hg38.chr1_KI270760v1_alt 75514 76 + 109528 GATCATGCCTGCATCTGCAGAGAGTGTGAGCTTACACAGACAtgtgggctgcagtcagcaagaccagaatcctcct s panTro4.chr1 30512042 76 + 228333871 GATCATGCCTGCATCTGCAGAGAGTGTGAGCTTACACAGACATGTGGGCTGCAGTCAGCAAGACCAGAATCCTCCT i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33396160 76 + 229590362 GACCATGCCTGCATCTGCTGAGCATGTGAGCTTACGCAGACACCTGTGCTGCAGTcaacaagaccagaatcctcct i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907390 76 - 227556264 GACCATGCCTGCATCTGCTGAGCGTGTGAGCTTACGCAGACACCTGTGCTGCAGTcaacaagaccagaatcctcct i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28187301 76 - 130588469 GACCATGCCTGCATCTGCTGAGCGTGTGAGCTTACACAGACACCTGGGCTGCAGTcaacaagaccagaattctcct i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643461 76 + 155834243 GACCATGCCTGCATCTGCTAAGAGTGTGAGCTTACACCGACACCTGGGCTGCAGTcagtggggccagaatcttcct i calJac3.chr7 C 0 C 0 s canFam3.chr2 15015757 72 - 85426708 GACCGAGCCTGAACATGCCGACAA----AGGCATTACAGACACCAGGGCCACAGTCAAGGGGGCCGATCTCCCCCT i canFam3.chr2 C 0 I 90 e nomLeu3.chr24 560015 94 - 28733288 I e ponAbe2.chr1 30101213 386 - 229942017 I e papAnu2.chr1 32670471 938 + 220367699 M a score=297551.000000 s hg38.chr1_KI270760v1_alt 75590 263 + 109528 agtgccttgttaaaatacag-attcaggccgggtgcaggggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcatgaggtcaggagttcaagaccagcctggccaagatggtgaaaccccatctctactaaaactacaaaaattagccgggcatagtggcagacacctgtaattccagctactcgggagactgaggcaggagaatagcttgaacctgggtggcagaggttgcagtgagccgagatcatg s panTro4.chr1 30512118 263 + 228333871 AGTGCCTTGTTAAAATACAG-ATTCAggccaggtgcagtggctcacacctgtaattccagcactttgggaggccgacgcgggtggatcacgaggtcaggagttcaagaccagcctggccaagatggtgaaaccccatctctactaaaactacaaaaattagccgggcatagtggcaggcacctgtaattccagctactcgggtggctgaggcaggagaatagcttgaacccgggtggcagaggttgcagtgagccgagatcatg i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33396236 258 + 229590362 ggcatcttgttaaaatacagaattaaggccgtgtgcggtggctcacacctgtaattccaccactttggggggctgaggtgggtggatcacaaggtcaggagttcaagaccagcctggtcaagatattgaaaccccatctctactaaaacgacaaaaatta------catagtgacaggctcctgtaattccagctactcaggaggctgaggcaggagaatcgcttaaacccgggtggcagcggttgcagtgagccaagatcatg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907466 257 - 227556264 ggcatcttgttaaaatacag-attcaggccaggtacggtggctcacacctgtaattccacgactttgggaggctgaggtgggtggatcacaaggtcaggagttcaagaccagcctggccaagatattgaaaccccatctctactaaaactacaaaaatta------catagtgacaggcacctataagtccagctactcaggaggctgaggcaggagaatcgcttaaacccgggtggcagaggttgcagtgagccaagatcatg i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28187377 256 - 130588469 ggcgccttgttaaaatacag-attcaggccaggtgcggtggctcacacctgtaattccagcactttgggaggctgaggtgggtggatcacgaggtcaggagttcaagaccagcctggccaagatgttgaaa-cccatctctactaaaactacaaaaatta------catagtgacaggctcctgtaattccagctactcaggaggctgaggcaggagaatcgcttaaacccgggtggcagaggttgcagtgagccaagatcatg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643537 261 + 155834243 agtgccttgttaaaatacag-attcaggccaggcgtggtggctcacacctgtaatcctagcactttgggaggtcaaggcaagtggatcacgaggtcaggagttcaagaccagcctggccaagatggtgaaacgctgtctctactgaaactac-aaaattagccaggtacagtagcaggtgcc-ataatcccaactactcagggggctgaggcaggagaatcacttgaacccaggtggcagaggtttcagggagctgagatggct i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15015829 90 - 85426708 I e ponAbe2.chr1 30101213 386 - 229942017 I e papAnu2.chr1 32670471 938 + 220367699 M a score=162134.000000 s hg38.chr1_KI270760v1_alt 75853 123 + 109528 ccactgcactccagcctgggcaacagagcaagtgagactccgtctcaacaacaa-caacaacaacaacaaaatacagattccccagactcataccagagcgaggaatcagattctcctgaggt-a s panTro4.chr1 30512381 120 + 228333871 ccactgcactccagcctgggcaacagagcaagtgagactccgtct---caacaa-caacaacaacaacaaaatacagattccccagactcataccagagcgaggaatcagattctcctgaggt-g i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30101599 117 - 229942017 ccactgcactccagcctgggcaacagagcaagcgagactccgtct------caa-caacaacaacaacaaaatacagattccccagactcataccagagcgaagaatcagattctcgtgaagt-g i ponAbe2.chr1 I 386 C 0 s rheMac3.chr1 33396494 113 + 229590362 ccactgccctccagcctgggcaacagagcaagcgagactccatct------cag----caacaacaacaaaatacagattccccagactcataccagagcgaggaatcacattctcccgaggt-- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907723 113 - 227556264 ccactgccctccagcctgggcaacagagcaagcgagactccatct------cag----caacaacaacaaaatacagattccccagactcataccagagcgaggaatcacattctcccgaggt-- i macFas5.chr1 C 0 C 0 s chlSab2.chr20 28187633 117 - 130588469 ccactgccctccagcctgggcaacagagcaagcgagactccatct------cag-caacaacaacaacaaaatacagattccccagactcacaccagagcgaggaatcagattcgcctgaggtg- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643798 97 + 155834243 ccattgcactgcagcctgagcaacag----agtgagactccatct------caaaaaataatagtaataata-----------------cataccagagcaaggaattagtttctcctgaggt-g i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15015829 90 - 85426708 I e papAnu2.chr1 32670471 938 + 220367699 M a score=513256.000000 s hg38.chr1_KI270760v1_alt 75976 221 + 109528 gggatcaggaatttgca--tttggaaagccctgcaggtaattctgaAGAAAGAATCAGACTCCAGCTCatatggtttggctgtgtccccacccaaatctcatcttgaattatacatcccataattccctcatgtcatggaagggactgggtgggagatcattgaatcatgaggtcagtttcccccatactgttctcgtggtagtgaggaagtctcacgagaga s panTro4.chr1 30512501 221 + 228333871 gggatcaggaatttgca--tttggaaagccctgcaggtaattctgaAGAAAGAATCAGACTCCAGCTCatatggtttggctgtgtccccacccaaatctcatcttgaattgtacatcccataattccctcatgtcatggaagggactgggtgggagatcattgaatcatgaggtcagtttcccccatactgttctcgtggtagtgaggaagtctcacgagaga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30101716 222 - 229942017 gggatcaggaatttgca-ttttggaaagccctgcaggtaattctgaAGAAAGAATCAGACCCCAGCTCatatggtttggctgtgtccccacccaaatctcatcttgaattgtacatcccataattccctcatgttgtggaagggactgggtgggagatcattgaatcaggaggtcagtttcccccatactgttctggtggtagtgagtaagtctcacgagagc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33396607 223 + 229590362 ggggtcaggactttgcatttttggaaagccctgcggataattctgaAGAAAGAATCAGACCCCGGCTCGtatggtttggctgtgtccccacccaaatctcatcttgaattgcacatcccatatttccctcatgttgtgggaggaactgggtgggagatcattgaatcatgaggtcagtttcccccatgctgttctcatggtagtgaaaaagtctcacgagagc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29907836 223 - 227556264 ggggtcaggactttgcatttttggaaagccctgcggataattctgaAGAAAGAATCAGACCCCGGCTCGtatggtttggctgtgtccccacccaaatctcatcttgaattgcacatcccatatttccctcatgttgtgggaggaactgggtgggagatcattgaatcatgaggtcagtttcccccatgctgttctcatggtagtgaaaaagtctcacgagagc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32671412 223 + 220367699 GGGGTCAGGACTTTGCATTTTTGGAAAGCCCTGCGGATAATTCTGAAGAAAGAATCAGACCCCGGCtcgtatggtttggctgtgtccccacccaaatctcatcttgaattgcacaTCCCATATTTccctcatgttgtgggaggaactgggtgggagatcattgaatcatgaggtcagtttcccccatgctgttctcatgggaGTGAAAAAGTCTCACGAGAGc i papAnu2.chr1 M 938 C 0 s chlSab2.chr20 28187750 222 - 130588469 gggatcaggactttgca-ttttggaaagccctgcaggtaattctgaAGAAAGAATCAGACCCCGGCTCGtatggtttgactgtgtccccacccaaatctcatcttgaattgtacatcccatatttccctcatgttgtgggaggaactgggtgggagatcattgaatcatgaggtcagtttcccccatgctgttctcgtggtagtgaaaaagtctcacgagagc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64643895 220 + 155834243 ggggtcaggaatttgca-ttttggaaagcactgcgggtaattctgaAGAAAGAATAAGACCCCAGCtgatatggtttggctgtgtccccacccaaatctcatctttaatagtacctcccataattccatcgtgttgtgggag--actgggtgggcgataattgaatcatgaggtcagtttctcccatactgttctcatggtagtgaataggtttcacaagatc i calJac3.chr7 C 0 I 342 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15015829 90 - 85426708 I a score=1665124.000000 s hg38.chr1_KI270760v1_alt 76197 730 + 109528 tgatggttttataaggggtttcccctttctcttggctctcactcttctcttgtctgcca--ccatgtgagacatgcctttcatcttctgccatgattgtgaggtctc-------atgtggaactgtgagaccagt-aaacctctttttccttgtaaattacccagccttaggtatgtctttatcagcagcgtgaaaatgcactaatacaCAAGCTGTCATCTGGGAAGCAGTATCCAAAGTCCGACTTGGACAGTCTGAGGTGTCAGACACTAAAGGTAATGGAAACCATGACCATAACAACATAGTTCCCGTGTCCAGAATTTGGCCTGTCCTCCCATGTCCCTtctcttctcagtcctcacagtgacccttaaatgaagggactcttacaatcccattttatagatgaagaaactgagactcagggtcacccagctggggagtgcggccactgggattcatactaagcctggcccagGTTTCTCTCTCCGTCCCTCTCTGCAGGAGGCCCAGAAGGCAGAGGATGAGGAAGGCAGTGGGGCTGGGTGGGGG-----------GACTCCTGCAGGGGCTTCCACCCAGATAATTGCCTCTGCCAAAACTCAGGAAACAGCCTCTGCCTCAGCTTTTCTGTTCATTCCCAAGTGGTATTTTAAGTTTCAGAAAGACCTAATAGCCTAGAAGAAGATTTGTACATGAAGAAGCATCTTTTCCTCAAGGTTATTGTAAGCACAGTTGAGGGAG s panTro4.chr1 30512722 730 + 228333871 tgatggttttataaggggtttcccctttctcttggctctcactcttctcttgtcagcca--ccatgtgagacatgcctttcatcttctgccatgattgtgaggcctc-------atgtggaactgtgagaccagt-aaacctctttttccttgtaaattacccagtcttaggtatgtctttatcagcagcgtgaaaatgccctaatacaCAAGCTGCCATCTGGGAAGCAGTATCCAAAGTCCGACTTGGACAATCTGAGGTGTCAGACACTAAAGGTAATGGAAACCATGACCATAACAACATAGTTCCCGTGTCCAGAATTTGGCCTGTCCTCCCGTGTCCCTtctcttctcagtcctcacagtgacccttaaatgaagggactcttacaatcccattttatagatgaagaaactgagactcagggtcacccagctggggagtgcggccactgggattcatactaagcctggcccagGTTTCTCTCTCCGTCCCTCTCTGCAGGAGGCCCAGAAGGCAGAGGATGAGGAAGGCAGTGGGGCTGGGTGGGGG-----------GGCTCCTGCAGGGGCTTCCACCCAGATAATTGCCTCTGCCAAAACTCAGGAAACAGCCTCTGCCTCAGCTTTTCTGTTCATTCCCAAGTGGTATTTTAAGTTTCAGAAAGACCTAATAGCCTAGAAGAAGATTTGTACATGAAGAAGCATCTTTTCCTCAAGGTTATTGTAAGCACAGCTGAGGGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30101938 730 - 229942017 taatggttttataagggatttcccctttctcttggctctcactcttctcttgtctgcca--ccatgtgagacgtgcctttcatcttctgccatgtttgtgaggcctc-------atgtggaactgtgagtccagt-aaacctctttttccttgtaaattacccagtctcaggtatgtctttatcagcagcgtgaaaatggactaatacaCCAGCTGTCATCTGGGAAGCAGTATCCAAAGTCCACCTTGGACAGTCTGAGGTGTCAGACACCAAAGGTAATGGAAACCATGACCATAGCAACATAGTTCCCATGCCCAGAATTTGGCCTGTCCTCCTGTTTCcattctcttctcagtcctcacagtgacccttaaatgaagggactcttacaatcccattttatagatgaagaaactgagactcagagTCACCCAGCTGGGGAGTGCGGCCACAGGGATTCATACTAAGCCTCGCCGAGGTTTCTCCCTCCGTCCCTCTCTGCAGGAGGCCCAGAAGGCAGAGGATGAGGAAGGCAGTGGGGCTGGGTGGGGG-----------GACTCCTGCAGGGGCTTCCACCCAGATAACTGCCTCTGCCAAAACTCAGGAAACAGCCTTTGCCTCAGCTTTTCTGTTCATTCCCAAGTGGTATTTTAAGTTTCAGAAAGACCTAATAGCCTAGAAGAAGATTTGTACATGAAGAAGCAGCTTTTCCTCAAGGTTAGTGTAAGCACAGCTGAAGGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33396830 726 + 229590362 cgatggttttgtaaggggattcccctttctcttggctct--ctcttctgttgtcggccacgcaatgtgagacgtgcctttcatcttctgccttgattctgaggcctc--------tgtggaactgtgagtccagt-aaacctctttttccttgtaaattacccagtctcagggatgtctttatcagcagcatgaaaatggaccaatacaCCAGCTGTCATCTGGGAAGCAGTATCCAAAGTCTGACTTGGACAGTCTGAGGTGTCAGACACTAAAGATAATGGAAACAATAACCACAGCAACATAGTTCCTGTGCCCAGAATTTGGCCTGCCCTCCTGTGTGCCTTCTCTTCtcagtcctcacagtgactcttaaatgaacggactcttacaatcccattttagagatgaagaaactgagactcagagtcacccagctggtgagtgcagcaactgggattcacacgaagcctagcccagGTTTCTCCTTCTGTCCCTCTCTACAGGAGGCCCAGAAGGCAGAGCATGAGGAAGGCAATGAGGCTAGGCAGGAG-----------GACTCCTGCGGGGGCTTCCACCCAGATAATTGCCTCCGCCAAAACTAAGGAAACAGCCTTTGCCTTGGTTTTTCTGTTCATTCCCAAGTGGAATTTTAAGTTTCAGAAAGACCTAATAGCCT---AGAAGATTTGTACATGAAGAAGCAGCTTTTCCTCAAGGTTAGTGTAAGCACAGCTGAGGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29908059 727 - 227556264 cgatggttttgtaaggggattcccctttctcttggctct--ctcttctgttgtcggccacgcaatgtgagacgtgcctttcatcttctgccgtgattgtgaggcctc-------gtgtggaactgtgagtccagt-aaacctctttttccttgtaaattacccagtctcagggatgtctttatcagcagcatgaaaatggaccaatacaCCAGCTGTCATCTGGGAAGCAGTATCCAAAGTCTGACTTGGACAGTCTGAGGTGTCAGACACTAAAGATAATGGAAACAATAACCACAGCAACATAGTTCCTGTGCCCAGAATTTGGCCTGCCCTCCTGTGtgccttctcttctcagtcctcacagtgactcttaaatgaacggactcttacaatcccattttagagatgaagaaactgagactcagagTCACCCAGCTGGTGAGTGCGGCAACTGGGATTCACACGAAGCCTAGCCCAGGTTTCTCCTTCTGTCCCTCTCTGCAGGAGGCCCAGAAGGCAGAGCATGAGGAAGGCAATGGGGCTGGGCAGGGG-----------GACTCCTGCGGGGGCTTCCACCCAGATAATTGCCTCCGCCAAAACTAAGGAAACAGCCTTTGCCTTGGTTTTTCTGTTCATTCCCAAGTGGAATTTTAAGTTTCAGAAAGACCTAATAGCCT---AGAAGATTTGTACATGAAGAAGCAGCTTTTCCTCAAGGTTAGTGTAAGCACAGCTGAGGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32671635 725 + 220367699 cgatggttttgtaaggggatTCCCCTTTCTCTTGGCTCT--CTCTTCTGTTGTCGGTCACGcaatgtgagacatgcctttcatcttctgccgtgattgtgaggcctc-------gtgtggaactgtgagtccagt-aaacctctttttccttgtaaattacccagtctcaggcatgtctttaccagcagcatgaaaatggactaatacaccagctGTCATCTGGGAAGCAGTATCCAAAGTCTGACTTGGACAGTCTGAGGTGTCAGACACTAAAGATAATGGAAACAATAACCATAGCAACATAGTTCCTGTGCCCAGAATTTGGCCTGCCCTCCTGTGTGCCTTCTCTTCTCAGTCCGCACAGTGACTCTTAAATGAACGGACTCTTAcaatcccattttatagatgaagaaactgagactcagggtcACCCAGCTGGTGAGTGCGGCAACTGGGATTCACACGAAGCCTAGCCCAGGTTTCTCCTTCTGTCCCTCTCTGCAGGAGGCCCAGAAGGCAGAGCATGAGGAAGGCaatggggctgggcagggg-----------gacTCCTGCGGGCGCTTCCACCCAGATAATTGCCTCCGCCAAAACTAAGGAAACAGCCTTTGCCTTGGTTTTTCTGTTCATTCCCAAGTGGAATTTTAAGTTTCAGAAAGACCTAATAGCCT---AGAAGATTTGTACATGAAGAAGCAGCTTTTCTC--AAGTTAGTGTAAGCACAGCTGAGGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28187972 727 - 130588469 tgatggttttgtaaggggattcccctttctcttggttct--ctcttctcttgtcagccacacaatgtgagacgtgcctttcatcttctgccgtgattgtgaggcctc-------gtgtggaactgtgagtccagt-aaacctctttttccttgtaaattacccagtctcagggatgtctttatcagcagcatgaaaatggactaatacaCCAGCTGTCATCTGGGAAGCAGTATCCAAAGTCTGACTTGGACGGTCTGAGGTGTCAGACACTAAAGGTAATGGAAACAATGACCATAGCAACATAGTTCCTGTGCCCAGAATTTGGCCTGCCCTCCtatgtgccttctcttctcagtcctcacagtgactcttaaatgaagggactcttacaatcccattttatagatgaagaaactgagactcagagtcacccaactggtgagtgcagcaactgggattcatactaagcctggcccaggtttctccctccgtccctctctgcAGGAGGCCCAGAAGGCAGAGCATGAGGAAGGCAATGGGGCTGGGCAGGGG-----------GACTCCTGCGGGGGCTTCCACCCAGATAATTGCCTCTGCCAAAACTAAGGAAACAGCCTTTGCCTTGGCTTTTCTGTTCATTCCCAAGTGGAATTTTAAGTTTCAGAAAGACCTAATAGCCT---AGAAGATTTGTACATGAAGAAGCAGCTTTTCCTCAAGGTTAGTGTAAGCACAGCTGAGGGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64644457 731 + 155834243 tgatggttttataaggggtttcccctttctcttggctctcactcttctcttgcctgcca--ccatgtgagatgtgcctttcaccttctgccatgatcgtgaggcctccccagccatgtggaactgtgagtacagtaaaacctctttttccctataaatta-ccagtctcaggtatgtctttatcagcagcatgaaaatggactaatacaCCAGCTGTCCTCTAGGAACCAGTATCCAAAGTCCAACTTGGACAGTCTGAGGTGTCAGACACTAAAGGTAATAG------------CAGCAACATAGTTCCCCTGCCCAGAATTTGGCCTGTCCTCCTGTGTGTCTCCTCTTCTCAGCcctcacagtgctctttaaatgaagggactcttacaatcccattttatagataaggaaactgagaccccaagtcacccagctggtgagtgcagccactgggattcacactaagcctgactcaggtttctccctccatccctctctgcAGGAGGCTCAAAAGACAGAGGGTGAGGAAGGCAGTGGGGTTCGGGGGGGGTGGGGGCAGCTGGCTTCTGCGGGGGCTTCCACCCAGATAATTG--TCTGCCAAAACTCAGGAAACAGTCTTTGCCTCGGCTTTTCTGTCCATTCCCAAGTGGGAATTTAACTTTCAGAAAGACCTAATAGCCT---AGAAGATTTGTACATGAAGAAGCGGCTTTTCCTCAAGGTTAGTGTAAGCATGGCTGAGGGAG i calJac3.chr7 I 342 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15015829 90 - 85426708 I a score=970188.000000 s hg38.chr1_KI270760v1_alt 76927 399 + 109528 CAGGAGAGATTTATGAGAAATTCTGCTGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGCTA------AAAAAAAGGCACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCCAGGCCTCCCCTCTCCATCCAGCAGGGACCTAGA-CCCCCTCCAATTACACACCTCGAGCAGTGAAATCATCATTACCCAATGGGCAGTTCACTCCATTAGTCCAAACTAATAAAGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCAAGGAAATGG--GGTGGGGCAAGGAACAAGCCACAGAATTTGGAACCATCCATCCCAG---------CACCCCATGAATTG-TGTGACAAgtgacttgaagcaaggtaccttgctgggcctcaggttcacttctt s panTro4.chr1 30513452 399 + 228333871 CAGGAGAAATTTATGAGAAATTCCGCTGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGCTG------AAAAAAAGGCACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGAGCTTGGAAGGTGCCCAGGCCTCCCCTCTCCATCCAGCAGGGACCTAGA-CCCCCTCCAATTACACACCTTGAGCAGTGAAATCATCATTACCCTATGGGCAGTTCACTCCATTAGTCCAAACTAATAAAGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGG--GGTGGGGCAAGGAACAAGCCACAGAATTTGGAACCATCCGTCCCAG---------CATCCCATGAATTG-TGTGACAAgtgacttgaagcaaggtacctcgctgggcctcaggttcacttctt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30102668 399 - 229942017 CAGGAGAGATTTATGAGAAATTCTGCCGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGCTG------AAAGAAAGGCACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCCAGGCCTCCCCTCTCCATCCAGCAGGGACCTAGA-CTCCCTCCACTTACACACCTCGAGTGGTGAAATCATCAATATCCCATGGGCAGTTCACTCCATTAGTCCAAACTAATAAAGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGG--GGTGGGGCAAGGAACAAGCCACAGAATTTGGAATCATCCATCCCAG---------CACCCCATGAATTG-TGTGACAAgtgacttgaagcaaggtacctcgctgggcctcaggttcacttctt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33397556 404 + 229590362 CAGGAGAGATTTATGAGAAATTCTTCTGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGCTGAAAAAAAAAAAAAGACACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCTAGGCCTCCCCTCTCCATCCAGCCAGGGCCTAGA--CCCCTCCACTTACACACCTCGAGCGGTGAAATCATCATTACCCCATGGGCAGTTCACTCCACTAGTCCAAACTAATAATGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGG--GGAGGGGCAAGGAACAAGCCATAGGATTTGGAACCACCCATCCTAG---------CACCCCATGAATTG-TGTGACGAGTGACTTGAAGCAAGGTACCTCGCTGGGCCTCTGGTTCACTTCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29908786 404 - 227556264 CAGGAGAGATTTATGAGAAATTCTTCTGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGCTGAAAAAAAAAAAAAGACACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCTAGGCCTCCCCTCTCCATCCAGCCAGGGCCTAGA--CCCCTCCACTTACACACCTCGAGCGGTGAAATCATCATTACCCCATGGGCAGTTCACTCCACTAGTCCAAACTAATAATGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGG--GGAGGGGCAAGGAACAAGCCATAGGATTTGGAACCACCCATCCTAG---------CACCCCATGAATTG-TGTGACGAgtgacttgaagcaaggtacctcgctgggcctctggttcacttctt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32672360 403 + 220367699 CA-GAGAGATTTATGAGAAATTC-TCTGGGTctgaaataaacaacaaac--agctcgggctgaaaaaaaaaaaagaacacactcACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCTAGGCCTCCCCTCTCCATCCAGCCAGGGCCTAGA--CCCCTCCACTTACACACCTCAAGCGGTGAAATCATCATTACCCCATGGGCAGTTCACTCCACTAGTCCAAACTAATAATGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGG--GGAGGGGCAAGGAACAAGCCATAGGATTTGGAACCACCCATCCTAG---------CACCCCATGAATTG-TGTGACGAGTGACTTGAAGCAAGGTACCTCGCTGGGCTTCTGGTTCACTTCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28188699 401 - 130588469 CAGGAGAGATTTATGAGAAATTCTTCCGGGTCTGAAATAAAC-ACAAAC--AGCTCGGGC----AAAAAAAAAAAGACACACTCACAGGAGATGCTGGCCAGATATCCTCTGGGCACAGGACCTTGGAAGGTGCCTAGGCCTCCCCTCTCCATCCAGCCAGGGCCTAGA-CCCCCTCCACTTACACACCTCGAGCAGTGAAATCATCATTACCCCATGGGCAGTTCACTCCACTAGTCCAAACTAATAATGGGAAGGTGCTGATCCTCTGATAATTTCTCTTCATCGAGGAAATGA--GGAGGGGCAAGGAACAAGCCATAGAATTTGGAACCACCCATCCTAG---------CACCCCATGAATTG-TGTGACGAgtgacttgaagcaaggtacctcgctgggcctctggttcacttctt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64645188 393 + 155834243 CAGAAGAGATTTATAAGAAATTCTGCCAGGCCTGAAATAAAC-ACAAAC--AGCTCGGACTG------AATAGAAGACA----CACAGGAGATGCTGGCCAGATATCCTCTGGGTACGGGGCCTTGGAAGGTGCCCAGGCCTCCCCTCTCCATCCGGCT-GGGCCTAGACCCCCCCCCACTTACACA-CTCTGGCAGTGAAATCATCATTACTCCAGGGGCAGTTCCCTCCATTAGTCCAAACTAATATGGAGAAGGTGCTGATCCTCTGATAATTTCTCTTCATTGAGGAAATGG--GGT-GGGCAAGGAGCAAGCCATGGAATTTGGAACCACCCATCCCAG---------CGCCCCAAGAATTG-TGTGACGAgtgacttgaagcaaggcacctcactgggcctcaggttcacttctt i calJac3.chr7 C 0 C 0 s canFam3.chr2 15015919 358 - 85426708 CGGGAGGGA---GTGGGGAGGTCTGCTGCCCC---AGCAAGC-TCCAGCAGAGCTTGGGATG--------GAAACCACAGGCTCACAGCAGGTGCT---CAGA----------------GGCCCAGGAAGCTGCCTGTGC--CCCCTCCCTGTCCAGCTGAGGCCGAGC-CCCTCTCCCGTTC--------------TGAGATCATCGCAGCCTCATTCCCAGCTCATTCCATTCATCTCAGACAATAATTAGAAGGTTCAGCTCCTTTGCTAA--CCTCTCCAGCAAAGAAGTAGCAGTGGGGGCCAGGGACGAGCCCCAGAGCACAGGGAC-CCCATCCCAGGCCGGGGGCCACACTGTGTACTGAGGTGGGTGGCGTctc---------tgtctctctggggctcagtttcattacct i canFam3.chr2 I 90 I 21 e nomLeu3.chr24 560015 94 - 28733288 I a score=5517.000000 s hg38.chr1_KI270760v1_alt 77326 4 + 109528 tgta s panTro4.chr1 30513851 4 + 228333871 tgta i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103067 4 - 229942017 tgta i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33397960 4 + 229590362 CATA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29909190 4 - 227556264 cata i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32672763 4 + 220367699 CATA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189100 4 - 130588469 tgta i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64645581 4 + 155834243 ttta i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016277 21 - 85426708 I a score=529465.000000 s hg38.chr1_KI270760v1_alt 77330 310 + 109528 aagtaaacaaggaccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaagataaaaaaaattagcagggcattgtggcgggcacctggaatcccagctactcgggaggctgaggcaggagaatcgcttgaaaccggaaggcagatgttgcagtgagccgggatcgcaccattgccctccagcctgggtgacagggagagactctgtctcaaaaaaaataaataaggt s panTro4.chr1 30513855 305 + 228333871 aagtaaacaaggaccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctttactaaagataaaaaaaattagcagggcattgtggcgggcgcctggaatcccagctactcgggaggctgaggcaggagaatcgcttgaaaccggaaggcagatgttgcagtgagccgggatcgcaccattgccctccagcctgggtgacagggagag-ctctgtctcaaaaaaaataaa----gt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103071 310 - 229942017 aagtaaacaaggaccaggcgcggtggctcatgcctgtaatcccagcactttgggaggccgagacgggcagatcacgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaattagcagggcattgtggcgggcgcctggaatcccagctactcgggaggctgaggcaggagaatcgcttgaaaccagaaggcagaggttgcagtgagccaggattgcaccattgcactccagcctgggtgacagggagagactctgtctcaaaaaagataaataaata i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33397964 303 + 229590362 AAGTAAACAAGgaccaggcgcggtggttcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagtttaagaccagcctggccaacatggtgaaaattcatctctactaaagatacaaaaaattagccgggcatggtggtgggcgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaag------gttgcagcgagctgggatcgcaccattgcactccagcctgggtgacagggcgagattccgtctcaaaaaa-ataaataaata i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29909194 303 - 227556264 aagtaaacaaggaccaggcgcggtggttcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagtttaagaccagcctggccaacatggtgaaacttcatctctactaaagatacaaaaaattagccgggcatggtggtgggcgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaag------gttgcagtgagctgggatcgcaccattgcactccagcctgggtgacagggcgagactccatctcaaaaaa-ataaataaata i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32672767 303 + 220367699 AAGTAAACAaggaccaggcgcggtggttcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaggagtttaagaccagcctggccaacatggtgaaacttcatctctactaaagatacaaaaaattagccgggcatggtggtgggcgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaaaccggaag------gttgcagtgaactgggatcgcaccattgcactccagcctgggtgacagggcgagactccgtctcaaaaaa-ataaataaata i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189104 300 - 130588469 aaataaacaaggaccaggcacggtggctcacgcctgtaaccccagcactttgggaggccaaggcgggtggatcacgaggtcaggagtttgagaccagcctggccagcatggtgaaacctcgtctctactaaagatacaaaaaattagccgggcatggtggtgggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaaacccgaaa------gttgcagtgagctgggatcgcaccattgcactccagcctgggtgacagggcgagactccgtctcaaaaa----aaataaata i chlSab2.chr20 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016277 21 - 85426708 I e calJac3.chr7 64645585 0 + 155834243 C a score=62699.000000 s hg38.chr1_KI270760v1_alt 77640 25 + 109528 aagtaaacaaggattggtgagaaga s panTro4.chr1 30514160 25 + 228333871 aagtaaacaaagattggtaagaaga i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103381 25 - 229942017 aagtaaacaaggattggtgagaaga i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33398267 25 + 229590362 aagtaaacaaggattggtgagaaga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29909497 25 - 227556264 aagtaaacaaggattggtgagaaga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32673070 25 + 220367699 aagtaaacaaGGATTGGTGAGAAGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189404 25 - 130588469 aagtaaacaaggattggtgagaaga i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64645585 25 + 155834243 aagtcaacaaggattggtgagaaga i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016277 21 - 85426708 I a score=413399.000000 s hg38.chr1_KI270760v1_alt 77665 154 + 109528 tgaagggaggcagcacatataaagggtgcaggatggtgtctggcacatagtaggtgctcaattaatgttagtCCCTTTCCACCAGCCTGAGGGGACTGTGTAGATATTTATGCCCTGTCCGTGGAATGGTGACTGAT----------GTAGGGTTGATTGACCA s panTro4.chr1 30514185 154 + 228333871 tgaagtgaggcagcacatataaagggtggaggatggtgtctggcacatagtaggtgctcaataaatgttagtCCCTTTCCATCAGCCTGAGGGGACTGTGTAGATATTTATGCCCTGTCTGTGGAATGGTGACTGAT----------GTAGGGTTGATTGACCG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103406 152 - 229942017 tgaagggaggcagcac--ataaagggtgcaggatggtgtctggcacatagtaggtgctcaataaatgtcagtccctttaCACCAGCCTGAGGGGACTGTGTGGATATTTATGCCCTGTCCATGGAATGGTGACTGAT----------GTAGGGTTGATTGACCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33398292 154 + 229590362 ctaagggaggcagcacatataaagggtgcaggatggtgtctggcacatagtaggtgctcaataaatgctagtCCCTTTCCACCAGCCTGAGGGGACTGTGTAGATATTTACACCCTGTCCATGGAATGGTGACTGAT----------GTAGGGTTGCTTGACCA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29909522 154 - 227556264 ctaagggaggcagcacatataaagggtgcaggatggtgtctggcacatagtaggtgctcaataaatgctagtccCTTTCCACCAGCCTGAGGGGACTGTGTAGATATTTACACCCTGTCCATGGAATGGTGACTGAT----------GTAGGGTTGCTTGACCA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32673095 154 + 220367699 CTAAGGGAGGCAGCACATATAAAGGGTGCAGgatggtgtctggcacatagtaggtgctcaataaatgctagtccCTTTCCACCAGCCTGAGGGGACTGTGTAGATATTTACACCCTGTCCATGGAATGGTGACTGAT----------GTAGGGTTGCTTGACCA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189429 154 - 130588469 ctaagggaggcagcacatataaagggtgcaggatggtgtctggcacatagtaggtgctcaataaatgctagtCCCTTTCCACCAGCCTGAGAGGACTGTGTAGATATTTATACCCTGTCCATGGAATGGTGACTGAT----------GTACGGTTGCTTGACCA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64645610 154 + 155834243 cagagggaagcagcacatataaagggtgcaggatggtgtctggcatatagtaggtgctcaggaaatgtgagttcCTTTCTACCAGCCTGAGAGGACTGTGTAGACATGTATGCCTTGTCTGCAGAATGGTGACTAAT----------GTAGGGTTGCTTGACCA i calJac3.chr7 C 0 C 0 s canFam3.chr2 15016298 164 - 85426708 taaggggagacagtgcattggaagggcccctgatggcccctggcacacagtaggtgcttcatCTGCACCAGCTCCCTTCCCCCAACTCAAGGGGACTGTGGGGATATCCATGCTCTGTCTAGGGAACAGTGACAAATGGTGAGCAGGGTAGGGTTGTTTGAGCA i canFam3.chr2 I 21 C 0 e nomLeu3.chr24 560015 94 - 28733288 I a score=863464.000000 s hg38.chr1_KI270760v1_alt 77819 378 + 109528 GGGGTGTATAAtgtgtatgtgagctcatgtgagcgtgcatgagtgtgtatgtgtgtgagtgtatataaatgtgtgtgtgtgagagagatagtgtgtgtAGGGGGTGGAAAGGTATAATACAGCTatacccctataacaaaagacaggttaacaagagaaaagcatagcatatttatttaatcaaagttttacataacataggagcctttggaaatgaagaccccaccacccaggggaaatggtctatttttatgcctaggatagttgaagacgggcagttgtgtagaaacatgattgaacaaaaggatgtgatgcaatgggaatagactgagtgggggaaacccagcaagtcctgtctgttcagattcctctcggggc s panTro4.chr1 30514339 378 + 228333871 GGGGTGTATAATGTGTATGTGAGCTCAtgtgagtgtgcatgagtgtgtatgtgtgtgagtgtatataaatgtgtgtgtgAGAGAGAGATAGTGTGTGTAGGGGGTGGAAAGGTATAATACAGCTatacccctataacaaaagacaggttaacaagagaaaagcatagcatatttatttaatcaaagttttacataatataggagcctttggaaatgaagaccccaccacccaggggaaatggtctatttttatgcctaggatagttgaagacgggcagttgtgtacaaacatgattgaacaaaaggatgtgatgcaatgggaatagactgagtgggggaaacccagcaagtcctgtctgttcagattcctctcagggc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103558 378 - 229942017 GGGGTGTATAAtgtgtatgtgagtgcatgtgagtgtgcatgagcgtgtatgtgtgtgagtgtatataaatgtgtgtgtgAGAGAGAGATAGTGTATGTAGGGGGTGGAAAGGTATAATACAGCTatacccctataacaaaagacaggttaacaagagaaaagcatagcatatttatttaatcaaagtcttacataacacaggagcctttggaaatgaagaccccaccacccaggggaaatggtctatttttatgcctaggatagttgaagacgggcagttgtgtagaaacatgattgaacaaaaggacatgatgcaatgggaatagactaagtgggggaaacccagcaagtcccatctgttcagattcctctcggggc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33398446 368 + 229590362 AGGGTGTATAAtgtgtgtgtgagtgcatgtaagcgtgcatgagtgtgtatgtgtgtgagtgtatataaa----tgtgtgtgagag----agtgtgtgtA-GGGGTGGAAAGGTATGATacagccatacccctataacaaaagacacgttaacaagagaaaagcatagcataattatttaatcaaagtcttacataacataggagcctttggaaatgaagaacccaccacccaggggaaatggtctatttttacgcctaggatagttgaagatgggcagttgtgtagaaacatgattgaagaaaaggacatgatgcaatgggaatagactgagtggggg-aacccagcaagtcctgtctgttcagattcctctcggGGC i rheMac3.chr1 C 0 I 69 s macFas5.chr1 29909676 368 - 227556264 AGGGTGTATAAtgtgtgtgtgagtgcatgtaagcgtgcatgagtgtgtatgtgtgtgagtgtatataaa----tgtgtgtgagag----agtgtgtgta-ggggtggaaaggtatgatacagccatacccctataacaaaagacacgttaacaagagaaaagcatagcataattatttaatcaaagtcttacataacataggagcctttggaaatgaagaacccaccacccaggggaaatggtctatttttacgcctaggatagttgaagatgggcagttgtgtagaaacatgattgaagaaaaggacatgatgcaatgggaatagactgagtggggg-aacccagcaagtcctgtctgttcagattcctctcggggc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32673249 370 + 220367699 AGGgtgtataatgtgtgtgtgagtgcatgtaagcgtgcatgagtgtgtatgtgtgtgagtgtatataaa--tgtgtgtgtgagag----agtgtgtgta-ggGGTGGAAAGGTATGATACAGCCAtacccctataacaaaagacacgttaacaagagaaaagcatagcATAATTATTTAATCAAAGTCTTACATAACATAGGAGCCTTTGGAAATGAAGAACCCACCACCCAGGGGAAATGGTCTATTTTTACGCCTAGGATAGTTGAAGATGGGCAGTTGTGTAGAAACATGATTGAAGAAAAGGACATGATGCAATGGGAATAGACTGAGTGGGGG-AACCCAGCAAgtcctgtctgttcagattcctctcggggc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189583 374 - 130588469 GGGGTGTATAAtgtgtgtgtgagtgcatgtgagtgtgcatgagtgtgtatgtgtgtgagtgtatataaatgtgtgtgtgtgagag--acagtgtgtgta-ggggtggaaaggtatgatacagctatacccctataacaaaagacacgttaacaagagaaaagcatagcataattatttaatcaaagtcttatataacataggagcctttggaaatgaagaacccaccacccaggggaaatggtccatttttatgcctaggatagttgaaggtgggcagttgtgtagaaacatgattgaagaaaaggatatgatgcaatgggaatagactgagtggagg-aacccagcaagtcctgtccgttcagattcctcttggggc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64645764 370 + 155834243 GGGGTATGTAACAtgtgtgtgagtgcacgtgagtgtgcat----gtgtatgtgtgtgactgtatgtaaatgtgtgtgtgAGAGAG--AGAAAGTGtgta-ggggtggaaaggtatgatacagttatacccctacaacaaatgacaggttaacaagagaaaagcatagcatatttatttaatcaaagtctgatataacacaggagcctttggaagtgaagaccccaccacccagggaaaatggtctatttttatgcctaagatagttgaagatgggcagctgtgtagaaacatgattgaacaaaagggtgtgaggcaatgggaatagactgagggagga-aacccagcaagtcctgtctgttcagcttcctcttggGGC i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016462 0 - 85426708 C a score=158168.000000 s hg38.chr1_KI270760v1_alt 78197 128 + 109528 cgggtgtggtggctcaggcctataatcccaacactttgggaagccaa-------ggatcacctgaggtcaggagttcgagaccagcctggtcaacatggtgaaacccctgtatctact-aaaaaaaaaaaaaaaaa----------------------------------------------- s panTro4.chr1 30514717 122 + 228333871 cgggtgtggtggctcaggcctataatcccaacacttagggaagccaa-------ggatcacctgaggtcaggagttcgagaccagcctggtcaacatggtgaaacccctgtatctact-------aaaaaaaaaaa----------------------------------------------- i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30103936 128 - 229942017 cgggcatggtggctcaggcctataatcccaacactttgggaggccaa-------ggatcacctgaggtcaggagctcgagaccagcttggccaacatggtgaaacccctgtctctact-aaaaaaaaaaaaaaaaa----------------------------------------------- i ponAbe2.chr1 C 0 I 1 s macFas5.chr1 29910044 135 - 227556264 cgggcgtggtggctcacgcctgtaatcccaacattttgggaggccaaggcgggtggatcacctgaggtcagaagttcgagaccaacctggccaacatggtgaaacccctgtctctact-aaataaataaataaata----------------------------------------------- i macFas5.chr1 C 0 I 39 s papAnu2.chr1 32673619 130 + 220367699 caggcatggtggctcacgcctgtaatcccaacattttgggaggccaaggcgagtggatcacctgaggtcagaagttcgagaccaacctggccaacatggtgaaacccctgtctctact-aaaaaaaaaaaa---------------------------------------------------- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28189957 135 - 130588469 cgggcatggtggctcacacctgtaatcccaacattttgggaggccaaggcgggtggatcacctgaggtcaaaagttcgagaccaacctggccaacatggtgaaacccctgtctctact-aaaaaaaaaaaaacaaa----------------------------------------------- i chlSab2.chr20 C 0 I 31 s calJac3.chr7 64646134 147 + 155834243 ---------------------------CACACATctgaggcggct---------ggatgacctgaggtcaggattttgagaccagcctggccaacatggtgaaatccccatctctacttaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcaaaa i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016462 0 - 85426708 C e rheMac3.chr1 33398814 69 + 229590362 I a score=1118069.000000 s hg38.chr1_KI270760v1_alt 78325 504 + 109528 attagccaggcctataatctcagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtggaggtttcagtgagccgagattgtgccactgcactccagcctgggagacagagcaaaactgcatctcaaaa-----agagagagagagagagagagggattcctctcagcttctctgtgtaggttggctt-cccctataccctgggtatgagcagggcccctctggaaggaaggtcttcaagagagaa----------gac----ctatg-ttttatgtcttgctttgtgggagaggagttctaggttttatgacccaccttggggaagaagaattctggttcctatgactcagactcactctgcaggagaaagaagggcaggagacaggcagataggagaaggtcagaaagaatctgctttcaagaccttctgatctcctttaattcaaagtacctagcatgccaaagcaccatactttggagtgtcatgttctgagccccaGAGTGTACtgtgt s panTro4.chr1 30514839 506 + 228333871 attagccaggcctgtaatctcagctactcaggaggctgaggtaggagaattgcttgaacccaggaggtggaggttgcagtgagccgagattgtgccactgcactccagcctgggagacagagcaaaactgcatctcaaaa---agagagagagagagagagagagggattcctctcagcttctctgtgtaggttggctt-cccctataccctgggtataagcagggcccctctgaaaggaaggtcttcaagagagaa----------gac----ctatg-ttttatgtcttgctttgtgggagaggagttctaggttttatgacccaccttggggaagaagaattctggttcctatgactcagactcactctgcaggagaaagaagggcaggagacaggcagataggagaaggtcagaaagaatctgctttcaagaccttctgatctcctttaattcaaagtacctagcatgccaaagcaccatactttggagtgtcatgttctgagccccaGAGTGTGCTGTGT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30104065 510 - 229942017 tttagccaggcctgtaatctcagctactcaggaggctgagataggagaattgcttgaaccccggaggcggaggttgaagtgagccgagatcgtgccactgcactccagcctgggagacagagcaaaactgcatctcaaaa--aaaagagagagagagagagagagggattcctctcagcctctctgtgtaggttggctt-cccctataccctgggtatgagcagggcccctctggaaggaaggtcttcaagacagaa----------gacct-tctatg-ttttatggcttgctctgtggaagaggagttctagtttttatgacccaccttggggaagaggaattctcttttctatgactcagactcactctgcaggagaaagaggggcaggagacaggcagataggagaaggtcagaaagaatctgctttcgagaccttctgatctcctttaattcaaagtactcagcatcccaaagctccatactttggagtgtcatattctgagccccaGAGTGTGCTGTGT i ponAbe2.chr1 I 1 C 0 s rheMac3.chr1 33398883 513 + 229590362 ATTAGCcgggcctgtaatctcagctactcaggaggctaagataggagaattgcttgaatccgggaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggagacagagcgagactgaatctcaaaaaaaaaaaagagagagagagagagagagattcctctcagcctctctgtataggttggctt-cccctaaaccctgggtatgagcagggcccctctggaaggaaggtcttCAAGGGAGAA----------GACCT-CCTCCATttttatggcttgctttgcaggagaggagttctagtttttacgacccaccttggggaagaggaattctggtttcaatgactcagactcactctacaggagaaagaggggcagaagacaggcagataggagaaggtcagaaagactctgctttcaagaccttctgatctcctttaattcaaagtactcagtatgccaaagcaccatactttggagtgtcatgttctgagccccaGAGTGTGCTGTGT i rheMac3.chr1 I 69 C 0 s macFas5.chr1 29910218 513 - 227556264 attagccgggcctgtaatctcagctactcaggaggctaagataggagaattgcttgaatccgggaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggagacagagcgagactgaatctcaaaaaaaaaaaagagagagagagagagagagattcctctcagcctctctgtataggttggctt-cccctaaaccctgggtatgagcagggcccctctggaaggaaggtcttcaagggagaa----------gacct-cctccatttttatggcttgctttgcaggagaggagttctagtttttacgacccaccttggggaagaggaattctggtttcaatgactcagactcactctacaggagaaagaggggcagaagacaggcagataggagaaggtcagaaagactctgctttcaagaccttctgatctcctttaattcaaagtactcagcatgccaaagcaccatactttggagtgtcatgttctgagccccagagtgtgctgtgt i macFas5.chr1 I 39 C 0 s papAnu2.chr1 32673749 509 + 220367699 -ttagccgggcctgtaatctcagctactcaggaggctaagataggagaattgcttgaatccgggaggcggaggttgcggtgagctgagatcgtgccactgcactccagcctgggagacagagcgagactgaatctc---aaaaaaagagagagagagagagagagagattcctcTCAGCCTCTCTGTATAGGTTGCCTT-CCCCTAAACCCTGGGTATGAGCAGGGCCCCTCTGGAAGGAAGGTCTTCAAGGGAGAA----------GACCT-CCTACATTTTTATGGCTTGCTTTGCAGGAGAGGAGTTCTAGTTTTTACGACCCaccttggggaagaggaattctggtttcAATGACTCAGACTCACTCTGCAGGAGAAAGAGGGGCAGAAGACAGGCAGATAGGAGAAGGTCAGAAAGACTCTGCTTTCAAGACCTTCTGATCTCCTTTAattcaaagtactcagcatgccaaagcACCATACTTTGGAGTGTCATGTTCTGAGCCCCAGAgtgtgctgtgt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28190123 507 - 130588469 attagccaggcctgtaatctcagctactcaggaggctaagataggagaattgcttgaatccgggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggagacagagcgagactgcatctcaaacaaaaaaa------aaagagagagagagattcctctcagcctctctgtataggctggctt-cccctaaaccctgggtatgagcagggcccctctggaaggaaggtcttcaagggagaa----------gacct-cctatgtttttatggcttgctttgcaggagaggagttctagtttttacaacccaccttggggaagaggaattctggtttcaatgactcagactcactctgcaggagaaagaggggcagaagacaggcagataggagaaggtcagaaagactctgctttcaagaccttctgacctcctttaattcaaagtactcagcatgccaaagcaccatactttggagtgtcatgttctgagccccagagtgtgctgtgt i chlSab2.chr20 I 31 C 0 s calJac3.chr7 64646281 497 + 155834243 attagccaggcctgtaatcctagctactcaggaggctgagacagaagaatcacttgaacccgggaggcagaggttgcagtgagccaaggccatgccactgcactccagcctgagagacagag---gactgcgtctcaaaaaaaaaGgagagagagagagagagagagattcctcttggcctctccgtgtaggttggcttccccccataacctgggtatga-------------ggcaggatgctcttcaaaggagaacagagagagtgacccatctaca-ttttatggctagctttgcaggagaggagttctagttttaatgaccctcctcggggaagaggagttctggtgtctatgactcagattcactctgcag----aagaggggcaggagctaggaaggtagg---aggtcagaaaga--ctgcttttgagacc-tctgatctcctttaattcaaagtcctcggtgtgccaaagcaccatacttttcagtgtcatgttctgagccccagcaCGTGCTGTG- i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I e canFam3.chr2 15016462 0 - 85426708 C a score=125789.000000 s hg38.chr1_KI270760v1_alt 78829 52 + 109528 gtggggtgggtgtgtgcatgactgtttatgttgtgtatgCATAAGCTGTATT s panTro4.chr1 30515345 52 + 228333871 GTGGGGTGGGTGTGTGCATGACTGTTTATGTTGTGTATGCATATGCTGTGTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30104575 52 - 229942017 GTGGGGTGGGTGTGGGCATGACTGTTTATGTTGTGTATGCACATGTTGTGTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33399396 52 + 229590362 GGGGGGTGGGTGTGTGCATGACTGTTTATGTTGTTTATGCATATGTTGTGTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29910731 52 - 227556264 ggggggtgggtgtgtgcatgactgtttatgttgtttatgcatatgttgtgtt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32674258 52 + 220367699 ggggggtgggtgtgtgcatgactgtttatgttgtttatgcatatgttgtgtt i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28190630 52 - 130588469 gtggggtgggtgtgtgcatgactgtttatgttgtTTATGCACATGTCGTGTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64646778 50 + 155834243 --GAGGAGGGGATGTGCATGAGTGTTTATGCTGTGTATGCATATGTTGTGTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15016462 51 - 85426708 GTGGGGAGGGAGTGTGC-TGCCCATATACATGCTGTGCACCTCTGTTGGGTT i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 560015 94 - 28733288 I a score=179023.000000 s hg38.chr1_KI270760v1_alt 78881 65 + 109528 TGAGATCTGAGGATGAGGCTTGGAGCAAAGAGATGAAGTGG-TGGATGGTGATATGGGGAAGTTAG s panTro4.chr1 30515397 65 + 228333871 TGAGATCTGAGGATGAGGCTTGGAGCAAAGAGATGAAGTGG-TGGATGGTGATATGGGGAAGTTAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30104627 65 - 229942017 TGAGATCTGAGGATGAGGCTTGGAGCAAAGAGATGAAGTGG-TGGATGGTGATATGGGGAAGTTAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 560109 64 - 28733288 TGACATGTGAGGGTG-GGCAGGGAGGAAAATGAGGAAGTGG-TGGATGATGATCGGGAAAAGTTAG i nomLeu3.chr24 I 94 I 600 s rheMac3.chr1 33399448 63 + 229590362 TGAGATCTGAGGATAAGGCTTGGAGCAAAGAGATTAAGTGG-TGGGTGGTTATATGGGGAAGTT-- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29910783 63 - 227556264 tgAGATCTGAGGATAAGGCTTGGAGCAAAGAGATTAAGTGG-TGGGTGGTTATATGGGGAAGTT-- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32674310 63 + 220367699 TGAGATCTGAGGATAAGGCTTGGAGCAAAGAGATTAAGTGG-TGGGTGGTTATATGGGGAAGTT-- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28190682 63 - 130588469 TGAGATCTGAGGATAGGACTTGGAGCAAAGAGATTAAGTGG-TGGGTGGTTATATGGGTAAGTT-- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64646828 65 + 155834243 TGAGATCTGAGGATGAGACTTGGAGCAGAGGGATGAAGTGG-CAGGAGGTGATACGGGGAAGTTAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15016513 66 - 85426708 TGGGATCTGAGGGCCAGGCTGAGAGGAAAGGGCTGCTGGGGACAGGTGGTGACATAGGGAAGTGAG i canFam3.chr2 C 0 C 0 a score=1971573.000000 s hg38.chr1_KI270760v1_alt 78946 783 + 109528 TCAGAGGTCTGCTCAGAGAAGACTGGGTGCTGTGCAATCCCTGGGGAAAT---------CTTTTTCATGACTGTTTTAGTAAGTAATAAAGGGCA-TTTTTTCCTGAACTTATAGTAAAGTTAACATCCAAGAAGGTGTCCCCATCTGACACTTTAATTCCTTGTCTCCTTGGGGAATACACAGCAGCGagccatggagc-aggcacggag--catcttcccagagtgtcatcttt-ctccaagatc-agagaaatgcccattacttaatatttaaaacaccatggataaatcatagagaggaaaatgtgcatagatttgaagt---actaaattagaaagctccaagaagaagtgtgccagtggctggttgcttcagctcctgcctctaggcaccctggggATATAGAAGCCCTACCTTGATATAAGGGGTGCATAGTGGATGCCTTTTGGAATCCTTGAATTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACCACTTGCTCTTATTGGGGTTTTAGAAAACTGTCTCTGCAGAGCAGCTAGAGGTGGGGGAGCATAGAGGCCTGTGAGGAACGTTTGAAATAATACAGGTGAGGGGTGAGCGGAGGCTTGGAGCAGGACAGGGCAAAGGGAAAAGAGAAGAGGAAACTGGAAAGATATGTGGGAAAATTGCTCTTCGACTCTGGACTTGGGAGTGGAAAAATGTAGGACATGGGGAGGGAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTTCTCACTTGAGTG------------GTCTCAGAATCACAGGAAGAG s panTro4.chr1 30515462 783 + 228333871 TCAGAGGTCTGCTCAGAGAAGACTGGGTGCTGTGCAATCCCTGGAGAAAT---------CTTTTTCATGACTGTTTTAGTAAGTAATAAAGGGCA-TTTTTTCCTGAACTTATAGTAAAGTTAACATCCAAGAAGGTGTCCCCATCTGATACTTTAATTCCTTGTCCCCTTGGGGAATACACAGCAGCGagccatggagc-aggcatggag--catcttcccagagtgtcatcttt-ctccaagatc-agagaaatgcccattacttaatatttaaaacaccatggataaatcatagagaggaaaatgtgcatagatttgaagt---actaaattagaaagctccaagaagaagtgtgccagtggctggttgcttcagctcctgcctctaggcaccctggggATATAGAAGCCCTACCTTGATATAAGGGGTGCATAGTGGATGCCTTTTGGAATCCTTGAATTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACCACTTGCTCTTATTGGGGTTTTAGAAAACTGTCTCTGCAGAGCAGCTAGAGGTGGGGGAGCGTAGAGGCCTGCGAGGAACGTTTGAAATAATACAGGTGAGGGGTGAGCGGAGCCTTGGAGCAGGACAGGGCAAAGGGAAAAGAGAAGAGGAAACTGGAAAGATATGTGGGAAAATTGCTCTTCGACTCTGGACTTGGGAGTGGAAAAATGTAGGACATGGGGAGGGAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTTCTCACTTGAGTG------------GTCTCAGAATCACAGGAAGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30104692 779 - 229942017 TCAGAGGTCTGCTCAGAGAAGACTGGGTGCTGTGCAACCCCTGG-GAAAT---------CTTATTCATGACTGTTTTAATAAGTAATAAAGGGCA-TTTTTTCCTGAACTTATAGTAAAGTTAACATCCAAGAAGGTGTCCCCATCTGACACTTTAATTCCTTGTCCCCTTGGGGACTACACAGCAGTGAGTCATGGAGC-AGGCACGGAG--AATCTTCCCAGAGTGTCATCTTT-CTCCAAGATC-AGAGAAATGCCCATTACTTAATATTTAAAACACCATGGATAAATCATAGAGAGCAAAATATGCATAGACTTGAAGT---ACTAAATTGGAAAGCTCC---AAGAAGTCTGCCAGTGGCTGGTTGCTTCAGCTCCTGCCTCTAGGCACCCTGGGGATATAGAAGCCCTACCTTGATACAAGGGGCGCATAGTGGATGCCTTTTGGAATCCTTGAATTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACTACTTGCTCTTATTGGGGTTTTAGAAAACCATCTCTGCAGAGCAGCTAGAGGTGGTGGAGCCTAGAGGCCTGCGAGGAACTTTTGCAATAATAGAGGTGAGGGGTGAGTAGAGCCTTGGAGCAGGACAGGGCAAAGGGAAAAGAGAAGAGGAAACTGGAAAAATATGTGGGAAAACTGCTCTTCGACTCTGGACTTGGGAGTGGAAAAATGTGGGACATGGGGAGGGAAGAATCCACTCTGACTGGGGATTTAACCCTGGGTGCTCACTTGAGTG------------GTCTCAGAGTCACAGGAAGAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33399511 774 + 229590362 --AGAGGTCTGCTCAGAGAAGACCGGGTGCTGTGCAGTCCCTGGGGAAAT---------CTTATTCATGATTGTTTTAATAAGCAGTAAAGGGCA-TTATTTCATGAACTTGTAGTAAAGTTAACTTCCAAGAAGTTGTCCCCATCTAACACTTTAATTCCTTGTccccttggggaatacatagcagtgagccatggagc-aggcatggag--catcttcccagggtgtcatcttt-ctccaagatc-agagaaatgcccattacttaatatttaaaacaccatggataaatcatagacagcaaaatgtgcatagttttgaagt---actaaattggaaagctccaagaagaagtgtgccagtggctggttgcttcagctcctgcctctaggcaccctggggATATAGAAGCCCTACCTTGATATAAGGGGCTCATAGTGGATGCCTTTTGGAATCCTTGAAGTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACTGCTTGATCTTGTTGGGGTTTTAGAAAACAGTCTCTGTAGAGCAACTAGAAGTGGGAGAGCATAGAGGCCTGCGAGGAATGTGTGAAACAATACAGGTGAGC-------GGAGCCTTAGAGCAGGACAGGGAAAAGGGAAAAGAGAAGAGGGAACTGGAAATATATGCGGGAAAACTGCTCTTGGACTCTGGACTTGGGAGTGGAAAAATGTGGGACATGGGGAGGAAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTGCTCACTTGAGTG------------GTCTCAAAATCACAGGAAGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29910846 774 - 227556264 --AGAGGTCTGCTCAGAGAAGACCGGGTGCTGTGCAGTCCCTGGGGAAAT---------CTTATTCATGATTGTTTTAATAAGCAGTAAAGGGCA-TTATTTCATGAACTTGTAGTAAAGTTAACTTCCAAGAAGTTGTCCCCATCTAACACTTTAATTCCTTGTccccttggggaatacatagcagtgagccatggagc-aggcatggag--catcttcccagggtgtcatcttt-ctccaagatc-agagaaatgcccattacttaatatttaaaacaccatggataaatcatagagagcaaaatgtgcatagttttgaagt---actaaattggaaagctccaagaagaagtgtgccagtggctggttgcttcagctcctgcctctaggcaccctggggATATAGAAGCCCTACCTTGATATAAGGGGCTCATAGTGGATGCCTTTTGGAATCCTTGAAGTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACTGCTTGATCTTGTTGGGGTTTTAGAAAACAGTCTCTGTAGAGCAACTAGAAGTGGGAGAGCATAGAGGCCTGCGAGGAATGTGTGAAACAATACAGGTGAGC-------GGAGCCTTAGAGCAGGACAGGGAAAAGGGAAAAGAGAAGAGGGAACTGGAAATACATGCGGGAAAACTGCTCTTGGACTCTGGACTTGGGAGTGGAAAAATGTGGGACATGGGGAGGAAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTGCTCACTTGAGTG------------GTCTCAAAATCACAGGAAGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32674373 774 + 220367699 --AGAGGTCTGCTCAGAGAAGACCGGGTGCTGTGCAGTCCCTGGGGAAAT---------CTTATTCATGATTGTTTTAATAAGCAGTAAAGGGCA-TTATTTCATGAACTTGTAGTAAAGTTAACTTCCAAGAAGTTGTCCCCATCTAACACTTTAATTCCTTGTCCCCTTGGGGAATACATAGCAGTGAGCCATGGAGC-AGGCATGGAG--CATCTTCTCAGGGTGTCATCTTT-CTCCAAGATC-AGAGAAATGTCCATTACTTAGTATTTAAAACACCATGGATAAATCATAGAGAGCAAAATGTGCATAGTTTTGAAGT---ACTAAATTGGAAAGCTCCAAGAAGAAGTGTACCAGTGGCTGGTTGCTTCAGCTCCGGCCTCTAGGCACCCTGGGGATATAGAAGCCCTACCTTGATATAAGGGGCTCATAGTGGATGCCTTTTGGAATCCTCGAAGTTCAGGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACTGCTTGACCTTGTTGGGGTTTTAGAAAACAGTCTCTGTAGAGCAACTAGAAGTGGGAGAGCATAGAGGCCTGCGAGGAATGTGTGAAATAATACAGGTGAGC-------GGAGCCTTAGAGCAGgacagggaaaagggaaaagagaagagggaacTGGAAATATATGCGGGAAAACTGCTCTTGGACTCTGGACTTGGGAGTGGAAAAATATGGGACATGGGGAGGAAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTGCTCACTTGAGTG------------GTCTCAAAATCACAGGAAGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28190745 781 - 130588469 --AGAGGTCTGCTCAGAGAAGACCGGGTGCTGTGCAGTCCCTGGGGAAAT---------CTTATTCATGATTGTTTTAATAAGCAGTAAACGGCA-TTATTTCCTGAACTTGTAGTAAAGTTAACTTCCAAGAAGTTGTCCCCATCTAACACTTTAATTCCTCATCCCCTTGGGGAGTACATagcagggagccatggagc-aggcatggag--catcttcccagggtgtcatattt-ctccaagatc-agagaaatgcccattacttaatatttaaaacaccatggataaaacagagagagcaaaatgtgcatagttttgaagt---actaaattggaaagctccaagaaggagtgtgccaatggctggttgcttcagctcctgcctctaggcaccctggggATATAGAAGCCCTACCTTGATATAAGGGGCTCATAGTGGATGCCTTTTGGAATCCTTGAAGTTCAAGAAAT-GAGTGTCAGAGAAGGACA----CAGAGCAGGGCCACTGCTTGATCTTGCTGGGGATTTAGAAAACGGTCTCTGTAGAGCAACTAGAAGTGGGAGAGCATAGAGGCCTGCGAGGAACGTGTGAAATAATGCAGGTGAGCGGTGAGTGGAGTCTTAGAGCaggacaaggaaaagggaaaagagaagagggaactggaaaTATATGCGGGGAAACTGTTCTTGGACTCTGGACTTGGGAGTGGAAAAATATGGGACATGGAGAAGAAAGAATCCAGTCTGACTGGGGATTTAACCCTGGGTGCTCACTTGAGTG------------GTCTCAGAATCACAGGAAGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64646893 774 + 155834243 TCCGAGGTCTGCTCAGAGAAGACTGGATGCTGTGCAATCCCTGGGGAAAT---------CTTAGCCGTGATTGTTTTAATATGAAATAAAGGGCA-TTTTTTCCTGAACATGTAGCAAAGTTAACATCCAAGAAGATGTCTCCATCTGACACTTTAATTCCTTATCcccctggggaatacatagcagtgagccatggagc-agacacggag--catcttcccag-gtgtcgtcttt-ctccaagatg-acagaaatgcccattacttaatatttaaaacaccatggataaattatgcagggagaaatgtgcatagatttgaagt---actaaattg--aaaccccaaaaagaagtgtgccagtggctggctgcctcagctcctg-ctctaggcaccctggggATACAGGAGCCCCACCTTGATATAAGAGGTGCACAGTGGATTCCTTTCGGAATCCTTGGATTTCAGGAAAT-GAGTGTGGGAGAAGGGCA----CGGAGCAGGGCCACAATCTGCTCTCATTGGGGTTTTAGAAAACTGTCTCT-----GCAACTAGAAGTGGGGGAACCTGGAGGTCTGCAAGGAACCTTTGTGATAATACAGGTGAGGGGTGAGCAGAGCCTTGAAGCAGGAATGAGCAAAGGGAAAAGAGGAGAGGGGACTGGACAGATACATGGGAAAACTGCTCTTGGACTCTGGACTTGGGAGTGGAAAAATGTGGGACATGAGGAGAGAGGAATTCAGTCTGACTGGGGATTTAACCCTCGATGCTCATTTGAGTG------------GTCTCAGAATCTCAGGAGGAT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15016579 783 - 85426708 TCAAGGGCGAGCTCAGAGGAGCCTGGGGCTTGTGTGA-CCCTGAGGACCCTCAGCATGACACATTCATGACTGTTTTAATATGAAATAAAGGGGATTTTTTTCCTGACCTTAGGGTAAAGGGGACACCCTAGAAGACATCTGGGTCCCGAGCTCTGATCGCTGGCCTCACCGGGAAAGGCAGAGCAGTGAGCCACGGAGCAAGGCGGGGGGGCCCtcttcccagagtatcgcctctactccaagacctggggaaaggccccttattttatatcaaacacaccttggatgtgtc----aggacaaaatgtgtggaattttgaaatagaactaaatggggaagatcaaagaacaaaaatgccagtggctgggtgcttcagcctccgccagcagacaccgtggggACACAGAAGCCCTCCCTCCACAGGAGGGGTGCCCCAGGGGAATCACTGGGAATCCCGGCTTTTCAGGTAATGGAGTGT-GCAGGGGGGCAGGGGAAGAGCAGGGCCCTGATTGGCTCTCATGGGGCTTTTTGAAAACTGTCCCTGCACAGGGACTAGAGGTGGGGACAC-CAGAGCCCTGAGGGGAAGCTGT--AATGACACAGGTGAGGGAGGAGCAGGGCCTGGGAGCAGGGGGAGGCAGAGGGGCCAGAGAAGAGGGGA-GGGAAAGGTATCCTGCAGAACGG------GCCCCT--ACCTGAGGGC----------------TGGGGAGGGAGGAGCCCAGGCTGCCCAGGAGTTCAGCCCTGAGGG-TCAGCTGTGGGCAGGGGCAGCCAGGTTCAGAATCACAAGAAGAg i canFam3.chr2 C 0 I 224 e nomLeu3.chr24 560173 600 - 28733288 I a score=478370.000000 s hg38.chr1_KI270760v1_alt 79729 179 + 109528 AGGCAAGTGTCCATTCTGCAG-GTAGGGGTAACAAAAGGGT----------GGAAGGCCCCAATTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACATTGTTCaaatagaaagggaaacactatccaattcattctgtggggccagtatttttctaatacaaaaactag-aaaaagagctaa s panTro4.chr1 30516245 179 + 228333871 AGGCAAGTGTCCATTCTGCAG-GTGGGGGTAACAAAAGGGT----------GGAAGGCCCCAATTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACATTGTTCaaatagaaagggaaacactatccaattcattctgtggggccagtatttttctaatacaaaaactag-aaaaagagctaa i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30105471 179 - 229942017 AGGCAAGTGTCCATTCTGCAG-GTGGGGGTAACAAAAGGGT----------GGAAGGCCCCAGTTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAATTACATTGTTCaaatagaagggggaacactatccaattcattctgtggggccagtatttttctaatacaaaaactag-aaaaagagctaa i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33400285 180 + 229590362 AAGCAAGTGTCCGTTCTGCAG-GTGGGGGTAACAAAGGGGT----------GGAAGGCCCCAGTTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACATTTTTCaaatagaagggggaacacgatccaattcattctgtggggctggtatttttctgatacaaaaactagaaaaaagagctaa i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29911620 180 - 227556264 AAGCAAGTGTCCGTTCTGCAG-GTGGGGGTAACAAAGGGGT----------GGAAGGCCCCAGTTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACATTGTTCaaatagaagggggaacacgatccaattcattctgtggggctggtatttttctgatgcaaaaactagaaaaaagagctaa i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32675147 180 + 220367699 AAGCAAGTGTCCGTTCTGCAG-GTGGGGGTAACAAAAGGGT----------GGAAGGCCCCAGTTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACGTTGTTCAAATAGAAGGGGGAACACGATCCAATTCATTCTGTGGGGCTGGTATTTTTCtgatacaaaaactagaaaaaagagctaa i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28191526 180 - 130588469 AAGCAAGTGTCCGTTCTGCAG-GTGGGGGTAACAAAAGCGT----------GGAAGGCCCCAGTTGTTGTAAGCCACCAATCCTTTATTCAACTAGGACAACTACATTGTTCaaatagaagggggaacactatccaattcattctgtggggctggtatttttctgatacaaaaactagaaaaaagagctaa i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64647667 178 + 155834243 GGGCAAGTGTCCATTCTGCAG-GTGGGGGTAACAAAAGGGT----------GGAAGGCCCCAACTGTTGTAAGCCACCAATCCTTTATTTAGCTAGGACAACTACAATGTTGaaatagaaaggggaacactattcaattcattctgtggggcc-gtatttttctgatacaaaaactag-aaaaagagctaa i calJac3.chr7 C 0 C 0 s canFam3.chr2 15017586 189 - 85426708 AGACAAGTGCTTATTCTGCAGAGAGGGGACAATGGGGGGGTGCTGGGGGGGGACAGGCCCAAGTTGCTGTGAGCCACCAATCCTTTCTTCAGCTAGGACGGATGGTACTGagaaatagaagggcggacactccccaggccgttctaggaggccagtatccacctgaaccagaagc-ag-gcagaCAGTTAA i canFam3.chr2 I 224 I 104 e nomLeu3.chr24 560173 600 - 28733288 I a score=3158105.000000 s hg38.chr1_KI270760v1_alt 79908 1377 + 109528 tatgtaaataaaactgtagaataatattctttacaaatataaatgcaaaaatcctcaccaaaacactaataagctgaatgtgaataagattacacaccataagcaagtaggatttatcc--agaatgcaaattcggcttaatatatgaaaagcagggtgatgtcaccaaaatggcagagtagaagcaatctggcttcattctcctccacagaaaacc-------aa---------------------------atatatatatatatccagtgcaaagattgcaaccagcaatgtcccaaaactcaaatatgagactgagacaatccctgggaccacagaaagattaaaaattctgagcagatggtaaaagaaatggacttctgtatccacaacacctctccctcaatctgccaggcatcgtgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagatcaagataaacagccagctttcctgccatcttggcttccctttcagaaaagccattcttgccacaacccatgggaagc-atcacaagtgcctgtagggagaaaaaccactgggggcagccagaaacaaaggcaggaggcaaaaccagcaaccccacctgaaaaactctgctctttatctcagccaaaggaaaagtcaaatcatagtggctgttcagcagcaccacattgtaggagacaggcttcatgggtcttctgggcatgaaccagctttcccatctagctggggcatccccttttggatcatccttcccaaacaactggatatcccctctgggacacccttcccccaatttaggataggttgcgctctgaatatttgcaagagctgaggcaattctgagtgtaaggcaccatctagtgccaaaaaggaggaagagataaaagattaagggacgttgggaggcaattgcagagaacatctaagcaaacatactctataccccacaaagacaaaaacaaaccaaacagcaaagactggaataaataactaatccttcaatgcagtcataggtgtagtccacaagaaacaacacagcaaacaggtcatagttatgacctccccaagtggacaaagcaaggagccagtaaccaaccctaacaagatagtaatgtgtgaggtctcagatggagaattcaaaatacagttctaaggaaactcagtgaacttcaagataacacagaaaagtagttgaggaattttatcagagaaatttaacaaagagattgaaataatatatatatataaaaacagaaatcctagaactgagaaatacacttgctgacctgaaaaattcattaaaggctctcaacagcagaattgatcaagcagaagaaagaatcagtgagctcaaagacaggttatttgaaaatacagtgtaag s panTro4.chr1 30516424 1379 + 228333871 tatgtaaataaaaccatagaataatattctttacaaatataaatgcaaaaatcctcaccaaaacactaataagctgaatgtgaataagattacacaccataagcaagtaggatttatcc--agaatgcaaatttggcttaatatgtgaaaagcaGGGTGATGTCAccaaaatggcagagtagaagcaatctggcttcattctcctccacagaaaacc-------aa---------------------atatatatatatatatatatccagcgccaagattgcaaccagcaatatccccaaactcaaatatgagactgagacaatccctggggccacagaaagattaaaaattctgagcagatggtaaaagaaagggacttctgtatccacaacacctctccctcaatctgccaggcaccgtgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagatcaagacaaacagccagctttcctgccatcttggcttccctttcaggaaagccattcttgccacaacccatgggaagc-atcacaagtgcctgtagggagaaaaaccactgggggcagccagaaacaaaggcaggaggcaaaaccagcaaccccacctgaaaaactctgctctttatctcagccaaaggaaaagtc----tatagtggctgttcagcagcaccacattgtaggagacaggcttcatgggtcttctgggcatgaaccagctttcccatctagctcgggcatccccttttggatcatccttcccaaacaactgggtatcccctctgggacacccttccccccatttaggataggttgcgctctgaatatttgcaagagctgaggcaattctgagtgtaaggcaccatctagtgccaaaaaggaggaagagatcaaagattaagggacctcgggaggcaattgcagagaacatctaagcaaacatactccataccctacaaagacaaaaacaagccaaacagcaaagactggaataaataactaatccttcaatgcagtcacaggcgtagtccacaagaaacaacacagcaaacaggccatagttatgacctccccaagtggacaaagcaaggagccagtaaccaaccctaacaagatagtaatgtgtgaggtctcagatggagaattcaaaatacagttctaaggaaactcagtgaacttcaagataacacagaaaagtagttcaggaattttatcagagaaatttaacaaaaagattgaaataatatatatatatataaacagaaatcctagaactgagaaaaacacttgctgacctgaaaaattcattaaaggctctcaacagcagaattgatcaagcagaagaaagaatcagtgagctcaaagacaggctatttgaaaatacagtgtaag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30105650 1396 - 229942017 tatgtaaataaaactgtagaataatattctttacaaatataaatgcaaaaatcctcaacaaaacactaataagctgagtatgaataagattatacaccataagaaagtaggatttatcc--agaatgcaaatttggcttaatatatgaaaagcaGGGTGATGTCAccaaaatggcagagtagaagcaaactggcttcattctcctccacagaaaacc-------aaaatatgtatatatatatatatatatatatatatatatatctccagtgtcaagattgcaaccagcaatatcccaaaactcaaatatgagactgagacaatccctggggccacagaaagaataaaaattctgaacagatggtaaaagaaatggacttctgtatccacaacacctctccctcaatctgccaggcaccatgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagatcaagatgaacagccagctttcctgccatctttggttccctttcaggaaagtcattcttgccacaacccat-ggaagc-accacaagtgactgcagggagaaaaaccactgggggcagccagaaacaaaggcaggaggcaaaaccagcaaccccacccgaaaaa--ctgctctttatctcagccaaaggaaaagtcaaatcacagtggctgttcagcagcaccacattgtaggagacaggcttcatgggtcttctgggcatgaaccagctttcctacctagctggggcatccccttttggatcatccttcccaaacaactggatatcccctctgggacaccctttcccccatttagggtaggtagcgctctgaatatttgcaagagctgaggcaattctgggtgtaaagcaccatctagtgccaaaaaggaggaagagatcaaagattaagggacctcaggaggcaattgcagagaacatctaagcaaatataccctataccctagaaagacaaaaacaagccaaactgcacagactggaataaataactaatccttcaatgcagtcatgggcgtagtccacaagaaaca--acagcaaacagga---aactacgacctccccaaatggacaaagcaaggagccagtaaccaaccttaacaagatagtaatatgtgaggtctcagattgagaattcaaaatacagttctaaggaaactcagtgaacttcaagataacacagaaaagtagttcaggaattttatcagagaaatttaacaaagagattgaaataatatatatataaaaaaagagaaatcctagaactgagaaatacatttgctgacctgaaaaattcattaaaggctctcaacagcagaattgatcaagcagaagaaagagtcagtgagctcaaagacaggttatttgaaaatacagtgtaag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33400465 1384 + 229590362 tatgtaaataaaactgtagaataatattctttacaaatatagatgcaaaaatcctcaacaaaacactaataagctgaatgtgaataagattatataccataagcaagtaggatttatcc--agaatgcaaatttggcttaatatatgaaaagcaGGGTGATGTCAccaaaatggcagagtagaagcaatctggcttcattcgcctccacagaaaaccaaaaaaaaa--------------aaaaaaaaaaaaaaaaaaaaaaaaattccagtgccaaaactgcaaccagcaatatcccaaaactcaaatatgagactgagacaatccctggggccacagaaagattaaaaattctgagcagatggtagaagaaatggacttctgtatccacaacacctctccctcaatctgccaggcaccgtgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagaacaagatgaacagccagcttttgggccatcttgggttccctttcaggaaagccattctccacacaactcatgggaagc-atcacaagtgcctgcagggagaaaaaccactggggacagccagaaacaaaggcaggaggcaaaaccagcaaccccacctgaaaaa--ctgctctttatctcagccaaaggaaaagtcaaatcacagtggctgttcagcagcaccacattctaggagacaggcttcatgggtcttctgggcatgaaccagctttcccacctagctgtggcatcccctttgggatcatccttcccaaacaactgggtatcccctctgggacacccttcccctcatttgggatgggtagcgctctgaatatttgcaagagctgaggcaattctgggtgtaaggcaccatctagtgccaaaaaggaggaagagatagaagattaagggacctcaggaggcaatcgcagagaacatctaagcaaacataccctataccctagaaagac-aaaacaagccagacagcaaagagtggaataaaaaactaacccttcaatgcagtcataggcatagtccacaagaaaca--acagcaaacagga---aactatggcctccccaaatggacaaagcaaggatccagtaactaaccctaacaagatagtaatgtgtgaggtctcagattgagaattcaaaatacagttccaaggaaactcagtgaacttcaagataacacagaaaagtagttcaggaa-tttatcagataaatttaacaaagagattgaaata--atagatataaaaaaacagaaatcctagaactgagaaacacatttgctgacctgaaaaattcattaaaggctcc--acagcagagttgatcaggcagaagaaagaatcagtgagctcaaagacagattatttgaaaatacagtgtaag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29911800 1377 - 227556264 tatgtaaataaaactgtagaataatattctttacaaatatagatgcaaaaatcctcaacaaaacactaataagctgaatgtgaataagattatataccataagcaagtaggatttatcc--agaatgcaaatttggcttaatatatgaaaagcagggtgatgtcaccaaaatggcagagtagaagcaatctggcttcattcgcctccacagaaaacc-------aa--------------aaaaaaaaaaaaaaaaaaaaaaaaattccagtgccaaaactgcaaccagcaatatcccaaaactcaaatatgagactgagacaatccctggggccacagaaagattaaaaattctgagcagatggtagaagaaatggacttctgtatccacaacacctctccctcaatctgccaggcaccgtgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagaacaagatgaacagccagcttttgggccatcttgggttccctttcaggaaagccattctccacacaactcatgggaagc-atcacaagtgcctgcagggagaaaaaccactggggacagccagaaacaaaggcaggaggcaaaaccagcaaccccacctgaaaaa--ctgctctttatctcagccaaaggaaaagtcaaatcacagtggctgttcagcagcaccacattctaggagacaggcttcatgggtcttctgggcatgaaccagctttcccacctagctgtggcatcccctttgggatcatccttcccaaacaactgggtatcccctctgggacacccttcccctcatttgggatgggtagcgctctgaatatttgcaagagctgaggcaattctgggtgtaaggcaccatctagtgccaaaaaggaggaagagatagaagattaagggacctcaggaggcaatcgcagagaacatctaagcaaacataccctataccctagaaagac-aaaacaagccagacagcaaagagtggaataaaaaactaacccttcaatgcagtcataggcatagtccacaagaaaca--acagcaaacagga---aactatggcctccccaaatggacaaagcaaggatccagtaactaaccctaacaagatagtaatgtgtgaggtctcagattgagaattcaaaatacagttctaaggaaactcagtgaacttcaagataacacagaaaagtagttcaggaa-tttatcagataaatttaacaaagagattgaaata--atagatataaaaaaacagaaatcctagaactgagaaacacatttgctgacctgaaaaattcattaaaggctcc--acagcagagttgatcaggcagaagaaagaatcagtgagctcaaagacagattatttgaagatacagtgtaag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32675327 1368 + 220367699 tatgtaaataaaactgtagaataatattctttataaatatagacgcaaaaatcctcagcaaaacaCTAATAAGCTGAATGTGAATAAGATTATATACCATAAGCAAGTAGGATTTATCC--AGAATGCAAATTTGGCTTAATATATGAAAAGCAGGGTGATGTCACCAAAATGGCAGAGTAGAAGCAATCTGGCTTCATTCGCCtccacagaaaacc-------------------------------aaaaaaaaaaaaaaaaattccagtgcCAAAACTGCAACCAGCAATATCCCAAAACTCAAATATGAGACTGAGACAATCCCTGGGGccacagaaagattaaaaattctGAGCAGATGGTAGAAGAAATGGACTTCTGTATCCACAACACCTCTCCCTCAATTTGCCAGGCACCGCGTATGGAAAATTCCTCCTGTACTCACAGTTTTTACACTGGAAAAAGTGAGAACAAGATGAACAGCCAGCTTTTGGGCCATCTTGGGTTCCCTTTCAGGAAAGCCATTCTCCACACAACTCATGGGAAGC-ATCACAAGTGCCTGCAGGGAGAAAACCCACTGGGGACAGCCAGAAACAAAGGCAGGAGGCAAAACCAGCAACCCCACCTGAAAAACTCTGCTCTTTATCTCAGCCAAAGGAAAAGTCAAATCATGGTGGCTGTTCAGCAGCA-CACATTCTAGGAGACAGGCTTCATGGGTCTTCTGGGCATGAACCAGCTTTCCCACCTAGCTGTGGCATCCCCTTTGGGATCATCCTTCCCAAACAACTGGGTATCCCCTCTGGGACACCCTTCCCCTCATTTGGGATGGGTAGCGCTCTGAATATTTGCAAGAGCTGAGGCAATTCTGGGTGTAAGGCACCATCTAGTGccaaaaaggaggaagagatagAAGATTAAGGGACCTCAGGAGGCAATCACAGAGAACATCTAAGCAAACATACCCTATACCCTAGAAAGAC-AAAACAAGCCAGACAGCAAAGAGTGGAATAAAAAACTAACCCTTCAGTGCAGTCATAGGCATAGTccacaagaaaca--acagcaaacaggA---AACTATGGCCTCCCCAAATGGACAAAGCAAGGAGCCAGTAACTAACCCTAACAAGATAGTAATGTGTGAGGTCTCAGATTGAGAATTCAAAATACAGTTCtaaggaaactcagtgaacttcaagataacacagaaaagtaGTTCAGGaa-tttatcagataaatttaacaaagagattgaaata--atagatataaaaaaacagaaatcctaGAACTGAGAAACATGTTTGCTGACCTGAAAAATTCATTAAAGGCTCC--ACAGCAGAGttgatcaggcagaagaaagaatcagtgagctcaaagacagattatttgaaaatatagtgtaaa i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28191706 1368 - 130588469 tatgtaaataaaactgtagaataatattctttacaaatatagatgcaaaaatcctcaacaaaacactaataagctgaatgtgaataagattatataccataagcaagtaggatttatcc--agaatgcaaatttggtttaatatatgaaaagcagggtgatgtcaccaaaatggcagagtagaagcaatctggcttcattcgcctccacagaaaacc---------------------------------aaaaaaaaaaaaaaattccagtgccaaaactgcaaccagcaatatcccaaaactcaaatatgagactgagacaatccctggggccacagaaagattaaaaattctgagcagatggtagaagaaatggacttctgtatccacaacacctctccctcaatctgccaggcaccgcgtatggaaaattcctcctgtactcacagtttttacactggaaaaagtgagatcaagatgaacagccagcttttgggccatcttgagttccctttcaggaaagccattcttgacacaactcatgggaagc-atcacaagtgcctgcagggagaaaaaccactggggacagccagaaacaaaggcaggaggcaaaaccagcaaccccacctgaaaaactctgctctttatctcagccaaaggaaaagtcaaatcacagtggctgctcagcagcaccacattctaggagacaggcttcatgggtcttctgggcgtgaaccagctttcccacctagctgtggcatcccctttgggatcatccttcccagacaactgggtatcccctctgggacacccttccccccatttgggataggtagcactctgaatatttgcaagagctgaggcaattctgggtgtaaggcaccatctagtgccaaaaaggaggaagagatagaagattaagggacctcaggaggcaatcgcagagaacatctaagcaaacataccctataccctagaaagacaaaaacaagccagacagcaaagagtggaataaaaaactaatccttcaatgcagtcataggcatagtccacaagaaaca--acagcaaacagga---aactatgacctccccaaatggacaaagcaaggagccagtaactaaccctaacaagatagtaatgtgtgaggtctcagattgagaattcaaaatacagttctaaggaaactcagtgaacttcaagataacacagaaaagtagttcaggaa-tttttcagataaatttaacaaagagattgaaata--atagatataaaaaaacagaaatcctagaactgagaaacacatttgctgacctgaaaaattcattaaaggctcc--acagcagagttgatcaagcagaagaaagaatcagtgagctcaaagacagattatttgaaaatacagtgtaag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64647845 1325 + 155834243 tatgtaaataaaactgtagaataatattctttacagatatagatgcaaaaatcctcaacaaaacactaacaaactgaatgtgaataagattatacaccataagcaagtaagatttatcccaagaatgcaaatttgacttaatatatgaaaagcagggtgatgtcaccaaaatggcagagtagaagcaatcttgcttcattctcc--------------------------------------------------------------tccagtaacaagattacgacc----atgtttcaaaactcaa-------actgagacaaccccttggaccacagaaagattaaaaaatctgagcagatggtgaaagaaatggacttctctatccacaacacctct-cctcactctgccaggcacgaggtatggaaaattcctcctgtactcgcagtttttacactggaaaaagagagatcaagatcaatagccagctttcccaccatcttgggttccctttcaggaaagccattcttgccacaacccatgggaagcaatcagaagggcctgtagggataaaaatcactgagggcagccagagacaaaggcaggaggcaaaaccagcaaccccacctgaaaaactctgctttttatctcagccaaaggaaaagtcaaatcatagtggctgttcaacagtaccacattgcaggagacaggtttcatgggtcttcttggtataaactgactttcccacatagctggggcatcccctttggaaccatccttcccaaacagctgggtatcccctttgagacacgcttccccccatttgggatcagcagtgctctgaatatttgcaagagctgaggcaatcctgggtgtaaggcaccatctagtgccaaaaaggaggaagaggtcaaagattaagggacctcaataggcaattgcagagaacatctaagcaaacatgccctatgccctagaaagacaaaaacaagccagacagcaaagactggaataaa----taattcttcaatacagtcataggcatagtccacaagaaaca--acagcgaacatgg---aactatgacctccccaaatggacaaagcagggagccagtaaccagccctaacaagatagtaatgtgtgaggtctcagattgagaattcaaaatacagttttaaggaaactcagtgaacttcaagataacacagaaaagtagctcaggaa-tttatcagagaaatttaatgaagagattgaaata--atat---taaaaaaaaagaaatcctagaactgagaaatatatttgctgacctgaaaaattcattaaaggctctcaacattagaattgatcaagcagaagagagaatcagtgagctcaaagacaggttatttgaaaatacactgtaag i calJac3.chr7 C 0 I 16179 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=551402.000000 s hg38.chr1_KI270760v1_alt 81285 310 + 109528 aagaggaaaaagaaaaataaatttaaatagaactaaggaagcctacaaaatagagaaaataacctcaaaagagcaaatttaagagtaattagcacggaagagggagttgaagaagagcaacaggtagaaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagatataaatatccaggtatatggaggtcagagattaccaaattgatttaatccaaataagaccacccccaaggcatataacaatcaaactctcaaaggtcacggacaaagagaggattctaaaagcagcaaggt s panTro4.chr1 30517803 310 + 228333871 aagaggaaaaagaaaaataaatttaaatagaactaaggaagcctacaaaatatagaaaataacctcaaaagagcaaatttaagagtaattagcactgaagagggagttgaagaagagcaatgggtagaaaacttattcaaagaaataatttttaaaactttccaaacctagagaaagatataaatatccaggtatatggaggttagagattaccaaattgatttaatccaaataagaccacccccaaggcatataataatcaaactctcaaaggtcagggacaaagagaggattctaaaagcagcaaggt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30107046 310 - 229942017 aagaggaaaaagaaaaataaatttaaaaagaactaagaaagcctacaaaatatagaaaataacttcaaaagagcaaatttaggagtaattagcatggaagagggagttgaggaagagcaaggggtagaaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagttacaaatattcaggtatatggaggtcagagattaccaaattgatttaatccaaatgagaccacccccaaggcatataacaatcaaactctcaaaggtcagggacaaagagaggattctaaaagcagcaagag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33401849 302 + 229590362 gag------aagaaaaagaaatttaaaaagaactaagaaagcctacaaaatatagaaaataagctcaaaagagcaaatttaagagtaattagcatggaagagggagttgaggaaga--aagggatagaaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagatataaatatccaggtatatggaggtcagagattaccaaattgatttaatccaaataagaccacccccaaggcatataacaatcaaactctcaaaggtcagggacaaagagaggattctaaaagcatcaagag i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29913177 308 - 227556264 gagaagaaaaagaaaaagaaatttaaaaagaactaagaaagcctacaaaatatagaaaataagctcaaaagagcaaatttaagagtaattagcatggaagagggagttgaggaaga--aagggatagaaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagatataaatatccaggtatatggaggtcagagattaccaaattgatttaatccaaataagaccacccccaaggcatataacaatcaaactctcaaaggtcagggacaaagagaggattctaaaagcatcaagag i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32676695 302 + 220367699 gag------aagaaaaagaaatttaaaaagaactaagaaagcctacaaaatatagaaaataagctcaaaagagcaaatTTAAGAGTAATTAGCACGGAAGAGGGAATTGAGGAAGA--AAGGGATAGAaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagatataaatatccaggtaTATGGAGGTCAGAGATTACCAAATTGATTTAATCCAAATAAGACCACCCCCAAGGCATATAacaatcaaactctcaaaggtcagagacaaagagaggattctaaaagcatcaagag i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28193074 308 - 130588469 gagaagaaaaagaaaaagaaatttaaaaagaactaagaaagcctacaaaatatagaaaataagctcaaaagagcaaatttaagagtaattagcacggaagagggagttgaggaaga--aagggatagaaaacttattcaaagaaataattttaaaaactttccaaacctagagaaagatataaatatccaggtatatggaggtcagagattaccaaactgatttaatccaaataagaccacccccaaggcatataacaatcaaactctcaaaagtcagggacaaagagaggattctaaaagcatcaagag i chlSab2.chr20 C 0 I 1792 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64649170 16179 + 155834243 I a score=24411.000000 s hg38.chr1_KI270760v1_alt 81595 14 + 109528 aaaagaatcaaata s panTro4.chr1 30518113 14 + 228333871 aaaagaatcaaata i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30107356 14 - 229942017 aaaataatcaaata i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33402151 14 + 229590362 aaaagaatcagata i rheMac3.chr1 C 0 I 1605 s macFas5.chr1 29913485 14 - 227556264 aaaagaatcagata i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32676997 14 + 220367699 aaaagaatcagata i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28195174 14 - 130588469 aaaagaatcaaata i chlSab2.chr20 I 1792 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64649170 16179 + 155834243 I a score=476.000000 s hg38.chr1_KI270760v1_alt 81609 3 + 109528 acg s panTro4.chr1 30518127 3 + 228333871 acg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30107370 3 - 229942017 aca i ponAbe2.chr1 C 0 C 0 s macFas5.chr1 29913499 1 - 227556264 --g i macFas5.chr1 C 0 I 1795 s papAnu2.chr1 32677011 1 + 220367699 --g i papAnu2.chr1 C 0 I 1797 s chlSab2.chr20 28195188 1 - 130588469 --a i chlSab2.chr20 C 0 I 1 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64649170 16179 + 155834243 I e rheMac3.chr1 33402165 1605 + 229590362 I a score=273.000000 s hg38.chr1_KI270760v1_alt 81612 1 + 109528 t s panTro4.chr1 30518130 1 + 228333871 t i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30107373 1 - 229942017 t i ponAbe2.chr1 C 0 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64649170 16179 + 155834243 I e chlSab2.chr20 28195189 1 - 130588469 I e rheMac3.chr1 33402165 1605 + 229590362 I e papAnu2.chr1 32677012 1797 + 220367699 I e macFas5.chr1 29913500 1795 - 227556264 I a score=10176474.000000 s hg38.chr1_KI270760v1_alt 81613 5702 + 109528 aaaggagaggagctccgttgtgtctggcaacagacttttcggcagaaaccatacaggtcagaaaggagtggtatgatatatttaaggcactgaagg------aaaaaaaacctgtcaactgaaaatgttgtgcccagcaaagctttcccttatacatgaaagagaaataaagtatttttcagataaacaaaagttgagggaattcattaccactagactcatcttacaagaattctaaagcgagttcttcaaactg-aaagaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaagtaaatacacagacaaattcagaataatctaatactgtagttgtggtgtataatttcctcacatctctagtataaagactaaaagacaaatttatcaaaagtaattacaactatggcaac---ttaagaggcaatatgaaaagatgtaaattgaaacaagaaaaagccaaaatgtggggagatacagttaacatgtagagttttttagtttttcctttgtttcttttcttctctttgtgatcaaagctaagttatcttctgtttaaagtaacttgttttatttataagat-ttttttgtaagccccatggtaaccacaaaagcataaacctataatagatacactaaaaataaaaagcaatgaattaaaacatacaaccagg--aacaaaaatcacctaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagtaacaaaagggcaatagcaagtccttacctatcaataataacaatcaatgcaaatagactaaaatcttcaattaaaagacatagaacagctgaacgaataaaaaaaataagacccaaccatatgttgcctacaaaaaactcacttcacctgtaaagacacatgtagactg-aaagtaaagggatggaaaagatattctttgcaacagaaaccaagaaagactagatatagctacacttacatcagatgaaacagacttcaagtcaatggctataaaaagacacaaagtcactatgaaattataaatacatcaatttacaaagaggatataacaattgtaaatataaatgtacccaatcccaaagcacttcaatatataaagtaaacattaataaatctaaagggagagatagacttcaatataataatagtagaggacttcaacaccccattctcaataatggacagatcatccaaacagaaaatcaacaaagaaacatc--agttaaactacactctagaccaaatggacctaactgacatttacacaacatttcatctgactgctgtagaatagacaatcttctcatcaacatatggcacattttccaggacagaccatacatcagaccacaaaacaagtctgaac--attcacaaaagtagaaatcatatcaagtatcttttctgactatagtgaaataaactagaaatcaagaactaaagaaat------------ttggaaactacacaaatacatgaaaattaaacaacatggtcctgaatgataaatgggccaatgaagaaataaagaagaaaatttaaaaatttttgaaacaaatgaaaatggaaacacaacatctcaaaatctatgggatatagcaagagcagtactaagagggaagtttatagcaataaaaaaagaaataaaaagtaggatgatttcaaataaacaccctaatgatgaacttcaacaaactagaaaagtgagaacaaaccaaacccaaaattaatagaaggaaagaaataataaagatccaaacagaaataaattaaattgagactaaacaaataccaaaagttggttttttgaaaagataaacaaaatgtttttgaaaagaaaaacatttagctagactaaaaaaagagaagacacaaataaaaccagaaatgaaaagggaaattaactgatactatagaaatacaaaggatcactggagactaacatgaacaactacaagttaaaaaattggaaaatctggaagaaatgaataaattcccagatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatcaaagtagtaataaaatgtctctcatcaaagaaagcccaggacctgatggctccactgctgaactctaccaaatgtttgaagaagagctaataccaattctactcaaaccattccaaaaaattgaagatggaatatttccaaacccattctacaaggctaacattatcctgatcccaaaactggacaaggatacaacaataaagaaagcagcagacaaaaacatctgatgaacagagatgcaaaagtcctcaaaaaatattagcaaactgagttcaacaactcattaaaaagattatttaccatgcttaaggggattcatcctagggatgcaagtatggttcaacatacacaaatcaacaaatgtgatacatcagcttaatagaacaaaggacacaaacgatacaattatttcaatagatgctgaaaaagcaattgacaaaattcaacatcgctttatgacaaaaactctcaacaaactgaatacagaaggaacatgcctcaaaataataactgctgtatatgacatacccacagctaacgtcatatggaacagggaaaaattgaaagccttccctctaag-tctggaacaagacaatgatgcacactttcactacttttactcaacgtagtagtggaagtcctaggcagatcagctaggcaagagaaagaaataaagggcatccaaattggaaaggaagaagtcaacttattcttgttcacagatgacatgatattatatttagtaaaatcctaaagattccaccaaaaaactgttagaagtgataaatcaagtaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaacagtgaaaaatctg-aaaaaaaaatcatgaaagcaattccatctacaatagctacaaaaaatgtaaaatacctagaactaaatttaacaaagaagtgaaagatctttacaaggaaaactaaaaaacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagttatcccatgctcatggattgaaagaattaattgttaaaatgtcaatactattcaaagtgatctacaaactcattgcaatcactaccaaaataccaataacattcttcacagaaatag-aaaaaaattactaaaatttgtaaaggaccacaaaagactccaaataaccaaagcaatcgtaagaaaaagaacaaagctggaggcatcacctacctgacttccaaatatactacaaagccatagtaacctaaacagcatggtactggcaggaaatcagacacataagactgatggaacagaatagagaacccagatataagtccatgaatttatagccaactcatttctgacaaagggatcaagaacatac-tagaggaaaggacagtcttttcaataaatggtgctaggaaaactagata---agcagaatgaatctagacccctacctctcaccacatacaaaaatcagatcaaaatggattaaagacttaaatctaagacctgaaactatgaaattatgagaggaaaacactggggaaatactttaggaaaatttgggc-aagtttttttgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgggattccttcaggctaaaaagcttatatacagcaaagggaacaattgacaaagtgaagagacaacctacagagtaggagaagatatttgcaaactgtccatccaacaaggggctaataaccagaatacataaggaactcaaacaactcaacag-------aaaaaataaacgcgattttaaaatgggcaaaagatgtaaatagagatttctcaaaaaaagacatacaaatggccaacagac-atatgaaaaagaaatggtcaacattgctaatcgtcagggaaatgcaaatcaaaaccacagtgaaatatcatctcaccccagttaaaatgatttttatcaaaaagacaacaaataacagatgctggtgaggattcagagaaaggggaatgtttgtacactattgctgggaatgtaaattagtatagccactatggaaaacagtatagaggttc----------ctttaaaaactaaaaatagaactaccatgtaatacacataatcccactgctgggtgtttatccaaaagaaaggaaatggatatatcaaacagatacctgcactcttgtgtttattgaagtactattcacagtagtcaagatatgaaataaacctaaatatctatcactggatgaacagataaggaaaatgtcttacatatacacaaaggaatattattcagccataaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattgaaggccattaatgttaagtgaagttagccaggtgcaaagacaaatacagcttgttctaactcacatgcagtgagagcaaataagtggttctcatggagataaagagttgattggtggttaccagtggctggggagagtaagtggggtggagagaaaaaacagaggatcggttaatgggtatgaaaatggagttcaatagaaggaataagatctggtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttcaaaattgctgaagaagagaaattagaatgttcctaacataaagaaggggtgaatgtttggggtgatgaatgtccccattgccctggctcaatcattacacattgtaggtgtgtatcaaaataccacatatatccccaaaatatgtacaactattatgtatcaccaaaa------tgtatgtgtgtgtgtgtgtgtgtgtccaagagaaacctaagtatagatcaccactaattttaatgtggcatcctgaatgagatccaaggacattaggtaaaaactaaggaaatctgaataaagtatgaattggttagcaataatgtatcaatcgtggtctattaagtgtaagaaatgtatcgtactattctaaaatattaataacaggagaaagtgggtatagggtttaatgggaactctctatactacctttgaaattttttcctataagtctaaaactgttccaacaataaaattcattAAAATTTTTTAAATG---AAAAAATA-----AATTAAAATGGACAGATAACATTGTAAAAgaaaatcaatcaatgggatatatcaattagtagaataaagggcaaaagctgcattaacatctcaataaatgcacaaaaagcatttgtcaaaatctaccacactttcataacc-aaaaaaatcaataagcaaggaaatgatggaaattttctcaatctgacaaaggtcatctacaaaaacctcagttaacataatatgtagtggtgaaagactgaatgctttcccttgagatcagaagcaagcctagatatctaccctcgctacttctgttcaacattgtactggaggttctaggcagggaaattaggcaagaaaaagaaataaaaagcatccaaatggaaatggaaaaaattaaaactatctctatctgcagattagataatttttatatagaaaaccctaaggaatctatcaaaaatcattggctctaacaagcgagttcagcaaagttgaaggaatacaagatcaatacacaacaatcaagtgtgttt s panTro4.chr1 30518131 5708 + 228333871 aaaggagaggagctctgttgtgtctggcaacagacttttcggcagaaaccatacaggtcagaaaggagtggtatgatatatttaaggcactgaagg-------aaaaaaacctgtcaactgaaaatggtgtgcccagcaaagctttcccttatacatgaaagagaaataaagtatttttcagataaacaaaagttgagggaattcattatcactagactcatcttacaagaattctaaagcgagttcttcaaactg-aaagaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaagtaaatacacagacaaattcagaataatctaatactgtagttgtggtgtataatttactcacatctctagtataaagactaaaagacaaatttatcaaaagtaattacaactatggcaacttgttaagaggcaatataaaaagatgtaaattgaaacaagaaaaagtcaaaatgtggggagatacagttaacatgtagagttttttagtttttcctttgtttcttttcttctctttgtgatcaaagctaagttatcttctgtttaaagtaacttgttttatttataagatgttttttgtaagccccatggtaaccacaaaagcataaacctataatagatacactaaaaataaaaagcaatgaattaaaacatacaaccagg--aaaaaaaatcacctaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagtaacacaagggcaataacaagtccttacctatcaataataacaatcaatgcaaatagactaaaatcttcaattaaaagacatagagcagctgaacgaat-aaaaaaataagacccaaccatatgttgcctacaaaaaactcacttcacctgtaaagacacatgtagactg-aaagtaaagggatggaaaagatattctttgcaacagaaaccaagaaagactagatatagctacacttacatcagatgaaacagacttcaagtcaatggctataaaaagagacaaagtcactatgaaattataaatacatcaatttacaaagaggatatgacaattgtaaatataaatgtacccaatcccaaagcacctcaatatataaagtaaacattaataaatctaaagggagagatagacttcaatataataatagtagaggacttcaacaccccattctcaataatggacagatcatccaaacagaaaatcaacaaagaaacatc--agttaaactacactctagaccaaatgtacctaactgacatttacataacatttcatctgactgctgtagaatagacaatcttctcatcaacacatggcacattttccaggacagaccatacatcagaccacaaaataagtctgaacaaattcacaaaagtagaaatcatatcaagtatcttttctgactatagtgaaataaactagaaatcaagaactaaagaaat------------ttggaaactacacaaatacatgaaaattaaacaacatggtcctgaatgataaatgggccaatgaagaaataaagaagaaaactttaaaaattctgaaacaaatgaaaatggaaacacaacttctcaaaatctatgggatatagcaagagcagtactaagagggaagtttatagcaataaaaaaagaaataaaaagtaggatgatttcaaataaacaccctaatgatgaacttcaacaaactagaaaagtgaaaacaaaccaaacccaaaattaatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagactaaacaaataccaaaagttggttttttgaaaagataaacaaaatgtttttgaaaagaaaaacatttagctagactaaaaaaagagaagacacaaataaaaccagaaatgaaaagggaaattaactgatactat-gaaatacaaaggatcactggagactaacatgaacaactacaagttaaaaaattggaaaatctggaagaaatgaataaattcctggatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatcaaatttgtaataaaatgtctctcatcaaagaaagcccaggacctgatggctccactgctgaactctaccaaatgtttgaagaagagctaataccaattctactcaaaccattccaaaaaattgaagatggaatatttccaaacccattctacaaggctaacattatcctgatcccaaaactggacaaggatacaacaataaagaaaacagcagacaaaaacatctgatgaacagagatgcaaaagtcctcaaaaaatattagcaaactgagttcaacaactcattaaaaagattatttaccatgcttaaggggattcatcctagggatgcaagtttggttcaacatacacaaatcaacaaatgtgatacatcagcttaatagaataaaggacacaaacgatacaattatttcaatagatgctgaaaaagcaattgacaaaattcaacatcgctttatgacaaaaactctcaacaaactgaatacagaaggaacatgcctcaaaataataactgctgtatatgacatacccacagctaacatcatatggaacagggaaaaattgaaagccttccctctaag-tctggaacaagacaatgatgcacactttcactacttttactcaacatagtagtggaagtcctaggcagatcagctagg--aaagaaagaaataaagggcatccaaattggaaaggaagaactcaacttattcttgttcacagatgacatgatattatatttagtaaaatcctaaagattccaccaaaaaactgttagaagtgataaatcaagtaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaacagtgaaaaatctgaaaaaaaaaatcatgaaagcaattccatttacaatagctacaaaaaatgtaaaatatctagaaataaatttaacaaagaaatgaaagatctttacaaggaaaactaaaaaacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagttatcccatgctcatggattgaaagaattaattgttaaaatgtcaatactattcaaagtgatctacaaactcattgcaatcactaccaaaataccaataacattcttcacagaaatag-aaaaaaattactaaaatttgtataggaccacaaaagactccaaataaccaaagcaatcgtaagaaaaagaacaaagctggaggtatcacctacctgacttccaaatatactacaaagccatagtaacctaaacagcatggtactggcaggaaatcagacacataagactgatggaacagaatagagaacccagatataagtccatgaatttatagccaactcatttttgacaaagggatcaagaacatac-tagaggaaaggacagtcttttcaataaatggtgctaggaaaactagaca---agcagaatgaatctagacccctacctctcaccacatacaaaaatcagatcaaaatggattaaagacttaaatctaagacctgaaactatgaaattatgagaggaaaacactggggaaatactttaggacaatttgggc-aagtttttttgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgggattccttcaggctaaaaagcttatatacagcaaagggaacaatcgacaaagtgaagagacaacctacagagtaggagaagatatttgcaaactgtccatccaacaaggggctaataaccagaatacataaggaactcaaacaactcaacag-------aaaaaataaacgcgattttaaaatgggcaaaagatgtaaatagagatttctcaaaaaaagacatacgaatggccaacagat-atatgaaaaagaaatggtcaacattgctaatcatcagggaaatgcaaatcaaaaccacagtgaaatatcatctcaccccagttaaaatgatttttatcaaaaagacagcaaataacagatgctggtgaggattcagagaaaggggaatgtttgtacactattgctgagaatgtaaattagtatagccactatggaaaacagtatagaagttc----------ctctaaaaactaaaaatagaactaccatgtaatacacataatcccactgctgggtgtttatccaaaagaaaggaaatggatatatcaaacagatacctgcactcttgtgtttattgaagtactattcacagtagtcaagatatgaaatcaacctaaatatctatcactggatgaacagataaggaaaatgtcttacatatacacaaaggaatattattcagccataaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattgaaggccattaatgttaagtgaagttagccaggtgcaaagacaaatacagcttgttctaactcacatgcagtgagagcaaataagtggttctcatggagataaagagttgattggttgttaccagtggctgggaagagtaagtggggtggagagaaaaaacagaggatcggttaatgggtatgaaaatggagttcaatagaaggaataagatctggtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttcaaaattgctgaagaagagaaattagaatgttcctaacataaagaaggggtgaatatttgggatgatgaatgtccccattgccctggctcaatcattacacattgtaggtgtgtatcaaaataccacatatatccccaaaatatgtacaaccattatgtatcaccaaaa------tgta--tgtgtgtgtgtgtgtgtgtccaagagaaacctaagtatagatcaccactaattttaatgtggcatcctgaatgagatccaaggacattaggtaaaaactaaggaaatctgaataaagtatgacttggttagcaataatgtatcaatagtggtccattaagtgtaaaaaatgtatcgtactattctaaaatattaataacaggagaaagtgggtatagggtttaatgggaactctctatactacctttgaaattttttcctataagtctaaaactgttccaacaataaaattcattaaaattttttaaatg---aaaaaataaaatgaattaaaatGGACAGATAACATTGTAAAAgaaaatcaatcaatgggatatatcaattagtagaataaagggcaaaagctgcattaacatctcaataaatgcacaaaaagcatttgtcaaaatctaccacactttcataaccaaaaaaaatcaataagcaaggaaatgatggaaattttctcaatctgacaaaggtcatctacaaaaacctcagttaacataatatgtagtggtgaaagactgaatgctttcccttgagatcagaagcaagcctagatatctaccctcgctacttctgttcaacattgtactggaggttctaggcagggaaattaggcaagaaaaagaaataaaaagcatccaaatggaaatggaaaaaattaaaactatctctgtctgcagattagataatttttatatagaaaaccctaaggaatctatcaaaaatcattggctctaacaagcgagttcagcaaagttgaaggaatacaagatcagtacacaacaatcaagtgtgttt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30107374 5713 - 229942017 aaaggagaggagctctgtttggtctggcaacagacttttcagcagaaaccatacaggtcagaaaggagtggtatgatatatttaaggcactgaagg---aaaaaaaaaaacctgtcaactgaaaatgttgtgcccagcaaagctttcctttatacatgaaagagaaataaagtatttttcagataaacgaaagctgaaagaattcattaccactagactcgtcttacaagaattctaaagggagttcttcaaactg-aaagaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaggtaaatacacagacaaattcagaataatctaatgctgtagttgtggtgtataatttactcatatctctagtataaagactaaaagacaaatttatcaaaagtaattacaactatggcaacttgttaagaggcaatataaaaagatgtaaattgaaacaagaaaaagtcaaaatgtggggagatacagttaacatgtagagttttttagtttttcctttgtttcttttcttctctttgtgatcaaagctaagttatcttctgtttaaagtaacttgttttatttataagatgttttttgtaagccccatggtaaccac-aaagcataaacctataatagatgcactaaaaataaaaagcaatgaattaaaacatacaaccagg-aaaaaaaaatcacctaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagtaacaaaatggcaatagcaagtccctacctatcaataataacaatgaatgtaaatagactaaaatcttcaattaaaagacatagagcagctgaatgaat-aaaaaaa-aagacccaactatatgttgcctataaaaaactcacttcacctatgaagacacatgtagactg-aaagtaaagggatggaaaagatattctttgcaacagaaaccaagaaagaccggatatagctagacttacatcagatgaaatagacttcaagtcaatgggtataaaaagagacaaagtcactatgaaatgataaatacatcaatttacaaacaggatataacaattgtaaatataaatgtacccaatccaaaaacacttcgatatgtaaagtaaacattaataaatctaaagggagagatagacttcaatataataatagtagaggacttcaacaccccattctcaataatggatagatcatccaaacagaaaatcaacaaagaaacatcagagttaaactacactctagaccaaatggacctaactgacatttacacaacatttcatctgactgctgtagaatagacattcttctcatcaacacatggcacattttccaggacagaccataagtcagaccaaaaaaaaagtctgaacaaattcacaaaagtagaaatcatatcaagtatcttttctgactataatgaaataaactagaaatcaagaact-aagaaat------------ttggaaactacacaaatacatgaaaattaaacagcatggtcctgaatgataaatgggtcaatgaagaaataaggaagaaaatttaaaaatttttgaaacaaatgaaaatggaaacacaacatctcaaaatcaatgagatacagcaagggcagtactaagagggaagtttatagcattaaaaaaagaaataaaaagtaggatgatttcaaataaacaacctaatgatgcacttcaacaaactagaaaagtgagaacaaaccaaacccaaaattaatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagactaaacaaata-caaaagttggttttttgaaaagataaacaaaatgtttttgaaaagaaaaacatttagctacactaaaaaaagagaagacacaaataaaatcagaaatgaaaagggagattaactgatactatagaaatacaaaggatcattggagactaacatgaacaactataagttaaaaaattggaaaatctggaagaaatgaataaattcctggatgcatgcaacctaccaagattaaacctgaacagaccaataataagtaacaagatcaaagcagtaataaaatgtctctcatcaaagaaagcccaggacctgatggctccactgctgaactctaccaaatgtttgaagaagagctaatatcaattctactcaaactattccaaaaaattgaagatggaatacttccaaacccattctacaaggctaacattatcctgatcccaaaactggacaaggat---acaataaagaaaacaacagaccaaaacatctgatgaataaagatgcaaaagtcctcaaaaaatattagcaaactgcgttcaacaactcattaaaaagattatttaccatgctcaaggggattcatcccagggatgcaagtatggttcaacatacacaaatcaacaaatgtgatacatcaccttaatagaataaaggacacaaacaatacaattatttcgatagatgctgaaaaagcaattgacaaaattcaacatcgctttatgacaaaaactctcaaaaaactgaatacagaaggaacgtgcctcaaaataataactgctgtatatgacaaacccacagctaacatcatatggaacagggaaaaattgaaagccttccctctaagatctggaacaagacaatgatgcacgctttcactaattttactcgacatagtattggaagtcctaggcagatcagctaggcaagaaaaagaaataaagggcatccaaattggaaaggaagaagtcaacttattcttgttcacagatgacatgatattatatttagtaaaatcctaaagattccaccaaaaaactgttagaagtgataaatcaaacaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaatggtgaaaaatctg-aaaaaaaaatcatgaaagcaattccatttacaatagctacaaaaaatgtaaaatacctagaaataaatttaacaaagaagtgaaagatctttacaaggaaaactaaaaaacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagatatcccatgctcatggattgaaagaattaactgttaaaatgtcaatattacccaaagtgatctacaaactcaatgcaatcactaccaaaataccaataacattcttcacagaaatag-aaaaaaattactaaaatttgtatagaacaacaaaagactccaaataaccaaaacaatcgtaagaaaaagaacaaagctgaaggcatcacttacctgacttccaaatatactacaaagccatagtaacctaaacagcatagtactggcatgaaatcagacacataagactgatggaacagaatagagaacccagatataagtccatgcatttatagccaactcatttttgacaaagggatcaagaacatac-tagaggaaaggacagtcttttcaataaatggtgctaggaaaactagatatgcagaagaatgaatctagacccctacctctcaccacatacaaaaatcagatcaaaatggattaaagatttaaatctaagacctgaaactatgaaattatgagaggaaaacactggggaaatactttaggacaatttgggc-aagtttttttgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgggattccatcaggctaaaaagcttatatacagcaaagggaacaatcgacaaagtgaagagacaacctacagagtaggagaagatatttgcaaactgtccatccaacaaggggttaataaccagaatacataaggaactcaaacaactcaacag-------aaaaaataaacctgattttaaaatgggcaaaagatgtaaatagagatttctcaaaagaagacatacaaatgaccaacagataatatgaaaaagaaatggtcaacattgctaatcatcagggaaatgcaaatcaaaaccacagtgaaatatcatctcaccccagttaaaatgatttttatcaaaatgacaacaaataacagatgccagtgaggattcagagaaaggggaatgtttgtacactattgctggcaatgtaaattaatatagccactatggaaaacagtatagaggttc----------ctctaaaaactaaaactagaactaccatgtaatacacataatcccactgctgggtatttatccaaaagaaaggaaatagatatatcaaacagatacctgcactcttgtgtttattgaagtactattcacaatagtcaagatatgaaatcaacctaaatatctatcaatggatgaacagataaggaaaatgtcttacatatacacaatggaatattattcagccataaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattgaaggccattaatgttaagtgaagttagccaggtgcaaagacaaatacagcttgttctaactcacatgcagtgagagcaaataagtggttctcatggaggtaaagagttgattggtggctaccagtggctgggaagagtaagtggggtggagagaaaaaacagaggatcggttaatgggtacgaaaatagagttcaatagaaggaataagatccagtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttaaaaattgctgaagaagagaaattagaatgttcctaacataaagaaggggtgaatgtttggggtgatgaatgtccccattgccctggctcaatcattacacattgtagatgtgtatcaaaataccgcatatatccccaaagtatgtacaactattatgtatcaccaaaG------TGTA----TGTGTGCATGTGTGTGTccaagagaaacctaagtatagatcaccactaattttaatgtggcatcttgaatgagatccaagaacattaggtaaaaactaaggaaatctgaataaagtatgaattggttaacaataatgtatcaatagtgatccattaagtgtaagaaatgcatcacactattctaaaatattaataacaggagacagtgggtatagggtttaatgggaactctctatactacctttgaaattttttcctataagtctaaaactgttccaacaataaaattcattaaaattttttaaatg--aaaaaaataaaataaattaaaatGGACAGATAACATTGTAAAAgaaaatcaatcaatgggatatagcagttagtacaataaagggcaaaagctgcattaacatctcaataaatgcacaaaaagcatttgtcaaaatctaccacactttcataacc-aaaaaaaacaataagcaaggaaatgatggaaattttctcaatctgacaaaggtcatttacaaaaacctcagttaacataatatgtagtgatgaaagactgaatgttttcccttgagatcagaagcaagcctagatatctaccgtcgctacttccattcaacattgtactggaggttctaggcagggcaataaggcaagaaaaagaaataaaaaacatacgaatggaaatggaaaaaattaaaactatctctatttgaagattagataatttttatatagaaaaccctaaggaatctatcaaaaatcattgattctaacaagcaagttcagcaaagttgaaggaatacaagatcaatacacaacaatcaagtgtattt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33403770 5680 + 229590362 aaaggagaggagctctgttttgtctggcaacagacttttcagcagaaaccatacaggtcagaaaggagttgtatgatatatttaatgcactgaagg----aaaaaaaaaacctgtcaactgaaaatattgtgcccagcaaagctttcctttatacgtgaaagagaaataaagtatttttcagataaacaaaagctgagggaattcattaccactagaccaatcttacaataattctaaagggagttcttcaaactg-aaagaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaagtaaatacacagacaaattcataataatctaatactgtagttgtggtgtataatctactcatatctctagtacaaagactaaaagacaaatttatcaaaaataactataactatggcaacttgttaagatgcaatataaaaagatgtaaactgaaacaagaaaaagtcaaaatgtggagagacacagttaacatgtagagttttttagtttttcctttgtttcttttcttctctttttgaacaaagctaagttatcttctgtttaaagtaacttgttttatttataagatgttttttgtaagccccatggtaaccac-aaagcataaacctataatagatacactaaaaataaaaagcagtgaattaaaacatactactagg-aaaaaaaaatcacttaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagcaacaaaatggaaatagcaagtccttacctatcaataataacaatgaatgaaaatagactaaaatcttcaattaaaagacatagaactgctgaatgaat-aaaaaaataagacaaaactatacaattcatacaaaaaactcacttcacctataaagacacatgtagactg-aaagtaaagggatggaaaagatattttttgcaacagaaaccaagaaagaccagatatagctacacttacatcagatgaaatagacttcaagtcaatggctataaaaacagacaaagtcactatgaaatgataaatgtctcaatttacaaagaggatataacaatcataaatataaatgtacccaatgccaaagcacttcaatatataaagtaaacattaataaatctaaagggagagataaacttcaatataataacagtagaggacttcaacaccccattctcaataatggacagataatccaaacagaaaatcaacaaagaaacctcagagttaaactacactctagaccaaatggacctagctgacatttac---acatttcatctgactgctgcagaatagacattcttctcatcaacacatggcacattttccaggacagaccatatgtcagactacaaaacaagtctgaacaaattcacaaaagtagaaatcatatcaagtatcttttctgactataatgaaacaaactagaaatcgagaactaaagaaac------------ttggaaactacacaaatacatgaaaattaaacaacatggtcctgaacgattaataggtcaatgaagaaataaagaagaaaatttaaaaatttttgaaacaaatgaaaatggaaacacaacatctcaaagtctatgggatatagcaagagcagtactaagagggaagtttatagcaat-aaaaaagaaattaaaagtaggatgatttcaagtaaacaacctaatgatgcacttcaagaaattagaaaagtgagaacaaaccaaatctaaaattgatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagactaaaagaataccaaaagttgggtttttgagaagataaacaaaatatttttgaaaagaaaaacatttagctaggctaaaaaaa-agaagacacaaataaaatcagaaatgaaaagggagactaactcatactatagaaatacaaaggatcattggagactaacataaacaactataagttaaaaaattggaaaacctggaagaaatgaataaattcctggatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatcaaagtagtaataaaatgtctcttatcaaagaaagctcaggaactgatggctccactgctgaaatctatcaaatgtttgaagaagagctaataccaattctactcaaaccattcaaaaaaattgaagatggaatacttttgaactcattctacaaggctaacattatcctgatcccaaaactggacaaggatacaacaaaaaagaaaacaacagaccaaaacatctgatgaacagagatgcaaaa-tcctcagcaaatattagcaaactgagttcaacaactcattaaaaagattatttaccatgctcaaggggattcatcccagtgatgcaagtatggttcaacatatgcaaatcaataaatgtgatacatcgcctcaatagaataaaggacacaaaccatagaattatttcaatagatgctgaaaaagcaattgaaaaaattcaacatccctttatgacaaacactctcaacaaac--aatatagaaagaacatgcctcaaaataataatggctgcatatgacaaacccacagctaatatcatatggaacagggaaaaattgaaagccttccctctaagatctggaacaagacaatgatgcacgcttttactacttttactcaacatagtattggaagtcctaggctgag----------agagaaagaaataaagggcatccaaattggaaaggaagaagtcaacttattcttgttcacagatg-----------tat----------------gattccaccaaaaaactgttagaactgataaaccaagtaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaacggtgaaaaatctg-aaaaaaaaatcatgaaagtaattccaattacaatagctataaaaaatataaaatacctagaaataaatttaacaaagaagtgaaagatctttacaaggaaaactaaaagacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagatatcccatgctcatggattgaaagaattaactgttaaaatgtcaatactacccaaagtgatctacaaactcaatgcaatcactaccaaaataccaatgacattcttcacagaaatagaaaaaaaattactaaaatttgtatagaaccacaaaagactccaaacaaccaaagcaatcctaagaaaaagaacaaagctggaggcatcacctaactgacttccaaatatactacaaagccatagtaatctaaacagcatggtactggtgtgaaaacagacacatacgactgatggagcagaatagagatcccagatataaatccatgcatttatagtcaactcgtttttggcaaaagcatcaagaacataaatagaggaaaggatagtcttttcaataaatagtgccaggaaaactagatatgcagaataatgaatctagacccctacctctcaccacatacaaaaatcagaccaaaatggattaaagatttaaatctaaaacctgaaaccatgaaattacaagaggaaaacattgggaaaatgctttaggacaatttgggcaaaggttttttgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgagattccatcaggctaaaaagcttatatacagcaaaaggaacaatcaacaaagtgaagagataacctacagaggaggagaagatatttataaactgtccatccaacaaggggttaataaccagaatacataaggaactcaaacaattcaacag---aaaaaaaaaaaaaatctgattttaaaatgggcaaaagatgtagatagagatttctcaaaagaagacatacaaatggccaacaggt-atatgaaaaagaaatggtcagcatggctaatcgtcagggaaatgcaaatcaaaaccacagtgaaatatcatctcatcccagttaaaatgatttttatcaaaaaga---taaataacagatgctggtgaggattcagagaaaagtgaatgtttgtacactattgctgggaatgtaaattagtacagtcactatggaaaacagtatggaggttc----------ctctaaaaactaaaaatagaactaccatgtaatgcacataatccctctgctgggtatttatccaaaagaaaggaaattgatgtatcaaagagatacctgcacttttgtgtttattgaagtactattcacaatagtcaagatatgaaatcaacctaaatagctatcagtggatgaacagataaggaaaatgtcttgcatatacacaatggaatattattcagccacaaaaagaatgaaatcctgtcattttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------nnnnnnnnngaagttagccaggtgcaaagacaaatactgcttgttctaactcacatgcagtgagagcaaataagtggttctcatgcaggtaaagagttgattggtggttaccagtgtctgggaaggataagtgggttggagagaaaaaacagaggatcggttaatgggtatgaaaatggagttcaatagaaggaataagatctagtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttcaaaattgctgaagaaaagaaattagaatgttcctaatataaagaaggggtgaaattttggggtgatgaatgtccccattgccctggctcaatcattacacattgtaggtgtgtatcaagataccacatatatccccaaaatatgtacaactattatgtattgctaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccaagagaaacctaagtatagatcaccactaattttaatgtggcatcctgaatgagatccaaggacattaggtaaaaactaaggaaatctgaataaagtatgaattggttaacaataatgtatc-atagtggtccattaagtgtaagaaatgtatcatactattctaaaatattaataacaggagaaagtgggtagagggcttaatgggaactccctatactacctttgaaattttttcctataagcctaaaactgttccaacaataaaattcattaaaatttttaaaatg-aaaaaaaata-----aattaaCATGGACAGATAACATTGTAAAAgaaaataaatcaatgggatatatcaattagtagaataaagggcaaaaactgcattagcatctcaataaatgcacaaaaagcatttgtcaaaatctaccacactttcataac--aaaaaaatcaataaacaaggaattgatggaaattttctcaatctgacaaaggtcatctacaaaaacctcagttaacataatatgtagtggtgaaagactgaatgttttcccttgagatcagaagcaagcctagatatctaccctcgctacttctgctcaacattgtactggaggttctaggcagggcaattaggcaagaaaaataaattaaaagcatccaaatggaagtggaaaaaaattaaactatctctatttgtagattagataatttttatatagaaaaccctaaggaatctatcaaaaatcgttgactctaacaagcgagttcagcaaagttgaaggaatacaagatcaatacacaactatcaagtgtattt i rheMac3.chr1 I 1605 C 0 s macFas5.chr1 29915295 5670 - 227556264 aaaggagaggagctctgttttgtctggcaacagacttttcagcagaaaccatacaggtcagaaaggagttgtatgatatatttaatgcactgaagg----aaaaaaaaaacctgtcaactgaaaatattgtgcccagcaaagctttcctttatacgtgaaagagaaataaagtatttttcagataaacaaaagctgagggaattcattaccactagaccaatcttacaataattctaaagggagttcttcaaactg-aaagaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaagtaaatacacagacaaattcataataatctaatactgtagttgtggtgtataatctactcatatctctagtacaaagactaaaagacaaatttatcaaaaataactataactatggcaacttgttaagatgcaatataaaaagatgtaaactgaaacaagaaaaagtcaaaatgtggagagacacagttaacatgtagagttttttagtttttcctttgtttcttttcttctctttttgaacaaagctaagttatcttctgtttaaagtaacttgttttatttataagatgttttttgtaagccccatggtaaccac-aaagcataaacctataatagatacactaaaaataaaaagcagtgaattaaaacatactactaggaaaaaaaaaatcacttaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagcaacaaaatggcaatagcaagtccttacctatcaataataacaatgaatgaaaatagactaaaatcttcaattaaaagacatagaactgctgaatgaat-aaaaaaataagacccaactatatgctgcctacaaaaaactcacttcacctataaagacacatgtagactg-aaagtaaagggatggaaaagatattttttgcaacagaaaccaagaaagaccagatatagctacacttacatcagatgaaatagacttcaagtcaatggctataaaaacagacaaagtcactatgaaatgataaatgtctcaatttacaaagaggatataacaatcataaatataaatgtacccaatgccaaagcacttcaatatataaagtaaacattaataaatctaaagggagagataaacttcaatataataacagtagaggacttcaacaccccattctcaataatggacagataatccaaacagaaaatcaacaaagaaacatcagagttaaactacactctagaccaaatggacctagctgacatttac---acatttcatctgactgctgcagaatagacattcttctcatcaacacatggcacattttccaggacagaccatatgtcagactacaaaacaagtctgaacaaattcacaaaagtagaaatcatatcaagtatcttttctgactataatgaaacaaactagaaatcgagaactaaagaaac------------ttggaaactacacaaatacatgaaaattaaacaacatggtcctgaacgattaataggtcaatgaagaaataaagaagaaaatttaaaaatttttgaaacaaatgaaaatggaaacacaacatctcaaagtctatgggatatagcaagagcagtactaagagggaagtttatagcaat-aaaaaagaaattaaaagtaggatgatttcaagtaaacaacctaatgatgcacttcaagaaattagaaaagtgagaacaaaccaaatctaaaattgatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagactaaaagaataccaaaagttgggtttttgagaagataaacaaaatatttttgaaaagaaaaacatttagctaggctaaaaaaa-agaagacacaaataaaatcagaaatgaaaagggagactaactcatactatagaaatacaaaggatcattggagactaacataaacaactataagttaaaaaattggaaaacctggaagaaatgaataaattcctggatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatcaaagtagtaataaaatgtctcttatcaaagaaagctcaggaactgatggctccactgctgaaatctatcaaatgtttgaagaagagctaataccaattctactcaaaccattcaaaaaaattgaagatggaatacttttgaactcattctacaaggctaacattatcctgatcccaaaactggacaaggatacaacaaaaaagaaaacaacagaccaaaacatctgatgaacagagatgcaaaa-tcctcagcaaatattagcaaactgagttcaacaactcattaaaaagattatttaccatgctcaaggggattcatcccagtgatgcaagtatggttcaacatatgcaaatcaataaatgtgatacatcgcctcaatagaataaaggacacaaaccatagaattatttcaatagatgctgaaaaagcaattgaaaaaattcaacatccctttatgacaaacactctcaacaaac--aatatagaaagaacatgcctcaaaataataatggctgcatatgacaaacccacagctaatatcatatggaacagggaaaaattgaaagccttccctctaagatctggaacaagacaatgatgcacgcttttactacttttactcaacatagtattggaagtcctaggctgag----------agagaaagaaataaagggcatccaaattggaaaggaagaagtcaacttattcttgttcacagatg-----------tat----------------gattccaccaaaaaactgttagaactgataaaccaagtaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaacagtgaaaaatctg--aaaaaaaatcatgaaagtaattccaattacaatagctataaaaaatataaaatacctagaaataaatttaacgaagaagtgaaagatctttacaaggaaaactaaaagacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagatatcccatgctcatggattgaaagaattaactgttaaaatgtcaatactacccaaagtgatctacaaactcaatgcaatcactaccaaaataccaatgacattcttcacagaaatagaaaaaaaattactaaaatttgtatagaaccacaaaagactccaaacaaccaaagcaatcctaagaaaaagaacaaagctggaggcatcacctaactgacttccaaatatactacaaagccatagtaatctaaacagcatggtactggtgtgaaaacagacacatacgactgatggagcagaatagagatcccagatataaatccatgcatttatagtcaactcgtttttggcaaaagcatcaagaacataaatagaggaaaggatagtcttttcaataaatagtgccaggaaaactagatatgcagaataatgaatctagacccctacctctcaccacatacaaaaatcagaccaaaatggattaaagatttaaatctaaaacctgaaaccatgaaattacaagaggaaaacattgggaaaatgctttaggacaatttgggcaaaggttttctgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgagattccatcaggctaaaaagcttatatacagcaaaaggaacaatcaacaaagtgaagagataacctacagaggaggagaagatatttataaactgtccatccaacaaggggttaataaccagaatacataaggaactcaaacaattcaacag------aaaaaaaaaaatctgattttaaaatgggcaaaagatgtagatagagatttctcaaaagaagacatacaaatggccaacaggt-atatgaaaaagaaatggtcagcatggctaatcgtcagggaaatgcaaatcaaaaccacagtgaaatatcatctcatcccagttaaaatgatttttatcaaaaaga---taaataacagatgctggtgaggattcagagaaaagtgaatgtttgtacactattgctgggaatgtaaattagtacagtcactatggaaaacagtatggaggttc----------ctctaaaaactaaaaatagaactaccatgtaatgcacataatccctctgctgggtatttatccaaaagaaaggaaattgatgtatcaaagagatacctgcacttttgtgtttattgaagtactattcacaatagtcaagatatgaaatcaacctaaatagctatcagtggatgaacaggtaaggaaaatgtcttgcatatacacaatggaatattattcagccacaaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattggaggccattaatgttaagtgaagttagccaggtgcaaagacaaatactgcttgttctaactcacatacagtgagagcaaataagtggttctcatggaggtaaagagttgattggtggttaccagtgtctgggaaggataagtgggttggagagaaaaaacagaggatcggttaatgggtatgaaaatggagttcaatagaaggaataagatctagtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttcaaaattgctgaagaaaagaaattagaatgttcctaatataaagaaggggtgaaattttggggtgatgaatgtccccattgccctggctcaatcattacacattgtaggtgtgtatcaagataccacatatatccccaaaatatgtacaactattatgtattgctaaaa--------tgtgtgtgtgtgtgtgtgtgtgtccaagagaaacctaagtatagatcaccactaattttaatgtggcatcctgaatgagatccaaggacattaggtaaaaactaaggaaatctgaataaagtatgaattggttaacaataatgtatc-atagtggtccattaagtgtaagaaatgtatcatactattctaaaatattaataacaggagaaagtgggtagagggcttaatgggaactccctatactacctttgaaattttttcctataagcctaaaactgttccaacaataaaattcattAAAATTTTTAAAATGAAAAAAAAATA-----AATTAACATGGACAGATAACATTGTAAAAgaaaataaatcaatgggatatatcaattagtagaataaagggcaaaaactgcattagcatctcaataaatgcacaaaaagcatttgtcaaaatctaccacactttcataac--aaaaaaatcaataaacaaggaattgatggaaattttctcaatctgacaaaggtcatctacaaaaacctcagttaacataatatgtagtggtgaaagactgaatgttttcccttgagatcagaagcaagcctagatatctactctcgctacttctgctcaacattgtactggaggttctaggcagggcaattaggcaagaaaaagaaattaaaagcatccaaatggaagtggaaaaaaattaaactatctctatttgtagattagataatttttatatagaaaaccctaaggaatctatcaaaaatcgttgactctaacaagcgagttcagcaaagttgaaggaatacaagatcaatacacaactatcaagtgtattt i macFas5.chr1 I 1795 C 0 s papAnu2.chr1 32678809 5681 + 220367699 aaagGAGAGGAGCTCTGTTTTGTCTGGCTacagacttttcagcagaaaccatacAGGTCAGAAAGGAGTTGTATGATATATTTAAtgcactgaagg---aaaaaaaaaaacctgtcaactgAAAATATTGTGCCCAGCAAAGCTTTCCTTTATacgtgaaagagaaataaagtatttttcagataaacaaaagctgagggaattcattaccactagaccaaTCTTACAATAAttctaaagggagttcttcaaactg-aaagaaaaagacactaatgtgcaagaagaaaatatttgaaggtaTAAAATTCACTGGGAAAAGTAAATACACAGACAAATTCATAATAATCTAATACTGTAGTTGTGGTATATAATCTACTCATATCTCTAGTACAAAGACTAAAAGACAAATTTATCCAAAATAACTATAACTATGGCAACTTGTTAAGaagcaatataaaaagatgtaaactgaaagaagaaaaagtcaaaatgtgGAGAGACACAGTTAACATGTagagttttttagtttttcctttgtttcttttcttctctttttgaacAAAGCTAAGTTATCTTCTGTTTAAAGTAACTTGTTTTATGTATAAGATGTTTTTTGTAAgccccatggtaaccac-aaagcataaacctataatagatacactaaaaataaaaagcagtgaattaaaacatactactagg-aaaaaaaaatcacttaaccacaaaggaagacaggagttattatacaaaacaaccaaaaaacaagcaacaaaatggcaatagcaagtccttacctatcaacaataacaatgaatgaaaatagactaaaatcttcaattaaaagacatagaactgctgaatgaat-aaaaaaataagacccaactatatgctgcctacaaaaaactcacttcacctataaagacacatgtagactg-aaagtaaagggatggaaaagatATTTTTTGCAACAGAAACCAAGAAAGACCAGATACAGCTACACTTACATCAGATGAAATAGACTTCAAGTCAATGgctataaaaacagacaaagtcactatgaaatgataaatgtatCAATTTACAAAGAGGATATAACAATCGTAAATATAAATGTACCCAATGCCAAAGCACTTCAATATATAAAGTAAACATTAAtaaatctaaagggagagataaaCTTCAATATAATAACAGTagaggacttcaacaccccattctCAATAATGGACAGATaatccaaacagaaaatcaacaaagaaacatcagagttaAACTACactctagaccaaatggacctagcTGACATTTAC---ACATTTCATCTGACTGCTgcagaatagacattcttctcatCAACACATGGCACATTTTCCAGGACAGACCATATGTCAGACTACAAAACAAGTCTGAACAAATTCACAAAAgtagaaatcatatcaagtatcttttctgactatAATGAAACAAACTAGAAATCGAGAACTAAAGAAACATGGAAACTACACtggaaactacacaaatacatgaaaattaaacaacatggtCCTGAACAATTAataggtcaatgaagaaataaagaagaaaattaaaaattttttgaaacaaatgaaaatggaaacacaacatctCAAAGTCTATGGGATATAGCAagagcagtactaagagggaagtttatagcaat-aaaaaagaaattaaaagtaggatgatttcaaataaacaacctaatgatgcacttcaagaaattagaaaagtgAGAACAAACCAAATCTAAAATtgatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagACTAAAAGAATACCAAAAGTTGGGTTTttgagaagataaacaaaatgtttttgaaaagaaaaacatttaactaggctaaaaaaa-agaagacacaaataaaatcagaaatgaaaagggagacTAACTCATActatagaaatacaaaggatcattggAGACTAACATAAACAACTATAagttaaaaaattggaaaacctggaagaaatgaataaattcctggatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatCAAAGTAGTAATAAAATGTCTCTTATCAAAGAAAGCTCAGGAACTGATGGCTCCACTGCTGAAATCTATCAAATGTTTGAAGAAGagctaataccaattctactcaaaccattccaaaaaattgaagatggAATACTTCtgaactcattctacaaggctaaCATTATCCTGATCCCAAAACTGGACaaggatacaacaaaaaagaaaacaacagaccaaAACATCTGATGAACAGAGATGCAAAA-TCCTCagcaaatattagcaaactgagtTCAACAActcattaaaaagattatttaccATGCTCAAGGTGATTCATCCCAGTGATGCAagtatggttcaacatatgcaaatcaataaatgtgatacatcacctCAATAGAATAAAGGACACAAACCATagaattatttcaatagatgctgaaaaagcaattgaaaaaattcaacatccctttatgacaAACACTCTCAACAAAC--AATATAGAAagaacatgcctcaaaataataatggctgcatatgacaaacccacagctaatatcatatggaacagggaaaaattgaaagccttccctctaagatctggaacaagacaatgaTGCACGCTTTTACTACTtttactcaacatagtattggaagtcctaggctgag----------agagaaagaaataaagggcatccaaattggaaaggaagaagtcgaCTTATTCTTGTTCACAGATG-----------TAt----------------gattccaccaaaaaactgttagaactgataaaccaAGTAAAGTTACAAGAT-aaaaattgacatacaaaaattagtagcatttatgtatgccaacagtgaaaaatctg-aaaaaaaaatcatgaaagtaattccaattacaatagctataaaaaatataaaatacctagaaataaatttaacgaagaagtgaaagatctttacaaggaaaactaaaagacactgatgaaagaaattcatTATTGAggatgaaaaacatgaaaagatatcccatgctcatggattgaaagaattaactgttaaaatgtcaatactacccaaagtgatctacaaacTCAATGCAATCactaccaaaataccaatgacattcttcacagaaatag-aaaaaaattactaaaatttgtatagaaccacaaaagactccaaacaaccaaagcaatcctaagaaaaagaacaaagctggaggcatcacctaACTGACTTccaaatatactacaaagccatagtaatctaaacagcatggtactggaatgaaaacagacacatacgaCTGATGGAGCAGAATAAAGATCCCAgatataaatccatgcatttatagTCAACTCGTTTTTGACAAAAGCATCAAGAACATAAATagaggaaaggatagtcttttcaataaatagtgccaGGAAAACTagatatgcagaataatgaatctagacccctacctctcaccacatacaaaaatcagaccaaaatggattaaagatttaaatctaaaacctgaaaccatgAAATTACAAgaggaaaacattggggaaatgcttTAGGACAATTTGGGCAAAGGTTTTTTGGGTAAGACcttaaaaacacaggcaacaaaagcaaaaataaacaaatgagattcCATCAGGCTAAAAAGCTTATATACAGCAAAAggaacaatcaacaaagtgaagagataacctacaGAGTAGGAGAAGATATTTATAAACTGTTCATCCAACAAGgggttaataaccagaatacataaggaactcaaacaattcaacagaaaaaaaaaaaaaaaaatctgattttaaaatgggcaaaagatgtagATAGagatttcccaaaagaagacatacaaatggccaacaggt-atatgaaaaagaaatggtCAGCATggctaatcatcaggaaaatgcaaatcaaaaccacagtgacatatcatctcatcccagttaaaatgatttttatcaaaaaga---taaataacagatgctggtgaggattcAGAGAAAAGTGAATGTTTGTACACtattgctgggaatgtaaattagtacagtcactatggaaaacagtatagaggttc----------ctctaaaaactaaaaatagaactaccatgtaaTGCACATAATCCCTctgctgggtatttatccaaaagaaaggaaattgatgtatcaaagagatacctgcactttTGTGTTTATTgaagtactattcacaatagtcaagatatgaaatcaacctaaatagCTATCAGTGGAtgaacagataaggaaaatgtcttgcatatacacaatggaatattattcagccacaaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattggaggccattaaTGTTAAGTGAAGTTAGCCAGGTGCAAAGACAAATACTGCTTGTTCTAACTCACATGCAGTGAGAGCAAATAAGTGGTTCTCATGGAGGTAAAGAGTTGATTGGTGGTTACCAGTGTCTGGGAAGGATAAGTGGGTTGAAGAGAAAAAACAGAGGATCGGTTAATGGGTATGAAAATGGAGTtcaatagaaggaataagatctagtgttctatagcacagtggggcaactatagttaacaataatttgttgtataGTTCAAAAttgctgaagaaaagaaattagaatattCCTAATATAAAGAAGGGGTGAAATTTTGGGGTGATGAATGTCCCCATTGCCCTGGCtcaatcattacacattgtaggTGTGTATCAAGATACCACATAtatccccaaaatatgtacaactattatgtattgctaaaa--------------tgtgtgtgtgtgtgtgtccaagaGAAACCTAAGTATAGATCACCACTAATTTTAATGTGGCATCCTGAATGAGATccaaggacattaggtaaaaactaaggaaatctgaataaagtatgaattggttaacaataatgtatc-atAGTGGTCCATTAAGTGTAAGAAATGTATCATactattctaaaatattaataacaggAGAAAGTGGGTAGAGGGCTTAATGGGAACTCCCTATACTACCTTTGAAATTTTTTCCTATAAGCCTAAAACTGTTCCAAcaataaaattcattaaaatttttaaaatgaaaaataaaga-----aattaacatggacagataacattgtaaaagaaaataaatcaatggaatataTCAATTAGTAGAATAAAGGGCAAAAACTGCATTAACATCTCAATAAATGCACaaaaagcatttgtcaaaatctACCACACTTtcataac--aaaaaaatcaataaacaaggAATTGATGGAAATTTTCTCAATCTGACAAAGGTCATCTACAAAAACCTCAGTTAACATAATATGtagtggtgaaagactgaatgctttcccttgAGATCAGAAGCAAGCCTAGATATCTACCCTCGCTACTTCTgctcaacattgtactggaggttctaggcagggcaattaggcaagaaaaagaaattaaaagcatcCAAATGgaagtggaaaaaaattaaactatctctatttgtagattagataatttttatatagaaaaccctaaggaaTCTATCAAAAATCGTTGACTCTAACAAGCGAGTTCAGCAAAGTTGAAGGAATACAAGATCAATACACAACTATCAAGTGTATTT i papAnu2.chr1 I 1797 C 0 s chlSab2.chr20 28195190 5679 - 130588469 aaaggagaggagctctgttttctctggcaacagaattttcagcagaaaccatacaggtcagaaaggagttgtatgatatatttaatggactgaaggaaaaaaaaaaaaaacctgtcaactgaaaatattgtccccaacaaagctttcctttatacgtgaaagagaaataaagtatttttcagataaacaaaagctgagggaattcattaccactagaccaatattacaataattctaaagggagttcttcaaactgaaaaaaaaaagacactaatgagcaagaagaaaatatttgaaggtataaaattcactgggaaaagtaaaaacactgacaaactcataataatctaatactgtagttgtggtatataatctactcatatctctagtacaaagactaaaagacaaatttatcaaaaataactacaactatggcaacttgttaagaagcaatataaaaagatataaactgaaacaagaaaaagtcaaaatgtggggagacacagttaacatgtagagttttttagtttttcctttgttttttttcttctctttttgaacaaagttaagttatcttctgtttaaagtaacttgttttatttataagatgttttttgtaagccccatggtaaccac-aaagcataaacctacaatagatacactaaaaataaaaagcagtgaattaaaacatactaccagg-aaaaaaaaatcacttaaccacaaaggaagacaggagtttttatacaaaacaagcaaaaaacaagcaacaaaatggcaatagcaagtccttacctatcagtaacaacaatgaatgcaaatagactaaaatcttcaattaaaagacatagaactgctgaatgaat-taaaaaa-aagaccaaactatatgctgcctacaaaaaactcacttcacctataaagacacatgtagactgaaaagtaaagggatggaaaagatattttttgcaacagaaaccaagaaagaccagatatagctacacttatatcagatgaaatagacttcaagtcaatggctataaaa----acaaagtcactatgaaatgataaatgtatcaatttacaaagaggatataacaatcataaatataaatgtacccaatgccaaagcacttcaatatataaagtaaacattattaagtctaaagggagagatagacttcaatataataacagtagaggacttcaacaccccattctcaataatggacagataatccaaaaagaaaatcaacaaagaaacatcagagttaaactacactctagaccaaatggacctagctgacatttacacaacatttcatctgactgctgcagaatagacattcttctcatcaacacatggcacattttccaggacagaccatatgtcagtccacaaaacaagtctgaacaaattcacaaaagtagaaatcatatcaagtatcttttctgactataatgaaacaaactagaaatcaagaactaaagaaac------------ttggaaactacacaaatacatgaaaattaaacaacatggtcctgaacgattaacaggtcaatgaagaaataaagaagaaaatttaaaaatttttgaaacaaatgaaaatggaaacacaacatctcaaagtctatgggatatagcaagagcagtactaagagggaagtttatagcaat-aaaaaagaaataaaaagtaggatgatttcaaataaacaacctaatgatgcacttcaagaaatttaaaaagtgagaacaaaccaaacccaaaattaatagaaggaaagaaataataaagatccaagcagaaataaattaaattgagactaaaagaacaccaaaagttgggtttttgagaagataaacaaaatgtttttgaaaagaaaaacatttagctaggctaaaaaaa-agaagacacaaataaaatcagaaatgaaaagggagactaactgatactgtagaaatacaaaggatcattggagactaacatgaacaactataagttaaaaaattggaaaacctggaagaaatgaataaattcctggatgcatacaacctaccaagattaaacctgaacagaccaataatgagtaacaagatcaaagtagtaataaaatgtctcttatcaaagaaagctcaggaactgatggctctactgctgaaatctatcaaatgtttgaagaagagctaataccaattctactcaaaccattccaaaaaattgaagatggaatacttccgaactcattctacaaagctaacattatcctgatcccaaaactggacaaggatacaacaaaaaagaaaacaacagaccaaaacatctgatgaacagagatgcaaaa-tcctcagcaaatattagcaaactgagttcaacaactcattaaaaagattatttaccattctcaaggggattcatcccagtgatgcaagtatggttcaacatatgcaaatcaataaatgtgatacatcacctcaatagaataaaggacacaaaccatacaattatttcaatagatgctgaaaaagcaattgaaaaaattcaacatccttctatgacaaaaactctcaacaaactgaatatagaaagaacatgcctcaaaataataatggctgcatatgacaaacccacagctaacgtcatatggaacagggaaaaattgaaagccttccctctaagatctggaacaagacaatgatgcacacttttactacttttactcaacatagtattggaagtgctaggctgag----------agagaaagaaataaagggcgtccaaattggaaaggaagaagtcaacttattcttgttcacagatg-----------tat----------------gattccaccaaaaaactgttagaactgataaaccaagtaaagttacaagataaaaaattgacatacaaaaattagtagcatttatgtatgccaacagtgaaaaatctg--aaaaaaaatcatgaaagtaattccacttacaatagctataaaaaatataaaatacctagaaataaatttaacgaagaagtgaaagatctttacaaggaaaactaaaagacactgatgaaagaaattcattattgaggatgaaaaacatgaaaagatatcccatgctcatggattgaaagaattaactgttaaaatgtcaatactacccaaagtgatctacaaactcaatgcaatcactaccaaaataccaatgacattcttcacagaaacag-aaaaaaattactaaaatttgtatagaaccacaaaagactccaaacaaccaaagcaatcctaagaaaaagaacaaagctggaggcatcacctacctgacttccaaatatactacaaagccatagtaatctaaacagcatggtactggcatgaaaacagacacatatgactgatggagcagaatagagatcccagatataaatccatgcatttatagtcaactcgtttttgacaaaggcatcaagaacatacatagaggaaaggatagtcttttcaataaatggtgccaggaaaactagatatgcagaataatgaatctagacccctacctctcaccacatacaaaaatcagaccaaaatggatcaaagatttaaatctaaaacctgaaaccatgaaattacaagaggaaaacattgggaaaatgctttaggacaatttgggcaaaggttttttgggtaagaccttaaaaacacaggcaacaaaagcaaaaataaacaaatgggattccatcaggctaaaaagcttatatacagcaaaaggaacaatcaacaaagtgaagagacaacctacagagtaggagaagatatttataaactgtccatccaacaaggggttaataaccagaatacataaggaactcaaacaactcaacag------aaaaaaaaaaatctgattttaaaatgggcaaaagatg----tagagatttctcaaaagaagacatacaaatggccaacagtt-atatgaaaaagaaatggtcagcatggctaatcgtcagggaaatgcaaatcaaaaccacagtgaaatatcatctcatcccagttaaaatgatttttatcaaaaaga---taaataacagatgctggtgaggattcagagaaaagtgaatgtttgtacactattgctgggattgtaaattagtacagtcactatggaaaacagtatagaaaactaaaaactaaactctaaaaactaaaaatagaactaccatgtaatgcacataatccctctgctgggtatttatccaaaagaaaggaaattgatgtatcaaagagatacctgcacttttgtgtttattgaagtacaattcacaatggtcaagatatgaaatcaacctaaatagctatcaatggatgaacagataaagaaaatgtcttacatatacacaatggaatattattcagccacaaaaagaatgaaatcctgtcatttt------------------------------cagcaacatggatggaattggaggccattaatgttaagtgaagttagccaggtgcaaagacaaatactgcttgttctaactcacatgcagtgagagcaaataagtggttctcatggtggtaaagagttgattggtggttaccagtgtctgggaaggataagtgggttggagagaaaaaacagaggattggttaatgggtatgaaaatggagttcaatagaaggaataagatctagtgttctatagcacagtggggcaactatagttaacaataatttgttgtatagttcaaacttgctgaagaaaagaaattagaatgttcctaatgtaaagaaggggtgaaattttggggtgatgaatgtctccattgccctggctcaatcattacacattgtaggtgtgtatcaagataccacatatatccccaaaatatgtacaactattatgtatcactaaaa------tgtgtgtgtgtgtgtgtgtgtgtgtccaagagaaacctaagtatagatcaccactaattttaatgtggcatcctgaatgagatccaaggacattaggtaaaaactaaggaaatctgaataaagtatgaattggttaacaataatgtatc-atagtggtccattaagcgtaagaaatgcatcatactattctaaaatattaataacaggagaaagtgggtagagggcttaatgggaactctctatactacctttgaaattttttcctataagcctaaaactgttccaacaataaaattcattAAAATTTTTAAAATG--AAAAAAATA-----AATTAACATGTACAGATAACATTGTAAAAgaaaatcaatcaatgggatatatcaattagtagaataaagggcaaaaactgcattaacatctcaataaatgcccaaaaagcatttgtcaaaatctaccacgctttcataac--aaaaaaatcaataaacaaggaattgatggaaattttctcaatctgacaaagggcatctacaaaaacctcagttaacataatatgtagtggtgaaagactgaatgctttcccttgagatcagaagcaagcctagatatctacccttgctacttctgctcagcattgtactggaggttctaggcagggcaattaggcaagaaaaagaaatt-aaagcatccaaatggaagtagaaaaaaattaaactatctctatttgtagattagataatttttatatagaaaaccctaaggagtctatcaaacatcgttgactctaacaagtgagttcagcaaagttgaaggaatacaagatcaatacacaactatcaagtgtattt i chlSab2.chr20 I 1 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64649170 16179 + 155834243 I a score=1558162.000000 s hg38.chr1_KI270760v1_alt 87315 677 + 109528 ctatatgctagcaatgaacaatctgaaatgaaattagaaaacaattctatttgcagtagcatcaaacagaataaaatacttaagaataaatttaacaaaagcagtgcaaaatctatactctgaaacctacaaaacattttgaaataaattgaggaaaatctaaataaagggaaagtttatggatcagaagacttaatattgttaagatggcaatatactgcaagttgatttacagattcagtggaatccttatcacaatccagctgcga-ttttttgcagaaattgacaagcttattctaaaattcataaggaaactcaaaagatccagaatacccaaaacaatgtcaaaaaaagaagaccaaagttgaaagactcatactacaaagctacagaaatcaaaatactgtggttatttgcacaaggataa--agatagatcaatggaatagaattgacagtcaaaatataaaccattacccttatgtccagtgaattttcaacaaggatgccaagacaatacaatgagacacagaatactcttttcaacaaatagtgctggaacaattaggtatccatacacaaaagaatgaagttgtacccctatttcacaccatacacaa------------aaaaatactcaaaatatatcataggcctccatgtaaaagtt-aaagctataaaactcttat s panTro4.chr1 30523839 675 + 228333871 ctatatgctagcaatgaacaatctgaaatgaaattagaaaacaattctatttgcagtagcatcaaacagaataaaatacttaagaataaatttaacaaaagcagtgcaaaatctatactctgaaacctacaaaacattttgaaataaattgaggaaaatctaaataaaggggaagtttatggatcagaagacttaatattgttaagatggcaatataccgcaagttgatttacagattcagtggaatccttatcacaatccagctgcaa-ttttttgcagaaattgacaagcttattctaaaattcataaggaaactcaaaagatccagaatacccaaaacaatgtc--aaaaagaagaccaaagttgaaagattcatactacaaagctacagaaatcaaaatactgtggttatttgcacaaggataa--agatagatcaatggaatataattgacagtcaaaagataaaccattacccttatgtccagtgaattttcaacaaggatgccaagacaatacaatgagagacagaatactcttttcaacaaatagtgctggaacaattaggtatccatacacaaaagaatgaagttgtacccctatttcacaccatacacaa------------aaaaatactcaaaatatatcataggcctccatgtaaaagtt-aaagctataaaactcttat i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30113087 676 - 229942017 ctatatgctagcaatgaacaatctgaaatgaaattagaaaacaattctatttgcagtagcatcaaacagaataaaatacttaagaataaatttgacaaaagcagtgcaaaatctatactctgaaacctacaaaacattttgaaataaattgaagaaaatctaaataaagggaaagtttatggatcagaagacttaatattgttaagatggcaatataccacaagttgatttacagattcagtggaatccttatcacaacccagttgcca-ttttctgcagaaattgacaagcttattctaaaattcataaggaaactcaaaagatccagaatacccaaaacaatgtc-aaaaaagaagaccaaagttgaaagactcatactacaaagctacagaaatcaaaatagtgtggttatttgcacaaggataa--agatagatcaatggaatagaattgacagtcaaaagataaaccattacccttatgttcaatgagttttcaacaaggatgccaagacaatacaatgagagacagaatactcttttcaacaaatagtgctggaaaaattaggtatccatacacaaaagaatgaagttgtacccctattttacaccatacacaa------------aaaaatactcaaaatatatcataggcttccatgtaaaagtt-aaagctataaaactcttat i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33409450 671 + 229590362 ctatatgttagcaatgaacaatttgaaatgaaattagaaaacaattctgtttgcagtagcatcaaacagaataaaatacttaagaataaatttaacaaaagcagtgcaaaatctatactctgaaacttatgaaacattttgaaataaattgaggaaaatctaaataaagggaaagtttatggatcagaagacttaatattgttaagatggcaatataccgcaagttgatttacagattcgatggaatccttatcacaatccagctgcca-tttttggcagaaattgacaagcttattctaaaattcataagg-aactcaaaagatccagaatacccaaaacaa--tc--------aataccaaagttgaaagactcataccacaaagctacagaaatcaaaatagtgtagttattggcacaaggataa--agatagatcaatggaatagaattgacagtcaaaagataaaccattacccctatgttcaatgaattttcaacaaggatgccaagacaatacaatgagagaaagaatagtcttttcaacaaatagtgctggaaccattaggtatccatacacaaaagaatgaagttgtacccctatttcacaacatacacagaaaaa-------aaaaatactcaaaatatatcataggcttcaatgtaaaagct-aaagctataaaactcttat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29920965 671 - 227556264 ctatatgttagcaatgaacaatttgaaatgaaattagaaaacaattctgtttgcagtagcatcaaacagaataaaatacttaagaataaatttaacaaaagcagtgcaaaatctatactctgaaacttatgaaacattttgaaataaattgaggaaaatctaaataaagggaaagtttatggatcagaagacttaatattgttaagatggcaatataccgcaagttgatttacagattcgatggaatccttatcacaatccagctgcca-tttttggcagaaattgacaagcttattctaaaattcataagg-aactcaaaagatccagaatacccaaaacaa--tc--------aataccaaagttgaaagactcataccacaaagctacagaaatcaaaatagtgtagttattggcacaaggataa--agatagatcaatggaatagaattgacagtcaaaagataaaccattacccctatgttcaatgaattttcaacaaggatgccaagacaatacaatgagagaaagaatagtcttttcaacaaatagtgctggaaccattaggtatccatacacaaaagaatgaagttgtacccctatttcacaacatacacagaaaaa-------aaaaatactcaaaatatatcataggcttcaatgtaaaagct-aaagctataaaactcttat i macFas5.chr1 C 0 I 329 s papAnu2.chr1 32684490 670 + 220367699 CTATATGttagcaatgaacaatttgaaatgaaattagaaaacaattctGTTTGCAGTAGcatcaaacagaataaaatacttaagaataaatttaacaaaagcagTGCAAAATCTATACTCTGAAACTtatgaaacattttgaaataaattgagGAAAATCTAAATAAAGGGAAAGTTTAT-gatcagaagacttaatattgttaagatggcaatataCCGCAAGTTGATTTACAGATTCGATGGAATCCTTATCACAATCCAGCTGCCA-TTTTtggcagaaattgacaagcttattctaaaattcataagg-aactCAAAAGATCCAGAATACCCAAAACAA--TC--------AATACCAAAGTTGAAAGACtcataccacaaggctacagaaaTCAAAATAGTGTAGTTATTGGCACAAGGATAa--agatagatcaatggaatagaactgaCAATCAAAAGATAAACCATTACCCCTATGTTCAATGAattttcaacaaggatgccaagacaaTACAAtgagagaaagaatagtcttttcaacaaatagtgctggaaccATTAGGTATCCatacacaaaagaatgaagttgtacCCCTATTTCACaccatacacagaaaaa-------aaaaatactcaaaatatatCATAGGCTTCAACGTAAaagct-aaagctataaaactcttaT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28200869 666 - 130588469 ctatatgttagcaatgaacaatttgaaatgaaattagaaaacaattctgtttgcagtagcatcaaacagaataaaatacttaagaataaatttaacaaaagcagtgcaaaatctatattctgaaacctatggaacattttgaaataaattgaggaaaatctaaataaagggaaagtttatggatcagaagacttaatattgttaagatggcaatatactgcaagttgatttacagattcaatggaatccttatcacaatccagctgcca-tttttggcagaaattgacaagcttattctaaaattcataagg-aactcaaaagatccagaatacccaaaacaa--tc--------aataccaaagttgaaagactcataccacaaagctacagaaatcaaaatagtgtagttattggcacaaggataa--agatagatcaatggaatagaattgacagtcaaaagataaaccattacccttatgttcaatgaattttcaacaaggatgccaagacaatacaatgagagaaagaatagtcttttcaacaaatagtgctggaaccattaggtatccatacacaaaagaatgaagttgtacccctatttcacaccacacacag------------aaaaatactcaaaatatatcataggcttcaatgtaaaagct-aaagctataaaactcttat i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64665349 690 + 155834243 ctatacactagcaatgaacaatctgaaatgaaattag-aaacaattccattttcaatagcatcaaacagaataaaatacttaagaataaatttttaaaaagcagtgcaaaatctatactctgaaacctacaaaacattttgaaataaattgaggaagatctaaataaagaaaaagtttatcaatcagaagccttaatattgctaagatggcaatataccatacgttgatccacagattcaatagaatcc-tatcacaatccagctgccatttttttacagaaattgacaagcttatcctaaaattcacaaggaaatgcaaaatatccagattacctaaaacaatctc-aaaaaagaagactgaagttgaaagactcatactacagaggtacagaaatcacaataatgtggttattggcacaaggataatgatatagatcagtggaacagaactgacagtcagaagacaaaccattacctttatgttcaataaattttcaacaaggatgccaagacaatacgatgaaagaaataatagtcttttcatcaaatggtgctggaacaattaggtatccatacacaaaagaatgaagttgtacccctatttcacaccatacacacacacacacacgcaaaaatacccaaaatagatcataggcttccatgtaaaagttaaaagttataaaactcttat i calJac3.chr7 I 16179 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=7042.000000 s hg38.chr1_KI270760v1_alt 87992 3 + 109528 aag s panTro4.chr1 30524514 3 + 228333871 gag i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30113763 3 - 229942017 aag i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33410121 3 + 229590362 aag i rheMac3.chr1 C 0 I 330 s macFas5.chr1 29921965 3 - 227556264 aag i macFas5.chr1 I 329 I 1 s papAnu2.chr1 32685160 3 + 220367699 AAG i papAnu2.chr1 C 0 I 1 s chlSab2.chr20 28201535 3 - 130588469 aag i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64666039 3 + 155834243 aag i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=422.000000 s hg38.chr1_KI270760v1_alt 87995 1 + 109528 t s panTro4.chr1 30524517 1 + 228333871 t i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30113766 1 - 229942017 t i ponAbe2.chr1 C 0 C 0 s chlSab2.chr20 28201538 1 - 130588469 c i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64666042 1 + 155834243 t i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e rheMac3.chr1 33410124 330 + 229590362 I e papAnu2.chr1 32685163 1 + 220367699 I e macFas5.chr1 29921968 1 - 227556264 I a score=1450854.000000 s hg38.chr1_KI270760v1_alt 87996 642 + 109528 aaacataggcataaatcatcatgaccctggattaggcagtag-tttttagatatgaccctaaagcacagcaaaaaaagaaaaagtagataaattgggattcatcaaaattaagaacatttgtgcctcaaaggacatcatcaagaaagtgaaaatacaacccacagaataggataaaatttgtgcaaatcatatatctgataggtaactgaaat-aaatatagaatatataaagaaatctcacaactcaacaataagtagacaagccacccaatctataaaagggcaaaggatatgaataggcatttctccaaagaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattactcattaaagctatgcaaatcaaaaccacagtgagatactacttcatccctactaggatggctat-agcaaaaagctagacagcaacagtagttggtgaggatgtggagaaattgaaactctcatacactgttggccagaatacaaaacggtgcagccactgtggaaaacagtttagca-gttcctcaaaaagttaagcatagagttaccacatgacccaacagctcactcctcagtgtatgcccaggagaaatggaaacTTCCCTTCCATTCAGGAGCCGC s panTro4.chr1 30524518 642 + 228333871 aaacataggcataaatcatcatgaccctggattaggcagtag-tttttagatatgaccctaaagcatagcgaaaaaagaaaaagtagataaattgggcttcatcaaaattaagaacatttgtgcctcaaaggacatcatcaagaaagtgaaaatacaacccatagaataggataaaatttgtgcaaatcatatatctgataggtaactgaaat-aaatatagaatatataaagaaatctcacaactcaacaataagtagacaagccacccaatctataaaagggcaaaggatatgaataggcatttctccaaagaaaatacacaaatggccaataagcacatgaaaagatgctcaacatcattactcattaaagctatgcaaatcaaaaccacagtgagatattacttcatccctactaggatggctat-agcaaaaagctagacagcaacagtcgttggtgaggatgtggagaaattgaaactctcatacactgttggccagaatacaaaacggtgcagccactgtggaaaacagtttagca-gttcctcaaaaagttaagcatagagttaccacatgacccaacagctcactcctcagtgtatgcccaggagaaatggaaacTTCCCATCCATTCAGGAGCCCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30113767 642 - 229942017 aaacataggcataaatcatcatgaccctggattaggcagtaa-tttttagatacgaccctaaagcatagcgaaaaaagaaaaagtagataaattgggcctcatcaaaattaagaacatttgtgcctcaaaggacatcattaagaaagtgaaaatacaacccacagaataggataaaatttgtgcaaatcatgtatctgataggtaacttaaat-aaatatagaatatataaagaaatctcacaactcaacaataagtagacaagccacccaatatataaaagggcaaaggatatgaataggcatttctccaaaaaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattagtcattaaagcaatgcaaatcaaaaccacagtgagatactacttcatccctactaggatggctat-agcgaaaagctagacagcaacaatagttggtgaggatgtggagaaattgaaactctcatacactgttggccagaatacaaaacggtgcagccactgtggaaaacagtttagca-gttcctcaaaaagttaagcatagagttaccacatgacccaacagctcactcctcagtgtatgcccgggagaaatggaaacTTCCCTTCCATTCAGGAGCCCC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33410454 637 + 229590362 aaacgtaggcacaaatcatcatgaccctggattaggcagtag-cttttagatatgaccctaaagcatagtgaaaaaagaaaaagtagataaattgtacttc-tcaaaattaacaacatttgtgcctcaaaggacatcatcaaaaaattgaaaatacagcccacagaataggataaaatttgtgcagatcatata-ctgataggtaact----t-aaatatagaatatatgaacaaatcttacaactcaacaataaatagacaagccacccaatctataaaagggcaaagcatatgaataggcattactccaaagaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattagtcattaaagcaatgcaaatcaaaaccacagtgagatacgacttcatccctagtaggatggccataagcagaaaggtagacagcaacaactgttggtgaggatgtgga-aaattgaaactctcatacactgttggccagaatacaaaaccatgcagccactgtggaaaacagtttagcattttcttcaaaaagttaagcatagagttaccacatgacctaacaactcactcctcagtatatgcccaggagaaatggaaacTTCCCTTCCATTCAGGAGCCCT i rheMac3.chr1 I 330 C 0 s macFas5.chr1 29921969 637 - 227556264 aaacgtaggcacaaatcatcatgaccctggattaggcagtag-tttttagatatgaccctaaagcatagtgaaaaaagaaaaagtagataaattgtacttc-tcaaaattaacaacatttgtgcctcaaaggacatcatcaaaaaattgaaaatacaacccacagaataggataaaatttgtgcagatcatata-ctgataggtaact----t-aaatatagaatatatgaacaaatcttacaactcaacaataaatagacaagccacccaatctataaaagggcaaaggatatgaataggcatttctccaaagaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattagtcattaaagcaatgcaaatcaaaaccacagtgagatacgacttcatccctagtaggatggccataagcagaaaggtagacagcaacaactgttggtgaggatgtgga-aaattgaaactctcatacactgttggccagaatacaaaaccatgcagccactgtggaaaacagtttagcattttcttcaaaaagttaagcatagagttaccacatgacctaacaactcactcctcagtatatgcccaggagaaatggaaacTTCCCTTCCATTCAGGAGCCCT i macFas5.chr1 I 1 C 0 s papAnu2.chr1 32685164 636 + 220367699 AAACGTAGGCACAAATCATCATGACCCTGGATTAGGCAGTAG-TTTTTAGATATGACCCTAAAgcatagtgaaaaaagaaaaagtagataaattgtACTTC-TcaaaattaagaacatttgtgcCTCAAAGGACAtcatcaaaaaattgaaaatacaacccacagaataggataAAATTTGTGCAGATCATATA-CTGATAGGTAAct----t-aaatatagaatatatgaacaaatcttacaactcaacaataaataGACAAGCCACCCAATCTATAaaagggcaaaggatatgaataggcatttctccaaagaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattagtcattaaagcaatgcaaatcaaaaccacagtgagatacgaCTTCATCCCTAGTAGGATGGCCATAAGCAGAAAGGTAGACAGCAACaactgttggtgaggatgtgga-aaatcgaaactctcatacactgttggccAGAATACAAAACGGTGcatccactgtggaaaacagtttagca-tttcttcaaaaagttaagcatagagttaccacatgacccaaCAACTCACTCCTCAGTATATGCCCAGGAGAAATGGAAACTTCCCTTCCATTCAGGAGCCCC i papAnu2.chr1 I 1 C 0 s chlSab2.chr20 28201539 638 - 130588469 aaacataggcacaaatcatcatgaccctggattaggcagtag-tttttagatatgaccctaaagcatagcaaaaaaagaaaaagtagataaattgtacttcatcaaaattaagaacatttgtgcctcaaaggacatcatcaaaaaagtgaaaatacaacccacagaataagataaaatttgtgcagatcatata-ctgataggtaact----t-aaatatagaatatataaacaaatcttacaactcaacaataaatagacaagccacccaatctataaaagggcaaaggatatgaataggcatttctccaaagaatatacacaaatggccaataagcacatgaaaagatgctcaacatcattagtcattaaagcaatgcaaatcaaaaccacagtgagatactacttcatccctagtaggatggccataagcagaaaggtagacagcaacaactgttggtgaggatgtgga-aaattgaaactctcatacactgttggccagaatacaaaactgtgcagccactgtggaaaacagtttagcattttcttcaaaaagttaagcatagagttaccacatgacctaacaactcactcctcagtatatgcccaggagaaatggaaacTTCCCTTCCATTCAGGAGCCCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64666043 617 + 155834243 aaacataggcataaattatcatgaccttgggttaggcaatcgttttttagatgtcacactaaagcatagcaaaaaatgaaaaagtagataaattgagcttcatcaaaattaagaacatgtgtggctcaaagaacatcatcaaaaaagtgaaaatacaacccacagaatgggataaaatttgtgcaaatcatatatctgataagtaact----taaaatatagaatctacaaagaaatcttgtaactcaacaacaaaaagacaagccacccaatctaaaaataggcaaaggatttgaataggcatttctccaaataatat----aaatggctaataagcacatgaaaaaatgctccacatcattagtcattaaagcaatgcaaatc-------------------acttcatccctacaaggatgactattagcaaaaagatagacagcaacaatttttggtgaggatgtggagaaattaaaactctcatacactgttcaccagaatac-aaatggtgcgaccactgtggaagacagtttagca-gttcctcaaaaagttaaacatagagttaccacatgacccaacaactcactcctcaggataagcccaggaaaatcagaaacTTCCCTTCCATTCAGGAGCCCC i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 560173 600 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=1146904.000000 s hg38.chr1_KI270760v1_alt 88638 475 + 109528 AGTCCACAGGACAAGCT-GGGCTGGAG---GGAGAGGAGAGCTGGAAGAACAAGAATGGGACAATTATTCCTGTGTGGGTCTCA-AGGTGCCACGAAAAGGATTTTTCATGACTTTCG-GACTTT----------------------AATACCCT--------GAGAGGCCTCTTATGG------------------TTTCtgt-gtgt-------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTGCTTCCTTGTGCGTGTGAGTCACTAATTATGTACAAAATA---AGCCGTGACATGTGATGATACAGCCCTCATATAAAAG----TATCTTCTCATAGCTCAGTAACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCATTTTTTTCCAATTAAAAAATAAAAAATTATTAAAAACACCTCTGA---GTCCCCTGTCTTCCCATAGTCCT------TTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTTT---------GGGGTGAGAGGA-CCTGTCTCGGTGGAG s panTro4.chr1 30525160 462 + 228333871 AGTCCACAGGACAAGCT-GGGCTGGAG---GGAGAGGAGAGCTGGAAGAACAAGAATGGGACAATTATTCCTGTGTGGGTCTCA-GGGTGCCACAAAAAGGATTTTTCATGAATTTCA-GACTTT----------------------AATACCCT--------GAGGGGCCTCTTAGGG------------------TTTCTTT-GTGC----------------------------CgtgtgtgtgtgtgtgtgtgtgtCTGCTTCCTTGTGCGTGTGAGTCAC----TATGTACAAAATA---AGCCGTGACATGTGATGATACAGTCCTCATATAAAAG----TATCATCTCATAGCTCAGTAACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCATTTTATTCCaattaaaaaataaaaaattatttaaaaCACCTCTGA---GTCCCCTGTCTTCCCATAGTCCTTTAGCCTTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTTT---------GGGGTGAGAGGA-CCTGTCTCGGTGGAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30114409 468 - 229942017 AGTCCACAGGACAAGCT-GGGCTGGAG---GGAGAGGAGAGCTGGAAGAACAAGAATGGGACAGTTATTCCTGTGTGGGTCTCA-GGGTGCCACGAAAAGGATTTTTCATGAGTTTCG-GACTTT----------------------AATACCCT--------GAGGGGCCTCTTAGGG------------------TTTCTTT-GTGC----------------------CgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTGCTTCCTTGTGCATGTGAGTCAC----TATGTACAAAATA---AGCCATGACATGTGATGATACAGCCCTCATATAAAAG----TATCATCTCATAGCTCAGTCACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCATTTTATTCCaattaaaaaataaaaaattattaaaaaCACCTCTGA---GTCCCCTGTCTTCCCATAGTCCTTTAGCCTTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTCT---------GGAGTGAGAGGA-CCTGTCTCGGTGGAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 560773 519 - 28733288 AATCCTCAGGGCAAGGTAGGGCTGGAGAGTAGAGAGAGGACCTAGAGGAACAAGATTAGGACAATTA-TCATGTGTAGCATTCGCAGGTCCTAGGAAAAATA-TTTTCTTGAGTTTGGAGACTTTCTCTGCTTCCTAAGAACCATTCAGTGTTCTTGAAGTGAAAATGGTCCCTTAGGAAAATAGTCTCCAGGACCTCCTCTTt-gtgt-------------------------gtgtgggtgtgtatctgtatgtgtagttgcttctgtatgcatgtgtgCAGCTGACTATGCATGTAATA---GACTCTG-TGTGTGATGATGCATAGCTCATATTAAAACAACTGGCATCTCATAATTCAATTCCTCAGGAGGAAAAATCTAGGACAAATATTTAGCTGGTATTTTATCCCAATTCAAATATG------TGT-----ACATC-CTGAGTTGTCTCATCTCCACCCACAGCCCTGTAGTCACAACCAC--CCAGGTAGCATCTGCTAAGAAGAGAAAGCTC---CAGTCTCCAAGTGCAGGGGTGGGGGTG-CCTATCTTGGTGGGG i nomLeu3.chr24 I 600 I 463 s rheMac3.chr1 33411091 494 + 229590362 AGTCCGCAGGACAAGTT-CAACTGGAG---GGAGAGGAGAGCTGGAAGAACAAGAATGGGACAGTTATTCCTGTGTGGGTCTCA-GGGTGCCAGGAAAAGGATTTTTCATGAGTTTTG-GACTTT----------------------AATACCCT--------GAAGGGCCTCTTAGGG------------------TTTCTTt-gtgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTGCTTCCTTGTGCATGTGAGTAGCTAACTATGTACAAAACA---AGCTGTGGCATGTGATGATACAGCCCTCATATTAAAG----TATCATCTCATAGCTCAGTAACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCATTTTATCCCAATTACaaaataaaaaattattaaaaaCAACTCTGA---ATCCCCTGTCTTCCCATAGTCCTGTAGCCTTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTTT---------GGGGTGGGAGGA-CCTGTCTTGGTGGAG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29922606 488 - 227556264 AGTCCGCAGGACAAGTT-CAACTGGAG---GGAGAGGAGAGCTGGAAGAACAAGAATGGGACAGTTATTCCTGTGTGGGTCTCA-GGGTGCCAGGAAAAGGATTTTTCATGAGTTTTG-GACTTT----------------------AATACCCT--------GAAGGGCCTCTTAGGG------------------TTTCTTt-gtgc------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTGCTTCCTTGTGCATGTGAGTAGCTAACTATGTACAAAACA---AGCTGTGGCATGTGATGATACAGCCCTCATATTAAAG----TATCATCTCATAGCTCAGTAACTTAGGAGGTAAAGTCTAAAACAAATATTCAGCAGGCATTTTATCCCAATCACAAAATAAAAAATTATTAAAAACAACTCTGA---ATCCCCTGTCTTCCCATAGTCCTGTAGCCTTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTTT---------GGGGTGGGAGGA-CCTGTCTTGGTGGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32685800 464 + 220367699 AGTCCACAGGACAAGTT-CAactggag---ggagaggagagctGGAAGAACAAGAATGGGAGAGTTATTCCTGTGTGGGTCTCA-GGGTGCCAGGAAAAGAATTTTTCATGAGTTTTG-GACTTT----------------------AATACCCT--------GAAGGGCCTCTTAGGG------------------CTtcttt-gtgc------------------------------tgtgtgtgtgtgtgtgtgtgtctgcttccTTGTGCATGTGAGTAGCTAACTATGTACGAAACA---AGCTGTGGCATATGATGATACAGCCCTCATATTAAAG----TATCATCTCATAGCTCAGTAACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCATTTTATcccaattacaaaataaaaaattattaaaaacaactcTGA---GTCCCCCATCTTCCCGTAGTCCTGTAGCCTTAGCTACTTCAAGGAGGAGTAAGCTAAGAGGGGCAAGCTCTGGCAGTTT---------GGGGTGAGAGGA-CCTGTCTTGGTGGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28202177 481 - 130588469 AGTCCACAGGACAAGTT-CGACTGGAG---GCAGAGGAGAGCTAGAAGAACAAGAATGGGACAGTTATTCCTGTGTGGGTCTCA-GGGTGCCAGGAAAAGGATTTTTCATGAGTTTTG-GACTTT----------------------AATACCCT--------GAAGGGCCTCTTAGGG------------------TTTCTTt-gtgc----------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtCTGCTTCCTTGTGCATGTGAGTAGCTAACTATGTACAAAACAAGCAGCTGTGGCATGTGATGATACAGCCCTCATATTAAAG----TATCATCTCATAGCTCAGTAACTTAGGAGGCAAAGTCTAAAACAAATATTCAGCAGGCACTTTATCCCAATTACAAAATAAAAAAATATTAAAAACAACTCTGA---GTCCCCTGTCCTCCCATAGTCCTCTAGCCTTAGCTACTTCAAGGAGGAGTAAGCAAAGAGAGGCAAGCTCTGGCAGTTT---------GCGGTGGGAGGA-CCTGTCTTGGTGGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64666660 466 + 155834243 AGTCCACAGAAAAAGTT-GGGCTGGAG---GTAGAGGAGAGTTGGAAGAACAAAAATGGGATGATTATTCCTGTGTGGGTCTCA-GGGCACCAGGAAAAGGATTTTTCATGAGTTTAG-GACTTT----------------------AATACTCC--------AAAGGGCCTCTTAGGG------------------TTTCtgtggtgt---------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTACTTCCTTGTGCATGTGAATTGCTAACTATATACATAATA---AGCCATGGCATGTGATGATACAGCCCTCATATAAAAC----TACCATCTCATAGCTCAGTAGTTCAGGAGGCAAAGTCTGAAACAAATATTCAGTTGGCATTTTATCCCAATTAAAAAAT-------TATTAAAAACATCTCTGA---GTTTCCTGTCTTCCCACAGTCCTATAGCCTTAGCTACT--------------GCAAAGAGGGGTAAGCTCTGGCAGTTT---------GGGGTGAGAGAACCCTGTCCTGGTGGAG i calJac3.chr7 C 0 C 0 e canFam3.chr2 15017775 104 - 85426708 I a score=105298.000000 s hg38.chr1_KI270760v1_alt 89113 50 + 109528 AAATGACAGTCATTTGCTCACGGCTTTtgatatggttt-agctgtttcccc s panTro4.chr1 30525622 50 + 228333871 AAATGACAGTCATTTGCTCATGGCTTTTTatatggttt-agctgtgtcccc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30114877 50 - 229942017 AAATGACAGTCATTTGCTCATGGTTTTtgatatggttt-agctgtgtcccc i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33411585 50 + 229590362 AAATGTCAGTCATTTGCTTATGGCCCTtgacgtggttt-ggctgtgtcccc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29923094 50 - 227556264 AAATGTCAGTCATTTGCTTATGGCCCTtgacgtggttt-ggctgtgtcccc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32686264 50 + 220367699 AAATGACAGTCATTTGCTTATGGCccttgacatggttt-ggctgtgtcccc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28202658 50 - 130588469 AAATGTCAGTCATTTGCTTATGGCCCTtggcatggttt-ggctgtgtcccc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64667126 51 + 155834243 ATATGATAGTCATTTGATCATAGCTCTTGACATGGTTTGGGCTGTGTCCCC i calJac3.chr7 C 0 I 2326 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=756948.000000 s hg38.chr1_KI270760v1_alt 89163 417 + 109528 actgaaatctcaacttgaattatatttcccagaattctcttgtgttgtgggagggaccaatggggaggtagttgaatcatgggggccagtcttttccatgctattctcataatagtgaataaatctcacgagatctgatgggtttatcagggatttccacttttgcttcttcctcattttctcttgccaccaccatgtaagaagtgctttttgccttccaccatgattctgaggcctctccagccctgtggaactgtgagtccaattaaacctttttttcttcccagtctccagtatgtctttatcagaagtgtg-aaaacagacaaatacagtaaattggtaccagtagagtgcagcgttgctgaagacatattcaaaaatatggaagcgactttggaactgggtaacaggcagagg s panTro4.chr1 30525672 416 + 228333871 actgaaatctcaacttgaattatatttcccagaattctcttgtgttgtgggagggaccaatggggaggtagttgaatcatgggggccagtcttttccatgctattctcataatagtgaataaatctcatgagatctgatgggtttatcaggggtttccacttttgcttcttcctcattttctctt-ccaccaccatgtaagaagtgctttttgccttccaccatgattctgaggcctccccagccctgtggaactgtaagtccaattaaacctttttttcttcccagtctccagtatgtctttatcagaagtgtg-aaaacagactaatacagtaaattggtaccagtagagtgcagcgttgctgaagacatattcaaaaatatggaagcgactttggaactgggtaacaggcagagg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30114927 417 - 229942017 actgaaatctcaacttgaattatatttcccagaattctcacgtgttgtgggagggacccatggggaggtaggtgaatcatgggggccagtcttttccatgctattctcataatagtgaataaatctcacgagatctgatgggtttatcaggggtttccacttttgcttcttcctcattttctctcaccaccaccatgtaagaagtgctttttgccttccaccatgattctgaggcctccccagccatgtggaactgtaagtccaattaaacctctttttcttcccagtctcgggtatgtctttatcagaagcgtg-aaaacagactaatacagtaaattggtaccagtagagtgcagcgttgctgaagacatattcaaaaatatggaagcaactttggaactgggtaacaggcagagg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33411635 418 + 229590362 actgaaatctcaacttgaattatatttcccacaattctcacgtgttgtgggagggatccaaggggaggtagctgaatcatgggggctcgtcttttccatgctattctcataatagtgaataaatctcatgagatctgatgggtttatcaggggtttccacttttgcctctttctcattttctcttgccaccaccatgtgagaagtgctttttgccttccacggtgattctgaggcctccccagccatgtggaactgtaagtccaattaaacctctttttcttcccagtctctggtatgtctttatcagcagtgtgaaaaaaagactaatacagtaaattggtgccagtggagtgcagcgttgctgaagacatattcaaaaatgtggaagcaactttggaactgggtaacaggcagagg i rheMac3.chr1 C 0 I 1631 s macFas5.chr1 29923144 418 - 227556264 actgaaatctcaacttgaattatatttcccacaattctcacgtgttgtgggagggatccaaggggaggtagctgaatcatgggggctcgtcttttccatgctattctcataatagtgaataaatctcatgagatctgatgggtttatcaggggtttccacttttgcctctttctcattttctcttgccaccaccatgtgagaagtgctttttgccttccacggtgattctgaggcctccccagccatgtggaactgtaagtccaattaaacctctttttcttcccagtctctggtatgtctttatcagcagtgtgaaaaaaagactaatacagtaaattggtgccagtggagtgcagcgttgctgaagacatattcaaaaatgtggaagcaactttggaactgggtaacaggcagagg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32686314 417 + 220367699 actgaaatctcaacttgaattatatttcccacaattctcacatgttgtgggagggatccatggggaggtagttgaatcatgggggcccatcttttccatgctattctcataatagtgaataagtctcacgagatctgatgggtttatcaggggtttccacttttgcttcttcctcattttctcttgccaccaccatgtgaGAAGTGctttttgccttccaccgtgattctgaggcctccccagccatgtggaactgtaagtccaattaaacctctttttcttcccggtctctggtatgtctttatcagcagcgtg-aaaaaagactaatacagtaaattggtgccaGTGGAGTGCAGCGTTGCTGAAGACATattcaaaaatgtggaagcaactttggaactgggtaacaggcagagg i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28202708 410 - 130588469 actgaaatctcaacttgaattatatttcccacaattctcacgtgttgtgggagggatccaaggggaggtagttgaatcatgggggctggtcttttccatgctattctcataatagtgaataaatctcatgagatctgatgggtttatcaggggtttccacttttgcctcttcctcattttctcttgccaccaccatgtaagaagtgctttttgccttccactgtgattctgaggcctccccagccatgtggaactgtaagtccaattaaacctctttttcttcccagtctctggtgtgtctttatcagcagcgtgaaaaAAAGAC--------taaactggtgccagtggagtgcagcgttgctgaagacatattcaaaaatgtggaagcaactttggaactgggtaacaggcagagg i chlSab2.chr20 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64667177 2326 + 155834243 I a score=738421.000000 s hg38.chr1_KI270760v1_alt 89580 544 + 109528 ttggaagagttggaagggttcagaagaagacaggaaaatatgggaaagtttggaacttcctagagacttgtcaaatgtcttttcccaaaatgctgatagtgatatggacaataaaattcaggctgaagtggtctcagaaggagatgaaaaagttgttgggaactgaagcaaaggtgactcttgttatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaaccagacagagatgatttagggtatctgacagaagaaatttctaagcagcaaagtattcaagaggtaacttaggtgctgttaaaggcattcagtcttataagggaagcagagcaaaaaagtttggaatatttgtagcctgactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaattagtataagtagcaaggagcctaatgttaatcccccaagaccatggggaaaatgtctccaggccatgtcagagaacttcccagcagcccctcccatc s panTro4.chr1 30526088 544 + 228333871 ttggaacagtttgaagggttcagaagaagacaggaaaatatgggaaagtttggaacttcctggagacttgtcaaatgtcttttcccaaaatgctgatagtgatatggacaataaaattcaggctgaggtggtctcagatggagatgaaaaagttgttgggaactgaagcaaaggtgactcttgttatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaaccagacagagatgatttagggtatctgacagaagaaatttctaagcagcaaagtattcaagaggtaacttaggtgctgttaaaggcattcagtcttataagggaagcagagcaaaaaagtttggaatatttgcagcctgactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaatttgcataagtagcaaggagcctaatgttaatcccccaagaccatggggaaaatgtctccaggccatgtcagagaacttcttagcagcccctcctatc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30115344 544 - 229942017 ttggaacagtttgaagggctcagaagaagacaggaaaatatgggaaagtttggaatttcctagagacttgtcaaatgtcttttcccaaaatgctgatagtgatatggacaataaaattcaggctgagatggtctcagttggagatgaaaaagtagttgggaactgaagcaaaggtgactcttgttatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaacttgacagagatgatttagggtatctggcagaagaaatttctaagcagcaaagtattcaagaggtaacttaggtgctgttaaaggcattcagtcttataagggaagcagagcaaaaaagtttggaatacttgcagcctgactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaatttgcataagtagcaaggagcctaatgttaatcccccaagaccatggggagaatgtctccaggccatgtcagagaacttctcagcagcccctcccatc i ponAbe2.chr1 C 0 I 1452 s macFas5.chr1 29923562 544 - 227556264 ttggaacagtttgacgggctcagaagaagacaggaaaatatgggaaagtttggaacttcctagagacttgtcaaatggcttttcccaaaatgctgatactgatatggacaataaagttcaggctgaggtggtctcagatggagatgaaaaagttgttgggaactgaaacaaaggtgactcttattatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaacttgacagagatgatttagggtatctggcagaagaaatttctaagcagcaaagtgttcaagaggtaacttaggtgctgttaaaggcattcagtcttataaggaaagcagagcaaaaaagtttggaatatttgcagcctaactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaatttgcataagtagtaaggagcctaatgttaatcccccaagaccatggggaaaatgtctccaggccatgtcagagaacttcccagcagcccctcccatc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32686731 544 + 220367699 ttggaacagtttgacgggctcagaagaagacaggaaaatatgggaaagtttggaacttcctagagacttgtcaAATGGcttttcccaaaatgctgatagtgatatggacaataaagttcaggctgaggtggtctcagatagagatgaaaaagttgttgggaactgaagcaaaggtgactcttactatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaacttgacagagatgatttagggtatctggcagaagaaatttctaagcagcaaagtgttcaagaggtaacttaggtgctgttaaaggcattgaGTCTTATAAGGAAAGCAGAGCAAAaaagtttggaatatttgcagcctgactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaatttgcataagtagtaaggagcctaatgttaatcccccaagaccatggggaaaatgtctccaggccatgtcagagaacttcccagcagcccctcccatc i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28203118 544 - 130588469 ttggaacagtttgaagggctcagaagaagacaggaaaatatgggaaagtttggaacttcctagagacttgtcaaatggcttttcccaaaatgctgatagtgatatggacaataaagttcaggctgaggtggtctcagatggagatgaaaaagttgttgggaactgaagcaaaggtgactcttattatgttttaacaaagagactggctgcattttgcccctgccctagagatttgtggaactttgaacttgacagagatgatttagggtatctggcagaagaaatttctaagcagcaaagtgttcaagaggtaacttaggtgctgttaaaggcattcagtcttataaggaaagcagagcaaaaaagtttggaatatttgcagcctgactatgagatagaaaagaaaattccattttctggggagaaattcaagccagctgcagaaatttgcataagtagtaaggagcctaatgttaatcccccaagaccatggggaaaatacctccagaccatgtcagagaacttcccagcagcccctcccatc i chlSab2.chr20 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64667177 2326 + 155834243 I e rheMac3.chr1 33412053 1631 + 229590362 I a score=1007997.000000 s hg38.chr1_KI270760v1_alt 90124 1158 + 109528 acaggcttggaggcccaggaggaaaaagtgttttcgtgggccaggtgcagagtccccgagctgtgtgtaacctaggaacttggtaccatgtgtcccagtggctccagccgtggctgaaaggggccaatgtacagctcaggctatggcttcagagagtgagagccccaagccttggaagcttctatatggtgctgagcctgtggatgcatagcagccaagaattgaggtgtgggaaactccgcctagatttcagaagatacatggaaacacctcgaagcccaggcaaaattttgttacaggggtgggaccctcatgaagaacctctgctagggcagtacagaaaggaaatgtggggtcagag-cccccaaacagagtccctactggggcaccacctagtggaactgtgagaagagggccaccatcctccagaccccagaatagtagatccaccaacagcttgcaccatgcacctggaaaagccacagacactcaatgccagcctgtgaaagcagccaggagggagtaagtcacaggggtggagctgcccaagactgtgggaacccacctcttgcatcagcataacctgggtgtgaaacatggagtcaaaggagatcattttggagctttaaagtttgactgccccactaggttttggatttgcatgggccctgtaa-cccctttattttggccaatttcttccatttggaagagctgtatttacccaatacctgtacccccattgtatctaggaagtaactagcttgcttttgattttacaggctcataggtggaagggacttg-cttgtctcagatgagactttgggctgtggacttttgggttaatgctaaaatgagttaagactttgggggactgttgggaagacatgattggttttgaaatgtgaggacatgagatttggaggggccagggcaggaatgatatggtttggttgtgtctccatccaaatctcaacttgagttgtatctcccagaattcccacatgttgtaggagggacccagggggaggtaattgaatcatgggggccagtctttcctgtgctattctcgtgatagtgaataagactcacaagatcagatgagtttatcaggggtttccacttttgcttctttctcattttctcttgccaccaccatgt s panTro4.chr1 30526632 1158 + 228333871 acaggtttggaggcccaggaggaaaaagtgttttcgtgggccaggcgcaaagtccccgggctgtgtgtaacctagggacatggtgccatgtgtcccagtggctccagctgtggctgaaaggggccaacgtacagctcaggctatggcttcagagagtgagagccccaagccttggaagcttctatatggtgctgagcctgcggatgcacagaagccaagaattgaggtttgggaaactccgcctagatttcagaagatatatgcaaacacctcgatgcccaggcaaaattttgttacaggggtgggaccctcatgaagaacctctgctagggcagtacagaagggaaatgtggggtcagag-cccccacacagagtccctactggggcaccacctagtggaactgtgagaagagggccaccgtcctccagaccccagaatagtagatccgccgacagcttgcaccatgcacctggaaaagccacagacactcaacgccagcccatgaaagcagccaggagggagtaagttacaggggtggagctgcccaagaccgtgggaacccacctcttgcatcagcataacctgggtgtgagacatggagtcaaaggagatcattttggagctttaaagtttgactgctccactaggttttggatttgcatgggccctgtaa-cccctttattttggccaatttcttccatttggaagagctgtatttacccaatacctgtacccccattgtatctaggaagtaactagcttgcttttgattttacaggctcataggtggaagggacttgccttgtctcagatgagactttgggttgtggacttttgggttaatgctaaaatgaattaagactttgtgggtctgctgggaagacatgattggttttgaaatgtgaggacatgagatttggaggggccagggcaggaatgatatggttt-gttgtgtctccatccaaatctcaacttgagttgtatctcccagaattcccacacgttgtaggagggacccagggggaggtaattgaatcatgggggccagtctttcctgtgctattctcgtgatagtgaataagtctcacaagatcagatgagtttatcaggggtttccacttttgcttctttctcattttctcttgccgccaccatgt i panTro4.chr1 C 0 C 0 s macFas5.chr1 29924106 1159 - 227556264 acaggcctggaggcccaggaggaaaaactggtttcatcagccaggcccagagtccccgggctgtgtgtagcctagggacttggtgccctgtgtcccagtggctccagccgtggctgaaaggggccaatgtacagctcaggctgtgacttcagagggtgagagccccaagccttggaagcttctatatggtgctgagcctgtggatgcacagaagccaagaattgagatttgggaacctctgcctagatttcagaagatatatggaaacacctggatgcccaggcaaaagtttgtttcaagggtggggccctcatgaagaacctctgctagggcactacagaagggaaatgtggggtcagag-cccccacacagagtccctactggggcaccacctagtggaactgtgagaagagggccaccatcctccagaccccagaatagtagatccactgacagcttgcaccatgcacctagaaaagccacagacagtcaacgccagcccgtgaaagcagccaagaaggagtaagtcacaggggtggagctgcccaagaccgtgggaacccacctcttgcatcagtgtaacccggatgtgagacatggagtcaaaggagatcattttggagctttaaagtttgactgccccactgggttttggatttgtgtgggccctgtaa-ccccttttttctggccaatttcttctatttggaagagctgtatttacccaatacctgtacccccattgtatctaggaagtaactagcttgcttttgattttacaggctcataggtggaagggacttggcttgtctcagattagactttggactgtggacttttgggttaatgctgaaatgagttaagactttgggggactgttgggaaggcattattggttatgaaatgtgaggacatgagatttggaggggccagggtgggaatgatatggtttggctgtgtccctatccaaatctcaacttgagctgtatctcccagaattcccacatgttgtaggagtgacccagggggaggtaattgaatcatgggggccggtctttcctgtgcttttctcgtgatagtgaataagtctcacaagatctgatgggtttatcaagtgtttccgcttttgcttctttctcattttctcttgcctccaccattt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32687275 1160 + 220367699 acaggcctggaggcccaggaggaaaaactGGTTTCATCAGCCAGGCCCAGAGTCCCCAGGTTGTGtgtagcctagggacttggtgccctgtgtcccagtggCTCCAGCCGTGGCTGAAAGGgtccaatgtacagctcaggctgtgacttcagagggtgAGAGCCCCAAGCCTTGGAAGCTTCTATATGGTGCTGAGCCTGTGGATGCACAGAAgccaagaattgagatttgggaacctctgcctaggtttcagaagatatatggaaacacctggatgcccaggcaaaagtttgtttcaagggtggggccctcatgaagaacctctgctagggcactacagaagggaaatgtggggtcagagccccccacacagagtccctactggggcaccacctagtggaactgtgagaagagggccaccatcctccagaccccagaatagtagatccactgacagcttgcaccatgcacctagaaaagccacagacagtCAAcgccagcccgtgaaagcagccaaGAAGGAGtaagtcacaggggtggagctgcccaagaccgtgggaacccacctcttgcatcagcgtaacccggatgtgagacatggagtcaaaggagatcattttggagctttaaagtttgactgccccactgggtTTTGGATTTGtgtgggccctgtaa-cccctttttTCTGGCCAATTTCTTCTATTTGGAagagctgtatttacccaatacctgtacccccattgtatctaggaagtaactagcttgcttttgattttacaggctcataggtggaagggacttggcttgtctcagattagactttggactgtggacttttgggttaatgctgaaatgagttaagactttgggggactgttgggaaggcattattggttatgaaatgtgaggacatgagatttggaggggccagggtgggaatgatatggtttggctgtgtccctatccaaatctcaacttgagctgtatctcccagaattcccacacaTTGTAGGAgtgacccagggggaggtaattgaatcatgggggccggtctttcctgtgcttttctcgtgatagtgaataagtctcacaagatctgatgggtttatcaagtgtttccgcttttgcttctttctcattttctcttgcctccaCCATTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28203662 1160 - 130588469 acaggcctggaggcccaggaggaaaaactggtttcatcagccaggcccagagttcctgggctgcatgtagcctagggaattggtgccctgtgtcccagtggctccagccgtggctgaaaggggccaatgtacagctcaggctgtgacttcagagggtgagagctccaagccttggaaacttctatatggtgctgagcctgtggatgcacagaagccaagaattgagatttgggaacctctgcctagatttcagaagatatatggaaacacctggatgcccaggcaaaagtttgttacaggggtggggccctcatgaagaacctctgctagggcactacagaaaggaaatgtggggtcagag-cccccacacagagcccctactggggcaccacctagtggaactgtgagaagagggccaccatcctccagaccccggaatagtagatgcactgacagcttgcaccatgcacctggaaaagccacagacagtcaacaccagcccgtgaaagcagccacgagggagtaagtcacaggggtggagctgcccaagactgtgggaacccacctcttgcatcagcataacccggatgtgagacatggagtcaaaggagatcattttggagctttaaagtttgactgccccactgggttttggatttgtgtgggccctgtaacccccttttttttggccaatttcttctatttggaagagctgtatttacccaatacctgtacccccattgtatctaggaagtaactagcttacttttgattttacaggctcataggtggaagggacttgccttgtctcagattagactttggactgtggacttttgggttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttatgaaatgtgaggacatgagatttggaggggccagggtgggaatgatatggtttggctgtgtccctatccaaatctcagcttgagctgtatctcccagaattcccacatgttgtaggagtgacccaggcagaggtaattgaatcatggaggccggtctttcctgtgctattctcgtgatagtgaataagtctcacaagatctgatgggtttatcaagtgtttctgcttttgcttctttctcattttctcttgcccccaccattt i chlSab2.chr20 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64667177 2326 + 155834243 I e ponAbe2.chr1 30115888 1452 - 229942017 I e rheMac3.chr1 33412053 1631 + 229590362 I a score=3986.000000 s hg38.chr1_KI270760v1_alt 91282 15 + 109528 aagaagtgcttttcg s macFas5.chr1 29925265 15 - 227556264 aagaagtgctttttg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688435 15 + 220367699 AAGAAGtgctttttg i papAnu2.chr1 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64667177 2326 + 155834243 I e ponAbe2.chr1 30115888 1452 - 229942017 I e chlSab2.chr20 28204822 0 - 130588469 C e rheMac3.chr1 33412053 1631 + 229590362 I e panTro4.chr1 30527790 0 + 228333871 C a score=0.000000 s hg38.chr1_KI270760v1_alt 91297 5791 + 109528 cTgagaggagccaagatggccgaataggaacagctccggtctacagctcccagcatgagcgacgcagaagacgggtgatttctgcatttccatctgaggtaccgggttcatctcactagggagtctgagatcaaactgcaaggcagcagcgaggctgggggaggggtgcctgccactgcccaggcttgattaggcaaacaaagcagccgggaagctcaaactgggtggagcccaccacagctcaaggaggcctgcctgcctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagcaggggcacactgacacctcacacagcagggtactccaacagacctgcagctgagggtcctctctgttagaaggaaaactaacacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaacccacaaagatgtggaaaaaacagaacagaaaaactggaaactctaaaaagcagagcgcctctcctcctccaaaggaacacagttcctcaccagcaacggaacaaagctggatggagaatgactttgatgagctgagagaagaaggcttcagacaatcaaattactctgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagcgatggaagatgaaatgaatgaaatgaagcgagaagggaagtctagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttaccctcaaagggaagcccatcagaccaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggtcaatattcaacattcttaaaaaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccttacaagagctcctgaaggaagaactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaaggctaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcataatgacaggatcgaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactagcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcacatgcagagacacacataggctcaaaataaagggatggaggaagatctaccaagcaaacggaaaacaaaaaaaggcaggggttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcaccaagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacattaataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaacaaggatacccaggaattgaactcagctctgcagcaagcggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctactccaaaattgaccacatactgggaagtaaagcactcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagttgttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggatgcattcaaagcagtgtgcagagggaaatttatagcactgaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaagggaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaaggataaacaaaattgatagaccgctagcaagactaataaagaaaaaaagagagaagaatcaaatagatgcaataaaaaaatgataaaggggatatcaccaccaatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctggacacatacactctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgacgccagcatcattctgataccaaagccaggcagagacacaacaaaaaaagagaattttagaccaatatccttgatgaacattgaggcaaaaatcctcaataaaacactggcaaaatgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcataaaaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattctctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaagggcctcttcaaggagaactacaaacctctgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactcctcaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcacagaactggaaaaaactactttaaagttcatatggaaccaaaagagagcccacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatattgatcaatggaacagaacagggccctcagaaataacgccgcatatctacaactatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagagttaaacgttagacctaaaaccataaaaaccctagaagaaaacgtaggcattaccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacatttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactggaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctataaagacacatgcacacgtatgtttattgcggcattattcacaatagcaaagacttggaaccaacccaaatgtctaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatggacacaggaaggggaatatcacactctggggactgttgtggggtggggggaggggggagggatagcattgggagatatacctaatgctagatgacgagttagtgggtgcagcgcaccagcatggcacatgtatacatatgtaactaacctgcacaatgtgcacatgtaccctaaaacttaaagtataataaaaaataaaaataataataataataaaaataaaaaagaaaaaaaaaa e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e calJac3.chr7 64667177 2326 + 155834243 I e ponAbe2.chr1 30115888 1452 - 229942017 I e chlSab2.chr20 28204822 0 - 130588469 C e rheMac3.chr1 33412053 1631 + 229590362 I e papAnu2.chr1 32688450 0 + 220367699 C e macFas5.chr1 29925280 0 - 227556264 C e panTro4.chr1 30527790 0 + 228333871 C a score=182.000000 s hg38.chr1_KI270760v1_alt 97088 2 + 109528 aa s calJac3.chr7 64669503 2 + 155834243 aa i calJac3.chr7 I 2326 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e ponAbe2.chr1 30115888 1452 - 229942017 I e chlSab2.chr20 28204822 0 - 130588469 C e rheMac3.chr1 33412053 1631 + 229590362 I e papAnu2.chr1 32688450 0 + 220367699 C e macFas5.chr1 29925280 0 - 227556264 C e panTro4.chr1 30527790 0 + 228333871 C a score=16448.000000 s hg38.chr1_KI270760v1_alt 97090 15 + 109528 aagaagtgcttttca s panTro4.chr1 30527790 15 + 228333871 aagaagtacttttca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117340 15 - 229942017 aagaagtgcttttca i ponAbe2.chr1 I 1452 C 0 s rheMac3.chr1 33413684 15 + 229590362 aagaagtgctttttg i rheMac3.chr1 I 1631 C 0 s chlSab2.chr20 28204822 15 - 130588469 aagaagtgctttttg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669505 15 + 155834243 agggagtgcttttcc i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I e papAnu2.chr1 32688450 0 + 220367699 C e macFas5.chr1 29925280 0 - 227556264 C a score=278430.000000 s hg38.chr1_KI270760v1_alt 97105 118 + 109528 cctcctgccacgattctgaggcctccccagccatgttgaactgtgagtccaattaaacctctttttcttcccagtcttgggtatgtctttatcagcagtgtgaaaacagtctaataca s panTro4.chr1 30527805 118 + 228333871 cctcctgccacgattctgaggcctccacagccatgttgaactgtaagtccaattaaacctctttttcttcccagtcttgggtatgtctttatcagcagtgtgaaaacagtctaataca i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117355 118 - 229942017 cctcctgccatgattctgaggcctccccagccacgttgaactgtaagttcaattaaacctctttttcttcccagtcttgggtatgtctttatcagcagtgtgaaaacagactaataca i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33413699 118 + 229590362 ccttctgccatgattctgaggcctccccagtcatgtggaactgtaagtccaattaaacttctttttcttcccagtcttgggtatgtctttatcaacagtgtgaaagcagactaataca i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925280 118 - 227556264 ccttctgccatgattctgaggcctccccagtcatgtggaactgtaagtccaattaaacttctttttcttcccagtcttgggtatgtctttatcaacagtgtgaaagcagactaataca i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688450 118 + 220367699 ccttctgccatgattctgaggcctccccagtcatgtggaactgtaagtccaattaaacttctttttcttcccagtcttgggtatgtctttatcaacagtgtgaaagcagactaataca i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28204837 118 - 130588469 ccttctgccatgattctgaggcctccccagccatgtggaactgtaagtccaattaaacttctttttcttcccagtcttgggtatgtctttatcaacagtgtgaaagcagactaataca i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669520 118 + 155834243 cctcccaccatgtttctgaggcctccccagccatgtggaactgtaagtccagttaaacctctttgttttcccaatcttgtgtatgtctctctcagcagcatgaaaacagattaataca i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 561292 463 - 28733288 I e canFam3.chr2 15017775 104 - 85426708 I a score=17518.000000 s hg38.chr1_KI270760v1_alt 97223 6 + 109528 GCTCTC s panTro4.chr1 30527923 6 + 228333871 GCTCTC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117473 6 - 229942017 GCTCTC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 561755 6 - 28733288 GTTCTC i nomLeu3.chr24 I 463 C 0 s rheMac3.chr1 33413817 6 + 229590362 GCTCCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925398 6 - 227556264 GCTCCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688568 6 + 220367699 gctcCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28204955 6 - 130588469 GCTCCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669638 6 + 155834243 GCTCTC i calJac3.chr7 C 0 C 0 e canFam3.chr2 15017775 104 - 85426708 I a score=156221.000000 s hg38.chr1_KI270760v1_alt 97229 47 + 109528 CATTCACATTTCTTCCTGATCGATCTACTGGCA--------T-------ACCTTCAGCTTCT s panTro4.chr1 30527929 47 + 228333871 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------ACCTTCAGCTTCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117479 47 - 229942017 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------ACCTTCAGCTTCT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 561761 54 - 28733288 CATGTACATTTCTTCCTGAGTGATCTATTGACA--------TGAAATTGGCCTTCAGCtttt i nomLeu3.chr24 C 0 I 389 s rheMac3.chr1 33413823 47 + 229590362 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------GCCTTCAGCTTCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925404 47 - 227556264 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------GCCTTCAGCTTCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688574 47 + 220367699 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------GCCTTCAGCTTCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28204961 47 - 130588469 CATTCACATTTCTTCCTGATTGATCTACTGGCA--------T-------GCCTTCAGCTTCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669644 47 + 155834243 CATTCACAGTTCTTTTTGATTAATCTACTGGCA--------T-------GCCTTCAGCTTTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15017879 55 - 85426708 CATTGACATTTCTTCCAGAATGATCGGCTGACACTAAGTTTT-------GCCTTTGACTTGT i canFam3.chr2 I 104 C 0 a score=379295.000000 s hg38.chr1_KI270760v1_alt 97276 140 + 109528 CACTACAATAATTATTATAATCACCACTAGTCAATGAACTCATGACTGTAGTCTCCACTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC s panTro4.chr1 30527976 140 + 228333871 TACTACAATAATTATTATAATCATCACTAGTCAATGAACTCATGACTGTAGTCTCCACTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117526 140 - 229942017 TACTACAATAATTATTATAATCACCACTAGTCAATGAACTCATGACTGTAATCTCCACTAATGTAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33413870 140 + 229590362 TACTATACTAATTATTATAATCACCACTAGTCAATGAACTCACAACTGTAATCTCCACTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925451 140 - 227556264 TACTATACTAATTATTATAATCACCACTAGTCAATGAACTCACGACTGTAATCTCCACTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688621 140 + 220367699 TACTATACTAATTATTATAATTACCACTAGTCAATgaactcatgactgtaatctccaCTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGCCCCATTAACATGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205008 140 - 130588469 TATTATACTAATTATTATAATCACCACTAGTCAATGAACTCATGACTGTAATCTCCACTAATATAATTGCAGTTAAACAGATAT------AAATAATTCCTAGCCCCATTAACACGACAAAAAGTAGG-TAAATGCAATCTGTC--ACC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669691 139 + 155834243 TATTACAACAATTATTATGATCAGCACTAGTAAATGAAGTCATGACTGTAATCTCCACTAATATAATTGCAGTTAGACAGATAT------AAATAATTCCTAGTCCCATTAACATGAC-AAAAGTAGG-TAAATGCAATCTGTC--AAC i calJac3.chr7 C 0 I 1 s canFam3.chr2 15017934 146 - 85426708 TGTTACCATAATTATTATAATCCCCGCTCGTCAGTGAACCCCTGACCCAACTCTCCAC---TGTAATCGCTGTTAGATACAAATAATTCGAAATAATTCGTGCCCTCGTTAACGCGGTAACAAGTAGGCTAAGTGTAACCAGTTAGACC i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 561815 389 - 28733288 I a score=216741.000000 s hg38.chr1_KI270760v1_alt 97416 75 + 109528 TGTGTGGTCTGGGAATCTAT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCATGAACAAGC s panTro4.chr1 30528116 75 + 228333871 TGTGTGCTCTGGGAATCTAT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCATGAACAAGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117666 75 - 229942017 TGTGTGGTCTGGGAATCTGT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCATGAACAAGC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 562204 78 - 28733288 TGTGTGATTTGGGCTTCTGTGCCTCTTCAGACTTCTCTCAACTTGGACAAATCCATCTGCTCCTCTGCATGAACAAGC i nomLeu3.chr24 I 389 I 106 s rheMac3.chr1 33414010 75 + 229590362 TGTGTGGTCTGGGAATCTGT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCGTGAACAAGC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925591 75 - 227556264 TGTGTGGTCTGGGAATCTGT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCGTGAACAAGC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688761 75 + 220367699 TGTGTGGTCTGGGAATCTGT---CCTTCAGGTCTTTGTCAGCTTGGGCGAGCCCTTCTGCTCCTCTCCATGAACAAGC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205148 75 - 130588469 TGTGTGGTCTGGGAATCTGT---CCTTCAGGTCTTTGTCAGCTTGGGCAAGACCTTCTGCTCCTCTCCATGAACAAGC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669831 75 + 155834243 TGTATAGTCTGGGAATCTGT---TCTTCAGGTCATTGTTGGCTTGGTCGAGCCCCTCTGCTCCTCTCCATGAACGAGC i calJac3.chr7 I 1 C 0 s canFam3.chr2 15018080 43 - 85426708 TCTGTG-TCTGGGCATCTCT---ACTTC-------------------------------CGCAACCCCACGCACCAGC i canFam3.chr2 C 0 C 0 a score=82984.000000 s hg38.chr1_KI270760v1_alt 97491 36 + 109528 TTGTTCATTCTCCTGTCCCCA-----TGGTCAGCAGGGTGG s panTro4.chr1 30528191 36 + 228333871 TCGTTCATTCTCCTGTCCCCA-----TGGTCAGCAGGGTGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117741 36 - 229942017 TAATTCATTCTCCTGTCCCCA-----TGGTCAGCAGGGTGG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33414085 36 + 229590362 TCATTCATTCTCCTGTCCCCA-----TGGTCAGCAGCGTGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925666 36 - 227556264 TCATTCATTCTCCTGTCCCCA-----TGGTCAGCAGCGTGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688836 36 + 220367699 TCATTCATTCTCCTGTCCCCA-----TGGTCAGCAGCGTGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205223 36 - 130588469 TCATTCATTCTCCTGTCCCCA-----CGGTCAGCAGTGTGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669906 26 + 155834243 TCACTCATT----------CA-----CGGTCAGCAGGGTGA i calJac3.chr7 C 0 C 0 s canFam3.chr2 15018123 41 - 85426708 CCCTTGGTCCTCCTGCCCCCACAGCCCGGGCCGCAGGGTGG i canFam3.chr2 C 0 I 16 e nomLeu3.chr24 562282 106 - 28733288 I a score=1417026.000000 s hg38.chr1_KI270760v1_alt 97527 581 + 109528 AGTGGGTAGCCCCACCCTGAGGAACACATCACTGTAGATCTGCAGTGACTACTCTGGCTTTGCCACTGCACTGCTTGTGAAGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAATactatgcaccagtatcaatccattttatgagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattattcatagaaagtcagcaaaggacaaaagaagtctttgattaatggagagtcctccaaggctcaggaaaactgcccaaggtaggcagagtcttgcctgcatgtgctccacttgcacggcaaccaagagatcctgaaagcagtctgctctgggttctgtaccccagggagaatatgactcactgggccacagcattgtaggatatcctgctctaggagggacaggaacagagcctgggctattcctgccagttcctcctaatctttggaatgtgttgcattctcaccacactgtacagttattctgagaacttcaagtgagaaaagggggaagagctgggtcaccaaggccatccagggactcgt s panTro4.chr1 30528227 581 + 228333871 AGTGGGTAGCCCCTCCCTGAGGAACACATCACTGTAGATCTGCAGTGACTACTCTGGCTTTGCCACTGCACTGCTTGTGAAGCAGGCTCACTGTATGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAATactatgcaccagtatcaatccattttataagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattattcatagaaagtcagcaaaggacaaaagaagtctttgattaatggagagtcctccaaggctcaggaaaactgcccaaggtaggcagcatcttgcctgcatgtgctccacttgcactgcaaccaagagatcctgaaagcagtctgctctgggttctgtaccccagggagaatatgactcactgggccacagcattgtaggatatcctgctctaggagggacaggaacagagcctgggctattcctgccagttcctcctaatctttggaatgtgttgcattctcaccacactgcagagttattctgagaacttcaagtgagaaaagggggaagagctgggtcaccaaggccatccagggactcgt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30117777 581 - 229942017 AGTGGGTAGCCCCTCCCTGAGGAACACATCACTGTAGATCTGCAGTGACTGCTCTGGCTTTGTCACTGCACTGCTTGTGAAGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAAGAAGACTCTAAACATTTGCCCAATactatgcaccagtatcaatccattttatgagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattactcataaaaagtcaggaaaggacaaaagaagtctttgattaatggagagccctccaaggctcaggaaaactgcccaaggtaggcagagtcttgcctgcatgtgctccacttgcactgcaaccaagagatcctgaaagcagtttgctctgagttctgtaccccggggagaatatgactcactgggccacagcattgtaggatatcctgctctaggagagacaggaacagagcctgggctattcctgccagttcctcctaatctttggaatgtattgcattctcaccacactgtacagttattctgagaacttcaagtgagaaaagggggaagagctgggtcaccaaggccatgcagggactcgt i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33414121 580 + 229590362 AGTGGGTAGCCCCTCCCTGAGGAGCACATCACTGTAGATCTGCAATGACTACTCTGG-TTTGCCACTGCACTGCTTGTGAGGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAATactatgcaccagtatcaacccattttatgagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattattcatagaaaggcagcaaaggacaaaagaagtctttgattaatggagagtcctccaaggctcaggaaaactgcccaaggtagtcaaagtcttgccagcatgtgctccacttgcactgcaaccaagagatcctgaaagcagtttgctctgggttttgtaccccgggaagaatatgactcactgggccacagcgttgtaggatatcctgctctaggagggacaggaacagaacctgggctattcctgccagttcctcctaatttttggaaggtgttgcattatcaccaccctgtacagttattctgagaacttcaagtgagaaaaaggggaatagctgggtcaccaaggccatccagagactcat i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29925702 581 - 227556264 AGTGGGTAGCCCCTCCCTGAGGAGCACATCACTGTAGATCTGCAATGACTACTCTGGCTTTGCCACTGCACTGCTTGTGAAGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAATactatgcaccagtatcaacccattttatgagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattattcatagaaaggcagcaaaggacaaaagaagtctttgattaatggagagtcctccaaggctcaggaaaactgcccaaggtagtcaaagtcttgccagcatgtgctccacttgcactgcaaccaagagatcctgaaagcagtttgctctgggttttgtaccccggggagaatatgactcactgggccacagcgttgtaggatatcctgctctaggagggacaggaacagaacctgggctattcctgccagttcctcctaatttttggaatgtgttgcattatcaccaccctgtacagttattctgagaacttcaagtgagaaaagggggaatagctgggtcaccaaggccatccagagactcat i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32688872 581 + 220367699 AGTGGGTAGCCCCTCCCTGAGGAGCACATCACTGTAGATCTGCAATGACTACTCTGGCTTTGCCACTGCACTGCTTGTGAAGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAATACTATGCACCAGTATCAACCCATTTTATGAGTCTGGTGAGACAGGACACTCACAC--AAGTTAAGTGAAGCAACTTTATTATTCATAGAAAGGCAGCAAAGGACAAAAGAAGTCTTTGATTAATGGAGAGTCCTCCAAGGCCCAGGAAAACTGCCCAAGGTAGTCAAAGTCTTGCCAGCATGTGCTCCACTTGCACTGCAACCAAGAGATCCTGAAAGCAGTTTGCTCTGGGTTTTGTACCCCGGGGAGAATATGACTCACTGGGCCACAGCATTGTAGGATTTCCTGCTCTAGGAGGGACAGGAACAGAACCTGGGCTATTCCTGCCAGTTCCTCCTAATTTTTGGAATGTGTTGCATTATCACCACCCTGTACAGTTATTCTGAGAACTTCAAGTGAGAAAAGGGGGAAGAGCTGGGTCACCAAGGCCATCCAGAGACTCAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205259 581 - 130588469 AGTGAGTAGCCCCTCCCTGAGGAACACATCACTGTAGATCTGCAATGACTACTCTGGCTTTGCCACTGCACTGCCTGTGAAGCAGGCTCACTGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACATTTGCCCAGTactatgcaccagtatcaacccattttatgagtctggtgagacaggacactcacac--aagttaagtgaagcaactttattattcatagaaaggcagcaaaggacaaaagaagtctttgattaatggagagtcctccaaggctcaggaaaactgcccaaggtaggcagagtcttgcctgtatgtgctccacttgcactgcaaccaagagatcctgaaagcagtttgctctgggttttgtaccccagggagaatatgactcactggcccacagcattgtaggatatcctgctctaggagggacaggaacagaacctgggctattcctgccagttcctcctaatctttggaatgtgttgcattatcaccaccctgtacagttattctgagaacttcaagtgagaaaagggggaagagctgggtcaccaaggccatccagagactcgt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64669932 570 + 155834243 AGTGGGTAGCCCCTCCCTGAGGAACACATCACTATACATCTGCAGTGACTACTCTGGCTTTGCCACTGCACTGCTTGTGAAACAGCCTTAGCGTGTGCCCTTATCAATCTCAGAGGAAGACTCTAAACGTTTGGCCAATactatgcaccagtatcaatccattttatgagtctggtgagacaggacactcacacataagttaagtgaagcaactttattattcatagaaaggcagcaaaggacaaaagaagtctttgattaatggagaatcctccaaggctcaggaaaactgcccaaggtaggcagagtcttgccagcatgtgctccacttgcgctgcaaccaagagatcccgaaagcagttcgctctgggttttgtaccccagggagaatatgactcactgggccacagcattgtaggatatcctgctctaggagggacaagaacagagcctgggttgttcctgcccgtttcttctaatctccagcatgtgccctattctcagcaca-------------ctgagaccttcaagtgagaaaagtggggaaagctgggtcaccagcgccatccagggatttgt i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 562282 106 - 28733288 I e canFam3.chr2 15018164 16 - 85426708 I a score=68804.000000 s hg38.chr1_KI270760v1_alt 98108 23 + 109528 cctgcaCTGCTGgctgccaagtt s panTro4.chr1 30528808 23 + 228333871 cctgcaCTGCTGgctgccaagtt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30118358 23 - 229942017 cctgcaCTGCTGGCTGCCAAGTT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33414701 23 + 229590362 cctgcaCTGCTGgctgccaagtt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29926283 23 - 227556264 cctgcaCTGCTGGCTGCCAAGTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32689453 23 + 220367699 CCTGCACTGCTGGCTGCCAAGTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205840 23 - 130588469 cctgcaCTGCTGGCTGCCAAGTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64670502 23 + 155834243 cctacaCTGCCGGCTGCCAAGTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15018180 23 - 85426708 CCTGCCGCGCTGGCTGCTGCGTC i canFam3.chr2 I 16 C 0 e nomLeu3.chr24 562282 106 - 28733288 I a score=2393036.000000 s hg38.chr1_KI270760v1_alt 98131 840 + 109528 ttgagaacttaaactgaacccagtatggtgctaagtgccttgccaacctgactctcagaaaaaggtgccattctcatccccattttacagatgtgaaaacc----agggtt-agcagtgttaagtgacttgaccaaagtcctgcaaatactgagtgat-aagccagct--------------------------gagcacaca------------tttttctACTAACACATGGAACCAG---------------------AACTCCTCCTCTCTATCCCCTTTTT--------------------TCCTCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCACAGCCCAGCACCA------------CAAAGTTTCTGTGGACAGGCAGCCTGAGATCTGAGATTCCATATCACCTTCTGCAACAGCAAGGGGGATATGGCTTCAGAGACACCCTTGCATTATTGG----AGGATGG-CCGAGGCTTCCAAACTTACAACCCACTC-GAGGCCCCTCCCCTGGCTCGG-----AGCTGCGTGCCTGGAAGAAGACGCGTTGATTTCTCCTTCACTTCTAGCAGCTCACCCGAGGGACCATCCCCATCCTCAGCATCCCGTCGCTGCAGGTGTGTGGGTGATGATTACACTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CCCACATCATCCTGGGAAGCGGAGCATTATGCCCTTTGAATGGGGGGGAAACagg------------------------------------------------------tcaca-----------------caggaaggtaggggc---------------agaaccagcatcagatcccagagtctctcattcccagGTCAGCATCTGTAGCAAAAGGGCAGGCCAAACCTGTGAGTTGGTCACGATG---------------TCGGTTGTTTTAGTTTTTATTTCAGCACGAGTCTCA-CCTGCCTGCTCTTCAGAGCCATAGGGGAGGGCAGGGCC s panTro4.chr1 30528831 840 + 228333871 ttgagaacttaaactgaacccagtgtggtgctaagtgccttgccaacctgactctcagaaaagggtgccattctcatccccattttacagatgtgaaaacc----agggtt-agcagtgttaagtgacttgaccaaagtcctgcaaatactgagtgat-aagccagct--------------------------gagcacaca------------tttttctACTAACACACGGAACCAG---------------------AACTCCTCCTCTCTATCCCCTTTTT--------------------TCCTCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCACAGCCCAGCACCA------------CCAAGTTTCTGTGGACAGGCAGCCTGAGATCTGAGATTCCATATCACCTTCTGCAACAGCAAGGGGGATATGGCTTCAGAGACACCCTTGCATTATTGG----AGGATGG-CTGAGGCTTCCAAACTTATAACCCACTC-GAGGCCCCTCCCCTGGCTCGG-----AGCTGCGTGCCTGGAAGAAGACGCGTTGATTTCTTCTTCACTTCTAGCAGCTCACCCGAGGGACCATCCCCATCCTCAGCATCCCATCGCTGCAGGTGTGTGGGTGACGATAACACTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCACATCATCCTGGGAAGTGGAGCATTATGCCCCTTGAATGGGGGGGAAACagg------------------------------------------------------tcaca-----------------caggaaggtaggggc---------------agaaccagcatcagatcccagagtctctcattcccagGTCAGCATCTGTAGCTAAAGGGCAGGCCCAGCCTGTGAGTTGGTCACGATG---------------TCGGTTGTTTTAGTTTTTATTTCAGCACGAGTCTCA-CTTGCCTGCTCTTCAGAGCCATAGGGGAGGGCAGGGCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30118381 845 - 229942017 TGGAGAACTTAAACTGAACCCAGTGTGATGCTAAGTGtcctgccaacctgactctcagaaaaaggtgcccttctcatccccattttatagatgtgaaaatc----agggtt-agcagtgttaagtgacttgaccaaagtcctgcaaatactgagtgat-aagccagct--------------------------gagcacaca------------tttttctaaTAACACATGGAGCCAG---------------------AACTCCTCCTCTCTATCCCCTTTTT--------------------TCCTCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCGCAGCCCAGCACCACCAAGTTTCTGTCCAAGTTTCTGTGGACAGGCAGCCTGAGATCTGAGATTCCATAACACCTTCTGCAACAGCAAGGCAGATATGGCTTCAGAGACACCCTTGCATTATGGG----AGGAAGG-CCAAGGCTTCCAGACTTACAACCCACTA-GAGGCCCCTCCCCTGGCTCGG-----AGCTGCGTGCCTGAAAGAAGACGCATTGATTTCTCCTTCACTTCTAGCAGCTCACCCGAGGGACCATCCCCATCCTCAGCATCCCGTCGCTGCAGGTGTGTGGGTGATGATAACACTGTTCCCAGGTTCACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCAAGTGAT-CTCACAGCATCCTGGGAAGCAGAGCATTATGCCGCTTGAAT---GGGGAAACagg------------------------------------------------------tcaca-----------------taggaaggtaggggc---------------agaaccagaatcagatcccagagtctttcattcccaggtcag----tgTAACAAAACGGCAGGCCCAACCTGTGAGTCGGTCAGGATG---------------TCGGTTGTTTTAGTTTTTATTTCAGCACGAGTCTCA-CCTGCCTGCTCTTCAGAGCCATAGGGGAGGGCGGGGCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 562388 952 - 28733288 TTGAGGACTTGTGCTGA----GGCACAGTACTGAATGTTTGCCAAGATTCTctctgagaaatgggcatcattcttatccccactttacagatgtgaaaactg---aagttt-agaacagttgaatgactagcccaaagtcccccaaatactgagtggtggagccagcctttgattttagatttttctgattctagagcccACAATTTCTGCTTGCATTTTGTACCATAGAATGGAAACAGTCCTCCCCCAAATGTTCCGCTGtctccttctctttgtctttctcttcctcctcatcctctcccacctcctcctcttcttctcaccctccttcttcctccccat-tcctctgtaaacctcttctttctctctttcccttccccAGATACTTGCCCCCAGCCCAGCACTG------------CCAAACCTTTGTAGCCAGGATGTTTAAGAGCTGAGATTCCATGTCACCTGCTGGGACAGCAAAGGGAATATGGCTTCAGAGACACCCCTACATTATGGGAGGAAGGATGG-CCAAGGCCTCCA-----------------GAGGCCCCTCCCCTGGCTCGG-----AGCTGTGTGCCTGGAAAAAGGCATGTTGGTTTCTCCTTCACTTCTAGCAGCTCAGCTGAGGGACCACCCCTTTCCTCAGCATCCCGTCACTGCAGGCGTGTGGGTGACGAGAACACTGTTCCCAGGTTTACTTTCACACGG-TGCGCCCGGGAGTTTCTCCTGGACCTCACGTGATCCTCACATTATCCTGGGAAGTGGAGCATTATGCCCCTTGAAT---GGGGAAACagg------------------------------------------------------tcaca-----------------caggaaggtaggggc---------------agagccagcatcagatcccagagtctctcattcccaggtcggtgTCTGTAATGCAAGGGCAGGCCCAACCTGTGAGTCGGTCACGACG---------------TCGGTTGTTTTAGTTTTTATTTCAGCAAGAGTCTCA-CCTGCCTGCTCTTCAGAGCCGTGGGAGAGGGTGGGGCc i nomLeu3.chr24 I 106 I 2 s rheMac3.chr1 33414724 840 + 229590362 ttgagaacttaaactgaacctagtatggtaccaagtgccttgccagcctgactctcagaaaaaggtgccattctcatccccattttacagatgtgaaaactttgcagggtt-agcagtgtttagtgacttgaccaaagtcctgcaaatactgagtgat-aagccaggt--------------------------gagcacaca------------tttttctACTAACACATGGAGCCAG---------------------AACTCCTCGTCGCTCTCCCCTTTTT--------------------TCTGCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCACAACCCAGCACCA------------CCAAGTTTCTGTGGACAAGCAGCTTGAGATATAAGATTCCGTATCACCTTCTGCAACAGCAAGAGGGATATGGCTTCAGAGACACCCTTGCATTATGGG----AGGAAGG-CCAAGGCCTCCAGACTTACAACCCACTC-GAGGCCCCTCCCCTGGCTTCG-----AGCTATATGTCTGGAAGAAGATGCCTTGATTTCTCCCTCACTTCTAGCAGCTCACCCAAGGAACCATCCCCATCCTCAGCATCGCGTCGCTGCAGGTGTGTGGGTGACAATAATGCTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCACAGTGTCCTGGGAAGCAGAGCATTATGCCACTTGAAT---GGGGAAACagg------------------------------------------------------tcaca-----------------tcggaaggtaggggc---------------agaaccagcatcagatcccagagtctctcattcccagGTCAGCATCTGTAACAAAAGGGCAGG-CCAACCTGTGAGTCTGTCAGGATG---------------TCAGTTATTTTAGTTTTTATTTCAGCACGAGTCTCA-CTTGCCTGCTCTTCAGAGCCATGGGGGAGGGTGGGGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29926306 840 - 227556264 TTGAGAACTTAAACTGAACCTAGTATGGTACCAAGTGCCTTGCCAGCCTGactctcagaaaaaggtgccattctcatccccattttacagatgtgaaaactttgcagggtt-agcagtgtttagtgacttgaccaaagtcctgcaaatactgagtgat-aagccaggt--------------------------gagcacaca------------tttttctACTAACACATGGAGCCAG---------------------AACTCCTCGTCGCTCTCCCCTTTTT--------------------TCCGCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCACAACCCAGCACCA------------CCAAGTTTCTGTGGACAAGTAGCTTGAGATATAAGATTCCGTATCACCTTCTGCAACAGCAAGAGGGATATGGCTTCAGAGACACCCTTGCATTATGGG----AGGAAGG-CCAAGGCCTCCAGACTTACAACCCACTC-GAGGCCCCTCCCCTGGCTTCG-----AGCTATATGTCTGGAAGAAGATGCCTTGATTTCTCCCTCACTTCTAGCAGCTCACCCAAGGAACCATCCCCATCCTCAGCATCGCGTCGCTGCAGGTGTGTGGGTGACAATAATGCTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCACAGCGTCCTGGGAAGCAGAGCATTATGCCACTTGAAT---GGGGAAACagg------------------------------------------------------tcaca-----------------tcggaaggtaggggc---------------agaaccagcatcagatcccagagtctctcattcccagGTCAGCATCTGTAACAAAAGGGCAGG-CCAACCTGTGAGTCTGTCAGGATG---------------TCAGTTATTTTAGTTTTTATTTCAGCACGAGTCTCA-CTTGCCTGCTCTTCAGAGCCATGGGGGAGGGTGGGGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32689476 841 + 220367699 TTGAGAACTTAAACTGAACCTAGTATGGTACCAAGTGCCTTGCCAGCCTGACTCTCAGAAAAAGGTGCCAttctcatccccattttacagatgtgaaaactttGCAGGGTTAAGCAGTGTTTAGTAACTTGACCAAAGTCCTGCAAATACTGAGTGAT-AAGCCAGGT--------------------------GAGCACACA------------TTTTTCTACTAACACATGGAGCCAG---------------------AACTCCTCGTCGCTCTCCCCTTTTT--------------------TCcgccttttctt---------catcttcctccctAG-TCTT----------------------------------------TTCCCCACAACCCAGCACCA------------CCAAGTTTCTGTGGACAAGCAGCTTGAGATATGAGATTCCATATCACCTTCTGCAACAGCAAGAGGGATATGGCTTCAGAGACACCCTTGCATTATGGG----AGGAAGG-CCAAGGCCTCCAGACTTACAACCCACTC-GAGGCCCCTCCCCTGGCTTCG-----AGCTATATGTCTGGAAGAAGATGCCTTGATTTCTCCCTCACTTCTAGCAGCTCACCCAAGGAACCATCCCCATCCTCAGCATCGCGTCGCTGCCGGTGTGTGGGTGACAATAATGCTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCACAGCGTCCTGGGAAGCAGAGCATTATGCCACTTGAAT---GGGGAAACAGG------------------------------------------------------TCACA-----------------TCAGAAGGTAGGGGC---------------AGAACCAGCATCAGATCCCAGAGTCTCTCATTCCCAGGTCAGCATCTGTAACAAAAGGGCAGG-CCAACCTGTGAGTCTGTCAGGATG---------------TcagttattttagtttttatttcagcaCGAGTCTCA-CTTGCCTGCTCTTCAGAGCCATGGGGGAGGGTGGGGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28205863 838 - 130588469 TTGAGAACTTAAACTGAACCTAGTATGGTACTAAGTGCCTTGCCAGCCAGA--CTCAGAAAAAGGTGCCattctcatccccattttacagatgtgaaaactttacagggtt-agcagtgtttagtgacttgaccaaagtcctgcaaatactgagtgat-aagccaggt--------------------------gaacacaca------------tttttctACTAACACATGGAGCCAT---------------------AATTCCTCCTTGCTCTCCCCTTTTT--------------------TCCTCCTTTTCTT---------CATCTTCCTCCCTAG-TCTT----------------------------------------TTCCCCACAACCCAGCACCA------------CCAAGTTTCTGTGGACAAGCAGCTTGAGATATGAGATTCCATATCACCTTCTGCAACAGCAAGAGGGATATGGCTTCAGAGACACCCTTGCATTATGGG----AGGAAGG-CCAAGGCCTCCAGACTTACAACCCACTC-GAGGCCCCTCCCCTTGCTCGG-----AGCTATATGTCTGGAAGAAGATGCCTTGATTTCTCCCTCACTTCTAGCAGCTCACCCGAGGAACCATCCCCATCCTCAGCATCGCGTCGCTGCTGGTGTGTGGGTGACGGTAATGCTGTTCCCAGGTTTACTTTCACACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCACAGCATCCTGGGAAGCAGAGCATTATGCCACTTGAAT---GCGGAAACagg------------------------------------------------------tcaca-----------------ttggaaggtaggggc---------------agaaccagcatcagatcccagagtctctcatt-ccaggccagtgtctgtAACAAAAGGGCAGGCCCAACCTGTGAGTCTGTCAGGATG---------------TCAGTTATTTTAGTTTTTATTTCAGTACGAGTCTCA-CCTGCCTGCTCTTCAGAGCCATGGGGGAGGGTGGGGCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64670525 809 + 155834243 TTGAGAACTTAAGCTGAACCTAGTGTGGTGCTAAGTTCCCTGCCAGCCTTactcttagaaaaagatgccattctcatccccatttgacagatgtgaaaacc-----aggtt-agcagtgtta---gacttgatcaaagggctgcaaacactgagtgct-aagctagct--------------------------aagcacaca------------ttctcctacta-cacgtggagccag---------------------aactcct--tcTCTCTCTCCTTTCT--------------------TTCTCCTTTTCTT---------CATCTTTCTCCCTAA-ACTT----------------------------------------TTCCCCATAGCCCAGCACCA------------CCAAGTTTCTGTGGACAAGCATCTTGAGATCTGAGATTCCACATCACCCTCTGCAACAGCAATTGGGGTGTGCCTTCAGAAACACCCCTACATTATGGG----AGAAAGG-CCAAGGCCTCCAGACTTACAACCCATTCTGAGGCCCCTCCCCTGGCTCGG-----AGCTGCATGCCTGGAAGAAGACACGTTGGTTTCTCCTCCACTTCTAGCAGTTCACCTGAGGGACCGTCTCCATCCTCATCATCCCATCGCTGCAGGTGTGTGAGTAAAGACCACGTTGTTCCCGGGTTTACTTTCATACAG-TGTGCCAAGGAGTTTCTCCTGGACCTCATGTGAT-CTCATAGCATCCTGGGAAGTGGAGCATTAT------------------------g------------------------------------------------------tcaca-----------------caggaaggtaggggc---------------agtaccagcatccgatcccagagtctctcattcccaggccAGCGTCTGTAACAAAAGGGCAGGCCTAACCTATGGGTCGGTCAGGAGG---------------TTGATTGTTTTAGTTTTTCTTTCAGCCTGAGTTGCA-CCTGCCTGCTCTTCAGAGCCATGGGGAAGGGtggggc- i calJac3.chr7 C 0 C 0 s canFam3.chr2 15018203 907 - 85426708 CTGGGAACTTACCCTGGGCCAGGCGTGGTGCTTGGCGCCCTGCAAGCATCACCGTCGGGAGA-------ATGCTCAT----------------Tgagaccc----agggtt-aggacgggcgagggatttgaccagcatcctgcagatactgagtcat-gagccagctcttggccaccggtcttcctgactccagagctcacc------------tttttc-acCAACATCTGGAGCCAG---------------------AGGTCCTCCTCCCTCTCCGGGCCTT--------------------------------C---------AGTGCTCCTCCCCAGCTCTT----------------------------------------GGCTCCATGGCCCAGCTCCA------------CCAAGGGCCCTCGGACAGGCAGGCTGAGATCTG------------ATCTGCTGGGACCGTGAAAGGAATCTGGCTTCAGGGACACCCTGACCTTATGGG----GAGAGGGTCTAGGGCCTCCAAGATCACA---------GTG----CCGCCCTGGTTTGGGAACCAGCTGC---CCCAGGGGATGACACTCTGGTTTTCCCTTCACTTTTAGCAGCTCAGATGAGCACGTAGGGCAACCCCGAGCATCACCTTGCTGCAGAGGT-TGAGCGACGATAATGCTGTTTGTGGGGTAGCTTTCACACAGTTGCACCAAGGAGCATCT-TTGGGCctcatgggaccctcacggcaacctgagaaatagagcattaggccccttgaat---ggggaaactggctcagagtgattTTTttgaagctaaaggactctagagatcctctgtcttctcatttacagataaagaagctgaaacccagagagcagtgaccagcgagtgtgtgagagaaccagcaccacatcccagggccccctgttcccaagctgctgcccACA-CACAGCGGCAGGTGCGACCTGTGAGTCAGGCTGGGAGGGCAATGATTTTTTTTTGTCTGGTTTTGTTTTTGGCTTCGCACAGTTCCCAGCCTGCATGCTCTTCCGAGAAGTTGGAGGGGTGggagc- i canFam3.chr2 C 0 C 0 a score=208214.000000 s hg38.chr1_KI270760v1_alt 98971 132 + 109528 AGAGCTGTCTGGATTCAGCTCAGGGCCCTGCCTGCCCCTGACTGGCCCAGAGCCCCTCACCCTGCCGTTGACCCCTGTCCTACCCCCTATGATGCAGTCTGCCTCGTACAGCCCAGGAGAAGTTCCCAGACA s panTro4.chr1 30529671 131 + 228333871 AGAGCTGTCTGGATTCAGCTCAGGGCCCTGCCTGCCCCTGACTGGCCCAGAGCCCCTCACCCTGCCGTTGACCCCTGTCCTACCCC-TATGACGCAGTCTGCCTCGTACAGCCCAGGAAAAGTTCCCAGACA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30119226 132 - 229942017 AGAGCTGTCTGGATTCAGCTCAGGGCCCTGCCTCCCCCTGACTGGCCCAGAGCCCCTCACCCTGCCGTTGACCCCTGTCCTACCCCCTATGATGCAGTCTGCCTCGTACAGCCCAGGAAAAGTCCCCAGGCA i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33415564 126 + 229590362 AGAGCTGTCTGGATTCAGCTCAGGGCCCTACCTGCCCCCG------CCAGAGCCCCTCACCCTGCCATTGACCCCTGTCCTACCCCCTATGACGCAGTCTGCCTTGTGCAGCCCAGGAAAAGTCCCCAGACA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29927146 126 - 227556264 AGAGCTGTCTGGATTCAGCTCAGGGCCCTGcctgcccccg------ccagagcccctcaccctgccattgacccctgtcctaccccCTATGACGCAGTCTGCCTTGTGCAGCCCAGGAAAAGTCCCCAGACA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32690317 126 + 220367699 AGAGCTGTCTGGATTCAGCTCAGGgccctgcctgcccccg------ccagagcccctcaccctgccattgacccctgtcctaccccctATGACGCAGTCTGCCTTGTGCAGCCCAGGAAAAGTCCCCAGACA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28206701 126 - 130588469 AGAGCTGTCTGGATTCAGCTCAGGGCCCTGcctgcccccg------ccagagccccttaccctgccgttgacccctgtcctaccccCTATGACGCAGTCTGCCTTGTGCAGCCCAGGAGAAGTCCCCAGACA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64671334 29 + 155834243 agagctgtctgaattcagctcagggcccc------------------------------------------------------------------------------------------------------- i calJac3.chr7 C 0 C 0 s canFam3.chr2 15019110 27 - 85426708 aggtctgtctggattcgaatccagctc--------------------------------------------------------------------------------------------------------- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 563340 2 - 28733288 I a score=1134906.000000 s hg38.chr1_KI270760v1_alt 99103 347 + 109528 GGGActaccactgactcatggtgtgtgacattgggca--agcgct-----------cctttgcctccactggcctca-----gttttctcatttgtaaaatgGTCTTTCACGGGACCAGGGCACTGAGTTTGACTCCTCG-------GCTACCTGTGCTCGGAGCATCCTGTTCCCCAGGGGC-TTCGGGGCTGGACGTGGCCTGCACGGCCGCTTGGCTCCACAGCAGCTG---------------------------------------------TTTCACTTCCTCAGCAAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCGTTTGGCCTGAATAAGTTGATTTGTCAAAATTACCATTTCCTGGGGCTGCTCACATCAG-AAGCAGCAGGTGGTTCTTCCATGTGCTT s panTro4.chr1 30529802 347 + 228333871 GGGActgccactgactcatggtgtgtgaccttgggca--agcgct-----------cctttgcctccactggcctca-----gttttctcatttgtaaaatgGTCTTTCACAGGACCGGGGCACTGAGTTTGACTCCTCG-------GCTACCTGTGCTCGGAGCATCCTGTTCCCCAGGGGC-TTCGGGGCTGGACGTGGCCTGCACGGCCGCTTGGCTCCACAGCAGCTG---------------------------------------------TTTCACTTCCTCAGCCAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCGTTTGGCCTGAATAAGTTGATTTGTCAAAATTACCATTTCCTGGGGCTGCTCACATCAG-AAGCAGCAGGTGGTTCTTCTGTGTGCTT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30119358 381 - 229942017 GGGActgccactgactcatggtgtgtgaccttgggca--agagct-----------cctttgcctccactggcctca-----gttttctcatctgtaaaatgGTCTTTCACGGGACCAGGGCACTGAGTTTGACTCCTTG-------GCTACCTGTGCTCGGAGCATCCTGTTCCCCAGAGGC-TTCAGGGCTGGACATGGCCTGCACAGCTGCTTGGCTCCACAGCAGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT---------TCAGCAAGGATTTTAATTCCTCCCGCTGG-AACT-GGGTCCAAGCG-TTAGCCTGAATAAGTTGATTGGTC-GAACTACTATTTCATGAGGCTGCTCACATAGGAAAGCAGCAGGTGGTTCTTCCGTGTGCTT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 563342 351 - 28733288 gggtctgacgctggctcagtgcgtgtgaccttgggca--cgtgct-----------cctttgcctcggtttgccacaggcctgttttctcatctgtaaaatggTCTTTTATGGGACCAGGGCGCTGAGTTTGACTCCCTG-------ACAATCTGTGCTCGGAGCATCCTGTTCCCCAGGGGC-TTCAGGGCTGGACGTGGCCTGTACGGCCGCTTGGCTCCGCGGCAGCCG---------------------------------------------CTTCACTTCCTCAGCCAGGATTTTAATTCCTCCTGCTGGAAACT-GGGTCCATGCACTTGGCTTGAATATGTTGATTTGTCAAAATTACCATTTCCTGGGGCTGCTCACATCAG-AAGCAGCAGGTGG-TCTTTCGTGTGCTT i nomLeu3.chr24 I 2 M 147 s rheMac3.chr1 33415690 347 + 229590362 GGGActgccactaactcatgctgtgtgaccttgggca--agcact-----------cctttgcctccactggcctca-----gttttctcatctgtaaaatgGTCTTTCACGGGACCAGGGCACTGAGTTTGACTGCTCG-------GCTACCTGTGCTCAGAGCATCCCGTTCCCCAGGGGC-TTCAGGGCTGGACGTGGCCTGCACGGCCACTTGGCTCTGCAGCAGCTG---------------------------------------------CTTCACTTCCTCAGCCAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCATTTGGCCTGAATAAGTTGATTTGTCGAAATTACTATTTCCTGAGGCTGCTCACATCGG-AAGCAGCAGGTGGTTCTCCCGTGTGCTT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29927272 347 - 227556264 GGGActgccactaactcatggtgtgtgaccttgggca--agcact-----------cctttgcctccactggcctca-----gttttctcatctgtaaaatgGTCTTTCACGGGACCAGGGCACTGAGTTTGACTGCTCG-------GCTACCTGTGCTCAGAGCATCCCGTTCCCCAGGGGC-TTCAGGGCTGGACGTGGCCTGCACGGCCACTTGGCTCTGCAGCAGCTG---------------------------------------------CTTCACTTCCTCAGCCAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCATTTGGCCTGAATAAGTTGATTTGTCGAAATTACTATTTCCTGAGGCTGCTCACATCGG-AAGCAGCAGGTGGTTCTCCCGTGTGCTT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32690443 347 + 220367699 GGGACTGCCACTAACTCatggtgtgtgaccttgggca--agcacT-----------CCTTTGCCTCcactggcctca-----gttttctcatctgtaaaatggtctTTCACGGGACCAGGGCACTGAGTTTGACTGCTCG-------GCTACCTGTGCTCAGAGCATCCCGTTCCCCAGGGGC-TTCAGGGCTAGACGTGGCCTGCACGGCCACTTGGCTCTGCAGCAGCTG---------------------------------------------CTTCACTTCCTCAGCCAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCATTTGGCCTGAATAAGTTGATTTGTCGAAATTACTATTTCCTGAGGCTGCTCACATCGG-AAGCAGCAGGTGGTTCTCCCGTGTGCTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28206827 347 - 130588469 GGGActgccactaactcatggtgtgtgaccttgggca--agcact-----------cctttgcctccactggcctca-----gttttctcatctgtaaaatgGTCTTTCACGGGACCAGGGCACTGAGTTTGACTCCTCG-------GCTACCTGTGCTCAGAGCGTCCCGTTCCCCAGGGGC-TTCAGGGCTGGACGTGGCCTGCACGGCCACTTGGCTCTGCAGCAGCTG---------------------------------------------CTTCACTTCCTCAGCCAGGATTGTAATTCCTCCTGCTGGAAACT-GGGTCCATGCGTTTGGCCTGAATAAGGTGATTTGTCGAAATTACTATTTCCTGAGGCTGCTCACATCGG-AAGCAGCAGGTGGTTCTTCCGTGTGCTT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64671363 346 + 155834243 aggtctgccactggctcagtgtgtgtgaccttgggtg--cgtgct-----------cctttgcctcgacaggcctca-----gttttctaagctgtaaaatggTCTTTCATGGGACCAGTGTGCTGAGTTTGACTCCCCA-------GCAATCTGTGCTCGGAGGGTCCCATTTCCCAGGGGC-TTCAGGGCTGGACGTGGTCTGCATGGCCACATGGCTCCACTGCAGCAG---------------------------------------------CTTCACTTCCTCAGCAAGGAGTTTAATTCTTCCTGCTGGAAACC--GGTCCATGTGTTTGGCCCGAATAAGGTGATTTGTCAAAATTACCATTACCTGGGGCTGCTCACATTGG-AAGCAGCAGGTGGTTCTTCCATGTGCTT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15019137 361 - 85426708 -----tgccactgcctcagggtgtgtgactttgggcagcaacaccccccaccaccacctttgcctccatgggccttg-----gttttcttgtccataaa---GCCTCTCATGGGACCAGGTAGCTGGGTCTGTGTCGTCGCTGGCATTCTGGATGTGCCCTGAGCATCCCGTTCCCCCGGGGCTTTCAAAGCTGGACCTGGTCAGCACAACTGCCTGGCTTGACAGCAACAG---------------------------------------------CTTCACTTCCCCAGCCATGATTTTAATTCCTCCTGCTGGAAACTTGGCTCCGTGCACTTGGGCTGAATAAGTTGATTTGTAGACATTATCATTTCCTGGGGCTGCTCGCATCAG-AAGCAGCAGGTAGGTGCTCCGTGTGCTT i canFam3.chr2 C 0 C 0 a score=648459.000000 s hg38.chr1_KI270760v1_alt 99450 240 + 109528 CAGAAGGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGCGACATCTGCTGGAAGGCAGCACTGAATTATGTCGCATTATAACAGCATTTCACTCGGTTCCTGTGACCTTTGTTTAGCCAGAGCCAGAATCTCCTGCCGAGGGGCCTGCTCCCCTGTCTGGGGACTTTTCCTGGGCTGCACCAGGCAGA----------------CTGCATCATAGCGGGTAGGACAGGGGTCCACGACAGGGTGAAG s panTro4.chr1 30530149 239 + 228333871 CAGAAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGCGACATCTGCTGGAAGGCAGCACTGAATTATGTCGCATTGTAACAGCATT-CACTCGGTTCCTGTGACCTTTATTTAGCCAGAGCTGGAATCTCCTGCCGAGGGGCCCGCTCCCCTGTCTGGGGACTTTTCCTGGCCTGCACCAGGCAGA----------------CTGCATCATAGGGGGTAGGACAGGGGTCCACGACAGGGTGAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30119739 240 - 229942017 CAGGAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGAGACATCTGCTGGAAGGCAGCACTGAATTATGTCGAATTATAACAGCATTTCACTCGTTTCCTGTGACATTTATTTAGCCAGAGCCAGAATCTCCTGCTGAGGGGCCCACTCCCCTGTCTGGGGACTTTTCCTGGGCTGCACCAGGCAGA----------------CTGCATCATAGGGGGTAAGACAGGGGTCCACATCAGGGTGAAG i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33416037 240 + 229590362 CAGAAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGCAACATCTGCTGGAAGGCAGCACTGAATTACGTCGCATTATAACAGCATTTCACTCGGTTCCTGTGACCTTCATTTAGCCAGAGCCAGAATCTCCTGCTGAGACGCCCACTCCCGTGTCTGGAGACTTTTCCTGGCCTGCACCAGGCAGA----------------CTGCATCATAGCGGGTAGGACAGGGGTCCATGACAGGGTGAGG i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29927619 240 - 227556264 CAGAAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGCAACATCTGCTGGAAGGCAGCACTGAATTACGTCGCATTATAACAGCATTTCACTCGGTTCCTGTGACCTTCATTTAGCCAGAACCAGAATCTCCTGCTGAGACGCCCACTCCCGTGTCTGGGGACTTTTCCTGGCCTGCACCAGGCAGA----------------CTGCATCATAGCGGGTAGGACAGGGGTCCACGACAGGGTGAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32690790 240 + 220367699 CAGAAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAAGCAACATCTGCTGGAAGGCAGCACTGAATTACATCACATTATAACAGCATTTCACTCGGTTCCTGTGACCTTCATTTAGCCAGAACCAGAATCTCCTGCTGAGACGCCCACTCCCGTGTCTGGGGACTTTTCCTGGCCTACACCAGGCAGA----------------CTGCATCATAGTGGGTAGGACAGGGGTCCACGACAGGGTGAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28207174 240 - 130588469 CAGAAAGCGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCTGAAGCAACATCTGCTGGAAGGCAGCACTGAATTACATTGCATTATAACAACATTTCACTCAGTTCCTGTGACCTTCATTTAGCCAGACCCAGAATCTCCTGCTGAGACGCCCACTCCCACGTCTGGGGACTTTTCCTGGCCTGCACCAGGCAGA----------------CTGCCTCATAGTGGGTAGGACAGGGGTCCATGACAGGGTGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64671709 238 + 155834243 CAGAAAGAGCCCCAGAGTCCAGCTGGGACAAATCCATCCCTCCAAACCAACATCTGCTGGAAGGCAGCACTGAATTGTGTCACATTATAACAGCATTTCGCTCAGTTCCTGTGACCTTCATTTAGCCAGAGCTAGAATCT-CTGCCGAGGGGCACACTTCCCTGTC-AGGGACTTTTCCTGGGCTGCACCAGGCAGA----------------TTGCATCACAGGGAGTAGGACGGGGATCAATGGCAGGGTGAAG i calJac3.chr7 C 0 C 0 s canFam3.chr2 15019498 248 - 85426708 CTGAATGAGCCCCGGAGTCCAGCTGGG-CAAATCTATCCCTCCAAAGCGACATCTGCTGGAAGGTGGCCTTGAATTATGTCACATCATAAAAGCATTTCATTAGGTTCCAGTAAACTTTATTTAACTGGAGGCCAGATCTCCCCTCGAAAGGCCTACTTCCCCGTCTGGGAACTTTTCCTGG-------CAGGAAGGTGGAGGGGGGAGCCCCCTGTGTTATAGAGGACAGAATGGGTGATGACGGCAGAGTGAGG i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 563693 147 - 28733288 M a score=576612.000000 s hg38.chr1_KI270760v1_alt 99690 211 + 109528 -GGTTCTGGGCCAGGCGGGGGTGGGCAGAGATAGGCCCCC-TGATGGAG---------AGGAGAAGTCGGGGTTGAGAGGACCACATCCATGGGACAATTTGCTTCACAGGGCTGGTCACCCAGTGTGGGTGGTCCTGGAGGCTCCTGTCCCC-----TTCACCCATTCCCTTTC--------tcactcagcaaacatttcttggccactgatgtactggggtgacgtgccaggt s panTro4.chr1 30530388 211 + 228333871 -GGTTCTGGGCCAGGCAGGGGTGGGCAGAGATAGGCCCCC-TGATGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACATCCATGGGACAATTTGCTTCACAGGGCTGGTCACCCAGTGTGGGTGGTCCTGGAGACTCCTGTCCCC-----TTCACCCATTCCTTTTC--------tcactcagcaaacatttcttggccactgatgtactggggtgacgtgccaggt i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30119979 219 - 229942017 -GGCTCTGGGCCAGGCATGGGCAGGCAGGGATAGGCCCCC--GATGGGGTTCTCCTATAGGAGAAGGCGGGGTTGAGAGGACCACACCCATGGGACAATTTGCTTCACAGGGCTGGTCACCCAGTGTGGGTGGTCCTGGAGACTCCTCTCCCC-----TTCACCCATTCCCTTTC--------tcactcagcaaacatttctgggccactgatgtaccagggtgacctgccaggt i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 563840 212 - 28733288 -GACTCTGGGCCAGGTGGGGGTGGGCAGGGATAGGCCCCCTTGACGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACATCCATGGGACAGTTCTCTCCGCAGGGCTGGTTGCCCACCATGGGTGGCCCTGGAGACTCCCATCCCC-----TTCATCCATTCCCCTTC--------tcactcagtaaacatttcttggtcactgatgtgccggggtcacgtgccaggt i nomLeu3.chr24 M 147 C 0 s rheMac3.chr1 33416277 199 + 229590362 -GGCTCTGGGCCAGGCAGGAGCAGGCAGG-------------GATGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACACCCATGGGACAATTCGCTTCACAGGGCTAGTCACTCAGCGTGGGTGGTCCTGGAGACTCCTGTCCCC-----TTCACCCATTCCCTTTC--------tcactcagcaaacatttcttggccactgatgtaccagggtgacataccaggt i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29927859 199 - 227556264 -GGCTCTGGGCCAGGCAGGAGCAGGCAGG-------------GATGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACACCCATGGGACAATTCGCTTCACAGGGCTAGTCACCCAGCGTGGGTGGTCCTGGAGACTCCTGTCCCC-----TTCACCCATTCCCTTTC--------tcactcagcaaacatttcttggccactgatgtaccagggtgacataccaggt i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32691030 199 + 220367699 -GGCTCTGGGCCAGGCAGGAGCAGGCAGG-------------GATGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACACCCATGGGACAATTCGCTTCACAGGGCTAGTCACCCAGCGTGGGTGGTCCTGGAGACTCCTGTCCCC-----TTCACCCATTCCCTTTc--------tcactcagcaaacatttcttGGCCACTGATGTACCAGGGTGACATACCAGGT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28207414 173 - 130588469 -GGCTCTGGGCCAGGCAGGATCAGGCAGG-------------GATGGAG---------AGGAGAAGGCGGGGTTGAGAGGACCACACCCATGGGACAATTCGCTTCAC--------------------------CCTGGAGACTCCTGTCCCC-----TTCACCCATTCCCTTTC--------tcactcagcaaacatttcatggccactgatgtaccagggtgacataccaggt i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64671947 199 + 155834243 -GGCTCTGGCCCAGGCAGTGGTGGATG---------CCCT--GATGGAG---------AGGAAAAGGT-GGGTTGAGAGGACCACA-CCATGGGACAGTTCGCTTCGCAGGGCCAGTTACCCAGCATGGGTGGCCCTGGAAACTCCTGTCCCC-----TTCACCAATTCCCTTTC--------tcactcaggaaacatttcctggccactgatgtgccatggtgacatgccgggt i calJac3.chr7 C 0 C 0 s canFam3.chr2 15019746 210 - 85426708 GGCCTCGGAGCCAGGGCTGGG--GACAGGGATCGGCCCCC-TGATGGAA---------GAGAAGAGGC-TGGCTGAGAAGGCCACACCGATGGGATGAGTAGCCT----------GTCATCTAGTGTAGGC-ACCCTGGAGATTGCTTGTGACGGGTAGGCACCTATCCACTTTCTCACACAGTCACTCAACAAACACTTGCTGGCCAGGGATGGGCTGAGG-AATGTGCCAGGT i canFam3.chr2 C 0 I 1964 a score=1141957.000000 s hg38.chr1_KI270760v1_alt 99901 441 + 109528 taaggagacacagagatggggaagagcttgcctttacctcggggactcacagtctggaacaaaaggcagaAACTCTCCATCAAGAAACAAAAACAGACATCAGGGAACAGGAGGAGGGAGCAGTTAACTCCCTCCAGAGTTAGAGGGGCAGGCGTGtgtcttagggcagctgc-------c------------------------------------------------------------------------------ttaaaagcagggcctgagtcaagggccccggtgctggcagtttatctgagagggga-ccctaggagcacacatgaggaaatggggcaactgaggcaaggcagggagaaaagtcaaggaagcgtgtattagg-aatgggttacagtgacagcaactgcggggctcagtcccgctggggagcct-ctgaggcctgagtggaagatgccccagag-CCACCTTCCTG-----------TGTGGGCACTAACCATCACCTCTTGAGGCATTAACTCTTCCTGTCCC s panTro4.chr1 30530599 440 + 228333871 taaggagacacagagattgggaagagcttgcttttacctcgggaactcacagtctggagcaaaaggcagaaactctccatcaagaaacaataacaaACATCAGGGAACAGGAGGAGGGAGCAGTTAACTCCCTCCAGAGTTAGAGGGGCAGGTGTGtgtcttagggcagctgc--------------------------------------------------------------------------------------ttaaaagcagggcctgagtcaagggccccggtgctggcagtttatctgagagggga-ccctaggagcacacatgaggaaatggggcgactgaggcaaggcagggagaaaagtcaaggaagcgtgtattaag-aatgggttacagcgacagcaactgcggggctcagtcccactggggagcct-ctgaggcctgagtggaagatgccccagag-CCACCTTCCTG-----------TGTGGGCACTAACCATCACCTCTTGAGGCATTAACTCCTCCTGTCCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30120198 440 - 229942017 taaggagacacagagatggggaagagcttgcctttacctcagggactcacagtctggaacaaaaggcagaaactctccatcaagaaacaataacaGACATCAGGGAACAGGAGGAGGGAGCAGTTAACTCCCTCCAGAGTTAGAGGGGCAGACATGtgtcttagggcagctac-------c------------------------------------------------------------------------------ttaaaagcagggcctgagtcaagggcccc-gtgctgtcagtttatgtgagagggga-cactaggagcacacatgaggaaatggggtgactgaggtaaggcagggagaaaagtcaaggaagcgtgtattagg-aatgggctacagcgacagcaactgcggggctcagtcccactggggagcct-ctgaggcctgagtggaagatgccccagag-CCACCTTCCTG-----------TGTGGGCACTAACCATCACCTCTTGAGGCATTAACTCCTCCTGTCCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 564052 532 - 28733288 taaggggacacagaggtggggaagagcttgcctttatctcagagactcacagtctggaacaagagacacaaactctgcgtcaagaaacagtaacaGACATCAGGGAACAGGAGGAGGGAGCAGTTAACTCCCTCCAGGGTTAGGGAGGCAGGGGTGTGTCTCAGGGGGGCGGC-------CCCAAAGGGTGCTCTTTTTGAAGCACATGGAGGAACCACCTGCTGCTTCCAATGTGAGCAACCCCAGGAAATGGTAATTTCAACAGCTTGccctgagtcaagggccccagtgctgatagtttatctgagaggggatccctctcagataaagtgtggaaacggtgcaactaagg-ggggaaaagagaaaagtcagtgaagcgtgaactaagcagtgggttacagcgacggcagcttcggggctcagtcctgctggggagcct-ctgaggcctgcgtggaagacgccccagagtccactctcatgactcaaagggcagtgggcactgttcaccacctctcgaggcattaactcctcctgtccc i nomLeu3.chr24 C 0 I 1366 s rheMac3.chr1 33416476 429 + 229590362 taaggagacacagagatggggaagagcttgcctttacctcagggactcacagtctggaacaagaggcagaaactcgccatcaagaaacaataacaGACATCAAAGAACAGGAGGAGGGAGCAGTTAACTCCTTCCAGAGTTAGGGGGACAGGCGGGtgtctcagggcagctgc-------c------------------------------------------------------------------------------ctaaaagcaggagctgagtcaagggccccggtgctggccgtttatctgggagggta-ccccaggagcacacatgaggaaatggggtgactgaggcaaggcagggagaaaagtcaatgcagtatgtattagg-ggtgggttacagcaacagcagctgcggggctcagtcctgctggggagactgctgggG-------------TGCCCCAGAG-CCACCTTCCTG-----------TGTGAGCACTAACCACCACCTCTTGAGACATTAACTCCTCCTGTCCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29928058 429 - 227556264 taaggagacacagagatggggaagagcttgcctttacctcagggactcacagtctggaacaagaggcagaaactcgccatcaagaaacaataacaGACATCAAAGAACAGGAGGAGGGAGCAGTTAACTCCTTCCAGAGTTAGGGGGACAGGCGGGTGTCTCAGGGCAGCTGc-------c------------------------------------------------------------------------------ctaaaagcaggagctgagtcaagggccccggtgctggccgtttatctgggagggta-ccccaggagcacacatgaggaaatggggtgactgaggcaaggcagggagaaaagtcaatgcagtatgtattagg-ggtgggttacagcaacagcagctgcggggctcagtcctgctggggagactgctgggG-------------TGCCCCAGAG-CCACCTTCCTG-----------TGTGAGCACTAACCACCACCTCTTGAGACATTAACTCCTCCTGTCCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32691229 429 + 220367699 TAAGGAGACACAGAGATGGGGAAGAGCTTGCCTTTACCTCGAGGACTCACAGTCTGGAACAAGAGGCAGAAACTCGCCATCAAGAAACAATAACAGACATCAAAGAACAGGAGAAGGGAGCAGTTAACTCCTTCCAGAGTTAGGGGTACAGGCGGGTGTCTCAGGGCAGCTGC-------C------------------------------------------------------------------------------CTAAAAGCAGGAGCTGAGTCAAGGGCCCCGGTGCTGGCCGTTTATCTGGGAGGGTA-CCCCAGGAGCACACATGAGGAAATGGGGTGACTGAGGCAAGGCAGGGAGAAAAGTCAATGCAGTCTGTATTAGG-GATGGGTTACAGCAACAGCAGCTGCGGGGCTCAGTCCTGCTGGGGAGACTGCTGGGG-------------TGCCCCAGAG-CCACCTTCCTG-----------TGTGAGCACTAACCACCACCTCTTGAGACATTAACTCCTCCTGTCCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28207587 429 - 130588469 taaggagacacagagatggggaagagctgggctttacctcgaggactcacagtctggaacaagaggcagaaactctccatcaagaaacaataacaGACATCAAAGAACAGGAGGAGGGAGCAGTTAACTCCTTCCAGAGTTAGGGGGACAGGCGTGTGTCTCAGGGCAGCTAC-------C------------------------------------------------------------------------------CTAAAAGCAGGAGCTGAGTCAAGGGCCCCGGTGCTGGCAGTTTATCTGGAAGGGTA-CCCCAGGAGCACACATGAGGAAATGGGGTGACTGAGGCAAGGCAGGGAAAAAAGTCAATGCAGCGTGTATTAGG-AGTGGGTTACAGCGACAGCAGCTGCGGGGCTCAGTCCTGCTGAGGAGACTGCTGGGG-------------TGCCCCAGAG-CCACCTTCCTG-----------TGTGAACACTAACCACCACCTCTTGAGACATTAACTCCTCCTGTCCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64672146 445 + 155834243 aaaagggacagagagatggggaagagcttgcctttacctcggggactcacagtctggaacaagagacagaaactctgcagcaagagaaaataacaggcatcgggtagcaggaggtgggggCAGTTAGCTCCCTCCAGGGTTAG-GGGCCAAGCATGTGTCTCAGGGTGGCTGAGTCAAGGc------------------------------------------------------------------------------ccaaaagcaggccctgagtcaagggccccagtgctggtggtttatctgagcgggga-ccccaggagcacacatgaggaaactgagtgactgaggggaggcagggagaaaagtcagcaaagcgtatattagg-agtgggttacagcaacagcagctgctgggct--gtcctgctggggaacct-ctgaggcctacgtggacgatgctccccag-CCACCTTCTGG-----------CATGGGCACTGACCACCACCTCCGGAGGCATTAACTCCTCCTGACCC i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I a score=2069032.000000 s hg38.chr1_KI270760v1_alt 100342 912 + 109528 TGCACCTGCCCTTGCACTTCCAGGAACAGTGTGTGGAAGGGAGGGGAGAAAACGGAAATGGTCCCAGGGACCAAGGAGATTACATGGGGGAAAGTTGAGCAGGTTGGATGCAGAGAAGCCTTGGTTGGCGGAGTTGGGTGAGCTAACGCAGTAGGAGAGAGCTGAGCACGtatatatatatatatatTTTTTTTTTTTT--ACCAGTACATGGAGCCAGAACTCCAGAGATGTGGATGTGGATGGAACCCTACAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGAGAGGGTGGACTTTGCTACGAAATGGCTGAGAACAGGTAGATGGGCTGTTCCATAGAAGGAAGAGAAGGATGTGTGTGCCTCATGGCCTCTACTTCCC-AACAGGAAGAAAGTCAGACCATTTGCTGGGAGCAAATGCTGACTGGTGACTGGACAGGGGCCATGAAGAGGGCTTAGGCCTGAAGCAGCATTTGAAGTGTAGGGC------AGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGACAGTGCTGGTGCCAGACTCAGCATACAGCTTGGCAGCATTGTGGTCATTACGGGCAGCCCCTCCACATCTCAGGATCAGAGTAGTGGAAGTAAACGGTCACTTTGGTCCTTTGCTGAGTTTGGCAGGACATGGGTGGCACAAAGAGGACACCAGCCAGTGTGCGTGCCATGGTCCTGGGGCAGAACCTCACCGGCTCCCCATCTCCTCCCCTCCTA-CATTTGGTCCTGGGAAAAGTagagagtaggaagcatggaaaagatcccactgggtgttagggggctgggtcttaaaatagccctgcagctctcttgctgaataaccttggataagtcactttccctttctgggcctgtttccatacccattcattgg s panTro4.chr1 30531039 914 + 228333871 TGCACCTGCCCTTGCACTTCCAGGAACAGTGTGTGGAAGGGAGGGGAGAAAACGGAAATGGTCCCAGGGACCAGGGAGATTACATGGGGGAAAGTTGAGCAGGTTGGATGCAGAGAAGCCTTGGTTGGCGGAGTTGGGTGAGCTAACGCAATAGGAGAGAGCTGAGCACATAtttttttttttttttttttttttttttttACCAATACATGGAGCCAGAACTCCAGAGATGTGGATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCTACGAAATGGCTGAGAACAGGTAGATAGGCTGTTCCACAGAAGGAAGAGAAGGATGTGTGTGCCTCATGGTCTCTACTTCCC-AACAGGAAGAAAGTCAGACCATTTGCTGGGAGCAAATGCTGACTGGTGACTGGACAGGGGCCATGAAGAGGGCCTAGGCCTGAAGCAGCATTTGAAGCATAGGGC------AGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGAGGGACAGTGCTGGTGCCAGACTCAGCATACAGCTTGGCAGCATTGTGGTCATTACGGGCAGCCCCTCCACATCTCAGGACCAGAGTAGTGGAAGTAAACGGTCACTTTGGTCCTTTGCTGAGCTTGGCGGGACATGGGTGGCACAAAGAGGACACCAGCCAGTGTGCACGCCATGGTCCTGGGGCAGAACCCCACCGGCTCCCCATCTCCTCCCCTCCTA-CATTTGGTCCTGGGAAAAGTagagagtaggaagcatggaaaagatcccactgggtgttagggggctgggtcttaaaatagccctgcagctctcttgctgaataaccttggataagtcactttccctttctgggcctgtttccatacccattcattgg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30120638 902 - 229942017 TGCACCTGCCCTTGCACTTCCAGGAACAGTGTGTGGAAGGGAGGGGAGAAAACAGAAATGGTCCCAGGGACCAGGGAGATTACATGTGGGAAAGTTGAGCAGTTTGGATGCAGAGAAGCCTTGGCTGGCGGAGTTGGGAGAGCTAACGCAATAGGAGAGAGCTGAGCACata--------ttttttttttttttttttt--aCCAATACATGGAGCCAGAACTCCAGAGATGTGAATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAGGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCTACGAAATGGCTGAGAACAGGTAGATGTGCTGTTCCATAGAAGGAAGAGAAGGATGTGTGTGCCTCATGGCCTCTACTTCCC-AACAGGAAGAAAGTCAGACCATTTGCTGGGAGCAAATGCTGACTGGTGACTGGACAGGGGCCGTGAAGAGGGCCTAGGCCTGAAGCAGCATTTGAAGTGTAGGGC------AGTGGGTATGGACCGCAGGAAGGTT--GGGGGGGATGGACAGTGCTGGTGCCAGACTCAGCATACAGCTTGGCAGCATTGTGGTCATTACGGGCAGCCCCTCCACGTCTCAGGACAAGAGTAGTGGAAGTAAACGGTCACTTTGGTCCTTTGCTGAGCTTGGCAGGACATGGGTGGCACAAAGAGGACAGCAGCCAGTGTGCATGCCATGGTCCTGGGGCAGAACCTCACCGGCTCCCCATCTCCTCCCCTCCTA-CTTTTGGTCCTGGGAAAAATagagagtaagaagcatggaaaagatcccactgggtgttaggggactgggtcttaaaatagccctgcagctctcttgctgaataaccttgggtaagtcactttccctttctgggcctgtttccatacccattcattgg i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33416905 901 + 229590362 TGCACCTGCCCTTGCACTTCCGGGAACAGTGTGTGGAAGGGAGGGGAGAAAATGGAAATGGTCCCAGGGACCAGGGAGATTACATGGGGGAAAGTTGAGCATGTTGGATGCAGAGAAGCCTTGGCTGGTAGAGTTGGGTGAGCTAACGCAATAGGAGAGAGCTGAGCACACA------------------TTTTTTTTT--ACCAATACATGGAGCCAGAACTCCAGAGATGTGGATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCCACAAAACGGCTGAGAACAGGTAAATGTGCCCTTCCATAGAAGGAAGAGAAGGATGTGTGTGCCTCATGGCCTCTACTTCCCAAACAGGGAGAAAGTCGGACCATTTTCTGGGAGCAAATGGTGACTGGTGACTGGATAGGGGCCATGAAGAGGGCCCAGGCCTGAAGCAGCATTTGAAGTGTAGAGCAGTGGGAGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGACGGTACTGGTGCCAGACTTGGCATACAGCTTAGCAGCATTGTTGTCATTACGGGCAGCCCCTCCATGTCTCAGGACCAGAGTAGTGAAAGTCAATGGTCACTTTGGTCCTTTGCTGAGCTTGGCAGTACATGGGTGGCACAAAGAGGACACCAGCCAGTGTGCATGCCATGGTCCTGGGGCAGAACCTCGCCGGCTCCCCATCTCCTCCCCTCCTA-CTTTTAGTCCTGGTTAAAGTaaggagtaggaggcatggaaaagatctcactgggtgttaggggactggctcttgaaatagccctgcagttcacttgctgaataaccttgggcaagtcactttccctctctgggcctgtttccatacccgttcattga i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29928487 901 - 227556264 TGCACCTGCCCTTGCACTTCCGGGAACAGTGTGTGGAAGGGAGGGGAGAAAATGGAAATGGTCCCAGGGACCAGGGAGATTACATGGGGGAAAGTTGAGCATGTTGGATGCAGAGAAGCCTTGGCTGGTAGAGTTGGGTGAGCTAACGCAATAGGAGAGAGCTGAGCACACA------------------TTTTTTTTT--ACCAATACATGGAGCCAGAACTCCAGAGATGCGGATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCCACAAAACGGCTGAGAACAGGTAAATGTGCCCTTCCATAGAAGGAAGAGAAGGATGTGTGTGCCTCGTGGCCTCTACTTCCCAAACAGGGAGAAAGTCGGACCATTTTCTGGGAGCAAATGGTGACTGGTGACTGGACAGGGGCCATGAAGAGGGCCCAGGCCTGAAGCAGCATTTGAAGTGTAGAGCAGTGGGAGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGACGGTACTGGTGCCAGACTTGGCATACAGTTTAGCAGCATTGTTGTCCTTACGGGCAGCCCCTCCATGTCTCAGGACCAGAGTAGTGAAAGTCAATGGTCACTTTGGTCCTTTACTGAGCTTGGCAGTACATGGGTGGCACAAAGAGGACACCAGCCAGTGTGCATGCCATGGTCCTGGGGCAGAACCTCGCCGGCTCCCCATCTCCTCCCCTCCTA-CTTTTAGTCCTGGTTAAAGTaaggagtaggaggcatggaaaagatctcactgggtgttaggggactggctcttgaaatagccctgcagttcacttgctgaataaccttgggcaagtcactttccctctctgggcctgtttccatacccgttcattga i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32691658 901 + 220367699 TGCACCTGCCCTTGCACTTCCGGGAACAGTGtgtggaagggaggagagaaaacgGAAACGGTCCCAGGGACCAGGGAGATTACATGGGGGAAAGTTGAGCATGTTGGATGCAGAGAAGCCTTGGCTGGTAGAGTTGGGTGAGCTAACGCAATAGGAGAGAGCTgagcacaca------------------ttttttttt--acccATACATGGAGCCAGAACTCCAGAGATGCGGATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCCACAAAATGGCTGAGAACAGGTAAATATGCCCTTCcatagaaggaagagaaggatgtGTGTGCCTCATGGCCTCTACTTCCCAAACAGGGAGAAAGTCGGACTATTTTCTGGGAGCAAATGGTGACTGGTGACTGGACAGGGGCCATGAAGAGGGCCCAGGCCTGAAGCAGCATTTGAAGTGTAGAGCAGTGGGAGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGACGGTACTGGTGCCAGACTTGGCATACAGCTTAGCAGCATTGTTGTCATTACGGGCAGCCCCTCCATGTCTCAGGACCAGAGTAGTGAAAGTCAATGGTCACTTTGGTCCTTTGCTGAGCTTGGCAGGACATGGGTGGCACAAAGAGGACACCAGCCAGTGTGCATGCCATGGTCCTGGGGCAGAACCTCGCTGGCTCCCCATCTCCTCCCCTCCTA-CTTTTAGTCCTGGTTAAAGTAAGGAGTAGGAGGCATGGAAAAGATCTCACTGGGTGTTAGGGGACTGGCTCTTGAAATAGCCCTGCAGTTCACTTGCTgaataaccttgggcaagtcactttccctctctgggcctgtttccatACCCATTCATTGA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28208016 896 - 130588469 TGCACCTGCCCTTGCACTTCCGGGAACAGTGTGTGGAAGGGAGGGAAGAAAACAGAAATGGTCCCAGGGACCAGGGAGATTACATAGCGGAAAGTTGAGCATGTTGGATGCAGAGAAGCCTTGGCTGGTAGAGTTGGGTGAGCTAACGCAATAGGAGAGAGCTGAGCACACA------------------TTTATTTTT--ACCAATACATGGAGCCAGAACTCCAGAGATGCGGATGTGGATGGAACCCTGCAGAGGCAGAGGGAATGGATCCAGGTGGGAAGGTGCCTTCCACTGGGGGAGGGTGGACTTTGCCACAAAATGGCTGAGAACAGGTAAATATGCCCTTCCATAGAAGGAAGAGAAGGATGTGTGTGCCCCATGGTCTCTACTTTCCAAACAGGGAGAAAGTCAGACCATTTGCTGGGAGCAAATGGTGACTGGTGACTGGACAGGGGCCATGAAGAGGGCCCAGGCCTGAAGCAGCATTTGAAGTGTAGAGCAGTGGGAGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGACGGTGCTGGTG-----TGTGGCATACAGCTTAGCAGCATTGTTGTCATTGCGGGCAGCCCCTCCATGTCTCAGGACCAGAGTAGTAAAAGTCAATGGTCACTTTGGTCCTTTGCCGAGCTTGGCAGGACATGGGTGGCACAAAGAGGACACCAGTCAGTGTGCATGCCATGGTCCTGGGGCAGAACCTCGCAGGCTCCCCATCTCCTCCCCTCCTA-CTTTTAGTCCTGGTTAAAGTaaggagtaggaggcatggaaaagatcccactgggtgttaggggactggctcttgaaatagccctgcagttcacttgctgaataaccttgggcaagtcactttccctctctgggcctgtttccatacccattcattga i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64672591 883 + 155834243 -GTGCCTGCCTTTGCACTTTCAGGAACAGCGTGTGGATGGGAGGGGAGGAAACAGAAATTGTCCCAGGGTCTAGGGGGATTACCTGGGAGAAGTTTGAGGGAGTTGGATGCAGAGAAGCCTTGGTTGGTGGACTCGGCTGAGCTCACACAATAGGAGAGAACTGAGCACACA------------------TTTTTTTTA--ACCAACACATGGAGCTGGAACTTCAGAGATGTGGACGTGGATGGACCCCTGCAGAGGCAGAGGAAATGGATCCGGGTGGGAAGATGCCTTCCACTGGGGGAGGGTGGACTCTGCTACTAAATGGCTGAGAACAGGGAGATGTGCTCTTCCATAGAAGGAAGAGAAGGACCTGTGTGGCTCACGGCCTCTACTTCCCAAAC--GGAGAAAGTCAG--------CTCCCAGCAAATGGCGACTGGTGACTGTGCAGGGGCCATGAAGAGGGCCCAGGGCTGAATCCGCCTTTGAAGCACAGGGC------AGTGGGTATGGACCACAGGAAGGTCAGGGGAGGGATGGAGGGTGCTGGTGCCAGACTGAGCATACAGCTTGGCAGAA-TGCGGTCATTACAGGCAGCCCCTCCCCATCTCA-GATCAGAGTAGTGAAAGTCAATGGTCACTTTGGTCCCCTGCTGAGCTTGGCAGGACATGGGTGGTACAAAGAGGACACCAGCCAGTATACATGCCATGGTCCTGGGGCAGGACCTCACCAGCTCCCTACCTCCTCCCCTCCTACCTTTTGGTCCTGGGAGAAGTagggagtaggaggcacggaaaagatcccactgggtgttagaggactggctcttgaaacggccctaccactctcttgctgaataatcttgggcaagtggctttccctctctgggcctgtttccatatctattctttgg i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 564584 1366 - 28733288 I e canFam3.chr2 15019956 1964 - 85426708 I a score=1037412.000000 s hg38.chr1_KI270760v1_alt 101254 440 + 109528 aataatgataagacctacccagccaattacacaag-----gggttcccgtgaaagttacataaaataaCTAAGGTGTTTGTGGATGGAGAGGTCCTTTGGAGGCTGGTTCGAGCAGGGCAGAGGTGAGCAGCTATTTATCACAAAttctcctcctcttcagttttcccatctgtaaaatgtgtaggttggaagctgagctGAGTGTGGACCACAGTCACCCTGATCCTGAGGCCCAGGAAAGACCCTGGTTCTTTCCATGCCAGCAGCCTTGTGACATTTTGCCGTTTTGCGAGATTCTCTCAGAGAATGTGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAACCTCATCCT---CATCTCTACACAAGGA-TGCAAA--TTCACTGGATGGGTCCAAAAGAGGTGGAGGTGAGGAGAGAGGCCAAGATGACAGGAGCATGAGGGG s panTro4.chr1 30531953 440 + 228333871 aataatgataagacctgcccagccagttacacaag-----gggttcccgtgaaagttacgtaaaataaCTAAGGTGTTTGTGGATGGAGAGGTCCTTTGGAGGCTGGTTCAAGCAGGGCAGAGGTGAGCAGCTATTTATCACAAAttctcctcctcttcagttttcccatctgtaaaatgtgtaggttggaagctgagctGAGTGTGGACCACAGTCACCCTGATCCTGAGGCCCAGGAAAGACCCTGGCTCTTTCCATGCCACCAGCCTTGTGACATTTTGCCGTTTTGCGAGATTCTCTCAGAGAATGTGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAACCTCATCCT---CATCTCTGCACAAGGA-TGCAAA--TTCACTGGATGGGTCCAAAAGAGGCAGAGGCGAGGAGAGAGGCCAAGATGACAGGAGCATGAGGGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30121540 440 - 229942017 aataatgataagacctgcccagccagttacacaag-----gggttcccatgaaagttacataaaataaCTAAGGTGTTTGTGGATGGAGAAGTCCTTTGGAGGCTGGTTCGAGCAGGGCAGAGGTGAGCAGCTATTTATCACAAAttctcctcctcttcagttttcccatctgtaaaatgtgcaggttggaagctgagctGAGTGTGGACCACAGTCACCCTGATCCTGAGGCCCAGGAAAGACCCTGGCTCTTTCCATGCCACCAGCCTTGTGACATTTTGCCGTTTTGCGAGATTCTCTCAGAGAATGTATTTAAATGAGAAGTTCCATGATTCCTCAATACTCAACCTCATCCT---CATCTCTGCACAAGGA-TGCAAA--TTCTCTGGATGGGTCCAAAAGAGGCAGAGGCGAGGAGAGAGGCCAAGATGACAGGAGCATGAGGGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 565950 361 - 28733288 AATAATGATAAGATCTATCCAGCCAAGC-CACAAGAAGAAGGGTTGTCACGAGGATCACAGGACATCACGGAAATTGAGGTGG--GGAGAAAGCCTTT-GCCGCTCATTAGAGCAGCTTGGATGGAAGTAGGCATCTGACACAACTTC---------TCACTTTCCCCGCCTGTAaaggacacaggttagaagctgagctgggcctagaacccaggcatcctgattcccagctccagg--------------------------------------ctttggcctttccgcAAGGCATGCTGGGAAGATGC--------------------------------CACATTCTCATCTTCGCCATGTTCGCACAGAAACTGGGAC--TTTCCGAGATGGATCTGAAAGAGGCAGAGGTGAAGAGAAAGGCCAGG-----AGGAGAACAAGGGG i nomLeu3.chr24 I 1366 I 8817 s rheMac3.chr1 33417806 435 + 229590362 aataatgataagacctgcccagccagttgcacat------tgattcccgtgaaagttacataa-ataaCTAAGGTCTTTGTGGATGGAGAAGTCCTTCAGAGGCTGGTTTGAGCAGTGCAGAGGTGAGCAGCTATTTATCACAAATTCTCCTCCTcctcagttttcccatctgtaaaatgcatgggatggaagctgagctGAGCGTGGACCACAGTCACCCTGATCCTGAGGCCGAGGAAAGACCCTGGCTCTTTCCGTGCCACCAGCCTTGTGACATTTTGCCATTTTGTGAGGTTCTCTCACAGAATGCGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAAGCTCATCCT---CATCTCTGCACAAAGA-TGCAAT--TTCTCTGGATGGGTCCAAAAGAGTCAGAGGTGAGGAGAGAGGCC--GATGATGGGAGCATAAGGG- i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29929388 435 - 227556264 aataatgataagacctgcccagccagttgcacat------tgattcccgtgaaagttacataa-ataaCTAAGGTCTTTGTGGATGAAGAAGTCCTTCAGAGGCTGGTTTGAGCAGTGCAGAGGTGAGCAGCTATTTATCACAAATTCTCCTCCTcctcagttttcccatctgtaaaatgcatgggatggaagctgagctGAGCGTGGACCACAGTCACCCTGATCCTGAGGCCGAGGAAAGACCCTGGCTCTTTCCGTGCCACCAGCCTTGTGACATTTTGCCATTTTGTGAGGTTCTCTCACAGAATGCGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAAGCTCATCCT---CATCTCTGCACAAAGA-TGCAAT--TTCTCTGGATGGGTCCAAAAGAGTCAGAGGTGAGGAGAGAGGCC--GATGATGGGAGCATAAGGG- i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32692559 430 + 220367699 AATAATGATAAGACCTGC----CCAGTTGCACAT------TGATTCCCATGAAAGTTCCATAA-ATAACTAAGGTCTTTGTGGATGGAGAAGTCCTTCAGAGGCTGGTTTGAGCAGTGCAGAGGTGAGCAGCT-TTTATCAcaaattctcctcctcctcagttttcccatctgtaaaatgcgtGGGATGGAAGCTGAGCTGAGCGTGGACCACAGTCACCCTGATCCTGAGGCCGAGGAAAGACCCTGGCTCTTTCCGTGCCACCAGCCTTGTGACATTTTGCCATTTTGTGAGGTTCTCTCAGAGAATCTGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAAGCTCATCCT---CATCTCTGCACAAGGA-TGCAAT--TTCTCTGGATGGGTCCAAAAGAGTCAGAGGTGAGGAGAGAGGCC--GATGATGGGAGCATAAGGG- i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28208912 435 - 130588469 aataacgataagacctgcccagccagttgcacat------tgattcccgtgaaagttacataa-ataaCTAAGGTCTTTGTGGATGGAGAAGTCCTTCGGAGGCTGGTTTGAGCAGTGCAGAGGTGAGCAGCTATTTATCACAAATTCTCCTCCTcctcagttttcccatctgtaaaatgcatggtatggaagctgagctGAGCGTGGACCACAGTCACCCTGATCCTGAGGTCGAGGAAAGACCCTGGCTCTTTCCATGCCACCAGCCTTGTGACATTTTGCCATTTTGTGAGGTTCTCTCAGAGAATGTGGTTAAATGAGAAGTTCCATGATTCCTCAATACTCAAGCTCATCCT---CATCTCTGCACAAGGA-TGCAAA--TTCTCCGGATGGGTCCAAAAGAGTCAGAGGTGAGGAGAGAGACC--GATGATGGGAGCATAAAGG- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64673474 440 + 155834243 aacaataataagacctgcctagttagttgcacag------gggttcccatgaaagtgacataaaataatTAAGGTCTTTGGGGATGGAGAAATCCTTTGGAGGCTGGTTCGAGCAGTGCAGAAGTGAGCAGCTATTTATCACAAAttctcctcctcctcagttttcccatctgtaaaatatgtaggttggaagctgaGGTAAGCATGGACCACAGTCA-CCTGAATCCAAGGCCCAGGAAAGATCCTGGCTCTTTCCATGCCACCAGCCTTGTGACATTTTGACATTTTGCAAGGTTCCCTCAGAAATTGTGGTTAAATCAGAGGTTCCATGATTCCTCAATATTCAACCTCATCCT---CATCTGTGCACAAGGA-TGCAAATGTTCCCTGGATGGGTCCGAAAGAGGCATAGGTGAGGAGAGAGGCCAAGATGACACGAGTACAAGGGG i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I a score=306866.000000 s hg38.chr1_KI270760v1_alt 101694 139 + 109528 ACCTGGATCTTTAAAGGACTTTGATGGGGAGAGGTACTCAGAGTTGACCGGAGGACGCGGTGTGGGTTTGGGAGGGAGGGGAAGGGGAAGGGATCCCAGAGCTCAGCAAGGAAAGAGACCCAGGGAGGGGACTCTGTCT s panTro4.chr1 30532393 139 + 228333871 ACCTGGATCTTTAAAGGACCTTGATGGGGAGAGGTACTCAGAGTTGACCAGAGGACGCGGTGTGGGTTTGGGAGGAAGGGGAAGGGGAAGGGATCCCAGAGCTCAGCAAGGAAAGAGACCCAGGGAGGCGACTCTGTCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30121980 139 - 229942017 ACCTGGATTTTTAAAAGACCTTGATGGGGAGAGGTACTCAGAGTTGACCGGAGGACACAGTATGGGTTTGGGAGGAAGGAGAAGGGGAAGGGATCCCAGAGCTCAGCAAGGAAAGAGACCCAGGGAGGGGACTCTGTCT i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33418241 139 + 229590362 ACCTGGATCTTTAAAGGACCTTGATGGGCAGAGGTACTCAGAGTTGACCAGAGGACAGGGTGTGGGTTTGAGAGGAGGGTGTAGGGGAAGGGAGCCCAGAGCTCAGCAGGGAAAGAGACCTAGGGAGAGGACTCTGCCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29929823 139 - 227556264 ACCTGGATCTTTAAAGGACCTTGATGGGCAGAGGTACTCAGAGTTGACCAGAGGACAGGGTGTGGGTTTGAGAGGAGGGTATAGGGGAAGGGAGCCCAGAGCTCAGCAGGGAAAGAGACCTAGGGAGGGGACTCTGCCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32692989 139 + 220367699 ACCTGGATTTTTAAAGGACCTTGATGGGCAGAGGTACTCAGAGTTGACCAGAGGACAGGGTGAGGGTTTGAGAGGAAGGTGTAGGGGAAGGGAGCCCAGAGCTCAGCAGGGAAAGAGACCTAGGAAGGGGACTCTGCCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28209347 139 - 130588469 ACCTGGATCTTTAAAGGGCCTTGATGGGGAGAGGGACTCAGAGTTGACTAGAGGACAGGGTGAGGGTTTGAGAGGAAGGGGTAGGGGAAGGGAGCCCAGAGCTCAGCAAGGAAAGAGACCCAGGGAGGGGACTCTGCCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64673914 133 + 155834243 ACCCGAATCTTTAAAGGACCTTGAGGGGGATGGGTGCTCAGAGTTGACCAGAGGACA------GGGTTAGGGAGGAAGGGGAAGGGGAAGGGAGCTGGGAGCTCAGCAAGGAAAGACACCCTGGAAGGGGACTCTGCCT i calJac3.chr7 C 0 C 0 e nomLeu3.chr24 566311 8817 - 28733288 I e canFam3.chr2 15019956 1964 - 85426708 I a score=59773.000000 s hg38.chr1_KI270760v1_alt 101833 22 + 109528 CCAGCTCTTTTCAAACAGAGAA s panTro4.chr1 30532532 22 + 228333871 CCAGCTCTTTTCAAACAGAGAA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30122119 22 - 229942017 CCAGCTCTTTTCAAATAGAGAA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 575128 22 - 28733288 CCAGCCCTCTTCAAAGAGAGAA i nomLeu3.chr24 I 8817 I 773 s rheMac3.chr1 33418380 22 + 229590362 CTGGTTCTTTTCAAACAGAGAA i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29929962 22 - 227556264 CTGGTTCTTTTCAAACAGAGAA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32693128 22 + 220367699 CCGGTTCTTTTCAAACAGAGAA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28209486 22 - 130588469 CCAGTTCTTTTCAAACAGACAA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64674047 22 + 155834243 CTAGCTCTGTTCAAACAGAGAA i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I a score=867200.000000 s hg38.chr1_KI270760v1_alt 101855 303 + 109528 TGCATCAAATCAAGAGAATAAACACAGCCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACATTTCTGGTCAAGGTTCCTCTTCCCACCCCAGGGAGAGAGTAGGAGGCGAACTTAGACTAGTTTCCTTTTTCTTGAAAGGAGTTCTTAGCTCCCGAGCTCCCGCTAACTCAGGCCACCCTCACAGTGAGAATTCA-CAGACTAGGATGATTGGGCAGTGTTTCATGCCG-------GCCTGCTGCCTGCCAGCCCTGGGCCTGGAGAGGCTGTTGATGGTGAGGCTCGATGGAGGTAAG s panTro4.chr1 30532554 303 + 228333871 TGCATCAAATCAAGAGAATAAACACAGCCCAAGAGAGCCATATTATTCACTTTGAAATGAGCAGAAAATGACATTTCTGGTCAAGGTCCCTCTTCCCACCCCAGGGAGAGAGTAGGAGGTGAACTTAGATGAGTTTCCTTTTTCTTGAATGGAGTTCTCAGCTCCCGAGCTCCCGCTAACTCAGGCCACCCTCACAGTGAGAATTCA-CAGACTAGGATGATCGGGCAGTGTTTCATGCCG-------GCCTGCTGCCTGCCAGCCCTGGGCCTGGAGAGGCTGTTGATGGTGAGGCTCGGTGGAGGTAAG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30122141 304 - 229942017 TGCATTAAATCAAGAGAATAAACACAGGCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACATTTCTGGTCAAGGTCCCTCTTCTCACCCCAGGGAGAGAGTAGGAGGTGAACTTAGACGAGTTTCCTTTTTCTTGAAAGGAGTTCTCAGCTCCCGAGCTCCCGCTAACTCAGGCCATCCTCACAGTGAGAATTCAGCAGACTAGGATGATCGGGCAGTGTTTCATGCCG-------GCCTGCTGCCTGCCAGCCGTGGGCCTGGAGAGGCTGTTGATGGTGAGGCTCAGTGGAGGTAAG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 575923 284 - 28733288 TGCATT-----AAGAGAATAAACACAGCCCAAGACAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACATTTCTAGTCAGGGTCCCTCTTCCCATCCCGGGGAGAGAGTAGGAGGTGAGCTTAGATGAGTTTCCTTTTTCTTGAAAGGCGTTCTCAGCTCCTGCACTCCCGATGACTCAGGCCACCCTCACAGTGAGAATGCAGCAGACTAGGATGATCAGGCAGTGTTTCAAGCCG----------------------GCCCTGGGCCTGGAGCGGCTGTTGATGGTGAGGCACAGTGGAGATGAG i nomLeu3.chr24 I 773 C 0 s rheMac3.chr1 33418402 303 + 229590362 TGCATTAAATCAAGAGAATAAACACAGCCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACGTTTCTGGTCA-GGTCCCTCTTCCCACCCCAGGGAGAGAGTAGGAGGTGAGCTTAGACCAGTTTCCTTTTTCTTGAAAGGAGTTCTTAGCTCCTGCGCTCCCACTGACTCGGGCCACCCTCACTGTGAGAATCCAGCAGGCTAGGATGATCCGGCAGTGTCTCAAGCAG-------GCCCGCCACCTGCCAGCCCTGGGCCTGGAGAGGCTGGTGGTggggggggttgagggggggggg i rheMac3.chr1 C 0 I 25 s macFas5.chr1 29929984 303 - 227556264 TGCATTAAATCAAGAGAATAAACACAGCCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACGTTTCTGGTCA-GGTCCCTCTTCCCACCCCAGGGAGAGAGTAGGAGGTGAGCTTAGACCAGTTTCCTTTTTCTTGAAAGGAGTTCTTAGCTCCTGCGCTCCCACTGACTCGGGCCACCCTCACTGTGAGAATTCAGCAGGCTAGGATGATCCGGCAGTGTTTCAAGCCG-------GCCCGCCGCCTGCCAGCCCTGGGCCTGGAGAGGCTGTTGATGGTGAGGTTCAGTGGAGGTGAG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32693150 303 + 220367699 TGCGTTAAATCAAGAGAATAAACACAGCCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACGTTTCTGGTCA-GGtccctcttcccaccccaggGAGAGAGTAGAAGGTGAGCTTAGAccagtttcctttttcttgaaaGGAGTTCTCAGCTCCTGCGCTCCCGCTGACTCGGGCCACCCTCACTGTGAGAATTCAGCAGGCTAGGATGATCCGGCAGTGTTTCAAGCCG-------GCCCGCCGCCTGCCAgccctgggcctggagaggctgttGATGATGAGGTTCAGTGGAGGTGAG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28209508 303 - 130588469 TGCATTAAATCAAGAGAATAAACACAACCCAAGAGAGCCACATTATTCACTTTGAAATGAGCAGAAAATGACATTTCTGGTCA-GGTCCCTCTTCCCACCCCAGGGAGAGAGTAGGAGGTGAGCTTAGACCAGTTTTCTTTTTCTTGAAAGGAGTTCTCAGCTCCTGCGCTCCCGCTGACTCAGGCCACCCTCACCATGAGAATTCAGCAGACTAGGATGATCCGGCAGTGTTTCAAGCCG-------GCCCGCCGCCTGCCAGCCCTGGGCCTGGAGAGGCTGGTGATGGTGAGGTTCAGTGGAGGTGAG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64674069 311 + 155834243 TGCATTAAACTAAGAGAATAAACACAGCCCAAGAGAGCCACAGTATTCACTTTGAAATGAGCAGAAAATGACATTTCTTGTCAGGCTCCCTCTTCTCACCCCAGGGAGAGAGTAGGAGGTGAGCTTAGTCGAGTTTCCTTTTTCTTGAAAGGCGCTCTCAGCTCCTGCGCTCCCGCTGACTCAGGCCACCCTCATGGTGAGAATTCAGCACACTAGGATGATCGGGCAGTGTTTCACACCAGCCTGCTGCCTGCCGCCTGCCAGCCCTGAGCCTGGAGAGGCTGTTGATGGTGGGACCTGGTGGAGGTGAG i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I a score=87242.000000 s hg38.chr1_KI270760v1_alt 102158 39 + 109528 CCCAGCTATAGCAGGGTTGGGAGAGCAGCCTGGCTGAGG s panTro4.chr1 30532857 39 + 228333871 CCCAGCTATAGCAGGGTTGGGAGAGCAGCCTGGCTGAGG i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30122445 39 - 229942017 CCCAGCTATAACAGGGTTGGGAGAGCAGCCTGGCTGAGG i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 576207 39 - 28733288 CCCGGCTAGAGCAGGGTTGGAAGAACAGCCTGGCTGAGG i nomLeu3.chr24 C 0 C 0 s macFas5.chr1 29930287 39 - 227556264 CCCAGCTAGAGCAGACTTGGGAGAACAGCCTGGCTGAGG i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32693453 39 + 220367699 CCCAGCTAGAGCAGACTTGGGAGAACAGCCTGGCTGAGG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28209811 39 - 130588469 CCCAGCTAGATCAGACTTGGGAGAACAGCCTGGCTGAGG i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64674380 39 + 155834243 CCCAGCTAGAGCAGGGGTGGGAGGGCAGCCTGGCTCAGG i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I e rheMac3.chr1 33418705 25 + 229590362 I a score=1642847.000000 s hg38.chr1_KI270760v1_alt 102197 577 + 109528 GTTGAGAGCAGCCTCAAGCAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcagtcccaagttctagttcagagactgattcttatctagctctgacactgagagctc---------ttcc---------ctgagccttgactttcttgtctgtcaaatgggcttggtgatacccacctctgggggtgctgagaatattagaaaaaa----tgtatTAGGGACAATGCACAGCAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAGGCCC-TCAGACTAAAGTCAGCGCAAAGCCACCAGGCTCAGAAACTAGATGCTTAGGCCAATGGCCTGGGCCCCACTGAGCAATGTCAGCCCCATTGTCTGAGGGATGTTGAACCCAGTGCTGTCCAATTTAGAATACACTCATAGAAAGCACCTAGGTCCACGTCCTTATGGACAGTTCAGGAGACTGAGCCCCagg----tgtttgctcaacgccacatagcatggtggtggccgagccagcattggaaaccatcctcatgacatcaagccatgTGGTCCATCCAAGGACTA s panTro4.chr1 30532896 577 + 228333871 GTTGAGAGCAGCCTCAAGCAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcagtcccaaattctagttcagagactgattcttttctagctctgacattgagagctc---------ttcc---------ctgagccttggctttcttgtctgtcaaatgggcttggtgatacccacctctgggggtgctgagaatattagaaaaaa----tgtatTAGGGACAATGCACAACAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAGGCCC-TCAGATTAAAGTCAGCGCAAAGCCACCGGGCTCAGAAACCAGATGCTTAGGCCAATGGCCTGGGCCCCACTGAGCAATGTCAGCCCCATTGTCTGAGAGATGTTGAACCCAATGCtgtccaatttagaatacactcatagaaagcatgtaggtccacgtccttttggacagttcaggagactgagccccagg----tgtttgctcaatgccacatagcatggtggtggctgagccagcattggaaaccatcctcatgacatcaagccatgTGGTCCATCCAAGGACTA i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30122484 576 - 229942017 GTTGAGAGCAGCCTCAAGCAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggaatgagtcccaagttctagttcagagactgattcttttctagctctgacattgagagctc---------ttcc---------ctgagccttggctttcttgtctgtcaaatgagcttggtgatacccacctctgggggtgctgagaatattagaaaaaa----tgtatTAGGGACAATGCACAACAGTCACTATTGCGATCACCAGGACCAGCCAGGGTAGGGGTGCAGGCCC-TCAGACTAAAGTCAGCACAAAGCCACCGGGCTCAGAAATTAGATGCTTAGGCCAATGGCCTGGGCCCCACTGAGGAATGTCAGCCCCATTGTCTGAGGGATGTTGAACCCAATGCtgtccaatttagaatacactcatagaaagcacctagttccacgtccttatggacagttcaggagactgagccccagg----tgtttgctcaatgccacatagcattgtggtggctgagccagcattggaaaccatcctcatgacatcaagccatgTGGT-CATCCAAGGACTA i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 576246 588 - 28733288 GTTGAGAGCAGCCTCAAGCAGCTGGTGTGGTGCAGGCACAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcaatcccaaattctagtccagagac--aatcttttctagctgtgacattgagagctc---------ttccctcatttctctgagcttcagctttcttgcctgctaaatgggcttggtgatacccacctctcaggatgctggggagatcaggaacaatgtctgtaTTAGGGACAATGCACAGCAGTCACTATTGTGATGACCAGGACCAGCCAGGGTGGGGGTACAGGCCCGTCAGACTAAAGTCAGTGTAAAGCCACCAGCCTCAGACACCAGATGCTTAGGCCAATGGCCTGGGCCCCGCTGAGCGATGTCAGCCCCGTTGTCTGAGGGATGTTGAACCCGATGCtgtcctacttagaatgagctcctgaaaagcacctcgttctgcctccccatggacaaatcaggagactgagccccaga----tgtttgctcaataacacacagcatggtggtagctgagccagcattgaaacccagcctcatgacatcaagccatgTGGT-CATCCAAGGACTA i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33418730 580 + 229590362 GTTGAGAGCAGCCTCAAACAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcagtcccaagttctagtccaaagactgaatctcttctagctctgacattgagagctc---------ttcc---------ctgaggcttggctttcttgtctgtcaaatgggcttggtgatacccacctctgggggtgctgagaatattagaaacag----tgtatTAGGGACAATGCACAACAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAAGTCA-TCAGACTAAAGTCAGCGCAAAGCCACTGGGCTCAGAAACTAGATGCTTAGGCCAATAGCCTGGGCCCCGCTGAGCAATGTCAGCCCTATTGTCTGAGGGATGTTTAACCCAATGCTGTCCTATTTAGAATACATTCAtagaaagcacctagttccacctcctcatggacagttcaggagactgagccccaggtgtttgtttgctcaatgccacacagcatggtggcagctgagccagcattggaatccagcctcatgacattaaaccatgtggt-cATCCAAGGACTA i rheMac3.chr1 I 25 C 0 s macFas5.chr1 29930326 580 - 227556264 GTTGAGAGCAGCCTCAAACAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcagtcccaagttctagtccagagactgaatctcttctagctctgacattgagagctc---------ttcc---------ctgaggcttggctttcttgtctgtcaaatgggcttggtgatacccacctctgggggtgctgagaatattagaaacag----tgtatTAGGGACAATGCACAACAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAAGTCA-TCAGACTAAAGTCAGCGCAAAGCCACTGGGCTCAGAAACTAGATGCTTAGGCCAATAGCCTGGGCCCCGCTGAGCAATGTCAGCCCTATTGTCTGAGGGATGTTTAACCCAATGCTGTCCTATTTAGAATACATTCAtagaaagcacctagttccacctcctcatggacagttcaggagactgagccccaggtgtttgtttgctcaatgccacacagcatggtggcagctgagccagcattggaatccagcctcatgacatcaagccatgTGGT-CATCCAAGGACTA i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32693492 562 + 220367699 GTTGAGAGCAGCCTCAAACAGCTGGTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATGAGCACTGGCTTTGGAGTCAGTCCCAAGTTCTAGTCCAGAGACTGAATCTTTTCTAGCTCTGACACTGAGAGCTC---------TTCC---------CTGAGCCTTGGCTTTCTTGTCTGTCAAATGGGCTTGGTGATACCCACCTCTGGGGGTGCTGAGAATATTAGAAACAG----TGTATTAGGGACAATGCACAACAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAAGTCA-TCAGACTAAAGTCAGCGCAAAGCCACTGGGCTCAGAAACTAGATGCTTAGGCCAATAGCCT--------------AATGTCAGCCCTATTGTCTGAGGGATGTTTAACCCAATGCTGTCCTATTTAGAATACACTCATAGAAAGCACCTAGTTCCACCTCCTCATGGACAGTTCAGGAGACTGAGCCCCAGG----TGTTTGCTCAATGCCACACAGCATGGTGGCAGCTGAGCCAGCATTGGAATCCAGCCTCATGACATCAAGCCATGTGGT-CATCCAATGACTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28209850 576 - 130588469 GTTGAGAGCAGCCTCACGCAGCTGCTGTGGTGCAGGCATAGACTGGCTGTTGTTGCTGAGTTTGCATgagcactggctttggagtcagtcccaagttctagtccagagactgattcttttctagctctgacattgagagctc---------ttcc---------ctgagtcttggctttcttgtctgtcaaatgggctttgtgatacccacctctgggggtgctgagaatattagaaacag----tgtatTAGGGACAATGCACAACAGTCACTATTGTGATCACCAGGACCAGCCAGGGTTGGGGTGCAAGCCC-TCAGACTAAAGTCAGCGCAAAGCCACTGGGCTCAGAAACTAGATGCTTAGGCCAATAGCCTGGGCCCCGCTGAGCAATGTCAGCCCTATTGTCTGAGGGATGTTGAACCCAATGCTGTCCTATTTAGAATACACTCAtagaaagcacctagttccacctcctcatggacagttcaggagactgagccccagc----tgtttgctcaatgccacacagcatggtggcagctgagccagcattggaatccagcctcatgacatcaagccatgTGGT-CATCCAAGGACTA i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64674419 538 + 155834243 -GTCAGAGCAGCCTCAAGCAGCTGCTGTGGTGCAGGCTTCGA----CTCTTATTGCTGAGTTTGCATgagcactggctttggagtcagtctcaagttctagtccagaggctgattctcttctatctctgacatgaagagctctatcctcagttcc---------ctgggccttggctttctcatctgtcaaatgggcttggtgatacccacctctcaggatgctgaaaagattaGGAACAG----TGTACTAGGGACCATGCATAGCAGTCACTATTGTGATCACCAGGACCAGCCAGGGTGGGGGTGCAGGCCCGACAGACCACAGTCAGCCCAGAGGCCC-------------------------------------------CTGAGCAACGTCAGCCCCATTGTCTGCGGGATGTTGACCCCGATGCTTTCCTACTTAGAATACACTCAGagaaagcacctagtcccacctcctcatggacagatcaggagactgagccccaga----tgtttgctcagtgccacacagcatggagacagccaagccagcattggaacccagcctcaggacatcaagccatgTGGT-CATCCGAGGACTA i calJac3.chr7 C 0 C 0 e canFam3.chr2 15019956 1964 - 85426708 I a score=2644631.000000 s hg38.chr1_KI270760v1_alt 102774 879 + 109528 AAAATGATGTGCTTaaaagtataggctttggagccagacagac----ctgagctccagtcccagctctgcaactttcatt-attcaacaaatactcattgaattcctgtcaaatgccaggca-catgtccagtgcaagggacacaagaggacaagacctacatggccctggcctctcactgctcacagtctggt----------gggaacaaatatccagtgaatgaacaagctcatcaaccactgtgagaaagcagtgagggacagaca---cagga---tggg-ccctgaaagagacagggacagtgggtgctggagggccactcagggcattcagggagggcatctcaggaaggggatatcggatctggggactggacaccaggcaggagccaagtatgtggg-actggagaagggtatccaggcaaagagctcggagtgatgggggaagagaaaaagctggagcatgc--aggagcatgcaggagggatgtggccagagacggcagagcgagggcaggcaggcctcagaggtcatggtcaggagcacagtgctcatgggcagagcagtaggaggcccttgagggtttgagcaggggaatgatggggtctggcctgtttttt--caaaggatcacactggttgctgctgttTATATGAC-cttgttggctctctgacctggggcaagttgtttaagctctcaaagcctcagtctcttcgtctgtaaaatggggatgatcacagtacccacctcacaggcatcattggaggctgatgtgtgaaaatct--ggagagcacttagcaatgtgacccatgcat-ttcagtg-caaataaa-ctttgcttTCTCACATCCCCTCGTCCAAAGCCCTCATCC---------------T--CCATCATCTGACTTGAACCTGTTGATCCTGCCT s panTro4.chr1 30533473 877 + 228333871 AAAATGATgtgcttaaaagtatagactttggagccagacagac----ctgagctccagtcccagctctgcaactttcatt-attcaacaaatactcattgaattcctgtcaaatgccaggca-catgtccagtgcaagggacacaagaggacaagacctacatggccctggcctctcgctgctcacagtctggt----------gggaacaaatatccagtgaatgaacaagctcatcacccactgtgagaaagcagtgagggacagaca---cagaa---tggg-ccctgaaagagatagggacagtgggtgctggagggccactcagggcattcagggagggcatctcaggaaggggatatcagatctggggactggacaccaggcaggagccaagtatgcggg-actggagaagggtatccaggcaaagagctcagagtgatgggggaagagaagaagctggagcatgc--aggagcatgcaggagggatgtggccagagacggcagagccagggcaggcaggcctcagaggtcatggtcaggagtgtagtgctcatgggcagagcagtaggaggccctggagggtttgagcaggggaatgatggggtctggcctgtttttt--caaaggatcacactggttgctgctgttTATATGAC-cttgttggctctctgacctggggcaagttgtttaagctctcaaagcctcagtctcctcgtctgtaaaacggggatgatcacagtacccacctcaccggcaacgctggaggctgatatgtgaaaatct--ggagagcacttagcaatgtgacccatgcat-ttcagtgccgaataaa-ctttgcttTCTCACATCCCCTCGTCCAAAGCCCTCA------------------T--CCACCACCTGACTTGAACCTGTTGATCCTGCCT i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30123060 877 - 229942017 AAAATGACGTGCTTaaaagtacaggctttggagccagacagac----ttaagctccagtcccagctctgcaactttcatt-attcaacaaatactcattgaattcctgtcaaatgccaggca-catgaccagtgcaagggacacaagaggacaagacctacatggccctggcctctcgctgct--cagtctggt----------gggaacaaatatccagtgaatgagcaagctcatcacccactgtgagaaagcagtgaggcacagaca---cagga---cggg-ccctgaaagagacagggacagtgggtgctggagggccactcagggcattcagggagggcatctcaggaaggggacatctgatctggggactggacaccaggcaggagcccggtatgcagg-actggagaaggatgtccagggaaagagctcggagtgatgggggaagagaagaagctggagcatgc--aggagcatgcaggagggacgtggacagagagggtggagccaggacaggtgggcctcagaggtcatggtcaggagctcagtgctcatgcacacagcagcaggaggccctggaggctttgagcaggggaatgatggggtctggcctgtttttt--caaaggatcacactggttgctgctgttTGTGTGAC-cttgttggctctctgacctggggcaagttgtttaagctctctaagcctcagtctcctcgtctgaaaaatggggatgatcacagtacccacctcacaggcatcattggaggctgacgtgtgaaaatct--ggagagcacttagcaatgtga-ccatgcat-ttcagtgccgaataaa-ctttgcttTCTCACATCCCCTCGTCCAAAGCCCTCATCC---------------T--CCATCACCTGACTTGAACCTGTTGATCCTGCCT i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 576834 784 - 28733288 AACATTATGTGCTTaagagtataggctttggagccagacagac----ctgagctccagtcccagctctgcaactttcattcattcaacaaatactcgttgagttcttgtcatgtgccaggcaccatgcccagtacaagggacacaggaggacaagacctacatggccctggcctctcgctgctcacagtctggt----------gagaacaaatacccagtgaatgaacaagctcatcacccaccgtgagaaagcagtgaggcacagaca---cagga---cagg-ccctgaaagagacatggacagtgggtgctggagggccactcagggcattcagggagggcatctcagggaggggacatctgatctgggagctggac----------------------------------------------------------------------------------------------------------------gtggacagagacggcggagccaggacaggcgggcctcagaggtcatggtcaggggcgcagtgctcacgcacacagcagcaggaggcactggagggtttgagcaggtgagtgatgggatctggcctgtttttt--caaaggatcacactggttgctgtTGTTTGTGTGAC-cttgttggctctctgacctggggcaagttgcttaagttctctaagcctcagtctcctcatctgtaaaatggcgatgatcccagtgcccacctcacaggtgaaactggacactgacatatgacaatctacagagagcactgagcaatg-------tgcAT-TTCGGTGCTGAATAAAGCTTTGCTTTCTCACATCCCCACGTCCAAAGCCCTCATCCTCTACCGGCTGGCCAT--TCACTGCCTGACTTGAACCTGTTGATCCTGCCG i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33419310 880 + 229590362 AAAATGATGTGCTTaagagtataggctttggagtcagacagac----ctgagctccagccccagctctgcaactttcattcattcaacaaatactcattgagttcttgtcatgtgccaggcaccatgcctagtgcaagggacacaggaggacaagacctccatggccctggcctctcgccgctcacagtctggt----------gggaacaaatacccagtgaatgaacaagctcatcacccactgtgagaaagcaatgagggacagaca---cagga---tggg-ccatgaaagagac-ggggcagtgggtgctggagggccactcagggtattcagggagggcatctcaggaaggggaca-atgatctggggactggacacaaggcaggagccaggtgtgtggt-actggagaagggtatccaggcaaagcgctcggagtgatgggggaagggaagaggctggagcatgc--aggagcgtgcaagagggatgtggccagagagggcggagccagggcaggcgggcctcagaggtcacggtcaggagcgcagtgctcacacgcagagcagtaggaggcactggagggtttgagcatgtgagtgatggggtctggcctgttttct--caaaggatcacactggttgctgctgttTGTATGAC-cttgttggctctctgacctggggcaagttgtttaagctctctgagcctgagtctcctcatctgtaaaatggggatgatcacagtacccacctcacaggcatcactggaggctgctgtgtgacaatct--ggagagcacttagcaatgtgacccgtgtat-ttaagggctgaataaa-ctttgcttTCTCACATCCCCATGTCCAAAGCCCTCATTC---------------T--CCACCATCTGACTTGAACCTGTTGATCCTGCCT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29930906 880 - 227556264 AAAATGATGTGCTTaagagtataggctttggagtcagacagac----ctgagctccagccccagctctgcaactttcattcattcaacaaatactcattgagttcttgtcatgtgccaggcaccatgcccagtgcaagggacacaggaggacaagacctccatggccctggcctctcgccgctcacagtctggt----------gggaacaaatacccagtgaatgaacaagctcatcacccactgtgagaaagcaatgagggacagaca---cagga---tggg-ccctgaaagagac-ggggcagtgggtgctggagggccactcagggtattcagggagggcatctcaggaaggggaca-atgatctggggactggacacaaggcaggagccaggtgtgtggt-actggagaagggtatccaggcaaagcgctcggagtgatgggggaagggaagaggctggagcatgc--aggagcgtgcaagagggatgtggccagagagggcagagccagggcaggcgggcctcagaggtcacggtcaggagcgcagtgctcacacacagagcagtaggaggcactggagggtttgagcatgtgagtgatggggtctggcctgttttct--caaaggatcacactggttgctgctgttTGTATGAC-cttgttggctctctgacctgggtcaagttgtttaagctctctgagcctgagtctcctcatctgtaaaatggggatgatcacagtacccacctcacaggcatcactggaggctgctgtgtgacaatct--ggagagcacttagcaatgtgacccgtgtat-ttaagggctgaataaa-ctttgcttTCTCACATCCCCATGTCCAAAGCCCTCATTC---------------T--CCACCATCTGACTTGAACCTGTTGATCCTGCCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32694054 873 + 220367699 AAAATGATGTGCTTAAGAGTATAGGCTTTGGAGTGAGACAGAC----CTGAgctccagccccagctctgcaacgttcattcattcaacaaatactcattGAGTTCttgtcatgtgccaggcaccatgcccagTGCAAGGGACACAGGAGAACAAGACCTCCATGGCCCTGGCCTCTCGACACTCACAGTCTGGT----------GGGAACAAATACCCAGTGAATGAACAAGCTCATCACCCACTGTGAGAAAGCAATGAGGGACAGACA---CAGGA---TGGG-CCCTGAAAGAGAC-GGGGCAGTGGGTGCTGGAGGGCCACTCAGGGTATTCAGGGAGGGCATCTCAGGAAGGGGACA-ATGATCTGGGGACTGGACACAAGGCAGGAGCCAGGTGTGTGGT-ACTGGAGAAGGGTATCCAGGCAAAGCACTCGGAGTgatgggggaagggaagaagcTGAAGCATGC--AGGAGCGTGCAAGAGGGATGTGGCCAGAGAGGGCGGAGCCAGGGCAGGCGGGCCTCAGAGGTCACGGTCAGGAGCGCAGTGCTCACATGCAGAGCAGTAGGAGGCACTGGAGGGTTTGAGCATGTGAGTGATGGGGTCTGGCCTGTTTTCT--CAAAGGATCACACTGGTTGCTGCTGTTTGTATGAC-CTTGTTGGCTCTCTTACCTGGGGCAAGTTGTTTAAGCTCTCTGAGCCtgagtctcctcatctgtaaaatggggatgatcacAGTACCCACCTCACAGGCATCACTGGAGGCTGCTGTGTGACAATCT--GGAGAGCACTTAGCAAT-------GTGTAT-TTAAGGGCTGAATAAA-CTTTGCTTTCTCACATCCCCATGTCCAAAGCCCTCATTC---------------T--CCACCATCTGACTTGAACCTGTTGATCCTGCCT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28210426 878 - 130588469 AAAATGATGTGCTTaagagtataggctttggagccagacagac----ctgagttccagtcccaactc-acaacttTTGCT-attcaacaaatactcattgaattcctgtcaaatgccaggca-catgcccagtgcaagggacacaggaggacaagacctccatggccctggcctctcgacactcacagtctggt----------gggaacaaatacccagtgaatgaacaagctcatcacccactgtgagaaagcaatgagggacagaca---cagga---tggg-ccctgaaagagacaggggcagtgggtgctggagggccactcagggtattcagggagggcatctcaggaaggggaca-atgatctggggactggacacaaggcaggagccaggtgtgtggt-actggagaagggtatccaggcaaagcgctcggagtgatgggggaagggaagaggctggagcatgc--aggagcgtgcaagagggatgtggccagagagggcagagccagggcaggcaggcctcagaggtcacggtcaggagcgcagtgctcacgcgcagagcagtaggaggcactggagggtttgagcatgtgagtgatggggtctggcctgttttct--caaaggatcacactgattgctgctgttTGTATGAC-cttgttggctctctgacctggggcaagttgtttaagctctctgagcctgagtctcttcatctgtaaaatggggatgatcacagtacccacctcacaggcatcactggaggctgctatgtgacaatct--ggagagcacttagcagtgtgacccgtgtat-ttaagggctgaataaa-ctttgcttTCTCACATCCCCATGTCCAAAGCCCTCATTC---------------T--CCACCATCTGACTTGAACCTGTTGATCCTGCCT i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64674957 878 + 155834243 AAAATGATGTGCTCaagcgtataggccttggagctgggccaac----ctgagctccagtcccagctctgcaactttcatt-catcaacaaatacccattgagttcctgtctcgtgccaggca-catgcccagtgcaagggacacaggaggaaaagacctacagggccctggcctcttgctgctcacagtctggc----------gggaacaaacacccagtgaatggacaagctcatcacccactgtgagaaagcagtgagggacagacagggcaggagactgag-gcacaaagaaggc--agatgtttaggcctggagggccactcagggcattcagggagagcctctcagggaggggacatctgacctgggaactgaacaccaggcaggagccacatatgtggg-actggagaagggcgtccatgcaaagagctgggaatgatgggggcagagaagaggctggagtgtgc--aggagcacgcaggaggggcggggccagagagggcggggccagggcagg-gggcctcagaggtcacggtcaggatcgcagtgctcatgcaaag------aggcagcactggagggtttgagcaggtgagtgacagggtctggcctgtctttt--caaaggatcatgctggttgctgctgttTGTGTGAC-cttgttagttctctgatctggggcaagttgtttaagctctctaagcctctgtatcctcgtctgtaaaatggggataatcacagtacccacctcacaggcatcattggaggctgacatgtgacaatct--ggagagcacttagcaatgtgactcatgcat-ttaagtgctgaataaaGCTTTGCTGACTCACATCCCTGCGTCCGAAGTCCTCGCCC---------------T--CCACCGCCTGACTTGAACCTGTTGTTCCTGCCT i calJac3.chr7 C 0 C 0 s canFam3.chr2 15021920 872 - 85426708 aaagaAATGTG-----Aagtatgggcttgggagtaagacaggcctggctgagtttgagccctggctttgcacctttcattcactcaacaaatagtcactgggtgcctgccacgtgccaggca-ctgtctcagagcaggggacacagagggaccagatccacgtggccccggccct------cccataggctggccggggaggcagtgagcaaccaaccaatgag-gagctagctagttgcccacggtgagaaggccacaagag-cataca---caggg---caggaccctgagagtgacggggacggtggg-gcaggaggccacctcggtgcattcatggaggggccctcaaggacgggccatctgagct-ggacccggacacccagaagga-ctagccgtgcagacactggtgaagggcgtccagacacagagctcagattgat--gagaagaaatgaggccagagcgagcagaggagcgggcaggagggacacgggcaga---ggccacatcggggaagg---gccctggcggtcacagccaggagctcagcctttacttacagagcagtaggt--caccggagggtctgagcaggcaagtcatgtgatctggcttattttttccccatcagtcactgtggctgctgCAGTTTGTGtgacacttggtgcctctgtgactttgggcaagtcac--aggctccctgagcctccatctcttcatctgtaaaacggggatgag---agtacctcgctcacgggcttcatcagaagcggcc-cgtgacaatcc-cacagagctcttggccacgcgccccaggcacggcaggtgccaaataaaGCTGTGTGTGGCTGCATCACCACATCCAAAGCCC-CGTCC---------------TCGCCTACACCTGG--TGAAACCATGCTCCCTGCCC i canFam3.chr2 I 1964 I 121 a score=111585.000000 s hg38.chr1_KI270760v1_alt 103653 37 + 109528 ATGCAATGACTTCATTATTTCTGCGTTGCCCTTAGCC s panTro4.chr1 30534350 37 + 228333871 ATGCAATGACTTCATTATTTCTGCACTGTCCTTAGCC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30123937 37 - 229942017 GTGCAATGATTCCATTATTTCTGCACTGCCCTTAGCC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 577618 37 - 28733288 ATGCAATGCCTCCATTATTTCCGCACTGCCCTTAGCC i nomLeu3.chr24 C 0 C 0 s rheMac3.chr1 33420190 37 + 229590362 GTGCAATGACTCCATTATTTCTGCACTGCCCTTAGCC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29931786 37 - 227556264 GTGCAATGACTCCATTATTTCTGCACTGCCCTTAGCC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32694927 37 + 220367699 GTGCAATGACTCCATTATTTCCACACTGCCCTTAGCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28211304 37 - 130588469 GTGCAATGACTCCATTATTTCTGCACTGTCCTTAGCC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64675835 37 + 155834243 AGGCAATGACTCCATTATTTCTGCACTGCCCTTAGCC i calJac3.chr7 C 0 C 0 e canFam3.chr2 15022792 121 - 85426708 I a score=2227900.000000 s hg38.chr1_KI270760v1_alt 103690 692 + 109528 ATGGGGATGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGTCCATCA----------GAGGTCAGCAGGG-------------------AGAGGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCAGGCCCCGCTCCCAGTGAGGGCCTTGCAAGTGGCCTTGGCATCCATCAATGTCTCGGCTCCATCTCCTGGCTGCCTGGGATATATGATGTGTCCCAATCAGGGGCAAGCAGAGAGGTCGT-A-AAAGTAATCATTGCCTTCACTGGCTCCTACTGCCAGATTTATTGTGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAGCCGGCCCATCCATGCTTGTAGAAATCCTATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CCCATACCTGATTGGCCAGAGGCCCTGGGCAGAACTCAGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCTGAGAGGCTGCCACCTCTGACACATTTCGCAGCATTTGGGAGGCAGTGGTTAGGCCACAAATTACGCATCTGCCATTGCACTGAGGGGATTCTTGGGCTATTGAC----CCcagggaggccacagagcagagcagttaaaggcccaggtgttggagtcagcctaaacatgggttcaagc-----ccctgctctgccatatattggccaggtgaccttggctgagtaaactcacttccctgagcctccatgt-cttgtctccaaaatg s panTro4.chr1 30534387 692 + 228333871 ATGGGGGTGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGTCCATCA----------GAGGTCAGCAGGG-------------------AGAGGTCCAT--GGAGCCCAGGCAGAGAGAGTGGCCAGGCCCCGCTCCCAATAAGGGCCTTGCAAGTGGCCTTGGCATCCATCAATGACTCGACTCCATCTCCTGGGTGCCTAGGATATATGATGTGTCCCAATCAGGGGCCAGCAGAGAGGTCAT-A-AAAGTAATCATTGCCTTCACTGGCTCCTACTGCCAGATTTATTGTGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAGCCGGCCCATCCATGCTTGTAGAAATCCTATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CCCATACCTGATTGGCCAGAGGCCCTGGGCAGAACTCAGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCTGAGAGGCCGCCACCTCTGACACATTTCGCAGCATTTGGGAGGCAGTGGTTAGGCCACAAATTACGCATCTGCCATTGCACTGAGGGGATTCTTGGGCTATTGAC----CCcagggaggccacagagcagagcagttaaaggcccaggtgttggagtcagcctaaacatgggttcaagc-----ccctgctctgccatatattggccaggtgaccttggctgagtaaactcacttccctgagcctccatgt-cttgtctccaaaatg i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30123974 690 - 229942017 ATGGGGGTGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGTCCATCA----------GAGGTCAGCAGGG-------------------GGAGGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCACGCCCCGCTCCCAGTGAGGGCCTTGCAAGTGGCCTTGGCATCCATCAATGTCTCAGCTCCATCTCCTGGGTGCCTAGGATATATAATGCGTCCCAACCAGGGGCCAGCAGAGAGGTCGT-A-AAAGTAATCATTGCCTTCACTGGCTCCTACTGCCAGATTTATTATGCCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAGCCAGCCCATCCACGCTTGTAG-AATCCTATTTGCTGGGGCCTGGGTGGGTGGAGGTTTCTA---CCCATACCTGATTGGCCAGAGGCCCTGGGCATAACTCAGCTGGACCATTCATCTTCCTGTGCTCCAGACCACCTTGTCTGAGAGGCTGCCAACTCTGACACATTTCACAGCACTTGAAAAGCAGTGCTTAGGCCGCAAATTACACATCTGCCATTGCACTGAGGGGATCCTTGGGCTATTGAC----CCcagggaggccacagagcagagcagttaaagg-tcaggtgttggagtcagcctaaacatgggttcaagt-----ccctgctctgccatatattggccaggtgaccttgggtgagtcaactcacttccctgagcctccatat-cttgtctctaaaatg i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 577655 685 - 28733288 ATGGGGGTGTTGAGGCCAGAGCTC------------------------------------ACTAGGCTTCTGTCCATCA----------CAGGTCACCAGGG-------------------GGACGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCAGGCCCCGCTCCCAGCGAGGGCCTTGCAAGTGGCCTTGGCATCCATCAATGTCACGGCTCCATCTGCTGGGTGCCTGGGATACATAATGCGTCCCAATCAGGGGCTG--AGAGAGGTTGT-GTGAAGTAATCATTGCTTTCGCTGACTTCTACGGCCAGATTTATTATAGTATAAAGAAATAACTTAGCTTCCGGCAGTAACAGGCAGCTGGCCTAGCTGCCCTTGTAGAAATCTTATTTGCTGGGGCCTGGGTGGGTGGAGGTTTCTA---CCCACACCTGCTTGGCCAGAGGCCCTGGACAGAACCCGGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCCAAGAGGTTACCACCTCTGCCACATTTCACAGCATTTGAAAAGCAGTGCTTAGGCCACAAATTCCCCATCTGGTGTGACACCAAGGG-----TCAGGCTTTTGAC----CCcagggaggccacagagcagagcagttaaaggcccaggtgttggagtc-gcataaacatgggttcaagt-----ccctgctctgccatatattaggcaggtgaccttgggtgagtaaactcacgtccctgagcctccatgt-cttgtctctaaaatg i nomLeu3.chr24 C 0 I 63 s rheMac3.chr1 33420227 686 + 229590362 ATGGGAGTGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGTCCATCA----------GAGGTCAGTGGGG-------------------AGAGGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCAGGCCCCACTCCCACTGAGGGCCTTGCAAGTGGCTGTGGCATCCATCAGTGACATGGCTCCATCTCCTGGGTGCCTGGGGTATATAATGTGCCCCAATCAGGGATCAGCAGAGAGGTCAT-A-GAAGTAATCATTGCTTTTGCTGACTCCTACTGCCAGATTTATTATGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAACTGGCCCATCCATGCTTGTAGAAA---TATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CGCACACCTGCTTGGCCAGAGGCCCTGGACAGAGCCCGGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCCAAGAGGCCACCACCTCTGACACATTTCACAGCATGTGGGAAGCCGTGCTTAGGCCACAAATTCCCCATCTGACATTGCACTGAGGGGATCC-TGGGCTGTTGAC----CCCA-GGAGGCCACAGAGCAGAGCAGATaaaggcccaggta-tggagtcagcctaaacacgggttcaagt-----ccctgctctgccatatgttggccaggtgaccttgggtgagtaaactcacttccctgagcctccgtgt-ctcatctctaaactg i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29931823 689 - 227556264 ATGGGAGTGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGCCCATCA----------GAGGTCAGCGGGG-------------------AGAGGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCAGGCCCCACTCCCACTGAGGGCCTTGCAAGTGGCTGTGGCATCCATCAGTGACACGGCTCCATCTCCTGGGTGCCTGGGGTATATAATGTGCCCCAATCAGGGATCAGCAGAGAGGTCAT-A-GAAGTAATCATTGCTTTCGCTGACTCCTACTGCCAGATTTATTATGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAACTGGCCCATCCACGCTTGTAGAAATCTTATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CGCACACCTGCTTGGCCAGAGGCCCTGGACAGAGCCCGGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCCAAGAGGCCACCACCTCTGACACATTTCACAGCATTTGGGAAGCCGTGCTTAGGCCACAAATTCCCCATCTGACATTGCACTGAGGGGATCC-TGGGCTGTTGAC----CCCA-GGAGGCCACAGAGCAGAGCAGATaaaggcccaggta-tggagtcagcctaaacacgggttcaagt-----ccctgctctgccatatgttggccaggtgaccttgggtgagtaaactcacttccctgagcctccgtgt-ctcatctctaaactg i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32694964 689 + 220367699 ATGGGGGTGTTGAGGCCAAAGCTC------------------------------------ATTAAGCTCCTGTCCATCA----------GAGGTCAGCAGGG-------------------AGAGGTCCAT--GGAGCCCAGGGAGAGAGAGTGGCCAGGCCCCACTCCCAGTGAGGGCCTTGCAAGTGGCTGTGGCATCCATCAGTGACacagctccatctcctgggtgcCTGGGGTATATAATGCGCCCCAATCAGGGACCAGCAGAGAGGTCAT-A-GAAGTAATCATTGCTTTCGCTGACTCCTACTGCCAGATTTATTATGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGGCAGCTGGCCCATCCACGCTTGTAGAAATCTTATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CCCACACCTGCTTGGCCAGAGGCCCTGGACAGAGCCCGGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCCAAGAGGCCACCACCTCTGACACATTTCACAGCATTTGGGAAGCCGTGCTTAGGCCACAAATTCCCCATCTGGCATTGCACTGAGGGGATCC-TAGGCTGTTGAC----CCCA-GGATGCCACAGAGCAGAGCAGATAAAGGCCCAGGTA-TGGAGTCAGCCTAAACACGGGTTCAAGT-----CCCTGCTCTGCCATATGTTGGCcaggtgaccttgggtgagtAAACTCACTTCCCTGAGCCTCCATGT-CTCATCTCTAAACTG i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28211341 690 - 130588469 ATGGGGGTGTTGAGGTCAAAGCTC------------------------------------ATTAAGTTCCTGTCCATCA----------GAGGTCAGCAGGG-------------------AGAGGTCCAT--GGAGCCCAGGGAGACAGAGTGGCCAGGCCCCACTCCCAATGAGGGCCTTGCAAGTGGCTGTGGCATCCATCAGTGTCACGGCTCCATCTCCTGGGTGCCTGGGGTATATAATGTGCCCCAATCGGGGACCAGCAGAGAGGTCAT-A-GAAGTAATCATTGCTTTCGCTGACTCCTACTGCCAGATTTATTATGGCATAAAGAAACAACTTAGCTCCTGGCAGTAACAGACAGCCAGCCCATCCACGCTTGTAGAAATCTTATTTGCTGGGGCCTGGATGGGTGGAGGTTTCTA---CCCACACCTGCTCGGCCAGA-GCCCTGGACAGAACCTGGCTGGACCATTCATCTTCCTGTGCTCCAGGCCACCTTGTCCAAGAGGCCACCACCTCTGACACATTTCACAGCATTTGGGAAGCAGTGCTTAGGCCACAAATTACACATCTGGCATTGCACTGAGGGGATCCTTGGGCTGTTGAC----CCCAGGGAAGCCACAGAACAGAGCAGATaaaggcccaggtg-tggagtcagcctaaacacgggttcaagt-----ccctgctctgccatatgttggccaggtgaccttgggtgagtaaactcacttccctgagcctccgtgt-ctcatctctaaactg i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64675872 691 + 155834243 ATGGGGATGTTGAGACCAAAGCTC------------------------------------ATTATGCTCCTGTCCATCA----------GAGGTCAGTGGAG-------------------GGAGGTTCAT--GGAGCCCAGAAAGAGAGAATGGCCAGGCCCCGCTCCCACTGAGGGCCTTGCAAGTGGCCTTGGCATCCATCAGTGTCACGGCTCCATCTCCTGGGTGCCTGGGATATATAATGCATCCCAACTGGGGGCCAGCAGAGAGATCGT-A-GAAGTAATCATTGCTTTCACTGGCTCCTACAGCCAGATTTATTAGGGCATAAAGAAACAACTTAGCCCCTGCTGGTAACAGGCAGCCAGCCCATCCGCACTTGTAGAAATCCTGTTTGCTGGGGCCTGGGTGGGTGGAGGTTTCTA---CCCACACCTGCTCAGCCTGAGGCCCTGGACAGAACCCGGCTGGACCATTCATCTTCCTGTGCCCCAGGCCACCTTGTCCGAGAGGCCGCCACCTCTGACACATCTCATAGCACTTGGGAAGCAGTGCTTAGGCTACAAATTACCCATCTGGTGTTGCACCGAGGGGGTCCTCGGGCTACTCAC----CTcagggaggccacagagcagagcagttaaagacccaggtg-tggagtcagcctgaagatgggttcaagt-----ccccgctctgccatatattggccaggtgaccttgggtgagtaaactcactgccctgagcctccatgt-cttatctctgaaatg i calJac3.chr7 C 0 C 0 s canFam3.chr2 15022913 741 - 85426708 GCGGAGGCCCTCAGGCCAAGGCCTCAGATGCCGGAGTCCCCGCCACCCCCCACATGGCAAAGTAGGTTCTGGCCCAGCATCGCCACCCTGATTCCAGCAGGGTCCTCGGCTGTGGCTTGTCAGAGGTCCTCCAGGGACCCGGGGGGGCCGGGTGGC--GGGCAGGCTCCCGGTGAGGGCCTTGCGAGCAGCTTCCACATCCATCAAAGCCACGGCTCC-TCTCCCGGGTGCCCAGGATGTAGGACGTGTCCCAGTCAGGGGCCACCGGAGAGGTCGTGA-GGAGTAATCATTGCCTCGGCCGGCTCCTCTGGCCGGATTTATGATGACATAAGAAGCAAATTCAGCTTCTGGCAG---CAGACAGCCGGCCCGTCTGCACTTCTAGAAACCCTTTCTATGGGGATCTGGGTGGGTGGGGGCTTCTACTCCCCACACCTGCAAGGCCTGCGGCCCTGGGCAGAGCCAGCCTGGGCCATTCGTCTTCCCGTCCTACCGGCTGCCTTGTCCGAGAGGCCACCACCTCTGACACA----------------AATCAGTGCCCGGGCCACACACCGGCCATCTGGTGTCGCATCAAGGG-ATCCTCCAGCTGTCAACACCACCCAGACCGGCCACGGAGCAGAGCAGTTGGAggcctt-----tggagtcagcct-aacttgggggcaaaccggagccccacgctgctgtgtaacagc--ggagaccccgaatgagtcaggtgccttccccg-gcctccgtgtcctcgtccccggaatg i canFam3.chr2 I 121 C 0 a score=21167.000000 s hg38.chr1_KI270760v1_alt 104382 8 + 109528 gaggggta s panTro4.chr1 30535079 8 + 228333871 gaggggta i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30124664 8 - 229942017 gaggggta i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33420913 8 + 229590362 aaggggta i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29932512 8 - 227556264 aaggggta i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32695653 8 + 220367699 AAGGGGTA i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212031 8 - 130588469 aaggggta i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64676563 8 + 155834243 aaggggta i calJac3.chr7 C 0 C 0 s canFam3.chr2 15023654 7 - 85426708 aaggggt- i canFam3.chr2 C 0 C 0 e nomLeu3.chr24 578340 63 - 28733288 I a score=1027300.000000 s hg38.chr1_KI270760v1_alt 104390 345 + 109528 ggaatccccgctttaaagagctgctgtatggagtaag--aaagagccaaagggtgtaggacacataacacaggaataggcactaaacgAAAAGTGACTGTCACCATTTTCATTATCCAGGGGCTTCAGTATTATGGCGTgagatgccctttattgagggccagttacgtcacca-gggactatgctggctcttttaaaatattttgtccctagacctcacaaccaatcctgcagataggttcagttatgtttattg-----------------tggggtggttaggggac--tgcaaggtcgcttggctggtgggggggggagctgggggcgggaccttggcctgtgggttctggagctggtgctcc s panTro4.chr1 30535087 345 + 228333871 ggaatccccgctttaaagagctgctgtatggagtaag--aaagagccaaagggtgtaggacacataacacaggaataggcactaaacgAAAGGTGACTGTCACCATTTTCATTATCCAGGGGCTTCAGTATTATGGCGTgagttgccctttattgagggccagttatgtcacca-gggactatgctggctttttaaaaatattttgtccctagacctcacaatcaatcctgcagataggtccagttatgtttattg-----------------tggggtggttaggggac--tgcaaggtcgcttggctagtggggtgtggagctgggggcgggaccttggcctgtgggttctggagctggtgctcc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30124672 347 - 229942017 ggaatccccactttaaagagttgctgtatggagtaag--gaagagctaaagaatgtaggacacataacacaggaataggcacTAGATGAAAAGTGACCATCACCATTTTCATTATCCAGGGGCTTCAGTATTATAGCATgagatgccctttattgagggccagttatgtcacca-gggactatgctggctctttttaaataatttgtccctagacctcacaaccaatcctgcagataggtccggttatgtttattg-----------------tggggtggttaggggactgtgcaaggtcgcttggctggtggggtgtggagctgggggcaggaccttggcctgtgggttctggagctggtgctcc i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 578403 341 - 28733288 ggagtccccactttaaagagctgctgtatggaacaaggagaagagataaagggtgtagggcacataacacaggaataggcactaaacgaaaggtgatcgtcaCCATTTTCATTATCCACAGGCTTCAGTATTATGGCGTGGGAtaccctttattgagggtcaattatgtcacca-gggactatgctggttccttttaaatattttgtccctagacctcacaaccaatcctacagataggtcctgttatgtttattg-----------------cagggttgttaggggattgtgcaaggtcacccaact-gtggggtgtggagctgggGGCGGGA-------CTATGGGTTCTGGAGCTGGTGCTCC i nomLeu3.chr24 I 63 C 0 s rheMac3.chr1 33420921 345 + 229590362 ggaatccccactttaaagagctgctatatggagtaag--ggagagataaaggctgtagggcacacaacacaggaataggcactaaatgaaaggtgacCGTCACCATTTTCATTATCCAGGGGCTTCAGTATTATGGTATgagatatcctttattgagggccaattatgtca-ta-aggactacgctggcccttttaaaatattttgtccctagacctcacaaccaatcctgcagataggtcctgttatattcattg-----------------cagggttgttaggggattgtgcaaggtcacctgact-atggggtgtggagctgggggcaggaccttgtcctgtgggttctgaagctggtgctcc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29932520 345 - 227556264 ggaatccccactttaaagagctgctatatggagtaag--ggagagataaaggctgtagggcacacaacacaggaataggcacaaaatgaAAGGTGACCGTCACCATTTTCATTATCCAGGGGCTTCAGTATTATGGTATgagatatcctttattgagggccaattatgtca-ta-aggactatgctggcccttttaaaatattttgtccctagacctcacaaccaatcctgcagataggtcctgttatattcattg-----------------cagggttgttaggggattgtgcaaggtcacctgact-atggggtgtggagctgggggcaggaccttgtcctgtgggttctggagctggtgctcc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32695661 345 + 220367699 GGAATCCCCACTTTAAAGAGCTGCTATATGGAGTAAG--GGAGAGATAAAGGCTGTAGGGCACACAACACAGGAATAGGCACAAAATGAAAGGTGACCGTCACCATTTTCATTATCCAGGGGCTTCAGTATTATGGTATGAGATATCCTTTATTGAGGGCCAATTATGTCA-TA-AGGACTATGCTggcccttttaaaatattttgtccctAGACCTCACAACCAATCCTGCAGATAGGTCCTGTTATATTCATTG-----------------CAGGGTTGTTAGGGGATTGTGCAAGGTCACCTGACT-ATGGGGTGTGGAGCTGGGGGCAGGACCTTGTCCTGTGGGTTCTGGAGCTGGTGCTCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212039 346 - 130588469 ggaatccccactttaaagagctgctgtatggagtgag--ggagagataaaaggtgtagggcacacaacacagGAATAGGCACTAAATGAAAGGTGACCGTCACCATTTTCATTATCCAGGGGCTTTGGTATTACGGTGTgagatgccctttattgagggccaattgtgtcacta-aggactacgctggctccttttaaatatgttgtccctagacctcacaaccaatcctgcagataggtcctgttgtgtttattg-----------------cagggttgttaggggattgtgcaaggtcacccgact-gtggagagtggagctgggggcaggaccttggcctgtgggttctggagctggtgctcc i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64676571 345 + 155834243 ggaattcccactgtaaagagctgctgtgcggattaag--gaagagatgaagggtggagggctcgtaacacaggaataggcactaaacgaaaggtggc-gtcaccattTTCATTATCCAGGAGCTTCAGTATTATGGTGTGAGACTccctttattgagagccaattatgtcccca-gggactatgctggctctttttaagtatttcgctcctagacctcacaaccaatcttgcaggtgagtcctgttatgtttactg-----------------t-gggtgcttaggggactgtgcaaggttaccctgctggcagggtgtggagctgggggcaggaccttggcttgtgggttctggagctggtgctcc i calJac3.chr7 C 0 C 0 s canFam3.chr2 15023661 318 - 85426708 ggtgtccttacgtcaaagagctgtcgtatggattaag--taggaggtaa---------------------------GGGTGCTGAACAGAAGGTCGTGCGGACCGTGTTTACTAGCCGGGGACTTTGGGATCA-----TGTGATGGcatttactgagggccggtcgggtcaccaccggactatgctaattcttt--aaacatttgaactctagact----------ttctgcaagtagggattgttatgttgtctagattaggaaactgagcctggggtggttctgaatgggtgcaaggtcacc-ggctggcaga--ctggagctgggggtgagatgccggcctgctgactccggagccggggctcc i canFam3.chr2 C 0 N 0 a score=569409.000000 s hg38.chr1_KI270760v1_alt 104735 225 + 109528 tcctaatacacAGCCCACCTCCCCAGCTCCTCCGATAGGCCACGCAAGTCCCCTGGTCTGTCGGGCACGTAGGTCCAGCCTCCCTCCGTTCCTCTCTCCCTCTTGCCGATATTGCCCGACCGCATCAccc------agcccttcactgggtgatggacacataaggacaaaacagatgagcttcccgccctcaaggagctcaacatccaagagggTGAAGAGCAAAGCTGC s panTro4.chr1 30535432 225 + 228333871 tcctaatacacAGCCCACCTCCCCAGCTCCTCCGATAGGCCACACAAGTACCCTGGTCTGTCGGGCACGTAGGTCCAGCCTCCCTCCGTTCCTCTCTCCCTCTTGCCAATATTGCCCGACCGCATCAccc------agcccttcactgggtgatggacacataaggataaaacagatgagcttcccaccctcaaggagctcaacatccaagagggTGAAGAGCAAAGCTGC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30125019 225 - 229942017 tcctaatatacAGCCCACCTCCCCAGCTCCTCCAATAGGCCACGCAAGGCCCATGGTCGTTCGGGCACGTAGGTCCAGCCTCCCTCCGTTCCTCTCTCCCTCTTGCCAATATTGCCCGACCACATCAccc------agcccttcactgggcgatggacacataaggataaaacaaatgagcttcctgccctcgaggagctcaatatccaacaaggTGAAGAGCAAAGCTGC i ponAbe2.chr1 C 0 C 0 s nomLeu3.chr24 578744 225 - 28733288 TCCTTATACAGAGCCCACCTCCCCAGCTTCTCTGAAAGGCCACACAAGGCCCCTGGTCAGTCAGGCAGGCAAGCCCAACCT--CTCCTTCCTTCCCTCCCTCATGCCAACATTTCCAGGGCACTAGCTCCATGACAAGCCCCTTACTGGGCAATGGACAC---GAGATGGCACAGAAATACTCCCTGCCCTTGAGGGGC-CGGCACCGAACAGCGCAAAGGGCCGAACCGC i nomLeu3.chr24 C 0 N 0 s rheMac3.chr1 33421266 224 + 229590362 tcctaatacacAGCTCACCTCCCCAGCTCCTCTGAGAGGCCACGCAAGGCCCCTGGTCAGTC-GGTATGTAGGTCTAGCCTCCCTCCGTTCCTCTCTCCCTCTTGCCAACACTGCCCAACCACATCAccc------agcccttcaccgggtgatggacacatggggataaaacagatgagcttcctgccctcgaggagctcaacatccaacagggTGAAGAGCAAAGCTAC i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29932865 224 - 227556264 tcctaatacacAGCTCACCTCCCCAGCTCCTCTGAGAGGCCACGCAAGGCCCCTGGTCAGTC-GGTATGTAGGTCTAGcctccctccgttcctctctccctcTTGCCAACACTGCCCAACCACATCAccc------agcccttcaccgggtgatggacacatggggataaaacagatgagcttcctgccctcgaggagctcaacatccaacagggTGAAGAGCAAAGCTAC i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32696006 224 + 220367699 ACCTAATACAGAGCTCACCTCCCCAGCTCCTCTGAGAGGCCACGCAAGGCCCCTGGTCAGTC-GGTATGTAGGTCTAGCCTCCCTctgttcctctctccctctttccaacACTGCCCAACCACATCACCC------AGCCCTTCACCGGGTGATGGACACATGGGGATAAAACAGATGAGCTTCCTGCCCTCGAGGAGCTCAACATCCAACAGGGTGAAGAGCAAAGCTAC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212385 223 - 130588469 tcctaatacgcAGCTCACCTCCCCAGCTCCTCTGAGAGGCCACACAAGGCTGCTGGTCAGTC-GGTATGTAGGTCTAGCCTCCCTCCGTTCCTCTCTCTCTCTTGCCAACACTGCCCAACAACATCAccc------agcccttcaccgggt-atggacacatggggataaaacagatgagcttcctgccctcgaggagctcaacatccaacagggTGAAGAGCAAAGCTAC i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64676916 209 + 155834243 tcctaatacacAGCCCACCTCCCCAGCTCCTCCGAGAGGCCACACAAGGCCCCTGGTCATCTGGGCACATAGGCCCAGCCTCCATCCGTTCCTCTCTCCCTCTCGCCaacattaaccaaccacgtcactc------aaccctttcctgggtgatggacacatggggataaaacagatgagcttcctgccctcaaggagctcaacatcca----------------AGCTGC i calJac3.chr7 C 0 C 0 a score=687124.000000 s hg38.chr1_KI270760v1_alt 104960 373 + 109528 TGGCCACTGTGCAGAGTGTGTGGCTGGCTCTTGTCTTGACATTGCCACCCTTTCTGCCATATTCTGTAACActtccccaagaaaatgcttccaaggagctgtctgctatccctggctccaattcctctccccttgagctctcactcctaccactccaccaatggctgtatgccacatatgacccccgtatcactTATGACCTCTGCATCATCTATGACCCCCATATCACTTATGACCTCTGGatcacctata------------------acctccacatcatctgtgacctctgcatcacttatgacctccacatcat-ctatggcctccaagtcacctatgacctacacatcacctgtgacctccacatcacctatgacctctacatcac s panTro4.chr1 30535657 373 + 228333871 TGGCCACTGTGCAGAGCGTGTGGCTGGCTCTTGTCTTGACATTGCCACCCTTTCTGCCATATTCTGTAACActtccccaagaaaatgcttccaaggagctgtctgctatccctggctccaattcctctcccctcgagctctcactcctaccactccaccaatggctgtatgccacatatgacccccatatcactTATGACCTCTGCATCCTCTATGACCCCCATATCACTTATGACCTCTGCATCATCTATA------------------ACCTCCACATCATCTGTGACCTCTGCATCACTTATGACCTCCACATCAT-CTATGGCCTCCATGTCACCTATGACCTTCACATCACCTGTGACCTCCACATCACCTATGACCTCTACATCAC i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30125244 373 - 229942017 TGGCCACTGTGCAGAGCGTGTGGCTGGCTCTTGTCTTGACATTGCCACCCTTTCTGCCATATTCTGTAACActttctcaagaaaatgcttccaacgagctgtctgctatccctggctccaattcctctcccctcgagctctcactcctaccactccaGCACTGGCTGTATGTCACGTATGACCCCCGTATCACCTATGACCTCTGCATCATCTATGACCCCCATATCACCTATGACCTCCGCATCATCTATG------------------ACCCCCGTATCACCTATGACCTCCGCATCATCTATGACCCCCGTATCAC-CTATGACCTCCGCATCACCTATGACCCCCGTATCACCTATGACCTCCGCATCATCTATGACCCCCGTATCAC i ponAbe2.chr1 C 0 C 0 s rheMac3.chr1 33421490 325 + 229590362 TGGCCACTGTGCAGAGCAGGTGGCTGGCTCTTGTCCTGACA------------CTGCCATATTCTATAACACTTCCCcaagaaaacgcttccaaggagctgtctgccatccctggctccaactcctctcccctcgacctctcACTCCTACCGCTCCACCAACGGCTGTATGCCACCTATGACTCCTATATCACCTAGGACCTCTGCATCATCTGTGACTCCCATATCACTTACGATCGCTGCATCACCTATG------------------ACCCCCAAATCACTTATGACCTCTGCATCACCTATGACCTCTACATCAC-CTATGACCTCTATATCACCTAT------------------------------------AACCTCCACATTAT i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29933089 334 - 227556264 TGGCCACTGTGCAGAGCAGGTGGCTGGCTCTTGTCCTGACA------------CTGCCATATTCTATAACACTTCCCcaagaaaacgcttccaaggagctgtctgccatccctggctccaactcctctcccctcgacctctcACTCCTACCGCTCCACCAATGGCTGTATGCCACCTATGACTCCTATATCACCTAGGACCTCTGCATCATCTGTGACTCCCATATCACTTACGATCGCTGCATCACCTATG------------------ACCCCCAAATCACTTATGACCTCTGCATCACCTATGACCTCTACATCAC-CTATGACCTCTATATCACCTATAACCTCCAC---------------------------ATTATCTATGGCCT i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32696230 337 + 220367699 TGGCCACTGTGCAGAGCAGGTGGCTGGCTCTTGTCCTGACACTGCCACCCTTTCTGCCATATTCTATAACACTTCCCCAAGAAAACGCTTCCAAGGAGCTGTCTGCCATCCCTGGCTCCAACTCCTCTCCCCTCGACCTCTCACTCCTACCACTCCACCAATGGCTGTATGCCACCTATGACTCCTATATCACCTGGGACCTCTGCATCATCTGTGACTCCCATATCACTTACGATCGCTGCATCACCTATG------------------ACCCCCAAATCACTTATGACCTCTGCATCACCTATGACCTCTACATCAC-CTATGACCTCTATATCACCTAT------------------------------------AACCTCCACATTAT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212608 305 - 130588469 TGGCCACTGTGCAGAGCAGGTGGCTGGCTCTTGTCCTGATACTGCCACCCTTTCTGCCATATTCTATAACACTTCCCcaagaaaacacttccaaggagctgtctgccatccctggctccaactcctctcccctcaacctctcACTCCTACCGTTCCACCAATGGCTGTATGCCACCTATGACTCCTATATCACCTAGGACCTCTGCATCATCTGTGACTCCCATATCACTTATGATCTCTGCATCACC------------------------------------TATGACCTCTACATCACCTATGACCTCTATATCAC-CTATAACCTCCACATTATCTAT-------------------------------------------------- i chlSab2.chr20 C 0 C 0 s calJac3.chr7 64677125 392 + 155834243 TTGTCAACGTGCAGAGTGTGTGGCTGGCTCTTGTCTTGACATTGCCACCCTTTCTGCCAAATTCTGTAACACTTCCCCAAGAAAATGCTTCCGAGGAGCTGTCTGCTATCCTTGGCTCCTACTCCTCTCCCCTCGAGCTCTCACTCCTACCACTCCACCAATGGCTATACGTCACCTATGACCCTTATATTACCTATGACCTCTGTATCACCCATGACCCCCACATCACCTATGACCTCTGCATCACCTATGACCTCCACATCTCCTGTCACCCCCATATCACCTGTAACCTCTGTGTCACCTATGACCTCCACATCACTCTATGGCCTCCCTGTCACCTCTGACCTCCATGTCACCTGTGACCTCCACATCACCTGTGACCTCTACATTac i calJac3.chr7 C 0 N 0 a score=124879.000000 s hg38.chr1_KI270760v1_alt 105333 83 + 109528 ctatgacctacacatcatctatggcctccacatcatctatGGcctccacatcacctatgatcttcatgtcacctatgacctcc s panTro4.chr1 30536030 83 + 228333871 CTATGACCTACACATCATCTATGGCCTCCATGTCATCTATGGcctccacatcacctatgatcttcatgtcacctatgacctcc i panTro4.chr1 C 0 C 0 s ponAbe2.chr1 30125617 83 - 229942017 CTATGACCTCCGCATCATCTATGACCCCCGTATCACCTATGACCTCCGCATCATCTATGACCCCCGTATCACCTATGACCTCC i ponAbe2.chr1 C 0 N 0 s rheMac3.chr1 33421815 83 + 229590362 CTATGGCCTCCATGTCATCTATAACCTCCATGTCACCTGTGACCTCCACATCACCTACGATCTTTATgtgacctatgacctcc i rheMac3.chr1 C 0 C 0 s macFas5.chr1 29933423 74 - 227556264 CCA---------TGTCATCTATAACCTCCATGTCACCTGTGACCTCCACATCACCTACGATCTTTATGTGACCTatgacctcc i macFas5.chr1 C 0 C 0 s papAnu2.chr1 32696567 83 + 220367699 CTATGGCCTCCATGTCATCTATAACCTCCATGTCACCTGTGACCTCCACATCACCTACGATCTTTATGTGACCTATGACCTCC i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212913 79 - 130588469 ----GGCCTCCATGTCATCTATAACCTCCATGTCACCTGTGACCTCCATATCACCTACGATCTTTATGTGACCTatgacctcc i chlSab2.chr20 C 0 C 0 a score=1416972.000000 s hg38.chr1_KI270760v1_alt 105416 1094 + 109528 acgttgctgaatgcagtatcaaccctaagtcctcagcagacttggcatgttcattcccttgacacagctggccatttcccgtccctgaactatgtccttcattggcttctgggaaacctccctgg-----ctgtctcagtctctaacctcttaatgttgaggattggactttattcatctactgtctacacttgtgcccttggggatgccat---ccagtcttgtggtttcgaaaaccgtctatacactgacaactctcaaattt---------------acatctcctccgactctgggtgcctggattcctattcctctctctagctggatgtctatcaaacatcagagatccaccatggcccaaagtgaactcca---catcttcctccccaggagtgtccccagctcagctaaagccaactctttctcttggctgcccagaccacactttgaggccacctttacttctctccttctttcac--cccccatgtcaaatcctggagcagactatgctaactctgtcttcaaaatacacccagaatctgactgcctctccgcactgccattgcatacagctcagtccaggcaccgtcatctctccctgggtgactgcagtGCCCATTAGGGCACACATCTCAGCcttgcatcccattggccaggcaggggcacatgactactccagccatccagtggggaaggagaagtgttctccctgttctgcatggttatggcctcagtgacacccatgcctgctgtttctatggaaaaagaggacaaatgggggcaactggtgcctctgacacaGGGTCCTcttggggagggagattacagggtcaaaatgaggcatttaagctcaaatcagaagaataagaagtaaagacgcatccaaagggcatggaaacagccttctgggcagagggatgaacaaagcacaatgcccctgaggtgagaagaagctgggcatgtgtgaggaatggggcaagggccactgtggctgggggttgagtgggtgcacaggatagggaggaggtgagatggcaaattcaatcaaggcctcagggccatggtatggatttgggatcacgctaaaaaaatagtggcaaggcacaggaggTtt s panTro4.chr1 30536113 1096 + 228333871 acgttgctgaatgcagtatcaaccctaagtcctcagcagacttggcatgttcattcccttgacaaagctggccatgtcccgtccctgaactatgtccttcattggcttctgggaaacctcccagg-----ctgtctcagtctctaacctcttaatgttgaggattggactttattcatctactatctacacttgtgcccttggggatgccat---ccagtcttgtgctttcgaaaaccatctatacactgacaactctcaaattt---------------acatctcctccgactctgggtgcctggattcctattcctctctctagctggatgtctatcaaacatcagagatccaccatggcccaaagtgaactcca---catcttcctccccaggagtgtccccagctcagctaaagccaactctttctcttggctgcccagaccacactttgaggccacctttacttctctccttctttcaccgcccccatgtcaaatcctggagcagactatgctaactctgtcttcaaaatacacccagaatctgactgcctctccgcaccgccattgcatgcagctcagtccaggcaccgtcatctctccctgggtgactgcagtGCCCATTAGGgcacacatctcatccttacatcccattggccaggcaggggcacgtgactactccagccatccagtggggaaggagaagtgttctccctgttctgcatggttatggcctcagtgacacccatgcctgctgtttctatggaagaagaggacaaatgggggcaactggtgcctctgacacaGGGTCCTCTTGGGGagggagattagagggtcaaaatgaggcatttaagctcaaatcagaagaataagaagtaaagaggcatccaaacggcatggaaacagccttctgggcagagggatgaacaaagcacaatgcccctgaggtgagaagaagctgggcatgtgtgaggaatggggcaagggccactgtggctgggggttgattgggtgcacaggatagggaggaggtgagatggcaaattcaatcaaggcctcagggccatggtatggatttgggatcacgctaaaaaaatagtggcaaggcacaggaggttt i panTro4.chr1 C 0 C 0 s rheMac3.chr1 33421898 1106 + 229590362 atgttgctgaatgcagtatcaacccttagtcctcagcagacttggcatgttcattcccttgatacagctggccatgtcccctccctaaaccatgtccttcattggcttctgggaaacctccctggctgtcctgtctcagtctctaacctcttaatgctgaggattggactttattcatctactgtctacacttgtgcccttggggatgccatataacagtcttgtggttttgaaaaccatctatacactgacaactctcaaagttacatctccagcccagacatctcccccaactctgggtacctggattcctattcccctctctagctggatgtctaccaagcatcagagattcatcatggcccaaagtgaactccacatcatcttcctccccaggagtgtccctagctcagctaaagccaactcattctcttggctgtccagaccagacttggaggcca-ctttacttctctccttctttcaccacccccatgtccaatcttggagcagactatgctaactctgtcttcaaaatacacctagaatctgactgcctctcagcaccgccattgcatacagctcagtctaggcactgtcatctctccctgggtgactgcaatGCCCATTAGGgcacacatctcatcctcacatcccactggccaggcatgggcacttgaccaccccagccatccagtggggaaggagcagtgttctccctgatctgcatggttatggtctcagtgacacccacggctgctgtttctatggaagaagaggacaaatgggggcaactggtgcctctgacacaGGGTCCTcttggggagggagataagagggtcaaaatgaggcatttaagctcaaatcagaagaataagaagtaaagaggcatgcaaagggcatggaaacagccttctgggcagaggaatcaacgaagcacaatggccctgaggtgggaagaagctgggcgtgtgtgaagaatggggcaagggccactgtggctgggggacgagtgggtgcacaggacagggaggaagtgagat---------------gGCCTCAGGGCCATGGTACGGATTTGGGATCATGCTGAAAGGATAGTGGCAAGGCAGAGGAGGTTT i rheMac3.chr1 C 0 N 0 s macFas5.chr1 29933497 1103 - 227556264 atgttgctgaatgcagtatcaacccttagtcctcagcagacttggcatgttcattcccttgatacagctggccatgtcccctccctaaaccatgtccttcattggcttctgggaaacctccctggctgtcctgtctcagtctctaacctcttaatgctGAGGAttggactttattcatctactgtctacacttgtgcccttggggatgccat---ccagtcttgtggttttgaaaaccatctatacactgacaactctcaaagttacatctccagcccagacatctcccccaactctgggtacctggattcctattcccccctctagctggatgtctaccaagcatcagagattcatcatggcccaaagtgaactccacatcatcttcctccccaggagtgtccctagctcagctaaagccaactcattctcttggctgtccagaccagacttggaggcca-ttttacttctctccttctttcaccacccccatgtccaatcttggagcagactatgctaactctgtcttcaaaatacacctagaatctgactgcctctcagcaccgccattgcatacagctcagtctaggcactgtcatctctccctgggtgactgcaatGCCCATTAGGgcacacatctcatcctcacatcccactggccaggcatgggcacttgaccaccccagccatccagtggggaaggagcagtgttctccctgatctgcatggttatggtctcagtgacacccacggctgctgtttctatggaagaagaggacaaatgggggcaactggtgcctctgacacaGGGTCCTcttggggagggagataagagggtcaaaatgaggcatttaagctcaaatcagaagaataagaagtaaagaggcatgcaaagggcatggaaacagccttctgggcagaggaatcaacgaagcacaatggccctgaggtgggaagaagctgggcgtgtgtgaagaatggggcaagggccactgtggctgggggacgagtgggtgcacaggacagggaggaagtgagat---------------gGCCTCAGGGCCGTGGTACGGATTTGGGATCATGCTGAAAGGATAGTGGCAAGGCAGAGGAGGTTT i macFas5.chr1 C 0 N 0 s papAnu2.chr1 32696650 1103 + 220367699 ATGTTGCTGAATGCAGTATCAACCCTTAGTCCTCAGCAGACTTGGCATGTTCATTCCCTTGATACAGCTGGCCATGTCCCCTCCCTAAACCATGTCCTTCATTGGCTTCTGGGAAACCTCCCTGGCTGTCCTGTCTCAGTCTCTAACCTCTTAATGCTGAGGATTGGACTTTATTCATCTACTGTCTACACTTGTGCCCTTGGGGATGCCAT---CCAGTCTTGTGGTTTTGAAAACCATCTATACACTGACAACTCTCAAAGTTACATCTCCAGCCCAGACATCTCCCCCAACTCTGGGCATCTGGATTCCTATTCCCCCCTCTAGCTGGATGTCTACCAAGCATCAGAGATTCATCATGGCCCAAAGTGAACTCCACATCATCTTCCTCCCCAAGAGTGTCCCTAGCTCAGCTAAAGCCAACTCATACTCTTGGCTGTCCAGATCACACTTTGAGGCCA-TTttacttctctccttctttcaCCACCCCCATGTCCAATCTTGGAGCAGACTATGCtaactctgtcttcaaaatacACCTAGAATCTGACTGCCTCTCAGCACCGCCATTGCTTACAGCTCAGTCTAGGCACTGTCATCTCTCCCTGGGTGACTGCAATGCCCATTAGGGCACACATCTCATCCTCACATCCCACTGGCCAGGCATGGGCACGTGACCACCCCAGCCATCCAGTGGGGAAGGAGCAGTGTTCTCCCTGATCTGCATGGTTATGGTCTCAGTGACACCCACGGCTGCTGTTTCTATGGAAGAAGAGGACAAATGGGGGCAACTGGTGCCTCTGACACAGGGTCCTCTTGGGGAGGGAGATAAGAGGGTCAAAATGAGGCATTTAAGCTCAAATCAGAAGAATAAGAAGTAAAGAGGCATGCAAAGGGCATGGAAACAGCCTTCTGGGCAGAGGAATCAACGAAGCACAAtggccctgaggtgggaagaagCTTGGCGTGTGTGAGGAATGGGGCAAGGGCCACTGTGGCTGGGGGCCGAGTGGGTGCACAGGACAGGGAGGAAGTGAGAT---------------GGCCTCAGGGCCATGGTACGGATTTGGGATCACGCTGAAAGGATAGTGGCAAGGCAGAGGAGGTTT i papAnu2.chr1 C 0 C 0 s chlSab2.chr20 28212992 1101 - 130588469 atgttgctgaatgcagtatcaacccttagtcctcagcagacttggcatgttcattcccttgacacagctggccatgtcccctccctaaactgtgtccttcattggcttctgggaaacctccctggttgtcctgtctcagtctctaacctcttaatgctGAGGAttggactttattcatctactgtctacacttgtgcccttggggatgccat---ccagtcttgtggttttgaaaaccatccatacactgacaactctcaaagttacatctccagcccagacatctcccccaactctgggtacctggattcctattcccccctctagctggatgtctaccaagcatcagagattcatcatggcccgaagtgaactccacatcatcttcctccccaggagtgtccccacctcagctaaagccaactcattctcttggctgtccagatcacacttggaggcca-ttttacttctctccttctttcaccacccccatgttcaatcctggagcagactatgctaactctgtcttcaaaatacacccagaatctgactgcctctcagcaccaccattgcttacagctcagtccaggcactgtcatctctccctgggtgactgcaatGCCCATTAGGgcacacatcttatcctcacatcccactggccaggcatgggcacgtgaccacccccgccatccagtggggaaggagaagtgttc-ccctgttctgcatggttatggtctcagtgacacccatggctgctgtttctatggaagaagaggacaaat-ggggcaactggtgcctctgacacaGGGTCCTcttggggagggagacaagagggtcaaaatgaggcatttaagctcaaatcagaagaataagaagtaaagaggtatgcaaagggcatggaaacagccttctgggcagaggaatcaacaaagcacaatgaccctgaggtgggaagaagttgggcgtgtgtgaggaatggggcaaggaccactgtggctgggggtcgagtgggtgcacaggacagggaggagatgagAT---------------GGCCTCAGGGCCATGGTACGGATTTGGGATCACGCTGAAAGGATAGTGGCAAGGCAGAGGAGGTTT i chlSab2.chr20 C 0 C 0 a score=546.000000 s hg38.chr1_KI270760v1_alt 106510 1 + 109528 t s panTro4.chr1 30537209 1 + 228333871 t i panTro4.chr1 C 0 C 0 s papAnu2.chr1 32697753 1 + 220367699 T i papAnu2.chr1 C 0 N 0 s chlSab2.chr20 28214093 1 - 130588469 T i chlSab2.chr20 C 0 N 0 a score=272196.000000 s hg38.chr1_KI270760v1_alt 106511 3017 + 109528 ttttttttttactttttttatactttaagttctagggtacatgtgcacaatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttacattaggtatatttcctaatgctatccctccccactcctcccaccccacgacaggccccagtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaatttccacctatgagtgagaacatgcagtgtttggttttttgtccctgtgataatttgctgagaatgatggtttccagcttcatccatgtccctgcaatggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaatatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaattgccacattgtcttccacaatggttgaactattttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttccttttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcataaaggtcttcttttgagaagtgtctgttcatatccttcacctactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttctttgtagattctggatattagccctttgtcagatgagtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtaatttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttgccttttgttgccattgcttttggtgttttagccatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatttaagtctttaatccatcttgaattaattttagtagaaggtgtgaggaagggatccagtttcagctttctacattatggctagccagttttcccagcactattcattaaatagggaatctttccccatttcttatttttgataggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccaagctgttttagttactctagccttgtagtattgtttgaagtcaggtagcatgatgcctccagctttgttcttttggcttaggattgacttggcaatgtgggctctttttaggctccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacaatattgattcttcctatccatgagcatggaatgttcttccatttgtttgtgtcctctttcatttcgccgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggacttcactcatgatttgg----ctgtttgtctgttactggtgtataagaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggcagagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaatatcctttatttccttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagagagcatccctgtcttgtgccagttttcaaagagaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacatcctgtcaatacccaatttattgagagtttttagcatgaagggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttgattctgtttatatgctggattacttttattgatttgtgtatgttgaaccagccttgcatcccaggaatgaagcccacttgatcattgtgtacaagctttttgatgtgctgctggattcggttttccagtattttattgaggatttttgcatcgatattcatcaaggatattggtctaaaatcatctttttgtgtgtatctgccaggctttggaatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcggctgtgaatccatctggtcgtggactttttttggttggtaagctattgattattgccacaatttcagagcctgttatttgtctattcagggattcaacttcttcctggtttagtcttgggagagtgtatgtgtccaggaatttatccatttcttctagatttttctagtttatttgcatggaggtgtttatagtattctctgatggtagtttgtatttctgtgcgatcagtggtgatatcccctttatcattttttattgtatctatttgattcttctctctttcttctttattagtcttgctagtggtctatcaattttgttgatcttttcaaaaaaccagctcctggattcattgatttttttgaagggttttttgtgtctctatctccttcagttctgctcggatC s panTro4.chr1 30537210 3003 + 228333871 tCTttttttttctttttttatactttaagttctagggtacatgtgcacaatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttacattaggtatacctcctaatgctatccctcccccctcctcccaccccacgacaggccccagtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaatttccacccatgagtgagaacatgcagcgtttggttttttgtccctgtgataatttgctgagaatgatggtttccagcttcatccacgtccctgcaatggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaatatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatgcctgggtcaaatggtatttctagttctagatccttgaggaattgccacattgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgattcctgactttttaatgatcaccattctaattggtgtgagatggtatctcattgtggttttgatttccttttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcataaaggtcttcttttgagaagtgtctgttcatatccttcacctactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttctttgtagattctggatattagccctttgtcagatgagtagattgcaaaaattttctcacattctgtaggttgcctgttcactctgatggtaatttctttagctgtgcagaaactctttagtttaattagatcccgtttgtcaattttgccttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatttaagtctttaatccatcttgaattaattttagtataaggtgtaaggaagggatccagtttcagctttctacattatggctagccagttttcccagcaccattcattaaatagggaatctttccccatttcttatt---------tttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctcttctgttccattggtctatatctctgttttggtaccagtatcatgctgttttggttactctagccttgtagtatagtttgaagtcaggtagcatgatgcctccagcttttttcttttggcttaggattgacttggcaatgtgggctctttttaggctccatatgaactttaaagtagttttttccaattctgtgaagaaagtcactggtagcttgatggggatggcattgaatctataaattacctttggcagtatggccattttcacgatattgatttttcctatccatgaacatggaatgttcttccgtttgtttgtgtcctctttcattttgccgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtctgttactggtgtataagaatgcttgtgatttttgcacatcgattttatatcctgagactttgctgaagttgcttatcagctt---gagattttgggctgagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaatatcctttatttccttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagtggtgagagacagcatccctgtcttgtgccagttctcaaagagaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatacatcctgtcaatacctaatttatt--gagtttttagcatgaagggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttgattctgtttatatgctggattacttttattgatttgcatatgttgaaccagccttgcatcccaggaatgaagcccacttgatcattgtgtacaagctttttgatgtgctgctggattcagttttccagtattttatcgaggatttttgcatcgatgttcatcaaggatattggtctaaaatcatctttttgtgtgtatctgccaggctttggaatcaggatgatgctggcctcgtaaaatgagttagggaggattccctctttttctattgattggaatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaattcggctgtgaatccatctggtcgtggactttttttggttggtaagctattgattattgccacaatttcagagcctgttatttgtctattcagggattcaacttcttcctggtttagtcttgggagagtgtatgtgtccaggaatttatccatttattctagatttttctagtttatttgcatggaggtgtttatagtattctctgatggtagtttgtatttctgtgggatcagtggtgatatcccctttatcattttttattgcatctatttgattct----tctttcttctttattagtcttgttagtggtctatcaattttgttgatcttttcaaaaaaccagctcctggattcattgatttttttgaagggatttttgtgtctctatctccttcagttctgctctgatc i panTro4.chr1 C 0 N 0