##maf version=1 scoring=roast.v3.3 a score=475479.000000 s hg38.chr3_KI270781v1_alt 0 802 + 113034 gaattctatattggccctggctttctttctgggggcg-tttctgagtcacagtatggggagatgaagctt----------acacagagcaacacattcttgctgagctcaagaggcagaaattggagtttggtgctgccgaattggctggaatttgcagggcaatacaacagaaa-ggaggatctgcaTGGG-GGTGAGGGTGCTTCCA-GTCTACTTTGGGTTTCTCCAATGACCTTTGGCTGAGGGCTTGGCTGAGCACATGCCAGCA-AGACACCGTGAAGTCTAGAAGAAGGCTGCTAAGAGCTGGATAGGGCTCAGAGCTGGATGGGAATGCCAGAGGTGGCACAGTGTTGGGAGTTCCGGCCAATCCATAGTTAGGAGTAAGGACCATGTTCTGTCTAGAGTAAGGACCAATTCCTAAGACTAAGGACAAAACCAAAACAGACCAAGCCTGCGGGATCAATAAGATCCACTGGTAATTTAACCACCTACCAGAATAAAAGgggcagagt-caaagtcagtaaattaaagaacagacttttccagtgcaaaagctgtgcctaacgaagagctgcaactgtggttacttgcacgtggt-------agcaacac--------agaacctactaacttttggaagaaattttattgccaaagaaaccatggatatggctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatcccctgagg---tcgggagttcgagaccagcct-gccaacatgatgaaaccctgtctctactaaaaatacaaaaattagcagggcatggtggcgggtgc s panTro4.chr3 13749765 802 - 202329955 gaattctacattggccctggctttctttctgggggcg-tttctgagtcacagtatggggagatgaagctt----------acacagagcaacacattcttgctgagctcaagaggcagaaattggagtttggtgctgccgaattggctggaatttgcagggcaatacaacagaaa-ggaggatctgcaTGGG-GGTGAGGGTGCTTCAA-GTCTACTTTGGGTTTCTCCAATGACCTTTGGCTGAGGGCTTGGCTGAGCACATGCCAGCA-AGACACCGTGAAGTCTAGAAGAAGGCTGCTAAGAGCTGGATAGGGCTGAGAGCTGGATGGGAATGCCAGAGGTGGCACAGTGTTGGGAGTTCCGGCCAATCCATAGTTAGGAGTAAGGACCATGTTCTGTCTAGAGTAAGGACCAATTCCTAAGACTAAGGACAAAACCAAAACAGACCAAGCCTGCGGGATCAATAAGATCCACTGGTAATTTAACCACCTACCAGAATAAAAGgggcagagt-caaagtcagtaaattaaagaacagacttttccagtgcaaaagctgtgcctaacgaagagctgcaactgtggttacttgcacgtggt-------agcaacac--------ggaacctactaacttttggaagaaattttattgccaaagaaaccatggatatggctgggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatcccctgagg---tcgggagttcgagaccagcct-gccaacatgatgaaaccctgtctctactaaaaatacaaaaattagcagggcatggtggcgggtgc i panTro4.chr3 N 0 C 0 s nomLeu3.chr11 14286034 802 - 123690457 gaattctacgttggccctggctttctttctgggggcg-tttctgagtcacagtatggggagatgaagctt----------acacagagcatcacattcttgctgagctcaagaggcagaaattggagtttggtgctgccgaattggcaggaatttgcagggcaatgcaacagaaa-ggaggagctgcatgag-ggtgaaggtgcttcaa-atctactttgggtttctccaatgacctgtggctgagggcttggctgagcacgtgccagca-agacaccgtgaagtctagaagaaggctgctaagagctggatagggctgagagctgGACGGGAATGCCAGAGGTGGCACAGTGTTGGGAGTTCCGGCCAATCCATAGTTAGGAGTAAGGACCATGTTCTGTCTAGAGTAAGGACCAATTCCTAAGACTAAGGACAAAACCAAAACAGACCAAGCCTGTGGGATCAATAAGATCCACTGGTAATTTAACCCCCTACCAGAATAAAAGgggcagagt-caaagccagtaaactaaagaacagacttttccagtgcaaaagctgtgcccaacgaagagctgcaactatggttacttgcatgtggt-------agcaacac--------ggaacctactaacttttggaagaaattttattgccaaagaaaccatggatatggctgggtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatcccctgagg---tcaggagtttgagaccagcct-gccaacatgatgaaaccctgtttctactaaaaatacaaaaattagcagggcatggtggtggacgc i nomLeu3.chr11 N 0 C 0 s calJac3.chr15 92355137 784 - 98464013 gaattctccattggccccggctttcttcctggcatcg-tttctgagtcacaggatggggagatggagctt----------acacagagcagcacattcttgctgagctgaagaggcagaaatgggagtttggtgctgctgaattggctgggatttgcagggcaatgcagccgaaa-ggaggagctgcatggg-gatgagggcgcttgaa-gtctacactgggtGTCTCCAACGGCCTTTGGCTGAGGGCTTGGCTGAGCATGTGCCAGTA-AGACACCATATAGTCTAGAAAAAGGCTTCTGAGAGCTGGATAGGACTGAGAGCTGGATGTGAATGCCAGAGGTGG--CAGTGTCGGGAGTTCGGGACAATCCACAGTTAAGAGTAAGGACCGTGTTCTATGTAAAGTAAGGACCGATTCCTAGGACTAAGGACAAAAACAAAACAGACCAAGGCCGACGGATCAATGAGATCCACTGGTGATTTAACCACCTACCAGAACAAAAGGGGCAGAGT-CAaagccagtaaattaaagaacagaattttctag-----------------aagaagcactgcgatgatggttacttgcacgtggt-------cgcagcac--------ggaacctaataactcttggaagaaattttattgccaaagaaaccatggatatggccaggcgcagtggctcaagcctgtaataccaatgctttgggaggccgaggtgggcggatcacctgagg---tcaggtgttcaagaccagcctggccaacatggtgaaaacctgtctctactaaaaatacaaaaattagctgggtgtggtgccgggtgc i calJac3.chr15 N 0 C 0 s canFam3.chr34 24740268 731 - 42124431 gaatcctacattggccctggctttcttcctgggggtactttgtgggtcacagtgcggggagacagcactcccagcgtagagcacggtgtatagcactcttgctgagctgaagaagca------ggaagtcagggatgctaagttggctaggattttcagggcagggtaacaaagatgtgggagctacatgggaaataagggcgctggaaggtctgcactgggcttccacagtagtccttggctaaaagtttggcccagcatgtgcaagtagggacactgtaaggcctagaagaaagtcacT----GCT--ATGGGGATGAGAGCCAAATGGGAACACCAAAGGTTGCATAGTATTGGGAGATGGGGC---------------AGTAAGGACCATGTTT----TAGAGT-AGGAGCGCTCCTCAGGGCTAAGGACAAAATCAAAACAGATCAAGCCTGAGGG-TCAGTAAAATTCGCTAGTAGTTTAACTGCCTTTCGGAACCAATaggacagagtcccaagtgagtaaattaaagaacaaaatgttgctatgtaaaaatcatgcctaaagaagaactttgactatagatacctgctcagggccctgccaggaaacacatggactagaagcctactaactcttggagagaattttatttcagacaaaacaaaacaaa---------------------------aacccca-------------------taagtggggtacctgggtggctcagtggttgagcatctgcctttggatcaggttgtgatcctg--------------------------gggtcctgggatcgagtc- i canFam3.chr34 N 0 C 0 a score=2137763.000000 s hg38.chr3_KI270781v1_alt 802 967 + 113034 ctgtaatcccagctatttgggaggccgaggcaggaggatggcttgaacctgcgagaaagagtttgcagtgagcggagaccacaccattgcactgcagcctggacaacaagagcaaaactccgtctcaaaaaaaaaaaaaa-gaaaaagaaaaagaaaaaaagaaaccacagatatggtctacaaaagcctgggatggttttgactcctaaagtaac-tctagggtccc-----cagacagcacaggctgaaagaggttgtggaa-cctatgagctcccccttcctcaaaggatatagtctccagtgcccacttgagatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcccgtcctctctggggccagtggacaagggacttgctcccagacagcgatgccagtg--gtgactcca-tgcaagggaagggagtcttt--------------gtaggatctcattatcgctatgaaccagtgactaatgcatgttttccgttcttcccttttctga----aag-tttttattagttatcctgttccttctcccccagcgcatactgggtt--tatatgtcataagaagcaagagaagtaacttttcttttggtttataggtcagcagagagag--agtcacatctggacc-tttgggagaggatc----------cagagagtctgcactttgcacagatgccatcactgtagacctgtcttccttggggaggagcaagtgtgttctgtgagtgagacagacggacatttgggtggcTGccc---aggctcctttccagctggatgtagcaaagttacctagttctagacaatggaatgggagcatatgtgatgtg---------tgctacttccgggtcatgctcttaaagggaatcgggaggagtttgtc-ttgatttattgttttccctcttcccaccagctagaatccaaacataatgataggagctacagcaggtatcttagagcacgagctagaagtcccacg s panTro4.chr3 13750567 968 - 202329955 ctgtaaacccagctatttgggaggccgaggcaggaggatggcttgaacctgggagaaagagtctgcagtgagcggagaccacaccattgcactgcagcctggacaacaagagcaaaactccgtctcaaaaaaaaaaaaaaagaaaaagaaaaagaaaaaaagaaaccacagatatggtctacaaaagcctgggatggttttgactcctaaagtaac-tctagggtccc-----cagacagcacaggctgaaagaggttgtggaa-cctatgagctcccccttcctcaaaggatatagtctccagtgcccacttgagatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcctgtcctctctggggccagtggacaagggacttgctcccagacagcgatgccagtg--gtgactcca-tgcaagggaagggagtcttt--------------gtaggatctcattattgctatgaaccagtgactaatgcgtgttttccgttcttcccttttctga----aag-tttttattagttatcctgttccttctcccccagcgcatactgggtt--tatatgtcataagaagcaagagaagtaacttttcttttggtttataggtcagcagagatag--agtcacatctggacc-tttgggagaggatc----------cagagagtctgcatttcgcacagatgccatcactgtagacctgtcttccttggggaggagcaagtgtgttctgtgagtgagacagatggacatttgggtggcTGccc---aggctcctttccagctggatgtagcaaagttacctagttctagacaatggaatgggagcatatgtgatgtg---------tgctacttccgggtcatgctcttaaagggaatcgggaggagtttgtc-ttgatttattgttttccctcttcccaccagctagaatccaaacataatgataggagctacagcaggtatcttagagcacgagctagaagtcccacg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14286836 960 - 123690457 ctgtaatcccagctacttgggaggccaaggcaggagaatggcttgaacctgggaggcggagtttgcagtgagccgagaccacaccattgcactgcagcctgggcaacaagagcaaaactccgtctcaaaagaaaaagaaa---------aaaaagcaaaaaaagaccacagatatggtctacaaaaacctgggaaggttttgactcctaaagtaac-tctagggtccc-----cagacagcacaggcagaaagaggttgtggaa-cctatgagctctccctcccccaaaggatatagtctccagtgcccacttgagatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcctgtcctctctagggccggtggacaagggacttgctcccagacagcgacgccagtg--gtgactcca-cgcaagggaagggagtcttt--------------gtaggatctcattatcgctattagccagtgactaatgtgtgttttccgttcttcctttttctga----aagttttttattagttatcctgttccttctcccccagcgcacactgggtt--tatatgtcatgagaagcaagagaagtaacttttcttttggtttataggtcagcagagatag--agtcacatctgaacc-tttgggagaggacc----------cagagagtctgcactttgcacagatgccgtcactgtagatctgtcttccttggggaggagcaagtgtgttctgtgagtgagacagatggacatttgggtggcTGccc---agcctcccttccaactggatgtagcaaagttaccaagttctagacaatggaatgggagcatatgtaatgtt---------tgtgacttccaggtcatgctcttaaagggaatagggaggagtttgtc-ccgatttattgttttccctcttcccaccagctagaatccaaacataatgataggagctacagcagtcatcttagagcacgagctagaagtcccaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103574131 893 + 192599291 ctgtaatcccagctacttgggaggccgaggcaggagaatgacttgaacctgggaggcagagttttcagtgagccgagatcacgccattgcactgcagcctgggcaacaacagcaaaactacatt---taaaaaaaaaaaa-gaaaagaaaaaagaaaaaaagaaaccacagatatggtctacaacagcctgggttggttttgactcctaaagtaac-tctagggtccc-----cagacagcacgggcagaaagagcttatgaga-cctatgagctccccctcccacgaaggatgtagtctccagtgcccacttgggatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcctgtcctctctggggccagtggacaaggggtttgctcccagacagcgacgccaatg--gtgactcca-tgcaagggaagggagtcttt--------------gtaggatctcgttatcgctacggaccagtgactaatgcgtgttttctgttcttcccttttctga----aag-tttttattagttatcctgttccttctaccccagtgcatactgtgtt--tatgtgtcatgagaagcaagagaagtgacttttcttttggtttataggtcggcagagatag--agtcacatgtggacc-tttgggagaggacc----------cagagagtctgccctttgcactgatgccatcactgtagacctg--ttccttggggaggagcaagtgtgttctgtaggtcagacagatggACA--------------------cctcccttccagctggatgtagcaaagttacctagttctagacaatggaatgggagcatatgtgatgtg---------tgtgacttccaggtcatgctcttaaagggaataaggaggaatttgtc-ttgatttattgttttccttcttcccact----------------------------------------------------agctagaaGTCCTACA i rheMac3.chr2 N 0 C 0 s macFas5.chr2 103210713 892 - 192460366 ctgtaatcccagctacttgggaggccgaggcaggagaatgacttgaacctgggaggcagagttttcagtgagccgagatcatgccattgcactgcagcctgggcaacaaaagcaaaactacatt--aaaaaaaaaaaaaa-gaaaagaaaaaagaaaaaaagaaaccacagatatggtctacaacagcctgggttggttttgactcctaaagtaac-tctagggtccc-----cagacagcacgggcagaaagagcttatgaga-cctatgagctccccctcccacgaaggatgtagtctccagtgcccacttgggatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcctgtcctctctggggccagtggacaaggggtttgctcccagacagcgacgccaatg--gtgactcca-tgcaagggaagggagtcttt--------------gtaggatctcgttatcgctacggaccagtgactaatgcgtgttttctgttcttcccttttctga----aag-tttttattagttatcctgttccttctaccccagtgcatactgtgtt--tatgtgtcatgagaagcaagagaagtgacttttcttttggtttataggtcggcagagatag--agtcacatctggacc-tttgggagaggacc----------cagagagtctgccctttgcactgatgccatcactgtagacctg--ttccttggggaggagcaagtgtgttctgtAGGTCAGACAGATGGACA--------------------cctcccttccagctggatgtagcaaagttacctagttctagacaatggaatgggagc--atgtgatgtg---------tgtgacttccaggtcatgctcttaaagggaataaggaggaatttgtc-ttgatttattgttttccttcttcccact----------------------------------------------------agctagaaGTCCTACA i macFas5.chr2 N 0 C 0 s papAnu2.chr2 101012046 887 + 187378091 ctgtaatcccagctacttgggaggccgaggcaggagaatgacttgaacctgggaggcagagttttcagtgagccgagatcacgccattgcactgcagcctgggcaacaaaagcaaaactacatt--taaaaaaaaaaaaa-gaaaagaaaaaagaaaaaaagaaaccacagataTGGTCTACAACAGCCTGGGTTGGTTTTGACTCCTAAAGTAAC-TCTAGGGTCCC-----CAGACAGCACAGGCAGAAAGAGCTTATGAGA-CCTATGAGCTCCCCCTCCCACAAAGGATGTAGTCTCCAGTGCCCACTTGGGATGTGGCCAGAAAAAACAACTGACAGAGAATAACCTCCCAGAAAACAAGCCTGTCCTCTCTGGGGCCAGTGGACAAGGGGTTTGCTCCCAGACAGCGACGCCAATG--GTGACTCCA-TGCAAGG--AAGGAGTCTTT--------------GTAGGATCTCGTTATCGCTACGGACCAGTGACTAATGCGTGTTTTCTGTTCTTCccttttctga----aag-tttttattaG-TATCCTGTTCCTTCTACCCCAGTGCATACTGTGTT--TATGTGTCATGA-AAGCA--GAGAGTGACTTTTCTTT--GGTTATAGGTCGGCAGAGATAG--AGTCACATCTGGACCTTTTGGGAGAGGACC----------CAGAGAGTCTGCCCTTTGCACTGATGCCATCACTGTAGACCTG--TTCCTTGGGGAGGAGCAAGTGTGTTCTGTAGGTCAGACAGATGGACA--------------------TCTCCCTTCCAGCTGGATGTAGCAAAGTTACCTAGTTCTAGACAATGGAATGGGAGCATATGTGATGTG---------TGTGACTTCCAGGTCATGCTCTTAAAGGGAATAAGGAGGAATTTGTC-ttgatttattgttttccttcttcccaCT----------------------------------------------------AGCTAGAAGTCCTACA i papAnu2.chr2 N 0 C 0 s chlSab2.chr15 4879770 916 + 91754291 ctgtaatcccagcttcttgggaggccaaggcaggagaatgacttgaactt-ggaggcagagtttgcagggagccgagatcacgccattgcactgcagcctgggaaacaaaagcaaaactacgttt-aaaaaaaaagaaaa-gaaaagaaaaaagaaaaaaagaaaccacagatacggtctacaacagcctgggatggttttgactcctaaagtaac-tctagggtccc-----cagacagcacaggcagaaagagcttatgagaccctatgagcttcccttcccacgaaggatgtagtctccagtgcccacttgggatgtggccagaaaaaacaactgacagagaataacctcccagaaaacaagcctgtcctctctggggccagtggacgaaggatttgctcccagacagcgacgccaatg--gtgactcca-tgcaagggaagggagtcttt--------------gtaggatctcattatcgctatggaccagtgactaatgcgtgttttctgttcttcccttttctga----aag-tttttattagttatcctgttccttctaccccagtgcatactgtgtttatatgtgtcatgagaagcaagagaagtgacttttcttttggtttataggtcggcagagatag--agtcacatctggacc-tttgggagaggacc----------cagagagtctgccctttgcactgatgccatcactgtagacctgtcttccttggggaggagcaagtgtgttctgtgggtcagacagacggacatttgggtggcTGTcc---agcctcccttccagctggatgtagcaaagttacctagttctagacaatggaatgggagcatatgtgatgtg---------tgtgacttccaggtcatgctcttaaagggaataacaaggaatttctc-ttgatttattgttttccttcttcccact----------------------------------------------------agctagaaGTCCTACA i chlSab2.chr15 N 0 C 0 s calJac3.chr15 92355921 933 - 98464013 ctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagagattgcagtgagctgagatcacaccattgcactgtagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaagaaa---------------------gaaaccacagatatggtctaccaaagcttgggatggtttatactcctaaagtaacttctagagtttg-----caaacagcagagacagaaagaggttgtgaaa-tctatgagc-ccccctaacccaaaggacacagtcttcagtgcccacttgcaatgtggccagaaaaaacaagtgacagagaaaaacctcccagaaaacaagcctatcctctctgggcccagtggacaagggagttgctcccctaaggcgacgccagtg--gtgactccgctgcagggaaaggga--cttt--------------gcaggatctcattgtcgctatgaatcagtgaccaat-cgtgttttctattcttccttttcctga----aag-tttttatgagttatcctgttccttctccctcagtgcatactgcgct--tatatgtcacgagaagcaaaagaagtaacttttcttttggtttataggtc-gcagagatgg--agtcacatctggacc-gttgggaggggacc----------cagagagtatgtgctttgtgctgatac-----------agctatcttccttggggaggagcaggtgtgttctctgggtgACACAGATGGACAGTTGGGTGGCTGccc---agcctcccgtccagctgggtgtagtagagtgacctagttctagacaatggaatgggagcatatgtgatatg---------tgtgacttccaggtcatgctctgaaagggcataggaagaagtttgcc-ttgatttattgctttccctcttctcaccagctagaatccaaacataatgaaaggagctccagcagtcctcttcagccatgagctagaattcccacg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24740999 884 - 42124431 ctgca-----------ttgggctcccc--gcaggaagcctgcttatccct------------ctgc------------ctatgtctctgc-ctctctcatgaataaataaatc----------tttaaaaaaaaaaaaaa---------------------------gtaagtgtgacctaaaatatcctgtgattgtattgattcctaaa------cagagggtcctcccaacaggcaccagaag-aaaaaaaggctgtgaga-tctacaagtctccct------aaagggtacactctctgatgtccactcaggatgaggccagggaggaaaataaatatggaaaaatcctgccaaaaactagcctatcctctctggggtcaatggacaagtg---------------gcgat-ccaacgcactaactccactatgagagaagggagtgtttgtgactcctgtatggtaggatttgatcattgctatgaactagtgacaaataagtgttttccattcttccattttctgaatggaag-atcccattattcatccaatttcttttccattggtgcatattgggta--tgtgtgtcactggaagtagaggaggtaattttcctctt-gcttataagtcactagacataattagttgcatctggacc-tggaggagaggaccctgcagcactcagggaccctgaactctgagc-----------------------------tggaGAAGGGCAAGTGTGTTCTGTGGGTAAGAT--ATGGGTATTTGGCTCTCCAGCTGAAaacctaccttgcagccaggtgtagcaatgtgacctagttctggaaaagagtatgggagcatatgtgatgtgctcatgtgatgtgactcccaggtcatgcccttagagggaatggggtagggtgtgcctttgatatattgttgtccttcttcccattagttggaatgcatacatgttggcaggagctagaataaacgccttaggccctgagacagaagtcacatg i canFam3.chr34 C 0 I 36 a score=729155.000000 s hg38.chr3_KI270781v1_alt 1769 340 + 113034 ttgcgaaaagcacatagagcttcagtccctgaccccatccagctgcc--------atgcctagtctgcattgcccaccacctggcctgttt-tttgtt----tttttgttt-t-----------------tttgtttttgagacacagtctcactctgtcatccaggctggagtgcagtgctgcgatctcggctcactgcaacctccatctcctgggttcaagcgattctcgtgcctcagcctccagagtagctggtgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagagggggttttgccatgttggccaggctggtctcgaacccctgacctcaagtgatctgcct s panTro4.chr3 13751535 340 - 202329955 ttgtgaaaagcacatagagctccagtccctgaccccatccagctgcc--------atgcctagtctgcattgcccaccacctggcctgttt-tttgtt----tttttgttt-t-----------------tttgtttttgagacacagtctcactctgtcatccaggctggagtgcagtgctgcgatctcggctcactgcaacctccatctcctgggttcaagcgattctcgtgcctcagcctccagagtagctggtgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagagggggttttgccatgttggccaggctggtctcgaacccctgacctcaagtgatctgcct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14287796 358 - 123690457 ttgcaaaaagcacatagagcttcagtccctgaccccatccagctgcc--------atgtctagtctgcattgcccaccacctggcctgtgt-tttgttttgctttttgttt-tttgtttcttgttttttgtttttttttgagacagagtctcactctgtcatccaggctggagtgcagtgctgcgatcttggctcactgcaacctccacctcctgggttcaagagattctcatgcctcagcctcccgagtagc---tgggattacaggcatgcgccaccacgcctgactaatttttgtatttttagtagagagggggttttgccatgttggccaggctggtctcggacccttgacctcaagtgatctgcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103575024 347 + 192599291 TTGCAAAAAGCACATAGAGCTTCAGTCCCTCACCCCATCCAGCTGCCATCCCCAGATGCCCAGTCTGCATTGCCCACCACCTGGCCtgtttttttgtt----tgtttgtttgt-----------------ttgttttttgagacagagtctcactctgtcatccaggctggagtgcagtgctgtgatctcagctcactgcaaactccacctcccgggttcaagtgattctcatgcctcagcctcccaagtagc---caggattacaggcatgcgccaccacacctggctaatctttgtatgtttagtagagagggggttttgccctgttggccaggctggtcttgaacccctgacctcaagtgatctgcct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103211605 347 - 192460366 TTGCAAAAAGCACATAGAGCTTCAGTCCCTCACCCCATCCAGCTGCCATCCCCAGATGCCCAGTCTGCATTGCCCACCACCTGGCCTGtttttttgtt----tgtttgttcat-----------------ttgttttttgagacagagtctcactctgtcatccaggctggagtgcagtgctgtgatctcagctcactgcaaactccacctcccgggttcaagtgattctcatgcctcagcctcccaagtagc---caggattacaggcatgcgccaccacacctggctaatctttgtatgtttagtagagagggggttttgccctgttggccaggctggtcttgaacccctgacctcaagtgatctgcct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101012933 343 + 187378091 TTGCAAAAAGCACATACAGCTTCAGTCCCTCACCCCATCCAGCTGCCATCCCCAGATGCCCAGTCTGCATTGCCCaccacctggcctgtttttttgtt----tgtttg----t-----------------ttgttttttgagacagagtctcactctgtcatccaggctggagtgcagtgctgtgatctcagctcactgcaacctccacctcctgggttcaagtgattctcgtgcctcagcctcccaagtagc---caggattacaggcatgcgccaccacacctggctaatctttgtatgtttagtagagagggggttttgccatgttggccaggctggtcttgaacccctgacctcaagtgatctgcct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4880686 339 + 91754291 TTGCAAAAAGCACATAGAGCTTCAGACCCTGACCCCATCCAGCTGCCATCCCCAGATGCCCAGTCTGCATTGCCCACCACCTAGCCTGtttgtttgtt----tg--------t-----------------ttgttttttgagacagagtctcactctgtcatccaggctggagtgcagtgctgtgatctcagctcactgcaacctccacctcccgggttcaagtgattctcgtgcctcagtctcccaagtagc---caggattacaggcatgcaccaccacacctggctaatctttgtatgtttagtagagagggggttttgccatgttggccaggctggtcttggacccctgacctcaagtgatctgcct i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92356854 320 - 98464013 tgatgaagaacacatagagct-cggtccctga-cccatccagctgct--------gtgcccagtctgcatcgcccaccacctggcct-----tttttt----t---------t-----------------tttttttttgagacagagtctcgctctgtcatccaggctggagtgcagcggtgcaatctcagctcactgcaacctccaccttctggcttcaagtgattcttgtgccccagcctcccgagtagt---taggattacatgcacaggccacca-gctgggctcatttttgcatttttaat--agagggggttttgccatgttggccaggctggtctcaaactcctgacctcaagtgagctgcct i calJac3.chr15 C 0 C 0 e canFam3.chr34 24741883 36 - 42124431 I a score=191843.000000 s hg38.chr3_KI270781v1_alt 2109 83 + 113034 gccccggcctcccaaagttctgggattacaagtgtgagctactgcgcccagcccacctgcacttttatctgagagagaaacca s panTro4.chr3 13751875 83 - 202329955 gccctggcctcccaaagttctgggattacaagtgtgagctaccgcgcccagcccacctgcacttttatctgagagagaaacca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14288154 83 - 123690457 acctccgcctcccaaaattctgggattacaagcgtgagctgctgtgcccagcccagctgcatttttatctgagagagaaacca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103575371 81 + 192599291 gccttggcctcccaaagttctgggattacaatcgtgagctactgtgcccagccCACCCGCACTTTTATCTGAGAGACAAAC-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103211952 81 - 192460366 gccttggcctcccaaagttctgggattacaatcgtgagctcctgtgcccagccCACCCGCACTTTTATCTGAGAGAGAAAC-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101013276 81 + 187378091 gccttggcctcccaaagttctgggattacaatcgtgagctactgtgcccagcccacccaCACTTTTATCTGAGAGAGAAAC-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4881025 81 + 91754291 gccttggcctcccaaagttctgggattacaatcgtgagctactgtgcccagccCACCCGCACTTTTATCTGAGAGAGAAAC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92357174 83 - 98464013 gccttggcctcccaaagtgctgggattacaagcgcaagccactacacccagtccccctgcacttttatctgagagagaaacca i calJac3.chr15 C 0 I 370 s canFam3.chr34 24741919 71 - 42124431 gtcctgaccttctcaagtt-----gtcacagaag------act-tgcactgctcacctggacttccatctgaaagagaatcca i canFam3.chr34 I 36 C 0 a score=1993749.000000 s hg38.chr3_KI270781v1_alt 2192 855 + 113034 gctcctattttttaagccacCAT-CTTCAAGATCTTTTTGTTGCGGCTACCCGACCCATGATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttagctggtctagtggtgaaggtgaa-gaacaggcctcagttcctgagcacagattcatgtgctgccctatacctcctctgatttctgTAGCCA-GTTTCATGTTGACCCCATCACAGG---GCATGAATCTCGCTGACATCTGTTGCTTACGTTGATAGCTGAGAAACT-----------CTAGCT-CCTCCGAGTCCAGGGGTCCTTTCAATTGATTCTTCTCCACTTTGGTCCTACTACTGTGCTT-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCCGTCAACTATAGGGTCACCTCTCCTCACAGAAGCTCTTCCCCTGCAAGAGTATCCAGGAAATT-CTCGACACTTTTCATGCCAATGAA---------------TGGGCAGCTAATTGTTGGTCTTGTCTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGCAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAACAGAGTCAGAGGCTTCTCTTCTGCTTTCGGTGTTTCTTTCAATCTGCCTGTGTCTAGAA--CTGGGGCTGTCAGGACACA--TCTCTCA-CAACTGCTt----------------------------------------ctccctgctccatcttcctcttcccccttccatcttcctcctcccccctccatcttcctcctcccccctccatcttcctcct-ccCC--CTACAACCCTCCCAG-GGAAGGGGGGGCA-----TTTTTCCACTTCCTCTTGATAGCGCATCTC-CCATGTGGACTTTCATGATT s panTro4.chr3 13751958 854 - 202329955 gctcctattttttaagccacCAT-CTTCAAGATCTTTTTGTTGCGGCTACCCTACCCATGATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttagctggtctagtggtgaaggtgaa-gaacgggcctcagttccTGAGCACAGATACATGTGCTGCCCTATACCTCCTCTGATTTCTGTAGCCA-GTTTCATGTTGACCCCATCACAGG---GCATGAATCTCACTGACATCTGTTGCTTACATTGATAGCTGAGAAACT-----------CTAGCT-CCTCCGAGTCCAGGGGTCCTTTCCATTGATTCTTCTCCACTTTGGTCCTACTACTGTGCTT-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCCCTCAACTATAGGGTCACCTCTCCTCACAGAAGCTCTTCCCCTGCAAGAGTATCCAGGAAATT-CTCGTCACTTTTCATGCCAATGAA---------------TGGGCAGCTAATTGTTGGTCTTGTCTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGCAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAGCAGAGTCAGAGGCTTCTCTTCTGCTTTCGGTGTTTCCTTCAATCTGCCTGTGTCTAGAA--GTGGGGCTGTCAGGACACA--TCTCTCA-CAACTGCTT----------------------------------------CTCCCTGCTCCAtcttcctcttcccccctccatcttcctcctcccccctccatcttcctcctcccccctccatcttcctcct-cccc--ctACAACCCTCCCAG-GGAA-GGGGGGCA-----TTTTTCCACTTCCTCTTGATAGCGCATCTC-CCATGTGGACTTTCATGATT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14288237 898 - 123690457 gctcctattttttaagccacCAT-CTTCAAGATCTTTTTATTGTGGCTACCCTACCCATGATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttagctgggctagtggtgaaggtgaa-gaaggggcctcagttccTGAGCACAGATACATGTGCTGCCCTATACCTCCTCCGATTTCTGTAGCCA-GTTTCTTATTGACCCCATCACAGG---GCATGAATCTCGCTGACATCTGTTGCTTGCATTGATAGCTGAGAAACTC------TTTCCTAGCT-CCTCCGAGTCCAGGGGTCCTTTCCATTGATTCTTCTCCAATTCGGTCCTACCA---TGCTG-GA-TCCCCCTCAGGG---------AACTTCCATTAGACTCCCAGCCTGAGTGACCATCCAGCCCTCAACTGTAGGGTCACCTCTCCTCACAGAAGCTCTTCCTCTGCAAGAGTATTCAGGGAATTACTGGACACTTTTCATGCCAACGAA---------------TGGGCAGCTAATTGTTGGTCTTGTCTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGCAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAACAGAGTCAGAGGCCTCTCTTCTGCTTTCGGTGTTTCCTTCAATCTGCCTGTGTCTAGAA--CTGGGGCTGTCAGGACACA--TCTCTCA-CAACTGCTTCTCCCCTCTCCATCTTCCTCCTCCCCGCTCCATCTTCCTCCTCCCCGCTCCATCTTCCTCCTCCCCCCTCCATCTTCCTCCTCCCCCCTCCATCTTCCTCCTCCCCCCTCCATCTTCCTCCTCCCCC--CCACAACCCTCCCAG-GGAA-GGGGGGCA-----TTTTTCCCCTTCCTCTTGATAGCACATCTC-CCATGTGGACTTTCATGATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103575452 786 + 192599291 -CTTCTATTTTTTAAGCCACCAT-CTTCAAGATCTTTTTGTTGCAGCTATGCTACCCATAATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttaactggtctggtggtgaaggtgaa-gaagggacctcagttccTG-GAACAGATACATGTGCTGCTCTATACCACCTCCGATTTCTGTAGCCA-ATTTCTTGTTGACCCCATCAGAGG---ACATGAATCTCGCTGGCATCTGTTGCTTACATTAATAGCTGAGAAACTC------TTTCCTAGCT-CCTCCAAGTCCGGGGGTCCTTTCCATTGATTTTTCTCCACTTCGGTCCTACTG---TGCTA-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCTCTCAACTATAGGGTCACCTCTCCTCACATAAGCTCTTCCTCTGCAAGAGTATCCAGGAAATT-CTGGACATTTTTCATGCCAATGAA---------------TGGGCATCTAA------GTCTTGTGTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGAAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAACAGAGTCAGAGGCCTCTCTTCTGCTTTCGGTGTTTCCTTCAATTTAAC--TGTCTAGAA--TTGGGGCTGTCAGGACACA--TCTCTAA-CAACTGCTT----------------------------------------------------------------------------------------------------CTCCTACCTCCATCTTCCTCCT-CTCC--CAACAACCCTCCCAG-GGAA-GGGTGGCA-----TTTTTCCACTTCCTCTTGATAGCGCATCTC-CCATGTGGACTTTCATGATT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103212033 786 - 192460366 -CTTCTATTTTTTAAGCCACCAT-CTTCAAGATCTTTTTGTTGCAGCTATGCTACCCATGATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttaactggtctggtggtgaaggtgaa-gaagggacctcagttccTG-GAACAGATACATGTGCTGCTCTATACCACCTCCGATTTCTGTAGCCA-ATTTCTTGTTGACCCCATCAGAGG---ACATGAATCTCGCTGGCATCTGTTGCTTACATTAATAGCTGAGAAACTC------TTTCCTAGCT-CCTCCAAGTCCGGGGGTCCTTTCCATTGATTTTTCTCCACTTCGGTCCTACTG---TGCTA-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCTCTCAACTATAGGGTCACCTCTCCTCACATAAGCTCTTCCTCTGCAAGAGTATCCAGGAAATT-CTGGACATTTTTCATGCCAATGAA---------------TGGGCATCTAA------GTCTTGTGTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGAAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAACAGAGTCAGAGGCCTCTCTTCTGCTTTCGGTGTTTCCTTCAATTTGCC--TGTCTAGAA--TTGGGGCTGTCAGGACACA--TCTCTAA-CAACTGCTT----------------------------------------------------------------------------------------------------CTCCTACCTCCATCTTCCTCCT-CCCC--CAACAACCCTCCCAG-GGAA-GGGTGGCA-----TTTTTCCACTTCCTCTTGATAGCGCATCTC-CCATGTGGACTTTCATGATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101013357 787 + 187378091 ----CTATTTTTTAAGCCACCAT-CTTCAAGATCTTTTTGTTGCAGCTACTCTACCCATGATCTCAGCTT-----ATCCTCCTCCTGCTGCTTATTCTCTGAGATGGCATTTGGG-GTGTGGGAGGTGGGTCTTAGCTGGTCTGGTGGTGAAGGTGAA-GAAGGGAcctcagttcctg-gcacagaTACATGTGCTGCTCTATACCACCTCCGATTTCTGTAGCCA-ATTTCTTGTTGACCCCATCAGAGG---ACATGAATCTCGCTGGCATCTGCTGCTTACATTGATAGCTGAGAAACTC------TTTCCTAGCT-CCTCCAAGTCCGGGGGTCCTTTCCATTGATTCTTCTCCACTTCGGTCCTACTG---TGCTC-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCTCTCAACTATAGGGTCACCTCTCCTCACATAAGCTCTTCCTCTGCAAGAGTATCCAGGAAATT-CTGGACACTTTTCATGCCAATGAA---------------TGGGCATCTAA------GTCTTGTGTCTAGGCGCCTA-ATAGGCAGACAGATTGATACAGGGAAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATTGAAACAGAGTCAGAGGCCTCTCTTCTGCTTTCGGTGTTCCCTTCAATTTGCC--TGTCTAGAA--TTGGGGCTGTCAGGACACA--TCTCTAA-CAACTGCTT----------------------------------------------------------------------------------------------------CTCCTACCtccatcttcctcct-cccc--caacaACCCTCCCAG-GGAA-GGGTGGCA-----TTTTTCTACTTCCTCTTGATAGCGCATCTC-CCATGTGGACTTTCATTATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4881106 785 + 91754291 -CTTCTATTTTTTAAGCCACCAT-CTTCAAGATC-TTTTGTTGCAGCTATGCTACCCATGATCTCAGCtc-----atcctcctcctgctgcttattctctgagatggcatttggg-gtgtgggaggtgggtcttaactggtctggtggtgaaggcgaa-gaagggacctcagttccTG-GAACAGATACATGTGCTGCTCTATACCACCTCCGATTTCTGTAGCCA-ATTTCTTATTGACCCCATCAGAGG---ACATGAATCTCGCTGGCATCTGTTGCTTACATTGATAGCTGAGAAACCC------TTTCCTAGCT-CCTCCGAGTCCGGGGGTCCTTTCCATTGATTCTTCTCCACTTCGGTCCTACTG---TGCTC-GA-TCCCCCTCAGGG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCTCTCAACTATAGGGTCACCTCTCCTCACATAAGCTCTTCCTCTGCTGGAGTATCCAGGAAATT-CTGGACACTTTTCATGCCAATGAA---------------TGCGCATCTAA------GTCTTGTGTCT----GCCTA-ATAGGCAGACAGATTGATACAGGGAAGGTACCTGGTGAGGCTTCTCTTCCCGGAAGCCCAAATTGAAACAGAGTCAGAGGCCTCTCTTCTGCTTTCGGTGGTTCCTTCAATTTGCC--TGTCTAGAA--TCGGGGCTGTCAGGACACA--TCtctaa-caactgctt----------------------------------------------------------------------------------------------------ctcctacctccatcttcatcct-cccc--ccacaaccctcccag-ggaa-gggtggca-----tttttccacttcctcttgatagtacatctc-ccatgtggactttcatgatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92357627 788 - 98464013 GCTCCTATTTTTTAATCCACTAC-ATTCAGGATATTTTTGTTGCAGCCACCCTACCCATGACCTCAGctc-----gccctcctcctgccgcttattctctgagatggcatttggg-gtatgggaggtgggtctcagctggtctggtggtgaaggtgac-aaaggggcctcagctcctgggcacagatgcatatgctgccctgtagctcctctgattgctgtagcca-gtttcttgtcgaccccatcacagg---gc-tgaggctcgctgGCATCTGCTGCTTACGTTGATAGCTGAGAAACTC------TTTCCTGGCT-CCTCGGAGTCCAGGGGTCCTTTCCATTGATTCTTCTCCACTTTGGTTCTACCG---TGCTC-AACTCCCGCTCGCTG---------AACTTCCATTAGGCTCCCAGCCTGAGTGACCACCCAGCCCTCAACTATAGGGCCACCTCTCCTCACATAAGCTCTTTCTCTGCAAGAGTATCCAGGAAATT-CTGGACACGTTTTATGCCAGCGAA---------------CAGGCA--TAATTGTTGGTC-----TCT----GCCTG-ATAGGCGGACAGATTGATACAGGGCAGGTACCTGGTGAGGCTTCTCTTCCCAGAAGCCCAAATGGAAACAGAGTCAGAGGCCTCTCTTCTGCTTT-GGTGTTTCCCTCAATCTGCC--TGTTTAGAA--CTGCAGCTGTCAGGACACA--TCTCTCA-CAACCGCTT----------------------------------------------------------------------------------------------------CTCCTACCTCCACCTGTCTCCT-CCTCCACAACAAATCCCCAGG-AAAG-AAGTGGCA-----TTTGTCCACTTCCTCTTGATGGCACATCTC-CGATGTGGACTTCTATGATT i calJac3.chr15 I 370 C 0 s canFam3.chr34 24741990 830 - 42124431 gcttctattttttaagccaccatattttAATATCTTTTTGTTATGGTTACCCTACCTACTATTTTAACCCTTATATTCCTCCCCTTCCTATTAGTTCTCGGAGATGGCATATGGGTACACGGGAGATGGGGCTT--CTAATGTGGT--TAAAGGTGAAGGAGGGGGGCTACGTTCCTGAGCACAGGTCCTTGGACAGCTCCATAGCTCCTCCAATTTCTGTAACCATACTTCTTGTTGACCTGGTCACTGGTCAACAAGCATCTTGCTGACATTCATTGCTTACATTTATAACTAAGAAAGTCAAGATTTTTCTTAGCTCCCTTGGAGTCCAGAGGTCCTTGCAATGGATTCTTCTCCACTTGGGCCCCACAG--GTGCCCTGA-ATCACCTCGAGGCTTGGCTTCAACTCCC-TTTGGCTCCCAGCCTGGGTGACTTCCCAATCCTCACATATAGGGCC---------------AGATTTTCCTTCCCAAGGGTATCCAGGAAACT-CTGGACATCTTTCATGCCAATGAATGCCAGGAAAGACTCTGGGTAGCCAAATGCTGGTCTTCTCTCT----GCCTACCTAGGCAA--AGTTTACTCGGGGACAGGTACCTTGTGAGGTTTCTCTTTTCATAATCCTGAACTGGAACAGGGTCAGAAGCCTCTCTTCTGCTGTCAATGTTTCTTTCTATCCACC--TGTCTGTAACTTTGGGAGGGTTGGGACACAAGTCTCTCACCAACTGCTT----------------------------------------------------------------------------------------------------CTCCTATTACCATCTTTCTCTT-CCTT--CCCCAATCCTTGGGGTGTAA-GGGGTGCAGCTATTTATCCCCCTTCCTCTTGGTAGTAATTCTCTCTGTGTAGATGTTTACAATC i canFam3.chr34 C 0 C 0 a score=510546.000000 s hg38.chr3_KI270781v1_alt 3047 226 + 113034 AAATCTACCAAGGTTggccaggtgcggcggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaagtcaggagttccagaccagcctgacccacatagcgaaaccgcatctctactaaaataaaaattagccaggcatggtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacgtgggtggc s panTro4.chr3 13752812 226 - 202329955 AAATCTACCAAGGTTggccaggtgcggcggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaagtcaggagttccagaccagcctgacccacatagcaaaaccgcatctctactaaaataaaaattagccaggcatggtggcgcatgcctgtaatcccagctactcgggaggctgagggaggagaattgcttgaacgtgggtggc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289135 226 - 123690457 AAATCTACCAAGGTTggccaggtgcggtggctcacgcctgtaatccctgcactttgggacgctgaggcgggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatagcaaaaccccgtctctactaaaataaaaattagccaggcatagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacatgggtggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103576238 226 + 192599291 AAATCTACCGAGGTTggccaggtgtaggggctcatgcctgtaatcccagtactttgggagactgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatagcaaaaccccatctctactaaaataaaaattagccgggcatgatggtgcatgcctgtaatcccagctactctggaggctgaggcatgagaattgcttgaacataggtggc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103212819 226 - 192460366 AAATCTACCGAGGTTggccaggtgtaggggctcacgcctgtaatcccagcactttgggagactgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatagcaaaaccccatctctactaaaataaaaattagccgggcgtgatggtgcatgcctgtaatcccagctactctggaggctgaggcatgagaattgcttgaacacaggtggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101014144 226 + 187378091 AAATCTACTGAGGTTGGCCAGgtatgggggctcacgcctgtaatcccagcactttgggagactgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacagagaaaaaacccatctctactaaaataaaaattagccaggcatgatggtgcatgcctgtaatcccagctactctggaggctgaggcaagagaattgcttgaacgcgggcggc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4881891 226 + 91754291 aaatctactgaggttgaccaggtgtgggagctcacacctgtaatcccagcactttgggagactgaggcaggtggatcatctgaggtcaggagttcgagaccagcctggccaacatagcaaaaccccatctctactaaaataaaaattagccaggcatgatggtgcatgcttgtaatcccagctactctggaggctgaggcaagagaattgcttgaacgcaggcggc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92358415 226 - 98464013 ATGTCCACCAAGGCTGTccaggcgtggtggctcacccctgtacccccagcactttgggaggctgaggcaggtggatcacttgcggtcaggagtttgagaccagcctggcctacagagcaaaaccccatctctactaaaataaaaattagctgggcatggtggtgcatgcctgtaatcccagctacatgcgaggccgaggcaggagaatcacttgaacccgggaggc i calJac3.chr15 C 0 C 0 e canFam3.chr34 24742820 0 - 42124431 C a score=12756.000000 s hg38.chr3_KI270781v1_alt 3273 14 + 113034 agaagttgcagtga s panTro4.chr3 13753038 14 - 202329955 agaagttgcagtga i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289361 14 - 123690457 agaagttgcagtga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103576464 14 + 192599291 agaagttgcagtga i rheMac3.chr2 C 0 I 1152 s calJac3.chr15 92358641 14 - 98464013 aaaagttgcagtga i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4882117 0 + 91754291 C e papAnu2.chr2 101014370 0 + 187378091 C e macFas5.chr2 103213045 0 - 192460366 C e canFam3.chr34 24742820 0 - 42124431 C a score=793.000000 s hg38.chr3_KI270781v1_alt 3287 3 + 113034 Att s panTro4.chr3 13753052 3 - 202329955 Att i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289375 3 - 123690457 gtt i nomLeu3.chr11 C 0 C 0 s calJac3.chr15 92358655 3 - 98464013 gct i calJac3.chr15 C 0 I 1076 e chlSab2.chr15 4882117 0 + 91754291 C e papAnu2.chr2 101014370 0 + 187378091 C e macFas5.chr2 103213045 0 - 192460366 C e rheMac3.chr2 103576478 1152 + 192599291 I e canFam3.chr34 24742820 0 - 42124431 C a score=26683.000000 s hg38.chr3_KI270781v1_alt 3290 102 + 113034 aatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataatt-aaaaaaaaaaaa s panTro4.chr3 13753055 103 - 202329955 aatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataattaaaaaaaaaaaaA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289378 103 - 123690457 aatgggtgcagcagaccaacatggcccatgtatacatatgtaataaacctgcacgttgtgcacatgtaccctagaacttaaagtataattaaaaaaaaaaaGA i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4882117 0 + 91754291 C e papAnu2.chr2 101014370 0 + 187378091 C e macFas5.chr2 103213045 0 - 192460366 C e rheMac3.chr2 103576478 1152 + 192599291 I e canFam3.chr34 24742820 0 - 42124431 C e calJac3.chr15 92358658 1076 - 98464013 I a score=89607.000000 s hg38.chr3_KI270781v1_alt 3392 75 + 113034 Agaagttgcagtgagccgggatcactccattgcactccagcctgggcgacagagtgagactctgtctc------------aaaaaaa s panTro4.chr3 13753158 75 - 202329955 Agaagttgcagtgagccgggatcactccattgcactccagcctgggcgacagagtgagactctgtctc------------aaaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289481 84 - 123690457 Agaagttgcagtgagccgggatcactccattgcactctagcctgggtgacagagtgagactctgtctc---aaaaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103213045 83 - 192460366 agaagttgcagtgagccgagatcattccattgcactccaggctgggcgacagagtgagactccatctc----aaaaaaaaaaaaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101014370 87 + 187378091 agaagttgcagtgagccgagatcattccatcgcactccaggctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4882117 80 + 91754291 agaagttgcagtgagcggagatcattccatcacactccaggctgggcaacagagtgagactccatct-------aaaaaaaaaaaaa i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103576478 1152 + 192599291 I e canFam3.chr34 24742820 0 - 42124431 C e calJac3.chr15 92358658 1076 - 98464013 I a score=1477642.000000 s hg38.chr3_KI270781v1_alt 3467 904 + 113034 aaGTCCACCAAGGTTGAGCcttgatctattagaggacgagcttcaggataaaatcaaaatcattccttttcttttttccataaaggcttgcattt--gagcctctggtcttgctaaatgggttaaggaaagttaa----gaaagtc-----tctcaagggtgcctctgtcccaggcagtacctgcccttctttccctgggcaatgagcttcatggctcagccttggggaggagaagctgaaagagtgtgatttacagggaaaataaaaatatgtggatttaatatttTTCCTCttgcatattttatctcagtttggcacttgtatttttactttgtttatgatgtctttcaaggacaag-ctttttaatatttatggtgtcaaatctgtcagcttttccctaatggcttctgggtttggtgccccgcattggaaatctttctccaccctaagACCGaacataacttttaatggctgcaaagcatgccattgtgcaaatatgcaaataagccctaatttatttacagatgaatatttagtgtgtttctactgtttaagtcataataaataatgcagcaaacatctctgtaa-atacattttatcttctgcaatgcac--agtttctttaaggatagattcttagggaatccatgggcctttttcaccattttaaaagcctttacaacaatgaaagaattacctcttacaaagctgcacaggtcaactaaaatgtca-----attttcttttgcatagaattgcacctgctcagtgtggttata-ttgcatttcaggttgactaaaagctctggtagttacaaatgactttgattaataaaaatatgaaa-----aattatgagttaaaaaatgccacttgtctgatagactaaaactttccgaagaccgagggggaacttaataaaaCTGt s panTro4.chr3 13753233 904 - 202329955 aaGTCCACCAAGGTTGAGCCTTGATCTATTAGAGGACGAGCTTCAGGATAAAATCAAAATCATTCCTTTTCTTTTTTCCATAAAGGCTTGCATTT--GAGCCTCTGGTCTTGCTAAATGGGTTAAGGAAAGTTAA----GAAAGTC-----TCTCAAGGGTGCCTCTGTCCCAGGCAGTACCTGCCCTTCTTTCCCTGGGCAATGAGCTTCATGGCTCAGCCTTGGGGAGGAGAAGCTGAAAGAGTGTGATTTACAGGGAAAATAAAAATATGTGGATTTAATATTTTTCCTCttgcatattttatctcagtttggcacttgtatttttactttgtttatgatgtctttcaaggacaag-ctttttaatatttatggcgtcaaatctgtcagcttttccctaatggcttctgggtttggtgccccgcattggaaatctttctccaccctaagACCGaacataacttttaatggctgcaaagcatgccattgtgcaaatatgcaaataagccctaatttatttacagatgaatatttagtgtgtttctactgtttaagtcataataaataatgcagcaaacatctctgtaa-atacattttatcttctgcaatgcac--agtttctttaaggatagattcttagggaatccatgggcctttttcaccattttaaaagcctttacaacaatgaaagaattacctcttacaaagctgcacaggtcaactaaaatgtca-----attttcttttgcatagaattgcacctgctcagtgtggttata-ttgcatttcaggttgactaaaagctctggtagttacaaatgactttgattaataaaaatatgaaa-----aattatgagttaaaaaatgccacttgtctgatagactaaaactttccgaagaccgagggggaacttaataaaaCTGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14289565 905 - 123690457 aaGTCCACCAAGGTTGAGCcttgatctattagaggacgagcttcaggataaaatcaaaatcattcc-cttctttttcccataaaggctttcattt--gagcctcttgtcttgctaaatgggttaaggaaagttaa----gaaagtc-----tctcaa-ggtgcctctgtcccaggcagtacctgcccttctttccctgggcaacgagcttcatggctcagccttggggaggagaagctgaaagagtgtgatttacaggaaacataaaaatatgtggatttaatattGTTCCTCttgcatattttatctcagtttggcacttgtatttttactttgtttatgatgtctttcaaggacaagcctttttaatatttatggtgtcaaatctgtcagcttttccctaatggcttctgggtctggtgccccgcataggaaatctttctccaccctaagACCGagcataacttttaatggctgcaaagcatgccattgtgcaaatatgcaaataagccctaatttatttacagatgaatatttagtgtgtttctactgtttaagtcataataaataatgcagtaaacatctttgtaa-atacattttatcttctgcaatgcacatagtttctttaaggatagattcttagggaatccatgggcctttttcaccattttaaaagcctttacaacaatgaaagaattacctcttacaaagctgcacaggtcaactaaaatgtca-----atttccttttgcatagaattgcacctgctcagtgtggttatatttgcatttcaggttgactaaaagctttggtagttacaaatgactttgattaacaaaaatatgaaa-----aattatgagttaaataatgtcacttgtctgatagactaaaacttttcaaagacaga-ggggaacttaataaaagTGt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103213128 907 - 192460366 aaGGCCC-CAAGGTTGAGCcttgatctattagaggacgagcttcagaataaagtcaaaatcattcc-ttttgtttttccacaaaggctttcattt--gagcctcttgtcttgctaaatgggttaaggaaagttaag---gaaagtc-----tctcaagggtgcctctgtcccaggcagtacctgcccttctttccctgggcaatgagcttcatggctcagccttggggaggagaagctgaaagagtgtgatttacagggaaaataaaaatacgtggatttaatattGTTCCTCTTGCatattttatctcagtttggcacttgtatttttactttgtttatgatgtctttcaaggacaagcctttttaatatttatggtatcaaatctgtcagcttttccttaatggcttctggggttggtgccccgcataggaaatctttctccaccctaagACTGaacataacttttaatggctgcaaagcacgccattgtgcaaatatgcaaataagccctaatttatttacagatgaatatttagtgtgtgtctactgtttaagtcataataaataatgcagcaaacatctttgtaa-atacattttatcttctgcaaagcacatagtttctttaaggatagattcttagggaatccatgggccttttccaccattttaaaagcctttacaacaatgaaagaattacctcttataaagctgcacaggtcaactaaaatgcca-----attttcttttgcatagaattgcacctgttcagtgtggttatatttgcatttcaggttgattaaaagctctggtagttacaaatgaccttgattaataaaaatatgaaa-----aatcatgagttaaaaaatgctgcttgcctgatagactaaaacttttcaaagacagagggAGACCTTAATAAAAGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101014457 907 + 187378091 aagtcca-caagGTTGAGCCTTGATCTATTAGAGGAGGAGCTTCAGGATAAAGTCAAAatcattcc-ttttgtttttccacAAAGGCTTTCATTT--GAGCCTCTTGTCTTGCTAAATGGGTTAAGGAAAGTTAAG---GAAAGTC-----TCTCAAGGGTGCCTCTGTCCCAGGCAGTACCTGCCCTTCTTTCCCTGGGCAATGAGCTTCATGGCTCAGCCTTGGGGAGGAGAAGCTGAAAGAGTGTGATttacagggaaaataaaaatatgtggatTTAATATTGTTCTTCTTGCATATTTTATCTCAGTTTGGCActtgtatttttgctttgtttatgaTGTCTTTCAAGGACAagcctttttaatatttatggtaTCAAATCTGTCAGCTTTTCCTTAATGGCTTCTGGGGTTGGTGCCCCGCATAGGAAATCTTTCTCCACCCTAAGACTGAACATAACTTTTAATGGCTGCAAAGCACGCCATTGTGCAAATATGCAAATAAGCCCTAATTTATTTACAGATGAATATTTAGTGTGTGTCTACTGTTTAAGTCATAATAAATAATGCAGCAAACATCtttgtaa-atacattttatcttCTGCAAAGCACATAGTTTCTTTAAGGATAGATTCTTAGGGAATCCATGGGCCTTTTCCACCATTTTAAAAGCCTTTACAACAATGAAAGAATTAGCTCTTATAAAGCTGCACAGGTCAACTAAAATGCCA-----ATTTTCTTTTGCATAGAATTGCACCTGTTCAGTGTGGTTATATTTGCATTTCAGGTTGATTAAAAGCTCTGGTAGTTACAAATGACtttgattaataaaaatatgaaa-----aattatgagTTAAAAAATGCTGCTTGCCTGATAGACTAAAACTTTTcaaagacagagggagaccttaataaaactgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4882197 907 + 91754291 aagtcca-caaggttgagccttgatctattagaggaggagcttcaggataaagtcaaaatcattcc-ttttgtttttccacaaaggctttcattt--gagcctcttgtcttgctaaatgggttaaggaaagttaag---gaaagtc-----tctcaagggtgcctctgtcccaggcagtacctgcccttctttccctgggcaatgagcttcatggctcagccttggggaggagaagctgaaagagtgtgatttacagggaaaataaaaatacatggatttaatattGTTCTTCTTGCatattttatctcagtttggcacttgtatttttactttgtttatgatgtctttcaaggacaagcctttttaatatttatggtatcaaatctgtcagcttttccttaatggcttctggggttggtgccccgcataggaaatctttctccaccctaagACTGaacataactgttaatggctgcaaagcatgccattgtgcaaatatgcaaataagccctaatttatttacagatgaatatttagtgtgtgtctactgtttaagtcataataaataatgcagcaaacatctttgtaa-atacattttatcttctgcaaagcacatagtttctttaaggatagattcttagggaatccatgggcctttttcaccattttaaaagcctttacaacaatgaaagaattacctcttataaagctgcacaggtcaactaaaatgtca-----attttcttttgcatagaattgcacctgttcagtgtggttatatttgcatttcaggttgattaaaagctctggtagttacaaatgactttgattaataaaaatatgaaa-----aattatgagttaaaaaatgctgcttgcctgatagactaaaacttttcaaagacagagggAGATCTTAATAAAAGTGt i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24742820 908 - 42124431 AAGGCCACCCAGGTGGGTCCTTGATTTATTAAAAGGCGGTACTCAGGAT------AAAACTATTTCTTTTCTTTCCTTCGCAAAGGCTGGCACATGGGAGACTCTGGTCTTTC-AAAGGGGGTGAAAAAAGTCAGGGTTGAGACTCACATTTTCTAGGGGCCTGTCTGTCCCAAGCAGTTCCTAGCCCTCTTTCTCTGGGCGATAAGCTTCATGGCTCAGCCCCAGAGGAGAGAAGCTGTAATAGTGTGATTTAC-GGGAAGATAAAGATACATGGCTTTCATATTGCTACTGCTGCatattttatctcagtttgtcacttgtattttcactttgtttatggtgtctttcaagggcaaacctttttaatatttatggtgtcagatctgtcagctttcccttaatggtttctgggtttggtgtcctgcagaggaaatttttctctgctctaagACTAAGCAGAacttctagtagttgcaaaatatgccattgtgcaaacatgcaaacgtgccctgatttatttacagatgaatatttagtgcatttctgctgtttaagctatcataaataatacaatgaacatctttggaatatacattttcccttctgcagtttaaaccatttcttt-gggatagattcttatggagtTCATGGGTCttt----ctattttaaaagccttaataacaattaaatatttacctcttataaagttacacaggccaactaaaatgccaaaattactttcttttgc-tagaactgcagcagcttagtgtgat-----ttatatttcatatttattagaagctatggtagttacaaatgtctttgatcaataaaaa-atgagaaaatcaactattagttgacaaatgcaatttgtttgatagactaaatcttttcaaaaata-aggGAGAACGT-ATAAAATTGT i canFam3.chr34 C 0 C 0 e rheMac3.chr2 103576478 1152 + 192599291 I e calJac3.chr15 92358658 1076 - 98464013 I a score=25317.000000 s hg38.chr3_KI270781v1_alt 4371 15 + 113034 tttctttctttct---tt- s panTro4.chr3 13754137 15 - 202329955 tttctttctttct---tt- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14290470 15 - 123690457 tttctttctttct---tt- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103214035 18 - 192460366 tttctttctttctttctt- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101015364 15 + 187378091 tttctttctttct---tt- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4883104 16 + 91754291 tttctttctttctt--tt- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92359734 15 - 98464013 tttctttctttct---tt- i calJac3.chr15 I 1076 C 0 s canFam3.chr34 24743728 15 - 42124431 -TTCTTAttttat---ttt i canFam3.chr34 C 0 I 92 e rheMac3.chr2 103576478 1152 + 192599291 I a score=123304.000000 s hg38.chr3_KI270781v1_alt 4386 96 + 113034 ctttc---ttttccagacagggtcttgctctgtcacccaggctggagtgtggtggtgtgatcactgcacactgctcactgcagtcttcacctcccaggc s panTro4.chr3 13754152 89 - 202329955 ctttc---tttTCCagacagggtcttgctctgtcacccaggctggagtgtggtggtgtgat-------cacagctcactgcagtcttcacctcccaggc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14290485 92 - 123690457 ctttctttttttccagacagggtcttgctctgtcacccaggctggagtgcggtggtgtgat-------catagctcactgcagtcttcacctcccaggc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103214053 92 - 192460366 tctttcttttttccagacagggtcttgctctgtcacccaggctggagtgcgctggtgtgat-------cacacctcactgcagtcttcacctcccagac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101015379 92 + 187378091 ttttttttttttccagacagggtcttgcactgtcacccaggctggagtgcgctgatgtgat-------cacacctcactgcagtcttcacctcccagac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4883120 92 + 91754291 ttaaatttttttccagaccgggtcttgcgctgtcacccaggctggagtgcgctgatgtgat-------cacacctcactgcagtcttcacctcccagac i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92359749 76 - 98464013 ccttt---ctttc--gacagtgtcttgctgtgtca-ccaggctgga----------ccaat-------cactgctcactgcagtctccacctccgaggc i calJac3.chr15 C 0 C 0 e rheMac3.chr2 103576478 1152 + 192599291 I e canFam3.chr34 24743743 92 - 42124431 I a score=199707.000000 s hg38.chr3_KI270781v1_alt 4482 89 + 113034 tcaagcgatcctcctgcctcagcctcctgaatagctgggactataggcacgtgccaccatgcccggctaa---ttttgtattttttg--------------tagag s panTro4.chr3 13754241 89 - 202329955 tcaagcgatcctcctgcctcagcctcctgaatagctgggactataggcacgtgccaccatgcccggctaa---ttttgtattttttg--------------tagag i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14290577 89 - 123690457 tcaagcgatcctcctgcctcagccttctgaatagctgggactacaggcacttgccaccatgcctggctaa---ttttgtattttttg--------------tagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103577630 90 + 192599291 tcaagccatcctcccgcctcagcctcctgaatagctgggactacaggcacgtgccaccatgcccggccaat--ttttgtatctgttg--------------tagag i rheMac3.chr2 I 1152 C 0 s macFas5.chr2 103214145 90 - 192460366 tcaagccatcctcccgcctcagcctcctgaatagctgggactacaggcacgtgccaccatgcccggccaat--ttttgtatctgttg--------------tagag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101015471 90 + 187378091 tcaagccatcctcctgcctcagcctcctgaatagctgggactacaggcacgtgccaccatgcccggccaat--ttttgtatctgttg--------------tagag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4883212 90 + 91754291 tcaagccatcctcccgcctcagcctcctgaatagctgggactacaggcacgtgccaccatgcccggccaat--ttttgtatctgttg--------------tagag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92359825 106 - 98464013 tcaagcaatcctcctgcctcagcctcctgaatagatgggactataggcatgtgccaccatggccagctaattgttttttgttttttgtttgtttttttttatagag i calJac3.chr15 C 0 C 0 e canFam3.chr34 24743743 92 - 42124431 I a score=249990.000000 s hg38.chr3_KI270781v1_alt 4571 113 + 113034 acagggttttgccattttttccaggatggtctcaagctcctgggctcaagcg---------atctacccacctcagcctcccaaagtgctgggattacaggcatgagccaccacacccggcc s panTro4.chr3 13754330 113 - 202329955 acagggttttgccattttttccaggatggtctcaagctcctgggctcaagcg---------atctacccacctcggcctcccaaagtgctgggattacaggcatgagccaccacacccggcc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14290666 113 - 123690457 acacggttttgccacttttcccaggctggtctcgagctcctgggctcaagcg---------atctacccacctcagcctcccaaagtgctgggattacaggcatgagccactacacctggcc i nomLeu3.chr11 C 0 I 1311 s rheMac3.chr2 103577720 113 + 192599291 acagggttttgccatttttcccaggctggtctcaagttcctgggctcaagca---------atctatccacctcaacctaccaaagtgctgggattacaggcatgagcctccacacctggcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103214235 113 - 192460366 acagggttttgccatttttcccaggctggtctcaagttcctgggctcaagca---------atctatccacctcaacctaccaaagtgctgggattacaggcatgagcctccacacccggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101015561 113 + 187378091 acagggttctgccatttttcccaggctggtctcaagttcctgggttcaagca---------atctatccacctcagcctaccaaagtgctgggattacaggcatgagcctcctcACCCGGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4883302 113 + 91754291 acagggttctgccatttttcccaggctggtctcaagttcctgggttcaagca---------atctatccacctcagcctaccaaagtgctgggattacaggcatgagcctccacacccggcc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92359931 113 - 98464013 atgaggttttgccatttgccccaggctggtctccagctcctgggatcaagca---------atctactcacctaggcctcccaaagagctgggattacaggtgtgagccaccacactaggcc i calJac3.chr15 C 0 C 0 s canFam3.chr34 24743835 81 - 42124431 gcagggctctaac-------ccag---gacctagagatcatgagctgagccaaagtcagacacttaaccaactgagcc---------------att-caggca----cctc----------- i canFam3.chr34 I 92 C 0 a score=961654.000000 s hg38.chr3_KI270781v1_alt 4684 385 + 113034 AAAAGTGTTTTGTATTGTATAGAGATGTCCAGAGAAG--AAAAAGACCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATTCACATTATCAGCCCTTCATTTAAACAAATACAGTcaacatcaccatcatcacatccccaccaccatcctcaccatcacccaccccatgc-------ac-cTGGCTTCACTCATAGAGAACCCATCTCTCCCCTCACTGGAGCTTGAGCTGTACAAGAGAGATTCCACCACCCCAAGCTCATACATGAGAAAACAGAGTTTCAGTGATGTG---------GAACTGGAAGAGTGGGCTTCTGAATTTGAAGCTAGTGTTTTATTGATAATAAGAAAGTTAAGTTTCTAAATTAAGAAATTAGGTG s panTro4.chr3 13754443 385 - 202329955 AAAAGTGTTTTGTATTGTATAGAGATGTCCAGAGAAG--AAAAAGACCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATTCACATTATCAGCCCTTCATTTAAACAAATACAGtcaacatcaccatcatcacatccccaccaccatcctcaccatcaccCACCCCATGC-------AC-CTGGCTTCACTCATAGAGAACCCATCTCTCCCCTCACTGGAGCTTGAGCTGTACAAGAGAGATTCCACCACCCCAAGCTCACACATGAGAAAACAGAGTTTCAGTGATGTG---------GAACTGGAAGAGTGGGCTTCTGAATTTGAAGCTAGTGTTTTATTGATAATAAGAAAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14292090 389 - 123690457 AAAAGTGTTTTGTATTGTATAGAGATGTCCACAGAAG--AAAGAGACCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATTCACATTATCAGCCCTTCATTTAAACAAATACAGtcatgatcaccatcatcacatccccaccaccatcctcaccatcaCCCA-CCCATGCGCC-TG-GC-CTGGCTTCACTCATAGAGAACCCATCTCTCCCCTCACTGGAGCTTGAGCTGTACAAGAGAGATTCCACCACCCCAAGCTCACACATGAGAAAACAGAGTTTCAGCGATGTG---------GAACTGGAAGAGTGGGCTTCTGAATTTGAAGCTAGTGTTTTATTGATAATAAGAAAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i nomLeu3.chr11 I 1311 C 0 s rheMac3.chr2 103577833 385 + 192599291 AAAAGTATTTTGTACTGTATAGAGATGTCCAGAGAAG--AAAAAGGCCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATCCACATTATCAGCCCTTCTTTGAAACAAAAATGGtcatcatcagcatcattacatccccatcaccatcctcaccatcaccCGCCCCATGC-------GC-CTGGCTTCACTCACAGAGAAGCCATCTCTCCCGTCACTGGAGCCTGAGCTGTACAAGAGAGACTCCACCACCCCAGGCTCACACATGAGAAAACAGAGTTTCAGCGATGTG---------GAAATGGAAGAGTGGGCTTCTGAATTTGAAGCTAGCCTTTTATTGAGAATAAGAAAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103214348 385 - 192460366 AAAAGTATTTTGTACTGTATAGAGATGTCCAGAGAAG--AAAAAGGCCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATCCACATTATCAGCCCTTCTTTGAAACAAAAATGGtcatcatcagcatcattacatccccatcaccatcctcaccatcacccgccccatGT-------GC-CTGGCTTCACTCTCAGAGAAGCCATCTCTCCCGTCACTGGAGCCTGAGCTGTACAAGAGAGATTCCACCACCCCAGGCTCACACATGAGAAAACAGAGTTTCAGCGATGTG---------GAAATGGAAGAGTGGGCTTCTGAATTTGAAGCTAGCCTTTTATTGAGAATAAGAAAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101015674 386 + 187378091 AAAAGTGTTTTGTACTGTATAGAGATgtccagagaaga-aaaaagaccaTTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATCCACATTATCAGCCCTTCTTTGAAACAAAAATGGTCATCATCAGCATCATTACATCCCCATCACCATCCTCACCATCACCCGCCCCATGT-------GC-CTGGCTTCACTCACAGAGAAGCCATCTCTCCCCTCACTGGAGCCTGAGCTGTACAAGAGAGATTCCACCACCCCAAGCTCACACATGAGAAAACAGAGTTTCAGCGATGTG---------GAACTGGAAAAGTGGGCTTCTGAATTTGAAGCTAGCCTTTTATTGAGAATAAGACAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i papAnu2.chr2 C 0 I 1506 s chlSab2.chr15 4883415 385 + 91754291 AAAAGTGTTTTGTACTGTATAGAGATGTCCAGAGAAG--AAAAAGACCATTTCAGGGATAACCAGTTAATTCCCAGGAATCAGGTTCTAGATTTCTTATCCACATTATCAGCCCTTCTTTGAAAGAAAAATGGtcatcatcagcatcattacatccccaccaccatcctcaccatcacctgccccatGC-------GC-CTGGCTTCACTCACAGAGAAGCCATCTCTCCCCTCACTGAAGCCTGAGCTGTACAAGAGAGATTCCACCACCCCAAGCTCACACATGAGAAAACAGAGTTTCAGCGATGTG---------GAACTGGAAGAGTGGGCTTCTGAATTTGAAGCTAGCCTTTTATTGAGAATAAGAAAGTTAAGTTTCTAAGTTAAGAAATTAGGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92360044 386 - 98464013 -AAAATGTTTT-TACTGTATAGAGATGTCCAGAGAAG--AAAAAGACCATTTCAGGGATAATCGGTTACTTCCCAGGAATCAGGTTCGAGATTTCTTATTCACATTATCAGCCCTTCTTTTAAACAAATATGGTAatcatcaccatcaccatatccccactgccatcctcaccatcaccCACTCTGTGTGCTGTGTAC-CTGGCTTCACTCTCAGAGAACCCATCTCTCCcctcactggagcctgagctatacaagagagattttatcaccccaagctcacatatgagaaaacagagtttcagagatgtG---------GAACTGGAAGAGTGGGCTTCTGAATTTGAAGCTAGTGTTTTTGTGAAATTAAGAAAGTTAA-TTTCTAAATTAAGAAATTAG--- i calJac3.chr15 C 0 C 0 s canFam3.chr34 24743916 345 - 42124431 ------GTTTCTTATTTTATAGAGAAGTCATGAGGAGACAAAAAGATCATCTCAAAGATACCTAGTTCATTTCCAGTGATCAACTTCTAGATTT------CATGTTATCAGGCCTTCTTTTGAACA------------------ATAAACTCATTGTGGCCACCTAACCCCCCATCACAAGGCCCTTGT-------GCTCTGG-----------------CCAGCTTCCCTGCAGGCCAGGCCTGAGCTGTGCTATAAAGGTGTCACTACCCCAAGCTCACACATGAGAACACAGAGTTCCAGACATGTGCTTGCACGTGAACGGGAGGGCCAGGTTTCTGCACCTGGGTCTGCCATCTTGTGAGATACAGGACATTTCA-----TTAGCTAAGATATTAGGCT i canFam3.chr34 C 0 C 0 a score=11683.000000 s hg38.chr3_KI270781v1_alt 5069 6 + 113034 CTAGAg s panTro4.chr3 13754828 6 - 202329955 CTAGAg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14292479 6 - 123690457 CTAGAg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103578218 6 + 192599291 CTAGAg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103214733 6 - 192460366 CTAGAg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4883800 6 + 91754291 CTAGAg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92360430 1 - 98464013 -----g i calJac3.chr15 C 0 C 0 s canFam3.chr34 24744261 6 - 42124431 CTAGAG i canFam3.chr34 C 0 I 740 e papAnu2.chr2 101016060 1506 + 187378091 I a score=156406.000000 s hg38.chr3_KI270781v1_alt 5075 96 + 113034 gctcggcgcagtggctcatgcatataatcccagcactttgggaggccgaggcaagcggatca----cctgaggtcaggagttcgagaccagcctggccaa s panTro4.chr3 13754834 96 - 202329955 gctcggcgcagtggcttatgcctataatcccagcactttgggaggccgaggcaagcggatca----cctgaggtcaggagttcgagaccagcctggccaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14292485 96 - 123690457 gctgggcgcagtggttcacgcctgtaatcccagcactttgggaggccgaggcaggcggatca----cctgaggtcaggagtttgagaccagcctggccaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103578224 96 + 192599291 gccgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaagcaggtggatca----cctgaggttaggagtttgagaccagcctggccaa i rheMac3.chr2 C 0 I 55 s macFas5.chr2 103214739 96 - 192460366 gccgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaagcaggtggatca----cctgaggttaggagtttgagaccagcctggccaa i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4883806 96 + 91754291 gccgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaagcaggtggatca----cctgaggttaggagtttgagaccagcctggccaa i chlSab2.chr15 C 0 I 55 s calJac3.chr15 92360431 99 - 98464013 gctgggtgtggtggttcatgcctgtaatcccagcactttaggaggccgaggtcggtggatcaggagacagagatcaagagacctagacca-tctggccag i calJac3.chr15 C 0 C 0 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I a score=7242.000000 s hg38.chr3_KI270781v1_alt 5171 16 + 113034 tgtggtgaagccctgt s panTro4.chr3 13754930 16 - 202329955 tgtggtgaagccctgt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14292581 16 - 123690457 catagcaaaaccccat i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103214835 16 - 192460366 catagcaaaaccccat i macFas5.chr2 C 0 I 39 s calJac3.chr15 92360530 16 - 98464013 catactgaaattctgt i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4883902 55 + 91754291 I e papAnu2.chr2 101016060 1506 + 187378091 I e rheMac3.chr2 103578320 55 + 192599291 I e canFam3.chr34 24744267 740 - 42124431 I a score=43039.000000 s hg38.chr3_KI270781v1_alt 5187 103 + 113034 ctctaccaaatatacaaaaat--------------tagctgggcgtggtggcgtgcgcctgtaatcccagctactccggaggctgaggcaggagaatcgcttgaacctgggaggcag s panTro4.chr3 13754946 103 - 202329955 ctctaccaaatatacaaaaat--------------tagctgggcgtggtggcgcgcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcag i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14292597 103 - 123690457 ctctactaaaaatacaaaaat--------------tacccgtgcgtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcag i nomLeu3.chr11 C 0 I 413 s calJac3.chr15 92360546 115 - 98464013 ctctactaaaaatacaaaaagaaacaaacaaacaaaagccacgtatagcagca--cgcctgtaatcccagctacttgggaggctgaggcaggagaattgctggaacccaggaggcag i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4883902 55 + 91754291 I e papAnu2.chr2 101016060 1506 + 187378091 I e macFas5.chr2 103214851 39 - 192460366 I e rheMac3.chr2 103578320 55 + 192599291 I e canFam3.chr34 24744267 740 - 42124431 I a score=1365.000000 s hg38.chr3_KI270781v1_alt 5290 1 + 113034 a s panTro4.chr3 13755049 1 - 202329955 a i panTro4.chr3 C 0 C 0 s rheMac3.chr2 103578375 1 + 192599291 A i rheMac3.chr2 I 55 C 0 s macFas5.chr2 103214890 1 - 192460366 A i macFas5.chr2 I 39 C 0 s chlSab2.chr15 4883957 1 + 91754291 A i chlSab2.chr15 I 55 C 0 s calJac3.chr15 92360661 1 - 98464013 a i calJac3.chr15 C 0 C 0 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I e nomLeu3.chr11 14292700 413 - 123690457 I a score=4200.000000 s hg38.chr3_KI270781v1_alt 5291 2 + 113034 gg s panTro4.chr3 13755050 2 - 202329955 gg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14293113 2 - 123690457 GG i nomLeu3.chr11 I 413 C 0 s rheMac3.chr2 103578376 2 + 192599291 GG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103214891 2 - 192460366 GG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4883958 2 + 91754291 GG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92360662 2 - 98464013 gg i calJac3.chr15 C 0 I 1412 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I a score=761050.000000 s hg38.chr3_KI270781v1_alt 5293 593 + 113034 AGTATAGGGCACAGGAGGAGCAATTAATTCCAATTGAGGGAAATCTGGAAACGTCTGCCTGATTTCTCTCAttggggatcagaaaacaaaatgagcctaaatgaaggcctcagatgcaaaagtttttctctgatcttctcctgtcctcctgtctctggcccctcattctcccctgcagctagccctagaaactagaatctttcttccccaagacagatcatagaaaccagagatgtggccgggcccagtggttcacgcctgtaatcccagcac-tttgagaggccgaggcatgtggatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaagatatgaaaaatgagccaggcatggtgttgggtgcctataatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcaatgagctgagatggc-aacactgcactccaggctgggcaacggagagagactccgtctcaaaagataaaacaaaaagaaatgatctaacctac-tgtttttttcttgtttgtttgttttgttttgttgagacat s panTro4.chr3 13755052 594 - 202329955 AGTATAGGGCCCAGGAGGAGCAATTAATTCCAATTGAGGGAAATCTGGAAACGTCTGCCTGATTTCTCTCAttggggatcagaaaacaaaatgagcctaaatgaaggcctcagatgcaaaagtttttctctgatcttctcctgtcctcctgtctctggcccctcattctcccctgcagctagccctagaaactagaatccttcttccccaagacagatcatagaaaccagagacgtggccgggtgcggtggttcacgcctgtaatcccagcacttttgagaggccgaggcatgtggatcacctgagttcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaagatataaaaaatgagccaggcatggtgttgggtgcctataatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcaatgagctgagatggc-aacactgcactccaggctgggcaacggagagagactccgtctcaaaagataaaacaaaaagaaatgatctaacctAC-TGTttttttcttgtttgtttgttttgttttgttgagacat i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14293115 590 - 123690457 AGTATAGGGCACAGGAGGAACAATTTATTACAATCGAGGGAAATATGGAAACATCTG-CTGATTTCTCTCAttggggctcagaaaacaatataagcctaaatgaaggcctcagatgcaaaagtttttctctgaccttctcctgtcctcctgtctctggcccctcattctcccctgcagctagccctagaaactagaatccttcttccccaagacagatcatagaaaccagagatgtggccaggcgtggtggttcacgcctgtaatcccagcac-tttgagaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaatgagccaggcat-gtgttgggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttaaacccaggaggcagaggttgcaatgagctaagatggcaaacattgcactccaggctgggcaacagagcgagactctgtctc-aaagataaaacaaaaagaaatgatctaacctAC-TG-TTTTTTCCTGTTTGTTTGTTTTGTTTTGTTGAAACAT i nomLeu3.chr11 C 0 I 574 s rheMac3.chr2 103578378 593 + 192599291 AGTATAGGGCACAGGAGGAGCAATTAATTCCAACTGAGGGAAATCTGGAAACGTCTGCCTGATTTCTCTCACtggggctcagaaaacaatatgagcctaaatgaaggcctcagatgcaaaagtttttccctgaccttctcccatcctcctgtctctggcccctcattctcccttgcagctagccctagaaactagaatccttcttccccaagacagatcatagaaatcagagatatggccaggtgcggtggctcacgcctgtcatcccagcac-tttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctggctaacatggtgaaaccccatctgtactaaagaaacaaaaaatgagccaggcgtggtgttgggtgcctgtaatcccagctactcgggaggctgaggcaggaggattgcttgaacctgggaggcggaggttgcaatgagacgagatggc-aacactgcactccaggctgggcaacggagcgagactccacctcaaaagataaaacaaaaagaaattatctaacctac-tttttttttcttgtttgtttgttttgttttgttgagacat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103214893 593 - 192460366 AGTATAGGGCACAGGAGGAGCAATTAATTCCAACTGAGGGAAATCTGGAAACGTCTGCCTGATTTCTCTCACtgaggctcagaaaacaatatgagcctaaatgaaggcctcagatgcaaaagtttttccctgaccttctcccatcctcctgtctctggcccctcattctcccttgcagctagccctagaaactagaatccttcttccccaagacagatcatagaaatcagagatatggccaggtgcggtggctcacgcctgtcatcccagcac-tttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggctaacatggtgaaaccccatctgtactaaagaaacaaaaaatgagccaggcgtggtgttgggtgcctgtaatcccagctactcgggaggctgaggcaggaggattgcttgaacctgggaggcggaggttgcaatgagccgagatggc-aacactgcactccaggctgggcaacggagcgagactccacctcaaaagataaaacaaaaagaaatgatctaacctAC-TTTttttttcttgtttgtttgttttgttttgttgagacat i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4883960 594 + 91754291 AGTATAGGGCACAGGAGGAGCAATCAATTCCAATTGAGGGAAATCTGGAAACGTCTGCCTGATTTCTCTCACtggggctcagaaaacaatatgagcctaaatgaaggcctcagatgcaaaagtttttctctgaccttctcccatcctcctgtctctggcccctcattctcccctgcagctagccctagaaactagaatccttcttccccaagacagatcatagaaatcagagatatggccaggtgtggtggctcacgcctgtcatcccagcac-tttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctgtactaaagaaacaaaaaatgagccaggagtggtgttgggtgcctgtaatcccagctactcgggaggctgaggcaggaggattacttgaacctgggaggcggaggttgcaataagccaagatggc-aacactgcactccaggctgggcaacagagcaagactccatctcaaaacataaaacaaaaagaaattatctaacttacttttttttttcttgtttgtttgttttgttttgttgagacat i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I a score=56452.000000 s hg38.chr3_KI270781v1_alt 5886 69 + 113034 gagtttcgctcttgttgcccaggctggagtgcaatggcgcaatctcggctcactgtaatct---ctgcctcc s panTro4.chr3 13755646 69 - 202329955 gagtttcgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaatct---ctgcctcc i panTro4.chr3 C 0 M 786 s rheMac3.chr2 103578971 69 + 192599291 gagtttggctcttgttgcccgggctggcgtgcaatggcgcgatcttagctcactgcaacct---ccgcctcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103215486 69 - 192460366 gagttttgctcttgttgcccgggctggagtgcaatggcgcgatcttagctcactgcaacct---ccgcctcc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4884554 72 + 91754291 gagttttgctcttgttgcccgggctggagtgcaatggcatgatcttagctcactgcaacctccgccgcctcc i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I e nomLeu3.chr11 14293705 574 - 123690457 I a score=115667.000000 s hg38.chr3_KI270781v1_alt 5955 219 + 113034 tgagttcaagtaattatcttgcctcagcctcctgagtagctgaaattacaggcatgtgccaccacacccggctaatgttgta-ttttagtagagacagggtttcactatattggtcagaatggtcttgaactcctgacctcaagtgatccaccctcctcagccttccaaagtgctggtgtgggattacaggtgtgagccaccgtgcctggactactttgt s rheMac3.chr2 103579040 220 + 192599291 tgggttcaagtaattatcttgcctcagcctcctgagcagctgggattacaggcatgtgccaccacacctggctaattttgtatttttagtagagacagagtttcactatattggtcagactggtcttgaactcccaacctcaagtgatccaccctcctcagccttccaaagtgctggggtgggatcacaggtgtgagccaccatgcccagcctactttgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103215555 220 - 192460366 tgggttcaagtaattatcttgcctcagcctcctgagcagctgggattacaggcatgtgccaccacacctggctaattttgtatttttagtagagacagagtttcactatattggtcagactggtcttgaactcccgacctcaagtgatccaccctcctcagccttccaaagtgctggggtgggattacaggtgtgagccaccatgcccagcctactttgt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4884626 220 + 91754291 tgggttcaagtaattatcttgccccagcctcctgagtagctgggattacaggcatgtgccactacacctggctaattttgtatttttagtagagacagggtttcactatattggtcagactggtcttgaactcccgacctcaagtgatccaccctcctcagccttccaaagtgcaggggtgggattacaggtgtgagccaccatgcccagcctactttgt i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I e nomLeu3.chr11 14293705 574 - 123690457 I e panTro4.chr3 13755715 786 - 202329955 M a score=48191.000000 s hg38.chr3_KI270781v1_alt 6174 57 + 113034 ttgattgtagttcataggaccccattccaaagaggggccctgccccatccccagaag s panTro4.chr3 13756501 57 - 202329955 ttgattgtagttcataggaccccattccaaagaggggccctgccccttccccagaag i panTro4.chr3 M 786 C 0 s rheMac3.chr2 103579260 57 + 192599291 ttgattgtagttcataggaccccattccaaagaggtgttgtgccccatccctagaag i rheMac3.chr2 C 0 I 548 s macFas5.chr2 103215775 57 - 192460366 ttgattgtagttcataggaccccattccaaagaggtgttgtgccccatccccagaag i macFas5.chr2 C 0 I 228 s chlSab2.chr15 4884846 57 + 91754291 ttgattgtagttcctaggaccccattccaaagaggtgtcgtgccccatccccagaag i chlSab2.chr15 C 0 I 228 e papAnu2.chr2 101016060 1506 + 187378091 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I e nomLeu3.chr11 14293705 574 - 123690457 I a score=191.000000 s hg38.chr3_KI270781v1_alt 6231 2 + 113034 ga s panTro4.chr3 13756558 2 - 202329955 ga i panTro4.chr3 C 0 C 0 e chlSab2.chr15 4884903 228 + 91754291 I e papAnu2.chr2 101016060 1506 + 187378091 I e macFas5.chr2 103215832 228 - 192460366 I e rheMac3.chr2 103579317 548 + 192599291 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I e nomLeu3.chr11 14293705 574 - 123690457 I a score=2730.000000 s hg38.chr3_KI270781v1_alt 6233 2 + 113034 aa s panTro4.chr3 13756560 2 - 202329955 aa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14294279 2 - 123690457 aa i nomLeu3.chr11 I 574 C 0 s macFas5.chr2 103216060 2 - 192460366 aa i macFas5.chr2 I 228 C 0 s papAnu2.chr2 101017566 2 + 187378091 aa i papAnu2.chr2 I 1506 C 0 s chlSab2.chr15 4885131 2 + 91754291 aa i chlSab2.chr15 I 228 C 0 e rheMac3.chr2 103579317 548 + 192599291 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I a score=338359.000000 s hg38.chr3_KI270781v1_alt 6235 228 + 113034 ggtcaggagtttgagaccagcctgaccaatatggtgaaaccccgtctctactaaaaaatacagaaataaattagctgggcgtggtggcgcgcacctgtagtcccagctactaaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgcgccgagatcgcaccactgcactccagcct-g--------gcgacag--agagactccgtct---------------------------------caaaaacaaa----------------------aac-- s panTro4.chr3 13756562 228 - 202329955 ggtcaggagtttgagaccagcctgaccaatatggtgaaaccccgtctctactaaaaaatacagaaataaattagctgggcgtggtggcgcgcacctgtagtcccagctactaaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcgcaccactgcactccagcct-g--------gcgacag--agagactccgtct---------------------------------caaaaacaaa----------------------aac-- i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92513294 235 + 135191526 ggtcaagagattgagaccatcctggccaatacggtgaaaccctgtctctactaaaa---acataa--aaattagctgggcgtggtggcgcgcacctgtagtcccagctactaaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccaagatcgcaccactgcactccagcct-g--------gcgacag--agagactccgtctcaa--------------------aaacaaa-aacaaaaacaaa----------------------aac-- i ponAbe2.chr9 N 0 C 0 s nomLeu3.chr11 14294281 286 - 123690457 ggtcaggagtttgagaccagcctgaccaatatggtgaaaccccgtctctactaaaaaatacaaaaataaattagctgggtgtggtggtgcacacctgtagtctcagctactcaggaggctgaggcaggagaatagcttgaacctgggaggcagaggttgcagtgagccaagatcgcaccactgcactccagcctgg--------gtgacagacagagactctgtctcaaaataacaaaaaacaaaaaacaaacaaacaataaaaacaaaaaacaaacaacaacaacaaaacaaa-- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103216062 242 - 192460366 ggtcaggagtttgagaccagcctgaccaatatggtgaaaccctatctctactaaaaaatacaaaaataaatcagctgggctttgtggtgggcacctgtagtccctgctactcaggaggctgaggcaggagaatcgcttgtacctgggatgcagaggttgcagtgagccaagatggcgccactgtactccagcctgggtgacagagtgacagagagagactccgtct---------------------------------caaaacaaaa---------------------caaaac i macFas5.chr2 C 0 I 93 s papAnu2.chr2 101017568 228 + 187378091 ggtcaggagtttgagaccagcctgatcaatatggtgaaaccccatctctactaaaaaatacaaaaataaatcagctgggctttgtggcgggcacctgtagtccctgctacacaggaggctgaggcaggagaaccgcttgtacctgggatgcagaggttgcagtgagccaagatggcgccactgtactccagcctgg--------gtgacagaaagagactctgtct---------------------------------ccaaa---------------------------aaaac i papAnu2.chr2 C 0 I 79 s chlSab2.chr15 4885133 235 + 91754291 ggtcaggagtttgagaccaacctgaccaatatggtgaaaccccgtctctactaaaaaatacaaaaataaatcagcttgggttcgtggcgggcacctgtagtccctgctactcaggaggctgaggcaggagaatggcttgtacctgggatgcagaggttgcagtgagccaagatcgtgccactgcactccagcctgg--------gtgacagagagagactccatct---------------------------------caaaaaaaaa--------------------ccaagac i chlSab2.chr15 C 0 I 51 e rheMac3.chr2 103579317 548 + 192599291 I e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I a score=212607.000000 s hg38.chr3_KI270781v1_alt 6463 96 + 113034 aaaaaacagcttctcttgtatctttgggttgtcattctaaaggctcccatgtcacataaactgtgatcaaataaatttgtatgcatttttt---cccgt s panTro4.chr3 13756790 99 - 202329955 aaaaaacagcttctcttgtatctttgggttgtcattctaaaggctcccatgtcacataaactgtgatcaaataaatttgtatgcctttttttttcccgt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92513529 96 + 135191526 aaaaaacagcttcccttgtatctttgggttgtcattctgaaggctcccatgtcacataaactatgatcaaataaatttatatgcttttttt---cccat i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14294567 96 - 123690457 aaaaaacggctttccttgtatctttgggttgtcattctgaaggctcctgtgtcacataaactatgatcaaataaatttgtatgcctttttc---cccgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103579865 97 + 192599291 aaaaaccaacttcccttgtatcttt-ggttgtcattctgaaggctcccatgtcatataaactatgatcaaataaatttgtatgcctttttt-ttcccgt i rheMac3.chr2 I 548 C 0 s macFas5.chr2 103216397 97 - 192460366 aaaaaccaacttcccttgtatcttt-ggttgtcattctgaaggctcccatgtcatataaactatgatcaaataaatttgtatgcctttttt-ttcccgt i macFas5.chr2 I 93 C 0 s papAnu2.chr2 101017875 97 + 187378091 aaaaaccaactTCCCTTGTATCTTT-GGTtgtcattctgaaggctcccatgtcatataaactatgatcaaataaatttgtatgcctttttt-ttcccgt i papAnu2.chr2 I 79 C 0 s chlSab2.chr15 4885419 96 + 91754291 gaaaaccagcttcccttgtatcttt-ggttgtcattctgaaggctcccatgtcacataaactatgatcaaataaatttgtatgcc-ttttt-ttcccgt i chlSab2.chr15 I 51 C 0 e canFam3.chr34 24744267 740 - 42124431 I e calJac3.chr15 92360664 1412 - 98464013 I a score=192877.000000 s hg38.chr3_KI270781v1_alt 6559 65 + 113034 taatctgccttttgtcagtgatttttagtaaaccttcaaaggaggctttcccttgactcctacaC s panTro4.chr3 13756889 65 - 202329955 taatctgccttttgtcagtgacttttagtaaaccttcaaaggaggctttccctcgactcctacaC i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92513625 65 + 135191526 taatctgccttttgtcagtgatttttagcaaaccttcagaggaggctttcccttgactcctacaC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14294663 65 - 123690457 tcatctgccttttgtcagtgatttttagcaaaccttcagaggaggctttcccttgactcctgcaC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103579962 65 + 192599291 taatctgtcttttgtcagtgatttttagcaaactttcagagggggctttccctggactcttacaC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103216494 65 - 192460366 taatctgtcttttgtcagtgatttttagcaaactttcagagggggctttccctggactcctacaC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101017972 65 + 187378091 taatctgtcttttgtcagtgATTTTTAGCAAACTTTCAGAGGGGGCTTTCCCTGGACTCCTACAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4885515 65 + 91754291 taatctgtcttttgtcagtgatttttagcaaactttcagagggggctttccctggactcctataC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92362076 65 - 98464013 taatctgctttttgtcagtgacttttagcaaaccttcagagggggctttcccccagctctgacaC i calJac3.chr15 I 1412 C 0 e canFam3.chr34 24744267 740 - 42124431 I a score=1236242.000000 s hg38.chr3_KI270781v1_alt 6624 416 + 113034 TCTCCTTGAAATAAGTAACTTCTACGGTTTTGCGAGAAtcttttttcttacaataggaatgtatgtttactgaagaaaattcaggaaat-agagataagcaaaaagtagaaaatttagatcgactagaatcccatctcttagggaaaaacatagttggtgttttcttg-ttttttgca-tcttatttcctgcatatgtatatgtg------tttgtgtgtttgtgtaagaaaCACATTTTTCAAAGAACCAAAATGGGCTCATCCCACACCTACTGGT-TTTCCCTTTACCGTACAATCTAAAGCTAGCTCTAcatcaat-------------------------------------------------agcagg---------------------------------------------------------------------------agccagggg----------------------------------------------------------------------------gcttgtgagaagagcagaatgtcaggc---------------ccgaaccggaatctgcattttcg-taagccccctagaggattcctgtgcCCCACACACTCTGGGG s panTro4.chr3 13756954 416 - 202329955 TCTCCTTGAAATAAGTAACTTCTACGGTTTTGCGAGAAtcttttttcttacaataggaatgtatgtttactgaagaaaattcaggaaat-agagataagcaaagagtagaaaatttagatcgactagaatcccatctcttagggaaaaacatagttggtgttttcttg-ttttttgca-tcttatttcctgcatatgtatatgtg------tttgtgtgtttgtgtaagaaaTACATTTTTCAAAGAACCAAAATGGGCTCATCCCACACCTACTGGT-TTTCCCTTTACCGTACAATCTAAAGCTAGCTCTAcatcaat-------------------------------------------------agcagg---------------------------------------------------------------------------agccagggg----------------------------------------------------------------------------gctcgtgagaagagcagaatgtcaggc---------------ccgaaccggaatctgcattttcg-taagccccctagaggattcctgtgcCCCACACACTCTGGGG i panTro4.chr3 C 0 I 22 s ponAbe2.chr9 92513690 413 + 135191526 TCTCCTTGAAA-AAGTAACTTCCATGGTTTTGCGAGAAtcttttttcttacaacaggaatatatgtttattgaagaaaattcaggaaataagagataagcaaaaagtagaaaatttagatcgactagaat-ccatctcttagggaaaaacatagttggtgttttcttg-ttttttgca-tctgattttctgcatatgtata--tg------tttgtgtgtttgtgtaAGAAACACATTTTTCAAAGAACCAAAATGGGCTCATCCCACACCTACTGTT-TTCCCCTTTACCGTACAATCTAAAGCTAGCTCTACATCGAT-------------------------------------------------AGCAGG---------------------------------------------------------------------------AGccagggg----------------------------------------------------------------------------gcttgtgagaagagcagaatctcaggc---------------ccgaaccagaatctgcattttcg-taagccccctagaggattcCAGTGCCCCACACACTTTGGGG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14294728 415 - 123690457 TCTCCTTGAAATAAGTAACTTATATGGTTTTGTGAGAAtcttttttcttacaataggaa-atatgtttattgaagaaaattcagaaaat-agagataagcaaaaagtagaaaattaagatcgactagaatcccatctcttagggaaaaacatagtgggtgttttcttg-ttttttgca-tcttattttctgcatatgtatatttg------tttgtgtgtttgtGTAAGACACACATTTTTCAAAGAACCAAAATGGGCTCATCCCACACCTACTGTT-TTTCCCTTTACCATACAATCTAAACCTAGCTCTAcatcaat-------------------------------------------------agcagg---------------------------------------------------------------------------cgccagggg----------------------------------------------------------------------------gcttgtgagaagagcagaatctcaggc---------------ctgaaccagaatctgcattttcg-ttagccccctagaggattcctgtgccccacacactttgggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580027 410 + 192599291 TCTCCTTGAAATAAGTAACTTCTATGGTTTTGTGAGAAtcttttttcttacagtaggaatatatgtttattgaagaaaattcagaaaat-agagataagcaaaaagtagaaaattaagattgactagaatcccatctcttagggaaaaacatagttggtgttttcttgtttttttgca-tcttattttctgtatatgtgta------------tgcatgtctgtgtaaaacacacatttttcaaagaacc-aaatgggctcatcccacacctactgtt-ttTCCCTTTACCATATAATCTAAAGCTAGCTCTACATCAAT-------------------------------------------------AGAAGG---------------------------------------------------------------------------cgccagggg----------------------------------------------------------------------------gcttgtgagaagagcagaatctcaggc---------------ccgaatcagaatctgcattttag-taaggcccctagaggattcctatgccccacacactttgcgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103216559 410 - 192460366 TCTCCTTGAAATAAGTAACTTCTATGGTTTTGTGAGAAtcttttttcttacagtaggaatatatgtttattgaagaaaattcagaaaat-agagataagcaaaaagtagaaaattaagattgactagaatcccatctcttagggaaaaacatagttggtgttttcttgtttttttgca-tcttattttctgtatatgtgta------------tgcatgtctgtgtaaaacacacatttttcaaagaacc-aaatgggctcatcccacacctactgtt-ttTCCCTTTACCATATAATCTAAAGCTAGCTCTACATCAAT-------------------------------------------------AGAAGG---------------------------------------------------------------------------cgccagggg----------------------------------------------------------------------------gcttgtgagaagagcagaatctcaggc---------------ccgaatcagaatctgcattttag-taaggcccctagaggattcctatgccccacacactttgcgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101018037 409 + 187378091 TCTCCTTGAAATAAGTAACTTCTATGGTTTTGTGAGAATCTTTTTTCTTACAGTAGGAATATACGTTTAttgaagaaaattcagaaaat-agagataagcaaaaagtagaaaattaagaTTGACTAGAATCCCATCTCTTAGGGAAAAACATAGTtggtgttttcttgtttttttgca-tcttattttctgtatatgtgta------------tgtgtgtctgtgtaaaacacacatttttcaaagaacc--aatggGCTCATCCCACACCTACTGTT-TTTCCCTTTACCGTATAATCTAAAGCTAGCTCTACATCAAT-------------------------------------------------AGAAGG---------------------------------------------------------------------------CGCCAGGGG----------------------------------------------------------------------------GCTTGTGAGAAGAGCAGAATCTCAGGC---------------ccgaatcagaatctgcattttag-taAGGCCCCTAGAGGATTCCTATGCCCCACACACTTTGCGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4885580 409 + 91754291 TCTCCTTGAAATAAATAACTTCTATGGTTTTGTGAGAAtcttttttcttacagtaggaatatatgtttatggaagaaaactcagaaaat-agagataagcaaaaagtagaaaattaaggttgactagaatcccatctcttagggaaaaacatagttgctgttttcttg-ctttttgca-tcttattttctgcatatgtgta------------tgcgtgtttgtgtaaaacacacatttttcaaagaacc-aaatgggctcatcccacacctactgtt-ttTCCCTTTACCATACAATCTAAAGCTAGCTCTACATCAAT-------------------------------------------------AGAAGG---------------------------------------------------------------------------cgccagggg----------------------------------------------------------------------------gattgtgagaagagcagaatctcaggc---------------ccgaatcagaatctgcattttag-taaggcccctagaggattcctatgccccacacactttgcgg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92362141 397 - 98464013 TTTCCTTGAAATAAGTAGATTCTATGGTTTTGTGAGAATCTTTTTTCTTACAATAGGAA--------Tattgaagaaaattcagaaaat-agag--aagcaaaaagtagaaaattaggatcaactagaatcccatctcttaggg-gaaacatagttgatttttctttgttttttggcatttttattttctgcatatgtgta--------------tgtgtttgtgtaAAACACACATTTTTCAAAGAACTGAAATGGGCTCATCCCACACCTACTG-T-TGTCCCTTTACCATATAATCTAAACATAGCTCCAcatcaat-------------------------------------------------ggcagt---------------------------------------------------------------------------caccagccg----------------------------------------------------------------------------gcttgtgagaagagcagaatctcagac---------------cccaatcagaatctgca-tttca-taagccccctagaggattcctgtgtcccacacactttgggg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24745007 623 - 42124431 TCTTTTTAAAATAAATAACTTCCGTGGTCTTGAGAGACTCTTTTTGCTTACAACAGGAGCATGCATTTATGGAAGAAATTTTAGAAAAT-AGACATAAGCAAAAAGTAAGAAGTTAATATCGTTTGGAATCCCATCTCCCAGAAAAAGATACAGGTGGTAT--------GTTTTTGCA-CCTT-----TCGTGTATGTGTAGCTGTACACATTTGTGTGTTTGTGTAAGACAAACACTTTAAAAAGAA---AACAGGGTTCATCCCACATAGACTGTTCTCTCATTTTATCATATAACCTAGATATTTCTTCACATTGATACATAATTCCTTTTTTCTCtttttaaaaattatttaatttattttttaaaGTAGGTTGTGATGTAcacccaatgtggggcttgaactcaccaccctgagatcaagggtcccatgctctaccgactgagccaaccaggGGCCCCTAAACTGTAATCCCTTACACTCTTGCGGCTCGTCCtgtggtcctgaagcagcagcacaagaattacctggcagcttctgagtcatatagaatctcaggtgccatgtcagatctgctgacttagaatctgcattttaactcactctcccagaggacttacaag-caggcacagtttgaga i canFam3.chr34 I 740 C 0 a score=10476.000000 s hg38.chr3_KI270781v1_alt 7040 3 + 113034 AGC s ponAbe2.chr9 92514103 3 + 135191526 AGC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14295143 3 - 123690457 agc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580437 3 + 192599291 agc i rheMac3.chr2 C 0 I 10 s macFas5.chr2 103216969 3 - 192460366 agc i macFas5.chr2 C 0 I 10 s papAnu2.chr2 101018446 3 + 187378091 AGC i papAnu2.chr2 C 0 I 10 s chlSab2.chr15 4885989 3 + 91754291 agc i chlSab2.chr15 C 0 I 10 s calJac3.chr15 92362538 3 - 98464013 agc i calJac3.chr15 C 0 I 10 s canFam3.chr34 24745630 3 - 42124431 agc i canFam3.chr34 C 0 C 0 e panTro4.chr3 13757370 22 - 202329955 I a score=495848.000000 s hg38.chr3_KI270781v1_alt 7043 181 + 113034 ----------ATCGCCATTTTTAATGGCCACAGAGTCTCCCA-AACAGGGCTAGACCGTGATTCACTCATTGCATCTCTCGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTGGTCCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------CCTC-------------AGTCCGTGCCCAGGAGACTCCAACA-GCTGGGCAGGCGGC s panTro4.chr3 13757392 181 - 202329955 ----------ATGGACATTTTTAATGGCCACAGAGTCTCCCA-AGCAGGGCTAGACCGTGATTCACTCATTGCATCTCTCGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTGGTCCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------CCTC-------------AGTCCGTGCCCAGGAGACTCCAACA-GCTGGGCAGGCGGC i panTro4.chr3 I 22 C 0 s ponAbe2.chr9 92514106 182 + 135191526 ----------ATCGCCATTTTTAATGGCCACAGAGTCTCCCATAACAGGGCTAGACCATGATTCACTAGTTGCATCTCTCGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTAGTCCCTCTGGGATCTCTGGGCCCTTCAGACGCTCCC-------------------------------------------------------CCTC-------------AGTGCGTGCCCAGGAGACTCCAACA-GCTGGGCAGGCGGC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14295146 181 - 123690457 ----------aTCGCCATTTTTAATGGCCACAGAGTCTCCCATAACAGGGCTAGACCATGATTCACTCATTGCATCTCTCGGTGGTGAGGA-TTTTCGCTGTAACAAGAAGCTGGTCCCTCTGGGATATCTGGGCTCTTCAGACCTTCCC-------------------------------------------------------CCTC-------------AGTCCGTGCCCAGGAGACTCCAACA-GCTGGGCAGGCGG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580450 178 + 192599291 ----------AACATCGTTTTTAATGGCCACAGAGTTTCCCATAATAGGGCTACACCATGACTCACTCATTGCATCTCTCGGTGGTAAGGA-TTTTCCCTGTAACAAGAAGCTGGTGCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------GCTC-----------------CGTGCCCAGGAGACTCCAACA-GTTGGGCAGGCGGC i rheMac3.chr2 I 10 C 0 s macFas5.chr2 103216982 178 - 192460366 ----------AACATCGTTTTTAATGGCCACAGAGTTTCCCATAATAGGGCTACACCATGATTCACTCATTGCATCTCTCGGTGGTAAGGA-TTTTCCCTGTAACAAGAAGCTGGTGCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------GCTC-----------------CGTGCCCAGGAGACTCCAACA-GTTGGGCAGGCGGC i macFas5.chr2 I 10 C 0 s papAnu2.chr2 101018459 178 + 187378091 ----------AGCATCGTTTTTAATGTCCACAGAATTTCCCATAATAGGGCTACACCATGATTCACTCATTGCATCTCTCGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTGGTGCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------GCTC-----------------CGTGCCCAGGAGAGTCCAACA-GATGGGCAGGCGGC i papAnu2.chr2 I 10 C 0 s chlSab2.chr15 4886002 178 + 91754291 ----------AGCATCGTTTTAAATGGCCACAGAGTTTCCCATAATAGGGCTACACCATGATTCACTCATTGCATCTCTCGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTGGTCCCTCTGGGATCTCTGGGCTCTTCAGACCCTCCC-------------------------------------------------------GCTC-----------------CGTGCCCAGGAGACTCCAACA-GTTGGGCAGGCGGC i chlSab2.chr15 I 10 C 0 s calJac3.chr15 92362551 144 - 98464013 ----------AGCATCGTTTTTAACAGCCACAGAG---------------------------TCACTCATTGCATCTCCGGGTGGTGAGGA-TTTTCCCTGTAACAAGAAGCTGGTCCT---------TCTGGGCTCTTCAG-CCCGCCT-------------------------------------------------------CCTC-------------AATCAGCGCCCAGGAGACTCCAACAggctgggc--gcggc i calJac3.chr15 I 10 I 315 s canFam3.chr34 24745633 246 - 42124431 GTGGACTTACAGCACCATTTTTAC---------AGTTTCCTGTAACATAGCTAAACCATAATCTA----TTTCATCTCTCACTGGCGGGGATTTTTCCCTGTGAAAAGAAGCTGGTCCCTGGAGGACCTTGGGCTTCTTCAGATCTTCCCTCCAGCAGGGTGCTCTTCCGTCACTGAGGGGTCCTTTCCCCCACTTTCCAGGTGACCTCTTGGTCCCTTCAGAGTCCATCTCCAGGAAACTCC--TG-ACTGAGGAGGCACT i canFam3.chr34 C 0 C 0 a score=551473.000000 s hg38.chr3_KI270781v1_alt 7224 185 + 113034 GTCCTTGCCCGTCCTCCACGGGCGAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCCAGAGGCCTGGGCTGCGCGCTCCCCGCGCTCCTGCGCAGGCTCTACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTCCGGACCTG-------ACGGGCAAGC---------------CCTGACCTGCC-TTTCATCCCGCTGATGCTCG s panTro4.chr3 13757573 185 - 202329955 GTCCTTGCCCGTCCTCCACGGGCGAG-ACGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCCAAAGGCCTGAGCTGCGCGCTCCTCGCGCTCCTGCGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTCCGGACCTG-------ACAGGCAAGC---------------CCTGACCTGCC-TTTCATCCCGCTGATGCTCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92514288 185 + 135191526 GTCCTTGCCCGTCCTCCACGGGCAAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCCAGAGGCCTGGGCTGCGCGCTCCCCGCGCTCCTGCGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTCCAGGCCTG-------ACGGGCAAGC---------------CCTGACCTGCC-TTTCATCCCGCTGATGCTCG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14295327 176 - 123690457 ---------CGTCCTCCACGGGCGAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCCAGAGGCCTGGGCTGCGCGCTCCCCGCGCTCCTGCGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCACTCCTGACCTG-------ACGGGCAAGC---------------CCTGACCTGCC-TTTCATCCCGCTGATGCTCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580628 185 + 192599291 GTCCTTGCCGGTCCTCCACGGGCGAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCGGGAGGCCTGGGCTGCGCGCTCCCGGCACTCCTGTGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTCCAGACCTG-------ACGCGCAAGC---------------CCTGACCTGCC-TTTCATCCCGTTGATGCTCG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103217160 185 - 192460366 GTCCTTGCCGGTCCTCCACGGGCGAG-ATGCGTTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCGGGAGGCCTGGGCTGCGCGCTCCCGGCACTCCTGTGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTCCAGACCTG-------ACGCGCAAGC---------------CCTGACCTGCC-TTTCATCCCGTTGATGCTCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101018637 185 + 187378091 GTCCTTGCCCGTCCTCCACAGGCGAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCGGGAGGCCTGGGCTGCGCGCTCCCGGCGCTCCTGTGCAGGCTCCACTGGGA------------------------GCC----------------CCTCCAGGGCGCAGTTCAGACCTG-------ACGCGCAAAC---------------CCTGACCTGCC-TTTCATCCCGTTGATGCTCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4886180 185 + 91754291 GTCCTTGCCCGTCCTCCACGGGCGAG-ATGCGCTGTCCACCTCCGCCCTCCTCTTGCTCCACCTGGCGGGAGGCCTGGGCTGCGCGCTCCCGGCGCCCCTGTGCAGGCTCCACTGGGA------------------------ACC----------------CCTCCAGGGCGCAGTCCAGACCTG-------ACGCGCAAGC---------------CCTGACCTGCC-TTTCATCCCGTTGATGCTCG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92363010 204 - 98464013 GTCCTCGCCGGTCCTCCGTCCTCCA----GCGCTGTCCA-CTCCGCTCTCCCCTTGCTCTACCT-GCCGGAAGCCTGGGCTGCACGCCCCCCGTGCTCCTGGGCTTGCTCCAGTAGGAACCTCTGGCCACGGTCCAAGCCAGGCC----------------CCTCCAGTGCGCCGTCCAGACCCA-------ATG-GCAAGC---------------CCGGACCTGCCTTTTCATCCCGCCGATGATCG i calJac3.chr15 I 315 I 756 s canFam3.chr34 24745879 217 - 42124431 ATCCTTGCCTGTTCTCCACAGCTGAGTGCACACTGCCCACCTCCCTCATCACCTTCCCCCACCTGGCCTG------GAGCTGAACACTTCTCTC-CCCTTATGGAGGCTCCAAGCAGA------------------------GCCCTTTGCCCTCCCAGGTCCTGCAGGGCCTAGTACCCCCCTTTGCACACACCCCCAGGCCAATTCCTCCTCCTTCCTGAAATTCC-TTTCATCCTGCTAGTCCACA i canFam3.chr34 C 0 C 0 a score=1672.000000 s hg38.chr3_KI270781v1_alt 7409 2 + 113034 -CG s panTro4.chr3 13757758 2 - 202329955 -CG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92514473 2 + 135191526 -CG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14295503 2 - 123690457 -CG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580813 2 + 192599291 -CG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103217345 2 - 192460366 -CG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101018822 2 + 187378091 -CG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4886365 2 + 91754291 -CG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24746096 2 - 42124431 TT- i canFam3.chr34 C 0 C 0 e calJac3.chr15 92363214 756 - 98464013 I a score=1697231.000000 s hg38.chr3_KI270781v1_alt 7411 618 + 113034 --------------------CCCAGCTCCCTGTGAA-----TACCCACTGATTGCCC-------CCGGAGTCTCCCCGTTAGGCCCTCCCGCACCTCTTACCCCTTCCTC-------CCCTTCCT-----GGCC-------TCCCCAGCT--CCCTCA-------CCCGCCT-TCTAGAAG-----------------------CATCCTCCCCCTTCTCACCCACCTCTCT-----------------------------------------------------------ACTCCTCCCTTCCCGACTTCCTCAATTCCCACCTCCCCCCCAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCCGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCAGCCTGCCAGCCGCC--------AGGTAGCGCGAATGGAGCGCGGGGCGCCGCGCGCTGCGGGC--------------------------GGGTGAAGCCGGAATCGGGG-----------------CGGCGGCTCGGCCCCC-GGCCCCCGGC------CCCGGG---GAGCCCAGAGCGACTAGTCGGGCAGGAAA--AGAATGACGGTGACGTGACCACTCTGACCCCGAGGACTCTCTGGGCTCTGGCGGGCGCTGGGCTCGGCGGATCTGAGTGCGTAGGAAGGGCGATGGGCGCTCAGTCCCCGAGGATCACCTGCGGGACCCTTTGGG-GGCACCTGCCGGAGCAGCTGGCCCTGCG-------------ACGGGTCCCACCGCGCCCTCAGCAGCAAGGCGGTTCTCCCTTTATAGAG s panTro4.chr3 13757760 617 - 202329955 --------------------CCCAGCTCCCTGTGAA-----TACCCACTGATTGCCC-------CCGGAGTCTCCCCGTTAGGccctcccgcacctcttaccccttcctc-------cccttctt-----ggcc-------tccccagct--ccctca-------cccgcct-tctagaag-----------------------catcctcccccttctcacccacctctct-----------------------------------------------------------actcctcccttcccgacttcctcaattcccacctcccccccAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCCGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCAGCCTGCCAGCCGCC--------AGGTAGCGCGAATGGAgcgccgggcgccgcgcgctgcgggc--------------------------gggTGAAGCCGGAATCGGGG-----------------CGGCGGCTCGGACCCC-GGTCCCCGGC------CCCGGT---GAGCCCAGAGCGACTAGTCGGGCAGGAAA---GAATGACGGTGACGTGACCACTCTGACCCCGAGGACTCTCTGGGCTCCGACGGGCGCTGGGCTCGGCGGATCTGAGCGCGTAGGAAGGGCGATGGGCGCTCAGTCCCCGAGGATCACCGGCGGGACCCTCTGGG-GGCACCTGCCGGAGCAGCTGGCCCTGCG-------------ACGGGTCCCACCGCGCCCTCAGCAGCAAGGCGGTTCTCCCTTTATAGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92514475 610 + 135191526 --------------------CCCAGCTCCCTGTGAA-----TACCCTCTGATTGACC-------CCGGAGTCTCCCCGTTAGGccctcccgcacctcttaccccttcctc-------tcctccct-----ggcc-------tccccagct--ctctca-------cccgcct-tctagaag-----------------------catcctcccccttctcacccacctctct-----------------------------------------------------------actcctcccttcccgacttcctcaattcccacctcccccccAGATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCCGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCCGCCTGCCGGCCGCC--------AGGGAGCGCGAATGGAGCGCGGGGCGCCGCGCGCTGCGGGC--------------------------AGGTGAAGCCGAAATCGGGG-----------------CGGCGGCT-------A-GGTCCCCGGC------CCCGGG---GAGCCCAGAGCGACTAGTCGGGCAGGAAA---GAATGACGGTGACGTGACCACTCTGACCCCGAGGACTCGCTGGGCTCCGGCGGGCGCTGGGCTCCGCGAATCTGAGCGCGTGGGAAGGGCGATGGGCGCTCAGTCCCCGAGGATCACCGGCAGGACGCTCTGGG-GGCACCTGCCAGAGCAGCTGGCTCTGCG-------------ACGGGTCCCACCGCGCCCTCAGCTCCAAGGCGGTTCTCCCTTTATAGAG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14295505 580 - 123690457 --------------------CCT---------------------------ATTGCCC-------CCGGAGTCTCCCCGTTAGGCGCTCCCGCACCTCTTACCCCTTCC----------------T-----GGCC-------TCCCCCGCT--CCCCCA-------CCCGCCT-TCTAGAAG-----------------------CATCCTCCCCCTTCTCACCCACCTCTCT-----------------------------------------------------------ACTCCTCCCTTCCCGACTTCCTCAATTCCCACCTCCCCCCCAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCCGGTGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGTGGGGGCAGCCTGCCAGCCGCC--------AGGGAGCGCGAATGGAGTGCGGGGCGCCGCGCGCTGCGGGC--------------------------GGGTGAAGCGGGAATCGGGG-----------------CGGCGGCT-------C-GGCCCCCGGC------CCCGGG---GAGCCCAGAGCCACTAGTCGGGCAGGAAA---GAATGACGGTGACGTGACCACTCTGACCTCGGGGACTCCCTGGGCTCCCGCGGGCTCTGGGCTCGGCGGATCTGAGCGCGTGGGAAGGGCGATGGGCGCTCAGTCCCCGAGGATCACCGGCGGGACCCTCTGGG-GGCACCTGCCAGAGCAGCTGGCCCTGCG-------------ACGGGTCCCACCGCGTCCTCAGCAGCAAGGCGGTTCTCCCTTTATAGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103580815 608 + 192599291 --------------------CCCAGCTCCCTGCGAA-----TATCCCCTGATTGCCC-------CCGGAGTCTCCCCGTTAGGCcctcctgcacctcctaccccttcctc-------cccttcct-----ggcc-------tcccccgct--ccccca-------cccgcct-tctagaag-----------------------cattctcccccttctcacccacctctct-----------------------------------------------------------actcctccCTTCCCGACTTCCTCAATTCCCACCTCCGCCCCAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCAGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCCATCTGCTCGTTGCA--------GGGGAGCGCGAATGGAGCGCGGGGCGC--CACGCTGAGGGC--------------------------GGGTGAAGCGGGAATCGGGG-----------------CGGCGGCT-------C-GGCCCCGGGT------CCCGGG---GAGCCCGGAGCGACTAGTCGGGCAGCAAA---GAATGACGGTGACGTGACCACTCTGACCCCGAGGGCCCGCTGGGCTCCCGCGGGCGCTGGGCTCGGCGGATCTGAGCGCGTGGGAAGGGAGGTGGGCGCTCAGTCCCTGAGGATCACCGGCGGGACCCTCTGGG-GTCACCTGCCGCAGTAGCTGGCCGTGCG-------------ACGGGCCCCACCGCGCCCTCAGCAGCAAGGTGGTTCTCCCTTTATAGAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103217347 608 - 192460366 --------------------CCCAGCTCCCTGCGAA-----TATCCCCTGATTGCCC-------CCGGAGTCTCCCCGTTAGGCCCGCCTGCACCTCCTACCCCTTCCTC-------CCCTTCCT-----GGCC-------TCCCCCGCT--CCCCCA-------CCCGCCT-TCTAGAAG-----------------------CATTCTCCCCCTTCTCACCCACCTCTCT-----------------------------------------------------------ACTCCTCCCTTCCCGACTTCCTCAATTCCCACCTCCGCCCCAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCAGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCCATCTGCCCGCTGCA--------GGGGAGCGCGAATGGAGCGCGGGGCGC--CACGCTGAGGGC--------------------------GGGTGAAGCGGGAATCGGGG-----------------CGGCGGCT-------C-GGCCCCGGGT------CCCGGG---GAGCCCGGAGCGACTAGTCGGGCAGCAAA---GAATGACGGTGACGTGACCACTCTGACCCCGAGGGCCCGCTGGGCTCCCGCGGGCGCTGGGCTCGGCGGATCTGAGCGCGTGGGAAGGGCGGTGGGCGCTCAGTCCCTGAGGATCACCGGCGGGACCCTCTGGG-GTCACCTGCCGCAATAGCTGGCCGTGCG-------------ACGGGCCCCACCGCGCCCTCAGCAGCAAGGTGGTTCTCCCTTTATAGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101018824 608 + 187378091 --------------------CCCAGCTGCCTGCGAA-----TATCCCCTGATTGCCC-------CCGGAGTctccccgttaggccctcctgcacctcctaccccttcctc-------cccttcct-----ggcc-------tcccccact--ccccca-------cccgcct-tctagaag-----------------------cattctcccccttctcacccacctctct-----------------------------------------------------------actcctcccttcccgacttcctcaattcccacctcccccccAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCGGCAGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCGGTGGGGT-GGGGCCATCTGCCCGCTGCA--------GGGGAGCGCGAATGGAGCGCAGGGCGC--CACGCTGAGGGC--------------------------GGGTGAAGCGGGAATCGGGG-----------------CGGCGGCT-------C-GGCCCCGGGT------CCCGGG---GAGCCCGGAGCGACTAGTCGGGCAGCAAA---TAATGACGGTGACGTGACCACTCTGACCCCGAGGGCCCGCTGGGCTCCCGCGGGCGCTGGGCTCGGCGGATCTGAGCGCGTGGGAAGGGCGGTGGGCGCTCAGTCCCCGAGGATCACCGGCGGGACCCTCTGGG-GTCACCTGCCGCAGTAGCTGGCCGTGCG-------------ACAGGCCCCACCGCGCCCTCAGCAGCAAGGTGGTTCTCCCTTTATAGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4886367 609 + 91754291 --------------------CCCAGCTCCCTGCGAA-----TATCCCCTGATTGCCC-------CCGGAGTCTCCCCGTTAGGCCCTCCTGCACCTCCTACCCCTTCCTC-------CCCTTCCT-----GGCC-------TCCCCCGCT--CCCCCA-------CCCGCCT-TCTAGAAG-----------------------CATTCTCGCCCTTCTCACCCACCTCTCT-----------------------------------------------------------ACTCCTCCCTTCCCGACTTCCTCAATTCCCACCTCCCCCCCAAATTCCAGTCCTCTCCCTGGGAAAGAGAAAGCTGCAGGGGTC-CCACCCTGGCTGTGTGTGGCCCGCAGTGGGGT-GGGGCCATCTGCCCGCTGCA--------GGGGAGCGCGAATGGAGCGCGGGGCGC--CACGCTGAGGGC--------------------------GGGTGAAGCGGGAATCGGGG-----------------CAGCGCCT-------CGGGCCCCGGGT------CCCGGG---GAGCCCGGAGCGACTAGTCGGGCAGCAAA---GAATGACGGTGACGTGACCACTCTGACCCCGAGGGCCCGCTGGGCTCCCGCGGGCGCTGGGCTCGGCGGATCTGAGCGCTTGGGAAGGGCGGTGGGCGCTCAGTCCCCGAGCATCACCGGCGGGACCCTCTGGG-GTCACCTGCCGCAGTAGCTGGCCGTGCG-------------ACAGGCCCCACCGCGCCCTCAGCAGCAAGGTGGTTCTCCCTTTACAGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92363970 523 - 98464013 --------------------CCCAGATTCCTGGGAA-----CACCGCCTTCCTCCCTCCCATTGCCAGAGTTTCCCCG--AGGCCC----GCACC----------TCCTC-------CCCTTGCT-----GGCC-------TCCCC-GCT--CCCCCG---------CACCT-GCTAGAAG-----------------------C-CGCGACCCCTTCTCACCCGCCTCCCC-----------------------------------------------------------ACTCCTC----CCCAACTTCCTCAATTTCCACCTCCCCACCAAATTCCAGTCCTCTCCCTGGGAAAGGGAGAGCCGCTGGGGTC-CCACCCTGGCTGTGTGTGGCCCGTGGTGGGGT-GTGGCCGCCTTCCCGCCACG--------GGCGAGCGCGAATGGA-----------------------GC--------------------------TGGTGAAGCTGG-----------------------------GGCT-------G-G------------------GGG---GAGCCCAGGGAGACTCCTCGGGCGGGAAA---GAGTGACGGTGACGTGACCGCTCTGACCCCGAGTACTTACTGGGCTCCAGCGGGCGCTGGTCTGGGCCGATCTGAGCGCGTGGGAAGGGCAGTGGGAGCTCAGTCCCCGAGGATCACAGGCAGGACC-----------------------AGCCGGCCCTGCC-------------AC-GGTCCCACCGGGCCCTCAGCAGCAAGGGGACTCTCCCTTTATAGAG i calJac3.chr15 I 756 I 325 s canFam3.chr34 24746098 767 - 42124431 CCCTTCTCATTCCTGTAACCCCTAGCTGGATCTGAAAGCCCCCCCCCCCCATTGCTC-------TCTGGATCTCCTCTTTGAGCCCTACGTCATCTCCCTATCCTTCCCCTGTCTCTCCCTTCCTCCTGAGGCCCATTAGGTCCCTACCTGAGCCCCATTAGGTCCCCACCTCTCTGGGGGGGAAACCTGGCCTCAACCCCTCCCTTTCTCCCCCCTTTGGTCTGCCTTTTCCCACGGAAAACCCCCCACATCTGAGGAACAAGCTTCCANNNNNNNNNNTCATTGTGGGGATTCCTCCCTT-TCAACTTCCTCAATTCCCACCTCCCCCCC-TTTTGCAGCCCTGCCCCTGGGAAAGGACAAGCTCCTGGAGTCTCCACCCTGCCTGTGTGTGGCCCGCGGTGGGGTGGGGGCTGCCCACCCCTCTCCCCCGGCCTGGGAAGGGTGAATGGAGCCCTGTGTGCCCCGCTCTGTGGGCGGGACGTCAATGGCCTGTGTGTCACTGGGTGAAAAGAGGCCCAAGGACCGCTGCGAGAGGGCCCTGTGAAT-------T-AGCCCCCGCCCACCCGCCCAGGCGTGAACCCA------------AGGCAGGAGACCAGAGTGCAGGGGGGGTGGCGCCCCGGATC----AGAGCCAC--GGTCCCCACGGG--------------------------GGGGAAGGGC--TGCGTGGCCAGGCC----GGACCC------GGACCCTCGGAGCTGCACCTGCCGGGGCGCCCCCCCCCACCCCGGGGAAGGACTGCGGGTCCCAGAGCGCCCTCCGCAGTAAAGCTTTTCTCCCTTTATAAAC i canFam3.chr34 C 0 C 0 a score=247644.000000 s hg38.chr3_KI270781v1_alt 8029 72 + 113034 GTTTTACGTGCGTTTGTGGGGG--GTG-TTCtcaaaacaatacaaataagcttccattgtcaccgatcaaaatag s panTro4.chr3 13758377 72 - 202329955 GTTTTACGTGCGTTTGTGGGGA--GTG-TTCtcaaaacaatacaaataagcttccattgtcaccgatcaaaatag i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515085 72 + 135191526 GTTTTACGTGCGTTTGTGGGGA--ATG-TTCtcaaaacaatacaaataagcttccattgtcaccgatcaaaatag i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296085 72 - 123690457 GTTTTACGTGCATTTGTGGGGA--GTG-TTCCCaaaacaatacaaataagcttccattgtcacagatcaaaatag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103581423 72 + 192599291 GTTTTATGTGCATTTGTGGGGA--GTG-TTCtcaaaacgatacaaataagcttccattgtcaccgatcaaaatag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103217955 72 - 192460366 GTTTTATGTGCATTTGTGGGGA--GTG-TTCtcaaaacgatacaaataagcttccattgtcaccgatcaaaatag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101019432 72 + 187378091 GTTTTATGTGCATTTGTGGGGA--GTG-TTCTCAAAACGATACAAATAAGCTTCCATTGTCACCGATCAAAATAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4886976 74 + 91754291 GTTTTATGTGCGTTTGTGGGGAGTGTG-TTCtcaaaacgatacaaataagcttccatcgtcaccgatcaaaatag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92364818 72 - 98464013 GTTTTATGTGCATTTCGGGGGA--GTG-TTCTAAAAaaaatacaaataagcttccattgtcgctgatcaaaatag i calJac3.chr15 I 325 C 0 s canFam3.chr34 24746865 73 - 42124431 GAATGATAAGCAGCTGGGGAAC--GTGTTTCTCAAAGTAATACAAATAAGCTTCTATTCTCACCGGCCAAAATAG i canFam3.chr34 C 0 I 51 a score=52926.000000 s hg38.chr3_KI270781v1_alt 8101 17 + 113034 taagggctttttaaaag s panTro4.chr3 13758449 17 - 202329955 taagggctttttaaaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515157 17 + 135191526 taagggctttttaaaag i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296157 17 - 123690457 taagggctttttaaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103581495 17 + 192599291 taaaggctttttaaaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218027 17 - 192460366 taaaggctttttaaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101019504 17 + 187378091 TAAAGGCTTTTTAAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887050 17 + 91754291 taaaggctttttaaaag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92364890 17 - 98464013 taagggcttattaaaag i calJac3.chr15 C 0 C 0 e canFam3.chr34 24746938 51 - 42124431 I a score=787685.000000 s hg38.chr3_KI270781v1_alt 8118 293 + 113034 gaaactgtttagggctgacagagctacagaggaagtggagtgatccgggcacagtcagggacgggggag--------gggggcggaactgg------tctagctgttttggcaaaatgtaataatacagag---ttagagtctttgaatgctcacact----gtttgatattgtggttctagtagtggtcatgcatcagaagaaataatcccaaatattccccc--aaagcttttatggacacagacattctttgcactgaaaaatgagaaaaaaaattatctaaaattggaatcaactagttgggcactgataaa s panTro4.chr3 13758466 301 - 202329955 gaaactgtttagggctgacagagctacagaggaagtggagtgacccgggcacagtcagggacgggggagttggggtgggggggggaactgg------tctagctgttttggcaaaatgtaataatacagag---ttagagtctttgaatgctcacact----gtttgatattgtgattctagcagtggtcatgcatcaaaagaaataatcccaaatactccccc--aaagcttttttggacacagacattctttgcactgaaaaatgagaaaaaaaattatctaaaattggaatcaactagttgggcactgataaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515174 287 + 135191526 gaaactgttaagggctgacagagctacacaggaaatggagtcacccgggcaccgtcggggaca--------------ggggggcaaactgg------tctagctgttttggcaaaatgtaataatacagag---ttagagtctttgaatgctcacact----gtttgatgctgtgattctagtagtggtcatgcatcaaaagaaataatcccaaatattccccc--aaagcttttttggacacagacattctttgcactggaaaatgagaaaaaaaattatctaaaattggaatcaactagttgggcactgataaa i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296174 289 - 123690457 gaaactgtttagggctgacagagctacagaggaaatggagtcacccgggcaccgtcggggac---------------gggggaggaactggtctagctctagctcttttggcaaaatgtaataatacagag---ttagagtc--tgaatgctcacact----gtttgatattgtgattctagtagtggtcatgcatcaaaagaaataatcccaaatattccccc--aaagcttttttggacacagacattctttgcactgaaaaatgc-aaaaaaaattatctaaaattggaatcaactagttgggcactgataaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103581512 283 + 192599291 gagactgtttagtgccgacagagctgcagaggaaatggagtcacccgggcaccgtcagggac---------------agggggcgaactgg------tctagctctttt-gcaaaatgtaataatacagag---ttagagtctttgagtgctcacact----gtttgatagtgtgattctagtggtggacatgcatcaaaataaataatcccaaatattccccc--aaagcttttttggacacagacattctttgcactgaaaaatga-gggaaaaattgtctaaaattgaaatc-actagttgggcactgataaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218044 283 - 192460366 gagactgtttagtgccgacagagctgcagaggaaatggagtcacccgggcaccgtcagggac---------------agggggcgaactgg------tctagctctttt-gcaaaatgtaataatacagag---ttagagtctttgagtgctcacact----gtttgatagtgtgattctagtggtggacatgcatcaaaataaataatcccaaatattccccc--aaagcttttttggacacagacattctttgcactgaaaaatga-gggaaaaattgtctaaaattgaaatc-actagttgggcactgataaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101019521 283 + 187378091 GACACTGTTTAGTGCCGACAGAGCTGCAGAGGAAATGGAGTCACCCGGGCACCGTCAGGGAC---------------AGGGGGCGAACTGG------TCTAGCTCTTTT-GCAAAATGTAATAATACAGAG---TTAGAGTCTTTGAGGGCTCACACT----GTTTGACAGTGTGATTCTAGTGGTGGAcatgcatcaaaataaataatcccaAATATTCCCCC--AAAGCTTTTTTGGACACAGACATTCTTTGcgctgaaaaatga-gaaaaaaattgtctAAAATTGAAATC-ACTAGTTGGGCACTGATAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887067 271 + 91754291 gagactgtttagtgccgacagagttgcagaggaaatggagtcacttgggcaccgtcagggac---------------agggggcgaactgg------tctagctctttt-gcaaaatgtaataatacag-------agagtctttgagggctcacac--------tgatagtgtgattctagtggtggacatgcatcaaaataaataatcccaaatattccccc--aaagcttttttgggc----acattctttgcactgaaaaatga-gaaaaaaattgtctaaaattgaaatc-actagttgggcactgataaa i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92364907 276 - 98464013 gagcccgtttcgtgctgacagagcagcagaggaaatggagtca-ctgggcaccgtggggggc---------------agggaggggactg-------tccagctcttttggcgaaatgtaataatatagag---tc--------tgaatgctcacacc----attcgatattgtgattctggctgtgga-atgcatcaaaagaagtaatcccaaatattccccccaaagttttttttgggcacagacattctttgcactgaaacatga-gaaacaatttatttaaaattggaatcaacaagttgggcactgataaa i calJac3.chr15 C 0 C 0 s canFam3.chr34 24746989 235 - 42124431 GAGAATATTTAATGCTGACAACGCTGCGGAAGAAACGGTGGCACCAGTGCTCCGCTGGGCGGTG-------------TGAGGGCGAACTGG------TCCAGCTC---------------------CGGAGCACTGAGAGCCTTGGGGCGCTCACACCTGTAACCTGCTACTGTAATGCTACCTGTGAAGACGTATCTGAAGGAATAATCCCGAATATTCCCCC--AA-----------GTACAGTTATCCTTTGTACTGAAAAATGA---------------------GAAATCACCCA-------AGTGACAGA i canFam3.chr34 I 51 C 0 a score=325146.000000 s hg38.chr3_KI270781v1_alt 8411 114 + 113034 tacattatggtgtatccaca--gttgtgatatcattctgtcattgataacatttctgaaaagttttcgatagtataaggaaattttctcattctgtaaaaggcacaaggtgagttt s panTro4.chr3 13758767 114 - 202329955 tacattatggtgtatccaca--gttgtgatatcattccgtcattgataacatttctgaaaagttttcgatagtataaggaaattttcttattctgtaaaaggcacaaggtaagttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515461 114 + 135191526 tatattatggtgtatccaca--gttgtgatatcattctgtcattgataacatttctgaaaagttttcgataatataaggaaattttcttcttatgtaaaaggcacaacgtgagttt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296463 114 - 123690457 tatattatgatgtatccaca--gttgtgatatcattctgtcattgataatatttctgaaaagtttttaataatatgaggaaatttccttattatgtaaaaggcacaaggtgagttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103581795 114 + 192599291 tatattatggtgtatccaca--gttgtgatatcattctgtcattgataacatttctgaaaagtttttaagtatataaggaaattttcttattatgtaaAAGGCACAAGGTGAGTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218327 114 - 192460366 tatattatggtgtatccaca--gttgtgatatcattctgtcattgataacatttctgaaaagtttttaagtatataaggaaattttcttattatgtaaAAGGCACAAGGTGAGTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101019804 114 + 187378091 TATATTATGGTGTATCCACA--GTTGTGATATCATTCTGTCATTGATAACATTTCTGAAAAGTTTTTAAGTATATAAGGAAATTTTCTTATTATGTAAAAGGCACAAGGTGAGTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887338 113 + 91754291 tatattatggtgtatccaca--gttgtgatatcattctgtcattgataacatttctgaaaagtttttaa-tatataaggaaattttcttattatgtaaaaggcacaaggtgagttt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92365183 114 - 98464013 tatattaaggtgtgtccacacggttgtgatattatcctatcattaataaCATTTCTGAAATGTTTTTAATAACGTAAGGAAATGTTCTTGTTACGT--ACGACACAAGGTGAGTTT i calJac3.chr15 C 0 C 0 e canFam3.chr34 24747224 0 - 42124431 C a score=571291.000000 s hg38.chr3_KI270781v1_alt 8525 176 + 113034 gtatacacaagataatcacaagtatataaactaagcataGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAATGGGTGC-TTTT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTATTTCAGATACATATCAAGGTATAGAGAAGAACTTACCCATCAATAATCATGGGGAATG s panTro4.chr3 13758881 176 - 202329955 gtatacacaagataatcacaagtatataaactaagcataGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAATGGGTGC-TTTT---TTTTTCTTTTGAAAAAACTGTTTTATGAACTATTTCAGATACATATCAAGGTATAGAGAAGAACTTACCCATCAATAATCATGGGAAATG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515575 177 + 135191526 gtatacacaagataatcacgagtatataaactaagcataGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAATGGGTGCTTTTT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTGTTTCAGATATATATCAAGGTATAGAGAAGAACTTACCCATCAATAATCATGGGAAATG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296577 176 - 123690457 gtatacacaagataattacaaGTATATAAACTAAGCATAGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAACGGGTGC-TTTT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTATTGCAGATATATATCAAGATATAGAGAAGAACTTACCCATCAATAATCATGGGAAATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103581909 176 + 192599291 GTATAC-CAAGATCATCACAAGCATATAAACTAAGCATAGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAATGGGTGCTCTTT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTATTTCAGATATATATCAAGGTATAGAGAAGAACTTACCCATCAATAATCACGGGAAATG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218441 176 - 192460366 GTATAC-CAAGATCATCACAAGCATATAAACTAAGCATAGTGGAAAGACTGGAAGAAATACATTTTAAATAGGAATGGGTGCTCTTT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTATTTCAGATATATATCAAGGTATAAAGAAGAACTTACCCATCAATAATCACGGGAAATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101019918 176 + 187378091 GTATAC-CAAGATCATCACAAGCATGTAAACTAAGCATAGTGGAAAGActggaagaaatacattttaaataggaatgggtgctcttt---tttttcttttgaaaaaacttttttATGAACTATTTCAGATATATATCAAGGTATAGAGAAGAACTCACCCATCAATAATCACGGGAAATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887451 175 + 91754291 gtatac-caagatcatcacaagcatataaactaagcatagtggaaagactggaagaaatacaTTTTAAATAGGAATGGGTGCTC-TT---TTTTTCTTTTGAAAAAACTTTTTTATGAACTATTTCAGATATATATCAAGGTATAGAGAAGAACTGACCCATCAATAATCACGGGAAATG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92365297 175 - 98464013 GTATACACAAGATAATCACAAGTATATAAAAGCAGCACAGTGGAAAGACTGGAAGAAATACACCTTAAATAGACAT-GGCGCTTTTT---TTTTTCTTTTAAAAAAACTTTTTAATGAACTATTTCCAATATATATCAAGGTATGGAGAAGGACTTACCCATCAATAAGCA-GGGAAAAG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24747224 174 - 42124431 GTATATACGGGACAGTCACAAGTATATAAATCAAGCGTAG----AAGAGTGGAGGAAAATCA-GTTAAATGGAAGTAGGTGATTTTTCTCTCTTTTTTTTTTAAATACTGTTTTATGAACGATCTCAGAGTTACATTGAGATAT-GAGAATAGTTTAGCTATCACTAAGCATTAGAAATG i canFam3.chr34 C 0 I 711 a score=528600.000000 s hg38.chr3_KI270781v1_alt 8701 179 + 113034 GAGCAAC--CTCACTGCTGAAGCCCCTTAGGGACC--------CTCTTCACCACCTTCCTCACCCTCATCCCTGAGGTGACTTCTCACt--atctttattacatatgagtggattcctaaacattata-----------taag-tatttcaaacttgacatatatgacaaagtatta--tgcacactcctttgacttgctttttt s panTro4.chr3 13759057 179 - 202329955 GAGCAAC--CTCACTGCTGAAGCCCCTTAGGGACC--------CTCTTCACCACCTTCCTCACCCTCATCCCTGAGGTGACTTCTCACt--atctttattacatatgagtggattcctaaacattata-----------taag-tatttcaaacttgacatatatgataaagtatta--tgcacactcctttgacttgctttttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92515752 179 + 135191526 GAGCACC--CTCACTGCTGAAGCCCCTTAGGGACC--------CTCTTCACCCCCTTCCTCACCCTCATCCCTGAGGTGActtctcact--atctttattacatatgagtggattcctaaatattata-----------taag-tatttcaaactcgacatatatgataaagtatta--tgcatactcctttgacttgctttttt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296753 175 - 123690457 GAGCACC--CTCACTGCTGAAGCCCCTTAGGGACC--------CTCTTCATCCTCTTCCTCAGCCTCATCCCTGAGGTGACtt----ct--atctttatgacatatgagtggattcctaaacattata-----------taag-tatttcaaacttgacatatgtgataaagtatta--tgcacactcctttgacttgcttttta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103582085 167 + 192599291 GAGCACC--CTCACTGCTGAAGCCTCTTAGGGACC--------CTCTTCACCCCCCTCCTCAC------------GGTGACCTCTCACt--atctttattacatatgagtggattcctaaacattaca-----------taag-tatttcaaacttgacatatatggtaaagtacta--tgcacactcctttgacttgctttttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218617 167 - 192460366 GAGCACC--CTCACTGCTGAAGCCTCTTAGGGACC--------CTCTTCACCCCCCTCCTCAC------------GGTGACCTCTCACt--atctttattacatatgagtggattcctaaacattaca-----------taag-tatttcaaacttgacatatatggtaaagtacta--tgcacactcctttgacttgctttttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101020094 167 + 187378091 GAGCACC--CTCACTGCTGAAGCCTCTTAGGGACC--------CTCTTCACCCCCCTCCTCAC------------GGTGACCTGTCACT--ATCTTTATTACATATGAGTGGATTCCTAAACATTACA-----------TAAG-TATTTCAAACTTGACATATATGGTAAAGTACTA--TGCACACTCCTTTGACTTGCTTTTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887626 167 + 91754291 GAGCACC--CTCATTACTGAAGTCTCTTAGGGACC--------CTCTTCACCCTCCTCCTCAC------------GGTGACCTCTCACt--atctttattacatatgagtggattcctaaacattacg-----------taag-tatttcaaacttgacatatatggtaaagcacta--tgcacactcctttgacttgctttttt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92365472 172 - 98464013 CAGC-CC--TTCACTGCTAACTCCCCTTAGAGATC--------CTCCTCACC-CCTTCTTCACCCTCAA------GGTGACCTCCCAat--atctttattacatatgagtggattcctaagcattaca-----------taagttatctcaaacttgacatatatgataaagtacta--ggtacattcctttgacttgccttttt i calJac3.chr15 C 0 I 308 s canFam3.chr34 24748109 204 - 42124431 gTGCAGCGTCTTTCTGGTGAAGCCCCTCAGGGACCCTCACTTACTCCCCAGCATCACTCTCATCCCCACCCCACTGGTAACTGCTCTAtacacatttattatatatgaacaaattattgaacatcatataattctgttttaaa-tatttcaaactttacatacatgataaagtactacgtgaatacttgtgtaatttgcttttct i canFam3.chr34 I 711 C 0 a score=2557499.000000 s hg38.chr3_KI270781v1_alt 8880 765 + 113034 aagtcaacttggtgctctggggattcatccatgtcgactcatgttgatgaatctggctctggttcattcaGTAAATATGACTTAATATTTCTCAAAAACGTAGAGCAGAGCCTGGCACATGGCACTACATATGTTTGTTGTTTT--TTAAGAAAT--AAAAAAtcattttcactgcagtatagtagac----ttgttaatatcatactaaatgtattgatccattctcctgctg-tgaaaatttagaatgtttccattttgttcttattacaaacagtgccgcgatgaacattctggtctgtgtcttcttgtgcaca--tgtgagtttctatggagtgca--cctagcattgg--ccacagacattgcaagggatgcctaacttcagtgctacaaattactgcccagtcgttctccaaagcgatcttgccagcagcagatgagtcattgta----------------gtaacactcccagccctcaacactgcct---ctcatcacgtcagttcttttccagtgtaatgggtgt----ggttacttc-tcatggtttaaatttgcatttccctaattaccatggggttagaggtcaggcatttgttcctatgtttattg-------gtattttttatact-gtaaagtcttgatcataa-ctttttcctatttttctattggttgttgacattttcttgttggtttttaagaattctttataaattttgtatcttaatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttatcttataactatttgtgatgtcttt s panTro4.chr3 13759236 760 - 202329955 aagtcaacttggtgctctggggattcatccatgtcgactcatgttgatgaatctggctctggttcattcaGTAAATatgacttaatatttctcaaaaacgtagagcagagcctggcacatggcactacatatgtttgttgtttt--tTAAGAAAT--AAAAAAtcattttcactgcagtatagtagac----ttgttaatatcatactaaatgtattgatccattctcctgctg-tgaaaatttagaatgtttccattttgtgcttattacaaacagtgccgcgatgaacattctggtctgtgtcttcttgtgcaca--tgtgagtttctatggagtgca--cctagcattgg--ccacagacattgcaagggatgcctaacttcagtgctacaaattactgcccagtcgttctccaaagcgatcttgccagcagcagatgagtcattgca----------------gtaacactcccagccctcaacactgcct---ctcatca-----gttcttttccagtgtaatgggtgt----ggttacttc-tcatggtttaaatttgcatttccctaattaccatggggttagaggtcaggcatttgttcctatgtttattg-------gtattttttatact-gtaaagtcttgatcataa-ctttttcctatttttctattggttgttgacattttcttgttggtttttaagaattctttataaattttgtatcttaatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttatcttataactttttgtgatgtcttt i panTro4.chr3 C 0 I 5 s ponAbe2.chr9 92515931 764 + 135191526 aagccaacttggtgctccagggattcatccatgccgactcatgttgatgaatctggctctggttcattcaGTAAATatgacttaatatttctcaaaaacgtagagcagaacctggcacatggcactacacatgtttgttgtttt--tTAAGAAAT--AAAAAAtcattttcactgccgtatagtagac----ttgttaatatcatactaaatgtattgatccattctcctgctg-tgaaaatttagaatgtttccattttgttcttattacaaacagtgctgcgatgaacattctggtc--tgtcttcttgtgcaca--tgtgagtttctatggagtgca--cctagcactgg--ccacaggcattgcaagggatgcctaacttcagtgctagaaattactgcccagtcgttctccaaagtgatcttgccagcagcagatgagtcattgca----------------gtaatactgccaaccctcaacactgcct---ctcatcaggtcagttcttttccagtgtaatgggtgt----ggttacttc-tcatggtttaaatttgcatttccctaattaccatggggttagaggtcaggcatttgttcctatgtttattg-------gtattttttatact-gtaaagtcttgatcataacctttttcctatttttctattggttgttgtcattttcttgttggtttttaagaattctttataaattttgtatcttaatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttatcttataactttttgtgatgtcttt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14296928 770 - 123690457 aagccaacttggtgctccggggattcacccatgccgactcatgttgatgaatctggctctggttcattcaGTAAATatgacttaatgtttctcaaaaacgtagagcagagcctggcacatggcactacatatgtttgttgtttt--tTAAGAAAT--AAAAAAtcattttcactgcagtatagtagac----ttgttaatatcatactaaatgtactgatccgttctcctgttg-tgaaaatttagaatgtttccattttgttcttattacaaacagtgccgcgatgaacattctggtctgtgtcttcttgtgcaca--tgtgagtttctatggagtgca--cctagcattgg--ccacaggcattgcaagggatgactaacttcagtgctacaaattactgcccagtcgttctcctaagtgatcttgccagcagcagatgagtcattata----------------gtaatactcccaggcctcaacactgcct---ctcatcaggtccgttcttttccagtgtaatgggtgtggagggttacttc-tcatggtttaaatttgcatttccctcattaccatggggttagaggtcaggcatttgttcctatgtttattg-------gtattttttatact-gtaaagtcttgatcataacctttttcctatttttctattggttgttgtcattttcttgttggtttttaagaattctttataaattttgtatcttaatctttcatcagatggatgagctgcaaatattgtcattcactccatggcttatcttataactttttgtgatgtcttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103582252 754 + 192599291 aagccaacttggtgctctggggattcatccatgccaacttgtgttgatgaatctggctctggttcattgagtaaatatgacttaatatttatcaaaaacatagagcagagcctggcacatggcactacataggtgtgttgtttt--tTAAGAAATAAAAAAAAtcattttcactgcaatatagtagactg--ttgctaatatcatactaaatgtactgatccattctcctg----------------------ccattttgttcttattacaaacagtgccacgatgaacattctggtctgtgtcttcttgtgcacacgtgtgagtttctatggagtgca--cctagcattgg--ccacaggcgttgcaagggatgcctaatttcagtgctacaaattactgcccagtcgttctccaaagtgatcttgtcagcagcagatgagtcattgta----------------gtaatactcccagccctcaacactgcct---ctcatcaggtcagttcttttccagtgtaatgcgtgtggagggttacttc-tcatggtttaaatttgcatttccctcattactatggggttagaggtcaggcatgtgttcatatgtttattg-------gtattttttatact-gtaaagtcttgatcataa-ccttttcctatttttctattggttgttgtcattttcttgttgctttttaagaattctttatatattttgtatcttcatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttgtcttgtaactttttgtggtgtcttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103218784 754 - 192460366 aagccaacttggtgctctggggattcatccatgccaactcgtgttgatgaatctggctctggttcattGAGTAAATatgacttaatatttatcaaaaacatagagcagagcctggcacatggcaCTACATAGGTTTGTTGTTTT--TTAAGAAATAAAAAAAAtcattttcactgcaatatagtagactg--ttgctaatatcatactaaatgtactgatccattctcctg----------------------ccattttgttcttattacaaacagtgccacgatgaacattctggtctgtgtcttcttgtgcacacgtgtgagtttctatggagtgca--cctagcattgg--ccacaggcgttgcaagggatgcctaatttcagtgctacaaattactgcccagtcgttctccaaagtgatcttgccagcagcagatgagtcattgta----------------gtaatactcccagccctcaacactgcct---ctcatcaggtcagttcttttccagtgtaatgcgtgtggagggttacttc-tcatggtttaaatttgcatttccctcattactatggggttagaggtcaggcatgtgttcatatgtttattg-------gtattttttatact-gtaaagtcttgatcataa-ccttttcctatttttctattggttgttgtcattttcttgttgctttttaagaattctttatatattttgtatcttaatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttgtcttgtaactttttgtggtgtcttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101020261 774 + 187378091 AAGCCAACTTGGTGCTCCGGGGATTCATCCATGCCAACTCGTGTTGATGAATCTGGCTCTGGTTCATTGAGTAAATATGacttaatatttatcaaaaacatagagcagagcctggcacatggcaCTACAtaggtttgttgtttt--ttaagaaat-aaaaaaatcattttcactgCAATATAGTAGACTG--TTgctaatatcatactaaatgTACAGATCCATTCTCCTGTCG-TGAAAATTTAGaatgtttccattttgttcttaTTACAAACAGTGCCACGATGAACATTCTGGTCTGTGTCTTCTTGTGCACACGTGTGAGTTTCTATGGAGTGCA--CCTAGCATTGG--CCACAGGCATTGTAAGGGATGCCTAATTTCAGTGCTACAAATTACTGCCCAGTCGTTCTCCAAAGTGATCTTGCCAGCAGCAGATGAGTCATTGTA----------------GTAATACTCCCAGCCCTCAACACTGCCT---TTCATCAGGTCAGTTCTTTTCCAGTATAATGCGTGTGGAGGGTTACTTC-TcatggtttaaatttgcatttccctcattaCCATGGGGTTAGAGGTCAGGCATGtgttcatatgtttattg-------gtatTTTTTATACT-GTAAAGTCTTGATCataa-ccttttcctttttttctattggttgttgtcattttcttgttgctttttaagaattctttatatattttgtatcttaATCTTTCACCAGATGGATGAGTTGCAAATATTGTCATTGACTCCATGACTTGTCTTGTAACTTTTTGTGGTGTCTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4887793 775 + 91754291 aagccaacttggtgctccggggattcatccatgccaactcgtgttgatgaatctggctttggttcattGAGTAAATatgacttaatatttatcaaaaacatagagcagagcctggcacatggcaCTACATAGGTTTGTTGTTTT--TTAAGAAATAAAAAAAAtcattttcactgcaatatagtagactg--ttgctaatatcatactaaatgtactgatccattctcctgccg-tgaaaatttagaatgtttccattttgttcttattacaaacagtgcctcgatgaacattctggtctgtgtcttcttgtgcacacgtgtgagtttctatggagtgca--cctagcattgg--ccacaggcattgcaagggatgcctaatttcagtgctacaaattactgcccagtcgttctccaaagtgctcttgccagcagcagatgagtcattgta----------------gtaatactcccagccctcaacactgcct---ctcatcaggtcagttcttttccagtgtaatgcgtgtggagggttacttc-taatggtttaaatttgcatttccctcattaccatggggttagaggtcaggcatgtgttcatatgtttattg-------gtattttttatact-gtaaagtcttgatcataa-ccttttcctatttttctattggttgttgtcattttcttgttgctttttaagaattctttatatactttgtatcttaatctttcatcagatggatgagttgcaaatattgtcattcactccatggcttgtcttataactttttgtggtgtcttt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92365952 763 - 98464013 aagccaacctgatgctctgtggattcatccatgctgactcatgtggatgaatctggctctggttcattcaGTCa--atgacttaatatggatc-aaaacgtagagcagagcctggcacatggcactacatatgtttgttgtttt--tTAAGAAAT--AAAAAAtcattttcaccgcagtaaact---ctt--atgtgaatatcatactaaatgtattgatccattctcctgccg-caaaaatttagaatgtttccattttgttcttattacaaacagtgccacgatgaacattctagtctgtgtcttctcctgcacacatgtgagtttctatggcgtaca--cctaggattgg--ccacaggccttgcaagggatgcctagcttcagtgctacaaattactgcccgactgttctccaaagtgatcttaccagcagcggatgcgtcattgtt----------------ttaacattcccagccctcaacactggct---ctcatcagctctgttcttttccattggaataagtgtgcagggttacttc-tcatggtttaaatttgcatttctctcgttaccatggggttagaaatcaggcatctgttcatgtgtttattg-------gcatgtttcatcctggtaaagcctcgatcataa-ccttttcctatttttctattggttgttgtcattttcttgttggtttttagaaattctttatatattttgtgtattaatccttcatcagatggatgagttgcaaatattgtcattcattccgtggcctgtcttataact-----tgttttcttt i calJac3.chr15 I 308 C 0 s canFam3.chr34 24748313 793 - 42124431 ccatcaacgtggtgctttggggatttatccatactgactcaggttgatacatctagctcagattcattcaGtag--atgagctaatatttataaagaacttagaatagagcctggcatgtggtGCTACCTAAATTTGGGGGTCTCCTTTATATAT--AAAACttcattttcatggaagtatagtatactattgtgttaatattatattaaatttatttatccattctcctactgatgaaaatttagactg----cattttgtcctgattgctaacagtcctgctatggacagtctagtctatatctcct-gtgccta--tgagagtttctatagggtacacgcctaggattgggactgcagg-gttgcaaaggatgcctcgcttcaacattactaattacttcccacttgatctccaaagtgatcataacagcaatggatgaattattgtgtccctaatcttctttttttattttcctaatcttcatcaacacttgggattgtcagat---tttttccccaatttaatgggtttgg--tattatttctttatggttttaatttgcatttccctgattactaggaggttgga-gttaggtagctgttcatatgcttactgatcatttgtatattttattct-gtaaactcctgtccacag-cctcttcctattttgctattggttgttgtaattttcttattgatttttaagaattctttatatattttggatatgattcttttttcagatggatgtattgcaaatattatcactcaccccatggcctatcttataactttttatggtgtcttt i canFam3.chr34 C 0 C 0 a score=157745.000000 s hg38.chr3_KI270781v1_alt 9645 60 + 113034 caagacacagaaaatttacatctgcacatattctaatttacctctttctttaaagtttgt s ponAbe2.chr9 92516695 60 + 135191526 caagacacagaaaatttacatctgcacatattctagtttacctctttctttaaagtttgt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14297698 60 - 123690457 caagacacagaaaatttacatctgcacgtattctagtttacctctttctttaaagtttgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103583006 60 + 192599291 caagacacagaaaatttacatctgcacattttctagtttacctctttctttaaagtttgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103219538 60 - 192460366 caagacacagaaaatttacatctgcacattttctagtttacctctttctttaaagtttgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101021035 60 + 187378091 CAAGACACAGAAAATTTACATCTGCACATTTTCTAGTTTACCTCTTTCTTTAAAGTTTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4888568 60 + 91754291 caagacacagaaaatttacatctgcacattttctagtttacctctttctttaaagtttgt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92366715 60 - 98464013 cgagacatagaagatcgacatcttcacatattctaatttacttctttctttaaagtttgt i calJac3.chr15 C 0 C 0 s canFam3.chr34 24749106 56 - 42124431 taaggcacagaaaatgtaaatgctaatgcagcctaattta----tttcttaatcgtttgt i canFam3.chr34 C 0 C 0 e panTro4.chr3 13759996 5 - 202329955 I a score=1353273.000000 s hg38.chr3_KI270781v1_alt 9705 412 + 113034 actttggttgacatggttaaagta-ccttttcctcttccaagat-ataagtttccctacactttcttctaaaagtttttaaattttgtcgttttatatttggtcttacatctatctggatttgattctttgta-aaggtgtggtggagagatcatctttctcct-tggataataattg---tcaaagcatttattggacagctcatccttttccagtcatctgcaatgctggctttgccataaatcaaatttcccagtaagtggtggtctgtttctgggttctctattttgttac--------attgttctgtcctctagcaatactgcactc--tcacatactataacttgataataagtcttgatttctggatgagcatgtattcatac-atttttttttcaagactatctcaactatttggagttct s panTro4.chr3 13760001 412 - 202329955 attttggttgacatggttaaagta-ccttttcctcttccaagat-ataagtttccctacactttcttctaaaagtttttaaatgttgttgttttatatttggtcttacatctatctggatttgattctttgta-aaggtgtggtggagcgatcatctttctcat-tggataataattg---tcaaagcatttattggacagctcatccttttccagtcatctgcaatgctggctttgccataaatcaaatttcccagtaagtggtggtctgtttctgggttctctattttgttac--------attgttctgtcctctagcaatactgcactc--tcacgtactataacttgataataagtcttgatttctggatgagcatgtattcatac-atttttttttcaagactatctcaactatttggagttct i panTro4.chr3 I 5 C 0 s ponAbe2.chr9 92516755 413 + 135191526 actttggttgacatggttaaagta-ccttttcctcttccaagat-gtaagtttccctgcactttcttctaaaagtttttaaattttgttgttttatatttggtcgtacatctatctggatttgattctttgta-aaggtgtggtggagagatcatctttctcat-tggataataattg---tcaaggcatttattggacagctcacccttttccagtcatctgcaatgctggctttgccatgaatcaaatttcccagtaagtggtggtctatttctgggttctctattttgttac--------attgttctgtcctctagcaatactgcactc--tcacttactataacttgataataagtcttgatttctggatgagcatgtattcatactttttttttttcaagattatctcaactatttggagttct i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14297758 413 - 123690457 actttggttgacatggttaaagca-ccttttcctcttccaaggt-ataagtttccctacactttcttctaaaagtttttaaattttgttgttttatatttggtcttagatctacctggatttgattctttgta-aaggtgtggtggagagatcatctttctcat-tggataataattg---tcaaagcatttattggacagctcatccttttccagttatctgcaatgctggctttgccataaatcaaatttcccagtaagtggtggtctatttctgggttctctattttgttac--------atttttctgtcctctagcaatagtgcactc--tcacttactataacttgatagtaagtcttgatttctggatgagcatgtattcatacattttttttttcaagactatctcgactatttggagttct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103583066 409 + 192599291 actttggttgacatggtgaaagta-ccttttcctgttccaagatcataagtttccccacactttcttctaaaagtttttacattttgttgttttatatttggtcttacatctacctggatttgattctttgtg-aaggtgtagtggagagatcatctttctcat-tggataataattg---tcaaagcatttattggacagctcatccttttccagtcatctgcgatgctggctttgccataaatcaattttcccagtacgtggtgatctatttctgggttccttattttgttac--------atcgttctgtcctctagcaatactgcactc--tcacttac---aacttgataataagttttgatttctggatgagcatgtattcatac--attttttttcaagactatctcaactatttggagttct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103219598 409 - 192460366 actttggttgacatggtgaaagta-ccttttcctgttccaagatcataagtttccccacactttcttctaaaagtttttaaattttgttgttttatatttggtcttacatctacctggatttgattctttgtg-aaggtgtagtggagagatcatctttctcat-tggataataattg---tcaaagcatttattggacagctcatccttttccagtcatctgcgatgctggctttgccataaatcaattttcccagtacgtggtgatctatttctgggttccttattttgttac--------atcgttctgtcctctagcaatactgcactc--tcacttac---aacttgataataagttttgatttctggatgagcatgtattcatac--attttttttcaagactatctcaactatttggagttct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101021095 409 + 187378091 ACTTTGGTTGACATGGTGAAAGTA-CCTTTTCCTGTTCCAAGATCATAAGTTTCCCCAcactttcttctaaaagtttctaaattttgttgttttatatttggTCTTACATCTACCTGGATTTGATTCTTTGTG-AAGGTGTAGTGGAGAGATCATCTTTCTCAT-TGGATAATAATTG---TCAAAGCATTTATTGGACAGCTCATCCTTTTCCAGTCATCTGCAGTGCTGGCTTTGCCATAAATCAATTTTCCCAGTACGTGGTGATCTATTTCTGGGTTCCTTATTTTGTTAC--------ATCGTTCTGTCCTCTAGCAATACTGCACTC--TCACTTAC---AACTTGATAATAAGTTTTGACTTCTGGATGAGCATgtattcatac--attttttttcaagactATCTCAACTATTTGGAGTTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4888628 409 + 91754291 actttggttgacatggtgaaagta-ccttttcctgttccaagatcataagtttccccacactttcttctaaaagttttaaaattttgttgttttatatttggtcttacatctacctggatttgattctttgtg-aaggtgtagtggagagatcatctttctcat-tggataataattg---tcaaagcatttattggacagctcatccttttccagtcatctgcaatgctgactttgccataaatcaattttcccagtacgtggtgatctatttctgggttccttattttgttac--------atcattctgtcctctagcaatactgcactc--tcacttac---aacttgataataagttttgatttctggatgagcatgtattcatac--attttttttcaagactatctcaactatttggagttct i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92366775 401 - 98464013 actttggttaacatggttaaagta-gctcttcccgttctaaggtcataagtttccctatactttcttct-aaagtttttaaattttgttgttttatatttggtcttacttctacctggatttgagtctttgtg-aaggtgtgatggagagatcagctttctcat-tgg---ataattg---tcaagccatttattggacagcccatcctctgccaggcctctgcaatactggctttgccacagatcaaag----cagtgagtgggagtctatttctgggttctctattttgttac--------atttttctgtcctcaagcaatactgcaccc--tcacttactctaacttggtaat--gtcttgatttctgaataagcatatattcctac---atgtttttcaagactatctcaagtatttggtgtcct i calJac3.chr15 C 0 C 0 s canFam3.chr34 24749162 396 - 42124431 gctttgggtgacttggttaaaaaaggcttttcttgtttcaaggtcctaagtctccctatattttcctctaaaagtttaaaaattttgttgttttatatttggtccgacatccgt----------ttctttgtgaaaggagttgtagagagat---ctttcttatatggataacgattgtgctctcaccatttatt-----------------ccagtcatctgaaatgctagctttgtcataaaccaaatttcccaaaatgcgttagtctttttgggggctctctattttattcctttggtctatttgtctatttttgagcaataccaccctcttttaattactgtaacttgataataagtcttgatttctggatgagcatgtattctcac----attttttcaagaataccttgactatttggtgtcct i canFam3.chr34 C 0 I 233 a score=1019878.000000 s hg38.chr3_KI270781v1_alt 10117 329 + 113034 ctgcattttcatacata-ttttagaattagcttgtcagttctataaacattttgttgggattttgatttaaacaatgacttcctaggttaatttagggaaactgacatcttcatgatattgagtcttcc-------tattgataaccatggaatatgtct-catttatttaggtcttcttcaaaatccttcaataaagtttttca---------tatatatctaacatcttttgttacatttattcctagatacttgatTTCTATAAAATTTCAGCAGTCTCCAGGATTTACTTTCATAATTG-GAAAACAACACCTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAACCTTTTCA s panTro4.chr3 13760413 329 - 202329955 ctgcattttcatacaca-ttttagaattagcttgtcagttctataaacattttgttgggattttgatttaaacaatgacttcctaggttaatttagggaaactgacatcttcatgatattgagtcttcc-------tattgataaccatggaatatgtct-catttatttaggtcttcttcaaaatccttcaataaagtttttca---------tatatatctaacatcttttgttacatttattcctagatacttgatTTCTATAAAATTTCAGCAGTCTCCAGGATTTACTTTCATAATTG-GAAAACAACACCTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAACCTTTTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517168 384 + 135191526 ctgcattttcatacatg-ttttggaattagcttgtcagttctataaaaattttgttgggattttgatttaaacaatgacttcctaggttaatttagggaaactgacatcttcatgatattgagtcttcc-------tattgataaccatggaatatgtct-catttatttaggtcttcttcaaaatccttcagtaaagtttttca---------tatatatctaacatcttttgttacatttattcctagatacttgatTTCTATAAAATTTCAGCAGTCTCCAGGATTTACTTTCATAATTG-GAAAACAACACCTTTATGGTTTTAATtgtatgtatggtttgtatgtatgtaattgtatgtatgtaattgtatgtatgGTTTTAATTGTAAACCTTTTCA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14298171 330 - 123690457 ctgcatgttcgtacacatttttagaattagcttgtcggttctataaaaattttgttgggattttgatttaaacgatgacttcctaggttaatttagggaaactgacatcttcatgatattgagtcttcc-------tattgataaccatggaatatgtct-cttttatttagatcttcttcaaaatctgtcaataaagtttttcg---------tatatatctaacatcttttgttacatttattcctagatacttgatTTCTATAAAATTTCAGCAGTCTCCAGGATTTGCTTTCATAATTG-GAAAACAACACCTT-------------------------------------------------------TACATATGGTTTTAATTGTAAACCTTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103583475 328 + 192599291 ctg-attttcatataca-ttttagaattagcttgtcagttctacaaaaattttgttgggattttgatttaaacaatgacttcataggttaatttagggaaacctatg-------aatattgagtcttcc-------tattgataatcatggaatatgtct-catttatttaggtcttcttcaaaatccttcaataaagtttttcata--ttatatatatatctaatatcttttgttacatttatttctagatactttatTTCTGTAAAACTTCAGCAGTCTCCAGGATTGACTTTCATAATTG-GAAAAACACACCTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAACCTTTTCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103220007 327 - 192460366 ctg-attttcatataca-ttttagaattagcttgtcagttctacaaaaattttgttgggattttgatttaaacaatgacttcataggttaatttagggaaacctatg-------aatattgagtcttcc-------tattgataatcatggaatatgtct-catttatttaggtcttcttcaaaatccttcaataaagtttttcata---tatatatatatctaatatcttttgttacatttatttctagatactttatTTCTGTAAAACTTCAGCAGTCTCCAGGATTGACTTTCATAATTG-GAAAAACACACCTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAACCTTTTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101021504 325 + 187378091 ctg-attttcatatata-ttttagaattagcttgtcaGTTCTACAAAAATTTTGTTGGGATTTTGATTTAAACAATGACTTCATAGGTTAATTTAGGGAAACCTAtg-------aatattgagtcttcc-------tattgATAATCATGGAATATGtct-catttatttaggtcttcttcaAAATCCTTCAATAaagtttttca-----tatatatatatctaatatcttttgttacatttattcctagaTACTTTATTTCTGTAAAACTTCAGCAGTCTCCAGGATTGACTTtcataaatg-gaaaaacacaccTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAACCTTTTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4889037 323 + 91754291 ctg-attttcatataca-ttttagaattagcttgtcagttctacaaaaattttgttgggattttgatttaaacaatgacttcataggttaatttagggaaacctatg-------aatattgagtcttcc-------tattgataatcatggagtatgtct-catttatttaggtcttcttcgaaatccttcaataaagttttt-------catatatatatctaacatcttttgttacatttattcctagatactttatTTCTGTAAAACTTCAGCAGTCTCCAGGATTGACTTTCATAATTG-GAAAAACACACCTT-------------------------------------------------------TACGTATGGTTTTAATTGTAAGCCTTTAAA i chlSab2.chr15 C 0 I 4 s calJac3.chr15 92367176 330 - 98464013 ctgcattttcatacaca-ttttagaattagcttgtcaggtctacagaaattttgttgggattttgatttaaacggtgatttcataggttaatttagggaaaccgacatctttatgatattcagtcttct-------gattgataatcatgcaatatatct-catttatttagatcttcttcaaaatccttcagtaaagtttttca---------tatatatctaacatcttttgtcagatttattcctagatactttatTTCTAGAGAATTTCAGCAGTCTCTAGGATTCACTTTCATAATTGAAAAAAACACACCTT-------------------------------------------------------TACATATGGTTTTAATCGTAAACGTTTCCA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24749791 310 - 42124431 ttgcattttcatatatg-ttttagagttagcttct----tttagaaaatctttgttggggttttgatttaaataatgacttcacagcttaattttgggatattgacatctttatgatattggatcttttaaaaatatatatataagcattgcaaatatctccatttatttagg---tctacaaaatcttaccatgaagttttacatgttttccatatacatctaacaccctttattaggtttattactggatacttt--------------------------aagattcattttcataattg--aaaaAAACACCTT-------------------------------------------------------TACTTATCATTTTAACTGTGTATTTTTT-- i canFam3.chr34 I 233 C 0 a score=24647.000000 s hg38.chr3_KI270781v1_alt 10446 12 + 113034 GTTATAATCCTT s panTro4.chr3 13760742 12 - 202329955 GTTATAATCCTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517552 12 + 135191526 GTTATAATCCTT i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14298501 12 - 123690457 ATTATAATCCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103583803 12 + 192599291 GTTACAATCCTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103220334 12 - 192460366 GTTACAATCCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101021829 12 + 187378091 GTTACAATCCTT i papAnu2.chr2 C 0 C 0 s calJac3.chr15 92367506 12 - 98464013 ATTCCGATCTTT i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4889360 4 + 91754291 I e canFam3.chr34 24750101 0 - 42124431 C a score=368142.000000 s hg38.chr3_KI270781v1_alt 10458 122 + 113034 AAAAGTATTTAATGATTTGTATCAACATGCAGATTGGGGTCATGGGAAGATGG---CCTCTACAGTGAGTTTTCTCCAGTTTGACAAAAAGTATTAGAACCTTTGGAGAAAGGAAGAAAGCAGGA s panTro4.chr3 13760754 122 - 202329955 AAAAGTATTTAATGATTTGTATCAACATGCAGATTGGGGTCATGGGAAGATGG---CCTCTACAGTGAGTTTTCTCAAGTTTGACAAAAAGTATTAGAACCTTTGGAGAAAGGAAGAAGGCAGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517564 125 + 135191526 AAAAGTATTTAATGATTTGTGTCAACATGCAGATTGGGGTCATGGGAAGATGGCCTCCTCTATAGTGAGTTTTCTCAAGTTTGACAAAAAGTGTTAGAACCTTTGGAAAAAGGAAGAAGGCAGGA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14298513 125 - 123690457 AAAAGTATGTAATGATTTGTGTCAACATGCAGATTGGGGTCATGGGAAGATGGCCTCCTCTATAGTGAGTTTTCTCAAGTTTGACAAAAAGTGTTAGAACCTTTGGAGAAAGGAAGAAGGCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103583815 107 + 192599291 AAAAGTATTTAATGATTCATGTCAACACGCAGATTGGGGTCATGGGAAGATGGCTTCCTCTATA------------------GACAAAAAGTGTTAGAACCTTTGGAGAAAGGAAGAAGGCAGGA i rheMac3.chr2 C 0 I 308 s macFas5.chr2 103220346 107 - 192460366 AAAAGTATTTAATGATTCATGTCAACACGCAGATTGGGGTCATGGGAAGATGGCTTCCTCTATA------------------GACAAAAAGTGTTAGAACCTTTGGAGAAAGGAAGAAGGCAGGA i macFas5.chr2 C 0 I 324 s papAnu2.chr2 101021841 107 + 187378091 AAAAGTATTTAATGATTCATGTCAACACGCAGACTGGGGTCATGGGAAGATGGCTTCCTCTATA------------------GACAAAAAGTGTTAGAACCtttggagaaaggaagaaggcagga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4889364 107 + 91754291 AAAAGTATTTAATGATTCATGTCAACATGCAGATTGGGGTCATGGGAAGATGGCTTCCTCTATA------------------GACAAAAAGTGTTAGAACCTTTGGAGAAAGGAAGAAGGCAGGA i chlSab2.chr15 I 4 C 0 s calJac3.chr15 92367518 125 - 98464013 AAAAGCATTTAAGGATTCATGTCAACATGCAGATTAGGGTCATGGGAAGATGGCCTCCTCCATAGTGAGTTTTTCCAGGTTTGGCAAAAAGTGTTAGAACCTTTGGAGAAAGAAAGAAGGCAGGA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24750101 113 - 42124431 ---AGTATTGAAGAATTTA-AACGACTTGCAGATTGGGTTCATGGGAAAA--GTCTACTCTA------GTTTTCTCAGCTTTGATAAAAAGTGTTAGAACCTTTGGAGGAAGGAAAAAGGCAAAA i canFam3.chr34 C 0 C 0 a score=349418.000000 s hg38.chr3_KI270781v1_alt 10580 136 + 113034 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTATGTGTGTGTAATAGAGAGGCAAATAGAAACGGAGACAGAGAGACAGAGCGAGAATATAGGGCAATAGATTTA--TAAAAAATGGAAAATGACATGAGCACAGtg s panTro4.chr3 13760876 136 - 202329955 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTATGTGTGTGTAATAGAGAGGCAAATAGAAACGGACACAGAGAGACAGAGCGAGAATATAGGGCAATAGATTTA--TTAAAAATGGAAAATGACGTGAGCACAGtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517689 124 + 135191526 GAATTTTT----------------AATTACAAAGTTTATGTGTGTGTAATAGAGAGGCAAATAGAAACGGAGACAGAGAGACAGAGTGAGAATATAGGGCAACAGATTTA--TAAAAAATGGAAAATGACATGAGCACAGTG i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14298638 128 - 123690457 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTGAGTGTGTGTAATAGAGAGGCAAATAGAAAT--------CGAGACAGAGCCAGAATATAGGGCAATAGATTTA--TAAAAAATGGAAAAGGACATGAGCACAGtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103584230 134 + 192599291 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTATGTGTGTGTAATAGAGAGACAAATAGAAATGGAGGTAGAGAGACAG----AGAATATAGGGCAATAGATTTATTTAAAAAATGGACAATGACATGAGCACAGTG i rheMac3.chr2 I 308 I 181 s macFas5.chr2 103220777 134 - 192460366 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTATGTGTGTGTAATAGAGAGACAAATAGAAATGGAGGTAGAGAGACAG----AGAATATAGGGCAATAGATTTATTTAAAAAATGGACAATGACATgagcacagtg i macFas5.chr2 I 324 I 11 s papAnu2.chr2 101021948 134 + 187378091 gaattttt----ATGCACTTAAGAATTTACaaagtttatgtgtgtgtaatagagagacaaacagaaatggaggtagagagacag----agaatatagggcaatagatttattttaaaaatggacaatgaCATGAGCACAgtg i papAnu2.chr2 C 0 I 11 s chlSab2.chr15 4889471 134 + 91754291 GAATTTTT----ATGCACTTAAGAATTTACAAAGTTTATGTGTGTGTAatagagagacaaatagaaatggaggtagagagacag----agaatatagGGCAATAGGTTTATTTAAAAAATGGACAATGACATgagcacagtg i chlSab2.chr15 C 0 I 11 s calJac3.chr15 92367643 130 - 98464013 GAATTTTT----ATGCGCTTAAGAATTTACAAAGTTTGTGTGTGTGTAACAGAAA--CAAATGGAAACAGAGGCAGAGAGACAG----AGAATATAGAGCAATAGATTTA--TGAAAAATGGAAAATGACAcgagcacagtg i calJac3.chr15 C 0 I 11 s canFam3.chr34 24750214 91 - 42124431 -TATTTTTTTTAAAGCAATTGAAAATTGAAAAA-----------------------AAAAACAAAACTGTGGGTTGGTGGAAGGAGGGAGAGAGGTGTAGAAGAAATTTA--TAAAA------------------------- i canFam3.chr34 C 0 C 0 a score=31511.000000 s hg38.chr3_KI270781v1_alt 10716 18 + 113034 tagtcacgtta----gaaagct s panTro4.chr3 13761012 18 - 202329955 tagtcacgtta----gaaagct i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517813 18 + 135191526 TAGTCACGTTA----gaaagct i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14298766 18 - 123690457 tagtcacgtta----gaaaact i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103220922 22 - 192460366 tagtcccattagtagggaggct i macFas5.chr2 I 11 C 0 s papAnu2.chr2 101022093 22 + 187378091 tagtcccattAGTAGGGAGGCT i papAnu2.chr2 I 11 C 0 s chlSab2.chr15 4889616 22 + 91754291 tagtcccattagtagggaggct i chlSab2.chr15 I 11 C 0 s calJac3.chr15 92367784 22 - 98464013 tagtcccattagtagggaggct i calJac3.chr15 I 11 C 0 e rheMac3.chr2 103584364 181 + 192599291 I e canFam3.chr34 24750305 0 - 42124431 C a score=3494375.000000 s hg38.chr3_KI270781v1_alt 10734 1104 + 113034 gaggcaggaggatcacttaagcctaggagtttgaggctgtagtgcaccatgatggcgcctgtgaatagccactgcacttcagcctgggtaacacagcaagatccccatctctt-----------a-aaaaaa------aagtacaaagcgtaca-------aatggaactcagctgcccacctgcccacctcaggttatcggctcccccaccagc--------aggcttccgctgcttacaggttcttgtgtagccttccagaaatattgtagtctcctacaattatgcatatgatt-atattctctccaaatctatcccatcca--ttttttt-gacaccaattaaagtataaaataca-----gttcagcactttgcttttccctttgtaatcttcccatgttagtgcataaagtttagctcattttaaaaataactacac---agttcattttccagttcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcaatcatcattctta---tacatacagctttacaacaatgggagcatccctataggaatgggcagagaataaatgcatgtgtaattttgatagact--gccaaatcgctctct-aaaaagattgcaacaatttacaattccaacaaacgcatgagaattgcctatctgcattgccctcattcacgctaacactttatattatcaaattttaaaatgaagaa----cttattttttcttt-aatatgcattttcttaattatggttgaaatagaacccatctttttgtatgtctttaagccatttatacatcttttcttgctgtatgctgattttcttttgggctgtatttattc---------ctatgttga-tagtaagagctaactatatattgaggaaattaGCTATTTATATAACATATGAGTTGCCG------TATTTTTTCT--AACTTTTCATTT-TTTTTTACT-----TTTTTTGTT----------TTTTCCATACAGAATTTTGCTTTAA------TGTATTTGCACATGTTC------TATTTTTCCTTTTTTGTCTTCTGAGTTTTGTCCTT--TACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTAAAATTGTTTCATCTTTTATTATAGTACTTTACATGCATTTTTATTGTGAAATGTACAT-----TTTTTTAAAGTTAGC s panTro4.chr3 13761030 1108 - 202329955 gaggcaggaggatcacttaagcctaggagtttgaggctgtagtgcaccatgatggcgcctgtgaatagccactgcacttcagcctgggtaacgcagcaagatccccgtctctt-----------a-aaaaaa------aaGTACAAAGTGTGCA-------AATGGAACTCAGCTGCCCACCTGCCCACCTCAGGTTATcggctcccccaccagc--------aggcttccgctgcttacaggttcttgtgtagcctttcagaaatattgtagtctcctacaattatgcatatgatt-atattctctccaaatctatcccatcca--tttttt--gacaccaatgaaagtataaaatacat-acagttcagcactttgcttttcccattgtaatcttcccatgttagtgcataaagtttagctcattttaaaaataactacac---agttcattttccagttcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcaataatcattctta---cacatacagctttacaacaatgggagcatccctacaggaatgggcagagaataaatgcatgtgtaattttgatacact--gccaaactgctctct-aaaaagattgcaacaatttacaattccaaaaaacgcatgagaattgcctgtctgcattgccctcattcacgctaacactttatattatcaaattttaaaatgaagaa----cttattttttcttt-aatatgcatattcttaattatggttgaaatagaatccatctttttgtatgtctttaagccatttatacatcttttcttgctgtatgctgattttcttttgggctgtatttattc---------ctatgttga-tagtaagagctaactatatattgaggaaattagCTATTTATATAACATATGAGTTGCCG------TATTTTTTCT--AACTTTTCATTTATTTTTTACT-----TTTTTTGTT----------TTTTCCATACAGAATTTTGCTTTAA------TGTATTTGCACATGTTC------TATTTTTCCTTTTTTGTCTTCTGAGTTTTGTACTT--TACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTAAACTTGTTTCATCTTTTATTATAGTACTTTACATGCATTTTTATTGTGAAATGTACAT-----TTTTTTAAAGTTAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92517831 1108 + 135191526 gaggcaggaggatcacttaagcctaggagtttgaggctgtagtgcaccgtgatggtgcctgtgaatagccactgcactccagcctgggtaacatagcaagat-cccgtctctt---------aaa-aaaaaa------aaGTACAAAGCGTACA-------AATGGAACTCAGCTGCCCACCTGCCCACCTCAGGTTATCGGCTTCCCCACCAGC--------AGGCTTCCGCTGCTTATAGGTTCTTGTGTAGCCTTCCAGAAATATTGTAGTCTCCTACAATTATGCATATGATT-ATATTTTCTCCAAATCTATCCCATCCA--TTTTTTT-GACACCAATAAAAGTATAAAATACAT-ACAGTTCAGCACTTTGCTTTTCCCATTGTAATCTTTCCATGTTAGTGCATAAAGTTTAGCTCATTTTAAAAATAAGTACAC---AGTTCATTTTCTAGTTCC---------C----------TGTTAAC-tgtgtccagtcttttgcaataacaaacaacactgcaatcatcattctta---cacatacagctttacaacaatgggagcatccctataggaatgggcagagaataaatgcatgtgtaattttgatagact--gccaaattgctctct-aaaaagattgcaacaatttacaattccaacaaatgcataagaattgcctatctgcattgccctcattcacgctaacactttatattatcaaattttaaaaataaaaa----cttatttttgcctt-aatatgcattgtcttaattatggttgaaatagaacccatctttttgtatgtctttaagccatttatacatcttttCTTGCTCTATGGTGATTTTCTTTTGGGCTCGATTTATTC---------CTATGTTGA-TAGTAGGAGCTAACTATATATTGAGGAAATTAGCTATTTATATAACATATGAGTTGCCA------TATTTTTTCT--AACTTTTCATTTATTTTTTACT-----TTTTTTG-T----------TTTTCCATACAGAATTTTGCTTTAA------TGTATTTGCACATGTTC------TATTTTTTCTTTTTTGTCTTCTGAGTTTTGTCCTT--TACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTAAAATTGTTTCATCTTTTATTATAGTACTTTACATGCATTTTTATTGTGAAATGTACAT-----TTTTTTAAAGTTAGC i ponAbe2.chr9 C 0 I 10 s nomLeu3.chr11 14298784 1104 - 123690457 gaggcaggaggatcactgaagcctaggagtttgaggctgtagtgcaccatgatggcgcctgcgaatagccactgcactccagcctgggtaacatagcaagat-cccgtctctt-----------ataaaaaa------aggtacaaagcataca-------aatggaactcagctgcccacctgcccacctcaggttatcggcttccccaccagc--------aggtttccgctgcttacaggttcttgtgtagccttccagaaatattgtagtctcctacaattatgcgtatgatt-atattctctccaaatctatcccatcca--tttttttcgacaccaatgaaagtataaaatacat-acagttcagcactttgcttttcccattgtaatctttccatgtgagtgcataaagTTTAGCTCATTTAAAAAA----TAcac---agttcattttccagttcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcagtcatcactctta---cacatacagctttacaacaatgggagcatccctataagaatgggcagagaataaatgcatgtgtaattttgatagact--gccaaattgctctct-aaaaagattgcaacaacttacaattccaacaaacgcatgagaattgcctatctgcattg-cctcattcatgctaacactttatattatcaaattttaaaatgaaaaa----cttatttttgcttt-actatgcattttcttaattatggttgaaatagaacccatcttttggtttgtctttaagccatttatacatcttttcttgctctatgctgattttcttttgggctggatttattc---------ctatgttga-tagtaagagctaactatatattgaggaaattagCTATTTATATAACATATGAGTTGCCA------TATTTTTTCT--AACTTTTCATTTATTTTTTACT-----TTTTTTGTT----------TTTTCCATACAGAATTTTGCTTTAA------TGTATTTGCACATTTTC------TATTTTTCCTTTTTTGTCCTCTGAGTTTTGTCCTT--TACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTAAAATTGTTTCATCTTTTATTATAATACTTTACATGCATTTTTATCGTGAAATGTAC-T-----TTTCTTAAAGTTAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103584545 1129 + 192599291 gaggtaggaggatcacttaagcccaggactttgaggctgtattgcaccatcatggcacctgtgaatagctactgcactccagcctgggtaacacagcaagac-cccgtctctt-aaaaaaaaaaa-aagaaa------aagtacaaagcgtaca-------aatggaactcagctgcccacctgcccacctcaggttctcggcttccccaccagc--------aggcttctgctgcttacaggttcttgtgtagccttccagaaatattg--gtctcctacaattatgcatatgatt-atattctctccaaatctatcccatcca--ttttttttgacaccaatgaaagtataaaatacat-acagctcggcactttgcttttcccattgtaatctttccttgttagtgcataaagtctagctcatttaaaaaataactacac---agttcactttccaattcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcaatcatcattctta---cacatacagctttacaacaatgggagcatcgctataggaatgggcagagaataaatgcatgtgtgatttttatagact--gccaaattgctctct-aaaaagattgcaacaatttacagttccaacaaacgcatgagaattgcctatctgcattgccctcattcacgctaacactttatattatcaaattttaaaatgaaaaa----tttatttttgcttt-aatatgcattttcttaattatggatgaaatagaacccatctttttatatgtctttaagtcatttatacatcttttcttgctctatgctgattttcttttgggctggatttattc---------ctatgttga-tagtaagaactcactatatattGAggaaattagctatttatataacgtataagttgcca------tattttttct--aacttttcatttattttttacgtg---ttttttgtttgtttgtttgttttctttacagaattttgcttgaa------tgtatttgcacatgttc------tatttttcctcttttggcttctgagttttgtcctt--tacttagaaagcctttccccactccaagagttctatttttaaaattgtttaatcttttattgtAGTACTTTACATGCATTTTTATGGTGAAATGTACAT-----TTTTTTAAAGTTGGC i rheMac3.chr2 I 181 C 0 s macFas5.chr2 103220944 1136 - 192460366 gcggtaggaggatcacttaagcccaggactttgaggctgtattgcaccatcatggcacctgtgaatagctactgcactccagcctgggtaacacagcaagac-cccgtctcttaaaaaaaaaaaa-aaaaaa------aagaaaaaAGCGTACA-------AATGGAACTCAGCTGCCCAcctgcccacctcaggttctcggcttccccaccagc--------aggcttctgctgcttacaggctcttgtgtagccttccagaaatattg--gtctcctacaattatgcatatgatt-atattctctccaaatctatcccatcca--ttttttttgacaccaatgaaagtataaaatacat-acagctcggcactttgcttttcccattgtaatctttccttgttagtgcataaagtctagctcatttaaaaaataactacac---agttcattttccaattcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcaatcatcattctta---cacatacagctttacaacaatgggagcatcgctataggaatgggcagagaataaatgcatgtgtaatttttatagact--gccaaattgctctct-aaaaagattgcaacaatttacagttccaacaaacgcatgagaattgcctatctgcattgccctcattcacgctaacactttatattatcaaattttaaaatgaaaaa----tttatttttgcttt-aatatgcattttcttaattatggatgaaatagaacccatctttttatatgtctttaagtcatttatacatcttttcttgctctatgctgattttcttttgggctggatttattc---------ctatgttga-tagtaagaactcactatatattgaggaaattagCTATTTATATAACGTATAAGTTGCCA------TATTTTTTCT--AACTTTTCAtttattttttacgtg---ttttttgtttgtttgtttgtttTCCTTACAGAATTTTGCTTTAATGTATTTGTATTTGCACATGTTC------TATTTTTCCTCTTTTGGCTTCTGAGTTTTGTCCTT--TACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTAAAATTGTTTAATCTTTTATTGTAGTACTTTACATGCATTTTTATGGTGAAATGTACAT-----TTTTTTAAAGCTAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101022115 1124 + 187378091 gcggtaggaggatcacttaagcccaggactttgaggctgtaTTGCACCATCATGgcacctgtgaatagctactgcactccagcctgggtaacacagcaagac-cccgtctctt---------aaa-aaaaaa------aagtacaaagcgTACA-------AATGGAACTCagctgcccacctgcccacctcagGTTCTCGGCTTCCCCACCAGC--------AGGCTTCTGCTGCTTACAGGTTCTTGTGTAGCCTTCCAGAAATATTG--GTCTCCTACAATTATGCATATGATT-ATATTCTCTCCAAATCTAtcccatccattttttttttgacaccaatgaaagtataaaatacat-acagcTCGGCACTTTGCTTTTCCCATTGTAATCTTTCCTTGTTAGTGCATAAAGTctagctcatttaaaaaataactacac---AGTTCATTTTCCAATTCC---------C----------TGTTAACTTGTGTCCAGTCTTTTGCAATAACAAACAACACTGCAATCATCATTCTTA---CACATACAGCTTTACAACAATGGGAGCATCGCTATAGGAATGGGCAGAGAATAAATGCATGTGTAATTTTTATAGACt--gccaaattgctctcc-aaaaaGATTGCAACAATTTACAGTTCCAACAAACGCATGAGAATTGCCTATCTGCATTGCCCTCATTCACGCTAACACtttatattatcaaattttaaaatgaaaaa----tttatttttgcttt-aatatgcattttcttaattatGGATGAAATAGAACCCATCTTTTTATATGTCTTTAAGTCATTTATACATCTTTTCTTGCTCTATGCTGATTTTCTTTTGGGCTGGATTTATTC---------CTATGTTGA-TAGTAAGAACTCACTATATATTGAGGAAATTAGctatttatataatgtataagtTGCca------tattttttct--aac-tttcattt-ttttttacgtgtttttttttgtttgtttgtttgttttccttacaGAATTTTGCTTTAA------TGTATTTGCACATgttc------tatttttcctcttttggctTCTGAGTTTTGTCCTT--TACTTAGAAAGGCTTTCCCCACTCcaagagttctatttttaaaattgtttaatctTTTATTGTAGTACTTTACATGCATTTTTATGgtgaaatgtacat-----ttttttaaaactagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4889638 1125 + 91754291 gcggtaggaggatcacttaagcccaggactttgaggctgtattgcactatcatggcacctgtgaatagctactgcactccagcctgggtaacacagcaagac-cccgtctctt----------aa-aaaaaa------aagtacaaagcgtaca-------aatggaactcagctgcccacctgcccacctcaggttctcggcttccccaccagc--------aggcttctgctgcttacaggttctggtgtagccttccagagatattgtagtctcctacaattatgcatatgatt-atattctctccaaatctattccatccatttttttttttacatcaatgaaagtataaaatacat-atagctcggcactttgcttttcccattgtaatctttccttgttagtgcataaagtctagctcatttaaaaaataa-tacac---agttcattttccaattcc---------c----------tgttaacttgtgtccagtcttttgcaataacaaacaacactgcaatcatcattctta---cacatacagctttacaacaatgggagcatcgctataggaatgggcagagaataaatgcatgtgtaattttgatagact--gccaaattgctctct-aaaaagattgcaacaatttacaattccaacaaacgcatgagaattgcctatctgcattgccctcattcacgctaacactttatattatcaaattttaaaatgaaaaa----tttatttttgcttt-aatatgcattttcttaattatggatgaaatagaacccatctttttatatgtctttaagtcatttatacatcttttcttgctctatgctgattttcttttgggctggatttattc---------ctatgttga-tagtaagaactcactatatattgaggaaattagCTATTTATATAACGTATAAGTTGCCA------TATGTTTTCT--AACTTTTCAtttattttttacgtg---ttttttgtttgtttgtttgtttTCCTTACAGAATTTTGCTTTCA------TGTATTTGCACATGTTC------TATTTTTCCTCTTTTGGCTTCTGAGTTTTGTCCTTTATACTTAGAAAGGCTTTCCCCACTCCAAGAGTTCTATTTTTCAAATTGTTTAATCTTTTATTGTAGTACTTTACATGCATTTTTATGGTGAAATGTACAT-----TTTTTTAAAGCTAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92367806 1132 - 98464013 gaggcaggaggatcaggtaagcccaggagtttga-gctgtagtgcaccatgatggtacctgtgaatagccactacactccagcctgggtaacatagcaagac-cctgtctctt---------aaa-aaaaaaaTTAAGAAGTCCAAAGCGTATA-------AATGGAACTCAGCTGCCCACCTGCCCACTTCAGGTTCTCAGCTTCCCCACCAGC--------AGGCTTCTGCTGCTTACAGGGTCTCGTGTAACCTTTCAGCAATATTGTAGTCTCCTATAGTTATGCATATGATT-ATATTCTCTCCAAATCTATCCCATCCA--TTTTTTTTGACCCCAATGAAAGTATAAAATACAT-ACACTTTGGCACTTCGCTTTTCCCATTGTAATCTTT-CATGTTAGTGCATAAAGTCTAGCGCATTTAACAAATAACTAcac---aattcattttccagtttc---------cagttgaggggtattaagttgtgtccagtcttttgcagtaacaaacagctctgcaatcatcattctta---cacatacagcttcacagcaatggtaacatccctgtggg---gggcagagaat-aatgcacgtgtaattttgatagact--gccaaattgctctct-aaaaatatgtcaacaatttacaattccaacgaatgcatgagaactgcctatctgcattgccctcattcacaccaacactttatattatccaatttttaaatgaaaaa----tttatttttgcttt-gctatgcattttcttaattatggatgaaatagaactgatgtttttgtgtatctttgagccatttatgtacctcttcttCCTCGATGCTGATTTACTTTGGGGCTGGATTTATTCTtatattgtttatgttga-tagtaagtgctcactatatattgacgaaattagctatctatatagcatatcagttgcca------tattttttct--aacttttcatttattttttac------ttttttgtt-------------tccatacagaattttgctctaa------tatatttgtacatgttctttttttttttttccttttttggcttctgagttttattctt--tacttagaaagtctttccccactccaagagttctatttttaaaattgttttgtcttttattatagtactttgcatgcatttttatcgtgaaatgtacat-----tttttaaaagttagc i calJac3.chr15 C 0 C 0 s canFam3.chr34 24750305 967 - 42124431 -----------------------------------------------------------------------------------------------------------------------------TGCCAAA------AAGTATAAAGTGTAAAACAATGCAATGAAATTCAATGGCC-------------CAGGTTTTCAGGCT-CCCACTAGCTTTTTCCAAAACATCTGCTGCTTAGAAGTCCTTG--------------AATATGTTAGTGTCCTACAATTATTTATATGGTTGATGCTTTCTCAAAATCAAtcccatcca--ttttt---gacacaaatggaagcataaaatatacaacagttca-------gcttttttcattgaacaatttatatgtaatctt------tctagctcattatgcaaatagctaaacagtagttcattttcagtttcctattggtaac----------cattaagttgtttccaggcttcctcaataacaa----tatggcaatcaatagccttaaagtatatatgactgtacacatacagaaatat-------aagatggacagacag-aaatgcatatgtaattttgatagacttcgccaaattgctttctaaaaaagactgcaacaatttacaattccaacagatgcaagagaa-tgcctgtttgcattgccttcattcacgctcacactttatatgatcaaatttcttaatgaataaacatctcatttttattttcaattggcatttccttatttatgggc-aaatgga----gtgtctttccttgtcc---aaccatttgtatatctttttctgccctatgtccatttttct---------atttttgc---------ctttattgatttgtaagcatttatgatataatagggaaattagccatttatctgacatataagttgcagttattttATTATTTCTCAAACTTTTCATGTATTTTTTA-------TTTTGTATTTGTTTTTAT-TTCCCCACTCAGAATTTC-TTTTAA------TG-------------CC------CATTTTTTTTCCTTTGGTTTCTGAGTTTTGCCCCT--TACCTAGAAAGACTTTCCCCATTCCAAGATTTTTATTTTTTAA-TTCTTTCATCTTCTATTCTAGTACTTCACATGCTTTTTCATAGTGAAATATAcatatatattgtttaa--ttagc i canFam3.chr34 C 0 C 0 a score=157771.000000 s hg38.chr3_KI270781v1_alt 11838 58 + 113034 ATACCAGTTCTATAAAAATCTTTGTTGGGAATTTTGATTAAAACAGTAACTTCATAGA s panTro4.chr3 13762138 58 - 202329955 ATACCAGTTCTATAAAAATCTTTGTTGGGAATTTTGATTAAAACAGTAACTTCATAGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14299888 58 - 123690457 CTACCAGTTCTATAAAAATCTTTGTTGGAAATTTCGACTAAAACAGTAACTTCATAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103585674 58 + 192599291 ATACCAGCTCTATAAAAATCTTTGATGGGAATTTTCATTAAAACAGTAACTTTGTAGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103222080 58 - 192460366 ATACCAGCTCTATAAAAATCTTTGATGGGAATTTTGATTAAAACAGTAACTTTGTAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101023239 58 + 187378091 atACCAGCTCTATAAAAATCTTTGATGGGAATTTTGATTAAAACAGTAACTTTGTAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4890763 58 + 91754291 ATACCAGCTCTATAAAAATCTTTGATGGGAATTTTGATTAAAACAGTAACTTTGTAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92368938 57 - 98464013 atatcagttctataaaaatctttgttgggaattt-ggttaaaacaataacttcataga i calJac3.chr15 C 0 C 0 s canFam3.chr34 24751272 57 - 42124431 ttgtcaattccatacaaatctttgttggg-attttgattaaaacaataacttcataga i canFam3.chr34 C 0 I 3741 e ponAbe2.chr9 92518939 10 + 135191526 I a score=1183138.000000 s hg38.chr3_KI270781v1_alt 11896 585 + 113034 ACTTGAGGATAAGCGGTaaaaaaataataataataaaaaagaaaaagaaaaaaaaaa-CCCAGTAACTTCAGggccaggcacggtagctcacacctataatcccagcactttgggaggccgaggcagaaggatcatttgaggccaggagttcaaggccagtctgtgcaacatagcaaggccccatctctacaaaaattaaaaaaaaaaaaaaacttagcctggcttggtggcgttcacctgtagtcccagctgctccagaggctgaggtgggagggtggcttgagcccaggagtttaaggctgcagtgagccatgctcacgccactgcactctagtctgggtgacagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-CCAGTAACTTCatagactaatttggggaagtagacaactttatgatattgagtcttcctattgataaacatggtatatatctctatataGAAAACTAGGATTTTatacatacgcatatatatata--cacacatatatat----ggcttatgataaatataaagtgaacagttgtgtaactacaacccaggtagagaaataaaatatt s panTro4.chr3 13762196 586 - 202329955 ACTTGAGGATAAGCGGTaaaaaaataataataataaaaaagaaaaagaaaaaaaaaaaCCCAGTAACTTCAGggccaggcacggtagctcacacctataatcccagcactttgggaggccgaggcagaaggatcatttgaggccaggagttcaaggccagtctgtgcagcatagcaaggccccatctctacaaaaag-aaaaaaaaaaaaaaacttagcgtggcttggtggcgttcacctgtagtcc-agctgctccagaggctgaggtgggagggtggcttgagcccaggagtttaaggctgcagtgagccatgctcacgccactgcactctagtctgggtgacagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-CcagtaacttcatagactaatttggggaagttgacaactttatgatattgagtctttctattgataaacatggtatatatctctatataGAAAACTAGGATTTTatacatacgcatatatatatatacacacatatatat----ggcttatgataaatataaagtgaacacctgtgtaactacaacccaggtagagaaataaaatatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14299946 554 - 123690457 ACTTGAGGATAAGTGGTaaaaaa--aaaaattataaaaaagaaaaaaaaaaaa-----CCCAGTAACTTCAGggccaggcacagtggctcacacctataatcccagcacttcaggaggccaaggcagaaggatcatttgaggccaggagttcaaagccagtctgtgcaacatagcaaggccccatctctacaaaaat------aaaaaaaaaacttagcctggcttggtggcgttcacctgtagtcccggctgctccagaggctgaggtgggaggatggcttgagcccaggagtttaaggctgcagtgagccatgatcacgccaccgcactctagtctgtgtgacagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-CCAGTAACTTCATAGACTAATTTGGGGAAGTAGGCAACTTTA-------------------TGATAAACATGGTATATATCTCCATATAGAAAACCAGGATTTTatacatacacatatatatata--cacacatatatat----ggcttatgataaatataaagtgaacacctgtgtaactacaacccaggtagagaaataaaatatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103585732 548 + 192599291 ACTTGAGGATAAGTGGTTAAA----AACAATTATAAAAAAGAAAAAAAAA-----AA-CCCAGTAACTTCAGggccaggcacagtggctcacacctataatcccagcactttgg------------------------gaggccaggagttcaaggccagtctgtgaaacatagcgaggctccagctctacaaaaat-------ttttaaaaacttagcctggctgggtggcgttcacctgtagtcccagctgctccagaggctgaggtgggaggatgacttgagcccaggagtttaaggctgcagtgagccatgatcacaccactgtactccagtctgggagatagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-Ccagtaacttcatagactaatttgggaaagtagacaacttta---tgttgagtcttcctattgataaacatggtgtgtatctccatataGAAAATGGGGattttatacatacacatatatatacacacacacacacacacatatggcttatgataaatataaagtgaacacctgtgtaactacaacccaggtagagaaatagaatatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103222138 544 - 192460366 ACTTGAGGATAAGTGGTTaaa----aacaattataaaaaagaaaaaaaaa-----aa-CCCAGTAACTTCAGggccaggcacagtggctcacacctataatcccagcactttgg------------------------gaggccaggagttcaaggccagtctgtgcaacatagcgaggccccatctctacaaaaat-------tttaaaaaacttagcctggctgggtggcgttcacctgtagtcccagctgctccagaggctgaggtgggaggatgacttgagcccaggagtttaaggctgcagtgagccatgatcacaccactgtactccagtctgggagatagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-Ccagtaacttcatagactaatttgggaaagtagacaacttta---tgttgagtcttcctattgataaacatggtatgtatctccatataGAAAATGGGGATTTTatacatacacatatatatacacacacacacacacac----ggcttatgataaatataaagtgaacacctgtgtaactacaacccaggtagagaaatagaatatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101023297 548 + 187378091 ACTTGAGGATAAGTggttaaa----aacaattataaaaaagaaaaaaaaaaaa-caa-cccagtaACTTCaggtccaggcacggtggctcacacctataatcccagcactttgg------------------------gaggccaggagttcaaggccagtctgtgcaacatagcgaggccccatctctacaaaaat-------tttaaaaaacttagccTGGCTGGGTGgcgttcacctgtagtcccagctgctccagaggctgaggtgggaggatgacttgagcccaggagtttaaggctgcagtgagccgtgatcacaccactgcactccagtctgggtgatagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-ccagtAACTTCATAGACTAATTTGGGAAGGTAGACAACTTTA---TGTTGAGTCTTCCTATTGATAAACATGGTATGTATCTCCATATAGAAAATGGGgattttatacatacacatatatatacacacacacatatatat----ggcttATGATAAATATAAAGTGAACACCTATGTAACTACAACCCAGGTAGAGAAATAGAATATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4890821 548 + 91754291 ACTTGAGGATAAGTGGTTaaa----aacaattataaaaaagaaaaaaataata-aaa-CCCAGTAACTTCAGggccaggcacggtggctcacacctataatcccagcactttgg------------------------gaggccaggagttcaaggccagtctgtgcaacatagcgaggccccatctctacaaaaat-------tttaaaaaacttagcctggctgggtggcgttcacctgtagtcccagctgctccagaggctgaggtaggaggatgacttgagcccaggagtttaaggctgcagtgagccatgatcacaccactgcactccagtctgggagatagggtgagatgctatctcaaaaacaaacaaaccaaaaaa-CCAGTACCTTCatagactaatttgggaaagtagacaacttta---tgttgagtcttcctattgataaacatggtatgtatctccatataGAAAATGGGGATTTTacacatacacatatatatacgcacacacatatatat----ggcttatgataaatataaagtgaacacctgtgtaactacaacccaggtagagaaatagaatatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92368995 554 - 98464013 acttgaggataagtggtaaaaaaa-aaaaattataaaaaagaaaaaaata------a-CCCAGTAACTTCAGggccaggcttggtggctcacgcctgtaatcccagcactttgagaaggtgaggtaggaggatcatttgaggccaggagttcaagaccagcccatgcaacatagcaaggccccatctctacaagaaa------atttaaaaaacttagcctggcttggtggccttcacctgtagtcccagctgctcaggaggctgaggtgggaggatggcttgagcccaggc-tcacaggctgcagtgagctatgatcgcaccactgcactccagtctgggtaacagagtgcgagcctatctcaaaaacaaacaaacaaaaaaaCCCAGTaatttcataaactaatttggggagggagacaactttatcatattgaggcatcctattgataaacatggtatatatctccatAAAGAAAACTGGGAGTTTATacatacatatatat------------------------ggcttatggtaagtataaagtcaacacctgtgtaactataatccaggtagagaaagaaaatatt i calJac3.chr15 C 0 C 0 e ponAbe2.chr9 92518939 10 + 135191526 I e canFam3.chr34 24751329 3741 - 42124431 I a score=1746.000000 s hg38.chr3_KI270781v1_alt 12481 3 + 113034 gtc s panTro4.chr3 13762782 3 - 202329955 gtc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14300500 3 - 123690457 gtc i nomLeu3.chr11 C 0 C 0 s calJac3.chr15 92369549 3 - 98464013 gtc i calJac3.chr15 C 0 I 728 e ponAbe2.chr9 92518939 10 + 135191526 I e chlSab2.chr15 4891369 0 + 91754291 C e papAnu2.chr2 101023845 0 + 187378091 C e macFas5.chr2 103222682 0 - 192460366 C e rheMac3.chr2 103586280 0 + 192599291 C e canFam3.chr34 24751329 3741 - 42124431 I a score=3300.000000 s hg38.chr3_KI270781v1_alt 12484 11 + 113034 gggccgggcgc s panTro4.chr3 13762785 11 - 202329955 gggccgggcgc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14300503 11 - 123690457 gggccgggcgc i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr9 92518939 10 + 135191526 I e chlSab2.chr15 4891369 0 + 91754291 C e papAnu2.chr2 101023845 0 + 187378091 C e macFas5.chr2 103222682 0 - 192460366 C e rheMac3.chr2 103586280 0 + 192599291 C e canFam3.chr34 24751329 3741 - 42124431 I e calJac3.chr15 92369552 728 - 98464013 I a score=142184.000000 s hg38.chr3_KI270781v1_alt 12495 296 + 113034 ggtggctcacgcctgtaatcccagcattttgggaggccaaggcaggcggattgcgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaaattagccgggcatggtggcgggcgcctgtagtctcagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggtggaggttgtggtgagccgagatcgcgccactgaactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaa--------aaccattgtc s panTro4.chr3 13762796 304 - 202329955 ggtggctcacgcctgtaatcccagccttttgggaggccgaggcaggcggattacgaggtcaggagatcgagaccatcctggctaacacggtaaaaccccgtctctactaaaaatacaaaaaaaattagctgggcatggtggcgggcacctgtagtctcagctactcaggaggctgaggcaggagaatggtgtgaacccaggagatggaggttgtggtgagccgagatcgtgccactgaactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaacaaaaaaaaaacattatc i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92518949 285 + 135191526 ggtggctcatgcctgtaatcccagcattttgggaggccgaggcgggcggatcacgaggtcaggaggtggagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaaaaaaaattagccaggca---tggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactctgtctcaaaaa----------------aaacattgtc i ponAbe2.chr9 I 10 C 0 s nomLeu3.chr11 14300514 304 - 123690457 ggtggctcacgcctgtaatcccagccctttggaaggccgaggcgggcggattacgagttcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaaataaaattaccccggcatgatggcgggcgcctgtagtcccagctactcgggaggctgaggcgggagaatggcgtgaacctgggaagcggagctggcagtgagccgagatcacgccactgcactacagcctgggcgacagagcgagactccatctcaaaaaaaaaacaaaaaacaaaaaacattgtc i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4891369 0 + 91754291 C e papAnu2.chr2 101023845 0 + 187378091 C e macFas5.chr2 103222682 0 - 192460366 C e rheMac3.chr2 103586280 0 + 192599291 C e canFam3.chr34 24751329 3741 - 42124431 I e calJac3.chr15 92369552 728 - 98464013 I a score=2378788.000000 s hg38.chr3_KI270781v1_alt 12791 1056 + 113034 aacaccttagaactgctcctcctg-ctccattgtgccccttatagacaataatct---ccctccccaccagggagggatttctaatttctgaaatgcctgatttctgtaataaacagtatatgtatatctctaaacaatatat-----------------cttag-------tttaaaaaaatatattattcaaatagaatgaggctgggtgtggtggctcacgtctgtaatcccagcactttgggaggccgaggccggcagatcacctgaggtcaggagttagagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatta------------------------------gccaggcatggtggtgcacacttgtagtcccagctgcttgggaggctgaggcccgagaatagcttgaacccaggaggcagagacttcagtgagctaagatcgcaccactgcactccagcctgggcaacagaacgagatccgtctcaaa-aaaaaaaaaaaaaaaaa--gaatgagatgatgctgtatttgttttaatcctttgctcctttctctctgtattatgtttgtgggattatttcctgttgttacacgtggcaataatAGTGAGCTACAAATCAGTGCTATAtttggtatatcaaccttggagccagcattcttgttaaatccattcattaaattaaacatattatctttagattgttctagaat--------gtttacatacacagtcacactgcctacagctaatgatagttttatttccttcttttaaataatacaatttttattttattttatatatatat-----------tttttgagatggagtctctctctgtcccccaggctggagtgcagtggtgcaatctcagcttactgcaagctccgcctccagggttcacgccattcttctgcctcagcctgtggagtagctgggactacaggcgcctgccaccatgcctggctacttttttatatttttagtggagacagggtttcaccgtgttggccaggatggtctcaatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgggattacagatgtgagccaccgtgcccggcc s panTro4.chr3 13763100 1077 - 202329955 aataccttagaactgctcctcctg-ccccattgtgccccttatagataataatcttctccctccccaccaggaagggatttctaatttctgaaatacctgatttctgtaataaacagtatatgtatatccctaaacaatatatatccctaaacaatatatcttag-------tttaaaaaaatatattattcaaatagaatgaggctgggtgtggtggctcacgtctgtaatcccagcactttgggaggccggggccggcagatcacctgaggtcaggagttagagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatta------------------------------gccaggcatggtggtgcacacttgtagttccagctgcttgggaggctgaggtccgagaatcgcttgaacccaggaggcagagacttcagtgagctaagatcgcaccactgcactccagcctgggcaacagaacgagatccgtctcaaa-aaaaaaaaaaaaaaaaaaagaatgagatgatgctgtatttgttttaatcctttgctcctttcactctgtattatgtttgtgggattatttcctgttgttacatgtggcaataatAGTGAGCTACAAATCAGTGCTATAtttggtatatcaaccttggagccagcattcttgttaaatccatttattaaattaaacatattatctttagattattctagaat--------gtttacatacacagtcacattgcctacagctaatgatagttttatttccttcttttaaataatacaatttttatttc-ttttatatatatat-----------tttttgagatggagtctctctctgtcccccaggctggagtgcagtggtgcaatctcagcttactgcaagctccgcctccagggttcacgccattcttctgcctcagcctccggagtagctgggactacaggcgcccgccaccacgcctggctacttttttgtatttttaggggagacggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgggattacagatgtgagccaccgtgcccggcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92519234 1055 + 135191526 aacaccttagaactgctcctcctg-ccccattgtgccccttatagataataatcttctccctccccaccagggaggggtttctaatttctgacatacctgatttctgtaataaacagtatatgtatatccctaaacaatatat-----------------cttag-------tttaaaaaaatatattattcaaatagaatgaggctgggcgtggtggctcacgtctgtaatcccagcactttgggaggccgaggccggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatta------------------------------gccaggcatggtgatgcacacttgcagtcccagctgcttgggaggctgaggcacgagaatcgcttgaacccaggaggcggagacttcagtgagctaagatcgcaccactgcactccagcctgggcaacagagtgagatccatctcaaa-caaacaaaaaaaa------gcatgaggtaatgcagtatttgttttaatcctttgctccttttactctgtattatgtttgtgggattatttcctgttgttacatgtggctatagtAGTGAGCTACAAATCAGAGCTATAtttggtatatcaaccttggatccagcgttcttgttaaatccacttattaaattaaacatattatctttagattattctagaat--------gtttacatacacagtcacactgcctacagctaatgatagttttatttccttcttttaaataatacaatttttattttattttacatatttat-----------tttttgagacggagtctctctctgtcccccaggctggagtgcagtggtgcaatctcagcttaatgcaagctccgcctcccggattcacgccattcttctgcttcagcctccccagtagctgggactataggtgcccgccaccatgcctggctacttttttgtatttttagtagggacagggtttcaccgtgttggccaggattgtctcgatctcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacagacttgagccaccgtgcccggcc i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14300818 1050 - 123690457 aacaccttagaactgctcctcctg-ccccactgtgccccttgtagataataatcttctccctctccaccagggagggatttctcatttctgaaacacctgatttctgtaataaacagtatatgtatatccctaaacaatatat-----------------cttag-------tttaaaaaa--aaattattcaaatagaatgaggctgggcgtggtggctcacgtctgtaatcccagcactttgggaggccgaggccggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaatta------------------------------gccaggcatggtggtgcacacttgtagtcccagctgcttgggaagctgaggcatgagaatcgcttgaacccaagaggcagagacttcagtgagctaagatcgcaccactgcactccagcctgggcaacagagcaagacctgtctcaaa-aaaaaaataa---------taatgagatgatgctgtatttgttttaatcctttgctcctttcactctgtattatgtttgtgggattatttcctgttgttacatgtggcaataatAGTGAGCTACAAATCAGAGCTATAtttggtatatcaaccttggatccagcattcttgttaaatccacttattaaattaaacatattatctttagattattcaagaat--------gtttacatacacagtcacactgcctacagctaatgatagttttatttccttcttttaaataatacaatttttattttattttatatataaat-----------tttttgagacggagtctctctctgtcccccaggctggagtgcagcggtgcaatctcagcttagtgcaagctccacctcccggattcacaccattcttctgcgtcagcctcctgagtagctaggactacaggtgcctgccaccacacctggctacttttttgtatttttagtggagatgggatttcgctgtgttggccacgatggtctcgatctcctgacctcgtgattcacccgcctcagcctcccaaagtgctgggattacagatgtgagccactgtgcccggcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103586280 1066 + 192599291 aacaccttagaattgctcctcctgcccccattgtgccccttataaatcataatcttctccctccccaccagggagggatttctaatttctgaaatatctgatttctgtgataaacagcatatgtatatccctaaacaatatag-----------------catagttttttttttttaaaa--aaaatgttcaaatagaatgaggccaggcgcggtggctcacatctgtaatccca-cactttgggaggccaaggcgagcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattannnnnnnnnnnnnnnnnnnnnnnnnnnnnn----------------------------------nnnnngggaggctgaggcaggagaatcacttgaacccgggaggcagagacttcagtgagctaagattgcaccactgcactccagcctgggcaacagagtgagatccgtctcaaa-acaacaaaaaaaaa-----gaatgagatggtgctgtatttattttaatcctttgctcctttcactctgtattatgtttgtgggattatttcctgttgttacatgtggcaataatAGTGAGCTACAAATCAGAGCTATAtttgatatatcaaccttggatccagcattcttgttaaatccacttattaaattaaacatcttatctttagagtattctagaatactctaaagtttacatacacagtcacactgcctacagctaatgatagttttatttccttcttttaaaaaatacaatttttattttattttatatatatata----------tttttaagatggagtctcactctgttccccaggctggagtgcagtggtgtgatctcagctcacagcaagctccgcctcctgggttcacgtcattctccttcctcagcctccggagtagctggcactacaggcgcccgccaccacacccagctaattttttgtatttttagtggagacggggtttcaccgtgttagccagaatggtctcgatctcctgacctcgtgatccgccctcctcagcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103222682 1067 - 192460366 aacaccttagaattgctcctcctgcccccattgtgccccttataaatcataatcttctccctccccaccagggagggatttttaatttctgaaatatctgatttctgtgataaacagcgtatgcatatccctaaacaatatag-----------------catag-ttttttttttaaaaa--aaattattcaaatagaatgaggccaggcgcggtggctcacatctgtaatccca-cactttgggaggccaaggcgagcagatcacctgaggtcaggagttcgagaccagcctggcccacatggtgaaaccctgtctctactaaaaatacaaaaatta------------------------------gccaggcatggtggtgcacacttgtagtcccagctacttgggaggctgaggcatgaaaatcacttgaacccgggaggcagagacttcagtgagctaagattgcaccactgcactccagcctgggcaacagagtgagatccgtctcaaa---aaaaaaaaaaaa-----gaatgagatggtgctgtatttattttaatcctttgctcctttcactctgtattatgtttgtgggattatttcctgttgttacatgtggcaataatAGTGAGCTACAAATCAGAGCTATAtttgatatatcaaccttggatccagcattcttgttaaatccacttattaaattaaacatcttatctttagagtattctagaatactctaaagtttacatacacagtcacactgcctacagctaatgatagttttatttccttcttttaaaaaatacaatttttattttattttatatatatata----------tatttaagatggagtctcactctgttccccaggctggagtgcagtggtgtgatctcagctcacagcaagctccgcctcctgggttcacgtcattctccttcctcagcctccggagtagctggcactacaggcgcccgccaccacacccagctaattttttgtatttttagtggagacggggtttcaccgtgttagccagaatggtctcgatctcctgacctcgtgatccgccctcctcagcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101023845 1069 + 187378091 AACACCTTAGAATTGCTCCTCCTGCCCCCATTGTGCCCCTTATAAATCATAatcttctccctccccaccaggGAGGGATTTCTAATTTCTGAAATATCTGATTTCTGTGATAAACAGCGTATGTATATCCTTAAACAATATAG-----------------cgtag--ttttttttaaaaaa--aaattattcaaatagaatgaggccaggcgcggtggctcacatctgtaatccca-cactttgggaggccaaggcgagtagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccttgtctctactaaaaatacaaaaatta------------------------------gccaggcgtggtggtacacacttgtagtcccagctacttgggagactgaggcacgagaatcacttgaacccgggaggcagagacttcagtgagctaagattgcaccactgcactccagcctgggcaacagagtgagatccgtctcaaa-aaaaaaaaaaaaaa-----gaatgagatggtgctgtatttattttaatccttTGCTCCTTTCACTCTGTATTATGTTTGTGGGATTATTTCCTGTTGTTACATGTGGCAATAATAGTGAGCTACAAATCAGAGCTATATTTGATATATCAACCTTGGATCCAGCATTCTTGTTAAATCCACTTATTAAATTAAACATATTATCTTTAGAGTATTCTAGAAT--------GTTTACATACACAGTCACACTGCCTACAGCTAatgatagttttatttccttcttttaaataatacaatttttattttattttatatatatatatatatatttttttttaagacggagtctcactctgttccccaggctggagtgcagtggtgtgatctcggctcacagcaagctccgcctcctgggttcatgtcattctccttcctcagcctccggagcagctggcactacaggcgcccaccaccacacccagctaattttttgtatttttagtggagacgggttttcaccatgttagccagaatggtctc-atctcctgacctcgtgattcgccctcctcagcctcccaaagtgctgggattacaggcatgagccaccgcgcccggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4891369 1065 + 91754291 aacaccttagaattgctcctcctgcccccattgtgccccttataaatcataatcttctccttccccaccggggagggatttctaatttctgaaatgtctgatttctgtgataaacagcgtatgtatatccctaaacaatatag-----------------tgtag---tttttttaaaaaa--aaattattcaaatagaatgaggccaggcacggtggctcacatctgtaatccca-cactttgggaggccaaggcgagcagatcacctgaggtcaggagttcgacaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaatta------------------------------gccaggcatggtggtacacacttgtagtcccagctacttgggaggctgaggcacgagaatcacttgaacccaggaggcagagacttcggtgagctaaggttgcaccactgcacttcagcctgggcaacagagtgagatccgtctcaaaaaaaaaaaaaaaaaa-----gaatgagatggtgctgtatttattttaatcctttgctcctttcactctgtattatgtttgtgggattatttcctgttgttacatgtggcaataatAGTGAGCTACAAATCAGAGCTATAtttgatatatcaaccttggatccagcattcttgttaaatccacttattaaattaaacatattatctttagtgtattctagaat--------gtttacatacacagtcacactgcctacagctaatgatagttctatttccttcttttaaataatacaatttttattttattttttttatatatatattt-----attttaagacggagtctcgctctgttccccaggctagagtgcagtggtgtgatctcggctcacagcaagctctgcctcctgggttcatgtcattctccttcctcagcctccggagtagctggcactacaggtgcccaccaccacacccagctaattttttgtatttttagtggagacggggtttcaccgtgttagccagaatggtctcgatctcctgacctcgtgatccgccctcctcagcctcccaaagtgctgggattacaggcatgagccaccgcacccagcc i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24751329 3741 - 42124431 I e calJac3.chr15 92369552 728 - 98464013 I a score=653418.000000 s hg38.chr3_KI270781v1_alt 13847 233 + 113034 taaataatataattttttatgtctttgttttgccttctctcaccggcttcgatatacaataatatg-ttaagtggaaatagtgaaattgagcatccttgcctcattcctgacctaaaggtgaaaagtttcagcattgtaccattaattatgatgtttgtgataagtttttttt-gtaggtaaccttactgtattaaggaagtttccttatattactagcttgataggaggttttt s panTro4.chr3 13764177 234 - 202329955 taaataatataattttttatgtctttgttttgccttctctcaccggcttcgacatacaataatatg-ttaagtggaagtagtgaaattgagcatacttgcctcattcctgacctaacggtgaaaagttttagcattgtaccattaattatgatgtttgcgataagtttttttttgtaggtaaccttactgtattaaggaagtttccttatattactagcttgataggaggttttT i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92520289 222 + 135191526 taaataatataattttttatgtctttgttttgccttctctcactggct-----------taatatg-ttaagtggaagtagtgaaattgagcatcgttgcctcattcctgacctaaaggtgaaaactttcagcattgtaccattaattatgatgtttgcgataagtttttttt-gtaggtaaccttactgtattaaggaagtttccttatattactagcttgctaggaggttttt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14301868 233 - 123690457 taaataatataattttttatgtctttgtcttgccttctctcactggcttcgacatacaataatatg-ttaagtggaagtggtgaaattgagcatccttgcctcgttcctgacctaaaggtgaaaagtttcagcatagtaccattaattatgatgtttgcaataagtttttttt-gtaggtaaccttactgtattaaggaagtttccttatattactagcttgctaggaggttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103587346 232 + 192599291 taaataatataattttttatgtctttgtcttgccttctttcactggcttcgacatacaataatatg-ttaagtggaagtggtgaaattgagcatccttgcctcattcctgacctaaaggtgaacagtttcagtattgtaccattaattatgacttttgcgataagttttttt--gcaggtaacttcactatgttaaggaagtttccttatattactagcttgctgggagGTtttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103223749 232 - 192460366 taaataatataattttttatgtctttgtcttgccttctttcactggcttcgacatacaataatatg-ttaagtggaagtggtgaaattgagcatccttgcctcattcctgacctaaaggtgaacagtttcagtattgtaccattaattatgacttttgcgataagttttttt--gcaggtaacttcactatgttaaggaagtttccttatattactagcttgctgggaggttttT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101024914 232 + 187378091 taaataatataattttttatgtctttgtctTGCCTTCTTTCACTGGCTTCGACATACAATAATATG-TTAAGTGGAAGTGGTGAAATTGAGCATCCTTGCCTCATTCCTGACCTAAAGGTGAACAGTTTCAGTATTGTACCATTAATTATGATGTTTGCGATAAGCTTTTCT--GTAGGTAACTTTACTATGTTAGGAAAGTTTCCTTATATTACTAGCTTGCtgggaggttttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4892434 232 + 91754291 taaataatataattttttatgtctttgtcttgccttctttcactggcttcgacatacaataatatg-ttaagtggaagtggtgaaattgagcttccttgcctcattcctgacctaaaggtgaacagtttcagtattgtaccattaattatgatgtttgcgataagctttttt--gtaggtaactttactatgttagggaagtttccttatattactagcttgctgggagGTtttt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92370280 229 - 98464013 taattcatataa--ttttatgtctttgtcttgcctttttttagtggctacggcagacaataatatgtttaagcagaaatggtgaagctgagcatccttgcctcattcctgatctagaggtgaaaagtttcagcatcataccattaattatcatgtttgctctaagatttttt--gtagttaactt--acatattaaggaagtttccttatattactagcttgttaagaggttCCC i calJac3.chr15 I 728 I 13 e canFam3.chr34 24751329 3741 - 42124431 I a score=48863.000000 s hg38.chr3_KI270781v1_alt 14080 34 + 113034 gtttgtttgtttgt---------ttttgttttgttttgttttg s panTro4.chr3 13764411 30 - 202329955 Gtttgtttgttt-------------ttgttttgttttgttttg i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92520511 43 + 135191526 gtttgtttgttttcttgtttttgttttgttttgttttgttttg i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14302101 30 - 123690457 gtttgtttgttt-------------ttgttttgttttgttttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103587578 31 + 192599291 gtttgtttttgt------------tttgttttgttttgttttg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103223981 21 - 192460366 GTTTGT----------------------TTTTGTTTTGTTTTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101025146 31 + 187378091 gtttgtttttgt------------tttgttttgttttgttttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4892666 31 + 91754291 gtttgtttttgt------------tttgttttgttttgttttg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24751329 3741 - 42124431 I e calJac3.chr15 92370509 13 - 98464013 I a score=6095883.000000 s hg38.chr3_KI270781v1_alt 14114 2121 + 113034 CCACAGCCCTAGGGTctaagggatgatagactaataactacagatattaagagaaaggacagggacctatgaatcttatacacaggtaaaagaccacttacctgtcaagtaaaagaaagatgccaagaataaccaaataagaaatgaatctagagacttcaacaaaaggaaatatgagaaagaaagggagacagttactgagaaatgatgtttgcattatatattgttagatttaaatggatgagaatagtgcgaaaatttgtaatatgagtgtgaagtaagaacggttttatcataagggacaaacttaatattagttataagtcaggaacactgaaccgtctttg-aaa----aaaacaaggagttgagaatatttgggaacagtgaggaagcaaaggtgttttaaaggatttatctcactgggaggagggCGCCCAAGCAGTGAGCACCTGGGGGTGTGGCAGCAGGTTGTTGCCATGTTTTGATACAACAGTAAATAAATCTAGTTTTgattaggaaagcccatgagtgcttctaatttaacaaagggggagaaagaaatgaatagtaatgaaaatacattagaaaagaggaaaaagataaaaattaagacaaatagtaaaaataaaaaaagatggaaagaataaaatcaaatatatcggctgttacactaagtgtgaaagagctgaatattcatatgaaagataaagactctcaggttggattgaaaaaccaaattaaaatgtataatttttgtaggaagcacatctaaaacaaagtgatGGTTAAAGAAATACCAGGCATACATATATTGTGATATCTGATAAATGACCTCAGGGCATTTCCCT--GTGGAACTGCCATAGATGATATAGATTAATATAGATACTATGCTACAATATCTGTATTATCCATAGTAGTTCCATAAGGAAATGCTCTGCAGTCATTTATGAATCTTCA-AAATTTTTTTAAAGAAAGTTTTCCATCATAAAACAGAACCACTTAGGAAGAAAGTCCTTTTTCACATTAATCTTgtctcagctcaaagttgccctcgtctggggagatttctttgagcccctctgcctgcttaagatgccctttctatgtggtctagcatttttaccaaattgtcatatccacgtctcaggatattgtaattattgatttatttatttgttt-ccCAGAATATTGTAAAATCA------------ACATATGCTGGTGTCCACAATACCTACATCTATGTGCCTTATGAATG----ACAACCCATAAGAATTTAACAAATGAATAAAGCAAATGTTTTCtg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgacaacatgaaattgaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcacactttaagaagatgttaaacgtaaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactgttagaaacgtggagaatgttatttaaaaacatgcacacgtaaactgcggtggaagattctaatctacatctttcaaaatctgacagatctagaagataaaaattagccaggacatagaaggtctgagtattacaatcaaccagctcaatttaatagatgtgtatagaactgtgaaacatgcaaatatagaagatgcttttttcttatgtaaataacacattggtagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagatagatagatagatggatagaca--------gatagatagacatcagtc-----atgtacttggcca-caaacaaagcttgaaaaattcaaaaaagtgaagatttttgcagggtattttctgataaatattttagaatataagagaataataataaaaagatgaccactaaactattaactgcttagaat---aaaaaaaccctggatcaatacataaatcaaaattggaataaaaactatctagaaagcaatgaatcctattttttggtatgctaaactcatattcgaagg--aaaaatcacagtcttaaatgccttcattgttaaagaaaactgaaattaaaggaatatggaactcattttagaaaattaaaaatggaacaAATACTTCAGTCATGGTAATTAGCAA s panTro4.chr3 13764441 2115 - 202329955 CCACAGCCCTAGGGTctaagggatgatagactaataactacagatattaagagaaaggacagtgacctatgaatcttatacacaggtaaaagaccacttacctgtcaagtaaaagaaagatgccaagaataaccaaataagaaatgaatctagagacttcaacaaaaggaaatatgagaaagaaagggagacagttactgagaaatgatgtttgcattatatattgttagatttaaatggatgagaatagtgcgaaaatttgtaatatgagtgttaagtaagaacggttttatcataagggaaaaacttaatattagttataaatcaggaacactgaaccgtcttag-aaa----aaaacaaggagttgagaatatgtgggaacagtgaggaagcaaaggtgttttaaaggatttatctcactgggaggagggtgcccaagcagtgagcacccgggggtgtgacagcaggttgttgccatgttttgatacaacagtaagtaaatctagttttgattaggaaagcccatgagtgcttctaatttaacaaagggggagaaagaaatgaatagtaatgaaaatacattagaaaagaggaaaaagataaaaattaagacaaatagtaaaaataaaaaa-gatggaaagaataaaatcaaatatattggctgttacactaagtgtgaatgagctgaatattcatatgaaagatagagactctcaggttggattgaaaaaccaaattaaaatgtataatttttgtaggaagcacatctaaaacaaagtgatGGTTAAAGAAATACCAGGCATACATATATTGTGATATCTGATAAATGACCTCAGGGCATTTCCCT--GTGGAACTGCCATAGATAATATAGATTAATATAGATACTATGCTACAATATCTGTATTATCCATAGTAGTTCCATAAGGAAATGCTCTGCAGTCATTTATGAATCTTCA-AATTTTTTTTAAAGAAAGTTTTCCATTATAAAACAGAACCACTTAGGAAGAAAGTCCTTTTTCACATTAATCTTgtctcagctcaaagttgccctcgtctggggagatttctttgagcccctctgcctgcttaagatgccctttctatgtggtctagcatttttaccaaattgtcatatccacgtctcaggatattgtaattattgatttatttctttgttt-ccCAGAATATTGTAAAATCA------------ACATATGTTGGTGTCCACAATACCTACATCTATGTGCCTTATGAATA----ACAACCCATAAGAATTTAACAAATGAATAAAGCAAATGTTTTCtg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgacaacatgaaattgaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcacactttaagaagatgttaaacgtaaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactgttagaaacgtggagaatgtgatttaaaaacatgcacacgtaaactgcggtggaagattctaatctacatctttcaaaatctgacagatctagaagataaaaattagccaggacatagaagttctgagtattacaatcaaccagctcaatttaatagatgtgtatagaactgtgaaacatgcaaatatagaagatgcttttttcttatgtaaataacacattggtagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagatagatagat----ggatagaca--------gatagatagacatcagtc-----atgtacttggcca-caaacaaagcttgaaaaattcaaaaaagtgaagatttt-acagggtattttctgataaatattttagaatacaagagaataataataaaaagatgaccactaaactattaactgcttagaaT---AAAAAAACCCTGGATCAATACATAAATCAAAATTGGAATAAAAACTATCTAGAAAGCAATGAATCCTATTTTTTGGTATGTTAAACTCATATTCGAAGG--AAAAATCACAGTCTTAAATGCCTTCATTGTTAAAGAAAACTGAAATTAAAGGAATATGGAACTCATTTTAGAAAATTTAAAATGGAACAAATACTTCAGTCATGGTAATTAGCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92520554 2114 + 135191526 CCACAGCCCTAGGGTCTAAGGGATGATAGAATAATAACTGCATATATTAAGAGAAAGGACAGTGACCTATGAATCTTATACACAGGTGAAAGACCACTTACCTGTCAAGTAAAAGAAAGATGCCAAGAATAACCAAATAAGAAATGAATCTAAAGACTTCAACAAAAGGAAATATGAGAAAGAAAGGGAGACAGTTACTGATAAATGATGTTTGCATTATATATTGTTAGATTTAAATGGATGAGAATAGTGTGAAAATTTGTAATGTGAGTGTTAAGTAAGAACGGTTTTATCATAAGGGAAAAACTTAATATTAGTTGTAAGTCAGGAACACTGAACCGTCTTAG-AAA----AAAACCAGGAGTTGAGAATATGTGGGAACAGTGAGGAAGCAAAGGTGTTTTAAAGGTTTTATCTCACTGGGAGGAGGGTGCC----CAGTGAGCACCCGGGGGTGTGACAGCAGGTTGTTGCCATGTTTTGATACAACAGTAAATAAATCTAGTTTTGATTAGGAAAGCTCATGAGTGCTTCTAATTTAACAAAGGGGGAGAaagaaatgaatagtaatgaaaatacattagaaaagaggaaaaagataaaaattaagacaaatagtaaaaataaaaaaagatagaaagaataaaatcaaatatattgac--ttacactaagtgtgaatgagctgaatattcatatgaaagatagagactctcaggttggattgaaaaaccaaattaaaatgtataatttttgtaggaagcacatctaaaacaaagtgatGGTTAAAGAAATACCAGGCATACATATATTGTCATATCTGATAAATGACCTCAGGGCATTTCCCT--GTGGAACTACCATAGATAATATAGATTAATAGAGATAATATGTTACAATATCTATATTATCTATAGTAGTTCCATAAGGAAATGCTCTGCAGTGATTTATGAATCTTCA-AAATTTTTTTAAAGAAAGTTTTCCATCATAAAACAGAACCACTTAGGAAGAAAGTCCTTTTTCACATTAATCTTgtctcagttcaaagttgccctcctctggggagctttctttgagcccctctgcctggttaagatgccctttctatgtgggctagcacttttaccaaattgtcatatccacacctcaggatattgtaattattgatttcttggctTAG----CCAGAATATTGTAAAATCA------------ACATATGTTGGTGTCCACAATACCTAGATCTATGTGCCTTACGAATG----ACAACCCATAAGAATTTAACAAATGAATAAAGCAAATGTTTTCTG-----aaagaaaaaaagaaataccaggcaaatacaaacaaaaagctaaaacgacaacctgaaattaaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcacactttaagaaaatgttaaacataaatctctaaacactaaacatcatggccatcaaatctataaggcaaaaactgttagaaacgtggagaatgtgatttaaaaacatgcacatgtaaactgtggtggaagattctaatctacatctttcaaaatctgacagatctagaagataaaaattagccaggacatagaagatctcagtattacaatcaaccagctcaatttaatagatgtgtatagaactttgaaacctacaaatatagaagatgcttttttctcatgtaaataacacactggtagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagatagacagatagacggatagaca--------gatagatagacatcagtc-----acgtacttggcca-caaacaaagcttgaaaaattcaaaaaagtgaagaattt-gcagggtattttctgataaatattttagaatacaagataataataataaaaagatgaccactaaactattaactgcttagaataaaaaaaaaaccctggatcaatacataaatcaaaattggaataaaaactatctagaaAGCAATGAATCCTATTTTTTGGTATGTTAAACTCATATTCAAAGG--AAAAATCACAGTCTTAAATGCCTTCATTGTTAAAGAAAACTGAAATTAAAGGAATATGGAACTCATTTTAGAAAATTAAAAGTGGAACAAATAATTCAGTCATGGTAATTAGTAA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14302131 2128 - 123690457 CCACAGCCCTAGGGTctaagggatgatagaataataactacagatattaagagaatggacagtgacctatgaatcttatacacaggcaaaagaccacttacctgtcaagtaaaagaaagatGCCAAGAATAACCAAATAAGAAGTGAATCTAGAGACTTCAACAAAAGGAAATACGAGAAAGAAAGGGAGACAGTTACTGATAAATGATGTTTGCATTATATATTGTTAGATTTAAATGGATGAGAATAGTGAGAAAATTTGTAATATGA--GTTAAGTAAGAACGGTTTTATCATCAGGGAAAAACTTAGTGTTAGTTATAAGTCAGGAACACTGAACCGTCTTAGAAAA----AAAACAAGGAATCGAGAATATGTgggaagagtgaggaagcaaaggtgttttaaaggttttatctcactgggaggagggcgcccaagcagtgagcacccgggggtgtgacagcaggttgttgccatgttttgatacaacagtaaataaatctagttttgattgggaaagcccatgagtgcttctaatttaacaaagggggagaaagaaatgaatagtaatgaaaatacattagaaaagaggaaaaagataaaaattaagacaaatagtaaaaataaaacaagatgggaagaataaaatcaaatatattgactgttacactaagtgtgaatgagctgaatattcatatgaaagatagagactctcaggttggattgaaaaaccaaattaaaatgtataatttttgtaggaaacacatctaaaacaaagtgatAGTTAAAGAAATACCAGGCATACGTATATTGTCATACCTGATAAATGACCTCAGGGCACTTCCCT--GTGGAACTACCatagataatatagattaatatagataatatGCTACAATATCTATATTATTTATAGTAGTTCCATAAGGAAATGCTCTGCAGTCATTTATGAGTCTTCATAAATTTTTTTAAAGAAAGTTTTTCATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTTCACATTAATCTTgtctcagctcaaagttgccctcctctgggaagctttctttgagcccctctgcctggttaagatgccctttctatgcggtctagcatttttactaaattgtcatatccacgtctcaggatattgtaattattgatttatttctttgtttccccagaatattgtaaaatcA------------ACATATGTTGGTGTCCACAATACCTAGA------TGCCTTATGAATG----ACAACACATAAAAATTTAACAAATGAATAAAGCAAATGTTTTCTG-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatggcaacatgaaattgaaggttaaaagtattaaataagacagaattagtatgtaatgataaaaggcacactttaagaagatgttaaacataaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactgttagaaacgtggagaatgtgatttaaaaacctgcacacgtaaactgtggtggaagattctaatctacatctttcaaaatgtgacagatctagaagatagaaagtagccaggacatagaagttctgagtattataattaaccagctccatttaatagatgtgtatagaactttgaaacctacaaatatagaagatgcttttttcttatgtaaataacacattggtagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagatatgatagatagatgatagatagatagatagatagatagaca--------gatagatagacatcagtc-----atgtacttggcca-caaacaaagcttgaaaaattcaaaaaagtgaagatttt-gcagggtattttctgataaatattttagaatacaagagaataataataaaaagatgaccactaaactattaactgcttagaat-aaaaaaaaaccctgaatcaatacataaatcaaaattgaaatgaaaactatctagaaagcaatgaatcctattttttggtatgttaaactcatattcaaagg--aaaaatcacagtcttaaatgccttcattgttaaagaaagctgaaactaaaggaATATGGAACTCATTTTAGAAAATTTAAAATGGAACAAATAATTCAGTCATGGTAATTAGTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103587609 2117 + 192599291 CCAcaaccctaggatctaagggatgatggaataataactacagatattaagagaaaggacagtgacctatgaatcttacacacaggtaaaagaccacttacctgtcaagtaaaagaaagatgccaagaataaccaaataaggaatgaatctagagacttcaacaaaaggaaatatg-gaaagaaagggagacagttactgagaaatgatgtttgcattatatattgttagatttaaatggatgagaatagtg-gaaaatttgtaatatgagtgttaagtaagaactgttttatcataagggaaaaacttaatattagttataagtcaggaacactgaaccgtcttag-aaaaaataaaacaaggagttgagaatatgtgggaagagtgaggaagcaaaagtgttttagaggttttatctcactgggaggagggcgcccaagcagtgaacaccccgtggtgtgagagcaggttgttgccgtgttttgatacaactgtaaataaatctagttttgattaggaaagcccaggagtgcttctaatttaacaaaggaggagaaagaaatgaatagtaatgagaatacgttagaaaagagggaaaagataaaaattaagacaaatagtaaaaataaaacaagatggaaagaataaaatcaaatatatcgactgttgcactaagtgtgaatgagctgaatattcatagaaaagatagagactctcaggttggactgaaaaaccaaattcaaatgtataatttttgcaggaagcacatctaaaataaagtgatGGTTAAAGAAATACCAGGCATACATATATTGGCATGTCTGATGAATGACCTC--GGCATTTGCCT--GTGGAACCACCatagataatatagattaatatagataatatGCTACAATATCTATATTATCTATAGTAGTTCCATAAGAAAATGCTCTGCGGTCATTTATGAATCTTCATAAAATTTTTTAAAGAAAGTTTTCCATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTCCACATTAATCTTgtcttagctcaaagttgccctcctctgggaagctttctttgagcccctctgcctggttaagatgccctttctatgtggtctagaatttttactaaactgtcacatccacgtctcaggacattgtaattattgatttatttctttgtttccccagaatattgtaaagtcA------------ACATATGTTGGTGTCCACAATACCTAGATCTATGTGCCTTATGAATG----ACAATCCATAAGAATTTAACAAATGAATAAAGCAAATATTTTCtg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgacaacatgaaactgaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcacactttaagaagatgttaaacataaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactatcagaaacatggagaatgtgattttaaaaaatgcacacataaactgtggtggaagattctaatctacatctttcaaaatctgacatatctagaagataaaaagtagccaggatatagaagttctgagtgttacaatcaaccagctcaatttaataggtgtgtatagaactttgaaacctacaaatatagaaGATGCTTTTTT-------------------------------ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------------------------------------------------------------------NNCATCAGtc-----atgcacttggcca-caaacaaagcttgaaaaatttaaaaaagtgaagatttt-gcagggtattttctgatcaatatttcagaatacaagagaataataataaaaagatgatcactaaactattaactgcttagaat--aaaaaaaaccctggatcaatacataaatcaaaattggaataaaaactatctagaaagcaatgaattctattttttggtatgttaaactcatattcaaagg--aaaaatcacagtcttaaatgccttcattcttaaagaaaactgaaattagaggaatatgaaactcattttagaaaattaaaaatggaacaaataattcagtcatggtaattagtaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103224002 2106 - 192460366 CCAcaaccctaggatctaagggatgatggaataataactacagatattaagagaaaggacagtgacctatgaatcttacacacaggtaaaagaccacttacctgtcaagtaaaagaaagatgccaagaataaccaaataaggaatgaatctagagacttcaacaaaaggaaatatg-gaaagaaagggagacagttactgagaaatgatgtttgcattatatattgttagatttaaatggatgagaatagtgcgaaaatttgtaatatgagtgttaagtaagaactgttttatcataagggaaaaacttaatattagttataagtcaggaacactgaaccgtcttag-aaaaaataaaacaaggagttgagaatatgtgggaagagtgaggaagcaaaagtgttttagaggttttatctcactgggaggagggcgcccaagcagtgaacaccccgtggtgtgagagcaggttgttgccgtgttttgatacaactgtaaataaatctagttttgattaggaaagcccaggagtgcttctaatttaacaaaggaggagaaagaaatgaatagtaatgagaatacgttagaaaagagggaaaagataaaaattaagacaaatagtaaaaataaaacaagatggaaagaataaaatcaaatatatcgactgttgcactaagtgtgaatgagctgaatattcatagaaaagatagagactctcaggttggactgaaaaaccaaattcaaatgtataatttttgcaggaagcacatctaaaataaagtgatGGTTAAAGAAATACCAGGCATACATATATTGGCATGTCTGATGAATGACCTC--GGCATTTGCCT--GTGGAACCACCatagataatatagattaatatagataatatGCTACAATATCTATATTATCTATAGTAGTTCCATAAGAAAATGCTCTGCGGTCATTTATGAATCTTCATAAAATTTTTTAAAGAAAGTTTTCCATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTCCACATTAATCTTgtcttagctcaaagttgccctcctctgggaagctttctttgagcccctctgcctggttaagatgccctttctatgtggtctagcatttttactaaattgtcacatccacgtctcaggacattgtaattattgatttatttctttgtttccccagaatattgtaaagtcA------------ACATATGTTGGTGTCCACAATACCTAGATCTATGTGCCTTATGAATG----ACAATCCATAAGAATTTAACAAATGAATAAAGCAAATATTTTCtg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgacaacatgaaactgaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcatactttaagaagatgttaaacataaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactatcagaaacatggagaatgtgattttaaaaaatgcacacataaactgtggtggaagattctaatctacatctttcaaaatctgacatatctagaagataaaaagtagccaggatatagaagttctgagtattacaatcaaccagctcaatttaataggtgtgtatagaactttgaaacctacaaatatagaagatgcttttttcttatgtAAGTAACAC--Tgatagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagacggatggac------------------------agatagaCATCAGTc-----atgcacttggcca-caaacaaagcttgaaaaatttaaaaaagtgaagatttt-gcagggtattttctgatcaatatttcagaatacaagagaataataataaaaagatgatcactaaactattaactgcttagaat--aaaaaaaaccctggatcaatacataaatcaaaattggaataaaaactatctagaaagcaatgaattctattttttggtatgttaaactcatattcaaagg--aaaaatcacagtcttaaatgccttcattcttaaagaaaactgaaattagaggaatatggaactcattttagaaaattaaaaatggaacaaataattcagtcatggtaattagtaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101025177 2074 + 187378091 ccacaACTGTAGGGTCTAAGGGATGATGGAATAATAACTACAGATATTAAGAGAAAGGACAGTGACCTATGAATCTTACACACAGGTAAAAGACCACTTACCTGTCAAGTAAAAGAAAGATGCCAAGAATAACCAAATAAGGAAAGAATCTAGAGACTTCAACAaaaggaaatatg-gaaagaaagggagacagTTACTGAGAAATGATGTTTGCATTATATATTGTTAGATTTAAATGGATGAGAATAGTGCGAAAATTTGTAATATGAGTGTTAAGTAAGAACTGTTTTATCATAAAGGAAAAACTTAATATTAGTTATAAGTCAGGAACACTGAAccgtcttag-aaaaaaaaaaacaaggagttGAGAATATGTGGGAAGAGTGAGGAAGCAAAAGTGTTTTAGAGGTTTTATCTTACTGGGAGGAGGGCGCCCAAGCAGTGAACACCTCGTGGTGTGAGAGCAGGTTGTTGCCGTGTTTTGATACAACTGTAAATAAATCTAGTTTTGATTAGGAAAGCCCAGGAGTGCTTCTAATTTaacaaaggaggagaaagaaatgaatagtAATGAGAATACgttagaaaagagggaaaagataaaaattaagacaaatagtaaaaataaaacaagatggaaagaataaaatcaaatatatcgACTGTTGCACTAAGTGTGAATGAGCTGAATATTCATAGAAAAGATAGAGACTCTCAG--------------------------------TTTTTGCAGGAAGCACATCTAAAATAAAGTGATGGTTAAAGAAATACCAGGCATACATATGTTGGCATGTCTGATGAATGACCTC--GGCATTTGCCT--GTGGAACCACCatagataatatagattaatatagataatatGCTACAATATCTATATTATCTGTAGTAGTTCCATAAGGAAATGCTCTGCAGTCATTTGTGAATcttcataaaattttttaaagaaagttttccATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTCCACATTAATCTTGTCTTAGCTCAAAGTTGCCCTCCTCTGGGAAGCTTTCTTTGAGCCCCTCTGCCTGGTTAAGATGCCCTTTCTATGTGGTCTAGCATTTTTACTAAATTGTCACATCCACGTCTCAGGACATTGtaattattgatttatttctttgtttccccAGAATATTGTAAAGTCA------------ACATATGTTGGTGTCCACAATACCTAGATCTATGTGCCTTATGAATG----ACAATCCGTAAGaatttaacaaatgaataaagcaaatattttctg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgaCAATATGAAACTGAAGGTTAAAAGTATTAAATAAGACAGAGATaatatgtaatgataaaaggcACACTTTAAGAAGATGTTAAACATAAATCTCTAAACACTAAACATCATGGCAGTCAAATCTATAAGGCAAAAACTATCAGAAACATGgagaatgtgatttttaaaaatgcacacataAACTGTGGTGGAAGATTCTAATCTACATCTTTCAAAATCTGACATATCTAGAAGATAAAAAGTAGCCAGGACATAGAAGTTCTGAGTATTACAATCAACCAGCTCAATTTAATAGGTGTGTATAGAACTTTGAAACCTACAAATATAGAAGATGCTTTTTTCTTATGTAAGTAACac--tgatagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagacggatggac------------------------agatagaCATCAGTC-----ATGCACTTGGCCACCAAACAAAGcttgaaaaattcaaaaaagtgaAGATTTT-TCAGGGTATTTTCTGATCAATATTTCAGAATAcaagagaataataa-aaaaagatgatCACTAAACTATTAACTGCTTAGAAT--aaaaaaaaCCCTGGATCAATACATAAATCAAAATTGGAATAAAAACTATCTAGAAAGCAATGAATTCTATTTTTTGGTATGTTAAACTCATATTCAAAGG--AAAAATCACAGTCTTAAATGCcttcattcttaaagaaaactgaaattagagGAATATGGaactcattttagaaaattaaaaatggaacaaatAATTCAGTCATGGtaattagtaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4892697 2104 + 91754291 CCACAACCGTAGGGTctaagggatgacggaataataactacagatattaagagaaaggacagtgacctatgaatcttacacacaggtaaaagaccacttacctgtcaagtaaaagaaagatgccaagaataaccaaataaggaatgaatctagagacttcaacaaaaggaaatatg-gaaagaaagggagacagttactgagaaatgatgtttgcattatatattgttagctttaaatggatgagaatagtgcgaaaatttgtaatatgagtgttaagtaagaactgttttatcataagggaaaaacttaatattaattataagtcaggaacactgaaccgtcttag-aaaaa--aaaacaaggagctgagaatatgtgggaagagtgaggaggcaaaaatgttttagaggttttatctcactgggaggagggcgcccaagcagtgaacaccccgtggtgtgagagcaggttgttgccgtgttttgatacaactgtaaataaatctagttttgattaggaaagcccaggagtgcttctaatttaacaaaggaggagaaagaaatgaatagtaatgagaatacgttagaaaagaggaaaaagataaaaattaagacaaatagtaaaaataaaacaagatggaaagaataaaatcaaatatatcgactgttgcactaagtgtgaatgagctgaatattcatagaaaagatagacactctcaggttggattgaaaaaccaaattcaaatgtataatttttgcaggaagcacatttaaaataaagtgatGGTTAAAGAAATACCAGGCATACATATATTGGCATGTCTGATGAATGACCTC--GGCATTTGCCT--GTGGAACCACCatagataatatagattaatatagataatatGCTACAATATCTATATTATCTATAGTAGTTCCATAAGAAAATGCTCTGCAGTCATTTATGAATCTTCATAAAATTTTTTCAAGAAAGTTTTCCATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTCCACATTAATCTTgtcttagctcaaagttgccctcctctgggaagctttctttgagcccctctgcctggttaagatgccctttctatgtggtctagcatttttactaaattgtcacatccacgtctgagaacattgtaattattgatttatttctttgtttccccagaatattgtaaagtcA------------ACATATGCTGGTGTCCACAATACCTAGATCTATGTGCCTTATGAATG----ACAATCCATAAGAATTTAACAAATGAATAAAGCAAATATTTTCtg-----aaagaaaaaaagaaataccaggcaaatacaaagaaaaagctaaaatgacaacatgaaactgaaggttaaaagtattaaatgagacagagataatatgtaatgataaaaggcacactttaagaagatgttaaacataaatctctaaacactaaacatcatggcagtcaaatctataaggcaaaaactatcagaaacatggagaatgtgattttaaaaaatgcacacataaactgtggtggaagattctaatctacatctttcaaaatctgacatatctagaagataaaaagtagccaggacatagaagttctgagtattacaatcaaccagctcaatttaataggtgtgtatagaactttgaaacctacaaatatagaagatgcttttttcttatgtAAATAACAC--Tgaaagatgatagat-----------------------------------------------------------------------------at---------------------agatggatagat-----------atgatagatggatggac------------------------agatagaCATCAGTc-----atgcacttggcca-caaacaaagcttgaaaaattcaaaaaagtgaagatttt-gcagggtattttctgatcaatatttcagaatacaagagaataataataaaaagatgatcactaaactcttaactgcttagaat--tttaaaaaccctggatcaatacataaatcaaaattggaataaaaactatctagaaagcaatgaattctattttttggtatgttaaactcatattcaaagg--aaaaatcacagtcttaaatgccttcattcttaaagaaaactgaaattagaggaatatggaactcattttagaaaattaaaaatggaacaaataattcagtcatggtaattagtaa i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92370522 2146 - 98464013 CCATAGCCCTAGGGTCTAAGGGATGATAGAATAATGACTACAGATATCAAGAGAA-----AGTGACCTATGAATCTTATACACTGGTAAAAGAGCACTTACCTGTCAAGTAAAAGAAAGATACCAAGACTAATCAAATAAGAAATAAATCTAGAAACTTCAATACAAGGAAATATGAGAAAGAAAGGGAGACAGTTATTGAGAGATGATATTTACATTATATATTGTTAGATTTGAATGGATGAGAATAGTGTGAACATTTGTAATACGAGTGTTAAGTAAGAACTGTTTTATCATAAGGGAAAA----AATATTAGTTATAAGTCA-GAAGACTGGACAGTCTTAG-GAAAA--AAACCAAGGAGTTAAGAATATGTGGGAAGAGTGAGGAAGCAAAAGTGTTTCAAAGGCTTTATCTCATTGGGAGGAGGGCACCCAGGCAGTGAGCAGCCGGGGGTGTGAGAGCAGGTTGTTGTCGTGTTTTGATACAACTGCAAATAAATATAGTTTTGATTAGGAAAGCCCAGGAGTGCTTCTAATTTAACAAAGGGTGAGAAAGAAATGGATAGTaataagaataagttaggaaaaaggaaaaagataaaaattaagataaatagtaaaaataaaataa-atggacagagtaaaatcaaacatatcaactgttacactaagtgtgaatgagctggattttcatgtaaaagatagagactctcaggttggattgaaaaaccaaattcaaatgtataatttttgtcggaagcacatctaaaacaaagtgatGGTGAAAGAAAGACCAGTCATATGTATATTGTCATATCTAATAAATAACTGCAGAGCATTTCCCTTAATGGAACTAGTAGAGATAATATAGATTAATATAGATTATACACTACCGAATCTATATTATCTCTAGTAGTTCCACAAGGAAATGCTCTGCAGTCATTTGTGAATCTTCATAAATTTTTTTAAAGAAAGTTTTCCATCATAAAACAGAACCATTTAGGAAGAAAGTCCTTTTTCACATGGATCATGTCTCAGCTCAAAGTtggcct------------------------cctctgcctggctaagatg-cctttctatgtggtctagcagttttaccaatttgtcacatccacctctcaggatactgtaattattgatttatttctttgtttctccagaatgttgtaaaatcggggctgaatcttacatatgttggtgtccacaatacctagATCTATGTGCATTGTGAGTGACAAACAAACCATACGAATTTAACAAATGAATAAGGCAAATTTTTTTTGCTTTaaagaaagaaaagaaataccaagcaaatacaaagaaaaagctagaatgacaacctgaaattgaaggctaaaagtattaaatgagacagagataatatgtaattataaaaggcacactt---gaagatgttagtcctaactctctaaacagtaaacatcgtgggaatcaaatctatgaggcaaaaaatatccgaaatatggagaatgtgatttaaaaagttgcacacgttaactgtggtggaagattctaatctgcatctttcaaaatctaacagatctagaagacaaaaattagccaggacaaagaaggtctgagtatttcaatcaaccagctcaattgaatagatgtatatagaactctgaaacctacaaatataaaaaatgcttttttcttatgtaaataacacactgatagaggatagat-----------------------------------------------------------------------------atagctagatatgtgatagacagagatagatagat-----------a-gatagatagatagatagatagatagatagattagatgatagacagacatcagtcatgtaatgtacttggcca-ccgacaaagtttgaaaaattcaaaaaagtgaagatttt-gcagagtattttctgatcaatattttagagtacaagacaataataataaaaagatgaccactgaactattaactgcttagaatcaaaagaaacctctgaatcaatacacacatcaaaatgggaataaaaactattcagaaagtcataaatcctattttttggaatgttaaactcatattcaaaggaaaaaaatctcagtcttaaatgccttcattattaaagaaaactggaattaaaggaacacagaactcatattaggaaattaaaaatggaacaaataattccgtcgtggtaattagtaa i calJac3.chr15 I 13 C 0 e canFam3.chr34 24751329 3741 - 42124431 I a score=408889.000000 s hg38.chr3_KI270781v1_alt 16235 132 + 113034 AAGTAAATGCCAAAACTAGTGAAAGTGTCAAAAAT-A-AATGGAAAGAATTTTTTAAAAAAATCCGAAATCTAACtttt-tatggtggtaaaatatacata--------tttgtcattttaacctttcatagatgtacaatta s panTro4.chr3 13766556 137 - 202329955 AAGTAAATGCCAAAACTAGTGAAAGTGTCAAAAAT-A-AATGGAAAGAATTTTTTTAAAAAATCCCAAATCTAACtttt-tatggtggtaaaatatacataat---atatttgtcattttaaccattcatagatgtacaatta i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92522668 138 + 135191526 AAATAAATTCCAAAATTCATGAAAGCATCAAAAAT-A-AATGGAAATAATTTTTTT--TAAATCCCAAATCTAAttttt-tatggtggtaaaatatacataatataatatttgtcattttaaccattcatagatgtacaatta i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304259 139 - 123690457 AAGTACATGCCAAAATTAGTGAAAGCGTCAAAAAT-A-AATGGAAAGAATTTTTTT-AAAAATCCCAAATCTAACtttt-tatggtgataaaatatatataatataatatttgtcattttgaccattcatagatgtacaatta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103589726 138 + 192599291 aagtaaatgccaaaattaataaaagagtcaaaaat-a-aatggaaAGAATGAATTT--TAAATCCCAAATCTAACtttt-tatggtggtaaaatatatataatataacatttgtcattttaaccattcatagatgtacagtta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103226108 138 - 192460366 aagtaaatgccaaaattaataaaagagtcaaaaat-a-aatggaaagaatgaattt--taaatcccaaaTCTAACtttt-tatggtggtaaaatatatataatataacatttgtcattttaaccattcatagatgtacagtta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101027251 138 + 187378091 aagtaaatgccaaaattaataaaagagtcaaaaat-a-aatggaaagaataaattt--taaatcccaaatCTAACTTTT-TatggtggtaaaatatacataatataatatttgtcattttaaccATTCATAGATGTACAGTta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4894801 138 + 91754291 aagtaaatgccaaaattaataaaagagtcaaaaat-a-aatggaaagaaTGAATTT--TAAATCCCAAATCTAACtttt-tatggtggtaaaatatacataatataatatttgtcattttaaccattcatagatgtacagtta i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92372668 137 - 98464013 aagtaaacgctaaaattagtgaaaccatcaaaaataa-aatggacagaatTTTGTT---AAGTCCCAAATCTAtttttt-tattgtggtaaaacatacataagatagtatttgtcattttaacca-tcacaggtgtacagtta i calJac3.chr15 C 0 C 0 s canFam3.chr34 24755070 130 - 42124431 AAGGAAAAGCCAAAATTAGTGAAATCGGCAATGAT-ATATTGGAAAGAA---------TAAATCTTAAACCTAATttttgtattgtgataaaatatacgtaat---acatttgtcatttcaaccattcaaaagtgtacaattg i canFam3.chr34 I 3741 I 193 a score=728414.000000 s hg38.chr3_KI270781v1_alt 16367 212 + 113034 agtggcattaaatacattcacaatgttgtataaccatcaccattatctatacccaaaacttttttatgattcccagtaaaaactctgtatgcattaaaacaataactcacccttcctccctctgcccaccagtggtaacctctattttactttctac----------------------------------agtgatacaatagttgttcttctgtgtctggttaattgcgcatagcataatgttt s panTro4.chr3 13766693 212 - 202329955 agtggcgttaaatacattcacaatgttgtataaccatcaccactatctatacccaaaacttttttatgattcccagtaaaaactctgtatgcattaaaacaataactcacccttcctccctctgcccaccagtggtaacctctattttactttctac----------------------------------agtgatacaatagttgttcttctgtgtctggttaattgcgcatagcataatgttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92522806 211 + 135191526 agtggcattaaatacattcacaatgttgtataaccatcaccactatctatacccaaaa-ttttttattattcccaataaaaactctgtatgcattaaaacaataactcacccttcctccctctgcccaccagtggtaacctctattttactttctac----------------------------------agtgatacaatagttgttcttctgtgtctggttaattgcgcatagcataatgttt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304398 212 - 123690457 agtggcattaaatacattcacaatgttgtataaccatcaccactatctatacccaaaacttttttatgattcccaatgaaaactctgtatgcattaaaacaataactcaccgttcctccctctgcccacccatggtaacctctattttactttctac----------------------------------ggtgatacaatatttgttcttctgtgtctggttaattgcacatagcataatgttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103589864 212 + 192599291 agtggcattaaatacattcagaatgttgtataaccatcaccactatctatacccaaaacttttttatgattctcaataaaaactctgtatgcattaaaacaataactcacccttcctccctctgcccactcatggtaacctctattttactttctac----------------------------------agtgatacaatatttgttcttctgtgtctggttaattgtgtgtagcataatgttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103226246 212 - 192460366 agtggcattaaatacattcagaatgttgtataaccatcaccactatctatacccaaaacttttttatgattctcaataaaaactctgtatgcattaaaacaataactcacccttcctccctctgcccactcatggtaacctctattttactttctac----------------------------------agtgatacaatatttgttcttctgtgtctggttaattgtgtgtagcataatgttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101027389 212 + 187378091 agtggcattaaatacattcagaatgttgtataaccatcaccactatctatacCCAAAACTTTTTTATGATTCTCAATAAAAACTCTGTATGCATTAAAACAATAACTcacccttcctccctctgcccactcATGGTAACCTCTATTTTACTTTCTAC----------------------------------AGTGATACAATATTTGTTCTTCTGCGTCTGGTTAATTGTGTGTAGCATAATGTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4894939 212 + 91754291 agtggcattaaatacattcggaatgttgtataaccatcaccactatctatacccaaaacttttttatgattctcaataaaaactctgtatgcattaaaacaataactcactcttcctccctctgcccacccgtggtaacctctattttactttctac----------------------------------agtgatacaatatttgttcttctgtgtctggttaattgtgtgtagcataatgttt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92372805 206 - 98464013 agtggcattaaatacattcacagtgtggtctaaccatcattactatctatacccaaaacgtttttatgattccaaataaaaactctgtatgcattaaaacaataactcacccttcctccctccacccactcatggtaacctctatttcactttttac----------------------------------caggatggaatatttg---ttctgtgtctggttaattgcacgtagc---acgttt i calJac3.chr15 C 0 C 0 s canFam3.chr34 24755393 239 - 42124431 agtgacattaaatacattcacaatgttgtgtaactgtcaccactaactatatacaaaactttttcattgtccccaacaaaaattctgtaccca-tgaaacaat------ccctttctccctcccccagcccctggtaacctctattccactctttgtgaatttgctgaatctaggtacttcatgtaagtggaattatacaatatttgtctttttgtgtctggcttatttcactaagcataatgttt i canFam3.chr34 I 193 I 2 a score=27120.000000 s hg38.chr3_KI270781v1_alt 16579 9 + 113034 aagatatat s panTro4.chr3 13766905 9 - 202329955 aagatatat i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523017 9 + 135191526 aagatatat i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304610 9 - 123690457 aagatttat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590076 9 + 192599291 aagacatat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103226458 9 - 192460366 aagatatat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101027601 9 + 187378091 AAGATATAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895151 9 + 91754291 aagatatat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373011 9 - 98464013 aagatatat i calJac3.chr15 C 0 C 0 e canFam3.chr34 24755632 2 - 42124431 I a score=528489.000000 s hg38.chr3_KI270781v1_alt 16588 227 + 113034 tcatgttACaccatcttggccaacatggtgaaaccccgtctctactaaaaattcaaaaattagctgggcgtggtggcacgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgcgccactgcactccagcctggcgacagagcaagactctgtctc s panTro4.chr3 13766914 227 - 202329955 tcatgttacaccatcttggccaacatggtgaaaccccgtctctactaaaaattcaaaaattagctgggcgtggtgacacgcgcctttagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgcgccactgcactccagcctggtgacagagcgagactccgtctc i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523026 227 + 135191526 tcatgttacacaatcttgaccaacatggtgaaaccccgtctctactaaaaattcaaaaattagctgggcgtggtggcacgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagcccagatcgcaccactgcactccagcctgagccactgcaccccaggctggcgacagagcaagactccatctc i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304619 225 - 123690457 tcatgttACaccatcttggccagcatagtgaaatcccatctctactaaaaattcaaaaattggctgggcgtggtggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggctgcagtgagctgagatcgcaccactgcactccagcctgtgccacggctctccagcctggcgacagagtgagact--gtctc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590085 225 + 192599291 taatgttacaccatcttcgccaacatggtgaaaccccatctctactaaaaattcaaaaattagctgggcatggtggtgcacgcctgtagtcccagctactcaaaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgtgccactgcactccagcctggcgaaaaaaaaaaaaaaaaaa-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103226467 227 - 192460366 taatgttACaccatcttcgccaacatggtgaaaccccatctctactaaaaattcaaaaattagctgggcatggtggtgcacgcctgcagtcccagctactcaaaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgtgccactgcactccagcctggtgacagagtgagactctgtctc i macFas5.chr2 C 0 M 4983 s papAnu2.chr2 101027610 227 + 187378091 TAATGTTACAACATcttcgccaacatggtgaaaccccatgtctactaaaaattcaaaaattagctgggcatggtggtgcacgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgtgccactgcactccagcctggtgacagagtgagactctgtctc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895160 227 + 91754291 taatgttACaccatcttcgccaacatggtgaaaccccatctctactaaaaattcaaaaattagctgggcatggtggtgcacgcttgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgtgccactgcactccagcctggcgacagagcgagactctgtctc i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24755632 2 - 42124431 I e calJac3.chr15 92373020 0 - 98464013 C a score=21021.000000 s hg38.chr3_KI270781v1_alt 16815 11 + 113034 aaaaaaaaaaa s panTro4.chr3 13767141 11 - 202329955 aaaaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523253 11 + 135191526 aaaaaaaaaaa i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304844 11 - 123690457 aaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590310 11 + 192599291 aaaaaaaaaaa i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 101027837 11 + 187378091 aaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895387 11 + 91754291 aaaaaaaaaaa i chlSab2.chr15 C 0 C 0 e macFas5.chr2 103226694 4983 - 192460366 M e canFam3.chr34 24755632 2 - 42124431 I e calJac3.chr15 92373020 0 - 98464013 C a score=5096.000000 s hg38.chr3_KI270781v1_alt 16826 2 + 113034 aa s panTro4.chr3 13767152 2 - 202329955 aa i panTro4.chr3 C 0 I 2 s ponAbe2.chr9 92523264 2 + 135191526 aa i ponAbe2.chr9 C 0 I 4 s nomLeu3.chr11 14304855 2 - 123690457 aa i nomLeu3.chr11 C 0 I 3 s rheMac3.chr2 103590321 2 + 192599291 aa i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 101027848 2 + 187378091 aa i papAnu2.chr2 C 0 I 4 s chlSab2.chr15 4895398 2 + 91754291 aa i chlSab2.chr15 C 0 I 10 s canFam3.chr34 24755634 2 - 42124431 aa i canFam3.chr34 I 2 C 0 e macFas5.chr2 103226694 4983 - 192460366 M e calJac3.chr15 92373020 0 - 98464013 C a score=16994.000000 s hg38.chr3_KI270781v1_alt 16828 7 + 113034 GACATAC s panTro4.chr3 13767156 7 - 202329955 gacatac i panTro4.chr3 I 2 C 0 s ponAbe2.chr9 92523270 7 + 135191526 gacatag i ponAbe2.chr9 I 4 C 0 s nomLeu3.chr11 14304860 7 - 123690457 gatatat i nomLeu3.chr11 I 3 C 0 s rheMac3.chr2 103590323 7 + 192599291 gatatat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103231677 7 - 192460366 GATATat i macFas5.chr2 M 4983 C 0 s papAnu2.chr2 101027854 7 + 187378091 gatatat i papAnu2.chr2 I 4 C 0 s chlSab2.chr15 4895410 7 + 91754291 GATATat i chlSab2.chr15 I 10 C 0 s canFam3.chr34 24755636 7 - 42124431 ggtatat i canFam3.chr34 C 0 C 0 e calJac3.chr15 92373020 0 - 98464013 C a score=614369.000000 s hg38.chr3_KI270781v1_alt 16835 193 + 113034 Tcatgttacagcatatatcaaaatttcatttctttttatggctgaataatgttctatctc-tgtttataccacattttgtttatctattcatctgctgatgaactctta----gattgctttcaccttttgactactgtgaataatgctgctatgaacatgagtgtacaaatatctgttgaagttcctgctttcaatt s panTro4.chr3 13767163 193 - 202329955 tcatgttacagcatatatcaaaatttcatttctttttatggctgaataatgttctatctc-tgtttataccatattttgtttatctattcatctgctgatgaactctta----gattgctttcaccttttgactactgtgaataatgctgctatgaacatgagtgtacaaatatctgttgaagttcctgctttcagtt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523277 193 + 135191526 tcatgttacagcatatatcaaaatttcatttctctttatggttgaataatgttctatctc-tgtatataccatattttgtttatctattcatctgctgatgaactctta----gattgctttcaccttttgactactgtgaataatgctgctatgaacatgagtgtacaaatatctgttgaagttcctgctttcaatt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14304867 197 - 123690457 tcatgttatagcatatatcaatatttcatttctttttatggctgaataatattctatcgc-cgtatataccacattttatttatctattcatctgttgatgaactcttagattgattgctttcaccttttgactaccgtgaataatgctgctatgaacatgagtgtacaaatatctgttgaagttcctgctttcaatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590330 193 + 192599291 tcatgttacagcgtatatcaaaatttcatttctttttatagctgagtaatgttctatctc-cgtatataccacttttgatttatctattcatctgctgatgaactcata----ggttacttttgccttttgactactgtgaataatgctgctgtgaacatgagtgtacaaatatctgttgaagttcctgttttcaatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103231684 193 - 192460366 tcatgttacagcgtatatcaaaatttcatttctttttatagctgagtaatgttctatctc-cgtatataccacttttgatttatctattcatctgctgatgaactctta----ggttacttttgccttttgactactgtgaataatgctgctgtgaacatgagtgtacaaatatctgttgaagttcctgttttcaatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101027861 193 + 187378091 tcatGTTACAGCGTAtatcaaaatttcatttctttttatggctgagtaatgtTCTATCTC-CGTATATACCACTTTtggtttatctattcatctgctgatgaacTCTTA----GGTTACTTTTGCCttttgactactgtgaataatgctgctgtgaacatgagtgtacaaatatctgttgaagttcctgttttcaatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895417 193 + 91754291 tcatgttacagtgtatatcaaaatttcatttctttttatggctgagtaatgttctatctc-cgtatataccacttttggtttatctattcatctgctgatgaactctta----ggttacttttgccttttgactactgtgaataatgctgctgtgaacatgagtgtacaaatatctgttgaagttcctgttttcaatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373020 164 - 98464013 tcatgttacagcatgtatcagaatttcgtttctttttgtggctgaatagtgttccatctc-catctacaccacattttgtt----tattcatctgttgatgaac-----------------------tttgactactgtgaacaatgctgctataaacatgaggggaca------tgtcaaagttcctgctttcaatt i calJac3.chr15 C 0 C 0 s canFam3.chr34 24755643 183 - 42124431 ccatattgtagcatatatcaaaatttcatttccttctacagtcaaataatattgcattgcatgtatattccacatgttgctt--------atctgttgctggacactta----gattg-tttctccttttggctattatgaataattctgctatgaaca--agtgtacaagtaactgtttgagtccctgctttcatct i canFam3.chr34 C 0 I 174 a score=484285.000000 s hg38.chr3_KI270781v1_alt 17028 149 + 113034 ctcttgcatatatacataggagcagaatttctggatcatacagtagttttatgccaaatctaa-tttttGTAAGATAAATAGATATCCCCTGCCGACCATTAGGAACAAATGAAAGAAATCAAATGCAAGCAATATTAGAAATTAAGAGG s panTro4.chr3 13767356 149 - 202329955 ctcttgcatagatacataggagcagaatttctggatcatacagtagttttatgccaaatctaa-tttttGTAAGATAAATAGATATCCCCTGCCGACCattaggaacaaatgaaagaaatcaaatgcaagcaatattagaaattaagacg i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523470 149 + 135191526 ctcttgcatatatacataggagcagaatttctggatcatacagtagttttatgCCAAATCTAA-TTTTTGTAAGATAAATAGATATCCCCTGCTGACCattaggaacaaatgagagaaatcaaatgcaaacaatattagaaattaagagg i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14305064 150 - 123690457 ctcttgcatatatatataggagcagaatttctggatcatacagtggttttatgccaaatctaactttttataagaTAAATAGATATTCCATGCCGACCattaggaacaaatgagagaaatcaaatgcaaacaatattagaaattagaagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590523 148 + 192599291 ctcttgcatatatacataggagcagaatttctggatcatacagtagttttacgacaaatctaa-attttgtaagaaaAATAGATATCCCATGCCGACCattaggagcagatgagagaaatcaaatgcaa-caatattagaaattaagagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103231877 148 - 192460366 ctcttgcatatatacataggagcagaatttctggatcatacagtagttttacgacaaatctaa-attttgtaagaaaAATAGATATCCCATGCCGACCattaggagcaaatgagagaaatcaaatgcaa-caatattagaaattaagagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101028054 148 + 187378091 ctcttgcaTATATACATAGGAGCAGAATTtctggatcatacagtagtttTACGACAAATCtaa-attttgtaagaaaaatagATATCCCATGCCGACTATTAGGAGCAAATGAGAGAAATCAAATGCAA-CAATATTAGAAATTAAGAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895610 148 + 91754291 atcttgcatatatacataggagcagaatttctggatcatacagtagttttatgacaaatctaa-attttgtaagaaaAATAGATATCCCATGCCGACCattaggagcaaatgagagaaatcaaatgcaa-caatattagaaattaagagg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373184 133 - 98464013 ctttt----------------gtagaatttctggatcctaaagtagttttatgccaaatctaa-tttttatgagATGAATGGATATCCCATGCCGACCATTAGGAACAACTGAGAGAAATCAAAGGCAAACACTATTAGAAATTAGAAGG i calJac3.chr15 C 0 I 307 s canFam3.chr34 24756000 150 - 42124431 cttttgaatgtatacacaggcatgcaattgctggatcatatggcaattccatgccaaatttaattttttATAAGATCAACAGATATTTCATGCCCACCattaaagacaaaagagaaaaatcaaatacaaacaatattaaaaatgagaaag i canFam3.chr34 I 174 C 0 a score=451162.000000 s hg38.chr3_KI270781v1_alt 17177 157 + 113034 GTGATATAATGCCAGATACAAAAAGAGAGAAAAATAATTATAAGACAATATTACATACAACCCTAGGGCACCCAACTTGAAAATCTAGAGATTTGTTTCAACAAATCTAGGAATTGTTGAATTCCTAGAAAAACAT-AAACTGATATC-AAA----------------------------AGAGATT s panTro4.chr3 13767505 138 - 202329955 gtgatataatgccagatacaaaaagagagaaaaataattataagacaatattacatacaaccctagggcaaccaacttgaaaatctagaga-------------------aaattgttgaattcctagaaaaacat-aaactgatatc-aaa----------------------------agagatt i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523619 138 + 135191526 gtgatataatgccagatacaaaaagagagaaaaataattataagacaatattacatacaaccctatggcaaccaacttgaaaatctagaga-------------------aaattgttgaatttctagaaaaacat-aaactgatatc-aaa----------------------------agagatt i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14305214 137 - 123690457 gtgatataatgccagatacaaaac-agagaaaaataattataagacaatatgacatacaatcttatggcaaccaacttgaaaatctagaga-------------------aaattgctgaattcctagaaaaacat-aaactgatatc-aaa----------------------------agagatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590671 138 + 192599291 atgatataacgccagatacaaaaagagagaaaaataattataagacaatattacatagaaccctatggcaaccaacttgaaaatctagaga--------------------aattgttgaattcctagaaaaacat-aaactgatatcaaaa----------------------------aaagatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103232025 138 - 192460366 atgatataacgccagatacaaaaagagagaaaaataattataagacaatattacatagaaccctatggcaaccaacttgaaaatctagaga--------------------aattgttgaattcctagaaaaacat-aaactgatatcaaaa----------------------------aaagatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101028202 138 + 187378091 ATGATATAACGCCAgatacaaaaagagagaaaaataattataagacaATATTACATAGAACCCTATGGCAACCAACTTGAAAATCTAGAGA--------------------AATTGTTGAATTCCTAGAAAAACAT-AAACTGATAtcaaaa----------------------------aaagatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895758 138 + 91754291 atgatataacaccagatacaaaaagagagaaaaataattataagacaatattacatagaaccctatggcaaccaacttgaaaatctagaga--------------------aattgttgaattcctagaaaaacat-aaactgatatcaaaa----------------------------aaagatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373624 134 - 98464013 GTGATATAATGCTGGATACAAAA-Gaaagaataataattataagac---attacatacaaccctatggcaaccaacctgaaaatccagaga-------------------aaattgctgaattcctagaaaaacac-aaactgatatc-aaa----------------------------agagact i calJac3.chr15 I 307 C 0 s canFam3.chr34 24756150 166 - 42124431 atcatagaacaccagatataaaa--aaaggaaaagaattgtaaaacaatactacatataactctatgacaaccaacttgaaaatctagaga-------------------aaattgttgaattcctaggaaaatacaaaattgacaccaaaagaaacagaaaatttATTTATTTAtttttaaagatt i canFam3.chr34 C 0 I 180 a score=802670.000000 s hg38.chr3_KI270781v1_alt 17334 231 + 113034 GAAAATTTAAATAGGTCAGTTACCCAGGAAGAAATTGGAAAAGTAAAAGTAATGtaggaatagaaagacatttcttaaatatgatgaaaaatatttacc--agaagtcaatagcaaatatctttcttactaaaac-catgaaaccctcaagctatttccattaaattaggaaagtacaaagaagggatgcttaccatgatcattattattcaaca-tgttttaaaggctcaattg s panTro4.chr3 13767643 231 - 202329955 gaaaatttaaataggtcagttacccaggaagaaattggaAAAGTAAAagtaacgtaggaatagaaagacatttcttaaatatgatgaaaaatatttacc--agaagtcaatagcaaatatctttcttactaaaac-catgaaaccctcaaactatttccatcaaattaggaaagtacaaagaagggatgcttaccatgatcattattattcaaca-tgttttaaaggctcaattg i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523757 231 + 135191526 gaaaatttaaatagatcagttacccaggaagaaattggaaaagtaaAAGTAATGtaggaatagaaagacatttcttaaatatgatgaaaaatatttacc--agaagtcaatagcaaatatctttcttactaaaac-catgaaaccctcaaactatttccattaaattaggaaagtacaaagaagggatgcttaccatgatcattattattcaaca-tgttttaaaggctcaattg i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14305351 231 - 123690457 gaaaatttaaataggtcagttacctaggaagaaattggaAAAGTAAAAGTAATGtaggaatagaaagatatttcttaaatatgatgaaaaatatttacc--agaagtcaatagcaaacatctttcatactaaaac-catgaaaccctcaaactatttccattaaattaggaaagtacaaagaagggatgcttaccatgatcattattattcaaca-tgttttaaaggctcaattg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103590809 231 + 192599291 gaaaatttaaatagatcagttacccaggaagaaactggaaAAGTGAAAGTAATGtagaaatagaaagacatttcttaaatatgatgaaaaatatttacc--ggaagtcaatggctaatatcgttattactaaaac-cattaaaccctcaaactatttccattaaattaggaaagtacaaagaaaggatgcctaccatgatcactattattcaaca-tgttttaaaggctcaattg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103232163 231 - 192460366 gaaaatttaaatagATCAGTTACCCAGGAAGAAACTGGAAAAGTGAAAGTAATGtagaaatagaaagacatttcttaaatatgattaaaaatatttacc--ggaagtcaatggctaatatcgttattactaaaac-cattaaaccctcaaactatttccattaaattaggaaagtacaaagaaaggatgcctaccatgatcactattattcaaca-tgttttaaaggctcaattg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101028340 231 + 187378091 gaaaatttaAATAGATCAGTTACCCAGGAAGAAACTGGAAAAGTGAAAGTAATGTAGAAATAGAAAGACATTTCTTAaatatgatgaaaaatatttacC--GGAAGTCAATGGCAAATATCGTTATTACTAAAAC-CATTAAACCCTCAAACTATTTCCATTAAATTAGGAAAGTACAAAGAAAGGATGCTTACCATGATCACTATTATTCAACA-TGTTTTAAATGCTCAAttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4895896 231 + 91754291 gaaaatttaaatagatcagttacccaggaagaaactggaaAAGTGAAAGTAATGtagaaatagaaagacatttcttaaatatgatgaaaaatatttacc--ggaagtcaatggcaaatatcgttattactaaaac-cattaaaccctcaaactatttccattaaattaggaaagtacaaagaaaggatgcttaccatgatcactattattcaaca-tgttttaaatgctcagttg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373758 230 - 98464013 gaaaatttaaataggtcagttactcaagaagaaattggaAAAGTAAAAGTAATGtgggaatagaaagacatttcttaaatatga-aaaaaatatttacc--agaagtcaatagcaaatctctttcttactaaaac-catgacactctcaaactatttccattaaattaagaaagtacacagaagggatgcttaccatggtcattattatctgaca-tgttttaaaggctcaattg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24756496 227 - 42124431 GAAAATTTAAATAGATCAGTTACCACAGAAATGACTGGAAGAGTAAAGGTAATAtaggaatagacgggcacttcttaaatataataaagaatatttaccaaaaaaattaatagcagataac----ttactaaaacacgtaaagccctcaagctatttccattagaat---taagcacaagggttaaatgctcactataa-cattattatgcaacattattcgaaaggccccagtg i canFam3.chr34 I 180 I 42 a score=3529704.000000 s hg38.chr3_KI270781v1_alt 17565 1283 + 113034 cattattg---gggaaa-aaagaaagtataagaacgaattc-----------------------------------------taacagcagaaaaag-ttatatttacctgcagatactatgattatacatggagaagaacccaaaagactgcagtaaacattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaggaaataaacagagcagtgatgaagagtagctaggcaaagggcctcactccagacacagtggccaggaaaggatttcctccaggggagatcctgaagctagga-cccaggcaaggagaggaagagctccaagaacggcattccagccagagggaacagtgtgtgccagggtgggtttgaagaacagcaagaaggccactgggacagcagctagaagggaagagggtgttgtgagagaaagtggggtggtgtgggggctgtaggccagagtaaaaaggttgaacttgactctaaatgccataagaagacattgaaggactttagccagatttatgcttttttttttttt--------------------------------------------------------tttt-ttttttttttttgagatggagtctggctctgtcgcc-------gaggctggagtgcagtggcaggatcttggcttactgcaacctctacctcccaggttcaagcggttctcctgcctcagcctcccgagt-agctgcgattacaggtgcctgccaccacacttacctaa-ttttttgtattttttggtggagatggggtttcaccgtgttcgccaggatagtctcgaacccttgacctccggtgatccacccaccttggcctcccaaagtgctaggattacaggcgtgagccaccacgcccagcttcttatttatgtttttgaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggacgccaattagaaagctatagctatgggacaggtgggaagtcactgtggtgtgccttaggaagtggcaccggggCGAAGAAGACACACGGGTGGAAGTGAGCTGTATTTTAGAGTTAGGCCCCCAACTGGAGGGATGTACAGATGTTAGCCCTTTCCTGGTATATCCTCACTGACCTCTTTATTTTGAAACTCTAAATGTCACTTTGTTACAGCTATGTATCTTAGAAGCTAGGTAGATAGGCCGTTTTAGGCTTTTTACT--------------------------------------TTTTT-TTTTTT-AATAGGGGAGTTTAATCCGTCTGCAGTAATTTTGCTCTGTTCTGTGGTTTCTCCT-----TTTGTCCTTCCTTTC-TA-TTTTTAGTTACCATGGcttccctgccccttcctcttttgc s panTro4.chr3 13767874 1273 - 202329955 cattattg---gggaaa-aa-gaaagtataagaacgaattc-----------------------------------------taacagcagaaaaaaattatatttacctgcagatactatgattatacatggagaagaacccaaaagactgcagtaaacattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaggaaataaacagagcagtgatgaagagtagctaggcaaagggcctcactccagacacagtggccaggaaaggatttcctctaggggagatcctgaagctggga-tccaggcaaggagaggaagagctccaagaacggcattccagccagagggaacagtgtgtgccagggtgggtttgaagaacagcaagaaggccactgggacagcagctagaagggaagaggttggtgtgagagaaagtggggtggggtgggggctgtaggccagagtaaaaaggttgaacttgactctaaatgccataagaagacattgaaggactttagccagatttatgcttttttttttttt--------------------------------------------------------tttt-------------gagatggagtctggctctgtcgcc-------gaggctggagtgcagtggcaggatctcggcttactgcaacctctacctcccaggttcaagcggttctcctgcctcagcctcccgagt-agctgcgattacagttgcctgccaccacacttacctaa-ttttttgtattttttggtagagatggggtttcaccgtgttcgccaggatagtttcgaactcttgacctccggtgatccacccaccttggcctcccaaagtgctaggattacaggcgtgagccaccacgcccagcttcttatttatgtttttaaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggacgcccattagaaagctatagctatgggacaggtgggaagtcaccgtggtgtgccttaggaagtggcaccggggcgaagaagacacacgggtggaagtgagctgtattttagagttaggcccccagCTGGAGGGATGTACAGACGTTAGccctttcctggtatatcctcactgacctctttattttgaaactctaaatgtcactttgttacagctatgtatcttagaagctaggtagataggctgttttaggctttttact--------------------------------------ttttt-tttttttaataggggagtttaatccatctgcagtaattTTGCTCTGATCCGTGGTTTCTCCT-----TTTGTCCTTCCTTTCCTA-TTTTTAGTTACCATGGCTTCCCTGCCCCTTCCTCTTTTGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92523988 1269 + 135191526 cattattg---gggaaa-aaagaaagtataagaacgaattc-----------------------------------------taacagcagaaaaaa-ttatctttacctgcagatactatgattatacatggagaagaacccaaaagactgcagtaaacattctactagagaagacataaataagcaaataaataaacaagatattcac-gactgt-aaaaagtactctgcaggaaataaacagagcagtgatgaagagtagctaggcaaagggcctcactccaaacac--tggccaggaaaggatttcctccaggagagatcctgaagctagga-cccaggcaaggagaggaagagctccaagaacggcattccagccagagggaacagtgtgtgccagggcgggtttgaagaacagcaagaaggccactgggacagcagctagaagggaagagggtggtgtgagagaaagtggggtggggtgggggctgtaggccagtgtaaaaaggttgaacttgactctaaatgccataagaagatattgaaggactttagccagatttatgcttttttttttttt--------------------------------------------------------ttt--------------gagatggagtctggctctgtcgcc-------gaggctggagtgcagtggcacgatctccgcttactgcaacctctacctcccaggttcaagtgattctcctgcctcagcctcccgagt-agctgggattacagctgcctgccaccacacttatctaa-ttttttgtattttttggtagagatggggtttcactatgttggccaggatagtctcgaactcttgacctgtggtgatccacccacgttggcctcccaaagtgctaggattacaggcgtgagccaccacgcccagcttcttatttatgtttttaaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggacgccaattagaaagctatagttatgggacaggtgggaagtcaccgtggtgtgcctcaggaagtggcacaggggcgaagaagacacatgggtggaagtgagctgtattttggagctaggcccccaactggaGGGATGTACAGATGTTAGCCCtttcctggtatatcttcactgacctctttattttgaaactctaaatggcactttgttacagctgtgtatcttagaagctaggtagataggctgttgtaggttttttact--------------------------------------ttttt-tttttt-aataggggagtttaatccatctgcagtaattTTGCTCTGATCCGTGGTTTCTCCT-----TTTTTCCTTCCTTTCCTATTTTTTAGTTACTATGGCTTCCCTGCCCCTTCCTCTTTTGC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14305582 1282 - 123690457 cattatggagagggggg-gaagaaagtataagaatgaattc-----------------------------------------taacagcagaaaaaa-ttatctttgcctgcagatactatgattatacatggagaagaacccaaaagactgcagtaaacattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaggaaataaacagagcagcgatgaagagtagctaggcaaagggcctcactccagacacagtggccaggaaactatttcctccaggggagatcctgaagctagga-cccaggcaaggagaggaagagctccaagaacagcattccagccagagggaacagtgtgtgccagagtgcgtttgaagaacagcaagaaggccactgggacagcagctagaagagaagagggtggtgt----gaaagtggggtggggtgggggcagtaggccagagtaaaaaggttgaacttgactctaaatgccataagaagacattgaaggactttagccagatttatgctttttcttttctt--------------------------------------------------------tttttttttttttttttgagatggagtctggctctgtcatc-------gaggctggagtgcagtggcgtgatcttggctcactgcaacttctacctcccaggttcaagcgattctcctgcctcagcctcccgagtaaactgggattacaggtgcctgcaaccacacctatctaa--tttttgtattttttggtagagatggggtttcaccatgtcggccaggatagtctccaactcttgacctccgatgatccacccaccttggcctcccaaagtgctaggattacaggtgtgagccaccacgcccagcttcatatttatgtttttaaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggatgccaattagaaagctatagctatgggacaggtgggaagtcaccgtggtgtgccttagtaagtggcaccggggcaaagaagacagatgggttgaagtgagctgtattttggagctagacccccaactggaGGGATGTACAGATGTTAGCCTTTTCCTGGTATATCTTCACTGACCTCTTTATTTTGAAACTCTATATGTCACTTTGTTACAGCTATGTATCTTAGAAGCTAGGTAGATAGGCTGTTGTAGGCTTTTTACT--------------------------------------TTTTT-TTT----AATAGGGGAGTTTAATCCATCTGCAGTAATTTTGCTCTGATCCGTGGTTTCtcct-----tttttccttcctttccttttttttagttaccatggcttccctgccccttcctcttttgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103591040 1333 + 192599291 cattattg---gggaaa-aaagaaagtataagaacgaattc-----------------------------------------taacagcagaaaaaa-ttatctttacctgcagataatatgattatacatgtagaagaacccaaaagactgtagtaaaaattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaagaaataaacagagcagtgatcaagagtagctaggcaaagggcctcactccagacagagtggccaggaaagggtttaccccaggggagatcctgaagctagga-cccaagcaaggagaggaagagctccaaaaacggcattccagccagagggaacagtgtgtgccagggtgcgtctgaaaaacaccaagaaggccactgggacagcaactagaagggaagggggtggtgtgacagaa-----ggtggggtGGGGGCTGTAGGACAGAGTAAAAAGGTTGAACTTGACTCTAAATGCCATAAGACA--------------TAGTCGGATTTATGcttttctttcttttcttttcttttctttctttc-----------------tttctttctttttctttttctttt-ttttttttttttgagatggagtctcgctctgtcgcc-------gaggctggagtgcagtggcgcgatctcggctcactgcaacctctacgtcccaggttcaagcgattctcctgcatcagcctcctgagt-tgctgggattacagatgcctgccaccacacctggctaa--tttttgtattttttggtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaag---------tacaggcgtgagccaccacgctcAACTTCATatttatgtttttaaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggacgccaattataaagcgatagctatgggacaggggggaactcaccgtggtgtgccttaggaagtggcagcggggcgaagaagacacatgggtggaagtgagctgtgttttggagctagacccccagcgggaGGGATGCACAAATGTTAGCCCTTTCCTGGTATATCTTCACCGACCTCTTTATTTTGAAACTCTAAATGTCACTTTGTTACAGCTACGTATCTTAGAAACTAGGTAGATAGGTTGTTGTAGGCTTTTTACtgttttttgttttgttttgttttttgtttttgtttttgcttttg-tttttT-AATAGGGGAGTTTAATCCATCTGCAGTAATTTTGCTCTGATCCGTGGtttctctt-----ttttttcttcctttcctattttttagttaccataccttccctgccccttcctcttttgc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103232394 1318 - 192460366 cattattg---gggaaa-aaagaaagtataagaacgaattc-----------------------------------------taacagcagaaaaaa-ttatctttacctgcagataatatgattatacatgtagaagaacccaaaagactgtagtaaaaattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaagaaataaacagagcagtgatcaagagtagctaggcaaagggcctcactccagacagagtggccaggaaagggtttaccccaggggagatcctgaagctagga-cccaggcaaggagaggaagagctccaaaaacggcattccagccagagggaacagtgtgtgccagggtgcgtctgaaaaacaccaagaaggccactgggacagcaactagaagggaagggggtggtgtgacagaa-----ggtggggtGGGGGCTGTAGGACAGAGTAAAAAGGTTGAACTTGACTCTAAATGCCATAAGACA--------------TAGTCGGATTTATGcttttctttcttttcttttcttttctttctttc-----------------tttctttcttt---------tttt-ttttttttttttgagatggagtctcgctctgtcacc-------gaggctggagtgcagtggcgcgatctcggctcactgcaacctctacggcccaggttcaagcgattctcctgcatcagcctcctgagt-agctgggattacagatgcctgccaccacacctggctaa--tttttgtattttttggtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaag---------tacaggcgtgagccaccacgctcAACTTCATatttatgtttttaaaagaatattatatgtgctt------------------------tgtagggaggaaggcaaggggggctaaggacgccaattataaagcgatagctatgggacaggggggaactcaccgtggtgtgccttaggaagtggcagcggggcgaagaagacacatgggtggaagtgagctgtgttttggagctagacccCCAGCGGGAGGGATGCACAAATGTTAGCCCTTTCCTGGTATATCTTCACCGACCTCTTTATTTTGAAACTCTAAATGTCACTTTGTTACAGCTACGTATCTTAGAAACTAGGTAGATAGGttgttgtaggctttttactgttttttgttttgttttgttttttgtttttgt------ttttg-tttttt-aataggggagtttaatccatctgcagtaattttgctctgatccgtggtttctctt-----ttttttcttcctttcctattttttagttaccataccttccctgccccttcctcttttgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101028571 1261 + 187378091 catt-ttg---gggaaa-aaagaaagtataagaaCGAATTC-----------------------------------------TAACAGcagaaaaaa-ttatctttaccTGCAGATAATATGATTATACATGTAGAAGCACCCAAAAGACTGTAGTAAAAATTCTACTAGAGAAgacataaataagcaaataaataaacaagatattCACAGACTGTAAAAAAGTACTCTGCAAGAAATAAACAGAGCAGTGATCAAGAGTAGCTAGGCAAAGGGCCTCACTCCAGACAGAGTGGCCAGGAAAGGGTTTACTCCAGGGGAGATCCTGAAGCTAGGA-CCCAGGCAAGGAGAGGAAGAGCTCCAAAAACGGCATTCCAGCCAGAGGGAACAGTGTGTGCCAGGATGCGTTTGAAAAACACCAAGAAGGCCACTGGGACAGCAACTAGAAGGGAAGGGGGTGGTGTGACagaa-----ggtggggtgggggctgtagGACAGAGTAAAAAGGTTGAACTTGACTCTAAATGCCATAAGACA--------------TAGCCAgatttatgcttttctttctttt--------------------------------------------------------cttt-ttttctttttttgaaatggagtctcgctctgtcacc-------gaggctggagtgcagtggcgcgatctcggctcactgcaacctctacgtcccaggttcaagcgattctcctgcatcagcctcctgagt-agctgggattacagatgcctgccaccacacctggctaa--tttttgtattttttggtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgaccttaggtgatccacccaccttggcctcccaaag---------tacaggcgtgagccaccacgctcaacttcatatttatgtttttaaaagaatattatatgTGCTT------------------------TGTAGGGAGGAAGGCAAGGGGGGCTAAGGACGCCAATTATAAAGCGATAGCTATGGGACAGGGGGGAACTCACCGTGGTGTGCCTTAGGAAGTGGCAGCGGGGCGAAGAAG--ACATGGGTGGAAGTGAGCTGTGTTTTGGAGCTAGACCCCCAGCGGGAGGGAAGCACAAATGTTAGCCCTTTCCTGGTATATCTTCACCGACCTCTTTATTTTGAAACTCTAAATGTCACTTTGTTACAGCTACGTATCTTAGAAACTAGGTAGATAGGTTGTTGTAGgctttttactg-------------------------ttttgt------ttttg-tttttt-aatagggGAGTTTAATCTATCTGCAGTAATTTTGCTCTGATCcgtggtttctctt-----ttttttcttcctttcctattttttaGTTACCATACcttccctgccccttcctctttTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4896127 1355 + 91754291 cattattg---gggaaa-aaagaaagtataagaacgaattc-----------------------------------------taacagcagaaaaaa-ttatctttacctgcagataatatgattatacatgtagaagaacccaaaagactgtagtaaaaattctactagagaagacataaataagcaaataaataaacaagatattcacagactgt-aaaaagtactctgcaagaaataaacagagcagtgatcaagagtagctaggcaaagggcctcactccggacagagtggccaggaaagggtttactccagaggagatcctgaagctagga-cccaggcaaggagaggaagagctccaaaaacggcattccagccagagggaacagtgtgtgccagggtgcgtttgaaaaacaccaagaagaccactgggacagcagctagaagggaagggggtggtgtgacagaa-----ggtggggtGGGGGCTGTAGGCCAGAGTAAAAAGGTTGAACTTGACTCTAAATGCCATAAGACA--------------TAGCCAGATTTATGcttttctttcttttcttttcttttctttctttcctttttttttttttttttttttttttttttttttttttttt-ttttttttttttgagatggagtctcgctctgtcacc-------gaggctggagtgcagtggcgcgatctcggctcactgcaacctctacctcccaggttcaagcgattctcctgcatcagcctcctgagt-agctgggattacagatgcctgccaccacacctggctaa--tttttgtactttttggtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcctcccaaag---------tacaggcgtgagccaccacgcccAACTTCATATTTATGTTTTTTAAAGAATATTATATGTGCTTTGTAGGGAGGAAGGCAAGGGGGGCTGTAGGGAGGAAGGCAAGGGGGGCTAAGGACGCCAATTATAAAGCGATAGCTATGGGAC-GGGGGGAACTCACCGTGGTGTGCCTTAGGAAGTGGCACCGGGGCGAAGAAGACACATGGGTGGAAGTGAGCTGTGTTTTGGAGCTAGACCCCCAGCGGGAGGGATGCACAAATGTTAGCCCTTTCCTGGTATATCTTCACCGACCTCTTTATTTTGAAACTCTAAATGTCACTTTGTTACAGCTACGTATCTTAGAAACTAGGTAGATAGGTTGTTGTAGGCTTTTTACTGtttt-------------gtttttgtttttgt------ttttgtttttTT-AATAGGGGAGTTTAATCCATCTGCAGTAATTTTGCTCTGATCCGTGGTTTCTCTT-----TTTTTTCTTCCCTTCCTATTTTTTAGTTACCATACcttccctgccccttcctcttttgc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92373988 1292 - 98464013 cattattg---ggggggcaaagaaagtataagaatgaattctatgcattctgaaggctgataaaaaagaaaagaatgaattttaacagcagaaaaaa-ttacctttccctgcagataatacgattatacacagagaagaacccaaaagactgtagtaaaaattctactggagaagatataaataagc-aatacataaacaaaatattcacagattgt-aaaaagtactctgcaggaaaaaaacagagcagtgatcaagagtagcta-gcaaagggcctcactccagacagactggccagggaagggtcttctgcag-ggagatcctgaagccaggaccccaggcaaggagaggaagaactccagaaatggcatgccagccagagggaacactgtgtgccaggatgggtttgaagaacagcaagaaggccact-ggacagcagttaggagggaaggaggtggtgtgagagaa-----ggtggggtgggggccgtgggccagagttagaaggttgaacttgactctaaatgccataagaagaccttgaaggact-tagccagatttatgcttttttgtgtgtg--------------------------------------------------------tgtg------------tgagatggagtcttgctctgtcacaagagctggggtctggagtgcagcggcatgatctcggctcactgcaacctccgcatcccagattcaagcaattctcctccctcagcctcccgagt-agctgggattacaggtgcctgccaccacatctggctaatttttttttatttttttgtagagatggggtttcgccatgttggccaggctggtcttga---------------------acccaccttggtctcccaaagtgctggaattacaggtgtgagccacctcgtccagcttcagatttatatttttaaacgaatattatgtctgttc------------------------tgaagggaggaaggcaaggggcgctacggacgccaattagaaagctaaagctatggtccaggtgggaagtcaccgaagtgtgccttaggaagtggcacgggg----agAAGACGCATGGGTGGAA-TGAGCCGTG--TTGGAGCTAGACCCGCAGCCGGAGGAATATACAGGCATTAGCCCTTTCGTGCTGTATCTTCACCGACCTCTTTATTCTGAAACTCTAAATGTCACTTTGTTTCAGCTATGTATCTTAGAAACTAGGTAGATAGGTTGTTGTAGACTTTTTAGT--------------------------------------TTTTT-TTTTTT-AATAGGGAAGATTAATCCAACTGCAGTAATTAAGCTCTGATCCGTGGTGTTTTTTGTTTGTTTGTTTCTTTTTTCCTATTTTTTGCTTACCGTGACTTCCCTCCCCCTTCCTCTTTTGC i calJac3.chr15 C 0 C 0 e canFam3.chr34 24756723 42 - 42124431 I a score=465467.000000 s hg38.chr3_KI270781v1_alt 18848 143 + 113034 ttccccttgccttggtcttttgttcctgattcctGAAGGACTGTTGGAGTTTTCCCGGTCTCGTCTTTCTTAACGCTCTAAGGGTTTGGAAGTTTAACGTCCTATCTCTA--CTCCGGGTC--TAGTGACCGTTCAGGGTCTTAAGA s panTro4.chr3 13769147 143 - 202329955 TTCCCCTTGCCTTGGTCTTTTGTTCCTGATTCCTGAAGGACTGTTGGAGTTTTCCCGGTCTCGTCTTTCGTAACGCTCTAAGGGTTTGGAAGTTTAACGTCCTATCTCTA--CTCCGGGTC--TAGTGACCGTTCAGGGTCTTAAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92525257 143 + 135191526 TTCCCCTTGCCTTGGTCTTTTGTTCCTGATTCCTGAAGGACTGTTGGGTTTTTCCCGGTCTCGTCTTTCGTAACACTCTAAGGATTTGGAAGTTTAACGTCCTATCTCTA--CTCCGGGTC--TAGTGACCGTTCAAGGTCTTAAGA i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14306864 143 - 123690457 ttccccttgccttGGTCTTTTGTTCCTGATTCCTGAAGGACTCTTGGAGTTTTCCCGGTCTCTTCTTTCGTAACTCTCTCAGGGTTTGGAAGTTTAACGTCCTATCTCTA--CTCCGGGTC--TAGTGACTGTTCAGGGTCTTAAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103592373 139 + 192599291 ttccccttgccttGGTCTTTTGTTCCTGATTCCTGAAGGACTGTTGGAGTTTCCCCGGTCTCTTCTTTCGTAGCGCTCTAAGGGTTTGGAAGCTTAACGTCCTATCTCTA--CTCCAGGTC--TAGT----GTTCAGGGTCTTAAGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103233712 139 - 192460366 ttccccttgccttggtcttttgttcctgattcctgaaggactgttggagtttccccggtctcttctttcgtagcgctctaagggtttggaagcttaacgtcctatctcta--ctccaggtc--tagt----gttcagggtcttaaga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101029832 139 + 187378091 TTCCCCTTGCCTTGGTCTTTTGTTCCTGATTCCTGAAGGACTGCTGGAGTTTCCCCAGTCTCTTCTTTCGTAGCGCTCTAAGGGTTTGGAAGCTTAACGTCCTATCTCTA--CTCCAGGTC--TAGC----GTTCAGGGTCTTAAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4897482 138 + 91754291 ttccccttgccttggtcttttgttcctgattcct-AAGGGCTGTTGGAGTTTCCCCGGTCTCTTCTTTCGTAGCGCTCTAAGGGTTTGGAAGCTTAACGTCCTATCTCTA--CTCCAGGTC--TAGT----GTTCAGGGTCTTAAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92375280 142 - 98464013 TTCCCTTTGCCTCGGTCTTTTGTTCCTGATTCCTGAACAACTGTTAGAGTTTTCCAAGTCTC-TCTTTTGCAAGGCTCTAAGCGTTTACAAGGTTAACGTCCTGTCTGCG--CTCAGGGTC--TAGTAACTGTTCAGGATCTTAAGG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24756765 147 - 42124431 TTCCTTTCCCCTTGGTCTTTTGTTCCTGATGCTTGAAGGACTGTTTGAGTCTTGTTGGTTTCTTTCTTTTTAAAGCTCTCATGATTTGGAAGTTTAACATTCTGTTTCCAGTCTTCTGGTCTATAGTACCTGTTCAGGGCCTCAGGA i canFam3.chr34 I 42 I 219 a score=1193256.000000 s hg38.chr3_KI270781v1_alt 18991 387 + 113034 CATTTTCAGTGCTAGCCCGTGCGTCTTTGTTT-------------CCCCATCTT--------TCTTTAGTTCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGTGAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAGTGAAGAGTGGATGGTGCCAATTCTAGCTGggaggagtgaaggacggggagggggac--gatgaggcaggaggagACCACGCCGCCCTCCTGGGAGGGGGCTGACTC-GACCCAGCTGGTTCGGGTG-TGCACCATCCTCACTCTCTCCGC-----------------CCTTCCAGGGCTGCACTGCGCCCCGCTCTCGGCAAGACACGGGTGA-------CGCTCCGGA--GATTTAATTCCCCTGCTC s panTro4.chr3 13769290 387 - 202329955 CATTTTCAGTGCTAGCCTGTGCGTCTTTGTTT-------------CCCCATCTT--------TCTTTAGTTCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGTGAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAGTGAAGAGTGGATGGTGCCAATTCTAGCTGGGAGGAGTGAAGGACAGGGAGGGGGAC--GATGAGGCAGGAGGAGACCACGCCGCCCTCCTGGGAGGGGGCTGACTC-GACCCAGCTGGTTCGGGTG-TGCACCATCCTCACTCTCTCCGC-----------------CCTTCCAGGGCTGCACTGCGCCCCGCTCTCGGCAAGACACAGGTGA-------GGCTCCGGA--GATTTCATTCCCCTGCTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92525400 387 + 135191526 CATTTTCAGTGCTAGCCTGTGCGTCTTTGTTT-------------CCCCATCTT--------TCTTTAGTTCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGTAAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGGATGGTGCCAATTCTAGCTGGGAGGAGTGAAGGACAGGGAGGGGGGC--GATGAGGCAGGAGGAGACCACGCCGCCCTCCTGGGAGGGGGCTGACTC-GACCCAGCTGGTTCGGGTG-TGCACCATCCTCACTCTCTCCGC-----------------CCTTCCAGGGCTACACTGCGCCCTGCTCTCGGCAAGACACGAGTGA-------GGCTCCGGG--GATTTAATTCCCCTGCTC i ponAbe2.chr9 C 0 C 0 s nomLeu3.chr11 14307007 383 - 123690457 CATTTTCACTGCTAGCCTGTGCGTCTTTTTTT-------------CCCCGTCTT--------TCTTTAGTTCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGTGAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGAATGGTGCCAATTCTAGCTGGAAGGCGTGAAGGACAGGGAGGGGGG---GAT-CCTCTAGAGTCGACC-TGCCGCCGTCCTGAGAGGGGGCTGATTC-GACCCGGCTGGTTCGGGTG-TGCACCATCCTCACTGTCTCCGC-----------------CCTTCCAGGGCTACACTGCGCCCCGCTCTCGGCAAGGCACGGGTGA--------GCTCCGGG--GATTTAATTCCCCTGCTC i nomLeu3.chr11 C 0 I 2332 s rheMac3.chr2 103592512 387 + 192599291 CATTTTCAGTGCTAGCCTGTGCGTCTTTCCTT-------------CCCCATCTT--------TTTTTAGTCCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGCGAAGCTGCCTGGCGCATAGATGTCTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGGATGGTGCCAATTCTAGCTGGAAGGAGTGAAGGACAGGGAGAGGGGC--GATGAGGCAGGAGAAGACCACGCCGCCCTCCTGGGCGGGGGCTGACTC-GATCCAGCTGGTTCGGGTG-TGTACCATCCTCACTCTCTCCGT-----------------ACTTCCAGGGCTACACTGCGCCCAGCTCTCGGCAAGACACGGGTGA-------GGCTCCCGG--GATTTAATTCCCCCGCTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103233851 387 - 192460366 cattttcaatgcTAGCCTGTGCGTCTTTCCTT-------------CCCCATCTT--------TTTTTAGTCCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGCGAAGCTGCCTGGCGCATAGATGTGTTCAAATCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGGATGGTGCCAATTCTAGCTGGAAGGAGTGAAGGACAGGGAGAGGGGC--GATGAGGCAGGAGAAGACCACGCCGCCCTCCTGGGCGGGGGCTGACTC-GATCCAGCTGGTTCGGGTG-TGTACCATCCTCACTCTCTCCGT-----------------ACTTCCAGGGCTACACTGCGCCCAGCTCTCGGCAAGACACGGGTGA-------GGCTCCCGG--GATTTAATTCCCCCGCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101029971 387 + 187378091 CATTTTCAGTGCTAGCCTGTGCGTCTTTCCTT-------------CCCCATCtt--------tttttAGTCCCCTTGTAAGCCTTTGTGATCACTTCAAATCCTTTTTAGAAAT----AGTTTCCAGATGAAGAAGCGAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGGATGGTGCCAATTCTAGCTGGAAGGAGTGAAGGACAGGGAGAGGGGC--gatgaggcaggagaagaccACGCCGCCCTCCTGGGCGGGGGTTGACTC-GATGCAGCTGGTTCGAGTG-TGTACCATCCTCACTCTCTCCGT-----------------ACTTCCAGGGCTACACTGCGCCCAGCTCTCGGCAAGACACGGATGA-------GTCTCCTGG--GATTTAATTCCCCCGCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4897620 386 + 91754291 CATTTTCAGTGCTAGCCTGTGCGTCTTTCCTT-------------CCCCATCTT--------TTTTTAGTCCGCTTGTAAGCCTTT-TGATCACTTCAAATCCTTTTTAGAAAT----AGCTTCCAGATGAAGAAGCGAAGCTGCCTGGCGCATAGATGTGTTCAAGTCTCCCTTCTTTTCGCTCAAGGAGAATGAAGAGTGGATGGTGCCAATTCTAGCTGGAAGGAGTGAAGGACAGGGAAGGGGGC--GATGAGGCAGGAGGAGACCACGCCGCCCTCCTGGGCGGGGACTGACTC-GATCCAGCTGGTTCGGGTG-TGTACCATCCTCACTCTCTCCGT-----------------ACTTCCAGGGCTACACTGCGCCCAGCTCTCGGCAAGACACGGGTGA-------GGCTCCCGG--GATTTAATTCCCCCGCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92375422 360 - 98464013 CATTTTCAGTGCTAGCCTGTGCGTCTTTGCTT-------------CCCTGTC------------TTTAGTTCCCTTGTAAGCCTCTGTGATCACTTCAGATCCTTTGTGGAAAT----AGCTTCCAGATGAATAAGTGAGGCTTCCTGGCACGTGGATGTGCTCATGTCTCCCTTCTTGTCGCTCAAGGAGAATGCGGAGTGGGTGGTGCCAATTCCAGCTGGGAGGAGTGAAGGACAGGGAGGGGGAC--GATGAGGCAGGAGGAGACCACGCCGCCCTCCTTGGCGGGG-CTGACTG-GACCCGACTGCTTCGGGTG-TGCACCAGCCTCAC--TCTCCAG-----------------CTCTCCAGGTCTACACTGCGCCCGGCTCTCTGCAA-----------------------------GATTTAATTCCCACGTTC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24757131 413 - 42124431 CATTTTAAGTATTAACCT-CACCCCTCTGTTTACCCACCGCAACCCCCCATCCTTTTTCCTGTTTTTAACATCCT--CAGATCTTCCTGATCACTTCAAATCCTTT-TAGAAGTAGTGAGTTTCCACATGACTAAGTGAACTTGCCCAGTACATAGATA--CTCATTTCTCC---CTTTTCCCTCAAGAACAGTGAAG-------------------ACCTGAGAGGAGTTGAGGCCAGCGTGGGGGACAGGGGACAGCAGGAGGAGGCCTC-CGGCCTTCCTGGGTCCGAGCTGACTCAGACCCGGCTCACTCGAGGGCTGTGCCATCCCCACCGTCCCAGCCAGCCCCGGTCCGCACACCCCCCGGGGGGACACTGCTCCCAGCTCCCTGCAGGCCGGggtcgctctaggtcgctctaggtcgctctaggtcCTTTGCAC i canFam3.chr34 I 219 C 0 a score=393299.000000 s hg38.chr3_KI270781v1_alt 19378 163 + 113034 --AGGTCAGTGTAGGGCCTCAG-------GGAAGTTCAAAGCTCGCCCACTAGAGGGCATTGGCGCGTTTCCCAGAAGACACGGCCCCGGGAGCTTTCGGGCT--CTCCAGCAGCCCAGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCTGGGGCTGCTGGC s panTro4.chr3 13769677 163 - 202329955 --AGGTCAGTGTAGGGCCTCAG-------GGAAGTTCAAAGCTCGCCCACTAGAGGGCATTGGCGCGTTTCCCAGAAGACACGGCCCCGGGAGCTTTCGGGCT--CTTCAGCAGCCCAGGTGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCTGGGGCTGCTGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92525787 163 + 135191526 --AGGTCAGTGTAGGGCCTCAG-------GGAAGTTCAAAGCTCCCCAACTAGAGAGCATTGGCGCGTTTCCCAGAAGACACGGCCCCGGGAGCTTTCGGGCT--CTCCAGCAGCCCAGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCGCGGCCTGCTGGC i ponAbe2.chr9 C 0 C 0 s rheMac3.chr2 103592899 163 + 192599291 --AGGTCAGCGTAGGGTCTCAG-------GGAAGTTCAAAGTTCGCCCACTAGAGGGCATTGGCGCCTTTCCCAGAAGACACGGCCCCGGTTGCTTTCGGGCT--CTCCAGCCTCCCCGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCGGGGGCTGCTGGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103234238 163 - 192460366 --AGGTCAGCGTAGGGTCTCAG-------GGAAGTTCAAAGTTCGCCCACTAGAGGGCATTGGCGCCTTTCCCAGAAGACACGGCCCCGGTTGCTTTCGGGCT--CTCCAGCCTCCCCGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCGGGGGCTGCTGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101030358 163 + 187378091 --AGGTCAGCGTAGGGTCTCAG-------GGAAGTTCAAAGTTCGCCCACTAGAGGGCATTGGCGCCTTTCCCAGAAGACACGGCCCCGGTTGCTTTCGGGCT--CTCCAGCCTCCCCGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCGGGGGCTGCTGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4898006 163 + 91754291 --AGGTCAGCGTAGGGTCTCAG-------GGAAGTTCAAAGTTCGCCCACTAGAGGGCATTGGCGCCTTTCCCAGAAGACACGGCCCCGGTTGCTTTCGGGCT--CTCCAGCCTCCCCGGGGGACTCCGGCGTCCGCGTAGACTGGTTCTGCGCAGGGGGCGGGGGCTGCTGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92375782 143 - 98464013 --------------------AG-------GGAAGTTCAACGCTTGCCCACTAGAGGGCACTGGCGCGTTTCCCAGAAGGCAGGGCCCGGG--GATTCCGGGCG--CTCAGCCAGCCCCGGGGGGCTCCGGCGTCCGCTTAGACGGGTTCTGCGCAGGGGGCGGCGGCTGCAGGC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24757544 171 - 42124431 CTTGGTCCCCGCAGAGCCGCGGGACCTCAGGAGGCCCCGAGCTCGGCCACTAGGGGGCACCGGCGCGCTTCCTCGAGGAGACCGTCCCGGGAGCGTCAGGGCTGGCACCGGCCGCTGCACAG---TCGCACGTCGGCTGGGACGGGCTCCGGGCCAGGTGCGGGACATGCAGGC i canFam3.chr34 C 0 I 4 e nomLeu3.chr11 14307390 2332 - 123690457 I a score=53528.000000 s hg38.chr3_KI270781v1_alt 19541 26 + 113034 GAAGGAGGTCGGGCGCTGC---AGAGGAG s panTro4.chr3 13769840 26 - 202329955 GAAGGAGGTCGGGCGCTGC---AGAGGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92525950 26 + 135191526 GAAGGAGGTCGGGCGCTGC---AGAGGAG i ponAbe2.chr9 C 0 C 0 s rheMac3.chr2 103593062 29 + 192599291 GAAGGAGGCTGGGCGCTGCCCTCCAGGAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103234401 29 - 192460366 GAAGGAGGCTGGGCGCTGCCCTCCAGGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101030521 29 + 187378091 GAAGGAGGCTGGGCGCTGCCCTCCGGGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4898169 29 + 91754291 GAAGGAGGCCGGGCGCTGCTCTCCAGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92375925 29 - 98464013 GAAGGAAGCTGGGCGCTGCTCTCCAGGAG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24757715 4 - 42124431 I e nomLeu3.chr11 14307390 2332 - 123690457 I a score=635230.000000 s hg38.chr3_KI270781v1_alt 19567 373 + 113034 CTCATAGACCCTACAGCGCAGTCAGGGTCGGGGAGGCCGCTGATTCTCCCGCTTC-AGGGCGTTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGACTCTGGAGACCCGAG-----------TGTGTGCGGGAGG---CCAGCCCCGCCGAAGCGCCGTCCAGGATCTGCCGAAGCGCCGTCCGGGATCTGCCGAAGCGCCATCCAGGATCTGCCGAAGCGCCATCCAGGATCTGCCGAAGCGCCGCCC---------------------------------------------GGGATCTGCCGCCGCACGCAAGAGCCCAACCATAGAGGACAGCGGGGGCACCTAGTACCCGTGGAGATCCCAAACTC----CTCTCACCCCAGCCCCAAAGCACTTCTCCCAATGCTGCTGCCGTGCCTGAATCCCG s panTro4.chr3 13769866 329 - 202329955 CTCATAGACCCTACAGCGCAGCCAGGGTCGGGAAGGCCGCTGATTCTCCCTCTTC-AGGGCGTTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGCCTCTGGAGACCCGAG-----------TGTGTGCAGGAGG---CCAGCCCCGCCGAAGCGCCGTCCAGGAGCTGCCGAAGCGCCTTCC--------------------------------------------AGGATCTGCCGAAGCGCCGTCC---------------------------------------------GGGATCTGCCGCCGCACGCAAGAGCCCAACCATAGAGGACAGCGGGGGCACCTACTACCCGTGGAGATCCCAAACTC----CTCTCACCCCAGCCCCAAAGCACTTCTCCCAATGCTGCTGCCGTGCCTGAATCCCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92525976 307 + 135191526 CTCATAGACCCTACAGCGCAGCCAGGGTCGGGGAGGCCGCTGATTCTCCCGCTTCGGGGGCGTTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGCCTCTGGAGACCCGAG-----------TGTGTGCGGGAGG---CCAGCCCCGCCGAAGCGCCGTCC------------------------------------------------------------------AGGATCTGCCGAAGCGCCGTCC---------------------------------------------GGGATCTGCCGCCGCACGCTAGAGCCCAACCATGTAGGACAGCGGGGGCACCTAGTACCCATGGAGATCCCAAACTC----CTTCCA-CCCAGCCCCAAAGCACTTCCTCCAATGCTGCCGCTATGCCTGAATCCCG i ponAbe2.chr9 C 0 C 0 s rheMac3.chr2 103593091 284 + 192599291 CTCACAGACCCTACAGCGCAGCCAGGATAGGGGAGGCCGCCGATTCTCCCACTTC-AGGGCGCTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGCCTCTGGAGACCCGAG-----------TGCCTGTGGGAGG---CCAGCCCCGCCGAAGCGCCGTCC-------------------------------------------------------------------------------------------------------------------------------------GGGATCTGCAGCCTCACGCAAGAGCCCTACCATGGAGGACAGCGGAGGCACCTGATACCCATGGAGACCCCAGACTC----CTCTTACCCCAG-CTCAAAGCACTTCTCCCATTGCTGCCGCCATGCCTGAATCCCG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103234430 284 - 192460366 CTCACAGACCCTACAGCGCAGCCAGGATAGGGGAGGCCGCCGATTCTCCCACTTC-AGGGCGCTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGCCTCTGGAGACCCGAG-----------TGCCTGTGGGAGG---CCAGCCCCGCCGAAGCGCCGTCC-------------------------------------------------------------------------------------------------------------------------------------GGGATCTGCATCCTCACGCAAGAGCCCTACCATGGAGGACAGCGGAGGCACCTGATACCCATGGAGACCCCAGACTC----CTCTTACCCCAG-CTCAAAGCACTTCTCCCATTGCTGCCGCCATGCCTGAATCCCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101030550 284 + 187378091 CTCACAGACCCTACAGCGCAGCCAGGATAGGGGAGGCCGCCGATTCTCCCGCTTC-AGGGCGCTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCACACCCGCCTCTGGAGACCCGAG-----------TGCCTGTGGGAGG---CCAGCCCCGCCGAAGCGCCGTCC-------------------------------------------------------------------------------------------------------------------------------------GGGATCTGCAGCCTCACGCAAGAGCCCTACCATGGAGGACAGCGGGGGCACCTGATACCCATGGAGACCCCAGACTC----CTCTTACCCCAG-CTCAAAGCACTTCTCCCAATGCTGCCGCCATGCCTGAATCCCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4898198 284 + 91754291 CTCACAGACCCTACAGCGCAGCCAGGGTAGGGGAGGCCGCCGATTCTCCCGCTTC-AGGGCGCTCAACTGCAGGA--CGAAGCGTCCCCAACGCGCGCACGCGCCTCTGGAGACCCGAG-----------TGCCTGTGGGAGG---CCAGCCCCGCCGAAGCGCCGTCC-------------------------------------------------------------------------------------------------------------------------------------GGGATCTGCAGCCTCACGCAAGAACCCTACCAAGGAGGACAGCGGGGGCACCTGATACCCATGGAGACCCCAAACTC----CTCTTACCCCAG-CTCAAAGCACTTCTCCCAATGCTGCCGCCATGCCTGAATCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92375954 418 - 98464013 CTCGGAGACCCTACAACCCAGCCAGGGTGGGGGAGGCCGCCGATTCTCCCGCTTC-AGGGCGCTCCATTGCAAGA--CGAAGTGCCCCCAACACTCACACCCGCCTCTAGAGACGCGAG-----------GGTCTGCGGGAGG---CCAGCGCCACCGAAGCGCCGCCCGGGATCCGCCAAAGCACCGTCCGGGATCCGCCGAAGCTCCGTCCGGGATCCGCCAAAGCCCCGCCCGGGATCCGCCAAAGCACCGTCCGGGATCCGCCGAAGCCCCGCCCGGGATCCGCCGAAGCGCAGTAAGAGGATCTGCCGCAGCACGCAAGAGCCCTACGATGGAGGACAGCGGGGGCACCTACTACCCATGGAGACCCCAAACTC----CTCTCACCCCAGCCCCAAAGTACTTCTCCCAACGCTGCCGCCATGCCTGAGTCCCG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24757719 268 - 42124431 ccccccgcccccacggcccggccggcgcgggA--------------------TGC-AGG---------TGCAGCATCTGCACCCCCCCCCATCCACGCCCCCACCTGCGAGGTCCTGGAgcgggcggccccgcgggcgggAGGGACCCAGAGCGGAAGCTGCGCGGTTA-------------------------------------------------------------------------------------------------------------------------------------GAGACCCG-AGCCTCAGCCCTGGGCGC------GCGGGACCGCGGGGGCTCCCGGTTCGGTTCGAGACCACAAACTCCCGACCCTCACCCCAG-CCAGGAGCCGTTATCTCAACCCTGCCGCCGTGCCTGAATCTCT i canFam3.chr34 I 4 C 0 e nomLeu3.chr11 14307390 2332 - 123690457 I a score=74080.000000 s hg38.chr3_KI270781v1_alt 19940 26 + 113034 CCCACGCGTGAGAATCACCCCA-TTAT s panTro4.chr3 13770195 26 - 202329955 CCCACGCGTGAGAATCACTCCA-TTAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr9 92526283 25 + 135191526 CCCACGCGTGAG-ATCACTCCA-TTAT i ponAbe2.chr9 C 0 N 0 s nomLeu3.chr11 14309722 26 - 123690457 CCCGCGCATGAGAATCACTCCA-TTAT i nomLeu3.chr11 I 2332 C 0 s rheMac3.chr2 103593375 26 + 192599291 CCTACCCATGAGAATCACTCCG-TTAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103234714 26 - 192460366 CCTACCCATGAGAATCACTCCG-TTAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101030834 26 + 187378091 CCTACCCATGAGAATCACTCCG-TTAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4898482 26 + 91754291 CCTACCCATGAGAATCACTCCG-TTAT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92376372 26 - 98464013 CCCACCCCTGAGAATCACTCCA-TTAT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24757987 23 - 42124431 ----ACCGTTGGAATCCCTCCATTTAT i canFam3.chr34 C 0 C 0 a score=2115181.000000 s hg38.chr3_KI270781v1_alt 19966 896 + 113034 TACAGAAGACCCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACGACTCAGTCATCCTTTAGGACTCGGTGATACATTAGCACAGATGAACCTGGCACTGAGGTGGGA------TGAGGTGGGGAGATCTTTTGGCCGCAGGTCATTTAGGATAT---TGTTATTACTGCAAAGACCACA-GAACAGCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTCTCATTGTCTCTTTTAAT-AAACAATATTTTGAgatcactttgttatagtgatgtctgctg-gtttccccactgtaaaatgactagttttccctttgtaattaataaatatttgggg-ggagatgctttgagactgtgacgtattctgtttcttctcaaactcttcccctctCCTCTCC------------------GCCCCACGTTTCTTGATCTCCTCTCTCTGCCTCTGGAGCACCGCTACATGCTGCCATTGATGGTTTGGGCACTTGGCTCG---------------------------------------------------------------CCTC-ACCTTGG---------------------------------------------------------CTACTTTC------------------CTCTCCCTCTCCCCTGGTCGGCCCTTCCTTGGTAGCTCC---TCTGTTGAATTCCCACATCCTTCGAACTCTGCAGGTAGAATCCCTTACATTTTCCTGGGAATGACCTAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTTCACTTCCACACTCATCCTCTCTTCCTTGCATCCTATCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGCTCTGgaagcag-ctggtagagtggaaagggcacaggctttggagtaagtc-agaccagattttgatcccactg-ccaccacttactagcta-----tatgaccAAGATTTTTTCTCTCTCTCTCTTTAGAA---------CATCAATTAACAT---AAGGATATTTGAATAGAAATACTCATCGTTAACG s panTro4.chr3 13770221 896 - 202329955 TACAGAAGACCCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACGACTCAGTCATCCTTTAGGACTCGGTGACACATTAGCACAGATGAACCTGGCACTGAGGTGGGA------TGAGGTGGGGGGATCTTTTGGCCGCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGACCACA-GAACATCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTCTCATTGTCTCTTTTAAT-AAACAATATTTTGAgatcactttgttatagtgatgtctgctg-gtttccccactgtaaaatgactagttttccctttgtaattaataaatatttggga-ggagatgctctgagactgtgacgtattctgtttcttctcaaactcttccccTCCCCTCTCC------------------GCCCCACGTTTCTTGATCTCCTCTCTCTGCCTCTGGAGCACCGCTACATGCTGCCATTGATGGTTTGGGCACTTGGCTGG---------------------------------------------------------------CCTC-ACCTTGG---------------------------------------------------------CTCCTTTC------------------CTCTCCCTCTCCCCTGGTCGGCCCTTCCTTGGTAGCTCC---TCTGTTGAATTCCCACATCCTTCGAACTCTGCAGGTAGAATCCCTTACATTTTCCTGGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTTCACTTCCACACTCATCCTCTCTTCCTTGCATGCTATCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGCTGTGgaagcag-ctggtagagtggaaagggcacaggctttggagtaagtc-agacctgattttgatcccactg-ccaccacttactagcta-----tatgaccaagattttttttctctctctctttagaa---------catcaattaacat---aaggatatttgaatagaaatacccatcgttaacg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14309748 870 - 123690457 TACAGAAG-------------------------ACTACGT--GTTACCCAAGGACGACTCAGTTATCCTTTAGGATTCGGTGACACATTAGCACAGATGAACCTGGCACTGAAGTGGGA------TGAGGTGGGGAGATCTTTTGGCTGCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGATCACAGGAACAGCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTCTCATTGTCTCTTTTAAT-AAACAGTATTTTGAgatcactttgttatagtgatgtctgctg-gtttccccactatgaaatgactagtttcccctttgtaattaataaatatttgggg-ggagatgctctgagactgtgacgtattctgtttcttctcaaactCCTCCCCTCCCACCTCC-------------------CCCCACGTTTCTTGATCTCCTCTCTCTGCCTCTGGAGCACCGCTACATGCTGCCTTTGATGGTTTGGGCACTTGGCTCA---------------------------------------------------------------CCTC-ACCTTGG---------------------------------------------------------CTACTTTC------------------CTCTCCCTCTCCCCTGGTCGGCACTTCCTTGGCAGCTCC---TCTGTTGAATTCCCACATCCTTCGAACTCTGCAGGTAGAATCCCTTACATTTTCCTAGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTTCACTTCCACACTCATCCTCTTTTCCTTGCATCCTATCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGCTCTGgaagcag-ctggtagagtggaaagggcacaggctttggagtaagtc-agacctgattttgatcccactg-ccaccacttactagcta-----taagaccGAGATTTTTTCTCTCTCTCTCTTTAGAA---------CATCAATTAACAT---AAGGATATTTGAATAGAAATACTCATAA-CAACG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103593401 870 + 192599291 TACAGAAGACTCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACTACTCAGTCATCCTTTAGGACTCCGCGACACGTTAGCACAGATGGACCTGGCACTGCGGTGGGA------TGAGGTGGGGAGATCTTTTGGCTTCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGACCACAGGAACAGCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTGTCAT--TCTCTTTTAATAAAACAATA-TTTGAgatcactttgttatagtgatgtctgctg-atttccccactataaaatgactagtttcccctttgtaat---taaatatttggg--ggagatgctctgagacggtgacatcttctgtttcttctcaaactcctcccctccctcctcccctctcccctccccctcatcctcACATTTCTCGATCTCCTCTCTCTGCCTCTGGAGCACCGCTACATGCTGGCATTGATGGTTTGGGCACTTGGCTCA---------------------------------------------------------------CCTCAACCTCGG---------------------------------------------------------CTACCTTC------------------CTCTCCCTCTCCCCTCGTCGGCTCTTCCTTGGTAGTTTCTTTTCTGTTGAATTCCCACATCCTTCGAACTCTGCAGGTAGAATCCCTTTCATTTTCCCGGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTCCAATTCCACACTCATCCTCTCTTCCTTCCATCCTGTCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGTtctggaagcag--------------------------------------------ctgattttgatcccaatg-ccaccacttattagcta-----taagg-caagattttctctctctctctctttagaa---------catcaattaacat---aaggatatttgaatagaaatactcattgttaagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103234740 870 - 192460366 TACAGAAGACTCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACTACTCAGTCATCCTTTAGGACTCCGCGACACGTTAGCACAGATGGACCTGGCACTGCGGTGGGA------TGAGGTGGGGAGATCTTTTGGCTTCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGACCACAGGAACAGCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTCTCAT--TCTCTTTTAATAAAACAATA-TTTGAgatcactttgttatagtgatgtctgctg-atttccccactataaaatgactagtttcccctttgtaat---taaatatttggg--ggagatgctctgagactgtgacatcttctgtttcttctcaaactcctcccctccctcctcccctctcccctccccctcatcctcacatttctcgatctcctctctctgcctctGGAGCACCGCTACATGCTGGCATTGATGGTTTGGGCACTTGGCTCA---------------------------------------------------------------CCTCAACCTCGG---------------------------------------------------------CTACTTTC------------------CTCTCCCTCTCCCCTCGTCGGCTCTTCCTTGGTAGCTTCTTTTCTGTTGAATTCCCACATCCTTCGAACTCTGCAGGTAGAATCCCTTTCATTTTCCCGGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTCCAATTCCACACTCATCCTCTCTTCCTTCCATCCTGTCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGTTCTGGAAGCAG--------------------------------------------CTGATTTTGATCCCAATG-CCACCACTTATTGGCTA-----TAAGG-CAAGATTTTCTCTCTCTCTCTCTTTAGAA---------CATCAATTAACAT---AAGGATATTTGAATAGAAATACTCATTGTTAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101030860 911 + 187378091 TACAGAAGACTCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACTACTCAGTCATCCTTTAGGACTCGGCGACACGTTAGCACAGATGGACCTGGCACTGCGGTGGGA------TGAGGTGGGGAGATCTTTTGACTTCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGACCACAGGAACAGCCATGGTTTAGTCACTTATTCCT------------TGCCA--------GGAGCTTCGTCTCAT--TCtcttttaataaaacaata-tttgagATCACTTTGTTATAGTGATGTCTGCTG-ATTTCCCCACTATAAAATGACTAGGTTCCCCTTTGTAAT---TAAATATTTGGG--GGAGATGCTCTGAGACTGTGacatcttctgtttcttctcaaactcctcctct-cctcctcccctctcccctccccctcatcctcacatttctcgatctcctctctctgcctctggagCACCGCTACATGCTGGCATTGATGGTTAGGGcacttggctca---------------------------------------------------------------cctcaacctcgg---------------------------------------------------------ctactttc------------------ctctccctctcccctcgtCGGCTCTTCCTTGGTAGCttcttctctgttgaattccCACATCCTT-GAACTCTGCAGGTAGAATCCCTTTCATTTTCCCGGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTCCACTTCCACACTCGTCCTCTCTTCCTTCCATCCTGTCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGTTCTGGAAGCAG-CTGGTAGAGTGGAAAGGGCACAGGCTTTGGAGTAAGTC-AGACCTGATTTTGATCCCAGTg-ccaccacttactagcta-----taaGACcaagattttctctctctctctctttagaa---------cATCAATTAACAT---AaggatatttgaaaagaaatactCATTGTTAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4898508 912 + 91754291 TACAGAAGACTCCTGTCAAATGCACACGCGTTAACCACGT--GTTACCCAAGGACGACTCAGTCATCCTTTAGGACTCGGCGACACGTTAGCACAGATGGACCTGGCACTGCGGTGGGA------TGAGGTGGGGAGATCTTTTGGCTTCAGGTCATTGAGGATAT---TGTTATTACTGCAAAGACCACAGGAACAGCCGTGGTTTAGTCACTTATTCCT------------TGTCA--------GGAGCTTCGTCTCAT--TCTCTTTTAATAAAACAATA-TTTGAgatcactttgttatagtgatgtctgctg-atttccccactataaaatgactagtttcccctttgtagt---taaatatttggg--ggagatgctctgagactgtgacatcttctgtttcttctcaaactcctcccctccctcctcccc-ctcccctccccctcatcctcacatttctcgatctcctctctctgcctctGGAGCACCGCTACATGCTGGCATTGATGGTTTGGGCACTTGGCTCA---------------------------------------------------------------CCTCAACCTCGG---------------------------------------------------------CTACTTTC------------------CTCTCCCTCTCCCCTGGTCGGCTCTTCCTTGGTAGCTTCTTCTCTGTTGAATTCCCACATCCTTTGAACTCTGCAGGTAGAATCCCTTTCATTTTCCCGGGAATGACCAAGCCTCCAGCCTGAATTACTTCAACTTCCTG---TATTCTAC-AATATCTCCAAACATCTCTACTTCCACACTCATCCTCTCTTCCTTCCATCCTGTCTCAGACAAAG------------AG-----------GAGGCCAGCTGGAGTTCTGgaagcag-ctggtagagtggaaagggcacaggctttggagtaagtc-agacctgattttgatcccaatg-ccaccacttactagcta-----taagaccAAGATTTtctctctctctctctctcGAA---------CATCAATTAACAT---AAGGATATTTGAATAGAAATACTTATTGTTAAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92376398 885 - 98464013 TACAGAAGACCCCTGTCAAACGCACACGCGTTAGCCACGT--GTTACCCAAGGACGACTCAGTAATCCTTTAGGACGCGGTGACACGTTAGCACAGATGCAGCTGGCACTGAGGCGGGG------TTGGGAGGGGAGATCTTTTGGCTGCAGGTCACTGAGGATA------TGACTCCCTCAAAGACCACAGGAGCAGCCGTGGtttgttcacttattctttgccaggcgctatgcca--------ggagctccgtctcattgtctcctttaatAAAACAATATTTTGGgatcactttgttatagtgatgtctgctg-gtttctccactgtaaaacgactggttttccctttgtaattaataaatatttggga-ggaggtagtttgaggctgtgACACA---------TTCTCAAACCTCCCCCACC---------------------------CCCCACTTTCCTGGGTCTCCTCTCTCTGCCTCTGGAGCACCGCTATATGCTGCGGGAGATGGTTTGGGCCCTTGGCTTG---------------------------------------------------------------CCCC-ACCTTGG---------------------------------------------------------CTGCGTTC------------------CTATCCCTGCCCCCTGGTCAGCTCTTCCTTGGTAGCTCCTTCTCTGCTGAATTCCCACATCCTT--------GCAGGGAGAATCCCTTACATTTTCCTGGGAATGACCAAGCCTCCAACCTGAAT------GACCTCCTG---TATTCTACAAAGATCTCCAAACATCTCCACGTCCACAGTCATCCTGTCTTCCTTTCATCCTATCTCAGACAAAGTGGAAGGGCCTTTG-----------GAGGCCAGCTGGAGCTCTGgaagcag-ctggtagagtggaaagggcacaggcattggagtaagtc-agacctggttttgatcccactg-ccactacttactagcta-----taagaccaagcttttctctctctc------tagaa---------aaacgattaacat---aaggatatttgaatagaaacactcattgttaagg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24758010 1060 - 42124431 TAAGGAAGACCC--GTCAAGGGCACATGTGTGAACCACATGGGTTACCCAGGGACAACTCGTTAACCCTTTGGGACGCAGAGACACGTTAGCACAGATTAATTT-GCGCCGAGGTGAGGTACGATTGAGGTGGCGAGACCTTCGGGCCGTAGGTCCCTGGGGATGTGGCTATTATTACCTGGAGGACTAAAATAATAGTCATTGTTTATTGACTTGGTCCT------------TGCCAGGCAGCTGGGAGCTTTGTCGCATCATCTCTTTTGATAAAACAGCATTTTGAgatcacttggttaaggtgagatctgctgcttttctccaccgtgatgttactatgtttccccttgcaa----taaatattgggggaggggatactgtgagactatgacatactgt-----ttctcAAGTTTGCCCCCTGC-------------------------TCCTCAGTGTCCTTGGTCC----------ACTCTGGAACACGACTCCATGCTGTCATTGATGGTTTGGGCGCTTGGCTCACAGCCTTCCTGTCACCCCAATCCTGCCATCTGCCTAAGTCAACGGTATTAGCCTCCCCTTGCCCCTCAACTCTGGTTCCCTGGTTACTGCCTCTTGCCCTGGTTTGACACTCCCCTGACTCAGCTTCCTCCTCTGCTTTCACATGACTCCGATCCTTTCCCTCCCTCTCCCCTAGAGGACTCTACCTTGGCAGTTACTTCGCTGCTGACTTCCCACATCCTTCTATCTCTGCAAATAATATCACAT-CACTTTACTGGGAACAACCAAGCCTCGAGCCTGCACTGCTTCAACTCCCTAATCCTTTCTCT-ATGTTCTCCAAATATCTCCACCTCCACAGTCATCC-----TCCTTCTAACCAATTTCGGGCCAAG------------AAAAGGGCTTTCTGAGGCCAGCTGGAGCTCTGAgagcagcctggtagagtaggaaggacaaggactttggggtaagtcaaggtctggtgtggatcttggtaccccccgtttactaacCATACTTTACAACCAAGTTGTTTTGGGTTTTTCCCCTTTGAATTTCCTGAGCATCAGTGAACTTACCAATGATGTCTGAATAGAAATACTAATTGTTAGGG i canFam3.chr34 C 0 C 0 a score=2319495.000000 s hg38.chr3_KI270781v1_alt 20862 705 + 113034 ATTATAAGAATTAGTATCAATGTGTGACCAATTTCCTGAGAGAGCT-CTGACATGTAATGCTCAGTAAAGGATAGCTGTTATTATT-------TTCATAGTTTCGGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgaattactcctcctctctcctgtggcttcagcctctccctctcaattggtttattctctcagcttttcaacataatcaaatctctcctatcttcaaaaaCAAGCAAACAACAAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCTTTCTTCCCTTGTCATGAAAAGGGAACTTCCACAGGAGACATTTATGCTTTAACAAATGCCTGGTTCCTGAAGCTTCCTAGTTCTTGTAGGAATCTCTCCTTTGgtttcctgaatcagtggattgtgttatttcatcaattttggaaaattctcagccattatctcttcaaatattgcctctgctccattctctctctcctctcttctagaactccaattaaacgtatattggattatctccctgtgtcttctattttatttatcttcttatctgtattttccatctttatgcctctctggacttcattctggatagtttcttctgacttatcttcctttccaccaattattagctcttaactcttctatagagttctttattgagttatcatacttttcagttctataatat s panTro4.chr3 13771117 701 - 202329955 attataagaattagtatcaatgtgtgaccaatttcctgagagagct-ctgacatgtaatgctcagtaaaggatagctgttattatt-------TTCATAGTTTCGGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgaattactcctcctctctcctgtggcttcagcctctccctctcaattggtttattctctcagcttttcaacataatcaaatc----ctatcttcaaaaaCAAGCAAACAACAAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCTTTCTTCCCTTGTCATGAAAAGGGAACTTCCACAGGAGACATTTATGCTTTAACAAATGCCTGGTTCCTGAAGCTTCCTAGTTCTTGTAGGAATCTCTCCTTTGgtttcctgaatcagtggattgtgttatttcatcaattttggaaaattctcagccattatctcttcaaatattgcctctgctccattctctctctcctctcttctagaactccaattaaacgtatattggattatctccctgtgtcttctattttatttatcttcttatctgtattttccatctttatgcctctctggacttcattctggatagtttcttctgacttatcttcttttccaccaattattagctattaactcttctacagagttctttattgagttatcataattttcagttctataatat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13753085 702 - 202140232 ATTATAAGAATTAGTATCAATGTGTGACCAATTTCCTGAGAGAGTT-CTGACATGTAATGCTCAGTAAAGGATAGCTGTTAAGATT-------TTCATAGTTTCCGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgaatta---ctcctctctcctgtggcttcagcctctccctctcaattggtttattctctcagcttttcaacataatcaaatctctcctatcttcaaaaaCAAGCAAACAACGAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCTTTCTTCCCTAGTCATGAAAAGGGAACTTCCACAGGAGACATTTATGCTTTAACCAATGCCTGGTTCCTGAAGCTTCCTAGTTCTTGTAGGAATCTCTCCTTTCgtttcctgaatcagtggattgtgttatttcatcaattttggaaaattctcagccattatctcttcaaatattgcctctgctccattctctctctactctcttctggaactccaattaaacgtatattggattatctccctgtgtcttctattttatttatcttctcatctgtattttccatctttatgcctctctggacttcattctggatagtttcttctgacttatcttcctttccaccaattattagctattaactcttctatagagttctttattgagttatcatacttttcagttctataatat i ponAbe2.chr3 N 0 C 0 s nomLeu3.chr11 14310618 705 - 123690457 ATTATAAGAATTAGTATCAATGTGTGACCAATTTCCTGAGAAAGCT-CTGACATGTAATGCTCAGTAAAGGATAGCTGTTATTATT-------TCCATAGTTTCGGTCCCTATGCCCTCTAAAAAATTCTTCAcgcttcatgaattactcctcctctctcctgtggcttcagcctctctctctcaattggtttattctctcagcttttcaacataatcaaatctctcctatcttcaaaaaCAAGCAAACAACAAAACCAGAAACTCTTCTGCAAAGAAACCCACCGGTTCCCTCAAGTGCTTTCTTCCCTTGTCATGAAAAGGGAATTTCCACAGGAGACATTTATGCTTTAACCAATGCCTGGTTCCTGAAGCTTCCTAGTTCTTGTAGGAATCTCTCCTTTGgtttcctgaatcagtggattatgttatttcatcaattttggaaaattctcagctattatctcttcaaatattgcctctgctccattctctctctcctctcttctggaactccaattaaacgtatattggattatctccctgtgtcttctattttatttatcttcacatctgtattttccatgtttatgcctctctggacttcgttctggatagtttcttctgacttatcttcctttccaccaattatgagctattaactcttctatagagttctttattgagttatcatacttttcagttctataatat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103594271 703 + 192599291 attataagaattagtatcaatgtgtgaccagattcctgagagagct-ctgacatgcaatgctcagtaagcgatagctgttattATT-------TTCATAGTTTCGGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgcattacccctcctctctcctgtggcttcagcctctcactctcaattggtttattctctcagcttttcaacaagatcaaatctctcctatcttcaaaaaCAAGCAAACAACAAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCATTCTTCCCTTGTCATGAAAAGAGAACCTCCACAGGAGACATTTATGCTCTAACCAATGCCTGGTTCCTGAAGCTTCCTAATTCCTGTAGGAATCTCTCTTCTAgtttcttgaattagtggattgtgttatttcatcaattttggaaaattctcagc-attatctcttcaaatattacctctgctccattctctctctcctctcttctggaactccaattaaacgtatattggattctctccctgtgtcttctattttatttatcttctcacctgtattttccatctttatgcctctccggacttcattctggatagtttcttctgacttatcttcctttccaccaattatttgctattaactcttctacagagtt-tttattgagttaccctacttttcagttctataatat i rheMac3.chr2 C 0 I 307 s macFas5.chr2 103235610 703 - 192460366 ATTATAAGAATTAGTATCAATGTGTGACCAGATTCCTGAGAGAGCT-CTGACATGCAATGCTCAGTAAGCGATAGCTGTTATTATT-------TTCATAGTTTCGGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgcattacccctcctctctcctgtggcttcagcctctcactctcaattggtttattctctcagcttttcaacaagatcaaatctctcctatcttcaaaaaCAAGCAAACAACAAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCATTCTTCCCTTGTCATGAAAAGAGAACCTCCACGGGAGACATTTATGCTCTAACCAATGCCTGGTTCCTGAAGCTTCCTAATTCCTGTAGGAATCTCTCTTCTAgtttcttgaattagtggattgtgttatttcatcaattttggaaaattctcagc-attatctcttcaaatattacctctgctccattctctctctcctctcttctggaactccaattaaacgtatattggattctctccctgtgtcttctattttatttatcttctcacctgtattttccatctttatgcctctccggacttcattctggatagtttcttctgacttatcttcctttccaccaattatttgctattaactcttctacagagtt-tttattgagttatcctacttttcagttctataatat i macFas5.chr2 C 0 I 309 s papAnu2.chr2 101031771 699 + 187378091 ATTATAAGAATTAGTATCAATGTGTGACCAGATTCCTGAGAGCGCT-CTGACATGTAATGCTCAGTAAGcgatagctgttattatt-------ttcatagtttcagtCCCTGTACCCTCTAAAAACTTCTTCATGCTTCATGCATTACCCGTCCTCTCTCCTGTGGCTTCAGCCTCTCACTCTCAATTGGTTTATTCTCTCAGCTTTTCAACAAGATCAAATCTCTCCTAtcttcaaaaacaagcaaacaacaaaaccaaaaactcttCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCATTCTTTCCTTGTCATGAAAAGAGAACCTCCATAGGAGACATTTAGGCTCTAACCAATGCCTGGTTCCTGAAGCTTCCTAATTCCTGTAGGAATCTCTCTTCTAGTTTCTTGAATTAGTGGATTGTGTTATTtcatcaattttggaaaattctcagc-attatctcttcaaatattaccTCTGCtccat----tctctcctctcttctggaACTCCAATTAAACGTATATTGGattctctccctgtgtcttctattttgtttatcttctcaTCTGTATTTTCCGTCTTTATGCCTCTCCGGACTTCATTCTGGATAGTTTCTTCTGACTTATCTTCCTTTCCACCAATTATTTGCTATTAACTCTTCTACAGAGTT-TTTATTGAGTTATCCTACTTTTCAGTTCTATAATAT i papAnu2.chr2 C 0 I 314 s chlSab2.chr15 4899420 703 + 91754291 ATTATAAGAATTAGTATCAATGTGTGACCAGTTTCCTGAGAGAGCT-CTGACATGTAATGCTCAGTAAGCGATAGCTGTTATTATT-------TTCATAGTTTCGGTCCCTGTGCCCTCTAAAAACTTCTTCATgcttcatgcattacccctcctctctcctgtggcttcatcctctcactctcaattggtttattctctcagcttttcaacaagatcaaatctctcctatcttcaaaaaCAAGCAAACAACAAAACCAAAAACTCTTCTGCAAAGAAACCCACCGGCTCCCTCAAGTGCATTCTTCCCTTGTCATGAAAAGAGAACCTCCACAGGAGACATTGATGCTCTAACCAATGCCTGGTTCCTGAAGCTTCCTAATTCCTATAGGAATCTCTCCTCTAgtttcttaaattaatggattgtgttatttcatcaattttggaaaattctcagc-attatctcttcaaatattacctctgctccattctctctctcctcccttctggaactccaattaaacgtatattggattctctccctgtgtcttctattttatttatcttctcatctgtattttccatctttatgcctctccggacttcattctggatagtttcttctgacttatcttcctttccaccaatcatttgctattaactcttctacagagtt-tttattgagttatcctacttttcagttctataatat i chlSab2.chr15 C 0 I 313 s calJac3.chr15 92377283 677 - 98464013 attataggaattagtatcaaggtgtgaccaatttcctgtgactgct-cccacatgtaatgctca-taaatgataggggttattatt-------TTCCTAGTTTTGGTCcccatgccctctaaaaccttcttcaagcctcatgcattacccctcctctctcctgtggcttcagcttctccctctccattggtttcttctcttagcttttcaacaagatcaaatctctcccatcttcaaaaaCAGGCAGACAACAAAACCAAAAACTC-TCTGCAAAGAAACCCAC----TCCCTCAAATGCCTTCTTCCCTTGTCATGAAAAGAGAACGTTCACAGGAGACATTTACGCCCTAACCAGTGCCTGGTTCCTG-----------------TAGGCATCTCCCCTTTGGtttc-tgaatcagtggactgggttatttcatcaattctgaaaaattctcagccattatctcttcaaatactgactctgcaccactctctctctcctctcttctggaactccaattaaacatgtattgtattctctccctgtgtcttctatcttatttaccttctcgtctgtattttccatctttgtgcctctctggacatcactctggagagtttcttctggcttatcttccttttcaccaattatttgctattaactcttccatagagttcttc----agttatcatacttttcagttctgtaatat i calJac3.chr15 C 0 C 0 s canFam3.chr34 24759070 627 - 42124431 GTTTTAAGAATTAATATCAGTGTGTGA-CAACTGCCTGAAATGGATACTGTCATGTAATGTTCAATAAATGGTCGGTATTATGGGTATAATCATTCACGGTATGGGCCCCTGC-TCCTCTAAAAA----------CGTCATGCATTATctctcctctcccatat--tttcagcctgtcactctcaactggtttcttccctcagcttataaaccaggtcaaatctctcccaccttcaaaaacaaaCCA----------CAAGAACAGTGCCATAAAGAAATCCACCAAGTCCCTCAAGTAC--TCACACCTTGTCATGGAAGAAGAACGTCCCAAGCAGGATTTCTTGGCTTCACTAATTCCT------TCGAGATTTCTATTTCGTGTGGGAATCTCTTCTGTGgctttttgattcagagaattggctcatttcatcaattctggaaaattcttaactcttagctcctcaaatattg-------------------------------------ccaaagaaacacatattaggtttt----ctgtatcttc--ccctatttatcattt---ctgtattttccatctttatgtctcactaggcctcattctggacgatttcttctgacttatcttcttttccac--------tgttattaacccttctattgagttcttaattggattattgcagtttttagttctataatat i canFam3.chr34 C 0 C 0 a score=39708.000000 s hg38.chr3_KI270781v1_alt 21567 11 + 113034 caaatggttct s panTro4.chr3 13771818 11 - 202329955 caaatggttct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13753787 11 - 202140232 caaatggttct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14311323 11 - 123690457 caaatggttct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103595281 11 + 192599291 caaatggttct i rheMac3.chr2 I 307 C 0 s macFas5.chr2 103236622 11 - 192460366 caaatggttct i macFas5.chr2 I 309 C 0 s papAnu2.chr2 101032784 11 + 187378091 caaatggttct i papAnu2.chr2 I 314 C 0 s chlSab2.chr15 4900436 11 + 91754291 caaatggttct i chlSab2.chr15 I 313 C 0 s calJac3.chr15 92377960 11 - 98464013 caattggttct i calJac3.chr15 C 0 C 0 s canFam3.chr34 24759697 11 - 42124431 ctaattgtttt i canFam3.chr34 C 0 I 201 a score=1158369.000000 s hg38.chr3_KI270781v1_alt 21578 352 + 113034 ttttaaaatcttcaccgtt-gctttcaaaatttttatatccttacataaaattttaaattcaatttttatctccatgaacacagtaagcacg-gtttcattacaggttgtatcgagttattctaatatctgggatc-cggtgggtctatttctatggtccacagtttctgttgattctgacttgtggtgttttgtctcatgtagctcttgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcctcttccaaagaggatt--ttttttt-----tccttttttccaacacctgagggaactagcagtccgggaataaggcttgaggc s panTro4.chr3 13771829 350 - 202329955 ttttaaaatcttcaccgtt-gctttcaaaatttttatatccttacataaaattttaaattcaatttttatctccatgaacacagtaagcaca-gtttcattacaggttgtatcgagttattctaatatctgggatg-cggtgggtctatttctatggtccacagtttctgttgattctgacttgtggtgttttgtctcatgtagctcttgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcctcttccaaaaaggatt--tttttt-------ccttttttccaacacctgagggaactagcagtcCGGGAATAAGGCTTGAGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13753798 349 - 202140232 ttttaaaatcttcaccgtt-gctttcaaaatttttatatccttacataaaattttacattcaatttttatttccattaacacagtaagcatg-gtttcattacaggttgtatcaagttattctaacatctgggatc-tggtgggtctatttctatggtccacagtttctgttgattctgacttgtggtgttttgtctcatgtagttcttgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctagaatcttcttccaaagaggaat--tttttt-------ccttttttcc-acacctgagggaactagcagtcCAGGAATAAGGCTTGAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14311334 351 - 123690457 ttttaaaatcttcaacatt-gctttcaaaatttttatatccttacataaaattttaaattcaatttttatctccatgaacacagtaagcaca-gtttcattacaggttgtatcgagttattctaatatctgggatc-tggtgggtctatttctatggtccacagtttctgttgattctgacttgtggtgttttgtctcatgtagctcttgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcttcttccaaagaggatt--tttttc------ctcttttttccaacacctgtgagaactagcagtccaggaataaggcttgaggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103595292 354 + 192599291 ttttaaaatcttcaacgtt-gctttcaaaatttttatatccttacataaaattttaaattcaatgtttatctccatgaacacagtaagcatg-gtttcattacgggttgtatctagttattctaatatctgggatc-tggcaggtctgtttctatggtccacagtttctattgattctgacttgcattgttttgtctcatgtaggtcgtgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcttcttccaaagaggatc--ttttttttt---tccttttttccaacacctgagggaactagcagtccaggaacaaagcttgaggc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103236633 356 - 192460366 ttttaaaatcttcaacgtt-gctttcaaaatttttatatccttacataaaattttaaattcaatgtttatctccatgaacacagtaagcatg-gtttcattacaggttgtatctagttattctaatatctgggatc-tggcaggtctgtttctatggtccacagtttctattgattctgacttgcattgttttgtctcatgtaggtcgtgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcttcttccaaagaggatcttttttttttt---tccttttttccaacacctgagggaactagcagtcCAGGAACAAAGCTTGAGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101032795 357 + 187378091 ttttaaaatcttcaacatt-gctttcaaaatttttatatccttacataaaattttaaattcaatatttatCTCCATGAACACAGTAAGCATG-GTTTCATTACAGGTTGTATCTAGTTATTCTAATATCTGGGATC-TGGCGGGTCTGTTTCTATGGTCCACAGTTTCTATTGATTCTGACTTGCATTGTTTTGTCTCATGTAGGTCGTGTGCCTCTGTGCTTTCTGGACAATTTATTTGAAATGGCTCTTTTGAGAGTTAATTTGAAATCTAGGATCTTCTTCCAAagaggatc--tttttttttccccccttttttccAACACCTGAGGGAACTAGCAGTCCAGGAACAAAGCTTGAGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4900447 359 + 91754291 ttttaaaatcttcaacgtt-gctttcaagatttttatatccttacataaaattttaaattcaatttttatctccatgaacacagtaagcatg-gtttcattacaggttgtatctagttattctaatatctgggatc-tggcgggtctgtttctatggtccatagtttctattgattctgacttgcattgttttgtctcatgtaggtcgtgtgcctctgtgctttctggacaatttatttgaaatggctcttttgagagttaatttgaaatctaggatcttcttccaaagaggatctttttttttttttttccttttttccaacacctgagagaactagcagtcCAGGAACAAAGCTTGAGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92377971 354 - 98464013 tttaaaaatcttcaatgttcgctttcaaaatttttatatccttacataaaagtttaaattcaatttttatctcggtgaacatagtaacctcg-gtttcattacaggttgtctcttctaattctaatatctgggatc-cagtgggtctgtttctgtggtccatagtttctgttgattctgactcaagttattttgtctcacatagctcatgtgcctctgtgctttctggatattttatttgaaatgactc--ttgagaattaatttgagatctaggatcttattccaaagaggatc--tttttttttt--ttccttttcccaacacctgagggcactagcagtcCAGGAACAAGGCTTGAAGC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24759909 343 - 42124431 tttttttatctgcattgtt-gctttcaaaatttccatatccttacataaaacttttaattctgcttttatctccttg-acacagtgtgtgtgcattgctttattggttgtacctaagaactctaatatctgatatcttggtaggtctatttctatggt-tatggctactgttgatcctgagacatgttgttttgtctcacatacctc-tatgcctctgttc-tcctggacaaattatatgaaatgactattttgaaaattaa-aagagaccaaggatcttcttccagagggatcc--accttt---------cttttgccagcacccaagagcact--CAGTCCAGGAACAGGGCTTGAGGA i canFam3.chr34 I 201 I 28 a score=214321.000000 s hg38.chr3_KI270781v1_alt 21930 70 + 113034 tgttctgtatgtccacagggccagtacccacccccttttccagatgcagccctttggggccactactcag s panTro4.chr3 13772179 70 - 202329955 TGTTCTGTATGTCCACAGGGCCAGTACCCACCCCCTTTTCCAGATGCAGCCCTTTGGGGCCACTACTCAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13754147 67 - 202140232 TGTTCTATATGTCCACAGGGCCAGTA-CCACCCCATTT--CAGATGCAGCCCTTTGGGGCCACTGCTCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14311685 70 - 123690457 tgttctatatgtccacagggccagtacccacccccatttccagatgcagccctttggggccactgctcag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103595646 70 + 192599291 tgttctatatgtccacagggccagtacccacccctatttccagatgcagccctttggggccactgctcag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103236989 70 - 192460366 TGTTCTATATGTCCACAGGGCCAGTACCCACCCCTATTTCCAGATGCAGCCCTTTGGGGCCACTGCTCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033152 70 + 187378091 TGTTCTATATGTCCACAGGGCCAGTACCCACCTCTATTTCCAGATGCAGCCCTTTGGGGCCACTGCTCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4900806 70 + 91754291 TGTTCTATATGTCCACAGGGCCAGTACCCACCCCTATTTCCAGATGCAGCCCTTTGGGGCCACTGCTCAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92378325 70 - 98464013 TGTTCTGTATGTTCACAGGGCCAGTGTCCAACCCCATTTCCAGATGCAGCCCTTTGGGGCTACTGCTCAG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24760252 28 - 42124431 I a score=186466.000000 s hg38.chr3_KI270781v1_alt 22000 59 + 113034 agcacatagtgggctcatactaagtttccttctttactaacagtagacaccaactgttc-- s panTro4.chr3 13772249 59 - 202329955 GGCACATAGTGGGCTCATACTAAGTTTCCTTCTTTACTAACAGTAGACACCAACTGTTC-- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13754214 56 - 202140232 AGCACATAGTGGGCT-ATACTAAGTTTC--TCTTTACTAACAGTAGACACCAACTGTTC-- i ponAbe2.chr3 C 0 M 866 s nomLeu3.chr11 14311755 59 - 123690457 agcacatagtgggcttatattaagtttcctcctttactaacagtagacaccaactgttc-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103595716 59 + 192599291 agcacatagtgggcttatactaagtttcctcctttactaacagtagacaccaactgttc-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237059 59 - 192460366 AGCACATAGTGGGCTTATACTAAGTTTCCTCCTTTACTAACAGTAGACACCAACTGTTC-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033222 59 + 187378091 AGCACATAGTGGGCTTATACTAAGTTTCCTCCTTTACTAACAGTAGACACCAACTGTTC-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4900876 59 + 91754291 AGCACATAGTGGGTTTATACTAAGTTTCCTCCTTTACTAACAGTAGACACCAACTGTTC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92378395 57 - 98464013 AGCAAAGAGTGGGCTTATACT--GTTTCCACCTTTGGTAACAGGAGACACCAACTGTTC-- i calJac3.chr15 C 0 C 0 s canFam3.chr34 24760280 61 - 42124431 AGCAGAGGATGGGCTTATACTGGGTTTCCACCTTGGTAGACAGTGACTGCCAACTATGTCC i canFam3.chr34 I 28 C 0 a score=672564.000000 s hg38.chr3_KI270781v1_alt 22059 257 + 113034 ctccagctctagggagccccccaaaagtactgttcaccctgctcacctcacaTGGTTCTGAGGATTGGCAGACAGCCCAGGGTAAACATATCAGTGGGGTA---CAAGTGACTTGCACATCTCCAGGACACTATGTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGCATGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAAGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCGGCTCTATTAAT s panTro4.chr3 13772308 257 - 202329955 CTCCAGCTCTAGGGCACCCCCCAAAAGTACTGTTCACCCTGCTCACCTCACATGGTTCTGAAGATTGGCAGACAGCCCAGAGTAAACATATCAGTGGGGTA---CAAGTGACTTGCACATCTCCAGGACACTATGTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGCATGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAAGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCGGCTCTATTAAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14311814 257 - 123690457 ccccagctctagggagtcccccaaaagtactgctcaccctgctcacctcacaTGGTTCTGAGGATTGACAGACAGCCCAGAGTAAACATATCAGTGAGGTA---CAAGTGACTTGCACATCTCCAGGACACTATGTAATGCAATGCGACCCCTCACACCCACCCAAGGACCTTGGTGTGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAAGTAACCAGTTTAGGCTCTTATCTCTCCCCATTCTGTCCTATTAAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103595775 257 + 192599291 ctccagctctagggagtcccccaaaagtactgctcaccttgttcacctcATATGGTTCTGAGGATTGGCAGACAGCCCAGGGTAATCATATCAGTGGGGTA---CAAGTGACTTGCACATCTCCAGGACACTATGTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGTGTGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAGGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCTGCTCTATTAAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237118 257 - 192460366 CTCCAGCTCTAGGGAGTCCCCCAAAAGTACTGCTCACCTTGTTCACCTCATATGGTTCAGAGGATTGGCAGACAGCCCAGGGTAATCATATCAGTGGGGTA---CAAGTGACTTGCACATCTCCAGGACACTATGTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGTGTGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAGGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCTGCTCTATTAAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033281 257 + 187378091 CTCCAGCTCTAGGGAGTCCCCCAAAAGTACTGCTCACCTTGTTCATCTCACATGGTTCTGAGGATTGGCAGACAGCCCAGGGTAATCATATCAGTGGGGTA---CAAGTGACTTGCACATCTCCAGGACACTATTTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGTGTGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAGGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCTGCTCTATTAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4900935 257 + 91754291 CTCCAGCTCGAGGGAGTCCCCCAAAAGTACTGCTCACCTTGTTCACCTCACATGGTTCTGAGGATTGGCAGACAGCCCAGGGTAATCATATCAGTGGGGTA---CAAGTGACTTACACATCTCCAGGACACTATGTAATGCAATATGACCCCTCACACTCACCCAAGGACCTTGGTGTGTCAGCTGCCTTCTCCCAGGAAGTGAACACATCCCAGGTAACCAGTTTAGGCTCTTACCCCTCCCTGTTCTGCTCTATTGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92378452 260 - 98464013 CTCCAGCTCTAGGGAGCCCCCGAAAAGTACTGCTCACCCTGCTCTCCTCACATGGTTCTGAGGATTGGCAGACAACCCAAGGTAAACATATCACTGGGGTACAGCAGGTGACTCCCACATCTCCAGGACACTATGGAATGAAATGTGACCCCTCACACTCACCCAACGAGCTTGGCATGTCAGCTCTCTTCTCCCGGGGCGTGAACACATCCCAGGTAAGCAGTTTAGGCTCTTACTCCTCCCTGTTCTGCTCTATTAAT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24760341 187 - 42124431 CTCCAGCTCTACG-------------------------------ATCTA----GATTCTGAGGATTGGCAGACAACCC--------------------------CA--------GCATGTCTTTAGGACAATGTGGAATGCAATATTGCCCTTCCCACTCACCCCAGAAGCTTGACCTATTAGCTGCCTTCTCCCAGACAAGGAACAGA----GGCTCACCCATTTAGGCTCTTACCCCTCCCAATTCTACTCTCTTAAT i canFam3.chr34 C 0 I 427 e ponAbe2.chr3 13754270 866 - 202140232 M a score=40437.000000 s hg38.chr3_KI270781v1_alt 22316 18 + 113034 GAGGCCTGCAGTGCTATT s panTro4.chr3 13772565 18 - 202329955 GAGGCCTTCAGTGCTATT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14312071 18 - 123690457 GAGGCCTTCAATGTTATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596032 18 + 192599291 GAGACCTTCAATGTTATT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237375 18 - 192460366 GAGACCTTCAATGTTATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033538 18 + 187378091 GAGACCTTCAATGTTATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4901192 18 + 91754291 GAGGCCTTCAATGTTATT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92378712 18 - 98464013 GAGGCCTTCAATGTTGTT i calJac3.chr15 C 0 C 0 e ponAbe2.chr3 13754270 866 - 202140232 M e canFam3.chr34 24760528 427 - 42124431 I a score=104055.000000 s hg38.chr3_KI270781v1_alt 22334 44 + 113034 AAGAAGATAG-TTTGATATCTCCTCTAACTTTTGTAGCTGTCTTT s panTro4.chr3 13772583 44 - 202329955 AAGAAGATAG-TTTGATATCTCCTCTAACTTTTATAGCTGTCTTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14312089 44 - 123690457 AAGAAGATAG-TTTGATGTCTCCTCTAACTTTTGTAGCTGTCTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596050 43 + 192599291 AAGAAGATAG-TTTGAT-TCTCCTCTAACTTTTGTAGCTGCCTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237393 43 - 192460366 AAGAAGATAG-TTTGAT-TCTCCTCTAACTTTTGTAGCTGCCTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033556 43 + 187378091 AAGAAGATAG-TTTGAT-TCTCCTCTAACTTTTGTAGCTGCCTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4901210 43 + 91754291 AAGAAGATAG-TTTGAT-TCTCCTCTAACTTTTGTAGCTGCTTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92378730 45 - 98464013 AAGAAGAGAGTTTTGATGTCTCCTCTAACTTTTATAGCTGTCTTT i calJac3.chr15 C 0 I 309 s canFam3.chr34 24760955 39 - 42124431 aaaaaaATGA-TTTGAGGTCTCCTGTAATTTCTGTTATTT----- i canFam3.chr34 I 427 C 0 e ponAbe2.chr3 13754270 866 - 202140232 M a score=953960.000000 s hg38.chr3_KI270781v1_alt 22378 377 + 113034 AGAAGTAATGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCACTTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGAGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCCACTCCCTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGTCTCCATGACCATCCACCCATGTATGAAGGCATCTCTG--ATGA---CTGGGCTTCCCA-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAAATTCCTCTTTGAGTAGACCTCTCC s panTro4.chr3 13772627 376 - 202329955 AGAAGTA-TGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCACTTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGAGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCCACTACCTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGTCTCCATGACCATCCACCCATGTATGCAGGCATCTCTG--ATGA---CTGGGCTTCCCA-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAAATTCCTCTTTGAGTAGACTTCTCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14312133 377 - 123690457 AGAAGTAATGGTGATTTATCCCTTAGTCTACCACTACTGGAAACAGTTGACAGGGAATCTCTAATGTCCCTTGGTACCACTTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGGGTTTTATAAGGGGACTAAAGAATGCATTATAATACAGAGAGCAATTTATAACCAGCCACTACCTATGGCCTATGAGCTGGCCCATGCCACTGGGCCCA-------GCTTC--------------------------CAGGCCGTCTTCCTGTCTCCATGACCATCCACCCATGTATGCAGGCATCTCTG--ATGA---CTGGGCTTCCCA-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAAATTCCTCTTTGAGTAGACCTCTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596093 379 + 192599291 AGAAGTAATGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCA-TTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGGGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCAACTACGTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGCGTCCAtgaccatccactcatgtacgcaggcatctctg--gtgagcgctgggcttccca-gtggtaatcagatatggatttggtcccAAGGTCTCTATAAGTGGGTGGACAGATTCCTCTTTGAGTAGACCTCTCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237436 379 - 192460366 AGAAGTAATGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCA-TTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGGGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCAACTACGTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGCGTCCATGACCATCCACTCATGTACGCAGGCATCTCTG--GTGAGCGCTGGGCTTCCCG-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAGATTCCTCTTTGAGTAGACCTCTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033599 380 + 187378091 AGAAGTAATGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCACTTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGGGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCAACTATGTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGTGTCCATGACCATCCACTCATGTACGCAGGGATCTCTG--GTGAGTGCTGGGCTTCCCA-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAGATTCCTCTTTGAGTAGACCTCTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4901253 380 + 91754291 AGAAGTAATGGTGATTTATCCCTTAGTCTACCATTACTGGAAACAGTTGGCAGGGAATCTCTAATGCCCCTTGGTACCACTTCTTTCCTGGCTGAACTTAGATCCTTCCTTTTATTCACCCACAGTTGGGTTTTATAAGGGGACTAAATAATGCATTATAATACAGAGAGCAATTTATAACCAGCAACTACGTATGGCCTATGACCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------GAGGCCATCTTCCTGTGTCCATGACCATCCACTCATGTATGCAGGCATCTCTG--GTGAGTGCTGGGCTTCCCA-GTGGTAATCAGATATGGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAGATTTCTCTTTGAGTAGACCTCTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92379084 347 - 98464013 agaaGTAATAGTGATTTATCCCT-----------TACTGGAAGCAGT--------AATCTCTAATGCCCTCTGATACCATTTCTTTCGTGGCTGACCTTAGATCTTTCCTTGTATTCACCCACAGTTGAGTTTTATAAGGGGACTACAGAATGCATTACAATACAGAGAGCCATTTATAG-TAGCCACTA-------CCTACGGGCTAGCCCATGCCACTGGGCCCA-------GCTTC--------------------------AAGGCCATCTTGCTGTCTCCATGACC-------CACATATGCAGACATCTCTGCTGTGAGTGGTGGGTTTCCCA-GGAGTAATCAG-TGCAGATTTGGTCCCAAGGTCTCTATAAGTGGGTGGACAAATTCCCCTTTGAGTAGACCTCTCC i calJac3.chr15 I 309 I 306 s canFam3.chr34 24760994 379 - 42124431 -AGAGGGAGAGTGGTTTGTACCTTAGTCCA-------GGAACGCACATGCCAGGAAATTGCTAATGCCCTTCA----TACTGCTTTTCTGTCTGAACTTCGATCCTTCTTTTTATTCATCTGTAGTTGAACTTTTTATGGG--------AAGGCATTATAGTCTGGAGAGCAATTTACAGCAAGTGACTGGAGATTGCCTAG--------CCATGCCCCTGGGTTCACTAGAGGGCTTTAGTGGGGCACCTTCCTGTCTCTTCAGGAGGGCACCTTCCTGTCTCTTCGACCATCCATCAGGATATG--AGCATCGCTGGAGTGGGTGCTGGGCTTCTGGCATGCTAATCTGATATGGATTTGACCCCGAGGTCTATATAAGTGGGTGGACAG-------TGTGAGCAGACTTCTTT i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13754270 866 - 202140232 M a score=26704.000000 s hg38.chr3_KI270781v1_alt 22755 9 + 113034 GATGTGAGC s panTro4.chr3 13773003 9 - 202329955 GATGTGAGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14312510 9 - 123690457 GATGTGAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596472 9 + 192599291 GATGTGAGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237815 9 - 192460366 GATGTGAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033979 9 + 187378091 GATGTGAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4901633 9 + 91754291 GATGTGAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92379737 9 - 98464013 GATGTGAGC i calJac3.chr15 I 306 C 0 s canFam3.chr34 24761373 9 - 42124431 GAAGGGAGC i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13754270 866 - 202140232 M a score=848014.000000 s hg38.chr3_KI270781v1_alt 22764 273 + 113034 CACCTGG--AAAAGG--CCTGTTCTTAGA-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTGCTCTGATTCTCCTAACACAGGCAGGGTCTCTCCCTGCCTTGTCTCATGTGGCCA-TTTC------------------------TCACACTCCATCTTATAGAATCGAGATGTTATGTACATATCATGTACCT---------------GTTG------tttttg----------------------------------tttgtttca-tttgttcgcctgggtggaaggggtttgaattattccagtttctatacccacgatgtataattattcttgggttgcacaaa s panTro4.chr3 13773012 271 - 202329955 CACCTGG--AAAAGG--CCTGTTCTTAGA-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTGCTCTGATTCTCCTAACACAGGCAGGGTCTCTCCCTGCCTTGTCTCATGTGGCCA-TTTC------------------------TCACACTCCATCTTATAGAATCGAGATGTTATG--CATATCATGTACCT---------------GTTG------tttttg----------------------------------tttgtttca-tttgttcgcctgggtggaaggggtttgaattattccagtttctatacccacgatgtataattattcttgggttgcacaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13755165 277 - 202140232 CACCTGG--AAAAAGGCCCTGTTCTTAGATTC-ATTACATTAACTCAAACATGATGCCTCCTTGTTAAGTCTGCTCTGATTCT-CTACCACAGACAAGGTCTCTACCTGCCTTGTCTCATGTGGCCATTTTC------------------------TCACACTCCGTCTTACAGAATCGAGATGTTATGTACATATCATGTACAT---------------GTTG------TTTTTGT---------------------------------tttgtttca-tttgtttgcctgggtggaaggggtttgaattattccaatttctatacccacgatgtataattattcttgggttgcacaaa i ponAbe2.chr3 M 866 C 0 s nomLeu3.chr11 14312519 306 - 123690457 CGCCTGG--AAAAGG--CCTGTTCTTAGA-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTGCTCTGATTCTCCTAACACAGACAGGGTCTCTCCCTGCCTTGTCTCATGTGGCCA-TTTC------------------------TCACACTCCATCTTATAGAATCGAGATGTTATGTACATATCATGTACAt---------------gttg------tttttgtttgttt-cattttgtttgtctgggttgaagaggtttgtttca-tttgtttgCCTGAGTGGAagtggtttgaattattccaatttctatacccatgacatataattattcttgggttgcacaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596481 318 + 192599291 CACCTGG--AAAAGG--CCTGTTCTTAGG-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTAATCTGATTCTCCTGTGACAGACAGGGTCTCTCCCTGCCTTGTCTCACGTGGCCA-TTTT------------------------TCCCACTCCACCATATAGAATCGAGATGTTATGTACATATCATGTCTTTCCTTTTGAGATG---GTAG------TTGTTTTTTGTTT-CGTTTTGTTTGCCTGGGTTGAAGAGGtttgtttca-tttgtttgcctgggtggaaggggtttgaattattccaatttctgtacccacggcatataattattcttgggttgcacaaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103237824 318 - 192460366 CACCTGG--AAAAGG--CCTGTTCTTAGG-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTAATCTGATTCTCCTGTGACAGACAGGGTCTCCCCCTGCCTTGTCTCACGTGGCCA-TTTT------------------------TCCCACTCCACCATATAGAATCGAGATGTTATGTACATATCATGTCTTTCCTTTTGAGATG---GTAG------TTGTTTTTTGTTT-CGTTTTGTTTGCCTGGGTTGAAGAGGtttgtttca-tttgtttgcctgggtggaaggggtttgaattattccaatttctgtacccacggcatataattattcttgggttgcacaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101033988 318 + 187378091 CACCTGG--AAAAGG--CCTGTTCTTAGG-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTAATCTGATTCTCCTGTGAcagacagggtctctccctgCCTTGTCTCACGTGGCCA-TTTT------------------------TCACACTCCACCATATAGAATCGAGATGTTATGTACATATCATGTCTTTCCttttgagatg---gtag------ttgttttttgttt-cgttttgtttgcctgggttgaagaggtttgtttca-tttgtttgcctGGGTGGAAGGGGTTTGAATTATTCCAATTTCTGTACCCACGGCATATAATTATTCTTGGATTGCACAaa i papAnu2.chr2 C 0 I 318 s chlSab2.chr15 4901642 318 + 91754291 CACCTGG--AAAAGG--CCTGTTCTTAGG-TC-ATTACATTAACTCAAACATGATGCCTCTTTGTTAAGCCTAATCTGATTCTCCTGAGACAGACAGGGTCTCTCCCTGCCTTGTTTCACGTGGCCA-TTTT------------------------TCACACTCCACCATGTAGAATCGAGATGTTATGTACATGTCATGTCTTTCCTTTTGAGATG---GTAG------TTGTTGTTTGTTT-CGTTTTGTTTGCCTGGGTTGAAGAGGTTGGtttca-tttgtttgcctgggtggaaggggtttgaattattccaatttctgtacccacggcctataattattcttgggttgcataaa i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92379746 310 - 98464013 CACCTGG--AAAAGG--CCTGTTCTTAGG-TC-ATGACGTTAAATCAAACATGAAGTCTCTTTGTTAATCCTGCTCTGACCCTTCTAACGCGGACAGGGTCTCTCCCTGCCTTGTTTCACCTGGCCG-TTTC------------------------TCACACTCCACCTTATAGAACTGACACGCTGTG-----------TCTTTCCTTTTGAGCTGACAGTTG------TTTTTGTTTGTTT-CA-TTTGTTTGCCCAGGTTGAAGAGGTTTGTTTCATTTTGTTTTCCTGAGTGGAagaggtttgaattattccagtttctctgtccacagcatatgattattcttgggttgcacaaa i calJac3.chr15 C 0 C 0 s canFam3.chr34 24761382 327 - 42124431 CACCTGGGAAAGAGG--CCTGTTCTTAGG-TAGGTAACACTTACTCAGACATGATGCCTTCATG--AAGCCTGCTCTGACTCCCCTAACATGGACAGGGTCTCTCCCTGCCTTGTCTCACACGGTCC-ATTCTCAGTGCCTGCTACGGAGTCCACATCACCCTCTACCTAGTGTAATCAAGATTTTATGTACACATCATGCTTTCTCTTTTGTGATG---GTGGGGttgttttttgtttgtttgctttttttttttttttg---------tctgtttcattttgttGGCACTGGTTGACGAGGCTTGAATTATTTCTATTGCTCAGTGCATGTCATA---------------TGCACAAA i canFam3.chr34 C 0 C 0 a score=320695.000000 s hg38.chr3_KI270781v1_alt 23037 90 + 113034 gccatttcattattgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttaccatgt s panTro4.chr3 13773283 89 - 202329955 gccatt-cattattgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttaccatgt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13755442 90 - 202140232 gccatttcattaccgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttatcatgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14312825 90 - 123690457 gccatttcattattgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttaccatgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596799 90 + 192599291 gccatttcattattgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttaccatgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103238142 90 - 192460366 gccatttcattattgtattgactgac---ttctcttttatctctagtccctattctcattccccttcctccacaggtagctattttaccatgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101034624 90 + 187378091 gccattTCATTATTGTATTGACTGAC---TTCTCTTTTATCTCTAGGCCCTATTCTCATTCCCCTTCCTCCACAGGTAGCTATTTTACCATGT i papAnu2.chr2 I 318 C 0 s chlSab2.chr15 4901960 90 + 91754291 gccatttcattattgtattgactgac---ttctcttttgtctctagtccctattctcattccccttcctccacaggtagctattttgccatgt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92380056 90 - 98464013 gccatttcgttattttattgactgac---ttctctttgatccctagtttctattctcattccctttcctccacaggaagccattttaccacgt i calJac3.chr15 C 0 C 0 s canFam3.chr34 24761709 93 - 42124431 GTCCTTTGGCTATTTTATGGATTAATGTGTCCTCTTTTATCTCTCTTCTCTGCTCTCATTCCCCTTTCTCTACAGGTCATTATTTTACTGTAT i canFam3.chr34 C 0 I 124 a score=2756197.000000 s hg38.chr3_KI270781v1_alt 23127 940 + 113034 taatgggcaactttatttgaatgtgttcttgcaaatgtgtactgttgatttatttgcatacatttaaaaaacctgtttgaaagctaccacatgataggtcttattctgtttcctcctttttatatttttaacacccaaccacgttgcagtgtgacatctaattcaaggcgtctagtctctgcataataccccagggaagttctcatgcggacccatagggagcacatatgaagatg-ttatcactgcttgttttttatggtggcagggagttgaagatcacctgagtgcccattgcggggagaatggagtggtaaaatgtaacaaggtgcccatggtggggtattatgcagaactgagctctgcctcctacctgcttatgagatggggaattccttagatagaggaacaaggctcagatgctgaacagccaaacagaataactatgtccacAAGGCCCCTCCTCTCCCATA-AGGTCTGTACCTGCTGAACTGTGTGGGGGCTGTTCA-------AAGAATTTGAACTTTGTTAATAGTCACAGTTCAGAGACAACTGATACCCTGGGCATCCCTGATACAAGCCATTGTAAGAAGAAACAGCATGGAACCAAAGAGAACACTTACTTTACCGGACAAAGGTATCTCCTGTTACAATCCACATTCGTCTCCCCACTCTTAGGGCCTAAGTGACTTTGGGGTTTCAGAAACTCTGGGAGGCTGATCCTCAACCCGACCCCAACCCAGCCTACCACAGCAGCACGAACGTGCTTTGGGAAGATGATCGTCTGGGTGGAGGGTGGAGGAGAAAGGTAGAATCCTGCAGAACTCAAAGAACGTTCCTGTGTACCCCCCACCACCCTCCAGGGATAAAAGAGCTGCTTCCCTCCCTCTTGGCATAAGCATCATTCCCTACAGAGACTGGCAGAGATCTGAAACCATGCAGGGAC s panTro4.chr3 13773372 940 - 202329955 taatgggcaactttatttgaatgtgtttttgcaaatgtgtactgttgatttatttgcatacatttaaaaaacctgtttgaaaggtaccatgtgataggtcttattctgtttcctcctttttatatttttaacacccaaccactttgcagtgtgacatctaattcaaggcgtctagtctctgcataataccccagggaagttctcatgcggacccatagggagcacatatgaagatg-ttatcactgtttgttttttatggtggcagggagttgaagatcacctgagtgcccattgcggggagaatggagtggtaaaatgtaacaaggtgcccatggtggggtattatgcagaactgagctctgcctcctacctgctcatgagatggggaattccttagatagagaaacaaggctgagatgctgaacagccaaacagaataactatgtccacAAGGCCCCTCCTCTCCCATA-AGGTCTGTACCCGCTGAACTGTGTGGGGGCTGTTCA-------AAGAACTTGAACTTTGTTAATAGTCACAGTTCAGAGATAACTGATACCCTGGGCATCACTGATAAAAGCCATTGTAAGAAGAAACAGCGTGGAACCAAAGAGAACACTTACTTTACCGGACAAAGGTATCTCCTGTTACAATCCACATTCGTCTTCCCACTCTTAGGGCCTAAGTGACTTTGGGGTTTCAGAAACTCTGGGAGGCTGATCCTCAACCCGACCCCAACCCAGCCTACCACAGCAGCACGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAGGGTGGAGGAGAAAGGTAGAATCCTGCAGAGCTCAAAGAACGTTCCTGTGTACCCCTCACCACCCTCCAGGGATAAAAGAGCTGCTTTCCTCCCTCTTGGCATAAGCATCATTCCCTACAGAGACTGGCAGAGATCTGAAACCATGCAGGGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13755532 941 - 202140232 taatgggcaactttatttgaatgtattcttgcaaatgtgtactgttgatttatttgcatacatttaaaaaatctgtttgaaaggtaccatgtgataggtcttattctgtttcctcctttttatatttttaacacccaaccatgttgcactgtgacatctaattcaaggcgtctagtctctgcataataccccagggaagttctcatgcagacccatagggagcacatataaagatg-ttatcactgcttgttttttatggtggcagggagttgaagatcacctgagtgcccattgcggggagaatggagtggtaaaatgtagcgaggtgcccatggtggggtattatgcagAACAGAGCTCTGCCTCCTACCTGCTAGtgagatggggaattccttagatagaggaacaaggcgcagatgctgaacagccaaacagaataactatgcccacAATGCCCCTCCTCTCCCATACAGGTGTGTACCCACTGAACTGTGTGGGGGCTGTTCA-------AAGAACTTAAACTTTGTTAATAGTCACAGTTCAGAGACAACTGATACCCTGGGCATCCCTGATAAAAGCCATTGTAAGAAGAAACAACGTGGAACCAAACAGAACACTTACTTTACCGGACAAAGGTATCTCCTGCTACAATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTTGGGGTTTCAGAAACTCTGGGAGGCTGATCCTCAACCCGACCCCAACCCAGCCTACCACAGCAGCAGGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAAGGTGTCGGAGAAAGGTAGAATCCTGCAGAGCTCAAAGAACGTTCCTATGTACCCCCCACCACCCTCCAGGGGTAAAAGAGCTGCTTCCCCCCATCTTGGCATAAGCATCATTCCCTGCAGAGACTGGCAGAGATCTAAAACCATGCAGGGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14312915 929 - 123690457 taatgggcaactttatttgaatgtgttcttgcagatgtgtactgttgatttatgtgcatacatttaaaaaatctgtttgaaaggtaccatgtgatagg-----------ttcctcctttttatatttttaacacccaaccatgttgcggtgtgacatctaattcaaggcgtctagtctctgcataataccccagggaagttctcacgcagacccatagggagcacatataaagatg-tgatcaccgcttgttttttatggtggcagggagttgaagatcacctgagtgcccattgcggggagaatggagtggtaaaatgtagcaaggtgcccatggtggggtattatgcagaactgagctctgcctcctacctgctcatgagatggggaattccttagatagaggaacaagactcagatgctgaacagccaaacagagtaactatgtccactaTGCCCCTCCTCTCCCATACACTTCTGTACCCGCTGAACTGTGTGGGGGCTGTTCA-------AAGAACTTGAACTTTGTTAATAGTCACAGTTCAGAGATAACTGATACCCTGGGCATCCCTGATAAAAGCCATTGTAAGAAGAAACAACGTGGCACCAAAGAGAATACCTACTTTACCGGACAAAGGTATCTCCTGCTACGATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTTGGGGTTTCAGAAACTCTGGGAGGCTGATCCTCAACCCGACCCCAACCCGGCCTACCACAGCAGCAGGAATGTGCTTTGGGAAGACAATCGTCTGGGTGGAGGGTGTAGGAGAAAGGTAGAATCCCGCAGAGCTCAAAGAACGTTCTTGTGTACCCC-CACCTCCCTCCAGGGGTAAAAGAGCTGCTTCCCTCCCTCTTGGCATAAGCATCATTCCCTGCGGAGACTGGCAGAGATCTGAAACCATGCAGGGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103596889 937 + 192599291 taatgggcaactttatttgaatgtgttcttgcaaatgtgtactgttgatttatgtgcatacattaaaaaaatctgtttgaaaggtaccgtgtgataggtcttattctgtttcctcctttttatatttttatcatccagctacgttgcggtgtgacatctaactcaaggcgtctagtctctgcataataccccagggaagttctcatgcagacccacagggagcacatataaagatg-ttaccactgcttgttttttatggtggcagggagttcaaggtcacctgagtgcccactgcggggagaatggagtggtaaaatgtagcaaggtgcccatgatggagtattatgcagaactgagctctgtctcctacctgctcatgagatggggaattccttagatggaggaacaaggctcagatgctgagcagccaaacagaataactatgtcccctacGCCCCTCCTCTCCCATACATGTCTGTACCCGCTGAACTATGTGGGGACTGTTTGGATAAACAAGAACTTGAACTTGGTTAATAGTCACAGTTCAGAGATAACTGATACCCCAGGCGTCTCTGATAAAAGCCATTGTAAGAAGAAATAATGTGGCACCAAAGAGAACACTTACTTTACTGGACAAAGGTATCTCCTGCTACAATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTCGGGATTTCAGAAACTCTGGGAGGCTGATCCTCAACCCG-----------GCCTACCACAGCAGCAGGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAGGGCATAGGAGAAAGGTAGAAACCTGCAGAGCTCAAAGAAACTTCCTGTGTACCCCCCACCACCCTCCAGGGGTAAAAGAGCTGCTTCCCTCCCTCTTGGCATAAGCATCTTTCCCTGCGGAGACTGGCAGAGATCTGAAACTGTGCAGGAAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103238232 937 - 192460366 taatgggcaactttatttgaatgtgttcttgcaaatgtgtactgttgatttatgtgcatacattaaaaaaatctgtttgaaaggtaccgtgtgataggtcttactctgtttcctcctttttatatttttatcatccaactacgttgcggtgtgacatctaactcaaggcgtctagtctctgcataataccccagggaagttctcatgcagccccacagggagcacatataaagatg-ttaccactgcttgttttttatggtggcagggagttcaaggtcacctgagtgcccactgcggggagaatggagtggtaaaatgtagcaaggtgcccatgatggagtattatgcagAACTGAGCTCTGTCTCCTACCTGctcatgagatggggaattccttagatggaggaacaaggctcagatgctgaacagccaaacagaataactatgtcccctacGCCCCTCCTCTCCCATACATGTCTGTACCCGCTGAACTATGTGGGGACTGTTTGGATAAACAAGAACTTGAACTTGGTTAATAGTCACAGTTCAGAGATAACTGATACCCCAGGCGTCTCTGATAAAAGCCATTGTAAGAAGAAATAATGTGGCACCAAAGAGAACACTTACTTTACTGGACAAAGGTATCTCCTGCTACAATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTCGGGATTTCAGAAACTCTGGGAGGCTGATCCTCAACCCG-----------GCCTACCACAGCAGCAGGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAGGGCATAGGAGAAAGGTAGAAACCTGCAGAGCTCAAAGAAACTTCCTGTGTACCCCCCACCACCCTCCAGGGGTAAAAGAGCTGCTTCCCTCCCTCTTGGCATAAGCATCTTTCCCTGCGGAGACTGGCAGAGATCTGAAACTGTGCAGGAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101034714 935 + 187378091 TAATGGGCAACTTTATTTGAATGTGTTCTTGCAAATGTGTACTGTTGATTTAtgtgcatacatttaaaaaatctgtttgaaAGGTACCGTGTGATAGGTCTTattctgtttcctcctttttatatttttatcatccaACTACGTTGCGGTGTGACATCTAACTCAAGGCGTCTAGTCTCTGCATAATACCCCAGGGAAGTTCTCATGCAGACCCACAGGGAGCACATATAAAGATG-TTATCACTGCTTGTTTTTTATGGTGGCAGGGAGTTCAAGGTCACCTGAGTGCCCACTGCGGGGAGAATGGAGTGGTAAAATGTAGCAAGGTGCCCATGATGGGGTATTATGCAGAACTGAG--CTGTCTCCTACCTGCTCATGAGATGGGGAATTCCTTAGATGGAGGAACAAGGCTCAGATGCTGAACAGCCAAACAGAATAACTATGTCCCCTACGCCCCTCCTCTCCCATACATGTCTGTACCCACTGAACTATGTGGGGACTGTTTGGAAAAACAAGAACTTGAACTTGGTTAATAGTCACAGTTCAGAGATAACTGATACCCCAGGCGTCTCTGATAAAAGCCATGGTAAGAAGAAATAATATGGCACCAAAGAGAACACTTACTTTACCGGACAAAGGTATCTCCTGCTACAATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTCGGGATTTCAGAAACTCTGGGAGGCTGATCCTCAACCCG-----------GCCTACCACAGCAGCAGGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAGGGCATAGGAGAAAGGTAGAAACCTGCAGAGCTCAAAGAAACTTCCTGTGTACCCCCCACCACCCTCCAGGGGTAAAAGAGCTGCTTCCCTCTCTCTTGGCATAAGCATCTTTCCCTGCGGAGACTGGCAGAGATCTGAAACTGTGCAGGAAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4902050 936 + 91754291 taatgggcaactttatttgactgtgttcttgcaaatgtgtactgttgatttatgcgcatacattaaaaaaatctgtttgaaaggtgccacgtgatcggtcttattctgtttcctcctttttctatttttatcatccaactacgttgcggtgtgacatctaattcaaggtgtctagtctctgcatagtaccccagggaagttctcatgcagacccacagggagcacatataaagatg-ttatcactgcttgttttttatggtggcagggagttcaaggtcacctgagtgcccactgcggggagaacggagtggtaaaatgtagcaaggtg-ccatgatggggtattatgcagAACTGAGCTCTGTCTCCTACCTGctcatgagatggggaattccttagatggaggaacaaggctcagatgctgaacagccaaacagaaaaacaatgtcccctacGCCGCTCCTCTCCCATACATGTCTGTACCCACTGAACTATGGGGGGACTGTTTGGAAAAACAATAACTTGAACTTGGTTAATAGTCACAGTTCAGAGATAACTGATATCCCGGGCGTCTCTGATAAAAGCCACTGTAAGAAGAAATAATATGGCACCAAAGAGAACACTTACTTTACCGGACAAAGGTATCTCCTGCTACAATCCACATTCATCTTCCCACTCTTAGGGCCTAAGTGACTTCGGGATTTCAGAAACTCTGGGAGGCTGATCCTCAACCCG-----------GCTTACCACAGCAGCAGGAATGTGCTTTGGGAAGACGATCGTCTGGGTGGAGGGCATAGGAGAAAGGTAGAAACCTGCAGAGCTCAAAGAAACTTCCTGTGTACCCCCCACCACCCTCCAGGGGTAAAAGAGCTGCTTCCCTCCCTCTTGGCATAAGCATCTTTCCCTGTGGAGACTGGCAGAGATCTGAAACTGTGCAGGAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92380146 942 - 98464013 caaagagcaactttatttgaatgtgttcttgcaaatgtgtactgttggtttatgtgcagacattt-aaaaatgtgtttgaaaggtactatgtgatagatcttattctgtttcctccttggtatagttttaacacccaaccatgttgcggtgtgacatctaattcaaggcgtctagtctctgcataataccccagggaggctctcatgtggacccagagggagcacatagaaagatgtttatcactgcatgtttgtcatggtgccagggagttaaaggtcacctgagtgcctattgcagggagaatggagtcgtgaaaagtagcagggtgcccacgatggggtattatgcagaactgagctctgcctcctacctgctcatgagatggggaattccttacacagaagaacaaggctcagatgctggagagccaggcagaatagctatgtccgccacGCCCCTCCTCTCCCGTACATGTCTGTACCCACGGAACTGCATGGGG-CTGTTCAGATAAACAAGAACTTGAGCTTTGTTTGCAGTTGAAGTTCGGGGATAACTGATACCCTGGGCATCCTTGACAAGTGCCATTGTAAGCAG---TAACCTGGCACCGAAGACAACACTTACTTTAACGGA-AAAGGCGTCTCCTGCTACACTCCGCATTCGTCTTCCCACTCTTAGGGTCCCAGTGACCTTGGGGTTTCAGAAACTCTGGGAGGCTGATCCTCAACCCG-ACCCAGCCCAGCCTACCACAGCAGCAGGAACGTGCTTTGAGAAGAGGATTGTCTGGGTGGAGGAGGTAGGAGAAAGGTAGAACCCTGCAGAGCTCAAGGAATCTTCCCATGTATCCCCCACCACCCTCCAGAGGTAAAAGAGCTGCTTCCCTCTCTCTTGGCATAAGCATCATTCCCTGTGGAGACTGGCAGAGATCTGAAACCAGGCAGGGAC i calJac3.chr15 C 0 C 0 e canFam3.chr34 24761802 124 - 42124431 I a score=5941910.000000 s hg38.chr3_KI270781v1_alt 24067 1939 + 113034 AGCTGTGGAGGCTGCTGTCAGTGGAGACCCAGGCTCAGAGACCCAGCCCAGCCGGTAGTAAGAGCGT----CCCCCATGGCGATGGCAGCACTCCAGGCCACCTGAGGTCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCCCTGGGAGCTGTGGAGGGTGGCGAGTGTGGGATCAGTGCCCAGCCGTCAGCACGGGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCACAAGGACTGATTCTTGGGCCGGTGAGATTCCAGAGTCTCCCTCAGCGCAGGTGCTGAAgggaaactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcgtcagaatgtggatgctcctgtgaatcagactggacttgtagttccaggccgcagagtcctggCATGCGGGCACCATGGTCATAATGATGATCTTCATTGCCATGGCACACACCATTCCCATGTATCAGCTTTATGCCTGGGCAGAGCAGACGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCACCTCCTGCTGCCC-CGGGAAGCACTTACCTGAGTGGTGAGTCCACCTGTCTACTCA---TTGGACCGCCGTTATGCTCCAGGCAGGATAGAAGAGGCAGTGGTTCCCTGCCTGTGACGAGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTAACCAAGGG---------TAGAGGTATCAGCAGCAGGTACCTGTGGAAGAGACAGAGAAAGC-GGTTGTCTCCTTAATATCATCCTTGCTAAGTTCTTTCATCCTCCAAGGACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCTTGAGGAACTGGTCTTACTTGGAA--TGCTGGGGCA-GCCGGTCACCGGGTTTGGGATTCTTCCTGTGGAGCGTGGAGCGGCTGTGATCCACCA-AGGCAACTAGCGGTGC------ACGGAGCTGGGCAGGGTGGCCAAGGCCTTGGCCGTTGATGTAGGTGTTCGAGGCACGGATGGCCTGTTGATCTATGTGCAGCTGCTGCGGCTGTGTGTGTTGATGCG--TCCCACCCACCAAAGGCCCCAAGCTTCCTCTCCACCTTCTGCTGGCACCGTCTGCAGCCTCTGACAGCATAGATACTCTTCCTGGGGT-GGG--GGCTTGGGGGGCAG--GTGCCCCAGGATG--CAGTGAT--AGAGTTCCAGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGGGGCTGTTCAGGCT--GAGCTGTCCT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCCATCATAGACCTTTAAGCGTGCCCC-CAGATGGACAGGCTGAAGTCCCCTTGA----CCCACAGTTTGGCTTTCTATCCCTGC----AGCCATGTCCTCATTTTCTGGGGCTGGTCAGCTCCTGGTATGGCTTCAGGACCTGTCCACAAGTCTGC-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACGGAGACACTCTTCTGACAGGTTTGGGTGGTCCAAAGGATGAGTTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGTGGGGAGCGGGCACCTGGGCGAGTCTTCCCAGTTTTCACTGCTGTGATTGCTATGAGGATGTGTATGAAGCAGGGTTTGTGACAGGCCAAATCTGCACAGGG-CCCACCATCCACAAAGTGCTTGTATGCCTGCATTCTC-----------------------------TTGGTC-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAGCCATGT---CTGACT-----------------------------------TCAGGGGTGCAG---------------ATGCTGG--------GTTGGTAGAAGACCCTTCTGTCCCTCTCT-------------------------------------------GCAGAGT----------------------------------------------TGAGTAACCTGC----------------------------------CTGCACATGAGGT-----------GGTTGGAGACTTCTTAT--------------------------CTTTTCTTTAGTTT--TTAACAtaaactttattattgaagcata-----------------------acataaatacagagaagagcacaaatcacg s panTro4.chr3 13774312 1939 - 202329955 AGCTGTGGAGGCTGCTGTCAGTGGAGACCCAGGCTCAGAGACCCAGCCCAGCCGGTAGTAAGAGCGT----CCCCCATGGCGATGGCAGCACTCCAGGCCACCTGAGGTCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCCCTGGGAGCTGTGGAGGGTGGCAAGTGTGGGATCAGTGCCCAGCTGTCAGCACGGGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCACAAGGACTGATTCTTGGGCCGGTGAGATTCCAGAGTCTCCCTCAGCACAGGTGCTGAAgggaaactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcgtcagaatgtggatgctcctgtgaatcagactggacttgtagttccaggccgcagagtcctggCGTGTGGGCACCATGGTCATAATGATGATCTTCATTGCCATGGCACACACCATTCCCATGTATCAGCTTTATGCCTGGGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCGCCTCCTGCTGCCC-CGGGAAGCACTTACCTGAGTGGTGAGTCCACCTGTCTACCCA---TTGGACCGCCGTTATGCCCCGGGCAGGATAGAAGAGGCAGTGGTTCCCTGCCTGTGATGAGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTAACCAAGGG---------TAGAGGTACCAGCAGCAGGTACCTGTGGAAGAGACAGAGAAAGC-GGTTGTCTCCTTAATATCATCCTTGCTAAGTTCTTTCATCTTCCAAGGACAAAACAGATGGTG-----------AGGAAGAACAGGGCGGACCTTGAGGAACTGGTCTTACTTGGAA--TGCTGGGGCA-GCCGGTCACCGGGTTTGGGATTCTTCCTGTGGAGCGTGGAGCGGCTGTGATCCACCA-AAGCAACTAGCGGTGC------ACGGAGCTGGGCAGGGTGGCCAAGGCCTTGGCCGTTGATGTAGGTGTTCGAGGCACGGATGGCCTGTTGATCTATGCGCAGCTGCTGCGGCTGTGTGTGTTGATGCG--TCCCACCCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGACAGCATAGATACTCTTCCTGGGGT-GGG--GGCTTGGGGGGCAG--GTGCCCCAGGATG--CAGTGAT--AGAGTTCCGGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGGGGCTGTTCAGGCT--GAGCTGTCCT----TCTGTCCTTAGCCTGCATCTTTCTTTT-TGGCCCCATCATAGACCTTTAAGCATGCCCC-CAGATGGACAGGCTGAAGTCCCCTTGA----CCCACAGTTTGGCTTTCTATCCCTGC----AGCCATGTCCTCGTTTTCTGGGGCTGGTCAGCTCCTGGTATGGCTTCAGGACCTGTCCACAAGTCTGC-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACGGAGACACTCTTCTGACAGGTTTGGGTGGTCCAAAGGATGAGTTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGTGGGGAGCGGGCACCTGGGCGAGTCTTCCCAGTTTTCACTGCTGTGATTGCTATGAGGATGTGTATGAAGCAGGGTTTGTGACAGGCCAACTCTGCACAGGG-CCCACCATCCACAAAGTGCTTGTATGCCTGCATTCTC-----------------------------TTGGTC-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAGCCATGT---CTGACT-----------------------------------TCAGGGGTGCAG---------------ATGCTGG--------GTTGGTAGAAGACCCTTCTGTCCCTCTCT-------------------------------------------GCAGAGT----------------------------------------------TGAGTAACCTGC----------------------------------CTGCACATGAGGT-----------GGTTGGAGGCTTCTTAT--------------------------CTTTTCTTTAGTTT--TTAACAtaaactttattatcgaagcata-----------------------acataaatacagagaagagcacaaatcacg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13756473 1970 - 202140232 AGCCGTGGAGGCTGCTGTCAGTGGAGACCCAGGCTCAGAGACCCAGCCCAGCCAGCAGTAAGAGGGT----CCCCCATGGTAATGGCAGCACTCCAGGCCACCTGAGGTCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCCCTGGGAGCTGTGGAGGGCGGCAAGTGTGGGATCAGTGCCCAGCCATCAGCACGGGCAACACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCACAAGGACTGATTCTTGGGCCGGTGAGATTCCAGAGTCTCCCTCAGTGCAGGTGCTGAAgggaaactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcattaaaatgtggatgctcctgtgaatcagactggacttgtagttccaggccacggagtcctggCGTGCCGGCACCATGGTCATAATGATGATCTTCATTGCCATGGCACACACCGTTCCCATGTATCAGCTTTATGCCTGGGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCACCTCCTGCTGCCC-CGGGAAGCACTTACCTGAGCGGTGAGTCCACTTGTCTACCCA---TTGGACCGCCGTAATGCCCCAGGCAGGATAGACAAGGCAGTGGTTCCCTGCCTGTGACGAGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGGG---------CAGAGATACCAGCAGCAGGTACCTGTGGAAGAGACGGAGAAAGC-GGTTGTCTCCTTAATATCATCCTTGCTAAGTTCTTTCATCCTCCAAGGACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCCTGAGGAACTGGTCTTACCCGGCA--TGCTGGTGCA-GCCGATCACCAGGTTTGGGATTCTTCCTGTGGAGCATGTAGTGGCTGTGATCCACCA-AGGCGACTAGTGGTGC------ACAGAGCTGGGCAGGGTGGCCAAGGCCTTGGCCGTTGTTGTAGGTGTTCGAGGCACGGATGGCCTGTTGATCCGCACCCAGCTGCTGCGGCTGTGTGTGATGATGTG--TCCCACCCACCTAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGGCAGCATAGATACTCTTCCTGGGGT-GGG--GGCTTTGGGGGCAG--GTGCCCCAGGATG--CAGTGATAGAGAGTTCCAGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGGGGCTGTTCAGGCC--AAGCTGTCTT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCCATCATAGACCTTTGAGCATGCCCC-CAGATGGACAGGCTGAAGTGCTCTTGA----CCCACAGTTTGGCTTTCTATCCCTGC----AGCCATGTCCTCGTTTTCTGGGGCTGGTCAGCTCTTGGTATAGCTTCAGGACCTGTCCACAAGTCTGC-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTTAAAAATGGAGACGGAGACACTCTTCTGACAGGTTTGGGTGGTCCAAAGGATGAGTTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGTGGGGAGTGGGCACCTGGGCGAGTCTTCCCAGTTCTCACTGCTGTGATTGCTATGAGGATGTGTATGAAGCAGGGTTTGTGACGGGCCAAGTCTGCACAGGG-CCCACCATCCACAACGTGCTTGTATGCCTGCAGTATCTTGGTCCTTTTTGAAAACATTGCTAACAGTTGGTC-CTTTTTGAAAACATTGCTAACAGATCAAAATCCAAAAGCGACCACAGCCATGT---CTGACT-----------------------------------TCTGGGGTGCAG---------------ATGCTGG--------GTGGGTAGAAGACCCTTCTGTCCCTCTCT-------------------------------------------GCGGAGT----------------------------------------------TGAGTAATCTGC----------------------------------CTGCACATGAGGT-----------GGTTGGAGGCTTCTTAT--------------------------CTTTTCTTTAGttt--ttaatataaaccttattattgaagcata-----------------------acataaatacagagaagtgcacgaatcatg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14313844 1922 - 123690457 AGCCGTGGAGGCCACTGTCAGTGGAGACCCAGGCTCAGAGACCCAGCCCAGCCAG--------------------CATGGCAATGGCAGCACTCCAGGCCACCTGAGGGCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCCCTGGGAGCTGTGGAGGGTGGCAGGCATGGGATCAGTGCCCAGCCGTCAGCACGGGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCTCAAGGACTGATTCTCGGGCCGGTGAGATTCCAGAGTCTCCCTCAGTGCAGGTGCTGAAgggaaactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcgttaaaatgtcgatgctcctgtgaatcagactggacttgtagttccaggccacggagtcctggTGTGCCGGCACCATGGTCACAATGATAATCTTCATTGCCACGGCACACACCATTCCCATGTATCAGCTTTATGCCTGGGCAGAGCAGAGGGGTGTGGCTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGTGCCTCCTGCTGCCC-CTGGAAGCACTTACCTGAGCGGTGAGTCCACCTGTCTACCCA---TTGGACTGCCATTATGCCCCGGGCAGGATAGAAGAGGCAGTGGTTCCCTGCCTGTGACAAGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGTG---------TAGAGGCACCAGCAGCAGGTACCTGTGGAAGAGACAGAGAAAGCGGGTTGTCTCCCTAATATCATCCTTGCTAAGTTCTTTCATCCTCCAAGGAC-AAACAGATGGTG-----------AGGA--GACAGGGAGGACCCTGAGGAACTGGTCTTACTTGGCA--TGCTGGGGCA--CCGGTCACTGGGTTTGGGATTCTTCCTGTGGAGCGTGTAGTGGCTGTGATCCACCA-AGGCGACTAGCGGTGC------ATGGAGCTGGGCAGGGTGGCCAAAGCCTTGGCCGTTGATGTAGGTGTTCGAGGCACGAATGGCCTGTTGATCCACGCCCAGCTGCTACGGCTGTGTGTGATGATGCG--TCCCACCCACCGAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGGCAGCATAGATACTCTTCCTGGGGT-GGG--GGCTTCGGGGGCAG--GTGCCCCAGGATG--CAGTGATAGAGAGTTCCAGAGGCTCAGGGCTGGGAT-GGGCTGCAGGATGGGGCTGTTCAGGCC--GAGCTGTCCT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCCATCACAGACCTTTGAGCATGCCCC-CAGATGGACAGGCTGAAGTGCCCTTGA----CCCACAGTTTGGCTTTCTATCCCTGC----AGCCATGTCCTCGTTTTCTGGGGCTGGTCTGCTCCTGGTATGGCTTCAGGACCTGTCCACAAGTCTGT-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGGCGGAGACACTCTTCTGACAGGTTTGGGTGGTCCAAAGGATCAATTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGTGGGGAGCGGGCACCTGGGTGAGTCTTCCCAGTTCTCACTGCTGTGATTGCTATGAGGATGTGTGTGAATCAGGGTTTGTGACGGGCCAAGTCTGCACAGGG-CCCACCATCCACAACGTGCTTGTATGCCTGCATTCTC-----------------------------TTGGTC-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCAGAGCCATGT---CTGACT-----------------------------------TCTGGGGTGCAG---------------ATGCTGG--------GTGGGTAGAAGACCTTTCTGTCCCTCTCT-------------------------------------------GCGGAGT----------------------------------------------TGAGTAACCTGC----------------------------------CTGCACATGAGGT-----------GGTTGGAGCCTTCTTAT--------------------------CTTTTCTTTAGttt--ttaatataaactttattattgaagcata-----------------------acataaatacagagaagtgcacaaatcacg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103597826 1906 + 192599291 AGCCGTGGAGGCCGCTGTCTGTAGAGACCCAGGCTCAGAGACCCAGCTCAGCCAGCAGTAGGAGGGG----CCCCCATGGCGATGGCGATGCTCCAGGCCACCTGAGGGCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCTCTGGGAGCTGTGGAGGGCAGCAGGCATGGGATAAGTGCCAAGCTGTCAGCATGAGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCGCGAGGACTGATTCTTGGGCCAGTGAGATTCCAGAGTCTCCCTCAGTGTAGGTGCTGAAgggagactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcattaaaatgtgcatgctcctgtgaatcagactggacttgtagtttcaggccgcggagtcctggTGTGCCGGCACCATGGT---------------------------ACACACTGCTCCCAAGTGTCAGCTTTATGCCTGAGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCACCTCCTCCTGCCC-CTGGAAGCACTTACCTGACTGGTGAGTCCA-CTGTCTACCCA---TTGGATCGCCATTATGCCCCGGGCAGAATAGAAG-GGCAGTGGTTCCCTGCCTGTGATGGGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGGG---------CAGAGGTACCAGCAGCAGGTACCTGTGGAAGAGACAGAGAAAGC-AGTTGTCTCTTTAATATGATCCTTGCTAAGTTCTCTCATCCTC-----ACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCCTAAGGAACTGATCTTACTCGGCA--TGCTGGAGCA-GCCGGTCACTGAGTCTGGGATTCTTCCTGTGGAGTGTGGAGTGGCTGTGATTCACCA-AGGCGACTAGCAGTGC------ATGGAGCTGGGCAGGGCAGTCAAGGCCTTGGCCGTTGATATAGGTGTTCGAGGCACGGTTGGCCTGTTCATCCGCTCCCAGCTGCAGTGGGTGTGTGTGATGATGCG--TTCCACCCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGGCAGCACAGATAGTCTTCCTGGAGTAGGG--GGCTTGGGGAGTAG--GTGCCCCAGGATG--CAGTGATGGAGAGTTCCAGAGGCTCAGGGCTGTGGT-GGGCTGCAGGATGTGGCTGTTCAGGCC--GAGTTGTCCT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCCACCATAGACCTTTGAGCATGCCTC-CAGATGGACAGGCTGAAGTGCCCTTGA----CCCACACTTTGACTTTCTGTCCCTGC----AACCATGTCCTTGTTTTCTGGGACTGGTCAGCTCCTGGTATGACTTCAGGACCTGTCCACGAGTCTGT-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACAGAGACACTCTTTTGACAGGTTTGGGTGGTCCAAAGGATGAGCTGCTGTGGAGAGGTGGAGGGAGTAAGGGCAGGCCAGGGGG-AGCGGGCACCTGGGCGAGTCTTCCCAGTTCTCACTGCTGTGATTGCTACGAGGATGTGTATGAAGCAGGGTTTGTGATGGGCCAAGTCTGCACAGGG-CCCACCATCCATAACGTGCTTGTATGCCTGCATTCTT-----------------------------TTGGTT-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAGCCACGT---CTGACT-----------------------------------TCT-GGGTACAG---------------ATGCTGG--------GTGGGTAGAAGACCCTTCTGCTCCTCTCT-------------------------------------------GTGGAGT----------------------------------------------TGAGTGACCCGC----------------------------------CTGCACATGAGGT-----------GGCTGAAGGCTTCTTAT--------------------------CTTTTCTTGAGttt--ttaatataaacttttttattgaagcata-----------------------acataaatatagagaagtgcacaaatcatg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103239169 1907 - 192460366 AGCCGTGGAGGCCGCTGTCTGTAGAGACCCAGGCTCAGAGACCCAGCTCAGCCAGCAGTAGGAGGGG----CCCCCATGGCGATGGCGATGCTCCAGGCCACCTGAGGGCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCTCTGGGAGCTGTGGAGGGCAGCAGGCATGGGATAAGTGCCAAGCTGTCAGCATGAGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCGCGAGGACTGATTCTTGGGCCAGTGAGATTCCAGAGTCTCCCTCAGTGTAGGTGCTGAAgggagactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcattaaaatgtgcatgctcctgtgaatcagactggacttgtagtttcaggccgcggagtcctggTGTGCCGGCACCATGGT---------------------------ACACACTGCTCCCAAGTGTCAGCTTTATGCCTGAGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCGCCTCCTCCTGCCC-CTGGAAGCACTTACCTGACTGGTGAGTCCACCTGTCTACCCA---TTGGATCGCCATTATGCCCCGGGCAGAATAGAAG-GGCAATGGTTCCCTGCCTGTGATGGGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGGG---------CAGAGGTACCAGCAGCAGGTACCTGTGGAAGAGACAGAGAAAGC-AGTTGTCTCTTTAATATGATCCTTGCTAAGTTCTCTCATCCTC-----ACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCCTAAGGAACTGATCTTACTCGGCA--TGCTGGAGCA-GCCGGTCACTGAGTCTGGGATTCTTCCTGTGGAGTGTGGAGTGGCTGTGATTCACCA-AGGCGACTAGCAGTGC------ATGGAGCTGGGCAGGGCAGTCAAGGCCTTGGCCGTTGATATAGGTGTTCGAGGCACGGTTGGCCTGTTCATCCTCTCCCAGCTGCAGTGGGTGTGTGTGATGATGCG--TTCCACCCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGGCAGCACAGATAGTCTTCCTGGAGTAGGG--GGCTTGGGGAGTAG--GTGCCCCAGGATG--CAGTGATGGAGAGTTCCAGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGTGGCTGTTCAGGCC--GAGCTGTCCT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCCACCATAGACCTTTGAGCATGCCTC-CAGATGGACAGGCTGAAGTGCCCTTGA----CCCACACTTTGACTTTCTGTCCCTGC----AACCATGTCCTTGTTTTCTGGGACTGGTCAGCTCCTGGTATGACTTCAGGACCTGTCCACGAGTCTGT-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACAGAGACACTCTTTTGACAGGTTTGGGTGGTCCAAAGGATGAGCTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGGGGG-AGCGGGCACCTGGGCGAGTCTTCCCAGTTCTCACTGCTGTGATTGCTACGAGGATGTGTATGAAGCAGGGTTTGTGATGGGCCAAGTCTGCACAGGG-CCCACCATCCATAACGTGCTTGTATGCCTGCATTCTT-----------------------------TTGGTT-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAGCCACGT---CTGACT-----------------------------------TCT-GGGTACAG---------------ATGCTGG--------GTGGGTAGAAGACCCTTCTGCTCCTCTCT-------------------------------------------GTGGAGT----------------------------------------------TGAGTGACCCGC----------------------------------CTGCACATGAGGT-----------GGCTGAAGGCTTCTTAT--------------------------CTTTTCTTGAGttt--ttaatataaacttttttatggaagcata-----------------------acataaatatagagaagtgcacaaatcatg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101035649 1907 + 187378091 AGCCGTGGAGGCCGCTGTCTGTAGAGACCCAGGCTCAGAGACCCAGCTCAGCCAGCAGTAGGAGGGG----CCCCCATGGCGATGGCGATGCTCCAGGCCACCTGAGGGCAAGAGGGCT-CCACCCAGCCAGCTGCAGATTCTCTGGGAGCTATGGAGGGCAGCAGGCATGGGATAAGTGCCAAGCTGTCAGCATGAGCAATACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCGCGAGGACTGATTCTTGGGCCAGTGAGATTCCAGAGTCTCCCTCAGTGTAGGTGCTGAAGGGAGACTCTGCAAGACCCTAAGAGCCTCTGTGATCAGGTGGGGGCTAAGAGGCATTAAAATGTGGATGTTCCTGTGAATCAGATTGGACTTGTAGTTTCAGGCCGCGGAGTCCTGGTGTGCCGGCACCATGGT---------------------------ACACACTGCTCCCAAGTGTCAGCTTTATGCCTGAGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCgcctcctcctgccc-ctggaAGCACTTACCTGACTGGTGAGTCCACCTGTCTACCCA---TTGGATCGCCATTATGCCCTGGGCAGAATAGAAG-GGCAGTGGTTCCCTGCCTGTGATGGGTCCCTGGGCTCTTCTCCTCAGGGCAAGTGGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGGG---------CAGAGGTACCAGCAGCAGGTACCtgtggaagagacagagaaagc-agtTGTCTCTTTAATATGATCCTTGCTAAGTTCTCTCATCCTC-----ACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCCTAAGGAACTGATCTTACTCGGCA--TGCTGGAGCA-GCCGGTCACTGAGTCTGGGATTCTTCCTGTGGAGTGTGGAGTGGCTGTGATTCACCA-AGGCGACTAGCAGTGC------ATGGAGCTGGGCAGGGCAGTCAAGGCCTTGGCCGTTGATATAGGTGTTCGAGGCACGGTTGGCCTGTTCATCCGCTCCCAGCTGCAGTGGGTGTGTGTGATGATGCG--TTCCACCCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCAGCCTCTGGCAGCATAGATACTCTTCCTGGAGTAGGG--GGCTTGGGAAGTAG--GTGCCCCAGGATG--CAGTGATGGAGAGTTCCAGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGTGGCTGTTCAGGCC--GAGCTGTCCT----TCTGTTCTTAGCCTGCACCTTTCTTTT-TGGCCCCACCATAGACCTTTGAGCATGCCTC-CAGATGGACAGGCCGAAGTGCCCTTGA----CCCACACTTTGACTTTCTGTCCCTGC----AACCATGTCCTTGTTTTCTGGGACTGGTCAGCTCCTGGTATGACTTCAGGACCTGTCCACGAGTCTGT-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACAGAGACACTCTTTTGACAGGTTTGGGTGGTCCAAAGGATGAGCTGCTGTGGAGAGGTGGAGGGAGTAAGGGCGGGCCAGAGGG-AGCGGGCACCTGGGCGAGTCTTCCCAGTTCTCACTGCTGTGATTGCTACGAGGATGTGTATGAAGCAGGGTTTGTGATGGGCCAAGTCTGCACAGGG-CCCACCATCCATAACGTGCTTGTATGCCTGCATTCTT-----------------------------TTGGTT-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAACCACGT---CTGACT-----------------------------------TCT-GGGTACAG---------------ATGCCGG--------GTGGGTAGAAGACCCTTCTGTTCCTCTCT-------------------------------------------GTGGAGT----------------------------------------------TGAGTAACCTGC----------------------------------CTGCACATGAGGT-----------GGCTGAAGGCTTCTTAt--------------------------cttttcttgagttt--ttaatataaacttttttaTTGAAGCATA-----------------------ACATAAATATAGAGAAGTGCACAAATCATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4902986 1910 + 91754291 AGCCGTGGAGGCTGCTGTCTGTGGGGACCCAGGCTCAGAGACCCAGCTCAGCCAGCAGTAGGAGGGG----CCCCCATGGCGATGGCGATGCTCCAGACCACCTGAGGGCAAGAGGGCT-CCACCCAGCCAGCTGCAGCTTCTCTGGGAGCTGTGGAGGGCAGCAGGCATGGGATAAGTGCCAAGCTGTCAGCATGAGCAACACCTTTGCACCTGACCAGCAACCCACTGCCAGAGCAGCCGCGAGGACTGATTCTTGGGCCAGTGAGATTCCAGAGTCTCCCTCAGTGTAGGTGCTGAAgggagactctgcaagaccctaagagcctctgtgatcaggtgggggctaagaggcattaaaatgtggatgctcctgtgaatcagactggacttgtagtttcaggccgcggagtcctggTGTGCCGGCACCATGGT---------------------------ACACACCGTTCCCAAGTGTCAGCTTTATGCCTGAGCAGAGCAGAGGGGTGTGACTGAAGGCACAAGGG-CAAAATGCCATTATTGAGGCGCCTCCTCCTGCCC-CTGGAAGCACTTACCTGAGTGGTGCGTCCACCTGTCTACCCA---TTGGACCGTCATTATGCCCC-GGCAGAATAGAAGAGGCAGTGGTTCCCCACCTGTGATGGGTCCCTGGGCTCTTCTCCTCAGGGCAAGTCGTCCTGCCCTG-CTGGAATTGTGTCTTACCAAGGG---------CAGAGGTACCAGCAGCAGGTACCTGTAGAAGAGACAGAGAAAGC-AGTTGTCTCCTTAATATGATCCTTGCTAAGTTCTCTCATCCTCCCAGGACAAAACAGATGGTG-----------AGGAAGAACAGGGAGGACCCTAAGGAACTGATCTTACTTGGCA--TGCTGGAGCA-GCCGGTCACTGAGTCTGGGATTCTTCCTGTGGAGTGTGGAGTGGCTGTGATTCACCA-AGGCGACTAGCAGTGC------ATGGAGCTGGGCAGGGCAGTCAAGGCCTTGGCCGTTGATGTAAGTGTTCGAGGCACGGTTGGCCTGTTCATCCGCACCCAGTTGCAGTGGGTGTGTGTGATGATGCG--TTCCACTCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGGCACCGTCTGCCGTCTCTGGCAGCATAGATACTCTTCCTGGAGTAGGG--GGCTTGGGGAGTAG--GTGCCCCAGGATG--CAGTGATGGAGAGTTCCAGAGGCTCAGGGCTGGGGT-GGGCTGCAGGATGGGGCTGTTCAGGCC--AAGCTGTCCT----TCTGTCCTTAGCCTGCACCTTTCTTTT-TGGCCCTACCATAGACCTTTGAGCATGCCTC-CAGATGGACAGGCTGATGTGCCCTTGA----CTCACACTTTGACTTTCTGTCCCTGC----AGCCACGTCCTTGTCTTCTGGGACTGGTCAGCTCCTGGAATGACTTCAGGACCTGTCCACGAGTCTGT-CACCTCACTGTGTGAAGGTGGCTTC-AGACCTCTCTGGAAAGTCAAAAATGGAGACAGAGACACTCTTTTGACAGGTTTGGGTGGTCCAAAGGATGAGCTGCTGTGGAGAGGTGGAGGGAGTAAGGGCAGGCCAGTGGACAGCGGGCACCTGGGCAAGTCTTCCCAGTTCTCACTGCTGTGATTGCTACGAGGATGTGTATGAAGCAGGGTTTGTGATGGGCCAAGTCTGCACAGGG-CCCACCATCCATAACGTGCTTGTATGCCTGCATTCTC-----------------------------TTGGTT-CTTTTTGAAAACATTGCTAACAGGTCAAAACCCAAAAGCGACCACAGCCATGT---CTGACT-----------------------------------TCT-GGATACAG---------------ATGCTGG--------GTGGGTAGAAGACCCTTCTGTTCCTCTCT-------------------------------------------GTGGAGT----------------------------------------------TGACTAACCTGC----------------------------------CTGCACATGAGGT-----------GGCTGAAGG---CTTAT--------------------------CTTTTCTTGAGttt--ttaatataaacttttttattgaagcata-----------------------acataaatatagagaagggcacaaatcatg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92381088 1867 - 98464013 AGCCGTGGAGGCCGCGGTTGGTGGAGACCCAGGCTCAGAGACCCAGCCCAGCCAGCAGTAAGAGAGG----CCCCCATGGCGATGGCAATGCTCCAGGCCACCTGAGGGCAGGAGGGCT-CCACCCAGCAGGCTGCAGCTTCCCTGGGAGTTGCGGAGGGCGGCAGCCATGGGATCAGCGCCCAGCCCTCAGCACAGGCAGCACTTCTGCACCTGACCAGCCACCCACTGCCAGAGCAGCCACGAGGACTGATTCTTGGGC-----AGCTTTCAGAGTCTTCCTCAATGCAGGCACTGAAGGGAAACTCTGCCAGACCCTGGGAGCCTCTGTGATCAGATGGGGGCTAAGAGGTGTTA-AATGTAGACGCTCCTATGAGTCAGACCGGACTTGTA-TTCCAGGCCTCGGAGTCCTGGTGTGCAGGCATCATGGTCATAATGATGAGCTTAATTGCCATGACACACACCGTTCCCATGTATCAGCTCTATGCCTGCACAGAGAGGAGGGATGTGACTGAAGGCACAGGAG-CAAAGTGCCATTATTGAGGTG-CTCCTCCTGACC-GCAGAAGCACTTACCTGAGCCATGAGTCC-CCTGCCTACCCT---TTGGACCGCCATGATGCACCGGGCAGGGTAGAAGAGGCAGTGGTACC-----------GAGTCCCTGAG---TTCTGCTCAGAGCGA---GTCTTACCAAGACTGGAATGGTGTCTTACCAAGGG---------CAGAGGTAGCAGCAGCAGGTACCTGTGGAAGAGCCAGAGAAAGC-GGTTGTCTCCTTTGTATCATCCTTGCTAAGTTCTCCCATCCTCCAAGGATGAAACAGATGGCA-----------AGGAGGAACGGGGAGGACACTGGGGAACTG-TCTTACTTCACA--TACTGGGGCA-GCCAGTCACTGGGTGTGGAATTCTTCCTGTGGGGTGTGGGGTGGCTGTGATGTAC---------CCCGAGGCAC------ATGGAGCTGGGCGGGGCAGCCAAGG-CTTGGCCATTGATGTAGGTGTTCAAGGCGTGGCTGGCCTGTTGATCGGCGCCCA-------CGGCTGTGTGTGATGATGCA--CCCCACTCACCAAAGGCCCCAAGCTTCCTCACCACCTTCTGCTGACACTGTCTGCAGCCTCTGGCAGCAGAGATACTCTTCCTGGGGT-GGG--GGACTAGAGA-CAC--CTGCCCCAGGCCA--TAGTGTTGGAGAATTCCA---------GGCTGAGGT-GGGCTGCAGGATAGGGCTGTTCAGGCC--AAGCTGTCTTTCTGTCTGTCCCGAGGCTGCACCTTTCTTTTCTGGCCCCATCACAGATCTTCGAGCATGCCCCGCAGATGGACA--CTGAAGCGCCCTTGA----CCGACAGTGTGGCTTTCTATCCCTGC----AGAAGTGTTCTTGTTCTCCAGG-CTGGCCAGCTGCTGGTATAGCTTCAGGACCT--------GTCTGT-CACCTCACTGTGTGGAGGTGGCTTC-AGACCTCTCTGGAAGGTTAAAAATGGAGATGGAGACACTCTTCTGACAGGTTTGGGTGGTCCATAGGATGAGCTGCTGCGGAGAAGTGGACAGAGTAAGGGCGAGCCAGTGGGAAGCGGGCGCCTGGACGAACCTTCCCA-TTCTCACTGTTGTGGTCACTAGAAGGATGTGT------CAGGGCTTGTGACCGGCCATGTCTTCACAGGACCCCCCCATCAACACCATGCTTATACACCTGCATTCTC-----------------------------TTGGTCGTTTTTTTAAAACATTGCTAACAGGTCAAAACCCAAAGGTGACCACAGCCATGT---CTGACT-----------------------------------TCTGGGGTACAG---------------ATGCTGG--------GTGGG----AGACCCCTCTG--CCCCTCT-------------------------------------------GCAGAGT----------------------------------------------CGTGCAGCCTGC----------------------------------CTGCATGTGAGGT-----------GGCTGACGGCT-----T--------------------------CTTTTCTTTCAttt--ttaatgtaaacttt-taattgaagcata-----------------------acataaatacagagaagtgcacaaatcgcg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24761926 2091 - 42124431 AGCTGTCAAGGCCATTGTCTGTGGGCTCTCAGCCCCAGAAACCCAGAACAGCTGGCAGCAAAAGTGGATCTCCTCCATG---ATGACAACACCACAGGCCAAGTGAGGGCAGGAAGGCTGTGATCCAGGT-GCTGCGGCTTTTCAGGGGGCTACTGAGGGCAAGAGCTGTACAATGAGTGCCCAGCGAGCAGCATGGACAGTATGTCTGCAGCTGACCAGCGACATGCTGCCAGGGTAACC---AGAACTGATTCTTGGGC-AGCAAGATTCCATAATCATCCTTAATGTAGGAGCTGAAGGGAAATTCTGCAAGATTCTAAGGCCCTCTGTGAAAAAGCAAAGACTAAGACCCATTAGAATATAGATGCTCAGGTAAATCAGACTGGACTGATAGCCCCAGGCTGGTGAAACCTGGTGTATTGGTACCACAGTCATAATAACAAACACAACCGTCATGCTGTGTACCTTCCTCACACATTAGCT-TATACCTGGGCAGAACAGA--GGCATGAATGACAGCACGGGGACCAAAGAAGTATTATCAAGGCACCCTCTTCTGTCCTCTGTGAGCACCTACCTGAAAGGTGAGCCCACCTAGTCAGCCATCGTTGGGCTGTCCTCACCCTCCTGGCAACGTAGAAAGTGCA-TGG--CATTTCCTGTGAGAAGT-CCTAGGCACTTCCCATCAGGGTGG--CATCCTGCCCTA-TGGGGACCACGTCCTACCAAGAGACATGAGGACAGAGGTGGTGGCAGCAGGTGCCTGTGGAAGAGGGGGAGGAAGC-TGTTG-CTTCTCACTGACGTCCTTACTAAGTTCTTCTGTCCTCCAACGAC-AAGCAGATGGTGACAGGGGAGACAGGGGTGACAGGGGAGGGCCTGAGGGGCTGCTCTCCCTCTCCACGTGCTGGGATAAGCAGATCACTGTGTCTAGTATTCTTCCTGCTGAGCTCGTGGTGGCTGTAATGAAACACACATGGCTAGTGCAGCAGCACGATGAAGCTGGGCCAGGCAG-CAAGACCATGGCC-----------------------------------------TGCCCGGTCACTGTAGCCATGTGTGATGATGTGCCTTCCAGCCACGGGAGACCCGGGGTTTCCTCACTACCTTCTGCTGGCACTGCCTCCAGCCTCTGGCACTATGGTTGCTCCTCCCAGCAAAGGGCAGGTTCCAGGTACCACCATGCCCCAGGGGGCCCAGTGA---AGAGCTCGAGACCCTCGAGGCAGAGGTCACGCTGCAAGATGGTGC-ATCCAGGCTCAGAGCTGTCCT----------------------------TTC----------------------AAGATGCCCA-CCGGTGGGCAGACCGAGGGGTCCTTAGGGCCACCACAGTTTGACTTCCTATCTATGCCATGAGCCACGTTCTTATTTACCTGGGCT-TTTAGCATCTGG-ATGGCTTCAGAATCTTTT----AGTCTGTATGTCTCATTGTGTAAAGGTGGTTTTGGGGCCTCTGTGGAAGGTCAGAACCAGAGAC--AGTCTCTCTCCTGACAGGTTTGAG--------------------GGTGGAAGGGTAGAGGTAATATGGGAAGACCCCTGGAGAGTGGGCATCTGGATGAGTCTTTCCAGTTCTCACTGGCATGATTCCTTCAAAGAGGTTTAGGAAGAAGAGTATGTGA----------------GGGG-CCCATCACTGACAATGTGTGTGTCTGCATG---TTTT-----------------------------TTGGTC-CTCTTTGGAGACACTGTTAACAGATCAGAATCCAAAACTGCCCTCTGGGATGCAGGCTGATTAGGTGAGAGAATTCCCTATACTAATCTGAAGAAAGTCT-GGATGGAGAGAGAGTCAAGCAACATGCTTGAGCTTGAAGTTGTTGATGGGCTTCTTCTTTCCTCTTTAATTTTAATGTGaaaattttttttgaagcataacagaaatacaggaaagtatccaaatcccaagtatacagctacatagctttcccctaagtcacctgtgtaacctgcacctaatcctcatgctaaccactatcctggctttcaacaccttaggttagttttgccagtttggggactttatatgaatagaaccatataTTGCTTAAGGACttttttttaatttaattaattgattatttattcatgagagatagagagagagagagagaggcagagacacagacagagggagaagcaggcttcatg i canFam3.chr34 I 124 I 155 a score=247828.000000 s hg38.chr3_KI270781v1_alt 26006 87 + 113034 a-------gttcagtggcttttccaaaatcacatgtgtaactagcatctaatcaagaaattgaactctactagaacaccagaagccccctaatg s panTro4.chr3 13776251 87 - 202329955 a-------gttcagtggcttttccaaaatcacatgtgtaactagcatctaatcaagaaattgaactctactagaacaccagaagccccctaatg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13758443 87 - 202140232 a-------gttcagtggcttttccaaaatcacatgtgtaactagcgtctaatcaagaaatcaaactttactagaacaccagaagccccctaatg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14315766 87 - 123690457 a-------gttcagtggcttttccaaaatcacatgtgtagctagcatctaatcaagagatcgatctttactagaacaccagaagccccctaatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103599732 87 + 192599291 a-------gttcagtggcttttccaaaatcacaagtgtaactggcatctaatcaagaaatcgaactttgctagaacaccagaagccccctaatg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103241076 87 - 192460366 a-------gttcagtggcttttccaaaatcacaagtgtaactggcatctaatcaagaaatcgaactttgctagaacaccagaagccccctaacg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101037556 87 + 187378091 A-------GTTCAGTGGCTTTTCCAAAATCACAAGTGTAACTGGCATCTAATCAAGAAATCGAACTTTGCTAGAACGCCAGAAGCCCCCTAATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4904896 87 + 91754291 a-------gttcagtggcttttccaaaatcacaagtgtaactggcatctaatcaagaaatcgaactttgctagaacaccggaagtcccctaatg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92382955 93 - 98464013 agtgtacggtttggtggcttttccaaaatcacatgtgtacgcggcagctagtcaagaaacagaattttgccggaacaccagaaaccccc-aagg i calJac3.chr15 C 0 C 0 e canFam3.chr34 24764017 155 - 42124431 I a score=323933.000000 s hg38.chr3_KI270781v1_alt 26093 124 + 113034 cttccactcag-----------------------------------tcactcccccaccatgctaaccactcacctgacttctaataccttagcttcctttcaccagttgg-ggactttatag--gaatagaatcatCTGATATTActgaaggacttttaag s panTro4.chr3 13776338 124 - 202329955 cttccactcag-----------------------------------tcactcccccaccatgctaaccactaacctgacttctaataccttagcttcctttcaccagttgg-ggactttatag--gaatagaatcatCTGATATTATTgaaggacttttaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13758530 124 - 202140232 cttccacccag-----------------------------------tcactcccccaccatgctaaccactcacctgacttctaataccttaggttcctttcgccagttgg-ggactttatag--gaatagaataatCTGATATTActgaaggacttttaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14315853 124 - 123690457 cttccacccag-----------------------------------tcactcccacatcatgctaaccactcacctgacttctaataccttaggttcctttcaccagttgg-ggactttatag--gaatagaatcatCTGATATTActgaaggacttttaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103599819 124 + 192599291 ctcccacccag-----------------------------------tctctcccccattatgctaaccactcacctgacttctaataccttaggtttcttctgccagtttg-gaactttatgg--aaatagaatcatCTGATACgactgaaggacttttaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103241163 124 - 192460366 ctcccacccag-----------------------------------tctctctcccattatgctaaccactcacctgacttctaataccttaggtttcttctgccagtttg-gaactttatgg--aaatagaatcatCTGCTACgactgaaggacttttaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101037643 123 + 187378091 CTCCCACCCAG-----------------------------------TCTCTC-CCCATCATGCTAACCACTCACCTGACTTCTAATACCTTAGGTTTCTTTTGCCAGTTTG-GAACTTTATGG--AAATAGAATCATCTGATACGACTGAAGGACTTTTAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4904983 124 + 91754291 ctcccacccag-----------------------------------tctctcccccattatgctaaccactcacctgacttctaataccttcggttccttttgccagtttg-gaactttatag--aaatagaatcatCTGATACgactgaaggacttttaag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92383048 125 - 98464013 ctccctcccag-----------------------------------ccactcccccatcatgttggcccctcacctgacttctaataccttaggtttgtttcacctgtttgaggactttacag--gaagagaatcgtgtgatatTActgaagggcttgtaag i calJac3.chr15 C 0 I 308 s canFam3.chr34 24764172 143 - 42124431 cttcagctcaggtcatgatcatggggtcctggcatagagtcctgcatcgggctccctgcatggagcctgcttctccctctgcctatgactcagcctctctctgtgtgtctc------tcatgaataaataaaatctt----taataaaaaaag--------- i canFam3.chr34 I 155 C 0 a score=2890424.000000 s hg38.chr3_KI270781v1_alt 26217 936 + 113034 aacagaaatattgaatacccaatattgagaactttgctttgggatgat----------atcatcatcctcatacacataataaagcctgctgagcgaacaaatgtcttttgcatgtgtttttgttttgCTTTGTTTTGTTTTGTTTTCCAGATATTAGAGGTGACAATCCGTGGAAAGGAGCCGAGTCTCCCATCTGGGTCAGTGCAGAAA--CGGAGCAAAGGGAGCTTCTGCAGAATGTGTTTGCAAGTAAG-GCACCGCTTGAGCAGATTCAGACACTCCAAGCCAGACGGGAGGggg-----------------------aacattgggcagagcattggacttcc----cctcagaaggtaggacaggggctgagtcaaatt-catataCT------------------TTCCACTAACAATGGAATTATAAACTAGATAAGCACATTTCACTGGAAAAGATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGTCCCTATTTGACATTAACTGGCTGGTTATTCTTGCATGATTTATACCTTCATGAGTCAGATTATGTGATTGAATCAAACGAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAGGGGAGGAGGCTCCAGCCATAGATATCAGAAGAGACCAGAGAAT-AAATAAAACCCCTTCTGGTATGAGATTGCCATTCTACTCTCTATTGTGAAAAGTTGCTACTGGATGCAGAGACGCTTAC-AGGGGGCATCGAGAGGGTTTCCAGAACCAGTCTTGGGCAGCTGACAGGCCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCAATAGCAGCAAAAGCTGAAACCAGAAGGGCACTCAGCTGAGCCTCCCGGGGCAGCAGGGTG-----------GGA---------AGAAGGAGGAC-CCAACTCATCAAGAGGACCCTCCCTTTCAACAGTCATCACAGGT-AGTATAAGGCAGCTCTGGACAGGATTTCACAGTAGAATCACCACAGGAGCTTACA s panTro4.chr3 13776462 936 - 202329955 aacagaaatattgaatacccaatattgagaactttgctttgggatgat----------atcatcatcctcatacacataataaagcctgctgagcaaacaaatgtcttttgcatgtgtttttgttttgctttgttttgttttgttttccagatattagaggtgacaatccgtggaaaggagccgagtctcccatctgggtcagtgcagaaa--cggagcaaagggagcttctgcagaatgtgtttgcaagtaag-gcaccgcttgagcagattcagacactccaagccagacgggaggggg-----------------------aacattgggcagagcattggacttcc----cctcagaaggtaggacaggggctgagtcaactt-catataCT------------------TTCCACTAACAATGGAATTATAAACTAGATAAGCACATTTCACTGGAAAAGATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGTCCCTATTTGACATTAACTGGCTGGTTATTCTTGCATGATTTATACCTTCATGAGTCAGATTATGTGATTGAATCAAACAAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAGGGGAGGAGGCTCCAGCCATAGATATCAGAAGAGACCAGAGAAT-AAATAAAACCCCTTCTGGTAAGAGATTGCCATTCTACTCTCTATTGTGAAAAGTTGCTACTGGATGCAGAGACACTTAC-AGGGGGCATCGAGAGGGTTTCCAGAACCAGTCTTGGGCAGCTGACAGGCCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCAATAGCAGCAAAAGCTGAAACCAGAAGGGCACTCAGCTGAGCCTCCCGGGGCAGCAGGGTG-----------GGA---------AGAAGGAGGAC-CCAACTCATCAAGAGGACCCTCCCTTTCAACAGTCATCACAGGT-AGTATAAGGCAGCTCTGGACAGGATTTCACAGTAGAATCACCACAGGAGCTTACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13758654 934 - 202140232 aacagaaatatcgaatacccaatattgagaattttgctttgggatgat----------atcatcatcctcatacacataataaagcctgctgaacaaacaaatgtcttttgcatgtgtttttgttttgctttgttttgttttgttttccagacattagaggtgacaatccgtggaaaggagccgagtctcccatctgggtcagtgcagaaa--cggagcaaatggagcttctgcagaatgtgtttgcaagtaag-gcaccgcttgagcagattcagacactccaagccagacgggaggggg-----------------------aaccttgggcagagcattggacttcc----cctcagaaggtaggacaggggctgagtcaactt-catataCT------------------TTCCACTAACAACAGAATTATAAACTAGATAAGCACATTTCACTGGAAAAGATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGTCCCTATTTGACACTAACTGACTAGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGATTGACTCAAATGAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAGGGGAGGAGGCTCCAGCCACAGATGCCAGAAGAGACCAGAGAAT-AAATAAAACCTCTTCTGGTAAGAGATTGTCATTCTACTCTCTATTGTGAAAAGTTGCTACTAGATGCGGAGACGCTTAC-AGGGAGCATCGAGAGGGTTTCCAGAACCAGTCTTGGGCAGGTGACAGACCAAATCCTAAAAGAAAAGT--------GAACTCCTTCG--CCTCCAATAACAGCAAAAGCTGAAACCAGAAGGGCACCCAGCTGAGCGCCCCTGGGCGGCGGAGTG-----------GGA---------GGAAGGAGGAC-CCAACTCATCAAGAGGACCCTCCCTTTCAACAGTCACCGCAGGT-AGGAT-AGGCGGTTCTGGACACGTTTGCACAGTAGAATCACCACAGGAGCTTTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14315977 937 - 123690457 aacagaaatatcgaatacccaatattgagaactttgctttgggatgat----------atcatcatcctcatacacataataaagcctgctgagcaaacaaatgtcttttgcatgtgtttttgttttgCTTTGTTTTGTTTTGTTTTCCAGACATTAGAGGTGACAATCTGTGGAAAGGAGCCGAGTCTCCCATCTGGGTCAGTGCAGAAA--CAGAGCAAAGGGAGCTTCTGCAGAATGTGTTTGCAAGTAAG-GCACCGCTTGAGCAGATTCAGACACTCCAAGCCAGACGGGAGGGgg-----------------------aaccttgggcagagcattggacttcc----cctcagaaggtaggacgggggctgagtcaactt-catataCT------------------TTCCACTAACAATGGAATTATAAACTAGATAAGCACATTTCACTGGAAAAGATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGCCCCTATTTGACATTAACTGGCTGGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGATTGAATCAAATGAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAGGGGAGGAGGCTTCTGCCACAGATATCAGAAGAGACCAGAGAAT-AAATAAAACCCCTTCTGGTAAGAGATTGCCATTCTACTCTTTATTGTGAAAAGTTGCTACTAGATGCAGAGGCGCTTACGGGGGGGCATCGAGAGTGTTTCCAGGACCAGTCTTGGGCAGCTGACAGACCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCGGTAGCAGCAAAAGCTGAAACCAGAAGGGCACCCAGCTGAGCCTCCCGGGGCGGCGGGGTG-----------GGG---------GGAAGCAGGAC-CCAACTCATCAAGAGGACCCACCCCTTCAGCAGTCACTGCAGGC-AGTATAAGGCGGTTCTGGACAGGATTGCACAGTAGAGTCACCACAGGAGCTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103599943 939 + 192599291 aacagaaatatcaaatgctcaatattgacaactttgctttgggatgatataataactgatcatcatcctcacacacatagtaaagcctgttgagcaagcaaatgtcttttgcatgtg-------------ttgttttgttttgttttccagacgttagaggtgacaatccgcagaaaggagccaagtgtcccctctgggtcagggcagaaa--ccgagcaaagggagcttctgcagaatgtgtttgcaagtaag-gcaccgcttgagcagattcagacactccaggccagatgggagggga-----------------------aaccttgggcagagcattgaacttcc----cctcagaatgtaggacaggggctgagtcaactc-catgtactttcaaaagatagggtgacttccagtaatatcggaattacaAACTAGATAAGCACATTTCACTGGAAAATATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGTCCCTATTTGACATTAACTGGCTGGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGACTGAATCAAACGAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAAGGGAGGAGGCTCCAGCCAGAGATATCAGAAGAGACCAGAAAATAAAAAAAAATCCCTTCTGGTAAGAGATTTCCATGCTACTCTTTATTCTGAAAAGTTGCTACTAGATGCAGAGGTGC-TAC-AGGGGGCATCGAGAGGGTTTCCAGGACCAGTCCTGGGCAGGTGACAGACCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCAGTAGCAGCAATAGCTGAAATCAGAAGGGCACCCAGCTGAGCCTCCCGGG----------------------------------GGAAGCAGGACGCCAACTTGTCAAGAGGACCCACCCTTTCAACAGTCACGGCAGGTAAGTATAAGGCGGTTCCGGACAAGATTGCCCAGTAGAATCACCACAGGAGATTTCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103241287 939 - 192460366 aacagaaatatcaaatgctcaatattgacaactttgctttgggatgatataataactgatcatcatcctcacacacatagtaaagcctgttgagcaagcaaatgtcttttgcatgtg------------tttgttttgttttgttttccagacgttagaggtgacaatccgcagaaaggagccaagtgtcccctctgggtcagggcagaaa--ccgagcaaagggagcttctgcagaatgtgtttgcaagtaag-gcaccgcttgagcagattcagacactccaggccagatgggagggga-----------------------aaccttgggcagagcattgaacttcc----cctcagaatgtaggacaggggctgagtcaactc-catgtactttcaaaagatagggtgacttccagtaatatcggaattacaAACTAGATAAGCACATTTCACTGGAAAATATACAAAGAACTAGTCATCCCCATG----GACATATGGTCGTCCCTATTTGACATTAACTGGCTGGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGACTGAATCAAACGAAGCATGCGTAAGTCTGGAAAAAGAGAGGAAAGGGAGGAGGCTCCAGCCAGAGATATCAGAAGAGACCAGAAAAT-AAATAAAATCCCTTCTGGTAAGAGATTGCCATGCTACTCTTTATTCTGAAAAGTTGCTACTAGATGCAGAGGTGC-TAC-AGGGGGCATCGAGAGGGTTTCCAGGACCAGTCCTGGGCAGGTGACAGACCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCAGTAGCAGCAATAGCTGAAATCAGAAGGGCACCCAGCTGAGCCTCCCGGG----------------------------------GGAAGCAGGACGCCAACTTGTCAAGAGGACCCACCCTTTCAACAGTCACCGCAGGTAAGTATAAGGCGGTTCCGGACAAGATTGCCCAGTAGAATCACCACAGGAGATTTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101037766 939 + 187378091 AACAGAAATATCAAATACCCAATATTGACAACTTTGCTTTGGGATGATATAATAACTGATCATCATCCTCACACACATAGTAAAGCCTGTTGAGCAAGCAAATGTCttttgcatgtg------------tttgttttgttttgttttccagacgTTAGAGGTGACAATCCACAGAAAGGAGCCAAGTGTCCCCTCTGGGTCAGGGCAGAAA--CCGAGCAAAGGGAGCTTCTGCAGAATGTGTTTGCAAGTAAG-GCACCGCTTGAGCAGATTCAGACACTCCAAGCCAGATGGGAGGGGA-----------------------AATCTTGGGCAGAGCATTGAACTTCC----CCTCAGAATGTAGGACAGGGGCTGAGTCAACTC-CATGTACTTTCAAAAGATAGGGTGACTTCCAGTAATATCGGAATTACAAACTAGATAAGCACATTTCactggaaaatatacaaataactagTCATCCCCATG----GACATATGATCATCCCTATTTGACATTAACTGGCTGGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGACTGAATCAAACGAAGCATGCGTAAGTctggaaaaagagaggaaagggaggaggcTCCAGCCAGAGATATCAGAAGagaccagaaaat-aaataaaatcccttCTGGTAAGAGATTGCCATGCTACTCTTTATTCTGAAAAGTTGCTACTAGATGCAGAGGTGC-TAC-AGGGGGCATCGAGAGGGTTTCCAGGACCAGCCCTGGGCAGGTGACAGaccaaaacttaaaagaaaagt--------gAACTCCTTTG-CCCTCCAGTAGCAGCAATAGCTGAAATCAGAAGGGCACCCAGCTGAGCCTCCCGGG----------------------------------GGAAGCAGGACGCCAACTTGTCAAGAGGACCCACCCTTTCAACAGTCACCGCAGGTAAGTATAAGGCGGTTCCGGACAAGACTGCCCAGTAGAATCACCACAGGAGATTTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4905107 959 + 91754291 aacagaaatatcaaatacccaatattgacaactttgctttgggatgatataataactgatcatcatcctcacacacatagtaaagcctgttgagcaagcaaatatcttttgcatgtg------------tttgttttgTTTTGTTTTCCAGATGTTAGAGGTGACAATCCGCAGAAAGGAGCCGATTCTCCCCTCTGGGTCAGTGCAGAAA--CCAAGCAAAGGGAGCTTCTACAGAATGTGTTTGTAAGTAAG-GCACCGCTTGAGCAGATTCAGACACTCCAAGCCAGATGGGAGGGga-----------------------agccttgggcagagcattggacttcc----cctcagactgtaggacaggggctgagtcaactc-catatactttcaaaagatagggtgacttccagtaatatcggaattacaAACTAGATAAGCACATTTCACTGGAAAACATACAAAGAACTAGTCATCCCCATG----GACATATGGTCATTCCTATTTGACATTAACTGGCTGGTTATTCCTGCATGATTTATACCTGCATGAGTCAGATTATGTGATTGAATCAAACGAAGCATGCGTAAGTCTGGAAAA--AGAGGAAAGGGAGGAGGCTCCAGCCACAGATATCAGAAGAGACCAGAGAAT-AAATAAAATCCCTTCTGGTAAGAGATTGCCATGCTACTCTATATTCTGAAAAGTTGCTACTAGACGCAGAGGTGC-TAC-AGGGGGCATCGATAGGGTTTCCAGGACCACTCCTGGGCAGGTAACAGACCAAATCTTAAAAGAAAAGT--------GAACTCCTTTG-CCCTCCAGTAGCAGCAATAGCTGAAATCAGAAAGGCACCCAGCTGAGCCTCCCgggggggggggggg-----------gggggggggggCGGAAGCAGGACGCCAGCTTGTCAAGAGGACCCACCCTTTCAACAGTCACTGCAGGT-AGTATAAGGCGGTTCCAGGCAAGATTGCCCAGTAGAATCACCACAGGAGATTTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92383481 934 - 98464013 aacagaaataccgaatacccaatattgagagctttgctgtgagacggtatagtaaccaatcatcatcctcacactcacaagaaagtctgctgagcaaacaaacaccctttgcgtgtg---------------tttttttCTTATTTTCCAGACATTCGAGGTGGCGATCCGT-GAAAAGAGTCAAGTCTCCCCTCTGGGTTAGAGTCTCCCCTCTGGACAAAGGGAGCTTCTGCAGAATGCGTTTGCAAGTGAG-GCGCCACTTGAGCAGATTCAGACACTCCAAGCCAGATGGGAGGGga-----------------------aaccgtgggcacagcattgggcttcc----cctcagaatgtaggacaggggctgagtcaactt-catagacttccaaaagatggggtgactttcactaacgtcggaattacaAACGACATGAGCCCATTTCAGTAGAGAAGATACAAAG-ACTAGTCATCCCCATGGACAGACATATGGTCGTCCCTATTTGGCATTAGCTGGCTGGCTATTCCTGTCTGATTTATACCTGCATGAGTCAGATTACGGGGTTGAATCAAATGAAGCATGCATTAGTCTGGAAAAAGAGAGGAAGGGGAGAAGGCTGCCGCCACACACATCAGAAGAAACCAGAGAAT-GAAT-AAACCTCTTCTGGTA--GAATTCCCATTCTGCATTCTATTCTGAAAAGCTGCTACTAGATGCAGAGGTGC-TAC-AGGGAGCATCAGGATGGTTCCCAGGACCAGTCCTGGGCAGGTGACAGACCAAATCTTAAAAG-AAAGT--------GAACTCCTTTG-TCCCCCAGTAGCAGCAAAAGCTGAAACCAGAAGGGCACCCAGCTGAGCCTCCCGG-----------------------------------GAGAGCAGAGTTCCAACTTACCCAGAGGACCCAACCTTTCAACAGCCACCACAGCT-CATATAGGGTGGTTCCGGATGGGATTGCACAGTAGAATCTCCGTGGGAAATTTCA i calJac3.chr15 I 308 I 452 s canFam3.chr34 24764315 954 - 42124431 aacaaaaatatttaatactcaacatcaagagttttactttgggatgatgtaatatctaatcatcatcctcacatatataataaagcctgctgtgcacgtaaatgccttttgtaaacatt----------tctgttttgttttgttttccaaatggtagaggtaggaatcaatgaaaaagggctgagtctcccttctgggtcagtg-agaaa--cagagcaaagagtgatgctgcag-atgtgcctgcaggtgtgaacacagccagtgcagaat-gcactctcagagttagagaggagcaaagccccagccctggaaagttcaagaattttagacagagcattggacttcccacaccccagagtatgggacagggctcaagtaaattcatatgtatt-tcaaaagacagagtagcttctgctaatatttgggttacaAAGTAGATAAG--CATTTCCCTAGAGAATACACGAAGAACTCCAGATCCCCATG----GACTTATGGTCATCCCTATTTGATGTGAACTGG-TGGTTATTCCTGTGTGACATATACCTGCACAAGTTGGATGACAGGGCTGAGTCAAACGTAGCATGCCTAAGTCCGAAAGACGGGA------GAGGAAGGCTCCAGCCACAGATACCAGAAGGGACCAGAGAAT-A----AAACCCCTGCTGATA-GAGGTTGCCATTCAGCCACCTACACAGAAATGTTGCTACTAAG------------TAC-AGAAGGCACTGGGAGGGTTTCCAGGACCAGCGCTGGGCAGG----AGACTAAATCTCAAAGGAAAAGTAAAAAGTGAAACTTCTTTGCCCCTATAGTAGCCCCAACAGTTGAACCACAAACAGCGTCCAGCTGAGCCTCCCAGAGAGGCAGGGAGCCCACACAGGTGGG---------AGGAAGAGGGC--------------AGGACCCACCC-GCCAACAGTGACCCCAGAT-ACCAG-AGgtggttctcaacctgactgcaagttccaatcaccagaaaccagttgg i canFam3.chr34 C 0 C 0 a score=4692416.000000 s hg38.chr3_KI270781v1_alt 27153 1400 + 113034 TACTTCACtttgtttagtgtggtgaaatatatgtgacataaaactgaccacttttaccactattaggtatacagttcattggcattaaatacatcaccattgctgtgcaatcatcatcatcgtccgtcttcagaactcttccatcttcccagactgaaactctgta--c--attaggccacaatt----cactcccttct--actcagccccctggcaaccaccaatctattttcttcctctatgaatttgactactctgggtaccctatataaatggaa-----tcatacagtatttttcctttagtgtctgcaggggaagttttaaaagcatgaatgcccaagcccaaccccaagctaattaaatcagaatttct-gggggg-aaa-----------------------------------------------------------------gcccaagtaat---------------------------------------------------------------------tgctgttattttt----------------------------------------aaaagctcaccggtgattctaatgggc----------acccatgggtcagaaGATCTAAATCAGATTTGCACTCAAGAACCCCTCCCCCATGACAAACACACCTCAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGATGAGAGGCTTAAAATGACGTATT----CGGGTATCACAGCGACTGAAACTCATGTGCTAAAGATTAATCTACCAGTCAAGAGGGGTAAGTGATTATTATGAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAGTAGCAGATGGTAAGTGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCATGGCCGCTTT---------TTAGG--GAGCAGTGATAAAGGTTAGTCCTATTTACCTTTAGTTACCTTGTGGACACAATAGGATTTGGGAGGAATTTACGACCAGCACATCTGTGGATTTGCCTTGTTCATTGGAATGCGGCCACTCGGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGAATTT-CGCCCC------CCCCCCAACTTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGAGCTCCTTCTGTTCCTTCTTTCTGCAGAATtagaaatatacagagaatgatcagatagatagatgataggcagat------------agataggtaggtagataaacagataAAgagacaggcaaatgtatacaaagtgacaaaatgataagaaagatccacacc-aaatcatgat-attggttctccca--gtggaggaagggaggtatgggaatgggatcagaagaatttgaatgttttatttacttagttttttaaaaccctggaaacaagcaggacaaaatgttaacacttgttctctctgagttggcatttgttgtgttatattcactctttttactcgtctttgtgcttTTTGGTATCTTT s panTro4.chr3 13777398 1396 - 202329955 TACTTCACtttgtttagtgtggtgaaatatacgtgacataaaattgaccacttttaccactattaggtatacagttcattggcattaaatacatcaccattgctgtgcaatcatcatcatcatccgtcttcagaactcttccatcttcccagactgaaactctgta--c--attaggccacaatt----cactcccttct--actcagccccctggcaaccaccattctgttttcttcctctatgaatttgactactctgggtaccctatataaatggaa-----tcatacagtatttttcctttagtgtctgcaggggaagttttaaaagcatgaatgcccaagctcaaccccaagctaattaaatcagaatttct-ggggggaaaa-----------------------------------------------------------------gcccaagtaat---------------------------------------------------------------------tgttgttattttt----------------------------------------aaaagctcaccggtgattctaatgggc----------acccatgggtcagaaGATCTAAATCAGATTTGCACTCAAGAACCCCTCCCCCATGACAAACACACCTCAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGATGAGAGGCTTAAAATGACGTATT----CGGGTATCACAGCGACTGAAACTCATGTGCTAAAGATTAACCTACCAGTCAACAGGGTTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAGTAGCAGATGGTAAGTGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCATGGCCGCTTT---------TTAGG--GAGTGGTGATAAAGGTTAGTCCTATTTACCTTTAGTTACCTTGTGGACAAAATAGGATTTGGGAGGAATTTACGACCAGCACATCTGTGGATTTGCCTTGTTCATTGGAATGCGGCCACTCAGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGAATT------CC------CCCCCCAAGTTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAACTGAGGCATGACCAGTGCCTTACTCAAGCAAGAGCTCCTTCTGTTCCTTCTTTCTGCAGAATTAGAAATATACAGAGAATGATCagatagatagatgataggtagat------------agataggtaggtagataaacagataAAgagacacgcaaatgtatacaaagtgacaaaatgataagaaagatccacacc-aaatcatgat-attggttctccca--atggaggaagggaggtatgggaatgggatcagaataatttgaatgttttatttacttagttttttaaaaccctggaaacaagcaggacaaaatgttaacacttgttctctctgagttggcatttgttgtgttatattcactctttttactcgtctttgtgcttTTTGGTATCTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13759588 1395 - 202140232 TAGTTCACtttgtttagtgtggtgaaatatatgtgacataaaattgaccgcttttaccactattaggtatacagttcattggcattaaatacagcaccattgctgtgcaatcatcaccaccgtccgtcttcagaactcttccatcttcccagactgaaactctgta--c--attaggccacaatt----cattccctttt--actcagccccctggcaaccaccattctatttccttcctctatgaatttgactactctgggtaccctatataaaaggaa-----tcatacagtatttgtcctttagtgtctTCAggggaagttttaaaagcatgaatgcccaagcccaaccccaagctaattaaatcagaatttct-ggggga-aaa-----------------------------------------------------------------gcccaaatcat---------------------------------------------------------------------tattgttattttt----------------------------------------aaaagctccccggtgattctaataagc----------acccgtgggtcagaaGATCTAAATCAGATTTGCATTCAAGAACCCCTCCCCCATGACAAACACACCTCAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGATGAGAGGCTTAAAATGACGTATT----CGGGTATCACAGCGACTGAAACTCATCTGCTAAAGATTAATCTACCAGTCAACAAGGGTAAGTGATTATTATTAGACACTGTCTTCTTCTGGAAACTGGGAGGGCTC--AGAGTAGCAGATGGTAAGTGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GAGACCCGTGGCCACTTT---------TTTGG--GAGTGGTGATAAAGGTTAGTCCAATTTACCTTTAGTTACCTTGTGGACAAAATAGGATTTGGGAGGAATTTACGACCAGCACATCTGTGGATTTGCCTTGTTCATTGGAATGTGGCCACTCAGACATATGGTTCTCATCAACTGTATTTTTGCATGATTCTTGAATT-----CCC------CCCCCCAAATTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAAC-TCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGAACTCCTTCTGTTCCTTGTTTCTGCAGAATTAGAAATATACAGAGAATGATCagatagatagatgataggtagac------------agataggtaggtagataaacagataaagagacagGCAAATGTATACAAAATGACAAAATGATAAGAAAGATCCACACC-AAATCATGAT-ATTAGTTCTCCCA--GTGGAGGAAGGGAGGTATGGGAATGGGATCAGAAGAATTTGAATGTTTTATTTACTTAGTTTTTTaaaaccctggaaacaagcaggacaaaatgttaacacttgttctctctgagttggcatttgttgtgttatattcactctttttactcgtctttgtgctttttggtatcttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14316914 1400 - 123690457 TATTTCACtttgtttagtgtggtgaaatatatgtgacataaaattgaccacttttaccgctgttaggtatacagttcattggtattaaatacagcaccattgctgtgcaatcatcaccactgtctgtcttcagaactctt-catcttcccagactgaaactctgta--c--cttaggccacaatt----cattcccttct--actcagccccctggcaaccaccattctattttcttcctctatgaatttgactactctgggtaccctatataaatggaa-----tcatacagtatttgtcctttagtgtctgcaggggaagttttaaaagcatgaatacccaagcccaaccccaagctaattaaatcagaatttct-ggggga-aaa-----------------------------------------------------------------gcccaaatcat---------------------------------------------------------------------tattgttattttt----------------------------------------aaaagctccccggtgattctaataagc----------acccgtgggtcagaaGATCTAAATCAGATTTGCATTCAAGAACTCCTCCCCCATGTCAAACACACCTCAGCACCTGCTGGCTGACTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCTTTCTTCAGCTGGAGATGAGACGCTTAAAATGATGTATT----CGGGTATCACAGCGACTGAAACTCATCTGCTAAAGATTAATCTACCAGTCAGCAAGGGTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAGTAGCAGATGGTAAGTGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCATGGCCGCTTT---------TTTGG--GAATGATGATAAAGGTTAGTCCTATTTACCTTTAGTTACCTTGTGGACAAAACAGGAGTTGGGAGGAATTTACGATCAGCACATCTGTGGATTTGCCTTGTTCACTGGAATGTGGCCACTCAGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGAATTTCCCCCCC------ACCCCCACTTTTTTTTCATTTAACCGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAACTGAGGCATGACCAGTGCCTTACTCAAGCAAGAGCTCCTTCTGTTCCTTGTTTCTGCAGAATtagaaatatacagagaatgatcagatagacagatgataggtagat------------agataggtaggtaggtaaacagataAAgagacaggcaaatgtatgcaaaatgacaaaatgataagaaagatccacacc-aaatcatgat-attggttctccca--atggaggaagggagatatgggaatgggatcagaagaatttgaatgttttatttacttagttttttaaaaccctggaaacaagcaggacaaaatgttaacacttgttctctctgagttggcatttgttgtgttatattcactctttttacttgtctttgtgctttttggtatcttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103600882 1414 + 192599291 TATTTCACtttgtttagtgtggtgaaatatacatgacataaaattgaccacttttaccactgttaggtatacagttcattggcattaaatacatcgccattgctgtgcaatcatcaccactgtccgtctttggagctcttccatcttcccagactgaaactctgta--c--attaggccacagtt----cattcccttct--actcagccccctggcaaccaccattctgttttatttctctatgaatttgactactctgggtaccctatataaatggga-----taatacagtatttgtcctttagtgtctgcaggggaagttttaaaagcatgaatgcccaagcccaaccccaagctaattaaatcagaatttctgggggga-gga-----------------------------------------------------------------gcccaaataat---------------------------------------------------------------------tgttgttattttt----------------------------------------aaaagctccttggtgattctaatgggc----------acccgtgggttgGAAGATCTAAATCAGATTTGCATTCAAGAACCCCTCCCCTATGACAAACACACCTAAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGACGAGAGGCTTAAAATGACTTATT----CGGGTATCACAGCGACTGAAACTCATCTGCTAAAGATTAATCTACCAGTCAACAAGGGTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAATAGCAGATGGTAAATGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCATGGCCGCTTT---------TTTGG--GAGTGGTGATAAAGGTTAGTCCTGTTTACCTTTAGTAACCTTGTGGACAAAATAGGAGTTGGGAGGAATTTACGACCAAGACATCTGTGGATTTGCCTTGTTCATTGGAATGTGGCCACTCAGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGAATT-CCGCCCA------CCCCCCCCACTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGAGCTCCTTCTGTTCCTTGTTTCTGCAGAATTAGAAATATATAGAGAATGATCagatagatagatgataggtagatagataggtaggtagataggtaggtagataaacagataAAgagacagacaaatgtatacaaaatgacaaaatgataagaaagatctacacc-aaatcaggataattggttctccca--gtggaggaagggaggtatgggaatgggatcagaagaatttgaatgttttatttatttagttttttaaaaccctggaaacaagcaggacaaaatattaacacttgttcactctgagttggcatttgttttgttatatttactctttttacttgtctttgtgctttttggtatattt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103242226 1412 - 192460366 TATTTCACtttgtttagtgtggtgaaatatacatgacataaaattgaccacttttaccactgttaggtatacagttcattggcattaaatacatcgccattgctgtgcaatcatcaccactgtccgtctttggagctcttccatcttcccagactgaaactctgta--c--attaggccacaatt----cattcccttct--actcagccccctggcaaccaccattctgttttatttctctatgaatttgactactctgggtaccctatataaatggga-----taatacagtatttgtcctttagtgtctgcaggggaagttttaaaagcatgaatgcccaagcccaaccccaagctaattaaatcagaatttct-ggggga-gga-----------------------------------------------------------------gcccaaataat---------------------------------------------------------------------tgttgttattttt----------------------------------------aaaagctcctcggtgattctaatgggc----------acccgtgggttgGAAGATCTAAATCAGATTTGCATTCAAGAACCCCTCCCCTATGACAAACACACCTAAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGACGAGAGGCTTAAAATGACTTATT----CGGGTATCACAGCGACTGAAACTCATCTGCTAAAGATTAATCTACCAGTCAACAAGGGTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAATAGCAGATGGTAAATGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCATGGCCGCTTT---------TTTGG--GAGTGGTGATAAAGGTTAGTCCTGTTTACCTTTAGTAACCTTGTGGACAAAATAGGAGTTGGGAGGAATTTACGACCAAGACATCTGTGGATTTGCCTTGTTCATTGGAATGTGGCCACTCAGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGAATT-CCGCCCA-------CCCCCCCACTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGAGCTCCTTCTGTTCCTTGTTTCTGCAGAATTAGAAATATATAGAGAATGATCagatagatagatgataggtagatagataggtaggtagataggtaggtagataAACAGATAAAgagacagacaaatgtatacaaaatgacaaaatgataagaaagatctacacc-aaatcaggataattggttctccca--gtggaggaagggaggtatgggaatgggatcagaagaatttgaatgttttatttacttagttttttaaaaccctggaaacaagcaggacaaaatattaacacttgttcactctgagttggcatttgttttgttatatttactctttttacttgtctttgtgctttttggtatattt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101038705 1413 + 187378091 TATTTCACTTTGTTTAGTGTGGTGAAatatacatgacataaaattGACCACTTTTACCACTGTTAGGTATACAGTTCATTGGCATTAAATACATCGCCATTgctgtgcaatcatcaccactgtCCGTCTTCGGAGCTCTTCCATCTtcccagactgaaactctgta--c--aTTAGGCTACAATT----CATTCCCTTCT--ACTCAgccccctggcaaccaccattctgttttattcctctatgaatttgactactctgggtACCCTATATAAATGGga-----taatacagtatttgtcctttagtGTCTGCAGGGGAAGTTTTAAAAGCATGAATGCCCAAGCCCAACCCCAAgctaattaaatcagaatttct-gggggA-GGA-----------------------------------------------------------------GCCCAAataat---------------------------------------------------------------------tgttgttattttt----------------------------------------aaaagctccccggTGATTCTAATGGGC----------ACCCGTGGGTTGGAAGATCTAAATCAGATTTGCATTCAAGAACCCCTCCCTTATGACAAACACACCTAAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAACTGGAGACGAGAGGCTTAAAATGACTTATT----CGGGTATCACAGCGACTGAAACTCATCTGCTAAAGATTAATCTACCAGTCAACAAGGGTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAATAGCAGATGGTAAATGACTGCTGATttgggagatggggagagacaggaaCACT------GGGACCCATGGCCGCTTT---------TTTGG--GAGTGGTGATAAAGGTTAGTCCTGTTTACCTTTAGTAACCTTGTGGACAAAATAGGAGTTGGGAGGAATTTACGACCAAGACATCTGTGGATTTTCCTTGTTCATTGGAATGTGGCCACTCAGACATATGGTTCCCATCAACTGTATTTTTGCATGATTCTTGaatc-ccacccc------ccacccccacttttttcatttaactgcACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGATCTCCTTCTGTTCCTTGTTTCTGCAGAATtagaaatatacagagaatgatcagatagatagatgataggtagatagacaggtaggtagataggtaggtagataaacagataaaaagacagacaaatgtatacaaaatgacaaaatgataAGAAAGATCTACACC-AAATCAGGATAATTGGTTCTCCCA--GTGGAGGAAGGGAGGTATGGGAATGGGATCAGAagaatttgaatgttttatttacttagttttttaaaacCCTGGAAACAAGCAGGACAAAATATTAACACTTGTTCACTCTGAGTTGGCATTTGTTGTGTTATATTTACTCTTTTTACTTGTCTTTGTGCTTTTTGGTATCTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4906066 1409 + 91754291 TATTTCACTTCATTTAGtgtggtgaaatatacataacataaaattgaccacttttaccactgttaggtatacggttcgttggcattaaatacatcgccattgctgtgcaatcatcaccactgtccgtcttcagagctcttccatcttcccagactgaaactctgta--c--gttaggccacaatt----cattcccttct--actcagccccctggcgaccaccattctattttcttcctctatgaatttgactactctgggtaccctgtataaatggga-----taatacagtatttgtcctttagtgtctgCAggggaagttttaaaa-catgaatgcccaagcccaaccccaagctaattaaatcagaatttct-ggggga-gga-----------------------------------------------------------------gcccaaataat---------------------------------------------------------------------tgttgttattttt----------------------------------------aaaagctccccggtgattctaatgggc----------aCCTGTGGGTCGGAAGATCTAAATCAGATTTGCATTTAAGAACCCCTCCCCC-TGACAAACACACCTAAGCACCTGCTGGCTGATTCCCCAGATTCCTTTAGCTGTGGGTAAAGCTAAGGGTTCTCCGTCTTCAACTGGAGATGAGAGGCTTAAAATGACTTATT----CGGGTATCACAGCCACTGAAACTCATCTGCTAAAGATTAATCTACTAGTCAACAAGGGTAAGTGATTATTATCAGACACTGTCTCCTTCTGGAAACTGGGAGGGCTC--AGAATAGCAGATGGTAAATGACTGCTGATTTGGGAGATGGGGAGAGACAGACACACT------GGGACCCGTGGCTGCTTT---------TTTGG--GAGTGGAGATAAAGGTTAGTCCTG-TTACCTTTAGTTACTTTGTGGACAAAATAGGAGTTGGGAGGAATTTACGACCAGCACATCTGTGGATTTGCCTTGTTCATTGGAATGTGGCCACTCAGACATATGGTTCCCATCAACAGTATTTTTGCATGATTCTTGAATC-CCGCCCACC---GCCCCCCCCACTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACATGGGTTCTAATTGAGGCATGACCAGTGCCTTACTCAAGCAAGATCTCCTTCTGTTCCTTGTTTCTGCAGAATtagaaatatacagagaatgatcagataaatagatgataggtagat----aggtaggtagataggtagatagataaacagataAAgagacagacaaatgtatacaaaatgacaaaatgataagaaagatctacacc-aaatcatgataattggttctccca--gtggaggaagggaggtatgggaatgggatcagaagaatttgaatgttttatttacttagttttttaaaaccctggaaacaagcaggacaaaatattaacacttgttcactctgagttggcatttgttgtgttatatttactctttttacttgtctttgtgcttTTTGGTATCTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92384867 1356 - 98464013 TATTTCACCttgtttaatgtggtaaaatatacatgacataaaatttagcatttttaccacttttaggtaaacagttcattggcattaaataca---------ctgtgcaatcaccaccaccatccatcttcagagctcttccatcttcccaaacggaaactctgtatcc--actagagcgcaatc----cattcccctcc--actcag-cccctggcaaccaccattctattttctttctctct-------actattgtgggtaccctatataagtggaa-----tcatagagtatttgtcctttagtgtctgCACgggaagttttaaaagtatgaatccccaagcccaaccccaagctaattaaaatagaatttct-agggga-gga-----------------------------------------------------------------gcccaaatcat---------------------------------------------------------------------tggtgttattttt----------------------------------------aaaagctccctggtgattcaaataggc----------CCCCTTGAGTCAGAAGATCTAAATCAGGTTTGCATTCAAGAGCCCCTCCCCCATGACAATCACACCTCAGCACCTGCTGGCTGA-TCCCCAAATTCCTTCAGCTGTGGGTAAAGCTAAGGGTTCTCCTTCTTCAGCTGGAGATGAGAGGCTTAAAATGACTGATTCAGGCAGGTATCACAGAGACTGAAACTCATCTGCTAAATATTAATCTACCAGTCAACAAGGATAAGTGATTATTATCAGCCA---------TCT-------------GCTC--AGAGTAGCAGATGATAAGTGA-TGCTGATTTGGGAGATGGGGAGAGGCAGACACACT------GGAACCCATGGCCACTTT---------TTTGG--GAGTGGTGATAAAGGTTAGTCCTGTTTACCTTCAGGTACCTTATGGACAAAATAGGAGTTGGGAGGAATTTACGAGCAGCACATCTGTGCATTCGCCTTGTTCACTGGAATGTGGCCACTCAAACATGTGGTTCCCATCAACTGTATTTTTGCATGACTCTTGAATT--CCCCCC------CACCATCACTTTTTTTCATTTAACTGCACTGACTTCATTACAAAGGAACTTCACTTACACAGGTTCTAACTGAGGCATGACCAGTGCCTTACTCAAGCGAGAGCTCCTTCTGTTCCTTGTTTCTGCAGAATTAGAAATATATAGAGAATGATCagatagatagatgacaggtagat------------aaataggtaggtagatagacagataaacagacagGCAAATGTAT--------ACAGAATAATAGGGAAGATCCACACC-AAATCATGAC-ATTGGTTCTCCCA--ATGGAGGAAGGGAGGTATAGGAATGGGATTAGAAGAATTTGAATGTTTTATTTACATAGTTTTTTAAAACCCTGGAAACAAGCAGGACAAAACGCTAACACTTGTTCACTCTGGGTTGGCATTTGTTGTGTTATATTTACTCTTTTTACTTGTCTTTGTGCTTTTTGGTATCTTT i calJac3.chr15 I 452 I 164 s canFam3.chr34 24765269 1516 - 42124431 tttttcaccttttttattgtag----------ataacataaaatttatcatcttaaccatttctagatgtacaactcagtgacgttaagtacactcacactgttgtgcggccatcaccaccatccctctccagaactctt-catcttccccaacagaggctctgta--ccagttaaacagaaactcccccagtcccctctccccccaaactcctggcaaccacctttctattctgtg--tctgtgaattcaatcactctagatatcccatataagtgctatctattcatacactatttgtccttttgtgcctgcaggggagattttaaaaacctaaat-------------cccagaccaattaaaccagaacttcc-agggga-ggatctaaacatttaaacatctccctgatgggcacctgggtggctcagtgattgagtgtctgcgtttggctcaggtcatgatcccggggtcctggggtcaagtcctgcatcgggctccccgcagggagcctgcttctccctctgcctgtgtctctgcctctctctgtgtgtctctcatgaatacataaatctcaaaaaaaaaaaatttccctgatgattctaatgagcagccttggaaacccctgGGTTAGAAGGTCTGAATCAAATTTACTTTCAGGAACCCCTTCAA-ATAGCAGACACATCTCAACACCTGCTGTCTGATGCCTCAAATTCCTTTAGTCATGGGCAAAGCTAAAGATTTTCCTCCTTCCACTGGAGATGAGGGGTTTACAATG-------------------------ACTAAAACACATCTGCTAAAGATTAATC----AGTCAACAAGTGTGAGTGAGTATTATCAGACACCGTCTCCCTTTGAAAGCCAGAAAGACTCAGAGAGTAGCAGATGGTAAGTAACTGTCCAGTTGGGAGATGGGGAGAGACAGGCACACCCCGCCAGGGACTCTTGGTCACTTTGTGTGTGTGTTGGGCAGGGGGGTGATAAAAGCTAGCCTTGTTCACCTGTAATTGCC----------------------------CTTAGGACCAACACATCTGTTTACTTGCCCAGTTTACTGGAATAGGGCCACTATGACATATGGTTCCGATTGACTGTATTTTTGCATGATTCTTGAGTC-CTCCCCCCTCTGCCCCCTGCTACCCTTTTAATTTAACCACACTGATTTCATTACAAAGGAACTTCACTTACATGGGTTCTCATTGAGGCATGACCAGTGCCTTGTTCCTGGAAGACCTCTTTCTGTTGCTTGTTTCTTCAGAACTAGAAATACATAGAAAATGATAAGGTAGATTAAAGAGATGGAGAG------------AGACA-----------AGACTAAAGGAGAGAgatgcaaacatatataagatgacagaatgacagggaagatccacaccaaaatcgtgat-gttggtt-tcccatcatgaagggagggagggatgggaatgagactggaaagatctgaaggtt---------tagttttct-aaaccctggaagcaaacatgacaaaaagttaacactttttcattcagcattggcatttgttatatt------actttttgaacctatctttgtgcttTTCAGTCCTTA- i canFam3.chr34 C 0 C 0 a score=201570.000000 s hg38.chr3_KI270781v1_alt 28553 62 + 113034 AACAGTTGTCAGtattatatatataggtatataaataatcatacacataaagacacatgtat s panTro4.chr3 13778794 62 - 202329955 AACAGTTGTCAGTATTATATATATAGGTCTATAAATAATCGTACACATAAAGACACATGTAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13760983 62 - 202140232 aagagttgtcagtattacatatataggcatataaataaTCATACACATAAAGACACATGTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318314 62 - 123690457 aaaaGTTGTCAGTATTACATATATAGGTATATAAATAATCATACACATAAAGACACATATAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602296 62 + 192599291 AAAAGTTGTCAGTATtatatatataggtatataaataattatacacacaaatatacatgtat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103243638 62 - 192460366 AAAAGTTGTCAGtattatatatataggtatataaataattatacacacaaatatacatgtat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101040118 62 + 187378091 AAAAGTTGTCAGtattatatatataggtatataaataattatacacacaaatatacatgtat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4907475 62 + 91754291 AAAAGTTGTCAGtattatatatataggtgtataaataattatacacacaaatatacatgtat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92386387 62 - 98464013 aaaaGTTGTCAGTATTACCTATATATGTAAATAAATAATCACACACATAAATATACATGTAT i calJac3.chr15 I 164 C 0 s canFam3.chr34 24766785 61 - 42124431 AAAAAATGTCCATA-TGCATATATTTCTATATAAATAATTGTATGCATAAATATATGTGTAT i canFam3.chr34 C 0 C 0 a score=947792.000000 s hg38.chr3_KI270781v1_alt 28615 324 + 113034 aaagaaataCTTTggccaggcactgtggctcatgcctgtaatctcagcactttggaaggctgaggcagacagattgttttagcccaggagtttgagaccagcctgagcaacatggtgaagccccatctgtacaaaatacacaaaaatttgtaaggtgtgatggcacacgcctgtggtcccagctactccagacgctgaggtgggaggatcgcttgagtgcaggaggtcgaggctgcagtaagccatgattgggccactgcattccagcctgggtgacaaagtaagatcctgtct------caaaaaaaaaaaaaaaaaaaagtaaaaaga s panTro4.chr3 13778856 323 - 202329955 AAAGAAATACTTTggccaggcactgtggctcatgcctgtaatctcagcactttggaaggctgaggcagacagattgttttagcccaggagtttgagaccagcctgagcaacatggtgaagccccatctgtacaaaatatacaaaaatgtgtaaggtgtgatggcacacgcctgtggtcccagctactccagaggctgaggtgggaggatctcttgagtgcaggaggtcgaggctgcagtaagccatgattgggccactgcatttcagcctgggtgacaaagtaagatcctgtct------c-aaaaaaaaaaaaaaaaaaagtaaaaaga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761045 315 - 202140232 AAAGAAATACTTTggccaggcactgtggctcatgcctgtaatctcagcactttggaaggctgaggcaggcagattgttttagcccaggagtttgagaccagcctgagcaacatggtgaagccccatctatacaaaatacacaaaaatttgtagggtgtgatggcacatgcctgtggtcccagctactccagaggctaaggtgggaggatcgcttgagcgcaggaggtcgaggctgcagtaagccatgattgggccactgcattccagcctgggtgacaaagtaagatcctgtct------c-aaaaaaaaaaaaa--------gaaaaga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318376 323 - 123690457 AAAGAAATACTTTggccaggcactgtggctcatgcctgtaatctcagcactttggaaggctgaggcaggcagattgttttagcctaggagtttgagaccagcctgagcaacatggtgaaggctcatctctacaaaatgtacaaaaatttgtagggtgtgatggcacacgcctgtggtcccagctactccagaggctgaggtgggaggatcgcttgagcgcaggaggtcgaggctgcagtaagccgtgattgggccactgcattccagcctgggtgacaaagtaagatactgtct------c-aaaaaaaaaaaaaaagtaaaagaaaaga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602358 325 + 192599291 aaataaataCTTTggccaggtactgtggctcatgcctgtaatctcagcactttggaaggctgaggcagggagattgttttagcccaggagtttgagaccagcttgagcaacatggtaaagccccatctctacaaaatatacaaaagtctgtagtgtgtgatggcacatgcctgtggtcccagctactccagaggctgaagtgggaggatcgcttgagcccaggaggtcgaggttgcagtgagccatgattgggccactgcattccagcctgggtgacaaagtaagatcctgtctaaaaaaa-aaaaaaaaaaaaaaaag----caaaaGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103243700 319 - 192460366 aaataaataCTTTggccaggtactgtggctcatgcctgtaatctcagcactttggaaggctgaggcaggcagattgttttagcccaggagtttgagaccagcttgagcaacatggtaaagccccatctctacaaaatatacaaaagtctgtagtgtgtgatggcacatgcctgtggtcccagctactccagaggctgaagtgggaggatcgcttgagcccaggaggtcgaggctgcagtgagccatgattgggccactgcattccagcctgggtgacaaagtaagatcctgtct------c-aaaaaaaaaaaaaaaag----caaaagt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101040180 320 + 187378091 aaataaatactttggccaggtactgtggctcatgcctgtaatctcagcactttggaaggctgaggcaggcagattgttttagcccaggagtttgagaccagcttgagcaacatggtaaagccccatctctacaaaatacacaaaagtcTGTAgtgtgtgatggcacatgcctgtggtcccagctactccagaggctgaagtgggaggattgcttgagcccaggaggtcgaggctgcagtgagccatgattgggccactgcattccagcctgggtgacaaagtaagatcctgtct-----ca-aaaaaaaaaaaaaaaag----caaaagt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4907537 319 + 91754291 aaataaataCTTTggccaggtactgtggctcatgcctgtaatctcagcactttggaaggctgaggcaggcagattgttttagcccaggagtttgagaccagcttgagcaacatggtaaagccccatctctacaaaatacacaaaagtctgtagtgtgtggtggcacatgcctgtggtcccggctactccagaggctgaagtgggaggatcgcttgagcccaggaggtcgaggctgcagtgagccatgattgggccactgcattccaacctgggtgacaaagtaagatcctgtct------c-aaaaaaaaaaaaaaaaG----CGAAAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92386449 323 - 98464013 AAAGAAATATTTTggccaggccttgtgactcatgcctgtaatctcaacacttgggaaggctaaggcaggcagattgcttgagcccaggagtttgagacaggactgagcaccatggtgaagtcccatctctacaaaaaatacaaaaatttgtagggtgtggtggcacacgcctgtggtcccagctactccagaggctgaggtgggaggattgcttgggccaaggaggtagaggttgcagtgagccatgacagtgccactgcactccagcctgggtgacaaagtgagatcctgtct------c-ataaagaaagaaaaaagaaagaaaGAGA i calJac3.chr15 C 0 C 0 e canFam3.chr34 24766846 0 - 42124431 C a score=369775.000000 s hg38.chr3_KI270781v1_alt 28939 105 + 113034 aa-------aGAAATACTTTGATGACTGAGAAGAGCTCTTATAAAGAGTTTCATATTAATAATTTTACCATAAAAATAAAATTAATAAAGTTTCA--GAACATTTGAAAAATAC s panTro4.chr3 13779179 105 - 202329955 aa-------AGAAATACTTTGATGACTGAGAAGAGCTCTTATAAAGAGTTTCATGTTAATAATTTTACCATAAAAATAAAATTAATAAAGTTTCA--GAACATTTGAAAAATAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761360 104 - 202140232 aa-------agaaaTACTTTGATGACTGAGAAGAGCTCTTATAAAGAGTTTCATGTTAATAATTTTACCAT-AAAATAAAATTAATAAAGTTTCA--GAACACTTGAAAAATAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318699 104 - 123690457 aa-------ATAAATACTTTGATGACTGAGAAGAACTTTTATAAAGAGTTTCATGTTAATAATTTTACCAT-AAAATAAAATTAATAAAGTTTCA--GAACATTTGAAAAATAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602683 104 + 192599291 AA-------AGAAATACTTCGATGACTGAGAAGGGCTCTTACAAAGAGTTTCATGTTAATAATTTTACCAT-AAAATAAAATTAATAAAGTTTTA--GAACATTTGAAAAATAC i rheMac3.chr2 C 0 I 126 s macFas5.chr2 103244019 104 - 192460366 aa-------agaaATACTTCGATGACTGAGAAGGGCTCTTACAAAGAGTTTCATGTTAATAATTTTACCAT-AAAATAAAATTAATAAAGTTTTA--GAACATTTGAAAAATAC i macFas5.chr2 C 0 I 126 s papAnu2.chr2 101040500 104 + 187378091 aa-------agaaATACTTCGATGACTGAGAAGGGCTCTTACAAAGAGTTTCATGTtaataattttaccat-aaaataaaattaataaagtttca--gaacatttgaaaaatac i papAnu2.chr2 C 0 I 127 s chlSab2.chr15 4907856 104 + 91754291 AA-------AGAAATACTTCGATGACTGAGAAGGGCTCTTACAAAGAGTTTCATGTTAATAATTTTACCAT-AAAATAAAATTAATAAAGTTTTA--GAACATTTGAAAAATAC i chlSab2.chr15 C 0 I 123 s calJac3.chr15 92386772 111 - 98464013 GAGAGAAACGGAAATACTTTGATGACTGAGAAGAGCACTTACAAAGAGTTTTGTGTTAATAATTTTGCCat-aaaataaaattaataaaatttCA--GAACATTTGAAAAATAC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24766846 106 - 42124431 AA-------AGAAATGTTTTAATGACTGAGAAGAGCTCTTACAAAATGTTTCAGGTTGACAATTTTGTCAT-AAAATTAAATTACTAAAGCCTCAGGGAACATTTGAAAAAAAA i canFam3.chr34 C 0 C 0 a score=23472.000000 s hg38.chr3_KI270781v1_alt 29044 6 + 113034 AAAAAA s panTro4.chr3 13779284 6 - 202329955 AAAAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761464 6 - 202140232 AAAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318803 6 - 123690457 AAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602913 6 + 192599291 AAAAAA i rheMac3.chr2 I 126 C 0 s macFas5.chr2 103244249 6 - 192460366 aaaaaa i macFas5.chr2 I 126 C 0 s papAnu2.chr2 101040731 6 + 187378091 aaaaaa i papAnu2.chr2 I 127 C 0 s chlSab2.chr15 4908083 6 + 91754291 AAAAAA i chlSab2.chr15 I 123 C 0 s calJac3.chr15 92386883 6 - 98464013 AAAAAA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24766952 6 - 42124431 AAAAAA i canFam3.chr34 C 0 I 33 a score=16248.000000 s hg38.chr3_KI270781v1_alt 29050 6 + 113034 GCGTAG s panTro4.chr3 13779290 6 - 202329955 GCGTAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761470 6 - 202140232 GTGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318809 6 - 123690457 GTGGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602919 6 + 192599291 GTGGAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244255 6 - 192460366 GTGGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101040737 6 + 187378091 gtggag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908089 6 + 91754291 GTGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92386889 6 - 98464013 GTGGAG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24766958 33 - 42124431 I a score=736802.000000 s hg38.chr3_KI270781v1_alt 29056 241 + 113034 ACAGAAATTGCCACATTTTGGTGTCTTCATATCCTACTTACTTCTCCATGCATTAAATAATTGTGTCATTGATTTCAAGTTTTCACATAGTCCCTA---ATTACAAAGGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACATTACCCCATTGCCTTATTACCTG-------------------------------------GAGTGCCCCACTATGGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA s panTro4.chr3 13779296 241 - 202329955 ACAGAAATTGCCACATTTTGGTGTCTTCATATCCTAGTTACTTCTCCATGCATTAAATAATTGTGTCATTGATTTCAAGTTTTCACATAGTCCCTG---ATTACAAAGGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACATTACCCCATTGCCTTATTACCTG-------------------------------------GAGTGCCCCACTATGGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761476 241 - 202140232 ACAGAAATTGCCACATTTTGGTGTCTTCATATCCTAGTTTTTTCTCCATGCATTAAATAATTGTGTCATTGATTTCAAGTTTTCACATAGTCCCTG---ACTACAAAAGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACATTACCCCATTGCTTTATTACCTG-------------------------------------GAGTGCCCCACTATGGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGATGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14318815 241 - 123690457 ACAGAAATTGCCACATTTTGGTGTCTTCATATCCTAGTTTTTTCTCCATTCATTAAATAATTGTGTCATTGATTTCAAGTTTTCACATAGTCCCTG---ATTACAAAAGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACATTACCCCATTGCCTTATTACCTG-------------------------------------GAGTGCCCCAGTATGGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103602925 244 + 192599291 ACAGAAATCACCACATTTTGTTGTCTTCATACCCCAGTTTTTTCTCCATGCATTAAATAATCATGTCATTGATTTCAAGTTTTCACATAGTCTCTGACAATTACAAAAGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACGTGACCCCATTGCCTTACTACCTG-------------------------------------GAATGCCCCACTACAGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244261 244 - 192460366 ACAGAAATCACCACATTTTGTTGTCTTCATACCCCAGTTTTTTCTCCATGCATTAAATAATCATGTCATTGATTTCAAGTTTTCACATAGTCTCTGACAATTACAAAAGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACGTGACCCCATTGCCTTACTACCTG-------------------------------------GAATGCCCCACTACAGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101040743 240 + 187378091 acaGATATCACCACATTTTGTTGTCTTCATACCCCAGTTTTTTCTCCATGCATTAAAT----GTGTCATTGATTTCAAGTTTTCACATAGTCTCTGacaattacaaaagtaatacttATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACGTGACCCCATTGCCTTACTACCTG-------------------------------------GAATGCCCCACTACAGTTCATCatggc-a--------------aaaaacaaaatcagattcTGGCTAGGAAGACAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908095 244 + 91754291 ACAGAAATCACCACATTTTGTTGTCTTCATACCCCAGTTTTTTCTCCATGCATTAAATAATCGTGTCATTGATTTCAAGTTTTCACATAGTCTCTGACAATTACAAAAGTAATACTTATTCATTGCAAAATGCAGAAAAAGATGGATAAGGAAAGATACATGACCCCATTGCCTTACTATTTG-------------------------------------GAATGCCCCACTACAGTTCATCATGGC-A--------------AAAAACAAAATCAGATTCTGGCTAGGAAGACAA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92386895 241 - 98464013 GCGGAAATCACCACATTTTGATGTCTTCATACCCTAGTCTGTTCTCCACGCATTAAATAATTGTGTCATTGATTTCAAATTTTCAGATAGTCTCTG---ATTACAAAAATAATACTTATCCATTGCAAAATGCCGAAAAAGATGGATAAGAAAAGATACATTA-CCCATCACCACCTTAGCTG-------------------------------------GAATGCCCCACTGCGGTTCATCGTGGCAA--------------AAAAACAAAATCGGATTCTGGCTAGGAAAACAA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24766991 268 - 42124431 GTAGAAATTACTGCATTTTGATGCCTGTATATTCAAGCTTTTCCTCCATGCATTAAATAATTGCATC----ATTTCAAATTTTCagacaaaccatg-----------agagactctta-actctgggaaacgaacaaagggttgcagaaggggaggcgggctggtggatggggtaactaggtgacaggcactgaggaggacacttgatgggatgagcacagggtgttctactata---tatgttggc-aaagtgaacttcaataaaaacaaaacaaaa--------aaaaaaaCAA i canFam3.chr34 I 33 I 138 a score=478415.000000 s hg38.chr3_KI270781v1_alt 29297 155 + 113034 TTACTGAAtgttatgatttgaatgtgtcccctccaaaattcagcttttgccagtgtgatagtattaagagatggggcctttaagaggtgactagtccgtgatactcctcatgaatgggattaagaatccttataaaggtgcttgacagaaaaacc s panTro4.chr3 13779537 155 - 202329955 TTACTGAAtgttatgatttgaatgtgtcccctccaaaattcagcttttgccaatgtgatagtattaagagatggggcctttaagaggtgactagtccgtgatactcctcatgaatgggattaagaatccttataaaggtgcttgacagacgaacc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761717 155 - 202140232 TTACTGAAtgttatgatttgaatgtgtcccctccaaaattcagctgttgccaatgtgatagtattaagagatggggcctttaagaggtgactaggccgtgatactccttgtgaatgggattaagaatccttataaaggtgcttgacagaagaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319056 155 - 123690457 TTACTGAAtggtatgatttgaatgtgtctcctccaaaattcagctgttgccaatgtgatagtattaagagatagggcctttaagaggtgactaggccgtgatactccttgtgaatgggattaaaaatccttataaaggtgcttgacagacaaacc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603169 155 + 192599291 TTACCGAAtgttatgatttgaatgtgtcccctccaaaattcagctgttgccaatgtgatagtattaagagatgaggcctttaagaggtgactagaccatgacactccttgtgaatgggattaagaatccttataaaggtgcttgatagacgaacc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244505 155 - 192460366 TTACCGAAtgttatgatttgaatgtgtcccctccaaaattcagctgttgccaatgtgatagtattaagagatgaggcctttaagaggtgactagaccatgacactccttgtgaatgggattaagaatccttataaaggtgcttgacagacgaacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101040983 155 + 187378091 TTACCGAATgttatgatttgaatgtgtcccctccaaaattcagctattgccaatgtgatagtattaagagatggggcctttaagaggtgactagACCATGACActccttgtgaatgggattaagaATCCTTATAAAGGTGCTTGAGAGACGAACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908339 155 + 91754291 TTACCGAAtgttatgatttgaatgtgtcccctccaaaattcaactgttgccaatgtgatagtattaagagatggggcctttaagaggtgactagaccatgacactccttgtgaatgggattaagaatccttataaaggtgcttgacagacgaacc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92387136 155 - 98464013 TTATTGAAtgttatgatttgaatgtgtcccctccaaaattcagctgttgctaatgtgacactattaggagatggggcctttaagaggtgacgaggccatgatactccttgcaaatgagattaagagtccttataaaggtgcttgccagaggaacc i calJac3.chr15 C 0 C 0 e canFam3.chr34 24767259 138 - 42124431 I a score=113739.000000 s hg38.chr3_KI270781v1_alt 29452 34 + 113034 tggttctctcttgcacttctgcttttccaccatg s panTro4.chr3 13779692 34 - 202329955 tggttctctcttgcacttctgcttttccaccatg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761872 34 - 202140232 tggttctctcttgcacttctgcttttccaccatg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319211 34 - 123690457 tggttctctcttgcacttctgcttttccaccatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603324 34 + 192599291 tggttctctcttgcacttctgcttttccaccatg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244660 34 - 192460366 tggttctctcttgcacttctgcttttccaccatg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101041138 34 + 187378091 TGGTTCTCTCTTGCACTTCTGCTTTTCCACCATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908494 34 + 91754291 tggttctctcttgcacttctgcttttccaccatg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92387291 34 - 98464013 tggtgctcccttgcacttctgcttttccaccgtg i calJac3.chr15 C 0 I 671 s canFam3.chr34 24767397 26 - 42124431 tggagcccacttctccctctgcctgt-------- i canFam3.chr34 I 138 C 0 a score=154973.000000 s hg38.chr3_KI270781v1_alt 29486 49 + 113034 tggggacatgaggtttcttcccttttgtccttc-caccttctgcctgcat s panTro4.chr3 13779726 49 - 202329955 tgggcgcatgaggtttcttcccttttgtccttc-caccttctgcctgcat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761906 49 - 202140232 tgggggcatgaggtttcttcccttttgtccttc-caccctctgcctgcat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319245 49 - 123690457 tggggacatgaggtttcttcccttttgtccttc-caccttctgcctgcat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603358 49 + 192599291 tggggacatgaggtttcttcccttttgtccctc-caccttctgcctgcat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244694 49 - 192460366 tggggacatgaggtttcttcccttttgtccctc-caccttctgcctgcat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101041172 49 + 187378091 TGGGGACATGAGGTTTCTTCCCTTTTGTCCCTC-CACCTTCTGCCTGCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908528 49 + 91754291 tggggacatgaggtttcttcccttttgtccctc-caccttctgcctgcat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92387996 47 - 98464013 TGGGCACACGAGGTTTCTTCTC--TTGTCTTTC-CACCTTCTGCCTGTGT i calJac3.chr15 I 671 C 0 s canFam3.chr34 24767423 38 - 42124431 ------------gtctctgcctctcagtctctctctctctctctctgaat i canFam3.chr34 C 0 I 64 a score=147851.000000 s hg38.chr3_KI270781v1_alt 29535 47 + 113034 cacatggtagtgccttgatcttggacttcccagcccgaagaactcta s panTro4.chr3 13779775 47 - 202329955 cacatggtagtgccttgatcttggacttaccagcccgaagaactcta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13761955 47 - 202140232 cacatggcagtgccttgatcttggacttcccagcccaaggaactcta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319294 47 - 123690457 cacatggcagtgccttgatcttggacttcccagcctgaagaactcta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603407 47 + 192599291 cacatggcagtgccttgatcttggacttcccagcccaaggaactgta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244743 47 - 192460366 cacatggcagtgccttgatcttggacttcccagcccaaagaactgta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101041221 47 + 187378091 CACATggcagtgccttgatcttggacttcccagcccaaagaactgta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4908577 47 + 91754291 cacatggcagtgccttgatcttggacttcccagcccaaagaactgta i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92388043 47 - 98464013 CACATGGCAgtgccttgatcttggactttccagcccaaagaactgta i calJac3.chr15 C 0 C 0 e canFam3.chr34 24767461 64 - 42124431 I a score=76674.000000 s hg38.chr3_KI270781v1_alt 29582 23 + 113034 agaaataaatttctgtt--ctttat s panTro4.chr3 13779822 23 - 202329955 agaaataaatttctgtt--ctttgt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762002 23 - 202140232 agaagtaaatttctgtt--ctttat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319341 23 - 123690457 agaaataaatttctgtt--ctttat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603454 23 + 192599291 agaaataaatttccgtt--ctttat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244790 23 - 192460366 agaaataaatttccgtt--ctttat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101041268 23 + 187378091 agaaataaatttccgtt--ctttat i papAnu2.chr2 C 0 I 310 s chlSab2.chr15 4908624 23 + 91754291 agaaataaatttccatt--ctttat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92388090 23 - 98464013 agaaataaatttccatt--ctttat i calJac3.chr15 C 0 C 0 s canFam3.chr34 24767525 25 - 42124431 AGAGACAAATTACTTATGGCTTTAT i canFam3.chr34 I 64 C 0 a score=1790741.000000 s hg38.chr3_KI270781v1_alt 29605 552 + 113034 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaccaaaac-aCTGAAAATATT-AAAAATAACATATTCCATCAACAGAGG--------TTATCAGGGTCTTGGCTTTTATTGAGCTCCTCCTTT-GTTTTTTATG-------TGATGGAGTGACTCACACATGCAGTCGGATATGGTATGGCTGGCCTCTAATGCTAATTTAATCTTGGATTAAATGTTACTTTCTTAGACATCGTCTCTGATGGTTCAATCTGAAAGAGCTACTCGCTATTTCAATAGCCTTAATTTAAGTA-TTTTTTGGC----AGGGAGGAGGGAGTTTGCCAttattatttatcattctctatcattttttcttttttaattgtgcatttatttgtttcttCCctgtctttttcattattgtatcctcggggcctagaaaaatgtctggaatttggaagttttattattgaataaataaatAAATCAAATATCCTTTAGTGATCATGCCTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACTGGACCC-AAGCCTAAGAAAACAACCTGGTG s panTro4.chr3 13779845 552 - 202329955 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaccaaaac-aCTGAAAATATT-AAAAATAACATATTCCATCAACAGAGG--------TTATCAGGGTCTTGGCTTTTATTGAGCTCCTCCTTT-GTTTTTTATG-------TGATGGAGTGACTCACACATGCAGTCAGATATGGTATGGCTGGCCTCTAATGCTAATTTAATCTTGGATTAAATGTTACTTTCTTAGACATCGTCTCTGATGGTTCAATCTGAAAGAGCTACTCACTATTTCAATAGCCTTAATTTAAGTA-TTTTTTGGC----AGGGAGGAGGGAGTTTGCCATTATTATTTATCATTCTCTATCATTTTTTCTTTTTTAATTGTGCATTTATTTGTTTCTTCCCTGTCTTTTTCATTATTGTATCCTTGGGGCCTAGAAAAATGTCTGGAATTTGGAAGTTTTATTATTGAATAAATAAATAAATCAAATATCCTTTAGTGATCATGCCTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACTGGTCCC-AAGCCTAAGAAAACAACCTGGTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762025 552 - 202140232 -------------------aaattacccagtctcaggtatt---ctgttatagcagcacaaaacagaccaaaac-aCTGAAAATATT-AAAAATAACATATGCCATCAATGGAGA--------TTATCAGGGTCTTGGCTTTTATTGAGCTCCTCCTTT-GTTTTTTGTG-------TGATGCAGTGACTCACACATTCAGTCAGATATGGCATGGCTGGCCCCTAATGCTAATTTAATCTTGGATTAAATGTTACTTTCTTAGACATCGTCTCTGATGGTTCAATCTGAAAGAGCTACTCACTATTTCAATAGCCTTAATTTAAGTA-TTTTTTGGT----AGGGAGGAGGGAATTTGCCATTATTATTCATCATTCTCTATCATTTTTTCTTTTTTAATTGTGCATTTATTTGTTTCTTCCctgtctttttcattattgtatcctcagggcctagaaaaatgtctgaaatttggaagttttattattgaatgaataaatAAATCAAATATCCTTTAGTGATCATGCCTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACTGGACCC-AAGCCTAAGAAAACAATCTGGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319364 552 - 123690457 -------------------aaattacccagtctcaggtatt---ctgttatagcagcacaaaacagaccaaaac-aCTGAAAACATT-AAAAATAACATATGCCATCAATGGAGG--------TTATCAGGGTCTTGGCTTTTATTGAGCTCCTCCTTC-GTTTTTTATG-------CGATGGAGTGACTCACACATTCAGTcagatatggcatggctggcccctaatgctaatttaatcctggattaaatgttactttcttagacatcgtctctgatggttcaatctgaaagagctactccctATTTCAATAGCCTTAATTTAAGTA-TTTTTTGGC----AGGGAGGAGGGAGTTTGCCATTATTATTTATCATTCTCTATCATTTTTTCTTTTTTGATTGTGCATTTATTTGTTTCTTCCctgtctttttcattattgtatccttggggcctagaaaaatatctggaatttggaagttttattactgaatgaataaatAAATCAAATATCCTTTAGTGATCATGCCTACTTAGGATTATGGAAGTGTTTTTCTTTAACTACCACCGGACCC-AAGCCTAAAAAAACAACCTGGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103603477 553 + 192599291 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaacaaaac-aCTGAAAATATTAAAAAATAACACATGCCATCAATGGAGG--------TTATCAGGGTCTTTGCTTTTATTGAGCTCCTCCTTT-GTTTTTTATG-------CAATGGAGTGACTCACACATTCAGTCAGATATTGCATGACTGATCCCTAATGCGAATTTAATCTTGGATTAAATGTCACTTTCTTAGACATTTTCTCTGATAATTCAATCTGAAAGAGCTACTCACTATTTCAATAACCTTAATTTAAGTGTTTTTTTGGC----AGGGAGGAAGGAGTTTGCCATTATTATTTATCATTCTCTATTA-TTTTTCCTTTTTAATTCTGTATTTATTTGTTTCTTCCCTGTCCTTTTCATTATTGTATCCTTGTGGCCTAGAAAAATGTCTGGAATTTGGAAGTTTTTTTATTGAATGAATAAATAAATCAAATATCCTTTAGTAATCATGACTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACCGGACAC-GAGCCTAAGAAAACAACCTGGTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103244813 553 - 192460366 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaacaaaac-aCTGAAAATATTAAAAAATAACACATGCCATCAATGGAGG--------TTATCAGGGTCTTTGCTTTTATTGAGCTCCTCCTTT-GTTTTTTATG-------CAATGGAGTGACTCACACATTCAGTCAGATATTGCATGACTGATCCCTAATGCGAATTTAATCTTGGATTAAATGTCACTTTCTTAGACATTTTCTCTGATAATTCAATCTGAAAGAGCTACTCACTATTTCAATAACCTTAATTTAAGTGTTTTTTTGGC----AGGGAGGAGGGAGTTTGCCAttattatttatcattctctatta-tttttcttttttaattgtgtatttatttgtttcttccctgtccttttcattattgtatccttgtggcctagaaaaatgtctggaatttggaagtttttttattgaatgaataaatAAATCAAATATCCTTTAGTAATCATGACTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACCGGACAC-GAGCCTAAGAAAACAACCTGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101041601 553 + 187378091 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaacaaaac-actgaaaatattaaaaaataacacatgccATCAATGGAGG--------TTATCAGGGTCTTTGCTTTTATTGAGCTCCTCCTTT-GTTTTTTATG-------CAATGGAGTGACTCACACATTCAGTCAGATATTGCATGACTGACCCCTAATGCGAATTTAATCTTGGATTAAATCTCACTTTCTTAGACATCTTCTCTGATAATTCAATCTGAAAGAGCTACTCACTATTTCAATAACCttaatttaagtatttttttggc----agggaggagggagtttgccattattatttatcattctctatta-tttttcttttttaattgtgtatttatttgtttcttctctgtccTTTTCATTATTGTATCCTTGTGGCCTAGAAAAATGTCTGGAATTTGGAAGTtttattattgaatgaataaataaatcaaatatccTTTAGTAATCATGACTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACCGGACAC-GAGCCTAAGAAAACAACctggtg i papAnu2.chr2 I 310 I 329 s chlSab2.chr15 4908647 557 + 91754291 -------------------aaattacccagtctcaggcatt---ctgttatagcagcacaaaacagaacaaaac-aCTGAAAATATTAAAAAATAACACATGCCATCAGTGGAGG--------TTATCAGGGTCTTTGCTTTTATTGGGCTCCTCCTTT-GTTTTTTATA-------CAATGGAGTGACTCACACATTCAGTCAGATATTGCATGACTGACCCCTAATGCGAATTTAATCTTGGATTAAATGTCACTTTCTTAGACATCTTCTCTGATGATTCAATCTGAAAGAGCTACTCACTATTTCAATAACCTTAATTTAAGTATTTTTTTGGCAGGGAGGGAGGAGGGAGTTTGCCAttattatttatcatcctctatta-tttttcttttttaattgtgtatttatctgtttcttCCCTGTCCTTTTCATTATTGTATCCTTGTGGCCTAGAAAAATGTCTGGAATTTGGAAGTTTTATTATTGAATGAATAAATAAATCAAATATCCTTTAGTAATCATGACTACTTAGGATTATGGAAGTGTCTTTCTTTAACTACCACCGGACAC-GAGCCTAAGAAAACAACCTGGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92388113 548 - 98464013 -------------------aaattacccagtctcagttatt---ctgttatagcagcacaaaacagaccaaaac-aCTGAAAATAC--AAAAATAACATATACCATCAATGGGGGA-------TTATCAGGGTCTTTGCTTTTATTGAGCTCCTCCTTT-GTTTTTTACGTGTTTTTTGATGGAGTGACTCGTACATTCAGTcagatattgcatggctggcccc-aatgccaatttaatcttcgattaaatgttgctttcttagacatctactctgatggtttaatctgaaagagcTA----CTATTTCAATAGCCTTAATTTAAGTG---TTTTGGC----AGGGAGGAGGGAATTTGTC---ATCATTTATCATTCTCAGCCACTTTTTATTTTCTAATTGTGTATTTATTggtttcttgcctatctttttcattattgtatcctcagggcctagaacaatgtctggaattgggaagttttattattggattaataaataaatC-AGTATCCTTTAGTGATCCTGCCTACTTGGGATTATGGAAGTGTCTTTCTTTACCTACCACTGGTCAC-AGCCCTAAGAAAACAACCTGGTG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24767550 544 - 42124431 GACCTGAAGAGCCCCCAACAAGGTTCTCAATGGCAAAAACCAAAATGTGATACTAGTTAGGAAGAGAAAGACATAACTGGAAAGATT-GTAAATAGGATACATTGTCTATAGGGAGTGGTATTTTACTACAGTCTTTGATTTCATTTATCTCCTCCTCTAGGTCTTTATG-------TGATAAAGTTATCCAAACATTCAGTCAGATATTGCATGGCTGGACTGTAATACCAATTTGATCTTGGTTTGAATGTTTTTTTCTT------------TTATGGCTCAATCTGAAGGATTCACTCACTATTGCAATTGCCTTAATA-------TTTTCTG------AGGG---------------CTTATTATTTAACATCCTCTACCATTTTTTCTTGTTTACTTGCATATTTATTTGTTTCTTATCTCTCTTCTTCATTGTGGTATCCTTAGGGCC---AGAAGTTTCTGACA-TGAGTAGTATTATTGTTGAATGAAAAAATGAATCAG--Agcctttagtggtcctgcctacataggattgtgaaagtgtcttcctttaactatcatgagatacaaagtctaagaagacaacctggtg i canFam3.chr34 C 0 C 0 a score=34512.000000 s hg38.chr3_KI270781v1_alt 30157 16 + 113034 AAGCACCTGGATTTCG s panTro4.chr3 13780397 16 - 202329955 AAGCACCTGGATTTCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762577 16 - 202140232 AAGCACCTGGATTTCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319916 16 - 123690457 AAGCACCTGGATTTCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103604030 16 + 192599291 AAACACGCGGATTTCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245366 16 - 192460366 AAACACGCGGATTTCA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4909204 16 + 91754291 AAACACGCGGATTTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92388661 16 - 98464013 GAGCACCTCAATTTTG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24768094 16 - 42124431 aggcacctgcttttca i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101042154 329 + 187378091 I a score=18783.000000 s hg38.chr3_KI270781v1_alt 30173 14 + 113034 GCCACACCCCTCTG------ s panTro4.chr3 13780413 14 - 202329955 GCCGCACCCCTCTG------ i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762593 14 - 202140232 GCCGCACCCCTCTG------ i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319932 14 - 123690457 GCCGCACCCCTCTG------ i nomLeu3.chr11 C 0 T 24 s rheMac3.chr2 103604046 14 + 192599291 GCCACACCTCTCTA------ i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245382 14 - 192460366 GCCACACCTCTCTA------ i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4909220 12 + 91754291 GCCACAC--CTCTA------ i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24768110 20 - 42124431 tctacacctcttcctcccta i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101042154 329 + 187378091 I e calJac3.chr15 92388677 0 - 98464013 C a score=12222.000000 s hg38.chr3_KI270781v1_alt 30187 6 + 113034 CCTCCT s panTro4.chr3 13780427 6 - 202329955 CCTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762607 6 - 202140232 CCTCCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103604060 6 + 192599291 CCTCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245396 6 - 192460366 CCTCCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4909232 6 + 91754291 CCTCCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24768130 6 - 42124431 cctcct i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101042154 329 + 187378091 I e calJac3.chr15 92388677 0 - 98464013 C e nomLeu3.chr11 14319946 24 - 123690457 T a score=2800.000000 s hg38.chr3_KI270781v1_alt 30193 1 + 113034 C s panTro4.chr3 13780433 1 - 202329955 C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762613 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319922 1 - 123690457 C i nomLeu3.chr11 T 24 C 0 s rheMac3.chr2 103604066 1 + 192599291 C i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245402 1 - 192460366 C i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4909238 1 + 91754291 C i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24768136 1 - 42124431 c i canFam3.chr34 C 0 I 914 e papAnu2.chr2 101042154 329 + 187378091 I e calJac3.chr15 92388677 0 - 98464013 C a score=4011.000000 s hg38.chr3_KI270781v1_alt 30194 2 + 113034 TG s panTro4.chr3 13780434 2 - 202329955 TG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762614 2 - 202140232 TG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319923 2 - 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103604067 2 + 192599291 TG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245403 2 - 192460366 TG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4909239 2 + 91754291 TG i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101042154 329 + 187378091 I e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=89240.000000 s hg38.chr3_KI270781v1_alt 30196 47 + 113034 GATTTCGGCCACACCTCTCTACCTCCTCTGGATTTCAGCCAC------------------------------ACCTC s panTro4.chr3 13780436 77 - 202329955 GATTTTGGCCGCACCCCTCTGCCTCCTCTGGATTTCATCCACGCCTCTCTGTCTCCTCTGGATTTCATCCATGCCTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762616 47 - 202140232 GATTTCGGCCACACCCCTCTGCCTCCTCGGGATTTCATCCAC------------------------------ACCCC i ponAbe2.chr3 C 0 T 60 s nomLeu3.chr11 14319925 47 - 123690457 GATTTCGGCCGCACCCCTCTGCCTCCTCTGGATTTCATCCAC------------------------------ACCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103604069 47 + 192599291 GATTTCAGCCACACCTCTCTACCTCCTCTGGATTTCAGCCAC------------------------------ACCTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245405 47 - 192460366 GATTTCAGCCACACCTCTCCGCTTCCTCTGGATTTCAGTCAC------------------------------ACCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042483 47 + 187378091 GATTTCAGCCACACCTCTCTACCGCCTCTGGATTTCAGCCAC------------------------------ACCTC i papAnu2.chr2 I 329 C 0 s chlSab2.chr15 4909241 43 + 91754291 GATTTCAGCCACACCTCTCTGCCTCCTCTGTATC----ACAC------------------------------ACCTC i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=19319.000000 s hg38.chr3_KI270781v1_alt 30243 13 + 113034 TCTACCTCCTCTG s panTro4.chr3 13780513 13 - 202329955 TCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762603 13 - 202140232 TCTGCCTCCTCTG i ponAbe2.chr3 T 60 C 0 s nomLeu3.chr11 14319972 13 - 123690457 TCTACCTCCTCTG i nomLeu3.chr11 C 0 T 60 s rheMac3.chr2 103604116 13 + 192599291 TCTATCGCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245452 13 - 192460366 TCTGCCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042530 13 + 187378091 TCCGCCTCCTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909284 4 + 91754291 TCTG--------- i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=34900.000000 s hg38.chr3_KI270781v1_alt 30256 21 + 113034 GATTTTGGCCACACCTCTCTA s panTro4.chr3 13780526 21 - 202329955 GATTTCAGCCACACCTCTCTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762616 21 - 202140232 GATTTCGGCCACACCCCTCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319925 21 - 123690457 GATTTCGGCCGCACCCCTCTG i nomLeu3.chr11 T 60 C 0 s rheMac3.chr2 103604129 21 + 192599291 GATTTCAGTCACACCTCTCTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103245465 21 - 192460366 GATTTCAGCCACACCTCTCTA i macFas5.chr2 C 0 I 591 s papAnu2.chr2 101042543 21 + 187378091 GATTTCAGCCACACCTCTCCG i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4909288 0 + 91754291 C e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=12950.000000 s hg38.chr3_KI270781v1_alt 30277 6 + 113034 CCTCCT s panTro4.chr3 13780547 6 - 202329955 TGTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762637 6 - 202140232 CCTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319946 6 - 123690457 CCTCCT i nomLeu3.chr11 C 0 T 30 s rheMac3.chr2 103604150 6 + 192599291 CCTCCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246077 6 - 192460366 CCTCCT i macFas5.chr2 I 591 C 0 s papAnu2.chr2 101042564 6 + 187378091 CCTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909288 6 + 91754291 CCTCCT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=25166.000000 s hg38.chr3_KI270781v1_alt 30283 12 + 113034 CTGGATTTCAGC s panTro4.chr3 13780553 12 - 202329955 CGGGATTTCAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762643 12 - 202140232 CGGGATTTCATC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319922 12 - 123690457 CTGGATTTCGGC i nomLeu3.chr11 T 30 C 0 s rheMac3.chr2 103604156 12 + 192599291 CTGGATTTCCAC i rheMac3.chr2 C 0 I 2665 s macFas5.chr2 103246083 12 - 192460366 CTGGATTTCAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042570 12 + 187378091 CTGGATTTCAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909294 12 + 91754291 CTGGATTTCAGC i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=41192.000000 s hg38.chr3_KI270781v1_alt 30295 18 + 113034 CACACCTCTCTACGTCCT s panTro4.chr3 13780565 18 - 202329955 CACACCTCTCTACGTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762655 18 - 202140232 CACACCCCTCTGCCTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319934 18 - 123690457 CGCACCCCTCTGCCTCCT i nomLeu3.chr11 C 0 T 30 s rheMac3.chr2 103606833 18 + 192599291 CACACCTCTCTGCCTCCT i rheMac3.chr2 I 2665 C 0 s macFas5.chr2 103246095 18 - 192460366 CACACCTCTCTGCCTCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042582 18 + 187378091 CACACCTCTCCGCCTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909306 18 + 91754291 CACACCTCTCTGCCTCCT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=64134.000000 s hg38.chr3_KI270781v1_alt 30313 33 + 113034 CTGGATTTCAGCCACACCTCTCTAC------------------------------------------------------------CTCCTCTG s panTro4.chr3 13780583 93 - 202329955 CTGGATTTCAGCCACACCTCTCTACGTCCTCTGGATTTCATCTGCACCCCTCTGCCTCCTCTGGATTTCATCCGTACCCCTCTGTCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762673 33 - 202140232 CTGGATTTCAGCCACACCTCTCTAC------------------------------------------------------------CTCCTCTG i ponAbe2.chr3 C 0 T 60 s nomLeu3.chr11 14319922 33 - 123690457 CTGGATTTCGGCCGCACCCCTCTGC------------------------------------------------------------CTCCTCTG i nomLeu3.chr11 T 30 C 0 s rheMac3.chr2 103606851 33 + 192599291 CTGGATTTCAGCCACACATCTCTAC------------------------------------------------------------CTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246113 33 - 192460366 CTGGATTTCAGCCACACCTCTCTGC------------------------------------------------------------CTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042600 33 + 187378091 CTGGATTTCAGCCACACATCTCTAC------------------------------------------------------------CTCCTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909324 33 + 91754291 CTGGATTTCAGTCAGACCTCTCTAC------------------------------------------------------------CTCCTCTG i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=64749.000000 s hg38.chr3_KI270781v1_alt 30346 30 + 113034 GATTTCATCCACGCCTCTCTACCTCCTCTG s panTro4.chr3 13780676 30 - 202329955 GATTTCATCCATGCCTCTCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762646 30 - 202140232 GATTTCATCCACACCCCTCTGCCTCCTCTG i ponAbe2.chr3 T 60 C 0 s nomLeu3.chr11 14319955 30 - 123690457 GATTTCATCCACACCTCTCTACCTCCTCTG i nomLeu3.chr11 C 0 T 60 s rheMac3.chr2 103606884 30 + 192599291 GATTTCAGCCACACCTCTCTGCCTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246146 30 - 192460366 GATTTCAGCCACACCTCTCTGCCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042633 30 + 187378091 GATTTCAGCCACACATCTCTATCGCCTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909357 30 + 91754291 GATTTCAGTCAGACCTCTCTACCGCCTCTG i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=62198.000000 s hg38.chr3_KI270781v1_alt 30376 27 + 113034 GATTTCAGTCACGCCTCTCTACCTCCT s panTro4.chr3 13780706 27 - 202329955 GATTTCAGCCACACCTCTCTACGTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762676 27 - 202140232 GATTTCAGCCACACCTCTCTACCTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319925 27 - 123690457 GATTTCGGCCGCACCCCTCTGCCTCCT i nomLeu3.chr11 T 60 T 30 s rheMac3.chr2 103606914 27 + 192599291 GATTTCAGCCACACATCTCTACCTCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246176 27 - 192460366 GATTTCAGCCACACCTCTCTACCTCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042663 27 + 187378091 GATTTCAGTCAcacctctctgcctcct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909387 27 + 91754291 GATTTCGGCCACACCTCTCTACCTCCT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=8148.000000 s hg38.chr3_KI270781v1_alt 30403 3 + 113034 CTG s panTro4.chr3 13780733 3 - 202329955 CTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762703 3 - 202140232 CTG i ponAbe2.chr3 C 0 T 123 s nomLeu3.chr11 14319922 3 - 123690457 CTG i nomLeu3.chr11 T 30 C 0 s rheMac3.chr2 103606941 3 + 192599291 CTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246203 3 - 192460366 CTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042690 3 + 187378091 ctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909414 3 + 91754291 CTG i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=105052.000000 s hg38.chr3_KI270781v1_alt 30406 60 + 113034 GATTTCAGCCACACCTCTCTACCTCCTCTGGATTTCATCCACGCCTCTCTACCTCCTCTG s panTro4.chr3 13780736 60 - 202329955 GATTTCAGCCACACCTCTCTACGTCCTCTGGATTTCATCCACGCCTCTCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14319925 60 - 123690457 GATTTCGGCCGCACCCCTCTGCCTCCTCTGGATTTCATCCACACCTCTCTACCTCCTCTG i nomLeu3.chr11 C 0 T 60 s rheMac3.chr2 103606944 60 + 192599291 GATTTCAGCCACACCTCTCTACCTCCTCTGGATTTCAGCCACACCTCTCTACCTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246206 60 - 192460366 GATTTCAGCCACACCTCTCTACCTCCTCTGGATTTCAGCCACACCTCTCTACCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042693 60 + 187378091 gATTTCAGCCACACATCTCTACCTCCTCTGGATTTCAGCCACACATCTCTACCTCCTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909417 60 + 91754291 GATTTCAGTCAGACCTCTCTACCTCCTCTGGATTTCAGTCAGACCTCTCTGCCTCCTCTG i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13762706 123 - 202140232 T e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=45892.000000 s hg38.chr3_KI270781v1_alt 30466 27 + 113034 GATTTCAGCCACACCCCTCTGTCTCCT s panTro4.chr3 13780796 27 - 202329955 GATTTCAGCCACGCCTCTCTACCTCCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14319925 27 - 123690457 GATTTCGGCCGCACCCCTCTGCCTCCT i nomLeu3.chr11 T 60 T 30 s rheMac3.chr2 103607004 27 + 192599291 GATTTCAGCCACACCTCTCTGCCTCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246266 27 - 192460366 GATTTCAGCCACACCTCTCTGCCTCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042753 27 + 187378091 GATTTCAGTCACACCTCTCTATCGCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909477 27 + 91754291 GATTTCGGCCACACCTCTCTGCCTCCT i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13762706 123 - 202140232 T e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=82567.000000 s hg38.chr3_KI270781v1_alt 30493 40 + 113034 CTGGATTTTGGCCACACCTATCTACC------------------------------TCCTCTGGATTTCA s panTro4.chr3 13780823 70 - 202329955 CTGGATTTCAGCCACACCTCTCTACCTCCTCTGGATTTCAGCCACACCTCTCTACGTCCTCTGGATTTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762583 40 - 202140232 CTGGATTTCGGCCGCACCCCTCTGCC------------------------------TCCTCTGGATTTCG i ponAbe2.chr3 T 123 C 0 s nomLeu3.chr11 14319922 40 - 123690457 CTGGATTTCGGCCGCACCCCTCTGCC------------------------------TCCTCTGGATTTCA i nomLeu3.chr11 T 30 C 0 s rheMac3.chr2 103607031 40 + 192599291 CTGGATTTCAGCCACACATCTCTACC------------------------------TCCTCTGGATTTCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246293 40 - 192460366 CTGGATTTCAGCCACACCTCTCTGCC------------------------------TCCTCTGGATTTCA i macFas5.chr2 C 0 I 204 s papAnu2.chr2 101042780 40 + 187378091 CTGGATTTCAGTCACACCTCTCTGTC------------------------------TCCTGTGGATTTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909504 40 + 91754291 CTGGATTTCAGCCACACCTCTCTGTC------------------------------TCCTCTGGATTTCA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=45137.000000 s hg38.chr3_KI270781v1_alt 30533 20 + 113034 TCCACGCCTCTCTACCTCCT s panTro4.chr3 13780893 20 - 202329955 TCCACGCCTCTCTACCTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762623 20 - 202140232 GCCACACCCCTCTGCCTCCT i ponAbe2.chr3 C 0 T 60 s nomLeu3.chr11 14319962 20 - 123690457 TCCACACCTCTCTACCTCCT i nomLeu3.chr11 C 0 T 60 s rheMac3.chr2 103607071 20 + 192599291 GCCACACCTCTCTACCTCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246537 20 - 192460366 GCCACACCTCTCTGCCTCCT i macFas5.chr2 I 204 C 0 s papAnu2.chr2 101042820 20 + 187378091 GCCACacctctctaccacct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909544 20 + 91754291 GCCACACCTCTCTGCCTCCT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=51582.000000 s hg38.chr3_KI270781v1_alt 30553 33 + 113034 CTGGATTTCAGCCACACCCCTCTGTCTCCTCTG s panTro4.chr3 13780913 33 - 202329955 CTGGATTTCATCCACGCCTCTCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762583 33 - 202140232 CTGGATTTCGGCCGCACCCCTCTGCCTCCTCTG i ponAbe2.chr3 T 60 C 0 s nomLeu3.chr11 14319922 33 - 123690457 CTGGATTTCGGCCGCACCCCTCTGCCTCCTCTG i nomLeu3.chr11 T 60 C 0 s rheMac3.chr2 103607091 33 + 192599291 CTGGATTTCAGCCACACCTCTCTACCTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246557 33 - 192460366 CTGGATTTCAGTCACACCTCTCTACCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042840 8 + 187378091 ctg-------------------tacct------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909564 33 + 91754291 CTGGATTTCAGCCACACCTCTCTACCTCCTCTG i chlSab2.chr15 C 0 T 60 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=64403.000000 s hg38.chr3_KI270781v1_alt 30586 30 + 113034 GATTTCAGCCACACCTCTCTACCTCCTCTG s panTro4.chr3 13780946 30 - 202329955 GATTTCAGCCACACCTCTCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762616 30 - 202140232 GATTTCGGCCACACCCCTCTGCCTCCTCGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319955 30 - 123690457 GATTTCATCCACACCTCTCTACCTCCTCTG i nomLeu3.chr11 C 0 T 30 s rheMac3.chr2 103607124 30 + 192599291 GATTTCAGCCACACCTCTCTGCCTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246590 30 - 192460366 GATTTCAGCCACACATCTCTACCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042848 22 + 187378091 --------acacacctctctacctcctctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909537 30 + 91754291 GATTTCAGCCACACCTCTCTGCCTCCTCTG i chlSab2.chr15 T 60 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=63124.000000 s hg38.chr3_KI270781v1_alt 30616 30 + 113034 GATTTCATCCACGCCTCTCTA---------------------------CCTCCTCTG s panTro4.chr3 13780976 30 - 202329955 GATTTCAGCCACACCTCTCTA---------------------------CATCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762646 30 - 202140232 GATTTCATCCACACCCCTCTG---------------------------CCTCCTCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319955 30 - 123690457 GATTTCATCCACACCTCTCTA---------------------------CCTCCTCTG i nomLeu3.chr11 T 30 T 60 s rheMac3.chr2 103607154 30 + 192599291 GATTTCAGCCACACCTCTCTA---------------------------CCTCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246620 57 - 192460366 GATTTCAGTCACACCTCTCTACCTCCTCTGTACCTACACACCTCTCTGCCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042870 30 + 187378091 gatttcagtcacacctctcta---------------------------cctcctctG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909567 30 + 91754291 GATTTCAGCCACACCTCTCTA---------------------------CCTCCTCTG i chlSab2.chr15 C 0 T 90 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=47737.000000 s hg38.chr3_KI270781v1_alt 30646 30 + 113034 GATTTCAGCCACACCCCTCTGTCTCCTCTG s panTro4.chr3 13781006 30 - 202329955 GATTTCAGCCACACCCCTCTGTCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762676 30 - 202140232 GATTTCAGCCACACCTCTCTACCTCCTCTG i ponAbe2.chr3 C 0 T 43 s nomLeu3.chr11 14319925 30 - 123690457 GATTTCGGCCGCACCCCTCTGCCTCCTCTG i nomLeu3.chr11 T 60 C 0 s rheMac3.chr2 103607184 30 + 192599291 GATTTCAGTCAGACCTCTCTACCGCCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246677 30 - 192460366 GATTTCAGCCACACCTCTCTACCTCCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042900 30 + 187378091 GATTTCAGTCAGACCTCTCTACGGCCTCTG i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4909597 90 + 91754291 T e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=19892.000000 s hg38.chr3_KI270781v1_alt 30676 17 + 113034 GATTTCAGCC------------------------------ACACCTA s panTro4.chr3 13781036 17 - 202329955 GATTTCGGCC------------------------------ACACCCA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14319955 17 - 123690457 GATTTCATCC------------------------------ACACCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103607214 17 + 192599291 GATTTCAGTC------------------------------ACACCTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246707 47 - 192460366 GATTTCAGTCAGACCTCTCTACCGCCTCTGGATTTCAGTTACACCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042930 17 + 187378091 GATTTCAGTC------------------------------ACACCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909507 17 + 91754291 GATTTCAGCC------------------------------ACACCTC i chlSab2.chr15 T 90 C 0 e ponAbe2.chr3 13762706 43 - 202140232 T e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=8704.000000 s hg38.chr3_KI270781v1_alt 30693 4 + 113034 TCTA s panTro4.chr3 13781053 4 - 202329955 TCTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762663 4 - 202140232 TCTG i ponAbe2.chr3 T 43 C 0 s nomLeu3.chr11 14319972 4 - 123690457 TCTA i nomLeu3.chr11 C 0 T 30 s rheMac3.chr2 103607231 4 + 192599291 TCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246754 4 - 192460366 TCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042947 4 + 187378091 TCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909524 4 + 91754291 TCTG i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=38831.000000 s hg38.chr3_KI270781v1_alt 30697 16 + 113034 CCTCCTCTGGATTTCA s panTro4.chr3 13781057 16 - 202329955 CCTCCTCTGGATTTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762667 16 - 202140232 CCTCCTCTGGATTTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319946 16 - 123690457 CCTCCTCTGGATTTCA i nomLeu3.chr11 T 30 C 0 s rheMac3.chr2 103607235 16 + 192599291 TCTCCTCTGGATTTCG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246758 16 - 192460366 TCTCCTCTGGATTTCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042951 16 + 187378091 TCTCCTCTGGATTTCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909528 16 + 91754291 TCTCCTCTGGATTTCA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92388677 0 - 98464013 C a score=61954.000000 s hg38.chr3_KI270781v1_alt 30713 23 + 113034 GCCACACCTC------TCTACCTCCTCTG s panTro4.chr3 13781073 23 - 202329955 GCCACACTTC------TCTACCTCCTCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762683 23 - 202140232 GCCACACCTC------TCTACCTCCTCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319962 23 - 123690457 TCCACACCTC------TCTACCTCCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103607251 23 + 192599291 GCCACACCTC------TTTACCACCTCTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103246774 23 - 192460366 GCCACACCTC------TTTACCACCTCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101042967 23 + 187378091 GCCACACCTC------TTTACCACCTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909544 23 + 91754291 GCCACACCTC------TCTGCCTCCTCTG i chlSab2.chr15 C 0 I 425 s calJac3.chr15 92388677 29 - 98464013 TCTACACCTCTTCCTTTCTACCTCCCCTG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I a score=883489.000000 s hg38.chr3_KI270781v1_alt 30736 394 + 113034 TAGCAGCAATTCTATGTCTCTGTGTTAATGAAAAGTCCTTGCCGCAGCCAGTggagaagagagagagaagggcagagagagtatttaaggaaatagctgaaaacattccaaatttgatgaaagacatgaacataaatatctaagaagttcaacaagtaggatgaacttagagatctacattaaggtacatcatcattaaaccatcaaaagacaaagacaaagagcgactcttgaaagcagcaagagggaagccacttgtcatatacaagggatcctcaataagattactagcagatttctcatcagaaagtttggagaccggaaggcagggggctgatatattcaaagtgctaaaagaaaaaggaaagcctgtcaaccaagaatgctacagccC s panTro4.chr3 13781096 390 - 202329955 TAGCAGCAATTCTATGTCTCTGTGTTAATGAAAAGTCCTTGCCACAGCCAGTggaga----agagagaagggcagagagagtatttaaggaaatagctgaaaacatcccaaatttgatgaaagacatgaacataaatatctaagaagttcaacaagtaggatgaacttagagatctacattaaggtacatcatcattaaaccatcaaaagacaaagacaaagagcgactcttgaaagcagcaagagagaaaccacttgtcatatacaagggatcctcaataagattactagcagatttctcatcagaaagtttggagaccggaaggcagggggctgatatattcaaagtgctaaaagaaaaaagaaagcctgtcaaccaagaatcctacagccC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13762706 394 - 202140232 TAGCAGCAATTCTATGTTTCTGTGTTAATGAAAAGCACTTGCCGCAGCCAGTggagaagagagagagaagggcagagagagtatttaaggaaatagctgaaaacatcccaaatttgatgaacgacatgaacataaatatctaagaagttcaacaagtaggatgaactcagagatctacattaaggtacattttcattaaaccatcaaaagacaaagacaaagagcgacttttgaaagcagcaagagagaagccacttgtcatatacaagggatcctcaataagattactagcagatttctcatcagaaactttggagaccagaaggcagggggctgatatattcaaagtgccaaaagaaaaaagaaagcctgtcaaccaagaatcctacagccC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14319985 394 - 123690457 TAGCAGCAATTCTATGTCTCTGTGTTAATGAAAAGCACTTGCTGCAGCCAGTggagaagagagagagacaggcagagagagtatttaaggaaatagctgaaaacatcccaaatttgatgaaagacatgaacataaatatcaaagaagttcaacaagtaggatgaactcagagatctacactaaggtacattatcatcaaaccatcaaaagacaaagacaaagagcgactcttgaaagcagcaagagagaagccacttgtcatatacaagggattctcaataagattactagcagatttctcatcagaaactttggagaccagaaggcagggggctgatatattcaaagtgctaaaagaaaaaagaaagcctgtcaaccaagaacactacaaccC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103607274 391 + 192599291 TAGCAGCAATTCTATGTCTCTGTGTCAATGAAAACCACTTGCCGCAGCCAGT---gaagagagagagaagggcagagagagtgtttaaagaaatagctgaaaacatcccaaatttgataatagacatgaatataaatatccaagaagttcaacaagtaggatgaactcagagatccacgttaaagtacattataatcaaaccatcaaaagccaaagtcaaagtgagactcttgaaagcagcaagagaaaagcactttgtcatatacaagggatcctcaataagattactagcagatttatcatcagaaactttggagaccagaaggcagggggctgatatattcaaagttctaaaagaaaaaagaaaacttgtcaaccaagaatcctacggccc i rheMac3.chr2 C 0 I 1 s macFas5.chr2 103246797 391 - 192460366 TAGCAGCAATTCTATGTCTCTGTGTCAATGAAAACCACTTGCCGCAGCCAGT---gaagagagagagaagggcagagagagtgtttaaagaaatagctgaaaacatcccaaatttgataatagacatgaatataaatatccaagaagttcaacaagtaggatgaactcagagatccacgttaaagtacattataatcaaaccatcaaaagccaaagtcaaagtgagactcttgaaagcagcaagagaaaagcactttgtcatatacaagggatcctcaataagattactagcagatttatcatcagaaactttggagaccagaaggcagggggctgatatattcaaagttctaaaagaaaaaagaaaacttgtcaaccaagaatcctacggcct i macFas5.chr2 C 0 I 1 s papAnu2.chr2 101042990 394 + 187378091 TAGCAGCAATTCTATGTCTCTGTGTCAATGAAAACCACTTGCCGCAGCcagtggagaagagagagagaagggcagagagagTGTTTAAAGAAATAGCTGAAAACATCCCAGATTTGATAATAGACATGAATATAAATATCCAAGAAGTTCAACAAGTAGGATGAACTCAGAGATCCACGTTAAGGTACATTATAATCAAACCATCAAAAGCCAAAGTCAAAGTGAGactcttgaaagcagcaagagaaaagcactTTGTCATATACAAGGGATCTTCAATAAGATTACTAGCAGATTTATCATCAGAAACTTTGGAGACCAGAAGGCAGGGGACTGATATATTCaaagttctaaaagaaaaaagaaaacttgccaACCAAGAATCCTACGGCCC i papAnu2.chr2 C 0 I 1 s calJac3.chr15 92388706 370 - 98464013 TAGCAGCAATTCTATGTCTCTGTGTTAATGAAAACCACTTGCCATAGCCAGTggagaagagagagagaagggcagagagagtatttaaagaaatagctgaaaacatcccaaatttgatgaaagacatgaatataaatatccaagaagttcaacaagtaggatgaactcagagatccacattaaggtatattataatcaaatcaacaaaagacaaagacaaagagagactctttaaagtagcaagagagaagcaacttgtcatattcaagggatcctcaataagattactagcagatttctcatc---cactttgaata-----------------gatatattcaaagtgctaaaagaaaaaag----cctgccaaccaagaatcctacagccc i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4909567 425 + 91754291 I e canFam3.chr34 24768137 914 - 42124431 I a score=3998.000000 s hg38.chr3_KI270781v1_alt 31130 4 + 113034 -CCAA s panTro4.chr3 13781486 4 - 202329955 -CCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763100 4 - 202140232 -CCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14320379 4 - 123690457 -CCGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103607666 4 + 192599291 -caaa i rheMac3.chr2 I 1 C 0 s macFas5.chr2 103247189 4 - 192460366 -caaa i macFas5.chr2 I 1 C 0 s papAnu2.chr2 101043385 4 + 187378091 -CAAA i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 4909992 4 + 91754291 -caaa i chlSab2.chr15 I 425 C 0 s calJac3.chr15 92389076 4 - 98464013 acaa- i calJac3.chr15 C 0 I 4565 e canFam3.chr34 24768137 914 - 42124431 I a score=979433.000000 s hg38.chr3_KI270781v1_alt 31134 445 + 113034 TTTTTTTGCCTTTcatgtttatgaggcatctatagttcccttggcacgaatagccactttctgtcctttgtccatttttctcctgaggtgtttatttattttttattttttattattttttaaatggagtcttgctctgtcacctaggctgtagtgcagtggcatgatctcagctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagataataggcacgcaccaccatgcctggctaatttttgtatttttagtagagacaagatttgaccatgttggccatgctagtctcgaatacctgacctagcggtctgccctccttggcctcccaaagtgctggtgttacaggtgtgagccacggcacctggccatatttttaac-ttttttctttgtaagtgctttctatgttgtaagg s panTro4.chr3 13781490 445 - 202329955 TTTTTTTGcctttcgtgtttatgaggcatctatagttcccttggcacgaatagccactttctgtcctttgtccatttttctcctgaggtgtttatttattttttattttttatttttttttaaatggagtcttgctctgtcacctaggctgtagtgcagtggcatgatctcagctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgagataataggcacacaccaccatgcctggctaatttttgtatttttagtagagacaagatttgaccatgttggccatgctagtctcgaatgcctgacctagcgatctgccctccttggcctcccaaagtgctggtgttacaggtgtgagccacggcacctggccatatttttaac-ttttttctttgtaagtgctttctatgttgtaaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763104 445 - 202140232 TTTTTTTGACTTTcatgtttatgaggcatctatagttcccttggcacgaatagccactttctgtcctttgtccatttttctcctgaggtgtttatttattttttattttctatttttttttaaatggagtctagctctgtcacctaggctagagtgcagtggcatgatctcagctcactgcaacctctgcctcttgggttcaagcaattctcctgcctcagcctcccaagtagctgggataataggcacacaccaccatgcctggctaatttttctatttttgatagagacaagatttcaccatgttggccatgctggtctcgaatgcctgacctagcaatctgccctccttggcctcccaaagtgctggtgttacaagtgtgagccacggcgcctggccatatttttaac-ttttttctttgtaagtgctttctatgttgtaagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14320383 437 - 123690457 TTTCTTTGACTTTcatgtttatgaggcatctatagttcccttggcacgaatagccactttctgtcctttgtccatttttctcttgaggtgtttatttatttttt--------tatttttttaagtggagtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcaccgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctctcaagtagctaggataataggcacgcatcaccatgcctggctaatttttgtatttttagtagagacaagatttcaccatgttggccatgctggtctctaatgcctgacctagcgatctgccctccttggcctcccaaagtgctggtgttacaggtgtgagccacagcgcctggccatatttttaac-ttttttctttgtaagtgctttctgtgttttaagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103607670 440 + 192599291 attgtTTGACTTTtatgtttatgagccatctatagttcccttggtgtgaatagccactttctgtcctttgtccatttttctcttgaggtgtttatttatttattat------ttttttctgagacagagtcttgctctgtcacccgggctggagtgtaggagtgcaatctctgctcattgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttagtaaagatggggtttccctgttttggccatgctggtctcgaatgcctgatctcttaatgtgcccacctcggcctcccaaagtgctggggttactggtgtgagccatggcgtctggccatatttttaactttttttctttgtaagtgctttctatgttgtaagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247193 440 - 192460366 attgtTTGACTTTTatgtttatgagccatctatagttcccttggtgtgaatagccactttctgtcctttgtccatttttctcttgaggtgtttatttatttattat------ttttttctgagacagagtcttgctctgtcacccgggctggagtgcaggagtgcaatctctgctcattgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttagtaaagatggggtttccctgttttggccatgctggtctcgaatgcctgatctcttaatgtgcccacctcggcctcccaaagtgctggggttactggtgtgagccatggcgtctggccatatttttaactttttttctttgtaagtgctttctatgttgtaagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101043389 439 + 187378091 ATTGTTTGACTTTTATGTTTATGAGCCATCTATAGTTCCCTTGGTGTGAATAGCCACtttctgtcctttgtccatttttctcttgaggtgtttatttatttattat------ttttttctgagacagagtcttgctctgtcacccaggctggagtgcaggggtgcaatctccgctcattgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttagtaaagatggggtttccctgttttggccatgctggtctcgaacgcctgatcTCTTaatgtgcccaccttggcctcccaaagtgctggggttacaggtgtgagccatggcgtcTGGccatatttttgac-ttttttctttgtaagtgcTTTCTATGTTGTAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4909996 440 + 91754291 attgtTTGACTTTtatgtttatgagccatctatagttcccttggtgtgaatagccactttctgtcctttgtccatttttctcttgaggtgtttatttatttattta------ttttttctgagacagagtcttgctctgtcacccaggctggagtgcaggggtgcaatctctgctcattgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttagtaaagatggggtttccctgttttggccatgctggtctcaaatgcctgatctcttaatgtgcccacctcggcctcccaaagtgctggggttacaggtgtgagccatgacgtctggccacattttaaactttttttctttttaagtgctttctatgatgtaagg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24768137 914 - 42124431 I e calJac3.chr15 92389080 4565 - 98464013 I a score=240075.000000 s hg38.chr3_KI270781v1_alt 31579 81 + 113034 agactaaCACTTTCTTACATATGGGGCACAATTTTATTTTGTTTTTCTTTTGAaaattttaaactgtaattttaatcagta s panTro4.chr3 13781935 81 - 202329955 agactaacactttcttacatatggggcacaattttattttgtttttcttttgaaaattttaaactgtaattttaatcagta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763549 81 - 202140232 agactaaCACTTTCTTACATATGGGGCACaattttattttgtttttcttttgaaaattttaaactgtaattttaataaata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14320820 81 - 123690457 agactaaCACTTTTTTACATATGGGGCACAATTTTATTTTGTTTTTCTTTTGAAAAATTTAAACTGTAATTTTAATAAATA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103608110 81 + 192599291 agactGACACTTTCTTACATATGGGGCGCACTTTTAGTTTGTTTTTCTTTTGAAATTTTTAAACTGtaattttaataaata i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247633 81 - 192460366 aGACTGACACTTTCTTACATATGGGGCGCACTTTTAGTTTGtttttcttttgaaatttttaaactgtaattttaataaata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101043828 81 + 187378091 AGACTGACACTTTCTTACATATGGGGCAcacttttagtttgtttttcttttgaaatttttaaactgtaattttaataaata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4910436 81 + 91754291 aGACTGACACTTTCTTACATATGGGGCACACTTTTAGTTTGTTTTTCTTTTGAAATTTTTAAACTGTAATTTTAATAAATA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92393645 81 - 98464013 AGATTAACACTTTCTTATATGTAGGGCACAATTTTAGCCTGTTTCTCTTTTGAAATTTTTAAACTGtaattttaataaata i calJac3.chr15 I 4565 C 0 e canFam3.chr34 24768137 914 - 42124431 I a score=490179.000000 s hg38.chr3_KI270781v1_alt 31660 153 + 113034 c---atgtttaatttttattaataaataactt---acaattttt-aatATAATTAAATATGTTACTGTTTTTCTTTATGACTCTTGCTTTGGTATCATTCAAAGAAATACTTTAAAAACTTCAGGATCATAGAAATTTAGCAAGGACTGCTAGTAATAAC s panTro4.chr3 13782016 153 - 202329955 c---atgtttaatttttattaataaataactt---acaattttt-aatataattaaatatgttactgtttttctttatgactcttgctttggtatcattcaaagaaatactttaaaaacttcaggatcatagaaatTTAGCAAGGACTGCTAGTAATAAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763630 153 - 202140232 c---atgtttaatttttattaataaataactt---aaaaatttt-aatataattaaatatGTCATTGTTTTTCTTTATGACTCTTGCTTTGGTATCGTTCAAAGAAATACTTTAAAAACTTCAGGATCATAGAAATTTGGCAAAGACTGCTAGTAATAAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14320901 153 - 123690457 C---ATGTTTAATTTTTATTAATAAATAATTT---AAATTTTTT-TATATAATTAAATATGTTACTGTTTTTCTTTATGACTCTTGCTTTGGTATCGTTCAACGAACTACTTAAAAAACTTCAGGATCATAGAAATTTAGCAAGGACTGCTAGTAATAAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103608191 156 + 192599291 cataatgtttaatttttattaaaaaaacactt---aaaatgttt-aatgtaattaaatatGTTACTGTTTTTCTTTATGACTCTTGCTTTGGTGTCATTCAAAGAAATACTTAAACAACTTCAGGATCATAGACATTTAGCAAGGACTGCTAGTAATAAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247714 156 - 192460366 cataatgtttaatttttaTTAAAAAACCACTT---AAAATGTTT-AATGTAATTAAATATGTTACTGTTTTTCTTTATGACTCTTGCTTTGGTGTCATTCAAAGAAATACTTAAACAACTTCAGGATCATAGACATTTAGCAAGGACTGCTAGTAATAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101043909 156 + 187378091 cataatgtttaatttttattaaaaaaccactt---aaatttttt-aatgtaattaaatatgttactgtttttctttatgaCTCTTGCTTTGGTGTCATTCAAAGAAATACTTAAACAACTTCAGGATCATAGAAATTTAGCAAGGACGGCTAGTAATAAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4910517 156 + 91754291 CATAATGTTTAATTTTTATTAAAAAACCACTT---AAATTTTTT-AATGTAATTAAATATGTTACTGTTTTTCTTTATGACTCTTGCTTTGGTGTCATTCAAAGAAATACTTAAACAACTTCAGGATCATAGAAATTTAGCAAGGACTGCTAGTAACAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92393726 153 - 98464013 cacaatgtttaatttttattcataaacaactt---aaaatttttaaatataattaaatatGTTACTGTTTTTCGTTATGACTCTTGTTTTGGTAACATTCAAAGAAATACTT----AACTTCAGGATCATAGAAATTCAGCAAGGACTGATAGTAATAAC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24769051 153 - 42124431 ---catgtttaatttctattactaaaaacatttaaaaaatttta-aatataattaaa---atcttcattttttttaaCAGGTCCTGCTTTGGTATTACTCATAGGACTACTTGAACAACTTCAGCATCATAGGAATTCAGCCAGGAATGTTAGAAACAAC i canFam3.chr34 I 914 C 0 a score=23580.000000 s hg38.chr3_KI270781v1_alt 31813 7 + 113034 AATAGGA s panTro4.chr3 13782169 7 - 202329955 AATAGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763783 7 - 202140232 AATAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321054 7 - 123690457 AATAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103608347 7 + 192599291 AATAGGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247870 7 - 192460366 AATAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101044065 7 + 187378091 AATAGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4910673 7 + 91754291 AATAGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92393879 7 - 98464013 AATAGGA i calJac3.chr15 C 0 C 0 e canFam3.chr34 24769204 0 - 42124431 C a score=2476.000000 s hg38.chr3_KI270781v1_alt 31820 3 + 113034 Ggg s panTro4.chr3 13782176 3 - 202329955 Ggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763790 3 - 202140232 Ggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321061 3 - 123690457 Ggg i nomLeu3.chr11 C 0 C 0 s calJac3.chr15 92393886 3 - 98464013 AGG i calJac3.chr15 C 0 C 0 e chlSab2.chr15 4910680 0 + 91754291 C e papAnu2.chr2 101044072 0 + 187378091 C e macFas5.chr2 103247877 0 - 192460366 C e rheMac3.chr2 103608354 0 + 192599291 C e canFam3.chr34 24769204 0 - 42124431 C a score=137963.000000 s hg38.chr3_KI270781v1_alt 31823 292 + 113034 ccgggcgcagtggctcacgcctgtaatcccaacactttgggaggccgaggtggggggatcaagaggtcaggaggtcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaattagctgggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccaagaagcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggtgacagagccagactccatctcaaaaaaaaaaaaaa s panTro4.chr3 13782179 289 - 202329955 ccgggtgcagtggctcacgcctgtaatcccaacactttgggaggccgaggtggggggatcaagaggtcaggaggtcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaattagctgggcacggtggcgggcgtctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccaagaagcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggtgacagagccagactccatctc---aaaaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13763793 282 - 202140232 ccgggtgcggtggctcacgccagtaatcgcagcactttgggaggccgaggcgggcagatcaagaggtcaggagatggagaccatcctggctaacaccatgaaaccccgtttctactaaaaatacaaaaattagctcggcgcggtggcaggcatctgtagtcccagctactcgggaagctgaggcaggataatggcgtgaacccaagaagcggagcttgcggtgagctgagatcaaaccactgcactccagcctgggcgacagagccagactccatctc----------aaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321064 279 - 123690457 ccaggtgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcaagaggtcaggagatcgagac------------cacagtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcaggcgtctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgagaagtggagcttgcagtgagccgagatcgtgacactgcactccagcctgggtgacagagccagactccatctc-aaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4910680 0 + 91754291 C e papAnu2.chr2 101044072 0 + 187378091 C e macFas5.chr2 103247877 0 - 192460366 C e rheMac3.chr2 103608354 0 + 192599291 C e canFam3.chr34 24769204 0 - 42124431 C e calJac3.chr15 92393889 0 - 98464013 C a score=1196.000000 s hg38.chr3_KI270781v1_alt 32115 6 + 113034 aaaGCT s panTro4.chr3 13782468 6 - 202329955 aTAGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13764075 6 - 202140232 aGGGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321343 6 - 123690457 aaaGGT i nomLeu3.chr11 C 0 C 0 s canFam3.chr34 24769204 6 - 42124431 ATAGTA i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4910680 0 + 91754291 C e papAnu2.chr2 101044072 0 + 187378091 C e macFas5.chr2 103247877 0 - 192460366 C e rheMac3.chr2 103608354 0 + 192599291 C e calJac3.chr15 92393889 0 - 98464013 C a score=9828.000000 s hg38.chr3_KI270781v1_alt 32121 3 + 113034 AAA s panTro4.chr3 13782474 3 - 202329955 AAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13764081 3 - 202140232 AAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321349 3 - 123690457 AAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103608354 3 + 192599291 AAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247877 3 - 192460366 AAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101044072 3 + 187378091 AAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4910680 3 + 91754291 AAA i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24769210 3 - 42124431 AAA i canFam3.chr34 C 0 C 0 e calJac3.chr15 92393889 0 - 98464013 C a score=3087375.000000 s hg38.chr3_KI270781v1_alt 32124 983 + 113034 TTATTCataatcacc----------atcat----tattcactatgta--tcagacactttata--tataatcccatttaattctcataacaaatctatgaagtaattattattcccattctacacatcaggaagctgagactcaagaagaccaagtaaattccccacagtcaT---GATTACGGG-GTTGGAAGTGAATGTCAGTAGTTTtgctgtgcataaacttcaggctttgttg---gatgagcagacccgggtccacgtcctggctctgctgtgccagctggcagatggaccactttgtgcatgtctctgcaccgctctggaccttcatttcacttgtaaaatttcacctaataacacctccctcatagagttgtt---------aaatga--gagaaaagtatgtactgtgccaagcacTGAGAGAAAAGTCAGCCTGA--GAGTCAGCCCTACTCCTCTTTGCTGGAGCTCCTTCACTCTCTTTGTTTCCTCTCTGCAGGGGTAGGGCGCTGTGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGACATCTGCAGTGAGGTGCACAGATTGAAATGCTGGGCCTAGCCGATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCGGTCCCACCCTGGAGG-ACCCTCTTAAAGGCGTCCCACCCTGGGGTGTGGCTCAGGTTTCTGCAACA-AGACCTATTCCTTTCTGTGTGTGGGAGGCAGGGGTGGGGCTCG-TCAGCATGATCTCTCCGTGGTTCAGAGGCAGCCACTCCTGCCTGTGAGGATGCCGGTCATGTGTGTGTGAGGTTGCTGCTC----ATCTACCAGCTCTCGCCCCGTTGGCCCCAACACACACACTAAAGCCATGGGCACCCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTTCTCTACTCACTCTACTATATGGTGCTGGTGTCTCTGGCCCTGCTA-CAGGAACAGAGGCTCCTCAAACTCCCTCTGCCCTCCAGGGAGAAGTGAG s panTro4.chr3 13782477 983 - 202329955 TTATTCataatcacc----------atcat----tattcactatgta--tcagacactttata--tataatcccatttaattctcataacaaatctatgaagtaattattattcccattctacacatcaggaagctgagactcaagaagacgaagtaaattccccacagtcaT---GATTATGGG-GTTGGAAGTGAATGTCAGTAGTTTtgctgtgcataaacttcaggctttgttg---gatgagcagacccgggtccacgtcctggctctgctgtgccagctggcagatggaccactttgtgcatgtctctgcaccgctctggaccttcatttcacttgtaaaatttcacctaataacacctccctcatagagttgct---------aaatga--gagaaaagtatgtactgtgccaagcactgagagaaaagtcagcctga--gagtcagccctACTCCTCTTTGCTGGAGCTCCTTCACTCTCTTTGTTTCCTCTCTGCAGGGGTAGGGCGCTGTGGCAGAGGGGCTGGTGAAAGAAATGCTGAATCAGCATCTGTGAAACTGACATCTGCAGTGAGGTGCACAGATTGAAATGCTGGGCCTAGCCGATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCGGTCCCACCCTGGAGG-ACCCTCTTAAAGGCGTCCCACCCTGGGGTGTGGCTCAGGTTTCTGCAACA-AGACCTATTCCTTTCTGTGTGTGGGAGGCAGGGGTGGGGCTCG-TCAGCATGATCTCTCCGTGGTTCAGAGGCAGCCACTCCTGCCTGTGAGGATGCCGGTCATGTGTGTGTGAGGTTGCTGCTC----ATCTACCAGCTCTCGCCCCGTTGGCCCCAACACACACACTAAAGCCATGGGCACCCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTTCTCTACTCACTCTACTATATGGTGCTGGTGTCTCTGGCCCTGCTA-CAGGAACGGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13764084 992 - 202140232 TTATTCataatcacc----------atcat----tattcactatgta--tcagacactttata--tataatcccatttaattctcataacaaatctatggagtaattattattcccattctacagatcaggaagccgagactcaagaagacgaagtaaattcctcacagtcaT---GATTACGGG-GTTGGAAGTGAATGTCAGTGGTTTTGCTGTGCATAAACTTCAAGCTTTGttg---gagaagcagacccgggtccacgtcctggctctgctgtgccagctggcagatggaccactttgtgcatgtctctgcactgctctgaaccttcatttcacctgtaaaatttcacctaataacacctccctcatagcgttgttgaggaattcaaatga--gagaaaagtatgtaCTGTGCCAATCACCGAGAGAAAAGTCAGCCTGA--GAGTCAGCCCTGCTCCTCTTTGCTGGAGCTCCTTCACTCTTTTTGTCTCCTCTCTGTAGGGGTAGGGTTCTGTGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGACGTCTGCAGTGAGGTGCAGAGAGTGAAATGCTGGGCCTAGCTGATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCAGTCCCACCCTGGGGG-ACCCTCTTAAAGGCGTCCCACCCTGGGGCGTGGCTCAGGTTTCTGCAACA-AGACCTATTCCTTTCTGTGTGTGGGAGGCAGGGGTGGGGCTCG-TCAGCGTGCTCTCTCCACGGTTCAGAGGCAGCCACTCCTGCCTGTGAGGATGCTGGTCATGTGTGTGTGAGGTTGCTGCTC----ATCTACCAGCTCTCGCCCTGTTTGCCCCGACACACACACTAAACCCATGGGCACCCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTCCTCTACTCACTCTACTATTCGGTGCTGGTGTCTCTGGCCCTGCTA-CAGGAACAGAGGCTCCTCAAACTCCCTCTGCACCCCAGGGAGAAGTGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14321352 992 - 123690457 TTATTCataatcacc----------atcat----tattcactatgta--tcagacgctttatg--tataatcccatttaattctcataacaaatctatgaagtaattattattcccattctatagatcaggaagccgagactcaagaagacgaagtaaattccccacagtcaT---GATTACGGG-GTTGGAAGTGAATGTCAGTAGTTTtgctgtgcataaacttcaggctttgttg---aatgagcagagccaggtctacgtcctggctctgctgtgccagctggcagatggaccactttgtgcatgtctctgtactgctctgaaccttcatttcacctgtaaaatttcacctaataacacctccctcatagagttgttgaggaattcaaatga--gagaaaagtatgtactgtgccaagcacagAGAGAAAAGTCAGCCTGA--GACTCAGCCCTACTCCTCTTTGCTGGAGCTCCTTCACTCTCTGTGTCTCCTCTCTGTAGGGGTAGGGCACTGTGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAAATGACATCTGCAGTGAGGTGCAGAGATTGAAATGCTGGGCCTAGCGGATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGGGGTCCCACCCTGGGGG-ACCCTCTTAAAGGCATCCCACCCTGGGGCGTGGCTCAGGTTTCTGCAACA-AGACCTATTCCTTTCTGTGTGTGGGAGGCAGGGGTGGGGCTCG-TCAGCATGATCTCTCCCCGGTTCAGAGGCAGCCACTCCTGCCTGTGAGGATGCTGGTCATGTGTGTGTGAGGTTGCTGCTC----ATCTACCAGCTCTCGCCCTGTTGGCCCCGACACACACACTAAAGCCATGGGCACCCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTCCTCTACTCACTCTACTATTCGGTGCTGGTGTCTCTGGCCCTGCTA-CAGGAACAGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103608357 990 + 192599291 TTATTCataatcacc----------atcat----tgttcactatgta--tcagacactttatatttattattccatttaattctcgtaacaaatctatgaagtaattgttattcccattctacagatcaggaagccgagactcaagaagatgaagtaaattccccacagtcaT---GATTATGGG-GTTGGAGGTGAATGTCAGTAGTTT-----TGCATAAACTTcaggctttgtcg---gatgagcagacccgggtccacgtcctggctctgcagtgccagctggcagatgcaccactttgtgcatgtccccacactgctctgaaccttcatttcacctgtaaaatttcacctaataacacct-cctcatagagttgttgaggaattcaaatga--gagaaaagtaggtactgtgtcaagcaccgagagaaaagtcagcctgacagagtcagcCCCATTCCTCTTTGCTGGAGCTCCTTCACTCTCTTCGTCTCCTCTCTGTAAGGGTAGGGTGCTGCGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGATGTCCGCAGTGAGGTGCAGAGATTGAAATGCTGGGCCTAGCCAATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCGGTCCCACCCTGGGGG-GCCCTCTTAAAGCGGTCCCACCCTGGGGCATGGCTCAGGTGTCTGCAACG-AGACCTATCCCTTTCTGTGTGTGGTAGGCAGGGGTAGGGCTCA-ACAGCATGATCTCTCTGTGGTTCAGAGGCGGCCACTCCCGCCTGTGAGGATGCTGGTCGTGTGCGTGTGAGGTTGCTGCTT----ATCTGCCAGCCTTCGCCCTGTTGGCCCCGACACACACACTAAAGCCATGGGCACTCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTCCTCTACTCATTCTACTATTTGGTGCTGGTGTCTCTGGCCCTGCTA-TGGAAACAGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTTAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103247880 990 - 192460366 TTATTCataatcacc----------atcat----tgttcactatgta--tcagacactttatatttattattccatttaattctcgtaacaaatctatgaagtaattgttattcccattctacagatcaggaagccgagactcaagaagatgaagtaaattccccacagtcaT---GATTATGGG-GTTGGAGGTGAATGTCAGTAGTTT-----TGCATAAACTTcaggctttgtcg---gatgagcagacccgggtccacgtcctggctctgcagtgccagctggcagatgcaccactttgtgcatgtccccacactgctctgaaccttcatttcacctgtaaaatttcacctaataacacct-cctcatagagttgttgaggaattcaaatga--gagaaaagtaggtactgtgtcaagcaccgagagaaaagtcagcctgacagagtcagcCCCATTCCTCTTTGCTGGAGCTCCTTCACTCTCTTCGTCTCCTCTCTGTAAGGGTAGGGTGCTGCGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGATGTCCGCAGTGAGGTGCAGAGATTGAAATGCTGGGCCTAGCCAATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCGGTCCCACCCTGGGGG-GCCCTCTTAAAGCGGTCCCACCCTGGGGCATGGCTCAGGTGTCTGCAACG-AGACCTATCCCTTTCTGTGTGTGGTAGGCAGGGGTAGGGCTCA-ACAGCATGATCTCTCTGTGGTTCAGAGGCGGCCACTCCCGCCTGTGAGGATGCTGGTCGTGTGCGTGTGAGGTTGCTGCTT----ATCTGCCAGCCTTCGCCCTGTTGGCCCCGACACACACACTAAAGCCATGGGCACTCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTCCTCTACTCATTCTACTATTTGGTGCTGGTGTCTCTGGCCCTGCTA-TGGAAACAGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101044075 981 + 187378091 TTATTCATAATCACC----------ATCAT----TATTCACTATGTA--TCAGacactttatatttattattccatttaattctcGTAACAAATCTATGAAGTAATTGttattcccattctacagatCAGGAAGCCGAGACTCAAGAAGATGAAGTAAATTCCCCACAGTCAT---GATTATGGG-GTTGGAGGTGAATGTCAGTAGTTC-----TGCATAAACTTCAGGCTTTGTCG---GATGAGCAGACCCGGGTCCATGTCCTGGCTCTGCAGTGCCAACTGGCAGATGCACCACTTTGTGCATGTCCCCGCACTGCTCTGAACCTTCATTTCACCTGTAAAATTTCACCTAATAACACCT-CCTCATAGAGTTGTTGAGGAATTCAAATGA--GAGAAAAGTAGGTACTGTGTCAAGCACCGAGAGAAAAGTCAGCCTGACAGAGTCAGCCCCATTCCTCTTTGCTGGAGCTCCTTCACTCTCTTCGTCTCCTCTCTGTAGGGGTAGGGTGCTGCGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGATGTCCACAGTGAGGTGCCGAGATTGAAATGCTGGGCCTAGCCAATTTAAGTAAGGAGCAGAGCAAGGTGGCTGC----------CCCTGGGGGAACCCTCTTAAAGCGGTCCCACCCTGGGGCATGGCTCAGGTGTCTGCAACG-AGACTTATCCCTTTCTGTGTGTGGGAGGCAGGGGTAGGGCTCA-ACAGCATGATCTCTCTGTGGTTCAGAGGCGGCCACTCCCGCCTGTGAGGATGCTGGTTGTGTGCGTGTGAGGTTGCTGCTT----ATCTGCCAGCCTTCGCCCTGTTGGCCCCGACACACACACTAAAGCCATGGGCACTCTCGAGGGACACCTGCTGCCAGCAATGTTCTTCCTTCTCTACTCATTCTACTATTTGGGGCTGGTGTCTCTGGCCCTGCTA-TGGAAACAGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTTAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4910683 989 + 91754291 TTATTCataatcacc----------atcat----tattcactatgta--tcagacactttatatttattattccatttaattctcgtaacaaatctatgaagtaattgttattcccattctacagatcaggaagccgagactcaagaagatgaagtaaattccccacagtcaT---GATTATGGG-GTTGGAGGTGAATGTCAGTAGTTT-----TGCATAAACTTCAGACTTTGTTG---GATGAgcagacccgggtccacgtcctggctctgcagtgccagctgccagatgcaccgctttgtgcatgtccccgcacttctctgaaccttcatttcacctgtaaaatttcgcctaataacacct-cctcatagagttgttgaggaattcaaatga--gagaaAAGTAGGTACTGTGTCAAGCACCAAGAGAAAAGTCAGCCTGAC-GAGTCAGCCCCATTCCTCTTTGCTGGAGCTCCTTCACTCTCTTCGTCTCCTCTCTGTAGGGGTAGGGTGCTGCGGCAGAGGGGCTGGTGAAAGAAACGCTGAATCAGCATCTGTGAAACTGATGTCCGCAGTGAGGTGCAGAGATTGAAATGCTGGGCCTAGCCAATTTAAGTAAGGAGCAGAGCAAGGTGGCTGCAGCGGTCCCACCCTGGGGG-ACCCTCTTAAAGCAGTCCCACCCTGGGGCATGGCTCAGGTGTCTGCAACG-AGACCTATCCCTTTCTGTGTGTGGGAGGCAGGGGTAAGGCTCG-ACAGCATGATCTCTCTGCGGTTCAGAGGCGGCCACTCCCGCCTGTGAGGATGCTGGTCGTGTGCGTGTGAGGTTGCTGCTT----ATCTGCCAGCCTTCGCCCTGTTGGCCCCGACACACACACTAAAGCCACGGGCACTCTCGAGGGACGCCTGCTGCCAGCAATGTTCTTCCTCCTCTACTCATTCTACTATTTGGTGCTGGTGTCTCTGGCCCTACTA-TGGAAACAGAGGCTCCTCAAACTCCCTCTGCCCCCCAGGGAGAAGTTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92393889 895 - 98464013 TCATTCATAATCA-C----------GTCAC----TATTCACGATGTATCTCGTAAActttacatacatcatcccatttgattctcataacaaacctatgatgtcattgttattcccattctacagatcaggaagccgagactcaggaagacgaaatacattccccacagtcaT---CACGATGGA----------------CTGGAGTTTTGCTTTGCATAA--TCcaggctttgtcg---gatgagcagacccgggtccacgtcctggctctgcagtggcagctgggagatgctgcactttgtgtatgtccctgcaccgctccaaaccttcgtttcac-tgtaaaatttcacctgataacacctccctcctagagttgtggaggaattcaaatga--gagaaaagtatgtgctgtgtcaagcacCGAGAG-AAAGTCAGCCTGAGAGAGTCAGCCCCACTCCTCTTTGCTGGAGCTCCTTCACTCTCTCCATCTCCT-------GGGGTAGGGCACCGTGGCAGAGGGGCTGGCGGAAGAAAGGCTGAACCAGCATCTGTGAAACTGACGTCTGCAGTGAAGCGCAGAGATTGAAATCCTGGGCCTAGCTGATGTAAGTGAGGAGCAGAGCAGGGTGGCTGAAA------CACC------G-TATCTCTTAAAGTGGTCCCACCCTGGG---TGGCTCAGGTGTCTGCCCCA-AGACATATTCCCTTCTGTGTGTGGGAGGCAGGGGTGGGGCTCA-TCAGCCTGACCTCTCCA----TCAGAGGCA--CCCTCCTGCCTGTGAGGATGCCAGTCGTGTATGTGTGAGGATG---------------------------------GCCCCG--AGACACACTAAAGCCATGGGCA--------------------CCAGCAGCGTTCTTCCTCCTTTACTCA----ACTATTCAGTGCTGGTGACTCCGGCCCTGGAATCAGGAACAGAGCCTCTTCACACTCCCTCTGC-CCCCAGGGAGAAGTGAG i calJac3.chr15 C 0 M 1017 s canFam3.chr34 24769213 955 - 42124431 TTACTAATAAtcactcactcaataaaccattgagtgtttattatgta--tcagacactctacataccttattccactgaat----acaacaaacctatgaagtaattattattcccattctacaggtcaggaaaccgaggctcaagaagacaaagtaacttgcccatagtcatatgacttacaagtgctggagccggaattcAGTCATTTAGTCACGTACAAACTCTggactttgtcggcagatgagtagacctgggtccccatcctggctctgctgtgctagctgctatatgtgatac-ctgcacatgtggtttcacccctctgaggtttaatatcacctataaaacct-gttaaacaataactctctcatagagttgttgagggattcaaatgaTGAAAAAAAAGAAGTGATGTGGCTGGCACCAAGAG-ACAGCCAATATAAGAAAGTCAGCCACAGTCCTTAAT----TACCTCCTTCCCTCCCT---TCTCCT-TCTGGAGGGGTGGGGCGGAG-GGCAGCGAGG--------AGAAAGGGTAAACTAGTGCCTGC----------------CTGAGGTGCGCAGGTTGGAATCCCAAGCTTAGCTGACCTAAGTAAGGAACACACCAAGGTG-------CAGTGCCAC-----AGG------CCGAAAGAGATCCCACCCAGGGA-GTGGCTCAGATGCTTCCAGCACAGACGTATGTCCCTTCATGTGTAGGAGGTAGGGGTGGAGTTGGATCAGGGAACTCTCACCGCAGCTTAGGAGCAGCCACT-GTGCTGGTGAGGA----GGGCCCG-----GGGAGGCTGCTGCTCGTCTACCTGCCAGCTCTTGCTCTG-CGGCCCCAGCGCACAC-CCGCGACCATGGGCACCTTCCAGGGCCACCTGCTGGCAGGGACATTCTTCCTCATCTTCTCTCTCTACTACTCAGTGATGGTGTCCTTGGCGCTGCTA-CGGGGACAGAGGTACCTCCGACCCCCTCTGCCCCCGAGGGAGAAGCGAG i canFam3.chr34 C 0 C 0 a score=264581.000000 s hg38.chr3_KI270781v1_alt 33107 90 + 113034 GACACAGGTGGTGGTAGCTGGTGCCACTAGAAGGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCAAGTTATTCTACCCGT s panTro4.chr3 13783460 90 - 202329955 GACACAGGTGGTGGCAGCTGGTGCCACTAGAAAGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCAAGTTATTCTACCCGT i panTro4.chr3 C 0 M 132 s ponAbe2.chr3 13765076 90 - 202140232 GACACAGGTGGTGGTAGCTGGTGCCACTAGAAGGTGTGGTGAAGGTGATCATCACCCTGGCTGGCATCTTACCCGAGTTATTCTACCTGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14322344 90 - 123690457 GACACAAGTGGTGGTGGCTGGTGCCACTAGAATGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCGAGTTATTCTACCCGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103609347 90 + 192599291 GACACAGATGGTGGCAACTGGTGCCACTAGAAGGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCATGTTATTCTACCCGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103248870 90 - 192460366 GACACAGATGGTGGCAACTGGTGCCACTAGAAGGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCATGTTATTCTACCCGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101045056 90 + 187378091 GACACAGATGGTGGCAACTGGTGCCACTAGAAGGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCACGTTATTCTACCCGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4911672 90 + 91754291 GACACAGATGGTGGCAACTGGTGCCACTAGAAGGTGTGGTGAAGGTGGTCATCACCCTGGCTGGCATCTTACCCACGTTATTCTACCCGT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770168 90 - 42124431 GACACAGGTGGTGGCAGCTGGTGCCTGTGCAAGGGATAATGAAGGTGCTCATCTCCCTGGGTGGCATCATTCCCGAATTCTTCTACCCCC i canFam3.chr34 C 0 C 0 e calJac3.chr15 92394784 1017 - 98464013 M a score=93767.000000 s hg38.chr3_KI270781v1_alt 33197 39 + 113034 CTGGAGTAAATCGGCTGATGGTGGTAGACTGGGAGGATC s ponAbe2.chr3 13765166 39 - 202140232 CTGGAGTAAATCGGCTGATGGTGGTAGACTGGGAGGAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14322434 39 - 123690457 CTGGAGTAAATCGGCTGATGGTGGTAGACTGGGAGGATC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103609437 39 + 192599291 CTGGAGTAAATCAGCTGATGATGGTAGACTGGGAGGATC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103248960 39 - 192460366 CTGGAGTAAATCAGCTGATGATGGTAGACTGGGAGGATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101045146 39 + 187378091 CTGGAGTAAATCGGCTGATGATGGTAGACTGGGAGGATC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4911762 39 + 91754291 CTGGAGTAAATCGGCTGATGATGGTAGACTGGGAGGATC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770258 39 - 42124431 CAGGAGTGAACCGGCTGATGATAGTAGACTGGGAGGACC i canFam3.chr34 C 0 C 0 e calJac3.chr15 92394784 1017 - 98464013 M e panTro4.chr3 13783550 132 - 202329955 M a score=42481.000000 s hg38.chr3_KI270781v1_alt 33236 17 + 113034 CGCGGTGGCCATTCGTG s ponAbe2.chr3 13765205 17 - 202140232 CGCGGTGGCCATTTGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14322473 17 - 123690457 CGCGGCAGCCATTCGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103609476 17 + 192599291 CGCGGTGGGCATTTGTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103248999 17 - 192460366 CGCGGTGGGCATTTGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101045185 17 + 187378091 CGCGGTGGGCATTTGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4911801 17 + 91754291 CGCGGTGGGCATTTGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92395801 17 - 98464013 CGCAGCGGCCATTCATG i calJac3.chr15 M 1017 I 1 s canFam3.chr34 24770297 17 - 42124431 CCCGGCGCCCGTTCGTG i canFam3.chr34 C 0 C 0 e panTro4.chr3 13783550 132 - 202329955 M a score=1249105.000000 s hg38.chr3_KI270781v1_alt 33253 357 + 113034 TTCAAGGACAGCTGGCAGCACATCACCATGTACGAGTTCTTTATGCTCACTGGCGTGGTGGACATTGTAAGCCAGTCGTGTCAGGAATGGTAGAATATGAAGCTAGAGCAAGCAGTCAAGGCCTTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCGTGTGCGTGAGCTCTTCAGCGTGCCCCCCTTCCTGGTCTCCCTGGTGCTCACCATCAAGGTCTGGGTCCCTGACCAGCCCCAGCTCTGGGTGCTCAAGACCTGGGTGGGGCTGGGGCTC----AGCAACTGGATGCTGCAGCTGTGTGTGCTGATGTTTGCGCCTCCCTCC s panTro4.chr3 13783682 357 - 202329955 TTCAAGGACAGCTGGCAGCACATCACCATGTACGAGTTCTTTATGCTCACTGGCGTGGTGGACATTGTAAGCCAGTCGTGTCAGGAATGGTAGAATATGAAGCTGGAGCAAGCAGTCAAGGCCTTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCGTGTGCATGAGCTCTTCAGCGTGCCCCCCTTCCTGGTCTCCCTGGTGCTTACCATCAAGGTCTGGGTCCCTGACCAGCCCCAGCTCTGGGTGCTCAAGACCTGGGTGGGGCTGGTGCTC----AGCAACTGGATGCTGCAGCTGTGTGTGCTGATGTTTGCGCCTCCCTCC i panTro4.chr3 M 132 C 0 s ponAbe2.chr3 13765222 357 - 202140232 TTCAAGGACAGCTGGCAGCACATCACCATGTATGGGTTCTTTATGCTCAGTGGCGTGGTGGAGATTGTAAGCCAGTTGTGTCAGGAATGGCAGAATATGAAGCTGGAGCAAGCAGTCGAGGCCTTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCGTGTGCATGAGCTCTTCAGCGTGCCCACCTTCCAGGTCTCCCTGGTGCTCACCATCAAAGTCTGGGTCCCTGACCAGCCCCAACTCTGGGTGCTTAAGACCTGGATGGGGCTGGTGCTC----AGCAACTGGATGCTGCAGCTCTGTGTGCTGATGTTTGTGCCTCCCTCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14322490 357 - 123690457 TTCAAGGACAGCTGGCAGCACATCGCCATGTATGAGTTCTTTATGCTCAGTGGCGTGGTGGACATTGTAAGCCAGTCGTGTCAGGAATGGCAGAGTATGAAGCTGGCGCAAGCAGTCGAGGCCTTGGGCTCCTATGTGCTGGCACTACTGATGGCAGGCCACATTGAGAACAAGGGCACCCTGGAGATCCGTGTGCATGAGCTCTTCAGCCTGCCCACCTTCCTGGTCTCCCTGGTGCTCACCATCAAGGTCTGGGTCCCTGACCAGCCCCAGCTCTAGGTGCTTAAGACCTGGATGGGGCTGGTGCTC----AGCAACTGGATGCTACAGCTGTGTGTGCTGATGTTTGTGCCTCCCTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103609493 357 + 192599291 TTCAAGGACAGCCAGCAGCACATCACCATGTATGGGTTCTTTATGCTCAGTGGCGTGGTGGACTTCGTAAGCCAGTCATGTCAGGTGTGGCAGAATATGAAGCTGGAGCAAGCAGCTGAGGCCCTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCATGTGTACGAGCTCTTCAGCGTGCCCACCTTCCTGGTCTCCCTGGTGCTCACCTTCAAGGTCTAGGTCCCTGTCCAGCCCCAACTCTGGGTGCTCAAGACCTGGACGGGGCTGGTGCTC----AGCAACTGGATGCTGCAGCTGTGTGTGCTGATGTTTGTGCCTCCCTCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103249016 361 - 192460366 TTCAAGGACAGCCAGCAGCACATCACCATGTATGGGTTCTTTATGCTCAGTGGCGTGGTGGACTTCGTAAGCCAGTCATGTCAGGTGTGGCAGAATATGAAGCTGGAGCAAGCAGCCGAGGCCCTGGGCTCCTATGTACTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCATGTGTACGAGCTCTTCAGCGTGCCCACCTTCCTGGTCTCCCTGGTGCTCACCTTCAAGGTCTAGGTCCCTGTCCAGCCCCAACTCTGGGTGCTCAAGACCTGGACGGGGCTGGTGCTCAGCAAGCAACTGGATGCTGCAGCTGTGTGTGCTGATGTTTGTGCCTCCCTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101045202 357 + 187378091 TTCAAGGACAGCCAGCAGCACATCACCACGTATGGGTTCTTTATGCTCAGTGGCGTGGAGGACTTCGTAAGCCAGTCATGTCAGGTGTGGCAGAATATGAAGCTGGAGCAAGCAGCCGAGGCCCTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACATTGAGAACAAGGGCACCCTGGAGATCCATGTGTACGAGCTCTTCAGCGTGCCCACCTTCCTGGTCTCCCTGGTGCTCACCTTCAAGGTCTAGGTCCCTGTCCAGCCCCAACTCTGGGTGCTCAAGACCTGGACGGGGCTGGTGCTC----AGCAACTGGATGCTGCAGCTGTGTGTGCTAATGTTTGTGCCTCCCTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4911818 357 + 91754291 TTCAAGGACAGCCAGCAGCACATCACCATGTATGGGTTCTTTATGCTCAGTGGCGTGGTGGGCTTCATAAGCCAGTCATGTCAGGTGTGGCAGAATATGAAGCTGGAGCAAGCAGCCGAGGCCCTGGGCTCCTATGTGCTGGCACTACTGATGGCAGCCCACACTGAGAACAAGGGCACCCTGGAGATCCATGTGTACGAGCTCTTCAGCGTGCCCATCTTCCTGGTCTCCCTGGTGCTCACCTTCAAGGTCTAGGTCCCTGTCCAGCCCCAACTCTGGGTGCTCAAGACCTGGACGGGGCTGGTGCTC----AGCAACTGGATGCTGCAGCTGTGTGTGCTGATGTTTGTGCCTCCCTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92395819 335 - 98464013 CCCAAGGACAGCCAGCAGCACATCACCAGGGATGGGTTCTTTATGCTCAGTGGCGTGGAGGACATCCTAAGCCAGTCACGTCAGGCACGGCAGAATATG-------------------AGGCTCTGGGCTCCTATGTGCTGGCACTACTGGTGGCAGCCCACATTGAGAACAGGGGTACCCTGGAGATCCATGTGCACGTGC---TCATCGTACCCACCTTCCTGGTCACCCTGGTGCTCACCATCGAGGTGTGGGTGCCTGATCAGCAGCTGCTCTGGGTGCTCAAGACCTGGATGGGGCTGGTGCCC----AGCGAATGGACGCTGCAGCTGCGTGTCCTGATGTACGTGCCTCCCCCC i calJac3.chr15 I 1 C 0 s canFam3.chr34 24770314 357 - 42124431 TTCTACGAGAACTGGGACCACGTCACCATGTACGGCTTCTTCCTGCTTAGCGGCGTGGTGGACATCGCGAGCCGGGCGTGCCAGGCACGGCAGACCGCCAAGCTGGAGCAGGCGGCGGAGGCCCTGGCCTTCTGCGTGCTGGCGCTGCTGATGGCGGCGCACCTGGAGAACAGGGGCGCCCTGGAGATCCGAGTGCACGCGCTCTTCGTGGCGCCCGCCTTCCTGGTTGGCCTGGTGCTCGCCATAGAGGTCTGGGTGCCCGACCAGCCCGCGCTGTGGGTGCTCAAGACCTGGATGGGCCTGGTGCTC----AGCAGCTGGATGGTGCAGCTGTCTGTGCTGATGTACGCGCCTCCCTCT i canFam3.chr34 C 0 C 0 a score=1044870.000000 s hg38.chr3_KI270781v1_alt 33610 375 + 113034 GGACAGCCCTGCAG-GTGGAGAACCCCATGGACCTTGCCTTCCTCACTCGCTTCTTCTCCTGGCACCTGGGCTTGGGGGCTGCCGTGCTGGCTGCTGTCTATGGCCTCTGCAGCCTCTGGCACCGTCACTGCTCCTCCTGGACAGCGTTACCAGGGGCCAGGTACTAGCCGTGCCTCACCAATTCCAGTGGTGAAGAGCTTGAGAAGCTCAGGGCAGAGGCTGTGCTGCTGGATGGAGGCGTCTAGGT--ACA-------------------------------------------GAAACTGTCTTTGTTCTATGCCTTTTGTAATGAGAGTTTCAAGGGTGCCCACAGCACGCATAGCATGGAAATGCCTTAGAATTCAC----AGGCTAGCTTCTATCTCGGGAGCCATCTTTCTCGTTCCC s panTro4.chr3 13784039 375 - 202329955 GGACAGCCCTGCAG-GTGGAGAACCCCATGGACCTTGCCTTCCTCACTCGCTTCTTCTCCTGGCACCTGGGCTTGGGGGCTGCCGCGCTGGCTGCTGTCTATGGCCTCTGCAGCCTCTGGCACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGGCCAGGTACTAGCCGTGCCTCACCAATTCCAGTGGTGAAGAGCTTGAGAAGCTCAGGGCAGAGGCTGTGCTGCTGGATGGAGGCGTCTAGGT--ACA-------------------------------------------GAAACTGTCTTTGTTCTATGCCTTTTGTAATGAGAGTTTCAAGGGTGCCCACAGCACGCATAGCATGGAAATGCCTTAGAATTCAC----AGGCTAGCTTCCATCTCGGGAGCCATCTTCCTTGTTCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13765579 375 - 202140232 GGACAGCCCTGCAG-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTCTCTTCTTCTCCTGGCACCTGGGCTTGGGGGCTGCCGTGCTGGCTGCTGTCTATGGCTTCTGCAGCCTCTGGCACCATCAGTGCTCCTCCTGGACAGCGTTCCCAGGGGCCAGGTACCAGCTGTGCCTCACCAATTCCAGTGGTGAAGAGCTTGAGAAGCTCAGGGCAGAGGCTGTGCTGCTGGATGGAGGCATCTAGGT--ACA-------------------------------------------GAAACTGTCTTGGTTCTATGCCTTTGGTAATGAGAGTTTCAAGGGTGCCCACAGCACGTATAGCATGGAAATGTCCTAGAATTCAC----AGGCTAGCTTCCATCTCAGGAGCCATCTTCCTTGTTCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14322847 372 - 123690457 GGACAGCCCTGCAG-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTC---TGTTctcctggcagctgggcttgggggctgccttgctggctgctgtctATGGCCTCTGCAGCCTCTGGCACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGGCCAGGTACCAGCTGTGCCTCACCAATTCCAGTGGTGAAGAGCTTGAGAAGCTCAGGGCAGAGGCTGTGCTGCTGGATGGAGGCATCTAGGT--ACA-------------------------------------------GAAACTGTCCTTGTTCTATGACTTTTGTAATGAGAGTTTCAAGGGTGCCCACAGCACGCATAGCATGGAAATGTCCTAGAGTTCAC----AGGCTAGCTTCCATCTCAGGAGCCATCTTCCTTATTCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103609850 415 + 192599291 GGACGGCCCTGCAA-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTC---TCTTCTCCTGACACCTGGGCTTGGGGGCTGCCGTGCTGGTTGCTGTTTATGGCCTCTGCAGCCTCTGGCACCGTCACTGCTCCTCCTGGACAGCGTTCCCAGGGCCCAGGTACCAGCCGTGCCTCACCAATTCCAGTAGCGAAGAGTTTGAGAAGCTCAGGGCAGAGGCCGTGCTGCTGGATGGAAGCGTCTAGCT--ACAGGCCGTGCTGCTGGATGGAAGCGTCTAGAGGCCGTTCTGGATGGAAACGGTCCTTGTTCTATGCCTTTTGTAAGGAGAGTTTCAAGGGCGCCCATGGCATGCATAGCATGGAAATGTCCTGGAATTCAC----AGGCTGGTTTCCATCTCAGTAGCCATCTTCCTTATTCCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103249377 372 - 192460366 GGACGGCCCTGCAA-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTC---TCTTCTCCTGACACCTGGGCTTGGGGGCTGCCGTGCTGGTTGCTGTTTATGGCCTCTGCAGCCTCTGGCACCGTCACTGCTCCTCCTGGACAGCGTTCCCAGGGCCCAGGTACCAGCCGTGCCTCACCAATTCCAGTAGCGAAGAGTTTGAGAAGCTCAGGGCAGAGGCCGTGCTGCTGGATGGAAGCGTCTAGCT--ACA-------------------------------------------GAAACGGTCCTTGTTCTATGCCTTTTGTAAGGAGAGTTTCAAGGGCGCCCATGGCATGCATAGCATGGAAATGTCCTGGAATTCAC----AGGCTGGTTTCCATCTCAGTAGCCATCTTCCTTATTCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101045559 372 + 187378091 GGACAGCCCTGCAA-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTC---TCTTCTCCTGACACCTGGGCTTGGGGGCTGCCATGCTGGTTGCTGTTTATGGCCTCTGCAGCCTCTGGCACCGTCACTGCTCCTCCTGGACAGCGTTCCCAGGGCCCAGGTACCAGCCGTGCCTCACCAATTCCAGTAGCGAAGAGTTTGAGAAGCTCAGGGCAGAGGCCGTGCTGCTGGATGGAAGCGTCTAGCT--ACA-------------------------------------------GAAACTGTCCTTGTTCTATGCCTTTTGTAATGAGAGTTTCAAGGGCGCCCATGGCATGCATAGCATGGAAATGTCCTGGAATTCAC----AGGCTGGTTTCCATCTCAGTAGCCATCTTCCTTATTCCC i papAnu2.chr2 C 0 I 318 s chlSab2.chr15 4912175 372 + 91754291 GGACAGCCCTGCAA-GTGGAGAACCCCACGGACCTTGCCTTCCTCACTC---TCTTCTCCTGACACCTGGGCTTGGGGGCTGCCGTGCTGGTTGCTGTTTATGGCCTCTGCAGCCTCTGGCACCGTCACTGCTCCTCCTGGACAGCGTTCCCAGGGCCCAGGTACCAGCCGTGCCTCACCAATTCCAGTAGCGAAGAGTTTGAGAAGCTCAGGGCAGAGGCCGTGCTGCTGGATGGAGGCATCTAGCT--ACA-------------------------------------------GAAACTGTCCTTGTTCTATGCCTTTTGTAATGAGAGTTTCAAGGGTGCCCATGGCACGCATAGCATGGAAATGTCCTGGAATTCAC----AGGCTAGTTTCCATCTCAGTAGCCATCTTCCTTGTTCCC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770671 379 - 42124431 GGGCAGCCCTGGAGAGCGGAAAACCCCGAGGACCTGGCCTTCCTCCCCATCTTCTTCTGCTGGCACCTGGCCTTGGGGGCGGCCCTACTGGCCGCCGTCTATGGTCTCTGCAGCCTCTGGCACCATCGCTCCTCCTCTCGGAGAGAGGTCCCGGGCGCCAAGTACCGGCCGTGTCCCAGGGGCTACAGCAACGAAGACCTGGAGAAGCTGGGCGCCGAGGGCGTGCTGCGGGATGAGGGCGTCTAGGCGAGCA-------------------------------------------GCGCCTGTCTCCGTGCTCTGCCTTTGGTAAGGAGAGTTTCCAGGGTGCCCACGGTGCACGCAGCACGGAGATGTCTCAGGATCCACGACGGGGCT---TTCTGTCACAGGCGTCACCTTCCTTGTTCCT i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C a score=358699.000000 s hg38.chr3_KI270781v1_alt 33985 143 + 113034 AAATAAACCTGCCAGCCCCTGGGGTAACTTCTCATCCATCATTCTCTTCTCTCCAGGTCTGTCTCTTTTCTCTCTCATTA-----------TTCTGGCCAAGCACATACATGAA----------ATGAGAACAGGAGTGCTGCTTTTTTCTGGCAGTTTTCAGG s panTro4.chr3 13784414 143 - 202329955 AAATAAACCTGCCAGCCCCTGGGGTAACTTCTCATCCATCATTCTCTTCTCTCCAGGTCTGTCTCTTTTCTCTCTCATTA-----------TTCTGGCCAAGCACATACATGAA----------ATGAGAATAGGAGTATTGCTTTTTTCTGACAGTTTTCAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13765954 143 - 202140232 AAATAAACCTGCCAGCTCCTGGGGTAACTTCTCATCCATCATTCTCTTCTCTCCAGGTCTGTCTCTTTTCTGTCTCATTA-----------TTCTGGCCAAGCACATACGTGAA----------ATGAGAACAGGAGTAGTGCTTTTTTCTGACAGTTTTCAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14323219 142 - 123690457 AAATAAACCTGCCAGCTCCTGGGGTAAATTCTCATCCATCATTCTTTTCTCTCCAAGTCTGTCTCTTTTCTGTCTCA-TA-----------TTCTGGCCAAGCACATACATGAA----------ATGAGAACAGGAGTAGTGCTTTTTTCTGACAGTTTTCAGG i nomLeu3.chr11 C 0 I 49270 s rheMac3.chr2 103610265 139 + 192599291 AAATAAACCTGCTAGTTCCTGAGGCAACTTCTCATCCATCACTCTCTTCTCTCCAGGTCTGTTTCTTTTCTGTATCATTA-----------TTCTGGCCAAGCAC-TACATGAA----------ATGAGAAC---AGTAGTGCTTTTTTCTGACAGTTTTCAGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103249749 139 - 192460366 AAATAAACCTGCTAGTTCCTGAGGCAACTTCTCATCCATCACTCTCTTCTCTCCAGGTCTGTTTCTTTTCTGTATCATTA-----------TTCTGGCCAAGCAC-TACATGAA----------ATGAGAAC---AGTAGTGCTTTTTTCTGACAGTTTTCAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101046249 139 + 187378091 aaaaaaacctgctagtTCCTGAGGCAACTTCTCATCCATCACTCTCTTCTCTCCAggtctgtttcttttctgtatcATTA-----------TTCTGGCCAAGCAC-TACATGAA----------ATGAGAAC---AGTAGTGCTTTTTTCTGACAGTTTTCAGG i papAnu2.chr2 I 318 C 0 s chlSab2.chr15 4912547 139 + 91754291 AAATAAACCTGCCAGTTCCTGAGGCAACTTCTCATCCATCACTCTCTTCTCTCCAGGTCTGTTTCTTTTCTGTATCATTA-----------TTCTGGCCAAGCAC-TACATGAA----------ATGAGAAC---AGTAGTGCTTTTTTCTGACAGTTTTCAGG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24771050 160 - 42124431 CAATAAACCTTTCAGCTCCTGGGGTTCCTT-GGATCTGTTACTCTGTTCTCTCCAGGTCTCCCTCTCTCCTGCCTCACTGTCCAGTAAGGTTCCCGACCAGGGACTTGTGTGGACTCCTGTGATATGAGAAC---AGTAGGGCTTTACTCTGATGGCTTTTGGG i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C a score=380269.000000 s hg38.chr3_KI270781v1_alt 34128 204 + 113034 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAGACAGAGAGG---AAAGAGCGCCC---GTAGACACCATATTTCTTAGATGGGGCAGGACTACGGTATGCACGGGTATGCCTGCAAATGAAGTCTCTCAATGTGTGAAAGACAGGGGGTCCGTTTTTCCATAATGGTGAAGTCTTCTGTTTTCTCAATTTCTCTGTTT--TTTATTCACTCT s panTro4.chr3 13784557 204 - 202329955 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAAACGGAGAGG---AAAGAGGGCCC---GTAGACACCATATTTCTTAGATGGGGCAGGACTACGGTATGCACGGGTATGCCTGCAAATGAAGTCTCTCAATGTGTGAAAGACAGGGGGTCCGTTTTTCCATAATGGTGAAGTCTTCTGTTTTCTTAATTTCTCTGTTT--TTTATTCACTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13766097 199 - 202140232 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAGAC-----GG---AAAGAGGGCCC---GTGGACACTGTATTTCTTAGATGGGGCAGGACTACGGTATGCACGGGTATGCCTGCAGATGAAGTCTCTCAACGTGTGAAAGAGAGGGGGTCCGTTTTTCCATAATGGTGAAGTCTTCTGTTTACTTAATTTCTCTGTGT--TTTATTCACTCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103610404 202 + 192599291 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAGACGGAGAGG---AAAGAGGGCTC---GTGGACACTGTATATCTTAGGTGGTGCAGGACTACTGTATGCACGGGGATGCCTGCAAATGAAG--TCTCAATGTGTGAAAGAGAGGAGCTCCGTTTTTCCATAATGGAGAAGTCTTCTGTTTTCTTAATTTCTCTGTTT--TTTATTCACTCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103249888 202 - 192460366 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAGACGGAGAGG---AAAGAGGGCTC---GTGGACACTGTATATCTTAGGTGGTGCAGGACTACTGTATGCACGGGGATGCCTGCAAATGAAG--TCTCAATGTGTGAAAGAGAGGAGCTCCGTTTTTCCATAATGGAGAAGTCTTCTGTTTTCTTAATTTCTCTGTTT--TTTATTCACTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101046388 202 + 187378091 ATCCAAGAGGAGGAAATGAATTGAGGAAGTAGACGGAGAGG---AAAGAGGGCTC---GTGGACACTGTATATCTTAGGTGGTGCAGGACTACTGTATGCACGGGGATGCCTGCAAATGAAG--TCTCAATGTGTGAAAGAGAGGAGCTCCGTTTTTCCATAATGGAGAagtcttctgttttcttaatttctctgttt--tttattcACTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4912686 202 + 91754291 ATCCAAGAGGAGGAAATTAATTGAGGAAGTAGACGCAGAGG---AAAGAGGGCTC---GTGGACACTGTATATCTTAGGTGGTGCAGGACTACTGTATGCACGGGGATGCCTGCAAATGAAG--TCTCAATGTGTGAAAGAGAGGAGCTCCGTTTTTCCATAATGGAGAAGTCTTCTGTTTTCTTAATTTCTCTGTTT--TTTATTCACTCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24771210 195 - 42124431 ATCCAAGAGAAGGCAATGCAACAAGGAGAGGGAGATGGGGGATCACTGGGGACCCCGGGAGGGTTCTATCAGTTTGAGGCAGAGCTGGCTT--------------CATCTGTGCAGCTCAAGGGTTTTAAGGTGTGA---AGAGGGGGTTCCTTTTGGCACAAGGGTGAGGACTTCTGTTTTCTTCACTCCTCTCTCTGGTTTATTTACCTT i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14323361 49270 - 123690457 I a score=305205.000000 s hg38.chr3_KI270781v1_alt 34332 171 + 113034 CAGTATGGCAGTATGAGGAATTTTCATG---tttgttt------tttgtttgttttcgagatggagtctcactctgtcacccaggctggagtgcagtgacttggtctcggctcactgcaacctccgtctcctaggttcaagcaattctcctgcctcagcctcctgagtagctgggactac s panTro4.chr3 13784761 171 - 202329955 CAGTATGACAGTATGAGGAATTTTCATG---tttgttt------tttgtttgttttcgagacggagtctcactctgtcacccaggctggagtgcagtgacttggtctcggctcactgcaacctccttctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13766296 179 - 202140232 CAGTACGGCAGTATGAGGAATTTTCGTGttttttgtttt-tttgtttgtttgttttcgagatggagtctcactctgtcacccaggctgcagtgcagtgactcggtctcggctcactgcaacctgcgtctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103610606 180 + 192599291 CAGTATGGCAGTATGAGGAACTTTTGTGttttttgttgtgtttgtttatttgtttttgagatggagtctcactccgtcccccaggctggagtgcaatggctcagtctccgctcactgcaacctccgtctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggactac i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103250090 180 - 192460366 CAGTATGGCAGTATGAGGAACTTTTGTGttttttgttgtgtttgtttatttgtttttgagatggagtctcactccgtcccccaggctggagtgcaatggctcagtctccgctcactgcaacctccgtctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggactac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101046590 180 + 187378091 CAGTATGGCAGTATGAggaacttttgtgttttttgttttgtttgtttgtttgtttttgagatggagtctcactctgtcccccaggctggagtgcaatggctcagtctccgctcactgcaacctccgtctcctaggttcaagcaattctcctgcctcagcctcccgagtagctgggactac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4912888 180 + 91754291 GAGTATGGCAGTATGAGGAACTTTTGTGttttttgttttgtttgtttgtttgtttttgagatggagtctcactctgtcccccaggctggagtgcaatggctcagtctccgctcactgcaacctctgtctcctaggttcaagcaattctcctgcctcagcctcccgagtagctgggactac i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24771405 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14323361 49270 - 123690457 I a score=792713.000000 s hg38.chr3_KI270781v1_alt 34503 441 + 113034 aggcacccaccaccatgcccagctaatttttgcatttttagtagagacggggtttcaacacgttggccaggctggtctcaaactcctgacctcaggcgatcctcccacctcagcctgccaaagtgctgggattacaggcatgagccaccgcacccggccA-TTTTTTG-TGTTTTAAACCTAAACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGCTTGGGCAGTTGCAGG---GGGGTGTGGTT-CCAATCAATTTAGCAGGGGATCAAGAAGAGggagaaaggaggccacggag----gaattccaaagctgcttgtcagaaatgaaggtgatttaaatatgattttaaattgtttgtgtttttctgtgatacaaaacaactccattgttccaactcattcagtaaagtctat--tacatgtgtacacgtctcatg-- s panTro4.chr3 13784932 441 - 202329955 aggcgcccgccaccatgcctggctgatttttgcatttttagtagagacggggtttcaacacgttggccaggctggtctcaaactcctgacctcaggcgatccgcccacctcagcctgccaatgtgctgggattacaggcatgagccaccgcacctggccA-TTTTTTG-TGTTTTAAACCTGAACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGCTTGGGCAGTTGCGGG---GGGGTGTGGTT-CCAATCAATTTAGCAGGGGATCAAGAATTGggagaaaggaggccagggag----gaattccaaagatgcttgtcagaaatgaaggtgatttaaatacgattttaaattgtttgtgtttttctgtgatacaaaacaactccattgctccaactcattcagtaaagtctat--tacatgtatacacgtctcatg-- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13766475 444 - 202140232 aggcacccaccaccacgcccagctaatttttgcattgttggtagagatggggtttcaacacgttggccaggctggtcttgaactcctgacctcaggcgatctgcccacctcggcctcccaaagtgctgggattagaggcatgagccaccgcaccaggccATTTTTTTG-TTCTCTAAACCTAAACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGGTTGGGCAGTTGCGGGGGTGGGGGGTGGTTGGCAATCAGTTTAGCAGGGGGTCaagactagggag--aggaggccagggag----gaattccaaagatgcttgtcagaaatgaaggtgatttaaatatgattttaaattgtttgtgtttttccgtgatacaaaacaactccattgttccaactcattcagtaaagtctat--tacatgtatacaggtctcatg-- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103610786 440 + 192599291 aggcgcctgccaccacgcccggctaatttttgcatttttagtagagacagggtttcaacaccttggccaggctggtctcaaactcctgacctcaggcgatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcacctggccA-TTTTTTG-TTTTTTAAACCTAAACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGGTTGGGCATTTG--GG---GGTGTGTGGTTGGCAATCAATTTAGCAGGGGGTCaagactagggagaaaggaggccagggag----gaattccaaagatgcttgtcaaaaatgaaggtgatttaaatataatgttaaattgtttgtgtttttctgtgatacaaaacaactctgttgttccaactcattcagtaaagtctat--tacatgtgtacacgtttcatg-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103250270 440 - 192460366 aggcgcctgccaccacgcccggctaatttttgcatttttagtagagacagggtttcaacaccttggccaggctggtctcaaactcctgacctcaggcgatccacccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcacctggccA-TTTTTTG-TTTTTTAAACCTAAACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGGTTGGGCATTTG--GG---GGTGTGTGGTTGGCAATCAATTTAGCAGGGGGTCaagactagggagaaaggaggccagggag----gaattccaaagatgcttgtcaaaaatgaaggtgatttaaatataatgttaaattgtttgtgtttttctgtgatacaaaacaactctgttgttccaactcattcagtaaagtctat--tacatgtgtacacgtttcatg-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101046770 440 + 187378091 aggcgcctgccaccacgcccggctaatttttgcatttttagtagagacagcgtttcaacaccttggccaggctggtctcaaactcctgacctcaggcgatccgcccacctcagcctcccaaagtgctgggattataggcatgagccaccgcacctggcca-ttttttg-ttttttaaacctaaACTAAATGAGGCCACTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGGTTGGGCATTTG--GG---GGTGTGTGGTTGGCAATCAATTTAGCAGGGGGTCAAGACTAGGGAGAAAGGAGGCCAGGGAG----GAATTCCAAAGATGTTTGTCAAAAATGAAGATgatttaaatataatgttaaattgtttgtgtttttctgtgaTACAAAACAACTCTGTTGTTCCAATTCATTCAGTAAAGTCTAT--TACATGTATACACGTTTCATG-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4913068 441 + 91754291 aggcgcctgccaccacgcccggctaatttttgcatttttagtagagacagggtttcaacaccttggccaggctggtctcaaactcctgacctcaggcgatccgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccacacctggccA-TTTTTTGTTTTTTTAAACCTAAACTAAATGAGGCCTCTTCTGCCTTATGAGAGAGGAAGGAATGAGAAGGTTGGGCACTTG--GG---GGTGTGTGGTTGGCAATCAATTTAGCAGGGGGTCaagactagggagaaaggaggctagggag----gaattccaaagacgcttgtcaaaaatgaaggtgatttaaatataatgttacattgtttgtgtttttctgtgatacaaaacaactctgttgttccaactcattcagtaaagtctat--tacatgtatacacgtttcatg-- i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24771405 285 - 42124431 AGGCGCTGAGCAGGATGCAGAACTTGTTT---------------------------------------------------------------------------CCTCCTCG-------------------------------------------------CTGTAGT-TATTTTACATCTAAATGGAACGAGGCTACTTCTGCCTTCTGCAGGAGCAGAG-----------------------GG---GG----------TCAGTCAATGTAGCAGGTGCTCAAGTCT-----GAGAGGAGGCAAAGAGGAAGAGAGTCCcggaggtgggtggaagaagcaaggatggtggagat-taactttcagttgcttgggttttactgtaatataa---aactccattgtcacaactctttcactaaactctatgataccagtctatgtgtgtcttgtg i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14323361 49270 - 123690457 I a score=1121685.000000 s hg38.chr3_KI270781v1_alt 34944 484 + 113034 tgagtgattctga-gggaagccagagaaagagcccatatctcaattgacaggaaaagaacacggaggagggggaaagaattgccatgaa--at--ggggtgcaagtgatctcagtgcttctgaagacacaggaactcagagctgagagagaatctgagggtgtcagtcccctggaatgtgcaggaatattttcag---atctttggtcttctc-tcagaatggg--------atgCTAATAAA------------TTCACATATTTGGTGAAATATA-TGAAAGCAAATTATATAAAATTACATATCTCTGGGTACAGTTAGGAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTGAAGAGGCAAAAAGAA---AAGAGAT-GCTGGCCATAGATGTGGAGAAAGAACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ACAACACCCCGTGTGCAGCCTGGAATGCTCTCCTCAGAC s panTro4.chr3 13785373 488 - 202329955 tgagtgattctgaggggaagccagagaaagagcccagatctcaattgacaggaaaagaacagggaggagggggaaagaattgccatgaa--at--ggggtgcaagtgatctcagtgcttctgaagacagaggaactcagagctgagagagaatctgagggtgtcagtcccctggaatgtgcaggaatattttcagtcaatctttggtcttctc-tcagaatggg--------atgCTAATAAA------------TTCACATATTTGGTGAAATATA-TGAAAACAAATTATATAAAATTACGTATCTCTGGGTACAGTTAGGAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTGAAGAGGCAAAAAGAA---AAGAGAT-GCTGGCCATAGATGTGGAGAAAGAACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ACAACACCCCGTGTGCAGCCTGGAATGCTCTCCTCAGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13766919 486 - 202140232 tgagtgattctgaggggaagccagagaaagagcccagatctcaattgacaggaaaagaacggggaggagggggaaagaactgctgtaaa--at--ggggtgcaagtgatctcagtgattctgaagacacaggaactcagagctgagagagaatctgagggtgtcagtcccctggaatgtgcaggaatattttcagccaatctttggtcttctc-tcagaatggg--------atgCTAATAAA------------TTCACATATTTGGTGAAATATA-TGAAAGCAAATTATATAAAATTACGTATCTCTGTGTACAGTTAGGAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCACTTAGAAATTTGAAGAGGCAAAA--AA---AAGAGAT-GCTGGCCATAGATGTGGAGAAAGGACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ACAACACCCCGTGCGCAGCCAGGAATGCTCCCCTCAGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14372631 492 - 123690457 tgagtgattctgg-aagaacacatagaaaaggctcatatctgggttggt------------gggagcaaagggaaagaatcactgtgaactgt--gggaggtaaatgacctcagcagtgctgaagatgcaggaactca----tcagagggctcctgagaacatccacccc----AGAGTTCATGGACATTTTCAGAAAGCCTCTGGGCTTCTC-CCAGAACGAGGAGAGAAAGTGTCCATAAACGATGATGGCAGCTGATGTATAAAATGAAATAGAGCTACAGCAAACTACGTAGAAATATGCATCCCTTGGTGCAATTGGGAGGCCACCTCTTCCACTGGCTTGAGCCTGCTTGCATGAGATGGAAAAGCACAACGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGAT-GCTGTCCATCGATGTAGGGAAAGTATCACAAAGTAAAATCCCCACTAGTG-------------------AAGCTGCTACAATTCCACAAAAGTCTGTG----GTCAGAAATGCTGTTATTGAAC i nomLeu3.chr11 I 49270 I 74 s rheMac3.chr2 103611226 482 + 192599291 tgagtgattcagaggggaagccagagaaagagcccagatctcaattggtaggaaaagaacggg-------gtgaaagaactgccatgaa--at--ggggtgcaagtgatctcagtggttctgaagacacaggaactcagagctgagagagaatctgagggtgtcagtaccctggaatgtgcaggaatattttcaaccaatcattggtcttctc-tcaggatgag--------gTGCTAATAAA------------TTCACATATTCGGTGAAATATA-TGAAAGCAAATTATATAAAATTACATATCTCTGGGTACAGTTAGAAAGCCATTGCTTCTAATAGTATGAGCCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTGAAGACGCAAAAAGAA---AAGAGATGGCTGGTCACAGATGTGGAGAAAGGACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ATGACATCCTGTGTGCAGCCAGGAATGCTCTCCTCAGAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103250710 482 - 192460366 tgagtgattcagaggggaagccagagaaagagcccagatctcaattggtaggaaaagaacggg-------gtgaaagaactgccatgaa--at--ggggtgcaagtgatctcagtggttctgaagacacaggaactcagagctgagagagaatctgagggtgtcagtaccctggaatgtgcaggaatattttcaaccaatcattggtcttctc-tcaggatgag--------gTGCTAATAAA------------TTCACATATTCGGTGAAATATA-TGAAAGCAAATTATATAAAATTACATATCTCTGGGTACAGTTAGAAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTGAAGAGGCAAAAAGAA---AAGAGATGGCTGGTCACAGATGTGGAGAAAGGACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ACGACATCCTGTGTGCAGCCAGCAATGCTCTCCTCAGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101047210 482 + 187378091 TGAATGATTCAGAGGGGAAGCCAGAGAAAAAGCCCAGATCTCAATTGGTAGGAAAATAACAGG-------GTGAAAGAACTGCCATGAA--AT--GGGGTGCAAGTGATCTCAGTGGTTCTGAAGACACAGGAACTCAGAGCTGAGAGAGAATCTGAGGGTGTCAGTACCCTGGAATGTGCAGGAATATTTTCAACCAATCATTGGTCTTCTC-TTAGGATGAG--------GTGCTAATAAA------------TTCACATATTCGGTGAAATATA-TGAaagcaaattatataaaattacgtGTCTCTGCGTACAGTTAGAAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTgaagaggcaaaaagaa---aagagatggctGGTCACAGATGTGGAGAAAGGACCATAGAGAAAAGTCCCCA-TGATG-------------------AAGCTGCTGCAATT--ACGACACCCTGTGTGCAGCCAGGAATGCTCTCCTCAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4913509 482 + 91754291 tgagtgattcagaggggaagccagagaaagagcccagatctcaattggtaggaaaagaatggg-------gtgaaagaactgccatgaa--at--ggggtgcaagtgatctcagtggttctgaagacacaggaactcagagctgagagagaatctgagggtgtcagtaccctggaatgagcaggaatattttcaaccaatcattggtcttctc-tcaggatgag--------gTGCTAATAAA------------TTCACATATTCGGTGAAATATA-TGAAAGCAAATTGTATAAAATTACATATCTCTGGGTACAGTTAGAAAGCCATTGCTTCTAATAGTATGAGTCAGCTTAAGTGAGATGGACACACCCAGCATTTAGAAATCTGAAGAGGCAAAAAGAA---AAGAGATGGCTGGTCACAGATGTGGAGAAAGGACCATAGAGAAAAGTCACCA-TGATG-------------------AAGCTGCTGCAATT--ACGACACCCTGTGTGCAGCCAGGAATGCTCTCCTCAGAC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24771690 506 - 42124431 tgagtgattctggggccagatcaaagaaaaggcccagatttccgttggtgggagcagaggaag-------gtg-gagaactgctatgaa--atgcggggtgccaataaactcagtgcttctgaagatgtaaaaacttggagcggagaga-aagctgagaatgccaa-cccctggaacatgcag--agattttcagccagtcatcgagcttctcaacagaatgag---agaaggggCTAGTAAA------------TGCATATACTCAGTGAAATACA-TGAAAGCCAATTACATAAAAATACCTATCCTTGGGTGCAACTAGAAAGCCATTGCTTCTGCTAGCATGAGTCTGCATATGTGAGATGGATAAATCAGGCAATTGGAGATGTGAAGAGGCAGGAGGAAGGGTGGGGGT-GCTGACCACGGATGTAGAGAAAGGACCACAGAGAAAAGCTCtct-atctgtctgtctgtctgtctctctCAGCAGCTGCAGTG--ACACTGCCTCTCATGCAGTTAGAAATGCTGTCCTCAGAG i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C a score=196836.000000 s hg38.chr3_KI270781v1_alt 35428 92 + 113034 CATGAGAAGCTTCAAGAAGCACAGAGAGG--------TTTGCAGGATGGCAGACAAGACAGACTGCACACTGTTATTTGAAAATATCATTGGATGCACTC s panTro4.chr3 13785861 92 - 202329955 CATGAGAAGCTTCAAGAAGCACAGAGAGG--------TTTGCAGGATGGCAGACAAGACAGACTGCACACTGTTATTTGAAAATATCATTGAATGCACTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767405 92 - 202140232 CATGAGAAACTTCAAGAAGCACAGAGAGG--------TTTTCAGGATGGCAGACAAGACAGACTGCACACTGTTATTTGAAAATATCATTGGATGCACTC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103611708 92 + 192599291 CACGAGAAGCTTCAAGAAGCACAGAGAGG--------TTTGCGGGATGGCAGACAAGACAGGCTGCACACTGTTATTTGAAAATATCATTGGATGCACTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103251192 92 - 192460366 CATGAGAAGCTTCAAGAAGCACAGAGAGG--------TTTGCGGGATGGCAGACAAGACAGGCTGCACACTGTTATTTGAAAATATCATTGGATGCACTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101047692 92 + 187378091 CATGAGAAGCTTcaagaagcacagagagg--------tttgCGGGATGGCAGACAAGACAGGCTGCACactgttatttgaaaatatcattgGATGCACTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4913991 92 + 91754291 CATGAGAAGCTTCAAGAAGCACAGAGAGG--------TTTGCGGGATGGCAGACAAGACAGGCTGCACACTGTTATTTGAAAATATCATTGGATGCACTC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24772196 94 - 42124431 ACCAAAAAGCTATCAGAAGTATAGAGAGGTGTTTGCATTTGCAAGATAG-----AAGACAGGTTGCACTCTGTCATCTG-AAATGTCACCGGGCACCCCC i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14373123 74 - 123690457 I a score=24339.000000 s hg38.chr3_KI270781v1_alt 35520 14 + 113034 TAAAGAATCGGTGT s panTro4.chr3 13785953 14 - 202329955 TAAAGAATCGGTGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767497 14 - 202140232 TAAAGAAGCAGTGT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103611800 14 + 192599291 TAAAGAAGCAGTGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103251284 14 - 192460366 TAAAGAAGCAGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101047784 14 + 187378091 TAAAGAAGCAGTgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4914083 14 + 91754291 TAAAGAAGCAGTGT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24772290 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14373123 74 - 123690457 I a score=257050.000000 s hg38.chr3_KI270781v1_alt 35534 113 + 113034 Agaccaggcgcagtggctcacacctataatcccagcactttgggaggcagaggtgggcagatctcttgaggtcaggagtttgagaccagcctggacaatatggcaaaaccctg s panTro4.chr3 13785967 113 - 202329955 Agaccaggcacagtggctcacacctataatcccagcactttgggaggcagaggtgggcagatctcttgaggtcaggagtttgagaccagcctggacaatatggcaaaaccctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767511 113 - 202140232 Agaccaggcgcagtggctcacgcttataatcccagcactttgggaggtagaggtgggcagatctcttgaggtcaagagtttgagaccagcctggacaatatggcaaaacccta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373197 111 - 123690457 Tggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggggggtggatcac--aagatcaagagatcaagaccagcctggccaaaatggtgaaaccccg i nomLeu3.chr11 I 74 I 301 s rheMac3.chr2 103611814 113 + 192599291 Ggaccaggtgcagtggctcacgcctataatcccagcactttgggaggcagaggtgggcagatcacttggggtcaggagtttgagaccagcctgcacaatatggcaaaaccctg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103251298 113 - 192460366 Ggaccaggtgcagtggctcacgcctataatcccagcactttgggaggcagaggtgggcagatcacttggggtcaggagtttgagaccagcctgcacaatatggcaaaaccctg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101047798 113 + 187378091 ggaccaggcgcagtggctcacgcctataatcccagcactttgggaggcagaggtgggcagatcacttggggtcaggagtttgagaccagcctgcaaaatatggcaaaaccctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4914097 113 + 91754291 Ggaccaggcgcagtggctcacgcctataatcccagcactttgggaggcagaggtgggcagatcacttggggtcaggagtttgagagcagcctgcacaatatggcaaaatcctg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24772290 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C a score=350186.000000 s hg38.chr3_KI270781v1_alt 35647 179 + 113034 tctct--aaaa----------acatac----aaaaaaaaaaatagccaggtgtggtggcacagacctgtggtcccagctactcaggaggctgaggtgggaggatcacttgagcttgggaggtagaggctgcagtgagtcgtaatcatgccagtacactccagcctgggtgaaagagtgaga-ccctgactcaaaaa- s panTro4.chr3 13786080 181 - 202329955 tctct--aaaa----------acatacaaaaaaaaaaaaaaatagccaggtgtggtggcacagacctgtggtcccagctactcaggaggctgaggtgggaggatcgcttgagcttgggaggtagaggctgcagtgagtcgtaatcatgccagtacgctccagcctgggtgaaagagtgaga-ccctgactcaaa--- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767624 184 - 202140232 tctctaaaaaa----------acacacacacacacacacaaatagccaggtgtggtggcacagatctgtggtcccagctactcaggaggctgaggtgggaggatcgcttgagcttgggaggtagaggctgcagtgagtcctaatcatgccagtacactccagcctgggtgacagagtgaga-ccctgactcaaaa-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373609 173 - 123690457 tctca--aaaa----------aa--------aaaaaaaaaattagcttggcgtggtggtgtgcacctatagtcccagctacttggggggctgagacaagagagtcacttgaacccgggaggcagaggttgcagtgagctgagatctcgccactgtactgcagcct-ggtgacagagtaaga-ctctgtctcagaa-- i nomLeu3.chr11 I 301 C 0 s rheMac3.chr2 103611927 182 + 192599291 tctct--aaaa----------acacacacacacacacaaaa-tagccaagtgcggaggcacagacctgtggtcccagctactcagaaggctgaggtgagaggatcgcttgagcttgggaggtagaggctgcagtgagccataatcatgccactacactccagcctgggtgacagagtgaga-ccctgactcaaaa-a i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103251411 182 - 192460366 tctct--aaaa----------acacacacacacacacaaaa-tagccaagtgcggtggcacagacctgtggtcccagctactcagaaggctgaggtgagaggatcgcttgagcttgggaggtagaggctgcagtgagccataatcaagccactacactccagcctgggtgacagagtgaga-ccctgactcaaaa-a i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101047911 188 + 187378091 tctct--aaaa----acacacacacacacacacacacaaaa-tagccaagtgtggtggcatagacctgtggtcccagctactcagaaggctgaggtgagaggatcgcttgagtttgggaggtagaggctgcagtgagccataatcatgccactacactccagcctgggtgacagagtgaga-ccctgactcaaaa-a i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4914210 193 + 91754291 tctct--aaaaacacacacacacacacacacacacccaaaa-tagccaagtgtggtggcacagacctgcagtcccagctactcagaaggctgaggtgagaggatcacttgagcttgggaggtagaggctgcagtaagccataatcatgccactacactccagcctgggtgacagagtgagacccctgactcaaaa-a i chlSab2.chr15 C 0 I 424 e canFam3.chr34 24772290 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C a score=5507.000000 s hg38.chr3_KI270781v1_alt 35826 92 + 113034 taaataaataaataaataaa----taaataaataaa-------------------taaataaatgagagagagagagagaggaaggaaagaaggggg---ggagg-----gagggagggagga---------------------------------------------------------------------- s panTro4.chr3 13786261 82 - 202329955 -------------aaataaa----taaataaataaa-------------------tgaaagagagagagagagagagagcggaaggaaagaagggagggtggagg-----gagggagggagga---------------------------------------------------------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767808 52 - 202140232 -------------aaaaaaa----aaaataa------------------------------------aGAGAGAGaggaaggaaggaaagaagggag---ggagg-----gag-------------------------------------------------------------------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373782 26 - 123690457 -------------aaaaaaa------------------------------------------------------------------aaaaaaGAGAG---AGAGT-----TTT-------------------------------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103612109 113 + 192599291 -------------aaaaaaa-----aaagaaaGAGAGAGAGAGAG----------AGAGaggaagggaggaaggaaggaaggaaggaaggaagaagg---gaagg-----gatgggaagggaaagaagaggaga--------------------------------------------ggagaggagagaaga i rheMac3.chr2 C 0 I 14 s macFas5.chr2 103251593 124 - 192460366 -------------aaaaaaa----gagagagagagagagagagaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagaagg---gaagg-----gatgggaagggaaagaagaggaga--------------------------------------------ggagaggagagaaga i macFas5.chr2 C 0 I 14 s papAnu2.chr2 101048099 177 + 187378091 -------------aaaaaaaaagagagagagagagagagacagaggaaggaaggaaggaaggaaggaaagaaggaaggaaggaaggaaagaggaagg---gagggagggagggagggagggaaggaaggaaggaaggaagaaaggaaaggatgggaagggaaagaagagaagaggagaggagaggagagaaga i papAnu2.chr2 C 0 I 14 e chlSab2.chr15 4914403 424 + 91754291 I e canFam3.chr34 24772290 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C a score=68349.000000 s hg38.chr3_KI270781v1_alt 35918 50 + 113034 agaaagaaaagaaa-------------agaagggacaagacaaT-----TGGGTGCACTCTAAAGAAG s panTro4.chr3 13786343 63 - 202329955 agaaagaaaagaaaagaaaagaaaagGAGAAGAGACAAGACAAT-----TGGGTGCACTCTAAAGAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767860 45 - 202140232 -----gaaAGGAAA-------------AGAAGAGACAAGAAAAT-----TGGGTGCACTCTAAAGAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373808 50 - 123690457 -----TCCAAGGTG-------------ATCTGTAATTTGAAGATAGCCCTGAATATCACCTAAATAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103612236 50 + 192599291 agagaaaaaaagaa-------------aagagaGACAAGACAAT-----TGGATGCATTCTAAAGAAG i rheMac3.chr2 I 14 C 0 s macFas5.chr2 103251731 50 - 192460366 agagaaaaaaagaa-------------aagagagacaagacaaT-----TGGATGCATTCTAAAGAAG i macFas5.chr2 I 14 C 0 s papAnu2.chr2 101048290 50 + 187378091 agagaaaaaaagaa-------------aagagagacaagacAAT-----TGGATGCATTCTAAAGAAG i papAnu2.chr2 I 14 C 0 s chlSab2.chr15 4914827 49 + 91754291 agag-aaaaaagaa-------------aagagagacaagacaaT-----TGGATGCATTCTAAAGAAG i chlSab2.chr15 I 424 C 0 e canFam3.chr34 24772290 0 - 42124431 C e calJac3.chr15 92396154 0 - 98464013 C a score=591101.000000 s hg38.chr3_KI270781v1_alt 35968 259 + 113034 CAGTACACAAGAGCACAGAAAACAGGCCGTGGAGACTCTGGGACAAGGGGTTGATATTAGAGAAGGGGAGAAGGGAAAGGGATAAAGAAGGAGCCAA-----AAATCTGGC-CACTCACACTGGCAGGGCTTGGATGGGAGGGAAGACTCTGGATCTTAGAGGAAAACAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGAGGAAGAACCAACCCAGGGAGAGG-CCAGCACCTGTCTTTCT s panTro4.chr3 13786406 259 - 202329955 CAGTACACAAGAGCACAGAAAACAGGCCGTGGAGACTCTGGGACAAGGGGTTGATATTAGAGAAGGGGAGAAGGGAAAGGGATAAAGAAGGAGCCAA-----AAATCTGGC-CACTCACACTGGCAGGGCTTGGATGGGAGGGAAGACTCTGGATCTTAGAGGAAAACAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAGCCCCCAACTTCCCTCCCCAGAGGAGGAAGAACCGACCC-GGGAGAGG-CCAGCACCTGTCTTTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13767905 259 - 202140232 CAGCACACAAGAGCACAGAAAACAGGCCCTGGAGACTCTGGGACAAGGGGTTGATATTAGAGAAGGAGAGAAAGGAAAGGGATAAAGAAGGAGCCAA-----AAATCTGGC-AACTCACACTGGCAGGGCTTGGATGGGAGGGAAGACTCTGGATCTTAGAGGAAGAGAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGAGGAAGAACCAACCCAGGGAGAGG-CCAGCACCTGTCTTTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373858 258 - 123690457 CAATGTTCCCGAGCAGGAAAAACAGGCCCTGCAAGCTGGGTAGCAAGCAGTTAA-GTAAGAGAAGGGGAGTGTGGAAAGGAATGGGGAGCGGG-CAG-----AGGCCTGGTGGACCCATCCTGGAAAGGC--------------AGGCTCCAGATGTTGGAGGGCAAAAGATGCCTCGTTCTC--CTCTAGCAGCATCGCAGCTGGATCCAGACCAG-TTCCAGTTTGTCCTCCCAGAAGAGCAGGGGTCCATCTGGGGACAGGCCCAGCCCCTCTCCTTCT i nomLeu3.chr11 C 0 T 50755 s rheMac3.chr2 103612286 259 + 192599291 CAGTGTACAAGAGCACAGAAAACAGGCCTTTGAGATTCTGGGACAAGGGGTTAATATTAGAGAAGGGGAGAAAGGAAAGGGATAAAGAAGGAGCCAG-----GAATCTGGC-AACTCACACCGGCAGGGCTTGGATGGGAGGGAAGACTCTGGATCTTACAGGAAGAGAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGTGGAAGAACCAACCCAGGGAGAGG-CCAGCATCTGTCTTTCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103251781 257 - 192460366 CAGTGTACAAGAGCACAGAAAACAGGCCTTTGAGATTCTGGGACAAGGGGTTAATATTAGAGAAGGGGAGAAAGGAAAGGGATAAAGAAGGAGCCAG-----GAATCTGGC-AACTCACACCGGCAGGGCTTGGATGGGAGGGAAGA--CTGCATCTTACAGGAAGAGAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGTGGAAGAACCAACCCAGGGAGAGG-CCAGCATCTGTCTTTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101048340 259 + 187378091 CAGTGTACAAGAGCACAGAAAACAGGCCTTTGAGATTCTGGGACAAGGGGTTAATATtagagaaggggagaaaggaaagggataAAGAAGGAGCCAG-----GAATCTGGC-AACTCACACCGGCAGGGCTTGGATGGGAGGGAAGACTCTGGGTCTTACAGGAAGAGAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGTGGAAGAACCAACCCAGGGAGAGG-CCAGCACCTGTCTTTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4914876 259 + 91754291 CAGTGTACAAGAGCACAGAAAACAGGCCTTTGAGATTCTGAGACAAGGGGTTAATATTAGAGAAGGGGAGAAAGGAAAGGGATAAAGAAGGAGCCAG-----GAATCTGGC-AACTCACACCGGCAGGGCTGGGATGGGAGGGAAGACTCTGGATCTTAGAGGAAGAGAAATGTGTC-----T--CTCAA--------GCAGCTGGAACCAGGCCAG-CCCCAACTTTCCTCCCCAGAGGTGGAAGAACCAACCCAGGGAGGGG-CCAACACCTGTCTTTCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24772290 258 - 42124431 CAGTGTGTAGCAGCATGGGAAATCGGCCCTGGAAA--CCAGGACGAGAGCTTGA-GGCAGAGAAGG-GAGCGAGGAAAGAGATGAAAGTGGGTCTAGGGCTAGAGTCAGGC-AGCTCACACTGTTAGGGCTTGGAGGGGA-GGAACACTCTGGATC-TAGAGGAAGAGAAATGTGTT-----TTCCTGCA--------GCAGCTGGAACCAGGCCAG-CCCCAGCTT-CCTTCCCAGCAAAGCAAGAACCAGCCTACGGAGAAG-CCAGCACCTTTCCTCT- i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C a score=769658.000000 s hg38.chr3_KI270781v1_alt 36227 370 + 113034 CTCCCCACCCCAAAAAGCCCTGAAGcagagccagatatacc--ggaactaattaagtttaagcttcaaggcccttcaccttac-tcatcctgtccaaggccctgggagaggctttagcaaggtgttcgcatgatccgcatatcactgagaatttgcaaatgtactatttttgtgtattcttttttcctaaagagggtcctttaaattgtgtaagcattcggcctcacaaagcctggctctgcccTCACCCTGGAGGCTTACCACAGATATA-CTTCAGGATGCTTTATGATAAACACATCCCTTCACCTGTT--CATGGAACATTCTTTGTTAGAGAAT---------CCTTCCTTCTTCAACTTGAAAACAAGATACTTATAAC s panTro4.chr3 13786665 368 - 202329955 CTCCCCACCCCAAAAAGCCCTGAAGcagagccagatatacc--ggaactaattaagtttaagcttcaaggcccttcaccttac-tcatcctgtccaaggccctgggagaggctttagcaaggtgttcgcatgatccgcatatcactgagaatttgcaaatgtactatttttgtgtattcttttt--ctaaagagggtcctttaaattgtgtaagcattcggcctcacaaagcctggctctgccccCACCCTGGAGGCTTACCGCAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTTCACCTGTT--CATGGAACATTCTTTGTTAGAGAAT---------CCTTCCTTCTTCAACTTGAAAACAAGATGCTTATAAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13768164 370 - 202140232 GTCCCCACCCCAAAAAGCCCTGAAGcagagccagatatacc--ggaactaattaagtttaagcttcaaggcccttcacctttc-tcatcctgtccaaggccctgggagaggcgttagcaaggtgttcgcatgacccgcatatcactgaaaatttgcaaatgtactatttttgtgtattcttttttcctaaagagggtcctctaaattgtataagcattaggccccacaaagcctggctctgcccTCACCCTGGAGGCTTACCACAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTTCACCTGTT--TGTGGAACATTCTTTGTTAGAGAAT---------CCTTCCTTCTTCAACTTGGAAACAAGATGCTTATAAT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103612545 369 + 192599291 GTCCCCACCCCAAAAAGCCCCGAAGcagagtcagatatacc--ggaactaattaagtttaagcttcaaggcccttcaccttac-tcgtcctgcccaaggccctggaagaggctttagcaaggtgttcgcatggt-cacctatcactgaaaatttgcaaatgtactatttttgtgtattattttttcctaaagagagtcctctaaattgtataagcattaggccccacaaagcctggctctgcccTCACCCTGGAGGCTTACCACAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTCTACCTGTT--CGTGGAACATTCTTTCTTAGAGAAT---------CCTTCCTTCTTCAACTTGGAAACAAGATGCTTATAAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103252038 369 - 192460366 GTCCCCACCCCAAAAAGCCCCGAAGcagagtcagatatacc--ggaactaattaagtttaagcttcaaggcccttcaccttac-tcgtcctgcccaaggccctggaagaggctttagcaaggtgttcgcatggt-cacctatcactgaaaatttgcaaatgtactatttttgtgtattattttttcctaaagagagtcctctaaattgtataagcattaggccccacaaagcctggctctgcccTCACCCTGGAGGCTTACCACAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTCTACCTGTT--CGTGGAACATTCTTTCTTAGAGAAT---------CCTTCCTTCTTCAACTTGGAAACAAGATGCTTATAAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101048599 368 + 187378091 GTCCCCACCTCAAAAAGCCCTGAAGCAGAGTCAGATATACC--GGAACCAATTAAGTTTAAGCTTCAAGGCCCTTCACCTTAC-TCGTCCTGCCCAAGGCCCTGGAAGAGGCTTTAGCAAGGTGTTCGCATGGT-CACCTATCACTGAAAATTTGCAAATGTACtatttttgtgtattcttttttccTAAAGAGAGTCCTCTAAATTGTATAAGCATTAGGCCCCACAAAGCCTGGCTCTGCCCTCACCCTGGAGGCTTACCACAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTCTACCTGTT--TGTGGAACATTCTTTCTTAGAGAAT---------CCTTCCTTCTTCAAC-TGGAAACAAGATGCTTATAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4915135 356 + 91754291 GTCCCCACCCCAAAAAGCCCTGAAGcagagtcagatatact--ggaactaattaagtttaagcttcaaggcccttcaccttac-tcgtcctgcccgaggccctggaagaggctttagcaaggtgttcgcatgat-cacctatcactgaaaatttgcaaatgtactatttttgtg-------------taaagagagtcctctaaattgtataagcattaggccccacaaagcctggctctgcccTCACCCTGGAGGCTTACCACAGATGTA-CTTCAGGATGCTTTATGATAAACACATCCCTCTACCTGTT--TGTGGAATATTCTTTCTTAGAGAAT---------CCTTCCTTCTTCAACTTGGAAACAAGATGCTTATAAT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24772548 381 - 42124431 GTCCCCACCCTAAAAAGCACAGAAGcagagccagatttgccctgaagcggctaaagctccagctctaggtcc--tcattccacatctccaaatgcaaagccctgggaggggccacagcaaggtgctcataggat-cacatatcatggaaaccttgcaaaagcaagatatttctgcattcttttttcc-aaagagggacctcctaccggtataaactttaggctcccccaaaactggctttgcctcCACCCTGAAGGGTTAACACAGTTTTATTTTTAAGATGCCTTATGATAAATACATCCCCTGGCCTGTTGGAGTGGAACATTCCTTATTTGAGGATAATGGTAAGACTCTCTCCTTCAACTTGGAAATAAGAAGCTTAAAAC i canFam3.chr34 C 0 I 582 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T a score=583146.000000 s hg38.chr3_KI270781v1_alt 36597 310 + 113034 GTTAATGACC-----TCAAACACTGGCTGAAAATCAACGGCTATAGTATAATCCCTCTGACAAAAAAT------GTGAATAAGTGTTATATGATCCTAGGTCTGAATTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGGAAAGGT-GGGAGTGAGGTAAAGAGGTTAGTCCTGCATACACTCACTTGTGC-TGTTGTGGGGAGAATTTTTG-TCTGCACATCTGGCCCTTGCCC-AGtgtattagggtttttcagagaaacaaaaccaacaggatgtgtagatagatgaatggatgagtagatagacaacagggatttta s panTro4.chr3 13787033 306 - 202329955 GTTAATGACC-----TCAAACACTGGCTGAAAATCAACGGCTATAGTATAATCCCTCTGACAACAAAT------GTAAATAAGTGTTATCTGATCCTAGGTCTGAATTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGAAAAGGT-GGGAGTGAGGTAAAGAGGTTAGTCCTGCATACACTCACTTGTGC-TGTTGTGGGGAGAATTTTTG-TCTGCACATCTGGCCCTTGCCC-AGtgtattaggg-ttttcagagaaacaaa--ccataggatgtgtagatagatG-ATGGATGAGTAGATAGATAACAGGGATTTTA i panTro4.chr3 C 0 I 92 s ponAbe2.chr3 13768534 311 - 202140232 GTTAATGACCTCTTTTCAAA----GGCTGAAAATCAACTGCTATATTATAATCCCTCTGACAA-AAAT------GTAAATGAGTGTTATCTGATCCTAGTTCTGAATTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGATAAGGT-GGGACTGAGGTACAGAGGTTAGTCCTGCATACATTCACTTGTGC-TGTTGCAGGGAGAATTTTTG-TCTGCACATCTGGCCCTTGCCCTAGtgtattagggtttttcagagaaacaaaaccaagaggatgtgtagatagacgaatggatgagtagacagataacagggattttt i ponAbe2.chr3 C 0 I 1 s rheMac3.chr2 103612914 311 + 192599291 GTTAATGACA-----TCATACACTGGCTGAAAATCACCTGCTATAGTGTAATCCCTCGGACAACAAAT------GTAAATGCGTGTTATCTGATTCTAGGTCTGAACTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGAAAAGTT-GGGAGTCAGGTACAGAGGTTAGTCCTGCACATATTCACTTGTGCTTGTTGGGGGGAGAATTTTTG-TCTGCATATCTGGACCTTGCCC-AAtgtattagggtttttcagagaaacaaaaccaataggatgtgtagatagatgaatggatgagtagagagataatagggatttta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103252407 311 - 192460366 GTTAATGACA-----TCATACACTGGCTGAAAATCACCTGCTATAGTGTAATCCCTCGGACAACAAAT------GTAAATGCGTGTTATCTGATTCTAGGTCTGAACTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGAAAAGTT-GGGAGTCAGGTACAGAGGTTAGTCCTGCACATATTCACTTGTGCTTGTTGGGGGGAGAATTTTTG-TCTGCACATCTGGACCTTGCCC-AAtgtattagggtttttcagagaaacaaaaccaataggatgtgtagatagatgaatggatgagtagagagataatagggatttta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101048967 310 + 187378091 GTTAATGACA-----TCATACACTGGCTGAAAATCACCTGCTATAGTGTAATCCCTCGGACAACAAAT------GTAAATGCGTGTTATCTGATTCTAGGTCTGAACTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGAAAAGTT-GGGAGTCAGGTACAGAGGTTAGTCCTGCACATATTCACTTGTGCTTGTTGGGGGGAGAATTTTTG-TCTGCACATCTGGACCTTGCCC-AGTGTATTAGGgtttttcagagaaacaaaaccaataggatgtgtagatagatgaatggatgagtagAGAGATAATAGGGA-TTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4915491 310 + 91754291 GTTAATGACA-----TCATACACTGGCTGAAAATCACCTGCTATAGTGTAATCCCTCGGACAACAAAT------GTAAATGCGTGTTATCTGATTCTAGGTCTGAACTGATAAAGAGGAATTAGAGTTGCAGAAGA-------CTAGAGGAAAAGTT-GGGAGTCCGGTACAGAGGTTAGTCCTGCACATATTCACTTGTGCTTGTT-GGGGGAGAATTTTTG-TCTGCACGTCTGGACCTTGCCC-AGtgtattagggtttttcagggaaacaaaaccaataggatgtgtagatagatgaatggatgagtagagagataatagggatttta i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24773511 283 - 42124431 TCTAATGACA-----TCACCAACTAGCTGAAAACCACCGGCTAAAGTATAATCCATCAGTCAACAAATCCCTCAGTGA---CCTGTTATCAGATGCTGGGCCTGACTTAATAAAGAGGAATCTGATGTGTGGAGGATTGGTGGCTAGGGGGAAAGGTGGGGAGTGATTTACAGAGGTGTTTCTTGTTTATCTTGGTCTGTGC-TATGCAGGGGAG--TTTTTGTTCTGCACATCTGGCCTTTGTCC-AGGGTAttagggttttccagagaaacagaagcaatagga--tgcagatag----------------------------------- i canFam3.chr34 I 582 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T a score=280870.000000 s hg38.chr3_KI270781v1_alt 36907 194 + 113034 aggggcaggctcatgcaattgctggtagttaataggg-atcttaaggaaccatctcatgcgattgttggggctggcaagtccaaaatctgcagggcaggccagcggatgggagaacagtgaaggg---tgatgttgcagtcttgagtctgaaggcagtctggaggcagaatcccttcttccttaggagacct--tatctt s ponAbe2.chr3 13768846 194 - 202140232 aggggcaggctcatgcaattgctgggagttaataggg-atcttaaggaaccatctcatgtgattgttggggctggcaagtccaaaatatacagggcaggccagctggtgggagaacagtgaaggg---tgatgttgcagtcttgagtttgaaggcagtctggaggcagaatcccttcttccttaggagacct--aatctt i ponAbe2.chr3 I 1 C 0 s rheMac3.chr2 103613225 194 + 192599291 aggggcaggctcatgcaattgttgggagttaataggg-attttaaggaaccatctcatgcgattgttggggctggcaagtctaaaatctgcagggcaggccagtgggtgggagaacagtgaaggg---tgatgttgcagtcttgagtctgaaggcagtctggaggcagaatcccttcttccttaggagacct--aatcta i rheMac3.chr2 C 0 I 289 s macFas5.chr2 103252718 194 - 192460366 aggggcaggctcatgcaattgttgggagttaataggg-attttaaggaaccatctcatgcgattgttggggctggcaagtctgaaatctgcagggcaggccagtgggtgggagaacagtgaaggg---tgatgttgcagtcttgagtctgaaggcagtctggaggcagaatcccttcttccttaggagacct--aatcta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049277 195 + 187378091 AGGGGCAGGCTCATGCAATTGTTGGGAGTTAATAGGGAATTTTAAGGAACCATCTCATGTGATTGTTGGGGctagcaagtccaaaatctgcagggcaggCCAGCGGGTGGGAGAACAGTGAAGGG---TGATGTTGCAGTATTGAGTCTGAAGGTAGTCTGGAGGCAGAATCCCTTCTTCCTTAGGAGACCT--AATCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4915801 194 + 91754291 aggggtaggctcatgcaattgttgggAGATAATAGGG-attttaaggaaccatctcatgcgattgttggggctggcaagtccaaaatctgcagggcaggccagcgggcgggagaacagtgaaggg---tgatgttgcagtcttgagtctgaaggtagtctggaggcagaatcccttcttccttaggagacct--aatcta i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24773794 145 - 42124431 -------------------------------atagaa-attttaaggaattggcttaggagatagtgagggctagcaagtccaaaat-----aggcaggccc-------agagaccagggaagagttttaatgttgccatcttgagtctga-----------aggcagaattccttcctgcctggagcacctccggcttg i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=285094.000000 s hg38.chr3_KI270781v1_alt 37101 178 + 113034 ttctctaaggccttcaactgactgcatgagacccatgcacattatagagggtaataggcttactcaaagtctactgatttaaacattaattataacccaaaaatacctttatg--gcaacatctagactgatgtttcaccaaacaattgggtgccagagcctagacaagttgacacataa s ponAbe2.chr3 13769040 178 - 202140232 ttctctgaggccttcaactgactgcatgagatccatgcacattatggagggtaataggcttactcaaagtctactgattcaaatgttaattataccccaaaaatatctttatg--gcaacatctagactgatgtttcaccaaacaattgggtgccagagcctagacaagttgacacataa i ponAbe2.chr3 C 0 I 27 s rheMac3.chr2 103613708 178 + 192599291 ttctctaaggccttcaactgactgcacgagacccagacacattatagaagataataggcttactcaaaatctactgatttaaatgttaattgtaccccaaaaatacctttaca--gcaacatctagactgatgtttcaccaaacaattgggtgccagagcctatacaagttgacacataa i rheMac3.chr2 I 289 C 0 s macFas5.chr2 103252912 178 - 192460366 ttctctaaggccttcaactgactgcacgagacccagacacattatagaagataataggcttactcaaaatctactgatttaaatgttaattgtaccccaaaaatacctttaca--gcaacatctagactgatgtttcaccaaacaattgggtgccagagcctatacaagttgacacataa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049472 178 + 187378091 TTCTctaaggccttcaactgactgCACGAGACCCAGACACATTATAGAAGATAATAGGCTTACTCAaaatctactgatttaaatgttaattgtaCCCCAAAAATACCTTTACA--GCAACATTTAGACTGATGTTTCACCAAACAATTGGGTGCCAGAGCCTAtacaagttgacacataa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4915995 178 + 91754291 ttctctaaggccttcaactgactgcacgagacccagacacactatagaagataataggcttactcaaaatctactgatttaaatgttaattgtaccccaaaaatacctttaca--gcaacatctagactgatgtttcaccaaacaattgggtgccagagcctatacaagttgacacataa i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24773939 174 - 42124431 tcttctaaggccttcaattgattaaatgaggcccatccatgttatggagagt-----gcttactcaaaatctacggatttaaatgttaatcacatctaaaaagtgctggcacaaggcaacatctaaaccagtgtttgactgaacaactgaatgccaaagcctagccaaatt-acacataa i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=28295.000000 s hg38.chr3_KI270781v1_alt 37279 24 + 113034 aattatccttcataTCCTGCATAT s rheMac3.chr2 103613886 24 + 192599291 aattaaccttcataCCCTGCATAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103253090 24 - 192460366 aattaaccttcataCCCTGCATAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049650 24 + 187378091 aattaaccttcaTACCCTGCATAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916173 24 + 91754291 aattaaccttcataCCCTGCATAT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24774113 24 - 42124431 aattaaccatcataCTCAGCATAG i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13769218 27 - 202140232 I e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=48797.000000 s hg38.chr3_KI270781v1_alt 37303 32 + 113034 TGGAGTATGACCACTCCGGCATGATTTCCATC s ponAbe2.chr3 13769245 32 - 202140232 TGGAGTATGACCACGCTGGCATGATTTCCATC i ponAbe2.chr3 I 27 M 2612 s rheMac3.chr2 103613910 32 + 192599291 GGGAGTATGACCACTCCAGCATGATTTCCATC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103253114 32 - 192460366 GGGAGTATGACCACTCCAGCATGATTTCCATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049674 32 + 187378091 TGGAGTATGACCACTCCAGCATGATTTCCATC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916197 32 + 91754291 TGGAGTATGACCACTCCGGCATGATTTCCATC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24774137 32 - 42124431 GGGAACATGGCCACTTAAACATAATTTATGCC i canFam3.chr34 C 0 C 0 e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=113040.000000 s hg38.chr3_KI270781v1_alt 37335 118 + 113034 AATTGTATTTGTCGTGATTTTTGGAGCCCTTCCataataataataataattcatttttacttatttatttatttttgagatggagtctca------ctccatcacccaggctggagtgcagtgg s rheMac3.chr2 103613942 118 + 192599291 AATTGTATTTGTTATGATTTTTGGAGCCCTTCCAAAATAATAATAATAATTCATTTTTATGTAtttatttatttttgagatggagtcttg------ctgcatcacccaggctggagtgcagtgg i rheMac3.chr2 C 0 I 519 s macFas5.chr2 103253146 118 - 192460366 AATTGTATTTGTTATGATTTTTGGAGCCCTTCCAAAATAATAATAATAATTCAtttttatgtatttatttatttttgagatggagtcttg------ctgcatcacccaggctggagtgcagtgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049706 118 + 187378091 AATTgtatttgttatgatttttgGAGCccttccaaaataataataataattcatttttatgtatttatttatttttgagatggagtcttg------ctgcatcacccagactggagtgcagtgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916229 118 + 91754291 AATTGTATTTGTTATGATTTTTGGAGCCCTTCCAAAATAATAATAATAATTCAtttttatgtatttatttatttttgagatggagtcttg------ctgcatcacccaggctggagtgcagtgg i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24774169 100 - 42124431 AGCTGTGTTTGTCATGA-CTTTGGAGAACTTCCAAAATAATAAC-----------------------TTTATTATTTTAAAAGAACATCAgggcacctgcgtggctcaggcagttaagcacctg i canFam3.chr34 C 0 I 3 e ponAbe2.chr3 13769277 2612 - 202140232 M e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=121087.000000 s hg38.chr3_KI270781v1_alt 37453 239 + 113034 caagatctgggctca--ccacaacctctgcttcccgcgttcaagcgattctcctgcctcagcctcctgagtagctggaattataggcacccaccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacgtcagcctcccaaagtgctgggatta---catgtgtgaaccaccgtgcccggc s macFas5.chr2 103253264 239 - 192460366 tgagatctgggttca--ccataacctctgcctcccaggttcaagcgattctccagcctcagcctcccgagtagctgggattacaggcacccaccaccatacccggctaatttttgtagttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcagatgatccacccacctcggcctcccaaagtgctgggatta---caggtgtgagccaccgtgcccagc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101049824 239 + 187378091 tgagatctgggttca--ccacaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccatacccggctaatttttgtagttttaatagagacagggtttcaccatgttggacaggctggtctcaaactcctgacctcagatgatccacccacctcagcctcccaaagtgctgggatta---caggtgtgagctaccgtgcccagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916347 239 + 91754291 tgagatctgggttca--ccacaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccatacccggctaatttttgtagttttaatagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcagatgatccacccacctcggcctcccaaagtgctgggatta---caggtgtgagccaccatgcccagc i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24774272 182 - 42124431 cttgatttcagctcaggtcatgatctcagggttgtgaggtcgagc------cccatgtcaggct-------------------------------ccatgcccagcttaagattctctct-----------gggg---cacctgggtggctcagtgg---ttgagcatctgcctttgg--------ctctggttgtgatcccagggtcctgggattgagtcctgcatggggctcccctccctgc i canFam3.chr34 I 3 I 301 e ponAbe2.chr3 13769277 2612 - 202140232 M e rheMac3.chr2 103614060 519 + 192599291 I e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=140973.000000 s hg38.chr3_KI270781v1_alt 37692 303 + 113034 cAATAACTTCACTTTAAAGGAACTTAAggccaggcatggtggctcatgcttgtaattccagcactatgggaggcagaggcttgtagatcaagaggtcaggagttcaagatcagcctggccaagaaggtaaaatcccatctctactaaaaatacaaaaaaaaaaaaaaaaaaaaggcccagtgtggtggcaggtgcctgtaat-----cccagctactcgggaggctgaggcagaaccctggaggcggaggttgcagtaagccgagattgctgcactccagcctgggcaacagagcgagactctgtctc s macFas5.chr2 103253503 299 - 192460366 cAATAACTTCACTTTAAAGGAATTTAAggccagacacgctggctcacgcttgtaattccagcattttggaaggccgaggcgggtggatcacgatgtcaggagttcaagaccagcctggccaaggtagtaaaaccctgtctctactaaaaatatatat----atatatataaaaagccaggtgtggtggcaggtgcctgtaat-----cacaactacttgggaggctgaggcagaaccctggaggtggagattacagtgagccaagatcactgccctccagcctgggtgacagagtgagactctgtctc i macFas5.chr2 C 0 I 10 s papAnu2.chr2 101050063 301 + 187378091 caataactTCACTTTAAAGGAATTTAAGGCCAGACACgctggctcacgcttgtaattccagcattttgggaggccgaggcgggtggatcacgatgtcaggagttcaagaccagcctggccagggtagtaaaaccctgtctctactaaaaatgtatat-------taaaaaaaaagccaggtgtggtggcaggtgcctgtaatcacaacacaactacttgggaggctgaggcagaaccctggaggtggagattacagtgagccaagatcactgccctccagcctgggtgacagagtgagactctgtctc i papAnu2.chr2 C 0 I 8 s chlSab2.chr15 4916586 298 + 91754291 cAATAACTTCACTTTAAAGGAATTTAAggccagacatgctggctcacgcttgtaattccagcattttgggaggccaaggcgggtggatcacgacgtcaggagttcaagaccagcctggccaaggtagtaaaactctgtctctactaaaaatatatat----atatata-aaaaagccaggtgtggtggcaggtgcctgtgat-----cacaactacttgggaggctgaggcagaaccctggaggtggagattacagtgagccaagatcactgccctccagcctgggtgacagagtgagactctgtctc i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e rheMac3.chr2 103614060 519 + 192599291 I e canFam3.chr34 24774454 301 - 42124431 I e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=310.000000 s hg38.chr3_KI270781v1_alt 37995 1 + 113034 -----a s rheMac3.chr2 103614579 1 + 192599291 -----a i rheMac3.chr2 I 519 C 0 s macFas5.chr2 103253812 1 - 192460366 -----a i macFas5.chr2 I 10 C 0 s papAnu2.chr2 101050372 1 + 187378091 -----a i papAnu2.chr2 I 8 C 0 s chlSab2.chr15 4916884 6 + 91754291 acaaaa i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e canFam3.chr34 24774454 301 - 42124431 I e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=19120.000000 s hg38.chr3_KI270781v1_alt 37996 21 + 113034 aaaaaaaaaaaaaaaaaaGGG s rheMac3.chr2 103614580 21 + 192599291 aaaaaaagaaaaaaaaaaagG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103253813 21 - 192460366 aaaaaagaaaaaaaaaaaaGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101050373 21 + 187378091 aaaagaaaaaaaaaaaaaagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916890 21 + 91754291 agaaaagaaaagaaaaaaaGG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24774755 21 - 42124431 aaataaataaataaataaaca i canFam3.chr34 I 301 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e calJac3.chr15 92396154 0 - 98464013 C e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=170037.000000 s hg38.chr3_KI270781v1_alt 38017 123 + 113034 AATTTAATCACTATAAGTTCTAACTGCAGT-----TCTGACTGTATAATACTATATGGACCTCTTCCCTTACATATTCTCCCTAGTGCGAGAGAGAGTGCTGGGTGTGCAGGTAAGTGA----------------CACTTACTT s rheMac3.chr2 103614601 119 + 192599291 AATTTAATCACTATAGGTTCTAATTGCAGT-----TCTGACTGTATAATACCATATAGACCTCTTCCCTTACATATTCTCCCTAGTGGGAGAGAGAGTGCTGGGTGTGCAGGTAAGTGA--------------------tattt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103253834 119 - 192460366 AATTTAATCACTATAGGTTCTAATTGCAGT-----TCTGACTGTATAATACTATATAGACCTCTTCCCTTACATATTCTCCCTAGTGGGAGAGAGAGTGCTGGGTGTGCAGGTAAGTGA--------------------TAttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101050394 138 + 187378091 aatttaatcACTATAGGTTCTAATTGCAGT-----TCTGACTGTATAATACTATATGGACCT-TTCCCTTACATATTCTCCCTAGTGGGAGAGAGAGTGCTGGGTGTGCAGGtaagtgatatttatttatttatttatttattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4916911 139 + 91754291 AATTTAATCACTATAGGTTCTAATTGCAGT-----TCTGACTGTATAATACTATATGGACCTCTTCCCTTACATATTCTCCCTAGTGGGAGAGAGAGTGCTGGGTGTGCAGGTAAGTGAtatttatttatttatttatttattt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92396154 119 - 98464013 AGCTTAATCACTCTAGGTTGTAACTGCAGT-----TCTGACTGTATAACTCTGT----GCTTCTCCCCTTACATATACTCCCTAGTGGGAGAGAGAGTGCTGGGTATGCAGGTAAATGA----------------CACttattt i calJac3.chr15 C 0 I 1213 s canFam3.chr34 24774776 126 - 42124431 aaCTTCATCATTATAAGTTCTGATTGCAGTGTGACTATGACTATCTAGTGTTATATGGCCTCCTTCTCTTCCTTGTTCTCTCTA--GAGAAAGGCAGTGATGGGTATACAAGTAAGTGA----------------TGCTTATTT i canFam3.chr34 C 0 I 988 e ponAbe2.chr3 13769277 2612 - 202140232 M e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=269478.000000 s hg38.chr3_KI270781v1_alt 38140 316 + 113034 ACTTAtttatttatttttgagatggagtttcactcatgttgcccaggctggagtgcaatggtgcgatcttggctcaccgtaacctctgcctcctgggttcaagcgattcttctgcctcagcctcctgagtagctgggattacaggcatgcaccaccatgcctggctaattttatatttttagtagaaatggggtttctccatattggccagactggtcccgacgtcttgacctcaggtgatctgccagcctcagcctcccagcatgctgtaattacaggcgtgagccaccacgcccggccAGTGACACTTATTTTT s rheMac3.chr2 103614720 315 + 192599291 atttatttatttatttttgagatggagtttcgctcatgttgcccaggctagagtgcaatggcacgatctcagctcaccataacctctgtct-ctgggttcaagcaattcttctgcctcagcctcccaagtaggtggtattacaggcatgtgccaccatgaccagttaattttatatttttagtagagatggggtttcaccacgctggccaggctggtcttgaactcctgacctcagctgatcccccagcctcggcctcccaacatgctgggattacaggcaggagccaccatgcccagccAGTGACACttattttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103253953 315 - 192460366 atttatttatttatttttgagatggagtttcgctcatgttgcccaggctagagtgcaatggcacgatctcagctcaccataacctctgtct-ctgggttcaagcaattcttctgcctcagcctcccaagtaggtgggattacaggcatgtgccaccatgaccagttaattttatatttttagtagagatggggtttcaccacgctggccagactggtcttgaactcctgacctcagctgatccaccagcctcggcctcccaacatgctgggattacaggcatgagccaccatgcccagccAGTGACACTTATTTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101050532 315 + 187378091 atttatttatttattttcgagatggagtttcgctcatgttgcccaggctagagtgcaatggcacgatctcagctcaccgtaacctctgcct-ccgggttcaagcaattcttctgcctcagcctcccaagtaggtgggattacaggcatgtgccaccatgaccagttaattttatatttttagtagagatggggtttcaccacgttggccagactggtcttgaactcctgacctcagctgatccaccagcctcggcctcccaacatgctgggattacaggcgtgagccaccatgcccagccagtgacacttattttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4917050 315 + 91754291 atttatttatttatttTCAagatggagtttcgctcgtgttgcctaggctagagtgcaatggcacgatctcagctcaccgtaacctctgcct-ctgggttcaagcaattcttctgcctcagcctcccaagtaggtgggattacaggcatgtgccaccatgaccagttaattttatatttttagtagagatggggtttcaccacgttggccagactggtcttgaactcctgacctcagttgatccaccagcctcggcctcccaacatgctgggattacaggcatgagccaccatgcccagccAGTGACACTTATTTTT i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e canFam3.chr34 24774902 988 - 42124431 I e calJac3.chr15 92396273 1213 - 98464013 I e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=27060.000000 s hg38.chr3_KI270781v1_alt 38456 23 + 113034 AAAGATTAAAA-------------AATAATATTTAG s rheMac3.chr2 103615035 23 + 192599291 aaagattaaaa-------------aataatatttaG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103254268 23 - 192460366 AAAGATTAAAA-------------AATAATATTTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101050847 23 + 187378091 aaagattaaaa-------------aataatatttag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4917365 23 + 91754291 AAAGATTAAAA-------------AATAATATTTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92397486 36 - 98464013 aaaaaTTAAaataataataataataataataTTTAG i calJac3.chr15 I 1213 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e canFam3.chr34 24774902 988 - 42124431 I e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=283396.000000 s hg38.chr3_KI270781v1_alt 38479 202 + 113034 AGgccaacagcct-caaccagggcatacatgaagcctttccc-ttttttccactataaagctttcccactcctctacctgctttggattctctgtcaaaacacaagtgatggtggccaactcccttgctatagca------agctctgaatcaatcgtctttgcttgttctcatttggttgatcttcatttatttc----caGCAATTCAATTC s rheMac3.chr2 103615058 203 + 192599291 AGgctaacagcct-caatcagggcatacgtgaagccttctcctttttttccactataaaactttcccactcctctacctgccttggattctctgtcaaaacataagtgatggtggccaactcccttgctatagca------agctctgaatcagtcgcctttgtttgttctcatttggttgatcttcatttatttc----caGCAATTCAATTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103254291 203 - 192460366 AGgctaacagcct-caatcagggcatacgtgaagccttctcctttttttccactataaaactttcccagtcctctacctgccttggattctctgtcaaaacataagtgatggtggccaactcccttgctatagca------agctctgaatcagtcgcctttgtttgttctcatttggttgatcttcatttatttc----caGCAATTCAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101050870 202 + 187378091 aggCTAACAGCCT-CAATCAGGGCATACGTGAAGCCTTCCCCtttttttCCACTATAAAGCTTTCCCACTCCTCTACCTGCCTTGGATTCTCTGTCAAAACATAAGTGATGGTGGCCAACTCCCTTGCT-TAGCA------AGCTCTGAATCAGTCGCCTTTGTTTGTTCTCATTTGGTtgatcttcatttatttc----cagcAATTCAATTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4917388 203 + 91754291 AGgctaacagcct-caatcagggcataagtgaagccttcccctttttttccactataaagctttcccactccactacctgccttgaattctctgtcaaaacataagtgatggtggccaactcccttgctatatca------agctctgaatcagtcgcctttgtttgttctcatttggttgatcttcatttatttc----caGCAATTCAATTC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92397522 200 - 98464013 CATccaacagcct-cactcagggtgtacatggagcctttcc--tttttcccactatgaag-ttctccactcctctgtctgcctgggattctctatcaaaacacaagtgatggtggctgcctcccttgctacagaa------agctccaaatctgtcacctttgcttgttctcatttggttggtcttcatttgtttc----caGTAATTCAGTTC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24775890 183 - 42124431 aggccaacagcctccaatcagggcatatctgaagcctcccc--ttcttgccaccatgaagttttcccactc---------------gctgactggcaaaaagtaaatgatgatggctgactcccttgctacagcaaaccagagttttgaatacataacctctgc--------------ttggtcttcctttatttccacaCATTCATTCAATTC i canFam3.chr34 I 988 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e nomLeu3.chr11 14374116 50755 - 123690457 T e panTro4.chr3 13787339 92 - 202329955 I a score=2457490.000000 s hg38.chr3_KI270781v1_alt 38681 1269 + 113034 TTCCCTTTATTCATCTAAGTAGGTATTCaatatttattaagcatctattatatgccagactccatgctag----gccctgagaataatgaagtgacccagatgctagggtccctgactttaggctgattatagtccagtgggaggagaaaggcaaataaacagtaagccgagcgcagtatgaaaagggctgtgacgagggccagctaa-ccagacttggaagtcagggaacatatctgagaaaagtgatg--tttccacaggggcctgaagcatgagtatggccagaccaagtggagaaaaact-ggggga---------gagggaaAGAAAGGGCCACAAGCAGGTTGC-CAGACCACAGAGAGCATGAACATTCAAGGATGTGAACAAAAGCGAGATGGCTGAA-CTTGGTGTTTGAGCTGGGAGTGGTG--CCA------CGGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATCCTGAAG-------TAATTATCAAATACCCATTTTGGAATATG--------GCTTCATGTGGAATGAGGCC---AGAAGCAGA------------------------GCAAACCTGGAAACTTAGGAACCAGTGTGGAATCTAACAGGTGATGGTGGCCAGATAAGGGGAAAGAGGAAATTGCA---TGC---ATTGGAGAGCTGATTTAAATGGCTCCTGACG-GGATGTC-------GGGGCTTGAGACTGGTGGGCTGAACAAGAGGGGGAAGGAGCCACAGGctgggcagct-gggaggaaagtggacacaatcgctgagatcatgaaaaccagggcagggaggtggagagcaagagatgaattctggatggagagatgcagtttgaggtgt-------------tctgg------aagcaactagatgtat-gagtctggagctccagagaaagggatgggtagagagggaaatccgggcatcatgcatgagtgaatggccattaaatccatggagatgggttgaggccacgagagaca--gggtg-------caaggaggagggcttag-----aactctgggaggcacccacatatagttgggaaaggaaagagaggcacttg--ggagcagaccaagaaaaagcagcc---aggtgtaga-aggaaagccaggaacatgtTTTAACGCAGATACTAAAGATTGGCCCTGTTTCAGGACCGGGAGTAGACAGCAAAGGCtccttccttatttctcccttcctccttcctttcctaccC----------------------------TGTGAAGGAAACGCAGATTTGCTCAAGTCTAATGAAACTGGTCCTGCTTTGCCCCATGGTGTTGCCCAAGCTTCATTAACCAAGTGCTGGCCTTGGCACTGTCTGC s panTro4.chr3 13787431 1271 - 202329955 TTCCCTTTATTCATCGAAGTAGGTATTCaatatttattaagcatctattatacgccagactccatgctag----gccctgagaataatgaagtgacccagatgctagggtccctgactttaggctgattatagtccagtgggaggagaaaggcaaataaacagtaagccgagcgcagtctgaaaagggctgtgacgagggccagctaa-ccagacttggaagtcagggaacatgtctgagaaaagtgatg--tttccacaggggcctgaagcatgagtatggccagaccaagtggagaaaaact-ggggga---------gagggaaagaaagggccacaggcagcttgc-cagaccacagagaacatgaacattcaaggatgtgaacaaaagcgagatggctgaa-cttggtgtttgagctgggagtggtgagcca------tgGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATCCTGAAG-------TAATTATCAAATACCCATttgggaatatg--------gcttcatgtggaatgaggcc---agaagcaga------------------------gcaaacctggaaacttaggaaccagtgtggaatctaacaggtgatggtggccagataaggggaaagaggaaattgca---tgc---attagagagctgatttaaatggctcctgaca-ggatgtc-------ggggcttgagactggtgggctgaacaagagggggaaggagccacaggctgggcagct-gggaggaaagtggacacaatcgctgagatcatgaaaaccagggcagggaggtggagagcaagagatgaattctggatggagagatgcagtttgaggtgt-------------tctgg------aagcaactagatgtat-gagtctggagctccagagaaagggatgggtagagacggaaatccaggcgtcaggcatgagtgaatggccattaaatccatggagatgggttgaggtcacgagagaga--gggtg-------caaggaggagggcttag-----aagtctgggaggcacccacatataattggagaaggaaagagaggcacttg--ggagcagaccaagaaaaagcagcc---aggtgtaga-aggaaagccaggaacatgtTTTAACGCAGATACTAAAGATTGGCCCTGTTTCAGGACCGGGAGTAGACAGCAAAGCCTCCTTCCTTATTTCTCCCTTCCTCTTTCCTTTCCTACCC----------------------------TGTGAAGGAAACGCAGATTTGCTCAAGTCTAATGAAACTGGTCCTGCTTTGCCCCATGGTATTGCCCAAGCTTCATTAACCAAGTGCTGGCCTTGGCACTGTCTGC i panTro4.chr3 I 92 C 0 s rheMac3.chr2 103615261 1283 + 192599291 TTCCCTTTATTCATCTAAGTAGGTACTCaatatttattaagaatctattatatgccagacttcatgctag----gccctgagaacaatgaagtgacccagatgctaggatccctgactttaagctgattatagtccagtgggaggagaaaggcaaataaatagtaagccaagcacagtctgaaaagggctgtgatgagggccagctaa-ccagacttggaagtcagggaatttgtctgagaaaagcggtg--tttccacaggggcctgaagcatgagtatggacagatgaaatggaggaaaaat-ggtgga---------gagggaaagaaagggccatgggtaggttgc-caggccacagagagtatgaacattcaaggatgtgaacaaaagccaaatggctgaa-CTTAATGTTTGAACTGGCAGTGGTGAGCCA------TGGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATTCTGAAG-------TAATTATCAAATACCCATTTTGGAATAtg--------gcttcatgtggaatgaggcc---gggagcaga------------------------gcaaacctggaaactcagggaccagtgtggaagctgacaggtgatggtggccagataaggggaaagaggaaattgcaaattgcatggttggagagctgatttaaatggctcctgaca-ggatgtcaatctcaggggcttgagattggtggggtgaacaagtgggggaaggagccacagtttgggcagct-gggaggaaagtggacacaatcgctcagatcatgaaaaccagggcagggaggtggagggcaagagatgaattctggatggagagatgcagtttgaggtgt-------------tctgg------aagcaactagatgtgt-gagtctggagctccagagaaagggatgggtagagagggagatccgggcatcatgcacaagtgaatggccattaaatccatggaggtggg-tgaggtcacgagagaga--gggtg-------caaggaggagggcttag-----aactttgggaggcacccacatataattgggaaaggaaagagaggcacttg--ggagcagaccaagaaaaggcagcc---aggtgtaga-aggaaagccaggaACATTTTTTAACACAGATACTAAAGATTGGCCCTGTTCCAGGACCAGAAGTAGACAGCAAAGCCTCCTTCCTTATTTCGCCCTTCCTCCTTCCTTTCCTACCC----------------------------TGTGAAGGCAACACAGATTTGCTCAAGTCTAGTGAAACTGGTCCTGCTTTGCTCCACAGTGTTGCCCAAGCTTCGTTAACCAAGTGCTGGTCTTGGCACTGTCTGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103254494 1287 - 192460366 TTCCCTTTATTCATCTAAGTAGATACTCGatatttattaagaatctattatatgccagacttcatgctgttctctccctgagaacaatgaagtgacccagatgctaggatccctgactttaagctgattatagtccagtgggaggagaaaggcaaataaatagtaagccaagcacagtctgaaaagggctgtgatgagggccagctaa-ccagacttggaagtcagggaatttgtctgagaaaagcggtg--tttccacaggggcctgaagcatgagtatggacagatgaaatggaggaaaaat-ggtgga---------gagggaaagaaagggccacgggtaggttgc-caggccacagagagtatgaacattcaaggatgtgaacaaaagccagatggctgaa-CTTAATGTTTGAACTGGCAGTGGTGAGCCA------TGGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATTCTGAAG-------TAATTATCAAATACCCATTTTGGAATATG--------GCTTCATGTGGAATGAGGCC---GGGAGCAGA------------------------GCAAACCTGGAAACTCAGGGACCAGTGTGGAAGCTGACAGGTGATGGTGGCCAGATAAGGGGAAAGAGGAAATTGCAAATTGCATGGTTGGAGAGCTGATTTAAATGGCTCCTGACA-GGATGTCAATCTCAGGGGCTTGAGATTGGTGGGGTGAACAAGTGGGGGAAGGAGCCACAGTTTGGGCAGCT-GGGAGGAAAGTGGACACAATCGCTCAGATCATGAAAACCAGGGCAGGGAGGTGGAGGGCAAGAGATGAATTCTGGATGGagagatgcagtttgaggtgt-------------tctgg------aagcaactagatgtgt-gagtctggagctccagagaaagggatgggtagagagggagatccgggcatcatgcacaagtgaatggccattaaatccatggaggtggg-tgaggtcactagagaga--gggtg-------caaggaggagggcttag-----aactttgggaggcacccacatataattgggaaaggaaagagaggcacttg--ggagcagaccaagaaaaggcagcc---aggtgtaga-aggaaagccaggaACATTTTTTAACACAGATACTAAAGATTGGCCCTGTTCCAGGACCAGAAGTAGACAGCAAAGCCtccttccttatttcgcccttcctccttcctttcctaccC----------------------------TGTGAAGGCAACACAGATTTGCTCAAGTCTAGTGAAACTGGTCCTGCTTTGCTCCACAGTGTTGCCCAAGCTTCGTTAACCAAGTGCTGGTCTTGGCACTGTCTGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101051072 1292 + 187378091 TTCCCTTTATTCATCTAAGTAGGTactcaatatttattaagaatcTATTATATGCCAGACTTCATGCTAG----GCCCTGAGAACAATGAAGTGACCCAGATGCTAAGATCCCTGACTTTAAGCTGATTATAGTCCAATGGGAggagaaaggcaaataaatagTAAGCCGAGCACAGTCTGAAAAGGGCTGTGATGAGGGCCAGCTAA-CCAGACTTGGAAGTCAGGGAATTTGTCTGAGAAAAGCGATG--TTTCCACAGGGGCCTGAAGCATGAGTATGGACAGATGAAGTGGAGGAAAAAT-ggtgga---------gagggaaagaaagggccACGGGTAGGTTGC-CAGGCCACAGAGAGTATGAACATTCAAGGATGTGAACAAAAGCCAGATGGCTGAA-CTTAGTGTTTGAACTGGCAGTGGTGAGCCA------TGGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATTCTGAAG-------TAATTATCAAATACCCATTTTGGAATATG--------GCTTCATGTGGAATGAGGCC---GGGAGCAGA------------------------GCAAACCTGGAAACTCAGGGACCAGTGTGGAAGCTGACAGGTGACGGTGGCCAGAtaaggggaaagaggaaattgTA---TGC---GTTGGAGAGCTGATTTAAATGGCTCCTGATA-GGATGTT-------GGGGCTTGAGATTGGTGGGGTGAACAAGTGGGGGAAGGAGCCACAGTTTGGGCAGCT-GGGAGGAAAGTGAACACTATCGCTCAGATGATGAAAACCagggcagggaggtggaggttaagAGATGAATTCTGGATGGAGAGATACAGTTTGAGGTGTATGAATGTGTGAGTCTGGAGCTCCAGAGAAAGGGATGGGTAGAATCTGGAGTTCCAGAGAAAGGGATGGGTAGAGAGGGAGATCCGGGCATCATGCACAAGTGAATGGCCATTAAATCCATGGAGGTGGG-TGAGGTCACGAGAGAGAGTGGGTG-------CAAGGAGGAGGGcttag-----aactttgggaggcaccCACATATAattgggaaaggaaagagaggcacTTG--GGAGCAGACCAAGAAAAAGCAGCC---AGGTGTAGA-AGGAAAGCCAGGAACATGTTTTAACACAGATACTAAAGATTGGCCCTGTTCCAGGACCAGAAGTAGACAGCAAAGcctccttccttatttcccccttcctccttcctttcctaccc----------------------------tGTGAAGGCAGCACAGATTTGCTCAAGTCTAGTGAAACTGGTCCTGCTTTGCTCCACAGTGTTGCCCAAGCTTTGTTAACCAAGCGCTGGTCTTGGCACTGTCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4917591 1282 + 91754291 TTCCCTTTATTCATCTAAGTAGGTACTCaatatttattaagaatctattatatgccagacttcatgctag----gccctgagaacaatgaagtgacccagatgctaggatccctgactttaagctgattatagtccagtgggaggagaaaggcaaataaatagtaagccgagcacagtctgaaaagggctgtgatgagggccaattaa-ccagacttggaagtcagggaatatgtctgagaaaagcgatg--tttccacaggggcctgaagcatgagtatggacagatgaagtggaggaaacat-ggtgga---------gagggaaagaaagggccacgggtaggttgc-caggccacagagagtatgagcattcaaggatgtgaacaaaagccagatggctgaa-CTTAGTGTTTGAACTGGCAGTGGTGAGCCA------TGGAAAAGCAGACAAGGGTCAGTGTCCTTCTGGGCCACATGAAGTAACTTTGCACTTATTCTGAAG-------TAATTATCAAATACCCATTTTGGAATATG--------GCTTCATGTGGAATGAGGCC---AGGAGCAGA------------------------GCAAACCTGGAAACTCAGGGACCAGTGTGGAAGCTGACAGGTGATGGTGGCCAGATAAGGGGAAAGAGGAAATTGCAAATTGCATGGTTGGAGAGCTGATTTAAATGGCTCCTGACA-GGATGTCAATCTCAGGGGCTTGAGATTGGTGGGGTGAACAAGTGGGGGAAGGAGCCACAGTTTGGGCAGCT-GGGAGGAAAGTGGACACAATCGTTCAGATGATGAAAACCAGAGCAGGGAGGTGGAGGGCAAGAGATGAATTCTGGATGGAGAGATGCGGTTTgaggtgt-------------tctgg------aagcaactagatgtgt-gagtctggaactccagagaaagggatgggtagagagggagatccgggcatcatgcacaagtgaatggccattaaatccatggaggtggg-tgaggtcacgagagaga--gggtg-------caaggaggagggcttag-----aactttgggaggcacccacatataattgggaaaggaaagagaggcacttg--ggagcagaccaagaaaaagcagcc---aggtgtaga-aggaaag-cAGGAACATGTTTTAACACAGATACTAAAGATTGGCCCTGTTCCAGGACCAGGAGTAGACAGCAAAGCCtccttccttatttcccccttcctccttcctttcctaccC----------------------------TGTGAAGGCAACACAGATTTGCTCAAGTCTAGTGAAATTGGTCCTGCTTTGCTCCACAGTGTTGCCCAAGCTTCATTAACCAAGTGCTGGTCTTGGCACTGTCTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92397722 1254 - 98464013 TTCCCTTTATTGGTCTAAGTAGGTACTCaatatttattaagcacctgttacatgccagactccatgctag----gccgtgagaataatgaagtgacccagatgcgagggtccctgactttaagctgctcacagtccagtgggaggagaaaggggaataaacattaagcccagcacagtctgaaaagggctgtgacgatggtcagctaa-ccagacttggaagtcagggaacgtgtctgaggaaagcgatg--cttccaccgggatctgaagcgtgagtacggccagatgaagtggagaaaaattcggggga---------gagg----gaaagggccatgggcaagttac-caggccacagagagcatgaacgttcaagaatatgaacataagtgagac-cttgga-cttggcgtttgagctgggagtggtgagcca------tggaaaagcagacaagagtcaCTGTCCTTCCGGGTCACATGAAGTAACTTTGCACTTATCCTGAAG-------TAACTGTCAAATACCCATTTTGGAAGATG--------GCTTCATGTGGAATGAGGCC---AGGAGCAGA------------------------GCAAACGTAGAAACAGGGGGACCAGTGTGGACGCTGACAGGTGATGGTGGCCAGCTAAGGGGACAGAGGGGACTGCA---TGG---ACTGGAGAGCTGATTGAGATGGCTCCTGACA-GGAGGCT-------GGGGTTTGAGACTGGTGGGGTGAACGAGTGGGGGAATGAGCCACAGGCTGGGCAGCT-GGGAGGAAAGTGGACACAGTCACCGAGATCATGAAAACCAGGGCAGGGAGGTAGAGGGCAAGAGATGAATTCTGGATGGAGAGA---AGTTTGAGGTGT-------------CCTGG------AAGCAGCTAGGTGTAT-GAG--AAGAGCTCCAGAGAAAGGGATGGGTAGAGAGGGAAATTGGGGTGTCATGAACACGTGAATGGGCATTAAAGCCATGGTAGTGGG-------GACCCAAGGGA--GGGTG-------CAAGGAGGAGGGCTTAG-----AACTCTGGGTGGTACCCACATGTAACTGGGAAAAGAAAGAGAGGCACTTA--GGAGCAGACCAAGGAGGAGCAGCC---AGGTGTGCAGAGGAAAGCCAGGAACATGTTTTAACACAGATACTAAAGATTGGCCC-GTTCCAGGACCGGGAGTAGCCAGCTCAGCCTTCCTCCTTATTTC-CCCTTCCTCCTTCCTTTCCTACCC----------------------------TGCGAAGGGAACAGCGCTTTGCTCAAGGCTCGTGAAGCTGCTCCGGCTTTGCCCCATGGTGCTGCCCAAGCTTCATTAACCAAGTGCCAGCCTCAGCACTGTCTGC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24776073 1307 - 42124431 TTTCatttattcatgcaagcagatattcaatatttattgagcatctactatacaccagcctccatgctag----accaggagaataacgaaatgacccagatgccagggtctctgactccaagctgattatggctctgtgggagaggaaaggcagagaaacagcaagctaagtgccgtccgaaacaggctgtaacgaagggcaggtaagccaggcttgggcaccagtgaatgcttccaaggaaagtgatgtctctccacaggaacccaaaggatgagtgtggccagg------ggaggagaggt-tggagatatccccaggtgagggggaaAGGGCCAAGGGAAAACTCCTTGGGTCATAG----CAGAAACACCAAAGGAAGTAGATGGAAGCAGGATGGTTGGACCTCCGTGTTTGAGCCTGGAGCAGC-AGCCATGAAGGTGGAAATGTAGACAAGAGTCAGATTCCTTTTAGACTCCATGAAGGAATTTGGTGTTTATCCTAAAGCCAGTGATAATGATCAAATTTCCATTTTGAAA-ACGTCACCCATACTTGATGTGGAGTGTGGCATTGGGGAGTGGGGGTGGCAGTGGTGTGTCTGTGCACGCAAACCTAGAAAAAGGGACACTGGCTAGGAGACTGCCAGGCTGTGGGGCTGAGATAAGAG-----------------------------AAGAGCTCATTTAGATGGTTCGTGGCCTGGAAGTC-------ATGACTTCA----GGTGAGGAAGGTGAGAGAGGGTGAAAGCCAAAgcttggaccactggggaggacagtaaatgtgatcactgagaaaatgaaaatcaggaccaggggctgtgggagaagagaggaattctgattgaagatacacagtttgaggtgt-------tgt---tctag------aagtaggtgtgtgcag-gagtctggagctcaagagaaagggttgagtcaagag----ctttggaagtca--------taaatggtcattaaagccatt---------tctgatcattcagggat--ggatgagctcatccagggagagggcttggaacacaactctgggaggca-gtgtgtgtaactaggaaaaagaagagaggcacttgtaaaagccgaccaagaaagagcagcccagggaggtagg-aggaaagccatggccttgttgtaacacagaaaccaaatactgagattgttccaaaaaagggagtagccaacAAAACCCTGTTTCTTATTCC-CAGTTCCTCCTTCCTTTCCTTCCCCTCCCAGAGAAGGATGGCCCGCAGGACATTGGGAGGGAACTCACTCTT--CTAAGACTAGTGGAACTGGTCCTGCATTGCCCCACAGTGTGGCCCACGCTGCATCAACAAAATGCAGGTGTC------------ i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e nomLeu3.chr11 14374116 50755 - 123690457 T a score=694317.000000 s hg38.chr3_KI270781v1_alt 39950 292 + 113034 AGAATACACTGGACTGGAcgccactgcactccagcctgggtgacagagtgagactgtcacccaggctgaaagaaagaagaagggaaaaATGAATGAAAAG---AAGAGATGAATGTTCTGAAGAC---AAGGACTTTCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGGTGGGACTGA-GGTTAATCCCGGGACCACGTTGAGCATTATTC-TGTCTAATGAGAGTATGTGAGG----TAGTTATTTAGTTCATTCGCCATGGTTATTGAGGGCTTATCATACACTAGATGGA s panTro4.chr3 13788702 295 - 202329955 AGAATACACTGGACTGGAcgccactacactccagcctgggtgacagagtgagactgtcacccaggctgaaagaaagaagaagggaaaaATGAAGGAAAAGGAGAAGAGATGAACGTTCTGAAGAC---AAGGACTTTCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGGTGGGACTGA-GGTTAATCCCAGGACCACGTTGAGCATTATTC-TGTCTAATGAGAGTCTGTGAGG----TAGTTATTTAGTTCATTCGCCATGGTTATTGAGGGCTTATCATACACCAGATGGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323361 299 - 123690457 AGAATACACTGGACTGGAcgccactacaatccagcctgggtgacagagtgagactGTCACCCAGGCTGAAAGAAAGAGGAAGAGACAAATGAATGAAAAGGAGAAGAGATGAACGTTCTGAAGAC---AAGGACTTTCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAG-TATCT----TAAGGTGGGACTGT-GGTTAATCCCGGGACCACGTTGAGCATTATTC-TGTCTAATGAGAGTATGCGAGGTAGTTAGTTATTTAGTTCATTCGCCATGGTTATTGAGGGCTTATCATACACCAGATGGA i nomLeu3.chr11 T 50755 C 0 s rheMac3.chr2 103616544 299 + 192599291 AGAATACACTGGACTGGATgccactacactccagcctgggtgacagagtgagactgttacccaggctgaaagaaagatgaagagaaaaATGAATGAAAAGGAGAAGAGATGAACGTTCTGAAGAC---AAGGACTTCCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGGTGGGACTGG-GGTTAATCCCAGGACCACGTTGAGCATTATTC-TGTCTGACGAGAGTATGCGAGGTAGTTAGCTATTTAGTTCATTCGCCCTGGCTATTGAGGGCCTATCATACACCAGATGGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103255781 299 - 192460366 AGAATACACTGGACTGGATgccactacactccagcctgggtgacagagtgagactgttacccaggctgaaagaaagatgaagagaaaaATGAATGAAAAGGAGAAGAGATGAACGTTCTGAAGAC---AAGGACTTCCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGGTGGGACTGG-GGTTAATCCCAGGACCACGTTGAGCATTATTC-TGTCTGATGAGAGTATGTGAGGTAGTTAGCTATTTAGTTCATTCGCCCTGGCTATTGAGGGCCTATCATACACCAGATGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101052364 299 + 187378091 AGAATACACTGGACTggatgccactacactccagcctgggtgacagagtgagactgtcacccaggctgaaagaaagatgaagagaaaaatgaatgaaaagaagaagagatgaacgttctgaagaC---AAGGACTTCCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGGTGGGACTGG-GGTTAATCCCGGGACCACGTTGAGCATTATTC-TGTCTGATGAGAGTATGTGAGGTAGTTAGCTATTTAGTTCATTCGCCCTGGCTATTGAGGGCCTATCATACACCAGATGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4918873 299 + 91754291 AGAATACACTGGACTGGATgccactacactccagcctgggtgacagagtgagactgtcacccaggctgaaagaaagatgaagagaaaaATGAATGAAAAGGAGAAGAGATGAACGTTCTGAAGAC---AAGGACTTCCCC-TGAG---TCTTACCCAACTAAGGATTTTGCCAA-TATCT----TAAGATGGGACTGG-AGTTAATCCCGGGACCACGTTGAGCATTATTC-TGTCTGATGAGAGTATGTGAGGTAGTTAGCTATTTAGTTCATTCGCCCTGGCTATTGAGGGCCTATCATACACCAGATGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92398976 270 - 98464013 --AGAACACTGGACCGGATGCCACTAC-------------------AGTGAGACTGTCACCCAGGCTGAAAGAGAGAAGAAGAGAAAAATGAATGAAAAG---AAGATATGACCGTTCT-----T---AAAGACTTTCCC-TGAG---TCTTACCCAACTAAGGTTTTTGCCAA-AATCT----TAAAGTGAGACTGA-GGTTAATCCC-GGACCACACTGAGCATTGTTCTTGTCTGATGAGCCTATGTGATGTAGTCAGCTATTTAGTTCTTCGGCCCTGGTTATCCAGGGTCTATCATACACCAGATGGA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24777380 241 - 42124431 ---------------------------------GTATGGGTCATAAAG-AAAACT--------GACTG-AGGAAAGAATAAG---------------------ATGAAATGAATATGCTTAAGACAGAAGAGACTTGCCCGTAAGTTATTATGCCCAGCTAAGGATTATACCTGTTATCCTTTATTAACCAGGACTGGAAGTTAATTCTGGGACC-TGGTGAGCTCTGTCCTTTTCTGATGATTGCATATGACATAGTTAACTCTTCATT-------CCCTGGTTATGGAGTGCCTACCATGCAGCAGGTGGA i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M a score=27613.000000 s hg38.chr3_KI270781v1_alt 40242 16 + 113034 AATCGAAAATCCAATT- s panTro4.chr3 13788997 16 - 202329955 AATCGAAAATCCAATT- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323660 16 - 123690457 AGTCGAAAATCCAATT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103616843 16 + 192599291 AGATGAAAATCCAATT- i rheMac3.chr2 C 0 I 227 s macFas5.chr2 103256080 16 - 192460366 AGATGAAAATCCAATT- i macFas5.chr2 C 0 I 1 s papAnu2.chr2 101052663 16 + 187378091 AGATGAAAATCCAATt- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919172 16 + 91754291 AGATGAAAATCCAATT- i chlSab2.chr15 C 0 I 1 s canFam3.chr34 24777621 16 - 42124431 -AACAGAAATCCCAttt i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e calJac3.chr15 92399246 0 - 98464013 C a score=3420.000000 s hg38.chr3_KI270781v1_alt 40258 2 + 113034 CC s panTro4.chr3 13789013 2 - 202329955 CC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323676 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103256097 2 - 192460366 CC i macFas5.chr2 I 1 C 0 s papAnu2.chr2 101052679 2 + 187378091 cc i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 4919189 2 + 91754291 CC i chlSab2.chr15 I 1 C 0 s canFam3.chr34 24777637 1 - 42124431 -c i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e rheMac3.chr2 103616859 227 + 192599291 I e calJac3.chr15 92399246 0 - 98464013 C a score=40837.000000 s hg38.chr3_KI270781v1_alt 40260 24 + 113034 ggccgggcgcggtggctcacgcct s panTro4.chr3 13789015 24 - 202329955 ggccgggcgcggtggctcacgcct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323678 23 - 123690457 ggccgggcgcggtggctca-gcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617086 24 + 192599291 ggccgggcgcggtggctcaagcct i rheMac3.chr2 I 227 C 0 s macFas5.chr2 103256099 24 - 192460366 ggccaggtgcggtggctcacgcct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101052682 24 + 187378091 ggctgggtgcggtggctcacgcct i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 4919191 24 + 91754291 ggccaggtgcagtagctcacgcct i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24777638 9 - 42124431 ---------------ctctcgcct i canFam3.chr34 C 0 I 102 e ponAbe2.chr3 13769277 2612 - 202140232 M e calJac3.chr15 92399246 0 - 98464013 C a score=69994.000000 s hg38.chr3_KI270781v1_alt 40284 39 + 113034 gtaatcccagcactttgggaggctgaggcgggtggatca s panTro4.chr3 13789039 39 - 202329955 gtaatcccagcactttgggaggctgaggcgggtggatca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323701 39 - 123690457 gtaatcccagcactttgggaggctgaggcgggcggatca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617110 39 + 192599291 gtaatctcagcactttgggaggccgagacgggcggatca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103256123 39 - 192460366 gtaatcccagcactttggaaggccaaggcgggcagatca i macFas5.chr2 C 0 M 4760 s papAnu2.chr2 101052706 39 + 187378091 gtaatcccagcactttgggaggccaaggcgggcagatca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919215 39 + 91754291 gtaatcccagcactttgggaggccaaggcaggcagatca i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e canFam3.chr34 24777647 102 - 42124431 I e calJac3.chr15 92399246 0 - 98464013 C a score=66350.000000 s hg38.chr3_KI270781v1_alt 40323 53 + 113034 cgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctcta s panTro4.chr3 13789078 53 - 202329955 cgaggtcacgagatcgagaccatcctggctaacatggtgaaatcccgtgtcta i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14323740 53 - 123690457 cgaggtcaggagatcgagaccatcctggctaacatggtgaaacaccgtctcta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617149 53 + 192599291 cgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctcta i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 101052745 53 + 187378091 agaggtcaggagatcgaaaccatcctggttaacacggtgaaaccccgcctcta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919254 53 + 91754291 cgaggtcaggagatcgaaaccatcctggttaacacggagaaaccccgtctcta i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13769277 2612 - 202140232 M e macFas5.chr2 103256162 4760 - 192460366 M e canFam3.chr34 24777647 102 - 42124431 I e calJac3.chr15 92399246 0 - 98464013 C a score=270923.000000 s hg38.chr3_KI270781v1_alt 40376 171 + 113034 ctaaaaat-acaaaaaattagccaggggtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggctacacagttagactccgtatcaaaaaa s panTro4.chr3 13789131 171 - 202329955 ctaaaaat-acaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagtttctcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactgcagcctgggcgacacagttagactccgtatcaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13771958 169 - 202140232 ctaaaaat-acaaaaaattagctgggtgtggtggcgggcgcctgta-tcccatctact-gggaggctgaggcaggagaatggcgtgaatccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggctacagagttagactccgtctcaaaaaa i ponAbe2.chr3 M 2612 C 0 s nomLeu3.chr11 14323793 171 - 123690457 ctaaaaat-acaaaaaattagccgggcgcggtggcgggcgcctgcagtcccagcttctcgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagatcgcgccactgcactccagcctgggggacagagcgagactccgtctcaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617202 172 + 192599291 ctaaaaagtacaaaaaactagccgggcgaggtggcgagcgcctgtagtcccagctactcgggaggctgagccaggagaatggcgtaaacccgggaggcggagcttgcagtgagcagagatccggccaccgcactccagcctgggtgactgagcgagactccgtctcaaaaaa i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 101052798 172 + 187378091 ctaaaaatacaaaaaaattagccgggcgaggtggcgggcgcttgtagtcccagctactccggaggctgaggcaggaggatagcgtgaacccgggaggcggagcttgcagtgagccgagatcgccccactgctccccagcctgggcgacagagcgagactctgtctcaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919307 170 + 91754291 ctaaaaataaaaaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcagagcttgcagtgagctgagatcgcgccactgcgcccaggcctgggcgacagagcaagact--gtctgagaaag i chlSab2.chr15 C 0 I 28 e macFas5.chr2 103256162 4760 - 192460366 M e canFam3.chr34 24777647 102 - 42124431 I e calJac3.chr15 92399246 0 - 98464013 C a score=-900.000000 s hg38.chr3_KI270781v1_alt 40547 23 + 113034 aaaaaaaaaaaagaaaagaa---------------------aag s panTro4.chr3 13789302 6 - 202329955 aagaaa-------------------------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13772127 6 - 202140232 aaaaag-------------------------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14323964 23 - 123690457 aaaaaaaaaaaaaaaaaaaa---------------------gag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617374 19 + 192599291 -aaaaaagaaagaaaga------------------------aag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103260923 20 - 192460366 aaaaaaaaaaaaaaaaa------------------------aag i macFas5.chr2 M 4760 C 0 s chlSab2.chr15 4919505 44 + 91754291 aaagaaagaaagaaagaaagtaaggaaggaaggaaggaaggaag i chlSab2.chr15 I 28 C 0 e papAnu2.chr2 101052970 0 + 187378091 C e canFam3.chr34 24777647 102 - 42124431 I e calJac3.chr15 92399246 0 - 98464013 C a score=15478.000000 s hg38.chr3_KI270781v1_alt 40570 11 + 113034 a---aaagaaaaTC s panTro4.chr3 13789308 2 - 202329955 ------------TC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13772133 6 - 202140232 --------aaaaTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14323987 14 - 123690457 aaagaaagaaaaTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103617393 14 + 192599291 aaagaaagaaaATC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103260943 14 - 192460366 aaagaaagaaaaTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101052970 13 + 187378091 -aaaaaagaaaatc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919549 14 + 91754291 aaagaaagaaaATC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92399246 11 - 98464013 ---AGATGAAAATC i calJac3.chr15 C 0 C 0 e canFam3.chr34 24777647 102 - 42124431 I a score=788578.000000 s hg38.chr3_KI270781v1_alt 40581 283 + 113034 CAGTTCCCTCTCTGCTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCACGGTCCCCAGCCCTCAAAGTCTCACCCAGGCATCGGTCTG-AATCCTCACAGGTTTCTctctctccgtcctcccctctctcttctctcctcct--ctctctcccccgaccccctgtccct-ctctcccgctccCTAGATACTGCTGAGGGCCGCCTTCTGGCTACCCTGGGAGCCCACATATATTGGCTCCCCTTCACCCTCCCCCTTCCTCACTGCC s panTro4.chr3 13789310 283 - 202329955 CAGTTCCCTCTCTGCTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCACAGTCCCCAGCCTTCAAGGTCTCAGCCAGGCATCGGTCTG-AATCCTCACAGGTTtctctctccccgtcctcccctctgtcttctctcctcct--ctctctcccccgaccccctgtccct-ctctcccgctccctAGATACTGCTGAGGGCCGCCTTCTGGCTACCCTGGGAGCCCACATATATTTGCTCCCCTTCACCCTGCCCCTTCCTCACTGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13772139 280 - 202140232 CAATTCCCTCTCTGCTCACTAGCCTGTGAGTGCAAAAGGGACCGCAGGAAGGCTAGCGAGCCATATTCACGGTCCCCAGCCCTCAAAGTCTCACCCGGGCATCGGTCTC-AGT-CTCACAGGtttctctctcctcgtcctcccctctctc--ctctcctcct--ctctctcccccgaccccctgtccct-ctctcccgctccctAGATACTGCTGAGGGCCGCCTTCTGGCTGCCCTGGGAGCCCACATATATTTGCTCCCCCTCACCCTCCCCCTTCCTCACTGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14324001 282 - 123690457 CAATTCCCTCTCTGCTCACTAGCCTGTGACTGCAAAAGGAACCGCAGGAAGGCTAGCGAGCCATATTCGTGGTCCCCAGCCCTCAAAGTCTCACCCAGGCATTGGTCTG-AAT-CCCACAGGTTtctctctccccgtcctcccctctctcttctctcctcct--ctctctcccctgaccccctgtccct-ctctcccgctccctAGATACTGCTGAGGGCCGCCTTCTGGCTGCCCTGGGAGCCCACGTATATTTGCTCCCCCTCACCCTCCCCCTTCCTCACTGCC i nomLeu3.chr11 C 0 M 100 s rheMac3.chr2 103617407 282 + 192599291 CAATTCCCTCTCTGTTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCATAGTCCCCAACCCTCAAAGCCTCGCCCAGGCATCGTTCTG-AATCCCCACAGGTTtctctcttcccctcctcctctttctcttctctccttct--ctctctccccccaccccctgtccct-ctcTCCCACTCCCTAGGTACTGCTGAAGGCCACCTTCTGGCTGCGCT-GGAGCCCACATATATTTACTCCACTTCGCCCTCCACCTTCCTCACTGCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103260957 282 - 192460366 CAATTCCCTCTCTGTTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCATAGTCCCCAACCCTCAAAGCCTCGCCCAGGCATCGGTCTG-AATCCCCACAGGTTtctctcttcccctcctcctctttctcttctctccttct--ctctctccccccaccccctgtccct-ctctcccactccctAGGTACTGCTGAAGGCCACCTTCTGGCTGCGCT-GGAGCCCACATATATTTACTCCCCTTCGCCCTCCACCTTCCTCACTGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101052983 282 + 187378091 caattccTTCTCTGTTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCATAGTCCCCAACCCTCAAAGCCTCACCCAGGCATCGGTCTG-AATCCCCGCAggtttctctctccccctcctcctctttctcttctctccttct--ttctctccccccacctcctgtccct-ctctcccactccctAGGTACTGCTGAGGGCCACCTTCTGGCTGCCCT-GGAGCCCACATATATTTACTCCCCTTCGCCCTCCACCTTCCTCACTGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919563 282 + 91754291 CAATTCCCTCTCTGTTCACTAGCCTGTGAGTGCAAAAGGGACCACAGGAAGGCTAGCGAGCCATATTCATAGTCCCCAACCCTCAAAGCCTCACCCAGGCATCGGTCTG-AATCCCCGCAGGTTtctctctccccctcctcctctttctcttctctccttct--ctctctcCCCCCACCCCGTGTCCCT-CTCTTCCACTCCCTAGGTACTGCTGAGGGCCACCTTCTGGCTGCCCT-GGAGCCCACATATATTTACTCCCCTTCGCCCTCCACCTTCCTCACTGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92399257 250 - 98464013 CAATTCCCTCTCTGCCCACC----------------------------AAGGCCAACGAGCCATAGTCACGGCCCCCAGCCCTCAAAGCCTCACCCAGGCCTGGGTCTGAAATCCCCACAGGtttctctctccccctccccctctctctcctttc-----ct--ctgtctccccgcaccccctgtccctcctctcccgctccctAGGTACTGCTGAGGGCCACCTTCTGGCTACACTGGGAGCCCACATATATTTGC-CCCCTTCCCCCTCCCCC-CCCTCACTGCC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24777749 194 - 42124431 CAGAtctccctctatcccttcttctctgacc------------------------------------------------ctctcaatttctctccct-------------gtttcccac---ttattatctccttgaccctctccttttctccccatcacctgccctccttctctgtcttcctcacctt-ct---ccACTACCTAAACA-----GACTTCCTGCTTCAGGCTTCCCC-AGAGATTAT-------------------CCCTCCCCCTGTCTCACTGCC i canFam3.chr34 I 102 C 0 a score=342040.000000 s hg38.chr3_KI270781v1_alt 40864 146 + 113034 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTTCTCTACTTTGCAATTCTTTGATGACGCTGAGCTGAGCGAGCCCGCGCTCAG-CCCGAAGAACCCCTTTCTCCTCGCACTGTGTGCCAACCGCATCC-TTCCTTGCGAAACCAGTTCC s panTro4.chr3 13789593 146 - 202329955 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTTCTCTACTTTGTAATTCTTTGATGACGCTGAGCTGAGCGAGCCCGCGCTCAA-CCCGAAGAACCCCTTTCTCCTCGCACTGTGTGCCAACCGCATCC-TTCCTTGCGAAACCAGTTCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13772419 148 - 202140232 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTCCTCTACTTCGCAATTCTTTGATGACGCTGAGCGGAGCGAGCCCGCGCTCAACCCCGAAGAACCCCTTTCTCCTCGCACTGTGTGCCAACCCCATCCTTTCCTTGCGAAACCAGTTCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103617689 146 + 192599291 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTCCTCTACTTCGCAATTCTTTGATGACACTGAGCGGAGCCAGCCGGCGCTCAA-CCGGGAGAACCCCTTTCTCCTCGCACTGTGTGCCAACCCCATCC-GTCCTCGCGAAACCAGCTCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103261239 146 - 192460366 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTCCTCTACTTCGCAATTCTTTGATGACACTGAGCGGAGCCAGCCGGCGCTCAA-CCGGGAGAACCCCTTTCTCTTCGCACTGTGTGCCAACCCCATCC-GTCCTCGCGAAACCAGCTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101053265 146 + 187378091 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTCCTCTACTTCGCAATTCTTTGATGACACTGAGCGGAGCCAGCCCGCGCTCAA-CCGGGAGAACCCCTTTCTTCTCGCACTGTGTGCCAACCCCATCC-ATCCTCGCGAAACCAGCTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919845 146 + 91754291 CAAGGCGTCCTTGGTAATCA-GCCGCTTTCTCCTCTACTTCGCAATTCTTTGATGACGCTGAGCGGAGCCAGCCCGCGCTCAA-CCGGGAGAACCCCTTTCTCCTCGCACTGTGTGCCAACCCCATCC-GTCCTCGCGAAACCAGCTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92399507 120 - 98464013 CAAGGTGTCCTCGGTAATCA-GCCGTTTTCTCC------------------GACAACGCAGAGCG----CATCCCGCACTCAA-TCGGGAG---CCCTTTCTCTTCGCACTGTGTGCCAACCCCATCC--TCCTGACGAAACCAGTTCC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24777943 136 - 42124431 TATGGTGTCCTTGGTAACAAGGACACTTTCTCCTCTAC---AAACTTCTTTGAAGACACAGTGTAG----AGCCCACACTTCA-TCTGGAGAACA----TCTCCCTGCCCTGTGCACCCACTCCCATG-GCCCTTGCGAAAACAGCTCC i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 14324283 100 - 123690457 M a score=621202.000000 s hg38.chr3_KI270781v1_alt 41010 237 + 113034 -TAACTTCCCCCTCGCGAGC--GCCTCGT-GGAAGTCGCAGATCCGGAGACCCC-ATCTC--------TGATAGCCGCAGTGCGCTCTGGGTGTGGCTGCTTCCTCACGCTTTCCAATGCCAACCTGTCCAGGCGCCCC-GGACTGAACCTGGGGGCGTGGGGACT-GGGAGGGAGACTTCATTTTCAC------------------------TTTTTAAAAAATACTTTTGATTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCTATT s panTro4.chr3 13789739 237 - 202329955 -TAACTTCCCCCTCGCGAGC--GCCTCGT-GGAAGTCGCAGATCCGGAGACCCC-ATCTC--------TGATAGCCGCAGTGCGCTCTGGGGGTGGCTGCTTCCTCACGCTTTCCAATGCCAACCTGTCCAGGCGCCCC-GGACTGAACCTGGGGGCGTGGGGACT-GGGAGGGAGACTTCATTTTCAC------------------------TTTTTAAAAAATACTTTTGATTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCtatt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13772567 239 - 202140232 -TAACTTCCCCCTCGCGAGC--GCCTCGTGGGAAGTCGCAGATCCGGAGACCCC-ATCTC--------TGATAGCCGCAGTGCGCCCTGGGCGTGGCTGCTTCCTCACGCTTTCCAAAGCCAGCCTGTCCAGGCGCCCC-GGACAGAACCTGGGGCCGTGGGGACTGGGGAGGGAGACTTCATTTTCAC------------------------TTTCTTTTAAATACTTTTGATTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCtatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14324383 237 - 123690457 -TAACTTCCCCCTCGCGAGC--GCCTCGT-GGAAGTCGCAGATCCAGAGACCCC-ATCTC--------TGATAGCCGCAGTGTGCTCTCTGTGTGGCTGCTTCCTCACGCTTTCCAATGCCAACCTGTCCAGGCGTCCC-GGACAGAACCTGGGAGCGTGGGGACT-GGGAGGGAGACTTCATTTTCAC------------------------TTTAAAAAAAATACTTTTGATTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCTATT i nomLeu3.chr11 M 100 C 0 s rheMac3.chr2 103617835 247 + 192599291 -TAACTTCCCTCTCGCGAGC--CCCTCGT-AGAAGTCGCAGATTCGGAGACCTC-ATCTCCGA-----TGATAACCGCAGTGCGCTCTCTGCGTGGCTGCTTGCTCACGCTTTCCAGTGCCGA-CTGTCCAGGCGCCCC-AGACAGAATCTGGGGGCGTGGGGACT-GGGAGACAGACTTCATTTTCAC----------------TTTTTTTTTTTTTTTTTGGTACTTTTGATTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCTATT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103261385 249 - 192460366 -TAACTTCCCTCTCGCGAGC--CCCTCGT-AGAAGTCGCAGATTCGGAGACCTC-ATCTCCGA-----TGATAAACGCAGTGCGCTCTCTGCGTGGCTGCTTGCTCACGCTTTCCAGTGCCGA-CTGTCCAGGCGCCCC-AGACAGAATCTGGGGGCGTGGGGACT-GGGAGACAGACTTCATTTTCACt--------------ttttttttttttttttttggtacttttgattgttttAC----CACGGACAAAAGAAAGGATATGGGTAAT--GCTATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101053411 242 + 187378091 -TAACTTCCCTCTCGCGAGC--TCCTCGT-AGAAGTCGCAGATTCGGAGACCCC-ATCTCCGA-----TGATAACCGCAGTGCGCTCTCTGGGTGGCTGCTTGCTCACGCTTTCCAGTGCCGACCTGTCCAGGCGCCCT-AGACAGTATCTGGGGGCGTGGGGACT-GGGAGacagacttcat----------------------tttttttttttttttttggtacttttgaTTGTTTTAC----CACGGACAAAAGAAAGGATATGGGTAAT--gctatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4919991 264 + 91754291 -TAACTTCCCTCTCGCGAGC--CCCTCGT-AGAAGTCGCAGATTCGGAGACCCC-ATCTCCGA-----TGACAACCGCAGTGGGCTCTCTGCGTGGCTGCTTGCTCACGCTTTCCAGTGCCGACCTGTCCAGGCGCCCC-AGACAGAATCTGGGGGCGTGGGGACT-GGGAGACAGACTTCATTTTCACTttttttcttttttctttttcttttttctttttGGTACTTTTGATTGTTTTAC----CATGGACAAAAGAAAGGATATGGGTAAT--GCTATT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92399627 237 - 98464013 -TAACTTCCCCCTGGCGAGC--CTCTGGT-GGAAGTCGCAGATCCGAAGACCTCTCTCTCGGACTGACGGACAGCCGCAGGGCGCT-----------------CTCACGCTTTCCAAAGCCACCCTGTCCAGGCGCGCC-CGACAGAACCTGGGG-CACAGAGACT-GCGAGAGAGACTTCATTTTCAC-------------------TTTTTTTTTTTGTTTGTACTTTTGACTGTTTTCCCGTGCATGGACAAAAGAAAGGATAGGAGTAAT--GCTACT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24778079 209 - 42124431 TTAACTTCCC-CTGGCAGCCTTCTCTCTC-CCAGGACCCAGCTCCCAAGAAATA-GTCTC--------CAAGA--CGGAATGCCTTCTCCAGGTGACAGCATCCTCATGGTCTTGCACCTCAGCTAGTCCTGGAGCCCTAGGACAGAATCTAGG---------------------------ATTTT---------------------------CTTTTGTTTGGTAGTTCTGATTGTGTTAC----TATGTACTAGAGAAAGGATACAAGTGATACGCTA-- i canFam3.chr34 C 0 C 0 a score=532241.000000 s hg38.chr3_KI270781v1_alt 41247 257 + 113034 GATTATTTTTATATTTGTttattattattattattattattattattattattattattattattatttg-----agacagagtttcgc-ttttgttgcccagactggagtgcagtggcccgatctcggctcactgcaacctccgcct-ccaggttcaagcgattctcctgcctta-gcctcccgagtagctgggattacaggcgcctgccaccatgcccggc-aatttttttgtagttttagt--agagggtgtttcaccgtgttgg s panTro4.chr3 13789976 227 - 202329955 gattatttttatat----------------------------ttattattattattattattattatttg-----agacggagtttcgc-ttttgttgtccagactggagtgcagtggcccgatctcggctcactgcaacctccgcct-ccaggttcaagcgattctcctccctta-gcctcccgagtagctgggattacaggcgcctgccaccatgcccggc-aa-ttttttgtagttttagt--agagggtg-ttcaccgtgttgg i panTro4.chr3 C 0 I 578 s ponAbe2.chr3 13772806 259 - 202140232 gattatttttatatttatttattattattattattatta---ttattattattattattattattatttg-----agactgagtttcgctttttgtcgcccagactggagtgcagtggcccgatctcggctcactgcaacctccgcct-ccaggttccagcgattctcctgccttatgcctcccgagtagctgggattacaggcgcctaccaccatgcccggctaatttttttgtagttttagtagagagggtgtttcaccgtgttgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14324620 214 - 123690457 GAtt--------------------------------------ttat--ttattattattattattatttg-----agacggagttgtgc-ttttgtcgcccagactggagtgcagtggcgcgatctcggctcactgcaa------cct-ccaggtttaagagattctcctgcctta-gctccccgagtagctgggattacaggcgcctgccaccatgcccggctaatttttttgtagttttagtagagacggtgttttaccatgttgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103618082 211 + 192599291 GATTAt------------------------------------ttat--ttat-----------ttatttg-----agaaggagtttcgc-tcttgttgcccaggctggagtgcagtggtgcgatctcggcccactgcaatctccgcct-ccaggttcaagagattctcctgcctta-gcctcctgagtagctgggattacaggcgcctgccaccatgcccggctaatttttttgtagttttagtagagacgggggtgcaccatgttgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103261634 211 - 192460366 GATTAt------------------------------------ttat--ttat-----------ttatttg-----agaaggagtttcgc-tcttgttgcccaggctggagtgcagtggtgcgatctcggcccactgcaatctccgcct-ccaggttcaagagattctcctgcctta-gcctcctgagtagctggaattacaggcgcctgccaccatgcccggctaatttttttgtagttttagtagagacggggtttcaccatgttgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101053653 216 + 187378091 gattat------------------------------------ttat--ttat-----------ttatttatttatttgaggagtttcgc-tcttgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaatctccgcct-ccaggttcaagagattctcctgcctta-gcctcctgagtagctgggattacaggcgcctgccaccatgcccggctaatttttttgtagttttagtagagacggggtttcaccatgttgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4920255 208 + 91754291 GATTAt------------------------------------ttat--ttat-----------ttatttg--------aggagtttcgc-tcttgttgcccaggctggagtgcagtggtgcgatctcggctcactgaagtctccgcct-ccaggttcaagagattctcctgcctta-gcctcccgagtagctgggattacaggcgcctgccaccatgcccggttaatttttttgtagttttagtagagacggggtttcaccatgttgg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92399864 214 - 98464013 GATTAtttgt--------------------------------ttac--ttat-----------ttatttg-----agacagagtttcgc-tcttgtcgcgccggccggagtgcagtggcgcaatcccagctcactgcaacctccgcctcccaggttcaagccattctcctgcctca-gcctcccgagtagctgggactacaggtgttcgccacgaggcccggctaa--tatttgtatttttcgtagagatggggtttcaccatgttgg i calJac3.chr15 C 0 C 0 e canFam3.chr34 24778288 0 - 42124431 C a score=254059.000000 s hg38.chr3_KI270781v1_alt 41504 97 + 113034 ccaggctgctctcgaactcctgacctcaggcgatctgtccgcctcgg-cctcccaaagt-gctgggattacaggagctagctaccgcaccc-ggccTATT s panTro4.chr3 13790781 97 - 202329955 ccaggctgctctcgaactcctgacctcaggcgatccgtccgcctcgg-cctcccaaagt-gctgggattacaggcgctagctaccgcgccc-ggccTATT i panTro4.chr3 I 578 C 0 s ponAbe2.chr3 13773065 100 - 202140232 ccaggctgctctcgagctcctgacctctggcgatccgtccgcctcagccctcccaacgtggctgggattacaggcgctagccaccccgccctggccTATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14324834 97 - 123690457 ccaggctgccctcgaactcctaacctcaggcgatccgtccgcctcgg-cctcccaaagt-gctgggattacaggcttgagccactgcgccc-ggccTATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103618293 97 + 192599291 ccaagctgctcttgaactcctgaccgccggcgatccgttcgcctctg-cctcccaaaat-gctgggattacaggcgcgagccacggcgctc-ggccTATT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103261845 97 - 192460366 ccaagctgctcttgaactcctgacctcaggcgatccgttcgcctctg-cctcccaaaat-gctgggattacaggcgcgagccacggcgctc-ggccTATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101053869 97 + 187378091 ccaagctgctcttgaactcctgacctcaggcgatccgttagcctctg-cctcccaaagt-gctgggattacaggcgcgagccacggCGCTC-GGcctatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4920463 97 + 91754291 ccaagctgctcttgaactcctgacctcaggcgatccgttcgcctctg-cctcccaaagt-gctgggattacaggcgcgagccacggcgctc-agccTATT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92400078 90 - 98464013 tcaggctggtctcgaacccctcacctcaggtgatccacccacctcag-cttcccaaagt-cctggaattacaggc-------accgtacct-ggccTATT i calJac3.chr15 C 0 C 0 e canFam3.chr34 24778288 0 - 42124431 C a score=946017.000000 s hg38.chr3_KI270781v1_alt 41601 341 + 113034 GATTATTTTTAAATTTGAAATCAAAATAT--GAAGTTTGCAAAGGGCACGGAATTAGCCGGTATACT-G--GGGAGCG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCCGGCAGAGTCCGCGACA-CACCAAGGCC-A-TGT-CTTGTT-AAAAAGGGGGTTC-TGGCCTGAGAATGGCTGGGGAGCCT------GGGCCCGGCACCCCTGCCCGCGTCCCT-----CTCCCCTAGGGTGTTGACGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCACCTCTGCCTA----------------------------------------------------------------GCGCGATTTCCAGAGCTAGCGCCCGAGGGAGGAGCGCGCGC---CACCCCGCCGCCCTGACAGA-------------------------------------GCTTGGGAGAGGGTCCCC s panTro4.chr3 13790878 341 - 202329955 GATTATTTTTAAATTTGAAATCAAAATAT--GAAGTTTGCAAAGGGCACGGAATTAGCCGGTATACT-G--GGGAGCG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCCGGCAGAGTCCGCGACA-CACCACGGCC-A-TGT-CTTGTT-AAAAAGGGGGTTC-TGGCCTGAGAATGGCTGGGGAGCCT------GGGCCCGGCACCCCTGCCCGAGTCCCT-----CTCCCCTAGGGTGTTGAGGCGG-----------------AGGCTGCGGGCGCGGACACAAGCCCACCTCTGCCTA----------------------------------------------------------------GCGCGATTTCCCGAGCTAGCGCCCGAGGGAGGAGCGCGCGC---CACCCCGCCGCCCTGACAGC-------------------------------------GCTTGGGAGAGGGTCCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13773165 336 - 202140232 GATTATTTTTAAATTTGAACTCAAAACAT--AAAGTTTGCCAAGGGCACGGAATTAGCCAGTGTACTGG--GGGAGTGC-----------------CAAGGGGCCCAGTTCTTGCCAGACTGTCCCCGGCAGACTCCGCGACACCACCACGGCC-A-TGTACTTGTT-AAAAAGGAGGTTCTTGGCCTGAGAATGGCT-----------------GCCCGGCACCCTAGCCCGCGTTCCT-----CTCCCCTAGGGTGTTGAGGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCACCTCTGCCTA----------------------------------------------------------------GCGCGATTTCCCGAGCTGGCGCCCTAGGGAGGAGCGTGCGC---CACCCCGCCGCCCTTACAGC-------------------------------------GCTTGGGAGAGGGTCCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14324931 359 - 123690457 GATTATTTTTAAATTTGAAATCAAAATAT--AAAGTTTGCCAAGGGCACGGAATTAGCCGGTATACT-G--GGGAGTGTTCTCCTTGTTCATTCCACAAGGAGCCCAGTTC-TGCCAGACTGTCCCCGGCAGATTCCGCGACA-CTCCACGGCC-A-TCT-CTCGTT-AAAAAGGGGATTC-TGGCCTGAGAATGGCTGGGGAGCCT------TGGCCTGTCACCCCTGCCCGCGTCCCT-----CTCCCCTAGGGTGTTGAGGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCACCTCTGCCTA----------------------------------------------------------------GCGCGATTTCCTGAGCTGGCGCCCAAGGGAGGAGCGCGCGC---CACCCCGCCGCCCTGACAGC-------------------------------------GCTTGGGAGAGGGTCCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103618390 342 + 192599291 GATTATTTTTATATTTGAAATCAAAATAT--AAAGTTTGCCAAGGGCACGGAATTAGCCGATATACT-G--GGGAATG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCTGGTAGAGTCCGCTACA-CACCACGGCC-A-TCT-CTTGTTAAAAAAGGGGGTTC-TGGCCTGAGAATGGCTGGGGAGCCT------GGGCCCGGCACCCTTGCTCGCGTCCCT-----CTCCCCTAGGGTATTGAGGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCGTCTCTGCCCA----------------------------------------------------------------GAGCGATTTCCTGAGCTGGCGCCCTAGGGAGGAGCACGCGC---CACCCCGCCGCCCTGACAGC-------------------------------------GCTTGGGAGAGGGTCCCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103261942 342 - 192460366 GATTATTTTTATATTTGAAATCAAAATAT--AAAGTTTGCCAAGGGCACGGAATTAGCCGATATACT-G--GGGAATG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCTGGTAGAGTCCGCTACA-CACCACGGCC-A-TCT-CTTGTTAAAAAAGGGGGTTC-TGGCCTGAGAATGGCTGGGGAGCCT------GGGCCCGGCACCCTTGCTCGCGTCCCT-----CTCCCCTAGGGTATTGAGGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCGTCTCTGCCCA----------------------------------------------------------------GAGCGATTTCCTGAGCTGGCGCCCTAGGGAGGAGCACGCGC---CACCCCGCCGCCCTGACAGC-------------------------------------GCTTGGGAGAGGGTCCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101053966 342 + 187378091 gattatttttatatttgaaatcaaaatat--aaaGTTTGCCAAGGGCACGGAATTAGCCGATATACT-G--GGGAATG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCTGGTAGAGTCCACTACA-CACCAGGGCC-A-TCC-CTTGTTAAAAAAGGGGGTTC-TGGCCTGAGAATGGCTAGGGAGCCT------GGGCCCGGCACCCTTGCTCGCGTCCCT-----CTCCCCTAGGGTGTTGAGGCGG-----------------AGGCTGCGGGTGCGGACACAAGCCCATCTCTGCCCA----------------------------------------------------------------GAGCGATTTCCTGAGCTGGCGCCCTAGGGAGGAGCGCGCGC---CACCCCGCCGCCCTGACAGC-------------------------------------GCTTGGAAGAGGGTCCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4920560 346 + 91754291 GATTATTTTTATATTTGAAATCAAAATAC--AAAGTTTGCCAAGGGCACGGAA--AGCCGATATACT-G--GGGAACG------------------CAAGGAGCCCAGTTC-TGCCAGACTGTCCCTGGTAGAGTCCGCTACA-CACCACGGCC-A-TCT-CCTGTTAAAAAAGGGGGTTC-TGGCCTGAGAATGGCTGGGGAGCCTGGGCCCGGGCCCGGCACCCTTGCTCGCGTCCCT-----CTCCCCTAGGATGTTAAGGCGG-----------------AGGCTGCGGGTGCGGACATAAGCCCATCTCTGCCCA----------------------------------------------------------------GAGCGATTTCCTGAGCTGGCGCCCGAGGGAGGAGCGCGCGC---CACCCCGCCGCCCTGACTGC-------------------------------------GCTTGGGAGAGGGTCCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92400168 413 - 98464013 GATTATTTTTAAATTTGAAAGCAAAATA---AAAGTTTGCCAAGGGCACGGAATTAGCCAGTATACT-G--GTGAGTG------------------CAAGGAGCCCAGTTC---------TGTCCCCCGCAGAGTTCGCTACA-CTCCATGGCCGG-CCT-ATTGTT-AAAAAGGGTGTTC-TGGCCTGAAAGTAGCTGGGGAGC----------------------TGCCCGCGTCCCT-----CTCCCCTAAGGTACTGAGGCGG-----------------AGGCTGTGGACGCGG-----AGCCCGCCTCTATCCAGCGGAGCGGGCTGCGGGGTGCGCACGCGGAGCCCTGGAGGAGCCAACACAGCAACGGTGCGAGCGCGCGATTTCCTGAGCTGGCGCCCTTGGGAGGAGCACGGGC---CACCCCGCCGCCAGGACAGCGCCGCACCTTTTGTTCCAGCCCTGACCCCAACTTGAGGCTTGGGAGAGGACCCCC i calJac3.chr15 C 0 I 440 s canFam3.chr34 24778288 358 - 42124431 GATTTTTTTTAA---TGACAGCAAAATTTTAAAAGTTTGCCAAGAGCACAAAACTGGCTGGTAAACC-GTAAGGAATG------------------CGAGGAGCCCAAGTC-CGCCAGGTTGTCCTC-----------CCACC-CTCCACTGCC-ACCCT-CTCATT----AAAGGGCTTC-TTGCC-------------AGAGCCT-------GGCCCCACAGCCCTGCGTGCATCCCTCCCTGCCCTGCTGGGGGGCTCACCCGACCCCCCAGCTCCGCCCCAGGCCAGGGGCTCCG--AGGAGTCTGGAGCTGGGGA----------------------------------------------------------------GCG-GATTTCCTAATTTG--CCCCCAGGGAGGAGCGCGCGCCCACGCCCTGTGGCCGGGCGGGC--CGCACCTTCACTTCCAGCCTCCC------------GCCTGGGAGGGGGCCAGG i canFam3.chr34 C 0 C 0 a score=3593348.000000 s hg38.chr3_KI270781v1_alt 41942 1206 + 113034 AGGACTTGGCGTACCCGTCCGTCCTGGGGCTGCTGCTGTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGA---------AGGCTGAGC---------GCAGCGC---TCCGTGTGGGTGCCCTAGTGAGGCCTCAGCCCCACTGCGCCTTCTTCCTTCACGT-GGGCAGG------------AGAAGGACCCGACT-GGTACTTGGTGAGCAGAGGTTCGCACACCCGATATGGGAAAAGGAAGAGGGAAAACAGATGAATCACTGAGGGCTGGACTGA-TTCAGTCATTTGTGCACGGAGTAAATATTTATTTCGCA---TTTTTAAAGCTCTTGACAGGCAACagcaaaccaatcaaaa--gtccccg-ccctcatgg-acctggggtggaggtatggttggataaaaaataaacaatgaacttactaaatcatatattaATGATTAGCCCTAAGTAATCTAAACTACCTCCTCCCACATTCTTAAAAGCAACACTTCTTTGACAAGTTGGTCTTCATCATGC-ACCCAGGCACAGCAAGTGGCAAAAGTATGCCGAGATGGAGAGGGTATGTCGTTGGGAAACAATGCTTACATATGTAGCTAA--TTTTTTTTTTATT---------------------------------------------TATGAAGCAGCATTTATCTTAATCATTGGGGCGTCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTTAGTTTCATTCTGCAAGGTCATAAAAACACTTTTATCCACTCATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAGAACAAATGATAGGGATACATGAGTGTCCTAAATGAGCATAACAAGACCTAATAATGCCCAGACAATAGTATCCTATATGACAAAGGGGATCAAAGCCAGAGTCCGGAAGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGTAAAGCAGAATAGCTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGTGGGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGT-------AGCAATCTACCAG--------G-ATTTAGGATTTAGCCCTAGGCAGGGTCATGATCAGAAAATTGTTATCAATGatcctaccaaattcaatacccac---tttttgtagcaaatgctttgcaaag s panTro4.chr3 13791219 1206 - 202329955 AGGACTTGGCGTACGCGTCCGTCCCGGGGCTGCTGCTGTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGA---------AGGCTGAGC---------GCAGCGC---TCCGTGTGGGTGCCCTAGTGAGGCCTCAGCGCCACTGCGCCTTCTTCCTTCACGT-GGGCAGG------------AGAAGGGGCCGACT-GGTACTTGGTGAGCAGAGGTTCGCACACCCGATATGGGAAAAGGAAGAGGGAAAACAGATGAATCACTGAGGGCTGGACTGA-TTGAGTCATTTGTGCAGGGAGTAAATATTTATTTAgca---tttttaaagctcttgacaggcaacagcaaaccaatcaaaa--gtccccg-ccctcatgg-acctggggtggaggtacggttggataaaaaataaacaatgaacttactaaatcatatattaATGATTAGCCCTAAGTAATCTAAACTACCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGACAAGTTGGTCTTCATCATGC-ACCCAGGCACAGCAAGTGGCAAAAGTATGCCGAGATGCAGAGGGTATGTCGTTGGGAAACAATGCTTACATATGTAGCTAA--TTGTTTTTTTATT---------------------------------------------TATGAAGCAGCATTTATCTTAATCATTGGGGCATCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTCGTTTTTGAAAAGTAAGAAAGGATGTTAGTTTCATTCCGCAAGGTCATAAAAACACTTTTATCCACTCATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAACAAATGATAGGGATACATGAGTGTCCTAAATGAGCATAACAAGACCTAATAATGCCCAGACAATAGTACCCTATATGACAAAGGGGATCAAAGCCAGAGTCCGGAAGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGTAAAGCAGAATAGCTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGTGGGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGT-------AGCAATCTACCAG--------G-ATTTAGGATTTAGCCCTAGGCAGGGTCATGATCAGAAAATTGTTATCAATGatcctaccaaattcaatacccaa---tttttgtagcaaatgctttgcaaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13773501 1217 - 202140232 AGGACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTGTCCTTAGAGCCTGAGGAGGTACCGGGTCCAGA---------AGGCTGAGC---------GCAGCGC---TCCGCGTGGGTGCCCTAGTGAGGCCTCAGCGCCACTGCGCCTTCTTCATTCACGTGGGGGGGG------------AGAAGGGGCCGACT-GGTACTTGGTGCGCAGAGGTTCGCACACCCGATATGGGAAAAGGAAGAGGGAAAACAGATGAATCACTGAGGGATGGACTGATTTCAATCatttgtgcacggagtaaatatttattttatgcattttttaaagctcttgacaggcaacagcaaaccagttcaaacgttccccgcccctcatggaacctggggtggaggtatggttggataaaaaataaacaatgaacttactaaatcatatattaATGATTAGCCCTAAGTAATCTAAACTACCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGACAAGTTGGTCTTCATCATGCGACCCAGGCACAGCAAGTGGCAAAAGTATGCTGAGATGGAGAGGGTATGTCGTCGGGAAACAATGCTTACATATGTAGCTAA-TTTTTTTTTTTATT---------------------------------------------TATGAAGCAGCATTTATCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTTAGTTTCATTCCACAAGGTCATAAAAACACTTTTATCCACTCATTTACTTTAACATTTCCTGCAACACGATTGAGATGCCAGAATTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAATAAATGATAGGGATATACGAGTGTCCTAAATGAGCATAACAAGACC---TAATGCCCAGACAATAGTACCCGATATGACAAAGGGGATCAAAGCCAGAGTCCGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGTAAAGCAGAATAGTTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGCGGGGTGATTTAATACTAATCGATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGCAAAATGT-------AGCAATCTACCAG--------GCATTTAGGATTTAGCCCTAGGCAGGGTAATGATCAGAAAATTGTTATCAATGatcctaccaaattcaatacccac--ttttttgtagcaaatgctttgtaaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14325290 1185 - 123690457 AGGACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTGTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGA---------AGGCTGAGC---------GCAGCGC---TCTGCGTGGGTGCCCTAGTGAGGCCTCAGCGCCACTGCGCCTTCTTCCTTCACGT-GGACGGG------------AGAAGGGGCCGACT-GGTACCTGGTGCTCAGAGGTTCGCACACCCGATATGGGAAAAGGAAGAAGGAAAACAGATGAATCACTGAGGGATGGACTGA-TTCAGTCATTTGTGCACGGAGTAAATATTTATTTAGCA---TTTTTAAAGCTCTTGACAGGCAACAGCAAACCAATCAAAT--GTCCCCG-CCCTCAGGG-ACCTGGGGTGGAGGTATGGTTGGATAAAAAATAAACAATGAACTTACTAAATCACATATTAATGATTAGCCCTAAGTAATCTAAACTACCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGACAAGTTGGTCTTCATCATGC-ACCCAGGCACAGCAAGTGGCAAAAGTATGCCGAGATGGAGAGGGTATGTCGTCGGGAAACAATGCTTATATATGTAGCTAA----TTTTTTTTATT---------------------------------------------TATGAAGCAGCGTTTATCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTAGTATTTGAA----AAGAAAGGATGTCAGTTTCATTCCACAAGGTCGTAAAAACACTTTTATCCACTCATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAACTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAACAAATGATAGGGATACATGAGTGTCCTAAATGAGCATAACAAGACC---TAATGCCCAGACAATAGTACCCTATATGACAAA------------CAGAGTCCGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCACTTTTCTTAAGCTGCAAAGCAGAATAGTTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGCGGGGTGATTTAATACTAATCAATCATTTAAGCGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGT-------AGCAATCTACCAG--------G-ATTTAGGATTTAGCCCTAGGCAGGGTCATGATCAGAAAATTGTTATCAATGatcctaccaaattcgatacccat---ttttcgtagcaaatgctttgtaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103618732 1257 + 192599291 AGAACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTCTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGG---------AGGCTGAGC---------GCAGCGC---TTCACGTGGGTGCCCTAGTCAGGCCCCAGCGCCGCTGCGCCTTCTTCCTTCAAGT-GGGCGGG------------AGAGGGGGCCAACTGGGTACTTGGTGCTCAGAGGTTCGCACACCCGATATGGGGAAAGGAAGAGGAAAAACAGATGAATCACTGAGGGATGGACTGa-ttcagtcatttgtgcatggagtaaatatttatttgaca---tttttaaagctcttgacaggcaacagcaaaccaatcaaac--gtccccg-ccctcatgg-acctggggtggaggtgtggttggataaaaaataaacaatgaacttattaaatcatatattaATGATTAACCCTAAGTAATCTAAACTGCCTCCTCCCACACGCTTAAAAGCAACACTTCTTTGACCAGTTGGTCTTCATCATGC-ACCCAGGCATAGCAAGTGACAAAAGTATGCCGAGATGGAGAGGGTATGTCCTCGGGAAACAATGCTTACATATGTAGCtaatttttttttttttttttttaatGAAGCAGCATTGTCTTAATCtttttttttttttttttaaatGAAGCAGCA-TTGTCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCTTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTCAGTTTCATTCCGCAAGGTCATAAAAGCACTTTTATCCACTGATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAACAAATGATAGCAATACATGAGTGTCCTAAATGAGCATAGCAAGACC---TAATGCCCAGACAATAGTACCCTATATGACAAAGGCGATCAAAGCCAGAGTCTGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGCAAAGTAGAATAGTTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGCGGGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGTAGCAATAAGCAATCTACCAG--------A-ATTTAGGATGTAGCCCTAGGCAGGGCCATGATCAGAACATCATTAGCAATGatcctaccaaattcaatacccac---tttttgtagcaaatgctttgtaaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103262284 1212 - 192460366 AGAACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTCTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGG---------AGGCTGAGC---------GCAGCGC---TTCACGTGGGTGCCCTAGTCAGGCCCCAGCGCCGCTGCGCCTTCTTCCTTCAAGT-GGGCGGG------------AGAGGGGGCCAACTGGGTACTTGGTGCTCAGAGGTTCGCACACCCGATATGGGGAAAGGAAGAGGAAAAACAGATGAATCACTGAGGGATGGACTGA-TTCAGTCATTTGTGCATGGAGTAAAtatttacttgaca---tttttaaagctcttgacaggcaacagcaaaccaatcaaac--gtccccg-ccctcatgg-acctggggtggaggtgtggttggataaaaaataaacaatgaacttattaaatcatatattaATGATTAACCCTAAGTAATCTAAACTGCCTCCTCCCACACGCTTAAAAGCAACACTTCTTTGACCAGTTGGTCTTCATCATGC-ACCCAGGCATAGCAAGTGACAAAAGTATGCCGAGATGGAGAGGGTATGTCCTCGGGAAACAATGCTTACATATGTAGCTAATTTTTTTTTTTTTTT---------------------------------------------AATGAAGCAGCA-TTGTCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCTTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTCAGTTTCATTCCGCAAGGTCATAAAAGCACTTTTATCCACTGATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAACAAATGATAGCAATACATGAGTGTCCTAAATGAGCATAGCAAGACC---TAATGCCCAGACAATAGTACCCTATATGACAAAGGCGATCAAAGCCAGAGTCTGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGCAAAGTAGAATAGTTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGGGCGGGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGTAGCAATAAGCAATCTACCAG--------A-ATTTAGGATGTAGCCCTAGGCAGGGCCATGATCAGAACATCATTAGCAATGatcctaccaaattcaatacccac---tttttgtagcaaatgctttgtaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101054308 1216 + 187378091 AGGACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTCTTCTCAGAGCCTGGGGAGGTACCGGGTCCAGC---------AGGCTGAGC---------GCAGCGC---TCCGCGTGGGTGCCCTAGTCAGGCCCCAGCGCCGCTGCGCCTTCTTCCTTCAAGT-GGGCGGG------------AGAGGGGGCCGACT-GGTACTTGGTGCTCAGAGGTTCGCACACCCGATatggggaaaggaagaggaaaaacagaTGAATCACTGAGGGATGGACTGA-TTCAGTCATCTGTACAtggagtaaatatttatttaaca---tttttaaagctcttGACAGGCAACAGCAAACCAATCAAAC--GTCCCCG-CCCTCATGG-ACCTGGGGTAGAGGTGTGGttggataaaaaataaacaatgaactTATTAAATCATATATTAATGATTAGCCCTAAGTAATCTAAACTGCCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGACCAGTTGGTCTTCATCATGC-ACCCAGGCATAGCAAGTGACAAAAGTATGCCGAGATGGAGAGGGTATGTCCTCGGGAAACAATGCTTACATatgtagctaattttttttttttttt----------------------taatt------------------tatgaagcAGCA-TTGTCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTCAGTTTCATTCCACAAGgtcataaaaatacttttatccaCTGATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCAcacatctgaaaaacaaatgatAGCGATACATGAGTGTCCTAAATGAGCATAGCAAGACC---TAATGCCCAGACAATAGTACCCTATATGACAAAGGCGATCAAAGCCAGAGTCTGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGCAAAGTAGAATAGTTTGTTCTGTATTTAGTTTGAGGGCAATTTGGGCATGGGAAGGGCGGGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATGTAGCAATAAGCAATCTACCAG--------G-ATTAAGGATGTAGCCCTAGGCAGGGCCATGATCAGAACATCATTAGCAATGATCCTACCAAATTCAATACCCAC---TTTTTGTAGCAAATGCTTTGTAAAG i papAnu2.chr2 C 0 I 183 s chlSab2.chr15 4920906 1213 + 91754291 AGGACTTGGCGTACCCGCCCGTCCTGGGGCTGCTGCTGTCCTCAGAGCCTGGGGAGGTACCGGGTCCAGG---------AGGCTGAGC---------GCAGCGC---TCCGCGTGGGTGCCCTAGTCAGGCCCCAGCGCCGCTGCGCCTTCTTCCTTCAAGT-GGGCGGG------------AGAGGGGGCCGACT-GGTACTTGGTGCTCAGAGGTTCCCACACCCGATATGGGGAAAGGAAGAGGAAAAACAGATGAATCACTGAGGGATGGACTGA-TTCAGTCATTTGTGCATGGAGTAAATATTTATTTAACA---TTTTTAAAGCTCTTGACAGGCAACagcaaaccaatcaaac--gtccccg-ccctcatgg-acctggagtggaggtgtggttggataaaaaataaacaatgaacttattaaatcatatattaATGATTAGCCCTAAGTAATCTAAACTGCCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGATCAGTTGGTCTTCATCATGC-ACCCAGGCATAGCAAGTGACAAAAGTATGCCGAGATGGAGAGGGTATGTCCTCGGGAAACAATGCTTACATATGTAGCTAAttttttttttttttt-------------------------tt------------------tATGAAGCAGCA-TTGTCTTAATCATTGGGGCTTCTCAGAATTTCCTAAGTGCCTATTCCTCCCTTTTAAAGCAGCTAGTTTTTGAAAAGTAAGAAAGGATGTCAGTTTCATTCCACAAGGTCATAAAAACACTTGTATCCACTGATTTACTTTAACAGTTCCTGCAACACGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAACAAATGATAGCGATACATGAGTGTCCTAAATGAGCATAGCAAGACC---TAATGCCCAGACAATAGTACCCTATATGACAAAGGCGATCAAAGCCAGAGTCTGGAGGACAAGACTGACCTGGAGCAGTCCCTCCCTACTCATTTTTCTTAAGCTGCAAAGTAGAATAGTTTGTTCTGTATTTAGTTTGAGGACAATTTGGGCATGGGAAGTGCGGGTTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAACCTTACCTTCACAAGCAGGATTTCTATGC-AAATATAGCAATAAGCAATCTACCAG--------G-ATTTAGGATGTAGCCCTAGGCAGGGCCATGATCAGAACATCGTTAGCAATGatcctgccaaattcaatacccac---tttttgtagcaaatgctctgtaaag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92401021 1150 - 98464013 AGGACTTGGCGCACCCGCCAGTCCTGGGGCTGCTGCTGTCCTCAGAGCCTAGGGAGGTACCGGGTCTGGG---------AGGCTGCGC---------GCTGCGC---TCCGCGTGGGTGCCCTAG-CAGGCCCCAGCACTGCTGCGCCTTCTTCCTTCACGT-GGGCGAGAGGGAGAGCCGCAGGGAGGGCCGACG-GGTACTTAATGCTCAGA-------------GATATTGGAAAAGGAGGAAGGAAAACAGATGAATCACTGAGGGATGGGCTGA-TTCAGTCATTTGTGCGTGGGGTAAATATTTATTTAgca---ttttctacgctcttgagaggcaacagcaaaccaaacaaac--gtccctg-ccctcacgg-acctggggtggaggtgtggtttgat-aaaaataaacaatgaacgtattaaatcatatattaATGGTTAGCCCTAAGTAATCTGCACTGCCTCCTCCCACACTCTTAAAAGCAACACTTCTTTGACCAACAGCTCTTCATCCTGC-GCCCAGACACAGC-AGTGGCAATGGTATGCCGAGATGGAGAGGGTGTGTCGTTGGGAAACAATGCTTACATATGTAGCTCA--ATTTCTTCCCATT---------------------------------------------TATGAGGTAGCATTTATCTTCATCATTGGGGCTTCTCA-----TCCTAAGTACCTATTCCTCCCTTTTAAAGCAGCTAGTTTTTAAAAAGTGAGAAAGTATGTCAGTTTCATTCCGCAAGGTCATAAAAACACT--TGTCCCCTCA-----TTTAACAGTTCCTGCAACTCGATTGAGATGCCAGAAGTGCTGG--------CAGAAGAAAAAGCACACATCTGAAAAAC--------------------------AAACGGGCATAACAAGACC---TAATGCCCA------------------GACAAAGGGGATCCAAGCCAGAGT-TGGGGCATGAGACCCGCCTGGAGTAGTCCCGCCCTACTCATTTTTCTTGAGCTGCAAAGCAGAATAGTTTGTTCTGTATTCAGTTTGAGGACAATTTGGGCATGGGAAGGGCAAGGTGATTTAATACTAACCAATCATTTAAGTGGCATCCTCAAGCAAAACCTACCTTCACAACCAGGATTTCTCTGC-AAATGT-------GGCAATCTACCTAAATCTACTG-ATTTAGGATTTAGCCCTAGGCAGGGTCATGATCAGAAAATTgttcc---tgatcctaccagattcaacacccacttttttttgtagcaaatgcttcataaag i calJac3.chr15 I 440 C 0 s canFam3.chr34 24778646 864 - 42124431 AGGAGGTGACGCACCTGCCCCTCCTGGGTC-ACCAGTGTCCTCCAGGCCTGGAAGGACACCAGATCGGGGACGACCCATAGGCTGTGCTGGGAAGGTGTCCCGCGGGTCCGCGTGGGTACCAGGGTGAGGCCCTGGCGCGCCCCAGTGTCCTTCTCCCACCA-TCGCCGG------------GGCCAGGGCCAACT-GGCCCTTGGAACTCACAAGGTCACACACCTGA------------AGCCAGGGAGATGGATGACTCATCGATTGATTGATTGA-TTCACCCAGT----CAGCGCAAAAGTGTCTCTCTAGCA---CCTGGTAAGCACTTGA-----ATCCATGAACAAAACCAAG--ATTTCTG-TCCT-GCAG-ACCTGGGATGGGGG-GTGGTTGTTTAGAAAATAAGCAATGACCTTGTAAGAGCATGTACTGATATTTAGTCCTAAGTAATTTAAACCAACTCCT-ACACTCTATTAAAAGCAAAATTCCCTTGACAAGT--------------C-----------------------------------------------------------------------------GCTGG--------------T----------------------------------------------------------TTAACTTAAT--------------------------------------------------AGCCAGTTCCTG-------------------------------------------------------------------------------GCAGGATGGCTGAGGTGCCAGATGTGGTGACCGACAGTCAGAAGAAAAAGCACACAACTGAAAGGCAAATGATAGGGATGCATGAAGATCCTTAGTGGAAACAACAAGGCT---TAATGCCCCAACAATACCGCCCAGTGTATCCAA------TTAACAGGGAAGCGTGAGACCATGAC-------------------------------------------------AATAGTTTGCTGTGTATTTAGTGTGAGAACTTTTTTTTTTT-------TTTTTGTAATTTGACACCAGGCACACATTTAAGCAGCATTTTACA--CAGCCCTACATTTACACACAG---------GC-AA-----------AACTACACGCCAT--------G-GTT-------TACCTGTAGGCAGGGTCAAGTTCAGAA-ATTTCTATCCGTGGTcctaccaaattcaatgccc-----tctttgta------------taaag i canFam3.chr34 C 0 C 0 a score=2783331.000000 s hg38.chr3_KI270781v1_alt 43148 850 + 113034 cccatttacta--tcttgaaatgg-aattcatagataatataatctatctgtatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaacgcctccc-agccaaagaccct-tgggaacacacttgcagttgaaca-agttcagtttattgcacattgcaaggagg------------------gagaatgcacgccac-ggggaaatgcaggatgtcttggtaagagggtattagaaaggacttactatcggatttagggtttg-ggg---ggcagcttttggaaagatttgtgaaagcggtgctttgctttggattggatgctg-tcaagaa-gtgggagcagttctatggttgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcctattagccaggatacggggaggtttggtcatctctgtggtttggagaatgttcatgttttgtctatgttcagacgtgatta-gggaatgttcttgtttttatctagagccatccccatctgggtggccttatccaataccggtgttctgtggaattgtttacatgtaacag-aaaaaccccacaagtg-----agtgccaagccaactT--GGG-TGTCAGGGACTGCTT-----TTTCTCACACTc----tgtcat-aaaaggagaaatgaaa-tgatc-ataacaaaataatatgcatcttcatatgtaaatgatccagaacagttttactagaatacataataga-tcatatggttgca-----------TGAGTCAGTTTGGATTT-AGAAGTAAGAATATTGAAAGCATTTCTTTAC-ACAAATACTGAAGAATGAAAGACAAGAGGTTCCAGTTAACATCAGAATTAAAATTAG s panTro4.chr3 13792425 852 - 202329955 cccatttgcta--tcttgaaatgg-aattcatagataatataatctatctatatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaacgcctccc-agccaaagaccct-tgggaacacacttgcagttgaaca-agttcagtttattgcacattgcaaggagg------------------gagaatgcacgccac-ggggaaatgcaggatgtcttggtaagagggtattagaaaggacttactatcggatttagggtttg-ggg---ggcagcttttggaaagatttgtgaaagcggtgctttgctttggattggatgctg-tcaagaa-gtgggagcagttctatggctgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcctattagccaggatacggggaggtttggtcatctctgtggtttggagaatgttcatgttttgtctatgttcagacgtgatta-gggaatgttcttgtttttatctagagccatccccatctgggtggccttatccaataccggtgttctgtggaattgtttacatgtaacag-aaaaaccccacaagtg-----agtgccaagccaactcccggg-tgtcagggactgctt-----ttTCTCACACCc----tgtcat-aaaaggagaaatgaaa-tgatc-ataacaaaataatatgcatcttcatatgtaaatgatccagaacaactttactagaatacataataga-tcatatggttgca-----------TGAGTCAGTTTGGAATT-AGAAGTAAGAATATTGAAAGCATTTCTTTAC-ACAAATACTGAAGAATGAAAGACAAGAGGTTCCAGTTAACATCAGAATTAAAATTAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13774718 865 - 202140232 cccatttactaatccttgaaatggaaattcatagataatataacctatctatgtacataattccaaaa--------------------------aaaCATCATTT---ATATCtatcaacacctcccaagccgaagaccctaggggaacacacttgcagttgaacacagttcagtttattgcacattgcaaggagg----------------------atgcacgccacgggggaaatgcaggatgtcttggtaagaggttattagaaaggacttactatcggatttagggtttg-ggg---ggcagcttttggaaagatttgtgaaagcggtgctttgctttggattggatgctgttcaagaaggtgggagcagttctatggttgggt-attttaattagcttcatctagaacggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcatattagccaggatacggggaggtttggtcatctctgtggtttgaagaatgttcatgttttgtctatgttcagacgtgattatgggaatcttcttgtttttatctagagccatccccatctgggtggccttatccaataccgatgttctgtggaattgtttacatgtaacag-aaaaaccccacaagtg-----agtgccaagccaactcATGAGCTGTCAGGGACTGCTT-----TTTCTCACACCCT---tgtcat-aaaaggagaaatgaaa-tgatc-ataacaaaataatatgcatcttcatatgtaaatgacccaaaacaactttactagaatacataataga-tcatatggttgca-----------TGAGTCAGTTTGGATTTGAGAAGTAAGAATATTGAAAGCATTTCCTTAC-ACAAATACTGAAGAATGAAAGACAAGAGGTTCCAGTTAACATCAGAATTAAAATTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14326475 870 - 123690457 cccatttacta--tcttgaaatgg-aattcatagataatataatctatctacatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaatgcctccc-agccaaagaccct-caggaacacacttgcatttgaaca-agttcagtttactgcacattgcaaggagggagaatgcatgccggagggagaatgcacgccac-ggggaaatgcaggatgtcttggtaagagggtattaaaaaggacttactattgggtttagggttta-ggg---ggcagcttttggaaagattcgtgaaagcggtgctttgctttgaattggatgcca-tcaagaa-gtgggagtagttctatggttgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgagaaagcagcagtcactcatattagccaggataaggggacgtttggtcatctctgtgg-ttggagaatgttcatgttttgtctatgttcagacgtgatta-gggaatgttcttgtttttatctacagccaatcccatctgggtggccttatccaataccggtgttctgtggaattgtttacatgcaacagaaaaaatcccacaagtg-----agtgccaagccaactcctggg-tgtcagggactgctt-----ttTCTCACACCc----tgtcat-aaaaggagaaatgaaa-tgagc-ataacaaaataatatgcatcttcatatgtaaatgatccagaacaactttactagaatacataatgga-tcatatggttgca-----------TGAGTCAGTTTGGATTT-AGAAGTAAGAATATTGAAAGCGTTTCCTTAC-ACAAATACTGAAGAATGAAAGACAAGAGGTTCCAGTTAACAGTAGAATTAAAATTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103619989 847 + 192599291 cccatttacta--tcttgaaatgg-aattcatagataatataatctatctacatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaacgcctccc-agcc-----tcct-tgggaacacacttgccgttgaaca-agttcagtttattgtacattgcagggagg------------------gagaatgcaggccac-agggaaatgcaggatgtcttggtaaaagggtattagaaaggacttactgtaggatttagggttta-ggg---ggcagcttttggaaagattcatgaaagcgatgctttgctttggattggatgcca-tcaagaa-gtgggagtagttctatggttgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcatattagccaggatagggggaggtttggtcatctctgtggtttggagaatgttcatgttttgtctatgttcagacgtgatta-gggaatgttcttgtttttatctagagccattcccatctgggtggccttatccaatactggtgttctgtggaattgtttacatgcaacag-aaaaaacccataagtg-----agtgccaagccaactccCGGG-GGTCAGGGACTGCTT-----TTTCTCACACCT----tgtcat-aaaaggataaatgaaa-tgatc-ataacaaaataatacgcatcttcatatgtaaatgatccagcacaactttactagaatacataatAGA-TTGTATGGTTGCA-----------TGAGTCAATTTGGGTTT-AAAAGTAAGAATATTGGAAGCATTTCCTTAC-AAAAATACTAAAGAATGAAAGACAAGAGGTTCCAGTCAACATCAGAATGAAAATTAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103263496 847 - 192460366 cccatttacta--tcttgaaatgg-aattcatagataatataatctatctacatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaacgcctccc-agcc-----tcct-tgggaacacacttgccgttgaaca-agttcagttcattgtacattgcagggagg------------------gagaatgcaggccac-agggaaatgcaggatgtcttggtaagagggtattagaaaggacttactgtaggatttagggttta-ggg---ggcagcttttggaaagattcatgaaagcgatgctttgctttggattggatgcca-tcaagaa-gcgggagtagttctatggttgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcatattagccaggatagggggaggtttggtcatctctgtggtttggagaatgttcatgttttgtctatgttcagacatgatta-gggaatgttcttgtttttatctagagccattcccatctgggtggccttatccaatactggtgttctgtggaattgtttacatgcaacag-aaaaaacccataagtg-----agtgccaagccaactcccggg-ggtcagggactgctt-----ttTCTCACACCT----tgtcat-aaaaggataaatgaaa-tgatc-ataacaaaataatacgcatcttcatatgtaaatgatccagcacaactttactagaatacataatAGA-TTGTATGGTTGCA-----------TGAGTCAATTTGGGTTT-AAAAGTAAGAATATTGGAAGCATTTCCTTAC-AAAAATACTAAAGAATGAAAGACAAGAGGTTCCAGTCAACATCAGAATGAAAATTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101055707 847 + 187378091 cccatttaCTA--TCTTGAAATAG-AATTCACAGATAATATAATCTACCTACATACATAATTCC--AA--------------------------AAACATCA-TT---ATATCTATCAACGCCTCCC-AGCC-----TCCT-TGGGAGCGCACTTGCAGTTGAACA-AGTTCAGTTTATTGTACATTGCAGGGAGG------------------GAGAATGCAGGCCAC-AGGGAAATGCAGGATGTCTTGGTAAGAGGGTATTAGAAAGGACTTACTGTAGGATTTAGGGTTTA-GGG---GGCAGCTTTTGGAAAGATTTATGAAAGCGATGCTTTGCTTTGGATTGGATGCCA-TCAAGAA-GCGGGAGTAGTTCTATGGTTGGGT-ATTTTAATTAACTTCATCTAGAA-GGAGGGAAGACTAGAGCCAGGCTAAAGCTATCAATGTGAAAAAGCAGCAGTCActcatattagccaggataggGGGAGGTTTGGTCATCTCTGTGGTTTGGAGAATGTTCATGTTTTGTCTATGTTCAGACGTGATTA-GGGaatgttcttgtttttatctAGAGCCATTCCCATCTGGGTGGCCTTATCCAATACCGATGTTCTGTGGAATTGTTCACATGCAACAG-AAAAAACCCATAAGTG-----AGTGCCAAGCCAACTCCCGGG-TGTCAGGGACTGCTT-----TTTCTCACACCT----TGTCAT-AAAAGGATAAATGAAA-TGATC-ATAACAAAATAATATGCATCTTCATATGTAAATGATCCAGCACAACTTTACTAGAATACATAATAGA-TTGTATGGTTGCC-----------TGAGTCAATTTGGGTTT-AGAAGTAAGAATATTGGAAGCATTTCCTTAC-AAAAATACTAAAGAATGAAAGACAAGAGGTTCCAGTCAACATCAGAATGAAAATTAG i papAnu2.chr2 I 183 C 0 s chlSab2.chr15 4922119 847 + 91754291 cccatttacta--tcttgaaatgg-aatccatagataatataatctatctacatacataattcc--aa--------------------------aaacatca-tt---ataTCtatcaacgcctccc-agcc-----tcct-tgggagcgcacttgcagttgaaca-agttcagtttattgtacattgtagggtgg------------------gacaatgcaggccac-ggggaaatataggatgtcttggtaagagggtatgagaaaggacttaccataggatttagggttta-ggg---ggcagcttttggaaagattcatgaaagcggcgctttgctttggattggatgctg-tcaagaa-gtgggagtagttctatggttgggt-attttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctatcaatgtgaaaaagcagcagtcactcatattagccaggatagggggaggtttggtcatctctgtggtttggagaatgttcatgttttgtctatgttcagacgtgatta-gggaatgttcttgtttttatctagagccattcccatctgggtggccttatccaataccggtgttctgtggaattgtttacatgcaacag-aaaaaacccataagtg-----agtgccaagccaactcctggg-tgtcagggactgctt-----ttTCTCACACCT----tgtcat-aaaaggagaaatgaaa-tgatc-ataacaaaataatatgcatcttcgtatgtaaatgatccagcacaactttactagaatacataataga-gtgtatggttgca-----------TGAGTCAGTTTGGATTT-AGAAGTAAGAATATTGGAAGCATTTCGTTAG-AAAAATACTGAAGAATGAAAGACAAGAGGTTCCAGTCAGCATCAGAATGAAAATTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92402171 851 - 98464013 cccatttatta--tgttgaaatga-aatttatagataatacaatctatctacatacataactgc--aa--------------------------aaacacca-TT---GCATCtatcaacgcctccc-agccaaagaccct-caggaacacacttgctgctgacct-agttcagtttatggcacattgcaagaagg------------------gagaatgcacagcac-cgggaaatgca-gacgcctt-ttaagagcgtattagaaaggacttactataggaattagggtttgcggg---ggcagcttttggaaagattcgtggaagtggtgctttgctttggattggatgctg-tcaagaa-gtaggagtagttctagggttcggtggttttaattaacttcatctagaa-ggagggaagactagagccaggctaaagctgtcaatgtaaaaatgcagcagtcactcctattagccaggatagagggaggttcggtca---ctgtggtttggagaatgttcatgttttgtctatgttcagacgtgagta-gggaaggttcttgtttttatctggagccatccccatcagggtggcctcatccgatactggcattctgtggaattgtttgcatgcaacag-aaaagtcctagaagtg-----agtgccaagccagctcccggg-tgtcagggacggctt-----ttGCTCACAccctaactgtcgt-aaaaggagaaaggaaa-tgatc-ataataaaataagatgcaggttcacatggaaatgatccagcacaactttgctagaacacataacaga-tcatatggttgca-----------TGAGTCAGTTGGGACTT-AGAAGTAAGAATATTGGAAGCATTTCCTCAC-AAAAATACAGAAGAATGAAAGGCAAGAGATTCCAGTTAACATC--AATTAAAATTAG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24779510 862 - 42124431 cccctttacta--tcttgaaatga-aatccatagataatataatctacttacagatataattGC--AATTATACTTATATATAAGTATGTAGATGTATATCA-CTAAAATATCtgttggtgtctccc-aaccaaagaccct-caggaacacagttgtagttgaacg-------------------ttgcaaggagg------------------gagaatttgcacctc-------------------ttttcacgtgg----tagaaaggattt---gtaggatttagg--ttg-gtgttaggtgacttcatggaggactcacagatgcagtgctttgctttggcttggatgctg-tcaagaa-gcaggacctgttctataattgggc-attttaatacatgttacccagaa-ggagggcagactagagcaaagctaaagctatcgtcat-aaagagaagccgtcacttgttttagccaagaccaggagatgtttagtcacttctgtggtttggaccatgttcatattttgtctgtgttcagacaccatta-cagaacgctcttgtttttatctagatccatgaaggtcagagtggccttgtcaaacactggtgtcctgtgaaattgcttatgtgcaacag-gagaatacaatgagtattcttagtgccatgctgactcccagg-gatcagggactgcttttctctttctcatatcctaactgaaataaaaaggagatataaaagcaatcaataataaaataatatacacttccatatagaaacactgtagcacaactatactag-atacataatagattcagatagttgtacttTCTTCATTTGAGTCAGTTTGGAGTT-A-AAGTAAGAATATTAGAAGTGTTTCCTTACTGTAAATACAGAAGAATGAGAG----GAGTCCAGAATTAAAATCAGAATTAAAGTTAG i canFam3.chr34 C 0 I 236 a score=10589.000000 s hg38.chr3_KI270781v1_alt 43998 5 + 113034 TGTTC- s panTro4.chr3 13793277 5 - 202329955 TGTTC- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13775583 6 - 202140232 TGTTTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14327345 5 - 123690457 TGTTT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103620836 5 + 192599291 TGTTT- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103264343 5 - 192460366 TGTTT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101056554 5 + 187378091 TGTTT- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4922966 5 + 91754291 TGTTT- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92403022 5 - 98464013 CGTTT- i calJac3.chr15 C 0 C 0 e canFam3.chr34 24780372 236 - 42124431 I a score=977623.000000 s hg38.chr3_KI270781v1_alt 44003 309 + 113034 AGATACA--TAAAAACATACCAGGCTCATT--AGTCT---ATAAACCAAAGAGGG-AATAA-CCTTAATAG-AAACAGGAATAACATGCCAAGCAAATAACAGTCTGTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAACAC-TGGCCTCATTTATAAGAGTAATGTTG-AAAACGTCCCTCT---ATGATGTGGAACAGG-TAACGATTAAATACC-TCAGCAATCTTATCTCCCTTTTTGAAATTCCAATACTCATTCAAGATATGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATATTCAGTAACCTACAA s panTro4.chr3 13793282 311 - 202329955 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---ATAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACATGCCAAGCAAACAACAGTCTGTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAGCAC-TGGCCTCATTTATAAGAGTAATGTTG-AAAACGTCCCTCT-GTATGATGTGGAACAGG-TAACGATTAAATACC-TCAGCAATCTTATCTCCCTTTTTGAAATTCCAATACTCATTCAAGATATGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATATTCAGTAACCTACAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13775589 328 - 202140232 GGATACCATTAAAAACATACCAGGCTCATTTAGTTCT---ATGAGCCAAAGAAGGAAATAACCCTTAATAGAAAACAGGAATAACATGCCAAGCAAATTACAGTCTGTCAAAGAGGAAAAA-GTAAGAAGGGAATAATTTATTCCTCAGAAATAGCACTTGGCCTCATTTATAAAAGTAATGTTGAAAAACGTCCCTCNTGTATAATGTGGAACAGG-TAATGATTAAATACCTTCAGCAATCTTATCTCCCTTTTTGAAATTCCAATACTCATTCAAGATATGCATCCTGCTACTTGAAAAGACCTGGAAGGCCATATGCAGTAACCTACAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14327350 311 - 123690457 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---ATAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACATGCCAAGCAAATTACAGTCTGTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAGCCT-TGGCCTCATTTATAAGAGTAATGTTG-AAAACGTCCCTCT-GTATGATGTGGAACAGG-TAACAATTAAATATC-TCAGCAATCTTATCTCCCTTTTTGAAATTCCAATACTCATTCAAGATATGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATATTCAGTAACCTACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103620841 307 + 192599291 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---GTAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACACGCCAAGCAAATTACA----GTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAGCAT-TGGTCTCATTTTTAAGAGTAATGTTG-AAAATGTCCCTCT-GTATGATGTGGAACAGG-TAATGATTAAATACC-TCAGCAATCTTATCTCCCTTCTTGAAATTCCAATACTCATTCAAGATACGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATACTGTATAACCTACAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103264348 307 - 192460366 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---GTAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACACACCAAGCAAATTACA----GTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAGCAT-TGGTCTCATTTTTAAGAGTAATGTTG-AAAATGTCCCTCT-GTATGATGTGGAACAGG-TAATGATTAAATACC-TCAGCAATCTTATCTCCCTTCTTGAAATTCCAATACTCATTCAAGATACGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATACTGTATAACCTACAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101056559 307 + 187378091 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---GTAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACACACCAAGCAAATTACA----GTCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTCTCAG-AATAGCAT-TGGTCTCATTTTTAAGAGTAATGTTG-AAAATGTCCCTCT-GTATGATGTGGAACAGG-TAATGATTAAATACC-TCAGCAATCTTATCTCCCTTCTTGAAATTCCAATACTCATTCAAGATATGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATACTGTGTAACCTACaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4922971 311 + 91754291 GGATACA--TAAAAACATACCAGGCTCATT--AGTCT---ATAAACCAAAGAAGG-AATAA-CCTTAATAG-AAACAGGAATAACACGCCAAGCAAATTACAGTCTGTCAAAGAGG-AAAA-GTAAGGA-AGAATAAT---ATTCTCAG-AATAGCAT-TGGTCTCATTTTTAAGAGTAATGTTG-AAAATGTCCCTCT-GAATGATATGGAACAGG-TAATGATTAAATACC-TCAGCAATCTCATCTCCCTTTTTGAAATTCCAGTACTCTTTCAAGATATGCATCCTGCTACTTCAAAAGACCTGGAAGGCCATACTATGTAACCCACAA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92403027 311 - 98464013 GGATACA--TAAACTCATACCAGGCTCATC--AGCCT---ATAAACCAAAGAAGG-AATGA-CCTTAACAG-AAACAGGAATAACACACCAAGCAAATTACAGTTCATCAAAGAGG-AAAA-GTAAGAA-AGAATAAT---ATTTTCAG-AATAGCGT-TGGCCTCATTTATAAGAGTGATGTTG-AAAACGTCCCTCT-GTCTGATGTGGAACAGG-TAACGATGAAATACC-TCAGCAATCATATCTCCCTTTTTGAAGTTCCAATACTCATTCAAGATATTCATTCTGCTACTTTAAAAGGCCTGGAAGACCATATTCAGTAACCTACCA i calJac3.chr15 C 0 I 184 s canFam3.chr34 24780608 306 - 42124431 AGATAAA--TAATAGCATGCCACATTCATG--CGTATGTGATAATAGAAAGAAGG-ATTAA-ACTCGATGG-AAATAGGAATAACAT---AAGTAAATTACAGGCTGACAAAAATG-AAAATAGAAGGA-AGAACAAT---ATTCTCAT-AGTAATAT-TGACTTTATATG-AACAGCAATGAAA-AAAAT-TCTTTCT------ATGTGGAACAAGCTAGTGATGGACTATC-TCAGAGATCATCTCTCCAGTCATGAAATTTCAATATTCATTCCAGGCATGCCTCCTACTACTTAAAAAGACCTTGATGAGCATGTACAATAAACCCTAA i canFam3.chr34 I 236 C 0 a score=1246720.000000 s hg38.chr3_KI270781v1_alt 44312 383 + 113034 GATAATGCATATTTTCATGTGATGAGGTGCACTCCGGGTTCTTGCCTTGCCTCAGTTCTCAAACGTGAGTCTCAAACTGAAGCAAACTAAAGGGATAATAACACTTACCCTACAGGGTG---------------------------------------------GGTGCTTCGATTAGAGGTAATGTTTGGGATATGCACAGCTTATGGGGCTCTGAAAGCTGGCCATTGCCATCAATTTGGTCT------GCACGCACACAG-------------AAAGAGAGGGTGAGTGCCTGCGTCGGTCTGCCTGGTTGCATTGAAGGTACTGGATTGAATGTGTGTGA-TCATGTTGGCAGGAGAATCGCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTAGGGGGA-AACAGGGG---ACACAGGGGACATGTTCTGAAGTAACTG s panTro4.chr3 13793593 383 - 202329955 GATAATGCATATTTTCATGTGATGAGGTGCACTCCGGGTTCTTGCCTTGCCTCCGTTCTCAAACGTGAGTCTCAAACTGAAGCAAACTAAAgggataataacacttaccctacagggtg---------------------------------------------ggtgcttagattagagataatgtttgGGATATGCACAGCTTATGGGGCTCTGAAAGCTGGCCATTGCCATCAATTTGGTCT------GCATGCACACAG-------------AAAGAGAGGGTGAGTGCCTGCGTCGGTCTGCCTGGTTGCATTGAAGGTACTGGATTGAATGTGTGCGA-TCATGTTGGCAGGAGAATCGCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTAGGGGGA-AATAGGGG---ACACAGAGGACATGTTTTGAAGTAACTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13775917 387 - 202140232 GATAATGAATATTTTCATGTGATGAGGTGCACTCTGGGTTCTTGCCTTGCCTCAGTTCTCAAACCTGAGTCTCAAACTGAAGCAGACTAAAgggataataacacttaccctacagggcg---------------------------------------------ggtgctaagattagagataatgtttgggatatgcatagcTTATGGGGCTCTGAAAGCTGGCCATTGTTATCAATTTGGTCT------GCATGCACACAG-------------AGAGGAAGGGTGAGGGCCTGCGTGGGTCTGCCTGATTGCATTGAAGGTACTGAATTGAATGTGTGTGAGTCATGTTTGCAAGAGAATCACAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTAGGGGGA-AATTAGGGGACACACAAGGACCAGGTTTTGAAGTGACTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14327661 383 - 123690457 GATAATGAATATTTTCATGTGATGAGGTGCACTCCGGGTTCTTGCCTTGCCTCAGTTCTCAAACCTGAGTCTCAAACTGAAGCAGACTAAAgggataataacacttaccctacagggcg---------------------------------------------ggtgctaagattagagataatgtttgggatatgcatagcTTATGGGGCTCTGAAAGCTGGCCGTTGTCATCAATTTGGTCT------GCATGCACACAG-------------AGAGAGAGGGTGAGTGCCTGCGTGGGTCTGCCTGATTGCATTGAAGGTACTGGATTGAATGTGTGTGA-TCATGTTTGCAGGAGAATCGCAGGCACAGCTATTACAGGTAATAGTGCAGGCTCAGTACCAGGGGGA-AATAGGGG---ACACAGAGGACAGGTTTTGAAGTAACTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103621148 426 + 192599291 GATAATTAATATTTTAATGTGATGAGGTGCACTCTGGGTTCTTGCCTTGCCTAAATTCTCAAACCTGAGTCTCAAACTGGAGCAGACTAAAgggataataacacttaccctacagggcgggtgctaagattagaGAgggataataacacttaccctacagggcaggtgctaagattagagataatgtttgggatatgcatagcTTATGGGGCTCTGAAAGCTGGCCATTGTCATCAATTTGGTCT------GCATGCACACAG---------------AGAGAGGGTGAGTGCCTGCGTGTATCTGCCTGATTGCACTGAAGGTACTGGATTGAATGTGTGTGA-TCATGTTTGCAGGAGAATCCCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTGGGGGGA-AATAGGGG---ACACAGAGGACAGGTTTTGAAGTAACTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103264655 381 - 192460366 GATAATTAATATTTTAATGTGATGAGGTGCACTCTGGGTTCTTGCCTTGCCTAAATTCTCAAACCTGAGTCTCAAACTGGAGCAGACTAAAgggataataacacttaccctacagggcg---------------------------------------------ggtgctaagattagagataatgtttgggatatgcatagcTTATGTGGCTCTGAAAGCTGGCCATTGTCATCAATTTGGTCT------GCATGCACACAG---------------AGAGAGGGTGAGTGCCTGCGTGTGTCTGCCTGATTGCACTGAAGGTACTGGATTGAATGTGTGTGA-TCATGTTTGCAGGAGAATCCCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTGGGGGGA-AATAGGGG---ACACAGAGGACAGGTTTTGAAGTAACTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101056866 381 + 187378091 gataattaatattttaatgtgatgAGGTGCACTCTGGGTTCTTGCCTTGCCTCAGTTCTCAAACCTGAGTCTCAAACTGGAGCAGACTAAAGGGATAATAACACTTACCCTACAGGGCG---------------------------------------------GGTGCTAAGATTAGAGGTAATGTTTGGGATATGCATAGCTTATGGGGCTCTGAAAGCTGGCCATTGTCATCAATTTGGTCT------GCATGCACACAG---------------AGAGAGGGTGAGTGCCTGCGCGTGTCTGCCTGATTGCACTGAAGATACTGGATTGAATGTGTGTGA-TCATGTTTGCAGGAGAATCCCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTGGGGGGA-AATAGGGG---ACACAGAGGACAGGTTTTGAAGTAACtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4923282 381 + 91754291 GACAATTAATATTTTAATGTGATAAGGTGCACTCTGGGTTCTTGCCTTGCCTCAGTTCTCAAACCTGAGTCTCAAACTGGAGCAGACTAAAgggataataacacttaccctacagggca---------------------------------------------ggtgctaagattagagataatgtttgggatatgcatagcTTATGGGACTCTGAAAGCTGGCCATTGTCATCAATTTGGTCT------GCATGCACACAC---------------AGAGAGGGTGAGTGCCTGCGTGTGTCTGCCAGATTGCACTGATGGTACTGGATTGAATGTGTGTGA-TCATGTTTGCAGGAAAATCCCAGGCACAGCTATTGCAGGTAATAGTGCAGGCTCAGTACTTGGGGGA-AATAGGGG---ACACAGAGGACAGGTTTTGAAGTAACTG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92403522 373 - 98464013 GATAATGAATATTTTAATGTGATGTGGTGCATCCCAGGTCCCTGCCTTGCATCAGTTCTCAAACCTGA-----------AAGCAGACTAAAgggatgatagcacttgccctacagcgtg---------------------------------------------ggtgttaagattagagatcatgtttggaatgtgcatagcgtaTGAGGCTCTGAAAGCTAGCCATTGTCATCAGTTTGGTCT------GCGTGCACAGGG-------------AAAGAGAGGGTGAGTGCCTGCGTGAGTCTGCCAGATGGCATTGAGGGTACTGGATTGAATGCGTGTGA-TCATGTGTGCAGGAGAATCCAAGCCACAGCTGTTGCAGGTAATAGTGCAGGCTCAGTACTGGGGGGATAATAGGGG---ACACAGAGGACAAGCTTTGAAGTAACTG i calJac3.chr15 I 184 C 0 s canFam3.chr34 24780914 394 - 42124431 GATAATGCATATTTTAATCTAATGGGATTTGCTCCAGGCCCCTGACCAGCACTGGTTCCCAAACCTCAGACTGAG---GAGGTAGACTAAAAAGACAATGACACTTACCCTGCAGGCTG---------------------------------------------GGTGCTATGATTAGAGATAATGTTTGAGATGTGCATGGTTCACAGTGTTCTAAGAGTTAG-CATTGTCATCATTCCAGTCTGTGCCCGCACGCACACGTACACACACTAAAAAAACAGAGGACGTGTCCTTGCTTGGGTCTCTGGGACTGCAGGGAATGTGCTTGATTGAATGTGCATGG-TCATGTTTGCAGGAGAGTCCTAGGCAAGGCTGTTGTGGG--GCAGTGTGGGC-CAGTACTGGGGGGT-CGTGGGGG---CTGGAAAGGACAAGTTGC-ACATGACTG i canFam3.chr34 C 0 C 0 a score=572801.000000 s hg38.chr3_KI270781v1_alt 44695 243 + 113034 -AATTGAgg-ccaggcacagtggttcatggctgtaat-cccagcactttg-ggaagttg-----agatgggaagatcacctgaggccaggagttcgagaccagcctgggaaacacagtgagacccc----atctctacaaaaaTTTGTTTTCTCTTTTTTTT-ATTTTGGTCTTATATTTAGTTTTAAAATTTTTTCTTTTTTCCCTGAGTCTGACACA-AAAaaaaa---ttttaaaaagtagccaggcatggtggcaca s panTro4.chr3 13793976 245 - 202329955 -AATTGAgg-ccaggcacagtggttcatggctgtaat-cccagcactttg-ggaagttg-----agatgggaagatcacttgaggccaggagttcgagaccagcctgggaaacacagtgagaccccccccatctccacaaaaaTTTGTTTTCTCTTTTTTT--ATTTTGGTTTTGTATTTAGTTTTAAATTTTTTTCTTTTTTCCCTGAGTCTGACACA-AAaaaaaa---ttt-aaaaagtagccaggcatggtggcaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13776304 238 - 202140232 AAATTGAGgaccaggcacagtggctcatgtctgtaatccccagcagtttgtggaagttgaatgtagatgggaagatcacttgaggccgggagtttgagaccagcctgggaaacacagtgagacccc----atctctacaaaaatttgttttctcttttttttaattttggtcttatatttagtttttaaattttttcttttttccctgagtctgataca-aaaaaaaa------------------aggcatggtggcaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14328044 242 - 123690457 -AATTGAAg-ccaggcacagtggctcatggctgtaat-cccagcactttg-ggaagttg-----agatgggaagatcacttgaggccaagagttcgagaccagcctgggaaacacagtgagacccc----atctctacaaaaatttgttttctctttttt---attttggtcttatatttagttttaaaactttttcttttttcCCTGAGTCTGATACA-AAAAAaaaaaattt--aaaagtagccaggcgtggtggcaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103621574 240 + 192599291 -AATTGAgg-ccaggcacagtggctcatggctgtaat-cccagcactttg-agaagttg-----agatgggaagatcacttgaggccaggagttcgagaccaggctgggaaacac--tgagacctc----atctctacaaaaatttgttttctcttttttt--attttggtcttctatttagttttaattttttttattttttccctgagtctgatacc-aaaacaaa---tttttttaagtagacaggcatggtggcaca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103265036 240 - 192460366 -AATTGAgg-ccaggcacagtggctcatggctgtaat-cccagcactttg-agaagttg-----agatgggaagatcacttgaggccaggagttcgagaccaggctgggaaacac--tgagacctc----atctctacaaaaaTTTGTTTTCTCTTTTTTT--ATTTTGGTCTTCTATTTAGTTTTAATTTTTTTAATTTTTTCCCTGAGTCTGATACC-AAAAAAAA---TTTTTTTAAGTAGAcaggcatggtggcaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101057247 242 + 187378091 -aattgagg-ccaggcacagtggctcatggctgtaat-cccagcactttg-agaagttg-----agatgggaagatcacttgaggccaggagttcgagaccaggctgggaaacacagtgagacctc----atctctacaaaaatttgttttctcttttttt--attttggtcttctatttagttttaaatttttttattttttccctgagtctgatacc-aaaaaaaa---tttttttaagtagacaggcatggtggcaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4923663 243 + 91754291 -AATTGAgg-ccaggcacagtggctcgtggctgtaat-cccagcactttg-ggaagttg-----agatgggaagatcacttgaggccaggagttcgagaccaggctcggaaacacggtgagaccac----atctctacaaaaaTTTGTTTTCTCTTTTTTT--ATTTTGGTCTTCTATTTAGTTTTAAAATTTTTAATTTTTTCCCTGAGTCTGATACCAAAAAAAAA---TTTTTTTAAGTAGAcaggcatggtggcaca i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92403895 160 - 98464013 -AATTGATG--caggcacagtggctcctggctgtaat-cccaacactttg-ggaaactg-----agatgagaaggttacttgaggccaggagttcaagaccagcctgggcaacatggtgaaaccct----acctctagaaaaa--------------------a--------------------------------------------------------atacaaaa---ctt--------agctgggcacagtggtgca i calJac3.chr15 C 0 C 0 e canFam3.chr34 24781308 0 - 42124431 C a score=790504.000000 s hg38.chr3_KI270781v1_alt 44938 354 + 113034 cacctatagttccagctactcaggaggctgaggtgggatgatgcttgagcccagaagttcaaggctgctgtgagctatggtggtgtcactgcactccagcctgggtaacagagaaagactctacctcTAGTAATAGTGATAATAATAATATGaaaagcccaaata-gccaaagcaacgttaagc-aaaaagaacaaagccagaggca-tcatattacctgacttcaaactaactataaggctacggtaaccaaaacatcatggtactggtacaaaaacagacatatagaccaatggaacagaatagagaa-tccagaaataaa-gccaca-cacctataa-ccatca-gatcttc--aacaaag s panTro4.chr3 13794221 354 - 202329955 cacctatagttccagctactcaggaggctgaggtgggaagatgcttgagcccagaagttcaaggctgccgtgagctatggtggtgtcactgcactccagcctgggcaacagagaaagactctacctcTAGTAATAGTGATAATAATAATATGaaaagcccaaata-gccaaagcaatcctaagc-aaaaagaacaaagccagaggca-tcatattacctgacttcaaactaactgtaaggctacggtaaccaaaacatcatggtactggtacaaaaacagacatatagaccaatggaacagaatagagaa-tccagaaataaa-gccaca-cacctataa-ccatca-gatcttc--aacaaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13776542 364 - 202140232 cacctatagttccagctactcaggaggctgagatgggaagatgcttgagcccagaagttcaaggctgctgtgagctatggtagtgccactgcactccagcctaggtaacagagaaagactctacctataataataataagaagaagaaGaagaaaagcccaaataggccaaagcaatcctaagcaaaaaagaacaaagccagaggtattcatattacatgacttcaaactaactataaggctacagtaaccaaatcatcatggtgctggtacaaaaacagacacatagaccaatggaacagaatagagaattccagaaataaangccacaccacctataanccatcaggatctttcaancaaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14328286 341 - 123690457 cacctatagttccggctactcaggaggctgaggtgggaagatgtttgagcccagaagttcaaggctgctgtgagctatggtggtgccactgcactccagcctgggtaac----aaagactctatctcTAATAAT---------AATTATATGaaaagcccaaata-gccaaagcaatcctaagc-aaaaagcacaaagccagaggca-tcatattacctgacttcaaactaactataaggctacagtaaccaaaacatcatggtactggtacaaaaacagacacatagaccaatggaacagaatagagaa-tccagaaataaa-gccaca-cacctataa-ccgtca-gatcttc--aacaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103621814 349 + 192599291 cacctatagttctggctactcaggaggctgagatgggaagatgcttgagcccagaagttcaaggcggctgtgagctatgatgatgccactgcgctccagcctgggtaacagagaaagactctacctctaataataatgata-----aaaaagaaaagcccaaaga-gccaaagcaatcctaagc-aaaaagaacaaagccagaggca-tcatattacctgactttaaactaactataaggctacagtaaccaaaacatcatggtactgatacaaaaacagacacatagaccaatggaacaaaatagagaa-tccagaaataaa-gccaca-cacctataa-tcatca-gatcttt--cacaatg i rheMac3.chr2 C 0 I 31 s macFas5.chr2 103265276 349 - 192460366 cacttatagttctggctactcaggaggctgagatgggaagatgcttgagcccagaagttcaaggcggctgtgagctatgatgatgccactgcgctccagcctgggtaacagagaaagactctacctctaataataatgata-----aaaaagaaaagcccaaaga-gccaaagcaatcctaagc-aaaaagaacaaagccagaggca-tcatattacctgactttaaactaactataaggctacagtaaccaaaacatcatggtactgatacaaaaacagacacatagaccaatggaacaaaatagagaa-tccagaaataaa-gccaca-cacctataa-tcatca-gatcttt--gacaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101057489 349 + 187378091 cacctattgttctggctactcaggaggctgagatgggaagatgcttgagcccagaagttcaaggcggctgtgagctatgatgatgccactgcgctccagcctgggtaacagagaaagactctacctctaataataatgata-----aaaaagaaaagcccaaaga-gccaaagcaatcctaagc-aaaaagaacaaagccagaggca-tcatattacctgactttaaactaactataaggctacagtaaccaaaacatcatggtactgatacaaaaacagacacatagaccagtggaacagaatagagaa-tccgaaaataaa-gccaca-cacctataa-TCATCA-GATCTTc--gacaaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4923906 348 + 91754291 cacctatagttccggctactcaggaggctgagatgggaagatgcttgagcccagaagttcaaggcggctgtgagctatgatgatgccactgagctccagcctgggtaacagagaaagactctacctctaataataatgat------aagaagaaaagcccaaaga-accaaagcaatcctaagc-aaaaagaacaaagccagatgca-tcatgtcacctgactttaaactaactataaggctacagtaaccaaaacatcatggtactgatacaaaaacagacacacagaccaatggaatagaatagagaa-tccagaaataaa-gccaca-cacctataa-tcatca-gatcttc--aacaaag i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404055 0 - 98464013 C a score=51165.000000 s hg38.chr3_KI270781v1_alt 45292 28 + 113034 ttaacaaaaataagcaatg-gggaaagga s panTro4.chr3 13794575 28 - 202329955 ttaacaaagataagcaatg-gggaaagga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13776906 29 - 202140232 ttaacaaaaataagcaatgtgggaaagga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14328627 28 - 123690457 ttaacaaaaataagcaatg-gggaaagga i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103265625 28 - 192460366 ttaacaaaaataagcaatg-gggaaagga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101057838 28 + 187378091 ttaacaaaaataagcaatg-gggaaagga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4924254 28 + 91754291 ttaacaaaaacaagcaatg-gggaaagga i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103622163 31 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404055 0 - 98464013 C a score=1052672.000000 s hg38.chr3_KI270781v1_alt 45320 484 + 113034 cttcct--attgaataaatggtgct-tggatggcc-ggttagcc--atatgc--aaaagaatg-aaattgga--cccctacttttc-----actacatacaaaaattaactcaagctggatta-aagatttaaatgtaatacctcaaaat-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcaacaaaaacaaaaattgacaagtgacacctaattaaactagagcttctaatttagctaaagagtaaacctaattaaactaaagagtaaacagacaacctacagaatgggagaaaatgtttccaagctatgcacccag-caaaggtctaatatacagaat------ctggccgggccaggtggctcacacc-tgt-aatcctagcgctttgggaggtctggtaggcagat-cgcttgagctcaggagttcaagaccagcct-gggcaacatggc s panTro4.chr3 13794603 484 - 202329955 cttcct--attgaataaatggtgct-tggatggcc-ggtcagcc--atatgc--aaaagaatg-aagttgga--cccctgcttttc-----actacacacaaaaattaactcaagctggatta-aagatttaaatgtaatacctcaaagt-------------------------------------------aggagaatcctagaagaaaacctaggaaacaccattttggacactggccttggggaagaatttatgactaagtcctcaaaagcagttgcaacaaaaacaaaaattgacaagtgacacctaattaaactagagcttctaatttaactaaagagtaaacctaattaaactaaagagtaaacagacaacctacagaatgggagaaaatgtttccaagctatgcatccag-caaaggtctaatatacagaat------ctggccgggccaggtggctcacacc-tgt-aatcctagcgctttgggaggtctggtaggcagat-cgcttgagctcaggagttcaagaccagcct-gggcaacatggc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13776935 511 - 202140232 cttccctatttgaataaatggtgctggggatggccgggttagcccaatatgccaaaagaaatgaaaattgggaccccctacttttccacgtattatacg-aaaaattaactcaaggtggattagaagatttaaatgtaacacctcaaagt-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacgttggccttggggaagaatttatgactaagtcctcaaaagcagttgcaacaaaaacaaaaagtgacccgtgagacctaattaaactagagcttctaattaaactaaagagtaaacctaattaaactaaagagtaaacagacaacctacagaatgggagaaaatacttgcaagctatgcatccagtcaaaggtctaatatacagaatctggtcctggccaggccaggtggctcacaccatgtaaatcctagcactttgggaggtctggtgggcagatccgcttgagctcaggagttcaagaccagcctggggcaacatggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14328655 462 - 123690457 cttcct--attgaataaatggtgct-gggatggcc-ggttagcc--atatgc--aaaagaatg-aaattgga--cccctacttttc-----actatatacaaaaactaactcaaagtggatta-aagatttaaatgtaacacctcaaagt-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcaacaaaaacaaaaattgacaagtgaggcctaattaaactagagctt----------------------ctaattaaactaaagagtaaacagacaacctacagaatgggagaaaatatttgtaagctatgcatccag-caaaggtctaatatacagaat------ctggccaggccaggtggctcacacc-tgt-aatcctagcactttgggaggtctggtgggcagat-cacttgagctcaggagttcaagaccagcct-gggcaacatggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103622194 496 + 192599291 tttcct--attgaataaatggtgct-gggatggcc-agttagcc--acatgc--aaaagaatg-aaattgga--cccctacttttc-----actatatacaaaaattaactcaaggtggatta-aagatttaaatgtaagaccttaaactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------nncgttttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcagcaaaaacaaaaattgacaagtgagacctaattaaactagagtttctaattaaactaaagagtaaacctaattaaactaaagagtaaat-gacaacctacagaatgggagaaaatatttgcaagctatgcatccaa-taaaggtctcatatacagaat------ctggcggggccaggtagctcacacc-tgt-aatcctagctcttcgggaggtctggtgggcagat-cgcttgagctaaggagttcaagaccagcct-gggcaacatggc i rheMac3.chr2 I 31 I 1164 s macFas5.chr2 103265653 482 - 192460366 tttcct--attgaataaatggtgct-gggatggcc-agtta-cc--acatgc--aaaagaatg-aaattgga--cccctacttttc-----actatatacaaaaattaactcaaggtggatta-aagatttaaatgtaagacctcaaact-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcagcaaaaacaaaaattgacaagtgagacctaattaaactagagtttctaattaaactaaagagtaaacctaattaaactaaagagtaaat-gacaacctacagaataggagaaaatatttgcaagctatgcatccaa-taaagggctcatatacagaat------ctggctgggccaggtggctcacacc-tgt-aatcctagctcttcgggaggtctggtgggcagat-cgcttgagttaaggagttcaagaccagcct-gggcaacatggc i macFas5.chr2 C 0 I 1 s papAnu2.chr2 101057866 483 + 187378091 tttcct--attgaataaatggtgct-gggatggCC-Agttagcc--acatgc--aaaagaatg-aaattgga--cccctacttttc-----actatatacaaaaattaactcaaggtggatta-aagatttaaatgtaagacctcaaact-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcagccaaaacaaaaattgacaagtgacacctaattaaactagagtttttaattaaactaaagagtaaacctaattaaactaaagagtaaat-gacaacctacagaatgggagaaaacatttgcaagctatgcatccaA-TAAAGGTCTCATATACAGAAT------CTGGCCGGgtcaggtggctcacacc-tgt-aatcctagctcttcgGGAGGTctggtgggcagat-cgcttgagctaaggagttcgagaccagcct-gggcaacatggc i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 4924282 483 + 91754291 cttcct--attgaataaatggtgct-gggatgtcc-agttagcc--acatgc--aaaagaatg-aaattgga--cccctacttttc-----actatatacaaaaattaactcaaggtggatta-aagatttaaatgtaagacctcaaact-------------------------------------------ataagaatcctagaagaaaacctaggaaacaccattttggacattggccttggggaagaatttatgactaagtcctcaaaagcagttgcagcaaaaacaaaaattgacaagtgagacctaattaaactagagtttctaattcaactaaagagtaaacttaattaaactaaagagtaaat-gacaacctacagaatgggagaaaatatttgcaagctatgcatccaa-taaaggtctcatatacagaat------ctggccgggccaggtggctcacacc-tgt-aatcctagctctttgggaggtctggtgggcagat-cacttgagctaaggagttcaagaccagcct-gggcaacatggc i chlSab2.chr15 C 0 I 1 e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404055 0 - 98464013 C a score=357025.000000 s hg38.chr3_KI270781v1_alt 45804 203 + 113034 aaaaccccacctct-agaaaaattacaaaac-ttagctggg-cgcagtggtgc-gtg-cctgtagtaccagc-ctcttgggaggctaaggcaggagaattgctcgagctcaggaggcagatgttgcagtgagctgagatcgtgccactgcactccaatctgggcaacaggaatgaaat-cctgaagaaaaaaagaaag----aagaaagaaaG--A s panTro4.chr3 13795087 203 - 202329955 aaaaccccgcctct-agaaaaattacaaaac-ttagctggg-cgcagtggtgc-gtg-cctgtagtaccagc-cacttgggaggctaaggcaggagaattgctcgagcccaggaggcaaaggttgcagtgagctgagatcgtgccactgcactccaatctgggcaacaggaatgaaat-cctgaagaaaaaaagaaag----aagaaagaaaG--A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777446 212 - 202140232 aaaaccccgcctctaagaaaaagtacaaaactttagctgggccgcagtggtgcaatgccctgtagtcccagcttacttgggaggctaaggcaggagaattgctcaagcccaggaggcagaggttgcagtgagctaagatcgtgccactgcactccaatctgggcaacaggagtgaaatgcctgaagaaaaaaagaaag----aagaaagaaaGNNA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329117 203 - 123690457 aaaaccccgcctct-agaaaaattacaaaac-ttagctggg-cgcagtggtac-atg-cctgtagtctcagc-tacttgggaggctaaggcaggagaattgctcgagcccaggaggcagaggttgcagtgagctaagatcgtgccactgcactccaatctgggcaacaggagtgaaac-cctgaagaaaaaaagaaag----aagaaagaaaG--A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266136 203 - 192460366 aaacccccgcctct-agaaaaattacaaaac-ttagctggg-cgcagtggtgc-atg-cctgtagtcccagc-tactcgggaggctaaggcaggagaattgctcaagcccaggaggcagaggttgcagtgagctgagatcatgccactgcactccaatctgggcaacaggagtgaaac-cctgaagaaaaaaagaaag----aagaaagaaag--a i macFas5.chr2 I 1 I 22 s papAnu2.chr2 101058350 207 + 187378091 aaacccccgcctct-agaaaaattacaaaac-ttagctggg-cgcagtggtgc-atg-cctgtagtcccagc-tactcgggaggctaaggcaggagaattgctcgagcccaggaggcagaggttgcagtgagctgagatcatgccactgcactccaatctgggcaacaggagtgaaac-cctgaagaaaaaaagaaagaagaaagaaagaaag--a i papAnu2.chr2 I 1 I 22 s chlSab2.chr15 4924766 203 + 91754291 aaacccccgcctct-agaaaaattacaaaac-ttagctggg-cacagtggtgc-atg-cctgtagtcccagc-tactcgggaggctaaggcaggagaattgcttgagcccaggaggcagaggttgcagtgagctgagatcatggcactgcactccaatctgggcaacaggagtgaaac-cctgaagaaaaaaagaaag----aagaaagaaag--a i chlSab2.chr15 I 1 I 4 e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404055 0 - 98464013 C a score=174437.000000 s hg38.chr3_KI270781v1_alt 46007 143 + 113034 ggctgggtgtggtggctcacacctgtaatctcagca--ctttgggaggcctagatgggcggataat-caggtcaggagatcgagaccatcctggctaacacagtgcaacccagtctctaccaaaaata------------gccaggcgtggtggtggg s panTro4.chr3 13795290 153 - 202329955 ggctgggtgtggtggctcacacctgtaatcccagca--ctttgggaggcctagatgggcggataat-caggtcaggagatcgagaccatcctggctaacacagtgcaacccagtctctaccaaaaata--taaaaaattagccaggcgtggtggtggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777658 158 - 202140232 ggccgggtgtggtggctcacgcctgtaatcccagcactctttgggaggcctaggcgggcggataatccaggtcaggagatcgagaccatcctggctaacacagtgcaaccccatctctactaaaaattacaaaaaaattagccaggcgtggtggtggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329320 153 - 123690457 ggccgggtgcggtggctcacgcctgtaatcccagca--ctttgggaggcctaggcaggcggatcat-gaggtcaggagatcgagaccatcctggctaacacagtgcaaccccatctctactaaaaata--caaaaaattagccaggcgtggtggtggg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266361 153 - 192460366 ggccgggcgcggtggctcaagcctgtaatcccagca--ctttgggaggccgaggcgggtggatcac-gaggtcaggagatcgagactaacctggctaacatggtgaaaccccgtctctactaaaaata--caaaaaactagccgggcgtggtggtggg i macFas5.chr2 I 22 C 0 s papAnu2.chr2 101058579 153 + 187378091 ggccgggcgtggtggctcaagcctgtaatcccagca--ctttgggaggccgaggcgggtggatcac-gaggtcaggagatcgagactatcctggctaacatggtgaaaccccgtctctactaaaaata--taaaaagctagccgggcgtggtggcggg i papAnu2.chr2 I 22 C 0 e chlSab2.chr15 4924969 4 + 91754291 I e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404055 0 - 98464013 C a score=159919.000000 s hg38.chr3_KI270781v1_alt 46150 117 + 113034 cg-cctgtagtcccagctactcgggatgctgaggcaggagaa-tggcgtgaa-cccgggaggtggagcttgcagtga-gccgagatc-acgcca-ctgcact-ccagcctgagggaa-agaa-cta---------------------- s panTro4.chr3 13795443 117 - 202329955 cg-cctgtagtcccagctactcaggaggctgaggcaggagaa-tggcgtgaa-cttgggaggtggagcttgcagtga-gccgagatc-acgcca-ctgcact-ccagcctgagggaa-agaa-cta---------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777816 126 - 202140232 cgccctgtagtcccagctactcgggaggctgaggcaggagaactggcgtgaaccccggaaggcggagcttgcagtgaggccgagatctacgccagctgcactcccagcctggggcaacagaatcta---------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329473 117 - 123690457 cg-cctgtagtcccagctactcgggaggctgaggcaggagaa-tggcgtgaa-cccagcaggcggagcttgcagtga-gccgagatc-acgcca-ctgcact-ccagcctgggcgac-agaa-cta---------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266514 117 - 192460366 tg-cctgtagtcccagctacttgggaggctgaggcgggagaa-tggcgtgaa-ccctggagccggagcttgcagtga-gccgagatc-acgcca-ctgcact-ccagcctgggggac-acag-cga---------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101058732 117 + 187378091 cg-cctgtagtcccagctacttgggaggctgaggcgggagaa-tggcgtgaa-ccctggagccggagcttgcagtga-gctgagatc-acgcca-ctgcact-ccagcctgggagac-acag-cga---------------------- i papAnu2.chr2 C 0 C 0 s calJac3.chr15 92404055 139 - 98464013 tg-cctgtagtcccagctacttgggaggctaaggcaggagaa-ttgcttggg-cccaggaggcagaggttgctgtga-gctgagatc-gtgcca-ctgcact-ctaatatgggccac-agGA-GTggaaggaaggaaggaaggaagta i calJac3.chr15 C 0 I 45 e chlSab2.chr15 4924969 4 + 91754291 I e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C a score=12136.000000 s hg38.chr3_KI270781v1_alt 46267 11 + 113034 gactccgtctc s panTro4.chr3 13795560 11 - 202329955 gactccgtctc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777942 11 - 202140232 gactccgtctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329590 9 - 123690457 gact--gtctc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266631 11 - 192460366 gacttcgtctc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101058849 11 + 187378091 gactccgtctc i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4924969 4 + 91754291 I e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C e calJac3.chr15 92404194 45 - 98464013 I a score=14060.000000 s hg38.chr3_KI270781v1_alt 46278 23 + 113034 aaaaaaaaaaaa----agtaaggaact s panTro4.chr3 13795571 24 - 202329955 aaaaaaaaaaaa---cagtaaggaact i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777953 25 - 202140232 aaaaaaaaaaaa--aaagtaaggaaga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329599 27 - 123690457 aaaaaaaaaaaaaaaaagaaaggaaga i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266642 17 - 192460366 aaaaaaaaaaaa----aaaag------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101058860 14 + 187378091 aaaaaaaaaaaa----aa--------- i papAnu2.chr2 C 0 C 0 s calJac3.chr15 92404239 23 - 98464013 aaagaagaaaga----aggaaggaaga i calJac3.chr15 I 45 C 0 e chlSab2.chr15 4924969 4 + 91754291 I e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C a score=1122304.000000 s hg38.chr3_KI270781v1_alt 46301 522 + 113034 aaaaaagaaagcaggggaagggagggagggagggaatctataaggaactt-aaatggttcaacaaataaaaaataaa---ccccattaa-aaagtgggcaaaagacatgaacagacccttctcaaaagaggacatacaagcagccaacaagcatgtgaaataatgctctgcatccctgatcatcagagaaa-tgcaagtcaaaaccacaatgagataccatctcacaccagatggcaatt--attaaatgg----c--ttgttaaaaaat--caaaaaacaacagatgccagcaaagctgcagag-aaca--gggaatgcttatactct-gctggtggg-aatgt-aaattagttcag--ccactgtggaaagcagtgtggag-gtttctc---agagaacttagagttaccattcaac-ccagcaatctcattattgggtatata-ttaaaaagaaaaatc--gttctaccaaaaa-gacacaggcactcacgtgtt-catcacagcactgtcacaacagcaaagacatgg--aatcaa-cctagatgcca-atcaata s panTro4.chr3 13795595 525 - 202329955 aaaaaagaaagcaggggaagggagggagggagggaatctataaggaactt-aaatggttcaacaaataaaaaataaataaccccattaa-aaagtaggcaaaagacatgaacagacccttctcaaaagaggacatacaagcaaccaacgagcatgtgaaataatgctctgcatccctgatcatcagagaaa-tgcaagtcaaaaccacaatgagataccatctcacaccagatggcaatt--attaaatgg----c--ttgttaaaaagt--caaaaaacaacagatgccagcaaagctgcagag-aaca--gggaatgcttatactct-gctggtggg-aatgt-aaattagttcag--ccactgtggaaagcagtgtggag-gtttctc---agagaacttagagttaccattcaac-ccagcaatctcattactgggtatata-ttaaaaagaaaaatc--gttctaccaaaaa-gacacaggcactcacgtgtt-catcacagcactgtcacaacagcaaagacatgg--aatcaa-cctagatgcca-atcaata i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13777978 557 - 202140232 aaaaaagaaagcgggggaagggagggagggagggaatctataaggaacgtaaaacagttcaacaaacaaaaaacaaataaccccattaagaaagtgggcaaaagacatgaacagacccttctcaaaagaggacatacaagcagccaacaagcatgtgaaataatgctctacatccctgatcatcagagaaa-tgcaagtcaaaaccacaatgagataccatctcacaccagatggcaatttaattaaattggctat--ttattaaaaaataaaaaaaaaaaacagatgccagcaaagctgcagagaaacagcggaaacgcttatacactggctggtgggaaatgtaaaattagttcagtcccactgtggaaagcagtgtggagtgtttctcacgagagactttagagttaccattcaactccaacaatctcattactgggtatatatttaaaaagaaaaatcatatcctaccaaaaaggacatgtgcactcacatgttccctcacagcactgttacaatagcaaagacatggnaantcaaccctagatgccgnatcaata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14329626 527 - 123690457 aaaaaagaaag-gggggaaaggagggagggagggaatctataaggaactt-aaacagttcaataaacaaaaaacaaataaccccattaa-aaagtgggcaaaagacatgaacagacctttctcaaaagaggacatacaagcagccaactagcatgtgaaataatgctctacatcactgatcatcagagaaattgcaagtcaaaaccacaatgagatactatctcacaccagatggcaatt--attaaatgg----ctattattaaaaaat--caaaaagcaacagatgccagcaaagctgcagag-aaca--gggaacgcttatacact-gctggtggg-aatgt-aaattagttcag--ccactgtggaaagcagtgtggag-atttctc---agagaacttagagttaccattcaat-ctagcaatctcattactgggtatata-ttaaaaagaaaagtc--gttctaccaaaaa-gacacatgcactcacgtgtt-catcacagcactgtcacaacagcaaagacatgg--aatcaa-cctagatactg-atcaata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103266659 517 - 192460366 aaaaaagaaagtgggggaagggagggagggagggaatctataaggaactt-aaatgattcaacaaacaaaaaacaaataaccccattaa-aaagtgggcaaaagacatgaacagacacttctcagaaaaggacatataagcagccaacaagcatgtgaaataatgctctacatcactgatcatc--agaaa-tgcaagtcaaaaccacaatgagataccatctgacaccagatggcaatt--attaaatgg----ctattattaaaaaat--caaaaaacagcagatgccagcaaagctgcagag-aaca--gagaacgcttatacact-gctggtggg-aatgt-aaattagttcag--ccactgtggaaagcagtgtggag-atttctc---agagagcttagagttactgttcaac-tcagcaatctcattactaggtatgta-ttaaaaagaaaaatc--gttctaccaaaaa-g--------acccacgtgtt-catcacaggactatcacaacagcaaagatatgg--aatcaa-cctagttgccg-atcaata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101058874 525 + 187378091 aaaaaagaaagtgggggaagggagggaggtagggaatctataaggaactt-aaatgattcaacaaacaaaaaacaaataaccccattaa-aaagtgggcaaaagacatgaacagacacttgtcaaaaaaggacatataagcagccaacaagcatgtgaaataATGCTctacatcactgatcatc--agaaa-tgcaagtcaaaaccacaatgagataccatctgacaccagATGGCAATT--Attaaatgg----ctattattaaaaaat--caaaaaacagcagatgccAGCAAAGCTGCAGAG-AACA--Gagaacgcttatacact-gctggtggg-aatgt-aaattagttcag--ccactgtggaaagcagtgtggag-atttctc---agagaacttagaGTTACTGTTcaac-tcagcaatctcattactgggtatgta-ttaaaaagaaaaatc--gttctaccaaaaa-gacacatgcactcacgtGTT-CATCACAGGACtatcacaacagcaaagatatgg--aatcaa-cctagttGCCG-ATCAATa i papAnu2.chr2 C 0 I 1469 s chlSab2.chr15 4924973 525 + 91754291 caaaaagaaagtgggggaagggagggaggtagggaatctataaggaattt-aaatgattcaacaaacaaaaaacaaataaccccattaa-aaagtgggcaaaagacatgaacagacacttctcaaaaaaggacatataagcagccaacaagcatatgaaataatgctctacatcactgatcatc--agaaa-tgcaagtcaaaaccacaatgagataccatctgacaccagatggcaatt--attaaatgg----ctattattaaaaaat--caaaaaacagcagatgccagcaaagctgcagag-aaca--gagaacgcttatacact-gctggtggg-aatgt-aaattagttcag--ccactatggaaagcagtgtggag-atttctc---agagaacttagagttactgttcaac-tcagcaatctcattactgggtatgta-ttaaaaagaaaaatc--attctaccaaaaa-gacacatgcactcacgtgtt-catcacaggactatcacaacagcaaagacatgg--aatcaa-cctagttgccg-atcaata i chlSab2.chr15 I 4 C 0 s calJac3.chr15 92404262 519 - 98464013 aagaaagaaagATAGATGGGGGAGGAAGGGAGGgaatctataaggaactt-aaacagttcaacaaacaaaaaacaaa----cccattaa-aaagtgggcaaaagacatgaacagacacttctcaaaaga-tacattcaagcagccaacgagcaaatgaaataatgctctacctcactgatcatcagagaaa-tgcaaatcaaaaccacagtgagataccatctcacgccagatggcaatt--attaaatgg----ctgttattaaaaaat--caaaaaacaacagatgccagcaaagctacagag-aaca--gggaacacttatacatg-gctggtggg-aatgt-aaattagttcag--tcactgtggaaagcaattcggag-atttcta---agagaacttagaattaccatttaac-ccagcaatctcattattgggtatata-ttaaaaagaaaaatg--gttccaccaaaaa-gacatgtg--ttcacatgtt-catcacagcactgtcacaacagcaaaga-gtgg--agccaa-cctagatgctt-atcaata i calJac3.chr15 C 0 C 0 e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C a score=21369.000000 s hg38.chr3_KI270781v1_alt 46823 11 + 113034 gtggactggat s panTro4.chr3 13796120 11 - 202329955 gtggactggat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13778535 11 - 202140232 gtggactggat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14330153 11 - 123690457 gtggactggat i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103267176 11 - 192460366 gtggattggat i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4925498 11 + 91754291 gtggactggat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92404781 11 - 98464013 gtggactggat i calJac3.chr15 C 0 C 0 e papAnu2.chr2 101059399 1469 + 187378091 I e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C a score=192448.000000 s hg38.chr3_KI270781v1_alt 46834 203 + 113034 aaagaaaatACgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataaaatatataaatgaattatattataat-tataatatat----tatat-tataattata--tt--atataatattatgtattct-ataata---------cataatataattatatatg--atattatatat----tattat--atacac-ata-atattatattctatat-gtatatg s panTro4.chr3 13796131 182 - 202329955 aaagaaaatACgtgtgtgtgtgtgtgtgtgtgt--------------------ATAAAATATATAAACGaattatattataatatataatatatgtattatat-tataattata--tt--atataatat---agattat-ataata-------tacataatataattatataa-------tatatat----tattat--atacac-aca-atattatattctatat-gtatatg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13778546 175 - 202140232 aaagtaaatACGTGTGTGTGTGT------------------------------ATAAAATATATAAACGAATtataatatgat----aatatat----tatatctataattata--ta--atat--tattatatactatcatatta-------tatatagtataattatatatgatatattatatat----tattat--atACACAATA-ATATTATATTCCATAT-GTATATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14330164 188 - 123690457 aaagaaaatACgtgtgtgtgtgtgtgtgtgt----------------------ataaaatctataaatgaattatgttataatatataatatatgtattatat-tataattata--tt--atataatat---atattac-ataata---------tataatata--tatacatgatataatatacattatatattat--atacacaata-atattatattctatat-gtatatg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103267187 186 - 192460366 aaagaaaatatgTGTGTGTGTGTG--------t--------------------atataatatataaaggaattatgttataatatacaatataa----tatat-----aatataatat--ataatatat---atattat-attataattatattatacaatatattgttacataatacataatatat----tattatacatatacaata-atattatattctatatggtatatg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101060868 188 + 187378091 aaagaaaatatgtgtgtgtgtgtg----tgtat--------------------atataatatataaaggaattatgttataatatacaatataa----tatat-----aatata--tt--ataatacat---atattat-attataattatattatacaatatattgttacataatacataataaat----tattatacatatacaata-atattatattctatatggtatatg i papAnu2.chr2 I 1469 C 0 s chlSab2.chr15 4925509 192 + 91754291 aaagaaaatatgtgtgtgtgtgtgtgtgtgtgt--------------------gtgtAATATATAAAGGAATTATGTtataatatacaatataa----tatat-----aatata--tt--ataatacat---atattat-attataattatattatacaatatattgttatataatacataatatat----tattatacatatacaaca-atattatattctatatggtatatg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92404792 142 - 98464013 caagaaaatatg-----------------gcat--------------------atat-atatataaggaa------ttgtaatatataaca-------tttat-tataattata--ttccatgtaatct---taattat-gttata----------------taattatata-----------atgt----taata---atatataatatatattctattctatatgatatatg i calJac3.chr15 C 0 C 0 e rheMac3.chr2 103622690 1164 + 192599291 I e canFam3.chr34 24781308 0 - 42124431 C a score=1168629.000000 s hg38.chr3_KI270781v1_alt 47037 428 + 113034 ttatatataatataaagg-aaaatactataTC--TCTCT-------------CCC-------------------------CAggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-agcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtaccatatgttctcacttataagtgagag-ttaaa---------------------------cattgggtaatcatggagataaagatggtaataata-gacactggggaccactgagtggggagggagagagtggggcaagg--ttgaaaaactgttgggtactatgctcagtagctgcgtgtcgggatcattgttaccccagacctcagcattgtacaatataccct-ggtaacagacctgcacatgt--acccactgaatcgaaaataaaagttgaaaaGTAATGAATAAAAATGAAATAAAATAACGT s panTro4.chr3 13796313 435 - 202329955 ttatatATAATATAAAGG-AAAATACTATATA--TCTCT-------------CCCTCTCTC-------------------CAggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-agcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtaccacatgttctcacttataagtgagag-ttaaa---------------------------cattgggtaatcatggagataaagatggtaataata-gacaccggggaccactgagtggggagggagagagtggggcaagg-gttgaaaaactgttgggtactatgctcagtagctgggtgttgggatcattattaccccagacctcagcattgtacaatataccct-ggtaacagacctgcacatgt--accccctgaatcgaaaataaaagttgaaaaaTAATGAATAAAAATGAAATAAAATAACTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13778721 450 - 202140232 TTATATATAATATAAAGGAAAAATGCTATCT---TCTCT-------------CTCTCTTcc-------------------agggaatacttatgcagccataaaaaaggaaataaaaatcatgtttctttgcaagcaacattggatgcagctggaaggtcattatcctaagcaaaatgaatggcaggaacaagaaaaacaagtaccacatgttctcacttataagtgagagtttaaa---------------------------aattgggtaatcatggagataaagatggtaataatatgacactggggaccactgagtggggagggagaaagtgggccaaggggttgaaaaactgttgggtactatgctccgtagctgggtgtcgggatcattattaccccagacctcagcatcgtacactataccctgggtaacagacctgcacatgt--acccccgaattcaaaaataaaagttgaaaaaTAATGAATAAAAATGAAATAAAATAACTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14330352 433 - 123690457 ttatatataatataAAGG-AAAATActatctc--tctct-------------ctctctc---------------------CAggaatat-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-agcaacatt-gatgcagctgg-aggtgattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtaccacatgttctcacttataagtgagag-ttaaa---------------------------cactgggtaatcatggagataaagatggtaacaaca-gacactggggaccactgagtggggagggagagaggggggcaaag-gttgaaaaactgttgggtactatgctcagtacctgggtgtcggggtcattattaccccagacctcagcatcgtacaatatgccct-ggtaacagacctgcacatgt--accccctgaatcgaaaataaaagttgaaaaaTAATGAATAAAAATGAAATAAAATAACTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103623854 425 + 192599291 TTATATATAACATAAAGG-AAAATATTATATA----TCT-------------CTCTCTCTC-------------------CAggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-tgcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaa------------------------------------taaannnnnnnnnnnnnnnnnnnnnnnnnnnnattgggtaatcatggagataaagatggtaacaata-gacactggggaccactgagtggtgaaggagagagtggggcaacg-gttgaaaagctcttgggtactatgctcagtacctgggtgtcgggatcattattaccccaaacctcagcatcgtacaatataccct-ggtaacagacctgcacatgt--atcccctgaatcgaaaataaaagttgaaaaataataaaTAAAAATGAAACAGAATAACTT i rheMac3.chr2 I 1164 C 0 s macFas5.chr2 103267373 437 - 192460366 ttatatataacataaagg-aaaatattatatatCTCTCT-------------CTCTCTCTC-------------------CAggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-tgcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtatcacatgttcttacttataagtgagag-ttaaa---------------------------cattgggtaatcatggagataaagatggtaacaata-gacactggggaccactgagtggtgaaggagagagtggggcaacg-gttgaaaagctcttgggtactatgctcagtacctgggtgtcgggatcattattaccccaaacctcagcatcgtacaatataccct-ggtaacagacctgcacatgt--accccctgaatcgaaaataaaagttgaaaaataataaaTAAAAATGAAACAGAATAACTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101061056 435 + 187378091 ttatatataacataaagg-aaaatattatata--tatat-------------ctctctctc-------------------caggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttctttgc-agcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtatcacatgttctcacttataagtgagag-ttaaa---------------------------CATTGGGTAATCATGGAGATAAAGATggtaacaata-gacactggggaccactgagtggggaaggagagagtgGGGCAACG-GTTGAAAAActcttgggtactatgctcagtacctgggtgtcGGGATCATTattaccccaaacctcagcatcgtACAATATACCCt-ggtaacagacctgcacatgt--accccctgaatcgaaaataaaagttgaaaaataataaataaaaatgaaacagaataactT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4925701 435 + 91754291 ttatatataatataaagg-aaaatattatata--tatct-------------ctctctctc-------------------caggaatac-tatgtagccataaaaaagaa---caaaatcatg-ttctttgc-agcaacatt-gatgcagctgg-aggtcattatcctaagc-aaatgaat-gcaggaac-agaaaaacaagtatcacatgttctcacttataagtgagag-ttaaa---------------------------cattgggtaatcatggagataaagatggtaacaata-gacactggggaccactgagtggggaaggaaagagtggggcaagg-gttgaaaaactcttgggtactatgctcagtacctgggtgtcgggatcattattaccccaaacctcagcatcgtacaatataccct-ggtaacagacctgcacatgt--accccctgaatcgaaaataaaagttgaaaaataataaaTAAAAATGAAACAGAATAACTT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92404934 469 - 98464013 ttatatATCATataaagg-aaagtaccatata--tatatacacacacacacacacgcacacacacatgcacacacacacacaggaatac-tatgcagccataaaaaagaa---caaaatcatg-ttttttac-agcaacatt-gatgcagctgg-aggtcattatcctaagc-aaacgcag-gcaggaac-agaaaaataagtaccacctgctctcacttctaagtcagag-ttaaa---------------------------cattgggtaatcatggagataaagatggcaacaata-gacactggggaccgctgggtggggagggagagggtgggggaagg-gttgaaaaactattgggtactaggctcagtacctgggtgatgaggtactgagcatcacaaacctcagcatcacataacataccct-ggtaacagacctgcacatgttccccccccaaatcaaaaataaaagtcgaaaaaTCTTAAGTAAAAATGAAATACAGTAACTG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24781308 0 - 42124431 C a score=469136.000000 s hg38.chr3_KI270781v1_alt 47465 145 + 113034 AATTGGGACTTGCTCAGTTGGATATAT------GGATAATTGTATATAATATGCTTCAATATTTTTACCTTTGTGCCTTTTTTT-GATAGTACAAGCCTCCTGAAAGACATTTTTTT-AAATC-AACATTGAAAGAATGCAACTGTACATTTTA s panTro4.chr3 13796748 146 - 202329955 AATTGGGACTTGCTTAGTTGGATATAT------GGATAATTGTATACAATATGCTTCAATATTTTTACCTTTGTGCCTTTTTTT-GATAGTACAAGCCTCCTGAAAGACATTTTTTTTAAATC-AACATTGAAAGAATGCAACTGTACATTTTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13779171 146 - 202140232 AATTGGGACTTGCTCGGTTGGATATAT------GGATAATTGTATACAATATGCTTCAATATTTTTACCTTTGTGCCTTTTTTT-GATAGTACAAGCCTCCTGAAAGACATTTTTTT-AAATCAAACATTGAAATAATGCAACTGTACATTTTA i ponAbe2.chr3 C 0 I 5 s nomLeu3.chr11 14330785 145 - 123690457 AATTGGGACTTGCTCAGTTGGATAGAT------GGATAATTGTATACAATATGCTTCAATATTTTTACCTTTGTGCCTTTTTTT-GGTAGTACAAGCCTCCCGAAAGACATTTTTTT-AAATC-AACATTGAAATAATGCAACTGTACATTTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103624279 145 + 192599291 AATTGGAACTTGCTCAGTTGGATATAT------GGAAAATTGTATACAATATGCTTCAATGTTTTTACCTTTGTGCCTGTTTTT-GATAGCACAGGCCTCCTGAAAGACATTTTTTT-AAATT-AACATGGAAATAACGCAACTGTACATTTTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103267810 145 - 192460366 AATTGGAACTTGCTCAGTTGGATATAT------GGAAAATTGTATACAATATGCTTCAATGTTTTTACCTTTGTGCCTGTTTTT-GATAGCACAGGCCTCCTGAAAGACATTTTTTT-AAATC-AACATGGAAATAACGCAACTGTACATTTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101061491 145 + 187378091 AATTGGAACTTGCTCAGTTGGATATAT------GGAAAATTGTATACAATATGCTTCAATGTTTTTACCTTTGTGCCTGTTTTT-GATAGCACAGGCCTCctgaaagacattttttt-aaatc-aacattgAAATAACGCAACTGTACATTTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4926136 145 + 91754291 AATTGGAACTTTCTCAGTTGGATATGT------GGAAAATTATATACAATATGCTTCAATGTTTTTACCTTTGTGCCTGTTTTT-GATAGCACAGGCCTCCTGAAAGACATTTTTTT-AAATC-AACATTGAAATAACGCAACTGTACATTTTA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92405403 140 - 98464013 AATTGGGACTTGCTCGGTTGGATGTGT------GGACGCTGGTATACAATATGCTTCAATGTGGTTACCTCTGTGCC----TTT-CATAGTCCGGACCTCCTGAAAGAC-CTTCTTT-AAATC-AACATTGAAATAATGCAACTGTACGTTGTA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24781308 151 - 42124431 AATTGGGACTTGCTCGGGTAGATATATGGAGACGGAGAGCTGTGTACAACATGCTTTCATATATTTACCTCTATGTCTTTTTTCAGATAGTACAGATCTTCTGGAACATAGTTTCTT--GGTT-AACATTACAAAAATGCAACCCTACGTTTCA i canFam3.chr34 C 0 C 0 a score=412318.000000 s hg38.chr3_KI270781v1_alt 47610 147 + 113034 CGTGATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCTAGGGTTATTTTATTTCATCAGGTGGTGGAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATAAGAGACTA-CAAGAGGTCTCAGAGAGG-TTAAGCCTTCAAAGG s panTro4.chr3 13796894 147 - 202329955 CATGATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCTAGGGTTATTTTATTTCATCAGGTGGTGGAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATAAGAGACTA-CAAGAGGTCTCAGAGAGG-TTAAGCCTTCAAAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13779322 150 - 202140232 CATAATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCTAGGGTTATTTTATTTCATCAGGTGGTGGAGAATAAAGGCTAAGTTGGTAAGAAGAAACTATCAAATAAGAGACTACCAAGAGGTCTCAGAGAGGATTAAGCCTTCAAAGG i ponAbe2.chr3 I 5 C 0 s nomLeu3.chr11 14330930 146 - 123690457 CATGATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCT-GGGTTATTTTATTTCATCAGGTGGTGGAGAATAAACGCTAAGCTGG-AAGAAGAAACTGTAAAATAAGAGACTA-CAAGAGGTCTCAGAGAGG-TTAAGCCTTCAAAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103624424 147 + 192599291 CATGATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCTAGGGTTATTTTATTTCATCAGGTGGTGAAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATCAGAGACTA-CAAGAGGTCTCAGAGAGG-TTATGCCTTCAAAGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103267955 147 - 192460366 CATGATGAAGTTTTGGACCCTGTTTATTTCATTGTGGTCTAGGGTTATTTTATTTCATCAGGTGGTGAAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATCAGAGACTA-CAAGAGGTCTCAGAGAGG-TTATGCCTTCAAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101061636 147 + 187378091 CATGATGAAGTTTTGGACCctgtttatttcattgtggtctagggttattttatttcatcaggTGGTGAAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATCAGAGACTA-CAAGAGGTCTCAGAGAGG-TTATGCCTTCAAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4926281 147 + 91754291 CATGATGAAGTTTTGGACCGTGTTTATTTCATTGTGGTCTAGGGTTATTTTACTTCGTCAGGTGGTGAAGAATAAAGGCTAAGTTGG-AAGAAGAAACTGTAAAATCAGAGACTA-CAAGAGGTCTCAGAGAGG-TTATGCCTTCAAAGG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24781459 124 - 42124431 CAGGGTTGAGTTTTGTACCCCATTTATTTCATTGTGGCCTGGGGTTATTTTGTGTCATCGGGTGGTGGAGAATAGAGGCTGGATTGG-AA-----------------------TA-CAAAACATCTTAGAGAAG-TCAGGCCTTCAAAGG i canFam3.chr34 C 0 C 0 e calJac3.chr15 92405543 0 - 98464013 C a score=2005029.000000 s hg38.chr3_KI270781v1_alt 47757 606 + 113034 CAGATCATT---------------GC-AACACTG-AAAATCTTG-AAAAACAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTTCTCAACGTGCTAAACATCTGGTGCTAA-TTTTT-TTAATGGCCTACAAA-CCCATGTTGCCAAGAAATTCTAGTTGAGGCTCAATCTGTGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTACTTTTTTCTGTGAAATACA-TTCCAAGGGTTTTGGATGCTGTCAGTGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGGCTTTTTTCATTTCTTAACCTTATCCATGTGAACAGGAGAGCTTCCTCGTTCCACTGGGAGATCTTATCCACTAGTAACGAAAATGTGCTCCACTGGTCTCATTACACAGCTGATATTCACCAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAAG-AAAAAAAT---TTCAGTTGGATTTTTT-CC---TATCATTCTAATAACCTATAAACCACTGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTCTGCAATCATTTATATTATGC-TGAA-AGA- s panTro4.chr3 13797041 605 - 202329955 CAGATCATT---------------GC-AACACTG-AAAATCTTG-AAAACCAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTTCTCAATGTGCTAAACATCTGGTGCTAA-TTTTT-TTAATGGCCTACAAA-CCCATGTTGCCAAGAAATTCTAGTTGAGGCTCAATCTGTGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTATTTTTTTCTGTGAAATACA-TTCCAAGGGTTTTGGATGCTGTCAGTGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGGCTTTTTTCATTTCTTAACCTTATCCATGTGAACAGGAGAGCTTCCTCGTTCCACTGGGAGATCTTATCCACTAGTAACGAAAATGTGCTCCACTGGTCTCATTACACAGCTGATATTCACCAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAAG-AAAAAAAT---TTCAGTTGCATTTTTT-CC---TATCATTCTAATAACCTATAAACCACTGGTAACTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTCTGCAATCATTTATATTATGC-TGAA--GA- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13779472 628 - 202140232 CAGATCATT--------------NGCAAACACTGAAAAATCTTGAAAAAACAACAAGGAATTTCAAAAATAAATAAAAATAACATACAATTTTCACAAAAATGCTTGTCTTCTCAATGTGCTAAACATCTGGTGCTAATTTTTT-TTAACGGCCTACAAACCCCATGTTGCCAAGAAATTCTAGTTGCGGCTCAATCTGTGGCACGTACAATATAAATGACAATGGGAAAGGGAAATTATTTTTTTCTATGAAATACATTTCCAAGGGTTTTGGATGCTGTCAGTGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGGCTTTTTTCATTTCTTAACCTTATCCATGTGAACAGGAGAGCTTCCTCGTTCCACTGGGAGATCTTATCCACTAGTAACGAAAATGTGCTCCACTGATCTCATTACACAGCTGATATTCAACAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAAGCAAAAAAAT---TTCAGTTGGATTTTTT-CC---TATCATTCTAATAACCTATAAACCACTGGTAATTTGAGTTGTTTTTCTACTAATATTATACTCGCTTACCCATAGTTCTGCAATCATTTATATTATGCATGAAGAGA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14331076 605 - 123690457 CAGATCATT---------------GC-AACACTG-AAAATCTTG-AAAAACAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATATTTGTCTTCTCAATGTGCTAAACATCTGGGGCTAA-TTTTT-TTAATGGCCTACAAA-CCCACGTTGCCAAGAAATTCTAGTTGAGGCTCGATCTGTGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTATTTTTTTCTATGAAATACA-TTCCAAGGGTTTTGGATGCTGTCAATGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGGCTTTTTTCATTTCTTAACCTTATCCATGTGAACAGGAGAGCTTCCTCATTCCACTGGGAGATCTTATCCACTAGTAATGAAAATGTGCTCCACTGATCTCATTACACAGCTGATATTCAACAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAAG-AAAAAAAT---TTCAGTTGGATTTTTT--C---TATCATTCTAATAACCTATAAACCACCGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTCTGCAATCATTTATATTATGC-TGAA-ACA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103624571 606 + 192599291 CAGATCACT---------------GC-AACACTG-AAAATCTTG-AAAAACAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTTCTCAGTGTGCTAAACATCTGGTGCTAA-TTTTT-TTAGTGGACTACAAA-CCCATGTTGCCAACAAATTCTAACTGGGGCTCAGTCTATGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTATTTTTTTCTATGAAATACA-TTCTAAGGGTTTTGAATGCTGTCAACGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGACTTTTTTCATTTCTTAACTTTATCCATGTGAACAGGAGAGCGTCCTCATTCCACTGGAAGATCTCATCCACTAGTAATGAAAATGTGCTCCACTGATCTCATTACACAGTTGATATTCAACAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAA--AAAAAAAT---TTCAATTGGATTTTTTTCC---TATCATTCTAATAACCTATAAACCACTGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTTTGCAATCATTTATATTATGC-TGAA-AGA- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103268102 606 - 192460366 CAGATCACT---------------GC-AACACTG-AAAATCTTG-AAAAACAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTTCTCAGTGTGCTAAACATCTGGTGCTAA-TTTTT-TTAGTGGACTACAAA-CCCATGTTGCCAACAAATTCTAACTGGGGCTCAGTCTGTGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTATTTTTTTCTATGAAATACA-TTCTAAGGGTTTTGAATGCTGTCAACGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGACTTTTTTCATTTCTTAACTTTATCCATGTGAACAGGAGAGCGTCCTCATTCCACTGGAAGATCTCATCCACTAGTAACGAAAATGTGCTCCACTGATCTCATTACACAGTTGATATTCAACAG-TTTCACCATCTCATTGGTTTTTCTTACAACAGTATCATCAGAATTCAGTGAA--AAAAAAAT---TTCAATTGGATTTTTTTCC---TATCATTCTAATAACCTATAAACCACTGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTTTGCAATCATTTATATTATGC-TGAA-AGA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101061783 606 + 187378091 CAGATCACT---------------GC-AACACtg-aaaatcttg-aaaaacaacaaggaattc--aaaataaat-aaaataacatacaattttcac-aaaatGTTTGTCTTCTCAGTGTGCTAAACATCTGGTGCTAA-ttttt-ttAGTGGACTACAAA-CCCATGTTGCCAACAAATTCTAACTGGGGCTCAGTCTGTGGCACGTACAATAT-AATGACAATGGGAAaggg-aattatttttttctatgaaatacA-TTCTAAGGGTTTTGAATGCTGTCAACGCCTTTGTATACATTGCcagtaattttgaaaataaattttcactgTGACTTTTTTCGTTTCTTAACTTTATCCATGCGAACAGGAGAGCGTCCTCATTCCACTGGAAGATCTCATCCACTAGTAACGAAAATGTGCTCCACTGATCTCATTACACAGTTGATATTCAACAG-TTTCACCATCTCATTGATTTTTCTTACAACAGTATCATCagaattcagtgaa--aaaaaaat---ttcaattggatttttttcc---tatcATTCTAATAACCTATAAACCACTGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CCATA-TTTTGCAATCATTTATATTATGC-TGAA-AGA- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4926428 606 + 91754291 CAGATCACT---------------GC-AACACTG-AAAATCTTG-AAAAACAACAAGGAATTC--AAAATAAAT-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTTCTCAGTGTGCTAAACATCTGGTGCTAA-TTTTT-TTACTGGCCTACAAA-CCCATGTTGCCAACAAATTCTAACTGGGGCTCAGTCTGTGGCACGTACAATAT-AATGACAATGGGAAAGGG-AATTATTTTTTTCTATGAAATACA-TTCTAAGGGTTTTGAATGCTGTCAACGCCTTTGTATACATTGCCAGTAATTTTGAAAATAAATTTTCACTGTGGTTTTTTCCATTTCTTAACCTTATCCATGCGAACAGGAGAGCGTCCTCATTCCACTGGAAGATCTCATCCACTAGTAACGAAAATGTGCTCCACTGATCTCATTACACAGTTGATATTCAACAG-TTTCATCATCTCATTGATTTTTCTTACAACAGTATCATCAGAATTCAGTGAA--AAAAAAAT---TTCAATTGGATTTTTTCCC---TATCATTCTAACAACCTATAAACCACTGGTAATTTGAGT--TTTTTCTA-TAATATTATACT-GCTTA-CTATA-TTTTGCAATCATTTATATTATAC-TGAA-AGA- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92405543 576 - 98464013 CAGATCATG---------------GC-AACTCTG-AAAATCTGG-ATAAACAATGAAGAATTC--AAAATAAAC-AAAATAACATACAATTTTCAC-AAAATGTTTGTCTGCCCAGGGCGCCAAACATCTGGTGCCAA-TTTTTCTTGATGGCCTGCAAA-CCCACGTTGCCAACAAATTCTAGTCGAGGCTCAATCTGTAGCATGTACCATAT-AATGACAACAGGAAAGGG-AGTTAC-TTTTTCTGTGAAATACA-TTCTAACGGCTTTGCATGCTGTCAACGCCTTTGTATACATTGTCAGCGATGTTGAAAATACATTTTCATTGTGGCTTTTTTCATTTCTTAGCCTTATCCACGTGAGCAGGAGCGCTTCCCCATCCCACCGGGAGAGCTCATCCACTGGTAATGAAATCGCG----------CTCATTACACAGCTGATAGTCA----------------CGTTGGTTTTTCTTAGCACAGTATCATCAGAATTCAATAAA--AAAAAAA----CTCGGTTGGATTTTTTTCC---TATCATTCTAATAACCTATAAACCACTGGTAATTTGAGT--TTTT-----CTACATTATACT-GCTCA-CCATA-TTTTGCAATCATTTATTTTATGC-TGAA-AGA- i calJac3.chr15 C 0 I 303 s canFam3.chr34 24781583 615 - 42124431 TGGACCACTTGGGACGGAATCAGAGT-AATAGTA-AAGATCCTG-GAGAACAGCAAGGAATCC--AAAGTCAAT-GAAATAATACACGATTTTCAC-AAAATATTTTTCTTTGCATTGTGCTAAACATCTGGTGTTAATTTTTT-TTAAAGGCCTACAAATCCCA---TGCCAACAAATTGTAGCTGAGGCTCAATCTGTGGCACATAC------AATGACATTGGGAAAGGG-AATTGTTTTT---TATGGAATTAT-TTTTAAGGGTTTCGATCACTGTCAACGCCTTTGTAGCCATTGTCAGTAACTTCGAGAATAAATTTCCACTCTGGCTGTTTTCATTCCTTAACCTTATCCATGTGAACAGG-GAGCTTCCTTATCCCACCAGG-GCTCTCATTCGCTAGTAACAAAAATGAGCTTGCCTGATCTCATTACACAGATGATAGTCAACAGCTTTCACCATCTCATTGATGTTTCTTAGAACAGTATCATCAGAATTAGTGGAA--GAAAAAATCAATTCAACTGGACTTTTTTTCTGTTATTATTCTAGTAACCTATCATTTGCTGGTAACTTGAGT--TTCTTCTA-CAA---TGGGTT-GCCTA-TTCTA-TTTTGCAAGCATTTGTATTATTT-TGAA-AGAA i canFam3.chr34 C 0 C 0 a score=1282831.000000 s hg38.chr3_KI270781v1_alt 48363 388 + 113034 ATTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAACA-TTC-CGTGGCTATTCTAG-TTTCAAAC---TTC---TTTAAATCTCAGAAGTATGATATGCTGCCAACTT-TATAAATGTATTTCTTTATACAATC---TTTATTTTCTGTCTTCTTG--TGGTCACTGTTTATTTTAAAAGAAGTGTAGAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGTTTTTAACATTCAGCTGAATAATACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCCTGTGTAGAGGTAG--TAGCCATGAAGAGGACAGTTACAATGGACACT-AATTAGATGATGCCaataatataagcaggatcg s panTro4.chr3 13797646 388 - 202329955 ATTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAACA-TTC-CGTGGCTATTCTAG-TTTCAAAC---TTC---TTTAAATCTCAGAAGTATGATATGCTGCCAACTT-TATAAATGTATTTCTTTATACAATC---TTTATTTTTTGTCTTCTTG--TGGTCACTGTTTATTTTAAAAGAAGTATAGAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGTTTTTAACATTCAGCTGAATAATACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCCTGTGtagatgtag--tcgccatgaagaggacagttacaatgcaaact-aatttgatgatgccaataatataagcaggatgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780100 397 - 202140232 ATTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAACATTTC-CGTGGCTATTCTAGTTTTCAAAC---TTCAATTTTAAATCTCAGAAGTATGATATGCTGCCAACTTCTATAAATGTATTTCTTTATACAATCCATTTTATTTTTTGTCTTCTTG--TGGTC-CTGTTTATTTTAAAAGAAGTATAAAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATGTAAAAACCAAGTTTTTAACATTCAGCTGAATAATACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCCtatgtagatgcag--tcaccatgaagaggacagttacaatgcagacgaaatttgatgacgccaataatataagcaggatcg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14331681 387 - 123690457 ATTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAATA-TTT-CGTGGCTATTCTAG-TTTCAAAC---TTC---TTTAAATCTCAGAAATATGATATGCTGCCAACTT-TATAAATGTATTTCTTTATACAATC---TTTATTTTTTG-CTTCTCG--TGGTCACTGTTTATTTTAAAAGAAGTATAGAATAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGTTTTTAACATTCAACTGAATAATACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGATGCTAAATCAGTATAT---TCCTATGtagatgtag--tcgccatgaagaggacagtcacaatgcagaca-aatttgatgatgccaataatataagcaggatcg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103625177 391 + 192599291 AGTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAACA-TTC-CGTGGCTATTCTAA-TTTCAAAC---TTC---TTTAAATCTCAAAAGTATGATATGCTGCCAACTT-TATAAATGTATTTCTTTACACAATC---TTTACTTCTTATCTTCTTG--TGGTTACTGTTTATTTTAAAAGAAATGTACAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGCTTTTAACATTCAGCTGAATATTACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATATTTATCCTATGTAGATGTAG--TCACCACGAAGAGGACAGTTACAGTGCAGACA-AATTTGATGACTCCAATAATATAAACAGGATCG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103268708 388 - 192460366 AGTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTACCA-TTC-CGTGGCTATTCTAA-TTTCAAAC---TTC---TTTAAATCTCAAAAGTATGATATGCTGCCAACTT-TATAAATGTATTTCTTTACACAATC---TTTACTTCTTATCTTCTTG--TGGTTACTGTTTATTTTAAAAGAAATGTACAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGCTTTTAACATTCAGCTGAATATTACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCCTATGtagatgtag--tcaccacgaagaggacagttacagtgcagaca-aatttgatgactccaataatataaacaggatcg i macFas5.chr2 C 0 I 322 s papAnu2.chr2 101062389 386 + 187378091 AGTAGCAACAACTTTACCTTCTACTCAgagat-ttttctttaaca-ttc-CGTGGCTATTCTAA-TTTCAAAC---TTC---TTTAAATCTCAAAAGTATGATATGCTGCCAactt-tataaatgtatttctttacacAATC---TTTACTTCTTATCTTCTTG--TGgttactgtttattttaaaagaaatgtacagTA-GCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGCTTTTAACATTCAGCTG-ATATTACTCACCCTTTTCCTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCCTATGTAGATGTAG--TCGCCACGAAGAGGACAGTTACAGTGCAGACA-AATTTGATGACTCCAATAATATAAACAGGATCG i papAnu2.chr2 C 0 I 322 s chlSab2.chr15 4927034 388 + 91754291 AGTAGCAACAACTTTACCTTCTACTCAGAGAT-TTTTCTTTAACA-TTC-CGTGGCTATTCTAA-TTTCAAAC---TTC---TTTAAATCTCAAAAGTATGATATGCTGCCAACTT-TATAAATGTATTTCTTTACACAATC---TTTACTTTTTATCTTCTTG--TGGTTACTGTTTATTTTAAAAGAAGTGTACAGTAGGCATATTGACAACTCTCCACATGTGGGAAGATATAAAAACCAAGCTTTTAACATTCAGCTGAATATTACTCACCCTTTTCTTCCATATTTGACATTTTGCCATAGAGGCTAAATCAGTATAT---TCTTATGtagatgtag--tcgccacgaagaggacagttacagtgcagaca-aatttgatgactccaataatataaacaggattg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92406422 385 - 98464013 aaTAGCAACAACTTTACCTTCTACTCAGAAAT-TTTTCTTTAACA-TTT-CGTGGTTATTCTAGCTTTCGAAC---------TTTAAATCTCAGAAGAATGGTATGCTGCCACCTT-CATACATGGATTTCTTTATACAATC---CTTGTTTTTTATCTTCTTG--TAGTCACTGTTTATTTTAAAAGAAGTATAGAGTAGGCCTATTGACAACTCTCCACATGTGGGAAGATAC-AAAACCAAATTTTTAGCATTCAGCTGAATATTGCTCACCCTTTTCCTCTGTATTTGACATTTTGTCATAGAGGTGAAATCAGTATAT---TCCTATGtagatgtag--tcaccatgaagagggcagttatacagcagaca-aatttgatgattccaataatatgagcagaatcg i calJac3.chr15 I 303 C 0 s canFam3.chr34 24782198 385 - 42124431 AACAGCAACAACTTTACCTTCTAGTCAAAGATGTTGTTTTTAGCA-TTCAAGTGAAAATTCTAGTTTTCAAACTTTTTC---TTTAAATCTCAGATGAATGATACACTGCCAGCAT-AATAAATG----TCTTTGTAGAACC---TTCGCTTTA-----TCTTGAAAGGTCACTGTTTACTTAAAAAGAACTGCAGAGCTGGCACATTGGCAACTGTTCGCATATGGGCAGATAT-AAAACCAGATTTTCAGTATTCAACTGAATATTGTTGA-CTGTTTCCTTTATATTTGACATTTTGAGACACGGGCTAAATCAGTGTAT---TACCATGtaaatgtagaatcaccatgaagaagacagttaacatgcag-ta-gatttggtggctccagtgata-aaggaggattg i canFam3.chr34 C 0 C 0 a score=30200.000000 s hg38.chr3_KI270781v1_alt 48751 9 + 113034 ccatccgtg s panTro4.chr3 13798034 9 - 202329955 ccatccgtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780497 9 - 202140232 ccatctgtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332068 9 - 123690457 ccatcggtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103625568 9 + 192599291 CCATCTGTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103269418 9 - 192460366 ccatccgtg i macFas5.chr2 I 322 C 0 s papAnu2.chr2 101063097 9 + 187378091 ccATCCGTG i papAnu2.chr2 I 322 C 0 s chlSab2.chr15 4927422 9 + 91754291 ccatctgtg i chlSab2.chr15 C 0 I 323 s calJac3.chr15 92406807 9 - 98464013 ccatccgtg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24782583 9 - 42124431 ctgtcaatg i canFam3.chr34 C 0 C 0 a score=25704.000000 s hg38.chr3_KI270781v1_alt 48760 7 + 113034 acttttc s panTro4.chr3 13798043 7 - 202329955 acttttc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780506 7 - 202140232 acttttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332077 7 - 123690457 acttttc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103625577 7 + 192599291 ACttttc i rheMac3.chr2 C 0 I 1268 s macFas5.chr2 103269427 7 - 192460366 acttttc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063106 7 + 187378091 ACTTTTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4927754 7 + 91754291 acttttc i chlSab2.chr15 I 323 C 0 s calJac3.chr15 92406816 7 - 98464013 acttttc i calJac3.chr15 C 0 C 0 s canFam3.chr34 24782592 7 - 42124431 actttga i canFam3.chr34 C 0 C 0 a score=266744.000000 s hg38.chr3_KI270781v1_alt 48767 114 + 113034 aaaatggtgaactcttgacaaattttcaaataaagcactgcgccgtatttccttgatgtatgcat--ttgatgct--tcctagga---aatttagtac------ttactaaacct---tgac---------aaaaaaaa s panTro4.chr3 13798050 114 - 202329955 aaaatggtgaactcttgacaaattttcaaataaagcactgcgccgtatttccttgatgtatgcac--ttgatgct--tcccagga---aatttagtac------ttactaaacct---tgac---------caaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780513 128 - 202140232 aaaatggtgaactcttgacaaagtttcaaataaagcactgtgccatctttccttgatgtatgcacggttgatgcttatcctaggagagaatttagtac------ttactaaactcctatgac-----aagaaaaaaaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332084 114 - 123690457 aaaatggcgaactcttgacaag-tttcaaataaagcactgtgccatctttccttgatgtacgcac--ttgatgct--tcctagga---aatttagtac------ttactaaatct---tgac--------acaaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103269434 120 - 192460366 aaaatggtgaactcttgacaaagtttcaaataaagcactgtgccatctttccttgatgtatgcac--atgatgct--tcctagga---aatttaatgcagtatattactaaacct---tgac---------aaaaaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063113 120 + 187378091 AAAATGGTGAACTCTTGACAAAGTTTCAAATAAAGCACTGTGCCATCTTTCCTTGATGTATGCAC--TTGATGCT--TCCTAGGA---AATTTAATGCAGTATATTACTAAACCT---TGAC---------aaaaaaaG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4927761 120 + 91754291 aaaatggtgaactcttgacaaagtttcaaataaagcactgtgccatctttccttgatgtatgcac--ttgatgct--tcctagga---aatttaatgcaatatattactaaacct---tgac---------aaaaaaag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92406823 123 - 98464013 aaaatggtgagctcttgacaaagtttcaaataaagcccagcgccatctttcctggatttacgcac--ttgatgcc--tcctagga---aagttggtac------ttattaaatct---tgacaaaaaaaaaaaaaaaat i calJac3.chr15 C 0 C 0 s canFam3.chr34 24782599 110 - 42124431 aaaacagtgaactc--agtaaagttttaaatacaata--gcacaacctttccttgatgtatacaa--ttgttgct--tcctagga---aatttggtgc------ttattaaacct---tgct---------ttaaaaaa i canFam3.chr34 C 0 I 319 e rheMac3.chr2 103625584 1268 + 192599291 I a score=320798.000000 s hg38.chr3_KI270781v1_alt 48881 138 + 113034 cccactttgtattcacttataaaatggaattcgttc--taggctcaaataattagaagcaggtttttcacctatataaTTCTAGGTTCAGTTAGATTTTA-AATTGGATTGTCATAAATAGGTTTGTTGtatttatttatt s panTro4.chr3 13798164 139 - 202329955 cccactttgtattcacgtataaaatggaattcgttc--taggctcaaataattagaagcaggtttttcacctatataattctaggttcagttagattttagaattggattgtcataaataggtttgttgtatttatttatg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780641 141 - 202140232 cccactttgtattcacttataaaatggaattcgttcggtaggctcaaataattagaagcaggtttttcacctatataaTTCTAGGTTCAGTTAGATTTTAGAATTGGATTGTCGCAAATAGGTTTGTTGTAtttatttatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332198 139 - 123690457 cccactttgtatttacttataaaatggaatttgttc--taggctcaaataattagaagcaggtttttcacctatataaCCCTAGGTTCAGTTAGATTTTAGAATTGGATTGTCATAAATAGGTTTGTTGTAtttatttttt i nomLeu3.chr11 C 0 I 295 s macFas5.chr2 103269554 139 - 192460366 cccactctgtattcacttataaaatggaattcattc--taggctcaaataattagaagcaggtttttcacctatataaTTCTAGGTTCAGTTAGATTTTAGAATTGGATTGTCATAAGTAGGTTTGTTGTATTTATTCAtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063233 139 + 187378091 CCCACTCTGTATTCACTTATAAAATGGAATTCATTC--TAGGCTCAAATAATTAGAAGCAGGTTTTTCACCTATATAATTCTAGGTTCAGTTAGATTTTAGAATTGGATTGTCATAAGTAGGTTtgttgtatttattcatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4927881 139 + 91754291 cccactctgtattcacttataaaatggaattcattc--taggctcaaataattagaagcaggtttttcacctatataaTTCTAGGTTCAGTTAGATTTTAGAATTGAGTTTTCATAAGTAGGTTTGTTGTATttattcatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92406946 127 - 98464013 cccactttgtattaacttataaaatggaatccgttc--taggctcaaataattagaagcaggtttttcacctatataaTTCTAGGTTCAGTTAGATTTTAGAATTGGATTGTCATAAATAGGTTTCTTG------------ i calJac3.chr15 C 0 C 0 e rheMac3.chr2 103625584 1268 + 192599291 I e canFam3.chr34 24782709 319 - 42124431 I a score=611216.000000 s hg38.chr3_KI270781v1_alt 49019 298 + 113034 tatt-tatttatt--tattat--t-----ttttgagacagagtcttgctctgtcacccaggctagagtgcagtggcaagatctcag-tcactgcaacctcca-ccccccaggttcaagcgattctcctgcctcagcctcccgagtagctagggctataggcacacaccaccattctcaactaatttttgtatgtttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtgatctacccacctcagcctctcaaagtgctgaaattaccagcgtgagccaccatgtccggtcAG s panTro4.chr3 13798303 294 - 202329955 tatt-tatttatt------at--t-----ttttgagacagagtcttgctctgtcacccaggctagagtgcagtggcgagatctcag-tcactgcaacttcca-acccccaggttcaagcaattctcctgcctcagcctcccgagtagctagggctataggcacacaccaccattctcaactaatttttgtatttttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtgatctatccacctcagcctctcaaagtgctgaaattaccagcttgagccaccatgtccagtcag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13780782 287 - 202140232 tatt---------------at--t-----ttttgagacaaagtcttgctctgtcgcccaggctagagtgcagtggcaagatctcgg-tcactgcaacctccacccccccaggttcaagcaattctcctgcctcagcctcccgagtagctagggctacaggcacacgccaccattctcaactaatctttgtatttttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtgatctacccacgtcagcctctcaaagtgctgaaattaccagtgtgagccaccatgtccagccAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332632 289 - 123690457 TAtt-tatttatt--tattat--t-----ttttgagacagagtctcgctctctcacccaggttagagtgcagtggcacaatctcag-tcactgcaaccttca-ccccccaggttcaagcgattctcctgcctcagcctcccgagtagctagggctacaggcacacaccaccactctcaactaatttttgtatttttagtagacatggggtt--------ttgcctaggctggtctcaaactcctaacttccagtgatctacccacctcagcctctcaaagtgctgaaattaccagcgtgaacca---------GCCAG i nomLeu3.chr11 I 295 C 0 s macFas5.chr2 103269693 303 - 192460366 tattattattatt----ttat--tttttatttttagatggagtcttgctctgtcgcccaggctagagtgtagtggcacgatctcagctcactgcaacctcca-actctcaggttcaagtgattctcctgcctcagcctcccgagtggctaaggctacaggcacatgccaccattctcagctaatttttgtatttttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtaatctacccacctcagcatctcaaagtgctgaaattaccagcatgagccaccgtgtccagccAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063372 309 + 187378091 tattattattattattattattattattattattagatggagtcttgctctgtcgcccaggctagagtgtagtggcacgatctcggctcactgcaacctcca-actctcaggttcaagtgattctcctgcctcagcctcccgagtggctaaggctacaggcacatgccaccattctcagctaatttttgtatttttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtaatctacccacctcagcatctcaaagtgctgaaattaccaGCATGACCCACCGTGTCCAGCCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4928020 301 + 91754291 tattattattattattattat--------ttttgagatggagtcttgctctgtcacccaggctagagtacagtggcacgatctcggctcactgcaacctcca-actcccaggttcaagcgattctcctgcctcagcctcccgagtggttagggctacaggcacacgccaccattctcagctaatttttgtatttttagtagagacggggtt--------ttgcctaggctggtctcaaactcctgacctccagtaatctacccacctcagcatctcaaagtgctgaaattaccagcatgagccaccgtgtccagccAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92407073 307 - 98464013 TATT-TATTTATT--TATGAA--t-----ttttgagacggagtcttgctctgttgcttaggctggagttcagtggcacaatctcagctcactgcaacctcca-cctcccaagttcaagcgattctcctgcctcagcttcccaagtagctaggactaccagtgcatgccaccacagctggctaactttggaatttttagtagagatagggtttcaccatgttggccaggctggtctcaaactcctgacctccagtgatctgcccgcctcggcctcccaaagtgcggaaatgaacagcatgaaccaccatgtcgggccAg i calJac3.chr15 C 0 I 443 e rheMac3.chr2 103625584 1268 + 192599291 I e canFam3.chr34 24782709 319 - 42124431 I a score=266116.000000 s hg38.chr3_KI270781v1_alt 49317 158 + 113034 GTTTGTTGTATT-AAAAGTCCTGAGGAAccaggagcggtggctcacacctataatcc-cagcactttgg-aaagcagaggcgggcagatctcttgaggtctggagttt-gaggccagactgaccaacagggcgaaaccccgtctctact-aaaaatatgaaaa s panTro4.chr3 13798597 159 - 202329955 gtttgttgtatttaaaagtcctgaggagccaggagtggtggctcacgcctataatcc-cagcactttgg-aaaccagaggcgggcagatctcttgaggtctggagttt-gaggccagactgaccaacagggcgaaaccccgtctctact-aaaaatatgaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13781069 162 - 202140232 GTTTGTTGTATTTAAAAGTCCTGAGGagccaggagtggtggctcacgcctataatcctcagcgctttgg-aaagcagaagtgggtagatctcttgaggtctggagtttggagaccagactgatcaacagggcgaaaccctgtctctactaaaaaatgtgaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14332921 159 - 123690457 GTTTGTTGTATTTAAAAGTCCTGAGGAgccacgagtggtggctcacgcctataatcc-cagcactttgg-aaagcagaggtgggcagatctcttgaggtctggagttt-gagaccagactgaccaacagggcgaaaccccgtccctact-aaaaataagaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103269996 160 - 192460366 GTTTGTTGTATTTAAAAGTCCTGAGGAgccaggcatggtggctcatgcctataatcc-cagcactttggaaaagcacaggcaggcagatctcttgaggtctggagtnt-gagaccagcctgaccaacatggcaaaaccctgtctctact-aaaaacatgaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063681 160 + 187378091 GTTTGTTGTATTTAAAAGTCCtgaggagccaggcatggtggctcatgcctataatcc-cagcactttggaaaagcacaggcaggcagatctcttgaggtctggagttt-gagaccagcctgaccaacatggcaaagccctgtctctact-aaaaacatgaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4928321 160 + 91754291 GTTTGTTATATTTAAAAGTCCTGAGGAgccaggcatggtggctcatgcctataatcc-cagcactttggaaaagcacaggcaggcagatctcttgaggtctggagttt-gagaccagcctgaccaacagggcaaaagcccgtctctact-aaaaacatgaaaa i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103625584 1268 + 192599291 I e canFam3.chr34 24782709 319 - 42124431 I e calJac3.chr15 92407380 443 - 98464013 I a score=304527.000000 s hg38.chr3_KI270781v1_alt 49475 147 + 113034 ttagcagggcatcgtggcgcctacctgtaatctcagctactcagaaggctgaggtgagagaatcac-ttgaacccgggaggcggagtttgcagtgagctgagatcgcgccattgcactccagcctgggtgacagagc-gagattccgtc s panTro4.chr3 13798756 147 - 202329955 ttagcagggcatcgtggcgcctacctgtaatctcagctactcaggaggctgaggtgagagaatcac-ttgaacctgggaggcggagtttgcagtgagctgagatcgcgccattgcactccagcctgggtgacagagc-gagattccgtc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13781231 147 - 202140232 ttagcagggcatggtggcacctatctgtaatctcagctactcaggaggctgaggtgagacaatcac-ttgaacccaggaggcggaggttgcagtgagctgagatcgcgccattgcactgcagcctgggtgacagagt-gagattccgtc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14333080 146 - 123690457 ttagcaaggcatggtagcgcccacctgtaatctcagctactcaggaggctgaggtgagagaatcactttgaacctgggagggggaggttgcaatgag-tgagatcacgccattgcactccagcct-ggtgacagagc-gagattccatc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103270156 148 - 192460366 ttagcagggcatggtggtgcccacctgtaatctcagctactcaggagactgaggtgggagaatcac-ttgaacccgggaggcacaggttgcagtgagatgagatcacaccattgcactccagcctgggtcacagagctgcagctccatc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101063841 148 + 187378091 ttagcagggcatggtggtgcccacctgtaatctcagctactcaggagactgaggtgggagaatcac-ttgaacccgggaggcacaggttgcagtgagatgagatcacgccattgcactccagcctgggtcacagagctggagctccatc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4928481 148 + 91754291 ttagcagggcgtggtggtgctcacgtgtaatctcagctactcaggagactgaggtgggagaatcac-ttgaacccgggaggcagaggttgcagtgagatgagatcgcgccattgcactccagcctgggtcacagagctggagctccatc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92407823 147 - 98464013 ttagccgggtgtggtggtgcccacctataatcccagctactcgggagactgaggtgagagaattac-ttgcacctggaaggcagaggttgtggtgagccgggatcacgccattgcaccccagcttgtgcaacagagc-aagacttcata i calJac3.chr15 I 443 C 0 e rheMac3.chr2 103625584 1268 + 192599291 I e canFam3.chr34 24782709 319 - 42124431 I a score=10152.000000 s hg38.chr3_KI270781v1_alt 49622 3 + 113034 tca s panTro4.chr3 13798903 3 - 202329955 tca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13781378 3 - 202140232 tca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14333226 3 - 123690457 tca i nomLeu3.chr11 C 0 I 28 s macFas5.chr2 103270304 3 - 192460366 tca i macFas5.chr2 C 0 I 16 s papAnu2.chr2 101063989 3 + 187378091 tca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4928629 3 + 91754291 tca i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92407970 3 - 98464013 tca i calJac3.chr15 C 0 C 0 s canFam3.chr34 24783028 3 - 42124431 tca i canFam3.chr34 I 319 C 0 e rheMac3.chr2 103625584 1268 + 192599291 I a score=2796546.000000 s hg38.chr3_KI270781v1_alt 49625 917 + 113034 aaataaataaataaataaaaTATAAATAAA--AGTCCTGAGGGACACACGAGAAATCTTTGTTGTACTAGTC---------TGACccaactaaatgccagcagtaacccctg-ttcatg-atgacaaaagaa--aaagccatgcaa--atctccaaaatacctctggga-gcagt-accatcctgcagagaaccattAATTTTTATAAAGATGCAATCACAC-TCTGTAGTTT-ACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTC-ACATAGAAGTGATcagagttgttttaaggcctttatg---aggctcagacccttttacttctggaagcccta-ccccaattatatcaagcatattaaaatgcaccttcatcct--aataaatataatAATAGCCAGgcttgttatgtgccagacaccattttaagtactttacaataactatttgaagtacgcactattattattcccattttacagataaggaaaaaggcacagagaggttcagtgacttgcccagaaccacacag--------tggtggagcc-aaaatataaagcttaga-actctgacaccaACATACTACAGCCTATATAACTCTTGTAGAGTTTACATCTAAGGATAAAGTATCATTTAT-GAGTTTGTCGCATTGGAGATGACTTCGCCttcatcaattttaattgtagagtttttattttgtattttgagtcaatcatttaatttgaggtgtgaaacattatcttaaggcccttgaaaggcccgt-ggcccccagTACCATTACCTGTAAGAGCATTGCCTGAGATTCTCCACGCACATTCAATCCAGCACCTTCATGCCTCGGGGAGACCCACGGAGGCACTCACTTTATCTCTCTGTCTATTTTTTAAtgtgtgcgtgtgtatgtgcgtgcgtgtgtgtgtgtg--------------------------------------------------------CGCGGACCA-AAATGATGAC s panTro4.chr3 13798906 925 - 202329955 aaataaataaataaataaaatataaataaa--agtcctgagggacacacgagaaatctttgttgcactagtc---------cgacccaactaaatgccagcagtaacccctg-ttcatg-atgacaaaagaa--aaagccatgcaa--atctccaaaatacctctggga-gcagt-atcatcctgcagagaaccattAATTTTTATAAAGATACAATCACAC-CCTGTAGTTT-ACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTC-ACATAAAAGTGATcagagttgttttaaggcctttatg---aggctcagacccttttacttccggaagcccta-ccccaattatatcaagcatattaaaatgcaccttcatcct--aataaatataatAATAGCCAGgcttgttatgtgccagacaccattttaagtactttacaataactatttgaagtaggcactattattattcccattttacagataaggaaaaaggcacagagaggttcagtgacttgcccagaaccacacag--------tggtggagcc-aaaatataaagcttaga-actctgacaccaACATACTACAGCCTATATAACTCTTGTAGAGTTTACATCTAAGGATAAAGTATCATTTAT-GAGTTTGTCGCATTGGAGATGACTTCGCCttcaccaattttaattgtagagtttttattttgtattttgagtcagtcatttaatttgaggtgtgaaacattatcttaaggcccttgaaaggcctgt-ggcccccagTACCATTACCTGTAAGAGCATTGCCTGAGATTCTCCACACACATTCAATCCAGCACCTTCATGCCTCGGGGAGACCCACGGAGGCACTCACTTTATCTCTCTGTCTATTTTTTAAtgtgtgcatgtgtatgtgcgtgcgtgtgtgtgtgtg------------------------------------------------tgtgtgCGCGCGGACCA-AAATGATGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13781381 944 - 202140232 aaataaataaataaataaaatataaataaa--AGTCCTGAGGGACACACGAGAAATCTTTATTGTACTAGTC---------TGACCCAACTAAATGCCAGCAGTAAGCCCTG-TTCATGTACGACAAAAGAA--AAAGCCATGCAA--ATCTCCAGAATACCTCTGGGAGGCAGTAAACATCCTGCAGAGAACCATTAATTTTTATAAAGATACAATCACAC-TCTGTAGTTTAACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTCTACATAAAAGTGATcagagttgttttaaggcctttccgtgtaggctcagacccttttacttctggaagccctacccccaattatatcaagcatattaaaatgcactttcatcctacaataaatataatAATAGCCAGgcttgttatgtgccagacaccatttcaagtactttacaataactatttgaagtaggcactattattattcccattttacagataaggaaaaaggcacagaggggttcagtgacttgcccagaaccacacag--------tggtggagcc-gaaatataaagcttaga-actctgacaccaACATACTATGGCCTATATAATTCTTACAGAGTTTACATCTAAGGACAAAGTATCATTTTT-GAATTTGTCGCATTGGAGATGACTTTGCCtttgtcagttttaattgtagagtttttattttgaattttgagtcaatcatttaatttgaggtgtgaaacattatcttaaggcccttgaaaggcccctgggcccccagtaccattacctgtaatAGCATTGCTTGAGATTCTCCACACACATTCAATCCAGCACCTTCATGCCTCGGGGAGACCCACGGAGGCACTCACTTTATCTCTCTGTCTATTTTTTAATAtgtgcgtgtgtgtgtgcgtgcgtgtgtgtgtgtg--------------------------------------tgtgtgtgtgtgtgtgtgCGCGGACCA-AA---ATGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14333257 911 - 123690457 aaataaataaataaataaaatataaataaa--AGTCCTGAGGGACACACGAGAAAACTTTGTTGTACTAGTC---------TGACccaactaaatgccagcagtaacccctg-ttcatg-atgacaaaagaa--aaagccctgcaa--atctccaaaatacctctggga-gcagt-atcatcctgcagagaactattAATATTTATAAAGATACAATCACAC-TCTGTAGTTT-ACAATCTGAGTTACACCTGATTTACATAAAAATAC--AGTC-ACATAAAAGTGATcagagttgttttaaggcctttatg---aggctcggacccttttacttct-----------gcccaattatatcaagcgtattaaaatgcaccttcatcctataataaatataatAATAGCCAGgcttgttatgtgccagacaccattttaagtactttacaataacaatttgaagtaggcactcttattattcccattttacagataaggaaaaaggcacagagaggttcagtgacttgcccagaaccacacaa--------tggtggggcc-aaaatataaagcttaga-accctgacgccaaCATACTACGGCCTATATAACTCTTGTAGAGTTTACATCTAAGGATAAAGTATCATTTAT-GAGTTCGTTGCACTGGAGATGACTTCGCCtctgtcaattttaattgtagagtttttattttgtattttgagtcaatcatttaatttgaggtgtgaaatattatcttaaggcccttgaaaggcccct-ggcccccagTACCATTACCTGTAACAGCATTGCCTGCGATTTTCCACACACATTCAATCCAGCACCTTCATACCTCCGGGAGACCCACGGAGGCACTCACTTTA----TCTGTCTATTTTTTAAtgtgtgcatgtgtgtgtgcgtgcgtgtgtgtgtgtg--------------------------------------------------tgtgCGCGCAGACCA-CAGTGATGAT i nomLeu3.chr11 I 28 C 0 s rheMac3.chr2 103626852 896 + 192599291 aaataaataaataaataa---ataaataaatCAGTCCTGAGGGACACACGAGAAATCTTTGTTGTACTAGTC---------TGACcccactaaatgccagcagtaacgactg-ttcatt-atgacacaagaa--aaagccatgcaa--atctccaaaatatctctggga-gcagt-atcatcctgcagagaaccattAATTTTTATGAGGACACAATCACATTTCTATAGTTT-ACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTC-ACATAAACGTGATcagagttgttttaaggcctttatg---aggctcaggcccttttacttctggaagcccta-ccccaa-tatatcaagtatattaaaatgcaccttcatcctataataaatataatAATAGCCAGgcttgttatgtgccagacaccattttaagtactttacaataactctttgaagtaggcactattattattcccattttacagataaggaaacaggcacagagaggttcaatgacttggccagaaccacagag--------tggcggagcc-aaaatataaagcttagacactctgacatcaACATACTATGGCCTATATAACTCTTGTAGAGTTCATATTTAAGGAGAAAGTATCATTTTT-GAGTTTGTTGTACTGGAGATTacttcgcctttgtcaatttta--------------attttgcattttgagtcagtcatttaatttgaggtgtcaaacattatcttaaggcccttgaaaggcccct-ggtccccagtaccgttacctgtaACAGCATTGCCTGA-ATTCTCCACACACATTCAATCCAGCACCTTCATGCATCGGGGAGACCCACAGAGGCACTCACTTTA----TCTCTCTATTTTTTTATAtgtg--tgtgtgtgtgcatgcgtgtgcgtgtgtA----------------------------------------------------------TAGACCA-AAATGATGAC i rheMac3.chr2 I 1268 C 0 s macFas5.chr2 103270323 896 - 192460366 aaataaataaataaataa---ataaataaatCAGTCCTGAGGGACACACGAGAAATCTTTGTTGTACTAGTC---------TGACcccactaaatgccagcagtaacgactg-ttcatt-atgacacaagaa--aaagccatgcaa--atctccaaaatatctctggga-gcagt-atcatcctgcagagaaccattAATTTTTATGAAGACACAATCACATTTCTATAGTTT-ACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTC-ACATAAACGTGATcagagttgttttaaggcctttatg---aggctcaggcccttttacttctggaagcccta-ccccaa-tatatcaagtatattaaaatgcaccttcatcctacaataaatataatAATAGCCAGgcttgttatgtgccagacaccattttaagtactttacaataactctttgaagtaggcactattattattcccattttacagataaggaaacaggcacagagaggttcaatgacttggccagaaccacagag--------tggcggagcc-aaaatataaagcttagacactctgacaccaACATACTATGGCCTATATAACTCTTGTAGAGTTCATATTTAAGGAGAAAGTATCATTTTT-GAGTTTGTTGTACTGGAGATTacttcgcctttgtcaatttta--------------attttgcattttgagtcagtcatttaatttgaggtgtcaaacattatcttaaggcccttgaaaggcccct-ggtccccagtaccgttacctgtaACAGCATTGCCTGA-ATTCTCCACACACATTCAATCCAGCACCTTCATGCATCGGGGAGACCCACAGAGGCACTCACTTTA----TCTCTCTATTTTTTAAtgtgtg--tgtgtgtgtgcatgcgtgtgcgtgtgtA----------------------------------------------------------TAGACCA-AAATGATGAC i macFas5.chr2 I 16 C 0 s papAnu2.chr2 101063992 899 + 187378091 aaataaataaataaataa---ataaataaatcagtccTGAGGGACACACGAGAAATCTTTGTTGTACTAGTC---------TGACCCCACTAAATGCCAGCAGTAACCACTG-TTCATT-ATGACACAAGAA--AAAGCCATGCAA--ATCTCCAAAATATCTCTGGGA-GCAGT-ATCATCCTGCAGAGAAccattaatttttatgaagacACAATCACACTTCTATAGTTT-ACAATCTGAGTTATACCtgatttacataaaaatac--agtC-ACATAAATGTGATCAGAGTTGTTTTAAGGCCTTTATG---AGGCTCAGGCCCTTTTACTTCTGGAAGCCCTA-CCCCAA-TATATCAAGTATATTAAAATGCACCTTCATcctacaataaatataataatagccAGGCTTgttatgtgccagacaccattTTAAGTACTTTACAATAACTCTTTgaagtaggcactattattattcccattttacagataaggaaacaggcacagagaggttcaaTGACTTGGCCAGAACCACAGAG--------TGGCAGagcc-aaaataaaaagcttagaCATTCTGACACCAACATACTATGGCCTATATAACTCTTGTAGAGTTCATATTTAAGGAGAAAGTATCATTTTT-GAGTTTGTTGCACTGGAGATTACTTCGCCTTtgtcaatttta--------------attttgcattttgagACAGTCATTTAATCTGAGGTGTCAAACATTATCTTAAGGCCCTTGAAAGGCCCCT-GGCCCCCAGTACCATTACCTGTAACAGCATTGCCTGAGATTCTCCACACACATTCAATCCAGCACCTTCATGCATCGGGGAGACCCACAGAGGCACTCATTTTA----TCtctctattttttaatgtgtg--tgtgtgtgtgcatgcgtgtgtgtgtgta--------------------------------------------------------tgtagaccA-AAATGATGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4928632 896 + 91754291 aaataaataaataaataa---ataaataaatCAGTCCTGAGGGACACACGAGAAATCTTTGTTGTACTAGTC---------TGA-cccactaaatgccagcagtaaccactg-ttcatt-atgacaaaagaa--aaagtcatgcaa--atctccaaaatatctctggga-gcagt-atcatcctgcagagaactattAATTTTTATGAAGACACAATCACACTTCTATAGTTT-ACAATCTGAGTTATACCTGATTTACATAAAAATAC--AGTC-ACATAAACGTGATcagaggtgttttaaggcctttatg---aggctcaggcccttttacttctggaagcccta-ccctaa-tatatcaagtatattaaaatgcaccttcat-ctacaataaatataatAATAGCCAGgcttgttacgtgccagacaccattttaagtactttacaataactctttgaagtaggcactattattattcccattttacagataaggaaacaggcacagagaggttcaatgacttgcccagaaccacagag--------tggcggagcc-aaaatataaagcttagacactctgacaccaATATACTATGGCCTATATAACTCTTGTAGAGTTTATATTTAAGGAGAAAGTAACATTTTT-GAGTTTGTTGCACTGGAGATTacttcgcctttgtcaatttta--------------attttgcattttgaatcagtcatttaatttgaggtgtcaaacattatcttaaggcccttgaaaggcccct-ggcccccggtaccgttacctgtaACAGCATTGCCTGA-ATTCTCCACACACATTCAATCCAGCACTTTCATGCATCGGGGAGACCCACAGAGGCACTCACTTTA----TCTCTCTATTTTTTAAtgtgtg--tgtgtgtgtgtatgcatgtgtgtgtgtg--------------------------------------------------------tgtAGACCA-AAATGATGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92407973 966 - 98464013 aaaaaataaaataaataa---at--ataaa--aTTCCTGAGGGACCCAGAAGAAATCTTTGCTGTACTAGTCTACATGTGTTGA-cccactgaatgccagcaggaacccctg-ttcatt-atgac-----aa--aaagccaggcaa--atctccaaaacacctct-gga-gcagg-atcgtcctgcagagaaccattCGTTTTTATGAAGACACAGCCACACTTCTGTAGTTT-ACAATCTGAGTTATACCTGATTCACACAAAAATATAGAGTC-ACATAAAAGTGATcagagttgttttaaggcctcaatg---aggctcaggcccttttgcttctggaggcccca-ccccaattatatcaagcatattaaaatgcaccttcatcctacaatagatacaatAATAGCCAGgcttgttatgggccaggcaccattctaagtgccttacaataactctttgaagcaggcactattattattcccattttacagatacagaaacaggcaca-agaggttcggtgacttaaccagaaccacacgg--------tggtgaagcc-aaaatAGAAAGCTTCGATATTCTGACACGAACATATGATGGCCTATATAACTCTTGTAGAGTTTATACTTAAGGATAAAGTATAATTTATGGAGCTCGTTGCCTTGGAGATGACTTGGCCtttgtcaattttaattgcagagttttta-tttgtattttgagtccatcatttaatttgaggtgtcaaacattatcttaaggcccttgaaaggcccc--ggcccccagtaccgtTACCCGTAACAGCATCGCCTCAGCTTCTCCACATGCATTCAATCCAGCACCTCCACACATCGGGGACACCCACGGAGGCactcactttt--------tctattttttaatgtgtatgtgtgtgtgtgtgcgcgtgtgtgtgtgtgcgtgcgtgtgtgtgtgcatgcgtgtgcatgcgtccgtgtgtgtgtgcgtgtgtgtgcgtgtACCA-AAATAATGAC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24783031 855 - 42124431 ttataaacaggtttttcacttacatttgaa--agtcctaagggacacaggagaaatcttggtcatgctaatc---------aggccccactaaatgc---cagtaacccctatttcatt-atttcataatgaccaaaaccaaataaacattttcaaaatacccctggga-gcagt-attgtcctgccgagaaccactAATTTTTATTAAGATAAAATCACACATCTGTGGTTT-ACAACCTATGTTACACATGATTTATATAAATACAT--AATC-ACATAAACATGATcagggctgttttaagagctttaag---aggctctggcccct---agtttggaggccctt-gcttacttatatcaagcatattaaaatgtacactcatcctacaGCTAATGC--TAATAGCCAGAcctgctatgtgccaggtatcattctgagtatcttccaaaagccctctaaagtaggcattattattatttctgttttacagatgacga-------acagagaggttcagctacttgcccagaactacacagctagtcaatggtggagccaaaaatacaaagctaggc-actccaatgccaACATATTATGGTCTAT-------------AGTTTATATTTAAGAAT-AATTATCACTTAT-GAGTTAGTTTAGTTGCAGAGGATCTaatgtttgtcaatttcaaatgtggaattt--gttttgtattttgagccaatccattaactggaagtctcaaacattattataaggcccttgaaaggcccCA-GATGCCCAGTGTCA-AGCCT------GCACTGTCTAA-AGCCTACA------------ACAGCAC------------------CCCTCTTGGACACTCACTTTC----TCTCTCC---------TGTGTG--TGTGTGTGCGTGTGCTTGTGCATGCATG----------------------------------------------------CAAGCGCACACTGTAAACAATGAC i canFam3.chr34 C 0 I 291 a score=470054.000000 s hg38.chr3_KI270781v1_alt 50542 160 + 113034 GATGGCcagc-ttttagagcaccgtgattcatgcaaacattatctctaattttagcgcccactctgtaagatgt--------------------------------------tgtt-atctt-aatttttatgtgaggtacccggtgtcagatgactgagtgaattttccagtgtttcatgcctagggaaagggggag---ttg s panTro4.chr3 13799831 160 - 202329955 AACGGCcagc-ttttagagcaccgtgattcatgcaaacattatctctaattttagcgcccactctgtaagatgt--------------------------------------tgtt-atctt-aatttttatgtgaggtacccagtgtcagatgactgagtgaattttcctgtgtttcatgcctagggaatgggggag---ttg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13782325 166 - 202140232 AATGGCCAGCTTTTTAGAGCACCATGATTCAtgcaaacattatccctaattttagcacccactctgtaagatgt--------------------------------------tgttcatcttaaatttttatgtgaggtacccagtgtcagatgactgagtgaattttccagtgtttcatgcctagggaatgggggggagttgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14334168 160 - 123690457 AACGGCcagc-ttttagagcaccatgattcatgcaaacattatctctaattttagcaccgactctgtaagatgt--------------------------------------tgtt-atctt-aatttttatgtgaggtagctggtttcagatgactgagtgaattttccagtgtttcatgcctagggaatggcggag---ttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103627748 198 + 192599291 AATGGCCAGC-TTTTAGAGCACCATGATTCATGCAAACATTATCTCTAATTTTAGCACCCATTCCGTAAGATGTcaaacattatctctaattttagcacccactccgtaagatgtt-atctt-aatttttatgtgaggtaactggtgtcagatgactgagagaattttccagtgtttcatgcctagggaatgggggag---ttg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103271219 160 - 192460366 AATGGCcagc-ttttagagcaccatgattcatgcaaacattatctctaattttagcacccactccgtaagatgt--------------------------------------tgtt-atctt-aatttttatgtgaggtaactggtgtcagatgactgagagaattttccagtgtttcatgcctagggaatgggagag---ttg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101064891 160 + 187378091 AATGGCCAGC-TTTTAGAGCACCATGATTCATGCAAACATTATCTCTAATTTTAGCACCCACTCCGTAAGATGt--------------------------------------tgtt-atctt-aatttttatgtgaGGTAACTGGTGTCAGATGACTGAGAGAATTTTCCAGTGTTTCATGCCTAGGGAATGGGGGAG---TTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4929528 160 + 91754291 AACGGCcagc-ttttagagcaccatgattcatgcaaacattatctctaattttagcacccactctgtaagatgt--------------------------------------tgtt-atctt-aatttttatgtgaggtaactggtgtcagatgactgagagaattttccagtgtttcatgcctagggaatgggggag---ttg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92408939 160 - 98464013 AATGACcagc-ttttagagcactatgattcatgcaaacattacctctaattttagcacccactctgtcagatgt--------------------------------------tgtt-atctt-aatttttatataaggtaaccggtgtcagatgactgagtgaattttccaatgtttcacgcctaggaaatggtgggg---TTG i calJac3.chr15 C 0 I 113 e canFam3.chr34 24783886 291 - 42124431 I a score=766811.000000 s hg38.chr3_KI270781v1_alt 50702 321 + 113034 aaaatccagtcctggtctttat-gtctccaaa-gcttctgcccCCATCCTGCTATTAGTGGCTCCGTGTGGGCCCTTTGGGGCTTCTGTGTCTCTTGCATGACACTCCCTTCCCAGTGAAGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCCGGCAGGAGACGGCAGGTACTGGTTTTTCCCCTTCAGCTGCTGTTATCCTATTCCAGAGCCAGATTAAGATCTCAGACTTTCATTATAGCACAGACAACTTCGGGGAGCTGC-TCTCGATGGGAACT-CCAGAGGAAACAGGACGATTTTCTCAGTGCCT s panTro4.chr3 13799991 321 - 202329955 aaaatccagtcctggtctttat-gtctccaaa-gcttctgACCCCATCCTGCTATTAGTGGCTCAGTGTGGGCCCTTTGGGGCTTCTGTGTCTCTTGCATGACACTCCCTTCCCAGTGAAGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCCGGCAGGAGACGGCAGGTACTGGTTTTTCCCCTTCAGCTGCTGTTATCCTATTCTAGAGCCAGATTAACATCTCAGACTTTCATTATAGCACAGACAACTTCGGGGAGCTGC-TCTGGATGGGAACT-CCAGAGGAAACAGGACGATTTTCTCAGTGCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13782491 322 - 202140232 aaaatccagtcctggtctttatgggctccaaagGCTTCTGCCCCCATCCTGCTATTAGTGGCTCAGTGTTGGTCCGTTGGGGCTTCTGTGTCTCTTGCATGACACTCCCTTCCCAGTGATGGAACCTCAGCAGGTTGCCACTTGTCCTGCCATCCAGCTCCTATCCGGCAGGAGACGGCAGGTACTGGTTTTTCCCCTTCAGCTGCTGTTATCCGATTCTAGAGCCAGATTAAGACCTCACAGTTTCATTACAGCACAG---ACTTCAGGGAGTTGCATCTGGATGGGAACTGCCAGAGGAAACAGGACGATTTTCTCAGTGTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14334328 321 - 123690457 aaaatccagtcctggtctttat-ggctccaaa-gcttctgcctccctcctgcTATTAGTGGCTCAGTGTGGGCCCGCTGGGGCTTCTGTGTCTCTTGCATGACACTCCCTTCCCAGTGATGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCCAGCAGGAGATGGCAGGTACTGGTTTTTCCCCTTCAGCTGCTGTTATCCTATTCTAGAGCCAGATTAAGACCTCAGACTTTCATTATAGCACAGACAACTTCAGGAAGCTGC-TCTGGATGGGAACT-CCAGAGGAAACAGGACGATTTTCTCAGTGCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103627946 321 + 192599291 aaaatccagtcctggtctttat-ggctccaaa-gcttctgcccCCATCCTGCTATTAGTGGCTCAGTGTGGGCCCGTTGGGGCTTCTGTGTCTCTTGCCTAACGTTCCCTTCCCAGAGATGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCTGGCAGAAGACGGCAGGTACTGGTTTTTCCCCTTCAGTTGCTGTTATTCCATTCTAGAACCAGATTAAGCTCTCAGACTCTGATTATAGCACAGACAACTTCAGGGAGATGC-ACTGGATGGGAACT-CCAGAGGAAACAGGACAATTTTCTCAGTGCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103271379 321 - 192460366 aaaatccagtcctggtctttat-ggctccaaa-gcttctgcccCCATCCTGCTATTAGTGGCTCAGTGTGGGCCCGTTGGGGCTTCTGTGTCTCTTGCATAACGTTCCCTTCCCAGAGATGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCTGGCAGAAGACGGCAGGTACTGGTTTTTCCCCTTCAGTTGCTGTTATTCCATTCTAGAACCAGATTAAGCTCTCAGACTCTGATTATAGCACAGACAACTTCAGGGAGATGC-TCTGGATGGGAACT-CCAGAGGAAACAGGACAATTTTCTCAGTGCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101065051 321 + 187378091 AAAATCCAGTCCTGGTCTTTAT-GGCTCCAAA-GCTTCTGCCCCCATCCTGCTATTAGTGGCTCAGTGTGGGCCCGTTGGGGCTTCTGTGTCTCTTGCATAACGTTCCCTTCCCAGAGATGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCTGGCAGAAGACGGCAGGTACTGGTTTTTCCCCTTCAGTTGCTGTTATTCCATTCTAGAACCAGATTAAGCTCTCAGACTCTGATTATAGCACAGACAACTTCAGGGAGATGC-TCTGGATGGGAACT-CCAGAGGAAACAGGACGATTTTCTCAGTGCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4929688 321 + 91754291 aaaatccagtcctggtctttat-ggctccaaa-gcttctgcccCCATCCTGCTATTAGTGGCTCAGTGTGGGCCCGTTGGGGCTTCTGTGTCTCTTGCATAACATTCCCTTCCCAGAGATGGAACCTCAGCAGGTTTCCACTTGTCCTGCCATCCAGCTCCTATCTGGCGGAAGACGGCAGGTACTGGTTTTTCCCCTTCAGTTGCTGTTATTCCGTTCTAGAACCAGATTAAGCTCTCAGACTCTGATTATAGCACAGACAACTTCAGGGAGATGC-TCTGGATGGGAACT-CCAGAGGAAACAGGATGATTTTCTCAGTGCCT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24783886 291 - 42124431 I e calJac3.chr15 92409099 113 - 98464013 I a score=1071604.000000 s hg38.chr3_KI270781v1_alt 51023 363 + 113034 GGTCTTACCAGCTGCTATGGTAGTAACAtcccctgcaaaactcatgttgaaacttaatccccaatgtggcagcatcgagaggtggggctc-ttaagaggtgattagatcatgaggactctgccctcatgggtggattaatctattcatagcttaatgggttatcatgggagtggg-actggtggctttataagaagaggaagtgagatctgagctggcatgctcagccccctcac-tatgagatgccctgtgccaccttgggactctatggagagtcaccaccagcaagaaggccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgtaagaaataaatttcttttctttat s panTro4.chr3 13800312 363 - 202329955 GGTCTTACCAGCtgctatggtagtaacgtcccctgcaaaactcatgttgaaacttaatccccaatgtggcagcatcgagaggtggggctc-ttaagcggtgattagatcatgaggactctgccctcataggtggattaatctattcatagcttaatgtgttatcatgggagtggg-actggtggctttataagaagaggaagtgagatctgagctggcacgctcagccccctcac-tatgagatgccctgtgccaccttgggactctatggagagtcaccaccagcaagaaggccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgtaagaaataaatttcttttctttat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13782813 365 - 202140232 GGTCTTACCAGCtgctatggtagtaacgtcccctgcaaaactcatgttgaaacttaatccctaatgtggcagcatcgagaggtggggccctttaagaggtgattagatcatgaggactctgccctcatggatggattaatctattcatagcttaatgggttatcatgggaatgggaactggtggctttataagaagaggaagtgagatctgagctggcatgctcagccccctcac-tatgagatgccctgcgccaccttgggactctatggagagtaaccaccagcaagaaagccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgcaagaaataaatttcttttgtttat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14334649 363 - 123690457 GGTCTTACCAGCtgctatggtagtaacgtcccctgcaaaactcacgttgaaacttaatccccagtgtggcagcatcgagaggtggggccc-ttaagaggtgattagatcataaggactctgccctcatggatggattaatctattcatagcttaatgggctatcatgggagtggg-actggtggctttataagaagaggaagagagatctgagctggcatgctcagctccctcac-tatgagatgccctgcaccaccttgggactctatggagagtcaccaccagcaagaaggccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgcaagaaataaatttcttttctttat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103628267 355 + 192599291 GGTCTTACCAGCtgctatggtagcaacgtcccctgcaaaactcatgttgaaacttaatccccaatgtggcagcatcgagaggtgggaccc-ttaagaggtgattagatcatgaggactctgccctcatggatggattaatctactcatagcttaatgggttatcatgggagtgga-actggtggcttta-aagaaaaggaagtgaggtctgagctggcgtgctcagccgcctcac-tatgagatg-------ccaccttgggactttatggagagtcaccaccagcaagaaggccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgcaagaaataaatttcttttctttgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103271700 355 - 192460366 GGTCTTACCAGCtgctatggtagcaacgtcccctgcaaaactcatgttgaaacttaatccccaatgtggcagcatcgagaggtgggaccc-ttaagaggtgattagatcatgaggactctgccctcatggatggattaatctactcatagcttaatgggttatcacgggagtgga-actggtggcttta-aagaaaaggaagtgaggtctgagctggcgtgctcagccgcctcac-tatgagatg-------ccaccttgggactttatggagagtcaccaccagcaagaaggccctcaccagatgtggcccttcagtcttgaacttagcctccagaactgcaagaaataaatttcttttctttgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101065372 355 + 187378091 GGTCTTACCAGCTGCTATGGTAGCAACGACCCCtgcaaaactcatgttgaaacttaatccccaacgTGGCAGCATCGAGAGGTGGGACcc-ttaagaggtgattagatcatgaggactctgccctcatggatgGATTAATCTACTCATAGCTTAATGGGTTATCGTGGGAGTGGA-ACTGGTggcttta-aagaaaaggaagtgaggTCTGAGCTGGCGTGCTCAGCCGCCTCAC-TATAAAATG-------CCACATTGGGACTTTATGGAGAGTcaccaccagcaagaaggccctcaccagatgtggcccttCAGTCTTGaacttagcctccagaactgcaagaaataaatttcttttctttat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4930009 351 + 91754291 GGTCTTACCAGCTGCTATGGTAGCAACgtcccctgcaaaactcatgttgaaacttaatccccaatgtggcagcatcgagaggtgggacct-ttgagaggtgattagatcatgaggactctgccctcatggatggattaatctactcatagcttaatgggttatcatgggagtgga-actggtggctttatgggaaaaggaagtgagatctgagctggcgtgctcagccgcctcac-tatgagatg-------ccaccttgggactctgtggagagtcaccagcagcaagaaggccctcgcca-----gggccttcagtcttgaacttagcctccagaactgcaagaaataagtttcttttctttat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92409212 363 - 98464013 GGTCTTACCAGCAGCTACGGTAGTAACgtccccagcaaaactcatgtgaaaacttaatccccaatgtggcagcattgagaggtggagccc-ttacaaggtgaatagatcatgaggactctggccttgtgaatggattaatccattcatggcttgatggattatcgtgggag-ggg-actcgtggctttgtgagaagaggaagtgagatgggagctggcatgctcagcaccctcacttatgagatgccctgcaccgccctgggactctgtggagggtcaccaccagcaagaagaccctcaccagatgtggcccttcagttttgaacttggcctccagaactgcaagaaataaatttattttctttat i calJac3.chr15 I 113 I 930 e canFam3.chr34 24783886 291 - 42124431 I a score=756959.000000 s hg38.chr3_KI270781v1_alt 51386 260 + 113034 aaatttcctgtttcaggtgttttgctataaccaa-caggaaacagatgaaca-caC-GAGCTCTGCTTTTCCTGGGTGATTTTCCTTTTTGAATTATGCACTTAAAATGGATGCATCTTATTGATGTAATTGATATGT-CTACAAAAAGCTACGACAAAATAAAAGTTAATTTAATA-AGACAGTAAAAGGGATTCTAAGCTGG-TGAACCCAGTGGGGCCTGGGCAGAGATTCTT-ACTCTGCAAACTGCCCGAAGTGGATCAAAA s panTro4.chr3 13800675 260 - 202329955 aaattacctgtttcaggtgtttggctataaccag-caggaaacagatgaaca-caC-GAGCTCTGCTTTTCCTGGGTGATTTTCCTTTTTGAATTATGCACTTAAAATGGATTCATCTTATTGATGTAATCGATATGT-CTACAAAAAACTATGACAAAATAAAAGTTAATTTAACA-AGACAGTAAAAGGGATTCTAAGCTGG-TGAACCCAGTGGGGCCTGGGCAGAGATTCTT-ACTCTGCAAACTGCCTGAAGTGGATCAAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13783178 267 - 202140232 aaattacctgtttcaggtgttctgttataaccaaccaggaaacagatgaacacCACGGAGCTCTGCTCTTCCTGGGTGATTTTCCTTTCTGAATTATGCACTTAAAATGGATGCATCTTATTGATGTAATCGATATGTCCTACAAAAAGTTATGACAAAATAAAAGTTAATTTAACATAGACAGTAAAAGGGATTCTAAGCTGGTTGAACCCAGTGGGGCCTGGGCACAGATTCTTAACTCTGCAAACTGCCTGAAGTGGATCAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335012 260 - 123690457 aaattacctgttccaggtgttttgttataaccaa-caggaaacagacaaaca-caC-GAGCTCTGCTTTTCCTGGGTGATTTTCCTTTTTGAATTATGCACTTAAAATGGACGCATCTTACAGATGTAATCGATATGT-CTGCAAAAAGTTATGACAAAACAAAAGTTAATTTAACA-AGACAGTAAAAGGGATTCTAAGCTGG-TGAATCCAGTGGGGCCTGGGCAGAGATTCTT-ACTCTGCAAACCGCCTGAAGTGGATCAGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103628622 260 + 192599291 aaattacctctttcaggtgttttgttacaagcaa-caggaaacagatgaaca-caC-GCGCTCTGCTTTTCCTGGGTGATTTTCCTTTTTGAATTATGCACTTAAAATGGCTGCATCTTATTGATGTAATTGATACGT-CTATAAAAAGGTATGACAAAATAAAAGTTAATTTAACA-AGACAATAAAATGGATTCTAAGCTGG-TGAACCCAGTGGGGCCTGGGCAGAGATTCTC-ACTCTGCAAACTGCCTAAAGTGGATCGAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103272055 260 - 192460366 aaattacctctttcaggtgttttgttacaagcaa-caggaaacagatgaaca-caC-GAGCTCTGCTTTTCCTGGGTGATTTTCCTTTTTGAATTATGCACTTAAAATGGCTGCATCTTATTGATGTAATTGATACGT-CTATAAAAAGTTATGACAAAATAAAAGTTAATTTAACA-AGACAATAAAATGGATTCTAAGCTGG-TGAACCCAGTGGGGCCTGGGCGGAGATTCTC-ACTCTGCAAACTGCCTAAAGTGGATCGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101065727 260 + 187378091 aaattacctctTTCAGGTGTTTTGTTACAAGCAA-CAGGAAACAGACGAACA-CAC-GAGCTCTGCTTTTCCTGGgtgattttcctttttgaattatGCACTTAAAATGGCTCCATCTTATTGATGTAATTGATACGT-CTATAAAAAGTTATGACAAAATAACAGTTAATTTAACA-AGACAATAAAATGGATTCTAAGCTGG-TGAACCCAGTGGGGCCCGGGCAGAGATTCTT-ACTCTGCAAACTGCCTAAAGTGGATCGAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4930360 260 + 91754291 aaattacctctttcaggtgttttgttacaagcaa-caggaaacagacgaaca-caC-GAGCTCTGCTTTTCCTGGGTGATTTTCCTTTtcgaattatgcacttaaaatggctgcatcttattgatgtaattgatacat-ctataaaAAGTTATGACAAAATAAAAGTTAATTTAACA-AGACAATAAAATGGATTCTAAGCTGG-TGAACCCAGTGGGGCCTGGGCAGAGATTCTC-ACTCTGCAAACTGCCTAAAGTGGATCGAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92410505 259 - 98464013 aaattacctgtttcaggtgttttgttacaagcaa-caggaaacagacgaaca-caC-CGGCTCTGC-CTTCCTGGGTGATCTTCCTTTCTGAATTACGCACTTGAAACAGACGCATCTTATTGATGTAATTGATATGT-CTGTAAAAAGTTATGACAAAATGAAAGTTAATTTAACA-AGACAATAAAATGAATTCTAAGCTGG-TGAACACAGCGGGGCTTTGGCAGAGATTCTC-ACTCTGCAAACTGCCTAAAGTGGATCAGAA i calJac3.chr15 I 930 C 0 e canFam3.chr34 24783886 291 - 42124431 I a score=1494417.000000 s hg38.chr3_KI270781v1_alt 51646 445 + 113034 ACTAAAACCACTCATCGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGATTGCCTGGTCCCCAATATGAGGATGCAAAATGCATGGGGTGTGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGCCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTATTGGGCCTGAGGCAAAGTAGAGAAAGCTAAGAGAAAGGAAAGGGTAGCGACCCAGGCAGACAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGAGACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAACTTGGTGCCTGCCTT-CCAGTTCCCTAATCCTCCCGAGGG-CCCGTCTCTTCCTATCCTTAGGTTCCATGCAATCTGCC s panTro4.chr3 13800935 445 - 202329955 ACTAAAACCACTCATCGCTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGCGGGCCATGACTGGACAAGGTCACCTCTCAAACTGATTGCCTGGTCCCCAATATGAGGATGCAAAAGGCATGGGGTGTGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGCCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTATTGGGCCTGAGGCAAAGTAGAGAAAGCTAAGAGAAAGGAAAGGGTAGTGACCCAGGCAGAGAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGAGACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAACTTGGTGCCTGCCTT-CCAGCTCCCTAATCCTCCCGAGGG-CCCGTCTCTTCCTATCCTTAGGTTCCATGCAATCTGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13783445 446 - 202140232 ACTAAAACCACACATTGTTTCTCCTGACCCATGCCATCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGATTGCCTGGTCCCCAATATGAGGATGCAAAAGGCCTGGGTTTTGG-------ATGTTACCAACTGGTT-CCCTCTCATAAGACTGAGATAAACTCCAT-GGGCCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTACTGGGCCTGAGGCAAAGTAGAGAAAGCTAAGAGAAAGGAAAGGGTAGCGACCCAGGCAGAGAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGACACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAACTTGGTGCCTGCCTT-CCAGTTCCCTAATCCTCCCGAGGT-CCCATCTCTTCCTATTCTTAGGTTCCATGCAATCTGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335272 442 - 123690457 ACTAAAACCACTCATCGTTTCTCCTGA-TCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGATTGCCTGGTCCCCAATATGAGGATGCAAAAGGCATGGGGTGTGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCGT-GGGCCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTGTTGGGCCTGAGGCAAAGTAGAGAAAGCTAAGAAAAAGGAAAGGGTAGCGACCCAGGCAGAGAGAAG---ACTGGAGAGATCTGGCAGAGCCAGGGAAACAGAGGATGCATAGGCACCACAGTGAGAGAAAGGAACTTGGTGCCTGCCTT-CCAATTCCCTAATCCTCCCAAGGT-CCCGTCTCTTCCTATCCTTAGATTCCATGCAATCTGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103628882 445 + 192599291 ACTAAAACCACTCATCGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGGTTGCCTGGTTCCCAATATGAGGATGCAAAAGGCATGGGGCATGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGTCCTTCACCTGTAGATCTCAGAGTATGAGG----------CAGA---------TTTTATTGGATCTGAGGCAAAGTAGAGAAAGTTAAGAGAAAGGAAAGGGTAGTGACCCAGGCAGAGAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGAGACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAATTTGGTGCCTGCCTT-CCAGTTCCCTAATCCTCCCGAGGT-CCCGTCTCTTCCTATCCTTAGGTTCCATGCAATCTGCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103272315 445 - 192460366 ACTAAAACCACTCATCGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCACGACTGGACAAGGTCACCTCTCAAACTGGTTGCCTGGTTCCCAATATGAGGATGCAAAAGGCATGGGGCATGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGTCCTTCACCTGTAGATCTCAGAGTATGAGG----------CAGA---------TTTTATTGGATCTGAGGCAAAGTAGAGAAAGCTAAGAGAAAGGAAAGGGTAGTGACCCAGGCAGAGAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGAGACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAATTTGGTGCCTGCCTT-CCAGTTCCCTAATCCTCCCGAGGT-CCCGTCTCTTCCTATCCTTAGGTTCCATGCAATCTGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101065987 445 + 187378091 ACTAAAACCACTCATTGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGATTGCCTGGTTCCCAATATGAGGATGCAAAAGGCATGGGGCATGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGCCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTATTGGATCTGAGGCAAAGCAGAGAAAgctaagagaaaggaaagggtagcgacccaggcagagagaagagtaCTGGAGAGATCTGGCagagccagggagacagaggatGCATAGGCACCACAATGAAAGAAAGGAATTTGGTGCCTACCTT-CCAGTTCCCTAATCCTCCCGAGGT-CCCGTCTCTTCCTATTCTTAGGTTCCATGCAATCTGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4930620 445 + 91754291 ACTAAAACCACTCATCGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCAAACTGGTTGCCTGGTTCCCAATATGAGGATGCAAAAGGCATGGGGCATGG-------ATGTTACCAACTGGTT-CCCTCTCATGAGACTGAGATAAACTCCAT-GGGTCCTTCACCTGTAGATCTCAGAGAATGAGG----------CAGA---------TTTTATTGGATCTGAGGCAAAGTAGAAAAAGTTAAGAGAAAGGAAAGGGTAGCGACCCAGGCAGAGAGAAGAGTACTGGAGAGATCTGGCAGAGCCAGGGAGACAGAGGATGCATAGGCACCACAATGAGAGAAAGGAATTTGGTGCCTGCCTT-CCAGTTCCCTAATCCTCCCGAGGT-CCCGTCTCTTCCTATCCTTAGGTTCCATGCAATCTGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92410764 434 - 98464013 ACTAAAACCACTCCTTGTTTCTCCTGA-CCATGCCCTCTTCTTAGAGATTCCTTCTCC-CACAACCCTGGGGGCCATGACTGGACAAGGTCACCTCTCATG--------CTGGTCCCTAATATGAGGATGCAAAAGGTATGGGTTGTGC-------ATGTTACCAACTGGTT-CTCTCTCACAAGACAGAGATAAACTCCATGGGGCCCTTCACCTATAGATCTCAGAGAGTGAGGCAGAAGCAGCCAGA---------TTTTATTGGGCCTGAGGCAAAAT-----------AGAGAAAGGAAAGAATAGAGACCCAGGCAGAGGGAA---TACTGGAGTGACCTGGCAGAGCCAGAGAGACA-AGTATGCACAGGGGCCACAACGAGAGAAAGGAACTTGCTGCCTGCCCTGCCAGTTCCCTAATCCTCCCAAGGC-CCCCTTTTTTCCTATGCTTAGGTTCCATGGAGTCTGCC i calJac3.chr15 C 0 C 0 s canFam3.chr34 24784177 428 - 42124431 ACTAAAATCACCCATCACTTCTCCTGA-TCACACCGTCTTCTCAGAGATCCCGTCCCCTTACAACCCCAGAGTCCATGACTATACCAAGTTTCCCCTCATCTCGGCTGCCTGGATCCTA----GAAGACCCAAA--GCTTGAGGTGGGGCGGGCATATGTCACCAGCTAGTTCCCCTCTCTTGAGACC--GACAGACTCCAT-GGGCCCTTTCCCCAGAGGTCTCAGAGAATGAGG----------CTGAAATAGCCACATTTACTGGGCATGTGG-----TAGAGAAAGCTCAG-GAAGGAAGGGAGTAGAGACACCGGCAGAGAGAAGCAAATAGGAGAGAACTTGCGAGGCCAGAGAGAGGGAGCAGGCATGTGAACAAAAATGAAAGAAAG-----------------T-C-----CCCAAACCTTCCTGAGGTGTTCCACCCTTCCTATCTTTAGGCTCCGTGAGATCTGGC i canFam3.chr34 I 291 C 0 a score=246910.000000 s hg38.chr3_KI270781v1_alt 52091 75 + 113034 AGTATCCTTATATGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAG s panTro4.chr3 13801380 75 - 202329955 AGTATCCTTATATGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAACTCTAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13783891 75 - 202140232 AGTATCTTTATATGATAATTCCTTTCCTGTAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335714 75 - 123690457 AGTATCCTTATATGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGTATCCCCTGCTGAGCCCACTGCAGCTCTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103629327 75 + 192599291 AGTATCCTTATACGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAG i rheMac3.chr2 C 0 I 34 s macFas5.chr2 103272760 75 - 192460366 AGTATCCTTATACGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAG i macFas5.chr2 C 0 I 3 s papAnu2.chr2 101066432 75 + 187378091 AGTATCCTTATACGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4931065 75 + 91754291 AGTATCCTTATACGATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTGTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92411198 75 - 98464013 AGTATCCTTATACAATAATTCCTTTCCTGCAGCCAAAGCTCCCTGCATCCCCTGCTGAGCCCACTGCAGCTCTAT i calJac3.chr15 C 0 C 0 e canFam3.chr34 24784605 0 - 42124431 C a score=51063.000000 s hg38.chr3_KI270781v1_alt 52166 31 + 113034 ATCCCAAAAGGACCAGCCCA--CAAGTGACAGC s panTro4.chr3 13801455 31 - 202329955 ATCCCAAAAGGACCAGCCCA--CAAGTGACAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13783966 31 - 202140232 ATCCCAAAAGGACCAGCCCA--CGAGTGACAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335789 31 - 123690457 ATCCCAAAAGGACCAGCCCA--CGAGTGATAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103272838 23 - 192460366 ACTCCA----GTCTAGCCCACTCCAGT------ i macFas5.chr2 I 3 I 8 s papAnu2.chr2 101066507 31 + 187378091 GTACCAAAAGGACCAGCCCA--CCAGTGACAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4931140 31 + 91754291 GTACCAAAAAGACCAGCCCA--CCAGTGACAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92411273 31 - 98464013 GTCCCAAAAGGACCAGCCCA--TCAGTGACAGC i calJac3.chr15 C 0 C 0 e rheMac3.chr2 103629402 34 + 192599291 I e canFam3.chr34 24784605 0 - 42124431 C a score=530102.000000 s hg38.chr3_KI270781v1_alt 52197 177 + 113034 CTGCAGTCTCCCGACCTGGTGGGCCTTGGCTCTGAAGGGAACTGCCCCAGGGCCTGCCACCTGGTCACCCACAAGTCACAATCACCTACCCCCAGGGCCTT-ACCTGGGTGTGAGCTCTGCTTCATGGCCCCTGCAGTTGGCCCCAAGACTCTGCCTAGTGTCTTTACAGGACTAGCT s panTro4.chr3 13801486 177 - 202329955 CTCCAGTCTCCCAACCTGGTGGGCCTTGGCTCTGAAGGGAACTGCCCCAGGGCCTGCCACCTGGTCACCCACAAGTCACGGTCACCTACCCCCAGGGCCTT-ACCTGGGTGTGAGCTCTGCTTCATGGCCCCTGCAGTTGGCCCCAAGACTCTGCCTAGTGTCTTTACAGGACTAGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13783997 177 - 202140232 CTCCAGTCTCCCAAACTGGTGGGTCTTGGCTCTGAAGGGAACTGCCCCAGGGCCTGCCACCTAGTCACCCACAAGTCACAATCACCTACCCCCAGGGCTTT-ACCTGGGTGTGAGCTCTGCTTCATGGCCCCTGCAGTTGGCCCCAAGACTCTGCCTAGTGTCTTTACAGGACCTACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335820 177 - 123690457 CTCCAGTCTCCCAACCTGGTGGGCCTTGGCTCTGAAGAGAACTGCCCCAGGGCCTGCCACCTGGTCACCCACAAGTCACAATCACCTACCCCCAGGGCCTT-ACCTGGGTGTGAGCTCTGCTTCATGGCCCCTGCAGTTGGCCCCAAGACTCTGCCTAGTGTCTTTACAGGACTAGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103629436 176 + 192599291 ctccagtcTCCCAACCTGGTGGGCCTTGGATCTGAAGGGAACTGCCCCAGGGCCTGCCGCCTGGTCACCCATGAGTCACAATCACCTACCCCCAGGGCCCTGACCTGGGTGTGAGCTCTGCTTCTTGGACCCTGCAGTTGGCCCCAAGA--CTGCCTAGTGTCTTTACAGGACTAGCC i rheMac3.chr2 I 34 C 0 s macFas5.chr2 103272869 176 - 192460366 CTCCAGTCTCCCAACCTGGTGGGCCTTGGATCTGAAGGGAACTGCCCCAGGGCCTGCCGCCTGGTCACCCATGAGTCACAATCACCTACCCCCAGGGCCCTGACCTGGGTGTGAGCTCTGCTTCTTGGACCCTGCAGTTGGCCCCAAGA--CTGCCTAGTGTCTTTACAGGACTAGCC i macFas5.chr2 I 8 C 0 s papAnu2.chr2 101066538 176 + 187378091 CTCCAGTCTCCCAACCTGGTGGGCCTTGGATCTGAAGGGAACTGCCCCAGGGCCTGCCGCCTGGTCACCCATGAGTCACAATCACCTACCCCCAGGGCCCTGACCTGGGTGTGAGCTCTGCTTCTTGGACCCTGCAGTTGGCCCCAAGA--CTGCCTAGTGTCTTTACAGGACTAGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4931171 176 + 91754291 CTCCAGTCTCCCAACCTGGTGGGCCTTGGCTCTGAAGGGAACTGCCCCAGGGCCTGCCACCTGGTCACCCATGAGTCACAATCACCTACCCCCAGGGCCCTGACCTGGGTGCGAGCTCTGCTTCTTGAACCCTGCAGTTGGCCCCAAGA--CTGCCTAGTGTCTTTACAGGACTAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92411304 176 - 98464013 CCCCAGTCTCCCAAGCTGGTGGGTCTCGGCTCTAAAGGAAGCTGCCCCAGGACCTGTCGTCTGGTCACCCACGAGTCACAAACACCTACCCCCAGGCCCTT-AACTGGGTGTGGGCTCTGCTTCACGGCCCCTGCAGTTGGCCCCGAGACTCTGCCTAGTGTCTTTACA-GACTAGCC i calJac3.chr15 C 0 C 0 e canFam3.chr34 24784605 0 - 42124431 C a score=473538.000000 s hg38.chr3_KI270781v1_alt 52374 159 + 113034 CCACTGTGGACCATAGCCCG-CTTTGCTCAAGCTAAACCCTGTC--CACTGAGTGGCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATAC----------ACACTCTACCAATTCC-------AGACTCAGCAGTGAAATAGATGGTCCAAGG-----CCTGCCCTG-CCTGCCTGTTGAATAGT s panTro4.chr3 13801663 159 - 202329955 CTACTGTGGGCCGTAGCCCG-CTTTGCTCAAGCTAAACCCTGTC--CACTGAGTTGCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATAC----------ACACTCTACCAATTCC-------AGACTCAGCAGTGAAATAGATGGTCCAAGG-----CCTGCCCTG-CCCGCCTGTTGAGTAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13784174 162 - 202140232 CCCCTGTGGGACGCAGCCTGCCTTTGCTCAAGCTAAACCCTGTCCTCACTGAGTGGCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATAC----------ACACTCTACCAATTCC-------AGACTCAGCAGTGAAATAGATGGTTCAAGG-----CCTGCCCTG-CCCGCCTGTTGAGTAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14335997 159 - 123690457 CCACTGTGGACCGCAGCCCG-CTTTGCTCAAGCTAAACTCTGTC--CACTGAGTGGCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATAC----------ATACTCTACCAATTCC-------AGACTCAGCAGTGAAATCGATGGTTCAAGG-----CCTGCCCTG-CCCGCCTGTTGAGTAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103629612 162 + 192599291 CCACTGTGGACCACAGCCCG-CTTTGCTCAAGCTAAACCCTGCC--CACTGAGTGTCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATGCTCTATCCATGAGGCTCTATCAATTCC-------AGCCTCAGCA--------GATGGCTCAAGG-----CCTGCCCTGCCCCACCAATTGAGTAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103273045 162 - 192460366 CCACTGTGGACCACAGCCCG-CTTTGCTCAAGCTAAACCCTGCC--CACTGAGTGTCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATGCTCTATCCATGAGGCTCTATCAATTCC-------AGCCTCAGCA--------GATGGCTCAAGG-----CCTGCCCTGCCCCACCAATTGAGTAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101066714 162 + 187378091 CCACTGTGGACCACAGCCCG-CTTTGCTCAAGCTAAACCCTGCC--CACTGAGTGTCTGGATCTGCTCCCTGAGGTCCTCTTTTCCATGCTCTATCCATGAGGCTCTATCAATTCC-------AGCCTCAGCA--------GATGGCTCAAGG-----CTTGCCCTGCCCCACCAATTGAGTAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4931347 167 + 91754291 CCACTGTGGACCACAGCCTG-CTTTGCTCAAGCTAAACCCTGCC--CACTGGGTGTCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATGCTCTATCCATGAGGCTCTATCAATTCC-------AGCCTCAGCA--------GATGGCTCAAGGCCTGCCCTGCCCTGCCCCACCAATTGAGTAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92411480 153 - 98464013 CCA-TGTGGACCACAGCCCG-CTTTGCTCAAGCTAAACCCTGCC--CACTGAGTGGCTGGATCTGCTCCCTGAGGTCCTCCTTTCCATGC----------GCCCTCTGCCAATTCC-------AGACTCAGCAGTGAAACAGATGGCGCAAGG-----CCTGCCCCA-CCTG-----TGAGTAGT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24784605 166 - 42124431 CCACGGTGGACCCCAGTCCA-CTTTCCTCTAGGTAAGCCCTGAC--CATTGAATGGCTGTACCTGCTCCCTGAGATCCTCCTTGTCATGC----------TGACTTTGCCAATTCCAGACTGAAGACTCGGCAGTGACACCAACGGCCCAAAG-----CCCGCCTGC-CCCACCCACTGGATGGT i canFam3.chr34 C 0 I 16718 a score=2691350.000000 s hg38.chr3_KI270781v1_alt 52533 922 + 113034 TCAGAAGTTCCTCCGTtgcaaactaaaaataaaattctaggccttctcctccctcccaccattgactgaatagacaccctcttggccaagaggaccccagaaaaaccttaaaaccgagttcctggccatgatggaatgtgaggttggacaagctctattatatcccctcccttttgcagtttagata---caactaaccagcattaatgttaaaatacagatcataagattgacaaaacgggctctttgtagcgataagataccacattataaacagcacctaaggcgatgcccagcaagagtgaagtc-acacactcctacacttaaagaataaattgaggtaggtgtatcactagaggtcaggagttcgagaccagcctggccaccatggtgaaa-ccccatct-ctactgaaaatacaaaaattagccaggcatggtgatgcatgcctgtaatctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcaatgagctgagatagcgccactgcaccccagcatgggcgacagaaggagactctgtctcc-----------------aaaaaaaaaaaaaaTCCAAAAtctcatgacgtctactagtactatcccaatcaaagccactgttatttctcatgtagattattgtaatagccacccgagctacactttctgcttccatccttgcccctccccaatctgttcttcaccca-tcagccagagtcatcccttcaaaacacaagtcaaataaaatcacttctctctgctcgaaatcttctagcagttcctcaaatcactcCATGTAGGATGCTACA------------------------------------ATGAGTGGAGGAAACTACTAGGTCTGCGATCCACTCATCTTGAGTGGAGAAGTACTGAGAATAGATCTGGTGAGTCAGCACTAGCTGCTGAGGAGCCCCGAg s panTro4.chr3 13801822 924 - 202329955 TCAGAAGTTCCTCCGTtgcaaactaaaaataaaattctaggtcttctcctccctcccaccattgactgaatagacaccctcttggccaagaggaccccagaaaaaccttaaaaccgagttcctggccatgatggaatgtgaggttggacacgctctattatatcccctcccttttgcaatttagata---caactaaccagcattaatgttaaaatacagatcataagattgacaaaacgggctctttgtagcgataagataccacattataaacagcacctaaggcaatgcccagcaagagtgaagtc-acacactcctacacttaaagaataaattgaggtaggtgtatcactagaggtcaggagttcgagaccagcctggccaccatggtgaaa-ccccatct-ctactgaaaatacaaaaattagccaggcatggtgatgcatgtctgtaatctcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatagcgccactgcaccccagcatgggcgacagaatgagactctgtctcca---------------aaaaaaaaaaaaaaaTCCAAAAtctcatgacatctactagtactatcccaatcaaagccactgttatttctcatgtagattattgtaatagccaccggagctacaccttctgcttccatccttgcccctccccaatctgttcttcaccca-tcagccagagtgatcccttcaaaacacaagtcaaataaaatcacttctctctgctcgaaatcttctagcagttcctcaaatcactccgtgtaGGATGCTACA------------------------------------ATGAGTGGAGGAAACTACTAGGTCTGCGATCCACTCATCTTGAGTGGAGAAGTACTGAAAATAGATCTGGTGAGTCAGCAGTAGCTGCTGAGGAGCCCcaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13784336 935 - 202140232 TCAGAAGTTCCTCTATtgcaaactaaaaataaaattctaggccccctcctccctcccaccattgactgaatagactccctcttggccaagaggactccagaaaaaccttaaaaccgagttcctggccatgatggaatgtgaggttggacacgctctattatatcccctcccttttgcagtttagata---caactaaccagcattaatgttaaaatatagatcataagattgacaaaac-ggctctttgtagcgataagataccacattataaacagcacctaaggcaatgcccagcaagagtgaagtctacacactcctacacttaaagaataaattgaggtaggtgtatcactagaggtcaggagttcaagaccagcctggccaccatggtgaaa-ccccatctgctactgaaaatacaaaaattagccaggcatggtgatgcatgcctgtaatctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatagcgccactgcaccccagcatgggcgacagaatgagactctgtctcCA----aaaac-aaaacaaaacaaaacaaaaATCCAAAAtctcatcacctctactagtactatcctgatcaaagccactgttgtttctcatgtagattattgtaatagccacccgggctacaccttctgcttccatccttgccccttcccaatctgttcttcaccca-ccagccagagtaatcccttcaaaacacaagtcaaataaaatcacttctctctgctccaaatcttctagcagttcctcaaatcactccgtgtaggatgctaca------------------------------------atgagtgaaggaacctactaggtcTGCGATCCACTCATCTTGAGTGGAGAAGTACTGAGAATAGATCTGGTGAGTCAGCACTAGCTGCTGAGGAGCCCTGAg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14336156 936 - 123690457 TCAGAAGTTCCTCTGTTACaaactaaaaataaaattctaggccccctcctccctcccaccattgactgaatagacaccctcttggtcaagaggatcccagaaaaaccttaaaaccgagttcctggccatgatgtaatgtgaggttggacatgctttattatatcccctcccttttgcagtttagcta---caactaaccagcattaatgttaaaatacagatcataagattgacaaaacaggctctttgtagcgataaaataccacattataaacagcacctaaggcaatgcccagcaagagtgaagtc-acacactcccacacttaaagaataaattgaggtaggtgtatcactagaggtcgggagttcgagaccagcctggccaccatggtgaaacccccatct-ctactgaaaatacaaaaattagccaggcatggtgatgcatgcctgtaatctcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcggtgagctgagatagcgccactgcaccccagcatgggcaacagaatgagactctgtctcca----aaaacaaaaacaaacaaacaaacaaaTCCAAAAtctcatcacctctactaatactatcccgatcaaagccactgttatttctcatgtagattatagtaatagccacccgagctacaccttctgcttccatccttgcccctccccaatctgttcttcaccca-tcagccagagtgatcccttcaaaacacaagtcaaataaaatcagttctctctgctcaaaatcttctagcagtttctcaaatcactccgtgtaggatgctaca------------------------------------atgagtgaaggaacctactaggtcTGCAATCCACTCATCTTGAGTGGAGAAGTACTGAGAATAGATCTGGTGAGTCAGCACTAGCTGCTGAGGAGCCCCGAg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103629774 936 + 192599291 TCAGAAGTTCCTCTATtgcaaactaaaaataaaattctaggccccctcctccctcccaccattgcctgaacagacaccctcttgaccaaggggactccagaaaaaccttaaaaccgagttcctggccatgatggaatgtgaggttggatgcgccttattataccccttcccttttgcagtttagaca---caactgaccagcattaatgttaaaatagagatcataagattgacaaaacaagctctttgtggcgataagatgtcacattataaacaggacctaaggcaatgcccagcaaaggtgaagtc-acatactcctacacttaaagaataaactgaagtgggtggatcacttgaggtcaggagttcgagaccagcctggtcaccatggtgaaactcctgtct-ctattaaaaatacaaaaattagctgtgcatggtgatggatgcctgtaatctcagctactcaggaggctgaggcaggagaatcgcttgaatccggaaggcagaggttgcagtgagccaagatagcgccactgcactccaccctaggagacagagtgagactccgtctcca----aaataaataaataaaataaaataaaaTCCAAAAtctcatcacctctactagtactattctgatcaaagccactgttatttctcatgtagattattgtaatagccacccaaactaaaccttctgcttccatccttgcccctccccaatctgttcttcaccca-tcagtcagagtgatcccttcaaaacacaagtcaaataaaatcacttctctctgttcaaaatcttctagcagttcctcaaatcactccgtgtaggagACTACA------------------------------------ATGAGTGAAGGGACCTAATAGGTCTGCGATCCACTCATCTTGAGTGAAGAAGCACTGAGAATAGCTCTGGTGAGTCAGCACTAGCAGCTGAGGAGCCCTGAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103273207 940 - 192460366 TCAGAAGTTCCTCTATtgcaaactaaaaataaaattctaggccccctcctccctcccatcattgcctgaacagacaccctcttgaccaaggggactccagaaaaaccttaaaacagagttcctggccatgatggaatgtgaggttggatgcgccttattataccccttcccttttgcagtttagaca---caactgaccagcattaatgttaaaatagagatcataagattgacaaaacaagctctttgtggcgataagatgtcacattataaacaggacctaaggcaatgcccagcaaaggtgaagtc-acatactcctacacttaaagaataaactgaagtgggtggatcacttgaggtcaggagttcgagaccagcctggtcaccatggtgaaactcctgtct-ctattaaaaatacaaaaattagctgtgcatggtgatggatgcctgtaatctcagctactcaggaggctgaggcaggagaatcgcttgaatccagaaggcagaggttgcagtgagccaagatagcgccactgcactccaacctaggagacagagtgagactccgtctccaaaataaataaataaataaaataaaaTAAAATCCAAAAtctcatcacctctactagtactattctgatcaaagccactgttatttctcatgtagattattgtaatagccacccaaactaaaccttctgcttccatccttgcccctccccaatctgttcttcaccta-tcagtcagagtgatcccttcaaaacacaagtcaaataaaatcacttctctctgttcaaaatcttctagcagttcctcaaatcactccgtgtaggagACTACA------------------------------------ATGAGTGAAGGGACCTAATAGGTCTGCGATCCACTCATCTTGAGTGAAGAAGCATTGAGAATAGCTCTGGTGAGTCAGCACTAGCAGCTGAGGAGCCCTGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101066876 939 + 187378091 TCAGAAGTTCCTCTAttgcaaactaaaaataaaattctaggcctcctcctccctcccaccattGCCTGAACAGACACCCTCTTGACCAAGGGGACTCCAGAAAAACCTTAAAACCGAGTTCCTGGCCATGATGGAATGTGAGGTTGGATGCGCCTTATTATACCCCCTCCCTTTTGCAGTttagaca---caactgaccagcattaatgttaaaatagagatcataagattGACAAAACAAGCTCTTTGTGGCGATAAGATGTCACATTATAAACAGGACCTAAGGCAATGCCCAGCAAGGGTGAAGTC-ACATACTCctacacttaaagaataaactgaagtgggtggatcacttgaggtcaggagttcgagaccagcctggtcaccatggtgaaactcctgtct-ctattaaaaatacaaaaattagccgtgcatggtgatggatgcctgtaatctcagctactcaggaggctgaggcaggagaattgcttgaatccggaaggcggaggttgcagtgagcccagatagcgccactgcactccaacctaggagacagagtgagactccgtctccaaaataaataaataaat-aaataaaataaaattcaaaatctcaTCACCTCTACTAGTACTATTCTGATCAAAGCCACTGTTATTTCTCATGTAGATTATTGTAATAGCCACCCAAACTAAACCTTCTGCTTCCATCCTTGCCCCTCCCCAATCTGTTCTTCACCCA-TCAGTCAGAGTGATCCCTTCAAAACACAAGTCAAATAAAATCACTTCTCTCTGTTCAAAATCTTCTAGCAGTTCCTCAAATCACTCCGTGTAGGAGACTACA------------------------------------ATGAGTGAAGGGACCTAATAGGTCTGCGATCCACTCATCTTGAGTGAAGAAGCACTGAGAATTGCTCTGGTGAGTCAGCACTAGCAGCTGAGGAGCCCtgag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4931514 932 + 91754291 TCAGAAGTTCCTCTATtgcaaactaaaaataaaattctaggccccctcctccctcccaccattgcctgaacagacaccctcttgaccaaggggactccagaaaaaccttaaaaccgagttcctggccatgatggaatgtgaggttggatgcgccttattataccccttcccttttgcagtttagacg---caactgaccagcattaatgttaaaatagagatcataagattgacaaaacaagctctttgtggcgataagatgtcacattataaacaggacctaaggcaatgcccagcaagggtaaagtc-acat--------acttaaagaataaactgaagtgggtggatcacttgaggtcaggagttcaagaccagcctggtcaccatggtgaaactcctgtct-ctattaaaaatacaaaaattagctgtgcatggtgatggatgcctgtaatctcagctactcagaaggctgaggcaggagaatcacttgaatccggaaggcggaggttgcagtgagccaagatagcaccactgcactccaatctaggagacagagtgagactccgtctccaaaataaataaataaataaaataaaaTAAAATCCAAAAtctcatcacctctactagtactattctgatgaaagccactgttatttctcatgtagattattgtaatagccacccaaactaaaccttctgcttccatccttgcccctccccaatctgttcttcaccca-tcagtcagagtgatcccttgaaaacacaagtcaaataaaatcacttctctctgttcaaaatcttctagcagttcctcatatcactccgtgtaggagACTACA------------------------------------ATGAGTGAAGGGACCTAATAGGTCTGCGATCCACTCATCTTGAGTGAAGCAGCACTGAGAATAGCTCTGGTGAGTCAGCACTAGCAGCTGAGGAGCCCTGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92411633 958 - 98464013 TCAGAGGTTCCTCTATtgcagattaaaagtaaaattctaggccccctcctccctcccaccattgactgaacagacaccctcttggccaaggggactccagaaaaaccttaaaaccaggttcccggccatgatggaatgggaagttggacacgccttattataccccctcccttttgcagtttagacacagcaacgggcaggcattaatattaaaacagagatcataagattgacagaacaggctctttgtggcgataacataccacattataaacaggacctaaggcaatgcccagcaagggtgaagtc-acacactcc------taaagaataTActgaggctggtggatcacttgaggtcaggagttcaagaccagcttggccaccatggtgaaa-ccctgtct-ttactaaaagtacaaaaattaactgggcatcgtggcacatgcctgtaattccagctactcaggaggctaaggcaggataatcacttgaacccaggaggcagaggttgctgtgagctgagatcgcgccactgcactctagcttgggagacagggggagaccctgtctcaa---------------aaaaaaaaaaaaaaaTTCAAAAtctcattacctctactagtactatcccaatcaaagccactattatttcttatctagattattgcaatagccaccctaactacaccttcttcttccatccttgtccctccccgatctgttcttcactcattcagccagagtgatctcttcaaaacataagtcaaataaaatcacttctctctgctcgaaatcttccagcagatcctcaaagcactcagtgtCGGATGCTACAGTGAGTGGTGTCGAATACTTAGAATAGGGTGCTACTGTGAGTGAAGGGACCTAGTAGGACTGTGATCCACTCATCTTGAGTGGAGAAGTGCTGAGAATAGAGCTGGTGACTCAGCACTAGCTGCTGAGGAGTCCAGAG i calJac3.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I a score=123945.000000 s hg38.chr3_KI270781v1_alt 53455 162 + 113034 gaagaggctttggaagtgcacaggactggaagt-acagtcttggaaagtcaccacgtctggggagagga-aatcaacgtagaaggtaaagaaactgagaggtaaagaaaagaaaggaa-caaactggtggaaagccagagtcgcacagaaacaaaagagaatcag s panTro4.chr3 13802746 163 - 202329955 gaagaggctttggaagtgcacaggactggaagtaacaatcttggaaagtcaccacgtctggggagagga-aagcaacgtagaaggtaaagaaactgagaggtaaagaaaagaaaggaa-caaactggtggaaagccagagtcgcacagaaacaaaagagaatcag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13785271 165 - 202140232 gaagaggctttggaagtgcacaggactgggagtaacaatcttggaaagtcaccgcttctggggagaggagaagcaacttagaaggtaaagaaactgagaggtaaagaaaagaaaggaagcaaactggtggaaagccagggtcgtacagaaacaaaagagaatcag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14337092 163 - 123690457 gaagaggctttggaagtgcacaggactggaagtaacaatcttggaaagtcaccacttctggggagagga-aagcaacttacaaggtaaagaaactgagaggtaaagaaaagaaaggaa-caaactggtggaaagccagagtcgtacagaaacaaaagagaatcag i nomLeu3.chr11 C 0 C 0 s calJac3.chr15 92412591 152 - 98464013 GAAGAGGCTTTGGAAGTGCGCAGGACCGGAAGTAACCATCTTGAAAAGTCACCACTTCCGGGGAGAGGA-AAGCAACTTAGAAGGTAAAGAAACTGGGAGGTAAAGAAAAGAAAGGAC-caaa----tggagagcaaaaat-------aaataaataaaaagcag i calJac3.chr15 C 0 I 5258 e chlSab2.chr15 4932446 0 + 91754291 C e papAnu2.chr2 101067815 0 + 187378091 C e macFas5.chr2 103274147 0 - 192460366 C e rheMac3.chr2 103630710 0 + 192599291 C e canFam3.chr34 24784771 16718 - 42124431 I a score=489511.000000 s hg38.chr3_KI270781v1_alt 53617 1017 + 113034 aatcaaaagacataccaac--ctctctctcacaaaagcaccatctattcatgaaaattgaacttcacggtaccaatagaagagggcattcttgaacgaagaatcttagtaagccactcaagtcc-ttcatccccatctcacaaagaaacacttgttattgataggccagaaaaattcaatatacttttgagtaaacaaaaatgacatgcagcacttacacaaagccactatgaga-agaaaacagaaagtcagaggctactatcttcaactaatgaatttctta-cctgccaaaacaactaagagacaggaaaattatgacacagtgtctaatatgaattaaata-ttattagacaggtatttacag-atataaaagaaca-ccaaaattcaaaaaatcaggacagaaatggacaaaaataactcatgaagtgagttaataaaactcagg-aaaaaagtaaaagaaaaaactaaaccttttcagaaataaagattaaatcacaagatgcctaaaggcaaatagattcaccttcaactgaaaatataataagggatataggcaggaaaacaaaaacaaataaacaggtaaaatacaatcag--agaaaaaagtgatagctatagaaaataaacaaaaaattatata-ctgtacat-ataattagaa--ttgcctaaaaa-gcaaaacaaaacgatgggacagaaataatatttaaaactataatccaataa-tgattgtggcaatgatcacacaactataaattatttgtcaaaacccatcaaattgtacacttaaaagtagttaaGGTTGGCTGGACGTGAGTAGTTAAGGTTggctggacgtggtggctcacgtctgtaatcccagcactttgggaggccaaggtggggagatca-cctgaggtcaggagtttgagactagcctggtcagcaaggggaaacccagtctctactaaaaatacaaaaattagccgggcgtggtttggggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgctt s panTro4.chr3 13802909 1020 - 202329955 aatcaaaagacataccaacctctctctctcacaaaagcaccatctattcatgaaaattgaacttcacggtaccaatagaagagggcattcttgaacgaagaatcttagtaagccactcaagtcc-ttcatccccatctcacaaagaaacacttgttattgataggccagaaaaattcaatatacttttgagtaaacaaaaatgacacgtagcatttacacaaagccactatgaga-agaaaacagaaagtcagaggctactatcttcaactaatgaatttctta-cccggcaaaacaactaagagacaggaaaattatgacacagtgtctaatatgaattaaata-ttattagacaggtatttacag-atataaaagaaca-ccaaaattcaaaaaatcaggacagaaatggacaaaaataactcatgaagtgagttaataaaactcaggaaaaaaagtaaaagaaaaaattaaaccttttcagaaataaagattaaatcacaagatgcctaaaggcaaatagattcaacttcaactgaaaatataataagggacataggcaggaaaacaaaaacaaataaacaggtaaaatataatcag--agaaaaaagtgacagctatagaaaataaacaaaaaattatata-ctgtacat-ataattggaa--ttgcctaaaaa-gcaaaacaaaacgatgggacagaagtaatatttaaaactataatccaataa-tgattgtggaaatgatcacacaactataaattatttgtcaaaacccatcaaattgtacacttaaaaGTAGTTAAGGTTGGCTGGACGTGAGTAGTTAAGGTTggctggacgtggtggctcacgtctgtaatcccagcactttgggaggccaaggtggggagatca-cctgaggtcaggagtttgagactagcctggtcagcatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggggggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgctt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13785436 1005 - 202140232 aattaaaagacataccaacctctctctctcacaaaagcactatctattcatgaaaattgaacttcacggtaccaatagaagagggcattcttgaacaaagaatcttagtaagccactcaagtcctttcatccccatctcacaaagaaacacttgttattgataggcca-aaaaattcaatatacttttgagtaaacagaaatgacacatagcatttacacaaagccactatgagatggaaaacagaaagtcagaggctagtatcttcaactaatgaatttcctacccctccaaaacaactaagagataggaaaattatgacacagtgtctaatatgaattaaatatttattagacaggtatttaaagtttataaaagaacanccaaaattcaaaaaatcaggacagaaatggacaaaaataactcatgaagt--gttaataaaactcagg-aaaaaactaaaagaaaaaattaaaccatttcagaaataaagattaaattacaagatgcctaaaggcaaatagattcaacttcaactgaaaatataataaaggacataggcaggaaaacaaaaacaa--aaagaggtaaaatacaatcaggagaaaaaaagtgatagctatagaaaataaacaaaaaattatatacctgtacataataattggaaattggcctaaaaaggcaaaacaaaacgatgggacagaagtaatatttaaaactataatccaataattgattgtggcaatgattgcgcaactataaattatttgtcaaaacccatcaaattgtacacttaaa------------------------agtaattaaGGTTggctggacgtggtggctcacgcctgtaatcccagcactttgggaggccaaggtggggagatcaccctgaggtcaggagtttgagactagcctggtcagcatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatacctt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14337255 985 - 123690457 aatcaaaagacataccaacctctctctctcacaaaagcactatctattcatgaaaattgaacttcacggtaccaatagataagggcattcttaaacgaagaatcttagtaagccactcaagtct-tttatccccatctcacaaagaaacacttgctattgataggccagaaaaattcaatatacttttgagtaaacaaaaatgacacgtagcatttacacaaagccactatgaga-agaaaacataaagtcagaggctagtatcttcaactaatgaatttctta-cgggccaaaacaaccaagagagaggaaaattatgacacagtatctaatatgaattaaata-ttattaaacaggtatttaaag-ataaaaaagaaca-ccaaaattcaaaaaatcaggacggaaatggacaaaaataactcgtgaagtgagttaataaaactccgg-aaaaaagtaaaaggaaaaattaaaccatttcagaaataaagattaaattacaagatgcctaaaggcaaatagattcaacttcaactaaaaatatagtaagagacataggcaggaaaacaaaaacaaataaagaggtaaaatataatcag--agaaaaaagtgatagctatagaaaatatacaaaaaattatata-ctgtacat-ataattggaa--ttgcctaaaaa-gcaaaacaaaacgataggacagaagtaatatttaaaattataatccaacaa-tgattgtggcaatgatcgcacaacta-aaattatttgtcaaaacccatcaaattgtacacttaaa------------------------aGTAATTAAGGTTggctggacatggtggcttacgcctgtaatcccagcactttgggaggccaaggtagagagatca-cctgaggtcaggagtttgagactagcctggtcagcatggtgaaaccccgtctctactaaaaatacaaaaatta---------ggtggtaggtgcctatagtcccagctactcaggaggctgaggcaggagaatcactt i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4932446 0 + 91754291 C e papAnu2.chr2 101067815 0 + 187378091 C e macFas5.chr2 103274147 0 - 192460366 C e rheMac3.chr2 103630710 0 + 192599291 C e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=1091572.000000 s hg38.chr3_KI270781v1_alt 54634 533 + 113034 gaacctgggagccaaaggttccagtgagccgagattgcgccattgcactccagcctggataataagagcgaaactgtgtctc-aaaataaataaataaataaaataaaaTATAAAGTGTTTAACCAtgaaaattataatctaagaaaactttctggaattaaaaaaggactaaatctagatgttgaatgtatttatatacacaagaaaattgaccagaatggccacctctgagacatatctgagtaaagctattataaacagaaagaaaac-attctgttagcaaaaattccaaatcacata-caaagtaaa-gaaaatcaagtggtcatcCTat-gtgataatct-ctagt-gcaaaactc--aaagaatagt-aaaagaatgcataactgtaagttaatacgag-aaaaaataattat-aaaaaata-ttttattaatct-aaaagaagccaagaaaggaagaaaag-aagagacataaaac---agatgtgtcaaataacatgcaaacagagagtaattgta-aaccaaacc-ttat-ctggaataacagt s panTro4.chr3 13803929 533 - 202329955 gaacctgggagccagaggttccagtgagccgagattgcaccattgcactccagcctgggtaataagagcgaaactgtgtctc-aaaataaataaataaataaaataaaaTATAAAGTGTTTAACCAtgaaaattataatctaagaaaactttctggaattaaaaaaggactaaatctagatgttgaatgtatttatatacacaagaaaattgaccagaatggccacctctgagacatatctgagtaaagctattataaacagaaagaaaat-attctgttagcaaaaattccaaatcacata-caaagtaaa-gaaaatcaagtggtcatcCTat-gtgataatct-ctagt-gcaaaactc--aaagaatagt-aaaagaatgcataactgtaaattaatacgag-aaaaaataattat-aaaaaata-ttttattaatct-aaaagaagccaagaaaggaagaaaag-aagagacataaaac---agatgtgtcaaataacatgcaaatagagagtaattata-aaccaaacc-ttat-ctggaataacagt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13786441 553 - 202140232 gaacctgggagccggaagttccagtgagtcgagattgcaccattgcactccagcctggacaataagagtgaaactgcgtctc-aaaataaataaataaataaaataaaaTATAAAGTGTTTAACCATAaaaattataatctaagaaaactttcaggaattaaaaaaggactaaatctagatgttgaatgcatttatatacataagaaaattgaccagaatggccacctctgagacgtatctgagtaaagctattataaacagaaagaaaataattctgttagcaaaaactccaaatcacataccaaagtaaaggaaAATCAAGTGTCCATCCTatggtgataatctcctagtggcaaaactccaaagaaatagtaaaaagaatgcataactgtaagttaatacgagaaaaaaataattataaaaaaatatttttattcatctaaaaagaagccaagaaaggaagaaaagaaagggacataaaacacnaggtgtgtcaaataacatgcaaatagagagtaattatataactagaccnttatcctggaataacagt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14338240 530 - 123690457 gaacctgggagccggaggttccagtgagccgagattgcgccattgcactccagcctggacaataagagcgaaactgtgtctcaaaaataaataaataaataaaataaaaTATAAAGTGTTTAACCAtaaaaattataatctaagaaaactttctggaattataaaaggactaaatctagatgttgaatgcatttatacac---agaaaattgaccagaatggtcacctctgagacgtatctgagtaaagctattataaacagaaagaaaat-attctgttagcaaaaattccaaatcacata-caaagtaaa-gaaaatcaagtggtcat-cTac-gtgataatct-ctggt-gcaaaactc--aaagaatagt-aaaagaatgcataactgtaagttaataagag-aaaaaataattat-aaaaaata-ttttattcatct-aaaagaagccaagaaaggaagaaaag-aagggacataaaac---aggtgtgtcaaataacatgcaaatagagagtaattata-aaccaaacc-ttat-ctggaatAACAGT i nomLeu3.chr11 C 0 I 4 s rheMac3.chr2 103630710 485 + 192599291 gaatctgggaggcggaggttcctgtgagccaagattgcgccattgcactccagcctggacaacaagagcgaaattctgtctc-aaaataaat---------aaataaaaTAT-AAGTGTTTAACCAtaaaaattataatctaagaaaactttctggaattaaaaaatgactaaatctagatgttgaatgcatttatatacatgagaatattgaccagaatgaccacctctgagatgtatctgagtaaaactattatgaacagaaagaaaaa-attctctcagcaaaaattccaaatcacata-caaagtaaa-gaaaatcaagtggtcatcCTat-gtgataatct-ctagt-gcaaaactc--aaagaatagt-aaaagaatgcataa-----------------------------------------ttttattcatct-aaaagaagccaagaaaggaagaaaag-aagggacataaaac---aggtgtatcaaataacacgcaaatagagagtaattata-aacccaacc-ttat-ctggaataatggt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103274147 485 - 192460366 gaatctgggaggcggaggttcctgtgagccaagattgcgccattgcactccagcctggacaacaagagcgaaattctgtctc-aaaataaat---------aaataaaaTAT-AAGTGTTTAACCAtaaaaattataatctaagaaaactttctggaattaaaaaatgactaaatctagatgttgaatgcatttatatacatgagaatattgaccagaatgaccacctctgagatgtatctgagtaaaactattataaacagaaagaaaaa-attctctcagcaaaaattccaaatcacata-caaagtaaa-gaaaatcaagtggtcatcCTat-gtgataatct-ctagt-gcaaaactc--aaagaatagt-aaaagaatgcataa-----------------------------------------tattattcatct-aaaagaagccaagaaaggaagaaaag-aagggacataaaac---aggtgtgtcaaataacacacaaatagagagtaattata-aacccaacc-ttat-ctggaataatggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101067815 485 + 187378091 gaacctgggaggcggaggttccagtgagccaagattgcgccattgcactccagcctggacaacaagagcgaaattctgtctc-aaaataaat---------aaataaaatat-aagtgtttaaccataaaaattataatctaagaaaaCTTTCTGGAATTAAAAAACGACTAAATCTAGATGTTGAATGCATTTATATACATGAGAATATTGACCAGAATGACCACCTCTGAGGTGTATCTGAGTAAAACTATtataaacaggaagaaaaa-attctCTTAGCAAAAATTCCAAATCACATA-TAAAGTAAA-GAAAATCAAGTGGTCATCCTAT-GTGATAATCT-CTAGT-GCAAAACTC--AAAGAATAGT-AAAAGAATGCATAA-----------------------------------------TTTTATTCACCT-AAAAGAagccaagaaaggaagaaaag-aagggacaTAAAAC---AGGTATGTCAAATAACATGCAAATAGAGGGTAATTATA-AACCCAACC-TTAT-CTGGAATAATGgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4932446 485 + 91754291 gaacctgggaggcggaggttccagtgagccaagattgcgccattgcactccagcctggacaacaagagcgaaattctgtctc-aaaataaat---------aaataaaaTAT-AAGTGTTTAACCAtaaaaattataatctaagaaaactttctggaattaaaaaatgactaaatctagatgttgaatgcatttatatacatgagaatattgaccagaacgaccacctctgagatgtatctgagtaaaactattataaacagaaagaaaaa-attctcttagcaaaaattccaaatcacatg-caaagtaaa-gaaaatcaagtggtcatcCTat-gtgataatct-ctagt-gcaaaactc--aaagaatagt-aaaagaatgcataa-----------------------------------------ttttattcatct-aaaagaagccaagaaaggaagaaaag-aagggacacaaaac---aggtgtgtcaaataacatgcaaatagagagtaattata-aacccaacc-ttat-ctggaataatggt i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=729948.000000 s hg38.chr3_KI270781v1_alt 55167 451 + 113034 aaatgcaaatggactaaatattgcaa-gtaaaaggctaatgttgtcaaactgggttttaaaa---ataCTGCCTATGGCTTATggctgggcacagtggctcatgcctgtaatcccagcactttgagaggccaagggaggtggatcacctgaggtcaggagttcaaaatcagcctggtcaacttggtgaaaccccatctctactaaaaaacacacaaaaaaattagcctggcatggtggcaggcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggagacggcggttgcagtgagccaagatcatgccccagcactccaagctggatgacagagtaagactccatcc-aaaa---aaaacaaa--aaaacaaaacaaaaaaCTGCTTATTAGCCAATGTCACTGCCTTTCAATTAAAAAAAA--TGTTTGTggccggccat s panTro4.chr3 13804462 456 - 202329955 aaatgcaaatggactaaatattgcaa-gtaaaaggctaatgttgtcaaactgggtttaaaaa---atactgcttatggcttatggctgggcacagtggctcatgcctgtaatcccagcactttgagaggccaagggaggcggatcacctgaggtcaggagttcaaaatcagcctggtcaacacggtgaaaccccatctctactaaaaaacccacaaaaaaattagtctggcatggtggcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagttggaggttgcagtgagccaagatcatgccccagcactccagcctggatgacagagtgagactccatcA-AAaaaacaaaacaaaacaaaacaaaacaaaaacctgcttattagccattctcattgcctttcaattaaaaaaaa--tgtttgtggccgggcat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13786994 444 - 202140232 aaatgcaaatggactaaatattgcaaggtaaaaggctaacgttgtcaaactggggtttaaaaaATATACTGCTTATGGCTTATggctgggcacagtggctcatgcctgtaatcccagcactttgagaggccaagggaggcagatcacctgaggtcaggagttc-aaatcagcctggccaacatggtgaaaccccatctctactaaaaaacacacaaaaaaattagccgggcatggtggcaggcacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacctgagaggcggaggttgcagtgaaccaagatcatgccccagcactccagcctggatgacagagtgagactccatcc-aaaa---aaaaaaaa------------aaaaaCCTGCTTATTAGCCAGTGTCACTGCCTTTCAATTAAAAAAAA--TGTTTGTggccaggcac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103631195 444 + 192599291 aaatgcaaatggactaaatatcgcaa-gtaaaaggctaatgttgtcaaactgggtttaaaaa---atactgcttatggcttatggctgggcacggtggctcatgcctataatctcagcactttgagaggccgagggaggcggatcacctgaagtcaggagttcaaaaacagcctggccaacatggtgaaaccccgtctctactaaaaaatac-aaaaaaaaggagccgggcatggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaagagaatcacttgaaccgaggaggcgaaggttgcagtgagccaagctcacacctcagcactctagtctgggtgacagagcgagattcc-tcg-caaa---aagaaaaa--------aaaaaatatattgcttattagccagtgtgactgcctttcaattaaaaaaga-tttttttgggccgggcac i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103274632 447 - 192460366 aaatgcaaatggactaaatatcgcaa-gtaaaaggctaatgttgtcaaactgggtttaaaaa---ataCTGCTTATGGCTTATggctgggcacggtggctcatgcctataatctcagcactttgagaggccgagggaggcggatcacctgaagtcaggagttcaaaaacagcctggccaacatggtgaaaccccgtctctactaaaaaatac-aaaaaaaaggagccgggcatggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaagagaatcacttgaacccaggaggcgaaggttgcagtgagccaagatcacacctcagcactctagtctgggtgacagagtgagattccatct-caaa---aagaaaaa------agaaaaaaaaTATTGCTTATTAGTCAGTGTGACTGCCTTTCAATTAAAAAAGA-TTTTTTTTggccgggcac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101068300 443 + 187378091 aaatgcaaatggactaaataTCGCAA-GTAAAAGGCTAATGTTGTCAAACTGGGTTTAAAAA---ATACTGCTTATGGctgatggctgggcacggtggcttatgcctataatctcagcactttgagaggccgagggaggcggatcacctgaagtcaggagttcaaaaacagcctggccaacatggtgaaaccccgtctctactaaaaaatac-aaaaaaaagtagccgggcatggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaagagaatcacttgaacccaggaggcgaaggttgcagtgagccaagatcacacctcagcactctagtctgggtgacagagcaagattccatct-caaa---aaaaaa----------aaaaaaaatactgcttatTAGCCAGTGTGACTGCCTTTcaattaaaaaaga-ttttttttggcCGGACAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4932931 452 + 91754291 aaatgcaaatggagtaaatatcgcaa-gtaaaaggctaatgttgtcaaactgggtttaaaaa---ataCTGCTTATGGCTTATggctgggcatggtggctcatgcctataatctcagcactttgagaggccgaaggaggcggatcacctgaagtcaggagttcaaaaacagcctggccaacatggtgaaaccccgtctctactaaaaaatacaaaaaaaaagtagccgggcatggtggcaggcacctgtagtcccagctacttgggaggctgaggcaagagaatcgcttgaacccaggaggcgaaggttgcagtgagccaggatcacacctcagcactctagtctgggtgacacagcgagattccatctacaaa---aaaaaaaa----aaaaaaaaaaaaTACTACTTATTAGCCAGTGTGACTGCCTTTCAATTAAAAAAGATTTTTTTTTggccgggcat i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I e nomLeu3.chr11 14338770 4 - 123690457 I a score=2400408.000000 s hg38.chr3_KI270781v1_alt 55618 1046 + 113034 ggtggctcacacctataatcccagcactttgggaggcaga-ggcgggcagatcacgaggtcaggagtttgagactggcttggccaacatagtgaaaccccgtttctaccaaaaatac----aaaaaaaattagctgggtgtggtggcaagggcctgtaatcccagctacttgggaggctgagcaggagagtcaattgaa---cccgggaggcggacgttgcagtgagccgagattgcgtcactgtactccagcccaggagacagtgcaagac-tccgtc-----------aaaaa------aaaaaaaaaTTAAGtattgcttaca-aaagacacacactaaatagaaggacacagatggttgaaagcaaaaggatggaaatattatattccacataaaagctt--acccaaagatagtgatactaatgttaagcaatgtagac-attaagccatgaagctctagtagaaa----taagttcatttcataatgataaagtggccaattgaatag-gaagacatcacagtcgtaaatctatatgtagccgataacatagctttaaaatatataaagaaaactaggcagaactaaaggagaaaaagacaaattcacagtcatagaggaaaattttaatacttctcgctcaacatcttgatagaaaaggtatacacaccaaaaaaactgataaggatataaaagtatgaacaacacacttaaaaacttgacccagtcatctttcccttcccagagcccctctctctcactagagagagagctgttctcctttctctttcttctgcctattaaacctccgctcctaaactccttg----------tgtcctaaattttcttaacaaaagatgacgaaccccaggtattcaccccagacaatgaaactgcttcagtgtcataattttgcaaaggtggtttcGATCTCAATTTAATACTTTTTAATTTAGAAATGAT-GGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTTT------TGTGTTATAAAATGTCATGGAGATACATTAAAAGATTTTCTTAGAATAATCTGTAAACTATTTAAAAGGTAACAATA s panTro4.chr3 13804918 1048 - 202329955 ggtggctcacacctgtaatcccagcactttgggaggcaga-ggcaggcagatcactaggtcaggagtttgagactggcttggccaacatagtgaaaccctgtttctaccaaaaatac----aaaaaaaattagctgagcatggtggcaagcgcctgtaatcccagctacttgggaggctgagcaggagagtcacttgaa---cccgggaggcggaggttgcagtaagccgagattgcgtcactgtactccagcccaggagacagtgcaagac-tctgtc---------aaaaaaa------aaaaaaaaattaagtattgcttaca-aaagacacacactaaatagaaggacacagatggttgaaagcaaaaggattgaaatattacattccacataaaagctt--acccaaaagtagtgatactaatgctaagcaatgtagac-attaagccatgaagctctagtagaaa----taagttcatttcataatgataaagtggccaattgaatag-gaagacatcacagtcgtaaatctatatgtagccgataacatagctttaaaatatataaagaaaactagacagaactaaaggagaaaaagacaaattcacagtcatagaggaaaattttaatacttctcgctcaacatcttgatagaaaaggtatatacaccaaaaaaactgataaggatataaaagtatgaacaacacacttaaaaacttaacccagtcatctttcccttcccagagcccctctctctcactagagagagagctgttctcctttctctttcttctgcctattaaacctccgctcctaaactgctcg----------tgtcctaaattttcttaacaaaagatgacgaaccccaggtattcaccccagacaatgaaactgcttcactgtcataattttgcaaaggtggtttcaATCTCAATTTAATGCTTTTTAATTAAGAAATGAT-GGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTTT------TGTGTTATAAAAGGTCATGGAGATACATTAAAAGATTTTCTTAGAATAATCTGTAAACTATTTAAAAGGTAACAATA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13787438 1055 - 202140232 ggtggctcagacctgtaatcccagcactttgggaggcagagggcaggcagatcacgaggtcaggagtttgagaccagcttggccaacatagtgaaaccccgtttctaccaaaaatac---aaaaaaaaattagctaggcgtggtggcgagtgcctgtaatcccagctacatgggaggttgagcagaagagtcacttgaataccgcgggaggtggaggttgcagtgagccaagattgtgtcactgtactccagcccaggagacagtgcaagacttctgta----aataaaaaaaaa------aaaaaaaaaTTAAGtattgctcacataaagacacacactaaatagaaggacacagatggttgaaagcaaaagggtggaaatattatattccacataaaagctttaacccaaaggtagtgatactaatgttaagcaatgtagacaattaagccatgaagctctagtagaaa----taagttcatttcataa--------tggccaatcgaatagtgaagacatcacagtcgtaaatctatatgtagccgataacatagctttaaaatatataaagaaaactaggcagaactaaag--gaaaaagacaaattcacagtcatagaagaaaattttaatacttcttgctcaacatcttgatagaaaaggtatacacaccaaaaaaactgataaggatataaaagtatgaacaacacgcttaaaaacttgacccagtagtctttcccttcccagagcccctgtctctcactagagagagagctgttctcctttctctttcttctggctattaaacctccgctcctaaactcctcg----------tgtcctaaattttcttaacaaaagatgacgaaccccaggtattcaccccagataatgaaactacttcaCTGTCATAATTTTGCAAAGGTGGTTTTGATCTCAGTTTAATACTTTTTAATTTAGAAATGATCGGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTTT------TGTGTTATAAAATGTCATGGAGATACATTAAAAGATTTTCTTAGAATAATCCGTAAACTATTTAAAAGGAAACAATA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14338774 1043 - 123690457 ggtggctcacacctgtaatcccagcactttgggaggcaga-ggtgggcagatcacgaggtcaggagtttgagaccggcttggccaacatagtgaaaccccgtttctaccaaaaatac----aaaaaaaattagctgggtgtggtggcgagcgcctgtaatcccaactacttgggaggctgagcaggagagtcacttgca---cccgggagttggaggttgcagtgagccgagattgcatcactgcactccagcccaggagacagtgcaagac-tctgtc--------------aa------aaaaaaaaaTTAAGtattgcttaca-aaag--acacactaaatagaaggacacagatggttgaaagcaaaaggatggaaatattatattccacataaaaactt--acccaaaggtagtgatactaatgttaagctatgtagac-attaagctatgaagctctagtagaaa----taagttcatttcataatgataaagtggccaattgaatag-gaagacatcacagtcgtaaatctatatgtagccgataacatagctttaaaatatataaagaaaactaggcagaactaaaggagaaaaagacaaattcacagtcatagaggaaaattttaatacttcttgctcaacatcttgatagaaaaggtatacacaccaaaaaaactgataaggatataaaagtatgaacaacacacttaaaaacttgacccagtcatctttcccttcccagagcccctctctctcact----agagaactgttctcctttctctttcttctgcctattaaacctccgctcctaaactcctcg----------tgtcctaaattttcttaacaaaagatgacgaaccccaggtattcaccccagacaatgaaactgcttcaCTATCATAATTTTGCAAAGGTGGTTTTGATCTCAATTTAATACTTTTTAATTTAGAAATGAT-GGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTTTTTGTGCTATATTATAAAATGTCATGGAGATACATTAAAAGATTTTCTTAGAATAATCTGTAAACTATTGAAAAGGTAACAATA i nomLeu3.chr11 I 4 C 0 s rheMac3.chr2 103631639 1077 + 192599291 ggttgctcacacatgtaatcccagcactttgggaggcaga-ggcgggcagatcatgaagtcaggagtttgagactggcttggccaacacagtgaaagcccatctctactaaaaatac--aaaaaaaaaattagctgggcgtggtggcaagtgcctgtaatcctagctacttgggaggctgagcaggagaatcgcttgaa---tgcaggaagtggaggctgcagtgagccgagattgcatcactgcactctaggccaggcaacagtgcaagac-tctgtctcaaaacaaaaaaaaaacaccaaaaaaaaatttaagtattgcttaca-aaagacacacactaaatagaaggacacagatggttgaaagcaaaaggatggaaatactatattccacataaaagctt--acccaaaggtagtgatactaatgttaagcactgtagac-attaagccatgaagctgtagtagaaataagtaagttcatttcacaatgataaagtggccaattgaatag-gaagacataacagtcgaaaatctatatgtagctaataacattgctttaaaatacataaagaaaactaggcagaactacaagagaaaaagacaaattcacagtcatagaggaaaattttaatacttctctcttaacatcttgatagaaaaggtatacac-ccaaaaaaactgataaggatataaaagtatgaacaacacacttaaaaacttgacccagttgtctttgccttcccgaagcccctctctctcactagagagagagctgtt---ctttctctttcttctgcctattaaaccttcactcctaaactccttgtgtgtgttcatgtcctaaattttcttaacaaaagatgacaaaccccagctattcaccctaggcaatgaaactgcttcaCTGTCATAATTCTGCAAAGGTGGTTTTGATCTCAATTTAATACTTTTTAATTTAGAAATGAC-GGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTGT----GCTGTATTATAAAATGTCACGGAGATACATTAAAAGATTTTCTGAGAATAATCCGTAAACCATTTAAAAGGTAACAATA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103275079 1077 - 192460366 ggttgctcacacatgtaatcccagcactttgggaggcaga-ggcgggcagatcatgaagtcaggagtttgagactggcttggccaacacagtgaaagcccatctctactaaaaatac--aaaaaaaaaattagctgggcatggtggcaagtgcctgtaatcctagctacttgggaggctgagcaggagaatcgcttgaa---tgcaggaagtggaggctgcagtgagccgagattgcatcactgcactctaggccaggcaacagtgcaagac-tctgtctcaaaacaaaaaaaaaacaccaaaaaaaaaTTTAAGtattgcttaca-aaagacacacactaaatagaaggacacagatggttgaaagcaaaaggaaggaaatactatattccacataaaagctt--acccaaaggtagtgatactaatgttaagcactgtagac-attaagccatgaagctgtagtagaaataagtaagttcatttcacaatgataaagtggccaattgaatag-gaagacataacagtcgaaaatctatatgtagctaataacattgctttaaaatatataaagaaaactaggcagaactacaagagaaaaagacaaattcacagtcatagaggaaaattttaatacttctctcttaacatcttgatagaaaaggtatacac-ccaaaaaaactgataaggatataaaagtatgaacaacacacttaaaaacttgacccagttgtctttgccttcccgaagcccctctctctcactagagagagagctgtt---ctttctctttcttctgcctattaaacctccactcctaaactccttgtgtgtgtccatgtcctaaattttcttaacaaaagatgacaaaccccagctattcaccctaggcaatgaaactgcttcaCTGTCATAATTCTGCAAAGGTGGTTTTGATCTCAATTTAATACTTTTTAATTTAGAAATGAC-GGTAAAACTTTATAATATACATACAATTAGCATTTTTCTTTGT----GCTGTATTATAAAATGTCACGGAGATACATTAAAAGATTTTCTGAGAATAATCCGTAAACCATTTAAAAGGTAACAATA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101068743 1075 + 187378091 AGTTGCTCacacacgtaatcccagcactttgggaggcaga-ggcgggcagatcatgaagtcaggagtttgagactggcttggccaacacagtgaaagcccatctctactaaaaatac-aaaaaaaaaaattagctgggcatggtggcaagtgcctgtaatcctagctacttgggaggctgagcaggagaatcgcttgaa---tgcaggaagtggaggctgcagtgagccgagattgcatcactgcactctaggccgggcaacagtgcaagac-tctgtctcaaaac--aaaaaaaacacc-aaaaaaaatttaagtattgCTTACA-AAAGACACACACTAAATAGAAGGACACAGATGGTTGAAAGCAAAAGGATGGAAATGCTATATTCCACATAAAAGCTT--ACCCAAAGGTAGTGATACTAATGTTAAGCACTGTAGAC-ATTAAGCCATGAAGCTGTAGTAGAAATAAGTAAGTTCATTTCACAATGATAAAGTGGCCAATTGAATAG-GCAGACATAACAGTCGAAAATCTATATGTAGCCAATAACATtgctctaaaatatataaagaaaactaggCAGAACTGtaggagaaaaagacaaattcacAGTCATAGAGGAAAATTTTAATACTTCTCTCTTAACATCTTGATAGAAAAGGTATACAC-CCaaaaaaaCTGATAAGGATATAAAAGTACGAACAACACACTTAAAAACTTGACCCAGTTGTCTTTGCCTTCCCGAAGCCCCTCTCTCTCACTAGAGAGAGagctgtt---ctttctctttcttctgcctattaaacctccactcctaaactccttgtgtgtgtccatgtcctaaaTTTTCTTAACAAAAGATGACAAACCCCAGCTATTCACCCTAGGCAATGAAACTGCTTCACTGTCATAATTCTGCAAAGGTGGTTACGATCTCAATTTAATACTTTTTAGTTTAGAAATGAT-GGTAAAACTTTATAATATGCATACAATTAGCATTTTTCTTTGT----GCTGTATTATAAAATGTCACGGAGATACATTAAAAGATTTTCTGAGAATAATCCGTAcaccatttaaaaagtaacaata i papAnu2.chr2 C 0 I 936 s chlSab2.chr15 4933383 1076 + 91754291 ggttgctcacacatgtaatcccagcactttgggaggcaga-ggcgggcagatcatgaagtcaggagtttgagactggcttggccaacacagtgaaagcccatctctactaaaaatacaaaaaaaaaaaattagctgggcgtggtggcaagtgcctgtaatcctagctacttgggaggctgagcaggagaatcgcttgaa---tgcaggaagtggaggctgcagtgagccgagattgcatcactgcactctaggccgggcaacagtgcaagac-tctgtctcaaaac--aaaaataacacc-aaaaaaaaTTTAAGtattgcttaca-aaagacacacactaaatagaaggacacagatggttgaaagcaaaaggatggaaatactatattccacataaaagctt--acccaaaggtagtgatactaatgttaagcactgtagac-attaagccatgaagctgtagtagaaataagtaagttcatttcacaatgataaagtggccaattgcatag-gaagacataacagtcaaaaatctatatgtagccaataacattgccttaaaatatataaagaaaactaggcagaactacaggagaaaaagacaaattcacagtcatagaggaaaattttaatacttctctcttaacatctttatagaaaagatatacac-ccaaaaaaacggataaggatataaaagtatgaacaacacacttaaaaacttgacccagttgtctttgccttcccgaagcccctctctctcactagagagagagctgtt---ctttctctttcttctgcctattaaacctccactcctaaactccttgtgtgtgtccatgtcctaaattttcttaacaaaagatgacaaaccccagctattcaccctaggcaatgaaactgctccaCTGTCATAATTCTGCAAAGGTGGTTTCGATCTCAATTTAATACTTTTTAACTTAGAAATGAC-GGTAAAACTTTATCATATACATACAATTAGCATTTTTCTTTGT----GCTGTATTATAAAATGTCACGGAGATACATTAAAAGATTTTCTGAGAATAATCCGTAAACCATTTAAAAGGTAACAATA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=711538.000000 s hg38.chr3_KI270781v1_alt 56664 414 + 113034 AAAATTATGTGAACTTTACAAACTGGTTCTTCAGTGCTACTtgtaggagagaaaggaaagcttccccttattctctgaaggtttgtcagttgctgtgtaactgacaatacacaga-ttaaaaaaagaaaaaggcataaaaattatttaacactcatgagaggggaattgcagaattattacccaataacccaataaagtcttcatgcttatatactcttcttcatagaggaaaagaagGGAAACA------------AACAAACAaacaaacttgacccagttgatacatat--agagctttacactcaataatgacaaaatacttatcgtagtttttcaagtgaacatgtaaaatgtattaacattgaccgcgtgctaggccataacagattctccaatatatttcaaaagacttaaaccattcagag s panTro4.chr3 13805966 414 - 202329955 AAAATTATGTGAACTTTACAAACTGGTTCTTCAGTGCTACTtgtaggagagaaaggaaagcttccccttattctctgaaggtttgtcagttgctgtgtaactgacaatacacaga-ttaaaaaaagaaaaaggcataaaaattatttaacaatcatgagaggggaattgcagaattattacccaataacccaataaagtcttcatgcttatatactcttcttcatagaggaaaagaagGGaaaca------------aacaaacaaacaaacttgacccagttgatacatat--agagccttacactcaataatgacaaaatacatattgtagtttttcaagtgaacatgtaaaatttattaatattgaccacgtgctaggccataacagattctccaatatatttcaaaagacttaaaccattcagat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13788493 412 - 202140232 AAAATTATGTGAACTTTACATATTGGTTCTTCAGTGCTACTtgtaggagagaaaggaaagcttccccttattctctgaaggtttgtcagttgctgtgtaactgacaatacacagatttaaaaaaagaaaaaggcatacaaattatttaacactcatgagaggggaattgcagaattattacccaataacccaataaggtcttcatgcttatatactcttcttcatagaggaaaagaagGGAaaca---------------aaacaaacaaacttgacccagttgatatatat--agagccttacactcaataatgacaaaatacatatcgtagtttttcaagtgaacatgtaaaatttattaacactgaccacatgctaggccataacagattctccaatatatttcaaaagatttaaaccattcagag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14339817 427 - 123690457 GAAATTATGTGAACTTTACATACTGGTTCTTCAGTGTTACTtgtaggagagaaaggaaagctttcccttattctctgaaggtttgtcagttgctgtgtaactgacaatacacaga-tttaaaaaagaaaaaggcatacaaattatttaacactcatgagaggggaattgcaggattattactcaataacccaataa-gtcttcatgcttatatactcttcttcttagaggaaaagaagGGaaacaaacaaacaaacaaacaaacaaacaaacttgacccagtcgatatatatagagagccttacactcaacaatgacaaaatacatatcatagtttttcaagtgaacatgtaaaatttattaacattgaccacatgctaggccataacagattctccaatatatgtcaaaagatctaaaccattcagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103632716 406 + 192599291 AAAGTTATGTGAACTTGACAAATTGGTTCTTTAGTGTTACTtgtaggagagaaaggaaagcttccccttactctctgaaggtttgccagttgctgtgtaactgacaatacacaga-ttaaaaaaagaaaaagacataaaaattatttaatactcattagaggggaattgtagaattattacccaataacccaataaggtcttcatgcttatatacttttcttcatagaggaaaagaagGGAAACA--------------------aacaaacttgacccagttgatatatac--acagaattacactcaacagtgacaaaatacatattgtagtttttcaagtgaacatgtaaaatttattgacactgaccacgtgctaggccataacagattctccaacatatttcaaaagatttaaatcattcagag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103276156 406 - 192460366 AAAGTTATGTGAACTTTACAAATTGGTTCTTTAGTGTTACTtgtaggagagaaaggaaagcttccccttactctctgaaggtttgccagttgctgtgtaactgacaatacacaga-ttaaaaaaagaaaaaggcataaaaattatttaatactcattagaggggagttgtagaattattacccaataacccaataaggtcttcatgcttatatacttttcttcatagaggaaaagaagGGAAACA--------------------aacaaacttgacccagttgatatatac--acagaattacactcaacagtgacaaaatacatactgtagtttttcaagtgaacatgtaaaatttattgacactgaccacgtgctaggccataacaggttctccaacatatttcaaaagatttaaatcattcagag i macFas5.chr2 C 0 I 321 s chlSab2.chr15 4934459 404 + 91754291 AAAGTTACGTGAACTTTACAAATTGGTTCTTTAGTGTTACTtgtaggagagaaaggtaagcttccccttactctctgaaggtttgccagttgctgtgtaactgacaatacacaga-ttaaaaaaagaaaaagac--aaaaattatttaatactcatgagaggggaattgtagaattattagccaataacccaataaggtcttcatgcttatatacttttcttcatagaggaaaagaagGGAAACA--------------------aacaaacttgacccagttgatatatat--acagcattacactcaacagtgacaaaacacatattgtagtttttcaagtgaacatgtaaaatttattgacattgaccacgtgctaggccataacagattctccaacatatttcaaaagatttaaatcattcagag i chlSab2.chr15 C 0 I 317 e papAnu2.chr2 101069818 936 + 187378091 I e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=23436.000000 s hg38.chr3_KI270781v1_alt 57078 9 + 113034 catattttc s panTro4.chr3 13806380 9 - 202329955 catattttc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13788905 9 - 202140232 catattttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14340244 9 - 123690457 catattttc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103633122 9 + 192599291 catattttc i rheMac3.chr2 C 0 I 319 s macFas5.chr2 103276883 9 - 192460366 catattttc i macFas5.chr2 I 321 C 0 s papAnu2.chr2 101070754 9 + 187378091 catatttTC i papAnu2.chr2 I 936 C 0 s chlSab2.chr15 4935180 9 + 91754291 catattttc i chlSab2.chr15 I 317 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=209980.000000 s hg38.chr3_KI270781v1_alt 57087 88 + 113034 taactatagtggattaagcttt-aaaaatccataacaaaaag-ataattcaaatatttccaattgcctggaaattaagcaatatactttt s panTro4.chr3 13806389 88 - 202329955 taactatagtggattaagcttt-aaaaatccataacaaaaag-ataattcaaatatttccaattgcctggaaattaagcaatatactttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13788914 88 - 202140232 taactatagtggattaagcttt-aaaaatccgtaacagaaag-ataattcaaatatttccaattgcctggaaattaagcaatatactttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14340253 88 - 123690457 taaccatagtggattaagcttt-aaaaatccacaacaaaaag-ataattcaaatatttccaattgcctagaaattaagcaatatactttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103633450 88 + 192599291 taactatagtggattaggcttt-aaaaatccataacaaaaag-ataattagaatatttccaattgcctggaaattaagcaatatactttt i rheMac3.chr2 I 319 C 0 s macFas5.chr2 103276892 88 - 192460366 taactatagtggattaggcttt-aaaaatccataacaaaaag-ataattagaatatttccaattgcctggaaattaagcaatatactttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101070763 90 + 187378091 TAACTATAGTGGATTAAGCTTTAAAAAATCCataacaaaaagaataattaGAATATTTCCAATTGCctggaaattaagcaatatactttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4935189 88 + 91754291 taactatagtggattaagactt-aaaaatccataacaaaaag-ataattagaatatttccaattgcctggaaattaagcaatatactttt i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92412743 5258 - 98464013 I a score=6553504.000000 s hg38.chr3_KI270781v1_alt 57175 2333 + 113034 aaataatctgtggatcaaagaagaaatacatcaaaaa-ttgtaaaatatttcagactgaatggtaatgaaaatataacataccaaaactta-cataa-ttcagctcaagcagcatttcgaggggaa-tgtagagcctggaatgcatatgtta-ggaaagaagaaaggctaaaaa-ccagtca-tctaag--tttccaactcaaaaactagtaac-agaatagctgtacaagagagaaaatagaaaatacatataagagcagaaatccatggaataaaaataagaggaagaagaataagaataagagggggaggaggaggaggaagagaaggaggaggaagaagaagaggaggaggaggcagaggaggaggaggaggaggaagaaga----agaccaacaaagccaagtgttcaatgaaaagattagtaagctct-tggtaacactgaccaagaaaaaaggaaaaaaaaata-catatacacata-aaagcaatgtcaggaataaaaaacgggaaatcactacagatcctacaaacattaagagataataagaggatattataaacaactttacaccagtatagtttgcactttggataaattagtcaactttctaaaaaaatttaccaaagctaacagaagaaataag-aattcaaaaagtGTGCTTTTTCAAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgagagactagtactggactagccttcttgccattggaaacaataaaaactagatgacatatataaataaaa---------tttttttcagatat-tgggcaacaggtagtacaaaa-ccgggatccctgtgaaaagagaaatccatgtgagatccatgttctagaccacagtacagaaaggcagagcccaagtacagcacagtgagctcattgagctgagaaggcagacatttgattttaagccttctgaggcagctgaaagttgtggggcaggataccgaaaagagagagttgcacagagaaggagctgcggaaa-tcgacataggattccccttaagtcttgagctaaatactcaa-----ctgagaatgc--agactcatttctgcgttcgtgtgcaaggcacggtagaggacagatgttagggagtcgggagctacacagagttctcacagtactgagagacacggaagttccaactagccagag-tagctgggcagta-cagaatttggtcaaaccttc-agaaagtccacatcttgggaa-tagagctattc-tctcctaaggttattcctagtaaaag--aaaggagtaatctcaatcagcccta-acatagcttaaaacaagcctc--------------aaaaaaaaaaaaatgctgatctaccagtaaattgattgcttgctaaaacaaaccccaacacattttaaaggaaaaccacataatcccaacaacacagcgtctataatgtaacacatacaatt---a-aaaaaaaatcactgaagaggtgaactagcagtaaaatgtaacacataatcagg-agaaaaaaa---------------agttgagaaaaacaaacc---------------aagaaatgttagagatgctggaattaacagacacagatcttaaaacatccattataaatatgttcaaatat-ggttaaggacttaaagggaaaagctgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatactctagaattagaaaatacagtatcag---aagtgaaacatttactgaatgagtttaagcgcagatcagacactgcaggaaaaaa-agtccataaatttgaagggaaggcaacagagctatccaaa-gtgaatcacggagagaaacaaaaagattgcaaagaagtgaacagagccttcgtgacctgtggg---acatt-aagcagtctaacatgcgtgtaactgaagtcccagt-aggggaggtgagacactgtggcagg-------aaaaaagtgtatttg-aagaaatataatgaaaaaatatcacca-cacagatccaagaagctcaaatactaaaaaccg-aagataagtaaaac-aattgtaaaagcggtcag-ag-aaaaatgaaacatcgaacgaaaaaaatgtttaggac--ggggtgctgtggctcacatctataattccagcattttgggaggctgaggcaggtggatcacttgagtccaggagtttcagtccagcctaggcaacat-ggcgaaaccctgtctctacaaaagatacaaaaattagctgggcctggtggcacatgcctgtagtcccagctactcaggaggctaattagggtgggaggattccttgagccctggaggtggaggtttcagtgagccaaaatcgtgcccctgcactccagtctgggc s panTro4.chr3 13806477 2334 - 202329955 aaataatctgtgggtcaaagaagaaatacatcaaaaa-ttgtaaaatatttcagactgaatggtaatgaaaatataacataccaaaactta-cataa-ttcagctcaagcagcatttcgaggggaa-tgtagagcctggaatgcatatgtta-ggaaagaagaaaggctaaaaa-ccagtca-tctaag--tttccaactcaaaaactagtaac-agaatagctgtacaagagagaaaatagaaaacacatataagagcagaaatccatggaataaaaataagaggaagaagaataagaatgagaggg---ggaggaggaggaagagaaggaggcggaagaagaagaggaggaggaggca---gaggagcaggaggaggaagaata----agaccaacaaagccaagtgctcagtgaaaagattagtaagctct-tggtaacactgatcaagaaaaaagg-aaaaaaaata-catatacacata-agagcaatgtcaggaataaaaaacgggaaatcactacagatcctacaaacattaagagataataagaggatattataaacacctttacaccagtatagtttgcactttggataaattagtcaactttctaataaaattcaccaaagctaacagaagaaataagaaattcaaaaagtGTGCTTTTTCAAAAGTTGTTCAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgagagactagtactggactagccttcttgccactggaaacaataaaaactagatgacatctataaataaaa---------tttttttcagatat-tgggcaacaggtaatacaaaa-ccgggatccctgtgaaaagagaaatccatgtgagatccatgttctagaccacagtacagaaaggcagagcccaagtacagcacagtgggctcattgagctgagaaggcagacatttgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaaagagagagttgcacagagaaggagctgcggaaa-tcgacataggattccccttaagtcttgagctaaatactcaa-----ctgagaatgc--agactcatttctgcgttcgtgtgcaaggcacggtagagaacagatgttacggagccgggagctacacagagttctcacagtactgagagacacagaagttccaactagccagag-tagctgggcagta-cagaatttgatcaaaccttc-agaaagtccacatcttgggaa-cagagctattc-tctcctaaggttattcctagtaaaag--aaaggagtaatctcaatcagcccta-acatagcttaaaacaagcctc-----------aaaaaaaaaaaaaaaatgctgatctaccagtaaattgattgcctgctaaaacaaaccccaacacattttaaaggaaaaccacataatcccaacaacacagcgtctataatgtaacacatacaatt--aa-aaaaaaaatcactgaagaggtgaagtagcagtaaaatgtaacacataatcagg-agaaaaaaa------------aagagttgagaaaaacaaacc---------------aagaaatgttagagatgctggaattaacagacacagatcttaaaacatccattataaatatgttcaaatat-ggctaaggacttaaagggaaaagctgaatatagtaaacaaatggggaaactgattagataaatggaaactacggaaaaggacaaaatggatactctggaattagaaaatacagtatcag---aagtgaaacatttactgaatgagtttaagcgcagatcagacactgcaggaaaaaa-agtccataaatttgaagggaaggcaacagagctatccaaa-gtgaatcacggagagaaacaaaaagattgcaaagaagtgaacagagccttcgtgacctgtggg---acatt-aagcagtctaacatgcgtgtaactgaagtcccagt-aggggagatgagacactgtggcagg-------aaaaaagtgtatttg-aagaaatataatgaaaaaatatcacca-cacagatccaagaagctcaaatactaaaaaccg-aagataagtaaaac-aattgtaaaagcggtcag-ag-aaaaatgaaacatcgaacgaaaaaaatgtttaggac--gggttgctgtggctcacacctataattccagcattttgggaggctgaggcaggtggatcacttgagtccaggagtttgagaccagcctaggcaacat-ggcgaaaccctgtctctacaaaagatacaaaaattagctgggcctggtggcacatgcctgtagtcccagctactcaggaggctaattagggttggaggattccttgagccctggaggtggaggtttcagtgagccaaaatcgtgcccctgcactccagtctgggc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13789002 2372 - 202140232 aaataatctgtgggtcaaagaagaaatacataaaaaatttgtaaaatatttcagactgaatggtaatgaagatataacataccaaaacttaccataatttcagctaaagcagcatttcgagggtaattgtagagcctggaatgcatatgttacggaaagaagaaaggctaaaaatccagtcattctaaggtttcccaactcaaaaactagtaacaagaatagctgtacaagagagaaaatagaaaatacatataagagcagaaattcatggaataagaataagagaaagaagaataagaataagagggtgaggaggaggaggaagaga--gaggaggaggaagaagaggaggaggaggcagaagaggaggaggaggaggaggaagaagagagaccaacaaagctaagtgttcaatgaaaagattagtaagctctctcgtaacgctgatcaagaaaaaatggaaaaaaaata-catatacacatacagagcaatgtcaggaataaaaaacgggaaatcactacagatcctacaaacattaagagataataagaggatattataaacaactttacaccagtacagtttgcacttcatataaattagtcaactttctaataaaatttaccaaagctaacAGAAG-ATTAAGAAATTCAAAAAGTGTGCTTTTTCGAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgagagactagtactggactagccttcttgccattagaaacaataaaaactagatgacatatataaataaaa---------attttttcagatat-tgggcaacaggtagtacaaaacccaggatccctgtgaaaagagaaatccatgtgagatccatgttcaagaccacagtacagaaaggcagagcccaagtacagcacagtgggctcattgagctgagaaggcagacatttgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaaagagagagctgcacagagaaggcgctccggaaattcgacataggattcccattaagtcttgagctaaatactcaa-----ctgagaatgc--agactcatttctgcattcgtgtgcaaggcacggtagagaacagatattagggagccgggagctacacagaggtctcacagtactgagagacacggaagttccaactagccagagctagctcagcagtaccagaatttggtcaaaccttcnagaaagtccacatcttaggaaccagagctattcttctcctaaggttattcctagtaaaagnaaaggaattaatctaaatcagccctatacatagcttaaaacaagcctc--------------aaaaaaaaaaaaatgctgatctaccagtaaattgattgcctgctaaaacaaaccccaacacattttaaaggaaaaccacataatcccaacaacacagcatctacaatgtaacacatacaattaaaa-aaaaaaaatcactgaagaggtgaagtagtagtaaaatgtaacacataatcagg-aaaaaaaaa------------aagagttgagaaaaacaaacc---------------aagaaatgttagagatgttggaattaacagacacagatcttaaaacatccattataaatatgtttaaatatcgtttaaggacttaaagggaaaaactgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatattctagaattagaaaatacagtatcag---aagtgaaaaatttactgaatgagtttaagggtggatcagacactgcaggaaaaaacagtccatgaatttgaagggaaagcaacagagctatccaaatgagaatcacagagag----aaaaagattgcaaagacgtgaacagagccttggtgacctgtggg---acattaaagtagtctaacatgtgtgtaactgaagtcccagtaaggggaggtgagacactgtggcagg-------aaaatagtgtatttgtaagaaatataatgaaaaaatatcaccaccacagatccaagaagctcaaatactaaaaaccgaaagataagtaaaactaattgtaaaagcggtcagaag-aaaaatgaaacactgaatgaaaaaaatgtttaggacagggggtgctgtggctaacacctataattctagcattttgggaagctgaggcagggggatcacttgagtccaggagtttgagaccagcctaggcaacatgggcgaaaccctgtctctacaaaagatacaaaaattagctgggcctcgtggcacctgcctgtagtcccagctactctggaggttaattagggtgggaggattccttgagccctggaggtagaggtttcagtgagcaaaaatcgtgcccctgcactccagtctgggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14340341 2348 - 123690457 aaataatctgtgggtcaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaaccgaatggtaatgaagatataacataccaaaactta-cataa-ttcagctaaagcagcatttcgaggggaa-tatagagcctggaatgcatatatta-ggaaagaagaaaggctaaaaa-ccagtca-tctaag--tttccaactcaaaaactagtaac-agaatagctgtacaagagagaaaatagaaaatacatataagagcagaaatccatggaataagaataagaggaagaagaataagaataagagggtgaggaggaggaggaagaaaagtaggaggaagaagaagaggaggaggaggcagaggaggatgaggaggaggaggaagaaga-agaccaacaaagccaagtgttcaatgaaaagattagtaagctct-tggtaacactgatcaagaaaaaaggaaaaaaatata-tatatacacata-agagcaatgtcaggaataaaaaatgggaaatcactacagatcctacaaacattaagagataataagaggatattataaacaactttacaccagtatagtttgcactttggataaattagtcaactttctaataaaatttaccaaagctaacagaagaaataagaaattcaaaaagtGTGCTTTTTCAAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAATGGTTCTAGACATGAGACACTAGTactggactagccttcttgccattagaaac---aaaaactagatgacatatataaataaat---------tttttttcagatat-tgggcaacaggtagtacaaaa-ccgggatccctgtgaaaagagaaatccatgtgagattcatgttctagaccacagtacagaaaggcagagcccaagtacagcacagtgggctcattgagctgagaaggcagacatttgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaaagagagagctgcacagagaaggagctccggaaa-tcgacataggattccccttaagtcttcagctaaatactcag-----ctgagaatgc--agactcatttctgcgttcgtgtgcaaggcacggtagagaacagatattagggagccgggagctacacagaggtctcacagtactgagagacacggaagttccaactagccagag-tagctgagcagta-cagaatttggtcaaaccttc-agaaagtccacgtctttggaa-tagagctattc-tctcctaaggttattcctagtaaaag--aaaggagtaatctaaatcagcccta-acatagcttaaaacaagcctc---------aaaaaaaaaaaaaaaaaatgctgatctaccagtaaattgactgcctgctaaaacaaaccccaacacattttaaaggaatatcacataatcccaacaacacagcatctacaatt---cacatacaatt-aaa-aaaaaaaatcactgaagaggtgaagtagcagtaaaatgtaacccataatcagg-aaaaaaaaaaaaa--------aagagttgagaaaaacaaacc---------------aagaaatgttagagatgttggaattaacagacacagatcttaaaacatccattataaatatgtttaaatat-gtttaaggacttaaagggaaaagccgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatattctagaattagaaaatacagtatcag---aagtgaaaaatttactgaatgagtttaagggcagatcagacgctgcaggaaaaaa-agtccatgaatttgaagggaaagcaacagaattatccaaa-gtgaatcacagagagaaacaaaaagattgcaaagaagtgaacagaaacttggtgacctgtgggacaacatt-aagcagtctaatatgtgtgtaactgaagtcccagt-aggggaggtgagacactgtggcagg-------aaaaaagtgtatttg-aagaaatataatgaaaaaatatcacca-cacagatccaagaagctcaaacactaaaaaccg-aagataagtaaaac-aattgtaaaagcggtcag-ag-aaaaatgaaacattgaatgaaaaaaatgtttaggac--ggggtgctgtggctcacacctataattccagcattttgggaagctgaggcaagtggatcacttgagtctgggagtttgagaccagcctaagcaacat-ggcgaaaccctgtctttacaaaagatacaaaaattagctgaggctggtggcacatgcctgtagtcccagctactcaggaggctaattattgtgggaggattccttgagccctggagatagaggtttcagtgagccaaaatcgtgcccctgcactccagtctgggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103633538 2335 + 192599291 aaataatctatgggttaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaactgaatgataatgaagatgtaacataccaaaactta-cataa-ttcagctaaagcagcatatcgaggggaa-tgtagagcctggaatgcatatatta-ggaaagaagaaaggctaaaaa-ccagtca-tctaag--tttccaactcaaaaactactaac-agaatagctgtacaagagagaaaatagaaaatacatacaagaccagaaatccatggaataagaataagaggaagaagaataagaataagaggg---ggaggaggaggaggaggaggaagaaaaataagaagaggagaagg---------------aagaggaagaagaaga------acaaagaaagccaaatattcaatgaaaagattagtaagctct-tggtaacactgatcaagaaaaaaag-aaaaaaaata-catatacaacta-agagcaacgtcaggaataaaaaacaggaaatcactacagatcctacaaacatttagagataataagaggatattataaacaactttataccagtatagtttgcactttggataaattaggcaactttctaataaaatttaccaaagctaacagaagaaataagaaatttgaaaagtGTGCTTTTTCAAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgatagactagtactggactagccttcttgccattagaaacaattaaaactagatgacatatagaaataaag--------ttttttttcagatat-tgggcaacaggtagtgcagaa-ccatgatccctgtgaaaagtgaaatccatgtgagatccatgttctagatgacagtacaggaaggcagagcccaagcagagcacggtgggctcattgggctgagaaggcagacatctgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaa--agagagttgcacagagaaggagctccggaaa-tcgacataggagtccccttaagtcttgagctaaatactcaa-----cggagaatgc--agactcatttctgcattcgtgtgcaaggcacggtagagaacaaatattagggagccgggagctgcacaaaggtctcacacgactg---------ggagttccaaccagccagag-tagctgagcagta-cagaatttggtcaaaccttc-agaaagtccacgtctcaggaa-tagagctactc-tctcctaagattattcctagtaaaag--aaaggaataatctaaattggctcta-acatagtttaaaacaagcctaaaaacaaacaaaacaaaacaaaaaacaagctgatctaccagtaaat----tgcctgctaaaataaaccccaacaccttttaaaggaaaaccacataattccaacaacacagcatctacaatgtagcatttacaatt---t-aaaaaaaatcactgaagaggtgaagtaacagtaaaatgtaacccacaatcagg-ggaaaaaaaaaaaaaaaaa--aagggttgaggaaaacaaacc---------------aagaaatgttagagatgttggaattaacagacacagatcttaaaacatccattataaatatgtttaaatat-gtttaaggacttaaagggaaaagctgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatattctagaattggaaaatacagtatcag---aagtgaaaaatttactgaatgagtttaagggcagatcaaacactgcaggaaaaaa-tgtccatgaatttgaagggaaagcaacagaactatccaaa-gtgaatctcagagagaaacaaaaagattgagaagaagtgaa-agagccttggtgacctgtgggacaacatt-aagaagtctaacatgtatgtaactgaagtcccagt-acaggaggtgagactccgtggcaggaaaaaaaaaaaaagtacatttg-aagaaatacaatgaaaaaatatcacct-cacagatccaagaagctcaaatactaaaacccg-aagataagtaaaac-aattgtaaaagcggtcag-ag-aaaaatgaaacattgaatgaaaaaaatgtttaggac--agggtgctgtggctcacacctataattccagcattttgggaggctgaggcaagtggatcacttgagtccaggagcttgagaccagcctaggcaacat-ggtgaaaccctgtctctacaaaagatacaaaaattagctgggcttggtggcacatgcctatagtcccagctactcaggaggctaattggggtgggaggattccttgagctctggaggtagaggtttcagtgagccaaaatcgtgcccctgcactccagtctggac i rheMac3.chr2 C 0 I 18 s macFas5.chr2 103276980 2335 - 192460366 aaataatctatgggttaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaactgaatgataatgaagatgtaacataccaaaactta-cataa-ttcagctaaagcagcatatcgaggggaa-tgtagagcctggaatgcatatatta-ggaaagaagaaaggctaaaaa-ccagtca-tctagg--tttccaactcaaaaactactaac-agaatagctgtacaagagagaaaatagaaaatacatacaagaccagaaatccatggaataagaataagaggaagaagaataagaataagaggg---ggaggaggaggaggaggaggaagaaaaagaagaagaggagaagg---------------aagaggaagaagaaga------acaaataaagccaaatattcaatgaaaagattagtaagctct-tggtaacactgatcaagaaaaaaag-aaaaaaaata-catatacaacta-agagcaacgtcaggaataaaaaacaggaaatcactacagatcctacaaacatttagagataataagaggatattataaacaactttataccagtatagtttgcactttggataaattaggcaactttctaataaaatttaccaaagctaacagaagaaataagaaatttgaaaagtGTGCTTTTTCAAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgatagactagtactggactagccttcttgccattagaaacaattaaaactagatgacatatagaaataaag--------ttttttttcagatat-tgggcaacaggtagtgcagaa-ccatgatccctgtgaaaagtgaaatccatgtgagatccatgttctagatgacagtacaggaaggcagagcccaagcagagcacggtgggctcattgggctgagaaggcagacatctgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaa--agagagttgcacagagaaggagctccggaaa-tcggcataggagtccccttaagtcttgagctaaatactCAA-----CTGAGAATGC--AGACTCATTTCTGCATTCGTGTGCAAGGCACGGTAGACAACAAATATTAGGGAGCCGGGAGCTGCACAAAGGTCTCACACGACTG---------GGAGTTCCAACTAGCCAGAG-TAGCTGAGCAGTA-CAGAATTTGGTCAAACCTTC-AGAAAGTCCACGTCTCAGGAA-TAGAGCTACTC-TCTCCTAAGATTATTCCTAGTAAAAG--AAAGGAATAATCTAAATTGGCTCTA-ACATAGTTTAAAACAAGCCTAAAAACAAACaaaacaaaacaaaaaacaagctgatctaccaataaat----tgcctgctaaaataaaccccaacaccttttaaaggaaaaccacataattccaacaacacagcatctacaatgtagcatttacaatt---t-aaaaaaaatcactgaagaggtgaagtaacagtaaaatgtaacccacaatcaggaaaaaaaaaaaaaaaaaaaa--aagggttgaggaaaacaaacc---------------aagaaatgttagagatgttggaattaacagacacagatcttaaaacatccattataaatatgtttaaatat-gtttaaggacttaaagggaaaagctgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatattctagaattggaaaatacagtatcag---aagtgaaaaatttactgaatgagtttaagggcagatcaaacactgcaggaaaaaa-tgtccatgaatttgaagggaaagcaacagaactatccaaa-gtgaatctcagagagaaacaaaaagattgagaagaagtgaa-agagccttggtgacctgtgggacaacatt-aagaagtctaacatgtatgtaactgaagtcccagt-acaggaggtgagacaccgtggcagg-aaaaaaaaaaaagtacatttg-aagaaatacaatgaaaaaatatcacct-cacagatccaagaagctcaaatactaaaacccg-aagataagtaaaac-aattgtaaaagcggtcag-ag-aaaaatgaaacattgaatgaaaaaaatgtttaggac--ggggtgctgtggctcacacctataattccagcattttgggaggctgaggcaagtggatcacttgagtccaggagcttgagaccagcctaggcaacat-ggtgaaaccctgtctctacaaaagatacaaaaattagctgggcttggtggcacatgcctatagtcccagctactcaggaggctaattggggtgggaggattccttgagctctggaggtagaggtttcagtgagccaaaatcgtgcccctgcactccagtctggac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101070853 2327 + 187378091 aaataatctatgggtcaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaactgaatGATAATGAAGAT-----ATACCAAAACTTA-CATAA-ttcagctaaagcagtatttcgAGGGGAA-TGTAGAGCCTGGAATGCAtatatta-ggaaagaagaaaggctaAAAA-CCAGTCA-TCTAAG--TTTCTAACTCAAAAACTACTAAC-AGAATAGCTGtacaagagagaaaatagaaaatacatacaagagcagaaatccatggaataagaataagaggaagaagaataagaataagaggg---ggagaaggaggaggaggaagaaaaagaagaagaagaggaggagg---------------aagaggaagaagaaga------acaaataaaGCCAAATAGTCAATGAAAAGATTAGTAAGCTCT-TGGTAacactgatcaagaaaaaaaa-gaaaaaaata-catatacaccta-AGAGCAACGTCAGGAATAAAAAACAGGAAATCACTACAGATCCTACAAACATTTATAGATAATAAGAggatattataaacaactttatacCAGTATAGTTTGCACTTTGGATAAATTAGGCAACTTTCTAATAAAATTTaccaaagctaacagaagaaataagaaattcaaaAAGTGTGCTTTTTCAAAAGTTGTACAGTagttggcattttaaaatttcttaacagTTCTAGACATGATAGACTAGTACTGGACTAGCCTTCTTGCCATTAGAAACAATTAAAACTAGATGACatatagaaataaag--------ttttttttcagatat-tgGGCAACAGGTAGTGCAGAA-CCATGATCCCTGTGAAAAGCGAAATCCATGTGAGATCCATGTTCTAGATGACAGTACAGAAAGGCAGAGCCCAAGTAGAGCACGGTGGGCTCATTGGGCTGAGAAGGCGGACATCTGATTTTAAGCCTTCTGAGGCAGCTGAAAGTTGTGGGGCAGGATACTGAAA--AGAGAGTTGCACAGAGAAGGAGCTCCGGAAA-TCAACATAGGAGTCCCCTTAAGTCTTGAGCTAAATACTCAA-----CTGAGAACGC--AGAATCATTTCTGCATTCGTGTGCAAGGCACGGTAGAGAACAAATATTAGGGAGCCGGGAGCTGCACAGAGGTCTCACACGACTG---------GGAGTT-CAACTAGCCAGAG-TAGCTGAGCAGTA-CAGAATTTGGTCAAACCTTC-AGAAAGTCCATGTCTCAGGAA-TAGAGCTACTC-TCTCCTAAGATTATTCCtaataaaag--aaaggaataatCTAAATTGGCTCTA-ACATAGTTTaaaacaagcctaaaaacaaacaaaacaaaacaaaaaccaagctgATCTACCAGTAAAT----TGCCTGCTAAAATAAACCCCAACACCTTTTAAAGGAAAACCACATAATTCCAACAACACAGCATCTACAATGTaacatttacaatt---t-aaaaaaaatcactgaagagGTGAAGTAACAGTAAAATGTAACCCAcaatcagg-ggaaaaaaaaaaaaaaaaaccaagggtTGAGGA----AAACC---------------AAGAAATGTTAGAGATGTTGGAATTAACAGACACAGATCTTAAAACatccattataaatatatttaaatat-gtttaaggaCTTAAAGGGAAAAGCTGAATATAGtaaacaaatggggaaactgattAGATAAATGGAAACTACAGAAAAGGACAAAATGGATATTCTAGAATTGGAAAATACAGTATCAG---AAGTGAAAAATTTACTGAACGAGTTTAAGGGCAGACCAAACACTGCAGGAAACAA-TGTCCATAAATTTGAAGGGAAAGCAACAGAACTATCCAAA-GTGAATCtcagagagaaacaaaaagattGAGAAGAAGTGAA-AGAGCCTTGGTGACCTGTGGGACAACATT-AAGCAGTCTAACGTGTATGTAACTGAAGTCCCAGT-ACAGGAAGTGAGACACCgtggcagg-aagaaaaaaaaagtacatttg-aagaaatacaatgaaaaaatatcacct-cacagatccaagaagctcaaataCTAAAACCCG-AAGATAAGTAAAAC-AATTGTAAAAGCggtcag-ag-aaaaatgaaacattgaatgaaaaaaatgtttaggac--agggtactgtggctcacatctataattccagcatttcgggaggctgaggcaggtggatcacttgagtccaggagcttgagaccagcctaggcaacat-ggtgaaaccctgtctctacaaaagatacaaaaattagctgggcctggtggcacatgcctatagtcccagctactcaggaggctaattggggtgggaggattccttgagctctggaggtagaggtttcagtgagccaaaatcgtgcccctgcactacagtctggac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4935277 2346 + 91754291 aaataatctatgggtcaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaactgaatgataatgaagatataacataccaaaactta-cataa-ttcagctaaagcagcatttcgaggggaa-tgtagagcctgaaatgcatatatta-ggaaagaagaaaggctaaaaa-ccagtca-tctaag--tttctaactcaaaaactactaac-agaatagctgtacaagaaagaaaatagaaaatacatacaagagcggaaatccatggaataagaataagaggaagaagaacaagaataagaggg---ggagaaggaggaggag---gaagaaaaagaagaagaggaggagg---------------aagaggaagaagaaga------acaaataaagccaaatattcaatgaaaagattagtaaactct-tggtaacactgatcaagaaaaaaag-agaaaaaaaaccatatacaccta-agagcaacgtcaggaataaaaaacaggaaatcactacagatcctacaaacatttagagataataagaggatattataaacaactttataccagtatagtttgcactttggataaattaggcaactttctaataaaatttaccaaagctaacagaagaaataagaaattcgaaaagtGTGCTTTTTCAAAAGTTGTACAGTAGTTGGCA-TTTAAAATTTCTTAACAGttctagacatgatagactagtactggactagccttcttgccattagaaacaattaaaactagatgacatatagaaataaag-------tttttttttcagatat-tgggcaacaggtagtgcagaa-ccatgatccctgtgaaaagcgaaatccatgtgagatccatgttctagatgacagtacagaaaggcagagcccaagtagagcacggtgggctcattgggctgagaaggcagacatctgattttaagccttctgaggcagctgaaagttgtggggcaggatactgaaa--agagagttgcacagagaaggagctccggaaa-ttgacataggagtccccttaagtcttgagctgaatactCAA-----CTGAGAATGC--AGACTCATTTCTGCATTCGTGTGCAAGGCACGGTAGAGAACAAATATTAGGGAGCCGGGAGCTGCACAAAGGTCTCACACGACTG---------GGAGTTCCAACTAGCCAGAG-TAGCTGAGCAGTA-CAGAATTTGGTCAAACCTTC-AGAAAGTCCACGTCTCAGAAA-TAGAGCTACTC-TCTCCTAAGATTATTCCTAGTAAAAG--AAAGGAATAATCTAAATTGGCTCTA-ACATAGTTTAAAACAAGCCTAAAAACAAACaaaacaaaacaaaaaacaagctgatctaccagtaaat----tgcctgctaaaataaaccccaacaccttttaaaggaaaaccacataattccaacaacacagcatctacaatgtaacatttacaatt---taaaaaaaaatcactgaagaggtgaagtaacagtaaaatgtaacccacaatcagg-gggaaaaaaaaaaaaa-----aagggttgaggaaaacaagccaaaagggttgagaaaaaaaagggttagagatgttggaattaacagacacagatcttaaaacatccattataaatatgtttaaatat-gtttaaggacttaaagggaaaagctgaatatagtaaacaaatggggaaactgattagataaatggaaactatggaaaaggacaaaatggatattctagaattggaaaatacagtatcag---aagtgaaaaatttactgaatgagtttaagggcagatcaaacactgcaggaaaaaa-tgtccatgaatttgaagggaaagcaacagaactatccaaa-gtgaatctcagagagaaacaaaaaaattgagaagaagtgaa-agagccttggtgacctgtgggacaacatt-aagcagtctaacatgtatgtaactgaagtcccagt-acaggaggtgagacaccgtggcaggaaaagaaaaaaaagtacatttg-aagaaatacaatgaaaaaatatcacct-cacagatccaagaagctcaaatactaaaacccg-aagataagtaaaac-aattggaaaagcggtcag-ag-aaaaatgaaacattgaatgaaaaaaa-gtttaggac--ggggtgctgtggctcacacctataattccagcattttgggaggctgaggcaagtggatcacttgagtccaggagcttgagaccagcctgggcaacat-ggtgaaaccctgtctctacaaaagatacaaaaattagctgggcctggtggcacatgcctatagtcccagctactcaggaggctaattggggtgggaggattccttgagctctggaggtagaggtttcagtgagccaaaatcatgcccctgcactccagtctggac i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92418001 2287 - 98464013 aaaaaaTctatgggtcaaagaagaaatacatcaaaaa-ttgtaaaatatttcaaactgaatgataatggagatgtaacatagcaaaactta-cataa-ttcagttaaagcagcatttcaaagggaa-tgtagagcctggaatgcgcatatta-ggaaagaagaaaggccaaaaa-ccagcca-tctaag--tttccaactcaaaaactagtaac-agaatagccgtacaagagagaagacagaaaatacatacaagagcagagatcaatgg---------------aggaagaacaagcataaaagga---ggaggaggaagaag-----gaggaggaggaggaggaggaggagg---------------aggagaaagaagaaaa--gaaaagcaacaaagccaagtgtttgatgaaaagattagtaaactct-tggtaacactaatcaagaaaaagag-aaaaaaa----tatatacacata-agagcaatgagaggaataaaaaggggaaaataactacagaccctacaaacattaagagctaataagaggatattgtaaacaactttacaccaatatagtttgcactttgaataaattaggcaactttctgacaaaatttaccaaagctaacagaagaaattagaaattcaaaaa--gtgctTTTTCAAAAGTTGTTCAGTAGTTGGCA-TTTAAAACTTCTTGATGGTTCTAGACATGATAGACTAGTACTGGACTAGACTTCTTGTCATTAAAAACGGTAAAAACTAGATGACATATGCAAATAAAGGTTTTTTTTTTTTTTTTACCTCTATTGGCAACAGGTAGTACAGGA-CTGTGATCCCTGTGAGAAGAG-AATCCGTGTGGGATCCGTGCActagaccgtagtacacaaaggcagagcccaagtagagcgcggcgagctcactgagctgagaagacagatatttgattttaagccttctaaagca-ttgaaatttgtggggcaggatactgaaaa-agagagttgaacggagaaggagctccagaaa-tcaacataggagtccccttaagtcttgagctaaatactcaagcgatcagagaatacagagactcatctctgcatttatgtgcaaggcacggtagagaacagacattggggagccaggagttgcacagaggtcccacagtactggcagacacagaaggtccaactagccaggg-tagctgagcagta-cagaatttggtcaaacctcc-agaaagtccacgtcttaggaa-tagagcgattc-tctcctaggattattcctagcaaaag--aaa-aaataatctaaatcagcccta-acatagcttaaaacaagtttt---------aaaaaaaaaaaaccaacaagataatctactagtaaattgattacttgctaaaacaaaccccaacaccttttaaaggtaaaccacataatcctagtaacacagcatctacaatgtaacacatacaatt--tt-ttaaaaagtcactgaagaggtgaagtagcagtaaaatgtagcccataatcaga-aaaaaaaaaa-----------aagagttgaggaaaacaaacc---------------aagaaatgatagagatgttggaattcacagacacagatctgaaaacatccattacaaatatgtttaa------------gatttaaagggaaaagctgaataaagtaaacaaatgaggaaactgattaaattaatggaaactatggaaaaggacaaaatggatattctagaattggaaaatacagtatgagtttaagggcaga---tactgaatgagtttaagggcagatcagacaatgcagaaaaaaa--gtccatgaatttgaaaggaaagcaacagaactatccaaa-gtaa-------gaagaaacaaaaagactgcaaacaaatgaacagggccttagtgccctgtgggacaacatt-aggcagcctaacgtgta--taactgaagccccagt-agaacaggtgagacactgtggcaga-------aaaaaagtctatctg-aagaaatataacgaaaaaatatcacct-cacagatccaagaaactcaaatgctaaaaacca-aagataaataaaaa-tattgtaaaagcgatcag-agaaaaaatgaaacatttaatgaaaaaaatgtttaggac--tgggtgctgtggctcgtgcctataatcccagcattctgggaggccgaggcaggtggatcacttgagtccaggagcttgagaccagcccgggcaacat-ggcgaaaccctgtctctacaaaatatacaaaaattagctgggtgtggtggcacatgcctgtagtcccagctactcagaaggctaattagaaagggaggattccttgaaccctggaggta-----------gagccaaaaccatgccactgcactctagtctgggc i calJac3.chr15 I 5258 C 0 e canFam3.chr34 24784771 16718 - 42124431 I a score=28830.000000 s hg38.chr3_KI270781v1_alt 59508 18 + 113034 tggagtgagactctgtct s panTro4.chr3 13808811 18 - 202329955 tggagtgagactctgtct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13791374 18 - 202140232 tggagtgagactctgtct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14342689 18 - 123690457 tggagtgagactctgtct i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103279315 16 - 192460366 tggagtgagacTATCT-- i macFas5.chr2 C 0 I 7 s papAnu2.chr2 101073180 16 + 187378091 tggagtgagactatct-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4937623 16 + 91754291 tggagtgagactatct-- i chlSab2.chr15 C 0 I 3 s calJac3.chr15 92420288 18 - 98464013 tggagtgagtctctgcct i calJac3.chr15 C 0 I 2 e rheMac3.chr2 103635873 18 + 192599291 I e canFam3.chr34 24784771 16718 - 42124431 I a score=2461797.000000 s hg38.chr3_KI270781v1_alt 59526 836 + 113034 c------aaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcatcat-aaataatgccaa----gaaacaatgg---aacatcttcaaa-gtaccaaa-ggctgagtggagactgccaacctataacc-tatttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggctgattctaggactaggatatggaaagtacaaga--tgagtctagaacatcttgtagagccagaaagtGctgatcaatgtagagggagtggttaaatttgaaaaccatcattttacaaccagcaggatatggcctaggtcaggaaaatgggtgataaatcaacagtacaaagtttgacgaagagcagaatatctacatagtcttaacatttct-ccccccaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcaccttgactgggtagtcaaaatcaacatcagccatgaaaagcaggcggacatgtgggtccctgagtgtgctgccctgaaaaggatgcagctttatgcatgtgatgttgctgctgacagtgcacaggcgggatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAATTAACTAGGAAGTGTTCTTTAGaaaaatgccgaacctgctttatacaattagataaatccagagtgtagaaatttccacaagagagctagcctgagctcttcagaaatgtaatgacat-aaaaaaccacc-aaaatattggtaaggggcaggggaaggggactgttctaggttaaaaaagagtaaggaa s panTro4.chr3 13808829 838 - 202329955 c-----aaaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcatcat-aaataatgccaa----gaaacaatgg---aacatcttcaaa-gtaccaaa-ggctgagtggggactgccaacctataatc-tacttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggctgattctaggactaggatatggaaagtacaaga--tgagcctagaacatcttgtagaaccagaaagtGctgatcaatgtagagggagtggttaaacttgaaaaccatcattttacaaccagcaggatatggcctaggtcaggaaaatgggtgataaatcaacagtacaaagtttgacgaagagcagaatatctacatagtcttaacatttct-ccccccaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcaccttgactgggtagtcaaaatcaacatcagccatgaaaagcaggcggacatgtgggtccctgagtgtgctgccctgaaaaggatgcagctttatgcatgtgatgttgctgctgacagtgcacaggcgggatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAATTAACTAGGAAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTATACAAGTagataaatccagagtgtagaaatttccacaggagagctagcctgagctcttcagaaatgtaatgacataaaaaaaccacc-aaaatattggtaaggggcaggggaaggggactgttctaggttaaaaaagagtaaggaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13791392 848 - 202140232 c-------aaaaaaaaaaaaaaaaagtttaatgaaaacccacgacaaaaacactgacctcatcataaaataatgccag----gaaacaatggaacaacatcttcaaaggtaccaaagggctgagtggggactgccaacctataaacgtatttaatatccagtgaaagtatcctcccaataataaaggCAAccacttcaaagaaccaggggattcttggagaagtggctgattctaggactaggatatggaaagtacaaga--tgagcctagaacatcttgtagagccagaaagtGctgatcaatgtagagggagtggttaaatttgaaaaccatcattttacaatcagcaggatacggcctaggtcaggaaaatgggtgataaatcaataggacaaagtttgacgaagagcggaatatctgcagagtcttaacatttct-ccccccaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcaccttgactgggtagtcaaaatcaacatcagccatgaaaagcaggcggacatgtgggtccctgagtgtgctgccctgcaaaggatgcggctttatgcatgtgatgttgctgctgacagtgcacaggcgggatctaatcacgaggaagcacctgcttcctgatgtcacgccatcttaaaattaactaggaagtgttctttagaaaaataccgaacctgctttacacaattagataaatccagagtgtagaaatttccacaagagagctagcctgagctcttcagaaacgtaatgacat-aaaaaaccaccaaaaatattggtaaggggcaggggaaggggactgttctaggttaaaagagagtaaggaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14342707 845 - 123690457 caaaaaaaaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcatcat-aaataatgccaa----gaaacaatggaacaacatcttcaaa-gtaccaaa-ggctgagtggggactgccaacctataacc-tatttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggctgattctaggaccagaatatgggaagtacaaga--tgagcctagaacatcttgtagagccagaaagtGctgatcaatgtagagggagtggttaaatttgaaaaccatcattttacaacccgcaggatacggcctaggtcaggaaaatgggtgataaatcaataggacaaagtttgacgaagagcagaatatctacatagtctgaacatttct-cctcccaaatggc-ttattagctgcaagggaaaaataagtggataaagcatgcagcaccttgactgggtagtcaaaatcaacatcagccatgaaaagcaggaggacatgtgggtccttgagtgcgctgccctgaataggatgtggctttatgcatgtgatgttgctgctgacagtgcacaggcgggatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAATTAACTAGGAAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTACACAattagataaatccagagtgtagaaatttccacaagagagctagcctgagctcttcagaaatgtaatgacat-aaaaaaccacc-aaaatattggtaaggggcaggggaaggggactgttctaggttaaaagagagtaaggaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103635891 833 + 192599291 ------aaaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcctcat-aaataatgccaa----gaaacaatggagcaccatcttcaaa-gtaccaaa-ggctgagtggggactgccaacctataacc-tatttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggct-attctaggactaggatatggaaagtacaaga--tgagcctagaacatctcatagagtcagaaagtGctgatgaatgcagagggagtggttaaatttgaaaatcatcattttacaaccagcaggataaggcctaggtcaggaaaatgggagataaatcaacaggacaaagtttgacgacgagcagaatatttacgtagtcttaacatttct-ccccgcaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcactttgactgggtaatcaagatcaacatcacccgtgaagggcgggtggacatgtaggtccctgagtgtgctgccctgaaaaggatgtggctttatgcatgtgatgttgctgctcacagtgcacaggcagaatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAAT----TAGGGAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTACAAaattagacaaatccagagtgtagaaatttccacaagagagctagcctgagttcttcagaaaagaaatgacat-aaaaaaccacc-aaaatattggtaagggtc-ggggaagggggctgttctaggttaaaagagagtaaggaa i rheMac3.chr2 I 18 C 0 s macFas5.chr2 103279338 833 - 192460366 ------aaaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcctcat-aaataatgccaa----gaaacaatggcgcaccatcttcaaa-gtaccaaa-ggctgagtggggactgccaacctataacc-tatttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggct-attctaggactaggatatggaaagtacaaga--tgagcctagaacatctcatagagtcagaaagtGctgatgaatgcagagggagtggttaaatttgaaaatcatcattttacaaccagcaggataaggcctaggtcaggaaaatgggagataaatcaacaggacaaagtttgacgacgagcagaatatttacgtagtcttaacatttct-ccccgcaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcactttgactgggtaatcaagatcaacatcacccgtgaagggcgggtggacatgtaggtccctgagtgtgctgccctgaaaaggatgtggctttatgcatgtgatgttgctgctcacagtgcacaggcagaatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAAT----TAGGGAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTACaaaattagacaaatccagagtgtagaaatttccacaagagagctagcctgagttcttcagaaaagaaatgacat-aaaaaaccacc-aaaatattggtaagggtc-ggggaagggggctgttctaggttaaaagagagtaaggaa i macFas5.chr2 I 7 C 0 s papAnu2.chr2 101073196 837 + 187378091 ------caaaaaaaaaaaaaaaaaagtttaatgaaa--cCACGAC-AAAACACTGACCTCCTCAT-AAATAATGCCAA----GAAACAATGGAGCACCATCTTCAAA-GTACCAAA-GGCTGAGTGGGGACTGCCAACCTATAACC-TATTTAATATCCAGTGAAAGTATCCT-CCAAAAATAAAGGCAACCACTTCAAGGAACCA-GGGATTCTTGGAGAAGTGGCT-ATTCTAGGACTAGGATATGGAAAGTACAAGATTTGAGCCTAGAACATCTCGTAGAGTCAGAAAGTGCTGATGAATGCAGAGGGAGTGGTTAAATTTGAAAATCATCATTTTACAACCAGTAGGATAAGGCCTAGGTCAGGAAAATGGGAGATAAATCAACAGGACAAAGTTTGACGATGAGCAGAATATTTACGTAGTCTTAACATTTCTCCCCCGCAAATGGC-TTATTAGTTGCAAGGGAAAAATAAGTGGATAAAGCAGGCAGCACTTTGACTGGGTAATCAAGATCAACATCACCCGTGAAGGGCGGGTGGACATGTAGGTCCCTGAGTGTGCTGCCCTGAAAAGGATGTGGCTTTATGCATGTGATGTTGCTGCTCACAGTGCACAGGCGGAATCTAATCACGAGGAAGCACCTGCTTCCTGATGTCACGCCATCTTAAAAT----TAGGGAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTACAAAATTAGACAAATCCAGAGTGTAGAAATTTCCACAAGAGTGCTAGCCTGAGttcttcagaaaagaaatgacaT-AAAAAACCACC-AAAATATTGGTAAGGGTCAGGGGAAGGAGGCTGTTCTAGGTTAAAAGAGAGTAAGGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4937642 833 + 91754291 ------aaaaaaaaaaaaaaaaaaagtttaatgaaa--ccacgac-aaaacactgacctcctcat-aaataatgccaa----gaaacaatggagcaccatcttcaaa-gtaccaaa-ggctgagtggggactgccaacctataacc-tgtttaatatccagtgaaagtatcct-ccaataataaaggcaaccacttcaaagaacca-gggattcttggagaagtggct-attctaggactaggatatggaaagtacaaga--tgagcctagaacatctcgtagagtcagaaagtGctgatgaatgcagaggaagtggttaaatttgaaaatcatcattttacaaccagcaggataaggcctaggtcaggaaaatgggagataaatcaacaggacaaagtttgatgatgagcagaatatttacgtagtcttaacatttct-ccccccaaatggc-ttattagttgcaagggaaaaataagtggataaagcaggcagcactttgactgggtaatcaagatcaacatcacccgtgaagagcgggtggacatgtaggtccctgagtgtgctgccctgaaaaggatgtggctttatgcatgtgatattgctgctcacagtgcacagacggaatctaatcacgaggaagcaccTGCTTCCTGATGTCACGCCATCTTAAAAT----TAGGGAGTGTTCTTTAGAAAAATGCCGAACCTGCTTTACAAaattagacaaatccagagggtagaaatttccacaagagagctagcctgagttc-acagaaaagaaatgacat-aaaaaaccacc-aaaatattggtaaggggcaggggaagggggctgttctaggttaaaagagagtaaggaa i chlSab2.chr15 I 3 C 0 s calJac3.chr15 92420308 834 - 98464013 ------aaaaaaaaaaaaaaaaaaagtttaataaaa--ccatgac-agcacactgacttcatcat-atataatgccaaccaggaaacaatggaacagcatcttcaaa-gtaccaa--ggctgagtggggactgccagcctgtatct-aatttaatatccagtgaaagtatcct-ccagtaataaaggcaaccacttcaaagaacta-gggattcttggagaagtggctgattctaggactcagatatggaaagtacta----tgagcctagaacatcttgtagagccagaaagtGctgataaatgcagagggagtggttagatttgaaaaccaccattttacaaccatcaggataaggcctaggtcgggaaaatgggtgataaatcaacgggataaagtttgatgatgagtagagtatttacagagtcc-aatttttct-caccccaaatggctttattagttgcaagggaaaaataagtggataaagcagactgcacgttgactgggtaatcaagatcagtatcacccgtgaagagcgcgtggacacgtgagtccctgagtgtacggctctgaaaaagatg--gcatcatgcaggtgctgtttctgctgacagtgcgcaggcggaatctaatcacgaggaCGC-TCTGCTTCCTGATATCACGCCATCTTAAAAT----TAGCCAgtgttctttagaaaaatgccgaacctgcttaacacagttagataaatccagagtgtagaaatttccgcaagacagccagactgagctcttcagaaaagcaatgtcataaaaaaaccacc-aaaacattggtaagagccaggggaagggggctgttctaggtcaaaggagagtaagaaa i calJac3.chr15 I 2 I 24 e canFam3.chr34 24784771 16718 - 42124431 I a score=418194.000000 s hg38.chr3_KI270781v1_alt 60362 176 + 113034 acataatcgcgaactataatatgt-actcttgattggttccaggatctgaaacaaatgctattaaagtaacagtgggcacaaatgaggaacttaaatatgaattgtatattagaaaatattcttcagccgggcacggaggctcacgcctgtaatcctagcaccttgggaggccgagg s panTro4.chr3 13809667 176 - 202329955 acataatcgcgaactataatatgt-actcttgattggttccaggatctgaaacaaatgctattaaagtaacagtgggcacaaatgaggaacttaaatatgaattgtatattagaaaatattcttcagccgggcacggaggctcgcgcctgtaatcctagcaccttgggaggccgagg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13792240 176 - 202140232 acataatcactaactataatatgt-actcttgattggttccaggatctgaaacaaatgctattaaagtaacagtgggcacaaatcaggaacttaaatatgaattgtatatcagaaaatattcttcggctgggcatggaggctcacgcctgtaatcctagcactttgggaggccgagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14343552 176 - 123690457 acataatcactaactataatatgt-actcttgattggttccaggatctgaaacaaatgctattaaagtaacagtgggcacaaatgaggaagttaaatatgaattgtatattagaaaatattcttcagccaggcacagaggctcacgcctgtaatcctagcactttgggaggccgagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103636724 177 + 192599291 agataatcactaactataatatgtgactcttgattggttccagaatccaaaacaaatgctattaaagtaacagtgggcacaaatgaggaacttaaatatgaattgtatgttagaaaatattTTTCAgccgggcgcagaggctcacgcctgtaatcccagcactttgggaggctgagg i rheMac3.chr2 C 0 I 655 s macFas5.chr2 103280171 177 - 192460366 agataatcactaactataatatgtgactcttgattggttccagaatccaaaacaaatgctattaaagtaacagtgggcacaaatgaggaacttaaatatgaattgtatgttagaaaatatttttcagccgggcgcagaggctcacgcctgtaatcccagcactttgggaggctgagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101074033 177 + 187378091 ACATAATCAGTAACTATAATATGTGATTCTTGATTGGTTCCAGAATCCAAAACAAATGCTATTAAAGTAACAGTGGGCACAAATGAGGAACTTAAATATGAATTgtatgttagaaaatatttttcagctgggcgcagaggctcacgcctgtaatcccagcactttgggaggctgagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4938475 177 + 91754291 acataatcagtaactataatatgcgactcttgattggttccagaatccaaaacaaatgctattaaagtaacagtgggcacaaatgaggaacttaaatatgaattgtacgttagaaaatatttttcagccgggcgcagaggctcacgcctgtaaccccagcactttgggaggctgagg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92421142 24 - 98464013 I a score=539327.000000 s hg38.chr3_KI270781v1_alt 60538 362 + 113034 cgggtggatcacctgaggtcaggagttt--gagaccagcctgaccaatatggagaaactccatctctactaaaaatacaaaattagctaggtatggtggcgcatgcccgaaatcccagctacttaggaggctgaggcaggagtattgcttgaacccgggaggtggaggttgtggtgagcccagatcatgccactgcactccagcctgggcaacaagagcaaaactccatctcaaaaaaaaaaaaaaaaaaaaaacaaaaaggaagaaagaa---------------agaaagaaca--acag-aaaatattcttcaattcatactaagtgtttggggtgtgataac-aatcttgtggtcctgaaggagaatgtccttattctt s panTro4.chr3 13809843 338 - 202329955 cgggtggatcacctgaggtcaggagttt--gagaccagcctgaccaatatggagaaactccatctctactaaaaatacaaaattagctaggtatggtggcgcatgcccgaaatcccagctacttgggaggctgaggcaggagtattgcttgaacctgggaggtggaggttgtggtgagcccagatcatgccactgcacttcagcctgggcaacaagagcaaaactccatctcaaaaaa------------------------aagaaagaa---------------agaaagaaaa--aaag-aaaatattcttcaattcatattaagtgtttggggtgtgataac-aatcttgtggtcctgaaggagaatgcctttattctt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13792416 345 - 202140232 cgggcagatcacctgaggtcggggagttcggagaccagcctgatcaatatggagaaactccatctctactaaaaatacaaaattagctaggtatggtggcacatgcctgaaatcccagctatttgggagactgaggcaggagtattgcttgaacccgggagttggaggttgcggtgagcccagatcatgccactgcactccagcctgggcaacaagagcaaaacaccatctcaaaaaaaaaaa-------------------aaaaaagaa---------------agaaagaaaa--aaag-aaaatattcttcaattcatattaagtgtttggggtgtgataac-aatcttgtggtcctgtaggagaatgtccttattctt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14343728 364 - 123690457 tgggcggatcacctgaggtccggagttc--tagaccagcctgaccaatatggagaaactccatctctactaaaaatacaaaattagctagatatggtggcgcatgcccgaaatcccatctacttgggaggctgaggcaggagtatcgcttgaacccgggaggtggaggttgcagtgagcccagatcatgccactgcactccagcctgtgcaacaagagcaaaactccatctcaaaaaaaaaaaaaaaaaaaaaagaaagaaaaggaaagaa---------------agaaagaaaaagaaag-aaaatattcttcaattcatattaagtgtttggggtgtgataac-aatcttgtggtcctgaaggagaatgtccttattctt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103280348 345 - 192460366 tgggcagatcatctgaggttgggaattc--gagaccagcctgactaacatggagaaaccccgtctctactaaaaatacaaaattagccgggcatggtggcgcatgcctataatcccagctactcaggaggctgaggcaggagtattgcttgaatctgggaggtggaggttgcagtgagccgagatcgtgccattgcactccagcctgggtgacaagagggaaactcagtctcaaaaaaaaaaa-------------------aaaaaaaaa---------------agaaacagaa--tcagaaaaaaaatcttcaattcatgttaagtgtttggggtgtgataacaaatcctgtggtcctgtaggagaatgtccttattctt i macFas5.chr2 C 0 I 313 s papAnu2.chr2 101074210 340 + 187378091 tgggcagatcatctgaggttgggaattc--gagaccagcctgactaacatggagaaaccccgtctctactaaaaatacaaaattagccgggcatggtggcgcatgcctataatcccagctactcaggaggctgaggcaagagtattgcttgaatctgggaggtgtaggttgcagtgagctgaaatcgtgccattgcactccagcctgggtgacaagagcgaaactcagtctc-----aaaaaa-------------------aaaaaaaaa---------------agaaacagaa--acagaaaaatattcttcaattcaTGTTAAGTGTTTGGGGTGTGATAACAAATCCTGTGGTCCTGTAGGAGAGTGTCCTTATTCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4938652 359 + 91754291 tgggcagatcatctgaggttgagaattc--gagaccagcctgactaacatggagaaaccctgtctctactaaaaatacaaaattagccgggcatggtggcacatgcctataatcccagctactcagaaggctgaggcaggagtattgcttgaatctgggaggtgtaggttgcaatgagccgagatcatgccattgcactcca-cctgggtgacaagagtgaaactcagtctcaaaaaaaaaaa-------------------aaaagaaaaagaaaaaaaagaaacagaaacagaa--acagaaaaaaattcttcaattcatgttaagtgtttggggtgtgataacaaatcctgtggtcctgtaggagaatgtccttattctt i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103636901 655 + 192599291 I e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92421142 24 - 98464013 I a score=1571492.000000 s hg38.chr3_KI270781v1_alt 60900 679 + 113034 aaaggaaatgcacaaatatttaggagtaaaatgttgtgatgtctgcagttgttttcaaaca---attcagccaaaaaaccaaaaagagagaaagaaagcaaatgtgg-caaaatattaatt-----------aataacgattaagaaaaggatatataagtatccattgcactcttctttcaacttatatgtgtgtttgaacatttttaaaacaaaaaGCTgaga-g-aaaaaaaatgaaacaggaagaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaacttcatttttacatacttttttacatattg-tattttcagag-aaatttgagaaactattacgagcac-----aaaaaag--aacagaaagctct-aaaataagaaaatttagtaagcaacctagagctctcggaagt--gaa--aaatataatcactgaaaaataacttaaatagaagggttg-gtagatgagaaaatagattttaaaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaggatcaattcataactccaacgcctgactaatagtaaccccagaaactaggaacagaaacatatggggcaggggcaagaattttcaaaatataaaacaagaaaacttcctagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg s panTro4.chr3 13810181 678 - 202329955 aaaggaaatgcacaaatatttaggagtaaaatgttgtgatgtctgcagttgttttcaaaca---attcagctgaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaatattaatt-----------aataactattaagaaaaggatatataagtatccattgcacccttctttcaacttatatgtgtgtttgaacatttttaaaacaaaaaGCTGaga-g--aaaaaaatgaaacaggaagaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaacttcatttttacatacttttttacatattg-tattttcagag-aaatttgagaaactattacgagcac-----aaaaaag--aacagaaagctct-aaaataagaaaatttagtaagcaacctagagctcttggaagt--gaa--aaatacaatcactgaaaaataacttaaatagaagggttg-gtagatgagaaaatagattttaaaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaggatcaattcataactccaacgactgactaatagtaaccccagaaactaggaacagaaacatatggggcaggggcaagaattttcaaaatataaaacaagaaaacttcctagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13792761 701 - 202140232 aaaagaaatgcacaaatatttaggagtaaaatgttgtgatgtctgcagttgttttcaaacatgcattcagctgaaaaacc----agagagaaagaaagcaaatgtggacaaaatattaattgcagacttcacaataatgattaagaaagggatatataagtatccattgcactcttctttcaacttacatgtgtgtttgaacatttttaaaataaaaagctgaga-g-aaaaaaaatgaaacaggaaaaatgaccctaaagaaaacaaggaatagcttgggaacaagagaaaacttcatttttacatacttttttacatattgatattttcagagcaaatttgagaaattattacaagcac-----aaaaaaggtaacagaaagctctaaaaataagaaaatttagtaagcaacctagagctctcggaagttcgaattaaatataatcaccgaaaaataacttaaatagaagggttgcgtagatgagaaaatagattttaaaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaggatcaattcgtaactccaatgcctgactaatagtaaccccagaaactaggaacagaaacatatgggggaggggcaagaattttcaaaatataaaacaagaaaacttcctagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14344092 677 - 123690457 aaaggaaatgcacaaatatttaggagtaaaatgttgtgatgtctgcagttgttttcaaaca---attcagctaaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaatgttaatt-----------agtaatcattaagaaaaggatatataagtatccattgcactcttcttccaacttatatgtgtgtttgaacatttttaaaataaaaagctgaga-g--aaaaaaatgaaacaggaaaaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaacttcatttttacatacttttttacacatcg-tattttcagag-aaatttgagaaatgattac-agcac-----aaaaaag--aacagaaagctct-aaaataagaaaatttagtaagcaacctagagctctcggaagt--gaa--aaatataatcactgaaaaataacttaaatagaagggttg-gtagatgagaaaatagattttaaaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaggatcaattcataactccaacgcctgactaatagtaaccccagaaactaggaacagaaacataggggggaggggcaagaattttcaaaatataaaacaagaaaacttcctagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103637556 681 + 192599291 aaagggaatgcacaaatatttaggggtaaaatgtcatgatgtctgcagttgttttcaaaca---attcagcacaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaata----tt-----------aatattgattcagaaaaggatgtataagtatccattgcactcttctttcatcttacatgtgagtttgaacatttttaaaacaaaaagctgagaggaaaaaaaaatgaaacaggaaaaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaatttcatttttgcatacttttttacatacag-tattttcagaaaaaatttgagaaactattacacgcac--aaaaaaaaag--aacagaaagctct-agaataagaaaatgtagtaagcaacctagagctctcggaagt--gaa--aaatacaatcactgaaaaataacttaaataaaagggttg-gtagatgagaaaatagattttagaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaagatcaattcatgactccaatgcctgactaatagtaatctcagaaactaggaacagaaacatagaggggaggggcagaaattttcaaaatataaaacaagaaaactttccagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i rheMac3.chr2 I 655 C 0 s macFas5.chr2 103281006 681 - 192460366 aaaggaaatgcacaaatatttaggagtaaaatgtcatgatgtctgcagttgttttcaaaca---attcagcacaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaata----tt-----------aatattgattcagaaaaggatgtataagtatccattgcactcttctttcatcttacatgtgagtttgaacatttttaaaacaaaaagctgagaggaaaaaaaaatgaaacaggaaaaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaatttcatttttgcatacttttttacatacag-tattttcagaaaaaaattgagaaactattacaagcac--aaaaaaaaag--aacagaaagctct-agaataagaaaatgtagtaagcaacctagagctctcagaagt--gaa--aaatacaatcactgaaaaataacttaaataaaagggttg-gtagatgagaaaatagattttagaaactaacaaaacagaaaatgtgaaagaaaagataagatctacagaagatcaattcatgactccaatgcctgactaatagtaatctcagaaactaggaacagaaacatagaggggaggggcagaaattttcaaaatataaaacaagaaaactttccagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i macFas5.chr2 I 313 C 0 s papAnu2.chr2 101074550 677 + 187378091 AAAGGAAATGCACAAATATTTAGGAGTAAAATGTCATGATGTCTGCAGTTGTTTTCAAACA---ATTCAGcacaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaata-----t-----------aataatgattCAGAAAAGGATGTATAAGTATCCATTGCACTCTTCTTTCATCTTACATGTgagtttgaacatttttaaaacaaaaagctgaga-gaaaaaaaaatgaaacaggaaaaatgaccctaaagaaaaCAAGG-ATAGCTTGGGAACAAGAGAAAATTTCGTTTTTGCATACTTTTTTACATAcag-tattttcagaaaaaatttgAGAAACTATTACaagcac--aaaaaaaaag--aacagaaagctct-aaaataagaaaatgtagtaaGCAACCTAGAGCTCTCGGAAGT--GAA--AAATACAATcactgaaaaataac--aaataaaagggttg-gtagatgagaaaatagattttagaaactaacaaaacagaaaatgtgaaagaaaagataagatCTACAGAAGATCAATTCATGACTCCAACTCCTGACTAATAGTAATCTCAGAAACTAGGAACAGAAACATAGAGGGGAGGGgcagaaattttcaaaatataaaacaagaaaacttcCCAGAACCAAAGAACATTTGACTTCCATCAAAGAATAATGAATGACAAATAACTCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4939011 680 + 91754291 aaaggaaatgcacaaatatttaggagtaaaatgtcatgatgtctgcagttgttttcaaaca---attcagcacaaaaaccagaaagagagaaagaaagcaaatgtgg-caaaata----tt-----------aataaagattcagaaaaggatgtataagtatccattgcactcttctttcatcttacatgtgagtttgaacatttttaaaacaaaaagctgaga-gaaaaaaaaatgaaacaggaaaaatgaccctaaagaaaacaagg-atagcttgggaacaagagaaaatttcatttttgcatacttttttacatacag-tattttcagaaaaaatttgagaaactattacaagcacaaaaaaaaaaag--aacagaaagctct-aaaataagaaaatgtagtaagcaacctagagctctcagaagt--gaa--aaatacaatcactgaaaaataac--aaataaaagggttg-gtagatgagaaaatagatttcagaaactagcaaaacagaaaatgtgaaagaaaagataagatctacagaagatcaattcatgactccaacgcctgactaatagtaatctcagaaactaggaacagaaacatggagggcaggggcagaaattttcaaaatataaaacaagaaaacttcccagaaccaaagaacatttgacttccatcaaagaataatgaatgacaaataactctg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24784771 16718 - 42124431 I e calJac3.chr15 92421142 24 - 98464013 I a score=408649.000000 s hg38.chr3_KI270781v1_alt 61579 149 + 113034 cccaggcacgcccacat-ca-tcagcatggaagtttaacatgctggggtttcagagactttt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaacaagagtcatgtaggattctcaata-TTTTTACTAGTCA s panTro4.chr3 13810859 149 - 202329955 cccaggcacgcccacat-ca-tcagcatggaagtttaacatgctggggtttcagagactttt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaacaagagtcatgtaggattctcaata-TTTTTACTAGTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13793462 151 - 202140232 cctaggcacgcccacat-cattcatcatggaagttcaacatgctggggtttcagagactgtt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaacaagagtcatgtaggattctcaataTTTTTTACTAGTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14344769 149 - 123690457 cccaggcacgcccacat-ca-tcatcatggaagttcgacatgctggggtttcagagactgtt-caagattccagagatataaacaaacacactaacatgtcacttacaaaggaacgagagtcatgcaggattctcaaaa-tttttactagtca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103638237 149 + 192599291 cccaggcacgcccacat-ca-tcatcatggatgttcaacatgctggggtttcagagactgtt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaataagagccaaatagggttctcaata-TTTGTACTAGTCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103281687 149 - 192460366 cccaggcacgcccacat-ca-tcatcatggatgttcaacacgctggggtttcagagactgtt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaataagagccaaatagggttctcaata-TTTGTACTAGTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101075227 149 + 187378091 CCCAGGCACGCCCACAT-CA-TCATCATGGATGTTCAACACGCTGGGGTTTCAGAGACTGTT-CAAGATTCCAGAGATATAAACAAACACACTAACATGTCACCTACAAAGGAACAAGTGCCAAATAGGGTTCTCAATA-TTTGTACCAGTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4939691 149 + 91754291 ccaaggcacgcccacat-ca-tcatcatggatgttcaacacgctggggtttcagagactgtt-caagattccagagatataaacaaacacactaacatgtcacctacaaaggaacaagagccaaatagggttctcaata-TTTGTACTAGTCA i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24801489 143 - 42124431 ccaagaca----cacatcca-tcatcgtggaagtgcaagatgctggggatacagaaactgttaaaagattccagaggtataaacaa----actaacatgtcacctacaaaggaccaagggtcaCATACGTTTATGCACA-TTTTTACCAGGCA i canFam3.chr34 I 16718 I 105 e calJac3.chr15 92421142 24 - 98464013 I a score=232287.000000 s hg38.chr3_KI270781v1_alt 61728 112 + 113034 TGCTTGATTCTAGGAGCACCAGAAAATCTCCAGGTGGCGAGGAGGCTGGGCTTCCCTCCAGGAA-GTCCTGTGTCATATGCTTGG----------CCCAATACCCCAATACCCCAATCGATGA s panTro4.chr3 13811008 112 - 202329955 TGCTTGATTCCGGGAGCACCAGAAAATCTCCAGGTGGCGAGGAGGCTGGGCTTCCCTCCAGGAA-GTCCTGTGTCATATGCTTGG----------CCCAATACCCCAATACCCCAATCAATGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13793613 122 - 202140232 TGCTTGATTCTAGGAGCACCAGAAAA-CTCCAGGTGGCAAGGAGGCTGGGCTTCCCTCCAGGAATGTCCTGTGTCGTATGCTTGGTCCCAAAATCCCCAATACCCCAATACCCCAATCAATGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14344918 112 - 123690457 tgcttgattctaggagCACCAGAAAAACTCCAGGTGGCGAGGAGGCTGGACTTCCCTCCAGGAA-GTCCTGTGTCATTTGCTTGG----------CCCAATACTCCAATACCCCAATCAATGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103638386 104 + 192599291 TGCTTGATTCTAGGAAAACCAGAAAAACTCCAGGTGGCGAGGAGGCTGGACTTCCCTCCACGAA-GGCCTGTGTCACGTGCTTGG------------------TCCAATACCCCAATCAATGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103281836 104 - 192460366 TGCTTGATTCTAGGAAAACCAGAAAAACTCCAGGTGGCGAGGAGGCTGGACTTCCCTCCACGAA-GGCCTGTGTCACGTGCTTGG------------------TCCAATACCCCAATCAATGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101075376 104 + 187378091 TGCTTGATTCTAGGAAAACCAGAAAAACTCCAGGTGATGAGGAGGCTGGACTTCCCTCCAGGAA-GGCCTGTGTCACGTGCTTGG------------------TCCAATACCCCaatcaatga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4939840 104 + 91754291 TCCTTGATTCTAGGAAAACCAGAAAACCTCCAGGTGGCGAGGAGGCTGGACTTCCCTCCAGGAA-GGCCTGTGTCACGTGCTTGG------------------TCCAATACCCCAATCAATGA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24801632 105 - 42124431 I e calJac3.chr15 92421142 24 - 98464013 I a score=625277.000000 s hg38.chr3_KI270781v1_alt 61840 212 + 113034 AATTATTTTTCattcattattctttgatggaagtcaaatgttctttagttctagcaagttttcttgttttatatttggaaaattcct--ccctcccctatatgtttctgttcctagtttctacaattacta-tagacgttggagtcctaggattgatgatcc-tctatagatct-tatattttctttcacattttctgttttgttagttttttaaac s panTro4.chr3 13811120 212 - 202329955 AATTATTTTTCATTCATTATTCTTTGATGGAAGTCAAATGTTCTTTAGTTATAGCAAGTTTTCTTGTTTTATATTTGGAAAATTCCT--CCCTCCCCTATATGTTTCTGTTCCTAGTTTCCACAATTACTA-TAGGCGTTGGAGTCCTAGGATTGATGATCC-TCTATAGATCT-TATATTTTATTTCACATTTTCTGTTTTGTTAGTTTTTTAAAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13793735 215 - 202140232 AATTAtttttcattcattattctttgatggaagtcaaatgttctttagctctaggaagttttcttgttttatatttggaaaattcct--ccctcccccatatgtttctgttcctagtttctacaattactattaggcgttggagtcctaggattgatgatccttctatagatctatatattttctttcacattttgtgttttgttagttttttAAAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345030 213 - 123690457 AATTATTTTTCATTCATTATTCTTTGATGGTGGTCAAATGttctttagctctagcaagttttcttgttttatatttggaaaattcct--ccctcccccaaacgtttctgttcctagtttctacgattactattaggtgttggagtcctaagattgatgatcc-tctatagatct-tatattttctttcacattttctgttttattagttttttAAAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103638490 212 + 192599291 AATTATTTTTCATTCATTATTCTTTGATGGAAGTCAAATGTTCTTTAGCTCTAGCAAGTTTTCTTGTTTTATATTTGGAAAATTCCT--CCCTCCCCCATATGTTTCTGTTCCTAGTTTCTACAATTATTATGAGGCATTGGAGTCCTAGGATTGATGATCC-TCTATAGATCT-TATATTTTCTTTCACATTTTCTGTTTTGTTAG-TTTTTAAAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103281940 212 - 192460366 AATTATTTTTCATTCATTATTCTTTGATGGAAGTCAAatgttctttagctctagcaagttttcttgttttatatttggaaaattcct--ccctcccccatatgtttctgttcctagtttctacaattactatgaggcattggagtcctaggattgatgatcc-tctatagatct-tatattttctttcacattttctgttttgttag-tttttAAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101075480 212 + 187378091 aattatttttcattcattattcttTGATGGAAGTCAAATGTTCTTTAGCTCTAGcaagttttcttgttttatatttggaaaattccT--CCCTCCCCCATATGTTTCTGTTCCTAGTTTCTACAATTACTATGAGGCGTTGGAGTCCTAGGATTGATGATCC-TCTATAgatct-tatattttctttcacattttctgttttgttag-tttttaaac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4939944 212 + 91754291 AATTATTTTTCATTCATTATTCTTTGATGGAAGTCAAATGTTCTTTAGCTCTAGCAAGTTTTCTTGTTTTATATTTGGAAGATTCCT--CCCTCCCCCATATGTTTCTGTTCCTAGTTTCTACAATTACTATGAGGCGCTGGAGTCCTAGGATTGATGATCC-TCTATAGATCT-TATATTTTCTTTCACATTTTCTGTTTTGTTAG-TTTTTAAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92421166 214 - 98464013 AGTTGCTTGTCAGTCATTAGTCTCTGACGGAAggaaaatgttctttagccctaggaagttttctctttttatattttgagaattcctgcccctcccccgtatgtttctgttcctagtttctgggattactattaggcgttggagtcctgggagtgatgatcc-tccatagatct-taggttttctttcacattttctgttttgtTAG-TGTTTAAAC i calJac3.chr15 I 24 C 0 e canFam3.chr34 24801632 105 - 42124431 I a score=350123.000000 s hg38.chr3_KI270781v1_alt 62052 113 + 113034 cagtaccctggtgacttgtatatctttcttTTTCAC--AAAAGAGTGAATTAACTGACTGTGGGAACATCTGTTTGTTTATCTTTATATCC---TCTTCTCTTTATTTCTAAAGTCCT s panTro4.chr3 13811332 115 - 202329955 CAGTACCCCGGTGACTTGTATATCTTTCTTTTTCAC--AAAAGAGTGAATTAACTGACTGTGGGAACATCTGTTTGTTTATCTTTATATCC-CTTCTTCTCTTTATTTCTAAAGTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13793950 118 - 202140232 CAGTACCCCGGTGACTTGTATATCTTTCTTTTTCACCAAAAGGAGTGAATTAACTGACTGCGGGAACATCTGTTTGTTTATCTTTATATCCCCTTCTTCTCTTTATTTCTAAAGTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345243 111 - 123690457 CAGTACCCCAGTGACTTGTATATCTTTCTTTTTCAC--AAAAGAGTGAATTAACTCACTGCGGGAACA--CGTTTGTTTATCTTTATATCC---CCTTCTCTTTATTTCTAAAGTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103638702 116 + 192599291 CAGTACCCTGGGGACttatatacctttctttttcac--aaaacagtgaattaactggcagcaggaacatccatttgtttatctttatgtccccTTCTTCTCTTTATTTCTAAAGTCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103282152 116 - 192460366 CAGTACCCTGGGGACttatatacctttctttttcac--aaaacagtgaattaactggcagcaggaacatccatttgtttatctttatgtccccTTCTTCTCTTTATTCCTAAAGTTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101075692 116 + 187378091 CAGTACCCTGGGAACTTATATACCTTTCTTTTTCAC--AAAACAGTGAATTAACTGGCAGCAGGAAcatccatttgtttatctttatgtccccttcttctctttatttctaaaGTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4940156 116 + 91754291 CAGTACCCTGGGGACTTACATACCTTTCTTTTTCAC--AAAACGGTGAATTAACTGGCAGCAGGAACATCCATTTGTTTATCTTTATGTCCCCTTCTTCTCTTTATTTCTAAAGTCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92421380 113 - 98464013 CAATACCCCAGTGAGTTGTATATCTTTCTTTTTCAC--AAAAGAGTGAATTAACTGAAAGTAGGAACACCCACTTTTTTATCTTTATATCC---CCTTCTCTTGATTTCTAAAGTTCT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24801737 112 - 42124431 CAAGACCATAGTTCCTGGCA---CCTCTTTTTCCAC--AAGAAAGTGAGTTACCTGAAAGTAGGAATACCAACTTATCTACCATTATATCC-CCTCTCTTCTTTATTCCTAAAGTCCT i canFam3.chr34 I 105 I 11 a score=931194.000000 s hg38.chr3_KI270781v1_alt 62165 337 + 113034 AAAAAGAGTAGACACTCAGAAttc-ttttttgtttg-tttgtaa-tttttcgagatggagtcttgct--gtgtcgttcaggctggagtgcagtggc-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgatcctcctgcctcagcctcctgagtagctggaattacaggcatctgccaccacgactggctaat--------tttattt-----ta---tttttttgtat-ttttagtagagatggggtttcaccatgttggccaggatggtcttgaactcctgacctcatgatctgcccaccttggcctcccaaagtgctggaattgcaggcatgagccaccgcaccca s panTro4.chr3 13811447 337 - 202329955 AAAAAGAGTAGACACTCAGAAttc-ttttttgtttg-tttgtaa-tttttcgagatggagtcttgct--gtgttgttcaggctggagtgcagtggc-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgatcctcctgcctcagcctcctgagtagctggaattacaggcatctgccaccatgactggctaat--------tttattt-----ta---tttttttgtat-ttttagtagagatggggtttcaccatgttggccaggatggtcttgaactcctgacctcatgatctgcccgccttggcctcccaaagtgctgggattgcaagcatgagccaccgcaccca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13794068 348 - 202140232 ACAAAGAGTGGACAGTCAGAAttctttttttgtttgttttgtaattttttcgagatggagtcttatttgttgtcgttcaggctggagtgcagtggctttgatcctccggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcagcctcctgagtagctggaattacaggcgtctgccaccacgactggctaat--------tttattt-----tatattatttttgtat-ttttagtagagatggggtttcaccacattggccaggatggtcttgaactcctgaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccgcatcca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345354 337 - 123690457 ACAAAGAGTAGACACTCAGAAttc-ttttttgtttg-tttgtaa-tttttcgagatggagccttgct--gtgtcattcaggctggagtgcagtggc-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcggtctcctaagtagctggaattacaggcatctgccaccacgactggctaat--------tttattt-----ta---tttttttgtat-ttttagtagagatggggtttcaccatgttggccaggatggtcttgaactcctgacctcgtgatctgctcgcctcggcctcccaaagtgctgggattacaggcatgagccaccacaccca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103638818 338 + 192599291 ACAAAGAGTAGACATTCAGAAttc-ttttttg-----tttgtaa-tttttcaagatggagtcttgct--gtgtcatccaggccggagtgcagtggt-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggattacaggcgcctgccaccacgactggctaat--------tttatttatttatt---tatttgtgtat-ttttagtacagacagagtttcaccatattgggcaggatgatcttgaactcctgacctagtgatctgcccacctcggcctcccaaagtgctgtgtttacaggcatgagtcaccacaccca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103282268 338 - 192460366 ACAAAGAGTAGACATTCAGAAttc-ttttttg-----tttgtaa-tttttcaagatggagtcttgct--gtgtcatccaggccagagtgcagtggt-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggattacaggcgcctgccaccacgactggctaat--------tttatttatttatt---tatttttgtat-ttttagtacagacagagtttcaccatgttgggcaggatggtcttgaactcctgacctagtgatctgcccacctcggcctcccaaagtgctgtgtttacaggcatgagtcactgcaccca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101075808 338 + 187378091 ACAAAGAGTAGACattcagaattc-ttttttg-----tttgtaa-tttttcaagatggagtcttgct--gtgtcatccaggctggagtgcagtggt-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggattacaggcgcctgccaccacgactggctaat--------tttatttatttatt---tatttttgtat-ttttagtacagacggagtttcaccatgttgggcaggatggtcttgaactcctgacctagtgatgtgcccacctcgggctcccaaagtgctgggtttacaggcatgagtcaccgcaccca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4940272 345 + 91754291 ACAAAGAGTAGACATTCAGAAttc--tttttg-----tttgtaa-tttttcaagatggagtcttgct--gtgtagtccaggccggagtgcagtggt-gtgatc--tcggctcactgcaacctccacctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggattacaggcgcctgccaccacgactggcttattttatttatttatttatttatt---tatttttgtat-ttttagtacagacagagtttcaccatgttgggcaggatggtcttgaactcctgacctagtgatctgcccacctcagcctcccaaagtgctgggtttacaggcatgagtcaccacaccca i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92421493 334 - 98464013 ACAAAGAATAGACACTCAGAAttc-ttttttg-----tttgtat-ttttttgagatggaatctccct--ttgttgtccaggctggagtgcagtggc-acgatc--tcggctcactgctacctctacctcccgaattcacgcaattctcctgcctcagcctcctgagtgtcggggatcacaggcacccatcaccacccccagctaat--------ttttttt-----tt---tttttttttctaatttagtagagatagggtttcaccatgttggccaggatggtctcgaactcctgatctcatgatccgcccaccttggcctccgaaagtgctgagattacaggcatgagccaccacgccca i calJac3.chr15 C 0 C 0 e canFam3.chr34 24801849 11 - 42124431 I a score=8400.000000 s hg38.chr3_KI270781v1_alt 62502 3 + 113034 gcc s panTro4.chr3 13811784 3 - 202329955 gcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13794416 3 - 202140232 gcc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103639156 3 + 192599291 gcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103282606 3 - 192460366 gcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101076146 3 + 187378091 gcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4940617 3 + 91754291 gcc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92421827 3 - 98464013 gcc i calJac3.chr15 C 0 C 0 e canFam3.chr34 24801849 11 - 42124431 I e nomLeu3.chr11 14345691 0 - 123690457 C a score=752661.000000 s hg38.chr3_KI270781v1_alt 62505 311 + 113034 CAGAATTCTTTTGAAGAAGTTGTATCAGTGTCAGTCTTTCCTTTCATATCTCACCACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTACTCTGTTCTCTTATGCATTCTGGAAACACCGAGAACCTCAGTATGCTAGATAAA-------------------------------------------------------------------------------------------GGGGTATCAAATAGACGAAGATCAGTCCTGAGTTCCAGGAGCTCACAGCTGCGAGGAGAGAGA-CCACGTACAGGGCCATGGCCCTCCCGGGAG---------CTTCCTCTCCAAACCTACAGCACAGAACCCAGATGCACCTACCTACACGAGAGTTTCATGCCCTCTATTCTTAAA s panTro4.chr3 13811787 307 - 202329955 CAGAATTCTTTTGAAGAAGTTGTATCAGTGTCAGTCTTTCCTTTCATATCTCACCACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCttatgcattctggaaacactgagaacctcagtatgctagataaa-------------------------------------------------------------------------------------------ggggtatcaaatagacgaagatcagtcctgagttccaggagctcacagctgcgaggagagaga-cCACATACAGGGCCATGGCCCTCCCGGGAG---------CTTCCTCTCCAAACCTACAGCACAGGACCCAGATGC----ACCTACACGAGAGTTTCATGCCCTCTATTCTTAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13794419 306 - 202140232 CAGAATTCTTTTGAAGAAGTTGTATCAATGTCAGTCTTTCCTTCCATATCTCACCACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCTTATGCATTCTGGAAACACCGAGAACCTCAGTATGCTAGATAAA--------------------------------------------------------------------------------------------AGGTATCAAATAGACAAAGATCAGTCCTGAGTTCCAGGAGCTCACAGCTGCGAGGAGAGAGA-CCATGTACAGGGCTGTGGCCCTCGCGGGAG---------CTTCCTCTCCAAACCTACAGGACAGAACCCAGATGC----ACCTACGTGAGAGTTTCATGCCCTCTATTCTTAAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103639159 307 + 192599291 CAGAATTCTTTTGAATAAGTTGTATCAGTGTCATTCTTTCCGTCTATATCTCACTACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCTTATGCATTCTGGAAACACCGAGAACCTCAGTATGCTAGATAAA-------------------------------------------------------------------------------------------GGGGTATCAAATAGACGAAGATCAGTCCTGAGTTCCAGGAGCTCAGAGCTGCAAGGAGAGAGA-CCACATACAGGGCCATGCCCCTCCCAGGAG---------CTTCCTCTCCAAACCTACAGCACAGAACCCAGATGC----ACCTACACGAGAGTTTCATGGCCTCTATTTTTAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103282609 307 - 192460366 CAGAATTCTTTTGAATAAGTTGTATCAGTGTCATTCTTTCCGTCTATATCTCACTACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCTTATGCATTCTGGAAACACCGAGAACCTCAGTATGCTAGATAAA-------------------------------------------------------------------------------------------GGGGTATCAAATAGACGAAGATCAGTCCTGAGTTCCAGGAGCTCACAGCTGCAAGGAGAGAGA-CCACATACAGGGCCATGCCCCTCCCAGAAG---------CTTCCTCTCCAAACCTACAGCACAGAACCCAGATGC----ACCTACACGAGAGTTTCATGCCCTCTATTTTTAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101076149 307 + 187378091 cagaattcTTTTGAATAAGTTGTATCAGTGTCAGTCTTTCCGTCTATATCTCACTACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCTTATGCATTCTGGAAACACCGAGAACCTCAGTATGCTAGATAAA-------------------------------------------------------------------------------------------GGGGTATCAAATAGACGAAGATCAGTCCTGAGTTCCAGGAGCTCACAGCTGCGAGGAGAGAGA-CCACATACAGGGCCATGCCCCTCCCAGGAG---------CTTCCTCTCCAAACCTACAGCACAGAACCCAGATGC----ACCTACACGAGAGTTTCATGCCCtctatttttaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4940620 306 + 91754291 CAGAATTCTTCTGAATAAGTTGTATCAGTGTCAGTCTTTCCATCTATATCTCACTACTTCCTTCCCTCTCATTTTCCATCCCCCTCTTCCTCTGTTCTCTTATGCATTCTGGAAACACTGAGAACCTCAGTATGCTAGATAAA-------------------------------------------------------------------------------------------GGGGTATCAAATAGATGAAGATCAGTCCTGAGTTCCAGGAGCTCTCAGCTGCGAGGAGAGAGA--CACATACAGGGCCATGCCCCTCCCAGGAA---------CTTCCTCTCCAAACCTATAGCACAGAACCCAGATGC----ACCTACATGAGAGTTTCATGCCCTCTATTTTTAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92421830 396 - 98464013 CAGAATTCCTTTGAATAAGTGGTATCAGTGTCAGTctctccttccgtatcttaccatttccttccctctcattttctctccccttcttcctctgttctcttACGCATTCTGGAAACACGGAGAACCTCAGTATGCTAGATAAAGGAGTATCAGATAGACGAAGCCCAGTTCTGAGTTCCTCCCTCTGTTCTCTTATGCGTTCTGGAAACACAGAACCTCAGTATGCTAGATAAAGGAGTATCAAATAGACGAAGCCCAGTTCTGAGTTCCAGGAGCTCACAGCTGTGA--AGAGAGA-CCACGTACAGCAACATGGCCTTCCCAGGAG---------CTTCCTCTCCAAACCTACAGCACAGAACCCAGACGC----ACCTACACGAGTGCTTGATGCCCTCTATTCTTAAA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24801860 241 - 42124431 CAAAATCCTATCGAATAAGCCCTAGTAGTCTC--------------TAGCTCCTCGTTTCCATTCCTCCCATTTTCTGT-CCCTTCTTTCTCTGCTCCCTTGTGCATCCGG-----------------------------AAA-------------------------------------------------------------------------------------------GGGG---------GGGGGGGGGGAGT---------------CTCACAGC-------AGAGAGACCCCCACGCAGGGACCTGGCCCTCCTGGGAGCTTGGCCTTCTTCCTCTCCAGATC-GCAGCCCAGAATCCAGATGT----CCCTACACAGTCGTGTGATGCTCTCTATTCTTAAA i canFam3.chr34 I 11 C 0 e nomLeu3.chr11 14345691 0 - 123690457 C a score=325639.000000 s hg38.chr3_KI270781v1_alt 62816 170 + 113034 TCTGAATTAAAGATAAGttttattttat---tttat-------------------------------------------------tttgtttttgagatggaa-ttttgctcctgttgcccaggctggagtacaatggcacgatctcaactcaccacaacctccacctccc-aggttcaagtgatt-ctcctgcctcaacctcccaagtagctgggattacaggt s panTro4.chr3 13812094 170 - 202329955 TCTGAATTAAAGATAAattttattttat---tttat-------------------------------------------------tttatttttgagatggag-tttcactcttgttgcccgggctagagtgcaatggcgtgatctcagctcaccacaacctccatctccc-aggttcaagtgatt-ctcctgcctcaacttccccagtagctgggattacagcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13794725 176 - 202140232 TCTGAATTAAAGATAAAttttatcttttatatttat-------------------------------------------------tttatttttgagatggagttttcgctcttgttgcccaggctggagtgcaatggcgtgatctcagctcaccacaacctccaccttctggggttcaagtgattcctcctgcctcaacctcccaagtagctgggattacaggc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103639466 165 + 192599291 TCTGAATTAAAGATAAattttat--------tttat-------------------------------------------------tttatttttgagatggag-tttcactcttgttgtccaggctggagtgcaatggcgcgatctcggctctctgcaacctccacctccc-gggttccagcgatt-ctcttgcctcaacctcccgagtagctgggattacaggc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103282916 165 - 192460366 TCTGAATTAAAGATAAAttttat--------tttat-------------------------------------------------tttatttttgagatggag-tttcactcttgttgtccaggctggagtgcaatggcgcgatctcggctctccgcaacctccacctccc-gggttccagcgatt-ctcttgcctcaacctcccgagtagctgggattacaggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101076456 165 + 187378091 tctgaattaaagataaattttat--------tttat-------------------------------------------------tttattttagagatggag-tttcactcttgttgtccaggctggagtgcaatggcgcgatctcggctctccgcaacctccacctccc-gggttccagcgatt-ctcctgcctcaacctcccgagtagctgggattacaggc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4940926 165 + 91754291 TCTGAATTAAAGATAACttttat--------tttat-------------------------------------------------tttatttttgagatggag-tttcactcttgttgtccaggctggagtgcaatggtgggatctcggctctccgcaacctccacctccc-gggttcgagtgatt-ctcctgcctcaacctcccgagtagctgggattacaggc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92422226 214 - 98464013 TCTGAATTAACGATAAGTTAAAT--------TTTATGTGTTTCTAGTTCAAACAGCTACTTCTTgtggtggtggtggtggtgatggtTGCTGttgagacaggg-tctcactc-tgttgcccaggctggaatgcagtggcacaatcatggcttgccgcagcctcagcctccccaggctcaggtgatt-ctccctcctcagcctccctagcagctgggactataggt i calJac3.chr15 C 0 I 15700 e canFam3.chr34 24802101 0 - 42124431 C e nomLeu3.chr11 14345691 0 - 123690457 C a score=518195.000000 s hg38.chr3_KI270781v1_alt 62986 308 + 113034 acgcaccaccacg--cctgg--ctaattttgtatttttagtagagacggggtttctccatgttgataaggctggtctcgaactcccaacctc-agttgatctgcccgcctcag-cctcccaaagtgct-gggataaca-ggtgtgagctaccatgcctggGCTTATATGTTTCTAGTCCAAACATTTAGCTACC----------tttttttttttttgagacgaagtctcactctgttgcccaagctggagcacagtggcacaatcgtggctcgctgcagcctcaacctcctcaggctcaggtgattctcccacctcggcctccct s panTro4.chr3 13812264 318 - 202329955 acgcaccaccaca--cctgg--ctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccaacctc-acgtgatctgcccgcctcag-cctcccaaagtgct-gggattaca-ggtgtgagccaccatgcccggccTTATATGTTTCTAGTCCAAACATTTAGCTACCtttttttttttttttttttttttgagacaaagtctcactctgttgcccaagctggagcatggtggcacaatcatggcttgctgcagcctcagcctcctcgtgctcaggcatttctcccacctcggcccccct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13794901 316 - 202140232 atgcgccaccatggccctgggcctaattttgtgtttttagtagagacggggtttctccatgttggtcaggttggtctcgaactcctaaactcaaggtgatctgcccacctcagccctcctaaagtgctggggattacagggtgtgagctactgtgcccagccTTATATGTTTCTAGTCCAAACATTTAGCTACC--------tttttttttttttttgagac--agtctcactctgttgcccaagctggagcgcagtggcacaatcatggcttgccgcagcctcaacctccttgggctcaggcgattctcccaccttggcccccct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103639631 312 + 192599291 acgcaccaccacg--cctgg--ttaattttatatttttagtagagacagggtttctccatgttggtcaggttggtctcgaactcccaacctc-aagtgatccaccctcctcag-cctcccaaagtgct-gggattaca-ggtgtgagccaccgtgcctggccTTACATGTTTCTAGTCCAAACATTTAGCTAC------ttttttttttttttttttgagacaggatctcactctgttgcccaagctggagtacagtggcacaatcatggctcgctgcagcctcaacctccccagtctcaggcgattcttccacctcggcctccct i rheMac3.chr2 C 0 I 165 s macFas5.chr2 103283081 311 - 192460366 acgcaccaccacg--cctgg--ttaattttatatttttagtagagacagggtttctccatgttggtcaggttggtctcggactcccaacctc-aagtgatccaccctcctcag-cctcccaaagtgct-gggattaca-ggtgtgagccaccgtgcctggccTTACATGTTTCTAGTCCAAACATTTAGCTAC-------tttttttttttttttttgagacaggatctcactctgttgcccaagctggagtacagtggcacaatcatggctcgctgcagcctcaacctccccaggctcaggcgattcttccacctcggcctccct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101076621 313 + 187378091 acgcaccaccacg--cctgg--ctaattttatatttttagtagagacagggtttctccatgttggtcaggttggtctcgaactcccaacctc-aagtgatccaccctcctcag-cctcccaaagtgct-gggattaca-ggtgtgagccaccgtgcctggccttacatGTTTCTAGTCCAAACatttagttac-----tttttttttttttttttttgagacaggatctcactctgttgcccaagctggagtgcagtggcacaatcagggctcgctgcagcctcaacctccccaggctcaggcgattcttccacctcggcctccct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4941091 316 + 91754291 acgcaccaccacg--cctgg--ctaattttatatttttagtagagacagggtttctccatgttggtcaggttggtctcgaactcccaacctc-aagtgatccaccctcctcgg-cctcccaaagtgct-gagattcca-ggtgtgagccaccgtgcctggccTTACATGTTTCTAGTCCAAACATTTAGCTACC-ttttttttttttttttttttttgagacaggatctcactctgttgcccaagctggagtacagtggcacaatcatggctcgctgcagcctcaacctccccaagctcaggcgattcttccaccttggctccct- i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24802101 0 - 42124431 C e calJac3.chr15 92422440 15700 - 98464013 I e nomLeu3.chr11 14345691 0 - 123690457 C a score=162445.000000 s hg38.chr3_KI270781v1_alt 63294 144 + 113034 agtagctgggactacaggtacgcaccactacaccctgctaatttttttgtttttgt-attttttgtagagatggggtttcttcatgttacccaggctggtcttgaactcctgggctcaagcaatctgcctacttcagcctcccaa s panTro4.chr3 13812582 144 - 202329955 agtagctgggactacaggtacgcaccaccacaccctgctaatttttttgtttttgt-attttttgtagaggtggggtttctccatgttacccaggctggtcttgaactcctgggctcaagcaatccgcttacttcagcctcccaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795217 144 - 202140232 agtagctgggactataggtacgcaccaccacaccctgctaatttttttgtttttgt-attttttgtagagatggggtttctccgcgttactcaggctggtcttgaactcctgggctcaagcaatccgcctacttcagcctcccaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103640108 136 + 192599291 agtagctgggactacaggaacccaccacttcacccggctagt-------tttttgtattctttagtagagacggggtttcaccaggttagccaggatggtctcaatctcctgacctc--gtgatccgcccgtcttggcctcctac i rheMac3.chr2 I 165 C 0 s macFas5.chr2 103283392 144 - 192460366 agtagctgggactacaggtatgcaccaccacaccctgctaatttttttgtttttgt-tttttttgtagagatggggtttctccatgttacccaggctggtcttgaactcctgggctcaagcaatccgcctacagtagcctcccaa i macFas5.chr2 C 0 I 281 s papAnu2.chr2 101076934 54 + 187378091 agtagctgggactacaggtacgcaccaccacaccctgctacc-------------------------------------------------------------------------------------------gtagcctcccaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4941407 143 + 91754291 agtagctgggactacaggtacgcaccaccacaccctgctaatttttttgtttttg--tttttttgtagagatggggtttctccatgttacccaggctggtcttgaactcttgggctcaagcaatccgcctaccgtagcctcccaa i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24802101 0 - 42124431 C e calJac3.chr15 92422440 15700 - 98464013 I e nomLeu3.chr11 14345691 0 - 123690457 C a score=8022.000000 s hg38.chr3_KI270781v1_alt 63438 4 + 113034 agtg s panTro4.chr3 13812726 4 - 202329955 agtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795361 4 - 202140232 agtg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103640244 4 + 192599291 agtg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103283817 4 - 192460366 agtg i macFas5.chr2 I 281 C 0 s papAnu2.chr2 101076988 4 + 187378091 agtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4941550 4 + 91754291 agtg i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24802101 0 - 42124431 C e calJac3.chr15 92422440 15700 - 98464013 I e nomLeu3.chr11 14345691 0 - 123690457 C a score=50609.000000 s hg38.chr3_KI270781v1_alt 63442 31 + 113034 ctaggattacaagcataagccaccatacccg s panTro4.chr3 13812730 31 - 202329955 ctaggattacaggcatgagccaccacaccca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795365 31 - 202140232 ctaggattacaggcatgagccaccacaccca i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103640248 31 + 192599291 ctgggattacagacttgagccaccgtgcccg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103283821 31 - 192460366 ctgggattacagacttgagccaccgtgcccg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101076992 31 + 187378091 ctaggattacaggcataagccaccacaccca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4941554 31 + 91754291 ctaggattacaggcataagccaccacaccca i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24802101 29 - 42124431 CTTGAGTTACA--CATGAATTAAATTTTCTA i canFam3.chr34 C 0 C 0 e calJac3.chr15 92422440 15700 - 98464013 I e nomLeu3.chr11 14345691 0 - 123690457 C a score=6130.000000 s hg38.chr3_KI270781v1_alt 63473 4 + 113034 gcc----T s panTro4.chr3 13812761 4 - 202329955 gcc----T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795396 4 - 202140232 gcc----T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345691 4 - 123690457 gcc----T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640279 8 + 192599291 gccAGCTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103283852 8 - 192460366 gccAGCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101077023 4 + 187378091 gcc----t i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4941585 4 + 91754291 gcc----T i chlSab2.chr15 C 0 I 304 s canFam3.chr34 24802130 4 - 42124431 GCT----T i canFam3.chr34 C 0 C 0 e calJac3.chr15 92422440 15700 - 98464013 I a score=27308.000000 s hg38.chr3_KI270781v1_alt 63477 10 + 113034 ACCTACTTTT s panTro4.chr3 13812765 10 - 202329955 ACCTACTTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795400 10 - 202140232 ACCTACTTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345695 10 - 123690457 ACCTACTTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640287 10 + 192599291 ACCTACTTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103283860 10 - 192460366 ACCTACTTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101077027 10 + 187378091 acctactttt i papAnu2.chr2 C 0 I 62274 s chlSab2.chr15 4941893 10 + 91754291 ACCTACTTTT i chlSab2.chr15 I 304 C 0 s canFam3.chr34 24802134 10 - 42124431 AAACGTTTTT i canFam3.chr34 C 0 C 0 e calJac3.chr15 92422440 15700 - 98464013 I a score=253010.000000 s hg38.chr3_KI270781v1_alt 63487 131 + 113034 AACTTGTGGAATTTTCTATAAGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCTCCTTGGTATAATGCAGGTAGAATCCACATGCTGCCTCCAGCTGCTGTACTTTCCTTTCCCTGCGAGTTATTCTTTGC s panTro4.chr3 13812775 131 - 202329955 AACTTGTGGAATTTTCTATAAGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCTCCTTGGTTTAATGCAGGTAGAATTCATATGCTGCCTCCAGCTGCTGTACTTTCCTTTCCCTGCGAGTTATTCTTTGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795410 129 - 202140232 AATTTGTGGAATTTTCTATAAGGTCAGGGATGCCTGGGGGA--AAAAGTTTCCTCCTTGGTATAATGCAGGTAGAATTCGTATGCTGCCTCCAGCTGCTGTACTTTCCTTTCCCGGCAAGTTATTCTTTGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345705 131 - 123690457 AACTTGTGGAATTTTCTATAAGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCTCCTTGGTATAATGCAAGTAGAATTCATATGCTGCCTCCAGCTGCTGTACTTTCCTTTCCCTGAGAGTTATTCTTTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640297 131 + 192599291 AACTTGTGGGATTTTCTATCAGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCACCTTGGTATAATACAGGTAGAATTCATATGCTCCCTCCACCTGCTGTACTTTCCTTTCCCTGCGAGCTATTCTTTGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103283870 131 - 192460366 AACTTGTGGGATTTTCTATCAGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCACCTTGGTATAATACAGGTAGAATTCATATGCTCCCTCCACCTGCTGTACTTTCCTTTCCCTGCGAGCTATTCTTTGT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4941903 131 + 91754291 AACTTGTGGGATTTTCTATCTGGTCAGGGATGCCTGGGGGAACAAAAGTTTCCACTTTGGTATAATACAGGTAGAATTCATATGCTCCCTCCACCTGCTGTACTTTCCTTTCTCTGCGAGCTATTCTTTGT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24802144 126 - 42124431 TATTTATGAAATTTTCTAAAGCGCCGGGGCT-CCTGTAGGAAGCTACATTTCCTCCTTAGTGTAATCCCAGTAGAATCTCCGTGTCCCCTCCGACTGCTGCCCTGGC----CCCTGTGAGTCGGTGGGTGG i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101077037 62274 + 187378091 I e calJac3.chr15 92422440 15700 - 98464013 I a score=315461.000000 s hg38.chr3_KI270781v1_alt 63618 159 + 113034 AAGGGGAGGCCAC------------------AGGATGCAGACAAGGCCTCATCAGCGACC-----------ACTCCTC---C------CTCAGATCAGAGGTGGCCCTGAGGGTAA-------------------------CAGCGGGGAGCCACACTGG--------TGCAGAGAATG---CCAAGGAAGGG-AACTGGGAGGG--TGAGGCACCTCTGC-AAACAGTTCCCAAGG s panTro4.chr3 13812906 159 - 202329955 AAGGGGAGGCCAC------------------AGGATGCAGACGAGGCCTCATCAGTGACC-----------ACTCCTC---C------CTCAGATCAGAGGTGGCCCTGAGGGTAA-------------------------CAGCGGGGAGCCACACTGG--------TGCAGAGAATG---CCAAGGAAGGG-AACTGGGAGGG--TGAGGCACCTCTGC-AAACAGTTCCCAAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795539 163 - 202140232 AAGGGGAGGCCAC------------------AGGATGCAGACGAGGCCTCATCAGCGACC-----------ACTCCTC---C------CACAGATCAGAGGTGGCCCTGAGGGTAA-------------------------CAGCGGGGAGCCACACTGG--------TGCAGAGAATG---CCAAGGAAGGGAAACTGGGAGGGGTGGAGGCTCCTCTGCAAAACAGTTCCCAAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345836 159 - 123690457 AAGGGGAGGCCAC------------------AGGATGCAGATGAGGCCTCATCAGCGACC-----------ACTCCTC---C------CTCAGATCAGAGGTGGGCCTGAGGGTAA-------------------------TAGCGGGGAGCCACACTGG--------TGCAGAGAATG---CCAAGGAAGGG-AACTGGGAGGG--TGAGGCTCCTCTGC-AAACAGTTCCCAAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640428 136 + 192599291 AAGGGGAGGCCAC------------------AGGATGCAGATGAGGCCTCATCAGCGACC-----------ACTCCTC---C------CTCGGATCAGAGGTTGCCCTCAGGGTAA-------------------------CAGCGGGGAGC----------------------------------TGAAAGG-AAGTGGGAGGG--TGAGGCTCCTCTGC-AAACAGTTCCCAAGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284001 136 - 192460366 AAGGGGAGGCCAC------------------AGGATGCAGATGAGGCCTCATCAGCGACC-----------ACTCCTC---C------CTCGGATCAGAGGTTGCCCTCAGGGTAA-------------------------CAGCGGGGAGC----------------------------------TGAAAGG-AAGTGGGAGGG--TGAGGCTCCTCTGC-AAACAGTTCCCAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101139311 157 + 187378091 aaggggctGCCAC------------------GGGATGCAGACAAGGCCTAATCAGCAACC-----------ATTCCTCCCTC------CTCAGAGCGAAGCTGGGCCTGGGAGTAA-------------------------CCGTGGGTAGC--GGCTGG--------TGCTGGGTA------CCATGGAAGG-CGGGTGTGGGG--TGAGGCGCTGCTGC-AAAACGTTCCCAAGG i papAnu2.chr2 I 62274 C 0 s chlSab2.chr15 4942034 136 + 91754291 AAGGCGAGGCCAC------------------AGGATGCAGATGAGGCCTCATCAGCGACC-----------ACTCCTC---C------CTCAGATCAGAGGTTGCCTTCAGGGTAA-------------------------CAGCGGGGAGC----------------------------------TGAAAGG-AAGTGGGAGGG--TGAGGCTCCTCTGC-AAACAGTTCCCAAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92438140 157 - 98464013 aaGGGGCAGCCAC------------------AGGATGCAGACAAGACCTGACCAGCAACC-----------ACTCCTCCCTC------CTCAGAGCAGAGCGGGGCTTGAGGGTAA-------------------------CGGCGGGTAGC--AGCAGG--------TGCTGGGTA------CCATGGAAGG-CGCCTGTGGGG--TGCGGCGTCGCTGC-AGACAGTTCCCAGGG i calJac3.chr15 I 15700 C 0 s canFam3.chr34 24802270 226 - 42124431 AAGGCGAGGCCTCCTCGGCGAGCTGGGCCTGAGGGTAACGGCGGCCCTTCACCAGCAGCCGCCGGAGGGCAGCTCCCC---CTCACGGCCCAGAGCGGAGGGCCGGCCAGGGGTAAGGTTTTCCACGCGCACACCCTCCACCCCCGCGGACC----CTGGTCACCCTTTGCAGAGTCTGGCCTCTAGAAAAGG-CCCAGGCCACC--TGGAGTCCGTGTGC-ATACAATCCCCTGGG i canFam3.chr34 C 0 I 36937 a score=71999.000000 s hg38.chr3_KI270781v1_alt 63777 20 + 113034 GAGCGCCTCCACCTGGTGGC s panTro4.chr3 13813065 20 - 202329955 GAGCGCCTCCACCTGGTGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795702 20 - 202140232 GAGCGCCTCCACCTGGTGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14345995 20 - 123690457 GAGCGCCTCCACCTGGTGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640564 20 + 192599291 GAGCGCCTCCACCTGGTGGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284137 20 - 192460366 GAGCGCCTCCACCTGGTGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101139468 20 + 187378091 GAGCATCTCCCCCTGGTGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4942170 20 + 91754291 GAGCGCCTCCACCTGGTGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92438297 20 - 98464013 GAGCGCCTCCCCCTGGTGGC i calJac3.chr15 C 0 T 14951 s canFam3.chr34 24839433 20 - 42124431 GTACATGTTTCCCTGGTGGC i canFam3.chr34 I 36937 C 0 a score=175054.000000 s hg38.chr3_KI270781v1_alt 63797 70 + 113034 CACGACAGGAAGCAGCGGTTCCCTTTGCCAAGGACATGGCCAACAAGGAGTTAAGGTTTT-----------------------------ATACACACAG----- s panTro4.chr3 13813085 70 - 202329955 CACGAGAGGAAGCAGCGGTGCCCTTTGCCAAGGACATGGCCAACAAGGAGTTAAGGTTTT-----------------------------ATACACACAG----- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795722 72 - 202140232 CACGAGAGGAAGCAGCGGTGCCCTTTGCCAAGGACATGGCCAACAAAGAGTTAAGGTTTT---------------------------ACATACACACAG----- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346015 70 - 123690457 CACGAGAAGAAGCAGCAGTGCCCTTTGCCAAGGACATGGCCAACAAAGAGTTAAGGTTTT-----------------------------ACATACACAG----- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640584 70 + 192599291 CACGAGAGGAAGCAGCAGTGCCCTTTGCCAAGGACATGGTCAACAAGGAGTTAATTTTAC-----------------------------ACACACGCAC----- i rheMac3.chr2 C 0 I 4 s macFas5.chr2 103284157 70 - 192460366 CACGAGAGGAAGCAGCAGTGCCCTTTGCCAAGGACATGGTCAACAAGGAGTTAATTTTAC-----------------------------ACACACGCAC----- i macFas5.chr2 C 0 I 4 s papAnu2.chr2 101139488 69 + 187378091 CATCAGAGGAAGCGGCGGTGCTCTCTGCCAAGGACAAGGCC-GCGAGGAGTGAAGATTTT-----------------------------CCACATCCAG----- i papAnu2.chr2 C 0 T 61248 s chlSab2.chr15 4942190 70 + 91754291 CACGAGAGGAAGCAGCAGTGCCCTTTGCCAAGGACATGGTCAACCAGGGGTTAATTTTAC-----------------------------ACACACACAC----- i chlSab2.chr15 C 0 I 4 s calJac3.chr15 92423366 99 - 98464013 CATGAGAGGAAGCAGCGTTGCCCTCTACCAAGGACGAAGCCAACAAGGAGTTACGGTTTTTGcacacacacacacacacacacacacacacacacacac----- i calJac3.chr15 T 14951 C 0 s canFam3.chr34 24839453 73 - 42124431 CATGAGAGGAAGCTGCAATGTCTGCAGCCAGGGAAACACCCA--CAGGAGTTAAGGTTTT-----------------------------CCACCCACTTCCTAT i canFam3.chr34 C 0 C 0 a score=2468.000000 s hg38.chr3_KI270781v1_alt 63867 2 + 113034 AC- s panTro4.chr3 13813155 2 - 202329955 AC- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795794 2 - 202140232 AC- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346085 2 - 123690457 AC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640658 2 + 192599291 AC- i rheMac3.chr2 I 4 C 0 s macFas5.chr2 103284231 2 - 192460366 AC- i macFas5.chr2 I 4 C 0 s chlSab2.chr15 4942264 2 + 91754291 AC- i chlSab2.chr15 I 4 C 0 s calJac3.chr15 92423465 2 - 98464013 ac- i calJac3.chr15 C 0 C 0 s canFam3.chr34 24839526 2 - 42124431 -CC i canFam3.chr34 C 0 T 36959 e papAnu2.chr2 101139557 61248 + 187378091 T a score=247527.000000 s hg38.chr3_KI270781v1_alt 63869 92 + 113034 CAGCGGACCCCGGACC-CTCTGCATGTCAGAACCTGGAtaatgtagcttaagcttcaggatccctcccttacacaagtcccttctaaagccag s panTro4.chr3 13813157 92 - 202329955 CAGCGGACCCCGGACC-CTCTGCGTGTCAGAACCTGGAtaatgtagcttaagcttcaggatccctcccttacacaagtcccttctaaagccag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795796 92 - 202140232 CAGTGGACCCTGAACC-CTCTGGGTGTCAGAACCTGGAtaatgaagcttaagcttcaggacccctcccttacacaagtgccttctaaagccag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346087 92 - 123690457 CAGCGGACCCTGGACC-CTCTGGGTGTCAGAACCTGGAtaatgaagcttaagcttcaggacccctcccttacacaagtccctcctaaagccag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640660 92 + 192599291 CAGGAGACCCTGGACC-CTCTGGGTGTCAGAACCTGGAtaatgaagcttaagcttcaggacccctcccttgcacaagtcccttctaaagccag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284233 92 - 192460366 CAGGAGACCCTGGACC-CTCTGGGTGTCAGAACCTGGAtaatgaagcttaagcttcaggacccctcccttgcacaagtcccttctaaagccag i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4942266 92 + 91754291 CAGGAGACCCTGGACC-CTCTGGGTGTCAGAACCTGGAtaatgaagcttaagcttcaggatccctcccttgcacaggtcccttctaaAgccag i chlSab2.chr15 C 0 I 157 s calJac3.chr15 92423467 92 - 98464013 CAGCAGACCCTGGACC-CTCTGGGCATCAGAACCTGGAtaatgaagcttaagtatcaggacccctccctggcacaagtcgtttctaaagccgg i calJac3.chr15 C 0 C 0 s canFam3.chr34 24802569 93 - 42124431 CAGCTGCTCCCTGCCCGCCCCGGGCACCAGAAGCTGGATGGtgaagctgcagcttcagcagccatccgtttcacaagccccttctaaggcccg i canFam3.chr34 T 36959 C 0 e papAnu2.chr2 101139557 61248 + 187378091 T a score=57286.000000 s hg38.chr3_KI270781v1_alt 63961 41 + 113034 -ggagcagtcgta---------gcaaaatgctcattatggacatatatttt s panTro4.chr3 13813249 39 - 202329955 -ggagcagtcgta---------gcaaaatgttcattatggac--atatttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795888 41 - 202140232 -ggagcagtcgta---------gcaaaatgttcattatggacatatattgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346179 41 - 123690457 -ggagcagtcata---------gcaaaatgttcattatggacatatatttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640752 50 + 192599291 -ggagcagtcttagcaaaatgtgcaaaatgttcattatggacatatgtttc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284325 50 - 192460366 -ggagcagtcttagcaaaatgtgcaaaatgttcattatggacatatgtttc i macFas5.chr2 C 0 C 0 s calJac3.chr15 92423559 38 - 98464013 --gggcagtctta---------gcaaaatgtttattataaacatgtttt-- i calJac3.chr15 C 0 C 0 s canFam3.chr34 24802662 39 - 42124431 ggcaggggcctta---------gc-aaatgttca-tatggacataggttt- i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4942358 157 + 91754291 I e papAnu2.chr2 101139557 61248 + 187378091 T a score=369641.000000 s hg38.chr3_KI270781v1_alt 64002 141 + 113034 gtgcaaaatttgcaaaactaa----gatttttcatatcatctttcctaaagagggtcccac-aaattatatccgctttagacgccaaaaagtctatctttgaccctgATT-----------G-TCACATAGGGGCCACTTGGTCCAGAGC-TCTCTG-AA s panTro4.chr3 13813288 141 - 202329955 gtgcaaaatttgcaaaactaa----gatttttcatatcatctttcctaaagagggtcccac-aaattatatctgcttaagacgccaaaaagtctATCTTTGACCCCGATT-----------G-TCACATAGGGGCCACTTGGTCCAGAGC-TCTCTG-AA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13795929 141 - 202140232 gtgcaaaatttgcaaaactaa----catttttCCTATCATCTTCCCTAAAGAGGGTCCCACAAAATTATATCCGCTTTAGATGCCAAAAAG----TCTTTGACCCTGATT-----------GTTCACATAGGGGCCACTTTGTCCAGAGCTTCTCTGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346220 141 - 123690457 gtgcaaaatttgcaaaactaa----catttttcatatcatctttcctaaagagggtcccac-aaattatatctgctttagacgccaaaaagtctatctttgaccctgATT-----------G-TCACATAGGGGCCACTTGGTCCAGAGC-TCTCTG-AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103640802 141 + 192599291 gtgcaaaatgtgcaaaactaa----gatttttcatattatctttcctaaagagggtcccac-aaattatatctgctttagatgccagaaagtctatatttgaccctgATT-----------G-TCACATAGGGGCCACTTAGTCCAGAGC-TCTCTG-AA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284375 141 - 192460366 gtgcaaaatgtgcaaaactaa----gatttttcatattatctttcctaaagagggtcccac-aaattatatctgctttagatgccaaaaagtctatatttgaccctgATT-----------G-TCACATAGGGGCCACTTAGTCCAGAGC-TCTCTG-AA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4942515 141 + 91754291 GTGCAAAATGTGCAAAACTAA----GATTtttcatattatctttcctaaagagggtcccac-aaattatatctgctttagatgccaaaaagtctatatttgactctgATT-----------G-TCACATAGAGGCCACTTAGTCCAGAGC-TCTCTG-AA i chlSab2.chr15 I 157 C 0 s calJac3.chr15 92423597 151 - 98464013 gtgcaaaatttgcaaaactaa----gatttttcatattatctttcctaaagagggtcccac-aaattatatccgccttagatgccaaaaagtctatatccgaccctgATCCGACCCTGATGG-TCACATAGGGGCCACTTGGT-CAGAGC-TCTCTG-AA i calJac3.chr15 C 0 C 0 s canFam3.chr34 24802701 136 - 42124431 atacaaaatctgcgaaagtaagGGGGATTTT-------ATTTTTCCTAAAGAGGGT--CAT-AAACAGTGTCAACTTCAGACCGCACAATGTCTATATTTGACCCTGATG-----------A-TCGCATAGGGGCCACTTGGTCCAGAGC-TCTCTG-AA i canFam3.chr34 C 0 I 305 e papAnu2.chr2 101139557 61248 + 187378091 T a score=816.000000 s hg38.chr3_KI270781v1_alt 64143 5 + 113034 TAGGT s panTro4.chr3 13813429 5 - 202329955 TAGGt i panTro4.chr3 C 0 I 124 s ponAbe2.chr3 13796070 5 - 202140232 TAGCT i ponAbe2.chr3 C 0 I 52 s nomLeu3.chr11 14346361 5 - 123690457 TACGT i nomLeu3.chr11 C 0 I 190 s rheMac3.chr2 103640943 4 + 192599291 TAGG- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284516 4 - 192460366 TAGG- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4942656 4 + 91754291 TAGG- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92423748 5 - 98464013 TATGT i calJac3.chr15 C 0 C 0 e papAnu2.chr2 101139557 61248 + 187378091 T e canFam3.chr34 24802837 305 - 42124431 I a score=631036.000000 s hg38.chr3_KI270781v1_alt 64148 328 + 113034 Tttctttctttctttcttt----------------------------------------------------ct-----------------------------ttt---------ttttttt--gagac-agagtctcgctctg-tctcccaggctggagtgc-agtggtgtgatctca-gctctcggctcactacaacctctgcctcctgggttcaggcgatt-ctcttgtctcagcctcccaagtagctggga-ttacaggtgcctgccaacacgcccagctaatttttgt--atttttagta-gagatggggtttcacaatgttggccaggctggtctt-gaactcctgacctcgggtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccCTGAATAG s panTro4.chr3 13813558 330 - 202329955 tttctttctttctttcttt----------------------------------------------------tt-----------------------------ttt---------tttttttttgagac-agagtctcgctcta-tctcccaggctggagtgc-aatggtgtgatctca-gctctcggctcactgcaacctctgcctcctgggttcaggcgatt-ctcctgtctcagcctcccaagtagctggga-ttacaggcgcctgccaacacacccagctaatttttgt--atttttagta-gagatggggtttcgcaatgttggccaggctggtctt-gaactcctgacctcgggtgatccacctgcctcggcctcccaaagtgctgggatgacaggcgtgagccaccgcgcccagccCTGAATAG i panTro4.chr3 I 124 C 0 s ponAbe2.chr3 13796127 369 - 202140232 tttctttctttctttcttt----------------------------------------------------ctctctctctctctctctctctctttctttcttt---------ctttttttcaagacaagagtctcgctctattctcccaggctggagtgcaagtggtgtgatctcaggctctcggctcactgcaacttctgcctcctgggttcaggcgattcctcctgtctcagcctcccaagtagctgggatttacaggcacctgccaacacgcccagctaatttttgttattttttagtaggagatggggtttcgcaatgttggccaggctggtcttcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggggtgagccaccgcacccagccCTGAATAG i ponAbe2.chr3 I 52 C 0 s nomLeu3.chr11 14346556 326 - 123690457 tttctttctttctttcttt----------------------------------------------------ct-----------------------------ttc---------ttctttc----gac-agagtcttgctcta-tctcccaggctggaatgc-agtgatgtgatctca-gctctcagctcactgcaacctccgcctcccgggttcaggcgttt-cttctgtctcggcctcccaagtagctggga-ttacaggcacctgccaacacgctcagctaatttttgt--atttttagta-gagatggggattcgcaatgttggccaggctggtctc-gaacttctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggatttcaggcgtgagccaccgcgcccagccCTGAATAG i nomLeu3.chr11 I 190 C 0 s rheMac3.chr2 103640947 299 + 192599291 ------------------------------------------------------------------------------------------------------ttt---------ttttttt--gagac-agagtctcgctcta-tctcccaggctggagtgc-agtggtgtgatcttg--------gctcactgcaacctctgcctcccgggttcaagcgatt-ctcctgtctcagcctcccaagtagctggga-ttataggcgcctgccaccacactcagctaatttttgt--atttttagta-gagacggggtttcacaatgttggccaggctggtctc-gaactcctgacctcaggtgatccacctgcctcag-ctcccaaagtgttgagattacaggcatgagccaccgcgcccggccCTGAATAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284520 299 - 192460366 ------------------------------------------------------------------------------------------------------ttt---------ttttttt--gagac-agagtctcgctcta-tctcccaggctggagtgc-agtggtgtgatcttg--------gctcactgcaacctctgcctcccgggttcaagcgatt-ctcctgtctcagcctcccaagtagctggga-ttataggcgcctgccaccacactcagctaatttttgt--atttttagta-gagacggggtttcacaatgttggccaggctggtctc-gaactcctgacctcaggtgatccacctgcctcag-ctcccaaagtgttgagattacaggcatgagccaccgcgcccggccCTGAATAG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4942660 300 + 91754291 ------------------------------------------------------------------------t-----------------------------ttt---------ttttttt--gagac-agagtctcgctcta-tctcccaggctggagtgc-agtggtgtgatcttg--------gctcactgcaacctctgcctcccgggttcaagcgatt-ctcctgtctcagcctcccaagtagctggga-ttataggcgcctgccaccacactcagctaatttttgt--atttttagta-gagacggggtttcacaatgttggccaggctggtctt-gaactcctgacctcaggtgatccacctgcctcag-ctcccaaagtgttgagattacaggcatgagccaccgcgcccggccCTGAATAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92423753 377 - 98464013 --TGTTTGTTTGCTTGTTTTGACGAGAGTAAAACTCCATCTCAAAAAAAAAAGACTGAAAGTAGGGAGGGGCT-----------------------------TTTTAAAAAAAAttttttt--tagat---agtctcactctg-tcttccaagctggagtgc-agtggtacaatcttg--------gctcactgcaaccttcacctcctgggttcaagcgatt-ctcctgtcccagcctcccgagtagctggga-ttacaagtgcccaccaacacacccagctaagtttggt--atttttagta-gagacagggtttcgccatgttggccaggccagtctt-gaacccctgacctcagatgatccacctgcctcggcctcccaaagtgctgggattacaggcatgagcca-catgcccggccCTGAACAA i calJac3.chr15 C 0 C 0 e papAnu2.chr2 101139557 61248 + 187378091 T e canFam3.chr34 24802837 305 - 42124431 I a score=254759.000000 s hg38.chr3_KI270781v1_alt 64476 99 + 113034 GTTCTTTAACCCAAATTCCAGTGCTCACTCC-------CCGCTCCGTCCCCGGGAGGCTACACAGAGGACCCTGggagagcagcgtgcacca-gggtcagaga-caca s panTro4.chr3 13813888 106 - 202329955 GTTCTTTAACCCAAATTCCAGTGCTCGCTCCTCGCTCCCCGCTCCGTCCCCGGGAGGCTACACAGAGGACCCTGGGAGAGCAGTCTGCACCA-GGGTCagaga-caca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13796496 101 - 202140232 GTTCTTTAACCCAAATTCCAGTGCTTGCTCC-------CCACTCCGTCCCCGGGAGGCTGCACAGAGGACCCTGggagagcagtctgcaccaggggtcagagaccaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346882 99 - 123690457 GTTCTTTAACCCAAATTCCAGTGCTCGCTCC-------TCCCTCTGTCCCCGGGAGGCTGCACAGAGGACCctgggagagcagtctgcacca-gggtcagaga-caca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641246 98 + 192599291 GTTCTTTAACTCAAATTCCAGTGCTCATTCC-------CACCTCCCTCCGTGGGAGGCTGCACAGAGGA-CCCGGGAGAGcagtctgcaccg-gagtcagaga-cacg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284819 97 - 192460366 GTTCTTTAACTCAAATTCCAGTGCTCATTCC-------CACCTCCTTCCGTGGGAGGCTGCACAGAGGA-CCCGGGAGAGCAGTCtgcactg-gagtcagaga-c-ca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101078309 98 + 187378091 GTTCTTTAACTCAAATTCCAGTGCTcattcc-------cacctccctccctgggAGGCTGCACAGAGGA-CCCGGGAGAGCAGTCTGCACCG-GAGTCAGAGA-CACG i papAnu2.chr2 T 61248 C 0 s chlSab2.chr15 4942960 99 + 91754291 GTTCTTTAACTCGAATTCCAGTGCTCATTCC-------CGCCTCCCTCCCTGGGAGGCTGCACAGAGGACCCCGGGAGAGCAGTCtgcaccg-gagtcagaga-cacg i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92424130 98 - 98464013 GTTTTTTAACTCAAATTCCAGTGCCGGCTCT-------CACCTGCCTCCTCAGGAGGCTGCACAGAGGACCCTGGGAAAGCAGCCCACACTG-GGGTCagaga-c-ca i calJac3.chr15 C 0 C 0 e canFam3.chr34 24802837 305 - 42124431 I a score=82685.000000 s hg38.chr3_KI270781v1_alt 64575 27 + 113034 gg-ttcacag-ttcagagagatgt-aggtc s panTro4.chr3 13813994 27 - 202329955 gg-ttcacag-ttcagacagatgt-aggtc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13796597 30 - 202140232 ggtttcacagtttcagacagatgtaaggtc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14346981 27 - 123690457 gg-ttcacag-ttcagacagatgc-aggtc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641344 27 + 192599291 gg-ttcatag-ttcagacagatgt-aggtc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284916 27 - 192460366 gg-ttcatag-ttcagacagatgt-aggtc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101078407 27 + 187378091 GG-TTCATAG-TTCAGACAGATGT-AGGTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4943059 27 + 91754291 gg-ttcatag-ttcagacagatgt-aggtc i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92424228 27 - 98464013 gg-ctcacag-ttcagacacatgg-aggtc i calJac3.chr15 C 0 C 0 s canFam3.chr34 24803142 27 - 42124431 GG-TTTGTAG-GTCAGATAGATTT-TAGTC i canFam3.chr34 I 305 I 24 a score=138049.000000 s hg38.chr3_KI270781v1_alt 64602 47 + 113034 tacgt-cccacctctgtcactcactagctgtgtgttcctggtctctct s panTro4.chr3 13814021 47 - 202329955 tacgt-cccacctctgtcactcactaactgtgtgttcctagtctctct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13796627 48 - 202140232 tacatccccacctctgtcactcactagctgtgtgttcctagtctctct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347008 47 - 123690457 tacat-cccacctctgtcactcactagctgtgtgttcctagtctctct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641371 47 + 192599291 tatgt-cccacctctgtcactcactagctgtgtgttcctagtctctct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284943 47 - 192460366 tatgt-cccacctctgtcactcactagctgtgtgttcctagtctctct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101078434 47 + 187378091 TATAT-CCCACCTCtgtcactcactagctgtgtgttcctagtctctct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4943086 47 + 91754291 tatgt-cccaccactgtcactcactagctgtgtgttcctagtctctct i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92424255 42 - 98464013 tacgt-cccacccc-----atcactagctgtgtgttcctggtctctct i calJac3.chr15 C 0 C 0 e canFam3.chr34 24803169 24 - 42124431 I a score=1037768.000000 s hg38.chr3_KI270781v1_alt 64649 306 + 113034 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataataattgtgcatactcc--gggctgctgtgagaatacaatcagacaca-catggtaagtgctctgtttggtggctgacctgtaggaggcgctccaggaatggcggctACGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAGC-TCTATATATTAAGCATAT----AC-AAAATTGGC-AGTATTTCACTGTTTTTTCAACTTATAAAAATA-GCGGTTTCACATGATTTCCCCTAATAGAACAAGTGacaaaaat s panTro4.chr3 13814068 306 - 202329955 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataataattgtgcatactcc--gggctgctgtgagaatacaatcagacaca-catggtaagtgctctgtttggtggctgacctgtaggaggcgctccaggaatggcggctACGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAGC-TCTATATATTAAGCATAT----AC-AAAATTGGC-AGTATTTCACTGTTTTTTCAACTTATAAAAATA-GCGGTTTCACATGATTTCCCCTAATAGAACAAGTGACAAAAAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13796675 311 - 202140232 gtgcctctctttcttcacctg----------------------taaagt-------------------------------------------gggggataataattgtgcatactcc-ggggctgctgtgagaatagaatcaggcaca-cacggtaagtgctctgtatggtggctgacctgtaggaggcgctccaggaatggtggctATGGGAAAGATTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAGCATCTATATATTAAGCATAT----ACAAAAATTGGCGAGTATTTCACTG-TTTTTCAACTTATAAAAATAGGCGGTTTCACATGATTTCCCCTAATAGAACAAGTGACAAAAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347055 300 - 123690457 gtgcctctctttcttcacctg----------------------taaaa---------------------------------------------gggggtaataattgtgcatactcc--gggctgctgtgagaatagaat----caca-cacggtaagtgctctgtttggtggctgacctataggaggcgctccaggaatggcggctatGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAGC-TCTATATATTAAGTATAT----AC-AAAATTGGC-AGTATTTCACTG-TTTTTCAAATTATAAAAATA-GCGGTTTCACATGATTTCCCCTAATAGAACAAGTGACAAAAAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641418 305 + 192599291 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataataattgtgcatactcc--aggctgccgtgagactagaatcagataca-catggtaagtgctctgtttggtggctgacctgtaggaggcgctccaggaatggcggctaCGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAAC-TCTATATATTAAGTACAT----AC-AAAATTGGC-AGTATTTCACTG-TTTTTCAACTTATAAAAATA-GTGGTTTCACATGATTTCCCCTAATAGAACAAGTGACAAAAAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103284990 305 - 192460366 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataacaattgtgcatactcc--aggctgccgtgagactagaatcagataca-catggtaagtgctctgtttggtggctgacctgtaggaggcgctccaggaatggcggctACGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAAC-TCTATATATTAAGTACAT----AC-AAAATTGGC-AGTATTTCACTG-TTTTTCAACTTATAAAAATA-GTGGTTTCACATGATTTCCCCTAATAGAACAAGTGacaaaaat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101078481 305 + 187378091 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataataattgtGCATACTCC--AGGCTGCCGTGAGACTAGAATCAGATACA-CATGGTAAGTGCTCTGTTTGGTGGCTGACCTGTAGGAGGCGCTCCAGGAATGGCGGTTACGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAAC-TCTATATATTAAGTACAT----AC-AAAATTGGC-AGTATTTCACTG-TTTTTCAACTTATAAAAATA-GTGGTTTCACATGATTTCCCCTAATAGAACAAGTGACAAAAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4943133 305 + 91754291 gtgcctctctttcttcacctg----------------------taaaat--------------------------------------------ggggataataattgtgcatactcc--aggctgccgttagactagaatcagataca-catggtaagtgctctgtttggtggctgacctgtaggaggcgctccaggaatggcggctGCGGGAAAGGTTCATAAATAGATACCCTAAACTGGGAATACCTAT--TCCTAACTTAAATTCAAC-TCTATATATTAAGTACAT----AC-AAAATTGGC-AGTATTTCACTG-TTTTTCAACTTATAAAAATA-GTGGTTTCACATGATTTCCCCTAATAGAACAAGTGacaaaaat i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92424297 299 - 98464013 gtgcctatctttcttcacctg----------------------taaaat--------------------------------------------gaggataataattgtgcatactgt--aggctgctgtgagaatagaatcagacaca-cacggtaagtgctctgtttagtggctggcctgtaggaggcgctccaggaatgGCAGCTGTGGTAAAGGTTCATAAATAGATACCCTAAACTGGGA------AT--TCCTAACTTAAATTCAAC-GCTGTATATTAAGTACAT----AT-AAAATTGGC-AGTATTTCACTG-TTTTTCAACCTATAAAAATA-GTGGTTTCACGTGATTTCCCCTAATAGAACAAGTGACAAAAAT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24803193 379 - 42124431 GTGCCTCTCTTTCTTCACCTGAACAAGAAGGAAAATAtttttttaaaagatttgtttgtttatttattcatgagagacacagagagagagaggaagGAAAATAATTTTACTTCCTCTTGGGGATGCTGCGAGAATAGAATCCGAGAAAGCAAGGTAAGACCGCTGTTTGAGACCTGGCCTGTAGGGGGCGCTCGGGGAATACCGGCTGTGGG-AAGGTCCCTAAATCGCTACTCTAGTCTGGGAATACATATACCCCTAACTTAAACTCAGC-TCTCTATAttaagttgatccaaat-aaaattacc-agtatttcacgg-tttcctgacctccaaaaatg-gcagcttcacatgatccCCTTTGATAGAACAAACGACAATAAT i canFam3.chr34 I 24 I 891 a score=301384.000000 s hg38.chr3_KI270781v1_alt 64955 116 + 113034 ta-ctgggcatggtggctc-ctgctgtaatcccaacacttcaagaggctgaggtgggaggattgtttgatgccaggggttcgagaccagcctgggcaacataatgagaccccccc--------cg--a s panTro4.chr3 13814374 115 - 202329955 TA-ccgggcatggtggctc-ctgctgtaatcccaacacttcaagaggctgaggtgggaggattgtttgatgccaggggttcgagaccagcctgggcaacataatgagaccccCCC---------G--A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13796986 117 - 202140232 TACccgggcatggtggctctttgctgcaatcccaacacttcaagaggctgaggcaggaggactgtttgatgccaggggttcgagatcagcctgggcaacataatgagacccccta---------a--c i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347355 123 - 123690457 TA-ccgggcatgatggctc-ctgctgtaatcccaacacttcaagaagctgaggtggaaggattgtttgatgccaggtgtttgagaccagcctgggcaacataatgagacccccccgccgc-cctg--a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641723 116 + 192599291 TA-CTGTgcatggtggctg-ctgctgtaatcccaacacttcaagaggctaaggtgggaagattgtttgatgccatgggttcaagaccagcctgggcaacataatgagacacccca---------caa- i rheMac3.chr2 C 0 I 17 s macFas5.chr2 103285295 114 - 192460366 ta-ctgtgcatggtggctg-ctgctgtaatcccaacacttcaagaggctaaggtgggaagattgtttgatgccatgggttcaagaccagcctgggcaacataatgagacaccccg---------a--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101078786 114 + 187378091 TA-CTGTGCATGGTGGCTg-ctgctgtaatcccaacacttcaagaggctaaggtgggaagattgtttgatgccatgggttcaagaccagcctgggcaacataatgagacaccccg---------a--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4943438 114 + 91754291 ta-ctgtgcatggtggctg-ctgctgtaatcccaacacttcaagaggctaaggtgggaagattgtttgatgccatgggttcaagaccagcctgggcaacataatgagacaccccg---------a--- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92424596 123 - 98464013 TA-ctgggcatggtagctc-ctgctgtaattccaattctttgagaggctgaggtgggaggactgtttgatgccaggggttcgagaccagcctgggcaacacagtgagaccccCCCCCCCCGCCCA--- i calJac3.chr15 C 0 C 0 e canFam3.chr34 24803572 891 - 42124431 I a score=4911.000000 s hg38.chr3_KI270781v1_alt 65071 3 + 113034 ctc s panTro4.chr3 13814489 3 - 202329955 CTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13797103 3 - 202140232 ctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347478 3 - 123690457 ctc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103285409 3 - 192460366 cta i macFas5.chr2 C 0 I 28 s papAnu2.chr2 101078900 3 + 187378091 cta i papAnu2.chr2 C 0 I 22 s chlSab2.chr15 4943552 3 + 91754291 cta i chlSab2.chr15 C 0 I 21 s calJac3.chr15 92424719 3 - 98464013 CTC i calJac3.chr15 C 0 I 2 e rheMac3.chr2 103641839 17 + 192599291 I e canFam3.chr34 24803572 891 - 42124431 I a score=480057.000000 s hg38.chr3_KI270781v1_alt 65074 186 + 113034 cac--------acacacacaaaaTCAACGGCCAAGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTTGCTGGGAAAGG--GTGTCTATGCTTTGCCTGCGGAGGCTGCGGAGGCTGAGGAAGGTTGTTTAGTCTTCT-CCCTGGAGCCCCCTCTGTAACCATAAAGGCC-A----------CTGATAAAAGGG-CCCATCCCT s panTro4.chr3 13814492 186 - 202329955 CAC--------ACACACACAAAATCAACGGCCATGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTTGCTGGGAAAGG--GTGTCTGTGCTTTACCTGTGGAGGCTGCGGAGGCTGAGGAAGGTTGTTTAGTCTTCT-CCCTGGAGCCCCCTCTGTAACCATAAAGGCC-A----------CTGATAAAAGGG-CCCGTCCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13797106 180 - 202140232 cac--------acacacaaaaaATCAACGGCCAAGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTTGCTGGGAAAGG--GTGTCTGTGCTTTGC---------CTGCGGAGGCTGAGGAACATTGTTTAGTCGTCTCCCCTGGAGCCCCCTCTGTAACCATAAAGGCCAA----------CTGATAAAAGGGCCCCGTCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347481 185 - 123690457 cacgaaaaaaaaaaaaGAAAAAATCAATGGCCAAGTAGGATGGAGGTCACTGGGAGTGAGCCTCACTCCTCTAGCTAGGAAAGG--GTGTCTGTGCTTTGC---------CTGCGGAGGCTGAGGAAGGTTGTTTAGTCTTCT-CCCTGGAGCCCCCTCTGTAACCATAAAGGCC-A----------CTGATGAAAGGG-CCTGTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103641856 177 + 192599291 cac--------acacacacacaATCAATGGCCAGGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTCACTGGGAAGGG-TGAGTCTGTGCTTTGC---------CTGCAGAGGCTGAGGAAGGTTGTTTGGTTTTCT-CCCTGGAG-CCCCTCTGTAATCATAAAGGCC-A----------CTGATAAAAGGG-CCCCTCCCT i rheMac3.chr2 I 17 C 0 s macFas5.chr2 103285440 177 - 192460366 cac--------acacacacaAAATCAATGGCCAGGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTCACTGGGAAGGG-TGAGTCTGTGCTTTGC---------CTACAGAGGCTGAGGAAGGTTGTTTGGTTTTCT-CCCTGGAG-CCCCTCTGTAATCATAAAGGCC-A----------CTGATAAAAGGG-CCCCTCCCT i macFas5.chr2 I 28 C 0 s papAnu2.chr2 101078925 177 + 187378091 cac--------acacacacacaatcaatgGCCAGGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTCACTGGGAAGGG-TGAGTCTGTGCTTTGC---------ctgcggaggctgaggaaggttgTTTGGTTTTCT-CCCTGGAG-CCCCTCTGTAATCATAAAGGCC-A----------CTGATAAAAgag-cccctccct i papAnu2.chr2 I 22 C 0 s chlSab2.chr15 4943576 177 + 91754291 cac--------acacacacacaATCAATGGCCAGGTAGGATGCAGGTCACTGGGAGTGAGCCTCACTCCTCTCACTGGGAAGGG-TGAGTCTGTGCTTTGC---------CTGCGGAGGCTGAGGAAGGTTGTTTGGTTTTCT-CCCTGTAG-CCCCTCTGTAATCATAAAGGCC-A----------CTGATAAAAGGG-CCCATCCCT i chlSab2.chr15 I 21 C 0 s calJac3.chr15 92424724 186 - 98464013 CAC--------ACACACACAAAATCAATGGGCAGGTGGGATGCAGGTCATTGGGAGTGAGTCTCACTCCTCTAGCTGGAAAAGGGTGAGTCTGTGCTTTGC---------CTGCAGAGGCTGAGGAAGGTTGTTTG---TTCT-CCCTGGATCCCCCTCTGTGACCATAAAGAAA-ACCTTTGTAACCTGATAAAAGGG-CCCCTCCCT i calJac3.chr15 I 2 I 14544 e canFam3.chr34 24803572 891 - 42124431 I a score=704283.000000 s hg38.chr3_KI270781v1_alt 65260 351 + 113034 G-CCCTCCCTACTTTCAGTCttttttttttttttttttt---------------------------------gagaaggagtttcacgcttgttctcca-ggctggagtgcaatggggtgatc-----------------------------------------------------tcagctcactgcaacctctgc-cccccgggttcaagtgattctactgtctcagcctcctg-agtagctgggattacaggcacgtgccaccgtgcc--tagctaattttcata-tttttcatagagatggggtttc-atcatgttggccaggctggtctcgaactcctgacctcaggtgatccacccgccttgacctcccaaagtgctgggattacaggcatcagccactgcgcccagtcCCCTACTTTCAGTCTTAATGGAAGAGTGAC s panTro4.chr3 13814678 347 - 202329955 G-CCCTCCCTACTTTCAGTCttttttttttttttt-------------------------------------gagaaggagtttcactcttgttctcca-ggctggagtgcaatggggtgatc-----------------------------------------------------tcagctcactgcaacctctgc-cccccgggttcaagtgattctactgtctcagcctcctg-agtagctgggattacaggcacgtgccaccgtgcc--tggctaattttcata-tttttcatagagacagggtttc-gtcatgttggccaggctggtgccgaactcctgacctcaggtgatccacccgccttgacctcccaaagtgctgggattacaggcatgagccactgcgcccagtcCCCTACTTTCAGTCTTAATGGAAGAGTGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13797286 353 - 202140232 GACCCTCCCTACTTTCAGTCttttttttttttt---------------------------------------gagacagagcttcactcttgttctccagggctggagtgcaatggggcaatc-----------------------------------------------------tcagctcactgtaacctctgcacccccaggttcaagtgattctactgtctcagcctcctgtagtagctgggattacaggcacgtgccaccatgccgtgggctaattttcatattttttcatagagacgcagttttggtcatgttggccaggctggtctcgaactcctgacctcaggtgatccacctgccttggcgtcccaaagtgctgggattacaggcataagccactgcgcccagccCCCTACTTTCAGTCTTAATGGAGGAGTGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14347666 347 - 123690457 G-CCCTCCCTACTTTCAGTCttttttttttttttt-------------------------------------gagacggagtttcactcttgttctcca-ggctggagtgcaatggggcgatc-----------------------------------------------------tcagctcactgcaacctctgc-cccccatgttcaagtgattctactgtctcagcctcctg-agtagctgggattacaggcacgtgccaccgtgcc--tggctaattttcata-ttttttgtagagacggggtttc-gtcatgttggccaggctagtctcgggctcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattacaggcataagccactgcgcccagccCCCTACTTTCAGTCTTAATGGAGGAGTGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103642033 354 + 192599291 G-CCCTCCCTAGTTTCAGTCtttttttttttttttttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------tcaagtgattctcctgtctcagccttctg-agtagctgggattacaggcacgtgccactacgcc--tggctaattttcata-cttttagtagagatgaggtttc-gtcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccacggtgcccagccCTCTACTTTCAGTCTTAATGGAGGAGTGAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103285617 354 - 192460366 G-CCCTCCCTAGTTTCAGTCttttttttttttttttttt------------------------------tttgagacggagttttactctcattcccca-ggctggagtgcaatggggtgatc-----------------------------------------------------tcagctcactgcaacctctgc-ctcctgggttcaagtgattctcctgtctcagccttctg-agtagctgggattacaggcacgtgccactacgcc--tggctaattttcata-cttttagtagagatgaggtttc-gtcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccacagtgcccagccCTCTACTTTCAGTCTTAATGGAGGAGTGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101079102 344 + 187378091 g-ccctccctagtttcagtctttttttttttt----------------------------------------gagacggagttttactctcattcccca-ggctggagtgcaatggggtgatc-----------------------------------------------------tcagctcactgcaacctctgc-ctcctgggttcaagtgattctcctgtctcagccttctg-agtagctgggattacaggcacgtgccactacacc--tggctaattttcata-cttttagtagagatgaggtttc-gtcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccacggtgcccagccctcTACTTTCAGTCTTAATGGAGGAGTGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4943753 346 + 91754291 G-CCCTCCCTAGTTTCAGTCtttttttttttttt--------------------------------------gagacggagttttactctcattcccca-ggctggagtgcaatggggtgatc-----------------------------------------------------tcagctcactgcaacctctgc-ctcctgggtttaagtgattctcctgtctcagccttctg-agtagctgggattacaggcacgtgccactacgcc--tggctaattttcata-cttttagtagagatgaggtttc-atcatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggcatgagccacggtgcccagACCTCTACTTTCAGTCTTAATGGAGGAGTGAA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24803572 891 - 42124431 I e calJac3.chr15 92424910 14544 - 98464013 I a score=590869.000000 s hg38.chr3_KI270781v1_alt 65611 212 + 113034 CCAGGAAGGGCTCTTCGGCCCCCAACACTCCTTGAAACACTGCCCCTTGCTGTTGGTCT-CTGGGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTGTCTCAGTCCCTGGAACCTAGTCTAGAAGTCTCTCTTTCTTCATCTGACCCTTAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC s panTro4.chr3 13815025 212 - 202329955 CCAGGAAGGGCTCTTCGGCCCCCAACACTCCTTGAAACGCTGCCCTTTGCTGTTGGTCT-CTGGGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTGTCTCAGTCCCTGGAACCTAGTCTAGAAGTCTCTCTTTCTTCATCTGACCCTTAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13797639 212 - 202140232 CCAGGAAGGGCTCTTCTGCCCCCAACACTCCTTGAAACGCTGCCCCTTGCTGTTGGTCT-CTGGGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTGTCTCAGTCCCTGGAACCTAGTCTAGAAGTCTCTCTTTCTTCATCTGACCCTCAGGGAGGCAGGGGAGGATGTGGTGTGGAGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348013 212 - 123690457 CCAGGAAGGGCTCTTCTGCCCCCAACACTCCTTGAAACGCTGCCCCTTGCTGTTGGTCT-CTGGGGGCACCAGCTGCTCTCCGAGTGCAGCTCCCGTTTTGGAGGTGGTGGG--CTCTGTGACCACTTGCTATCTCGGTCCCTGGAACCTAGTCTAGAAGTCTCTCTTTCTTCATCTGACCCTCAGGGAAGCAGGGAAGGATGTGGTATGGAGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103642387 211 + 192599291 CCAGGAAGGGCTCTTCTGTCCCCAGTACTCC-TGCAACACTGCCCCTTGCTGTTGGTCT-CCGAGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTATCTCGGTCCCTGGAACCTAGTTGAGAAGTGTCTCTTTCTTCATCTGACCCTCAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103285971 211 - 192460366 CCAGGAAGGGCTCTTCTGCCCCCAGTACTCC-TGAAACACTGCCCCTTGCTGTTGGTCT-CCGAGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTATCTCGGTCCCTGGAACCTAGTTGAGAAGTGTCTCTTTCTTCATCTGACCCTCAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101079446 211 + 187378091 CCAGGAAGGGCTCTTCTGCCCCTAGTACTCC-TGAAACACTACCCCTTGCTGTTGGTCT-CCGAGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTATCTCGGTCCCTGGAACCTAGTTGAGAAGTGTCTCTTTCTTCATCTGACCCTCAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944099 210 + 91754291 TCAGGAAGGGCTCTTCTGCCCCGAGTACTCC-TGAAACACTG-CCCTTGCTGTTGGTCT-CCGAGGGCACCAGCTGCTCTCCGAGTGCAGCTCCTGTTTTGGAGGTGCTGGG--CTCTGTGACCACTTGCTATCTCGGTCCCTGGAACCTAGTTGAGAAGTGTCTCTTTCTTCATCTGACCCTCAGGGAAGCAGGGGAGGATGTGGTGTGGAGAC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24804463 209 - 42124431 CCACAGAGGGCTCCTCTG-CCCTGACATTC--TGACATGCTGTCCCCTGTCCCCAGTCTATCTGTGGCACCAGCTGCTCT-GGAACACAGCTCCTGTTTCGGAGGTGCTGGGGCTCTTGTGGCCTCTCCCCACCACAGCCCCTGGCACCTAATCCAAAAG--TCTCTTCCTTCATCTGGCCCTCAGGGAGGCAGGGGAGGGTCTGGTGGGAAGGG i canFam3.chr34 I 891 C 0 e calJac3.chr15 92424910 14544 - 98464013 I a score=781187.000000 s hg38.chr3_KI270781v1_alt 65823 260 + 113034 AACCAGGCCCACATGGAGTCCACACGGCAGAGTCCACACCTGACAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGAAAACCCTCTGGCTGCTGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACGTACTCGGAATTCTGGTCCC-ATAC-TCTAGAGAAC-ATACTCACACC---CAGCTGAGCTGGGCGTTCAGCTGGTCAGTAGGTCAGAC s panTro4.chr3 13815237 245 - 202329955 AGCCAGGTCCACATGGAGTCCACACGGCAGAGTCCACACCTGACAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCAAACCCTCTGGC---------------GTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACATACTCGGAATTCTGGTCCC-ATAC-TCTAGAGAAC-ATACTCATACC---CAGCTGAGCTGGGCGTTCAGCTGGTCAGTAGGTCAGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13797851 262 - 202140232 AGCCAGGCCCACATGGAGTCCACACGGCAGAGTCCACACCTGACAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCAAACCCTCCGGCTGCTGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACATACTCGGAATTCTGGTCCCAATACGTCTAGAGAAC-ATACTCATACC---CAGCTGAGCTCGGCGTTCAGCTGGTCAGTAGGTCAGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348225 260 - 123690457 AGCCAGGCCCACATGGAGTCCACACAGCAGAGTCCACACCTGACAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCATACCCTCTGGCTGCTGGGGCCTGAGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGTCCGCAGGTCCCATGCTC-T-AGAGAACATACTCGGAATTCTGGTCCC-ATAC-TCTAGAGAAC-ATACTCACACC---CAGTTGAGATGGGCGTTCAGCTGGTCAGTAGGTCAGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103642598 260 + 192599291 AGCCAGGCCCACATGTAGTCCACACGGCAGAGTCCACACCTGGCAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCATGCCCTCTGGCTGCAGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACATACTTGGAATTCTGGTCCC-ATAC-TCTAAAGAAC-ATACTCATACC---CAGCCAAGCTGGGCTTTCAGCTGGTCAGTAGGTCAGAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103286182 260 - 192460366 AGCCAGGCCCACATGTAGTCCACACGGCAGAGTCCACACCTGGCAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCATGCCCTCTGGCTGCAGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACATACTTGGAATTCTGGTCCC-ATAC-TCTAAAGAAC-ATACTCATACC---CAGCCAAGCTGGGCTTTCAGCTGGTCAGTAGGTCAGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101079657 260 + 187378091 AGCCAGGCCCACATGGAGTCCACACGGCAGAGTCCACACCTGGCAGCCAAAGTCCTCCAGCCAAAAAGCTGTCCCTGAGAATCACAAACTCACAAGCATGCCCTCTGGCTGCAGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCACAGGTCCCATACTC-T-AGAGAACATACTTGGAATTCTGGTCCC-ATAC-TCTAAAGAAC-ATACTCATACC---CAGCCAAGCTGGGCTTTCAGCTGGTCAGTAGGTCAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944309 260 + 91754291 AGCCAGGCCCACATGGAGTCCACACGGCAGAGTCCACACCTGGCAGCCAAAGTCCTCCAGCCAAAAAGCTATCCCTGAGAATCACAAACTCACAAGCATGCCCTCTGGCTGCAGGGGCCTGGGCGTCTCCTGTT----TATTTCCCAC--------CCAGTGGCCCGCAGGTCCCATACTC-T-AGAGAACACACTTGGAATTCTGGTCCC-ATAC-TCTAAAGAAC-ATGCTCATACC---CAGTCAAGCTGGGCTTTCAGCTCGTCAGTAGGTCAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92439454 233 - 98464013 AGCCAGGCCCAGATGGAGT-CACACTGCAGAGGCCCCACGTGGGGGCCAAAGTCCTCAGGCCCTGAAGGTGTCCCTGAGAATCACAAACGCACAATCA----CTGTGGCTGCTGGGG--------------------------CCCAT--------CCAGTGGCCTGCAGGTCCCATCCTTAC-AGGGAACACACTCAGAATTCTGGAGCC-TCTG-CCAGAGGCAC-A-GTTCAAACA---CGGCAGAGCTGAGCCTGTAGCTGGTCTGTCAGTCACAC i calJac3.chr15 I 14544 T 13539 s canFam3.chr34 24804672 264 - 42124431 AACCAAG-------GGCCTGCACACAGCAGAGGCCCTACCTGGCGGCC-AAGTGCTCCAGCC-TAAAGCTGTTCCTGAGAACCACAAACTCATAAACAT---CCCTAGCTGTTGGGGCCTGGGCTTCTCCTGTTGAACCATGTCCCCCTCATCCCTCCAGTGGCCCGCAGGCCGCATACTC-TCAGAGAACACACAAAGGATCCTATAGCC-CCCG-CCAGAGGCACGAAGCACAGTCCTGACAGCCAGGCTGGGTATCC-GCTAGTCAGTTGGTCAGAC i canFam3.chr34 C 0 C 0 a score=360275.000000 s hg38.chr3_KI270781v1_alt 66083 150 + 113034 CACAAACATGTAGGAAACAC--GTGCTGTTAAGACAGGTGTCTggctgggtgc----ggtagctcacgcctgtaatcccagcactttgggaagctgaggcaggtggatcacaaggtcag--gagttcaaga-ccaatctg------------------------------------------------a-ccaacatggtgaaacccc s panTro4.chr3 13815482 150 - 202329955 CACAAACATGTAGGAAGCAC--ATGCTGTTAAGACAGGTGTCTggccgggtgc----ggtagctcacgcctgtaatcccagcactttgggaagctgaggcaggtggatcacaaggtcag--gagttcaaga-ccaatctg------------------------------------------------a-ccaacatggtgaaacccc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13798113 152 - 202140232 CACAAACATGTAGGAAGCAC--AAGCTGTTAAGACAGGTGTCCggccgggcgc----ggtagctcacgcctgtaatcccagcactttgggaagccgaggcaggtggatcacaaggtcag--gagttcaagacccaacctg------------------------------------------------acccaacatggtgaaaccct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348485 150 - 123690457 CACAAACATGTAGGAAGCAC--GTGCTGTTAAGACAGGTGTCTggccgggcat----ggtagctcacgcctgtaatcccagcactttgggaagccaaggcaggtggatcacaaggtcag--gagttcaaga-ccaacctg------------------------------------------------a-ccaacatggtgaaacccc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103642858 150 + 192599291 CACAAACATGTAGGAAGCAT--GTGCTGTTAAGACGGGCGTCCggccgggcac----ggtggctcacacctgtaatcccagcactttgggaagctgaggcaggtggatcacaaggtcag--gaattcaaga-ccagcctg------------------------------------------------a-ccaacatggtgaaacccc i rheMac3.chr2 C 0 M 324 s macFas5.chr2 103286442 150 - 192460366 CACAAACATGTAGGAAGCAT--GTGCTGTTAAGACGGGCGTCCggccgggcac----ggtggctcacacctgtaatcccagcactttgggaagctgaggcaggtggatcacaaggtcag--gaattcaaga-ccagcctg------------------------------------------------a-ctaacatggtgaaacccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101079917 150 + 187378091 CACAAACATGTAGGAAGCAT--GTGCTGTTAAGATGGGCgtccggccgggcac----ggtggctcacacctgtaatcccagcactttgggaagctgaggcaggtggatcacaaggtcag--gaattcaaga-ccagcctg------------------------------------------------a-ctaacatggtgaaacccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944569 150 + 91754291 CACAAACATGTAGAAAGCAT--GTGCTGTTAAGACGGGCGTCTggccgggcac----ggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcag--gaattcaaga-ccagcctg------------------------------------------------a-ctaacatggtgaaacccc i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24804936 192 - 42124431 CACAATCAAGTAAAAAACACAAGTGCCCT-----CAGAGGTCAGAGGGGGTGCTCCAGGCAGACtgtgccagtgg----aggtctctgagaagcagaggccga-----cacagagttgggagagtgcaagg-ttcatcggcaagttatgtcatgaaagaaagggaggaaagtggtttggggagagacag-ccagcatggtacagacac i canFam3.chr34 C 0 I 6 e calJac3.chr15 92439687 13539 - 98464013 T a score=104177.000000 s hg38.chr3_KI270781v1_alt 66233 65 + 113034 gtctctact--------------------aaaaatacaaaaagtagccgggcatggtggtgcgtgcctgta-------at-cctag---------------ct-actca s panTro4.chr3 13815632 65 - 202329955 gtctctact--------------------aaaaatacaaaaagtagctgggcatggtggtgcatgcctgta-------at-cctag---------------ct-actca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13798265 67 - 202140232 gtctttact--------------------aaaaatacaaaaagtagctgggcatggtggtgcatgcctgta-------atccctag---------------ctaactca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348635 65 - 123690457 gtctttact--------------------aaaaatacaaaaagtagccgggcatggtagtgcgtgcctgta-------at-cctag---------------ct-actca i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103286592 65 - 192460366 atctctact--------------------aaaaatacaaaaagtagccaggcatggtggtgcatgcctgta-------at-cctgg---------------ct-aatca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101080067 65 + 187378091 atctctact--------------------aaaaatacaaaaagtagccaggcatggtggtgcatgcctgta-------at-cctgg---------------ct-aatca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944719 65 + 91754291 atctctact--------------------aaaaatacaaaaagtagccaggcatggtggtgcatgcctgta-------at-cctgg---------------tt-aatca i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24805134 107 - 42124431 gtttctgccaccccacgggatccccggaaaaagatgcccaaggtttcctattaggacagtctgtcactgggtagaaacat-ccagggcccattctctcatcct-gctca i canFam3.chr34 I 6 C 0 e rheMac3.chr2 103643008 324 + 192599291 M e calJac3.chr15 92439687 13539 - 98464013 T a score=386754.000000 s hg38.chr3_KI270781v1_alt 66298 175 + 113034 ---ggaagctgagg------caggagaatc---------gcttgaaaccgggaggtggaggttgcagtg-agcc--gag-atcacgcccc-tgcactctagcc-tgggagacagagcgagactcagtctcaaaa-----------------------aaaaaaaaa-----------GACAGGTGTCCTCCGAGATCAGAGAGGACTGTGCCATGCAGACtgtgtcagcggag s panTro4.chr3 13815697 182 - 202329955 ---ggaagctgagg------caggagaatc---------gcttgaaaccgggaggtggaggttgcagtg-agct--gag-atcacgcccc-cgcactctagcc-tgggagacagagcgagactctgtctcaaaa-----------------------aaaaaaaaa----aaaaaaaGACAGGTGTCCTCCGAGATCAGAGAGGACTGTGCCATGCAGACtgtgtcagcagag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13798332 179 - 202140232 ---ggaagctgagg------cagaagaatc---------gcttgaaaccaggaggtggaggttgcagta-agcc--gagaatcacgccccttgcactctagccttgggcaacagagcgagactcagtctcaaaa-----------------------aaaaaaaaa----------aGACAGGTGTCCTCCGAGATCAGAGAAGACTGTGCCATGCAGACTGTGTCAGCGgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348700 186 - 123690457 ---ggaagctgggg------caggagaatc---------gcttgaaaccaggagacggaggttgcagtg-agct--gag-atcacgcccc-tgcactcttgcc-tgggcgacagagcgagactcagtctcaaaa-----------------------aaaaaataaaaaaaaaaaaaGACAGGTGTCCTCCGAGATCAGAGAGGACTGTGCCATGCAGACtatgtcggcggag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103643334 181 + 192599291 ---ggaagctgagg------caggagaatt---------gcttgaatccaggaggtggaggttgcagtg-agct--gag-aacacgcccc-tgcactctagcc-tgggcgacagagtgagactccgtctcaaaa-----------------------aaaaaaaGA-----CAGGTAGACAGGTGTCCTCTGAGATCAGAGAGGACTGTGCCATGCAGACtgtgccggctgag i rheMac3.chr2 M 324 C 0 s macFas5.chr2 103286657 181 - 192460366 ---ggaagctgagg------caggagaatt---------gcttgaatccaggaggtggaggttgcagtg-agct--gag-aacacgcccc-tgcactctagcc-tgggcgacagagtgagactccgtctcaaaa-----------------------aaaaaaaGA-----CAGGTAGACAGGTGTCCTCTGAGATCAGAGAGGACTGTGCCATGCAGACtgtgccggctgag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101080132 204 + 187378091 ---ggaagctgagg------caggagaatt---------gcttgaatccaggaggtggaggttgcagtg-agct--gag-aacacgcccc-tgcactctagcc-tgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaagaaaaaaaagaaaaaaaga-----caggtaGACAGGTGTCCTCTGAGATCAGAGAGGACTGTGCCATGCAGACTGTGCCGGCTGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944784 187 + 91754291 ---ggaagctgagg------caggagaatt---------gcttgaatccaggaggtagaggttgcagtg-agct--gag-aacacgcccc-tgcactctagcc-tgggcgacagagtgagactccttctcaaaaaaaaaa-----------------aaaaaaaGA-----CAGGTAGACAGGTGTCCTCTGAGATCAGAGAGGACTGTGCCATGCAGACtgtgccggctgag i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24805241 161 - 42124431 gtcattggctgaggccaccccaggaagagcatgacctcagctcaaaagctgaagctggagatccctgggtagctcagag-gtttagcgcc-tgccttccactc---------agggcgtgatcctg------------------------------------gaga----------------------ctcgggatc---gagtgccgcatcaggctccctgcaccggtggag i canFam3.chr34 C 0 I 263 e calJac3.chr15 92439687 13539 - 98464013 T a score=474236.000000 s hg38.chr3_KI270781v1_alt 66473 203 + 113034 ttctctgagaagcagaggctgagacagagtcaggaatacccacgcctcattggtaagcaacgcctctgagaggaaagggaaggaaaggtgggtggggcagggagctgccagaccacagtgcagatgtgacaaagcttggccggccccaggggagccctggaacaaaggtgtccaagactttctgttagaagagtcgttcacag s panTro4.chr3 13815879 203 - 202329955 ttctctgagaagcagaggctgagacagagtcgggaatacccgcgcctcattggtaagcaacgcttctgagaggaaaggggaggaaaggtgggtggggcagggagctgccagaccacagtgcagatgtgacaaagcttggccagccccaggggagccctggaacaaaggtgtccaagacttcctgttagaagagtctttcacag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13798511 203 - 202140232 ttctctgagaagcagaggctgagacagagtcgggagtacccgcgcctcattggtaagcaacgcctcagagaggaaaggggaggaaaggtgagtggggcagggagctgccagaccacagtgcagatgtgacaaagcttggccagccccaggggagccctggaacaaaggtgtcgaagactttctgttagaagagtcgttcacaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14348886 193 - 123690457 ttctctgagaagcagaggctgagacagagtcgggaatacccgagcctcattggtaagcaacgcctccgag----------aggaaaggtgggtggggcagggagctgccagaccacagtgcagatgtgacaaagcttggccagccccaggggagccctggaacaaaggtgtccaagactttctgttagaagagtcgttcacag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103643515 203 + 192599291 ttctctgagaagcagaggctgagacggagtctggactacccaagcctcattggtaagcaacgcctgcgagaagaaaggggaggaaaggtgggtggcgcagggagctgccagaccacagcgcagatgtgacaaagctcagccagccccatgggagccctggaacaaaggtgtccaaggctttctgttagaagagttgttcataa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103286838 203 - 192460366 ttctctgagaagcagaggctgagacggattctggactacccaagcttcattggtaagcaacgcctgcgagaagaaaggggaggaaatgtgggtggcgcagggagctgccagaccacagcgcagatgtgacaaagctcagccagccccatgggagccctggaacaaaggtgtccaaggctttctgttagaagagttgttcataa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101080336 203 + 187378091 TTCTCTGAGAAGCAGAGGCTGAGACGGAGTCTGGACTACCCAAGCCTCATTGGTAAGCAACGCCTGCgagaagaaaggggaggaaaggtGGGTGGCTCAGGGAGCTGCCAGACCACAGCGCAGATGTGACAAAGCTCGGCCAGCCTCATGGGAGCCCTGGAACAAAGGTGTCCAAGGCTTTCTGTTAGAAGAGTTGTTCATAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4944971 203 + 91754291 ttctctgagaagcagaggctgagacggagtctggactacccaagcctcattggtaagcaacgcctgtgagaagaaaggggaggaaaggtgggtggttcagggagctgccagaccacagcacagatgtgacaaagctcggccagcctcatgggagccctggaacaaaggtgtccaaggctttctgttagaagagttgttcataa i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24805402 263 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1528853.000000 s hg38.chr3_KI270781v1_alt 66676 572 + 113034 ggcagaagcagcc---------aggcccttatcatcaagctcagtctctggctggggccacccctcgaagagcatgatctcagctcaaaagctgcagctgaccttgaacaccagcccagacgctgaggctgtcaactcatcacactcctcgcggctgggcagcaatactttctcaaaggagaatggagcagagcagccccatgtctgccacaGTCCACATGTCACGG---------TAATGTGGACACATGTGGggagcagctcccccagggatctggggggcctctg-------------tacaagagggaagttacgagcatgaaatagagacctcattcactgctactggcctcagggccaccactggtgc---ttggctccctcc---gctattccttctaaattgccctgccctcagctcccacctctgtcggccctcatggtctagctgtgggg-tgaccctagccctcattcttgatgagtctgagcccctggtaac--aaggaaaatgtcctgtccagaccctcctttgaggaaagatgtgctgcccagctgcaaggagtgtggttggcaggcagcctccagctgttggctttgtcaggatctg s panTro4.chr3 13816082 572 - 202329955 agcagaagcagcc---------gggcccttatcatcaagctcagtctctggctggggccacccctagaagagcatgatctcagctcaaaagctgcagctgaccttgaacaccagcccagaggctgaggctgtcaactcatcacactcctcgtggctgggcagcaatactttctcaaaggagaatggagcagagcagccccgtgtctgccacaGTCCACATGTCACGG---------TCATGTGGACACATGTGGggagcagctcccccagggatctggggggcctctg-------------tacaagagggaagttacgagcatgaaatagagacctcattcactgctactggcctcagggccaccactggtgc---ttggctccctcc---actattccttctaaattgccctgccctcagctcccacctctgtcggccctcatggtctagctgtgggg-tgaccctagccctcattcttgatgagtctgagcccctggtaac--aaggaaaatgtcctgtccagaccctcctttgaggaaagatgtgctgcccagctgtaaggagtgtggttggcaggcagcctccagctgttggcttcgtcaggatctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13798714 575 - 202140232 ggcagaagcagcc---------aggcccttatcatcaagctcagtctttggctggggccacccctagaagggcatgatctcagctcaaaagctgcagctgaccttgaacaccagcccagatgctgaggctgtcaactcatcacactcctcgcggctgggcagcaatactttctcaaaggagaatggagcagagcagccccgtgtctgccacaGTCCACATGTCATGG---------TCATGTGGACACATGTGGGGAGCAGCTCCCCCAGGGATCTGGGGGGCCTCTG-------------TACAAGAGGGAAGTTACGGGCATGAAACAGagacctcattcactgctaccggcctcagggccaccactggtgc---ttggctccctct---gctattctttctaaattgccctgccctcagctcccacctctgtcggccctcatggtctagctgtggggttgaccctagccctcattcttgatgagtctgagccCCTGGTAACAAAAGGAAAatgtcctgtccggaccctcctttgaggaaagatgtgctgcccaactgtaaggagtgtggttggcaggcagcctccagctgttggcttcgtcaggatctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14349079 572 - 123690457 ggcagaagcagcc---------aggcccttatcatcaagctcagtctctggctggggccacccctagaacagcatgatctcagctcaaaagccgtagctgaccttgaacaccagcccagatgctgaggctgtcaactcatcacactcctcgcggctgggcagcaatactttctcaaaggagaatggagcagagcagccccgtggctgccacaGTCCACATGTCACGG---------TCATGTGGACACATGTAGggagcagctcccccggggatctggggggcctctg-------------tacaagaggaaagttacggacatgaaatagagacctcattcactgctactggcctcagggccaccactggtgc---ttggctccctcc---gctattccttctaaattgccctgccctcagctcccacctctgtcggccctcatggtctagctgtgggg-tgaccctggccctcattcttgatgagtctgagcccctggtaac--aaggaaaatgtcctgtcctgaccctcctttgaggaaagatgtgcttcccaactgtaaggagtgtggttggcaggcagcctccagctgttggcttcgtcaggatctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103643718 571 + 192599291 ggcagaagcagct---------aggcccttatcatcaagctcagtctctggctggggccacccctagaagagcatgacctcagctcagaagctgcagctgaccttgaacaccagcccagatgctgaggctgtcaactcaccacactcctcgtggctggacagcaagactttctcaaaggagaatggagcagagcagatccgtgtctgccacaGTCCACATGCCACAG---------TCATGTGGACACCTGTGGggagcagctcccccggggatctggggggcctctg-------------taggagagggaagttatgggcgtgaaatagagacctcattcactgctactggcctcagggccaccactggtgc---ttggctccctcc---actaatccttgtaaatggccctgccctcagctcccacctctgtcagccctcatggtctagctgtgggg-tgaccctaggccttattcttgatgagtctgagcccctggtaac--aaggaaaacgtcctgtccagaccctcctttgaggaaagatgtgctgcccaactgtaaggagtgtggttggcagacagcctccag-tggtggcttcgtcaggatctg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103287041 571 - 192460366 ggcagaagcagct---------aggcccttatcatcaagctcagtctctggctggggccacccctagaagagcatgacctcagctcagaagctgcagctgaccttgaacaccagcccagatgctgaggctgtcaactcaccacactcctcgtggctggacagcaagactttctcaaaggagaatggagcagagcagatccgtgtctgccacaGTCCACATGCCACAG---------TCATGTGGACACCTGTGGggagcagctcccccggggatctgggggccctctg-------------taggagagggaagttacgggcgtgaaatagagacctcattcactgctactggcctcagggccaccactggtgc---ttggctccctcc---actaatccttgtaaatggccctgccctcagctcccacctctgtcagccctcatggtctagctgtgggg-tgaccctaggccttattcttgatgagtctgagcccctggtaac--aaggaaaacgtcctgtccagaccctcctttgaggaaagatgtgctgcccaactgtaaggagtgtggttggcaggcagcctccag-tggtggcttcatcgggatccg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101080539 571 + 187378091 GGCAGAAGCAGCT---------AGGCCCTTATCATCAAGCTCAGTCTCTGGCTGGGGCCACCCCTAGAAGAGCATGACCTCAGCTCAGAAGCTGCAGCTGACCTTGAACACCAGCCCAGATGCTGAGGCTGTCAACTCACCACACTCCTCGTGGCTGGACAGCAAGACTTTCTCAAAGGAGAATGGAGCAGAGCAGACCCGTGTCTGCCACAGTCCACATGCCACAG---------TCATGTGGACACATGTGGAGAGCAGCTCCCCCGGGGATCTGGGGGGCCTCTG-------------TAGGAGAGGGAAGTTACGGGCGTGAAATAGAGACCTCATTCCCTGCTACTGGCCTCAGGACCACCACTGGTGC---TTGGCTCCCTCC---ACTAATCCTTGTAAATTGCCCTGCCCTCAGCTCCCACCTCTGTCAGCCCTCATGGTCTAGCTGTGGGG-TGACCCTAGGCCTTATTCTTGATGAGTCTGAGCCCCTGGTAAC--AAGGAAAACGTCCTGTCCAGACCCTCCTTTGAGGAAAGATGTGCTGCCTGACTGTAAGGAGTGTGGTTGGCAGGCAGCCTCCAG-TGGTGGCTTCGTCGGGATCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4945174 571 + 91754291 ggcagaagcagct---------aggcccttatcatgaagctcagtctctggctggggccacccctagaagagcatgacctcagctcagaagctgcagctgaccttgaacactagcccagatgctgaggctgtcaactcaccacactcctctgggctggacagcgagactttctcaaaggagaatggagcagagcagacccgtgtctgccacaGTCCACATGCCATAG---------TCATGTGGACACATGTGGggagcagctcccctggggatctggggggcctctg-------------taggagagggaagttacaggcatgaaatagagacctcattccctgctactggcctcagggccaccactggtgc---ttggctccctcc---actaatccttgtaaattgccctgccctcagctcccacctctgtcagccctcatggtctagctgtgggg-tgaccctaggccttattcttgatgagtctgagcccctggtaac--aaggaaaacgtcctgtccagaccctcctttgaggaaagatgtgctgcccaactgtaaggagtgtggttggcaggcagcctccag-tggtggcttcgtcgggatctg i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24805665 552 - 42124431 gggagaagcaggctccacgcagagagcctgattgtgggactcaatcccggg--------acccc---aggatcatgccctgagccaaa-------ggcaggcgttaaac-----------cactgagccacccagggatcctctgcccttg----------------ccttcttgaaggagaagcaagcggcacagctctgtgtctgccataGTGCACA-gctgtagggacccatctctccccaacacatgtggggagcaggtccccttgggtgctggaggccctcttccttagggaaacctacaagaggg----taaagggacgacatgcagaccccattcaccacagctgatctcagggccacagatggcacccattgtctccctcctctgctgttcattctaacactcctccccctcagccagcacctctgctgtccc---aggttcacctgcagtg-agacacaagtcctggttcttgaggagtctgagcccctggtaac--aaggaagatggattgttcaga---ttcttcaagaaaagatgtgctg-ctaactgcaaggagtgtgcttacctgacagcctccagctgTCCGCTTCATCGGGGCTTG i canFam3.chr34 I 263 I 2867 e calJac3.chr15 92439687 13539 - 98464013 T a score=4159258.000000 s hg38.chr3_KI270781v1_alt 67248 1740 + 113034 cctcagtgttggagccaaggtcaccctattttgggagcaagccccagcccataactgagcacagtggcagtccaagggcctagcctttaccagtctttgcctggagccgccccactgggctggcagagattttgtcttatttgcatggccatctgagcctcccctcgcccaatcttgctttactccttttcttcacaggtgttactcctcaatcaaatgtctgctgcctaactctgtctcacacctgctttctaaagagctcaacCAAACATTTGGAACTGGGAGTGGTCCAagaaagcatccaccatggaagtggccaggccttcagtggacaaaatgactcagccagttgacagtagccagcctttgtcagtgcctaccccggtcccagcacaatgggcaatgaccgaggctatgtatgggcccaacaccatgaattcccacttaacaaggtcagtccagctcttgctgcctctgcatgtccaatctgccagcacagagatccatgctaagcctgtggtatggcactacttcttaaagagaccaaccagccacatggtggcaagttgtcttcactggaacccttctatcctagaaggtcagcag-ttttttctcacgagaatagacatctattctgggtataagtttgcctttctttcccataaggtctcaaccagcactgctatccaaaggcttatggaatgcctgattcacaggcatgtcatcccacacaacagagcatcTGTTATGCaaatgtacccaggattcgtattaaccagatatggccaaatatgcagacgtggaaatgactgtaatgaagaaggaagtctatcctcacagat-cctggaaacaggaggcacagcacaccatgcacggccacgtgaagaaggactgggattgatcaggaggcaaaagagaggtgagggcagagcgcagcccggagcctctatgggggttctcatggagagtagcagacaaggcagggtaggtatgctgagtccaggattggagagatgaaatcgttttggcaggccctgggctataaagagtgatccctgccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgaaaccatcctggctaacacggtgaaaccctgtctctactaaaaatac-aaaaaattagctgggcgtggtggcggacgcctgtagtcccagctactcgggaggctgaggcaggagaatgacgtgaacccgggaggcggagcttgcagtgagctgagatcgcatcactgcactccagcctgggcaaaagaggaagacgctgtctg---aaaaaaaaaaaaaaaaaaagag-----tgatccccaattgtttggtacacggccctggggtgatttagggc-gggggaatattggcttgatatatgagaatttgataaaggacacggttggggatgtggacttggattggttggttttcctatcaaggacgtgcttgcagggaggttgtttgctatttctaggagttagctagccctgagagaggcaggatcaagatcccaaatgccagaacaccaagaatacaaaagatgaggacgtgtagttaatGCagcatctgaccagggaattccctttacagcaaagtaaggccatgatcatgagatcactggtggtctcacctgccacaccatca-gaagctgccggcatgctagctctttgg-aatgacttgttggtggcaca s panTro4.chr3 13816654 1737 - 202329955 cctcagtgttggagccaaggtcatcctattgtgggagcaagccccagcccataactgagcacagtggcagtccaagggcctagcctttaccagtctttgcctggagacgccccactgggctggcagagattttgtcttatttgcatggccatctgagcctcccctcgcccaatcttgctttactccttttcttcacaggtgttactcctccatcaaatgtctgctgcctaactctgtctcacacctgctttctaaagagctcaacCAAACATTTGGAACTGGGAGTGGTCCAagaaagcatccaccatggaagtggccaggccttcagtggacaaaatgactcagccagttgacagtagccagcctttgtcagtgcctaccccggtgccagcacaatgggcaatgaccaaggctatgtatgggcccaacaccatgaattcccacttaacaaggtcagtccagctcttgctgcctctgcatgtccaatctgccagcacagagatccatgctaagcctgtggtatggtgctacttcttaaagagaccaaccagccacatggtggcaagttgtcttcactggaacccttctatcctagaaggtcagcag-ttttttctcacgagcatagacatctattctgggtataagtttgcctttctttcccataaggtctcaaccagcactgctatccaaaggcttatggaatgcctgattcacaggcatgtcatcccacacaacagagcatcTGTTATGCaaatgtacccaggattcgtattaaccagatatggccaaatatgcagacgtggaaatgactgtaatgaagaaggaagtctatcctcacagat-cctggaaacaggaggcacagcacaccatgcacggccacatgaagaaggactgggattgatcaggaggcaaaagagaggtgagggcagagcgcagcccagagcctctatgggggttctcatggagagtagcagacaaggcagggtaggtatgctgagtccaggattggatagatgaaatcgttttggcaggccctgggctataaagagtgatccctgactggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgaaaccattctggctaacacggtgaaaccctgtctctactaaaaatac-aaaaaattagctgggcgtggtggcggatgcctgtagtcccagctactcgggaggctgaggcaggagaatgacgtgaacccgggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgagcaaaagaggaagacgctgtctg---aaaaaaaaaaaaaaaa---gag-----tgatccccaattgtttggtacatggccctggggtgatttagggc-gggggaatattggcttgatgtatgagaatttgataaaggacatggttggggatgtggacttggattggttggttttcctatcaaggacgtgcttgcagggaggttgtttgctatttctaggagttagctagccctgagagaggcaggatcaagatcccaaatgccagaacaccaagaatacaaaCGATGAGGACGTGTAGTTAATGCagcatctgaccagggaattccctttacagcaaagtaaggccatgatcatgagatcactggtggtctcacctgccacaccatca-gaagctgccggcatgctagctctttgg-aatgacttgttggtggcaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13799289 1738 - 202140232 cctcagtgttggagccaaggtcaccctattttgggagcaagccccagcccataactgagcacggcggcagtccaagggcctagcctttaccagtctttgcctggagccaccccactggtctggcagagattttgtcttatttgcatggccatctgagcctccccttgcccaatcttgctttactccttttcttcacaggtgttactcctcaatcaaatgtctgctgcctaactctgtctcacacctgctttctaaagagctcaaccAAATATTTGGAACTGGGAGTGGACCAAGAAAGCATCCACCATGGaagtggccaggccctcagtggacaaaattactcagccagttgacagtagccagcctttgtcagtgcctaccccggtgccagcacaatgggcaatgaccgaggctatgtatgggcccaacagcatgaattcccacttaacaaggtcagtctagcttttgctgcctctgcatgtccaatctgccagcacagagatccatgctaagcttgtggtatggcgctacttcttaaagagaccaaccagccacatggtggcaagttgtctacactggaacccttctatcctagaaggtcagcag-ttttttctcatgagaatagacatctattctgggtataagtttgcctttctttcccataatgtctcaaccagcactgctatccaaaggattatggaatgcctgattcacaggcatggcatcccatacaacagagcatctgTTATGCaaatgtacccgggattcgtattaatcagatatggccaaatatgcagacatggaaatgactgtaatgaagaaggaagtttatcctcacagatccctggaaacaggaggcacagcacaccatgcaaggccacatgaggaaggactgggattgatcaggaggcaaaagagaggtgagggcagagcgcagcccagagcctctacgggggttctcatggaaagtagcagacaaggcagggtaggtatgctgagtccaggattggatagatgaaatcgttttggcaggccctgggctataaagagtgatccctgctgggcgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggagatcgaaaccatcctggctaacacagtgaaacactgtctctactaaaaatac-aaaaaattagctgggcgtggtggtggatgcctgtagtcccagctacttgggaggctgaggcaggagaatgacgtgaacccgggaggcggagcttgcagtgagctaagatcgcaccactgcactccagcctgggcaacagaggaagactccatctg---aaaaaaaacaaaa------gag-----tgatccctaattgtttggtacacggctctggggtgatttagggcagggggaatattggcttgatatgtgggagtttgataaaggacatggttgggggtatggactcggattggttggttttcctatcaaggatgtgcttgcagggaggttgtttgctatttctaggagttagctagccctgagagaggcaggatcaaggccccaaatgccagaacaccaagaatacaaaagatgaggacgagtagttaatGCAgcatctgaccagggaattccctttacagcaaagtaaggccatgatcatgagatcactggtggtctcacctgccgcaccatcacgaagctgccagcatgctagcgctttggcaatgacttgttggtggcaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14349651 1739 - 123690457 cctcagtgttggagccaaggtcaccctattttgggagcaagccccagcccataaatgagtgcagtggtggtccaagggcctagcctttaccagtctttgcctggagccgcccaactgggctggcagagattttgtcttatttgcatggccatctgagcctccccttgcccaatcttgctttactccttttcttcacaggtgttactcctcaatcaaatgtctgctgcctaactctgtctcacacctgctttttaaagagctcaacCAAACATTTGGAACTGGGAGTGGTCCAagaaagcatccaccatggaagtggccaggccctcagtggacaaaatgactcagccagttgacagtagccagcctttgtcagtgcctaccccggtgccagcacaatgggcagtgaccgaggctatgtatgggcccatcagcatgaattcccacttcacaaggtcagtctagctcctgctgcctctgcatgtccaatctgccagcacagagatccatgctaagcctgtggtatggtgctacttcttaaaaagaccaaccagccacatggtggcaagttgtctacactggaacgcttctatcctagaaggtcagcag-ttttttctcacgagaatagacatctattctgggtataagtttgcctttctttcccatagggtctcaaccagcactgctctccgaaggcttatggaatgcctgattcacaggcatgacatcccatacaacagagcatcTGTTATGCaaatgtacctgggatttgtattaaccagatatggccaaatatgcagacatggaaatgactgtaatgaagaaggaagtttatcctcacagatccctggaaacaggaggcacagcacaccatgcaaggccacatgaggaaggactgggattgatcaggaggcaaaagagaggtgagggcagagtgcagcccagagcctctatgggggttctcatgcagagtaacagacaaggcagggtaggtatgctgagtccaggattggatagatgaaatcgttttggcaggccctgggctataaagagtgatccctgccggccgtggtggctcacgcctgtaattccagcactttgggaggccgaggcaggcagatcacaaggtcaggagatcgaaaccatcctggctaacacggtgaaaccctgtctctactaaaaatgc-aaaaaattagctgggcgtggtggcagacgtctatagtcccagctactcggaaggctgaggcaggagaatgacgtgaacccaggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagaggaagactccgtttg---aaaaaaaaaaaaaaaa---gag-----tgatccctaagtgtttggtacacggccctggggtggtttagggcagggggaatattggcgtgatatgtgagaatttgataaaggacatggttgcgggtgtggacttggattggttggttttcctatcaaggatgtgcttgcagggagattgttggctatttctgggagttagctagccctgagagaggcaggatcaaggccccaaatgccagaacaccaagaatacaaaagatgaggacgtgtagttaatGCagcatctgaccagggaattccctttacagcaaagtaaggccatgatcatgagatcgctggtggtctcacctgctgcaccatca-gaagctgccagcatgctagtgctttgg-aatgacttgttggtggcaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103644289 1746 + 192599291 cctcagtgttggagccaaggtcaccctcttctgggagcaagccccagcccataactgagcacggtggcagtccaagggcctagcctttaccagtctttgcctggagtcgccccactgggctggcagagattttgtcttacttgcatggccatctgagcctccccctgctcaatcttgctttacgccttacattcacaggtgttactcctcaatcaaatgtctgctgcctcactctgtctcacgcctgctttctAAGGAGCACAACCAAACATTTGGAACTGGACGTGGTCCAagaaagcatcca-catggaa-tggccaggccctcagtggacaaaatgactcaggcagttgacagtagccagcctttgtcagtgcctaccctggtgccagcacaatgggcaatgaccgaggctatgtatgggcccaacagcatgaattctcacttaacaaggtcagtctagctcttgctgcctctgcatgtccaatctgccagcacagagatccatactaagcctatggtatggcgctacttcttaaagagaccaaccagccacatggtggcaagttgtctacacaggaacccttctatcccagaaggtcagcag-ttttttctcacaagaatagccatctattctgagtataggtttgcctttcttgcccataaggtctcaaccagcactactatctaaaggcttatggaatgcctgattcacaggcatggcatcccatacaacagagcatcTGTTATGCaaatgtaccccagatttgtattagccagatatggccaaacatgccgacatggaaatgcctgtaatgaagaaggaggtttatcctcacagatccctggaaacaggaagcacagcacaccatgcgaggccacatgaggagggactgggattggtcaggaggaaaaagagaggtgagggcagagcacagcccggagcctctacgggggttctcgcagagagcgacagacaaggtagggtaggtatactgagtccaggattgggtagatgaaatcatttcggcagactctgggctataaagagtgatctctgccgggtgcagtggctcacgcctgtaatcccagccctttgggaggccgaggtgggcggatcacgaggtcaggagatcaagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccgggtgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcagaagaatggtgtgaacccaggaagtggagcttgcagtgagacaagatcacgccactgcactccagcctggtcaaaagagcgagacactgtttcaaaaaaaaaaaaaaaaaaa---aagatccctaatccctaattgtgtggtccatggccctggggtgatttagggcagggggaatattggtttgatatgtgagaatttgataaaggacatggttgggggtgtggacttggattggttggttttcttatcaaggatgtgcttgcagggaggttgtttgctatttctaggagtcagctagccctgagagaggcaggatcaaggccccaaatgccaggacaccaagaatacaaaagatgaggaagcacagttaatGCagcatctgaccagggaattccctttacagcaaagtagggccatgatcttgagatcactggtggtctcacctgccgcaccatca-gaagctgccggcatactagcgctttgg-aatggcttgttggtggcaca i rheMac3.chr2 C 0 I 5387 s macFas5.chr2 103287612 1743 - 192460366 cctcagtgttggagccaaggtcaccctcttctgggagcaagccccagcccataactgagcacggtggcattccaagggcctagcctttaccagtctttgcctggagtcgccccactgggctggcagagattttgtcttacttgcatggccatctgagcctccccctgctcaatcttgctttacgccttacattcacaggtgttactcctcaatcaaatgtctgctgcctcactctgtctcacgcctgctttctaaggagcacaacCAAACATTTGGAACTGGACGTGGTCCAagaaagcatcca-catggaa-tggccaggccctcaatggacaaaatgactcaggcagttgacagtagccagcctttgtcagtgcctaccctggtgccagcacaatgggcaatgaccgaggctatgtatgggcccaacagcatgaattctcacttaacaaggtcagtctagctcttgctgcctctgcatgtccaatctgccagcacagagatccatactaagcctatggtatggtgctacttcttaaagagaccaaccagccacatggtggcaagttgtctacacaggaacccttctatcccagaaggtcagcag-ttttttctcacaagaatagccatctattctgggtataggtttgcctttcttgcccataaggtctcaaccagcactactatctaaaggcttatggaatgcctgattcacaggcatggcatcccatacaacagagcatcTGTTATGCaaatgtaccccagatttgtattagccagatatggccaaacatgccgacatggaaatgcctgtaatgaagaaggaggtttatcctcacagatccctggaaacaggaggcacagcacaccatgcgaggccacatgaggagggactgggattggtcaggaggaaaaagagaggtgagggcagagcacagcccggagcctctacgggggttctcgcagagagcgacagacaaggtagggtaggtatactgagtccaggattggatagatgaaatcatttcggcagactctgggctataaagagtgatctctgccgggtgcagtggctcacgcctgtaatcccagccctttgggaggccgaggtgggcggatcacgaggtcaggagatcaagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccgggtgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcagaagaatggtgtgaacccagaaagtggagcttgcagtgagccaagatcacgccactgcactccagcctgggcaaaagagcgagacactgtttc---aaaaaaaaaaaaaaaa---aagatccctaatccctaattgtgtggtccatggccctggggtgatttagggcaggggggatattggtttgatatgtgagaatttgataaaggacatggttgggggtgtggacttggattggttggttttcttatcaaggatgtgcttgcagggaggttgtttgctatttctaggagtcagctagccctgagagaggcaggatcaaggccccaaatgccaggacaccaagaatacaaaagatgaggaagcacagttaatGCagcatctgaccagggaattccctttacagcaaagtagggccatgatcttgagatcactggtggtctcacctgccgcaccatca-gaagctgccggcatactagcgctttgg-aatggcttgttggtggcaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101081110 1744 + 187378091 CCTCAGTGTTGGAGCCAAGGTCACCCTCTTCTGGGAGCAAGCCTCAGCCCATAACTGAGCACGGTGGCAGTCCAAGGGCCTAGCCTTTACCAGTCTTTGCCTGGAGTCGCCCCACTGGGCTGGCAGAGATTTTGTCTTACTTGCATGGCCATCTGAGCCTCCCCCTGCTCAATCTTGCTTTACACCTTGCATTCACAGGTGTTACTCCTCAATCAAATGTCTGCTGCCTCACTCTGTCTCACGCCTGCTTTCTAAGGAGCACAACCAAACATTTGGAACTAGACGTGGTCCAAGAAAGCATCTA-CATGGAA-TGGCCAGGCCCTCAGTGGACAAAATGACTCAGGCAGTTGACAGTAGCCAGCCTTTGTCAGTGCCTACCCTGGTGCCAGCACAATGGGCAATGACCGAGGCTATGTATGGGCCCAACAGCATGAATTCTCACTTAACAAGGTCAGTCTAGCTCTTGCTGCCTCTGCATGTCCAATCTGCCAGCACAGAGATCCATACTAAGCCTATGGTATGGCGCTACTTCTTAAAGAGACCAACCAGCCACATGGTGGCAAGTTGTCTACACAGGAACCCTTCTATCCCAGAAAGTCAGCAG-TTTTTTCTCACAAGAATAGCCATCTATTCTGGGTATAGGTTTGCCTTTCTTGCCCATAAGGTCTCAACCAGCACTACTATCTAAAGGCTTATGGAATGCCTGATTCACAGGCATGGCATCCCATACAACAGAGCATCTGTTATGCAAATGTACCCCGGATTTGTATTAGCCAGATATGGCCAAACATGCCAACATGGAAATGCCTGTAATGAAGAAGGAGGTTTATCCTCACAGATCCCTGGAAACAGGAGGCACAGCACACCATGCGAGGCCACATGAGAAGGGACTGGGATTGGtcaggagaaaaaagagaggtgAGGGCAGAGCACAGCCCGGAGCCTCTACGGGGGTTCTCGCAGAGAGCGACAGACAAGGTAGGGTAGGTATACTGAGTCCAGGATTGGATAGATGAAATCATTTCGGCAGACTCTGGGCTATAAAGAGTGATctctgccgggtgcagtggctcacacctgtaatcccagccctttgggaggctgaggtgggcggatcacgaggtcaggagatcaagaccatcctggataacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccgggtgtggtggcaggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccaggaagtggagcttgcagtgagccaagatcacgccactgcactccagcctgggcaaaagagcgagacactgtttc--aaaaaaaaaaaaaaaaa---atgatccctAATCCCTAATTGTGTGGTCCATGGCCCTGGGGTGATTTAGGGCAGAGGGAATATTGGTTTGATATGTGAGAATTTGATAAAGGACATGGTTGGGGTTGTGGACTTGGATTGGTTGGTTTTCTTATCAAGGATGTGCTTGCAGGGAGGTTGTTTGCTATTTCTAGGAGTCAGCTAGCCCTGAGAGAGGCAGGATCAAGGCCCCAAATGCCCGGACACCAAGAATACAAAAGATGAGGAAGCGCAGTTAATGCAGCATCTGACCAGGGAATTCCCTTTACAGCAAAGTAGGGCCATGATCTTGAGATCACTGGTGGTCTCACCTGCCGCACCATCA-GAAGCTGCCGGCATACTAGCACTTTGG-AATGGCTTGTTGGTGGCACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4945745 1743 + 91754291 cctcagtgttggagccaaggtcaccctattctgggagcaagccccagcccataactgagcacggtggcagtccaagggcctag-ctttaccagtctttgcctggagtttccccactgggctggcagagattttgtcttacttgcatggccatctgagcctccccctgctcaatcttgctttacgccttacattcacaggtgttactcctcagtcaaatgtctgctgcctcactctgtctcacgcctgctttctaaggagcacaacCAAACGTTTGGAACTGGACGTGGTCCAagaaagcatcca-catggaa-tggccaggccctcagtggacaaaatgactcaggcagttgacagtagccagcctttgtcagtgcctaccctggtgccagcacagtgggcaatgaccaaggctatgtatgggcccaacagcatgaattctcacttaacaaggtcagtctagctcttgctgcctccgtatgtccaatctgccagcacagagatccatactaagcctatggtatggcgctacttcttaaagagaccaaccagccacatggtggcaagttgtctacacaggaacccttctatcccagaaggtcagcagtttttttctcacaagaatagccatctattctgggtataggtttgcctttcttgcccataaggtctcaaccagcactactatctaaaggcttatggaatgcctgattcacaggcatggcatcccatacaacagagcatcTGTTATGCaaatgtaccccagatttgtattaaccagatatggtcaaacatgccgacatggaaacgcctgtaatgaggaaggaggtttatcctcacagatccctggaaacaggaggcacagcacaccatgcaaggccacatgaggagggactgggattggtcaggaggaaaaagagaggtgagggcagagcgcagtccggagcttctacgggggttctcgcagagagcgacagacaaggtagggtaggtatactgagtccaggattggatagatgaaatcattttggcagactctgggctataaagagtgatctctgccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagatcaagaccatcctggataacacggtgaaaccccgtctctactaaaaatataaaaaaattagctgggtgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccatgaagtagagcttgcagtgagccaagatcacgccactgcactccagcctgggcaaaagagcgagacaccgtttc---aaaaaaaaaaaaaaaa---aagatccctaatccctaattgtgtggtccatggccctggggtgatttagggcagggggtatattggtttgatatgtgagaatttgataaaggacatcgttgggggtgtggactcggattggttggttttcttatcaaggatgtgcttgcagggaggttgtttgctatttctcggagtcagctagccctgagagaagcaggatcaaggccccaaatgccaggacaccaagaatacaaaagatgaggaagcacagttaatGCagcatctgaccagggaattccctttacagcaaagtagggccatgatcttgagatcactggtggtctcacctgccgcaccatca-gaagctgctggcatactagcgctttgg-aatggcttgttggtggcaca i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=514622.000000 s hg38.chr3_KI270781v1_alt 68988 291 + 113034 gttggagtgctggcttggaggcaccatcctccagggcacagaatgctaactggatcagaaacctttatatgttgctacaacctcagtaggaagaacagatggacctaggaacaaaggagtt-aaaaagcaggagtgtagactgtgagtttctt--------aagaaaaaaagtaagagtggctcatttgccatcactcccaatgaccccctgggtgaactcgtgcttcccatccctgcacctctgggctccacaaagtcagaggtcttggtacccaaatggggctcactT-ATCACTACGA s panTro4.chr3 13818391 291 - 202329955 gttggagtgctggcttggaggcaccatcctccagggcacagaatgctaactggatcagaaacctttatatgttgctacaacctcagtaggaagaacagatggacctaggaacaaaggagtt-aaaaagcaggagtgtagactgtgagtttctt--------aagaaaaaaagtaagagtggctcatttgccatcactcccaatgaccccctgggtgaactcgtgcttcccatccctgcacctctgggctccacaaagtcagaggtcttggtacccaaatggggctcactt-atcactacga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13801027 291 - 202140232 gttggagtgctagcttggaggcaccatcctccagggcacagaatgctaactgaatcagaaacctttatatgttgctacaacctcagtaggaagaacagatggacctaggaacaaaggagtt-aaaaagcaggagtgtggactgtgagtttctt--------aagaaaaaaagtaagagtggctcatttgccatcactcccaatgaccccctgggtgaatttgtgcttcccatccctgcaactctgggctccacaaagtcagaggtcttggtaccgaaatggggctcactt-atcaccacga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14351390 292 - 123690457 gttggcgtgctggcttggaggcaccatattccagggcacagaatgctaactgaatcagaaacctttctatgttgctacaacctcagcaggaagaacagatggacccaggaacaaaggagtt-aaaaagcaggagtgtagactgtgagtttctt--------aagaaaaaaagtaagagtggctcatttgccatcactcccagtgaccccctgggtgaactcgtgcttcccatccctgcaactctgggctccacaaagtcagaggtcttggtacccaaatggggctcacttaaccaccacga i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103289355 295 - 192460366 gttggagtgctggcttggaggcaccatcctccagggcacagaatgctaactgaatcagaaatctttgtatgttgctaccacctcagtaggaagaacagatgga-ctaggaacaaaggagttaaaaaagcaggagtgtagACTGTGAGTTTCTT---AAAAAAGAAAAAAAAGTAAGAGTGGCGcatttgccatcactgccaatgaccccctgggtgaactcgtgcttcccatccc-acaactctgggctccacggagtcagagatcttggtaccccaatggggctcactt-atcaccacaa i macFas5.chr2 C 0 I 5408 s papAnu2.chr2 101082854 298 + 187378091 GTTGGAGTGCTGGCTTGGAGGCACCATCCTCCAGGGCACAGAATGCTAACTGAATCAGAAATCTTTGTATGTTGCTACCACCTCAGTAGGAAGAACAGATGGA-CTAGGAACAAAGGAGTTAAAAAAGCAGGAGTGTAGACTgtgagtttcttaaaaaaaaaaaaaaaaaagtaagagtggCGCATTTGCCATCACTGCCAATGACCCCCTGGGTGAACTCGTGCTTCCCATCCC-ACAACTCTGGGCTCCACGGAGTCAGAGATCTTGGTACCCCAATGGGGCTCACTT-ATCACCACAA i papAnu2.chr2 C 0 I 1855 s chlSab2.chr15 4947488 298 + 91754291 gttggagtgctggcttggaggcaccatcctccagggcacagaatgctaactgaatcagaaatcttcgtatgttgctaccacctcagtaggaagaacagatgga-ctaggaacaaaggagttaaaaaagcaggagtgtagACTGTGAGTTTCTTTaaaaaaaaaaaaaaaaaGTAAGAGTGGTGcatttgccatcactgccaatgaccccctgggtgaactcgtgcttcccatccc-acaactctgggctccacggagtcagagatcttggtaccccaatggggctcactt-atcaccacga i chlSab2.chr15 C 0 I 5667 e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=76300.000000 s hg38.chr3_KI270781v1_alt 69279 141 + 113034 CGAAcaggggccagactgttgattatgtgaagataagatgaggaccagcatctctgcagccttcagattcttaagtatggcattcatttccacctttccc-ctcagaatgtgatagatactgtttttgatatactgtttttt s panTro4.chr3 13818682 141 - 202329955 ggcacaggggccagactgttgattatgtgaagataagatgaggaccagcatctctgcagccttcagattcttaagtatggcattcatttccacctttccc-ctcagaatgtgatagatactgtttttgatacactgtttttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13801318 142 - 202140232 ggcacaggggccagactgttgattatgtgaagataagatgaggaccagcatctctgcagccttcagattcttaagtgtggcattcatttccacctttccctctcagaatgtgatagatactgtttttgatatactgtttttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14351682 141 - 123690457 ggcacaggggccagactgttgattatgtgaagataggatgaggaccagcatctctgcagccttcagattcttaagtatggcattcatttccacctttccc-ctcagaatgtgatagatactgtttttgatacactgtttttt i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4947786 5667 + 91754291 I e papAnu2.chr2 101083152 1855 + 187378091 I e macFas5.chr2 103289650 5408 - 192460366 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=499290.000000 s hg38.chr3_KI270781v1_alt 69420 618 + 113034 t-actgttttgtgtttttattctggct---ggtcagtggc-agtttcagaggattgtgtctgggctttaccgctctcatggcacttaacctataggca-aaggttccaatgtggaggttaccccaactaccaagtttgtcaatctct-gttccacaggcca-tcagatgagtctatgaacatcataacccccct-gtaagcagagttt-ttggc-caggactccatatgctctaaactaacagaggcaccatgataacac-ttcaggcctctggacagcaacatcaactcagactctgtgtccaactgtccttgaaatatctgaatattatcttggctgggcgtggtgacacatgcctgtaatcccaggacttaggtaggcagaggtaggtggatcacttgaggtcaggagttcaagaccaccctgggcaacatggtgaaaccccatctctaataaaaatacaaaaattagccaggtgtggtggtgctcacctgtaatcccagctactccagaggctgaggtgggagaatcacttgaacccaggagatggaggttgcagtaagccaagatcgcgccactgcactc-cagcctgggcaacacagtaagacgttgtctaaaaaaaaaaaaaaa s panTro4.chr3 13818823 619 - 202329955 ttactgttttgtgtttttattctggct---ggtcagtggc-agtttcagaggactgtgtctgggctttaccgctctcatggctcttaacctataggca-aaggttccaatgtggaggttaccccaactaccaagtttgtcaatctcc-gttccacaggcca-tcagatgagcctatgaacatcataaccccccc-gtaagcagagttt-ttggc-caggactccatatgctctaaactaacagagacaccatgataacac-ttcaggcctctggacagcaacatcaactcagactctgtgtccaactgtccttgaaatatctgaatattatcttggccgggcgtggtgacacatgcctgtaatcccaggacttaggtaggcagaggtaggtggatcacttgaggtcaggagttcaagaccaccctggccaacgtggtgaaaccccatctctaataaaaatacaaaaattagccgggtgtggtggtgcgcacctgtaatcccagctactccagaggctgaggtgggagaatcacttgaacccaggaggtggaggttgcagtaagccaagatcgcgccactgcactc-cagcctgggcaacagagtaagacattgtctaaaaaaaaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13801460 631 - 202140232 ttactgttttgtgtttttattctggctgtaggtcggtggcaagtttcagaggattgcgtctgggctttactgctgtcatggctcttaacctataggcncaaggttccaatgtggaggttacgccaactaccaagtatgccaatcttcagttccacaggccactcagatgagtctatgaacatcttaaccccccctgtaagcagagtttattggctcaggactccatatgctctaaactaacagaggcaccatgataacactttcaggcctctggacagcaacatcaactcagactctgtgtccaactgtccttgaaatgtctgaatattATCTTggccgggcatggtgacatatgcctgtaatcccaggacttaggtaggcagaggcaggtggatcacttgaggtcaggagttcaagaccaccctggccaacgtggtgaaaccccgtctttaataaaaatacaaaaattagccgggtgtggtggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaatcactggaacctgggaggaggaggttgcagtgagctgacatcacgccagtacactcgcagcctgggcgacagagtgagattctgtataaaaaaaaaaaaaaa i ponAbe2.chr3 C 0 I 1 s nomLeu3.chr11 14351823 620 - 123690457 t-actgttttgtgtttttattctggctgtaggtcggtggc-agtttcagaggattgcatctgggctttactgctctcatggctcttaacctataggcc-aaggttccaatgtggaggttactccaactaccaagtatgtcaatctca-gttccacaggcca-ccagacgagtctatgaacatcataacccccct-gtaagcagggttt-ttggc-caggactccatatgctctaatctgacagaggcaccatgataacac-ttcaggcctctggatagcaacatcaactcagactctgtgtccaactgtccttgaaatgtctgaatattatcttggccaggcatggtgacacatgcctgtaatcccagaacttaggtaggcagaggcaggtggatcacttgaggtcaggagttcaagaccaccctggccaacgtggtgaaaccctgtttctaataaaaatacaaaaattagccgggtgtggtggtgcacacctgtaatcccagctactccagaggctgaggtgggagaatcacttgaacccaggaggcagaggttgcagtgagccaagattacgtcactgcactc-cagcctgggcgacagagtaagaccttgtctaaaaaaaaaaaaaa- i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101085007 617 + 187378091 -tactgtTTCGtgcttttattctggctgtaGGTCGGTGGC-AGTTTCAGAGGATTGTCTCTGGGCTTTACCGCTGTCATGGCTCTTAACCTCTAGGCC-AAGGCTCCAATGTGGAGGTTACTCCAACTACCAAGTATGTCAATCTCA-GTTCCACAGGCCA-CCAGATGGGTCTATGAACATCATAACCCCCCT-GTAAGCAGGGTTT-TTGGC-CAGGGCTCCATATGCTCTAAGCTAACAGAGGCACCATGATAACAC-TTCAGGTCTCCGGATAGCAACATCAACTCAGACTCTGTGTCCAACTGTCCTTGAAATGTCTGAATAttatcttggccgggcgtggtgacacatccctgtaatcccaggact----taggctaaggcaggtagatcacttgaggtcaggagttcaagaccactctggccagcgtggtgaaaccccgtctctaataaaaatgcaaaaatgagccaggtgtggtggtgcttacccgtaatcccagctactccagaggctgaggtgggagaatcacttgaacccagggggtggaggttgcagtgagccaagatcgtgccactgcattc-cagcttaggcgacagagtaagaccttgtcaaaaaaaaaaaaaaaa i papAnu2.chr2 I 1855 C 0 e chlSab2.chr15 4947786 5667 + 91754291 I e macFas5.chr2 103289650 5408 - 192460366 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=329392.000000 s hg38.chr3_KI270781v1_alt 70038 661 + 113034 aaaa--------tctgagtattactcttttacccaggacatagcactatggtaaatgtaaggtcctttt-ggggaaggactgcagatatcattaaagtgcatacttgccatgatattgcaggattctcctatggttccaaccacctctgcagccaataggtcctgagtctgaaaactggctgaggttcagacactgggcaagggatcatgactttattggggcaactaccctcagcctcctgcttattaatttttggtcttttttgAATAcagttgtcccttggtatttgtgcagtattggttacaggacccctatggatgccaaaatccatggatgctcaagtccctgataataaaatggcacagtattggccaggcatggtggctcatgcctgtaatcccagcactttgggaggtcgaggtgggtggatctcgaggtcaggagttagagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtgggcacctgtaatcccagttacttgggaggctgaggcgggagaatcactggaacctgggaggcggaggttgcagtgagctgacatcacgccactacactctagcctgggcgacagagtgagactctgtttcaaaaaaagaaaaaaaaaaaa s panTro4.chr3 13819442 667 - 202329955 aaaaaaaaaaaatctgagtattacccttttacccaggatatagcactatggtaaatgtaaggtcctttt-ggggaaggactggagatatcattaaagtgcatacttgccatgatattgcaggattctcctatggttccaaccacctctgcagccaatagttcctgagtctgaaaactggctgagattcagactctgggcaagggatcatgactttattggggcaactaccctcagcctcctGCTTATTAATTTTCGGTCTTTTTTGAATAcagttgtcccttggtatttgtgcagtattggttacaggacccctatggatgccaaaatccatggatgctcaagtcgctgataataaaatggcacagtattggccaggcatggtggctcatgcctgtaatcccagcactttgggaggtcgaggcgagtggatctcgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgagcgtggtggtgggcacctgtaatcccagctacttaggaggctgaggcgggagaatcactggaacctgggaggcggaggttgcagtgagctgacatcacgccactacactctagcctgggcgacagagtgagactctgtctcaaaaaaagaaaaaaaaaa-- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14352443 655 - 123690457 -------------ctgagtattaccctttta-ccaggatatagcaccatcgtaaatgcaaggtccttctgggggaaggactggagatatcattaaagtgcatacttgccatgatattgcaggattctcctgtggttccagccacctccgcagccaatgggtcctgagtctgaaaactggctgaggtccagacactgggcaagggatcatgactttattggggcaactaccctcagcctcccgcttattaatttttggtcttttttgAATAcagttgtcccttggtatttgtgcagtattggttacaggacccttatggatgccaaaatccatggatgctcaagtccctgataataaaatggcacagtattagccaggcgtggtggctcatgcctgtaatcccagcactttgggaggtcaaagcgggtggatctcgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccctctctact-aaaatacaaaacttagccgggcgttgtggtgggcgcctgtaatcccagctacttgggaggctgaggaaagagaatcactggaacctgggaggcagaggttgcagtgaactgacatcacgccactacactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101085624 666 + 187378091 aaaaaaaaaaaatctgagtattATCCTTTTA-CCGGGATATAGTACCATGGTAAATGTAAGGTCCTTTT-GGGGAAGGACTGGGAATATCATTAAAGTGCATACTTGCCATGATATTGCAGGGTTCTTCAATGGTTCCAGCCACCTCCGCAGCCAACGGGTCCTGAGTCTGAAAACTGGCTGAGGTCCAGACACTGGGCAAGGGATCATGACTTTATTGGGGTAACTACCCTCAGCCTCTTGCTTATTAATTTTTGGTCTTATTTGAATACAGTTGTACCTTGGTATTTGGACAgtattggttccaggacccctatggataccaaaatccatggatgctcaagtccctgataataaaatggcacagtattggccaggcgcagtgactcatgcctgtaatcctagcactttgggaggtcaaggcgggtagatcttaaggtcaggagtttgagaccagcctggccaacctggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggtgggcgcctgtaatcccagct-cttgggaagctgaagcaagagaatcacttgaacctgggaggcagaggttgcagtgagctgacatcacgcca-tacactccagcctgggcgactgagtgagcctctgtctcaaaaaaaaaaaaaaaaaaaa i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13802091 1 - 202140232 I e chlSab2.chr15 4947786 5667 + 91754291 I e macFas5.chr2 103289650 5408 - 192460366 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1959032.000000 s hg38.chr3_KI270781v1_alt 70699 2398 + 113034 ggcacggtatttgcacacacctacacacatcctcctg-aatactttaaataatcccgagtac-ttataatacctaatataatgtaaatgctatgtaaatagtagttatactgtatttttaagggaataatgacaagaacaaaaaatgtctgtacatgttcggtgcagatgaa-tttttgttttcaatcttttgtggcaacagggtctcacca---tgttgcccaggctgatcttgaatgcctggtctccagcaatcctcctgcctcggcctcccaaagtgctgggattacaggtgtgagctactgcactcaaccACACAAAATTTAAAATATATATatattttccacccacaattggttgaatccacagatgcagaatctatggatacagagggccaactgTACTTCTATACATAACAGTtccctttgggctgcttgtctacttttccactggagacactgtgttctcttagccatctccataactgtctgaacatcaaacctctgtaattatcactctgaccttctctgctgctacagttgttctgacccctgtcttctgaccgctaagtgctgcgccctgctctctattgccccagccc-tatcc-------tctccagtacaatcagcaaaccaagttctgtgcctgcctctcccagcatcagtcctggcctgca-ggggagggccaccactgaacaacctagtcatgaccgtggcaaatggtgtgttcccctgtctccccatagaatcctattctcttttgcctaacatactgcctccattccaaatgcccacccactttcccaaggcttttgatccctttctctgccctcttccccggc---aatt---cagatatttcaacctcactcagcttgacctgccactttgtcc--------aggcttcaatgaacca-ccctagcagttatc-ttgcaccctccc---tggggtccttaccagggggttaaatcctgtgccttatagctcccttctccagtcccatgaagctctcagaatccaggcccacaagtactcccacagcctctgctggcacctgttgactagatcttacagctcctttggaatatagcacctttcctcctgtatccaactagcatatccccaggcaaactacgcaacgatttaacccagtagtaaagtctagctacccact-ggcaatgagggccacaccccaggagttaagtctagcagccagaagatgaggtgaaggcagctgcctagggacacctgttgccttgtaggggaaagacctctgccttgtcaggccgggtgccatggctcaggcctgtaatcccagtgctttgggaggccaaggagggcggatcacaagctcaagagatcaagaccatcctgaccaacatggtgaaaccctgt----attaaaaatac----aaaaattagctggacgtggtggcacgtgcctgtagtcccagctactgaggaagactgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagatcacac-cactgcactcca-gccaggcgacagagtgagactccatctcaaaaaaaaaaaa---agaaaaagacctct------------------------------------------------------------------------gcattgtcccccaacacagaggaggagggagtactctcatgtgtaggggatgagccacctctgcaggttctgagagccagagaagctcagggcttcagaatgttcaggggcacccacctcgaggtcccatcccatgtgtcggggtcccagagatctgaatcactagagcattcagccatctttggagtgcagccactctattaactcatggcttcatcttcagttccttttcttcaccgagcagaggacatgaaggattcttcatcagctgccaaagaaatcctctggctttcacacttagttttcaattgtttgttaattgccctcagcttttcattatgtgtctgtagatcaccaatgcaa-ttgttcatttccatgtatctatctataattcatata-ttCTatattcatatatattatacatcatataatatccatattgtataGAATGTTTTTCTCCCCTGTGTACC-TTTCAAATGCCTGACTT--ATCACATAAG-CCAG-TTCATT--CCCCTTCACTGGTACATTCTCCC-acgtcagcatcagtg-aaatgtttaacaat-agggccaccaa-cat-gtgctggggactttcca-tgctcAC-TTAACTCCT-GGGGCGTGGcctcattgccagttggtgg--tggagtgatccagcccccaaaccccgtcttaccaact--actttcttggaccactATT-GAAAACCCATAggcctggcacggtgggtcacacctgtaatccc-agcactatgagaggccaaggcgggtggatcacgaggtcaggagttcgggaccagcctggccagcatggtgaaaccccatctctactaaaaatac--aaaaattagctgg s panTro4.chr3 13820109 2390 - 202329955 ggcacggtatttgcacacacctacacacatcctcctg-aata-----aataatctcgagtac-ttataatacctaatataatgtaaatgctatgtaaatagtagttatactgtatttttaagggaataatgacaagaacaaaaaaagtctgtacatgttcggtgcagatgAA-TTTTTGttttcaatcttttgtggcaacagggtctcacca---tgttgcccaggctgatcttgaatgcctggtctcaagcaatcctcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcactcagccACACAAAATTTAAAATATATGTatattttccacccacaattggttgaatccacagatacagaatctatggatacagagggccaactATACTTCTATACATAACAGTtccctttgggctgcttatctatttttccactggagacactgtgttctcttagccatctccataactgtctgaacatcaagcccctgtaattatcactctgaccttctctgctgctacagttgttctgacccctgtcttctgaccactaagtgctgcgccctgctctctattgccccagccc-tatca-------tctccagtacaatcagcaaaccaagttctgtgcctgcctctcccagcatcagtcctggcctgca-ggggagggccaccactgaacaacctagtcatgaccgtggcaaatggtgtgttcccctgtctccccatagaatcctattctcttttgcctaacatactgtctccattccaaatgcccacccactttcccaaggcttttgatccctttctctgccctctgccccggc---aatt---cagatatttcaacctcactcagcttgacctgccactttgtcc--------aggcttcaatgaacca-ccctagcagttatc-ttgcaccctccc---tggggtccttaccagggggttaaatcctgtgccttatagctcccttctccagtcccatgaagctctcagaatccaggcccacaagtactcccgcagcctctgctggcacctgttgactagatcttacagctcctttggaatatagcacctttcctcctgtatccaactagcatatccccaggcaaactacgcaacaatttaacccagtagtaaagtctagctacccact-ggcaatgagggccacactccaggagttaagtctagcagccagaagatgaggtgaaggcagctgcctagggacacctgttgccttgtaggggaaagacctctgccttgtcaggccgggcgccatggctcaggcctgtaatcccagtgctttgggaggccgaggagggcggatcacaaggtcaagagatggagaccatcctgaccaacatggtgaaaccctgtctgtattaaaaatac----aaaaattagctggacgtggtggcacgtgcctgtagtcccagctactgaggaagactgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagatcacac-cactgcactcca-gccaggcgacagagtgagactccatctcaaaaaaaaaaaa----------gacctct------------------------------------------------------------------------gcattgtcccccaacacggaggaggagggagtactctcaagtgtaggggatgagccacctctgcaggttctgagagccagagaagctcagggcttcagaatgttcaggggcacccacctcgaggtcccatcccatgtgtcggggtcccagagatctgaatcgctagagcattcagccatctttggagtgcagccactctattaactcatggcttcatcttcagttccttttcttcaccgagcagaggacatgaaggattctttataagctgccaaagaaatcctctggctttcacacttagttttcaattgtttgttaattgccctcagcttttcattatgtgtctgtagatcaccaatgcaa-ttgttcatttccatgtatctatctataattcatata-ttctatattcatatatattatacatcatatattatccatattgtatagaatgtttttctcccctgtgtacc-tttcaaatgcctgactt--atcacataag-ccag-ttcatt--ccccttcactggtacattctctc-acatcagcatcagtg-aaatgtttaacaat-agggccaccaa-cat-gtgctggggactttcca-tgctcac-ttaactcct-gggacgtggcctcattgccagttggtgg--tggagtgatccagcccccaaaccccgtcttaccaact--actttcttggaccactATT-GAAAACCCATAggcccggcatggtgggtcacacctgtaatccc-agcactatgagaggccaaggcgggtggatcatgaggtcaggagttcaagaccagcctggccagcatggtgaaaccccatctctactaaaaatac--aaaaattagctgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13802092 2515 - 202140232 ggcacggtatttgcacacacctacacacatcctcctgaaatactttaaataatctcgagtactttataacacctaatataatgtaaatgctatgtaaatagtagttatactgtatttttaagggaataatgacaagaacaaaaaaagtgtgtacatgttcggtgcagatgAATTTTTTtttttcaatcttttgtggcaacagggtctcacca---tgttgcccaggctgatgttgaatgcctggtctcaagcaatcctcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcactcagccACACAAAATTTAAAATATATATattttttccacccacaattggttgaatccacagatgcagaatctatggatacagagggccaactgTACTTCTATACATAACAGTtccctttgggctgcttatctatttttccactggagacactgtgttctcttaaccatctccataactgtctgaacatcaaacccctgtaattatcactctgaccttctctgctgctacagttgttctgacccctgtcttctgaccactaagtgctgcgccctgctctctattgccccagcccatataaaaacaagtctccagtacaatcagcaaaccaagttctgtgcccgcctc------------tcctggcctgcagggggagggtcaccactgaacaacctagtcatgaccgtggcaaatggtgtgttcccctgtctccccatagaatcctattctcttttgcctaacatactgcctccattccaaatgcccacccactttcccaaggcttttgatccctttctctgccctctgccctggcccaaattacaaggatatttcaacctcactcagcttgagctgccactttgccctcacaggggagcttcaaggaaccacccctagcggttatcgttgcgaccctccgcgtggggtccttaccagggggtgaaatcctgtgccttacagctcccttctccagtcccatgaagctctcagaatccaggcccacaagtactcccgcagcctctgctggcacctgttgactagatcttacggctcctttggaatatagcccctttcctccagtatccggctagcatatccccaggcaaaccacgcaatgatttaacccagtagtaaagtctagctacccactgggcaatgaggaccacaccccaggagttaagtctagcagccagaagatgaggtgaaagcagctgcctagggacatctgttgccttgtaggggaaatacctctgccttgtcaggctgggcgccgtggctcaggcctgtaatcccagcgctttgggaggccgaggagggcagatcacaaggtcaagagatcgagaccatcctgaccaacatggtgaaaccctgtctctattaaaaatac----aaaaattagctggacgtggtggcacgtgcctgtagtcccagctactgaggaagactgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcacactcactgcactcca-gcctggcgacagagtgagactccgtctcaaaaaaaaaaaa---aaaaaaagacctcttgcattgtcccccaacacggaggaggaggggagtatcccctaagttgtaggggatgagcccacctcacctctgcattgtcccccaacacgggagaggaaggagtactctcaagtgtaggggatgagccacctctgcaggttctgagagccagagaagctcagggcttcagattgttcaggggcacccacctcgaggtcccatcccatgtgtcagggtcccagagatctgaatcgctagag----cagccatctttggagtgcagccactctattaactcatggcttcatcttcagttccttttcttcaccgagtagacgacatgaaggattcttcataagctgccaaagaaaccctctggctttcacacttagttttcaattgtttgttaattgccctcagcttttcattatgtgtctgtagatcaccaatgcaagttgttcatttccatgtatctatctataattcatatatttcGATATTCATATATATTATACATCATATATTATCCATATTGTATAGAATGTTTTTCTCCCCTGTGTACCTTTTCAAATGCCTGACTTTATCCACATAAGTCCAGTTTCATttcccctttcactggcacattctcccaacgtcagcatcagtgaaaatgtttaacagtaagggccaccaaccatggtgctggggactttcccttgctcacattaactcctgggggtgtggcctcattgccagttggtgggtggaagtgatccagcccccaaaccccgtctttccaacttgcttttcttggaccactattggAAAATCCATGggcctggcgcagtggctcatgcctgtaatccctagcactatgagaggccaaggcggtcggatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccatctctactaaaaatac-taaaaattagctgg i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 14353098 2391 - 123690457 agcacggtatttgcacacacctacacacatcctcctg-aatactttaaataatctcgagtac-ttataatacctaatataatgtaaatgctatgtaaatagtagttatactgtatttttaagggagtaatgaaaagaacaaaaaaagtccgtacctgttcggtgcagatgAA-TTTTTtttttcaatcttttgtagcaacagggtctcacca---tgttgcccaggctggtcttgaatgcctggtctcaagcagtcctcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcactcagccACACAAAATTTAAAAAATATATCtattttccacccacaattggttgaatccacagatgcagaatctacggatacagagggccaactgTACTTCTATACGTAACAGTTCCCTTTGGGCTGCTTatctgtttttccactggagacactgtgttctcttagccatctccataactgtctgaacatcaagcccctgtcattatcactctgaccttctctgctgctgcagttgttcagacccccatcttctgaccactaagtgctgccccctgctctctattgccccagcct-tatca-------tctccagtacaatcagcaaaccaagttctgtgcctgcctctcccagcatcagtcttggcctgca-gggg------------------cctagtcatgaccgtggcagatggtgtgttctcctgtctccccatagaatcttactctcttttgcctaacatactgcctccattccaaatgcccacccactttcccaaggcttttgatccctttctctgccctctgccctggc---aatt---cagatatttcaacctcactcagcttgagccgccactttgtcc--------aggcttcaaggagcca-ccctagcagtgatc-ttgcaccctccc--ttggggtccttaccagggggttaaatcctgtgctttatagctcccttcttcagtcccatgaagctctcagaatccaggcccacaagtactccggcagcctctgctggcacctgttgactagatcttacagctcctttggaatatagcccctttcctcctgtatccagctagcatatccccaggcaaaccacacaatgatttaacccagtagtaaagtctagctacccact-ggcaatgagggccacaccccaggagttaagtctagcagccagaagatgaggtgaaggcagctgcctaaggacacctgttgccttgtaggggaaagacctctgccttgtcaggccgggtgccgtggctcaggcctgcaatcccagcactttgggaggccgaggagggcagatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctact-cgggaggctgaggcaggagaatggcgtgaacccgggaggcggaggttgcagtgagtcgagatcgcgc-cattgcactccaggctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaagacctct------------------------------------------------------------------------gcattgtcccccaagatggaggaggagggagtactctcaagtgtaggggacgagccacctctgcaggttctgagagccagagaagcacagggcttcagaatgttcaggggtgaccaccttgaggtcccatcccatgtgtcggggtcccagagatctgaatcgctagagcattcagccatctttggagtgcagctgctctgttaactcatggcttcatcttcatttccttttcttcaccgagtagaggacacgaaggattcttcataagctgccaaagaaaccctctggctttcacacttagttttcaattgtttgttaattgccctcagcttttcattatgtgtctgtagatcaccaatgcaa-tcgttcatttccacgtatctatctataattcttata-ttctatattcatatatattatacatcatatattatccatattgtgtagaatgtttttctcccctgtgtacc-tttcaaatgcctgactt--atcacatagg-ccaa-ttcatt--ccccttcactggcacattctccc-acgtcagcatcagtg-aaatgtttaacaat-agagccaccaa-cat-gtgctggggactttcca-tgctcac-ttaaatcct-ggggtgtggcctcattgccagttggtgg--tggagtgatccagcccccaaaccctgtctgaccaact--gctttcttggaccactATT-GAAAACCCATGggtcgggcatggtggctcacacctgtaatccc-agcactttgagaggccaaggcgggtggatcacgaagtcaggagttcaagaccagcctggccagcatagtgaaa-cccatctctactaaaaatac--aaaaattagctgg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101086290 2383 + 187378091 gacatggtatttgcacacacctacacacatcctcctg-aatactttaaataatctcgagtac-ttataatacctaatataatgtaaatgctgtgtaaatagtagttatattgtatttttaagggaataatgacaggaaaaaaaaaagtctgtacatgttccgtgcagatgaa-ttttt-ttttcaatcttttgtagcaacggggtctcaccatgttgttgcccaggctggtcttgaacgcctggtctcaagcaatcctcctgcctcggcctcccaaagtattgggattacaggtgtgagccactgcacccagccacacgaaatttttaaaa-atatatattttccgcCCACAATttgttgaatccacagatgcagaatctACGGATACAGAGGGTCAACTGTACTTCTATACATAACAGTTCCCTTTGGGCTGCTTATCTA-TTTTCCACTGGAGACACTGTGTTCTCTTAGCCATCTCCATAACTGTCTGAACATCAAGCCCCTGTAATTATCACTCTGACCTTCTCTGCTGCTACAGTTGTTCTGACCCCTGTCTTCTGACCACTAAGTGCTGCCCCCTGCTCTCTATTGCCCCAGCCC-TATCA-------TCTCCAGTGCAATCAGCAAACCAAGTTCtgtgcctgcctctcccagcGTCAGTCCTGGCCTGCA-GGGGAGGACCACCACTGAACAACCTAGTCATGA-CGTGGCAAATGGTGTGTTCCCCTGTCTCCCCATAGAATCCTATTCTCTTTTGCCTAACATACTGCCTCCATTCCAAATGCCCACCCACTTTCCCAAGGCTTTTGATCCCTttctctgccctctgcctgggC---AATT---CAGATATTTCAACCTCACTCAGCTTGAGCTGCCACTTTGTCC--------AGGCTTCGAGGAGCCA-CCCTAACAGTGATC-TTGCACCCTCCT---TGGGGTCTTTACCAGGGGGTTAAATCCTGTGCTTTATAGCTCCCTTCTCTAGCCCCATGAAGCTCTCAGAATCCAGGCCCACAAATACTCCCGCAGCCTCTGCTGGCACCTATTGACTAGATCTTACAGCTCCTTTGGAATATAGCCTTTTTCCTCCTATATCCGGCTAGCATATCCCCTGGCAAACTACGCAATGATTTAACGCAGTAGTAAAGTCTAGCTAACCACT-GGCAATGAGGGCCACACCCCAGGAGTTAAGTCTAGCAGCCAGAAGATGAGGTGAAGGCAGTTGCCTAGGGACACCTGTTCCCTTGTAGGGGAAAGACCTCTGCCTTGTCAGGCc-agcgccgtggctcacacctgtaatcccagcactttgggaggccaaggagggcagatcacgaggtcaagaaatcgagaccatcctgaccaacatggtgaaaccccgtctctactaaaaatac----aaaaattagctgggcttggtggcacacgcctgtagtcccagctactggggaagactaatgcaggagaatcgcttgaacccaggaggcagaggttgcggtgagccaagatcacac-cactgcactcca-gcctggcgacagagtgagactccatctcgaaaaaaaaaaa----------gacctcg------------------------------------------------------------------------gCATTGTCCCCCAacatggaggaggagggagaactCTCAAGTGTAGGGAATGAGGCACCTCTGCAGGTTCTGAGAGCCAGAGAAGCTCAGGGCTTCAGAATGTTCAGGGGCACCCACTGCGAGGTCCCATCCCATGTGTCGGGGTCCCAGAGATCTGAATCGCTTGAGCATTCAGCCATCTTTGGAGTGCAGCCGC--------CTCATGGCTTCATCTTCAGTTCCTTTTCTTCACCGAGTAGAGGACATGAAGGATTCTTCATAAGCTGCCAAAGAAACCCTCTGGATTTCACACTTAGTTTTCAGTTGTTTGTTAATTGCCCTCAgcttttc---atgtgtctgtagaTCACCAATGcaa-ttgttcctttccatgtatctatctataattcatata-ttctatattcacatatattatatatcatctattatccatattgtatagaat-tttttttcccctgtgtaCC-TTTCAAATGCCTGACTT--ATCACATAGA-CCAG-TTCATT--CCCCCTCACTGGCACATTCTCCC-AGGTCAGCATCAGTG-AAATGTTTAACAAT-AGGGCCACCAG-CAT-GTGCTGGGGACTCTTCA-TGCTCAC-GTTACTCCT-GGGGTATGGCCTCATTGCCAGTTGGTGG--TGGAGTGATCCAGCCCCCAAACCCCATCTTACCAACT--GCTTTCTTGGACTACTGTT-GAAAACCCAtgggcccagcacggtggctcacacctgtaatccc-agcactttgggaggccgaggcaggtggatcatgaggtcagcagtttgagacaagcctggccagcatggtgaaaccccgtctctactaaaaatacaaaaaaattagccag i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4947786 5667 + 91754291 I e macFas5.chr2 103289650 5408 - 192460366 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=109921.000000 s hg38.chr3_KI270781v1_alt 73097 127 + 113034 gcat-ggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaaccctggaggtggaggttgtggtgagccgag--------attgaactccagcctgggcaatagagtgaaactc s panTro4.chr3 13822499 126 - 202329955 gcat-gatggcatgcacctgtaatcccagctactcgg-aggctgaggcaggagaattgcttgaaccctcgaggtggaggttgtggtgagccgag--------attgcactccagcctgggcaatagagtgaaactc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13804607 136 - 202140232 gcatgggtggcacgcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcgggagttgcggtgagccgagatggcaccattgcactccatcctaggcaacagagcgaaactc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14355489 135 - 123690457 gcat-ggtggcacacacctgtaatctcagctactcgggaggctgaggcaggaaaattgcttgaacccaggaggcggaggttgcggtgagccgagatggcaccattgcactccagcctaggcaatagagtgaaactc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295058 102 - 192460366 gcac-ggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacgag---------gtcagcagtt---------tgaga---------------caagcctggccagcatggtgaaaccc i macFas5.chr2 I 5408 C 0 s papAnu2.chr2 101088673 135 + 187378091 gcat-ggtggcgtacacctgtaatcccagctactcaggaggttgaggcaggagaattgctagaatccaggaggcagaggttgtagtgagctaagatcatgctactggactccagcctgggcgacagagcgagactc i papAnu2.chr2 C 0 I 204 e chlSab2.chr15 4947786 5667 + 91754291 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=74796.000000 s hg38.chr3_KI270781v1_alt 73224 149 + 113034 ----catcct-------------aaaaaaaaaaaaa--GAgcca-ggcgcagt-ggctcacacct-gtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtca-gagttcgagat-------------------------------cagcctggccaacgtggtgaaaccccgtctctactaaaaatgc-aa s panTro4.chr3 13822625 148 - 202329955 ----catcct-------------aaaaaaagaaaa---GAgcca-ggtgcggt-ggctcacacct-gtaatcccagcactttgggaggctgaggcaggtgtatcacctgaggtca-gagttcgagat-------------------------------cagcctggccaacatggtgaaaccccatctctactaaaaatac-aa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13804743 166 - 202140232 ----cattcttaaaaaaaaaaaaaaaaaaaaaaaaa--GAGCCAgggggcggtgggctcacacctggtaattccagcactttggaaggctgaggcaggtggatcacctaagatca-gagtttgagat-------------------------------cagcctggccaacatggtgaaaccccatctctactaaaaatacaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14355624 149 - 123690457 ----catctt-------------aaaaaaaaaaaa---aagcca-ggcgcagt-ggctcacacct-gtaatcccagcattttgggaggctgaggtaggtggatcacctgaggtcaggagttcgagat-------------------------------cagcctggccaacatggtgaaaccccgtctctactaaacagac-aa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295160 180 - 192460366 tgtctctact-------------aaaaatacaaaaaattagccg-ggcatggt-ggcgtacacct-gtaatcccagctactcaggaggttgaggcaggagaattgctagaatccaggaggcagaggttgtagtgagctaagatcatgctattggactccagcctgggtgacagagtgaga-ctcgtctcaa--aaaaat----- i macFas5.chr2 C 0 C 0 e chlSab2.chr15 4947786 5667 + 91754291 I e papAnu2.chr2 101088808 204 + 187378091 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=138054.000000 s hg38.chr3_KI270781v1_alt 73373 122 + 113034 aaattagccaggcatggtggtgcatgcttgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtaagcggagatcgcaccaccgcactcc s panTro4.chr3 13822773 122 - 202329955 aaattagccaggcatggtggtgcatgcttgtaattccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtaagtggagatcgcaccaccgcactcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13804909 121 - 202140232 aaattagccaggcatggtggtgcatg-gtgtaatcccagctaatcaagaggctgaggcagaagaatctcttgaacctgggaggcagagattgcagtgagcagagatcacaccaccccactcc i ponAbe2.chr3 C 0 I 187 s nomLeu3.chr11 14355773 122 - 123690457 aaattatctgggcatggtggtgcatgcttgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagcggagatcgtgccactgcactcc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295340 122 - 192460366 aaattagctggacatggtggcacgtgcctctagtctcagctactcaggaggctgaggcaggagaatcacttgaacgtcagaggtggagattgcagtgagctgagagcacaccactacactcc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953453 122 + 91754291 aaattagctggacatggtggcacgtgcctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaacgtcagaggtggagattgcagtgagctgagatcgcaccactgcactcc i chlSab2.chr15 I 5667 C 0 e papAnu2.chr2 101088808 204 + 187378091 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=23155.000000 s hg38.chr3_KI270781v1_alt 73495 42 + 113034 agtctgggcaacaaaagtgaaactccgtctcaacaaaaaaaa s panTro4.chr3 13822895 42 - 202329955 agtctgggcaacaaaagtgaaactccgtctcaacaaaaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14355895 41 - 123690457 ggtctgggcaacaaaagtgaaactccgtctcaa-aaaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295462 34 - 192460366 aacctgggcaacaagag------tccatctcaaaaaaaaa-- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953575 36 + 91754291 aacctgggcaacaagag------tccatctcaaaaaaaaaaa i chlSab2.chr15 C 0 I 20 e ponAbe2.chr3 13805030 187 - 202140232 I e papAnu2.chr2 101088808 204 + 187378091 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=3362.000000 s hg38.chr3_KI270781v1_alt 73537 27 + 113034 ggaaaaaaacaaacaaaCAAAAAACAa s panTro4.chr3 13822937 27 - 202329955 ggaaaaaaccaaacaaaCAGAAAACAa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14355936 27 - 123690457 gaaaaaaacaaaaacaaaaaAACCCAa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295496 17 - 192460366 agagagagagaaagaaa---------- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 13805030 187 - 202140232 I e chlSab2.chr15 4953611 20 + 91754291 I e papAnu2.chr2 101088808 204 + 187378091 I e rheMac3.chr2 103646035 5387 + 192599291 I e canFam3.chr34 24806217 2867 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1272.000000 s hg38.chr3_KI270781v1_alt 73564 3 + 113034 aat s panTro4.chr3 13822964 3 - 202329955 aat i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14355963 3 - 123690457 aat i nomLeu3.chr11 C 0 C 0 s canFam3.chr34 24809084 3 - 42124431 aac i canFam3.chr34 I 2867 C 0 e ponAbe2.chr3 13805030 187 - 202140232 I e chlSab2.chr15 4953611 20 + 91754291 I e papAnu2.chr2 101088808 204 + 187378091 I e macFas5.chr2 103295513 0 - 192460366 C e rheMac3.chr2 103646035 5387 + 192599291 I e calJac3.chr15 92439687 13539 - 98464013 T a score=74044.000000 s hg38.chr3_KI270781v1_alt 73567 44 + 113034 ggatgctgagatggagttaggaattcaaaactttcactggggag s panTro4.chr3 13822967 44 - 202329955 ggatgctgagatggagttaggaattcaaaactttcactggggag i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14355966 44 - 123690457 ggatgctgagatggagctaggaattcaaaactttcactggggag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103651422 44 + 192599291 Ggatgctgagatggagttaggaattcaaaactttcactggggag i rheMac3.chr2 I 5387 C 0 s macFas5.chr2 103295513 44 - 192460366 Ggatgctgagatggagttaggaattcaaaactttcactggggag i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953631 44 + 91754291 Ggatgctgagatggagttaggaatccaaaactttcactggggag i chlSab2.chr15 I 20 C 0 s canFam3.chr34 24809087 44 - 42124431 AGATGCTGAGTTGGAGCTAGGAGTGCCAGCCTCTCCCTGGAGCA i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13805030 187 - 202140232 I e papAnu2.chr2 101088808 204 + 187378091 I e calJac3.chr15 92439687 13539 - 98464013 T a score=581423.000000 s hg38.chr3_KI270781v1_alt 73611 306 + 113034 taggacttgtgaaaagaaagaggcggaagccagagtgggcagagagag--ccctctgattcggaggcag-actagctaaggtctctgactgcccagtgg-gaagct-ccggagcagatggttcattgggagtccagcattggga-ggaaataaccaggccattgtaacactgccttagtcatcactggggaggccaccctgcaaaggatatgatctcaactggaaagcagaggttgaccctaaaggagtctatagctggagctatcagctcatcatgtgccaggcagctgggcagtgagtcctttctcaaag s panTro4.chr3 13823011 306 - 202329955 taggacttgtgaaaagaaagaggcagaagccagagtgggcagagagag--ccctctgattgggaggcag-actagctaaggtctctgactgcccagtgt-taagct-cttgagcagattgttcattgggagtccagcattggga-ggaaatgactaggccattgtaacactgccttagtcgtcgttggggaggccaccctgcaaaggatatgatctcaactggaaagcagaggttgaccctaaaggagtctatagctggagctatcagctcatcacgtgctgggcagctgggcagtgagtcctttctcaaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13805217 311 - 202140232 TAGGacttgtgaaaa-aaagaggcagaagccagagtgggcagagagagccccctctgattcggaggcagcactagctaaggtctctgactgcccagtggcgaagctactggagcagattgttcattgggagtccagcagtgggacggaaatgaccaggccattgtaacactgccttagtcatcactggggaggccaccctgcaaaggatatgatctcgactggaaagcagaggttaaccctaaaggagtctatagctggagatatcagctcatcacgtgccaggcggctgggcagtgagtcctttctcaaag i ponAbe2.chr3 I 187 C 0 s nomLeu3.chr11 14356010 306 - 123690457 taggacttgtgaaaagaaagaggcagaagccagaatgggcagagagag--ccctctgattgggaggcag-actagctaaggtctctgactgcccagtgg-gaagct-ccagagcagattgttcattgggagtccagcattggga-ggaagtgaccaggccattgtaacactgccttagtcatcactggggaggccaccctgcaaaggatatgatctcaactggaaagcagaggttgaccctaaaggagtctatagctggagctatcagctcatcacgtgccgggcggctgagcagtgagtcctttctcaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103651466 306 + 192599291 taggacttgtgtaaagaaggaggcagaagctagagtagggagagagag--ccctctgattcggaggccg-actagctaaggcctctggctgcccagtgg-gaagct-ccagagcagattgtccattgggactccagcattggga-ggaaatgaccaggccattgtaacactgccttgttcatcactggggaggccaccctgcaaacgatatggtctaaactggaaagctgaggttgaccctgaaggagtctatagctggagctatcagctcatcatgtgccgggcagctgggcagtgagtcctttctcaaag i rheMac3.chr2 C 0 I 18 s macFas5.chr2 103295557 306 - 192460366 taggacttgtgtaaagaaggaggcagaagctagagtagggagagagag--ccctctgattcggaggccg-actagctaaggcctctggctgcccagtgg-gaagct-ccagagcagattgtccattgggactccagcattggga-ggaaatgaccaggccattgtaacactgccttgttcatcactggggaggccaccctgcaaacgatatggtctaaactggaaagctgaggttgaccctgaaggagtctatagctggagctatcagctcatcatgtgccgggcagctgggcagtgagtcctttctcaaag i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953675 306 + 91754291 taggacttgtgtaaagaaggaggcagaagccagagtagggagagagag--ccctctgattcggaggccg-actagctaaggcctctgactgcccagtgg-gaagct-ccagagcagattgtccattgggactccagcattggga-ggaaatgaccaggccattgtaacactgccttgttcatcactggggaggccaccctgcaaacgatatggtctaaactggaaagctgaggttgaccctgaaggagtctatagctggagctatcagctcatcatgtgccgggcagctgggcagtgagtcctttctcaaag i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24809131 230 - 42124431 TAAGACTTGTG---AGAAGGCAGCAGGCACCGGGGAAGGCGAGGAGAA--CTCGCTGGCTACAGCACAC-ACCTGCTCTGGTCTCTGCCTGCCCATTAG-AGAAGG-CCAG------------------------------------------------CCTTGTAACATta-------------------------cctgaaaatgatgtggcctcagct-gaaaactgagcttgattctgagggaggctacagacgaagctgtcagctcaccatactcttggcagcagcgcagtgagtattttctcaaag i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101088808 204 + 187378091 I e calJac3.chr15 92439687 13539 - 98464013 T a score=7851.000000 s hg38.chr3_KI270781v1_alt 73917 5 + 113034 aggta s panTro4.chr3 13823317 5 - 202329955 aggta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13805528 5 - 202140232 aggta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14356316 5 - 123690457 aggta i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103295863 5 - 192460366 aggta i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953981 5 + 91754291 aggta i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24809361 5 - 42124431 agctg i canFam3.chr34 C 0 C 0 e papAnu2.chr2 101088808 204 + 187378091 I e rheMac3.chr2 103651772 18 + 192599291 I e calJac3.chr15 92439687 13539 - 98464013 T a score=547078.000000 s hg38.chr3_KI270781v1_alt 73922 265 + 113034 tctaaggtgcatc------tctgccacaTTGACAATGACAAGACAATATGAGAACAGTTTCTGTGCAAGCCTGTGCA-----CAGTTGAACCA------TGTTTCTCTGGTTAGTAAAGAGGTGTTGGCtggaagtttaccaggaagataaggtgagaggggactttgcaggaaaagtggaccaaatattcaaagaccaaggcaatgcaaagcatgggtatgttctagaaaaatccaaagaatccagt-----ggagcagaaacataaatgttagcaaatgggagaa s panTro4.chr3 13823322 265 - 202329955 tctaaggtgcatc------tctgccacaTTGACAATGACAAGACAATATGAGAACTGTTTCTGTGCAAGCCTGTGCA-----CAGCTGAACCA------TGTTTCTCTGGTTAGTAAAGAATTGTTGGCtggaagtttaccaggaagataaggtgagaggggactttgcaggaaaagtggaccaaatattcaaagaccaaggcaatgcaaagcatgggtatgttctagaaaaatccaaagaatccagt-----ggagcagaaacataaatgttagcaaatgggagaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13805533 265 - 202140232 tctaaggtgcgcc------tcTGCCACACTGACAATGACAAGACAGAATGAGAACAGTTTCTGTGCAAGCCTGTGCA-----CAGCTGGACCA------TGTTTCTCTGGTGAGTAAAGAGGTGTTGGCtggaagtttgccaggaagataaggtgagaggtgactttgcaggaaaagtggaccaaacattcaaagaccaaggcaatgcaaagcatgggtatgttctagaaaaatccaaagaatccagt-----ggagcagaaacataaatgttagcaaatgggagaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14356321 265 - 123690457 tctaaggtgtgtc------tctgCCATATTGACAATGACAAGACAATATGAGAACAGTTTCTGTGCAAGCCTGTGCA-----CAGTTGAACCA------TGATTCTCTGGTTGGTAAAGAGGTGTTGGCtggaagtttaccaggaagataaggtgagaggggactttgcaggcaaagtggaccaaatattcaaagaccaaggcaatgcaaagcatgggtatgttctagaaaaatgcaaagaatccagt-----ggagcggaaacataaatgttagcaaatgggacaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103651790 280 + 192599291 TCTAAGGGGCATCTCTGTGTCTGCCACATTGACAATGACAAGACAATATGAGAACAGTTTCTGTGCAAGCCTGTGCA-----CAGTTGAACCATG--GTTGTTTCTCTGGTTAGTAACAAGGTGTTTGCtggaagtttaccaggaagataaggtgagaggggactttgcaggcaaaggggaccaaatgttcaaagaccaaggcaatgtaaagcatgggtatattctagaaaaatacaaagaatccagtggagcggagcagaaacataaatgttggcaaatgggagaa i rheMac3.chr2 I 18 C 0 s macFas5.chr2 103295868 280 - 192460366 tctaaggtgcatctctgtgtctgccacaTTGACAATGACAAGACAATATGAGAACAGTTTCTGTGCAAGCCTGTGCA-----CAGTTGAACCATG--GTTGTTTCTCTGGTTAGTAACAAGGTGTTTGCtggaagtttaccaggaagataaggtgagaggggactttgcaggcaaaggggaccaaatattcaaagaccaaggcaatgtaaagcatgggtatattctagaaaaatacaaagaatccagtggagcggagcagaaacataaatgttggcaaatgggagaa i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4953986 280 + 91754291 tctaaggtgcatctctgtgtctgccacaTTGACAATGACAAGAAAATATGAGAATAGTTTCTGTGCAAGCCTGTGCA-----CAGTTGAACCATG--GTTGTTTCTCTGGTTAGTAAAGAGGTGTTTGCtggaagtttaccaagaagataaggtgagaggggactttgcaggcaaaggggaccaaatgttcaaagaccaaggcaatgtaaagcatgggtatattctagaaaaatacaaagaatccagtggagcggagcagaaacataaatgttggcaaatgggagaa i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24809366 276 - 42124431 --acaggaacatctccaa-gcagccacaC-GACGATGGCAAGACCATCTGAGAGCTGTTTCTGTGCAAGCCTGAGCAGGGTGCGGTCAAACCGTGGAGCCATCTCTCCTGTTCAGAAAGTGGTGTtgggtaaaagtttaccaagaaggtaaggtaggaggagattttacagacggagggaaccaaatgtacacagaccaatgcaaggcaaagcatgggaatattccagaaaaat--agagaatctagt-----gaagctgaagcataAATACTGGCAGAAGGTAGAA i canFam3.chr34 C 0 I 7 e papAnu2.chr2 101088808 204 + 187378091 I e calJac3.chr15 92439687 13539 - 98464013 T a score=96607.000000 s hg38.chr3_KI270781v1_alt 74187 56 + 113034 tatggacatgaatgataaaggagacgagtaacacaggaccttttctgcctggccac s panTro4.chr3 13823587 56 - 202329955 tacggacatgaatgataaaggagacgagtaacacaggaccttttctgcctggccac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13805798 56 - 202140232 tacgggcatgaatgataaaggagacgagtaacacaggacctcttctgcctcgccac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14356586 56 - 123690457 tacggacatgaatgataaaggagacgggtaacacaggaccttttctgcctggccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103652070 56 + 192599291 tacaggcatgaatgataaaggggacgggtaacacaggaccctgtctgcctgaccat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103296148 56 - 192460366 tacaggcatgaatgataaaggggacgggtaacacaggaccctgtctgcctgaccat i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4954266 56 + 91754291 tacaggcatgaatgataaaggggacgggtaacacaggaccctgtctgcctgaccac i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101088808 204 + 187378091 I e canFam3.chr34 24809642 7 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=146690.000000 s hg38.chr3_KI270781v1_alt 74243 309 + 113034 agaagttcagattctgggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcagcagttcgagaccagcctgaacaatatggagaaaccccatctctactgaaaaaa-tacaaaaattag-ccaggtgtggtggtgcacgcctataa-tcccaggtactcaggaggctga-ggcaggagaatcgctggaacctgggaggca-gaggttgcggtgag-ccaagattgcaccattgcactccagcctgggcaaca-agagcaagattctgtctcaaaaaaaa s panTro4.chr3 13823643 305 - 202329955 agaagttcagattctgggccgggcacagtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaatatggagaaatgccatctctactaaaaaaa-tataaaaattag-ccaggtgtggtggtgcacacctataa-tcccaggtactcaggaggctga-ggcaggagaatcgctggaacctgggaggca-gaggttgcggtgag-ccaagattgcaccattgcactccagcctgggcaaca-----caagattctgtctcaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13805854 314 - 202140232 agaagttcagattctgggctaggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgagatcag-agttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaaaa-tacaaaaattagcccaggcgtggtggtgcacgcctgtaattcccaggtactcaggaggctaagggcagaagaatcacttgaacctgggaggcgtgaggttgcagtgagcccaagactgcgccattgcactccagtctgggcaacaaagagcaagattttgtgtcaaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14356642 309 - 123690457 agaagttcagattctgggccgggcacggtggctcaggcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggagaaaccccatctctactaaaaaaattacaaaaattag-ctgggcatggtggtgcacgcctgtaa-tcccaggtactcaggaagctaa-ggcaggagaatcacttgaacctgggaggcg-gaggttgcagtgag-ccaagattgtgccactgcactccagccagggcaaca-agagcaagattctgtctc-aaaaaaa i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4954322 0 + 91754291 C e papAnu2.chr2 101088808 204 + 187378091 I e macFas5.chr2 103296204 0 - 192460366 C e rheMac3.chr2 103652126 0 + 192599291 C e canFam3.chr34 24809642 7 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=717236.000000 s hg38.chr3_KI270781v1_alt 74552 308 + 113034 agaagttcagattccacctgcagc-----tgacacagggaacttgaagaatgttcatcagggaaatgacatgatgagatgtgaatattaacaagacctctc--tatggaagagaaaagccaggagatgaag-tgaggaagagtcaagatgatgctgcaatggtccaggagagaaccaagttggggtggtggaatggagaggaaagtccaaataaccccatagcaggta-gaactgggtgaacacagtgagcaattgaccatgaggggttgatatggtttggctgtgtccccacccaaatctcatcttctttttattt s panTro4.chr3 13823948 308 - 202329955 agaagttcagattccacctgcagc-----tgacacagggaacttgaagaatgttcatcagggaaatgacatgatgagatgtgaatattaacaagacctctc--tgtggaagagaaaagccaggagatgaag-tgaggaagagtcaagatgatgctgcaattgtccaggagagaaccaagttggggtggtggaatggagaggaaagtccaaataaccccatagcaggta-gaactgggtgaacacagtgagcaattgaccatgaggggttgatatggtttggctgtgtccccacccaaatctcatcttctttttattt i panTro4.chr3 C 0 I 5 s ponAbe2.chr3 13806168 310 - 202140232 agaagttcagattccacctgcagc-----tgacacagggaacttgaagaatattcatcagggaaatgacatgatgagatgtgaatattaacaagacttctc--tatggaagagaaaagccaggagatgaagttgaggaagagtcaagatgatgctgcaatggtccaggagagaaccaagttggggtggtggaatggagaagaaagtccaagtaaccccatagtgggtaggaactgggtgaacacagtgagcaattgaccatgaggggttgatatggtttggctgtgtccccacccaaatctcatcttctttttattt i ponAbe2.chr3 C 0 I 10 s nomLeu3.chr11 14356951 305 - 123690457 agaagttcagattccacctgcagc-----tgacacagggaacttcaagaatgttcatcagggaaatgacatgatgagatatgaatattaacaagacctctc--tatggaagagaaaagccaggagatgaag-tgaggaagagtcaagatgatgctttaatggtccaggagagaaccaagttggggtagtggaatggagaggaaagtccaaataaccccttagcgggta-gaactgggtgaacacagtgagcaattgaccatgaggggttgatatggtttggctgtgtccccacccaaatctca---tctttttattt i nomLeu3.chr11 C 0 I 2 s rheMac3.chr2 103652126 315 + 192599291 agaagttcagattccacctgcagcttggttgacacagggaacttgaagaatgttcatcagggaaatgacatgatgagatgggaatattagcaagacctctttgtatggaagagaaaagccaggaggtgaag-ggaggaagagtcaaaatgatgctgtaatggtccaggagagaactaagttggggtggtgggatggagAGGAAAGCCCAAATAACCCCAGAGTGGGTA-GAACTGACTAAACACAGTGAGCAATTGACTGTGAGAGGTtgatacggtttggctgtgtccccacccaaatctcatcttCTTTTTTTGC i rheMac3.chr2 C 0 I 52 s macFas5.chr2 103296204 311 - 192460366 agaagttcagattccacctgcagctcggctgacacagggaacttgaagaatgttcatcagggaaatgacatgatgagatgggaatattagcaagacctctttgtatggaagagaaaagccaggaggtgaag-tgaggaagagtcaaaatgatgctgtaatggtccaggagagaACCAAGTTGGGGTGGTGGGATGGAGAGGAAAGCCCAAATAACCCCAGAGTGGGTA-GAACTGACTAAACACAGTGAGCAATTGACTGTGAGAGGTtgatacggtttggctgtgtccccacccaaatctcatcttCTTTTT---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101089012 310 + 187378091 AGAAGTTCAGATTCCACCTGCAGCTCGGCTGACACAGGGAACTTGAAGaatgttcatcagggaaatgaCATGATGAGATGGGAATATTAGCAAGACCTCTTTGTATGGAAGAGAAAAGCCAGGAGGTGAAG-TGAGGAAAAGTCAAAATGATGCTGTAATGGTCCAGGAGAGAACCAAGTTGGGGTGGTGGGATGGAGAGGAAAGCCCAAATAACCCCAGAGTGGATA-GAACTGACTAAACACAGTGAGCAATTGACTGTGAGAGGTTGata-ggtttggctgtgtccccacgcaaatctcatcttcttttt---- i papAnu2.chr2 I 204 C 0 s chlSab2.chr15 4954322 315 + 91754291 agaagttcagattccacctgcagctcggctgacacagggaacttgaagaatgttcatcagggaaatgacatgatgagatgggaatattagcaagacctctctgtatggaagagaaaagccaggaggtgaaa-tgaggaagagtcaaaatgatactgtaatggtccaggagagaACCAAGTTGGGGTGGTGGGATGGAGAGGAAAGCCCAAATAACCCCAGAGTGGGTA-GAACTGACTAAACACAGTGAGCAATTGACTGTGAGAGGTtgatacggtttggctgtgtccccacccaaatctcatcttCTTTTTTTGC i chlSab2.chr15 C 0 I 52 e canFam3.chr34 24809642 7 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=45107.000000 s hg38.chr3_KI270781v1_alt 74860 44 + 113034 ttttttttga--------------gatggagtcttgctccatcacccaggctggagtg s panTro4.chr3 13824261 44 - 202329955 ttttttttga--------------gatggagtcttgctccatcacccaggctggagtg i panTro4.chr3 I 5 C 0 s ponAbe2.chr3 13806488 44 - 202140232 ttttttttga--------------gatggagtcttgctccatcacccaggctggagtg i ponAbe2.chr3 I 10 C 0 s nomLeu3.chr11 14357258 44 - 123690457 ttttttttga--------------gatggagtcttgctccatcacccaggctggagtg i nomLeu3.chr11 I 2 C 0 s macFas5.chr2 103296515 55 - 192460366 ---TTGCAGAGGGAGGGATGGAGGgatggagtctcactctgtcactcaggctggagtg i macFas5.chr2 C 0 I 1 s papAnu2.chr2 101089322 55 + 187378091 ---ttgcagagggagggatggagggatggagtctcactctgtcactcaggctggagtg i papAnu2.chr2 C 0 I 1 e chlSab2.chr15 4954637 52 + 91754291 I e rheMac3.chr2 103652441 52 + 192599291 I e canFam3.chr34 24809642 7 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1346411.000000 s hg38.chr3_KI270781v1_alt 74904 562 + 113034 agtggcacaatcttggctcactgcaacatctgcctcccaggttcaaatgattctcat-gcctcagcctcctgagtagctgggattacaggcacgcaccaccatgcctagctaatttttgtatttttagtagagatagcg----------ttggccaggccggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaag---tgctgggattacaggctgtgagccactgcgctggccccaaatctcatcttgaattgtagcttccacaattcttgaatgttgtgggagggacccggtaggaggtaattgaatcatggggacaggtctttcccatgctgttcttgtgatagtgaataagtc-tcatgaaatccgatggttttataagggggag---tttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctcttttctgtataaattacccagtctcaggtatgtctttattagcagcat s panTro4.chr3 13824305 562 - 202329955 agtggcacaatcttggctcactgcaacatctgcctcccaggttcaaatgattctcat-gcctcagcctcctgagtagctgggattacaggcacacaccaccatgcctggctaatttttgtatttttagtagagatagcg----------ttggccaggccggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaag---tgctgggattacaggctgtgagccactgcgctggccccaaatctcctcttgaattgtagcttccacaattcttgcatgttgtgggagggacccggtaggaggtaattgaatcatggggacaggtctttcccatgctgttcttgtgatagtgaataagtc-tcatgagatccgatggttttataaggcggag---tttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttccgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctcttttctgtataaattacccagtctcaggtatgtcttttttagcagcat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13806532 567 - 202140232 agtggcacaatcttggctcactgcaacatccacctcccaggttcaagtgactctcatggcctcagcctcctgagtagctgggattacaggcacgcaccaccatgcctggctaatttttgtatttttagtagagataggg----------ttggccaggctggtcttgaactcctgacctcaggtgatccgcccacctcagcctcccaaag---tgctgggattacaggctgtgagccactgcactggccccaaatctcatcttgaattgtagcttccacaattcttgcgtgttgtgggagggacccggtaggaggtaattgaatcatggggacaggtctttcccatgctgttcttgtgatagtgaataagtcttcatgaggtctgatggttttataagggggggagtttcccctgcacaagctctctctttgcctgctgccatctatgtaagatgtgacttgctcctccatgccttccaccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctcttttctgtataaattacccagtctcaggtatgtctttattagcagcat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14357302 562 - 123690457 agtggcacaatcttggctcactgcaacatccacctcccaggttcaagtgattctcat-gccttagcctcctgagtagctgggattacaggcacacaccaccatgcctggctaatttttgtatttttagtagagataggg----------ttggccaggctggtctcgaactcctgacctcaggtgatctgcctgcctcagccttccaaag---tgctgggattacaggctgtgagccactgcgccggcaccaaatctcatcttgaattgtagcttccacaattcttgcgtgttgtgggagggacccagtaggaggtaattgaatcatagggacaggtctttcccatgctgttcttgtgatagtaaataagtc-tcatgagatctgatggctttataagggggag---tttccctgtacaagctctctctttgcctgctgccatccatgtaagatgtgagttgctcctccttgctttccgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaatctcttttctgtataaattacccagtctcaggtatgtctttattggcagcat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103652493 575 + 192599291 agtggcgtaatcttggctcactgaaacatctgcctcccaggttcaagtgattctcat-gcctcagcctcctgagtagctggaattacaggcacccaccaccatgcctggataatttttgtattgttagtagacacagggtttcaccatcttggccaggctggtctcgaactcctgccctcaagtgatccacccgcctcagcctcccagtgtgctgctgggattagaggctgtgagccactgtgcTGGCcccaaatctcatcttgaattgtagcttctacaattcttgagtgttatgggagggaccaggtgggaggtaattgaatcatgggggtgggtttttcccatgctgttctcgcgctagtgaataagtc-tcatgagatctgatggttttataaaggggag---tttgcctgcacaagctctccttttgcctgctgccatccatgtaagatgtgacttgctccttcttcccttccaccatgagtgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttcctgtataaatgacctagtcccgggtatgtctttattagcagcat i rheMac3.chr2 I 52 C 0 s macFas5.chr2 103296571 575 - 192460366 agtggcgtaatcttggctcactgaaacatctgcctcccaggttcaagtgattctcat-gcctcagcctcctgagtagctggaattacaggcacacaccaccatgcctggataatttttgtatttttagtagacacagggtttcaccatcttggccaggctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaatgtgctgctgggattacaggctgtgagccactgtgcTGGCcccaaatctcatcttgaattgtagcttccacaattcttgagtgttatgggagggaccaggtgggaggtaattgaatcatgggggtgggtttttcccatgctgttctcgtgatagtgaataagtc-tcatgagatctgatggttttataaaggggag---tttccctgcacaagctctccttttgcctgctgccatccatgtaagatgtgacttgctccttcttcccttccaccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttcctgtataaatgacctagtcccgggtatgtctttattagcagcat i macFas5.chr2 I 1 C 0 s papAnu2.chr2 101089378 575 + 187378091 agtagcgtaatcttggctcactgaaacatctgcctcccaggttcaagtgattctcat-gcctcagcctcctgagtagctggaattacaggcacacaccaccatgcctggataatttttgtatttttagtagacacagggtttcaccatcttggccaggctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaatgtgctgctgggattacaggctgtgagccactgtgctggccccaaatctcatcttgaattgtagcttccacaaTTCTTgagtgttatgggagggaccaggtgggaggtaattgaatcatgggggtgggtttttcccatgctgttctcgtgatagtgaataagtc-tcatgagatctgatggttttataaaggggag---tttccctgcacaagctctccttttgcctgctgccatccatgtaagatgtgacttgctccttcttgccttccaccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttcctgtataaatgaCCTAGTcccgggtatgtctttattagcagcat i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 4954689 575 + 91754291 agtggcgtaatcttggctcactgaaacatctgtctcccaggttcaagtgattctcat-gcctcagcctcctgagtagctggaattacaggcacacaccaccatgcccggataatttttgtatttttagtagacacagggtttcaccatcttggccaggctggtctcgaactcctgacctcaagtgatccacccgcctcagcctcccaatgtgctgctgggattacaggctgtgagccactgtgcTGGCcccaaatctcatcttgaattgtagcttccacaattcttgagtgttatgggagggaccaggtgggaggtaattgaatcatgggggtgggtttttcccatgctgttctcgtgatagtgaataagtc-tcatgagatctgatggttttataaaggggag---tttccctgcacaagctcttcttttgcctgctgccatccatgtaagatgtgacttgctccttcttgccttccaccatgattgtgaggcctccccagctatgtggaactgtgagtccattaaacctctttcctgtataaatgacccagtcccaggtatgtctttattagcagcat i chlSab2.chr15 I 52 C 0 e canFam3.chr34 24809642 7 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=789211.000000 s hg38.chr3_KI270781v1_alt 75466 302 + 113034 gaaaacaaactaatacaggagtgaaggaagggaggagcccaggatgatgccctagtttctgacttgagcatctggCTGGCTGTTCACCTGGTCCCAGAA-GAGACCTACACACATGCTTTCTCCCCTC-CAATTTCCCCTTCCCCTTGACCTGT-GATCTATTCC--TCCACCCCAGGTCCCTTTCA----------ACATTAGACATCCCTCACCC-CTATTCACCTGATGCA-CACGGCAAG-GGAGGGCACAGAA---------------------------------ATAGGCTCCCAAT-AGAGGCTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTACAGTCCCT s panTro4.chr3 13824867 302 - 202329955 gaaaacaaactaatacaggagtgaaggaagggaggagcccaggatgatgccctagtttctgacttgagcatctggCTGGCTGTTCACCTGGTCCCAGAA-GAGACCTACGCACATGCTTTCTCCCCTC-CAATTTCCCCTTCCCCTTGACCTGT-GATCTATTCC--TCCACCCCAGGTCCCTTTCA----------ACATTAGACATCCCTCACCC-CTATTCACCTGATGCA-CACGGCAAG-GGAGGGCACAGAA---------------------------------ATAGGCTCCCAAT-AGAGGCTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTACAGTCCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13807099 306 - 202140232 gaaaacaaactaatacaggagtgaaggaagggaggagcccagggtgatgccctagtttctgacttgagcatctggCTGGCTGTTCACCTGGTCCCAGAAGGAGACAAACCCACATGCTTTCTCCCCTC-CAATTTCCCCTTCCCCTTGACCTGTGGATCTATTCC--TCCACCCCAGGTCCGTTTCA----------ACATTAGACATCCCTCACCC-CTATTCACCTGATGCA-CACGGCAAGAAGAGGGCACAGAA---------------------------------ATAGGCTCCCAATCAGTGGCTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTACAGTCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14357864 302 - 123690457 gaaaacaaactaatacaggagtgaaggaagggaggagcccagaatgatgccctagtttctgacttgagcatctggCTGGCTGTTCACCTGGTTCCAGTA-GAGACCAACCCACGTGCTTTCTCCCCTC-CAATTTCCCCTTCCCCTTGACCTGT-GATCTATTCC--TCCACCCCAGGTCCCTTTCA----------ACATTAGACATCCCTCGCCC-CTATTCACCTGATGCA-CACGGCAAG-GGAGGGCACAGAA---------------------------------AAAGGCTCCCAAC-AGAGGCTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTACAGTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103653068 302 + 192599291 gaaaacaaactaatacagggatgaaggaagggaggagcccaggatgatgccttcgtttctgacttgagcatttgACTGGCTGTTCACCTGGTCCTAGAA-GAGACCAACCCACATGCTTTCTCCCCTA-CAATCTCCCCTTCCCCTTGACCTGT-GATCTGTTCC--TCCATCTCAGGTCCCTTTCA----------CCATTAGACATCCCTCACCC-CTTTTTGCCTGATGCA-CACAGCAAG-AGAGGGCACAGAA---------------------------------ATAGGCTCCCAAC-AGAGGTTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTAGAGTCCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103297146 302 - 192460366 gaaaacaaactaatacagggatgaaggaagggaggagcccaggatgatgccttcgtttctgacttgagcatttgACTGGCTGTTCACCTGGTCCTAGAA-GAGACCAACCCACATGCTTTCTCCCCTA-CAATCTCCCCTTCCCCTTGACCTGT-GATCTGTTCC--TCCATCTCAGGTCCCTTTCA----------CCATTAGACATCCCTCACCC-CTTTTTGCCTGATGCA-CACAGCAAG-AGAGGGCACAGAA---------------------------------ATAGGCTCCCAAC-AGAGGTTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTAGAGTCCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101089953 302 + 187378091 gaaaacaaactaatacagggatgaaggaagggaggagccCAGGATGATGCCTTAGTTTCTGACTTGAGCATCTGACTGGCTGTTCACCTGGTCCTAGAA-GAGACCAACCCACATGCTTTCTCCCCTA-CAATCTCCCCTTCCCCTTGACCTGT-GATCTGTTCC--TCCATCTCAGGTCCCTTTCA----------CCATTAGACATCCCTCACCC-CTTTTTGCCTGATGCA-CACAGCAAG-AGAGGGCACAGAA---------------------------------ATAGGCTCCCAAC-AGAGGTTGCCAGGCATGGCCCTGGAGA---------CAGCTCACTTGTTAGAGTCCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4955264 301 + 91754291 gaaaacaaactaatacaGGg-tgaaggaagggaggagcccaggatgatgccttagtttctgaattgagcatctgACTGGCTGTTCACCTGGTCCTGGAA-GAGACCAACCCACATGCTTTCTCCCCTA-CAATCTCCCCTTCCCCTTGACCTGT-GATCAGTTCC--TCCATCTCAGGTCCCTTTCA----------CCATTAGACATCCCTCACCC-CTTTTTGCCTGATGCA-CACAGCAAG-AGAGGGCACAGAA---------------------------------ATAGGCTCCCAAC-AGAGGTTGCCAGGCATGGCCCTGGAGA---------TAGCTCACTTGTTACAGTCCCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24809649 335 - 42124431 GAAGGAGGACTTGTGGGGGGATGGAGGAAGGGAGGAGCCTGGGATGATCCCCTGCTTT-----------------CTAGCTGTTCTCCCTCTCCCAAAA---GACTGGCCCA----CTTTCTCCTCTAGCAATTTCCTCTTCCCTGTGACCTAC-GGTCTCTTCCCTTCTGGCCCAGGTCCCTTACAGCACCTTATGCCATTAGACATTCCTCATCCACCAACCACCTAATGTATTAGAGTGGG-AGACAACACAGGAAGTAGTCCCCTAGACGGTCCTATAGAGGTCCCTATAGAGTCTCTAT-AGATGCTGCCAGGCATTGCCCTGGGGAGAGGGGGGCCAGCTTACTAGCT-TAGCCCCT i canFam3.chr34 I 7 C 0 e calJac3.chr15 92439687 13539 - 98464013 T a score=987653.000000 s hg38.chr3_KI270781v1_alt 75768 421 + 113034 GCtgctatggtttgaatgttaatcccctcctaaactcatgttgaaacttaatctccaa-atgacagtgttgaga-ggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgactggattaatccatttgtggatgaatggattcatgggttatcatgggagtggggctggtggccttataagaagaggaagagacacctgagctagcacactcagcccctcaccat-gtgatgccctgtg-ccacctcaggactctgcaaagagtccccaccaacaagaaggctctcgccagatccggctccttgatctt-ggacttctcagtcttcataactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttatatgtaacagaaattagacG-AGATAACA s panTro4.chr3 13825169 421 - 202329955 GCtgctatggtttgaatgttaatcccctcctaaactcatgttgaaacttaatctccaa-atgacagtgttgaga-ggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgactggattaatccatttgtggatgaatggattcatgggttatcatgggagtggggctgctggccttataagaagaggaagagacacctgagctagcacactcagcccctcaccat-gtgatgccctgtg-ccacctcaggactctgcaaagagtccccaccaacaagaaggctctcgccagatccggctccttgatctt-ggacttctcagtcttcataactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttatacgtaacagaaattagatg-agataCCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13807405 428 - 202140232 GTtgctatggtttgaatgttaatcccctcctaaactcatgttgaaacttaatctccaa-atgacagtgttgagagggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgaatggattaatccatttgtggatgaatggattcatgggttatcatgagagtggggctggtggccttataagaagaggaagagacacctgagctagcacactcagcccctcaccatggtgatgccctctgcccacctcaggactctgcaaagagtccccaccaacaagaaggctctcgacagatccggctccttgatcttgggacttgttagtcttcgtaactgtaagaaataaattcctttttaaaataaattacccagtttcaagcattattctgttataagcaacagaaattagact-aGATACCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14358166 413 - 123690457 GCtgctatggtttgcatgttaatcccctcctaaactcatgttgaaacttaatctccaa-atgacagtgttgaga-ggtggggcttttaagaagtgactgggtcatgagactctgcccttatgaatggat-------tttgtggatgaatggattcatgggttatcatgggagtggggctggtggccttataagaagaggaggagacacccaagctagcacactcagcccctcaccat-gtgatgctctgtg-ccacctcaagactctgc-aagagtgcccaccaacaagaaggctctcgccagatccggctccttgatctt-ggacttgtcagtctttgtaactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttataagcaacagaaattagact-aGATACCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103653370 422 + 192599291 GCtgctatggtttgaatggtaatcgcctcctaaactcatgttggaacttaatctccaatgtgacagtgttgaga-ggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgaatggattaatccatttgtggatgaatatattcatgggttatcatgagagtgggactggtggccttataagaagaggaagagactcctgagctagcac-ctcagtccctcaccat-gtgatgccctgtg-ccacctcaggactctgcaaagagtccccaccaacaaggaggctatcgccagatccggctcctggatctt-ggacttgtcagccttcttaactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttacaagcaacagaaattagattaagataCCA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103297448 423 - 192460366 GCtgctatggtttgaatggtaatcgcctcctaaactcatgttggaacttaatctccaatgtgacagtgttgaga-ggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgaatggattaatccatttgtggatgaatatattcatgggttatcatgagagtgggactggtggccttataagaagaggaagagacacctgagctagcacactcagttcctcaccat-gtgatgtcctgtg-ccacctcaggactctgcaaagagtccccaccaacaagaaggctatcgccagatccggctcctggatctt-ggacttgtcagccttcttaactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttataagcaacagaaattagattaagataCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101090255 423 + 187378091 GCTGCTATGGTTAGAATGGTAATCGCCTCCTAAACTCATGTTGGaacttaatctccaatgtgacagtgttgaga-ggtggggcctttaagaagtgACTGGGTCGTGaggctctgcccttatgaatggattaatccatttgTGGATGAATATATTCATGGATTATCATGAGAGTGGGACTGGTGGCCTTATacgaagaggaagagacacctgagctagcacactcagtctctcaccat-gtgatgccctgtg-ccacctcaggactctgcaAAGAGTCCCCACCAACAAGAAGGCTATCGCCAGATCCGGCTCCTGGATCTT-GGACTTGTCAGCCTTcttaactgtaagaaataaattcctttttaaaataaattacccagtttcaag---cattctgttataagcaacagaaattagATTAAGATACCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4955565 419 + 91754291 GCtgctatggtttaaatggtaatcgcctcctaaactcatgttggaacttaatctccaatgtgacagtgttgaga-ggtggggcctttaagaagtgactgggtcatgaggctctgcccttatgaatggattaatccatttgtggatgaatatattcatgggttatcatgagagtgggactggtggcct----agaagaggaagagacacctgagctagcacacacagtccctcaccat-gtgatgccctgtg-ccacctcaggactctgcaaagagtccccaccaacaagaaggctgtcgccagatccggctcctggatctt-ggacttgtcagccttcttaactgtaagaaataaattcctttttaaaataaattacccagtttcaag---tattctgttataagcaacagaaattagattaagataCCA i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24809984 0 - 42124431 C e calJac3.chr15 92439687 13539 - 98464013 T a score=4625683.000000 s hg38.chr3_KI270781v1_alt 76189 1775 + 113034 GTCCAGGC--------CATCTCTCACCCCTGAGCT-TGAGC-TCGCAA-CCCCATAGAGATGGG-T-AGTCCAACAG-TTAAGGCCCTATCCAAGTTGCCCAGACCTGCCAGTCCAG-CGCCATCCACTCATCGTGCACCTTGCTTCAGCCTCACTGAA-CCATATTCTCCTCTTGTGATTTCCCACACCAGGCCCTCCT-----CTTGC-AATGTCTGGAccttcac-agttcaattcaaacgccccctcctctatgaggtctgctgtgactcccc-agctgggaatatcttcctccttgatctccacttgctttgcattttgttcttattaatcct-gctctgtattgtgaggcttttacgtgctcatgggttgtc-tttactagatgtcaagaactcAAAGCCAGTGTCTG-TTCCAGGCAGGTCCCTGCACAGAGTGGGGGTGAGGGAGTGCACAGAGAAGGAGCAAGAAGGTAGAGCCAAGACCCAGTGAGTGGGCCGGGGACTGGGGCATGGTGTAGGAAGACAGGTCT-TGCCTCTCAGGACAGGAGGAGCTCAGAGAAAACGTTGCCTCTACTACTGCTGCT---CCAAATGCAGACCTTATGGTTTCTAGGACCTTCATATGGACCAAACTGGGCTGTTCCTTGGGGTGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAACTGCTGCAACC---------ATGTGCTAAGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGACGACCCCTGACGGTGCCCAACCTGGACTGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTTGGTTCACTCCCTCTGGGTGTGAGCTAGG---CGCCA-GATGTCCCCACACTAGAG-----GACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAAAATGGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG-AAAAAAAAAAAACAGATTGTGACTGAAACACAGTCACCAGCTGATGTAGCATATTTGGAGCTATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGAA-GGGTAGGCATGGGAAACCTTTCCCCAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTTGGGCAGGtt-------tgtgcttcacttgctcatctataaaagagggatcaaagggagtgttgtgaagaattaaatgagttagtagatatgtaaagtgcttagcacagtgccttggcacatagg-agtgctATCATGATTTGTATTAGTTTTTCTAGGATAATTAGAATTGCAGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCGGATGGAAAGGGTAAGATAGTTACATTAACTCCAGCTTGGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGC---AGGAAAAGTCATTGAGGACCCTGGATGTTTGCGTTCC-TTGCAAT-CTGCTCAAAATGATAG-GTTTTTATATTTAGCGCA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATGAGTTGTGAGAAATAAATTAAATAAGAAAGAAAAAGGATTTTAAAAA---TCATGTCTGGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGCATAGTTTCTGACTTCTCTAGAGCGAAAACTCAGATATATCTAGAG s panTro4.chr3 13825590 1774 - 202329955 GTCCAGGC--------CATCTCTCACCCCTGAGCT-TGAGC-TCGCAA-CCCCATAGAGATGGG-T-AGTCCAACAG-TTAAGGCCCTATCCAAGTTGCCCAGACCTGCCAGTCCAG-CGCCATCCACTCATCGTGCACCTTGCTTCAGCCTCACTGAA-CCATATTCTCCTCTTGTGATTTCCCACACCAGGCCCTCCT-----CTTGC-AATGTCTGGAccttcac-agttcaattcaaacgccccctcctctatgaggtctgctgtgactcccc-agctgggAATATTTTCCTCCTTGATCTCCACTTGCTTTGCATTTTGTTCTTATTAATCCT-GCTCTGTATTGTGAGGCTTTTACGTGCTCATGGGTTGTC-TTTACTAGATGTCAAGAACTCAAAGCCAGTGTCTG-TTCCAGGCAGGTCCCTGCACAGAGTGGGGGTGAGGGAGTGCACAGAGAAGGAGCAAGAAGGTAGAGCCAAGACCCAGTGAGTGGGCCAGGGGCTGGGGCATGGTGTAGGAAGACAGGTCT-TGCCTCTCAGGACAGGAGGAGCTCAGAGAAAACGTTGCCTCTACTACTGCTGCT---CCAAATGCAGACCTTATGATTTCTAGGACCTTCATATGGACCAAACTGGGCTGTTCCTTGGGGTGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAACTGCTGCAACC---------ATGTGCTAACAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGACGACCCCTGACGGTGCCCAACCTGGAATGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTTGGTTCACTCCCTCTGGGTGTGAGCCAGG---CGCCA-GATGTCCCCACACTAGAG-----GACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAAAATGGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG--AAAAAAAAAAACAGATTGTGACTGAAACACAGTCACCAGCTGATGTAGCATATTTGGAGCTATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGAG-GGGTAGGCATGGGAAATCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTTGGGCAGGtt-------tgtgcttcacttcctcatctataaaagagggatcaaagggagtgttgtgaagaattaaatgagttagtagatatgtaaagtgcttagcacagtgccttggcacatagg-agtgctATCATGATTTGTATTAGTTTTTCTAGGATAATTAGAATTGCAGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCAGATGGAAAGGGTAAGATAGTTACATTAACTCCAGCTTGGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGC---AGGAAAGGTCATTGAGGACTCTGGATGTTTGCGTTCC-TTGCAAT-CTGCTCAAAATGATAG-GTTTTTATATTTAGCGCA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATGAGTTGTGAGAAATAAATTAAATGAGAAAGAAAAAGGATTTTAAAAA---TGATGTCTGGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGCATAGTTTCTGACTTCTCTAGAGTGAAAACTCAGATATATCTAGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13807833 1802 - 202140232 GCCTGGGC--------CATCTCTCACCCCTGAGCT-TGAGCTTCGCAA-CCCCATAGAGATGGGTT-AGTCCAACAGTTTAAGGCCCTCTCCAGGTTGCCCAGACCTGCCAGTCCAACCACCATCCACTCATTGTGCATCTCGCTTCAGCCTCACTGAA-CCACATTCTCCTCTTGTGATTTCCCAAGCCAGGCCCTCCT-----CTTGCAAATGTCTGGAccttcacaagttcaattcaaatgacccctcctctatgaggtctgctctggctccccaagctgggaatatcttcctccttgatctccactggctttgcattttgttcttattaatcct-gctctgtattgtgaggcttttacgtgctcatgggctgtcttttactagatgtcaagaactcaaaggcaatgtctgtttcCAGGCAGGTCCCCGCTCAGAGTGGGGGTGAGGAAGTGCACAGAGAAGGAGCAAGAAGGTAGAGCCAAGACCCAGTGAGTGGGCCGGGGGCTGGGGTATGGTGTAGGAAGACAGGTCC-TGCCTCTCAGGACAGGAAGAGCTCAGAGAAAACGTTGCCTCTACTACTGCTGCT---CCCAATGCAGACCTTATGGTTTCTAGGGCCTTCATATGGACCAAACTGGGCTGTTTCTTGGGGTGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACGTGCTAAGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGATGACCCTTGACGGTGCCCAACCTGGACTGAGCCCTTTTCTGGGACAAGGATTCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTTGGTTCACTCCCTCTGGGTGTGAGCCAGGCCACACCA-GATGTCCCCACACTAGAG-----GACACCAGGGTGGTTGGCCATCATGGCCAGGTTCACTTTTCTAAAACGGGATCAGGAATTTTTCGGAAGAAAAGGGTTGGCAGAAAAAAAAAAAAACAGATTGTGACTGAAACACAGTCACCAGCTGATGTAGCATATTTGGAGCTATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGGA-AGGCAGGCATGGGAAACCTGTCCCTAGAATTAGCAGAGAATAGCCCAGGTAAGATCCCCGCTA-ACCAATGATTTGGGCAGGtt-------tgtgcttcacttcctcatccataaaagagggatcaaagggagtgttgtgaagaattaaatgagttagtagatatgtaaagtgcttagcacagtgccttggcacatagg-agtgctATCATGATTTGTATTACTTTTTCTAGGATAATTACAATTGCAGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTGGGATGGAAAGGGTAAGATAGTTACATTAACTTCAGCTTGGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGCTCAAGGAAAGGTCATTGAGGATCCTAGATGTTTGCATTCCTTTGCAATCCTGCTCAAAATGATAGTGTTTTTATATTTAGCGCA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATACTTGATTAAGTCATGAGCTGTGACAAATAAATTNAGTGAGAAAGAAAAAGAATTTTAAAAA---TGATGTCTGGTATCAACCCAACTACATAACCTTAAATCCCCCTATATCTATATCTGT-AGATACAGCATAGTTTCTGACTTCTCTAGAGCTAAAACTCAGATATATCTAGAG i ponAbe2.chr3 C 0 I 9858 s nomLeu3.chr11 14358579 1772 - 123690457 GCCCAGGC--------CATCTCTCACTCCTGAGCT-TGAGC-TCGCAACCCCCATAGAGATGGG-T-AGTCCAACAG-TTAAGGCCCTCTCTAGGTTGCCCAGACCTGCCAGTCCAG-TGCCATCCACTCATTGTGCACCTTGCTTCAGCCTCACTGAA-CCACATTCTCCTCTTGTGATTTCCCACGCCAGGCCCTCCT-----CTTGC-AAGGTCTGGAccttccc-agttcagttcaaatgccccctcctctatgaggtctgctctgactcccc-agctgggaatatcttcctcCTTGATCTTCACTGGCTTTGCATTTTGTTCTTATTAATCCT-GCTCTGTATTGTGAGGCTTTTACCTGCTCATGGGTTGTC-TTTACTAGATGTCAAGAACTCAAAGGCAATGTCTG-TTCCAGGCAGGTCCCTGCTCAGAGTGGGGGTGAGGGAGTGCACAGAGAAGGAGCAAGAAGGTAGAGCCAAGACCCAGTGAGTGGGCCGGGGGCTGGGGCATGGTGTAAGAAGACAAGTCC-TGAACCTCAGGACGGGAGGAGCTCAGAGAAAACGTTGCCTCTACTACTCCTGCC---CCAAATGCAGACCTTATGGTTTCTAGGACCTCCACATGGACCACACTGGGCTGCTCCTTGGGGTGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGACCTCCAGGCCAGCCAGTTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACGTGCTAAGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGATGACCCCTGATGGTGCCCAACCTGGACTGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACTCCTAGCA----GCCCACCAAGGTTTGGTTCACTCCCTCTGGGTGTGAGCCAGG---CCCCA-GATGTCCCCACACTAGAG-----GACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAAAATGGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG---AAAAAAAAAACAGATTGTGACTGAAACACAGTCACCAGCTGATGTAGCATATTTGGAAGGATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGGA-GGGTAGGCATGGGAAACCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCACTA-ACCAATGATGTAGGCAGGtt-------tgtgcttcgcctcctcatccataaaagagggatcaaagggagtgttgtgaagaattaaatgagttagtagatatgtaaagtgcttagcacagtgccttggcacataag-agtgctATCATGATTTGTATTAGTTTTTCTAGGATAATTAGAATTGCAGCAACATGTGTGTA----------------TGCTGACAAATCTAATTAAAGACCCAGAAAGGTTTTAAGCACTTTCACTGTCGGATGGAAAGGGTAAGATAGTTACATTAACTCCAGCTTGGTGCAAACCATGAGCAATTGAGCAGTAATTGAGAGGGTCAGC---AGGAAAGGTCATTGAGGACCCTGGATGTTTGCGTTCC-TTGCAAT-CTGCTCAGAATGATAG-GTTTTTATATTTAGTGCA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAATTATATTTGATTAGGTCATGAGTTGTG--AAATAAATTAAATGAGAAAGAAAAAGGATTTTAAAAA---TGATGTCTGGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGCATAGTTTCTGACTTCTCCAGAGCTAAAACTCAGATATATCTAGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103653792 1771 + 192599291 GCCCAGGCCCTGAGCTCAGCTCTCACCCCTGAGCT-T-AGC-TCACAA-CCCCATGGAGATGGG-T-AGTCCAACAG-TTAGGGCCCTCTCCAGGTTGCCTAGACCTGCCAGTCCAG-CACTGTCCACTCATCGTACACCTTGCTTCAGCCTCACTGAA-CCACATGCTCCTCTTGTGATTTCCCACGCCAGGACCTCCT-----CTTGC-AATGTCTGGAccttcac-agttccattcaaacgcccccttctctatgaggtctgctctgactcccc-agctgggaatatcttcctccttggtctccactggctttgcatttcgttcttattaaccct-gctctgtattgtgaggcttttatgtgctcatgggttgtc-tttactagatgtcaagaactcaaaggcaatgtctg-tTCCAGGCAGGTCCCCGCTCAGAGTGGGGGTGAGGGAGTGCACAGAGAAGGAGCAAGAAGGTAAAGCCAAGACCCAGTGAGTGGGCCGGGGGCTGGGGCATGGTGTAGGAAGACAGGTCC-TACCTCTCAGGACCGGAGGAGCTCAGAGAAAACATTGCCTCTACTACTGCTGCC---CCAAAGGCAGACCTCATGGTGTCTAGGACTTTCATATGAACCTAACTGGGCTGCTCCTTGGGATGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACGTGTTACGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGGTGACCCCTGACTGTGCCCAACCTGGACTGAGCCCTTTTCTGAGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTCAGTTCACTACCTCTCGGTGTGAGCCAGG---CCCCAGGATGTCGCCACTCCAGAGGACAAGACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTATAATATCGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG--AAAAAACAAAACAGATTGTGACTGAAACACAGTCACCAGGTGATGTAGCATATTTGGAGTCATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGGA-GGGTAGGCATGGGAAGCCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTGAGGCAGGtt-------tgtgcttcacttccttatccataaaagagggatcaaagggagtgttgtgaagaattaaatgaattagtagatatgtaaagtgcttagcacagtgccttggtacataggaagtgctATCGTGATTTGCATTAGTTTTTCTAGGATAATTAGAAT---AGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCAGATGGAAAGGGTAAGATAGTTACATTAACTCCGGCTTGGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGC-----------------AGGACCCTGGATGTTTGCATTCC-TGACAGT-CTGCTCAAAATGATAC-GTTTTTATATTTAGCACA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATGAGTTGTGAGAAATAAATTAAATGAGAAAGAAAAAGGAATTTTAAAA---TGATGTCTGGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGCATAATTTCTGACTTCTCTAGAGCTAAAACTCAGACATATCTAGAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103297871 1771 - 192460366 GCCCAGGCCCTGAGCTCAGCTCTCACCCCTGAGCT-T-AGC-TCACAA-CCCCATGGAGATGGG-T-AGTCCAACAG-TTAGGGCCCTCTCCAGGTTGCCTAGACCTGCCAGTCCAG-CACTGTCCACTCATCGTACACCTTGCTTCAGCCTCACTGAA-CCACATGCTCCTCTTGTGATTTCCCACGCCAGGCCCTCCT-----CTTGC-AATGTCTGGAccttcac-agttccattcaaacgcccccttctctatgaggtctgctctgactcccc-agctgggaatatcttcctccttggtctccactggctttgcatttcgttcttattaaccct-gctctgtattgtgaggcttttatgtgctcatgggttgtc-tttactagatgtcaagaactcaaaggcaatgtctg-tTCCAGGCAGGTCCCCGCTCAGAGTGGGGGTGAGGGAGTGCACAGAGAAGGAGCAAGAAGGTAAAGCCAAGACCCAGTGAGTGGGCCGGGGGCTGGGGCATGGTGTAGGAAGACAGGTCC-TACCTCTCAGGACCGGAGGAGCTCAGAGAAAACATTGCCTCTACTACTGCTGCC---CCAAAGGCAGACCTCATGGTGTCTAGGACTTTCATGTGAACCTAACTGGGCTGCTCCTTGGGATGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACGTGTTACGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGGTGACCCCTGACTGTGCCCAACCTGGACTGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTCAGTTCACTACCTCTCGGTGTGAGCCAGG---CCCCAGGATGTCCCCACTCCAGAGGACAAGACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAATATCGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG--AAAAAACAAAACAGATTGTGACTGAAACACAGTCACCAGGTGATGTAGCATATTTGGAGTCATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGGA-GGGTAGGCATGGGAAGCCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTGAGGCAGGtt-------tgtgcttcacttccttatccataaaagagggatcaaagggagtgttgtgaagaattaaatgaattagtagatatgtaaagtgcttagcacagtgccttggtacataggaagtgctATCGTGATTTGCATTAGTTTTTCTAGGATAATTAGAAT---AGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCAGATGGAAAGGGTAAGATAGTTACATTAACTCCGGCTTGGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGC-----------------AGGACCCTGGATGTTTGCATTCC-TGACAGT-CTGCTCAAAATGATAC-GTTTTTATATTTAGCACA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATGAGTTGTGAGAAATAAATTAAATGAGAAAGAAAAAGGAATTTTAAAA---TGATGTCTGGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGCATAATTTCTGACTTCTCTAGAGCTAAAACTCAGACATATCTAGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101090678 1774 + 187378091 GCCCAGGCCCTGAGCTCAGCTCTCACCCCTGAGCT-T-AGC-TCACAA-CCCCATGGAGATGGG-T-AGTCCAACAG-TTAGGGCCCTCTCCAGGTTGCCCAGACCTGCCAGTCCAG-CACTGTCCACTCATCGTACACCTTGCTTCAGCCTCACTGAA-CGACATGCTCCTCTTGTGATTTCCCACGCCAGGCCCTCCT-----CTTGC-AATGTCTGGACCTTCAC-AGTTCCATTCAAACGCCCCCTCCTCTATGAGGTCTGCTCTGACTCCCC-AGCTGGGAATATCTTCCTCCTTGGTCTCCACTGGCTTTGCATTTCGTTCTTATTAATCCT-GCTCTGTATTGTGAGGCTTTTATGTGCTCATGGGTTGTC-TTTACTAGATGTCAAGAACTCAAAGGCAATGTCTG-TTCCAGGCA-GTCCCCGCTCAGAGTGGGGGTGAGGGAGTGCACAGAGAA-GAGCAAGAATGTAAAGCCAAGACCCAGTGagt-ggctgggggctggggcatGGTGTAGG-AGACAGGTCT---ACTCTCA-GACCGGA-GAGCTCAGAG-AAACATTG-CTCTACTACTGCTGCC---CCAAAGGCAGACCTCATGGTGTCTAGGACTTTCATATGAACCTAACTGGGCTGCTCCTTGGGATGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACGTGTTACGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCCTGGTGACCCCTGACTGTGCCCAACCTGGACTGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GCCCACCAAGGTTCAGTTCACTACCTCTCGGTGTGAGCCAGG---CCCCAGGATGTCCCCACTCCAGAGGACAAGACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAATATCGGATCAGgaatttttcagaagaaaa-agttggcag--aaaaaacaaaacagattgtGACTGAAACACAGTCACCAGGTGATGTAGCATATTTGGAGTCATG--------TTCTTCTTGCAGATGGGGAAGGATTCAGAAACTCATGGA-GGGTAGGCATGGGAAGCCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTGAGGCAGGTT-------TGTGCTTCACTTCCTTATCCATAAAAGAGGGATCAAAGGGAGTGTTgtgaagaattaaatgaattagtagatatgtaaagtgcttagcatagtgccttGGTACATAGGAAGTGCTATCGTGATTTGTATTAGTTTTTCTAGGATAATTAGAAT---AGCAACATGTGTGTA----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCAGATGGAAAGGGTAAGATAGTTACATTAACTCCGGCTTGGTGCAAACCATGAACAATTCAGCAGTAATtgagagggtcagc---aggaaa-gTCATTGAGGACCCTGGATGTTTGCATTCC-TGACAGT-CTGCTCAAAATGATAC-GTTTTTATATTTAGCACA-AAAATTATATGCtttgtaattttaatgaaaagtCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATgagttgtgagaaataaattaaatgagaaagaaaaaggaattttaaaa---tgatgtctgGTATCAACGCAACTACATAACCTTAAAT-CccctatatctatatctgtaagATACAGCATAATTTCTGACTTCTCTAGAGCTAAAACTCAGACATATCTAGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4955984 1773 + 91754291 GCCCAGGC--------CATCTCTCACCCCTGAGCT-T-AGC-TCACAA-CCCCATGGAGATGGG-T-AGTCCAACAG-TTAGGGCACTCTCCAGGTTGCCCAGACCTGCCAGTCCAG-CAGCGTCCACTCATCGTGCACCTTGCTTCAGCCTCACTGAA-CCACATGCTCCTCTTGTGATTTCCCACGCCAGG-CCTCCT-----CTTGC-AATGTCTGGAccttcac-agttccattcaaacgccccctcctctatgaggtctactctgactctcc-agctgggaatatcttcctcCTTGGTTTCCACTGGCTTTGCATTTCGTTCTTATTAATCCT-GCTCTGTATTGTGAGGCTTTTATGTGCTCATGGGTTGTC-TTTACTAGATGTCAAGAACTCAAAGGCAATGTCTG-TTCCAGGCAGGTCCCCGCTCAGAGTGGGGGTGAGGAAGTGCACAGAGAAGGAGCAAGAAGGTAAAGCCAAGACCCAGTGAGCGGGCCGGGGGCTGGGGCATGGTATAGGAAGACAGGTCC-TACCTCTCAGGACCGGAGGAGCTCAGAGAAAACATTGCCTCTACTACTGCTGCC---CCAAATGTAGACCTCATGGTTTCTAGGACCTTCATATGAACCTAA--AGGCAGCTCCTTGGGATGAGGCTCTCCAGAGTCCCAGAAGACTCTGCTGGCCTCCAGGCCAGCCAATTCTC-CCTCTCATTATTAATTGCTGCAACC---------ACATGTTACGAGG-----------------GGATCTGATGAAATCCTCCCAGCTG-TTTCTTGGTGACCCCTGACTGTGCTCAACCTGGACTGAGCCCTTTTCTGGGACAAGGA-TCCCCAAGGATGTGCCTGGGTGTCACCCCTAGCA----GTCCACCAAGGTTCAGTTCACTACCTCTCGGTGTGAGCCAGG---CCCCAGGATGCCCCCACTCCAGAGGACAAGACACCA-GGTGGTTGG-CATCATGGC--AGGTCAC--TTCTAAAATCGGATCAGGAATTTTTCAGAAGAAAA-GGTTGGCAG--AAAAAA-AAAACAGATTGTGACTGAAACACAGTCACCAGGTGATGTAGCATATTTGGAGTCATG--------TTCTTCTTGCAGATGGGGAAGGATACAGAAACTCATGGAGGGGTAGGCATGGGAAGCCTTTCCCTAGAATTAGCAGAGAATAGCCCAGGTGAGGTCCCCGCTA-ACCAATGATTGAGGCAGGtt-------tgtgcttcacttccttatccataaaagaggggtcaaagggagtgttgtgaagaattaaatgagttagtagatatgtaaagtgcttagcatagtgccttggtacataggaagtgctATCATGATTTGTTTTAGTTTTTCTAGGATAATTAGAAT---AGCAACATGTGTGTG----------------TGTTGACAAATCTAATTAAAGGCCCAGAAAGGTTTTAAGCACTTTCACTGTCAGATGGAAAGGGTAAGATAGTTACATTAACTCCGGCTTAGTGCAAACCATGAACAATTCAGCAGTAATTGAGAGGGTCAGC---AGGAAA-GTCATTGAGGACCCTGGATGTTTGCATTCC-TGGCAGT-CTGTTCAAAATGATAC-GTTTTTATATTTAGCACA-AAAATTATATGCTTTGTAATTTTAATGAAAAGTCATTTGTAATTTAAATGGAAACTATATTTGATTAGGTCATGAGTTGTGAGAAATAAATTAAATGAGAAAGAAAAAGGAATTTTAAAA---TGATGTCTAGTATCAACCCAACTACATAACCTTAAAT-CCCCTATATCTATATCTGTAAGATACAGTATAATTTCTGACTTCTCTAGAGCTAAAACTCAGACATATCTAGAA i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24809984 1661 - 42124431 GTCTAGAC--------CATCACTTAGCCCTGAGCTGTGGGT-TCTTGG-TCCTATAGAACTGTG-TAAGTCCAACAG-GTAAGGCCCTCCCCAGGCTGCCCAGACCCACCT-------CCCCCTCTGCTCACTGTTT-CCTTTCTTCAGCCTCACTGAGCCCACACTCTCCTCTTGTGATTTCCCATCCCAGGGCCCTCTCTCTGCTTGT-AATGTCCAAATCTTCAA-GGCCCAATTCAAATGACACCTCCTCACTAAT-----------TTCCCC-AACTGAG--TCTCTCTGTCCCCGATCTGTACTGGCTTCCCATGTGGTCCTCTCCATTCCCAGCTCTGTGCTGGGGACCTATTATGCATT------------CTTGCCAGATGTCAAGAACCCAAAG-------------CCAGGCAGGAACTTGCTCAGAGTGAGGGAAGGGGAGTGCACAGG-----------------------------------------------TGGGGGCCAGTGCAGAAAAACAGGTCCAGGCCTCTCAGGGCAAGAGAAGCTGAGTGTCAGTGGCTCCGCCACCACTACTGCCCATCCAAAGACATGCC-----------------------CAGACCA-------------------GTGCCACCCCCGTGGGTCTTAGTA-----------TCAACAGG--GATCAGTGCTCTCCCCTCATTATTAATCACTGCAACCAAGAGACAAACACACCACTAGGTCACACCCTTCCCATGCAGGCCTTACCAAATCCTCCCAGCTGCCTTCCCACTGGCCCCCGAC----CTCA------------CCGTCTTCTGGACTCAGGG-TCCCAAAGGATGTGCCTCGGTGTCATTCCAAGGAACTCACTCACCAAGGTTTGGCTCACAACCTCAGGGAGTGA-CAAGG---CCCCAGGACATCCTTGCACCTGAG-----GATACCA-AGTGACCA--TGTTATGTG--AAGTCAG--TACTAAAGTGGGCTCAGGAATTTATCAGAAGGAAA-AGT----AG------AGAAAAACAGATTGTGACTGAAAAACACACACC--------TAGCATATTTGCAGCTAGGTTCTTTCTTTCTTCTTACAGAGGGGAAA--ATGCAGAAATAAACAGA----TCAGTATGGGAAACTCTCCTTTAGGACCA-CAGATAGGAGCCCACATGAAGTCCATACTATAgcaac--cttgggcaggttattactctgggctttgctccctcagtcataaaacaggcatcaaatggggttttg-ggaggactaagtgagttgatgtatatgtaaagtgtttagaacagtgccttggcacgtaataaTTACCATTATTATTTGTGTGAGCTTTCATAGGATGATTAGAATTGCGGTAAtgtgtgtgtgtgtgtgtgtgtgtATTTGTTGAC--ATTTAATTAAAGGCCCAGAAAGGTATTGAGAGCATTCGCTGTCAGATGGAAGG-----GATGATTTAATCCACTCTAGCTTGGTGCAAACCATGAACAATTAAACAGTAATTGAGAAGGTTAGC---AAGAAAGATAATTGAGCACTCTGGATGTTTGCGTTCC-TTACAGTTCTGTGTGTAATGATAG-GTTTTTATATTTAGAGCAGAAAATTATATACTTTCTAA-TTTAATGAAAAGTAATTTGTAATTTAAATGAAAATCATATTTGGTGAGGTCATGGGTTGTGATAAATAAATGAGTTCAGAAAGAAAAAAGGATGAAAAAAATTGAACGTATAGCAGGAACCCAACTATATAACGTTAAA--CTCCTGCATGTAGATCTGTAAAGTACAGCACAGTTTCTGGCTGGTCTAGAGCTAAGACTCATAGATATCAAGAG i canFam3.chr34 C 0 I 4 e calJac3.chr15 92439687 13539 - 98464013 T a score=1676718.000000 s hg38.chr3_KI270781v1_alt 77964 914 + 113034 CCATCTGACATCTCTCCCACAGAAGGATCTATTTAACATGAAGGCTGCTGAGACTTGTTGTGATGGTTAA------------ttttttttttt-----tttttttttgagat--------------ggagtctcgctctgtctcccaggccagagtgcagt------ggcaca------------atcttgg---ctcactgca--------------------------acctctgcctcccc--------------------------------------------------agttcaagctattctc--ctgcctcagcctcccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------gtgccacc-----atgcctggctaattttt--------------tgtgttt-ttagta----------gagagg-gggtttcaccatgttagcc--aggatggtctcgatctcctgacctcgtgatctgccctgccttggcctcccaaagtgctgggattacaggcg-tgaaccaccgcgccAtgatggtaaat--tttatacagcaatttgactgggtcacagagtgcccaggtatttggttaaacattatctctgggtgtgtctatgagggggcttaaggaggagattagtgtttgaatcaatggactgagtaca-cagatggcccttcccaatgtgagtggacagtatccactctgccaaggacctgaataaaacaaaaaggtggaggaagggagaattcactctcaacctgactgtttgagctgggacaatggtattcccctgccctcagactgggtctca---catcagtgctcctggttcgcaggctttcagactcagtttggaacgtacaccatcagccctcttg-ttctcaggctttcagacttgtgctggagcccacaccgctggctctcctgcttctcaggcttc---cagactgagactggaactacaccaccagttttt----------------------------------------ccacatctctagcttgcaatgatagatggtggatcttctcagc----------------------------------------ctccatatgtatatatctattatctgtctcccattggttctgttcctctggagaactctgactca s panTro4.chr3 13827364 919 - 202329955 CCATCTGACATCTCTCCCACAGAAGGATCTATTTAACATGAAGGCTGCTGAGACTTGTTGTGATGGTTAAtttt-------tttttttttttt-----tttttttttgagat--------------ggagtctcgctctgtctcccaggccatagtgcagt------ggcacg------------atcttgg---ctcagtgca--------------------------acctctgcctcccc--------------------------------------------------agttcaagctattctc--ctgcctcagccacccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------gtgccacc-----atgcctggctaattttt--------------tgtgttt-ttagta----------gagagg-gggtttcaccatgttagcc--aggatggtctcgatctcctgacctcgtgatctgccctgccttggcctcccaaagtgctgggattacaggcg-tgaaccaccgcgccAtgatggtaaat--tttatacagcaatttgactgggtcacagagtgcccaggtatttggttaaacattatctctgggtgtgtctatgagggggcttaaggaggagattagtgtttgaatcaatggactgagtaca-cagatggcccttcccaatgtgagtggacagtatccactctgccaaggacctgaataaaacaaaaaggtggaggaagggagaattcactctcaacctgactgtttgagctgggacaatggtcttcccctgccctcagactgggtctca---catcagtgctcctggttcgcaggctttcagactcagtttggaacgtacaccatcagccctcttg-ttctcaggctttcagacttgtgctggagcccacaccgctggctctcctgcttctcaggcttc---cagactgagactggaactataccaccagttttt----------------------------------------ccacatctctagcttgcaatgacatgtggtggatcttctcagc----------------------------------------ctccatatgtatatctctattatctgtctcccactggttctgttcccctggagaactctgactca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14360351 905 - 123690457 CCATCTGACATCTCTCCCACAGAAGGATCTATTTAACATGAAGGCTGCTGAGAC---TTGTGCTGGTTAA-----------------tttttt-----tttttttttgagat--------------ggagtctcgctctgtcgcccaggccagagtgcagt------ggcaca------------atcttag---ctcactgca--------------------------acctctgcctccct--------------------------------------------------ggttcaagctattctc--ctgcctcagcctcccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------acgccacc-----atgcctggttaattttt--------------tgtgttt-ttcgta----------gagacg-gggtttcaccatattagcc--aggatggtctcaatctcctgacctcatgatctg-cctgccttggcatcccaaagggctgggattacaggct-tgagccaAGGTGCtgtgatggttaat--ttgatatggcaatgagactggatcacagagtgcccagatatttggttaaacattatctctgggtgtgtctatgagggggcttaaggaggagattagtgtttgaatcaatggactgagtaca-cagatggcccttcccaatgtgggtggacagtatccactctgccaaggacctgaataaaacgaaaaggtggaggaagggagaattcactctcaacctgactgtttgagctgggacaatggtcttctcctgccctcagactgggtctca---catcagtgctcctggttcgtaggctttcagactcagattggaacttacaccatcaaccctcttg-ttctcaggctttcagacttgtgctggagcccacactgccggctctcctgcttctcaggcttc---cagactcagactggaactacaccaccagttttt----------------------------------------ccacatttctagcttgcaatgacagatggtggatcttctcagc----------------------------------------ctcaatatgtacatatctattacctatctcctattggttctgttcctctggagaactctgactca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103655563 908 + 192599291 CCATCTGACATCTCTCCCACAAAAGGACCTATTTAACATGAAGGCTGCTGAGACTTATTTTGATGGTTAA--------------ttttttttt-----tttttttttgaaat--------------gcagtctcactctgttgcccaggctagagtgcagt------ggcacg------------atcttgg---ctcactgca--------------------------acctccacctccct--------------------------------------------------ggttcaagcaattctc--ctgcctcagccacccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------acgccacc-----atgcctggctaattttt--------------tgtgttt-ttagta----------gagacg-gggtttcaccatgttagcc--aggtaggtctcgctcttctgacctcgtaatctg-cctgccttggcctcccaaagtgctaggattacaggca-tgagccactgcgccAtgatggttaat--tttatacggcaatttgactgggtcacagggtgcccagatatctggttaaac---atctctgggtgtgtctatgagggggcttaaggaggagattagtgtttgaatcaatggactgagtaca-cagacggcccttcccaatgtgggtgggcagtgtccactctgccaaggacctgaataaaacaaaaaggtggaggaagggagaattcagtctcaacctgactctttgagatgggacaatggtcttctcctgccctcagactggaactca---gatcagcgctcctggttcgcaggctttcagactcacactgggactcacaccatcagccctcttg-ttctcaggctttcaggcttgtgctggagctcacaccactggctctcctgcttctcaggcttc---cagactcagactggaactacaccccccgttttt----------------------------------------ccacatctgtagcttgcaatgacagatggtgaatcttctcagc----------------------------------------caccatatgtacatatctattatctgtctcctattggttctgttcctctggagaactctgactTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103299642 907 - 192460366 CCATCTGACATCTCTCCCACAAAAGGACCTATTTAACATGAAGGCTGCTGAGACTTATTGTGATGGTTAA---------------tttttttt-----tttttttttgaaat--------------gcagtctcactctgttgcccaggctagagtgcagt------ggcacg------------atcttgg---ctcactgca--------------------------acctccacctccct--------------------------------------------------ggttcaagcaattctc--ctgcctcagccacccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------acgccacc-----atgcctggctaattttt--------------tgtgttt-ttagta----------gagacg-gggtttcaccatgttagcc--aggaaggtctcgatcttctgacctcgtaatctg-cctgccttggcctcccaaagtgctgggattacaggcg-tgagccactgcgccAtgatggttaat--tttatacggcaatttgactgggtcacagggtgcccagatatctggttaaac---atctctgggtgtgtctatgagggggcttaaggaggagattagtgtttgaatcaatggactgagtaca-cagacggcccttcccaatgtgggtgggcagtgtccactctgccaaggacctgaataaaacaaaaaggtggaggaagggagaattcagtctcaacctgactctttgagatgggacaatggtcttctcctgccctcagactggaactca---gatcagcgctcctggttcgcaggctttcagactcacactgggactcacaccatcagccctcttg-ttctcaggctttcaggcttgtgctggagctcacaccactggctctcctgcttctcaggcttc---cagactcagattggaactacaccccccgttttt----------------------------------------ccacatctgtagcttgcaatgacagatggtgaatcttctcagc----------------------------------------caccatatgtacatatctattatctgtctcctattggttctgttcctctggagaactctgactTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101092452 905 + 187378091 CCATCTGACATCTCTCCCACAAAAGGACCTATTTAACATGAAGGCTGCTGAGActtattgtgatggttaa-----------------tttttt-----tttttttttgaaat--------------gcagtctcactctgttgcccaggctagagtgcagt------ggcacg------------atcttgg---ctcactgca--------------------------acctccacctccct--------------------------------------------------ggttcaagcaattctc--ctgcctcagccacccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------acgccacc-----atgcctggctaattttt--------------tgtgttt-ttagta----------gagacg-gggtttcaccatgttagcc--aggaaggtctcgatcttctgacctcgtaatctg-cctgccttggcctcccaaagtgctgggattacaggcg-taagccactgcgccatgatggttaat--tttatacgGCAATTTGACTGGgtcacagggtgcccagatatctggttaaac---atctctgggtgtgtctatgagggggCTTAAGGAGGAGATTAGTGTTTGAATCAATGGACTGAGTACA-CAGACAGCCCTTCCCAATGTGGGTGGGCAGTGTCCACTCTGCCAAGgacctgaataaaacaaaaaggtggaggaagggagaattCAGTCTCAACCTGGCTCTTTGAGATGGGACAAtggtcttctcctgccctcagactgGAACTCA---GATCAGCGGTCCTGGTTCGCAGGCTTTCAGACTCACACTGGGACTCACACCATCAGCCCTCTTG-TTCTCAGGCTTTCAGGCTTGTGCTGGAGCTCGCACCACTGGCTCTCCTGCTTCTCAGGCTTC---CAGACTCAGACTGGAACTACACCACCCGTTTTT----------------------------------------CCACATCTGTAGCTTGCAATGACAGATGGTGAATCTTCTCAGC----------------------------------------CACCATATGTACATATCTATTATCTGTCTGCTATTGgttctgttcctctggagaactctgacttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4957757 904 + 91754291 CCATCTGACATCTCTCCCACAAAAGGATCTATTTAACATGAAGGCTGCTGAGACTTGTTGTGATGGTTAA------------------ttttt-----tttttttttgaaat--------------gcagtctcactctgttgcccaggctagagtgcagt------ggcatg------------atcttgg---ctcactgca--------------------------acctccacctccct--------------------------------------------------ggttcaagcaattctc--ctgcctcagccttccaagtagc-------------------------------------------------tgggact------------------------------------acaggtgc---------acgccatc-----atgcccggctaattttt--------------tgtgttt-ttagta----------gagaca-gggtttcaccatgttagcc--aggaaggtctcaatcttctgacctcataatctg-cctgccttggcctcccaaagtgctgggattacaggcg-tgagtcaccgcaccAtgatggttaat--tttatacggcaatttgactgggtcacagggtgcccagatagctggttaaac---atctctgggtgtgtctatgagggaacttaaggaggagattagtgtttgaatcaatggactgagtaca-cagacggcccttcccaatgtgagtgggcagtgtgcactctgccaaggacctgaataaaacaaaaaggtggaggaagggagaattcactctcaacctgactctttgagatgggacaatggtcttctcctgccctcagactggaactca---gatcagcgctcctggttcgcaggctttcagactcacattgggactcacaccatcagcccttttg-ttctcaggctttcaggcttgtgctggagctcacaccactggctcttctgcttctcaggcttc---cagactcagactggaactacatcacccgttttt----------------------------------------ccacatctgtagcttgcaatgacagatggtgaatcttctcagc----------------------------------------ctccatatgtacatatctgttatctgtctcctgttggttctgttcctctggagaactctgactTG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24811649 1187 - 42124431 CTATCTGACTTCTCTTCTACAAAAAGATCTACTCAACAGAAAGGCTGA-GAGAC---TCATAATGGTTAATTTTACATGTCAGGTTTTTTTTTAAAGATTTTATTTAgggatccctgggtggcgcagcggtttggcgcctgcctttggcccagggcgcaatcctggagacccgggatcgaatcccatgtcgggctcccagtgcatggagcctgcttctccctctgcctgtgtctctgcctctctctctctgtgactatcataaataaataaaatttaaaaaaaaaaaaAATAACGAttttatttattctcgacagacacacacacacagacagaggcatagacacaggcagagagaagtaggctcaccatagggagctcgatgtgggactcgatccgggtctccaggatcaggccctgggccgaaagcaggtgccaaaccgctgagccacccagggatcccTGCATGACTGTTTCCTAAACGTAGACTGTGTTTGTTGACAGTTGCATTGTgagatgcaggctccatgcagggagcttgatgcgggtctcgatcccaggactccaggat----cgcgccctga---gccaacg----------gcaggcgctaaaccactgagccacccaggGGGATCCCttacatgtcagtttgactgggccacc-agtgctcagaaatttggttaaacctta-ctctgggtatgtctatg----------aagatgacatgagcatctgagtccacacactgagtaaagcagattgccctccccaatgtggttgggactcaccccatccatggagg-cctaaatagaacaaaaa-------gaaggaaggattcacactcagcctg-----ttaagctgggacatctgtcttctc---tcctgagactgagacttacgtgatcgatgctcctggttctcaagccttcagacatgaactggaact-acactaccagctttcctgagtttccagcttgcaga-------tggagatca------tgg------gacttctcagcctccataaacactcaaactgattccgcataataaatctctatgtgcatacatatgcatatGGTATATATAGTTTACCACGCCATATCTATAGTATGGAATAGTATATAGTGTATATGTATAGTATAGAGTATGCTATATATGGGGGGGGTGTATATGGGTATGCACCATAtgtatatctatataa------tactattggttctgttcctttggagagtcctaataca i canFam3.chr34 I 4 I 996 e ponAbe2.chr3 13809635 9858 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T a score=559770.000000 s hg38.chr3_KI270781v1_alt 78878 310 + 113034 taAAGATTTTAGggccaaacatggtggctcacatccgtaatcccagcactttgggaggccaaggtaggagaatcacttgaggccaagagtttgagatcagcttgggcaacatagctgtatacttccatctctacaaataattttaaaaattagccagacacggtggtgcatgcctctagtcctggctactcaagaagctgaggcaggaggatcacctgtgcac---agttcacagttgaaatgagctatgatcacagcactccactccagcctggctgacagagggagaccctgtctcaaaa------------atatatatata s panTro4.chr3 13828283 322 - 202329955 taAAGATTTTAGggccaaacatagtggctcacatccataatcccagcactttgggaggccaaggtaggagaatcacttgaggccaagagtttgagatcagcttgggcaacatagctgtatacttccatctctacaaataattttaaaaattagccagacatagtggtgcatgcctgtagtcctggctactcaagaagctgaggcaggaggatcacctgtgcac---agttcacagttgaaatgagctatgatcacagtactccactccagcctggctgacagagggagaccctgtctcaaaaatatatatatatatatatatata i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14361256 315 - 123690457 taAAGATTTTATggccaaacatggtggctcacatctgtaatcccagcactttgggagtccaaggtaggagaattacttgaggccaacagtttgagatcagcttgggcaacatagctgtagacttccatctctacaaataattttaaaaattagccagacatggtggtgcatgcctgtagtcctggctactcaagaggctgaggcaggaggatcacctgcgcacaggagttcacggttgaaatgagcgatgatcacatcactccactccagcctggctgacagagggagaccctgtctcaaaa----------aaatatatatata i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103656471 313 + 192599291 TAAAGATTTTAGggccaaacttggtggctcacatccataatcccagtgctttgggaggccaaggtagaagaatcacttgaggccaagagtttgagatcagcttgggcaacatagctgtagaccccgatctctacaaataattttaaaaattagccagacatgatggtgcatgcctgtagtcctggctactcaagaggctgaggcaggaggatgacctgcgcacaagagttcacggttgacatgagctatgatcacaccactccactccagcctggctgacagagggacaccctgtctcaaaa------------atatatatata i rheMac3.chr2 C 0 I 8240 s macFas5.chr2 103300549 313 - 192460366 TAAAGATTTTAGggccaaacttggtggctcacatccataatcccagtgctttgggaggccaaggtagaagaatcacttgaggccaaaagtttgagatcagcttgggcaacataactgtagaccccgatctctacaaataattttaaaaattagccagacatgatggtgcatgcctgtagtcctggctactcaagaggctgaggcaggaggatgacctgagcacaagagttcacggttgacatgagctatgatcacaccactccactccagcctggctgacagagggacaccctgtctcaaaa------------atatatatata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101093357 313 + 187378091 TAAAGATTTTAGGGCCAAActtggtggctcacatccataatcccagcgctttgggaggccaaggtaggagaatcacttgaggccaagagtttgagatcagcttgggcaacatagctgTAGACCCCgatctctacaaataatattaaaaattagccagacatgatggtgcatgcctgtagtcctggctactcaagaggctgaggcaggaggatgacctgCGCACAAGAGTTCACGGTTgacatgagctatgatcacaccactccactccagcctggctgacagagggacaccctgtctcaaaa------------aaatatatata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4958661 313 + 91754291 TAAAGATTTTAGggccaaacttggtggctcacatccgtaatcccagcgctttgggaggccaaggtaggagaatcacttgaagccaagagtttgagatcagcttgggcaacatagctgtagaccccgacctctacaaataattttaaaaattagccagatatgatggtgcatgcctgtagtcctggctactcaagaggctgaggcaggaggatcacctgcgcacaagagttcacagttgacatgagctatgatcacaccactccactccagcctggctgacagagggacaccctgtctcaaaa------------atatatatata i chlSab2.chr15 C 0 I 8706 e ponAbe2.chr3 13809635 9858 - 202140232 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1097.000000 s hg38.chr3_KI270781v1_alt 79188 2 + 113034 ta s panTro4.chr3 13828605 2 - 202329955 ta i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14361571 2 - 123690457 ta i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103300862 2 - 192460366 ca i macFas5.chr2 C 0 I 8825 s papAnu2.chr2 101093670 2 + 187378091 ca i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=546.000000 s hg38.chr3_KI270781v1_alt 79190 1 + 113034 t s panTro4.chr3 13828607 1 - 202329955 t i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14361573 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101093672 1 + 187378091 t i papAnu2.chr2 C 0 I 8297 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=73797.000000 s hg38.chr3_KI270781v1_alt 79191 305 + 113034 ggctgggcacggtggctcacgcctgtaatcccagcactttggaaggccgaggagggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggcgcggtggcgggtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcctgaacccaggaggcagagcttgcagtgagctgagatagcaccactgcactccagcctgggcgacagagcaagactccg-ctcaaaaaaaTAtgtgtgtgtgtgtgtg s panTro4.chr3 13828608 306 - 202329955 agctgggcacggtggctcacgcctgtaatcccagcactttggaaggccgaggagggcagatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccctgtctctattaaaaatacaaaaaattagccaggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccaggaggcagagcttgcagtgagctgagatcgcgtcactgcactccagcctgggagacagagcaagactccatctcaaaaaaaTATATGTGTGTGTGTATA i panTro4.chr3 C 0 I 39 s nomLeu3.chr11 14361574 306 - 123690457 ggccaggtgcagtggctcacgcttgtaatcccagcactttggaaggccgaggcaggcggatcacaaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctccattaaaaatacaaaaaattagccgggtgtggtggcgggcacctgtagtcccagctactctggaggctgaggcaggagaacggcctgaacccgggaggcggagcttacagtgagctgagatcacaccactgcaccccagcctgggcgacagagcgagactctgtctcaaaaaaagaaaaaaatatatctata i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=2705.000000 s hg38.chr3_KI270781v1_alt 79496 39 + 113034 tgtgtgtgtgtgtgtgtgtataaaatatgtgtatatata s nomLeu3.chr11 14361880 39 - 123690457 tatatgtgtgtgtgtgtatataaaatatgtatctatatt i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13828914 39 - 202329955 I a score=5618.000000 s hg38.chr3_KI270781v1_alt 79535 31 + 113034 --ttatatgt---atatatttaaatatatattatat s panTro4.chr3 13828953 31 - 202329955 --atatatgt---atatatttaaatatatattatat i panTro4.chr3 I 39 I 112 s nomLeu3.chr11 14361919 36 - 123690457 atatacatatttaatatatatacatatatattatat i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=239717.000000 s hg38.chr3_KI270781v1_alt 79566 935 + 113034 gtatatatttaaagatatatatatatttatttttttgagatggagtctcgctctgtcgccaggctggagtgcagtggcatgatctcggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcccgTgagaaac--aattttaagaatgagctttctgaattggttctaagatttctggcattgtctctctagtctgattaaatttaaagagactaacaactctgtttccagtaagaaagagagcactagtcgtccatggcatgatctgacaatggaaatatgcaaaatattcccactggatacacctaatcaaccacttataagaagccaggagctgggtgactatatataagatactttctaacctttttgaaaaactaatgaatataacaaggttggctacttgctcctagagtcactggacaaagaggtgaaagaaaagaatgagttcagggattcaaattcctagttcaaacgcggtgtaaataacctaaaagctactacatgtgccctgaaggagacccttatctcctgtcaccaaagcgctgagattactgaaaatcaggcagagaatcctgtgactggctggattacaacatggactgaacttccagcctcgcaggtgtctttaacaggtgtc-gctgtgaaagtgagggtgttgactggggaagaatggggtggggatgtgtaggaagacacgatgaagctgggaacagtgaacatctaagttttCGGGGTT-ttttgttttgttttgttttgttttgttttgtAAGAGACCAGGTCTTggccaggcacagtggttcatgcctacaatcccagcactttgggaggctactgtgggcagatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaacccaatctctattaaaaatccaaaaaa s panTro4.chr3 13829096 924 - 202329955 gtatatatttaaagatatatatatatttatttttttgagatggagtctcgctctgtcgccaggctggagtgcagtggcatgatctcggctcactgcaagctccgcctcctgggttcaagcaattctcctgcctcagcctcccgTgagaaac--aattttaagaatgagctttctgaattggttctaaggtttctggcattgtctctctagtctgattaaatttaaagagactaacaactctgtttccagtaaga--gagagcactagtcgtccatggcatgatctgaccatggaaatatgcaaaatattcccactggatacacctaatcaaccacttataagaagccaggagctgggtgactatatataagatactttctaacctttttgaaaaactgatgaatataacaaggttggctacttgctcctagagtcactggacaaagaggtgaaagaaaagaatgagttcagggattcaaatttctagttcaaatgcggtgtaaataacctaaaagctactacatgtgccctgaaggagacccttatctcctgtcaccaaagcgctgagattactgaaaatcaggcagagaatcctgtgactggccggattacaacatggactgaacttccagccttacaggtgtctttaacaggtgtctgctgtgaaagtgagggtgttgactggggaagaatggggtggggatgtgtaggaagacacgatgaagctgggaatagtgaacatctaagttttTGGGGGT-TTTTGTTTTGTTTTGTTTTCT----------AAGAGACCAGGTCTTggccaggcacagtggttcatgcctacaatcccagcactttgggaggctaatgtgggcagatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaacccaatctctattaaaaatccaaaaaA i panTro4.chr3 I 112 C 0 s nomLeu3.chr11 14361955 926 - 123690457 gtatatatttaa--atatatatatatttatttttttgagatggagtctcgctctgtcgccaggctggagtgcagtggcataatctcggctcactgcaacctccgcctcctgggttcgagcgattctcctgcctcagcctcccgTgagaaacagaattttaagaatgagctttctgaattggttctaagatttctagcattgtctctctagtctgaatagattt-aagagactaacagctctgtttccagtaagaaagagagcactagtcgcccatggcatgagctgacaatggaaatatgcaaaatattcccattggatacacctaatcaaccacttataagaagccaagagctgggtgactatatacaagatactttctaacgtttttgaaaaactaatgaatataacaaagttggctacttgctcctagagtcactggacaaagtggtgaaagaaacgaatgagttcagggattcaaattcctagttcaaacgcggtgtaaataacctaaaagctactatatgtgccctgaaggagacccttatctcctgtcgccaaagcgctgagattactgaaaatcaggcagagaatcctgtgactggccggattacaacacggactgaacttccagcctcacaggtgtcttcaacaggtgtctgctgtgaaagtgagggtgtcgactgggaaagaatgggatggggatgcgtaggaagactcgatgaagctaggaacagtgaacatctaagttttgGGGCTTGTTTTGTTTTGTTTTGTTTTCT----------AAGAGACCAGGTCTTggccgggcacagtggttcatgcctgcagtcccagcactttaggaggctaaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaactccatctgtactaaaaatacaaaaaa i nomLeu3.chr11 C 0 I 6058 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=254557.000000 s hg38.chr3_KI270781v1_alt 80501 2786 + 113034 aaaaaaaaaaaaaaaaGAGAGAGAGAGAGCAggtcttgctctgtcacacaggctggggtgcagtggtgcaattatagctcactgcagccttgaactcctgggctcaagtgacaatcctgcctcaacctcccaagtaactaggactacaggcacacaacactatgcccactaattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagatgggggtctcactatgttgcccagtctagtctggaactcctggcctcaagcaatccttctgcttcagcctcccaaagtgctgtgattgcaggtgtggtgagccattgcgcccagccAgagccccgaaattcttatgagtcttctttgccatggaagtagcctccccacctccacctg-gcgaactgactctgcattgccagaggaaactgtgatggcctcccttgagtcagttgcctttgcaaaacaatgctgattctcttcaggatccacccccaccacccctttttgcttctagacttcaagtctagactcaagtcccagcaagcccctcagatgaggtacaaaggttacccgtgaggaggtgtgctatacttcaaaagaacttcttaagttttctaatttctatagacagaaatctggggaacatgtatgggaatggatattgaggatgtgagataatagtgaaaaaaaacaagcagggtgcagtggttcacgcctgtaatcccagcagtttgggaggctgaggcgggtggatcacctgaagtcaggagttcaagaccagcctggccaacatggtgagactgccatctctactaaaaatacaaaattagcctggcatggtggtgcacacctgtaatcccagctactctggaggctgagcgggagaatcgcttgaacccaggaggtgaaggctgcagtgagctgagatcacgccactgcactccagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaaaaaaaaaaaagaaaagaaaagaaagaaactaaaaaaagaaaaagaaaaaacataaagttgtatcagagtgaatttattgacatgggctcactaagcagagatcctgcattttaatgttgcagctcagaaaataagaaaaggctctaacagtttttggttggttggctgatgagtggatcaaagatggcccactgttggccaggcactgtggctcacacctgtaatcccaacactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaaccccatctgtactaaaaatacaaaaaattagctgggcgtggtggtgggcacctgtaatcccagctactcaggagcctgaggcaggagaatcacttgaacccagaaggcagaggtgaagtgagccaagatcatgctactgcactacagcctgggcaacaagagtgaaactccgtctcaaaaagaaaacaaaaagggtgacccaccatgaacaaactggaaatggtggatggacatgacttggtttaatgtagaatggattcaaaggcgtaggaagatgggatgttcgcggggatttgtcatttaagacctactcaccaactaagacataaaagtacatcttctagacctactgggaaaggccagaagtcctgctttttaccaatactgtgagaaataaatttgtgatggagcctcagcaccttgaaagagctttgtaatccctcgtctccataggcagaacttacagcagtcactgaatttggaaacttaaatgtaatgggagtcatggatctcagggcgcagggaccaagtggcagcactccactgccacaggcgaggtg--aacatggttacggtgatggacagcagagtcacagcagctgaattgccaactcctgcagaccaatggcacaggctgttaagcatggcgttcctagaagtgaaatagatgggaagcctactgattacttgatccgtataagcagaaaagttctaagccaagttaacaaaagtctaatctgaatcataaaaacagagccAGGCCTGGCACAGTAgctcatgcaacaggtccaggctgctgtgcaggctgctctgctgcttgggccatatgatccagcagatccagtggtgcgtgaaatgtcagtggcagatagggatgctctctggagcctttggcaggcccctacaagtgaatttccttaggatttgggagcaaaactctgccatccttcacagattactctccttttgagaaacggctcctggcctgttactgggccttagatagatactgtgtgcctaaccatgggccatcaagttacctgagcttcccatcatgacctggatgttatctgacccatcaagccataaatttgggtgtgcacagcaatactccatcatgaaacggaagtggtatatacatgattgggcctgagaaagctctgtaggcattggtaaattacatgaagaattggcccaaaagcccacggtcctccactcctgctaccctgccttctctctcccagcctatgtctatggcctcatggggagttccctatcatcagttgacagaggaagagaagacttggggctggttcccagacggtgctgcagaatatgcaggcaccacctgatggtggacaattgcagcactatagttcctttctgggacacctccgaaggacagtgatgaagaggaatcctcccagcaggtagaaatttgagcagtgcatctggctgttcactttgcttcaaaggagaaatggtcagacatgcaattatatacccat s panTro4.chr3 13830020 2765 - 202329955 AAAAAAAAGA------CAGAGAGAGAGAGCAggtcttgctctgtcactcaggctgggatgcagtggtgcaattatagctcactgcagcctggaactcctgggctcaagtgacaatcctgcctcaacctcccaagtaactaggactacaggcacacaacactatgcccactaattgcgtgtgtgtgtgtgtgtgtgtgtgtgtgta--gagatgggggtctcactatgttgcccagtctagtctggaactcctggcctcaagcactccttctgcttcagcctcccaaagtgctgtgattgcaggtgtggtgagccattgcgcccagccAGAGCCCCGAAATTCTTATGAGTCTTCTTTACCAtggaagcagcctccccacctccatctgagcgaactaactctgcattgccagaggaaactgtgatggcctcccttgagtcagttgcctttgcaaaacaatgctgattctcttcaggatccacccccaccacccctttttgcttctagacttcaagcctagactcaagtcccagcaagtccctcagatgaggtacaaaggttacccgtgaggaggtgtgctatacttcaaaagaacttcttaagttttctaatttctatagacagaaatctggggaacatgtatgggaatggatattgaggatgtgagataatagtgaaaaaaaacaagcagggtgcagtggttcacgcctgtaatcccagcagtttgggaggctgaggcgggtggatcacctggagtcaggagttcaagaccagcctggccaacatggtgagactgccatctctactaaaaatacaaaattagcctggcatggtggtgcacacctgtaatcccagctactctggaggctgagcaggagaatcgcttgaacccaggaggtgaaggctgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaaaaaagaaaga---aagaaaagaaagaaactaaaaaaagaaaaagaaaaaacataaagttgtatcagagtgaatttattgacatgggctcgctaagcagagatcctgcattttaatgttgcagctcagaaaataagaaaaggctctaacagtttttggttggttggctgatgagtggatcaaagatggcccactgttggccaggcacggtggctcacacctgtaatcccaacactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaaccccatctgtactaaaaatacaaaaaattagctgggcgtggtggcgggcacctgtaatcccagctactcaggagcctgaggcaggagaatcgcttgaacccagaaggcagaggtgaagtg-------------ctactgcactacagcctgggcaacaagagtgaaactccgtctcaaaaagaaaacaaaaagggtgacccaccatgaacaaactggaaatggtggatggacatgacttggtttaatgtagaatggattcaaaggcgtaggaagatgggatgttcgcggggatttgtcatttaagacctactcaccaattaagacatacaagtacatcttctagacctactgggaagggccagaagacctgctttttaccaatactgtgagaaataaatttgtgatggagcctcagcaccttgaaagagctttgtaatccctcgtctccataggcagaacttacagcagtcactgaatttggaaacttaaatgtaatgggagtcatggatctcagggcgcagggaccaagtggcagcactccactgccacaggcaaggtgtgaacgtggttacggtgatggacagcagagtcacagcagctgaattgccaactcctgcagaccaatggcacaggctgttaagcatggcgttcctagaagtgaaatagatgggaagcctactgattacttgatccatataagcagaaaagttctaagccaagttaacaaaagtctaatctgaatcataaaaacagagCCAGGCCTGGCACAGTAgctcatgcaacaggtccaggctgccgtgcaggctgctctgctgcttgggccatatgatccagcagatccagtgatgtgtgaaatgtcagtggcagatagggatgctctctggagcctttggcaggcccctacaagtgaatttccttaggatttgggagcaaaactctgccatccttcacagattactctctttttgagaaacggctcctggcctgttactgggccttagatagatactgtgtgcctaaccatgggccatcaagttacctgagcttcccgtcatgacctggatgttatctgacccatcaagccataaatttgggtgtgcacagcaatactccatcatgaaacggaagtggtatatacatgattgggcctgagaaagctctgtaggcagtggtaaattacatgaagaattggcccaaaagcccacggtcctccactcctgctaccctgccttctctctcccagcctatgtctatggcctcatggggagttccctatcatcagttgacagaggaagagaagacttggggctggttcccagatggtgctgcagaatatgcaggcaccacctgatggtggacaattgcagcactacagttcctttctgggacacctccgaaggacagtgatgaagaggaatcctcccagcaggtagaaatttgagcagtgcatctggctgttcactttgcttcaaaggagaaatggtcagacatgcaattatatacccat i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 13809635 9858 - 202140232 I e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14362881 6058 - 123690457 I a score=300731.000000 s hg38.chr3_KI270781v1_alt 83287 1120 + 113034 ttatagactatggccagtggtttggctggatggtcagggactcagaaagaatatgaatggaaaaattggtgataaggaaatctgagaaagagatatatgggtagacctctctgaatggat-aaaaaacctgaagacatttgtgtcccatgtcaatgcccaccaaaaggcaacctcaacagagaaggatattaataatcaagtaaataggatgacttgttctatggataccaatcagcatctgatgacctaatgggctcattatcattgtcattgcctaatgggctcataacgaaagtgtctgtggctgggcgcggtggctcacgcctgtaatcccagcactttgggaagccaaggcaggcggatcacgaggtcaggagatcgagaccatcctggctgacatggtgaaaacccatttctactaaaaatacaaaaaaaaaaaaattagccgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaaaccagagaatggcctgaacccaggaggcggagcttccagtgagccgagattgggccactgcactccagcctgggcgacagagcaagacaccgtctcaaaaaaaaagaaagtgactgttgtggcagggatggaggatgcatgggctcagcagtgtagactaacactcaccaaggctgacctggctacagccatcactgagtgcccagtttgccagcagcagagaccaacactgagtctatgatatggcaccattctccacggtgaccagcctactatctggtcgcaggttgattacattggaccacttccatcatggaagaggcagcattttgttcttgctgggatagacacttactctggacacagatttacataccctgctcacaaatcttctgccaaaaccaccatccgtgaacttaaagtatgccttatccagtgaaattccatacagcattgtttccaaacactttacaacaaaagaagtgtggcaatgactcatgatcatgtaattcactggtcttatcatgttccccatcatcctgaaggagctggcttgatagaacagtttctatcaagttcttgatgactcagtttcagcactgaatagttggcaatattttgcaggg s panTro4.chr3 13832785 1120 - 202329955 ttatagactatggccagtggtttggctggatggtcagggactcagaaagaatatgaatggaaaaattggtgataaggaaatctgagaaagagatatatgggtagacctctctgaatggat-aaaaaacctgaagacatttgtgtcccatgtcaatgcccaccaaaaggcaacctcaacagagaaggatattaataatcaagtaaataggatgacttgttctatggataccaatcagcatctgatgacctaatgggctcattatcattgtcattgcctaatgggctcataacgaaagtgtctgtggctgggcgcggtggctcacgcctgtaatcccagcactttgggaagccaaggcaggtggatcacgaggtcaggagatcgagaccatcctggctgacatggtgaaaacccatttctactaaaaatacaaaaaaataaaaattagccgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaagccagagaatggcctgaacccaggaggcggagcttccagtgagccgagattgggccactgcactccagcctgggcgacagagcaagacaccgtctcaaaaaaaaagaaagtgactgttgtggcagggatggaggatgcatgggctcagcagtgtagactaacactcaccaaggctgacctggctacagccatcactgagtgcccagtttgccagcagcagagaccaacactgagtctatgatatggcaccattctccacggtgaccagcctactatctggtcgcaggttgattacactggaccacttccatcatggaagaggcagcattttgttcttgctgggatagacacttactctggacacagatttacgtaccctgctcacaaatcttctgccaaaaccaccacccatgaacttaaagtatgccttatccagtgaaattccatacagcattgtttccaaacactttacaacaaaagaagtgtggcaatgactcatgatcatgtaattcactggtcttatcatgttccccatcatcctgaaggagctggcttgatagaacagtttctatcaagttcttgatgactcagtttcagcactgaatagttggcaatattttgcaggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13819493 1106 - 202140232 ttatagactatggccagt-gtttggctggatggtcagggactcagaaagaatatgaatggaaaaattggtgataaggaaatttgagaaagagatatatgggtagacctctctgaatggacaaaaaaacctgaagacatttgtgtcccatgtcaatgcccaccaaaaggcaacctcaacagagaaggatattaataatcaagtaaataggatgacttgttctatggataccaatcagcatctgaccacctaatgggctcattatcattgtcattgcctaatgggctcataacgaaagtgtctgtggctgggcgcggtggctcatgcctgtaatcccagcactttgggaagccaaggcaggcggatcacgaggtcaggagattgagaccatcccagctaac---------acccgtttctactaaaaatacaaaaaa--aaaaattagccagacatggtggcgggcacctgtagtcccagctactcgggtggctgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagccaagattgggccactgcactccagcctgggtgacagagcgagacaccgtctcaaaaaaaaagaaagtgactgtggtggcagggatggaggatgcatgggctcagcagtgtggactaacactcactaaggctgacctggctacagccatcactgagtgcccagtttgccagcagcagagaccaacactgagtctatgatatggcaccattctccacggtgaccagcctactatctggtggcaggttgattacactggaccacttccatcatgcaagaggcagcattttgttcttgctgggatagacacttactctggacacagatttacgtaccctgctcacaaa---tctgccaaaaccaccatccatgaacttaaagtatgccttatccagtgaaattccatacagcattgtttccaaacactttacaacaaaagaagcgtagcaatgattcatgatcatgtaattcactggtcttatcatgttccccatcatcctgaaggagctggcttgatagcacagtttctatcaagttcttgatgactcagtttcagcactgaatagttggcaatattttgcaggg i ponAbe2.chr3 I 9858 C 0 e chlSab2.chr15 4958974 8706 + 91754291 I e papAnu2.chr2 101093673 8297 + 187378091 I e macFas5.chr2 103300864 8825 - 192460366 I e rheMac3.chr2 103656784 8240 + 192599291 I e canFam3.chr34 24812836 996 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14362881 6058 - 123690457 I a score=870337.000000 s hg38.chr3_KI270781v1_alt 84407 312 + 113034 caggAAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCCTACACAGCACCTGGGCCCGCCCCATGTGTGGGCCGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAACTCTTAGTAGGGACAGTCACTCATAATCCCCACTCCTCCACCCCTAAGCAGACTGCCGGCTGCTGCATGGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGTGGTGATGGCGTCCAGAGCCCTCCTGTGGGGCCAGCAGATCCTCTTCCCCC s panTro4.chr3 13833905 312 - 202329955 caggAAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCCTACACAGCACCTGGGCCCGCCCCATGTGTGGGCCGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAACTCCTAGTAGGGACAGTCACTCATAATCCCCACTCCTCCACCCCTAAGCAGACCGCCGGCTGCTGCATGGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGTGGTGATGGCGTCCAGAGCCCTCCTGTGGGGCCAGCAGATCCTCTTCCCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13820599 312 - 202140232 caggAAAGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCCTACACAGCACCTGGGCCCACCCCGTGTGTGGGCTGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGACGTGGCAAGCTCCTAGTGGGGACAGTCACTCATAATCCCCACTCCTCCACCCCCAAGCAGACCGCCGGCTGCTGCATGGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGTGATGATGGCGTCTAGAGCCCTCCTGTGGGGCCAGCAGATTCTCTTCCCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14368939 312 - 123690457 CAGGGAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCCCACACAGCACCTGGGCCCACCCCGCGTGTGGGCCTCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAGCTCCTAGTGGGGACAGTCACTTGTAATCCCCACTCCTCCACCCCCAAGCAGACTGCCGGCTGCTGCATGGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGTGCTGATGGCGTCCAGAGCCCTCCTGTGGGGCCAGCAGATCCTCTTCCCCC i nomLeu3.chr11 I 6058 C 0 s rheMac3.chr2 103665024 312 + 192599291 CAGGGAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCGCACACAGCACCTGGGCCCACCCCATGTGTGGGCAGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAGCTCCTAGTGGGGACAGTCACTCATAATCCCCACTCCTCCACCCCCAAGCAGACTGCTGGCTTCGGCACAGGCACTTTCCTGGGACACCTGATTCCAGCACAGACCATCTATTACTTGGGGCTTTACTGTGCGGTGATGGCATCGAGAGCCCTCCTGCGGGGCCAGCAGATCCTCTTCTCCC i rheMac3.chr2 I 8240 C 0 s macFas5.chr2 103309689 312 - 192460366 CAGGGAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCACACACAGCACCTGGGCCCACCCCATGTGTGGGCAGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAGCTGCTAGTGGGGACAGTCACTCATAATCCCCACTCCTCCACCCCCAAGCAGACTGCTGGCTGCGGCACAGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGCCGTGATGGCATCGAGAGCCCTCCTGCGGGGCCAGCAGATCCTCTTCCCCC i macFas5.chr2 I 8825 C 0 s papAnu2.chr2 101101970 312 + 187378091 CAGGGAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAATAGACCTGG-GCGCACACAGCACCTGGGCCCACCCCATGTGTGGGCAGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGGCAAGCTCCTAGTGGGGACAGTCGCTCATAATCCCCACTCCTCCACCCCCAAGCAGACTGCTGGCTGCGGCACAGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGCGGTGATGGCATCGAGAGCCCTCCTGCGGGGCCAGCAGATCCTCTTCCCCC i papAnu2.chr2 I 8297 C 0 s chlSab2.chr15 4967680 312 + 91754291 CAGGGAGGAGCCCAGCCAGTTCTCAGCTACCTGAAAACAGACCTGG-GTGCACACAGCACCTGGGCCCACTCCATGTGTGGGCAGCAGAGGCAGGTCAGCAGGGACTACCCTGACAGTTCAGAGGTGACAAGCTCCTAGTGGGGACAGTCACTCATAATCCCCACTCCTCCACCCCCAAGCAGACTGCTGGCTGCGGCACCGGCACTTTCCTGGGACACCTGATTCCAGCACTGACCATCTATTACTTGGGGCTTTACTATGCGGTGATGGCATCCAGAGCCCTCCTGTGGGGCCAGCAGATCCTCTTTCCCC i chlSab2.chr15 I 8706 C 0 s canFam3.chr34 24813832 306 - 42124431 CGGAGAGGACCCCAGCCAGTCCTCCACTGCCTGAAAGCAGACCTGGCACCCTCACCGGTCCTGTACCCTCCTGCCTTGTGGGCTGCAGAGCTGGGGCTGGCGGGCCTATTCTGGCAGTTGAAGGATG-CACGTGCCTCATAGGCAGAGTCACTCAC-ATTGTCGCTCCT-----CCCAAGCCGATGGGTGGCCAAGGCATAGGCCCTCTCATGGGACACCTGACTCTGGGACTGGTCACCCATTACATTGAGCTCTACTAGGTAAGGATGGTATCCCAGGCCCTCTTTCTGGCCCAGAAGCTCCTCTTCCTCC i canFam3.chr34 I 996 T 43994 e calJac3.chr15 92439687 13539 - 98464013 T a score=17880.000000 s hg38.chr3_KI270781v1_alt 84719 8 + 113034 GACTTCCC s panTro4.chr3 13834217 8 - 202329955 GACTTCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13820911 8 - 202140232 GACTTCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14369251 8 - 123690457 GACTTCCC i nomLeu3.chr11 C 0 I 406 s rheMac3.chr2 103665336 8 + 192599291 CACTTCCC i rheMac3.chr2 C 0 I 401 s macFas5.chr2 103310001 8 - 192460366 CACTTCCC i macFas5.chr2 C 0 I 398 s papAnu2.chr2 101102282 8 + 187378091 CACTTCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4967992 8 + 91754291 CACTTTCC i chlSab2.chr15 C 0 I 401 s canFam3.chr34 24770144 8 - 42124431 CTCTGCCC i canFam3.chr34 T 43994 C 0 e calJac3.chr15 92439687 13539 - 98464013 T a score=7200.000000 s hg38.chr3_KI270781v1_alt 84727 2 + 113034 CC s panTro4.chr3 13834225 2 - 202329955 CC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13820919 2 - 202140232 CC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14369665 2 - 123690457 CC i nomLeu3.chr11 I 406 C 0 s rheMac3.chr2 103665745 2 + 192599291 CC i rheMac3.chr2 I 401 C 0 s macFas5.chr2 103310407 2 - 192460366 CC i macFas5.chr2 I 398 C 0 s papAnu2.chr2 101102290 2 + 187378091 CC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968401 2 + 91754291 CC i chlSab2.chr15 I 401 C 0 s canFam3.chr34 24770152 2 - 42124431 CC i canFam3.chr34 C 0 I 407 e calJac3.chr15 92439687 13539 - 98464013 T a score=6876.000000 s hg38.chr3_KI270781v1_alt 84729 2 + 113034 AG s panTro4.chr3 13834227 2 - 202329955 AG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13820921 2 - 202140232 AG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14369667 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103665747 2 + 192599291 AG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310409 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101102292 2 + 187378091 AG i papAnu2.chr2 C 0 I 400 s chlSab2.chr15 4968403 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770561 2 - 42124431 AG i canFam3.chr34 I 407 C 0 e calJac3.chr15 92439687 13539 - 98464013 T a score=205359.000000 s hg38.chr3_KI270781v1_alt 84731 98 + 113034 GTCTGGGTCCC--------------------------TGACCAGCCCCAGCTCTGGGTTCTCAAGGCCTGGGTGCTC---CTGTTGCTTGGCTCCTGGTTGCTTCAGGGAGCCTCAGTGATGTACGC s panTro4.chr3 13834229 98 - 202329955 GTCTGGGTCCC--------------------------TGACCAGCCCCAGCTCTGGGTTCTCAAGGCCTGGGTGCTC---CTGTTGCTTGGCTCCTGGTTGCTTCAGGGAGCCTCGGTGATGTATGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13820923 124 - 202140232 GTCTGTGTCCCTTGACCAGCCCCAGCTCTGGGTCCCTTGACCATCCCCAGCTCTGGGTTCTCAAGGCCTGGGTGCTC---CTGTTGCTTGGCTCCTGGTTGCTTCAGGGAGCCTCAGTGATGTACGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14369669 98 - 123690457 GTCTGGGTCCC--------------------------TGACCAGCCCCAGCTCTGGGTTCTCAAGGCCTGGGTGCTC---CTATTGCTTGGCTCCTGGTTGCTTCAGGGAGCCTCAGTGATGTACGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103665749 80 + 192599291 GTCTGGGTCCC--------------------------TGACCAGCTCCAGCTCTGGATGCTCAAGGCCTGGGTGCTG---CTGTTTCTTGGCTCCTGGTTGC------------------TGTACAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310411 80 - 192460366 GTCTGGGTCCC--------------------------TGACCAGCTCCAGCTCTGGATGCTCAAGGCCTGGGTGCTG---CTGTTTCTTGGCTCCTGGTTGC------------------TGTACAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101102694 80 + 187378091 GTCTGGGTCCC--------------------------TGACCAGCTCCAGCTCTGGATGCTCAAGGCCTGGGTGCTG---CTGTTTCTTGGCTTCTGGTTGC------------------TGTACAC i papAnu2.chr2 I 400 C 0 s chlSab2.chr15 4968405 83 + 91754291 GTCTGGGTCCC--------------------------TGACCAGCCCCAGCTCTGGATGCTCAAGGCCTGGGTGCTGCCTCTGTTTCTTGGCTCCTGGTTGC------------------TGTACGC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770563 98 - 42124431 GTCTGGGTGCC--------------------------CGACCAGCCCGCGCTGTGGGTGCTCAAGACCTGGATGGGC---CTGGTGCTCAGCAGCTGGATGGTGCAGCTGTCTGTGCTGATGTACGC i canFam3.chr34 C 0 I 4 e calJac3.chr15 92439687 13539 - 98464013 T a score=683341.000000 s hg38.chr3_KI270781v1_alt 84829 250 + 113034 CCCA----CCGGACAGCCCTGGTGAGCAGTCAGCTACAAGAACCTGGCCTTCCTCATCATCTTCTTCTGCTGGCACCTGGGCTTGGGGATTGCCATGCTGGCTGCTGTCTATGGCCTCTGCAGCCTCTGGCACTGTCACTGCTCCTCCTGGACAGCATTCCCAGGGACCAGGTACCAGCCGTGCCTCGCACACCCCAGTGGAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT s panTro4.chr3 13834327 243 - 202329955 CCCA----CCGGACAGCCCTGGTGAGCAGACAGCCACAAGAACCTGGCCTTCCTCATCATCTTCTTCTGCTGGCACCTGGGCTTGGGGATTGCCATGCTGGCTGCTGTCTATGGCCTCTGCAGCCTCTGGCACTGTCACTGCTCCTCCTGGACAGCATTCCCAGGG-------ACCAGCCGTGCCTCGCACACCCCAGTGGAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821047 247 - 202140232 CCCA----CTGGACAGCCCTGGCCAGCAGACAGCCACGAGAACCTGGCCTTCCTCATCA---TCTTCTGCTGGCACCCGGGCTTGGGGATTGCCATGCTGGCTGCTGTCTGTGGCCTCTGCAGCCTCTGGCACTGTCACTGCTCCTCCTGGACAGCATTCCCGGGGACCAGGTACCAGCCGTGCCTCGCAGACCCCAGTGGAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAGCATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14369767 250 - 123690457 CCCA----CCGGACAGCCCTGGCGAGCAGACAGCCACAAGAACCTGGCCTTCCTCATCATCTTCTTCTGCTGGCACCTGGGCTTGGGGATGGCAGTGCTGGCTGCTGTCTATGGCCTCTGCAGCCTCTGGCACTGTCACTGCTCCTCCTGGACAGCATTCCCAGGGACCAGATACCAGCCGTGCCCCGTGGACCCCAGTGGAAGAGAACTCAAGAAACTCAGGACAGAGGCCATACTGCAGGATGAAAACATCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103665829 254 + 192599291 CCCACTATCCAGACAACCCTGGCGAGCAGACAGTCACACGGACCTGGCCTTCCTCACCATCTTCTTCTGCTGGCACCTGGGCCTGGGGGCTGCCATGCTGGCTGCTGTCTGTGGCCTCTGCAGCCTCTGGCACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGACCAGGTACCAGCTGTTTCCCATGGACCCCAGTGAAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310491 254 - 192460366 CCCACTATCCAGACAACCCTGGCGAGCAGACAGTCACACGGACCTGGCCTTCCTCACCATCTTCTTctgctggcacctgggcctgggggctgccatgctggctgctgtctgtggcCTCTGCAGCCTCTGGCACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGACCAGGTACCAGCTGTTTCCCATGGACTCCAGTGAAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101102774 248 + 187378091 CCCACTCTCCAGACAACCCTGGCGAGCAGACAGTCACACGGACCTGGCCTTCCTCACCA---TCTTCTGCTGGCACCTGGGCCTGGGGGCTGCCATGCTGGCTGTTGTCTGTGGCCTCTGCAGCCTCTGGCACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGACCAGGTACCAGCTGTTTCCCATGGACCCCAGTGAAAGAGAACTCAAGA---TCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968488 254 + 91754291 CCCACACTCCAGACAACCCTGGCGAGCAGACAGTCACACGGACCTGGCCTTCCTCACCATCTTCTTctgctggcacctgggcctgggggctgccatgctggctgctgtctgtggcctctgcagccgctggcACCATCACTGCTCCTCCTGGACAGCGTTCCCAGGGACCAGGTACCAGCTGTTTCCCATGGACCCCAGTGGAAGAGAACTCAAGAAACTCAGGGCAGAGGCCATGCTGCAGGATGAAAACATCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770665 250 - 42124431 CCCT----CTGGGCAGCCCTGGAGAGCGGAAAACCCCGAGGACCTGGCCTTCCTCCCCATCTTCTTCTGCTGGCACCTGGCCTTGGGGGCGGCCCTACTGGCCGCCGTCTATGGTCTCTGCAGCCTCTGGCACCATCGCTCCTCCTCTCGGAGAGAGGTCCCGGGCGCCAAGTACCGGCCGTGTCCCAGGGGCTACAGCAACGAAGACCTGGAGAAGCTGGGCGCCGAGGGCGTGCTGCGGGATGAGGGCGTCT i canFam3.chr34 I 4 I 59 e calJac3.chr15 92439687 13539 - 98464013 T a score=12992.000000 s hg38.chr3_KI270781v1_alt 85079 5 + 113034 CATTT s panTro4.chr3 13834570 5 - 202329955 CATTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821294 5 - 202140232 CATTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370017 5 - 123690457 CATTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103666083 5 + 192599291 CATTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310745 5 - 192460366 CATTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101103022 5 + 187378091 CATTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968742 5 + 91754291 CATTT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24770915 59 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=7628.000000 s hg38.chr3_KI270781v1_alt 85084 10 + 113034 AAAGACTGTC s panTro4.chr3 13834575 10 - 202329955 AAATACTGTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821299 10 - 202140232 AAAGACTGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370022 10 - 123690457 AAAGACTGTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103666088 10 + 192599291 AGAGGCTGTC i rheMac3.chr2 C 0 I 2 e chlSab2.chr15 4968747 0 + 91754291 C e papAnu2.chr2 101103027 0 + 187378091 C e macFas5.chr2 103310750 0 - 192460366 C e canFam3.chr34 24770915 59 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=143871.000000 s hg38.chr3_KI270781v1_alt 85094 314 + 113034 ATTCTggctgggcgtagtggctaacaaacacctgtaatcccgttactttgggaggccaaggcaggcggatcacaaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctc--cactaaaaaatacaaaaaattagccaggggtggtggtgggtgcctgtagtctcagctactcaggaggctgaggcaggagaatggcatgaacctgggaggcagagcttacagtgagccgagatcacgccactgcactccagcctgggcgacagagggagactccgtctcaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr3 13834585 304 - 202329955 ATTCTggctgggcgtggtggct----cacacctgtaatcccattactttgggaggccgagacaggcggatcgcaaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctc--taccaaaaaatacaaaaaattagccaggggtggtggcgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatcacgccactgcactccagcctgggcgacagagggagactccatctc------aaaaaaaaaataaaata i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821309 308 - 202140232 ATTCTggccgggcgtggtggct----caggcctgtaatcccagcactttgggaggccgaggcaggcggatcgcgaggtcaggagattgagaccatcctggctaacacagtgaaaccccgtctctatactaaaaaatacaaaaaattagccaggcgtggtggcgggcatctgtagtcccagctacttgggaggctgaggcaagagaatggcgcgaacccgggaggtggagcttgcagtgagccgagatcatgccactgcactccagcctggatgacacagcgagactctgtctc----aaaaaaaaaaaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370032 300 - 123690457 ATTCTggctgggcgtggtggct----cacacctgtaatcccagcactctgggagcccgagggaggcagatcacaaagtcaggagattgagaccatcctggctaacatggtgaaaccccgtctc--tactaaaaaatacaaaaaattagccaggtgtggtggtgggcccctgtagtcccagccacttgggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccaagatcatgccactgcactccagcctgggcaacagagcgagactctgtctc----------aaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4968747 0 + 91754291 C e papAnu2.chr2 101103027 0 + 187378091 C e macFas5.chr2 103310750 0 - 192460366 C e rheMac3.chr2 103666098 2 + 192599291 I e canFam3.chr34 24770915 59 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=16809.000000 s hg38.chr3_KI270781v1_alt 85408 12 + 113034 aaaGACTGTCAT s panTro4.chr3 13834889 12 - 202329955 aaaGACTGTCAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821617 12 - 202140232 aaaGACTGTCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370332 12 - 123690457 aaaGACTATCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103310750 12 - 192460366 AGAGGCTGTTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101103027 12 + 187378091 AAAGGCTGTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968747 12 + 91754291 AAAGGCTGTCCT i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103666098 2 + 192599291 I e canFam3.chr34 24770915 59 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=121106.000000 s hg38.chr3_KI270781v1_alt 85420 52 + 113034 TCTGTCCCCAGCTGTGCTGTGCTACCCCTGTAAGAAGCTTTGGGAGGTTG-CC s panTro4.chr3 13834901 52 - 202329955 TCTGTCCCCACCTGTGCTGTGCTACCCCTGTAAGAAGCTTTGGGAGGCTG-CC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821629 52 - 202140232 TCTGTCCCCAGCTGTGCTGTGCTACCCCTGTAAGAAGCTTTGGGAGGCTG-CT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370344 52 - 123690457 TCTGTCCCCAGCTGTGCTGTGCTACCCCTGTAAGAAGCTTTGGGAGGCTG-CC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103666100 53 + 192599291 TCTGTCCCCAGCTGTGCTGTGCTATCCCTGTAAGAACTTTTGGGAGGCTGCCC i rheMac3.chr2 I 2 C 0 s macFas5.chr2 103310762 53 - 192460366 TCTGTCCCCAGCTGTGCTGTGCTATCCCTGTAAGAACTTTTGGGAGGCTGCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101103039 53 + 187378091 TCTGTCCCCAGCTGTGCTGTGCTATCCCTGTAAGAACTTTTGGGAGGCTGCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968759 53 + 91754291 TCTGTCCCCAGCTGTGCTGTGCTACCCCTGTAAGAACTTTTGGAAGGCCGCCC i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24770915 59 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=261390.000000 s hg38.chr3_KI270781v1_alt 85472 101 + 113034 ACTGGGTGAGTGATCCTGTCATGTTCTGGGATCCACAGTGTGGATCCCCATCTCTGCAGCCATGTTCCTTGTCCCCAAATAAACCTGCCAGCTCCTAGGAT s panTro4.chr3 13834953 101 - 202329955 ACTGGGTGAGTGATCCTGTCATGTTCTGGGATCCACAGTGTGGATCCCCATCTCTGCAGCCATGTTCCTTGTCCCCAAATAAACCTGCCAGCTCCTAGGAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821681 101 - 202140232 ACTGGGGGAGTGATCCTGTCGTGTTCTGGAATCCACAGTGTGGCTCCCCATCTCTGCAGCCGTGTTCCTTGTCCCCACATAAACCTGCCAGCTCCTAGGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370396 101 - 123690457 ACTGGGTGAGTGATCCTGTCATGTTCTGGGATCCACAGTGTGGCTCCCCATCTCTGCAGCCATGTTCCTTGTCCCCAAATAAACCTGCCAGCTCCTAGGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103666153 101 + 192599291 ACTGGGTGAGTGATCCTGTCGTGTTCTGAGATCCACAGTGTGGCTCCCCATCTCTGCAGCCATGGTTCTTGTCCCCAGACAAATCTGCCAGCTCCTAAGAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310815 101 - 192460366 ACTGGGTGAGTGATCCTGTCGTGTTCTGAGATCCACAGTGTGGCTCCCCATCTCTGCAGCCATGGTTCTTGTCCCCAGACAAATCTGCCAGCTCCTAAGAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101103092 101 + 187378091 ACTGGGTGAGTGAGCCTGTCGTGTTCTGAGATCCACAGTGTGGCTCCCCATCTCTGCAGCCATGGTTCTTGTCCCCAAACAAATCTGCCAGCTCCTAAGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968812 99 + 91754291 ACTGGGTGAGTGATCCTGTCGTGTTCTGAGATC--CAGTGTGGCTCCCCATCTCTGCAGCCTTGGTTCTTGTCCCCAAACAAATCTGCCAGCTCCTAGGAT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24770974 101 - 42124431 ACGGTGCACGCAGCACGGAGATGTCTCAGGATCCACGACGGGGCTTTCTGTCACAGGCGTCACCTTCCTTGTTCCTCAATAAACCTTTCAGCTCCTGGGGT i canFam3.chr34 I 59 I 47906 e calJac3.chr15 92439687 13539 - 98464013 T a score=2531676.000000 s hg38.chr3_KI270781v1_alt 85573 1108 + 113034 GGTTTTTTACACTGTCCCTCTATCAGACTTTGTGTCTGCCTGGTTTATTCTGTGGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGCCTTCTCTGG-CACCTCTGAAATCCAGGAGGGGTACCAGCATGGAGAACTGGGAGGGTGTGAGCATAGATTGGGTGGCTAGTCAAGTTTCCCAGCTCTATTCCACACTGATGTCTGCTAGGAAAGGTTCCTCTTCCTT---GTTGTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTGAGGATAAAGCTAC-TTTTTTaaagtaaggcaattatagacacaaaatttagaaagacacacccctc-----aggagaggggaggaagggaggcagcagaatagaacatggtgggaactcagaggaagaggaggttctcaataatggcttagttcttaaaatgaggggtaggtttatgggtatATAAATAGGTCACTAAAATAAAAGAATAAGC----ACTggccgggcatggtggctcacacctgtaatcccagcactttgggaagccaaggtgggtgcatcacctgaggtcaggagttcaagaccagcctgggcaacatggcaaaaccccatctctactaaaattacaaaaatacaaaaattagctgggcatggtggcaggtgcctgtagtcccagctacatgggaggctgagacaggagaattgcttgaaccaaggaggcggaggttgcagtgagccgagatcacgccactgcactccagcgtgggtgacagagcgagactccgactcgaaaagaaaaag-aaaaaaaaaaagaaTAAGCAAGGGCCAACGAAGGGAGCGTGTCGTGAACCAAGGTCGTCATTATTCTAGCACACCGAAGGTACACCCATTTCAAACCATGTGAGCTGTGAGTAGGCACAGGGTTGGGTCGCTGGGGTGGGAAAGGCTGCAGGCGCTTGTGCCTAAGGATGTTTAACATGAGAGAGCTGGAATCCATAATAATGGTTCGCATCCACCCTTGTATGATCATCAGGATCTCAGACTTCCTCATTTTACTCTGTCCATTTCATTTTTGCTTTTATTTTTTATGTTAATTGTAGGCAAATTAACACCTTGTTTAAAAAATAAACT s panTro4.chr3 13835054 1104 - 202329955 GGTTTTTTACACTGTCCCTCTATCAGACTTTGTATCTGCCTGGTTTATTCTGTGGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGCCTTCTCTGG-CACCTCTGAAATCCAGGAGGGGTACCAGCATGGAGAACTGGGAGGGTGTGAGCATAGATTGGGTGGCTAGTCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAGGTTCCTCTTCC------TTGTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTGAGGATAAAGCTAC-TTTTTTaaagtaaggcaattatagacacaaaatttagaaagacacacccctc-----aggagaggggaggaagggaggcagcagaatagaacatggtgggaactcagaggaagaggaggttctcaataatggcttagttcttaaaatgaggggtaggtttatgggtatATAAATAGGTCACTAAAATAAAAGAATAAGC----ACTggccgggcatggtggctcacgcctgtaatcccagcactttgggaagccaaggtgggtgtatcacctgaggtcaggagttcaagaccagcctgggcaacatggcaaaaccctatctctactaaaattacaaaaatacaaaaattagctgggcatggtggcaggtgcctgtagtcccagctacatgggaggctgagacaggagaattgcttgaaccaaggaggcggaggttgcagtgagccgagatcacaccactgcactccagcatgggtgacagagcgagactccgactcaaaaagaaaaag--aaaaaaaaaagaataaGCAAGGACCAATGAAGGGAGCATGTCGTGAACTAAGGTCGTAATTATTCTAGCACACCCAAGGTACACCCATTTCAAACCATGTGAGCTGTGAGTAGGCGCAGGGTTGGGTCGCTGGGGCGGGAAAGGCTGCATGCGCTTGTGCCTAAGGATGTTTAACATGAGAGAGCTGGAATCTATAATAATGGTTCACATCCACCTTTGTATGATCATCAGGATCTCAGACTTCCTCATTTTACTCTGTCCATTTCATTTTTGCTTTTATTTTTTATGTTAATTGTAGGGAAATTAACACCTTGTTTAAAAAATAAACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13821782 1110 - 202140232 GGCTGTTTACACTGTCCCTCTATCAGACTTTGTGTCTGCCTGCTTTATTCTGTGGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGCCTTCTGTGGCCACCTCTGGAATCCAGGAGGGGTACCAGCATGGAGAACTGGGAGGGCGTGAGCATAGATTGGGTGGCTAGTCAAGCTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAGGTTCCTCTTCCTT---GTTGTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTGGGGATAAAGCTAC-TTTTTTAAAGCAAGGCAATTATAGACACAAAATTTAGAAAGACACACCCCTC-----AGGAGAGGGGAGGAAGAGAGGCAGCAGAATAGAACATGGCGGGAACACAGAGGAAGAGGAAGTTCTCAATAATGGCTTCGTTCTTAAAATTAGGGGTAGGTTTATGGGTATATAAATAGGTCACTAAAATAAAAGAATAAGC----ACTggccaggcatggtggctcatgcctgtaatcccagcactttgggaagccaaggtgggcagatcacccgaggtcaggagttcaagaccagcctgggcaacatggcaaaaccccatctctactaaaattacaaaaatacaaaaattagctgggtatggtggcaggtgcctgtaaccccagctgcatgggaggctgagacaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccaccgcactccagcgtgggtgacagagcaagactccgtctcaaaaagaaaaagaaaaaaaaaaaagaataaGCAAGGACCAATGAAGGGAGCATGTCGTGAACCAAGGTCGTAATTACTCTAGCACACCCAACGTACACCCATTGCAAACCACGTGAGCTGTGAGTAGGCACAGGGTTGGGTCGCTGGGGCGGGAAAGGCTGCATGCGCTTGTGCCTAAGGATGTTTAACATGAGAGAGCTGGAATCCATAATAATGGTTCACATCCACCCTTGTATGATCATCAGGATCTCAGACTTCCTCATTTTACTCTGTCCATTTCATTTTTGCTTCTATTTTTTATGTTAATTGTAGGAAAATTAACACCTTGTTTAAAAAATAAACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14370497 1111 - 123690457 GGCTTTTTACACTGTCCCTCTATGAGACTTTGTGTCTGCCTGGTTTATTCTGTGGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGCCTTCTCTGGCCACCTCTGGAATCCAGAAGGGGTACCAGCATGGAGAACTGGGAGGGTGTGAGCATAGACTGGGTGGCTAGTCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAGGTTCCTCTTCCTTGTCGTTCTTCTTGAAAAGCAGATTGGCTATCCCCAAAATTGGGGATAAAGCTAC-TTTTTTaaagtaaggcaattatagacacaaaatttagaaagacacacccctc-----aggagaggggaggaagggaggcagcagaatagaacatggtgggaacacagaggaagaggaaggtctcaataatggcttagttcttaaaattaggagtaggtttatgggtgtATAAATAGGTCACTAAAATAAAAGAATAAGC----ACCggtcaggcatggtggctcacgcctgtaatcctagcactctgggaagccaaggtgggcatatcccctgaggtcaggagttcaagaccagcctgggcaacatggcaaaaccccatctctactaaaattacaaaaatacaaaaattagctgggcatggtggcaggtgcctgtagtcccagctacatgggaggctgagacaggagaattgcttgaacccaggaggtggaggttgcagtgagccgagattgtaccactgcgctccagcgtgggtgacagagcaagactctgtctcaaaaagaaaaag--aaaaaaaaaagaataaGCAAGAATCAATGAAGGCAGCATGTCGTGAACCAAGGTCGTAATTATTCTAGCACACCCAAGGTGCACCCATTTCAAACCATGTGAGCTGTGAGTAGGCTCAGGGTTAGGTCGCTGGGGCGGGAAAGGCTGCCTGCGCTTGTGCCTAAGGATGTTAAACGTGAGAGAGATGGAATCCATAATAATGGTTCACGTCCACCTTTGTATGATCATCAGGATCTCAGACTTCCTCATTTTACTCTGTCCAtttcatttttgtttttattttttatcttaattGTAGGAAAATTAACACCTTGTTTAaaaaataaact i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103666254 1099 + 192599291 GCCTTTTTATGCTGCCCCTCTATCAGACTTTTTGTCTGCCTGGTTTATTCTGTAGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGACTTCTCTGGCCACCTCTGGAATCCAGGAGGGGTACCAGCAGGGGGAAGTGGGAGCGGATGAGCATGGATTGGGTGGCTAGCCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAATTTCCCCTTCCTTGTTGTTCTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTTGGGATAAAGCTACTTTTTTTaaagtaaggcaattatagacacaaaatttagaaagacacgtccctc-----aggagaggagaggaagggaggcagcagaatggaacatggtgggaacacagaggaagaggaggttctcgataatgtcttagttcttaaaactagcgataggttt-caggtatacaAATAGGTCACTAAAATAAAATAATAAGCAAGGACCAgccaggcgtggtggctcatgcctgtaatcc-agcactttgggaggcctaggcgggcggatcacctgaggtcaggaattcaagaccagcctgggcaacatgacaaaaccccatctctact--------aaaaacacaaaaactagctaggcgtgggggcagatgcctgtagtcccagctactcgggaggctgagataggagaattgcttgaaccagggaggaggaggttgcagtgagccgagatcacaccaccacattctagtccgggtgacagagcaagactccgtct-------aaaaaa--aaaaaaaaaagaataaGCAAGGACCAATGAAGGGAGCATGTCATGAACCAATGTCGTAATTATTCTAGCACACCCAAGGTACACCCATTTCAAACCATGTGAGCTGCGAGTAGGCACAGGGTTGGGTCGCTGGAGTGGGAAAGACTGCATGCGCTTATGCCTAAGGATGTTTACCATGAGAGAGATGGAATCCAAAATAATGGTTCACATCCACCTTTGTATGATCATCAGAATCTCAGACTTCCTCATTTTACTCTGTCCATTTCCTTTTTGTTCTTAGTTTTTATGTTAATTGTAGGAAAGTTAACACCTTGTTTAAAAAGTAAACT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103310916 1099 - 192460366 GCC-TTTTATGCTGCCCCTCTATCAGACTTTTTGTCTGCCTGGTTTATTCTGTAGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGACTTCTCTGGCCACCTCTGGAATCCAGGAGGGGTACCAGCAGGGGGAAGTGGGAGCGGATGAGCATGGATTGGGTGGCTAGCCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAATTTCCCCTTCCTTGTTGTTCTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTTGGGATAAAGCTACTTTTTTTaaagtaaggcaattatagacacaaaatttagaaagacacgtccctc-----aggagaggagaggaagggaggcagcagaatggaacatggtgggaacacagaggaagaggaggttctcgataatgtcttagttcttaaaactagggataggttt-caggtatacaAATAGGTCACTAAAATAAAATAATAAGCAAGGACCAgccaggcgtggtggctcatgcctgtaatcc-agcactttgggaggcctaggcgggcggatcacctgaggtcaggagttcaagaccagcctgggcaacatgacaaaaccccatctctact--------aaaaacacaaaaactagctaggtgtggtggcaggtgcctgtagtcccagctactcgggaggctgagataggagaattgcttgaaccagggaggaggaggttgcagtgagccgagatcacaccaccacattctagtctgggtgacagagcaagactctgtct------aaaaaaa--aaaaaaaaaagaaTAAGCAAGGACCAATGAAGGGAGCATGTCATGAACCAATGTCGTAATTGTTCTAGCACACCCAAGGTACACCCATTTCAAACCATGTGAGCTGCGAGTAGGCACAGGGTTGGGTCGCTGGAGTGGGAAAGGCTGCATGCGCTTATGCCTAAGGATGTTTACCATGAGAGAGATGGAATCCAAAATAATGGTTCACATCCACCTTTGTATGATCATCAGAATCTCAGACTTCCTCATTTTACTCTGTCCATTTCCTTTTTGTTCTTAGTTTTTATGTTAATTGTAGGAAAGTTAACACCTTGTTTAAAAAGTAAACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101103193 1101 + 187378091 GCCTTTTTATGCTGCCCCTCTATCAGACTTTTTGTCTGCCTGGTTTATTCTGTAGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGACTTCTCTGGCCACCTCTGGAATCCAGGAGGGGTACCAGCAGGGGGAAGTGGGAGCGGATGAGCATGGATTGGGTGGCTAGCCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAATTTCCCCTTCCTTGTTGTTCTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTTGGGATAAAGctactttttttaaagtaaggcAATTATAGACACAAAATTTAGAAAGACACGTCcctcaggagaggagaggagaggaagggaggcagcagaatggaacatggtgggaacacagaggaagaggaggttCTCGATAATGTCTTAGTTCTTAAAACTAGGGATAGGTTT-CAGGTATACAAATAggtcactaaaataaaataataagcaaggaccagccaggcgtggtggttcatgcctgtaatcc-agcactttggaaggcctaggcgggcggatcacctgaggtcaggagttcaagaccagactgggcaacatgacaaaaccccatctctact--------aaaaacacaaaaactagctaggcgtggtggcaggtgcctgtagtcccagctactcgggaggctgagataggagaattgcttgaatcagggaggaggaggttgcagtgagccgagatcacaccaccacattctagtccgggtgacagagcaagactccgtct--------aaaaa--aaaaaaaaaagaataagcaaggACCAATGAAGGGAGCATGTCATGAACCAAGGTCGTAATTGTTCTGGCACACCCAAGGTACACCCATTTCAAACCATGTGAGCTGCGAGTAGGCACAGGGTTGGGTCGCTGGAGTGGGAAAGGCTGCATGCGCTTATGCCTAAGGATGTTTACCGTGAGAGAGATGGAATCCATAATAATGGTTCACATCCACCTTTGTATGATCCTCAGAATCTCAGACTTCCTCATTTTA--CTGtccatttcctttttgtttttagtttttatgttaaTTGTAGGAAAGTTAACACcttgtttaaaaagtaaact i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4968911 1095 + 91754291 GCCTTTTTATGCTGCCCCTCTATCAGACTTTTTGTCTGCCTGGTTTATTCTGTAGCTGTGGTTTCCAGGACTCTCTGAGGGCAGCCAGGTGACTTCTCTGGCCACCTCTGGAATCCAGGAGGGGTACCAGCAGGGGGAAGTGGGAGGGGATGAGCATGGATTGGGTGGCTAGCCAAGTTTCCCAGCTCTATTCCACACTGATATCTGCTAGGAAAATTTCCCCTTCCTTGTTGTTCTTCTTGAAAAGCAGATTGGCTATTCCCAAAATTTGGGATAAAGCTACTTTTTTTaaagtaaggcaattacagacacaaaatttagaaagacacgtccctc-----aggagaggagaggaagggaggcggcagaatggaacatggtgggaacacagaggaagaggaggttctcgataatgtcttagttcttaaaactagggataggttt-caggtatATAAATAGGTCACTAAAATAAAATAATAAGCAAGGACCAgccaggcgtggtggctcatgcctgtaatcc-agcactttgggaggcctaggcgggcggatcacctgaggtcaggagttcaagaccagcctgggcaacatgacaaaaccccatctctact--------aaaaacacaaaaactagctaggcgtggtggcaggtgcctgtagtcccagctactcgggaggctgagataggagaattgcttgaaccagggaggaggaggttgcagtgagccgagatcacaccaccacattctagtctgggtgacagagcaagactccgtca----------aaa--aaaaaaaaaagaataaGCAAGGACCAATGAAGGGAGCATATCATGAACCAAGGTCGTCATTGTTCTAGCACACCCAAGGTACACCCATTTCAAACCATGTGAGCTGTGCGTAGGCACAGGGTTGGGTCGCTGGAGTGGGAAAGGCTGCATGCGCTTATGCCTAACGATGTTTACCATGAGAGAGATGGAATCCATAATGATGGTTCACATCCACCTTTGTATGATCATCAGAATCTCAGACTTCCTCA-TTTACTCTGTCCATTTCCTTTTCGTTTTTAGTTTTTATGTTAATTGTAGGAAAGTTAACACCTTGTTTAAAAAGTAAACT i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24771075 47906 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=529602.000000 s hg38.chr3_KI270781v1_alt 86681 294 + 113034 GG-Tgggcatggtgcctcacacctgtaatccctgcactttgggaagctaaggtgggagggttgcttgagtccaggagcttgagaccagcctggacaacatagtgagaccctgtctctacaaaaataaaaaatattagctgagcatggtggcatgcacctgtagttctagctactagggaggctggggcaggaggattgcttgagaccaggaggtcagggctgcggtgagccacaatcatgccactgcaccgtagcttgggtggcagagaaagactgtctcttaaaaacaaaacaa s panTro4.chr3 13836158 294 - 202329955 GG-Tgggcacggtgcctcacacctgtaatccctgcactttgggaagctaaggtgggagggttgcttgcgtccaggagcttgagaccagcctggacaacatagtgagaccctgtctctacaaaaataaaaaatattagctgagcatggtggcatgcacctgtagttctagctacttgggaggctggggcaggaggattgcttgagaccacgaggtcagggctgcagtgagccacaatcatgccactgcatcgtagcttgggtggcagagaaagactgtctcttaaaaacaaaacaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13822892 294 - 202140232 ggctgggcatggtgcctcacacctgtaatccctgcactttgggaagctgagatgggagggttgcttgagtccaggagcttgagaccagcctggacaacatagtgaggccctgtctctacaaaaat-aaagatattagctgagtatggtggcatgcacctgtagttctagctacttgggaggctggggcaggaggactgcttgagaccaggagatcagggctgtagtgagccacaatcatgccactgcactgtagcttgggtggcagagaaagactgtctcttaaaaacaaaacaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103667353 295 + 192599291 ggctgggcatggtggctcacacctgtaatcccagcactttgggaagctgaggtgggagcgtagcttgagtccaggagttggagaccagcctggacaacatagtgagaccctgtctctgcaaaaataaaaaatattagctgagcatggtgtcatgcacctgtagttctagctacttaggaggctggggcaggaggattgcttgagaccaggaagtcagggctgcagtgagccatggtcatgccactggactggagcttgggcagcagagcaagactgtctcttaaaaacaaaacaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103312015 295 - 192460366 ggctgggcatggtggctcacacctgtaatcccagcactttgggaagctgaggtgggagggtagcttgagtccaggagttggagaccagcctggacaacatagtgagaccctgtctctgcaaaaataaaaaatattagctgagcatggtgtcatgcacctgtagttctagctacttgggaggctggggcaggaggattgcttgagaccaggaggtcagggctgcagtgagccatggtcatgccactggactgtagcttgggcagcagagcaagactgtctcttaaaaacaaaacaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101104294 295 + 187378091 ggctgggcacggtggctcacacctgtaatcccagcactttgggaagctgaggtgggagggtagcttgagtccaggagttggagaccagcctggataacatagtgacaccctgtctctgcaaaaataaaaaatattagctgagcatggtgtcatgcacctgtagttctagctacttgggaggctggggcaggaggattgcttgagactaggaggtcagggctgcagtgagccatggtcatgccactggactgtagcttgggcagcagagcaagactgtctcttaaaaacaaaacaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4970006 295 + 91754291 gactgggcacggtggctcacacctgtaatcccagcactttgggaagctgaggtaggagagtagcttgagtccaggggttggagaccagcctggacaacatagtgagaccctgtctctgcaaaaataaaaaatattagctgagcatggtgtcatgcacctgtagttctagctacttgggaggctggggcaggaggattgcttgagaccaggaggtcagggctgccgtgagccatgatcatgccactggactgtagcttgggcagcagagcaagactgtctcttaaaaacaaaacaa i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24771075 47906 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14371608 0 - 123690457 C a score=656814.000000 s hg38.chr3_KI270781v1_alt 86975 289 + 113034 ggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcagatggatcacttgaggtcaggagttcaagatcagcctggctaacatggcaaaatcttg------tcgctactaaaaatacaaaaattagccaggtgtgctggcggacgccagtaatcccagctactcgggaggctgaggcaggagaattgcttaaactcaggaggcggaggttgcagtgagccgagattgtgccattgcactccagcctgggtgacaga-tgagactccgtctcaaaataa--a s panTro4.chr3 13836452 282 - 202329955 ggctgggcacggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacgtgaggtcaggagttcaagatcagcctggctaacatggcaaaaccttg------tcgctactaaaaatacaaaaattagccgggtgtgctggtgcacaccagtaatcccagctactcgagaggctaaggcaggagaattgcttaaactcaggaggcggaggttgcagtgagccgagattgtgccattgcactccagcctgggtgacagagtgagactccgtctc---------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13823186 290 - 202140232 ggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccaagacaggtggatcacttgaggtcaggagttcaagatcagcctggttaacatggcaaaacctcg------tcgctattaaaaatacaaaaattagctgggtgtgctggtgcatgccggtaatcccagctactcgggaggctgaagcaggaaaattgcttgaactcaggaagcggaggttgcagtgagctgagattgtgccattgcactccagcctgggtgacagagtgagactctgtctcaaaataa--a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14371608 296 - 123690457 ggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggtggatcacttgaggtcaggagttcaagatcagcctggctaacatggcaaaacatggctaacatggctactaaaaatacaaaaattagccgggtgtgctggtgcatgccagtaatcccagctactcgggaggcggaggcaggagaattgcttaaactcaggaggcggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagtgagactccatctcaaaataa--a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103667648 290 + 192599291 TTccgggcacggtggctcacacctgtaatcccagaactttgggaggctaaggcaggtggatcacttgaggtcaggagttcaagatcagcctggccaacatgacgaaacctcg------tcgctactaaaaatacaaaaattagccaggtatgctggtgcacgctgataatcctagctactcgggaggctgaggcaggagaattgcttgaactcaggaggcagaggttgcaatgagtcgagatcatgccattgcactccagcctgggtgacagaatgagactctgtTGCAaaataaa-- i rheMac3.chr2 C 0 I 303 s macFas5.chr2 103312310 289 - 192460366 TTccgggcacggtggctcacacctgtaatcccagaactttgggaggccaaggcaggtggatcacttgaggtcaggagttcaagatcagcctggccaacatgacgaaacctcg------tcactactaaaaatacaaaaattagccaggtatgctggtgcacgctgataatcccagctactcaggaggctgaggcaggagaattgcttgaactcaggaggcagaggttgcaatgagctgagatcatgccattgcactccagcctgggtgacagaatgagactctgtcgcaaaataa--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101104589 289 + 187378091 ttccgggcacagtggctcacacctgtaatcccagaacttcgggagaccaaggcaggtggatcacttgaggtcaggagttcaagatcagcctgaccaacatgacgaaacctcg------tcactactaaaaatacaaaaattagccaggtatgctggTGCGCGctgataatcccagctactcgggaggctgaggcaggagaattgcttgaactcaggaggcagaggttgcaatgagccgagatcatgccattgcactccagcctgggtgacagaatgagactctgtcgcaaaataa--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4970301 290 + 91754291 TTccgggaacggtggctcacacctgtaatcccagaactttgggaggccaaggcaggtggatcacttgaggtcaggagttcaagatcagcctggccaacatgacgaaacctcg------tcgctactaaaaatacaaaaattagccaggtatgctggtgcccgctgataatcccagctactcgggaggctgaggcaggagaattgcttgaactcaggaggcagaggttgcaacgagccgagatcatgccattgcactccagcctgggtgacagaatgagactctgtcgcaaaataa-a- i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24771075 47906 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=525432.000000 s hg38.chr3_KI270781v1_alt 87264 379 + 113034 ataaataaaataaaataaaataaaataaagtaaaaCAATggcctggcacggtgactcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaat----ac--aaaaaaaaaaaaaaaaaaaattagccaggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaat--tgcttgaacccgaggggaggaggttgcagtgagctgagattgtgccactgcactacagcct-ggtgacagagtgagactccgtatc--aaaaaaataaaataaaataataaaataaaattaaaataaaaaatta s panTro4.chr3 13836734 363 - 202329955 -----------aaaataaaataaaataaaataaaacaaTggcctggcacggtgactcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaat----ac-------aaaaaaaaaaaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaat--tgcttgaacccgaggggaggaggttgcggtgagctgagattgtgccactgcactacagcct-ggtgacagagtgagactccgtatc--aaaaaaataaaataaaataataaaacaaaaTTAAAATTAAAAATTA i panTro4.chr3 C 0 I 5 s ponAbe2.chr3 13823476 363 - 202140232 ataaaa-----taagtaaaataaaataaagtaaaataaTggcctggcacggtgactcacgcctgtaatcccagcactttgggaggccaaggctggcggatcacgaggtcaacagatcgagaccatcctggccaacatagtgaaaccccatctctactaaaaat----ac-------------aaaaaaaaattacctgggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatcacacttaaacccaaaggaaggaggttgcagtgagcagagattgtgccactgcactacagcct-ggtgac--agtgagactccgtatc--aaaaaagtaaaataaaataataaaattatattaaaattaaaaatta i ponAbe2.chr3 C 0 I 5 s nomLeu3.chr11 14371904 370 - 123690457 -----------atactaaaataaaataaagtaaaaTAATggcctggcacagtgactcacgcctgtaatcccagcacttcgggaggccaaggcgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaat----acaaaaaaaaaaaaaaaaaaaaaactagctgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaat--tgcttgaacccgaggggaggaggttgtagtgagccgagattgtgccactgcactacagcct-ggtgacagaatgagactccgtatc--aaaaaaataaaataaaataataaaattaaattaaaaattaaaatta i nomLeu3.chr11 C 0 I 5 s macFas5.chr2 103312599 342 - 192460366 -----------ataaataaat-aaataaaataaaaTTATggccagatgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacaaggtcaagagatcgagaccatcttggccaacatggtgaaaccccgcctctactaaaaat----ac------acacacacacacaaaattagctgagcatggtggcacgcgcctgtagtttcagctacttgggaggctgaggcaagagaat--tacttgaacccagggggagaaggttgcattgaaccgagatcacgccactgcactccagcctgggcaacagagcgagactctgtatt--aaaaaaa----------------------attaaaattaaaaatta i macFas5.chr2 C 0 I 5 s papAnu2.chr2 101104878 348 + 187378091 -----------ataaataaat-aaataaaataaaattatggccAGATGcaagggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtcaagagatcgagaccatcttggccaacatggtgaaaccccgcctctactaaaaatacacac------acacacacacacaaaattagctgagcatggtggcacgcgcctgtagtttcagctacttgggaggctgaggcaggagaat--tacttgaacccagggggagaaggttgcagtgaaccgagatcgcaccactgcactccagcctgggcaacagagcgagactctgtattaaaaaaaaa----------------------attaaaattaaaaatta i papAnu2.chr2 C 0 I 5 s chlSab2.chr15 4970591 342 + 91754291 ------------taaataaataaaataaaataaaATTATggccagatgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacaaggtcaagagatcgagaccatcttggccaacatggtgaaaccccgcctctactaaaaat----ac------acacacacacacaaaattagctgagcatggtggcacgcgcctgtagttccagctacttgggaggctgaggcaggagaat--tacttgaacccaggggcaggaggttgcagtgaaccaagattgcgacactgcactccagcctgggcaacagagcgagactctgtatt--aaaaaaa----------------------attaaaattaaaaatta i chlSab2.chr15 C 0 I 5 e rheMac3.chr2 103667938 303 + 192599291 I e canFam3.chr34 24771075 47906 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=944336.000000 s hg38.chr3_KI270781v1_alt 87643 397 + 113034 aaaacaaacaaaaCTAACTTTGTCACTTCACCCCTGAGGGAAAATTGGGAGAGGGTGGCATATGGCTTTTCTACAGTCCAGCAGCAGATTCTAGGCAAGGGGAGGAGCCAAGGCCCTTAGCAGAGGCCTGAGCCTGAGCAGACAGGGCACCAGCAAGGAGTCGCCAGCAGCAGGGCTGC-AGAGCACTCTCAAAAGCAGGACTGTCTAACGCTAAAATGGCTTGCCTTGG-GTGACC-AAAAAAATCCAACCTTATCAATAAAATCTTcactgcatttcagcctgggcaacagaggaagaccttatctcaaaaaattaaaaaaataaagtctgcttctaaaccagccgtgttgcatgagcgattctggaagaacacatagaaaaggctcctatctgggtt s panTro4.chr3 13837102 398 - 202329955 AAAACAAACAAAACTAACTTTGTCACTTCACCCCTGAGGGAAAATTGGGAGAGGGTGGCATATGGCATTTCTACAGTCCAGCAGCAGATTCTAGGCAAGGGGAGGAGCCAAGGCCCTTAGCAGAGGCCTGGGCCTGAGCAGACAGGGCACCAGCAAGGAGTCGCCAGCAGCAGGGCTGC-agagcactctcaaaagcaggactgtctaacactaaaatggcttgccttgg-gtggCCAAAAAAAATCCAACCTTTTCAATAAAATCTTcactgcatttcagcctgggcaacagaggaagactttatctcaaaaaattagaaaaataaagtctacttctaaaccagccgtgttgcatgagcgattctggaagaacacatagaaaaggctcatatctgggtt i panTro4.chr3 I 5 C 0 s ponAbe2.chr3 13823844 398 - 202140232 AAAACAAACAAAACTAACTTTGTCACTTCACCCCTGAGGGAAAATTGGGAGAGGGCAGCATATGGCTTTTCTACAGTCCAGCAGCAGATTCTAGGCAAGGAGAGGAGCCAAGGCCCTTAGCAGAGGCCTGAGCCTGAGGAGACAGGGCACCAGCAAGGAGTCGCCAGCAGCAGGGCTGC-AGAGCACTCTCAAAAGCAGGACTGCCTAATGCTAAAACGGCTTGCCTTGG-GTGACCAAAAAAAATCCAACCTTTTCAATAAAATCTTcactgcatttcagcctgggcaacagaggaagaccttatctcaaaaaattagaaaaataaagtctgcttctaaaccaaccgtgttgcctgagcgattctggaagaacacatagaaaaggctcatatctgggtt i ponAbe2.chr3 I 5 C 0 s nomLeu3.chr11 14372279 397 - 123690457 aaaaCAAACAAAACTAACTTTGTCACTTCACCCCTGAGGAAAAATTGGGAGAGGGTGGCATATGGCTTTTATACAGTCCAGCAGCAGATTCTAGGCAAGGAGAGGAGCCAAGGCCCTTAGCAGAGGCCTGAGCCTGAGGACACAGGGCACCAGCAAGGAGTCTCCAGCAGCAGGGCTGC-AGAGCACTCTCAAAAGCAGGACTGTCTAATGCTAAAATGGCTTGCCTTGG-GTGACC-AAAAAAATCCAACTTTTTCAATAAAATCTTcactgcacttcagcctgggcaacataggaagaccttatctcaaaaaattagaaaaataaagtctccttctaaaccaaccatgttgcatgagtgattctggaagaacacatagaaaaggctcatatctgggtt i nomLeu3.chr11 I 5 C 0 s rheMac3.chr2 103668241 399 + 192599291 aaaaCAAACAAAACTAACTTTGTCATTTCACCCCGGAGGGAAAATTGGGAGAGGGTGGCATATGGCTTTTATACAGTCCAGCAGCAGATTCTAGGCAAGGAGAGGAGCCAAAGCCCTTAGCAGAGGCCTGAGTCTGAGGAGACAGGGAACCAGCAAGGAGTCTCCAGCAGCAGGGCTGTGAGAGCACTCTCAAAAGCAGGACTGTCTAATGCTAAAATGGCTTGCCTTGGTGTGACC-AAAAAAATCCAACCTTTTCAATAAAATCTTcactgcacttcagcctgggcaatagagggagaccttgtctcaaaaaattagaaaaataaagtctgcttctaaaccaaccatattgcgtgagtgattctaggagaacacatagaaaaggctcatatttgggtt i rheMac3.chr2 I 303 C 0 s macFas5.chr2 103312946 399 - 192460366 aaaaCAAACAAAACTAACTTTGTCATTTCACCCCGGAGGGAAAATTGGGAGAGGGTGGCATATGGCTTTTATACAGTCCAGCAGCAGATTCTAGGCAAGGAGAGGAGCCAAAGCCCTTAGCAGAGGCCTGAGTCTGAGGAGACAGGGAACCAGCAAGGAGTCTCCAGCAGCAGGGCTGTGAGAGCACTCTCAAAAGCAGGACTGTCTAATGCTAAAATGGCTTGCCTTGGTGTGACC-AAAAAAATCCAACCTTTTCAATAAAATCTTcactgcacttcagcctgggcaatagagggagaccttgtctcaaaaaattagaaaaataaagtctgcttctaaaccaaccatgttgcgtgagtgattctaggagaacacatagaaaaggctcatatttgggtt i macFas5.chr2 I 5 C 0 s papAnu2.chr2 101105231 387 + 187378091 aaaacaaacaaaactaacttTGTCATTTCACCCCGGAGGGAAAATTGGGAGAGGGTGGCATATGGCTTTTATACAGTCCAGAAGCAGATTCTAGGCAAGGAGAGGAGCCAAAGCCCTTAGCAGAGGCCTGAGTCTGAGGAGACAGGGAACTAGCAAGGAGTCTCCAGCAGCAGGGCTGTGAGAGCACTCTCAAAAGCAGGACTGTCTAATGCTAAAATGGCTTGCCTTGGTGTGACC-aaaaaaaTCCAACCTTTTCAATAAAATCTTca------------ctgggcaatagagggagaccttgtctcaaaaaattagaaaaataaagtctgCTTCTAAACCAACCATGTTGCGTGAGTGATTCTAGGAGAACATATAGAAAAGGCTCATATTTGGGTT i papAnu2.chr2 I 5 C 0 s chlSab2.chr15 4970938 397 + 91754291 aaaaCAAACAAAACTAACTTTGTCATTTCACCCCGGAGGGAAAATTGGGAGAGGGTGACATATGGCTTTTATACAGTCCAGCAGCAGATTCTAGGCAAGGAGAGGAGCCAAAGCCCTTAGCAGAGGCCTTAGTCTGAGGAGACAGGGAACCAGCAAGGAGTCTCCAGCAGCAGGGCTGTGAGAGCACTCTCAAAAGCAGGACTGTCTAATGCTAAAATGGCTTGCCTTG--GTGACC-AAAAAAATCCAACCTTTTCAATAAAATCTTcactgcacttcaggctgggcaacagagggagaccttgtctcaaaaaattaggaaaataaaGTCTGCTTTTAAACCAACCATGTTGCGTGAGTGATTCTAGGAGAACACAGAGAAAAGGCTCATATTTGGGTT i chlSab2.chr15 I 5 C 0 e canFam3.chr34 24771075 47906 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1071073.000000 s hg38.chr3_KI270781v1_alt 88040 443 + 113034 ggtgggagcaaagggaaagaatcaccatg-----------------------------------------------------------------------------aaatgtgggaggtaaatgacctcagcagtgctgaagatgcaggaactc---atcagacggctcctgagaacatccaccccAGAGTTCATGGATATTTTCAGAAAGCCTCTGGGCTTCTCCCAGAATGAGGAGAG-AAAGTGTCCATAAACGATGATGGTAGCTGATGTATAAAA--TGAAATAGA-GCTACAGCAAACTACGT--------------------------------AGAAATATGCATCCCTTGGTGCAATTGGGAGGCAGGCCACCTCTTCCACTGG----CTTGAACCTGCTTGTGTGAGATGGAAAAGCACAA----------CGTTTAGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGGCCATCGATGTAGGGAAAGTGTCACAAAGTAAAATTCCCACTAGTGAAGCTGCTACAATTCCATGAAAGAGTCTGTGGTCAGAAATGCT s panTro4.chr3 13837500 444 - 202329955 ggtgggagcaaagggaaagaatcaccatg-----------------------------------------------------------------------------aaatgtggggggtaaatgacctcagcagtgctgaagatgcaggaactc---atcagacggctcctgagaacatccaccccggagttcatggacattttcagaaagcctctgggcttctcccagaatgaggAGAGAAAAGTGTCCATAAACGATGACGGTAGCTGTTGTATAAAA--TGAAATAGA-GCTACAGCAAACCACGT--------------------------------AGAAATATGCATCCCTTGGTGCAATTGGGAGGCAGGCCACCTCTTCCACTGG----CTTGAACCTGCTTGTGTGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGGCCATCGATGTAGGGAAAGTATCACAAAGTAAAATCCCCACTAGTGAAGCTGCTACAATTCCATGAAAGAGTCTGTGGTCAGAAATGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13824242 439 - 202140232 ggtgggagcaaagggaaaggatcaccatc-----------------------------------------------------------------------------aaatgtgggaggtaaatgacctcagcagtgctgaagatgcaggaactc---atcagacagctcctgagaacatccaccccagagttcatggacattttcagaaagcctctgggcttctcccagaacgagg-----aaAGTGTCCATAAATGATGATGGTAGCTGATGTATAAAA--TGAAATAGA-GCTACAGCAAACTACGT--------------------------------AGAAATATGCATCCCTTGGTGCAATTGGGAGGCAGGCCACCTCTTCCACTGG----CTTGAACCCGCTTGTGTGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGGCCATCGATGTAAGGAAAGTATCACAAAGTAAAATCACCACTAGTGAAGCTGCTACAATTCCACGAAAGAGTCTGTGGTCAGAAATGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14372676 437 - 123690457 ggtgggagcaaagggaaagaatcactgtg-----------------------------------------------------------------------------aactgtgggaggtaaatgacctcagcagtgctgaagatgcaggaactc---atcagagggctcctgagaacatccaccccAGAGTTCATGGACATTTTCAGAAAGCCTCTGGGCTTCTCCCAGAACGAGGAGAG-AAAGTGTCCATAAACGATGATGGCAGCTGATGTATAAAA--TGAAATAGA-GCTACAGCAAACTACGT--------------------------------AGAAATATGCATCCCTTGGTGCAATTGGG----AGGCCACCTCTTCCACTGG----CTTGAGCCTGCTTGCATGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGTCCATCGATGTAGGGAAAGTATCACAAAGTAAAATCCCCACTAGTGAAGCTGCTACAATTCCAC--AAAAGTCTGTGGTCAGAAATGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103668640 440 + 192599291 ggtgggagcagagggaaagaatcaccataa----------------------------------------------------------------------------aaatgtgacaggtaaatgacctcagcagtgctgaagatgcaggaactt---atcagagggctcctgagaacatccaccccggagttcgtggacattttcagagagcctctgggcttctcccagaacgaggagag-gaagtGTCCATAAACTATGATGGTAGCTGATGTATAAAA--TGAAATAGA-GCTATAGGAAACTAGGT--------------------------------AGAAATATGCATCCCTTGGTGCATTTGGG----AGGCCACTTCTTCCACTGG----CTTGAGCCTGCTTGCGTGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGAAGGAGATGCTGGCCATCGATGTAGGGAAAGTATCACAAAGTAAAATCCCCACTAGTGAAGCTGCTACAATTCCATGAAAGAGTCTGTGGTCAGAAATGCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103313345 440 - 192460366 ggtgggagcagagggaaagaatcaccataa----------------------------------------------------------------------------aaatgtgagaggtaaatgacgtcagcagtgctgaagatgcaggaactc---atcagagggctcctgagaacatccaccccggagttcgtggacattttcagagagcttctgggcttctcccagaacgaggagag-gaagtGTCCATAAACTATGATGGTAGCTGATGTATAAAA--TGAAATAGA-GCTATAGGAAACTAGGT--------------------------------AGAAATATGCATCCCTTGGTGCATTTGGG----AGGCCACTTCTTCCACTGG----CTTGAGCCTGCTTTTGTGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGGCCATCGATGTAGGAAAAGTATCACAAAGTAAAATCTCCACTAGTGAAGCTGCTACGATTCCACCAAAGAGTCTGTGGTCAGAAATGCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101105618 440 + 187378091 GGTGGGAGCAGAGGGAAAGAATCACCATAA----------------------------------------------------------------------------AAATGTGAGAGGTAAATGACCTCAGCAGTGCTGAAGATGCAGGAACTC---ATCAGAGGGCTCCTGAGAACATCCATCCTGGAGTTCGTGGACATTTTCAGAAAGCCTCTGGGCTTCTCCCAGAACGAGGAGAG-GAAGTGTCCATAAACTATGATGGTAGCTGatgtataaaa--tgaaataga-GCTATAGGAAACTACGT--------------------------------AGAAATATGCATCCCTTGGTGCATTTGGG----AGGCCACCTCTTCCACTGG----CTTGAGCCTGCTTGCGTGAGATGGAAAAGCACAA----------CGTTTGGAAGtctggagaaggaaagagaagggaggagatgCTGGCCATCGATGTAGGAAAAGTATCACAAAGTAAAATCTCCACTAGTGAAGCTGCTACGATTCCACGAAAGAGACTGTGGTCAGAAATGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4971335 516 + 91754291 GGTGGGAGCAGAGGGAAAGAATCACCATGAAATGTGGGAGGTagctttgcgcagtggcagtatcgtaaccaatgaggtttatccgaggcgcgattattgctaatcgaaaTGTGGGAGGTAAACGACCTCAGCAGTGCTGAAGATGCAGGAACTC---ATCAGAGGGCTCCTGAGAGCATCCACCCCGGAGTTCGTGGACATTTTCAGTGAGCCTCTGGGCTTCTCCTAGAATGAGGAGAG-GAAGTGTCCATAAATTATGATGGTGGCTGATGTATAAAA--TGAAATAGA-GCTACAGCAAACTACGT--------------------------------AGAAATATGCATCCCTTGGTGCATTTGGG----AGGCCACTTCTTCCACTGG----CTTGAGCCAGCTTGCGTGAGATGGAAAAGCACAA----------CGTTTGGAAGTCTGGAGAAGGAAAGAGAAGGGAGGAGATGCTGGCCATCGATGTAGGGAAAGTGTCACAAAGTAAAATCCTCACTAGCGAAGCTGCTACAATTCCATGAAAGAGTCTGTGGTCAGAAATGCT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 17270032 470 + 42124431 GGAGAGGAGAAGGGAAGAGACCTGCCAT------------------------------------------------------------------------------AATTGTGAGATACATGTGAAATCTGTACGCCTATAGATATCCAAACTCCAGGTGAGAGGCATGCTGACAACA------AAAAAGTCCCTTGGAATATTAGGGAGAGAACTGGACCTCCACAAGAATAGAG---G-ATGGTCTCTTGATTCAATTGTGTTAAATTTCGTCTAACGCTTGAATTATATGCTATAGAAAATTATATACTATATGAAATGTGAGTCGAGTAAGAGTTTAAGAAATATCTACTGCCGGGTACAATT-------AGGTCACATACATTAATGGGTCAGTTAGGCCTGCACGAGTTTGCTTACAAGATACAACCCACCTAGGCATTTTCGAATCTGGAAAAGGAGGAGGAAGGGAAGAGGT--------TCTATTCAGGAAAAGAACCTCACAGTAAAATCTCTACCAAGGCAGAGGTTGCGATTCAAGCACATATTTTGTGGTTGGAAATGTT i canFam3.chr34 n 47906 I 20 e calJac3.chr15 92439687 13539 - 98464013 T a score=508662.000000 s hg38.chr3_KI270781v1_alt 88483 211 + 113034 GTTAT----CAAACAAACAAAAATAAATAAATGAACGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCGTAGAAAGGTTTTCCAgctgggcgcggtggctcatgcctgtaatcccagcactttaggaggccgaggggggcggatcacaagatcaagagatcaagaccagcctggccaacatggtgaaaccccgtctccactaaaaatac s panTro4.chr3 13837944 211 - 202329955 GTTAT----CAAACAAACAAAAATAAATAAATGAACGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCGTAGAGAGGTTTTCCAgctgggcgcggtggctcacgcctgtaatcccagcactttaggaggccgaggggggcggatcacaagatcaagagatcaagaccagcctggccaacatggtgaaaccccgtctccactaaaaatac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13824681 211 - 202140232 GTTAC----CAAACAAACAAAAATAAATAAATGAATGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCGTAGAGAGATTTTCCagccgggcgcggtggctcacgcctataatcccagcactttgggaggccgaggggggcggatcacaagatcaagagatcaagaccagcctggccaacacggtgaaaccccgtctccactaaaaatac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373113 211 - 123690457 GTTAT----TGAACAAACAAAAATAAATAAATGAATGAAGTGCTGTTATTAGAGGTCAGAAAGCTTCATAATGCATAGAGAGGTTTCCTggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggggggtggatcacaagatcaagagatcaagaccagcctggccaaaatggtgaaaccccgtctccactaaaaatac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669080 211 + 192599291 GTTAT----CAAACAAACAAAAATAAATAAATAAATGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCGTAGAGAGGTTTTCAggccgggcgcggcggctcacgcctgtaatcccagcactttgggaggccgagtggggtggatcacaagatcaagagatcaagaccagcctggccaacatggtgaaaccccgtctccactaaaaatac i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103313785 199 - 192460366 GTTAT----CAAACAAACAAAAATAAATAAATAAATGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCATAGAGAGGTTTTCTGGCCGGG------------cgcctgtaatcccagcactttgggaggccgagtggggcggatcacaagatcaagagatcaagaccagcctggccaacatggtgaaaccccatctccactaaaaatac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106058 215 + 187378091 gttatcaaacaaacaaacaaaaataaataaataaatgaagtgctGTTATCAGAGATCAGAAAGCTTCATAATGCGTAGAGAggttttcaggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagtggggtggatcacaagatcaagagatcaagaccagcctggccaacatggtgaaaccccgtctccactaaaaatac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4971851 211 + 91754291 GTTAT----CAAACAAACAAAAATAAATAAATAAATGAAGTGCTGTTATCAGAGATCAGAAAGCTTCATAATGCATAGAGAGGTTTTCTggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagtggggcggatcacgagatcaagagatcaagaccagcctggccaacatggtgaaatcctgtctccactaaaaatac i chlSab2.chr15 C 0 C 0 e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=6825.000000 s hg38.chr3_KI270781v1_alt 88694 5 + 113034 aaaaa s panTro4.chr3 13838155 5 - 202329955 aaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13824892 5 - 202140232 aaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373324 5 - 123690457 aaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103313984 5 - 192460366 aaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106273 5 + 187378091 aaaaa i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4972062 0 + 91754291 C e rheMac3.chr2 103669291 0 + 192599291 C e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=72139.000000 s hg38.chr3_KI270781v1_alt 88699 136 + 113034 ttggttgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacatagtgaaaccccatctctactaaaaatacaaaaaatt s panTro4.chr3 13838160 136 - 202329955 ttgatcgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacatagtgaaaccccatctctactaaaaatacaaaaaatt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13824897 136 - 202140232 ttggccgggcgcggtggctcacgcctgtaatcccagcactttaggaggtcgaggcgggtggatcgtgaggtcaggagatcgagaccatcctggctaacatagggaaaccccatctctactaaaaatacaaacaatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373329 136 - 123690457 ttggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacacggtgaaatcccgtctctactaaaaatacaaaaaatt i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4972062 0 + 91754291 C e papAnu2.chr2 101106278 0 + 187378091 C e macFas5.chr2 103313989 0 - 192460366 C e rheMac3.chr2 103669291 0 + 192599291 C e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=93158.000000 s hg38.chr3_KI270781v1_alt 88835 162 + 113034 agccgggcgtggtggtgggcacctgtggtcccagctactaggaaggctgaggcaggagaatggcgtg-aacctgggaggcggaggttgcagtgagcctagattgcgccactgcactccagcctgggtgacagagcaagactccatctc-aaaaaaaaaaaaaaa s panTro4.chr3 13838296 164 - 202329955 agccgagcgtggtggtgggcacctgtagtcccagctactcggaaggctgaggcaggagaatggcgtgaaacctgggaggcggaggttgcagtgagcctagattgcaccactgcactccagcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13825033 163 - 202140232 agccgggtgtggtggtgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtggaacccaggaagcggagattgcagtgagcctagattgcaccactgcactccagcctgggcgacagagcaagactgcatctc-aaaaaaaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373465 160 - 123690457 agctgggcatggtggcgggcacctgtggtcccagctactcgggaggctgaggcaggagaatggcctggaacccgggaggcggaggttgcagtgagcctagattgcaccaccgcactccagcctgggcgacagagcgagactccatctc----aaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86217404 129 - 187378091 agctgggcgctgtggctcacacctgtaatcccagcactttgggagggtgaggcaggtggat--catg-aggtcaggagttcaaga-------------------------------ccaacctggccaacatggtgaaaccctgtctc-tattaaaaataagaa i papAnu2.chr2 n 0 C 0 e chlSab2.chr15 4972062 0 + 91754291 C e macFas5.chr2 103313989 0 - 192460366 C e rheMac3.chr2 103669291 0 + 192599291 C e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=3822.000000 s hg38.chr3_KI270781v1_alt 88997 2 + 113034 aa s panTro4.chr3 13838460 2 - 202329955 aa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13825196 2 - 202140232 aa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373625 2 - 123690457 aa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669291 2 + 192599291 aa i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 86217533 2 - 187378091 aa i papAnu2.chr2 C 0 n 0 s chlSab2.chr15 4972062 2 + 91754291 aa i chlSab2.chr15 C 0 C 0 e macFas5.chr2 103313989 0 - 192460366 C e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=4095.000000 s hg38.chr3_KI270781v1_alt 88999 3 + 113034 aaa s panTro4.chr3 13838462 3 - 202329955 aaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13825198 3 - 202140232 aaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373627 3 - 123690457 aaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669293 3 + 192599291 aaa i rheMac3.chr2 C 0 C 0 s chlSab2.chr15 4972064 3 + 91754291 aaa i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 86217535 0 - 187378091 I e macFas5.chr2 103313989 0 - 192460366 C e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=356395.000000 s hg38.chr3_KI270781v1_alt 89002 171 + 113034 ttagctcggcgtggtggcatgcacctatagttccagctacttgggaggctgagacaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatctcgccactgcactccagcctggcaacagagtgagactctgtctcagaaaaaaaaaaaaaaaaaaaaa s panTro4.chr3 13838465 166 - 202329955 atagctcggcatggtggcatgcacctatagtcccagctacttgggaggctgagacaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagatctcgccactgcactccagcctggcgacagagtgagactctgtctcag-----gaaaaaaaaaaaaaaG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13825201 166 - 202140232 ttagctcagggtggcggcacgcacctatagtcccagctacttgggaggctgagacaggagagtcacttgaacccgggaggcggaggttgcagtgagctgagatctcgccactgcactccagcctggtgacagaatgagactctgtctcag-----gaaaaaaaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14373630 166 - 123690457 ttagcttggcgtggtggtgtgcacctatagtcccagctacttggggggctgagacaagagagtcacttgaacccgggaggcagaggttgcagtgagctgagatctcgccactgtactgcagcctggtgacagagtaagactctgtctcag-----aaaaaaaaaaaaaaaG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669296 159 + 192599291 ttagctcagcgtggtggcacacgcctatagtcccagctactctggaggctgagacaggagaatcacttgaacctgggaggcggaggttgcagtgagccaagatcttgccactgcacttcagcctggcaacagagcaagactctgtct--g----------aaaaaaaaaaG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103313989 161 - 192460366 ttagctcagcgtggtggcacacgcctatagtcccagctactcgggaggctgagacaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatctcaccactgcacttcagcctggcaacagagcaagactctgtct--g--------aaaaaaaaaaaaG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106278 162 + 187378091 ttagctcagcgtggtggcgcatgcctatagtcccagctactcgggaggctgagacaggagaatcacttgaacctgggaggcggaggttgcagtaagccgagatctcgccgctgcacttcagcctggcaacagagcaagactctgtct--g-------aaaaaaaaaaagag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4972067 168 + 91754291 ttagctcggcatggtggcgcatgcctatagtcccagctactcaggaggctgagacaggagaatcactttaacctgggaggcggaggttgcagtgagccgagatcttgtccctgcacttcagcctggcaacagagcaagactctgtct--g-gaaaaaaaaaaaaaaaaaaG i chlSab2.chr15 C 0 C 0 e canFam3.chr34 17270502 20 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=178044.000000 s hg38.chr3_KI270781v1_alt 89173 76 + 113034 aGAGAGAGATGTTTTCCAGGATGGTAGACAAGGTGATCTGTAATTTGAAGATAGCTCTGAATATCACCTAAATAAG s panTro4.chr3 13838631 76 - 202329955 AGAGAGAGAGGTTTTCCAAGATGGTAGACAAGGTGATCTGTAATTTGAAGATAGCTCTGAATATCACCTAAATAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13825367 69 - 202140232 aGAG------GTTTTCCAAGATGGTGGACAA-GTGATCTGTAATTTGAAGATAGCCCTGAATATCACCTAAATAAG i ponAbe2.chr3 C 0 I 11466 s nomLeu3.chr11 14373796 62 - 123690457 AGAGAGAG--TTTTTCCAAG------------GTGATCTGTAATTTGAAGATAGCCCTGAATATCACCTAAATAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669455 76 + 192599291 AGAGAGAGAGGCTTTCCAAGATGGTAGACAAGGTGAGCTGTAATTTGAAGATAGCCCTGAATATCACCTAAAAAAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103314150 76 - 192460366 AGAGAGAGAGGCTTTCCAAGATGGTAGACAAGGTGAGCTGTAATTTGAAGATAGCCCTGAATATCACCTAAAAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106440 76 + 187378091 agagagagaggctttcCAAGATGGTAGACAAGGTGAGCTGTAATTTGAAGTTAGCCCTGAGTATCACCTAAAAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4972235 76 + 91754291 AGAGAGAGAGTCTTTCCAAGATGTTAGACAAGGTGAGCTGTAATTTGAAGATAGCCCTGAATATCACCTAAAAAAG i chlSab2.chr15 C 0 C 0 s canFam3.chr34 17270522 76 + 42124431 AAACATAGGAGGTTTCCAGGTTGGCAGACAAGGCAGGCTGGAGTTTGAAAACCTCTCCGAATGCCACCTAAAGAAG i canFam3.chr34 I 20 C 0 e calJac3.chr15 92439687 13539 - 98464013 T a score=725723.000000 s hg38.chr3_KI270781v1_alt 89249 352 + 113034 TAATGTTCCTGAGCAGGAAAAACAGGCCCTTCAAGCTGGGTAGCAAGCAG-----GTAAGAGAAGGGGAATGTGGAAAGGAACG-GGGAGCAGGCAGAGG--CCTGGTGTACCCATCCTGGAGAGGCAGGCTCCAGATGCTGGAGGGCAAAAGATGCCTCGTTCTCCTCTAGCAGCGTC-GCAGCTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGCCCAGCC----CCTCTCCTTCTGACATGTCCC-CCAGGTGGCTCTGGAGGTCTAAATCAGACAAGCTTTCAGGA-----------ACCCTATTGGCAAACACATCCCTGCACCTGCTGACCAAAGACCAAAA s panTro4.chr3 13838707 356 - 202329955 CAATGTTCCTGAGCAGGAAAAACAGGCCCTTCAAGCTGGGTAGCAAGCAGGTAA-GTAAGAGAAGGGGAGTGTGGAAAGGAACG-GGGAGCAGGCAGAGG--CCTGGTGGACCCATCCTGGAGAGGCAGGCTCCAGATGTTGGAGGGCAAAAGATGCCTCGTTCTCCTCTAGCAGCGTC-ACAGCTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGCCCAGCC----CCTCTCCTTCTGACATGTCCC-CCAGGTGGCTCTGGAGGTCTATATCAGACAAGCTTTCGGGA-----------ACCCTGTTGGCAAACACATCCCTGTACCTGCTGACCAAAGATCAAAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14373858 356 - 123690457 CAATGTTCCCGAGCAGGAAAAACAGGCCCTGCAAGCTGGGTAGCAAGCAGTTAA-GTAAGAGAAGGGGAGTGTGGAAAGGAATG-GGGAGCGGGCAGAGG--CCTGGTGGACCCATCCTGGAAAGGCAGGCTCCAGATGTTGGAGGGCAAAAGATGCCTCGTTCTCCTCTAGCAGCATC-GCAGCTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGCCCAGCC----CCTCTCCTTCTGACATGTCCC-CCAGGTGGCTCTGGAGGTCTAAATCAGACAAGCTTTCAGGA-----------ACCCTGTTGGCAAACACATCCCTGCACCTGCTGACCAAAGACCAAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669531 356 + 192599291 CAATGTTCCTGAGCAGGAAAAACAGGCCCTGCAAGCTGGGTAGCAAGCAGTTAA-GTAAGAAGAGGGGAGTGTGGAAAGGAATG-GGCAGCTGGCGGAGG--CCTGGTGGACCCATCCTGGAGAGGCAGGCTCCAGACGCTGGAGGGCAAAAGATGTCTCGTTCTCTTCCAGCAGCGTC-GCAACTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGTCCAACG----CCTCTCCTTCTGACATGTCCC-CCAAGTGGCTCTGGAGGTCTAAATCAGACAAGCTTTCAGCA-----------ACCCTGTTGGCAAACCCATCCCTGCACCTGCTGACCAAAGACCAAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103314226 352 - 192460366 CAATGTTCCTGAGCAGGAAAAACAGGCCCTGCAAGCTGGGTAGCAAGCGGT-----TAAGAAGAGGGGAGTGTGGAAAGGAATG-GGCAGCTGGCGGAGG--CCTGGTGGACCCATCCTGGAGAGGCAGGCTCCAGACGCTGGAGGGCAAAAGATGTCTCGTTCTCTTCCAGCAGCGTC-GCAACTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGTCCAACC----CCTCTCCTTCTGACATGTCTC-CCAAGTGGCTCTGGAGGTCTAAATCAGACAAGCTTTCAGCA-----------ACCCTGTTGGCAAACCCATCCCTGCACCTGCTGACCAAAGACCAAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106516 356 + 187378091 CAATGTTCCTGAGCAGGAAAAACAGGTCCTGCAAGCTGGGTAGCAAGCAGTTAA-GTAAGAAGAGGGGAGTGTGGAAAGGAATG-GGCAGCTGGCAGAGG--CCTGGTGGACCCATCCTGGAGAGGCAGGCTCCAGACGCTGGAGGGCAAAAGATGTCTCGTTCTCTTCCAGCAGCGTC-GGAACTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGCAGGG-GTCCATCTGGGGACAGGCCCAACC----CCTCTCCTTCTGACATGTCGC-CCAGGTGGCTCTGGAGGTCTAAATCAGACAAGCTTTCAGCA-----------ACCCTGTTGGCAAACCCATCCCTGCACCTGCTGACCAAAGACCAAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4972311 356 + 91754291 CAATGTTCCTGAGCAGGAAAAACAGGCCCTGCAAGCTGGATAGCAAGCAGTTAA-GTAAGAAGAGGGGAGTGTGGAAAGGAATG-GGCAGCTGGCAGAGG--CCTGGTGGACCCATCCTGGAGAGGCAGGCTCCAGACGCTGGAGGGCAAAAGATGTCTCGCTCTCTTCCAGCAATGTC-GCCACTGGATCCAGACCAGTTCCAGTTTGTCCTCCCAGAAGAGTAGGG-GTCCATCTAGGGACAGGCCCAACC----CCTCTCCTTCTGACATGTCCC-CCAAGTGGCTCTGAAGGTCTAAATCAGACAAGCTTTCAGCA-----------ACCCTGTTGGCAAACCCATCCCTGCACCTGCTGACCAAAGACCAAAA i chlSab2.chr15 C 0 C 0 s canFam3.chr34 17270598 372 + 42124431 CTCCATGCCAGAAAACTGAAACCGGCTCCTGGAAACTCTGAGGAAAGAGGCTAGTGTGAG---AGGGGAGCAAAGAAAAGATGGTGGTGGTGGGGGGAGGTACCAGGTGGACTCCTCCTGGCAGGGCAGACTCCAGATGTTGGAGGATGAAAAATACCTCATTCTCCCCCAGCAGCTCCAGCAACTGGAACCAGACCAGTGCCAGCTTGTCCTCCCAGGGGAGTGGGGAGCCCACCTGGGGG-AGGCCCCACCACCACCTTTCCTTCTGGCCGCCCACACCAGGT--CCCGGAAGGTCTAGACCAGAGTTACTCCCAACACTCGTCCCCCTCTCCCGTTGATACAGACATTACTGCACCTGCTGGCTGATGCCTGAAA i canFam3.chr34 C 0 I 102 e ponAbe2.chr3 13825436 11466 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T a score=421826.000000 s hg38.chr3_KI270781v1_alt 89601 235 + 113034 GGTGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGTCTTCTGGAAAGGCAGATTTACACAGGTCTATCCTGTTGACC----ATCGATGGCCCTGTGGGCAAAGAGTGGT-GCATAGAGAGGAATCTTTTTTCCACACATCTATGCTTTCAACCAGCTCAGCAGGAATGTGCCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT s panTro4.chr3 13839063 235 - 202329955 GGTGAACA------------------------------------TACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGCCTTCTGGAAAGGCAGATTTACACAGGTCTATCCTGTTGACC----ATCGATGGCCCTGTGGGCAAAGAGTGGC-GCACAGAGAGGAATCTTTTTTCCACACATCTATGCTTTCAACCAGCTCAGCAGGAATGTGCCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14374214 234 - 123690457 GGTGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGCCTTCTGGAAAGGCAGATTTACACAGGTCTATCCTGTTGACC----GGCAATGGCCCTATGGGCAAAGAGTGGC-ACATGGAGAGGAATC-TTTTTCCACACATCTATGCTTTCAACAAGCTCAGCAGGAATGCGCCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103669887 222 + 192599291 GATGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGCCTTCCGGAAAGGCAGATTTACACAGGCCCATCCTGTTCACC----GTCGATGGCCCTATGG-------------GCAAAGAGTGGAATC-TTTCTCCACACATCTATTCTTTCAACCAGCTCAGCAGGAATGCACCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103314578 222 - 192460366 GATGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGCCTTCCGGAAAGGCAGATTTACACAGGCCCATCCTGTTCACC----GTCGATGGCCCTATGG-------------GCAAAGAGTGGAATC-TTTCTCCACACATCTATTCTTTCAACCAGCTCAGCAGGAATGTACCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101106872 222 + 187378091 GATGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGGGT---------------------------------TTCCCAGCCAGCCTTCCGGAAAGGCAGATTTACACAGGTCTATCCTGTTCACC----GTTGATGGCCCTATGG-------------GCAAAGAGTGGAATC-TTTTTCCACACATCTATTCTTTCAACCAGCTCAGCAGGAATGCACCCACACAGACATGTGACTCACACCAGCAG-GTTTCTCATGTATTTTTGAGACTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4972667 235 + 91754291 GATGAACA------------------------------------GACAGGGCAAGAG-----GGAGAGACAGCACATGAGT---------------------------------TTCCCAGCCAGCCTTCTGGAAAGGCAGATTTACACAGGTCTATCCCGTTGACC----GTTGATGGCCCTATGGGCAAAGAGTGGCTGCAAAGAGTGGAATC-TTTTTCCACACATCTATTCTTTCAACCAGCTCAGCAGGAATGCACCCACACAGACATGTGACTCACACCAGAAG-GTTTCTCATGTATTTTTGAGACTT i chlSab2.chr15 C 0 C 0 s canFam3.chr34 17271072 311 + 42124431 AGTCAACAAATATGAGTGATTATGGTCAGATCCTGTTCCTTTTGGACAAGGAGAGAGTATATAAAAAGGTAGAGGATGGGTGACCAAAGGGCGAGGAGGGAGGAGAATGGGGACCTGCCAGGCAGCCTCCCAGGCAGGGACGCTGAC---GGGCCGAGCTATTTACCTTTAGCTGCTAGCTCTGTGGAGGAACAGTTGC-TGTGTGAGGGGAGTTTCTGCTCTGCACATCTGTGCACCCTCCCGGCTTTGCGGGAACTTCGCCACTCAGACATATGATTCACATCAACTGTGTTTTTCATGAGTTTTAGAGGCTT i canFam3.chr34 I 102 n 102 e ponAbe2.chr3 13825436 11466 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T a score=4494227.000000 s hg38.chr3_KI270781v1_alt 89836 2587 + 113034 AAAATAATGCTAACTTCAgaccaggcgtggtggctcgcgcttttaatcccagcactttgagaggccgaggtgggtggatcgtctgacgtccggagtttgaaaccagcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcacaggcctgtaatcacaactacccaggaagcaaaggcttgaaccaggaggtggaggttgcagtgagccaagatcgcgccactgcactccagcctgggtgacagagtgagactgcatctc-aaaaaaaataaataaataaaaataaaTGCTAACTTCAATAGAAAAGAACTTCATTCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTTTCATGGAGGAAAAA--------------AATAATATTT-----------ATTCATTTTTTTCTGATCATGAAAGCAATGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTAACTATAACACTAAAggacgggcgcagtggctcatgcctgtaatcccagctctttgggaggccaaggtggatggatcacttgaggccaggagttcgagaccagcctggccaacatgatgaagcaccgtctctaccaaaaatacaaaaattagctgggcgtggtggtgggtgcctgtggttctagttacttgggaggctgaggcacgagaattgcttgaacgtgggaggtggaagttgcagtgagccaagatcgtgtcactgcactctagcctgggcaacagagtgagaccctgtctcaaaataaataaataagaagaaCACTGAAATTGCTCACAAGCTGGCTattccttcattcaaatgtgt-agagagctccttctcactggcaggtctactctgggctatggcggtgaactctactctggtgaacacaaccagaaaggcctttgttcctgtgctgctgacatgccagtgggggaagcagacaagaggcgattccatgggcataaagtatgtcaggtcgtcacaacgccatgaagaagaatacacagggcaagagggacagacacactacttgagctgggcgttccctatttggagggtcaggtgagattccagaaagaagCAGAGTTAAATTTTGGATGTTTTTCCTTCCAAGCTTTCAATTAAATATTAACGTTCTTATTATCAGTCACAAATTTTTAGATGAAACTTC-TTTAAAAAAAAAGTCTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacatacctgtagttccag-ctactcgggaggctgaggtgggaggatcgcttgagcctgggaggttgaggctgcaatgagctatgggcaccactgcactagacaacaaaagcaagactctgtctc--------aaaaaaaaaaa---------------------aaaaagaaaaataaagaaaagtaatacttgttcattgtagaagacctggaagtggtagaaaatctggaagggaaagggagagagaagataaatctcccacaatggcaccagcataggataatccctccagatgtgttggtacatctccctccTCGTACCTTTCTCGATTGCTAAACTCACACGGTATTTACACGACTGAATCCTGCTTTTCTTAACCCCTATCATAAGCATTACCCCATGTTTGTCAGAGTTTTGAAAGACAAAGTACAAGAGGCCACTGTTTCCCTTCCGCGTGGGAAAAGGCCTTCACAGAAGCCCAGGCACCATGCTCCCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGACCCTGGGCCTTCATTCAACCTGTCATTGAGAGAGCTTCAGACAAGTGATAAGTCCCAGATCCCCAGAAGTGAAACCCCAGGCAGAGGGACCACTTTGTGTCAGACCCAAAGGGAGATGAGGTTG-CAGCAGAGCCAATGGAGTATTTGTTTCAGAAGTAGAGGCGAGGGAGGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGAAATAGGTAGCAGGAATGCATGTTTCGAGAGTCAGAGTTGACAGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTTCCCCCTCAAACTCCTACAGCAGAGATGCC-ATTGTCTCCGGGAGCCTGCAAGGGCCCTGCTTCCTGTCTCCGGAAGCAAAAGCAAACTGGTGTCCTTTCCACCCTCACCTGCAGCCTCTCTGCCCTCAGCCATTTCCCCC-TGGGTCTGGGCCTCCTCCTTTTTGCTTCCTATCCTTATTGGAGCATCATTCTGGACCTATAACCACGTACACTCACTCCCAACCCTACCAATCAGGTCATTAGAGA-----G-tttgttttattttattttatt------ttttgagatggagtttcactctcgttgcccaggctggagagcaatggtgcgatctcaactcactgcaacctctgcctcccgggttcaagcaattctcttgcctcagcctcctgagtagctgggattacaggcacacaccactatgcttggctaatttttgtatttttagtagagac-agggtttcaccatattggtcaggctggtctcgaacccctgacctcagatgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagcca s panTro4.chr3 13839298 2590 - 202329955 AAAATAATGCTAACTTCAgaccaggcgtagtggctcgcgcttttaatcccagcactttgagaggccgaggtgggtggatcgtctgacgtccggagtttgagaccagcctggccaacatggtgaaactccgtctctactaaaaatacaaaaattagctgggcgtggtggcacaggcctgtaatcacaactacccaggaagcaaaggcttgaaccaggaggtggaggttgcagtgagccaagatcgcgccactgcactccagcctgggtgaccgagtgagactgcatctc--aaaaaaataaataaataaaaataaaTGCTAACTTCAGTAGAAAAGAACTTCATTCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTTTCATGGAGGAAAAA--------------AATAATATTT-----------ATTCATTTTTTTCTGATCATGAAAGCAATGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTAACAATAACACTAAAggacgggcgcagtggctcatgcctgtaatcccagctctttgggaggccaaggtggatggatcacttgaggccaggagttcgagaccagcctggccaacatggtgaagcaccgtctctaccaaaaatacaaaaattagctgggcgtggtggtgggtgcctgtggttctagttacttgggaggctgaggcacgagaattgcttgaacgtgggaggtggaagttgcagtgagccaagatcgtgtcactgcactctagcctgggcaacagagtgagaccctgtctcaaaataaataaataagaagaaCACTGAAATTGCTCACAAGCTGGCTattccttcattcaaatgtgt-acagagctccttctcactggcaggtctactctgggctatggcggtgaactctactctggtgaacacaaccagaagggcctttgttcctgtaccgctgacatgccagtgggggaagcagacaagaggcgatgccatgggcataaagtatgtcaggtcgtcacaacgccatgaagaagaatacacagggcaagagggacagatacactacttgagctgggcgttccctatttggagggtcaggtgagattccagaaagaagcagagtgaaatttTGGATGTTTTTCCTTCCAAGCTTTCAATTAAATATTAACGTTCTTATTATCAGTCACAAATTTTTAGATGAAACTTCTTTTAAAAAAAAAGTCTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacatacctgtagttccag-ctactcgggaggctgaggtgggaggatcgcttgagcctgggaggttgaggctgcaatgagctatgggcaccactgcactagacaacaaaagcaagactctgtctc--------aaaaaaaaaaaaag------------------aaaaagaaaaagaaaGaaaagtaatacttgttcattgtagaagacctggaagtggtagaaaatctggaagggaaagggagagagaagataaatctcccacaatggcaccagcataggataatccctccagatgtgttggtacatctccctccTCGTACCTTTCTCAATTGCTAAACTCACACGGTGTTTACACGACTGAATCCTGCTTTTCTTAACCCCTATCATAAGCATTACCCCATGTTTGTCAGAGTTTTGAAAGACAAAGTACAAGAGGCCACTGTTTCCCTTCTGCGTGGGAAAAGGCCTTCACAGAAGCCCAGGCACCATGCTCCCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGACCCTGGGCCTTCATTCAACCTGTCATTGAGAGAGCTTCAGACAAGTGATAAGTCCCAGATCCCCAGAAGTGAAACCCCAGGCAGAGGGACCACTTTGTGTCAGACCCAAAGGGAGCTGAGTTTG-CAGCAGAGCCAATGGAGTATTTGTTTCAGAAGTAGAGGCGAGGGACGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGAAATAGGTAGCAGGAATGCATGTTTCGAGAGTCAGAGTTGACAGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTT-CCCCTCAAACTCCTGCAGCAGAGATGCCAATTGTCTCCGGGAGCCTGCAAGGGCCCTGCTTCCTGTCTCCGGAAGCAAATGCAAACTGGTGTCCTTTCCACCCTCACCTGCAGCCTCTCTGCCCTCAGCCATTTCCCCC--GGGTCTGGGCCTCCTCCTTTTTGCTTCCTATGCTTATTGGAGCATCATTCTGGACCTATAACCACGTACACTCACTCTCAACCCTACCAATCAGGTCATTAGAGA-----Gttttgttttattttattttatt------ttttgagatggagtttcactctcgttgcccaggctggagtgcaatggtgcgatctcaactcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccacgcttggctaatttttgtatttttagtagagac-agggtttcaccatattggtcaggctggtctcgaacccctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattacaggcatgagcca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14374448 2574 - 123690457 AAGATAATGCTAACTTCAgactaggcgtggtggctcgcgcttttaatcccagcactttgagaggccaaggtgggtggatcgtctgaggtcaggagttcgagaccagcctgtccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggagtggtggcacaggcctgtaatcacaactactcaggaagcaaaggcttgaaccaggaggcggaggttgcagtgagccaagatcacaccactgcactccagcctgggtgac--agtgagactgcatctc--aaaaaaataaataaataaaaataaaTGCTAACTTCAATAGAAAAGAACTTCATCCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGTTATTTTCATGGAGGAAAAA--------------AATAATATTT-----------ATTCATTTTTTTCTGATCATGAAAGCAATGCAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTAACAATAACACTAAAAgccaggcacagtggcccactcctgcaatcccagcactttgggaggccaaggtggatggatcacttgaggccaggagtttgagaccagcctggccaacatggtgaagcatcgtctctaccaaaaatacaaaaattagctgggcatggtggtgggtgcctgtggttctagttacttgggaggctgaggcacgagaattgcttgaatgtgggaggtggaagttgcagtgag-caagatcgtgtcactgcactctagcctgggcaacagagtgagatcctgcctcaaaataaataaataagaagaaCATTGAAATTGCTCGCAAGCTGGCTattccttcattcaaatgtgt-acagagccccttctcactgccaggtccgctctgggctatggc---------------ggtgaacacaacc------gctcttgttcctgcgccgctgacgtgccagtgggggaagcagacaagaggcgattccatgggcataaagtatgtcaggtcgtcacaatgccatgaagaagaatacacagagcaagacagacagacagactacttgagctaggtgttccctatctggagggtcaggtgacattccagaaagaagCAGAGTGAACTTTTGGATGTTTTTCCTTCCAAGCTTTCAACTAAATATTAATGTTCTTATTATCAGTTACAAGTTCTTAGATGAAACTTCTTTTAAAAAAAATGTTTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacatacctgtagttccag-ctactcgggaggctgaggtgggaggatcgcttgagcctgggaggttgaggctgcaatgagctatgggcaccactgcactagacaacaaaggcaagattctgtctc--------aaaaaaaaataaaa-------aaagaaaaactaaaaaGAAAAATAAAGaaaagtaatacttgctcattgtagaagacctggaagtggtagaaaatctggaaaggaaaagaagagagaagataagtctcccacaatggcaccagcataggataatccctccagatgtgttggtacatctccctcctggcacctttctCAATTGCTAAACTCACACAGTATTTACACGACTGAATCCTGCTTTTCTTAACCCCTATCATAAACATTA-CCCATATTTGTCAGAGTTTTGAAAGACAAAGTACAAGAGGCCACTGTTTCCCTTCTGCGTGGGAAAAGGGCTTCACAGAAGCCCAGGCACCATGCTCCCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGACCCTGGGCCTTCATTCAACCTGTCATTGAGAGAGCTTCAGACAAGTGATAAGTCCCAGATCCCCAGAAGTCAAACCCCAGGCAGAGGGACCACTTTGTGTCAGACCCGAAGGGAGCTGAGGTTGCCAGCAGAGCCAATAGAGTATTTGTTTCAGAAGTAGAGGTGAGGGAGGGTACATACCCTCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGAAATAGGTAGCAGGAATGCATGTTTCGAGAGTCAGAGTTGACAGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTT-CCCCTCAAACTCCTATAGCAGAGATGCC-ATTGTCTCAGGGAGCCTGCAAGGGCCCTGCTTCCTGTCTCCGGAAGCAAATGCAAACTGGTGTCCTTTCCACCCTCACCTGCAGCATCTCTGCCCTCAGACATTTCCCCCCTGGGTCTGGG---CCTCCTTTTTGCTTCCTATCCTTATTGGAGCATCATTCTGGACCTATAACCACATACGCTCACTCTCAACCCTACCAATCAGGTCATTAGAGA-----Gttttattttattttattttatt------ttttgagatggagtttcacccttgttgcccaggctggagtgcaatggcatgatctcaa-tcattgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccacgcttggctaatttttgtatttttagtagagac-agggtttcaccatattggtcaggctcgtctcgaacccctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcatgagcca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103670109 2593 + 192599291 AAAATGATGCTAGCTTCAggccaggcacagtggctcac-cctgtaatcccagcactttgggaggcctaggcgggtggatagtctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaacaattagctgggcgtggtggcacatacctgtaatcccaactactcaggaagttaaggcttgaatcaggaggcagaggttacagtgaaccaagatcatgccactgcactccagcctgggtgacagagtgagactgcatctcaaaaaaaaataaataaataaaaataaaGGCTAACTTCAGTAGAAAAGAACTTCATTCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTTTCATGGAGaaaaa---------------aataatattt-----------attt-tttttttCTGATCATGAGAGCAGTGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTATCAATAACA-TAAAggttgggcgcagtggctcatgcctgtaatcccagcactttgggagaccaaggtgaatggatcacttgaggccaggagttcgagaccagcctggccaacatagtgaagcaccatctctaccaaaaataaaaaaattagccgggcatggtggtgggtgcctgtagttctagttacttgggaggctgaggcacaagaattgcctgaacctgggaggtagaagttgcagtgagccaagatcgcatcactgcactctagcctgggcaacagagtgagatcctgtctcaaaaCACATACATAAGAAGAACACTGAAATTGCTCACGAGCTGGCTattccttcattcaaatgtgtgacggagctccttctcactgccaggtctgctctgggctatgga---------------ggtgaacacaaccagaagggcccttgttcctgtgccgctgacctgccagtgggggaagcagacaagaggcgattccatgggcgtgaagtatgtcgggtcgtcacaacgccatgaagaagaataaacagggcaagagggacagacagactac-tgagctgggcgttccctgtttggagggtcagggaaaattccagaaagaagCAGAGTGAA-TTTTGGATGTTTTTCCTTCCAAGCTTTCATCTAAATATTAACGTTCTTATTATCATTTACAAGTTTTTAGATGAAACTTCTTTAAAAAAAAAAGTTTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacatgcctgtagtcccag-ctactcgggaggctgaggtgggaggatcgcttgagcctgggaggttaaggctacaatgagctatgggcaccactgcaatagacaacaaaagcaagattctgtctc--------aaaaaaaaaaaaaaaaggaaaaaagaaaaaTTGAAAAGAAAAAT-AAAaaaagtcatacttgttcattgtaggagacctggaagtggtagaaaatctggaagggaaagggagagagaagataaatct-ccacaatggtaccagcataggatgatccctccagatgtattgattcatctccctcctgctacctttctCAATTGCTAAACTCACACGGTATTTACATGACTGAATCCTGCTTTTCTTAACCCCTATCATAAACATGACCCCATGTTTGTCAGAGCTTTGAAAGACAAAGTGCAAGAGGCCACTGTTTCCCTTCTACATTGGAAAAGGCGGTCACAGAAGCGCAGGCGCCATGCTCTCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGATCCTGGGCCTCCATTCAACCTGTCATTGAGAGAACTTCAGCCAAGTGATGAGTCCCAGATCTCCAGAAGTCAAACTCCAGGTAGAGGGATCACTTTGTGTCAGACCCAAAGGGAGCTGAGGTTGCCCGCAGAGCCAATGGAGTATTTGTTTCAGAGGTAGAGGCAAGGGAGGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGACATAGATAGCAGGAATGCATGTTTTGAGAGTCGGAGTTGATGGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTTCCCCCTCAAACTGCTACAGCAGAGATGCC-ATTGTCTCAGGGAGCCTGCAAGGGCCCAGCTTCCTGTCTCAGGAAGCAAATGCAAACTGGTGTCCTTCCCACCCTCACCTGCAGCATCTCCGCCCTCAGCCATTTCCCCC-TGGGCCTGGGCCTCCTCCTTTTTGCTTCCTAGCCTTATTGGAGCATCATTCTGGACCTATAACCACACACACCCACTCCCAACCCCACCAATCAGGTCATTAGAGA-----Gttttattttattttattttatttatttattgtgagatggggttttgttcttgtcgccaagactggagtgcagtggcgcaatctcagctcactgcaacctccacctcccaggctcaagcaattctcctgcctcagcctcccaagtagttgggcttacaggcacctgccaccacacctggctaatatttgtatttttaatagagtt-ggggcttcacc-tatctgtcaggctggtcttgaattcctgacctcaggtgatccactcgccttggcctcccaaactgct--ccctacaagcgtgagcca i rheMac3.chr2 C 0 I 9 s macFas5.chr2 103314800 2598 - 192460366 AAAATGATGCTAGCTTCAggccaggcacagtggctcac-cctgtaatcccagcactttgggaggcctaggcaggtggatcatctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaacaattagctgggcgtggtggcacatacctgtaatcccaactactcaggaagttaaggcttgaatcaggaggcagaggttacagtgaaccaagatcatgccactgcactccagcctgggtgacagagtgagactgcatctc--aaaaaaataaataaataaaaataaaTGCTAACTTCAGTAGAAAAGAACTTCATTCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTTTCATGGAGAAAAA---------------AATAATATTT------------TTT-TTTTTTTCTGATCATGAGAGCAGTGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTATCAATAACA-TAAAggttgggcgcagtggctcatgcctgtaatcccagcactttgggagaccaaggtgaatggatcacttgaggccaggagttcgagaccagcctggccaacatagtgaagcaccatctctaccaaaaataaaaaaattagccgggcatggtggtgggtgcctgtagttctagttacttgggaggctgaggcacaagaattgcctgaacctgggaggtagaagttgcagtgagccaagatctcatcactgcactctagcctgggcaacagagtgagatcctgtctcaaaaCACATACATAAGAAGAACACTGAAATTGCTCACGAGCTGGCTattccttcattcaaatgtgtgatggagctccttctcactgccaggtctgctctgggctatgga---------------ggtgaacacaaccagaagggcccttgttcctgtgccgctgaccagccagtgggggaagcagacaagaggcgattccataggcatgaagtatgtcgggtcgtcacaacgccatgaagaagaataaacagggcaagagggacagacagactac-tgagctgggcgttccctgtttggagggtcagggaaaattccagaaagaagCAGAGTGAACTTTTGGATGTTTTTCCTTCCAAGCTTTCATCTAAATATTAACGTTCTTATTATCATTTACAAGTTTTTAGATGAAACTTCTTTAAAAAAAAAAGTTTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacatgcctatagtcccag-ctactcgggaggctgaggtgggaggatcgcttgagcctgggaggttaaggctacaatgagctatgggcaccactgcaatagacaacaaaagcaagattctgtctcaaaaaaaaaaaaaaaaaaaaaaaaggaaaaAAGAAAAATTGAAAAGAAAAAT---AAAAAGTCATACTTGTTCATTGTAGGAGACCTGGAAGTGGTAGAAAATCTGGAAGGGAAAGGGAGAGAGAAGATAAATCT-CCACAATGGTACCAGCATAGGATGATCCCTCCAGATGTATTGATTCATCTCCCTCCTGCTACCTTTCTCAATTGCTAAACTCACACGGTATTTACATGACTGAATCCTGCTTTTCTTAACCCCTATCATAAACATGACCCCATGTTTGTCAGAGCTTTGAAAGACAAAGTGCAAGAGGCCACTGTTTCCCTTCTACGTTGGAAAAGGCCGTCACAGAAGCGCAGGCGCCATGCTCTCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGATCCTGGGCCTCCATTCAACCTGTCATTGAGAGAACTTCAGCCAAGTGATGAGTCCCAGATCTCCAGAAGTCAAACCCCAGGTAGAGGGATCACTTTGTGTCAGACCCAAAGGGAGCTGAGGTTGCCCGCAGAGCCAATGGAGTATTTGTTTCAGAGATAGAGGCAAGGGAGGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGACATAGATAGCAGGAATGCATGTTTTGAGAGTCGGAGTTGATGGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTTCCCCCTCAAACTCCTACAGCAGAGATGCC-ATTGTCTCAGGGAGCCTGCAAGGGCCCAGCTTCCTGTCTCAGGAAGCAAATGCAAACTGGTGTCCTTCCCACCCTCACCTGCAGCATCTCCGCCCTCAGCCATTTCCCCC-TGGGCCTGGGCCTCCTCCTTTTTGCTTCCTAGCCTTATTGGAGCATCATTCTGGACCTATAACCACACACACCCACTCCCAACCCCACCAATCAGGTCATTAGAGA-----GTTTTAttttattttattttatttatttattgtgagatgggtttttgttcttgtcgccaagactggagtgcagtggcgcaatctcagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagttgggattacaggcacctgccaccacacctggctaatatttgtatttttaatagagttgggggcttcacc-tatctgtcaggctggtcttgaattcctgacctcaggtgatccactcaccttggcctcccaaactgct--ccctacaagcgtgagcca i macFas5.chr2 C 0 I 9 s papAnu2.chr2 101107094 2625 + 187378091 AAAATAATGCTagcttcaggccaggcacagtggctcac-cctgcaatcccagcactttgggaggcctaggcgggtggatcgtctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggcacagacctgtaatcccaactactcaggaagttAAGGCTtgaatcaggaggcagaggttacagtgaaccaagatcatgccactgcactccagcctgggtgacagagtgagactgcatctc--aaaaaaataaacaaataaaaataaatgctaactTCAATAGAAAAGAACTTCATTCTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTttcatggagaaaaaaagaattttttttataataatatttttaataataatattc-tttttttctgatcatgAAAGCAGTGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTAACAATAACA-TAAaggatgggcgcagtggctcatgcctgtaatcccagtactttgggagaccaaggtgaatggatcacttgaggccaggagttcgagaccagcctggccaacatagtgaagcaccatctctaccaaaaataaaaaaattagccgggcatggtggtgggtgcctgtagttctagttacttgggaggctgaggtacaagaattgcctgaacctgggaggtagaagttgcagtgagccaagatcgcatcactgcactctagcctgggcaacagagtgagatcctgtctcaaaacacataAATAAGAAGAACACTGAAATTGCTCACGAGCTGGCTATTCCTTCATTCAAATGTGTGATGGAGCTCCTTCTCACTGCCAGGTCTGCTCTGGGCTATGGA---------------GGTGAACACAACCAGAAGGGCCCTTGTTCCTGTGCCGCTGACCTGCCAGTGGGGGAAGCAGACAAGAGGCGATTCCACGGGCATGAAGTATGTCGGGTCGTCACAACGCCATGAAGAAGAATAAACAGGGCAAGAGGGACAGACAGACTAC-TGAGCTGGGCGTTCTCTGTTTGGAGGGTCagggaaaattccagaaagaagcAGAGTGAACTTTTGGATGTTTTTCCTTCCAAGCTTTCATCTAAATATTAACGTTCTTATTATCATTTACAAGTTTTTAGatgaaacttcttttaaaaaaaaagtttttcttag-aAAGCAACAcctttagccaggcatgatggcacatgcctgtagtcccag-ctactcgggaggctgaggtgggaggatcacttgagcctgggaggttaaggctacaatgagctatgggCACCACTGCAATAGACAAcaaaagcaagattctgtctc-aaaaaaaaaaaaaaaaagaaaaagaaaaaaagaaaaattgaaaagaaaaat-aaaaaaagtcatacTTGTTCATTGTAGGAGACCTGGAAGTGGTAGAAAATctggaagggaaagggagagagaagataaATCT-CCACAATGGTACCAGCATAGGATGATCCCTCCAGATGTACTGATTCATCTCCCTCCTGCTACCTTTCTCAATTGCTAAACTCACACGGTATTTACATGACTGAATCCTGCTTTTCTTAACCCCTATCATAAACATGACCCCATGTTTGTCAGAGCTTTGAAAGACAAAGTGCAAGAGACCACTGTTTCCCTTCTACGTGGGAAAAGGCCGTCACAGAAGCCCAGGCGCCATGCTCTCCTGTCTGGCTGCCTGGGTGCCGCCCTGTCTGGGAAGATCCTGGGCCTCCATTCAACCTGTCATTGAGAGAACTTCAGCCAAGTGATGAGTCCCAGATCTCCAGAAGTCAAACCCCAGGTAGAGGGATCACTTTGTGTCAGACCCAAAGGGAGCTGAGGTTGCCAGCAGAGCCAATGGAGTATTTGTTTCAGAGGTAGAGGCAAGGGAGGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGACATAGATAGCAGGAATGCATGTTTTGAGAGTCGGAGTTGATGGCCCCTCTATCTCAGAGTCTGAGGCAGCCCCAGACTTCCCCCTCAAACTCCTACAGCAGAGATGCC-TTTGTCTCAGGGAGCCTGCAAGGGCCCAGCTTCCTGTCTCAGGAAGCAAATGCAAACTGGTGTCCTTCCCACCCTCACCTGCAGCATCTCCGCCCTCAGCCATTTCCCCC-TGGGCCTGGGCCTCCTCCTTTTTGCTTCCTAGCCTTATTGGAGCATCATTCTGGACCTATAACCACACACACCCACTCCCAACCCCACTAATCAGGTCATtagaga-----gttttattttattttgttttatttatttattgtgagatggggttttgttcttgtcaccaagactggagtgcagtggcgcaatctcagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccaagtagttgggattaaaggcacctgccaccacacctggctaatatttgtatttttaatagagttgggggCTTCACC-TAtctgtcaggctggtcttgaattcctgacctcaggtgatccactcaccttggcctcccaaactgct--ccctacaagcgtgagcca i papAnu2.chr2 C 0 I 9 s chlSab2.chr15 4972902 2591 + 91754291 AAAATAATGCTAGCTTCAggccaggcgcagtggctcac-cctgtaatcccagcactttgggaggcctaggcaggtggatcgtctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcacagacctgtaatcccaactactcaggaagttaaggcttgaatcaggaggcagaggttacagtgaaccaagatcacgccactgcactccagcctgggtgacagagtgagactgcatctc--aaaaaaataaataaataaaaataaaTGCTAACTTCAATAGAAAAGAACTTCATACTCAAATGTTAGAATTGAGAGTTTGCTTCATTGTGCTATTTTCATGGAGAAAAA---------------AATAATATTT-----------ATTC-TTTTTTTCTGATCATGAAAGCAGTGAAAGTTTATTGGATAAACAGCTGGAAACTCAGAAATATAGTAAGAATAACA-TAAAGGATgggcgcagtggctcatgcctataatcccagcactttgggaggccaaggtgaatggatcacttgatgccgggagttcgagaccagcctggccaacatagtgaagcatgatctctaccaaaaattaaaaaattagccgggcatggtggtgggtgcctgtggttctaattacttgggaggctgaggcacgagaattgcctgaacctgggaggtagaagttgcagtgagccaagatcgcatcactgcactctagcctgggcaacagagtgagaccctctctcaaaatacataaataagaagaaCACTGAAATTGCTCACGAACTGGCTattccttcattcaaatgtgtgacggagctccttctcactgccaggtctgctctgggctatgga---------------ggtgaacacaaccagaagggcccttgttcctgtgccgctgacctgccagtgggggaagcagacaagaggtgattccatgggcatgaagtatgtcgggtcgtcacaacgccatgaggaagaataaacagggcaagagggacagacagactacttgagctgggcgttccctgtttggagggtcaggtaacattccagaaagaagCAGAGTGAACTTTTGGATGTTTTTCCTTCCAAGCTTTCATCTAAATATTAACGTTCTTATTATCATTTACAAGTTTTTAGATGAAACTTCTTT-AAAAAAAATGTTTTTCTTAGAAAAGCAACACCTttagccaggcatgatggcacacgcctgtagtcccagcctactcaggaggctgaggtgggaggatcgcttgagcctgggaggttaaggctacaatgagctatgggcaccactgcaatagacaacaaaagcaagactctgtctc--------aaaaaaaaaaaaaaaaggaaaaaagaaaaaTTGAAAAGAAAAATAAAAaaaagtaatacttgtttattgtagaagacctggaagtggtagaatatctggaagggaaagggagagagaagataaatct-ccacaatggtaccagcataggatgatccctccagatgtgttgatacatctccctccTGCTACCTTTCCCAATTGCTAAACTCACATGGTATTTACATGACTGAATCCTGCTTTTCTTAACCCCTATCATAAACATGACCCCATGTTTGTCAGAGCTTTGAAAGACACAGTGCAAGAGGCCACTGTTTCCCTTCTACGTGGGAAAAGGCCGTCACAGAAGCCCAGGCGCCATGCTCTCCTGTCTGGCTGCCTGGGTGCCGTCCTGTCTGGGAAGATCCTGGGCCTCCATTCAACCTGTCATTGAGAGAACTTCAGCCACGTGATGAGTCCCAGATCTCCAGAAGTCAAACCCCAGGTAGAGGGATCACTTTGTGTCAGACCCAAAGGGAGCTGAGATTGCCAGCAGAGCCAATGGAGTATTTGTTTCAGAGGTAGAGGCAAGGGAGGGTACACACCCCCAGGAGAGTCAGGTAAGAACCAAAGAGGAAGAAGACATAGATAGCAGGAATGCATGTTTTGAGAGTCGGAGTTGACGGCCCCTC--TCTCAGAGTCTGAGGCAGCCCCAGACTTCCCCCTCAAACTCCTACAGCAGAGATGCC-ATTGTCTCAGGGAGCCTGCAAGGGCCCAGCTTCCTGTCTTAGGAA------GCAAACTGGTGTCCTTCCCACCCTCACCTGCAGCATCTCCGCCCTCAGCCATTTCCCCC-TGGGCCTGGA---CCTCCTTTTTGCTTCCTAGCCTTATTGGAGCATCATTCTGGACCTATAACCACACACACCCACTCCCAACTCCACCAATCAGGTCATTAGAGAGttttgttttattttattttattttatttatttattttgggatggagttttgctcttgtcaccaggactggagtgcagtggcgcaatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctacctcagcctcctgagtagctgggactacaggcatgtgccatcacacccagctaatttttgtatttttagtagagac-agggtttcaccatgttggccaagctggtcttgaacacctgacctcaggtgatccacctggctcagcctcccaaaatactgagattacaggcgtgagcca i chlSab2.chr15 C 0 I 1588 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=281048.000000 s hg38.chr3_KI270781v1_alt 92423 225 + 113034 GCCAAGAGTTTTACAAGCAAAATATTTCTCTTC-AAAAATCTTCCAGCATGTCTACTGTATTTAAGACTATACCAAACCCTATGAAGGGTTTGGTTCTCTATGAAAGCCAGATCCTGTTGGCCAAAGGTGTCAGGGGCTTC----------CTCACAATCTGCACTCATATCTTGCACGTTTCACCAAGAtccaaatggtctggtacttggagcaatctttgttcatgcacctaca s panTro4.chr3 13841888 225 - 202329955 GCCAAGAATTTTACAAGCAAAATATTTCTCTTC-AAAAATCTTCCAGCATGTCTACTGTATTTAAGACTATACCAAACCCTATGAAGGGTTTGGTTCTCTATGAAAGCCAGATCCTGTTGGCCAAAGGTGTCAGGGGCTTC----------CTCACAATCTGCACTCATATCTTGCATGTTTCACCAAGATCCAAATGGTCTGGTACTTGGAGCAATCTTTGTTCATGCACCTACA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14377022 224 - 123690457 GCCAAGAGTTTTATAAGCAAAATGTTTCTCTTC-AAAAATCTTCCAGCATGTCTACTGTA-TTGAGACTATACCAAACCCTATGAAGGGCTTGGTTCTCTATGAAAGCCGGATCCTGTTGGCCAAAGGTGTCAGGGGCTTC----------CTCACAATCTGCACTCATATCTTGTATGTTTCACCAAGATCCAAATGGTCTGGTACTTGGAGCAATCTTTGTTCATGCACCTACA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103672711 236 + 192599291 gtcAAGAGTTTTATAAGCAAAATGTTGCTCTTCAAAAAATCTTCCAGCATGTCTACTGTACCTAAGACTACACGAAACCCTATGAAGGGTTTGGTTCTCTGTGAAAGACGGATCCTGTTGGCCAAAGGTGTCAGCAGGTACTGCCCCAGATCTCACAATCTGCACTCATATCTTGCATGTTTCACCAAGATCCAAATGGTCTGGTACTTGGAGCAATCTTAGTTCACGCACCTACA i rheMac3.chr2 I 9 I 316 s macFas5.chr2 103317407 236 - 192460366 gtcAAGAGTTTTATAAGCAAAATATTGCTCTTCAAAAAATCTTCCAGCATGTCTACTGTACCTAAGACTACACAAAACCTTATGAAGGGTTTGGTTCTCTGTGAAAGACGGATCCTGTTGGCCAAAGGTGTCAGCAGGTACTGCCCCAGATCTCACAATCTGCACTCATATCTTGCATGTTTCACCAAGATCCAAATGGTCTGGTACTTGGAGCAATCTTAGTTCACGCACCTACA i macFas5.chr2 I 9 I 319 s papAnu2.chr2 101109728 236 + 187378091 gtcaagaGTTTTATAAGCAAAATGTTGCTCTTCAAAAAATCTTCCAGTATGTCTACTGTACCTAAGACTACACGAAACCCTATGAAGGGTTTGGTTCTCTGTGAAAGACAGATCCTGTTGGCCAAAGGTGTCAGCAGGTACTGCCCCAGATCTCACAATCTGCACTCATATCTTGCATGTTTCACCAAGATCCAAATGGTCTGGTACTTGGAGCAATCTTAGTTCACGCACCTACA i papAnu2.chr2 I 9 I 321 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4975493 1588 + 91754291 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1065045.000000 s hg38.chr3_KI270781v1_alt 92648 595 + 113034 aagtcttgcTactttctacctgtgtgtcagtaagcaaattacttgccctttctgagcacctggttttcttacctgaaaaaaaaaaggtg-------ggggaataataatttgcacctcttagggttgtgtaaggatcaagaggcgcactgcctgtgaagtgccagcatatagtcagtgctcaacaaacagGGGACATGGTCATCCATACTGTCTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAG--ATTTTTTTGCCTGCCTTGAAAACTTTTCCACCCAAGAcaaaggtcacgtactcagatgccttcaggccggtcaggtaagataaataagagaaga-gggtgtggtagaaattaggcaaactggagagGAGCCCAGGCTGCTTGATCTCTGgcaggaatgcaaggctcgagttcagatcttctgatttttctcctctaaggaaagccataaatctgga-ttt--tttgtgtgtgtaaaatgactggatcttttaaaatgtggcaGTAAGTCCTTTTGCTAAAAAACAGATGCAGACAAAACCAATGTGTAGAGCTTTGCAGGGAATGGCAGGTTGGTGTGCTGAAAGATGCCTCGTTAT s panTro4.chr3 13842113 596 - 202329955 AAGTCTtgctactttctagctgtgtgtcagtaagcaaattacttgccctttctgagcacctggttttcttacctgaaaaaaaaaaggtg-------ggggaataataatttgcacctcttagggttgtgtaaggatcaagaggcgcactgcctgtgaagtgccagcatatagtcagtgctcaacaaacagGGGACATTGTCATCCATACTGTTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAG--ATTTTTTTGCCTGCCTTGAAAACTTTTCCACCCAAGAcaaaggtcacatactcagatgccttcaggccggtcaggtaagataaataagagaaga-gggtgtggtagaaattaggcaaactggagagGAGCCCAGGCTGCTTGATCTCTGgcaggaatgcaaggctcgagttcagatcttctgatttttctcctctaaggaaagccataaatctggatttt--tttgtgtgtgtaaaatgactggatctttcaaaatgtggcaGTAAGTCCTTTTGCTAAAAAACAGATGCAGACAAAACCAATGTGTAGAGCTTTGCAGGGAATGGCAGGTTGGTGTGCTGAAAGATGCCTCGTTAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14377246 593 - 123690457 AAGTCTtgctactttctagctgtgtgtcagtaagcaaattacttgccctttctgagcacctggtttccttacctg-aaaaaaaaaggtg-------ggagaataataatttgcacctcttagggttgtgtaaggatcaagaggtgcactgcctgtgaagtgccagcatacagtcagtgctcaacaaacagGGGACATTGTCATCCATACTATTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAG--ATTGTTTTTCCTGCCTTGAAAAC-TTTCCATCCAAGAcaaagttcacatactcagatgccttcaggccggtcaggtaagataaataagagaaga-gggtgtggtagaagttaggcaaactggagagGAGCCCAGGCTTCTTGATCTCTGgcaggaatgcaaggctcgaattcagatcttctgatttttctcctctaaggaaatccataaatctgga-ttt--tgtgtgtgtgtaaaatgactggatcttttaaaatgtggcaGTAAGTCCTTTTCCTAAAAAACAGATGCAGACAAAACCAGTGTGTAGCGCTTTGCAGGGAATGGCAGGTTGGGGTGCTGAAAGATGCCTCGTTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103673263 605 + 192599291 aagtcttgctactttctagctgtgtgtcagtaagcaaattatttgccctttctgagcacctggttttctcatctgagaaaaaaaaagcaggggggcggggaataatagtttgcacctcttagggttgtgtaaggatcaagaggcgcactgcctgtgaagtgccagcatatagtcagtgctcaacaaaCAGGGTACTTTGTCATCCACACTATTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAGGAGGTATTTTTCCTGCCTTGAAAACTTTTCCATCCAAGACAAAGGTCACGTATTCAGATGCCTTCAGGCCCGTCAGGTAAGATAAGTAAGAGAAAAGGGGTGTGGAAGAAATTAGGCAAACCGGAGAGGAGCCCAGGCTGCTTGATCTCTGgcaggaatgcaaggcttgagttcagatcttctgatttttctcttctaaggaaagccataaatctgga-ttt--tttttgtgtgtaaaatgactggatcttttaaaatgtggcaataagtccttttttaaaaaaactgatgcagacaaaacCAGTGTGTAGCGCTTTGCAGGGAATGGCGGGTTGGTGTGCTGAAAGACGCCTCGTTAT i rheMac3.chr2 I 316 C 0 s macFas5.chr2 103317962 605 - 192460366 aagtcttgctactttctagctgtgtgtcagtaagcaaattatttgccctttctgagcacctggttttctcatctgagaaaaaaaaagcaggggggcggggaataatagtttgcacctcttagggttgtgtaaggatcaagaggcgcactgcctgtgaagtgccagcatatagtcagtgctcaacaaaCAGGGTACTTTGTCATCCACACTATTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAGGAGGTATTTTTCCTGCCTTGAAAACTTTTCCATCCAAGAcaaaggtcacgtattcagatgccttcaggcccgtcaggtaagataagtaagagaaaaggggtgtggaagaaattaggcaaaccggagaggagcccaggctgcttgatctctggcaggaatgcaaggcttgagttcagatcttctgatttttctcttctaaggaaagccataaatctgga-ttt--tttttgtgtgtaaaatgactggatcttttaaaatgtggcaataagtccttttttaaaaaaactgatgcagacaaaacCAGTGTGTAGCGCTTTGCAGGGAATGGCGGGTTGGTGTGCTGAAAGACGCCTCGTTAT i macFas5.chr2 I 319 C 0 s papAnu2.chr2 101110285 605 + 187378091 AAGTCTTgctactttctagctgtgtgtcAGTAAGCAAATTATTTGCCCTTTCTGAGCACCtggttttctcatctgagaaaaaaaaagcaggggggcGGGGAATAATAGTTTGCACCTCTTAGGGTTGTGTAAGGATCAAGAGGCGCACTGCCTGTGAAGTGCCAGCATATAGTCAGTGCTCAACAAACAGGGTACTTTGTCATCCATACTATTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAGGAGGTATTTTTCCTGCCTTGAAAACTTTTCCATCCAAGACAAAGGTCACGTATTCAGATGCCTTCAGGCCGGTCAGGTGAGATAAATAAGAGAAGAGGGGTGTGGTAGAAATTAGGCAAACCAGAGAGGAGCCCAGGCTGCTTGATCTCTGGCAGGAATGCAAGGCTTGAGTTCAGatcttctgatttttctcttctaaggAAAGCCATAAATCTGGA-TTT--TTTGTGCGTGTAAAATGACTGgatcttttaaaatgtggcagtaagtccttttttaaaaaaacggaTGCAGACAAAACCAGTGTGTAGCGCTTTGCAGGGAATGGCGGGTTAGTGTGCTGAAAGACGCCTCGTTAT i papAnu2.chr2 I 321 I 809 s chlSab2.chr15 4977081 606 + 91754291 aagtcttgctactttctagctgtgtgtcagtaagcaaattatttgccctttctgagcacctggttttctcatctgaggaaaaaaaagcaggggggcggggaataatagtttgcacctcttagggttgtgtaaggatcaggaggcgcactgcctgtgaagtaccagcatatagtcagtgctcaacaaaCAGGGGATTTTGTCATCCATACTATTTTATGACCAAGAAACTTCTGGGTTGGCCAACATAAGGAGGT-TTTTTCCTGCCTTGAAAACTTTTCCATCCACGAcaaaggtcacgtattcagatgccttcaggctggtcaggtgagataaatgagagaagaggggtgtggtagaaattaggcaaaccagagaggagcccaggctgcttggtctctggcaggaatgcaaggcttgagttcagatcttctgatttttctcttctaaggaaagccataaatacgga-ttttgtgtgtgtgtgtaaaatgactggatcttttaaaatgtggcagtaagtccttttttaaaaaaattgatgcagacaaaacCAGTGTGTAGTGCTTTGCAGGGAATGGCGGGTTGGTGTGCTGAAAAATGCCTCGTTAT i chlSab2.chr15 I 1588 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=1076940.000000 s hg38.chr3_KI270781v1_alt 93243 603 + 113034 AAAATGATGTTTACATGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGGGTGTGGGGCACAAAATGGGGGTGGGCTTTGGAGTTTGTATCTTGTGTGTGGCCTCAGGAGTGGGTGACTGAAGTGAGTCAATCCCCCAGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTCAACAAGGACATGGGAAGTGCCCTGAGCTGCCAGGGAAAACCGTGGAATTCATGCCAAAATCTTTAGTGGGCAAGCGAGGTGACCCAGCGACAGATAC-GGGAGGACCGGAAGGTAGGAGACTGGGGAGCACAAGCTTCAAAGGGaaagcaggggttacgatgctacctcagagaggggctttgcaatctgcatggaatgattgtgcaaaaggcttaccaccagcctggcgcacacagatgctcaacaaatatcaattcAAGTAatttattgattttcacaataaatacttcctgggggtatactatgtgccagatactaggggcgagcaagatcccagggttccttcattgagggaacagagagggcagtggagaagccaggtgagttaacgagcacttgcaggacagtgtggtaag s panTro4.chr3 13842709 600 - 202329955 AAAATAACGTTTACATGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGGGTGTGGGGCACAAAATGGGGGTGGGCTTTGGAGTTTGTATCTTGTGTGTGGCCTCAGGAGTGGGTGACTGAAGTGAGTCAACCCCCCAGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTCGACAAGGACATGGGAAGTGCCCTGAGCTGCCAGGGAAAACCATGGAATTCATGCCAAAATCTTTAGTGGGCAAGTGAGGTGACCCAGCGACAGATAC-AGGAGGACCGGAAGGTAGGAGATTGGGGAGCACAAGCTTCGAAGGGaaagcaggggttacgatgctacctcagagaggggctttgcaatctgcgtggaatgattgtgcaaaaggcttaccaccagcctg--gcacagagatgctcaacaaatATCAATGCAGGTAatttattga-tttcacaataaatacttcctgtgggtatactatgtgccagatactaggggcgatcaagatctcagggttccttcattgagggagcagagagggcagtggagaagccaggcgagttaacgagcacttgcaggacaatgtggtaag i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14377839 601 - 123690457 AAAATGACGTTGACATGGAGAGCAGTGGGGGTCTGCATGAGGGGAGGACAGGGGTGTGGGGCACAAAATGGGGGTGGGGTTTGGAGTTTGTATCTTGTGTGTGGCCTCAGGAGTGGGTGACTGAAGTGAGTCAACCCCCCAGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTCGACAAGGACATGGGAAGGGCCC-GAGCTGCCAGGGAAAACCATGGAATACATGCCAAAATCTTT-GTGGGCAAACGAGCTGACCCAGTGACAGATACAAGGAGGACCGGAAGGTAGGAGATCGGGGAGCACAAGCTCCT-AGGGAAAGCAGGGGTTACGATGCTACCTCAGAGAGGAGCTTTGCAATCTGCGTGGAATGATTGCGCAAAAGGCTTACCACCAGCCCGGCGCACACAGATGCTCAACAATTATCAATTCAGGTAatttattgattttcacaataaatactttctgggggtataccatgtgccagatactaggggcaagcaagatcccagggttccttcatcgagggagcagagagggcagtggagaagccaggcgagttaacgagcacttgcaggacagtgtggtaag i nomLeu3.chr11 C 0 I 248 s rheMac3.chr2 103673868 602 + 192599291 AAAATGACATTTACATGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGCGTGTGGGGCACAAAATGGGGGTGGGGTTTGGAGTTTGTGTCTTGTGTGTGGCCTCAGGAGTGGGTGGCTAAAGTGAGTCAACCCCCCGGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTGGACAAGGACATGGGAAGGGCCT-GAGCTGCCAGGGAAAACCATGGAATACGTGCCAAAATCTTTAGTGGGCAAGCGAGGTGACCGAATGACAGATACAAGGGGGACCAGAAGGTGGGAGATCGGGGAGCACAAACTTCTAAGGGAAAGCAGGGGTTACGACGCTACCTCAGAGAGGAGCTTTGCAATCTGCGTGGAATGATTGTGCAAAGGGCTTACCACCAGCCTCGTGCACACAGATGGTCAGCAAATATCAATTTGGGTAatttattaattttcacaataaatacttcctgggggtatactatgtgccagatactaggtgcgagcaagatcccagggttccttcattgagggagaagagagggcagtggag-agccaggcgagttcacgagcacttgcaggacagtggggtaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103318567 602 - 192460366 AAAATGACATTTACATGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGCGTGTGGGGCACAAAATGGGGGTGGGGTTTGGAGTTTGTGTCTTGTGTGTGGCCTCAGGAGTGGGTGGCTAAAGTGAGTCAACCCCCCGGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTGGACAAGGACATGGGAAGGGCCT-GAGCTGCCAGGGAGAACCATGGAATACGTGCCAAAATCTTTAGTGGGCAAGCGAGGTGACCGAATGACAGATACAAGGGGGACCAGAAGGTGGGAGATCGGGGAGCACAAACTTCTAAGGGAAAGCAGGGGTTACGACGCTACCTCAGAGAGGAGCTTTGCAATCTGCGTGGAATGATTGTGCAAAACGCTTACCACCAGCCTCGTGCACACAGATGGTCAGCAAATATCAATTTGGGTAatttattaattttcacaataaatacttcctgggggcatactatgtgccagatactaggtgcgagcaagatcccagggttccttcattgagggagaagagagggcagtggag-agccaggcgagttcacgagcacttgcaggacagtggggtaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101111699 602 + 187378091 aaaatgacatttacatGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGCGTGTGGGGCACAAAACGGGGGTGGGATTTGGAGTTTGTGTCTTGTGTGTGGCCTCAGGAGTGGGTGACTGAAGTGAGTCAACCCCCCAGAGATGAGGGGCCTCAAGAACAGGGAAGCCAGCATGGGGCTTTCTGGACAAGGACATGGGAAGGGCCT-GAGCTGCCAGGGAAAACCATGGAATACGTGCCAAAATCTTTAGTGGGCAAGCGAGGTGACCGAATGACAGATACAAGGGGGACCAGAAGGTGGGAGATCGGGGAGCACAGACTTCTAAGGGAAAGCAGGGGTTATGATGCTACCTCAGAGAGGAGCTTTGCAATCTGCGTGGCATGATTGTGCAAAAGGCTTACCACCAGCCTCGTGCACACAGATGGTCAGCAAATATCAATTCGggtaatttattgattttcataataAATACTTCCTGGGGgtatactatgtgccagatactagGTGCGAGCAAGATCCCAGGGTTCCTTTATTGAGGGAGAAGAGAGGGCAGTGGAG-AGCCAGGCGAGTTCACGAGCACTTGCAGGACAGTGGGGTAAG i papAnu2.chr2 I 809 C 0 s chlSab2.chr15 4977687 602 + 91754291 AAAATGACATTTACATGGAGAGTAGTGGGGGTCTGCATGAGGGGAGGACAGGAGTGTGGGGCACGAAACAGGGATGGGGTTTGGAGTTTGTGTCTTGTGTGTGGCCTCAGGAGTGGGTGACTGAAGTGAGTCAACCCCCCGGAGATGAGGGGCCTCAAGAACAGGGAAGCCACCATGGGGCTTTCTGGACAAGGACATGGGAAGGGCCT-GAGCTGCCAGGGAAAACCATGGAATATGTGCCAAAATCTTTAGTGGGCAAGCGAGGTGACCGAATGACAGATACAAGGGGGACCAGAAGGTGGGAGATCGGGGAGCACAAACTTCTAAGGGAAAGCAGGGGTTACGATGCTACCTCAGAGAGGAGCTTTGCAATCTGCGTGGAATGATTGTGCAAAAGGCTTACCACCAGCCTCGTGCACACAGATGGTCAGCAAATATCAATTCGGGTAatttattgattttcataatgaatacttcctgggggtatactatgtgccagatactaggtgcgagcaagatcccagggttccttctttgagggagaagagagggcagtggag-agccaggcgagttcacgagcacttgcaggacagtggggtaag i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=7255.000000 s hg38.chr3_KI270781v1_alt 93846 7 + 113034 gacgatg- s panTro4.chr3 13843309 7 - 202329955 gacgatg- i panTro4.chr3 C 0 C 0 s rheMac3.chr2 103674470 8 + 192599291 gacgatgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319169 8 - 192460366 gacgatgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112301 8 + 187378091 GACGATGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4978289 8 + 91754291 gacgatgg i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14378440 248 - 123690457 I a score=618964.000000 s hg38.chr3_KI270781v1_alt 93853 358 + 113034 ggccatacacagagccaggggacggagagagcctcctggaACCCAACGAGCAAATAGGACAAGCATGTGAAAACGGAGTTGGACTACTGTCCCGACAGGGG-AAAGGTTCTGGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGAGGAGCTGAAAAAAATGCGGCAGAGCTGTCTCCCAGCTGACAGG----GGTAGCACGCAGGAGCTTCCCAGGAGTGAGGTTTCTCCCAGGACCTAGGAGATTCCATAGGAGGGTTTAAGTAGAAAAATG--CCC--CTtaaccagcatttatat----cacccaactgtgtgccaagcactctgcaaatgactataaaatta-taggcacacttaattcatgtaatc s panTro4.chr3 13843316 358 - 202329955 ggccatacacagagccaggggatggagagagcctcctggaACCCAACGAGCAAATAGGACAAGCATGTGAAAAGGGAGTTGGACTACTGTCCCGACAGGGG-AAAGGTTCTGGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGAGGAATTGAAAAAAATGCGGCAGAGCTGTCTCCCAGCCGACAGG----GGTAGCACGCAGGAGCTTCCCAAGAGTGAGGTTTCTCCCGGGACCTAGGAGATTCCATAGGAGGGTTTAAGTAGAAAAACG--CCC--CTTAACCAGCATTTATAT----CACCCAACTGTGTGCCAAGCACTCTGCAAATGACTATAAAATTA-TAGGCACACTTAATTCATGTAAAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14378688 363 - 123690457 GGCCATACACAGAGCCAGGGGATGGAGAGAGCCT-CTGGAACCCAACGAGCAAATAGGACAAGCATGTGAAAAGGGAGGTGGACTACTGTCCCGACAGGCG-AAAGGTTCTGGAAGCTGGAGGCTGTAAATCAGCAGAGCAATGGAGGAGTTGAACAAAATGCGGCAGGGCTGTCTCCCAGCCGACAGGGCTAGGTAGCATGCAGGAGCTTCCCAGGAGTGAGGTTTCTCCCGGGACCTAGGAGATTCCACAGGAGGGTTTAAGTAGAAAAATGCCCCC--CTTAACCAGCATTTATAT----CATCCAGCTGTGTGCCAAGCATTCTGCAAATGACTATAAAATTA-TAAGCACGTTTAATTCATATAATC i nomLeu3.chr11 I 248 C 0 s rheMac3.chr2 103674478 358 + 192599291 ggccatacgcagaggtaggggacagagagagcctcctggaACCCAATGAGCAAACAGGACAAGCATGTGACAAGGCAGGTGGACTACTGTCCCGACAGGGGAAAAGGTTCTGGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGAGGAGTTGAAAAAAATGCGGCAGAGCTGGCTCCCAGCCGACAGG----GGTGGCATGCAGGACCTTCCCCCGAGTGAGGTTTCTCCCGGGACCTAGGAGATTCCACAGGAGGGTTTAAGTAGAAAAACG--CCCAGCTtaaccagcatttatat----cacccaactgtgtgccaaacactctgcaaatgactataaaa----taggcacatttacttcatgtaatc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319177 358 - 192460366 ggcaatacgcagaggtaggggacagagagagcctcctggaACCCAATGAGCAAACAGGACAAGCATGTGAAAAGGCAGGTGGACTACTGTCCCGACAGGGGAAAAGGTTCTGGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGAGGAGGTGAAAAAAATGCGGCAGAGCTGGCTCCCAGCCGACAGG----GGTGGCATGCAGGACCTTCCCCCGAGTGAGGTTTCTCCCGGGACCTAGGAGATTCCACAGGAGGGTTTAAGTAGAAAAACG--CCCAGCTTAACCAGCATTTATAT----CACCCAACTGTGTGCCAAACACTCTGCAACTGACTATAAAA----TAGGCACATTTACTTCATGTAATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112309 362 + 187378091 GGCCATACACAGACGTAGGGGACAGAGAGAGCCTCCTGGAACCCAATGAGCAAACAGGACAAGCATGTGACAAGGCAGGTGGACTACTGTCCCGACAGGGGAAAAGGTTCTGGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGAGGAGCTGaaaaaaaTGCGGCAGAGCTGGCTCCCAGCCGACAGG----GGTGGCATGCAGGACCTTCCCCCGAGTGAGGTTTCTCCCGGGACCTAGGAGATTCCACAGGAGGGTTTAAGTAGAAAAACG--CCCAGCTTAACCAGCATTTATTTGGCACACCCAACTGTGTGCCAAACACTCTGCAAATGACTATAAAA----TAGGCACATTTACTTCATgtaatc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4978297 362 + 91754291 ggccatacacagaggtaggggacagagagagcctcctggaACCCAATGAGCAAACAGGACAAGCATGTGAAAAGGCAGGTGGACTACTGTCCTGACAGGGGAAAAGGTTCTGGAAGCTGGAGGCTGTGACTCAGCAGAGCAATGGAGGAGCTGAAAGAAATGCGGCAGAGCTGGCTCCCAGCCGACAGG----GGTGACATGCAGGACCTTCCCCCGAGTGAGCTTTCTCCCGGGACCTAGGAGATTCCACAGGAGGGTTTAAGTAGAAAAACG--CCCAGCTTACCCAGCATTTATAT----CACCCAACTGTGTGCCAAACACTCTGCAAATGACTATAAAATTATTAGGCACACTTACTTCATGTAATC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=398.000000 s hg38.chr3_KI270781v1_alt 94211 1 + 113034 c s panTro4.chr3 13843674 1 - 202329955 c i panTro4.chr3 C 0 C 0 s rheMac3.chr2 103674836 1 + 192599291 t i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319535 1 - 192460366 t i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112671 1 + 187378091 t i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4978659 1 + 91754291 t i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14379051 0 - 123690457 C a score=1692.000000 s hg38.chr3_KI270781v1_alt 94212 6 + 113034 tTCTTc s panTro4.chr3 13843675 6 - 202329955 ttcttc i panTro4.chr3 C 0 C 0 s chlSab2.chr15 4978660 6 + 91754291 ttcttc i chlSab2.chr15 C 0 T 3415 e ponAbe2.chr3 13825436 11466 - 202140232 I e papAnu2.chr2 101112672 0 + 187378091 C e macFas5.chr2 103319536 0 - 192460366 C e rheMac3.chr2 103674837 0 + 192599291 C e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14379051 0 - 123690457 C a score=-3898.000000 s hg38.chr3_KI270781v1_alt 94218 107 + 113034 tccccctccccctccccctccccctccccctgcccctcccctccccctccccctccccctccccccttctccttctccttctccttctccttctccttctccttctt s panTro4.chr3 13843681 68 - 202329955 ttcctcttcctcttcctcttcctcttcc---------------------------------------tcttcctcttcctcttcttcttcttcttcttcttcttctt i panTro4.chr3 C 0 C 0 s macFas5.chr2 103319536 14 - 192460366 ------------------------------------------------------------------------ttcttccttttttt--------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112672 14 + 187378091 ------------------------------------------------------------------------ttcttccttttttt--------------------- i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4978666 3415 + 91754291 T e rheMac3.chr2 103674837 0 + 192599291 C e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14379051 0 - 123690457 C a score=-273.000000 s hg38.chr3_KI270781v1_alt 94325 4 + 113034 cttc s panTro4.chr3 13843749 4 - 202329955 cttc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14379051 4 - 123690457 tttc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103319550 3 - 192460366 ttt- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112686 3 + 187378091 ttt- i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4978666 3415 + 91754291 T e rheMac3.chr2 103674837 0 + 192599291 C e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=44151.000000 s hg38.chr3_KI270781v1_alt 94329 48 + 113034 ttcttcttcttcttctttttgagatggagtcttgctctgttgcccagg s panTro4.chr3 13843753 48 - 202329955 ttcttcttcttcttctttttgaaatggagtcttgctctgttgcccagg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14379055 47 - 123690457 ttcttctt-tttttttttttgagacggagtctttctctgttgcccagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103674837 48 + 192599291 ttcttcctttttttttttttgagacagagtcttgctgtattgcccagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319553 34 - 192460366 --------------ttttttgagacagagtcttgctctgttgcccagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112689 38 + 187378091 ----------ttttttttttgagacagagtcttgctctgttgcccagg i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4978666 3415 + 91754291 T e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=207622.000000 s hg38.chr3_KI270781v1_alt 94377 118 + 113034 ctggagtgcagtggcatgatctcggctcactgcaaactctgcctcctggattcaagcaattctcctgcctcagcctcccgagtagctaggactacaggcgtgtgccatcacacccagc s panTro4.chr3 13843801 115 - 202329955 ctggagtgcagtggcatgatctcggcccactgcaacctctgcctcctggattcaagcaatt---ctgcctcagcctcccgagtagctgggactataggcgtgtgccatcacacccagc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14379102 118 - 123690457 ctggagtgcagtggcacaatcttggctcactgcaacctccgcctcctgagttcaagcaattctcctgccttagcctcgtgagtagctgggactacaggtgtgtgccatcgcaccaggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103674885 118 + 192599291 ctggagtgcagtggcgcgatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctccctcagcctcctgagtagctgggactacaggcatgtgccatcacacccagc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319587 118 - 192460366 ctggagtgcagtggcgcgatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctacctcagcctcctgagcagctgggactacaggcatgtgccatcacacccagc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101112727 118 + 187378091 ctggagtgcagtggcgcaatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctacctcagcctcctgagtagctgggactacaggcatgtgccaccacacccagc i papAnu2.chr2 C 0 I 316 s chlSab2.chr15 4975251 118 + 91754291 ctggagtgcagtggcgcaatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctacctcagcctcctgagtagctgggactacaggcatgtgccatcacacccagc i chlSab2.chr15 T 3415 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=2457662.000000 s hg38.chr3_KI270781v1_alt 94495 1394 + 113034 taatttttgtatttttaatagagacagggtttcaccaagttggccaagctggtctcaaactcctgacctcaggtgatccacctgcctcagcctcccaaaacactgggattacaggcatgagccaccacgcctgaccAAATTTATGTAATCTTTCTACCAGCCTTATGAAGTaggtccactatctgctaacatcaatttccacaatccaaaactctcccaacctaaagattttcataacttatttggcagcaaaatttgagctgaactgacatctttattgatgtgaactgacattctgtctttatttatcctcatgtaatgtgaatatttgtatgtttcactgcagaaatgccatgtctgattgcagggtattgccccagatctcactaggagtgttaaaaaatacaagacacaggcaaagtactgccttttataaaatgcagaatttctgaattctgaaacatatgtgatcccaagggttttggataaaagattgtATAAAACctgttaatattctcattttacagatgaggaagctgaaggataagtaatttccccaaggtcatataggtagtaagtaagaaagccacaatatgaacccaggtagtttggccctggagtccatgctGCATTGCATGTAAGCTATTCTCCACTTCAGAAAGATGTCTATCGTTGCCATTAAGACAATAGATGGAGGAAAAGGAATAAAGAAGAAAGCCATGGCAGTCAACCAGACATAGGGTAATGGTAGGGATGGAAGGGAATAGAGAGTTAAGAGATGTTTAAAGGAAAATCGACCGAACCTGGTGGTTGTAAGCTGGCTGAGAGAGGTTGAGCATCGTGGGCAGATAAGTAAAGGACACATGGGGTTCTGGGTTCAGCCCTGGGGAGGCTGGATGGTGGGTCACTCAGTGATGTGGGGAAGAGAAGAGGGAGGGGAGGGAGAAGAAGATCGTGAATTCTGTATTCCATGCCACATGTTTAAGTTGGGATGTCAACTAGGTAGGTGGATATACATGGCTGGTGCTTGAGAAAGAGGGCTGGGATCAAGATAAAGAGTCGGGAATTGCTAGATGCAGGTGGTCATTAAGACATGAGCATGGACTGAGTGATGACACAAAGGTCTAAGTTAGAACGTGAAAGAACCCCAACCCTGAAGGGTAGGGAAGTAGAGAGGAAGAGAATGCCAGAggctgggtgtagtggctcacacctataatcccagcacattggaaggccaagatgggaggatcacctgaggtcaggagttcgagaccagtctggccaacatggcaaaaccctgtctctactaaaaat-taaaaaaaattatctgggcgtggtggcccatgcctgtagtcccagctaatcag-gaggctgaagcaggagaatcgttt s panTro4.chr3 13843916 1394 - 202329955 taatttttgtatttttagtagagacagggtttccccaagttggccaagctggtctcgaactcctgacctcaggtgatccacccgcctcagcctcccaaaacactgggattacaggcgtgagccaccacgcctgaccAAATTTATGTAATCTTTCTACCAGCCTTATGAAGTaggtccactatctgctaacatcaatttccacaatccaaaactctcccaacctaaagattttcataacctatttggcagcaaaatttgagctgaactgacatctttattgatgtgaactgacattctgtctttatttatcctcatgtaatgtgaatatttgtatgtttcactgcagaaatgccatgtttgattgcagggtattgccccagatctcactaggagtgttaaaaaatacaagacacaggcaaagtactgccttttataaaatgcagaatttctgaattctgaaacatatgtgatcccaagggttttggataagagattgtATAAAACctgttaatattctcattttacagatgaggaagctgaaggataagtaatttccccaaggtcatataggtagtaagtaagaaagccacaatatgaacccaggtagtttggccctggagtccatgctGCATTGTATCTAAGCTATTCTCCACTTTAGAAAGATGTCTATCGTTGCCATTAAgacaatagatggaggaaaagaaataaagaagaaagccatggcagtcaaccagacatagggtaatggtagggatggaagggaatagagagttaagagatgtttaaaggaaaatcgaccgaacctggtggttgtaagctggctgagagaggttgggcatcgtgggcagataagtaaaggacacatggggttctgggttcagccctggggaggctggatggtgggtcactcagtgatgtggggaagagaaggaggaggggagggagaagaagatcgtgaattctgtattccatgccacatgtttaagttgggatgtcaactaggtaggtggatatacatggctggtgcttgagaaagagggctgggatcaagataaagagtcgggaattgctagatgcaggtggtcattaagacatgagcatggagtgagtgatgacacaaaggtctaagttagaacgtgaaagaaccccaaccctgaagggtagggaagtagagaggaagagaatgccagaggctgggtgtagtggctcacacctataatcccagcacattggaaggccaagatgggaggatcacctgaggtcaggagttcgagaccagtctggccaacatggcaaaaccccgtctctactaaaaat-taaaaaaaattatctgggcgtggtggcccatgcctgtagtcccagctaatcag-gaggctgaagcaggagaatcgttt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14379220 1393 - 123690457 taatttttgtatttttagtagaaacagggtttcaccatgttggccaagctggtctcaaactcctgacctcaggtgatccaccctcctcagcctcccaaaatattgggattataggcatgagccaccgcgcctgaccAAATTTATGTAATCTTTCTACCAGCCTTATGAAGTaggtccactatctgctaacgtcaa-ttccacaatccaaaactctcccaacctaaagattttcataacttatttggcagcaaaatttgagctgaattgacatctttattgatctgaactgacattctatctttatttatcctcatgtaatgtgaatatttgtatgtttcactgcagaaatgccatgtttgattgcagggtattgccccatatctcactaggagtgttaaaaaatataggacacaggcaaagtactgccttttataaaatgcagaatttctgaattctgaaacatatgtgatcccaagggttttggataagagattgtgTAAAAGctgttaatattctcattttacagatgaggaagctgaaggataagtaatttccccaaggtcttataggtagtaagtaagaaagccacaatatgaacccaggtagtttggccctggagtccatgctgcattgcatctaagctattctCCACtttagaaagatgtctatagttgctattaagacaatagatggaggaaaagaaataaagaagaaagccatggcagtcaaccagacatagggtaatggtggggatggaagggaatggagagttaagagatgtttaaaggaaaatcgactgagcctggtggttgtaagctggctgggagaggttgggcatcgtgggcagataagtaaaggacacatggggttctgggttcagccctggggaggctggatggtgggtcactcagtgatgtggggaagagtagagggaggggagggagaaaaagatcgtgagttctgtattccatgccacatgtttaagttgggatgtcaattaggtaggtggatatacatggctggtgcttgagaaagaggcctgagatcaagataaagagtcgggaattgctagatgcgggtgatcatt-agacatgagcatggactgagtgatgacacaaaggtctaagttagaacgcaaaagaaccccaaccctgaagggtagggaagtagagaggaagagaatgccagagactgggtatagtggctcacacctgtaatcccagcacgttggaaggccaagatgggaggatcacctgagggcaggagttcgagaccagtctggccaacatggcaaaactctgtctctactaaaaataaaaaaaaaattagctgagcgtggcggcccatgcctgtagtcccagctaatcag-gaggctgaagcaggagaatcgttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103675003 1364 + 192599291 taatttttgtatttttagtagagacagggtttcaccatgttggccaagctggtcttgaacacctgacctcaggtgatccacccagctcatcctgccaaaatactgagattacaggcgtgagcccccacgcctgaccaaatttatgtaatctttctaccagccttatgaagtaggtccactatctgctaacatcaa-ttccacaatccaaaactctcccaatctaaagattttcataacttatttggcagcaaaatttgagctgaactgacatctttattgatccgaactgacattctatctt-----------------tgtgaatatgtgtatgtttcactgcagaaacgccatgtttgattgcagggtactgccccagatctcaccagggacgtt-aaaaacataggacacaggcaaagtgctgccttttataaaatgcagaacttctgaattctgaaacatacgtgatcccaagggtttgggataagagattgtATAAAACctgtcaatattctcattttacagatgaggaagctgaaggataagtaatttccccaaggtcatataggtagtaagtaagaaagccacaatatgaacccaggaagtttggccctgcagtctatgcAGCATTGCATCTAAGCTATTCTCCACTTTAGAAAGATGTCTACAGTTGCTATTAAGACAATAGATGGAGAAAAAGAAATAGAGAAGAATGCCATGGCAGTCAACCAGACATA-----------GGGATGGAAGGGAATGGAGAGTTAAGAGATGTTTAACGGAAAATTGACTGAGCCTGGTGGTTGTAAGCTGGCTGGGAGAGGTTGGGCATCACACGCagataagtaaaggacacatggggttctggcttcacaactggggaggccggatggtgggtcactcagtgatgcagggaacagaagagggaggggagggagaagaaggtcatgaattctgtattccatgtcacatgtttaagttgggatgtcaactaggtaagtggctatacatggctggtgcttgagaaagaggcctgggatcaagataaagagttgggaattgctagatgcaggtggtcattaagacatgagcatggactgagtggtgacacaaaggtctaagttagaacgtgaaagaaccccaaccctgaagggtagggaagtagagaggaagagaatgccagaggctgggcacggtggcgcacacctgtaatcccagcactttggaaggccgagatgggaggatcacctgaagtcaggagttcaagaccagtctgaccaacatggcaaaaccccgtctctactaaaaaa-aaaaaaaaattatctgggcatggtggcccatgcctgtagtcccagctaatcag-gaggctgagacaggagaatcgttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103319705 1363 - 192460366 taatttttgtatttttagtagagacagggtttcaccatgttggccaagctggtcttgaacacctgacctcaggtgatccacccagctcagcctcccaaaatactgagattacaggcgtgagccaccgcgcctgaccAAATTTATGTAATCTTTCTACCAGCCTTATGAAGTaggtccactatctgctaacatcaa-ttccacaatccaaaactctcccaatctaaagattttcataacttatttggcagcaaaatttgagtttaactgacatctttattgatccgaactgacattctatctt-----------------tgtgaatatgtgtatgtttcactgcagaaacgccatgtttgattgcagggtactgccccagatctcaccagggacgtt-aaaaacataggacacaggcaaagtgctgccttttataaaatgcagaacttctgaattctgaaacatacgtgatcccaagggtttgggataagagattgtATAAAACctgtcaatattctcattttacagatgaggaagctgaaggataagtaatttccccaaggtcatataggtagtaagtaagaaagccacaatatgaacccaggaagtttggccctgcagtctatgcAGCATTGCATCTAAGCTATTCTCCACTTTAGAAAGATGTCTACAGTTGCTATTAAGACAATAGATGGAGAAAAAGAAATAGAGAAGAATGCCATGGCAGTCAACCAGACATA-----------GGGATGGAAGGGAATGGAGAGTTAAGAGATGTTTAACGGAAAATTGACTGAGCCTGGTGGTTGTAAGCTGGCTGGGAGAGGTTGGGCATCACACGCagataagtaaaggacacatggggttctggcttcacaactggggaggccggatggcgggtcactcagtgatgcagggaacagaagagggaggggagggagaagaaggtcatgaattctgtattccatgtcacatgtttaagttgggatgtcaactaggtaagtgtctatacatgactggtgcttgagaaagaggcctgggatcaaggtaaagagttgggaattgctagatgcaggtggtcattaagacatgagcatggactgagtggtgacacaaaggtctaagttagaacgtgaaagaaCCCCAACCCTGAAGGGTAGGGAAGTAGAGAGGAAGAGAATGCCAGAggctgggcacggtggcgcacacctgtaatcccagcactttggaaggccgagatgggaggatcacctgaagtcaggagttcaagaccagtctgaccaacatggcaaaaccccatctctact-aaaaa-aaaaaaaaattagctgggcatggtggcccatgcctgtagtcccagctaatcag-gaggctgagacaggagaatcgttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101113161 1364 + 187378091 taatttttgtatttttagtagagacagggtttcaccatgttggccaagctggtcttgaacacctgacctcaggtgatccacccggctcagcctcccaaaatactgagattacaggcgtgagccaccgcgcctgaccaaaTTTATGTAATCTTTCTACCAGCCTTATGAAGTAGGTCCACTATCTGCTAACATCAA-TTCCACAATCCAAAACTCTCCCAATCTAAAGATTTTCATAACTTATTTGGCAGCAAAATGTGAGCTGAACTGACATCTTTATTGATCCGAACTGACATTCTATctt-----------------tgtgaatgtgtgtatgtttcACTGCAGAAACGCCATGTTTGATTGCAGGGTACTGCCCCAGATCTCACCAGGGACGTT-AAAAACATGGGACACAGGCAAAGTGCTGCCTTTTATAAAATGCAGAACTTCTGAATTCTGAAACATACGTGATCCCAAGGGTTTGGGATAAGAGATTATATAAAACCTGtcaatattctcattttacaaatgaggaagctgaaggaTAAGTAATTTCCCCAAGTTCATATAGGTAGTAAGTAAGAAAGCCACAATATGAACCCAGGAAGTTTGGCCCTGCAGTCTATGCAGCATTGCATCTAAGCTATTCTCCACTTTAGAAAGATGTCTACAGTTGCTATTAAgacaatagatggagaaaaagaaataaagaagaatgcCATGGCAGTCAACCAGACATA-----------GGGATGGAAGGGAATGGAGAGTTAAGAGATGTTTAATGGAAAATCGACTGAGCCTGGTGGTTGTAAGCTGGCTGGGAGAGGTTGGGCATCATACGCAGATAAGTAAACGACACATGGGGTTCTGGGTTCAGCACTGGGGAGGCCGGATGGGGGGTCACTCAGTGATGCAGGGAGcagaagagggaggggagggagaagaagatCATGAATTCTGTATTCCATGTCACATGTTTAAGTTGGGATGTCAACTAGGTAAGTGGCTATACATGGCTGGTGCTTGAGAAAGAGGCCTGGGATCAAGATAAAGAGTTGGGAATTGCTAGATGCAGGTGGTCATTAAGACATGAGCATGGACTGAGTGGTGACACAAAGGTCTAAGTTAGAACGTGAAAGAACCCCAACCCTGAAGGGTAGGGAAGTAGAGAGGAAGAGAATgccagaggctgggcacggtggcgcacacctgtaatcccagcactttggaaggccgagatgggaggatcacctgaagtcaggagttcaagaccagtctgaccaacatggcaaaaccccgtctctactaaaaaa-aaaaaaaaattagctgggcatggtggcccatgcctgtagtcccagctaatcag-gaggctgagacaggagaatcgttt i papAnu2.chr2 I 316 C 0 s chlSab2.chr15 4975369 1362 + 91754291 taatttttgtatttttagtagagacagggtttcaccatgttggccaagctggtcttgaacacctgacctcaggtgatccacctggctcagcctcccaaaatactgagattacaggcgtgagccaccgcgcctgaccAAATTTATGTAATCTTTCTACCAGCCTTATGAAGTaggtccactatctgctaacatcaa-ttccacaatccaaaactctcccaatctaaagattttcataacttatttggcagcaaaatttgagctgaactgacatctttattgatccgaactgacattctatctt-----------------tgtgaatatgtgtatgtttcactgcagaaacgccatgtttgattgcagggtactgccccaggtctcaccagggatgtt-aaaaacataggacacaggcaaagtgctgccttttataaaatgcagaacttctgaattctgaaacatacatgatcccaagggtttgggataagagattgtATAAAACctgtcaatattctcattttacagatgaggaagctgaagaataagtaatttccccaaggtcatataggtagtaagtaagaaagccacaacacgaacccaggaagtttggccctgcagtctatgctgcattgtatctaagctattctCCACTTTAGAAAGATGTCCACAGTTGCTATTAAGACAATAGATGGAGAAAAAGAAATAAAGAAGAATGCCATGGCAGTCAACCAGACACA-----------GGGATGGAAGGGAATGGAGAGTTAAGAGATGTTTAACGGAAAATTGACTGAGCCTGGTGGTTGTAAGCTGGCTGGGAGAGGTTGGGCATCACACGCagataagtaaaggacacatggggttctgggttcagcactggggaggccggatggcgggtcactcagtgatgcagggaacagaagagggaggggagggagaagaagatcatgaattctgtattccatgtcacatgtttaagttgggatgtcaactaggtaagtggctatacatggctagtgcttgagaaagaggcctgggatcaagataaagagttgggaattgctagatgcaggcggtcattaagacatgagcatggactgagtgatgacac-aaggtctgagttagaatgtgaaagagCCCCAACCCTGAAGGGTAGGGAAGTAGAGAGGAAGAGAATGCCAGAggctgggcacggtggcgcacacctgtaatcccagcactttggaaggccgagatgggaggatcacctgaagtcgggagtttaagaccagtctgaccaacatggcgaaaccccgtctctact--aaaa-agacaaaaattaaccaggcatggtgacgcgtgcctgtaatcccagctactaggcggggctgaggcaggaggatcactt i chlSab2.chr15 C 0 I 1963 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=169365.000000 s hg38.chr3_KI270781v1_alt 95889 90 + 113034 gaacccaagaggtgaaggttgcagtgagctgagattgcaccactgcactccagcctgggccacagagcgagactctgtctagaaaaaaaa s panTro4.chr3 13845310 90 - 202329955 gaacccaagaggtgaaggttgcagtgagctgagattgcaccactgcactccagcctgggccacagagcgagactctgtctagaaaaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14380613 90 - 123690457 gaacccaagaggtgaaggtttcagtgagctgagattgcaccactgcactccagcctgggccacagagcaagactctgtcaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103676367 90 + 192599291 gaacccaagaggtgaaggttgcagtgagctgagattgcaccactgcagtccagcctgggccacagagtgagactctgtcaaaaaaaaaaa i rheMac3.chr2 C 0 I 16 s macFas5.chr2 103321068 90 - 192460366 gaacccaagaggtgaaggttgcagtgagctgagattgcaccactgcagtccagcctgggccacagagtgagactctgtcaaaaaaaaaaa i macFas5.chr2 C 0 I 111 s papAnu2.chr2 101114525 90 + 187378091 gaacccaagaggtgaaggttgcagtgagctgagattgcaccactacagtccagcctgggccacagagtgagactctgtcaaaaaaaaaaa i papAnu2.chr2 C 0 I 14 s chlSab2.chr15 4978694 90 + 91754291 gaacccaagaggtgaaggttgcagtgagctgagattgcatcactgcagtccagcctgggccacagagtgagactctgtcaaaaaaaaaaa i chlSab2.chr15 I 1963 I 9 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=746225.000000 s hg38.chr3_KI270781v1_alt 95979 397 + 113034 a---agaagagaaTGCAAGAGAC---------TGGAAAGAGACTGCTTCAA---GAAGGGAAAAGTCCTCAGTGCT-GGTGctccctccctcctgccctctcctccACGAGACAGGCGAGCCCAGGAACTATGGATGGGAGCTCATTCCAgggactggtaagaactggtcctagcatttcccagtgccatagagcccaggaaccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataacgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcatcctccctggatttgtggtgagagctcaaaaggttgctctaattatcattTTTTTTATTATGTACGAGGTggtgaagag s panTro4.chr3 13845400 400 - 202329955 aaagagaagagaatgcaagagac---------tggaaagagactgcttcaa---gaagggaaaagTCCTCAGTGCT-GGTGCTCCCTCCCTCCTGCCCTCTCCTCCACGAGACAGGCGAGCCCAGGAACTATGGATGGGAGCTCATTCCAGGGACTGGTAAGAACTGGTCCTAGCATTTCCCAGTGCCACAGAGCCCAGGAAccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataacgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcatcctccctggatttgtggtgagagctcaaaaggttgctctaattatcattTATTTTATTATgtacgaggtggtgaagag i panTro4.chr3 C 0 I 847 s nomLeu3.chr11 14380703 398 - 123690457 aa--agaagagaatgcaagagac---------tggaaagagactgcttcaa---gaagggaaaagTCCTCAGTGCT-GGTGctccctccctcctgccctctcctccACGAGACAGGCGATCCCAGGAACTATGGATGGGAGCTCATTCCAGGGACTGGTAAGAACTGGTCCTAGCATTTCCCAGTGCCACAGAGCCCAGGAAccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataatgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcatcctccctggatttgtggtgagagctcaaaaggttgctctaattatCCTTTATTTTATTATGTACGAGGTggtgaagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103676473 410 + 192599291 ---aagaagagaatgcaagagactggaaagagtggaaagagactgcttcaagaggaaggaaAAAGTCCTCAATGCCGGGTGCTCCCTTCCTCCTGCCCGCTCCTCCACGAGACAGGCGATCCCAGGAACTGTGAATGGGAGCTCATTCCAGGGACTGGTAAGAACTGGTCCTAGCATTTCCCAGTGCCACAGAGCCCAGAAAccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataatgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcatcctccctggatttgtggtgagacctcaaaaggttgctctaattatcattTATTTTATTATGTATGAGGTggtgaagag i rheMac3.chr2 I 16 C 0 s macFas5.chr2 103321269 410 - 192460366 ---AAGAAGAGAATGCAAGAGACTGGAAAGAGTGGAAAGAGACTGCTTCAAGAGGAAGGAAAAAGTCCTCAATGCCGGGTGCTCCCTTCCTCCTGCCCGCTCCTCCACGAGACAGGCGATCCCAGGAACTGTGGATGGGAGCTCATTCCAgggactggtaagaactggtcctagcatttcccagtgccacagagcccagaaaccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataatgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcatcctccctagatttgtggtgagacctcaaaaggttgctctaattatCATTTATTTTATTATGTATGAGGTggtgaagag i macFas5.chr2 I 111 C 0 s papAnu2.chr2 101114629 410 + 187378091 ---aagaagagaatgcaagagactggaaagagtggaaagagactgcttcaagaggaaggaaaaagtccTCAATGCCCGgtgctccctccctcctgcccgcTCCTCCATGAGACAGGCGATCCCAGGAACTGTGGATGGGAGCTCATTCCAGGGACTGGTAAGAACTGGTCCTAGCATTTCCCAGTGCCGCAGAGCCCAGAAACCAGCTCTGCCTGGTGCCCATCAGCAACGTAACCACCTCTGGGCTCCAGTTTCTACATCTAGCAACTGGAATAATAATGTCCATCTCATAGGCTTGTTGTGAGTATTAAATATACAAACAGAGAAGTCAGCATCCTCCCTGGATTTGTGGTGAGACCTCAAAAGGTTGCtctaattatcatttattttattatgtataaggTGGTGAAGAG i papAnu2.chr2 I 14 C 0 s chlSab2.chr15 4978793 410 + 91754291 ---AAGAAGACAATGCAAGAGACTGGAAAGAGTGGAAAGAGACTGCTTCAAGAGGAAGGAAAAAGTCCTCAATGCCGGGTGCTCCCTCCCTTCTGCCCGCTCCTCCACGAGACAGGCGATCCCAGGAACTGTGGATGGGAGCTCATTCCAgggactggtaagaactggtcctagcatttcccagtgccacagagcccagaaaccagctctgcctggtgcccatcagcaacgtaaccacctctgggctccagtttctacatctagcaactggaataataatgtccatctcataggcttgttgtgagtattaaatatacaaacagagaagtcagcaacctccctggatttgtggtgagacctcaaaaggttgctctaattatCATTTATTTTATTATGTATGAGGTggtgaagag i chlSab2.chr15 I 9 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=120411.000000 s hg38.chr3_KI270781v1_alt 96376 87 + 113034 tgggtggtgagggcatttcaggcagaaagaacaccattagcaaaggtgtggcaagacagcgcgtgttcagagaagagacctgttggg s nomLeu3.chr11 14381101 87 - 123690457 tgggtggtgagagcatttcaggcagaaagaacaccattagcaaaggtgtggcaagacagcgcgtgttcagagaagagacctgttggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103676883 87 + 192599291 tgggtggtgagggcatttcaggcagaaagaacaccattagcaaaggtgtggcaagacggcgtgtgttcagagaagagacctgttggg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103321679 87 - 192460366 tgggtggtgagggcatttcaggcagaaagaacaccattagcaaaggtgtggcaagacggcgtgtgttcagagaagagACCTGTTGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101115039 87 + 187378091 TGGGTGGTGAGGGCATTTCAGGCAGAAAGAACACCATTAGCAAAGGTGTGGCAAGATGGCGTGTGTTCAGAGAAGAGACCTGTTGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4979203 87 + 91754291 cgggtggtgagggcatttcaggcagaaagaacaccattagcaaaggtgtggcaagacggcgtgtgttcagagaagagACCTGCTGGG i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13845800 847 - 202329955 I a score=1520785.000000 s hg38.chr3_KI270781v1_alt 96463 841 + 113034 tggaggatgtgtg-ggtggaattgtggggcctgggagcaggacggataatgaggcTCAGCAACCTCTCCTGCTCCGTTCCGTGTGTCACATGTTGTGGGGTCTGCATCACCTAATCAGGCGTTTTCTTTAGAAATGCCCACCACACCTTTGCTCCTCACCAGCCCTCACCTGCTACAGTGTGG-AACTGTCTCTAATCACCTCCCACTGCTGCGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCCTCCTAATGGATCTTCCTGTGCCGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTATGGAACATCAATATGGATAGGCTGCCTCCTGCTCACAGCCCTTCCGCGTGGCCCATCGCCTTGGAACAGAGTGCATTTCCACAGCTCTCACAGGCTTCCTTTCCCATCTTTCTCACCCTTTCTTTCCCTCCACAAACTCACACACTGCTCTAGAGTCTAGACGACAAAGCCAACTGCCTTTACCAAGTGTACCACAGACTTGTTTCTGGGCCTTTGCACATGCCAGCCCAACCCCTATCTTTCTTACCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGGCCCCAGGACAAACCTTGATGCCAGAACATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCTCAGTGCCCCAGTGCTAAGCCATGAGCCCCTTGCCTGGCTCTTAATAGAGGCTCAGCAGCAATGTGTGGAGGGACTGAGATTACAGAGAAAGGGCCAGAGCATGGGGAGCCTTAAAGGATATGCTAGGGGCTTAGTTTATGGGGAAACCACGGAAGATGTGGGGGCAATGAACTGGCA s panTro4.chr3 13846647 843 - 202329955 TGGAGGATGTGTGTGGTGGAATTGTGGGGCCTGGGAGCAGGATGGATAATGAGGCTCAGCAATCTCCCCTGCTCCGTTCCGTGTGTCACATGTTGTGGGATCTGCACCACCTAATCAGGCGTTCTCTTTAGAAATGCCCACCACACCTTTGCTCCTCACCAGCCCTCACNTGCTACAGTGTGGGAACTGTCTCTAATCACCTCCCACTGCTGCGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCCTCCTAATGGATCTTCCTGTGCCGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTATGGAACACCAATATGGATAGGCTGCCTTCTGCTCACAGCCCTTCTGCATGGACCATCGCCTTGGAACAGAGTGCATTTCCACAGCTCTCGCAGGCTTCCTTTCCCACCTTTCTCACCCTTTCTTTCCCTCCACAAACTCACACACTGCTCTAGAGTCTAGACGACAAAGCCAACTGCCTTTACCAAGTGTACCACAGACTTGTTTCTGGGCCTTTGCACATGCCAGCCCAACCCCTATCTTTCTTACCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGGCCCCAGGACAAACCTTGATGCCAGAACATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCTCAGTGCCCCAGTGCTAAGCCATGAGCCCCTTGCCTGGCTCTTAATAGAGGCTCAGCAGCAATGTGTGGAGGGACTGAGATTACAGAGAAAGGGCCAGAGCATGGGGAGCCTTAAAGGATATGCTAGGGGCTTAGTTTATGGGGAAACCACGGAAGATGTGGGGGCAATGAACTGGCA i panTro4.chr3 I 847 C 0 s nomLeu3.chr11 14381188 842 - 123690457 tggaggaggcgtg-ggtgggattgtggggcctgggagcaggacggataatgaggcTCAGCAACTTCCCCTGCTCCGTTCCCTGTGTCACATGTTGTGGGATCTGCACCGCCTAATCAGGCGTTCTCTTTAGAAATGCCCGCCACACCTTTGCTCCTCACCAGCCCTCACCTGCTACAGTGTGGGAACTGTCTCTAATCACCTCCCACTGCTGAGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCCTCCTAATGGATCTTCCTGTGCCATCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTGTGGAACGCCAACATGGATAGGCTGCCTCCCGCTTACAGCCCTTCCGCATGGCCTGTCGCCTTGGAACAGAGTGCACTTCCACAGCTCTCACAGGCTTCCTTTCCCGTATTTCTCACCCCTTCTTTCCCTCCACAAACTCACGCGCTGCTCTAGAGTCTAGACGACAAAGCCAACTGCCTTTCCCAAGTGTGCCACAGACTCGTTTCTGGGCCTTTGCACATGCCAGCCCAACCCCTAGCTTTCTTCCCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGGCCCCAGGACAAACCTTGATGCCGGAACATTCCACATGGTATTGCACCATTTGCTCCAGAGGTGTCTCAGTGCCCCACTGCTAGGCCGTGAGTCCCTTGCCTGGCTCTTAATAGAGGCTCAGTAGCAATGTGTGGAGGGACTGAGATTACAGAGAAAGGGCCGGAGCATGGGGAGCCTTAAAGGATATGCTAGGGGCTTAGGTTACGGGAAAACCACCGAAGATGTGGGGGCCATGAACTGGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103676970 836 + 192599291 tgaagggtgtgtg-ggtggga-TGTGGGGCCTGGAAGCAAGATGGACAATGAGGCTCAACAACCTCCCCCGCTCTGTTCCCTGTGTCACATGTTGTGGGATCCGCACCACCTAATCA-GCATTCTCTTTAGAAATGCCTGCCACACCTTTGCTCCTCACCAACCCTTGCCTGCTACTGTGTAGGAACAGTCTCTAATCACCTCCCACTGCTGAGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCTTCCTAATGGATCTTCCTGTGCTGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTGTGGAACACCAACGTGGGCAGGCTGCCTCCTGCTTACAACACTTCCGCATGGCCCATCGCCTTGGAACAGAGTGCATTTCCACAGCCCTCACAGGCTTCCTTTCCCGTCTTTCTCAGCCTTGCTTTCCCTCCACAAACTCACACACTGCTCTAGGGTCTAGGCGACAAAGCCACCTGCCTTTACCAAGTGTGCCACAGACTTGTTTCCGGGCCTTTGCACATGCCAGCCCAA---CTAGCTTTCTTCCCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGGCCCCAGGACAAACCTTGATGCCACAATATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCGCAGTGCCCCACTGCTAGGCCATGAGCCCCTTGCCTGGCTCTTAATAGAGGCTCAGTAGCAATGCGTGGAGGGACTGAGATTACAGAGAAAGGGCCAGAGCAT-GGGAGCCTTAAAGGACATGCTAGGGGCTTAGGTTACGGGAAAACCACCGAAGATGTGGGGGCCATGAACTGGCA i rheMac3.chr2 C 0 I 110 s macFas5.chr2 103321766 836 - 192460366 TGAAGGGTGTGTG-GGTGGGA-TGTGGGGCCTGGAAGCAAGATGGACAATGAGGCTCAACAACCTCCCCCGCTCTGTTCCCTGTGTCACATGTTGTGGGATCCGCACCACCTAATCA-GCATTCTCTTTAGAAATGCCTGCCACACCTTTGCTCCTCACCAACCCTTGCCTGCTACTGTGTAGGAACGGTCTCTAATCACCTCCCACTGCTGAGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCTTCCTAATGGATCTTCCTGTGCTGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTGTGGAACACCAACGTGGGCAGGCTGCCTCCTGCTTACAACACTTCCGCATGGCCCATCGCCTTGGAACAGAGTGCATTTCCACAGCCCTCACAGGCTTCCTTTCCCGTCTTTCTCAGCCTTGCTTTCCCTCCACAAACTCACACACTGCTCTAGGGTCTAGGCGACAAAGCCACCTGCCTTTACCAAGTGTGCCACAGACTTGTTTCCGGGCCTTTGCACATGCCAGCCCAA---CTAGCTTTCTTCCCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGGCCCCAGGACAAACCTTGATGCCACAATATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCTCAGTGCCCCACTGCTAGGCCATGAGCCCCTTGCCTGGCTCTTAATAGAGGCTCAGTAGCAATGCATGGAGGGACTGAGATTACAGAGAAAGGGCCAGAGCAT-GGGAGCCTTAAAGGACATGCTAGGGGCTTAGGTTACGGGAAAACCACCGAAGATGTGGGGGCCATGAACTGGCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101115126 836 + 187378091 TGAAGGGTGTGTG-GGTGGGA-TGTGGGGCCTGGGAGCAAGATGGACAATGAGGCTCAACAACCTCCCCCGCTCTGTTCCCTGTGTCACATGTTGTGGGATCCGCACCACCTAATCA-GCATTCTCTTTAGAAATGCCTGCCACACCTTTGCTCCTCACCAACCCTTGCCTGCTACTGTGCAGGAACGGTctctaatcacctcccactgcTGAGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCTTCCTAATGGATCTTCCTGTGCTGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTGTGGAACGCCAACGTGGGCAGGCTGCCTCCTGCTTACAACACTTCCACATGGCCCATCGCCTTGGAACAGAGTGCATTTCCACAGCCCTCACAGGCTTCCTTTCCCGTCTTTCTCACCCTTTCTTTCCCTCTACAAACTCACACACTGCTCTAGGGTCTAGGCGACAAAGCCACCTGCCTTTACCAAGTGTGCCACAGACTTGTTTCTGAGCCTTTGCACATGCCAGCCCAA---CTAGCTTTCTTCCCCTAGACCTAGTCCACTCCCGTCTCAGTGCCACCTGGCCCCAGGACAAACCTTGATGCCAGAATATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCTCAGTGCCTCACTGCTAGGCCATGAGCCCCTTGCCTGGCTCTTAATAGAGGCTCAGTAGCAATGCGTGGAGGGACTGAGATTACAGAGAAAGGGCCAGAGCAT-GGGAGCCTTAAAGGACATGCTAGGGGCTTAGGTTATGGGAAAACCACCGATGATGTGGGGGCCATGAACTGGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4979290 836 + 91754291 TGAAGGGTGTGTG-GGTGGGA-TGTGGGGCCTGGGAGCAAGATGGACAATGAGGCTCAACAACCTCCCCCGCTCTGTTCCCTGTGTCACATGTTGTGGGATCCGCACCACCTAATCA-GCATTCTCTTTAGAAATGCCTGCTACACCTTTGCTCCTCACCAACCCTTGCCTACTACTGTGTAGGAACGGTCTCTCATCACCTCCCACTGCTGAGGGAAGCACAGGTCCTCGTCACCACCTGCCTGCACAGAACAAGCTTCCTAATGGATCTTCCTGTGCTGTCTTTCCTCCAGCACAGGCCCCAGGGCCATCTCTGTGGAACGCCAACGTGGGCAGGCTGCCTTCTGCTTACAACACTTCCGCATGGCCCATCGCCTTGGAACAGAGTGCATTTCCACAGCCCTCACAGGCTTCCTTTCCCGTCTTTCTCACCCTTTCTTTCCCTCCACAAACTCACACACTGCTCTAGGGTCTAGGCGACAAAGCCACCTGCCTTTACCAAGTGTGCCACAGACTTGTTTCTGAGCCTTTGCACATGCCAGCCCAA---CTAGCTTTCTTCCCCTAGACCTAGTCCACTCCCGTCTCAGTGCCATCTGACCCCAGGACAAACCTTGATGCCAGAATATTCCACATGGTATTGTACCATTTGCTCCAGAGGTGTCTCAGTGCCCCACTGCTAGGCCATGAGCCCCTTGCCTGGCTCTTAATAGCGGCTCAATAGCAATGCATGGAGGGACTCAGATTACAGAGAAAGGGCCAGAGCAT-GGGAGCCTTAAAGGACATGCTAGGGGCTTAGGTTACAGGAAAACCACCGAAGATGTGGGGGCCATGAACTGGCA i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=9332.000000 s hg38.chr3_KI270781v1_alt 97304 22 + 113034 AACTGAGGTGTTTTAGGGACAT s panTro4.chr3 13847490 22 - 202329955 AACTGAGGTGTTTTAGGGACAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14382030 22 - 123690457 TCCTGAGGTGTTTTAGGGACAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103322602 15 - 192460366 TCCTGACATGAT-------CAT i macFas5.chr2 C 0 I 1 s papAnu2.chr2 101115962 15 + 187378091 TCCTGACATGAT-------CAT i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 4980126 15 + 91754291 TCCTGACATGAT-------CAT i chlSab2.chr15 C 0 I 1 e ponAbe2.chr3 13825436 11466 - 202140232 I e rheMac3.chr2 103677806 110 + 192599291 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=73481.000000 s hg38.chr3_KI270781v1_alt 97326 40 + 113034 GATCATGGGGGGAAGGAGAGTGGAGGGGATGTGCTCAGGA s panTro4.chr3 13847512 40 - 202329955 GATCATGGGGGGAAGGAGAGTGGAGGGGATGTGCCCAGGA i panTro4.chr3 C 0 I 27 s nomLeu3.chr11 14382052 40 - 123690457 GATCATTGGGGGAAGGAGGGTGGAGGGGACGTGCCCAGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103677916 40 + 192599291 GATCATGTGGGGAAGGAGGGTGGAGGGGACGTGCCCAGGA i rheMac3.chr2 I 110 C 0 s macFas5.chr2 103322618 40 - 192460366 GATCATGTGGGGAAGGAGGGTGGAGGGGACGTGCCCAGGA i macFas5.chr2 I 1 C 0 s papAnu2.chr2 101115978 40 + 187378091 GATCATGTGGGGAAGGAGGGTGGAGGGGACGTGCCCAGGA i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 4980142 40 + 91754291 GATCATGTGGGGAAGGAGGGTGGAGGGGACGTGCCCAGGA i chlSab2.chr15 I 1 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=231231.000000 s hg38.chr3_KI270781v1_alt 97366 184 + 113034 TGGTGGGACTTCTCCACCTCCAGAGGAAAAAGAGAGGCCAGAGAACAGCAGATACCTGCTAGATCAGATTGCGGTGACTGGAGAGAAGGATTGATCTCCACCACCCTTAACAACGACCAACTGAGGATATTTGCTCCTGTACTGCAAGATCAGAGCCAAGCCCTGCAGGTGGTAGGGGTGGGAT s nomLeu3.chr11 14382092 177 - 123690457 TGGTGGGACTTCTCCACCTCCAGAGGAAAAAGAGAGGCCAGAGAACAGCAGACACCTGCTAGATCAGATCGCAGTGACTGGAGAGA-------ATCTCCACCACCCTTAACAACGACCGACTGAGAATATCTGCTCCTGTACTGCAAGATCAGAGCCAAGCCCTGCAGGTGGTAGGGGCAGGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103677956 184 + 192599291 TGGTGGGGCTTCTCCACCTCCAGAGGAAAAAGAGAGGCCGGAGAACAGCAGTTGCCTGCTAGATCAGATTGTGATGACTGGAGAGAAGGATTGACCTCCACCACCCTTAACAATGACTAACTGAGAATATCTGCTCCTGTACTGCAAGATCAGATCCAAGCCCTGCAGGTGGTAGCAGTGGGAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103322658 184 - 192460366 TGGTGGGACTTCTCCACCTCCAGAGGAAAAAGAGAGGCCGGAGAACAGCAGTTGCCTGCTAGATCAGATTGCGATGACTGGAGAGAAGGATTGACCTCCACCACCCTTAACAATGACCAGCTGAGAATATCTGCTCCTGTACTGCAAGATCAGATCCAAGCCCTGCAGGTGGTAGCAGTGGGAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101116018 184 + 187378091 TGGTGGGACTTCTCCACCttcagaggaaaaagagaggCCGGAGATCAGCAGATGCCTGCTAGATCAGATTGCAATGACCGGAGAGAAGGATAGACCTCCACCACCCTTAACAATGACTGACTGAGAATATCTGCTCCTGTACTGCAAGATCAGAGCCAAGCCCTGCAGGTGGTAGCAGCGGGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4980182 184 + 91754291 TGGTGGGACTTCTCCACCTCCAGAGGAAAAAGAGAGGCTGGAGAACAGCAGATGCCTGCTAGATCAGATTGCATTGACCAGAGAGAAGGATTGACCTCCACCACCCTTAACAATGACCGACTGAGAATATCTGCTCCTGTACTGCAAGATCAGATCCAAGCCCTGCAGGTGGTAGCAGTGGGAT i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 17271383 102 + 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13847552 27 - 202329955 I a score=158406.000000 s hg38.chr3_KI270781v1_alt 97550 131 + 113034 GGGGgagtcaattcaacggagggatgtttccaagggtcttccagaatctgctcctggc---tctgttatgccttcaagcc-ccctccactt-tgcctgcc--ctctctcactaccgtcatcggagggtgccta-ctgcc s nomLeu3.chr11 14382269 131 - 123690457 GGGGgagtcaattcaatggagggatgtttccaagggtcttccagaatctgctcctggc---tctgttatgccttcaagcc-ccctccactt-tgcctgcc--ctctctcactaccgtcattggagggggccca-ctgcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103678140 132 + 192599291 GGGGGAGTCAATTCAATGGAGGGATTTTTCCAGGGGTCTATCagaatccacccctggc---tcta-tatgtcttcaagccaccccccactt-tgcctgcc--ctctctcactaccgtcatcggagggtgctcacctgcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103322842 132 - 192460366 GGGGGAGTCAATTCAATGGAGGGATTTTTCCAGGGGTCTATCAGAATCCACCCCTGGC---TCTA-TATGTCTTCAAGCTACCCCCCACTT-TGCCTGCC--CTCTCTCACTACCGTCATCGGAGGGTGCTCACCTGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101116202 134 + 187378091 GGGGGAGTCAATTCAATGGAGGGATTTTTCCAGGGGTCTATCAGAATCCACCCCTGGC---TCTA-TATGTCTTCAAGCCCCCCGCCACTT-TGCCTGCCCTCTCTCTCACTACCGTCATCGGAGGGTGCTCACCTGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4980366 134 + 91754291 GGGGGAGTCAATTCAATGGAGGGATTTTTCCAGGGGTCTATCAGAATCCACCCCTGGC---TCTA-TATGTCTTCAAGCCCCCGGCCACTT-TGCCTGCCCTCTCTCTCACTACCGTCATCGGAGGGTGCTCACCTGCC i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24818981 98 - 42124431 ggaggcctcaggtccatggaga----tctcccaaggtccaccaGAGCCGCCTCCTGGCTGGTTTT-CACCCCCTGCAGGTCCCCCCCACTTCTGCCTGCC------------ACC------------------------ i canFam3.chr34 I 47906 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13847552 27 - 202329955 I a score=1124316.000000 s hg38.chr3_KI270781v1_alt 97681 612 + 113034 ttcctttgctttctcccactcactcattagctcatctccatct------ggctttggcctcacccctccagtgaggcagctctcacaggtcaccagcagcctcggatgttgtccttgtgacctttcctcagga-ctgacagatcacctctctgtagtctttatccttcctctctcctcttcccctctctgagactcctgttacctctccaatcaccccttgccactgatttctcattgtatcccaaccccttaagaacaggtaatttcctaaattctgcccttggctggtttttcctctctctgtgcacacattctctgaatatcttttgtcctaccatgcttcaagttttcatttattattcaaatgagtcccaaatctatgtatctagacgtaagctttctctccaagcctgagattcacagatGGTGGACTATAAATGAGATACATCCt--------tttttttttttttttttttt----agaccaagtcttgctctgttgcccaggctggaatgcagtggcacgatcttggctcactgaaacctctgcctcctgtgttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgctcggcta s panTro4.chr3 13847579 616 - 202329955 ttcctttgctttctcccactcactcattagctcaactct-tctatactaggctttggcctcacccctccagtgaggcagctctcacaggtcaccagcagcctcggatgttgtccttgtgacctttcctcagga-ctgacatatcacctctctgtagtctttatccttcctctctcctcttcccctctctgagtctcctgttacctctccaatcaccccttgccactgatttctcattgtatcccaaccccttaagaacaggtaatttcctaaattctgcccttggctggtttttcctctctctgtgcacacattctctgaatatcttttatcctaccatgcttcaagttttcatttattattcaaatgagtcccaaatctatgtgtctagacgtaagctttctctccaagcctgagattcacagatGGTGGACTATAAATGAGATATATCCt--------tttttttttttttttttta-----agaccaagtcttgctctgttgcccaggctggaatgcagtggcacgatcttggctcactgaaacctctgcctcctgtgttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccatgctcggcta i panTro4.chr3 I 27 C 0 s nomLeu3.chr11 14382400 611 - 123690457 tgcctttgctttctcccactcactcattagctcatctccatct------ggctttggcctcacccctccagtgaggcagctctcacaggtcaccagcagcctcgggtgttgtcc-tgtgacctttcctcagaa-ctgacatatcacctctctgtagtctttatccttcctctct-ctctccccttctctgagtctcctgttacctctccaatcaccccttgccactgatttctcattgtatcccaaccccttaagaacaggtaatttcctaaattctgctcttggctggtttttcctctctctgtgcacacattctctgaatatcttttatcctaccatgcttcaagttttcatttattattcaaatgattgccaaatctatgtatctggacgtaagctttctctccaagcctgagattcacagatGGTGGACTATAAATTAGATATAttct--------ttctttttcttttttttttt---gagaccgagtcttgctctgttgcccaggctggaatgcaatggcacgatctcggctcactgcaacttctgcctcctgtgttcaagcaattctcctgcctcaacctctccagtagctgggattacagacgcacaccgccatgcccagcta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103678272 620 + 192599291 tgccttcgctttctcccactcactccttacctcatctccatat------ggctttgacctcatccctccagtgaggcagctcttgaaggtcaacagcagcttcaggtgttgtccttgtgaccttttctcaggg-ttgacatatcacctctctgtagtctttatccttcttctctcctctccctctctctgagtctactgttacctctccaatcaccccttg-cactggtttctcattgtatgccaaccccttcagaacaggtaattttctaaattctgcccttggctggcttttcctctctctgtgcacacattctctgaatatcttttatcttaccacacttcaagttctcatttattattcaaatgattcccaaatctatgtatctagacataagctttctctccaagcttgagattcacagatGGTGGACCATAAATGAGATATATTTC---ttttttttttttctttttttttttttttgagaccaagtcttgctctgttgcccaggctggaatgcagtggcacgatctcggctcactgcaacctctgcctcctgtgttcaagcaatactcctgcctcaacctctccagtagctgggattacaggcatgcaccacgatgcccagcta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103322974 623 - 192460366 TGCCTTCGCTTTCTCCCACTCACTCCTTACCTCATCTCCATAT------GGCTTTGACCTCATCCCTCCAGTGAGGCAGCTCTTGAAGGTCAACAGCAGCTTCAGGTGTTGTCCTTGTGACCTTTTCTCAGGG-TTGACatatcacctctctgtagtctttatccttcttctctcctctccctctctctgagtctactgttacctctccaattaccccttg-cactggtttctcattgtatgccaaccccttcagaacaggtaatttcctaaattctgcccttggctggcttttcctctctctgtgcacacattctctgaatatcttttatcttaccacacttcaagttctcatttattattcaaatgattcccaaatctatgtatctagacataagctttctctccaagcttgagattcacagatGGTGGACCATAAATGAGATATATTTCtttttttttttttttttttttttttttttttgagaccaagtcttgctctgttgcccaggctggaatgcagtggcacgatctcggctcactgcaacctctgcctcctgtgttcaagcaatactcctgcctcaacctctccagtagctgggattacaggcatgcaccacgatgcccagcta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101116336 615 + 187378091 TGCCTTCGCTTTCTCCCACTCACTCCTTAGCTCATCTCCATAT------GGCTTTGACCTCACCCCTCCAGTGAGGCAGCTCTTGAAGGTCAACAGCAGCTTCAGGTGTTGTCCTTGTGACCTTTTCTCAGGG-TTGACATATCAcctctctgtagtctttatccttcttctctcctctccctctctctgagtctactgttacctctccAATCACCCCTTG-CACTGGTTTCTCATTGTATGCCAACCCCTTCAGAACAGGTAATTTCCTAAATTCTGCCCTTGGCTGGCTTTTCCTCTCTCTGTGCACACATTCTCTGAATATCTTTTATCTTACCACGCTTCAAGTTCTCATTTATTATTCAAATGATTCCCAAATCTATGTATCTAGACATAAGCTTTCTCTCCAAGCTTGAGATTCACAGATGGTGGACCATAAAtgagatatatttc--------ttttttttttctttttttttttggagaccaagtcttgctctgttgcccaggctggaatgcagtggcacgatctcggctcactacaacctctgcctcctgtgttcaagcaatactcctgcctcaacctctccagtagctgggattacaggcatgcaccaccatgcccagctt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4980500 621 + 91754291 TGCCttcgctttctcccactcactccttagctcatctccatat------ggctttgacctcacccctccagtgaggcagctcttgaaggtcaacagtagcttcAGGTGTTGTCCTTGTGACCTTTTCTCAGGG-TTGACATATCACCTCTCTGTAGTCTTTATCCTTCTTCTCTCCTCTGCCTCTCTCTGAGTCTACTGTTAcctctccaatcaccccttg-cactggtttctcattgtatgccaaccccttcagaacaggtaatttcctaaattctgcccttggctggcttttcctctctctgtgcacacattctctgaatatcttttatcttaccatgcttcaagttctcatttattattcaaatgattcccaaatctatgtatctagacataagctttctctccaagcttgagattcacagatGGTGGACCATAAATGAGATATATTTC--tttctcttttttttttcttttttttttttgagaccaagtcttgctctattgcccaggctggaatgcagtggcacgatctcggctcactgcaacctctgcctcctgtgttcaaacaattctcctgcctcaacctctccagtagctgggattgcaggcatgcaccaccatgcccagcta i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24819079 387 - 42124431 --CCCCAGCGCCCCCCACCGCCCCCCCAGCCCCGCCTCCGGCA------GGCTTTGGCCCTGTCCCTCCAGGGGGGCAGCTCGTGGCGGCCACCAGCAGCCTCAGG-GTTGGCCTTGGGACCTCTTCTCAAGGCCCTTCCTTCCACCCCTCTGCAGTCTTCACCCTTCCTCCCTCCTCTGCCCTTC---GAGTCTCCTTTC---------------------CAGTGGTTCCTTATTTTTTCCCAACTT----------AGTAAGTAGGTAAATTCTCTCCTTGGCTGACTTTCCCTCTCTCTGTGCACAGGTTCC---AGTATCTTTTCCCCTCCCCTACTTCAAGCTTTA---TGTTGATCAAATGACTCCCAGATCTGCAGGGCTAACCCCAAGCTCTCTTTCTCAGCTTGAGATTCACAGATGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGACTA---------- i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T a score=242308.000000 s hg38.chr3_KI270781v1_alt 98293 134 + 113034 atttttatatttttagtagagacaggctttcaccatgttggccaggccagtctcaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggaatataggcatgagccatcgcgcctggcc s panTro4.chr3 13848195 134 - 202329955 atttttatatttttagtagagacaggctttcaccatgttggccaggccagtctcaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggaatataggcatgagccatcgtgcctggcc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14383011 134 - 123690457 atttttttatttttagtggagatgggatttccccatgttggccaggccagtctcaaactcctgacctcaggtgattcactcgccttggcctcccaaagtgctgggaatagaggcgtgagccatcgcgcctggcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103678892 134 + 192599291 atttttgtatttttagtagagacgggatttccccatgttggccaggccagtctcaaactcctgacctcaagtcatccacccgccttggcctcccaaagtgctgggaatgtagatgtgagtcattgcgcctggcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103323597 134 - 192460366 atttttgtatttttagtagagacgggatttccccatgttggccaggccagtctcaaactcctgacctcaagtcatccacccgccttggcctcccaaagtgctgggaatatagatgtgagtcattgcgcctggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101116951 134 + 187378091 atttttgtatttttagtagagacgggatttccccatgttggccaggccagtctcaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggaatatagatGTGAGTcattgcgcctggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4981121 134 + 91754291 atttttgtatttttagtagagacgggatttccccaggttggccaggccagtctcaaactcctgacctcaagtgatccacccgccttggcctcccaaagtgctgggaatacagatgtgagtcattgtgcctggcc i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 24819466 0 - 42124431 C e calJac3.chr15 92439687 13539 - 98464013 T a score=1401971.000000 s hg38.chr3_KI270781v1_alt 98427 702 + 113034 TAAATAAGATATATTCCTAACaaatgaaagaaaagac-tttttta--aagctataactcaaaatcatgaagtggtctcttgatggaccaaaaacggtggagaattcctaaagatgaaatgctggtgaaatgatgataggatctgactgaagaaagaaaacttagtttaaaatgtggatgggagagcACCATGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGCCTCCATAAACCAATACCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGTGCTCCATGCAAACCAGAAACTGGAGCACTCATATCCACAAGACCAGCCTGTGCCATACCCTGTTCCCAACTGCCCACCCTCCCTTTTCTCCAATCCCACTTCCATCCCACTCCTTCCCAAAGCAAGCAGCACAGACATCAGAGAGCCTAACAGagtctctcaattaaaacaatgagcacatcaacaatcagcaagtatttgtgtaaggccaacactatgaaagaaatag----aaccattaaaaaaaaaaaaa--aagaacttacaaaggccaagtgtaatcatagcaaaacttaatgcaattcaaatattcagaagagt s panTro4.chr3 13848329 705 - 202329955 TAAATAAGATATATTCCTAACaaatgaaagaaaagacatttttta--aagctataactcaaaatcatgaagtggtctcttgatggaccaaaaacggtggagaattcctaaagatgaaatgctggtgaaatgatgataggatctgactgaagaaagaaaacttagtttaaaatgtggatgggagagcACCATGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTTTGGCCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGTGCTCCATGCAAACCACAAACTGGAGCACTCATATCCACAAGACCAGCCTGTGCCATACCCTGTTCCCAACTGCCCACCCTCCCTTTTCTCCAATCCCACTTCCATCCCACTCCTTCCCAAAGCAAGCAGCACAGACATCAGAGAGCCTAACAGAGTCTCTCAATTAAAACAATGAGCACATCAACAATCAGCAAGTATTTGCGTAAGGCCAACACTATGAAAGAAATAG----AACAATTAAAAAAAAAAAAA-GAAGAACTTACAAAGGCCAAGTGTAATCATAGCAAGACTTAATGCAATTCAAATACTCAGAAGAGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14383145 698 - 123690457 TAAATAAGATATGTTCCTAACAAATGAAAGACA-----TTTTTTA--AAGCTATAACCCAAAATCATGAAGGGGTCTCTTGATGGACCAAAAACAGTGGAAAATTCCTAAAGATGAAATGCTGATGAAATGATGATAGGATCTGATTGAAGAAAGAAAACTTAGTTTAAAATGTGGGTGGGAGAGCACCATGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGAG----AAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGCCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCTCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGTGCTCCATGCAAACCAGAAACTGGAGCACCCATATCCACAAGACCAGCCTGTGCCATACCCTGTTCCCAACTGCCCACCCTCCCTTTTCTCCAATCCCACTTCCATCCCACTCCTTCCCAAAGCAAGCAGCACAGACATC--AGAGCCTAACAGAGTCTCTCAATTAAAACAATGAGCACATCAACAATCAGCAAGTATTTGAGTAAGGCCAACACTATGAAAGAAATAGAACAAACCATTAAAAAAAAGAAGAAGAAGAACTTACAAAGGCCAAGCATAATCATAGCAAGACTTAATGCAATTCAAATACTTGGAAGAgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103679026 703 + 192599291 TAAATAGGATATATTCCTAACaaatgaaagaaaagatattgttta--aagttataactcaaaatcatgaaggggtctcttgatggaccagaaactgtggagaattcctaaagatgaaacactgatgaaatgatgataggattggattgaagaaagaatacttagtttaaaatatggatgggagagcACCATGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGCCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGCGCTCCATGAATACTAGAAACTGGAGCACCCACATCTGCAAGACCAGCCTGTACCATACCCTGTTCCTAACTGTCCACCCTTCCTTGTCTCCAACCTCACTTCCATCCCACTCTTTCCCAAAGCAAGCAGCACAGACATCAGAGAGTCTAACAGAGTCTCTCGATTAAAACAAAGAGCACATCAACAATCAGCAATTATTTGAGTAAGGCC-ACACTATGAAAGAAATAGAATGAACCATTTAAAAAAAAA-----AAGAAATTACAAAGTCCAAGTATAATCATAGCAAGACTTAATACAATTCAAATACTTGGAAGGgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103323731 703 - 192460366 TAAATAGGATATATTCCTAACaaatgaaagaaaagatattgttta--aagttataactcaaaatcatgaaggggtctcttgatggaccagaaactgtggagaattcctaaagatgaaacgctgatgaaatgatgataggattggattgaagaaagaaTACTTAGTTTAAAATATGGATGGGAGAGCACCATGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGCCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGCGCTCCATGAATACCAGAAACTGGAGCACCCACATCTGCAAGACCAGCCTGTACCATACCCTGTTCCTAACTGTCCACCCTTCCTTGTCTCCAACCTCACTTCCATCCCACTCTTTCCCAAAGCAAGCAGCACAGACATCAGAGAGTCTAACAGAGTCTCTCGATTAAAACAAAGAGCACATCAACAATCAGCAATTATTTGAGTAAGGCC-ACACTATGAAAGAAATAGAATGAACCATTTAAAAAAAAA-----AAGAAATTACAAAGTCCAAGTATAATCATAGCAAGACTTAATACAATTCAAATACTTGGAAGGgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101117085 708 + 187378091 taaataaGATATATTCctaacaaatgaaagaaaagatattgTTTA--AAGTTATAACTCAAAATCATGAAGGGGTCTTTTGATGGACCAGAAACTGTGGAGAATTCCTAAAGATGAAACGCTGATGAAATGATGATAGGATCggattgaagaaagaaaatttagtttaaaatgtgGATGGGAGAGCACCATGACCAAGGAGGAAgggcctgggagctggagggatCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGTCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGTGTTCCATGAATACCAGAAACTGGAGCACCCACATCCGCAAGAGCAGCCTGTGCCATACCCTGTTCCCAACTGTCCACCCTTCCTTGTCTCCAACCTCACTTCCATCCCACTCTTTCCCAAAGCAAGCAGCACAGACATCAGACAGTCTAACAGAGTCTCTCAATTAAAACAAAGAGCACATCAACAATCAGCAATTATTTGAGTAAGGCC-ACACtatgaaagaaatagaatgaaccatttaaaaaaaaaagaagaagaaattacaaaGTCCAAGTGTAATCATAGCAAGACTTAATACAATTCAAATACTCGGAaaggg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4981255 706 + 91754291 TAAATAAGATATATTCCTAACaaatgaaagaaaagatattgttta--aagttataactcaaaatcatgaaggggtctcttgatggaccagaaactgtggagaattcctaaagatgaaacgctgatgaaatGATGATAGGATTGGACTGAAGAAAGAATACTTAGTTTAAAATATGGATGGGAGAGCACCACGACCAAGGAGGAAGGGCCTGGGAGCTGGAGGGATCTGGGGCAACCCAAAGGGAGAAACCATCAAGAGGAACTGCCACGTGTTT-GGCCTCCATAAACCAATTCCTGCTCACATATTCACAAATGCCCAGCCAGCCAGAGGCAACTGGG----TTCCCACCAGGTAGGGCAATGGCTGTCAGCTTGGGTCAGAGAGACAAAGCAGCGCTCCATGAATACCAGAAACTGGAGCACCCACATCTGCAAGACCAGCCTGTGCCATACCCTGTTCCTAACTGTCCACCCTTCCTTGTCTCCAACCTCACTTCCATCCCACTCTTTCCCAAAGCAAGCAGCACAGACATCAGAGAGTCTAACAGAGTCTCTCAATTAAAACAAAGGGCACATCAACAATCAGCAATTATTTGAGTAAGGCC-ACACTATGAAAGAAATAGAATGAACCATTTAAAAAAAAA--AAAAAGAAATTACAAAGTCCAAGTGTAATCATAGCAAGACTTAATACAATTCAAACACTCGGAAGGgg i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24819466 625 - 42124431 TAAATAAGGTACAATCCTAAGAAATGAAAGACAAGATATTCTTTATTCATCTGCAACTCAAAATCATGAAGGGATCGCTCGGTGGATCCGAAAC--TGGAGAAT---TAGAGATGGGATG--------------------------GGAAGGAAGAAAACACAGAAGAAAACATGGAGAGGAAAGCACCATGCCAGAGGAAGGGGCACCTGGGAGCTGGCTGGGGCAAGGGCAACTCAGAGGGAG-AACTGCCTAAAAGAGC-----AATGTTT-GGGCTCTATTAACCAACCCCTGCCCACATGAATAGAAACACTCAGCCAGTCAGAGGCCACTGGGGCATCTCCCTCCAGGCAACTTAGTGTAGGTGGGCTTGGGTCAGAGAGACAAGGCA------TGTGTCTGCCAGAAACCAGAGT-CCCACACCCACCAGACCAGCCTCTGCCACAACCTGTTCCT-GCTGCCCACCCT-CCTCTTCCCTACCCTCGCTCCCATGCATTCCCTTCCTGA--CAAGCCATACCAACAC-----AGCCCAACTTGGCCTCTCAACCCCAAGGGCCAGCACA------------------------GGTGACAGCACCATGAAAGAAGTAGAATGGACAAT-------AAAA-----GAGAACTTACAGAAGCAAAGTGTAATCATAGTGAT-TATAATAAAATCCAAatcctcagaggagt i canFam3.chr34 C 0 I 142 e ponAbe2.chr3 13825436 11466 - 202140232 I e calJac3.chr15 92439687 13539 - 98464013 T a score=413274.000000 s hg38.chr3_KI270781v1_alt 99129 248 + 113034 ctgggtgcagtggctcac-acctgtaatcccagcactttgggaggccaaggtgggtggatcatctgaggttaggagttcgagaccagcctggcc-aacatggcaaaaccttgtctctactaaaaatataaaaattatctgggtgtggtggcacacacctgtaatcccagcaactcatgaggctgaggaaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagattgcaccactgcact s panTro4.chr3 13849034 249 - 202329955 ctgggtgcagtggctcactacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggttaggagttcaagaccagcctggcc-aacatggcaaaaccttgtctctactaaaaatataaaaattatctgggtgtggtggcacacacctgtaatcccagcaactcatgaggctgaggaaggagaatcacttgaacctgggaggtggaggttgcagtgagccaagattgcaccactgcact i panTro4.chr3 C 0 I 4706 s nomLeu3.chr11 14383843 231 - 123690457 ctgggtgcagtggctcac-atctgtaatcccagcactt-----------------tggatcacccgaggttaggagttcaagaccagcctggcc-aacatggcaaaaccccatctctactaaaaatataaaaattagccaggtgtggtggcacacacttgtaatcccagctatttatgaggttgaggaaggagaatcgcttgaatgcgggaggtggaggttgcagtgagccgagatcgcgccactgcact i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103679729 248 + 192599291 cagggtgcggtggctcac-acctgtaatcccagcactttgggaggccgaggagggtggatcacctgaggtcaggaattcgagaccagcctggtt-aacatggaaaaacaccgtctctactaaaaataaaaaaattaactgggtgtggtggcacaaacctataatcccagctacgcaggaggctgaggaagcagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcgccactgcact i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103324434 249 - 192460366 cagggtgcggtggctcac-acctgtaatcccagcactttgggaggccgaggagggtggatcacctgaggtcaggaattcgagaccagcctggccaaacatggaaaaaccccgtctctactaaaaataaaaaaattaactgggtgtggtggcacaaacctataatcccagctacgcaggaggctgaggaagcagaatcgcttgaacctgcgaggtggaggttgcagtgagccgagattgcgccactgcact i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101117793 247 + 187378091 cagggtgcggtggctcgc-acctgtaataacagcactttgggaggccgaggagggtggatcacctgaggtcaggaattcaagaccagcctggcc-aacatggaaaaaccccgtctctactaaaaataaaaaaa-taactgggtgtggtggcacaaacctataatcccagctacgcaggaggctgaggaagcagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcgccactgcact i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4981961 248 + 91754291 cagggtgcggtggctcac-acctgtaatcccagcactttgggaggccgaggagggtggatcacctgaggtcaggaattcgagaccagcctggcc-aacatggaaaaaccccgtctctactaaaaataaaaaagtgaactgggtgtggtggcacaaacctataatcccagctacgcaggaggctgaggaagcagaatcgcttgaacctgggaggtggaggttgcagtgagccgagactgcaccactgcact i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=426858.000000 s hg38.chr3_KI270781v1_alt 99377 359 + 113034 acagcctgcacgatagaagcaagactccatctcc------------aaaaaaaataaaaaaataaaaaagcaaatacttggaagaataagggaaggtctaatagccaagacataaaaacaaatttaggcaagctgtga--tttaaaaaaaaaagtcaataaggcatctcaaaaattttgtaatggaaataaaaaattaagcagatgagctgacaacaaaatAATCACAATTTGTAAGAATTACTGAgctaggaagtgagtaggatgatatattcaaagcactgaaag----aaaaaactgccaaccaagactactatacctgacaaaactgtcctacaaaaatgaaagagaaataaagactaccagacaaataaaag s nomLeu3.chr11 14384074 346 - 123690457 ccagcctgcatgatgggagcaagactccatctcc------------aaaa-------------aaaaaagcaaaTACTTGGAAGAATAAGGAAGGGTCTAATAGCCAACAAACAAAAACAAATTTAGGCAAGCTGTGA--TTT-AAAAAAAAAGTCAATAAGGCATCTCAAAAATTTTATAATGGAAATAAAAAATTAAGCAGATGAGCTGACAACAAAATAATTACAATTTATAAGAATTACTGagctaggaagggagtaggatgatatattcaaagcactgaaag---aaaaaaactgccaaccaagactactatacctgacaaaactgtccttcaaaaatgaaagagaaataaagactaccagacaaacaaaag i nomLeu3.chr11 C 0 I 1122 s rheMac3.chr2 103679977 359 + 192599291 ccagactgggtgacag-agcaagactccatctcc------------aaataaaaaaaa-----aaaaaagcaaaTACTTGGAAGAATAAGGGAAGGTCTAATAACCAAGAAACAAAAACAAATTTAGGCAAGCTGTGATTTTTTTAAAAAAAAGTCAATAAGGCATCTCaaatattttttaatagaaataaaaaattaaGCAGATGAGCTGATAACAAAATAATTACAATTTATAAGGATTACTGAGCTAGgaagggagtaggatgatacattcaaagcactgaaagacaaaaaaaactgccaaccaagaatactatacctgacaaaactgtccttcaaaaatgaaagagaaataaagactaccagacaaacaaaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103324683 357 - 192460366 ccagactgggtgacag-agcaagactccatctcc------------aaat--aaaaaa-----aaaaaaGCAAATACTTGGAAGAATAAGGGAAGGTCTAATAACCAAGAAACAAAAACAAATTTAGGCAAGCTGTGATTTTTTTAAAAAAAAGTCAATAAGGCATCTCAAATATTTTTTAATAGAAATAAAAAATTAAGCAGATGAGCTGATAACAAAATAATTACAATTTATAAGGATTACTGAgctaggaagggagtaggatgatacattcaaagcactgaaagacaaaaaaaactgccaaccaagaatactatacctgacaaaactgtccttcaaaaatgaaagagaaataaagactaccagacaaacaaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101118040 371 + 187378091 ccagactgggtgacag-agcaagactccatctccacaaaaaaataaaaataaaataaaattttaaaaaagcaaatacttgGAAGAACAAGGGAGGGTCTAAtaaccaagaaacaaaaacaaatttaggcaagctgtga--ttttaaaaaaaaagtcaataagccatctcaaatattttttaatagaaataaaaaattaagcagaTGAGTTGacaacaaaataattacaatttataAGGATTACTGAGCTAGGAAGGAAGTAGGATAATACATtcaaagcactgaaag---aaaaaaactgccaaccaagaatatTATACCTgacaaaactgtccttcaaaaatgaaagagaaataaagactaccagacaaacaaaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4982209 356 + 91754291 ccagactgggtgacag-agcaagactccatctcc------------aaataaaaaaaa-----aaaaaagcaaaTACTTGGAAGAATAAGGGAGGGTCTAATAACCAAGAAACAAAAACAAATTTAGACAAGCTGTGATTTTTTTTAAAAAAAGTCAATAAGGCATCTCAAATATTTTTTAATAGAAATAAAAAATTAAGCAGATGAGCTGATAACAAAATAATTACAATTTATAAGGATTACTGAGCTAGgaagggagtaggatgatacattcaaagcactgaaag---aaaaaaactgccaaccaagaatactatacctgacaaaactgtccttcaaaaatgaaagagaaataaagactatcagacaaacaaaag i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13849283 4706 - 202329955 I a score=317115.000000 s hg38.chr3_KI270781v1_alt 99736 374 + 113034 ctgagagagttcatcactagacctgccttacaagaaatactaaaggaagttcttcaagttgaaatgaaagtatgctaaatagccacacaatattaaaagaaagtgtgaaactcactagtaaaggtaaatgtatagacaaatatagaatactgtaatactgtaatggtgatggagaaatcacttttaattctcctatacaagttaaaagaaaaaag-atggaaaataactataactggccaggcatggtggctcatgcctacaatcccaacactttgggaggccaaggcgggcagatcacttgaggtcagaagttcgaaaccagcctggccaacatgttgaaaccccacctccactaaaaggataaaaaattagcc s rheMac3.chr2 103680336 371 + 192599291 ct----gagttcatcactagacctgccttacaagaaatgttaaaggaagttcttcaagttgaaatgaaaggatgctaaatagcaacatggtattaaaagaaagtatgaaactcattggtaaaggtaaatgtatagacaaatatagaacactgtattactgtaatggtggtagagaaattacttttaattctcctgtacaagttaaaagacaaaagcattgaaaataactataaccggccaggcatagtggctcacgcctgtaatcccaacactttgagaggccaaggcaggcagatcacttgaggtcagaagtttgaaaccagcctggccaatgtggtgagaccccatctctactaaaaggataataaattagcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103325040 371 - 192460366 ct----gagttcatcactagacctgccttacaagaaatgttaaaggaagttcttcaagttgaaatgaaaggatgctaaatagcaacatggtattaaaagaaagtatgaaactcattggtaaaggtaaatgtatagacaaatatagaacactgtattactgtaatggtggtagagaaatcacttttaattctcctgtacaagttaaaagacaaaagcattgaaaataactataaccggccaggcatagtggctcacgcctgtaatcccaacactttgagaggccaaggcaggcagatcacttgaggtcagaagtttgaaaccagcctggccaatgtggtgagaccccatctctactaaaaggataataaattagcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101118411 370 + 187378091 ct----gagttcatcactagacctgccttacaagaaatgctaaaggaatttcttcaagttgaaatgaaaggatgctAACTAGCAACATGATATTAAAAGAAAGTATGAGACTCATTGGTAAAGGTAAATGTATAGACAAATATAGAACACTGTATTACTGTAATGGTGGCAGAGAAATCACTTTTAATTCTCCTGTacaagttaaaagacaaaagcatTGAAAATAACTataaccagccaggcatggtggctcacgcctgtaatcccaacactttgagaggccaaggc-ggcagatcacttgaggtcagaagttcaaaaccagcctggccaatgtggtgagaccccatctctactaaaaggataataaattagcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4982565 371 + 91754291 ct----gagttcatcactagacctgccgtacaagaaatgctaaaggaagttcttcaagttgaaatgaaaggatgctaaatagcaacatggtattaaaagaaagtatgaaactcattggtaaagataaatatatagacaaatatagaacactgtattactgtaatggtggtagagaaataacttttaattctcctgtacaagttaaaagacaaaagcattgaaaataactataaCCggccaggcatggtggctcatgcctgtaatcccaacactttgagaggccaaggcaggcagatcacttgaggtcagaagtttgaaaccagcctagccaatgtggtgagaccccatctctactaaaaggataataaattagcc i chlSab2.chr15 C 0 I 39 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14384420 1122 - 123690457 I e panTro4.chr3 13849283 4706 - 202329955 I a score=4122.000000 s hg38.chr3_KI270781v1_alt 100110 9 + 113034 aagcatggt s rheMac3.chr2 103680707 9 + 192599291 agtcatggt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103325411 9 - 192460366 agtcatggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101118781 9 + 187378091 agtcatggt i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4982936 39 + 91754291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14384420 1122 - 123690457 I e panTro4.chr3 13849283 4706 - 202329955 I a score=137221.000000 s hg38.chr3_KI270781v1_alt 100119 178 + 113034 ggcacatgcctgtaatcccagctactgggaaggccaaggcaggagaatcgcttgaaccccagagacagaggttgcagtgagctgagatcacaccactgtactccagcctggaccacagagcaagactctgtca--aaaaaaaaaaaaaaaaaaagaag--aagaagaaag--------------------------------------------aaaagaaaagaa------------------------ s rheMac3.chr2 103680716 197 + 192599291 ggcatgtgcctgtaatcccagctactggggaggccaaggtaggagaatcgcttgaaccccagaggcagaggttgcagtgagccgagatcacaccactgcactccagcccaggcaacagagcaagaccctgtctaaaaaaaaaaaaaaagaaaaggaaggaaggaagaaaggaaggaaggaaggaa-----------------------------agaaggaaagaa------------------------ i rheMac3.chr2 C 0 I 47 s macFas5.chr2 103325420 196 - 192460366 ggcatgtgcctgtaatcccagctactggggaggccaaggtaggagaatcgcttgaaccccagaggcagaggttgcagtgagccgagatcacaccactgcactccagcccaggcaacagagcaagaccctgtct-aaaaaaaaaaaaaagaaaaggaaggaaggaagaaaggaaggaaggaaggaa-----------------------------agaaggaaagaa------------------------ i macFas5.chr2 C 0 I 47 s papAnu2.chr2 101118790 174 + 187378091 ggcacatgcctgtaatcccagctactggggaggccaagataggagaatcgcttgaaccccagaggcagaggttgcagtgagctgagatcacaccactgtgctccagcccaggcaacagagcaagatcctgtct--aaaaaaaaaaaaagaaaaggaaggaaggaaggaa--------------------------------------------------gaaagag------------------------ i papAnu2.chr2 C 0 I 4742 s chlSab2.chr15 4982975 249 + 91754291 ggcatgtgcctgtaatcccagctactggggaggccaaggtaggagaatcgcttgaaccccagaggcagaggttgcagtgggccgagatcacaccactgcactccagcccaggcaacagagcaagaccctgtct-aaaaaaaaagaaaagaaaaggaaggaaggaagaaaggaaggaaggaaggaaggaaagaaggaaggaaggaagaaagaaagagaaagaaagaaagagagaaagaaagtgaaaaagaa i chlSab2.chr15 I 39 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14384420 1122 - 123690457 I e panTro4.chr3 13849283 4706 - 202329955 I a score=211623.000000 s hg38.chr3_KI270781v1_alt 100297 397 + 113034 ctataaccaaaaatatattaaaatatac--tcttaatccatttactgttgctataactgaatacctgagacagggtaatctataaatgaaagaagtttattgtttaaagttctagagttggggaagtccaaggtcaagggaccacatctggtggaggccttcttgctggtggggacaccctgcataatcccaagacagtacaggacatcacatggtgagggggctgagagcgctagctcaggtctctcttcctctgcttataaagccaccagttccacttctgtgataatctatttacccattaatccattaatccaataatggattaatccactcatgagggtagggccttcatgatccaatcacctcttaaaggccccacctctc-aatactgccaca s rheMac3.chr2 103680960 400 + 192599291 ctataaccaaaaatatattaaaagatactgtcttcatcaacttactgtggctataactgaatacctgagacagggtaatctataaatgaaagaagtttattttttaaagttctagagtcagggaagtccaaggtcacagggccacatctggtggaggccttcttgctggtggggacaccctgtataatcccaagacagtacaggacatcatatggtgagggggctgagagcactagctcaggtctctcttcctctgcttataaagccaccagttccacttctgtgataatctatttacccattaatccattaacctaataatggattaatccattctgaagggcagggccctcatgatccaatcacctcttaaaggcgccacctctcaaatactgccaca i rheMac3.chr2 I 47 C 0 s macFas5.chr2 103325663 400 - 192460366 ctataaccaaaaatatattaaaagatactgtcttcatcaacttactgtggctataactgaatacctgagacagggtaatctataaatgaaagaagtttattttttaaagttctagagtcagggaagtccaaggtcacagggccacatctggtggaggccttcttgctggtggggacaccctgtataatcccaagacagtacaggacatcatatggtgagggggctgagagcactagctcaggtctctcttcctctgcttataaagccaccagttccacttctgtgataatctatttacccattaatccattaacctaataatggattaatccattctgaagggcagggccctcatgatccaatcacctcttaaaggcgccacctctcaaatactgccaca i macFas5.chr2 I 47 C 0 s chlSab2.chr15 4983224 400 + 91754291 CTATAACCAAAAATATATTAAAAGATACtgtcttcatcaacttactgtggctataactgaatacctgagacagggtaatctataaatgaaagaagtttattttttaaagttctagagtcagagaagtccaaggacacagggccacatctggtggaggccttcttgctggtggggacaccctgtataatcccaagacagtacaggacatcatatggtgagggggctgagagcactagctcaggtctctcttcctctgcttataaagccaccagttccacttctgtgataatctatttacccattaatccattaatctaataatggattaatccattcttaagggcagggccctcatgatccaatcacctcttaaaggcgccacctctcaaatactgccaca i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e papAnu2.chr2 101118964 4742 + 187378091 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e nomLeu3.chr11 14384420 1122 - 123690457 I e panTro4.chr3 13849283 4706 - 202329955 I a score=1633499.000000 s hg38.chr3_KI270781v1_alt 100694 2053 + 113034 ctggggattaggtttcaacatgagtttctgatggcacaaatattcaagtcttggcatatgcacagaattaagagatataaattatg---acaataatataaagtgtgatgggggtagaagttaaagtgtaaagcttttgtacatgattaaacttaaattatcagcttaaaataaactgtcataactataaaatattttacctaagccccaaggtaactacaaaataaatacctatagaagttacacaagggccaggcatagtggctcacccctgtaatcctagcactttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtaaacccccacctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctacttagaaggctgaggcaggagaatcacttgaacccagagggcagaggttgcagtgagccgagattgccccacttcactccagcctgggtgacacagcgagactccgtcttcaaa--------------------aaaaaaaagaagaagttacacacacacacacatacacacacacaaaaggaatcaaagcatagcaatacaaaa----aaataaaacacaagggaagacagcaagggggaaaagacaga-aaaaaacc-ccacgaggctatcagaaaacaactaacaaaatggcaatagtaaatccttttctatcaataattactttaactgtaaatgtcggtatgtatcactataccctcttaggactgcttttgttgcatctcataagtttcacaactcaactgactgggaaaaaaatgacaacctaagcccaaagttagcagaaagaaagaaataccaaagattagggcacagataa----gattgaaaaaagaaaaacaatagaaaaaaatcggccgggcacggtggctcacacctgtaatccca----gcactttaggaggctgaggtgggctgatcacctgtggtcagcggttcaagatcagcctgaccaacatggcgaaatcctatctctactaaaa--atacaaaattagccgggtgtggtggcgcatgcctgtaatcccagctacttcggaggctgaggcaggagaatcacttgaacctgggaggcaaatgttgcagcgagccgagatcgtgccattgcaccccagcctgggcaacaaagcaagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaggaaagaaa---------------------------------------------a-gaaaaaaatgaacaaaactaagaattagctttttgaaaagataaagaaaattgacaaatctttggctagactaactcagaaaaaaagataaaacagttaagtgagatcagaaaagaaagaggaaactgtaaaattcctagaagaaaacactgaggaaaatctttgtgacatggatctttgcaatgatttcacagatatga-------------caccaaaatcacagacaacaaaagcaaatataaaaagtgggactacatcaaactaaaaagcttctgcatggcaaagaaaagaatcaagaatgaaaggcaacctatgaaatgagaggaaatattttcaaaccatatgactggtgaggggttaatctctaaaaagtataaggagccaggcacggtggctcacgcctgtaatcccaacactttgggaggccgaggcaggaggatcacctgaggtcaggagttccagaccagcctggctaacatggtgaaacctcatctctaccaaaaatac-aacattagccaggtgtg------------------------------atggtgcatacctgtaatcccagctaccagggagtctgaggcaggagaatcatatgaacccaggagacagaggttgtagtgagctgagattccagcctgggtgacaagagcgaaactc-tgtctcaaaaataaaatataataaaataaaaaatatagggaacttctacaactcaatagtttagaaaaaactaataacctgattttaaaatgggctaatgatttgaatagacatttctacgaagaagacatataaatggccaacaagtatatgaaaaaatgttcaatccctaattgagcactaatcatcactaatcatc s nomLeu3.chr11 14385542 2079 - 123690457 ccagggattaggtttcaacatgagtttctgatggcacaaacattcaagccttggcatatgcacccaatgaagagatgtaaattatggcaacaataatataaagtgtagtggggatagaaatta-----taaagtttttgtatgtgattaaacttgaattatcagcttaaaataaactgtcataacaataaaatattttaactaagccccaaggtaactacaaaataaatacctatagaacatacacaaaggccaggcatagtggctaacccctgtaatgctagcactttgggaggccaaagcaggaggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccacctctactaaaaatacaaaaattagctgggcatggtggcgcatgcctgtaatcccagctacttaggaggctgaggcaggagaatcacttgaacccagagggcagaggttgcagtgagccgagattgccccactgcactccagcgtgggtgacatagcgagactccgtcttcaaa--------------------aaaaaaaa-aagaagttacacacacacacaca----------caaaaggaatcaaagcatagcaatacaaaa----aaataaaacacaagggaagacagcaaggaggaaaagacagacaaaaaaac-ccacaaggctatcagaaaacaactaagaaaatggcaatagtaaatccttttctatcaataattactttaactgtaaatgtcggtatgtatcactataccctcttaggatggcgtttgttgcatctcataagtttcacaactcaactgactggggaaaaaatgacaaactaagcccaaagttggcagaaagaaagaaataccaaagattagagcacagataaataagactgaaaaaagaaaaacaatagaaaaaaatcagccaggcacagtggctcacacctgtaatccca----gcactctaggaggccgaggtgggcgcatcacctgtggtcaggagttcaagaccagcctgaccaacatggcgaaaccctatcgctactaaaa--atgcaaaattagctgggtgtggtggcgcatgcctgtaatcccagctacttcggaggctgag-caggagaatcacttgaacctgggaagcaaatgttgcaacgagccgagatcacaccattgcaccccagcccgggagacagagcaagactccgtctcaaaaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaa-gaaaaaaatgaacaaaactaagaattagcttttttacaagataaagaaaattgacaaatctttggctagactaactcataaaaaaaggtaaaacacttaaatgaaatcaggaaagaaagaggaaactgtaaaattcctagaagaaaacactgaggaaaatctctgtgacattgatcttcacaatgatttcacagatatga-------------caccaaaaacacagacaacaaaagcaaatataaaaagtgggacaacatcaaactaaaaagcttctgcacggcaaaggaaagaatcaagaatgaaaggcaacttatgaaatgagaggaaatattttcaaaccatatgactgatgaggggttaatctctaaaaaatataaggagccaggtgcggtggctcacgcctgtaatcccaacactctgggaggccgaggcaggaggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaaccttgtctctaccaaaaatac-aacattagctgggtgtg------------------------------gtggtgcacacctgtaatcccagctaccagggagtctgaggcaggagaatcacttgaacccgggaggcagaagttgtagtgagctgagattccagcctgggtgacaagagagaaactc-tatctcaaaaataaaatataataaaataaaaaatataaggaacttctacaactcgatagttcagaacaaactaataacctgattttaaaataggctaatgatttgaatagacatttctacaaagaagacatataaatggccaacaagtatatgaaaaaatgttcaatccctaattgagcactaatcatc---------- i nomLeu3.chr11 I 1122 C 0 s rheMac3.chr2 103681360 2028 + 192599291 ctggggattaggtttcaacatgagtttctgatggcacaaacattcaagccttggcatatgcacccagtgaagtgatgtaaattatg---ataataatataaagtgtgatgggggaagaagttaaagtgtaaagtttttgtacgtgattaaacttaaattatcagcttaaaataaactgtcataactataaaatattttacctaagccccaaggtaactacaaaataaatacctatagaagttacacaagggccaggcatagtggctcacccctgtaatcctagcactttgggaggccgaggcaagtggatcacctgaggtcaggagttcgaaaccagcctggacaacatggtgaaccaccacctctattaaaaacacaaaaattaactgggcatggtggcgcatgcctgtaatcttagctacttaggaggctgaggcagaagaatcacttgaacccagagggtggaggttgcagtgagccgagattgtcccactttgctccagcctaggtgtcacagcgagactccgtcttc-----------------------aaaaaaaacaagaaGTT------acacacacacacacacacacaaaaggaatcaaagaatagcaatacaaaaaaataaacaaaacataagggaagacagcaaggaagaaaagacagaccaaaaaac-ccacaaggctatcagaaaacaactaacaaaatggcaatagtaaatgcttttctatcaataattactgtaactgtaaatgtcagcatgtatcactataccctcttaggactgcttttgttgcatctcatatgtttcacaactcaactgactgggaaaaaaatgacaaactaagcccaaagttagcagaaagaaataaatactgaagattagagcacagaaaaataagattgaaaaaagaaaaacaatacaaaaaaattggccgggcacggtggctcacacttgtaatcccagcatgcacttaaggaggccgaggtgggcggatcacctatggtcagaagttcaagaccagccagaccaacatggcgaaaccccatctctactaaaaatatacaaaattagccaggcatggtggcgcatgcctgtaatcccagctacttgggaggctgaggcagga---------------gggagacagaggttgcagtgagccaagatcacaccattgcaccccagcctgggcaaaagagcgagactccgtctcaa-----------------------taaagaaa---------------------------------------------a-gaaaaaaatgaacaaaactaagaattaggtttttgaaaagataaagaaaattgacaaatctttggctagactaactcagaaaaaaaggtaaaacagttaaataaaatcagaaaagaaagaggaaactataaaattcctagaagaaaccactgaggaaaatctttgtgacattgatcttcacagtgatttcacagatatggttgtggcatatcataccacaagctcaagcatcaaaagcaaatataaaaagtgggactacatcaaactaaaaagcttctgcatggcaaaggaaagaatcaagaatgaaaggcaacctatgaaatgagaggaaatatgttcaaaccatatgactggtgaggggttaatctctaaaaaatataaggagccaggcacggtggctcatgcctgcaatcccaacactttgggaggctgaggcaggagggtcacctgaggtcaggagttccagactggcccagccaacatggtgaaacctcgtctctaccaaaaatacaaaaactagtcgggtgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------nggcaggagaatcatttgaacccaggaggcagaggttgtagtgagctgagattccagcctgggtgacaagagcgaaactcttgtttcaaaaataaaatataataaaattaaaaatataaggaacttctacaactcaatagtttcgaacaaactaataacctgattttaaaatgggctaatgatttgaatagacatttctccaaacaagacatacaaatgggcaacaagtatgtgaaaaaatgttcaatccctatttgagcactaattatcacaaatcatc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103326063 2057 - 192460366 ctgggggttaggtttcaacatgagtttctgatggcacaaacattcaagccttggcatatgcacccagtgaagtgatgtaaattatg---ataataatataaagtgtgatgggggaagaagttaaagtgtaaagtttttgtacgtgattaaacttaaattatcagcttaaaataaactgtcataactataaaatattttacctaagccccaaggtaactacaaaataaatacctatagaagttacacaagggccaggcatagtggctcacccctgtaatcctagcactttgggaggccgaggcaagtggatcacctgaggtcaggagttcgaaaccagcctggacaacatggtgaaacaccacctctattaaaaacacaaaaattaactgggcatggtggcgcatgcctgtaatcttagctacttaggaggctgaggcagaagaatcacttgaacccagagggtggaggttgcagtgagccgagattgtcccacttcgctccagcctaggtgtcacagcgagactccgtcttcaaaaaaaaaaaaaacaaaacaaaaaaaaaaACAAGAAGTTacacacacacacacacacacacacacaaaaggaatcaaagaatagcaatacaaaaaaataaacaaaacataagggaagacagcaaggaagaaaagacagaccaaaaaac-ccacaaggctatcagaaaacaactaacaaaatggcaatagtaaatgcttttctatcaataattactgtaactgtaaatgtcagcatgtatcactataccctcttaggactgcttttgttgcatctcatatgtttcacaactcaactgactgggaaaaaaatgacaaactaagcccaaagttagcagaaagaaataaatactgaagattagagcacagataaataagattgaaaaaagaaaaacaatacaaaaaaattggccgggcacggtggctcacacttgtaatcccagcatgcacttaaggaggccgaggtgggcggatcacctatggtcagaagttcaagaccagccagaccaacatggcgaaacctcatctctactaaaaatatacaaaattagccaggcatggtggcgcatgcctgtaatcccagctacttgggaggctgaggcagga---------gaacccgggagacagaggttgcagcgagccaagatcacaccattgcaccccagcctgggcaaaagagcgagactccgtctcaa-----------------------taaagaaa---------------------------------------------a-gaaaaaaatgaacaaaactaagaattaggtttttgaaaagataaagaaaattgacaaatctttggctagactaactcagaaaaaaaggtaaaacagttaaataaaatcagaaaagaaagaggaaactataaaattcctagaagaaaccactgaggaaaatctttgtgacattgatcttcacagtgatttcacagatatgg-------------caccaaaagcacagacaacagaagcaaatataaaaagtgggactacatcaaactaaaaagcttctgcatggcaaaggaaagaatcaagaatgaaaggcaacctatgaaatgagaggaaatatgttcaaaccatatgactggtgaggggttaatctctaaaaaatataaggagccaggcacggtggctcatgcctgcaatcccaacactttgggaggctgaggcaggagggtcacctgaggtcaggagttccagactggcccagccaacatggtgaaacctcgtctctaccgaaaatac-aacatttgccgggtgtg------------------------------gtggtgcatacctgtaatcccagctaccagggagtctgaggcaggagaatcatttgaacccaggaggcagaggttgtagtgagctgagattccagcctgggtgacaagagcgaaactcttgtttcaaaaataaaatataataaaattaaaaatataaggaacttctacaactcaatagtttcgaacaaactaataacctgattttaaaatgggctaatgatttgaatagacatttctccaaacaagacatacaaatggccaacaagtatgtgaaaaaatgttcaatccctatttgagcactaattatcacaaatcatc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4983624 2040 + 91754291 ctggggattaggtttcagcatgagtttctgatggcacaaacattcaagccttggcaTATGCACCCAGTgaagtgatataaattatg---ataataatataaagtgtgatgggggaagaagttaaagtgtaaagtttttgtacgtgattaaacttaaattatcagcttgaaataaactgtcataactataaaatattttacctaagccccaaggtaactacaaaataaatacctatagaagttacacaagggccaggcatagtggctcacccctgtaatcctagcactttgggaggccgaggcaggtggatcccctgaggtcaggagttcgacactagcctggccaacatggtgaaacaccacctctactaaaaatataaaaattaactgggcatggtggcgcatgcctgtaatcttagctacttaggaggctgaggcagaagaatcacttgaacccagagggtggaggttgcagtgagctgagattatcccacttcactccagcctgggtgtcacagcgagactccgtcttcaaaaaaaaaaaaaaaaa------aaaaaaaacaaGAAGTT--acacacacacacacacacacacacaaaaggaatcaaagcatagcaatacaaaaa---aaataaaacacaagggaagacagcaaggaagaaacgacagacaaaaaaacaccacaaggctatcagaaaacaactaacaaaatggcaatagtaaatgcttttctatcaataattactgtaactgtaaatgtcagcatgtatcactataccctcttggggctgcttttgttgcatctcatacgtttcacaactcaaccgactgggaaaaaaatgacaaactaagcccaaagttagcagaaagaaagaaataccaaagattagagcacagataaataagattgaaaaaagaaaaacaatacaaaaaaattggccaggcgcggtggctcacacctgtaatcaca----gcacttgaggaggccgaggtgggcggatcacctatggtcagaagttcaagaccagcctgaacaacatggcgaaaccccatctctactaaaaatatacaaaattagccaggcttggtagcgcatgcctgtaatcccagctacttgggaggctgaggcagga---------gaacccggaaggcagaggttgcagcgagccaagatcacaccattgcaccccagcctgggcaaaagagagagtctccgtctcag-----------------------taaagaaa---------------------------------------------attttaaaaatgaacaaaactaagaattaggtttttgaaaagataaagaaaattgacaaatctttggctagactaactcagaaaaaaaggtaaaacagttaaatgaaatcagaaaagaaagaggaaactataaaattcctagaagaaaacactgaggaaaatctttgtgacactgatcttcacagtgatttcacagatatgg-------------caccaaaagcacagacaacagaagcaaatataaaaagtgggactacatcaaactaaaaagcttctgcacggcaaaggaaagaatcaagaatgaaaggcaacctatgaaatgagaggaaatatgttcaaaccatatgactggtgaggggttaatctctaaaaaatataaggagccaggcacggtggctcatgcctgcaatcccaacactttgggaggccgaggcaggaggatcacctgaggtcaggagttccagaccggcccggccaacatggtgaaacctcgtctccactgaaaatac----atttgccaggtgtg------------------------------gtggtgcatacctgtaatcccagctaccagggagtctgaggcaggagaatcattagaacccaggaggcagaagttgtagcgagctgagattccagcctgggtgacaagagcgaaactc-tgtctcaaaaataaaatataataaaattaaaaatataaggaacttctacaactcaatagtttcgaacaaactaataacctgattttaaaatgggctaatgatttgaatagacatttctccaaacaagacatacaaatggccaacaagtatatgaaaaaatgttcaatccctatttgagcactaattatcacaaatcttc i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e papAnu2.chr2 101118964 4742 + 187378091 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13849283 4706 - 202329955 I a score=97961.000000 s hg38.chr3_KI270781v1_alt 102747 85 + 113034 tgggaaaggcaaatcaaaacagcaataagctatcacc-tcacacctatgaggatggctattaccaaaaacataaaagacaagtgtt s panTro4.chr3 13853989 85 - 202329955 tgggaatggcaaataaaaactacaataagttatcaccgtcacacctatgggga-ggcatttaccaaaaacataaaagacaaatgtt i panTro4.chr3 I 4706 C 0 s nomLeu3.chr11 14387621 85 - 123690457 tgggaaatgcaaatcaaaacagcaataagctatcacc-tcacacctatcaggatggctattaccaaaaacataaaagacaagtgtt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103683388 85 + 192599291 tgggaaatgcaaatcaaaacagcaataagctaccacc-tcacacctatcaggaaggctattaccaaaaacagaagagataagtgtt i rheMac3.chr2 C 0 I 3571 s macFas5.chr2 103328120 85 - 192460366 tgggaaatgcaaatcaaaacagcaataagctatcacc-tcacacctatcaggaaggctattaccaaaaacagaaaagataagtgtt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 4985664 85 + 91754291 tgggaaatgcaaatcaaaacagcaataagctatcacc-tcacacctatcaggatggctattaccaaaaacagaaaaggtaagtgtt i chlSab2.chr15 C 0 I 712 e ponAbe2.chr3 13825436 11466 - 202140232 I e papAnu2.chr2 101118964 4742 + 187378091 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=2925.000000 s hg38.chr3_KI270781v1_alt 102832 8 + 113034 ggccgggt s panTro4.chr3 13854074 8 - 202329955 ggccgggt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14387706 8 - 123690457 ggccgggt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103328205 8 - 192460366 aacaaggt i macFas5.chr2 C 0 I 3383 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4985749 712 + 91754291 I e papAnu2.chr2 101118964 4742 + 187378091 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=75322.000000 s hg38.chr3_KI270781v1_alt 102840 291 + 113034 gtgatggctcatgcctgtaatcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatcgaaaccatcctgacgaacacagtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgggcgcttgtagtcccagctcgggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagctgagatcatgctactgcactccagcctgggtgacagagcgagactctgtctcaaaataa-----aataaaataaaata s panTro4.chr3 13854082 291 - 202329955 ttgatggctcaagcctgtagtcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatggaaaccatcctgacgaacacagtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgggcgcttgtagtcccagctcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagatcatgctactgcactccagcctgggcgacagagcgagactccgtctcaaaataa-----aataaaataaaata i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14387714 296 - 123690457 gtggtggctcacgcctgtaatcccagcactttgggaggccgtggagggcagatcatgaggtcaggagatcgaaaccaacctgacgaacacagtgaaaccccgtctctactaaaaatacaaaaaattagccgggcatggtggcgggcacttgtagtcccagctcgggaggctgaggcaggagaacggcgtgaacctgggaggcggagcttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagcaagactccgtctcaaaaaaaataataataaaataaaata i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 13825436 11466 - 202140232 I e chlSab2.chr15 4985749 712 + 91754291 I e papAnu2.chr2 101118964 4742 + 187378091 I e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=530682.000000 s hg38.chr3_KI270781v1_alt 103131 1054 + 113034 aaaagacaagtgttagtaaggttgtagaaaaatcagaactcttgcacacagttgatggtaatgcaaaatgttgcaggtgcagccactgtgaaaaacagtatggaggtttctcaaaatattagaactagaaccgccatataatccagcatcctacttctggatatttacccagaggaattgagatcgggatcttaaagagatattagcactcttacgttcactgcagcactattcacaataggcaagatgtagaaacaaccttaatgtctattgacagatgaatatatgaggagaatgtggtatatacatatagtgaaatactattaaacctttaaaaagaaggacattctggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtggatcatgaggtcaggagttcgagaccagcctggacaatatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcgcatgcctgtagtccaagctactcaggaggctgaggcagaagaatcacttgaacctggaggcggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaa--aaggacattcttcaatatgtgacaaaatggataaagcttgaggacattaggctaagtgaaaaaaaatcctgtcacaggacaa--actgcatgattccacttatatgagatgtctaaaatggtgaaatttatggaatctaagagtggaatggcagttaccagggactgggg-acttactaaccagtaggcatcagggttcagtcaagcgagatgaataagctctagagatctgctgtgcaacatcga--atctctagtcaacagttaggtactgcacacttagaaattagttaaggggagaga--tctaatattaagtcttctATGACAAATTTTTTCTTTTTTTAAAAAGAAGGAGGTTAGAAAACAAAT-TTTTTTTAAACAAATGGAGGTGGAGGTTAGACGGCCA s panTro4.chr3 13854373 1046 - 202329955 aaaagataagtgttagtaaggttgtagaaaaatcagaactcttgcacacagttgatggtaatgcaaaatgttgcaggtgcagccactatgaaaaacagtatggaggtttctcaaaatattagaactagaaccaccatataatccagcatcctacttctggatatttacccagaggaactgagatgaggatcttaaagagatattagcactcttacgttcactgcagcactattcacaataggcaagatgtagaaacaaccttaatgtctattgacagatgaatatatgaggagaatgtggtatatacatatagtgaaatactattaagcctttaaaaagaaggacattctggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtggatcatgaggtcaggagttcgagaccagcctggccaatatggtgaaatcccatctctactaaaaatacaaaaattagccaggcatggtggcgcatgcctgtagtctaagctactcaggaggctgaggcagaagaatcacttgaacctggaggcggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactccatctcaaaaaaaagaaaaaaaaa-----------ggacattcttcaatatgtgacaacatggataaagcttgaggacattaggctaagtgaaaaaaa-tcctgtcacaggacaa--actacatgattccacttatatgagatatctaaaatggtgaaatttatggaatctaagagtggaatggcggttaccagggactgggggatttactaaccagtaggcatcagggttcagtcaagcgagatgaataagctctagagatctgctgtgcaatattga--atctctagtcaacaattaggtactgcacacttagaaattagttaaggggagaga--tctaatattaagtcttctATGACAAATTTTTTCTTTTTTTAAAAAGAAGGAGGTTAGAAAACAAATATTTTTTTAAACAAATGGAGGTGGAGGTTAGACGGCCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13836902 1048 - 202140232 aaaagataagtgttagcaaagctgtagaaaaatcagaactcttgcacacagttgatggtaatgcaaaatggtgcaggtgcagccactatgaaaaacagtatggaggtttctcaaaatactagaactagaaccaccatataattcagcatcctacttctggatatttacccagaagaatcaagatcaggatcttaaagagatattagcactcctacattcaccgcagcactattcacaataggcaagatgtagaaacaaccttaatgtctattaaccgatgaatatataaggagaatgtggtatatacatatagtgaaatactattcagcctttaaaaagaaggacattctggccgggcgcggtggct--cgcctgtaatcccaacactttgggaggccgaggcaggtggatcacaaggtcaggagtttgagaccagcctgaccaatatggtgaaaccccatctctactagaaatacaaaaattagccaggcatggtggcacacacctgtagtccaagctactcgggaggctgaggcagaataatcacctgaacccagaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaaaaaag---------aaggacattctgcaatatgtgacagcatggataaagcttgaggacgttaggctaagtgaaaaaaa-gcctgtcacaggacaaacactgcatgattccacttatatgaggtatctaaaatggtgaaatctatggaatcaaagagtagaatggcggttaccagggactgggggagttactaaccagtaggcatcaggtttcagtcaagcgagatgaataagctctagagatctgctgtgcagcattgactctctctagtcaacaattaggcactgcacacttagaaattagttaaggggagagatctctaatgtt--gtcttctATGACAAATTTTTTC-TTTTTTAAAAAGAAGGAGTTTAGAAAAAAATT-TTTTTTAAAACAAATGGAGGTGGAGGTTAGACAGCCA i ponAbe2.chr3 I 11466 C 0 s nomLeu3.chr11 14388010 1055 - 123690457 aaaagacaagtgttagtaaggttgtagagaaatcggaactcttgcacacagttgatggtaatgcaaaatggtgcaggtgcagtcactatgaaaaacagtatggaggtttctcaaaatattagaactagaaccaccatataatccagcatcctacttctggatatttacccagaggaatcgagatcaggatcttaaagagatattagcactcctgcgttcactgcagcactattcacaataggcaagatgtaggaacaaccttaatgtctattgacagatgaatatatgaggagaatgtggtatatatatatagtgaaatactattaagcctttaaaaagaaggacattctggccgggcgcggtggctcgcacctgtaatcccaacactttgggaggctgaggcaggtggatcatgaggtcaggagttcgagaccagcctggccaatatggtgaaatcccatctctactaaaaatacaaaaattagccaggcatggtggcgcatgcctgtagtcc-agctactcaggaggctgaggcagaagaatcacttgaacctggaggcagaggttacagtgagcagagattgtatcactgcactccagcctgggtgacagagtgagactgcatctcaaaaaaaaaaaaaaaaaaaaaaaaaagaaggacattctgcaatatgtgacaacatggataaagcttgaggacattaggctaagtgaaaaaaa-tcctgtcacaggacaa--actgcatgattccacttacatgagatatctaaaatggtgaaatttatggaatctaagagtggaatggcggttaccagggactgggggatttactaaccagtaggcatcggggttcagtcaagcgagatgaataagctctagagatctgctgtgcaacattga--atctctaatcaacaattaggtaatgcacacttagaaattagttaaggagagaga--tctaatgttaagtcttctATGACGAATTTTTTC-TTTTTTAAAAAGAAGGAGGTTAGAAAAAAAATATTTTTTAAAACAAATGGAGGTGGAGGTTAGACGGCCA i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4985749 712 + 91754291 I e papAnu2.chr2 101118964 4742 + 187378091 I e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=247015.000000 s hg38.chr3_KI270781v1_alt 104185 355 + 113034 gcgtggtggctcacgtctgtaatcccaacactttgggaggctgaagcgggtggatcacctgaggttgggagttcaagaccagcctgaccaatatggagaaaccccgtctctactaaatatacaaaattagctgggcatgatggtgggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaactggggaggcggaggttgcagtgagccgagatcatgccatcgcactccagcctggatgacaagagcaaaaactccatctc-------aaaaaaaaaaaaTgtaggtgaaggatatgaacagacacgtctcaaaagaagacatttatgcggccaacaaacatatga s panTro4.chr3 13855419 355 - 202329955 gcgtggtggctcacgtctgtaatcccaacactttgggaggctgaagcgggtggatcacctgaggttgggagttcaagaccagcctgaccaatatggagaaaccccgtctctactaaatatacaaaattagctgggcatgatggtgggtgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaactggggaggcggaggttgcagtgagccgagatcatgccatcgcactccagcctggatgacaagagcaaaaactccatctc-------aaaaaaaaaaaaTgtgggtgaaggatatgaacagacacgtctcaaaagaagacatttatgcggccaagaaacatatga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13837950 362 - 202140232 gcatggtggctcacgcctgtaatcccaacattttgggaggctgaggggggtggatcacctgaggttgggagttcaagaccagcctgaccaacatggagaaaccccgtctgtactaaaaatacaaaattagccgggcatggtggtgggcgcctgtaatcccagctactcaggaggctgaggcaggaatatcacttgaactgggaaggcggaggttgcagtgagccgagatcgtgccatggcactccagcctgaatgacaagagcaaaaactccatctcaaaaaaaaaaaaaaaaaaaagtgagtgaaggatatgaacagacacttctcaaaagaagacatttatgtggccaacaaacatacga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14389065 357 - 123690457 gcatggtggctcacgtctgtaatcccaacactttgggaggctgaggcgggtggatcacctgaggtcgggagttcaagaccagcctgaccaacatggagaaaccccatctctactaaatatacaaaattagttgggcatgatggtggatgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaactggggaggcggaggttgcagtgagccgagatcatgccatcacactccagcctggatgacaagagcaaaaactccatctc-----aaaaaaaaaaaaaaTgtgggtgaaggatatgaacagacatttctcaaaagaagacatttatgcggccaacaaacacatga i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101123706 283 + 187378091 gcgtggtggctcacacctgtaatcccagcactttgggaggctgaggcgggcggatcac--aaggtcaggagatcaagaccatcctggataacatggtgaaaccccatctctactaa--acaaaaaattagctgggcctggtggcgtgcaactgtagtcccagctactcgggaggctgaggcaggaggatggcgtgaacccaggaggtggagcttgtagtgagccaagattgcgccactgcactccagcctgggcga------cagagactctgtctc-------aaaaaaaaaaaa------------------------------------aaga-------------------------- i papAnu2.chr2 I 4742 C 0 e chlSab2.chr15 4985749 712 + 91754291 I e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=182311.000000 s hg38.chr3_KI270781v1_alt 104540 139 + 113034 aaaaaagctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccttctcatgccagttagaatggcgatcattaaaaagtctggaagcaacagatgctggtgaggatgtgaagtaataggaag s panTro4.chr3 13855774 139 - 202329955 aaaaaagctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccttctcatgccagttagaatggcgatcattaaaaagtctggaagcaacagatgctggtgaggatgtgaagtaataggaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13838312 139 - 202140232 aaaaaagctcatcatcattgatcattagagaaatgcaaatcaaaaccacaatgagctaccatctcatgccagttagaatggtgatcattaaaaagtctggaagcaacagatgctggtgaggatgtgaagtagtaggaag i ponAbe2.chr3 C 0 I 11 s nomLeu3.chr11 14389422 139 - 123690457 aaaaaagctcatcatcactagtcattagagaaatgcaaaccaaaaccacaatgagataccttctcatgccagttagaatggcgatcattaaaaagtctggaagcaacagatgctggtgaggatgtgaagtaataggaag i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101123989 138 + 187378091 -gaaaagctcatcaccactggtcattacagaaatgcaaatcaaaaccacaatgagataccttctcatgccagttagaatggcgatcattaaaaagtctggaaacaaaagatgctggtgaggatgtgaagtaataggaat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4986461 139 + 91754291 aaaaaagctcatcatcactggtcattacagaaatgcaaatcaaaactacaatgagataccttctcatgccagttagaatggcgatcattaaaaagtctggaaacaaaagatgctggtgaggatgtgaagtaataggaat i chlSab2.chr15 I 712 C 0 e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=7550.000000 s hg38.chr3_KI270781v1_alt 104679 8 + 113034 gcttttac s panTro4.chr3 13855913 8 - 202329955 gcttttac i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14389561 8 - 123690457 gcttttac i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101124127 8 + 187378091 gcttttac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4986600 8 + 91754291 gcttttac i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13838451 11 - 202140232 I e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=198405.000000 s hg38.chr3_KI270781v1_alt 104687 168 + 113034 actgttggtgggagtgtaaattagttcaatcactgtggaagacagtgtggaaatacctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatacccaaaggaatatgaatcattctactataaagacacatgcacacatacttttt- s panTro4.chr3 13855921 168 - 202329955 actgttggtgggagtgtaaattagttcaatcactgtggaaggcagtgtggaaatacctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatacccaaaggaatatgaatcattctactataaagacacatgcacannnnnnnnnn- i panTro4.chr3 C 0 I 4 s ponAbe2.chr3 13838462 167 - 202140232 actgtt-gtgggagtgtaaattagttcaaccactgtggaagacagtgtggaaattcctcaaggatctagaaccagaaataccatttgacccagtgatcccattactgggtatatacccaaaggattataaatcattctactataaagacacatgcacacgtatgttta- i ponAbe2.chr3 I 11 I 1 s nomLeu3.chr11 14389569 168 - 123690457 actgttggtaggagtgtaaattagttcaatcactgtggaagacagtgtggaaattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactataaagacacatgctcacatatgtttt- i nomLeu3.chr11 C 0 I 1 s papAnu2.chr2 101124135 169 + 187378091 actgtcagtgggagtttaaattagttcaatcactgtggaagacagtgtggaaattcctcaaggatctagaaccagaaacaccatttgacccaccaatcccattactgggtatatacccaaaggattataaataattctattataaagacacatgaacacatatatttat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4986608 169 + 91754291 actgtcagtgggagtttaaattagttcaaccactgtggaagacagtgtggaaatccctcaaggatctagaaccagaaacaccatctgacccaccaatcccattactgggtatatacccaaaggattataaataattctactataaagacacatgaacacatatgtttat i chlSab2.chr15 C 0 C 0 e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=62425.000000 s hg38.chr3_KI270781v1_alt 104855 75 + 113034 tgcagcattatttacaatagcaaagacttggaaccaacccaaatgcccatcaatgatagactggataaagaaaat s ponAbe2.chr3 13838630 75 - 202140232 tgcagcactatttacaatagcaaagacttagaaccaacacaaatgcccatcaatgatagactggataaagaaaat i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 14389738 75 - 123690457 tgcagcactatttacaatagcaaagacttggaaccaacccaaatgcccatgaatgatagactggataaagaaaat i nomLeu3.chr11 I 1 C 0 s papAnu2.chr2 101124304 75 + 187378091 tgcagcactgtttacaatagcaaagacttggtaccaacccaaatgcccaacaatgatagactggataaacaaaat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4986777 75 + 91754291 tgcagcactgtttacaatagcaaagacttggtaccaagccaaatgcccaacaatgatagactggataaacaaaat i chlSab2.chr15 C 0 C 0 e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T e panTro4.chr3 13856089 4 - 202329955 I a score=575704.000000 s hg38.chr3_KI270781v1_alt 104930 478 + 113034 gtggtacatatacaccatggaatactatgcagccataaaaaagaatgagctcatgtcctttgcagggacctggatgaagctgtaaaccatcatcttcagcaaactaacgcaggaacagaaaaccaaacaccacattttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacaccacggcctgttg-gtgggtggggggaaaggggagggagagcattaggacaaatatctaatgcatgtggggcttaaaacctagatgatgggttgataggtgcagcaaaccaccatggcacatgtatacctatgtaacaaacctgcatgttctgcacatgtatcccagaacttaaagtaaaatt-taaaaaaaaaatgaccatatcattttgcatacccttgagcagtatttcagagttcctgtgaccatttctttgtattgttcattttttaaattatt s panTro4.chr3 13856093 476 - 202329955 gtggt-catatacaccatggaatactatgcagccataaaaaagaatgagctcatgtcctttgcagggacctggatgaagctgtaaaccatcatcttcagcaaactaacgcaggaacagaaaaccaaacaccacattttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacaccacggcctgttg-gtgggtggggggaaaggggagggagagcattaggacaaatatctaatgcatgtggggcttaaaacctagatgatgggttgataggtgcagcaaaccaccatggcacatgtatacctatgtaacaaacctgcatgttctgcacatgtatcccagaacttaaagtaaaatt-tttaaaaaaa-tgaccatatcattttgcatacccttgagcagtatatcagagttcctgtgaccatttctttgtattgttcattttttaaattatt i panTro4.chr3 I 4 C 0 s ponAbe2.chr3 13838705 478 - 202140232 gtggcacatatacaccatggaatactatgcagccataaaaaagaatgagctcatgtcctttgcagggacctagatgaagctgtaaaccatcatcttcagcaaacaaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacaccagggcctgttg-gggggtggggggaaaggggagggagagcattaggagaaatatctaacgcacgtggggcttaaaacctagatgacgggttgacaggtgcagcaaaccaccatggcccatgtatacctatgtaacaaacctgcatgttttgcacatgtatcccagaacttacagtaaaatt-aaaaaaaaaaaagacaataccattttgcatacccttgagcagtatatgagggttcctgtgaccatctccttgtattgttcattttttaaattatt i ponAbe2.chr3 C 0 I 71 s nomLeu3.chr11 14389813 477 - 123690457 gtggtacatatacaccatggaatactatgcagccataaaaaagaatgagctcatgtcctttgcagggacctggatgaagctgtaaaccattatcttcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggaattgaacaatgagaacacatggacacagggaggggaacatcacacaccatggcctgttg-gtgggtgggggaaaaggggagggagagcattaggac-attaggtaatgcatgtggggcttaaaacttagctgatgggttgataggtgcagcaaaccaccatggcacatgcatacctatgtaacaaacctgcatgttcagcatatgtaacccagaacttaaagtaaaatt-taaaaaaaaaatgaccataccattttgcgtacccttgagcagtatatgagagttcctgtgaccatttctttgtattgttcattttttaaattatt i nomLeu3.chr11 C 0 I 3 s papAnu2.chr2 101124379 470 + 187378091 gtggcacatctacaccatggaatactatgcagccataaaaaagaatgagctcacgtcctttgcagggacctggatgaagctggaaaccatcatcttcagcaaactaacacaggaacagaaaaccaaacaccacatgtcctcactgataagtgggggttgaacaataagaacacatggacagaaggaggggaacatcacacactggggcctgttgtgggggtggggggaaagaaaagggagagtattaggacaaatatctaatgcatgtgacgcttaaaacctagatgacaggttgataggtgcagcaaaccacgatggcac----------atgtaacaaaactgcatgttcagCGTAtctatcccagaacttaaagtaaaattaaaaaaaaaaaaagaccataccATTTTGCATACTCTTGagcagtatatgagagttccTGTTACCATCTCTTTgtattgttcatttttaagaTTATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4986852 469 + 91754291 gtggcacatctacaccatggaatactatgcagccataaaaaataatgagctcatgtcctttgcagggacctggatgaagctggaaaccatcatcttcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactgataagtgggggttgaacaataagaacacatggacagaaggaggggaacatcacacactggggcctgttgtgggggtggggggaaagaaaagggagagtattaggacaaatatctaatgcatgtgaggcttaaaacctagatgatgggttgataggtgcagcaaaccacgatggcac----------atgtaacaaaactgcatgttcagtgcatctatcccagaacttaaagtaaaatt-aaaaaaaaaaaagaccataccattttgcatactcttgagaagtatatgagagttcctgttaccatctctttgtattgttcatttttaagattatt i chlSab2.chr15 C 0 C 0 e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=24049.000000 s hg38.chr3_KI270781v1_alt 105408 28 + 113034 atcttggacattctaataagcatatagC s panTro4.chr3 13856569 28 - 202329955 atcttggacattctaataagcatatagC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14390293 28 - 123690457 atcttggacattctaataagcatatagC i nomLeu3.chr11 I 3 C 0 s papAnu2.chr2 101124849 28 + 187378091 ACCTCAGACATTCTAATAAGCATATagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4987321 28 + 91754291 acctcagacattctaataagcatatagC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13839183 71 - 202140232 I e macFas5.chr2 103328213 3383 - 192460366 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=17834.000000 s hg38.chr3_KI270781v1_alt 105436 63 + 113034 TAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtATATAT----------------GAGG s panTro4.chr3 13856597 79 - 202329955 TAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatGAGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14390321 62 - 123690457 tatatatatata---------atatatata-atatat-tatatatat---tatatatat---aaaatatatatatGAGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103331596 63 - 192460366 ----tgtgtgtgtgtgtatatgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtATACAT----------ATATATGA-- i macFas5.chr2 I 3383 C 0 s papAnu2.chr2 101124877 50 + 187378091 -----------------aaaaatatgtgtgtgtgtgtgtatgtgtgtgtgtgtatacat----------atatatga-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4987349 40 + 91754291 -----------------AAAAATAtgtgtg----------tgtgtgtgtgtgtATACAT----------ATATATGA-- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13839183 71 - 202140232 I e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=33754.000000 s hg38.chr3_KI270781v1_alt 105499 23 + 113034 TAGACCAtttctttc-------------tttttttt s panTro4.chr3 13856676 23 - 202329955 TAGACCAtttctttc-------------tttttttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13839254 36 - 202140232 TAGACTAtttctttcttttttttttttttttttttt i ponAbe2.chr3 I 71 C 0 s nomLeu3.chr11 14390383 27 - 123690457 TAGACCAtttctttc---------tttctctttttt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103331659 23 - 192460366 TAGACCATTTCTTTC-------------tttctttt i macFas5.chr2 C 0 I 22 s papAnu2.chr2 101124927 23 + 187378091 tagaccatttctttc-------------tttctttc i papAnu2.chr2 C 0 I 12 s chlSab2.chr15 4987389 23 + 91754291 TAGACCATTTCtttc-------------tttctttc i chlSab2.chr15 C 0 I 16 e rheMac3.chr2 103683473 3571 + 192599291 I e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=993047.000000 s hg38.chr3_KI270781v1_alt 105522 431 + 113034 gagatggagtctcactctgtcacccaggctggagtgcagtggtgcaatctcggctttctacaacctctgcctcccaggttcaagtgattctcctgcctcagcctcctcagtagctgggattacaggcatgagccacaa--cacctggctaatttttgtatttttagtagagacagggtttcaccatatcggtcaggatggtctcaaactcctgaccttgtgatctgcccccctcggcctcacaaagtgctgggattacaggcgtgagccactgcgcctggccGGCTTCATTTCTTCCTAACATCTTCACATAGACAGACAAAAGAGGGGACAAAGTCTTAACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAGG-AAAACAAAAAAGAGGTT s panTro4.chr3 13856699 430 - 202329955 gagatggagtctcactctgtcacccaggctggagtgcagtggtgcaatctcggctttctacaacctctgcctcccaggttcaagtgattctcctgcctcagcctcctcagtagctgggattacaggcatgagccacaa--cacctggctaatttttgtatttttagtagagacagggtttcaccatatcggtcaggatggtctcaaactcctgaccttgtgatctgcccccctcggcctcacaaagtgctgagattacaggcgtgagccactgcgcctggccGGCTTCATTTCTTCCTAACATCTTCACATAGACAGACAAAAGAGGGGACCAA-TCTTAACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAGG-AAAAAaaaaaggaggtt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13839290 431 - 202140232 gagatggagtctcactctgtcacccaggctggagtgcagtggtaggatctcggctctctacaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctcagtagctgggattacaggcatgagccacca--cacttggctaatttttgtatttttagtagagacggggtttcaccatataggtcaggatggtctcaaacttcggaccttgtgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccactgcgcccagccCACTTCATTTCTTCCTAACATCTTCACATAGACGGACAAAACAGGGGACAAAGTCTTAACAAAAA-GGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAATATTATAAAAGGAAAAAAaaaaaggaggtt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14390410 431 - 123690457 gagatggagtctcactctgtcacccaggctggagtgcagtggtgcaatctcggctttctacaacctctgcctcccaggttcaagtgattgtcctgccttagcctcctcagtagctgggattacaggcatgagccacaatgcgcctggctaatttttgtatttttagtagacatgcggtttcaccatatcggtcaggatggtctcaaactctggactttgtgatctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggccCACTTCATTTCTTCCTAACATCTTCACATAGATGGACAAAACAGGGGACAAAGTCTTAACAAAAT-GGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAGG--AAAAAAAAAGGACGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687044 429 + 192599291 gagatggagtctcactctgtcacccaggctggagtgcagtggcgcaatctcagctctctacaacctccgcctcccaggttcaagtgagcctcctgcctcagcctcctcagtagctgagatta-aggcatgtgccacaa--tgcctggctaatttttgtgtttttagtagagatggggtttcaccatattggtcagattggtctcgaactcctgatcttatgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgcgcccggGCCACTTCATTTCTTCCTAACATCGTCACATAGATGGACAAAAGAGGGGATAAAGTCTTAACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAG--AAAAAAAAAAGGAGGCT i rheMac3.chr2 I 3571 C 0 s macFas5.chr2 103331704 428 - 192460366 gagatggagtctcactctgtcacccaggctggagtgcagtggcgcaatctcagctctctacaacctccgcctcccaggttcaagtgagcctcctgcctcagcctcctcagtagctgagatta-aggcatgtgccacaa--tgcctggctaatttttgtgtttttagtagggatggggtttcaccatattggtcaggttggtctcgaactcctgatcttatgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgc-cccgggccACTTCATTTCTTCCTAACATCGTCACATAGATGGACAAAAGAGGGGATAAAGTCTTAACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAG--AAAAAAAAAAGGAGGCT i macFas5.chr2 I 22 C 0 s papAnu2.chr2 101124962 428 + 187378091 gagatggagtctcactctgtcacccaggctggagtgcagtggcgcaatctcagctctctacaacctccgcctcccaggttcaagtgagcctcctgcctcagcctcctcagtagctgagatta-aggcatgtgccacaa--tgcctggctaatttttgtgtttttagtagagatggggtttcaccatattggtcaggttggtcttgaactcctgatcttatgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccgctgcgcccgggcCACTTCATTTCTTCCTAACATCGTCACATAGATGGACAAAAGAGGGGATAAAGTCTTAACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAAcagtattataaaag---aaaaaaaaaggaggct i papAnu2.chr2 I 12 C 0 s chlSab2.chr15 4987428 427 + 91754291 gagat---gtctcactctgtcacccaggctggagtgcagtggcacaatctcagctctctacaacctccgcctcccaggttcaagtgagcctcctgcctcagcctcctcagtagctgagatta-aggcatgtgccacaa--tgcctggctaatttttgtgtttttagtagagatgggatttcaccatattggtcaggttggtctcaaactcctgatcttgtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgcgcccggGCCACTTCATTTCTTCCTAACATCGTCACATAGATGGACAAAAGAGGGGATAAAGTCTTCACAAAAATGGTTTTGTAAACACAAACACTGACCAGTGACTATTTTAACAATATGATAAAAACAGTATTATAAAAGA-AAAAAAAAAAGGAGGCT i chlSab2.chr15 I 16 C 0 e canFam3.chr34 24820091 142 - 42124431 I e calJac3.chr15 92439687 13539 - 98464013 T a score=746570.000000 s hg38.chr3_KI270781v1_alt 105953 271 + 113034 AGATaaaaagaattactgagctggaaaattgagctgagagacccttctggaatgcagcatgagaaaagaaaaatataaattaatatatttaagagatatgaaaaatacattctgaagttc-caacatccctctaatggatgttccagaagaagaaaacagaATAG----AATTTTTTa------aatgttaaagttacaaaatagaacagcaactaatataatactatgttaccaccaatcaatactgacaatttat--tgttttactacatgtgcttcaatta s panTro4.chr3 13857129 271 - 202329955 agataaaaagaattactgagctggaaaattgagctgagagacccttctggaatgcagcatgagaaaagaaaaatataaattaatatatttaagagatatgaaaaatacattctgaagttc-caacatccctctaatggatgttccagaagaagaaaacagaatag----aatTTTTTa------aatgttaaagttacaaaatagaacagcaaataatataatactatgttaccaccaatcaatactgacaatttat--tgttttactaaatgtgcttcaatta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13839721 269 - 202140232 agaaaaaaagaattactgagctggaaaattgagctgagagacccttccggaatgcagcattagggaagaaaaatataaattaatatatttaagggatatgaaaaatacattctaaagttc-caatatccctctaatggatgttccagaagaagaaaacagaatagagaTAATTTCT------------TTAAAGTTACAAAATAGAACAGCAAATAATATAATACTATGTTACCACCAATCAATACTGACAATTTAT--TGTTTTACTAAATGTGCTTCAATTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14390841 271 - 123690457 AGAaaaaaagaattactgagctggaaaattgagctgagagacccttctggaatgcagcatgtgggaagaaaaatata----aatatatttaagggatatgaaaaatacattctaaagttc-caacatccctctaatggatgttccagaagaagaaaacagaatagagagaatTTTTTT------Aatgttaaagttacaaaatagaacagtaaataatataatactgtgttaccaccaatcaatactgacaatttat--tgttttactaaatgtgcttcaatta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687473 270 + 192599291 AGAaaaaaagaattactgagctggaaaactgagctgagagacccttctggaatgcagcatgag--aagaaaaatataaattaatatatttaagggatatgaaaaatacattctgaagttc-caacatccctctaatggatgttctagaaaaagaaaacagaatagagagaatTTTTTT------Aatgttaaagttacaaaatagaacagtaaataatataatactatgttaccaccaatcaatgctgacaatttat--tgttttactaaatgtgcttcaa--- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332132 273 - 192460366 AGAaaaaaagaattactgagctggaaaactgagctgagagacccttctggaatgcagcatgag--aagaaaaatataaattaatatatttaagggatatgaaaaatacattctgaagttc-caacatccctctaatggatgttctagaaaaagaaaacagaatagagagaatTTTTTT------Aatgttaaagttacaaaatagaacagtaaataatataatactatgttaccaccaatcaatgctgacaatttat--tgttttactaaatgtgcttcaatta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125390 273 + 187378091 agaaaaaaagaattactgagCTGGAAAACTGAGCTGAGAGACCCTTCTGGAATGCagcatgag--aagaaaaatataaattaatatatttaagggATATGAAAAATACATTCTGAAGTTC-CAACGTCCCTCTAACGGAtgttctagaaaaagaaaacagaatagagagaattttttt------aatgttaaagttACAAAATAGAACAGTAAATAATATAATACTATGTTACCACCAATCAATGCTGACAATTTAT--TGTTTTACTAAATGtgcttcaatta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4987855 273 + 91754291 AGAaaaaaagaattactgagctggaaaactgagctgagagacccttctggaatgcagcatgag--aagaaaaatataaattaatatacttaagggatatgaaaaatacattctgaagttc-caacatccctctaatcgatgttctagaagaagaaaacagaatagagagaatTTTTTT------Aatgttaaagttacaaaatagaacagtaaataatataatactatgttaccaccaatcaatgctgacaatttat--tgttttactaaatgtgcttcaatta i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24820233 275 - 42124431 agcttacaaaaattactgaactggcaaattgggctgagggagtcttttggaaga-------agaaaaggaaaatacaaattagtctatttcagagattgagacaataaaatctgaagttcttaatatccttctaatagatgttccagaggaagaaaacaga--agaggggaTTTtttttaaagaaatgttaaaactacaaaatggaaccaaaactaaaataatactgtgttcccatcagtcagtactgacaatttatactgctttaccagatgtgcttcaagta i canFam3.chr34 I 142 C 0 e calJac3.chr15 92439687 13539 - 98464013 T a score=-6762.000000 s hg38.chr3_KI270781v1_alt 106224 1 + 113034 a--- s panTro4.chr3 13857400 1 - 202329955 a--- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13839990 1 - 202140232 C--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14391112 2 - 123690457 c--t i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103332405 2 - 192460366 a--t i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125663 4 + 187378091 attt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988128 4 + 91754291 attt i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 103687743 0 + 192599291 C e canFam3.chr34 24820508 0 - 42124431 C e calJac3.chr15 92439687 13539 - 98464013 T a score=473363.000000 s hg38.chr3_KI270781v1_alt 106225 162 + 113034 tttttttttttcatgagaccgagtctcactctgtcacccaggctggagtgcggtagcatgatctcggctcactgaaacctccacctcctgggatcaagcgattctcgtgcctcagcctcccatatagctggggttacagatgcacaccaccatgcccagcta s panTro4.chr3 13857401 162 - 202329955 tttttttttttcatgagaccgagtctcactctgtcacccaggctggagtgcggtagcatgatctcggctcactgaaacctccacctcctgggatcaagcgattctcgtgcctcagcctcccatatagctggggttacagatgcacaccaccatgcccagcta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13839991 162 - 202140232 tttttttttttcttgagacagagtctcactctgtcacccaggctggagtgcagtagcgtgatctcggctcactgcaacctccacctcccgggatcaagtgattctcatgcctcagcctcccaagtagctgggattacaggtgcacaccaccatgcccagcta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14391114 162 - 123690457 tttttttttttcttgagacagagtctcgctctgtcacccaggctggagtgcagtagcatgatctcggctcactgcaacctccacctcccgggatcaagggattctcatgcctcagcctcccaagtagctgggattacaggtgcgcaccaccatgcccagcta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687743 153 + 192599291 ---------ttcttgagatggagtctcactctgtcacctaggctagagtgcagtagcatgatctcggctcactgcaacctccacctcccgggatcaagcggttctcgtgcctcagcctcccaagtagctgggattacaggtgcgcaccaccatgcctggcta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332407 162 - 192460366 tttttctttttcttgagatggagtctcactctgtcacctaggctagagtgcagtagcatgatctcggctcactgcaacctccacctcccgggatcaagcggttctcgtgcctcagcctcccaagtagctgggattacaggtgcgcaccaccatgcctggcta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125667 162 + 187378091 tttttttttttcttgagatggagtctcactctgtcacctaggctagagtgcagtagcatgatctcggctcactgcaacctccaccttctgggatcaagcggttctcgtgcctcagcctcccaagtagctgggattacaggtgcgcaccaccatgcctggcta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988132 162 + 91754291 tttttttttttcttgagacggagtctcactctgtcacctaggctagagtgcagtagcatgatctcggctcactgcaacctccacctcccgggattaagcggttctcgtgcctcagcctcccaagtagctgggattacaggtgcgcaccaccatgcctggcta i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92426148 162 - 98464013 ttttttttttttttgagacagggtctccctctgtcacccaggctggagtgcaatggcgggatcttggctctctgtgacctccacctctcggattcaagcaattctcctgcctcagcctcttgagtagctgggattacaggtgcatgccaccacatctggcta i calJac3.chr15 T 13539 C 0 e canFam3.chr34 24820508 0 - 42124431 C a score=9894.000000 s hg38.chr3_KI270781v1_alt 106387 6 + 113034 attttt s panTro4.chr3 13857563 6 - 202329955 attttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13840153 6 - 202140232 agtttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14391276 6 - 123690457 agtttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687896 5 + 192599291 ac-tgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332569 6 - 192460366 acttgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125829 6 + 187378091 acttgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988294 6 + 91754291 acttgt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92426310 6 - 98464013 attttt i calJac3.chr15 C 0 C 0 s canFam3.chr34 24820508 6 - 42124431 actttt i canFam3.chr34 C 0 C 0 a score=203354.000000 s hg38.chr3_KI270781v1_alt 106393 72 + 113034 gagtttttagtagagacagggcttcaccatgttggccaggctggtctcgaactccagacctcaggtgatcct s panTro4.chr3 13857569 72 - 202329955 gagtttttagtagagacagggcttcaccatgttggccaggctggtctcgaactccagacctcaggtgatcct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13840159 72 - 202140232 gtgtttttagtagagacagggtttcaccatgttggccaggctggtctcgaactccagacctcaggtgatccT i ponAbe2.chr3 C 0 I 7 s nomLeu3.chr11 14391282 71 - 123690457 gtgtttttagtagagaca-ggtttcaccatgttggccaggctggtctcgaactccagacctcaggtgatcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687901 68 + 192599291 gtgtttttagtagaca----gtttcaccatgttgaccaggctggcctcaaactccagacctcaggtgatcct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332575 68 - 192460366 gtgtttttagtagaca----gtttcaccatgttgaccaggctggcctcaaactccagacctcaggtgatcct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125835 68 + 187378091 gtgtttttagtagaca----gtttcaccatgttgaccaggctggcctcgaactccagacctcaggtgatcct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988300 68 + 91754291 gtgtttttagtagaca----gtttcaccatgttgaccaggctggcctcgaactccagacctcaggtgatcct i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92426316 72 - 98464013 gtgtttttagtagagatggggttttaccatgttggccaggctggtctcaaactccagacctcaggtgatccg i calJac3.chr15 C 0 C 0 e canFam3.chr34 24820514 0 - 42124431 C a score=154469.000000 s hg38.chr3_KI270781v1_alt 106465 65 + 113034 cctgccttggcctcccaaagtgctgggattacaggcatgaaccactgtgcccagctcaattaatg s panTro4.chr3 13857641 65 - 202329955 cctgccttggcctcccaaagtgctgggattacaggcatgaaccactgtgcccagctcaattaatg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14391353 65 - 123690457 cctgcctcggccttccaaagtgctgggattacaggcatgagccactgtgcccagcttaattaatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103687969 65 + 192599291 cctgcctcggcctcccaaagtgctgggattacaggcatgagccactgtgctcagctcaattaatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332643 65 - 192460366 cctgcctcggcctcccaaagtgctgggattacaggcatgagccactgtgctcagctcaattaatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125903 65 + 187378091 cctgcctcggcctcccaaagtgctgggattacaggcatgagccactgtgctcagctcaattaatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988368 65 + 91754291 cctgcctcggcctcccaaagtgctgggattacaggcataagccactgtgctcagctcaattaatt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92426388 65 - 98464013 cccacctcagcctcccaaagtgctgggactacaggcatgagccatcatgcctggccCAATTAACt i calJac3.chr15 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e canFam3.chr34 24820514 0 - 42124431 C a score=2151125.000000 s hg38.chr3_KI270781v1_alt 106530 828 + 113034 ttttaaaagaaataaaacattacaaacaaggctaatggtcttactgaccccaat-------ctcctccctttcccttagggcagcaaccaccatcataaatttgtatatacttttccaatacaatacacagtataagaatgtatata--atatatatg-----atgcctttgtatgtggctttaagtaataac------atactgtatg---tagggttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----ataaacagccagttaatttctgcacactgctatagaacatttcactgtacaactaactataccacattttt-atatagtgctttatttatagatggacttatgcagtagttccaaatttttaccatcacgaaacaatgaaacaatataat-aatagtacatattgccttctgcacatagatgaaggtt-------------tctccaagtgtatatctagaa---aaattacaaaatgataggatttgcacatttcctattttactagattctgccaaattactcttctatttatacttccacgagcagtatacagctcttcctatttt-ccttatcctcaccaatacttattattttcagactttttagcttttccaatttcataggtgagaaattatacctcactataattttaatttgcatgaccctgatttctgctaaggctgattatcctt-cacggtctattagacatttgggacactttttctgtgaacttcctctttaac-tcttttttctattgcatttatatagtcttttC--TCATACACAAGTTTTTAATTTTTATATAGTCAAATTTATCAACCTGACAAGCCatatat s panTro4.chr3 13857706 828 - 202329955 ttttaaaagaaataaaacattacaaacaaggctaatggtcttactgaccccaat-------ctcctccctttcccttagggcagcaaccaccatcataaatttgtatatacttttccaatacaatacacaatacaagaatgtatata--atatatatg-----atgcctttgtatgtggctttaagtaataac------atactgtatg---tagggttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----ataaagagccagttaatttctgcacactgctatagaacatttcactgtacaactaactataccacattttt-atatagtgctttatttatagatggacttatgcagtagttccaaatttttaccatcacgaaacaatgaaacaatataat-aatagtacatattgccttctgcacatagatgaaggtt-------------tctccaagtgtatatctagaa---aaattacaaaatgataggatttgcacatttcctattttactagattctgccaaattactcttctatttatactgccacgagcagtatacagctcttcctatttt-ccttatcctcaccaatacttattattttcagactttttagcttttccaatttcataggtgagaaattatacctcactataattttaatttgcatgaccctgatttctgctaaggctgattatcctt-cacggtctattagacatttgggacactttttctgtgaacttcctctttaaa-tcttttttctattgcatttatagagtcttttc--tcatACACAAGTTTTTAATTTTTATATAGTCAAATTTATCAACGTGACAAGCCatatat i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14391418 828 - 123690457 ttttaaaagaaataaaacattacagacaaggctaatgctcttactg-ccccaat-------ctcctccctttcccttagggcagcaaccacagtcataaatttgtgtgtacttttccaatacaatacacaatacaagaatgtatata--atacatatg-----atgcctttgtatgtggctttcagtaataac------atactgtatg---tcgggttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----ataaagagcaagttaatttctgcacactgctgtagaacatttcactgtacaactaactataccacattttt-atatagtactttatttataggtggacttaggcagtagttccaaatttttaccatcatgaaacaatgaaacaatataat-aatagtacatatcaccttctgcacatgggcgaaggtt-------------tctccaagtgtatatctagaa---aaattacaaaatgataggatatgcacatttcctattttactagattctgccaaattactcttctatttatacttccacgagcagtatacagctcttcctattttcccttatcctcaccaatacttactattttcagactttttagattttccaatttgataggtgagaaattatacctcactataattttaatttgcgtgactctgatttctgctaaggctgattatcctt-catggtctatcagacatttgggacactttttctgtgaacttcctctttaaa-ttttttttctattgcatttatagagtcttttc--tcatacataagtttttaatttttatatagtcAAATTTATCAACCTGACAAGCtatatat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103688034 822 + 192599291 ttttaaaagaaataaaacattatggacaaggctaacggtcttactgaccctaat-------ctcctccctttcccttagggcagcaaccatcatcataaatttgtatatacttttccaatacaatacacaatacaagaatgtatata--atatatatg-----atggctttgtatgtggctttaagtaataac--------actgtatg---tagggttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----ataaagagtcagttaatttctgcacactgctatagaacatttcactgtac----agctataccacattttt-atatagtgctttatttatagatggacttatgcagtagttccaaatttttaccatcatgaaacaatgaaacaatataat-aatagtacatatcgccttctgcacatgagtgagggtt-------------tctccaagtgtatacctagaa---gaattataagatgataggatatgcacatttcctattttactaaagtctgccaaattactcttctatttatactcccacgagcagtatacggctcttcctattttcccttatcctcaccaatacttattattttcagactttttagcttttccaatctgataggtgagaaattatacctcattataattttaatttgcatgaccctgatttctgctaaggctgattatcctt-catggtctatcagacatttgggacactttttctgtaaacttcctctttaaa-tcttttttctattgcatttatagagtcttttc--tcatacac-agtttttaatttttatatagtcAAATTTATCAACCTGACAAGTGATATAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103332708 822 - 192460366 ttttaaaagaaataaaacattatggacaaggctaacagtcttactgaccctaat-------ctcctccctttcccttagggcagcaaccaccatcataaatttgtatatacttttccaatacaatacacaatacaagaatgtacata--atatatatg-----atggctttgtatgtggctttaagtaataac--------actgtatg---taggtttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----ataaagagtcagttaatttctgcacactgctatagaacatttcactgtac----agctataccacattttt-atatagtgctttatttatagatggacttatgcagtagttccaaatttttaccatcatgaaacaatgaaacaatataat-aatagtacctatcgccttctgcacatgagtgagggtt-------------tctccaagtgtatacctagaa---gaattataagatgataggatatgcacatttcctattttactaaagtctgccaaattactcttctatttatactcccacgagcagtatacggctcttcctattttcccttatcctcaccaatacttattattttcagactttttagcttttccaatctgataggtgagaaattatacctcattataattttaatttgcatgaccctgatttctgctaaggctgattatcctt-catggtctatcagacatttgggacactttttctgtaaacttcctctttaaa-tcttttttctattGCATTTATAGAGTCTTTTC--TCATACAC-AGTTTTTAATTTTTATATAGTCAAATTTATCAACCTGACAAGTGATATAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101125968 822 + 187378091 ttttaaaagaaataaaacattatggaCAAGGCTAACAGTCTTACTGACCCTAAT-------CTCCTCCCTTTCCCTTAGGGCAGCAACCACCATCataaatttgtatatacttttccaatacaatacacaatacaagaatgtatata--atatatatg-----atggCTTTGTATGTGGCTTTAAGTAATAAC--------ACTGTATG---TAGGGTTCTGCAACTAGCTA-TTTTCACTCAGCACTATAAGTTTTGGCTTTCTCCACATTT----ATAAAGAGTCAGTTAATTTCTGCACACTGCTATAGAACATTTCACTGTAC----AGCTATACCACATTTTT-ATATAGTGCTTTATTTATAGATGGAGTTATGCAGTAGTTCCAAATTTTTACCATCATGAAACAATGaaacaatataat-aatagtacatATCGCCTTCTGCGCATGAGTGAAGGTT-------------TCTCCAAGTGTATACCTAGAA---GAATTATAAGATGATAGGATATGCACATTTCCTATCTTACTAAAGTCTGCCAAATTACTCTTCTATTTATACTCCCACGAGCAGTATACGGCTCTTCCTATTTTCCCTtatcctcaccaatacttattATTTTCAGACTTGTTAGCTTTTCCAATCTGATAGGTGAGAAATTATAcctcattatgattttaatttgcatgacCCTGATTTCTGCTAAGGCTGATTATCCTT-CATGATCTATCAGACATTTGGGacactttttctgtaaacttcctctttaaa-tcttttttctattgcatttatagagtcttttc--tcatacac-agtttttaatttttatatagtcaAATTTATCAACCTGACAAGTGATATAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4988433 820 + 91754291 tttttaaagaaataaaacattatggacaaggctaacggtcttactgaccctaat-------ctcctccctttcccttagggcagcaaccaccatcataaatttgtatatacttttccaatacaatacacaatacgagaatgtatataatatatatatg-----atggctttgtatgtggctttaagtaataac--------actgtatg---tggggttctgcaactagcta-ttttcactcagcactataagttttggctttctccacattt----at----agtcagttaatttctgcacactgctatagaacatttcactgtac----aactataccacattttt-atatagtgctttatttatagatggacttatgcagtagttccaaatttttaccatcatgaaacaatgaaacaatataat-aatagtacatatcgccttctgcacatgagtgaaggtt-------------tctccaagtgtatacctagaa---gaattataagatgataggatatgcacatttcctattttactaaagtctgccaaattactcttctatttatactcccatgagcagtatacagctcttcctattttctcttatcctcaccaatacttattattttcagactttttagcttttccaatctgataggtgagaaattatacctcactataattttaatttgcatgaccctgatttctgctaaggctgattatcctt-catggtctatcagacatttgggacactttttctgtaaacttcctctttaaa-tattttttctattGCATTTATAGAGTCTTTTC--TCATACAC-AGTTTTTAATTTTTATATAGTCAAATTTATCAACCTGACAAGTGATATAT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92426453 829 - 98464013 ttttaaaagaaataaaacattacagacaaggctaatggtcttactgaccccaat-------ctcctccctttcccttagggcagcaaccaccatcataaatttgtagatacttttccaatgcaatacacaatataagaatgtgtaca--atgta-atgtagaaatgcccttgtatg-ggctttaagtaataac------ataccatatg---tagggctctgcagctagcta-ttttcactcagcactataagttttggccttctccacatttccagagaaagagccagttaatttctgcacactgctgtggaacatgtcactgtacgactaactataccacattttt-atatagtgttttatttatagacagacttaagcagtagttccaaatttttaccatcatgaaacaatg--------taat-gacagcacgcatcgccttctgcacacgggtgaggatt-------------tctccaagtgtatatctagaa---gaagtacaaaatgataggatgtgcacattttctattttaccagaatctgccaaattactcttttatttatagtccaatgagcagtatacagctcttcctattttcccttatcctcaccaatacttattatttttagactttttagcttttccagtctgatagataagaaatcacaccccactataactttaatttgtatgaccctgatttctgctgaggctgattatcttt-cacagtctgcccgccatttgggatactttttctgtgaatttcctctttaaatttttttttctattgCATTTATAGAGTCTTTTC--TCATACAAAGCTTTTTAACTTTTATATAGTCAAATTTATAAGCCTCACAAGTGATATAT i calJac3.chr15 C 0 I 308 s canFam3.chr34 24820514 814 - 42124431 ttttcaaagaaataaaac--tacagataaggctgatggtccttctgaccccaattccttgccccctccttgttccttagggcagccgttgccatcatgaatttgaatatttctttccagcccgtt-------------atatataca--aaatatatg-----a-ggctttgtaggcagctttaaattttacttacattatagtatatgtactaagtttctgcagttcactatttttcactcaaa---gtatgttttagcgctctcc--------------------agttaattcccctggactgctatagaatctttgcttgcattactgactctaccacatttttaaaagagttctttatttatatatgggcttatgcagtagttccaaatttttgctatcatgaaacaatgaaacaatgtaatgaatgatatgtgt---cttatgcacatgagtgagggctttccaagcgtatatctgcaagcgtatatctagaagtggaattgtagggtgataggatatgcacatgcccaattttactagattctgtcaaattgctcttcactttatactccaacaagcagtatatggct-tccccatgtcctgacagtctcatcaagacttaatattttcagacttg--aattttgacggtctaatggatgagaaattagacctcatcataatttttatttacatggccctgatttctagt-agtttgaccatccttacatagtctgctggccttttgggattccttttctgtgatttgtctctttgaa-tcttttctttttt--aattattgagacattactgtcatataa--------cattatattagattcgggtgtg-caattagtgatttgatattt i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I a score=7840.000000 s hg38.chr3_KI270781v1_alt 107358 4 + 113034 atat s panTro4.chr3 13858534 4 - 202329955 ataa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392246 4 - 123690457 atat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103688856 4 + 192599291 ATAT i rheMac3.chr2 C 0 I 280 s macFas5.chr2 103333530 4 - 192460366 ATAT i macFas5.chr2 C 0 I 32 s papAnu2.chr2 101126790 4 + 187378091 ATAT i papAnu2.chr2 C 0 I 38 s chlSab2.chr15 4989253 4 + 91754291 ATAT i chlSab2.chr15 C 0 I 29 s canFam3.chr34 24821328 4 - 42124431 gtat i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e calJac3.chr15 92427282 308 - 98464013 I a score=-8255.000000 s hg38.chr3_KI270781v1_alt 107362 77 + 113034 ataatgtgtatatatatatataatgtatata---tatataa--tgtatatatatataatgtgtatatatatata------------------CACACACA s panTro4.chr3 13858538 92 - 202329955 a----atgtatatatatata-aatgtatata---tatataaaatgtatatatatataatgtgtatatatatatatatacacacacacacacacacacacG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392250 9 - 123690457 a-----------------------------------------------------------------tatatata-------------------------- i nomLeu3.chr11 C 0 C 0 s canFam3.chr34 24821332 65 - 42124431 atattgtgaaatgaccactacaataagtctaggttaactagactgtcaccacacagt---------tacaaata-------------------------- i canFam3.chr34 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e chlSab2.chr15 4989257 29 + 91754291 I e papAnu2.chr2 101126794 38 + 187378091 I e macFas5.chr2 103333534 32 - 192460366 I e rheMac3.chr2 103688860 280 + 192599291 I e calJac3.chr15 92427282 308 - 98464013 I a score=21731.000000 s hg38.chr3_KI270781v1_alt 107439 21 + 113034 ttttt--ttttttttttgagaca s panTro4.chr3 13858630 23 - 202329955 tttttgtttttttttttgagaca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392259 19 - 123690457 --ttt--tttttttttttagaca i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103333566 21 - 192460366 ttttt--ttgtttgtttgagatg i macFas5.chr2 I 32 C 0 s papAnu2.chr2 101126832 21 + 187378091 ttttt--ttgtttgtttgagatg i papAnu2.chr2 I 38 C 0 s chlSab2.chr15 4989286 21 + 91754291 ttttt--tgttttgtttgagatg i chlSab2.chr15 I 29 C 0 s canFam3.chr34 24821397 21 - 42124431 ttttt--tcttgtgttggaaact i canFam3.chr34 C 0 I 424 e ponAbe2.chr3 13840231 7 - 202140232 I e rheMac3.chr2 103688860 280 + 192599291 I e calJac3.chr15 92427282 308 - 98464013 I a score=265670.000000 s hg38.chr3_KI270781v1_alt 107460 219 + 113034 gagtcttgctctgtcacccaggctggagtgcagtggccccatctcagatcaccacaagctccgcctcccaggttcacgccattctcttgcttcagcctcccgagtagctgagactacaggcgcccaccaccacgtccagctaattttttgtatttttagtaaagatggggtttcaccgtgttagtctcgat--ctcctgacctcatgatccatccgcttca s panTro4.chr3 13858653 219 - 202329955 gagtcttgctctgtcacccaggctggagtgcagtggccccatctcagatcaccacaagctccgcctcccgggttcacgccattctcttgcttcagcctcccgagtagctgagactacaggcgcccgccaccacgtccagctaattttttgtatttttagtaaagatggggtttcaccgtgttagtctcgat--ctcctgacctcatgatccacccgcctca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392278 219 - 123690457 gagtcttgctttgtcacccaggctggagtgcagtggccccatctcggctcaccacaagctctgcctcccaggttcatgccattctcttgcttcagcctcccgagtagctgagactacaggcgcctgccaccacatccagctaattttttgtatttttagcagagatggggtttcaccatgttagtctcgat--ctcctgacctcatgatccacccacctcg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103333587 221 - 192460366 gagtctcactctgtcacccaggctggagtgtagtggccccatctcgactcactgcaagctctgcctcccaggttcacaccattcttctgcctcagtctcccgagtagctgagactacaggcacccgtcgccacgtccagctaatttttcgtatttttagtagagaccgggtttcaccgtgttagccaggattgctcctgacctcgtgatccacccgtcttg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101126853 221 + 187378091 gagtctcactctgtcacccaggctggagtgcagtggccccatctcgactcactgcaagctctgcctcccaggttcacaccattcttctgcctcagtctcctgagtagctgagactacaggcacccgtcgccacgtccagctaatttttcatatttttagtagagaccgtgtttcaccgtgttagccaggatggctcctgacctcgtgatccacccatcttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4989307 221 + 91754291 gagtctcactctgtcacccaggctggagtgcagtggccccatctcgactcattgcaagctctgcctcccaggttcacaccattcttctgcctcagtctcccgagtagctgagactacaggcacccgtcgccacgtccagctaatttttcgtatttttagtagagaccaggtttcaccgtgttagccaggatggctcctgacctcgtgatccacctgtctcg i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e rheMac3.chr2 103688860 280 + 192599291 I e canFam3.chr34 24821418 424 - 42124431 I e calJac3.chr15 92427282 308 - 98464013 I a score=132831.000000 s hg38.chr3_KI270781v1_alt 107679 76 + 113034 gcctcccaaagtgctgggattacaggcgtgagccaccacgcctggccCGAGTGATATAGTTtttaaagaatagatg s panTro4.chr3 13858872 76 - 202329955 gcctcccaaagtgctgggattacaggcgtgagccaccacgcccagccCGAGTGATATAGTTTTTAAAGAATAGATG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392497 76 - 123690457 gcctcccaaagtgctgcgattacaggcgtgagccaccacgcccagccCGAGCAATATATTTTTTAAAGAATAGATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103689140 76 + 192599291 gcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccCGAGTTATATATTTTTAaaataatagatg i rheMac3.chr2 I 280 C 0 s macFas5.chr2 103333808 76 - 192460366 gcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccCGAGTTATATATTTTTAaaataatagatg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101127074 76 + 187378091 gcctcccaaagtgctgggattacaggtgtgagccaccatgcctggcccaagttatatatttttaaaataatagatg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4989528 76 + 91754291 gcctcccaaagtgctgggattacaagtgtgagccaccatgcctggccCGAGTTATATATTTTTAaaataatagatg i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e canFam3.chr34 24821418 424 - 42124431 I e calJac3.chr15 92427282 308 - 98464013 I a score=326860.000000 s hg38.chr3_KI270781v1_alt 107755 166 + 113034 aataggccaggcgtgctggctcaaggctgtgatcccaacactttgggaagccaagaaaggagaatcccttgaggccagaagttcaagacaagcctgggcaacacagcaagacctcatttctac----aaaa----------------aaaaaa--caaaacgct-gggtgt-ggtggcttgtgcctgtaa s panTro4.chr3 13858948 168 - 202329955 AATAggccaggcgtgctggctcaaggctgtgatcccaacactttgggaagccaagaaaggaaaaccccttgaggccagaagttcaagacaagcctgggcaacacagcaagacctcatttctac----aaaa----------------aaaaaaaacaaaacgct-gggtgt-ggtggcttgtgcctgtag i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 14392573 183 - 123690457 AGTAggccaggcgtgctggctcaaggctgtgatcccaacactttgggaagccaagaaaggagaatcccttgaggccagaagttcaagacaagcct-ggcaacacagcaagacctcatctctac----aaaacaaaacaaaacaaaacaaaaaa--aaaaacgctggggtgcgggtggcttgtgcctgtag i nomLeu3.chr11 C 0 I 1 s rheMac3.chr2 103689216 165 + 192599291 aataggccaggcatgctggctcaaggctgtaatcccaacactttgggaagacaagaaaggagaattcct------cagaagttcaagacaagcctgggcaacacagcaagacctcatctctac----aaaa-----------aaataaataaa--taaatagct-gggtgt-ggtggcttgtgcctgtag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103333884 171 - 192460366 aataggccaggcatgctggctcaaggctgtaatcccaacactttgggaagacaagaaaggagaattccttgaggccagaagttcaagacaagcctgggcaacacagcaagacctcatctctac----aaaa-----------aaataaataaa--taaatagct-gggtgt-ggtggcttgtgcctgtag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101127150 175 + 187378091 aataggccaggcatgctggctcaaggctgtaatcccaacactttgggaagacaagaaaggagaatcccttgaggccagaagttcaagacaagcctgggcaacacaacaagacctcatctctacaaataaat-----------aaataaataaa--taaatagct-gggtgt-ggtggcttgtgcctgtag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4989604 171 + 91754291 aataggccaggcatgctggctcaaggctgtaatgccaacactttgggaagacaagaaaggagaatcccttgaggccagaagttcaagacaagcctgggcaacacagcaagacctcatctctac----aaat-----------aaataaataaa--taaatagct-gggtgt-ggtggtttgtgcctgtag i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92427590 166 - 98464013 aaaaggccaggcacagtggctcaagcctgtaatcccagcactttgggaggccgaggcgggtggatcac--gaggtcaagagatcaagaccatcctggtcaacatggtgaatccccgtctctac----taaa-----------aa---tacaaa--aaattagtg-gggcat-ggtggtacgtgcctgtag i calJac3.chr15 I 308 C 0 e ponAbe2.chr3 13840231 7 - 202140232 I e canFam3.chr34 24821418 424 - 42124431 I a score=277435.000000 s hg38.chr3_KI270781v1_alt 107921 104 + 113034 tcccagctacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagtgacccatgatggcgccactgcactccagcctgggtgac-aga s panTro4.chr3 13859116 104 - 202329955 tcccagctacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagtgacccatgatggcgccactgcactccagcctgggtgac-aga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13840238 104 - 202140232 tcccagctacttggg--aggctgagg--tgggagga-ctgcttgag--cctgtgaagttgaggctgcagtgacccatgacggcaccactgcactccagcctgagtgac-aga i ponAbe2.chr3 I 7 C 0 s nomLeu3.chr11 14392757 111 - 123690457 ccccagctacttggggagggctgagggtggggaggatttgctttaagccctgggaggttgagggtgcagtgagccatgatggcatcattgctctccagcctgggtgac-aga i nomLeu3.chr11 I 1 C 0 s rheMac3.chr2 103689381 104 + 192599291 tcccagccacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagttagccatgatggcaccactgcactggtgcctgggtgac-aga i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103334055 104 - 192460366 tcccagccacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagttagccatgatggcaccactgcactggtgcctgggtgac-aga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101127325 104 + 187378091 tcccagccacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagttagccatgatggcaccactgcactggtgcctgcgtgac-aga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4989775 104 + 91754291 tcccagccacttggg--aggctgagg--tgggagga-ttgcttgag--cctgggaggttgaggctgcagttagccatgatggcaccactgcactggtgcctgggtgac-aga i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92427756 105 - 98464013 tcccagctactcagg--aggctgagg--caggagaa-ttgcctgat--cccaggaggcagaggttgcagtgagccgagatcgcgccattgcactccagcctgggttacaaga i calJac3.chr15 C 0 C 0 e canFam3.chr34 24821418 424 - 42124431 I a score=2413844.000000 s hg38.chr3_KI270781v1_alt 108025 776 + 113034 gtgagacccattctc-aaaaaacaaaaagaataaatgaatatttctcaaacccaaagaaaaatgcgagtctttagaattgagagggtgcacttgatgttaagcaggatgaatgcaataaacatccat----tgagatgcagtgtagtgaaatttcagaatatGATTG--AGAGTTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTG-TTTTTGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTCTGGGCACTGGGAAAATCTAGCAAGGAAACCAGGAAGGTCTTGAGCATTCACAGGTCTTGAG---CTGTC--------------GATCGTGGCTGCTTTACAACTCACCAGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCGGAGCACGGATGGAAACATTTTGTTGTTACTGCTGTTTTGTTTTGTCTAACACAATAACTAGCAATGGAGAGGTTGCAAAGCATTGTTTACATAtttggatgaatcattagaaactgctatttttgtagagtaaaaaatggttgaatgttagg--gattt-ctagggttgaacctaaTAGataattttattacatactcttaaccctatgagatacacattattacta------------------------------tcaactgttttacagatgaccagctagtagggcagagagc----ttaagtctgtccat-ggggccacatgacttctaagaggcagaagccagCCTGCCTGGTTCCATCTCCTGGCCTGATTC-TT-----------------GGGTAGCACTGCCGCTGTCTGGAACAGAG-AAAAAAA------C--ATGGCATGTTCTTCTCTCT--- s panTro4.chr3 13859220 776 - 202329955 gtgagacccattctc-aaaaaacaaaaagaaTCAATgaatatttctcaaacccaaagaaaaacgcgagtctttagaattgagagggtgcgcttgatgttaagcaggatgaatgcaataaacatccat----tgagacgcagtgtagtgaaatttcagaaTATGATTG--AGAGTTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTG-TTTTTGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTCTGGGCACTGGGAAAATCTAGCAAGGAAACCAGGAAGGTCTTGAGCATTCACAGGTCTTGAG---CTGTC--------------GATCGTGGCTGCTTTACAACTCACCAGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCGGAGCATGGATGGAAACATTTTGTTGTTACTGCTGTTTTGTTTTGTCTAACACAATAACTAGCAATGGAGAGGTTGCAAAGCATTGTTTACATAtttggatgaatcattagaaactgctatttttgtagagtaaaaaatggttgaatgttagg--gattt-ctagggttgaacctaaTAGataattttattacatactcttaaccctgtgagatacacattattacta------------------------------tcaactgttttacagatgaccagctagtagggcagagagc----ttaagtctgtccat-ggggccacatgacttctaagaggcagaagccagCCTGCCTGGTTCCATCTCCTGGCCTGATTC-TT-----------------GGGTAGCACTGCCGCTGTCTGGAACAGAG-AAAAAAA------C--ATGGCATGTTCTTCTCTCT--- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13840342 786 - 202140232 gtgagacccagtctcaaaaaaacaaaaagaataaaTgaatatttctcaaacccaaagaaaaatgcgagtctttagaattgagagggtgcacttgatgttaagcaggatgaatgcaataaatatctat----tgagacacagtgtagtgaaatttcagaataTGATTG--AGAGTTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTG-TTTTTGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTGTGGGTACTGGGAAAATCTAGCAAGGAAACCAGGAAGGTCTTGAGCATTCACAGGTCTTGAG---CTGTC--------------GATCGTGGCTACTTTACAACTCACCAGGCTCCTTGAGAAGATATTCCTGGAAACAGAATTCTGGAGACTCATTATTTGGAGCATGGATGGAAACATTTTGTTGTTACTGCTGTTTTGTTTTGTTTGACACAATAACTAGCAATGGAGAGGTTGCAAAGCATTGTTTACATAtttggatgaatcattagaaactgctatttttgtagagtaaaagatggttgaatgtgagg--gatttcctagagttgaacctaaTAGAtaa-tttattacatactcttaaccctgtgagatacacattattacta------------------------------tcaactgttttacagatgaccagccagtagggcagagagc----ttaagtctgtccat-ggggccacatgacttctaagcggcagaagccagcctgcctggttccaactcctggcctgattc-tt-----------------gggtagcgctgccgctGTCTGGTACAGAG-AAAAAAGCATGGCC--ATGGCATGTTCTTCTCTCT--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14392868 777 - 123690457 gtgagacccagtctc-agaaaacaaaaagaataaaTGGATatttctcaaacccaaagaaaaatgcgagtctttagaattgagagggtgcacttgatgttaagcaggatgaatgcaataaatatctat----taagacacagtgtagtgaaatttcagaaTATGATTG--AGAGTTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTG-TTTTTGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTCTGGGTACTGGGAAAATCTAGCAAGGGAACCAGGAAGGTCTTGAGCATTCACAGGTCTTGAG---CTGTC--------------GATCATGGCTACTTTACAACTCACCAGCCTCCTTG---AGACATTCCTGGAAATAGAATTCTGGAGACTCATTATTCGGAGCATGGATGGAAAAATTTTGTTATTACTGCTGTTTTGTTTTGTTTAACACAATAACTAGCGATGGAGaggtcgcaaagcattgtttacatatttggatgaatcattagaaactgctatttttgcagagtaaaaagtggttgactgttagg--gatttcctagggttcaacctaatagataattttattacatactcttaaccctgtgagatacacattattacta------------------------------tcaactgttttacagatgaccagccagtagggcagagagc----ttaagtctgtccat-gaggccacatgacttctaagaggcagaagccagCCTGCCTAGTTCCATCTCTTGGCCTGATTC-TT-----------------GGGTAGCACTGCCCCTGTCTGGAACAGAG-AAAAAAA------C--ATGGCATGTTCTTCTCTCT--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103689485 771 + 192599291 gcaagatccagtctc-aaaaaacaaaaagaataaatgaatatttctcaaacccaaagaaaaatgcgagtccttagaattgagagggtgcacctggtgttaagcaggatgaatacaatcaatacctat----t-agacacagtgtagtgaaatttcagaaTATGATTG--AGAGGTTTTTGTGTTTGAGGCACA-----------GGTT------------GTACTTGCTTTTCGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTCTGAGTACGGGGGAGATCTAGCAAGGGAACCAGGAAGGTCTTGAGCATTCACAGGCCTTGAG---CTGTT--------------GATCATGGCAACTTTACAACTCACCAGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCTGAGCATGGATGGAAAAATTTTGTTGTTACTGCTGTTTTGTTTCGTTTAACACAATAACTAGCAATGGAGAGGTCGCAAAGCATTTTTTACATAtttggatgaatcattagaaactt---tttttgtagcgtaaaaaatggttgagtgttagg--gatttcctagagttcaacctaaTAGACAattttattacatactcttaaccctgtgagatacacagtattacta------------------------------tcgactgttttacaggtgaccagccagtagggcagagagc----tgaagtctgtccat-ggggccacatgacttctaagaggcagcagccagcctgcctggttccatcttccggcctgattc-tt-----------------gggtaacactgcccctGTCTGGAACAGAG-AAAAAAA------C--ATGTCATG---TTCTCTCT--- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103334159 771 - 192460366 gcaagatccagtctc-aaaaaacaaaaagaataaatgaatatttctcaaacccaaagaaaaatgcgagtccttagaattgagagggtgcacctggtgttaagcaggatgaatacaatcaatacctat----t-agacacagtgtagtgaaatttcagaaTATGATTG--AGAGGTTTTTGTGTTTGAGGCACA-----------GGTT------------GTACTTGCTTTCCGCAGTGAGGCCCAGAAGAGAGACAGTGAGCTCTCTGAGTACGGGGGAGATCTAGCAAGGGAACCAGGAAGGTCTTGAGCATTCACAGGCCTTGAG---CTGTT--------------GATCATGGCAACTTTACAACTCACCAGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCTGAGCATGGATGGAAAAATTTTGTTGTTACTGCTGTTTTGTTTCGTTTAACACAATAACTAGCAATGGAGAGGTCGCAAAGCATTTTTTACATAtttggatgaatcattagaaactt---tttttgtagcgtaaaaaatggttgagtgttagg--gatttcctagagttcaacctaaTAGACAATTTTATTACATACTCTTaaccctgtgagatacacagtattacta------------------------------tcgactgttttacaggtgaccagccagtagggcagagagc----tgaagtctgtccat-ggggccacatgacttctaagaggcagcagccagCCTGCCTGGTTCCATCTTCCGGCCTGATTC-TT-----------------GGGTAACACTGCCCCTGTCTGGAACAGAG-AAAAAAA------C--ATGTCATG---TTCTCTCT--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101127429 771 + 187378091 gcaagatccagtctc-aaaaaacaaaaagaataaatgaatatttctcAAATCCAAAGAAAAATGCGAGTCCTTAGAATTGAGAGGGTGCACCTGGTGTTAAGCAGGATGAATACAATCAATACCTAT----T-AGACACAGTGTAGTGAAATTTCAGAATATGATTG--AGCGGTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTGCTTTTCGCAGTGAGGCCCAGAAGAGAGCCAGTGAGCTCTCTGAGTACTGGGGAGATCTAGCAAGGGAACCAGGAAGGTCTTGAGCATTCACAGGCCTTGAG---CTGTT--------------GATCATGGCAACTTTACAACTCACCAGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCTGAGCATGGATGGAAAAATTTTGTTGTTACTGCTGTTTTGTTTCGTTTAACACAATAACTAGCAATGGAGAGGTCGCAAagcattttttacatatttggaTGAATCATTAGAAACTT---TTTTGGTAGCGTAAAAAATGGTTGAGTGTTAGG--GATTTCCTAGAGTTCAACCTAATAGACAATTTTATTACATACTCTTAACCCTGTGAGATACATAGTATTACTA------------------------------TCGACTGTTTTACAGGTGACCAGCCAGTAGGGCAGAGAGC----TGAAGTCTGTCCAT-GGGGCCACATGACTTCTAAGAGGCAGCAGCCAGCCTGCCTGGTTCCACCTTCCGGCCTGATTC-TT-----------------GGGTAACACTGGCCCTGTCtggaacagag-aaaaaaa------c--atgtCATG---TTCTCTCT--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4989879 772 + 91754291 gcaagatccagtctc-aaaaaacaaaaagaataaatgaatatttctcaaacccaaagaaaaatgcgagtccttagaattgagagggtgcacctggtgttaagcaggatgaatgcaatcaatacctat----t-agacacagtgtagtgaaatttcagaaTATGATTG--AGAGGTTTTTGTGTTTGAGGCACA-----------GGTT------------GTGCTTGCTTTTCGCAGTGAGGCCCAAAAGAGAGACAGTGAACTCTCTGAGTACTGGGGAGATCTAGCAAGGGAACCAGGAAGGTCTTGAGCATTCATAGGCCTTGAG---CTGTT--------------GATCATGGCAACTTTACAACTCACCCGGCTCCTTG---AGACATTCCTGGAAACAGAATTCTGGAGACTCATTATTCTGAGCATGGATGGAAAAATTTTGTTGTTACTGCTGTTTTGTTTCGTTTAACACAATAACTAGCAATGGAGAGGTTGCAAAGCATTTTTTACATAtttggatgaatcattagaaactt---tttttgtagcgtaaaaaatggttgagtgttagg--gatttcctagagttcaacctaaTAGACAattttattacatactcttaaccctgtgagatacacattattacta------------------------------tcgactgttttacaggtgaccagccagtagggcagagagc----tgaagtccgtccat-ggggccacatgacttctaagaggcagcagccagCCTGCCTGGTTCCATCTTCCGGCCTGATTC-TT-----------------GGGTAACACTGCCCCTGTCTGGAACAGAGAAAAAAAA------C--ATGTCATG---TTCTCTCT--- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92427861 788 - 98464013 gcgaaactccatctc-aaaaaaaaaaaagaaTAGATTAATATTTCTCAAACTCAAAGAAAACTGGGAGTCCTT-GAATTGAGAGGGTGCACCTAGTGTTATGTGGGATGAATACAGCAAGTATCTAC----TGAGACACAGTGCAGTGAAATTTCAGAACACGACTG--AGAGCTTTTTGTGTTTGGGGCAGT-----------GGTCAGGGAGGACTTGGTGCTTGCTTTCTGCAGTGAGACCCAGAAGAGTGACAGAGAGCTCTCTGGGTACTGGGAACATCTATC-AGGGAACGAGAAAGGTCTTGCGCATTCTCGGGTCTTGAGCGTCGGTC--------------GGTCGTGGCTACTTTACAGCTCACCAGGCCCCTTG---AGACATTCCTGGAATCAGAATTCTGGAGACTCGTTGTG-GGAGGGTGGATGGAAAACCTTTGTTGTTACTGTTG-TTTGTTTTGTTCAACACAGTCACTAGCAGTGTAGAGTTCACAAAGCGTTGCTGACATATCTGGACGAACCATTGGACGCTA---GTTCTGTAGAGTGAAAAATGAGTGAACGTTAGGGCGATTTCCCGGGTTTCAGCCTAATAGATAACTtccttacagactcttaaccctgtgagacacatgttattacga------------------------------tcaactgttttacagatgaccagtcagtggggcagagagt----ttaagtctgtccatgggggccacatgactcctaagaggcagaagtgagcctgcctggttccgtctcctggcctcattcttt-----------------gGGTAGCACTGCCCCGGCCTGGAACACAC-ACAAAAA------CAAATGTCATG---TTTTC-AT--- i calJac3.chr15 C 0 C 0 s canFam3.chr34 24821842 804 - 42124431 GCAAGAGTTATTTtt---------taaagaatggatgagtatttgtcaaacctc---aaaaacccaagtcctcagaattgagaggatataccaagctttaagcaggatgaatataataaatgtccatgtaattggacacattatgatgaaacttccaaatatGATTGTAGGAGGGTGTTGTGTTTGGGGTAGAAAGGGCTAGTGGTTT------------GTACTAG-TGTTTGCTGTAAGA-CCAGAGGAGTGAGAGGGAGCTCTCTGGCTACCGGG-----------------------AGACCTTGCGCATTGGCTGGTCTCGAG---TCGTCTGTCTGCCAGGCAGGGCCCTGGCTACTTTACAAATCACCAGTGCCTTTG---AGCGGGTCCTGCAAACAGAATTCTGGAGACTCATTAG--GGAACATGGATGGAAGGCT-----------------TTTGTTTTGTTTAAAACAATAACTAACAATTTAGACTTCACAAAATATTGTTTACATAttagggcaaaccatctgaaattgccatttttggacagtaaaaaatgattgaatgttggc--tatttcctaggattcaatctaGCACACGATTTCCTTTCAGACCCTCAATTCAGGGAGATACACATTATTATTAAAAttttttttttttttttttttttttttttttttttttttGCAGATGAGCAACCATTGGAGCAGGGAGCTTAATTAAGTCTGCCAAT-GAGGCCTTGTAACACCTCACTGGTCCAAGTGAGTGTGTCTGGCTCCATCCTGCCACCAGGACT-CTGGTGGGAAAAACTCTGGGGGCAGCACCGCCCCCACCTGG-GCAATG-GGAAAAA------C--ACTTCATG---TTCTCTCCCCT i canFam3.chr34 I 424 I 29 a score=961056.000000 s hg38.chr3_KI270781v1_alt 108801 333 + 113034 CTCAGGATAGTATCCATCAGGGAGGTTATCTGACttctttgtttt--------------tgtttttgagacggagttttgctc-tgttgcccaggctggagtgcaatggcgcgatcttggctcacaacaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctaggattacaggctcccactgccatggctaatttttgtatttttagtagggacagggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccaccacacccggccCAT s panTro4.chr3 13859996 332 - 202329955 CTCAGGATAGTATCCATCAGGGAGGTTATCTGACttctttgtttt--------------tgtttttgagacggagttttgctc-tgttgcccaggctggagtgcaatggcgcgatcttggctcacaacaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctaggattacaggctccca-tgccatggctaatttttgtatttttcgtagggacagggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatctgcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccacacccggccCAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13841128 333 - 202140232 CTCAGGATAGTATCCATCAGGGAGGTTGTCTGACttcttcgtttt--------------tgtttttgagatggagtctcactc-tgttgcccaggctggagtgcaatggcgcaatcttggctcacagcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctaggattacaggctcccaccgccatggctaatttttgtatttttagtagggacagggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatctgcctgcctcagcctcccaaagcgctgggattacaggtgtgagccaccacacccggccCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14393645 333 - 123690457 CTCAGGATAGTATCCATCAGGGAGGTTATCTGACttctttgtttt--------------tgtttttgagatggagttttgctc-tgttgcccaggctggagtgcaatggcgcgatcttggctcacagcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctaggattacaggctcctgcagccatggctaatttttgtatttttagtagagacagggtttcaccatgttggccacgctggtcttgagctcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaagtgtgagccaccacaccccgccCAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103690256 332 + 192599291 CTCAGGATAGTATCCATCAAGGAGGTTATCTCACTTCTTAGtttt--------------tgtttttgagacggaattttgctc-tgttgcccaggctagagtgcaatggtgcgatcgtggctcactgcaacctctgtctccagggttcaagtgattctcctgcctcagccttccgagtagctgggattacaggcacccaccgccatggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatccacccgcctcagcctcccaaagtgctgggatta-aggtgtgagccaccacgcccagccCCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103334930 332 - 192460366 CTCAGGATAGTATCCATCAAGGAGGTTATCTCACTTCTTAGtttt--------------tgtttttgagacggaattttgctc-tgttgcccaggctagagtgcaatggtgcgatcgtggctcactgcaacctctgtctccagggttcaagtgattctcctgcctcagccttccgagtagctgggattacaggcacccaccgccatggctaatttttgtatttttagtagagatggggtttcaccatgttgggcaggctggtcttgagctcctgacctcaggtgatccacccgcctcagcctcccaaagtgctgggatta-aggtgtgagccaccacgcccagccCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101128200 333 + 187378091 CTCAGGATAGTATCCATCAAGGAGGTTATCTCacttctcagtttt--------------tgtttttgagactgaattttgctc-tgttgtccaggctagagcgcaatggtgcgatcgtggctcactgcaacctctgtctccagggttcaagagattctcctgcctcagcctcccgagtagctgggattacaggcacccaccgccatggctaatttttgtatttttagtagagacgggatttcaccatgttggccaggctggtcttgagctcccgacctcaggtgatctgcccacctcaacctcccaaagtgctggaattacaggtgtgagccaccacacccagcccct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4990651 333 + 91754291 CTCAGGATAGTATCCATCAAGGAGGTTATCTCACTTCTTAGtttt--------------tgtttttgagatggaattttgctc-tgttgcccaggctagagcgcactggtgcgatcttggctcactgcaacctctgtctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccgccatggctaatttttgtatttttagtagagacagcgtttcaccatgttggccaggctggtcttgagctcctgacctcaggtgatccacccgcctcggcctcccaaagtgttggaattacagatgtgagccaccacacccagccCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92428649 340 - 98464013 CTCAGGATCGAATCCATCAGGGAGGTTATCTGACTTCTCTGCttttgtttttgtttctgtgtttttgagac--agtttcgctcttgttgcccaggccagagtacaataacacaatcttggcaca-tgcaacctctgcctcccgggttcaagtgatcctcctgcctcagcctcccaagtagctgggattacaggtactcaccaccacggctaatttttttatttttagtggagacag--tttcaccatgttggctaggatggtctcgagctcctgacctccggtgatccacccacctcagcctcccaaa-tgctgggattacaggtgtgagccaccacgcccag--cAT i calJac3.chr15 C 0 C 0 e canFam3.chr34 24822646 29 - 42124431 I a score=1333240.000000 s hg38.chr3_KI270781v1_alt 109134 399 + 113034 CTGACTTCTAGGGAAATTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGACAAACATCCTTCAAGGAATAATCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGACTGGGGCAGT-GAAACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCTTTGCACCATAATTATTCAGAATAGGACACcctccccagcctggatgccaatttcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgcttttagttgcaaacgcagtctcaagccagaaat--tggaactttaatgtgaggtattcatcaa s panTro4.chr3 13860328 399 - 202329955 CTGACTTCTAGGGAAATTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGACAAACATCCTTCAAGGAATAATCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGACTGGGGCAGT-GAGACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCTTTGCATCATAATTATTCAGAATAGGACACcctccccagcctggatgccaatttcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgcttttagttgcaaacgcagtctcaagccagaaat--tggaacgttaatgtgaggtattcatcaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13841461 399 - 202140232 CTGACTTCTAGGGAAATTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGACAAACATCCTTCAAGGAATAATCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGACTGGGGCAGT-GAGACAAAGAGCTACTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCTTTGCATCATAAttattcagaatgggacaccctccccagcctggatgccaatttcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgctttcagttgcaaacgcagtctcacaccagaaat--tggaacattagtgtgaggtattcatcaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14393978 398 - 123690457 CTGACTTCGAGGGAAATTAGGCTCAAGATAATCAGTGGTAAGAAGTGGTGTTTGCTAAGAGAACTTGACCTTGATATTCAGACACACATCCTTCAAGGAATAATCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGCACCAAAGACCATCAGGTGAGTGGGGCAGT-GAGACAAAGACCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCTTTGCATCATAATTATTCCGAATGGGACAccctccccagtctggatgccaattgcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgcttttagttgcaaacgcggtctcaagccagaaat--tggaac-ttaatgtgaggtactcatcaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103690588 399 + 192599291 CTGACTTCTAGGGAACTTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGATAAACATCCTTCAAGGAATAACCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGAGTGGAGCAGT-GAGACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCCTTGCATCATAAttgttcagaatgggactccctccccagcctggatgccaatttcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgcttttagttgcaaacacagtctcaagtcagaaat--tggaatgttaatgtgaggtattcatcaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103335262 399 - 192460366 CTGACTTCTAGGGAACTTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGATAAACATCCTTCAAGGAATAACCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGAGTGGAGCAGT-GAGACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCCTTGCATCATAAttgttcagaatgggactccctccccagcctggatgccaatttcagcaggcctgagatttttctgctcatgcttagaata--gtctgtggttgcttttagttgcaaacacagtctcaagtcagaaat--tggaatgttaatgtgaggtattcatcaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101128533 399 + 187378091 ctgACTTCTAGGGAACTTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGATAAACATCCTTCAAGGAATAACCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGAGTGGAGCAGT-GAGACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGTGTGCTATTTCCTTGCATCATAATTGTTCAGAATGGGACACCCTCCCCAGCCTGGATGCCAATTTCAGCAGGCCTGAGATTTTTCTGCTCATGCTTAGAATA--GTCTGTGGTTGCTTTTAGTTGCAAACACAGTCTCAAGTCAGAAAT--TGGAATGTTAATGTGAGGTATTCATCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4990984 399 + 91754291 CTGACTTCTAGGGAACTTAGGCTCAAGATAATCAGTGGTAAGAAGTGGCGTTTGCTAAGAGAACTTGACCTTGATATTCAGATAAACATCCTTCAAGGAATAACCTATGAGCTAGAGAA-------------AGAGTAGTCTGTGAACCAAAGACCATCAGGTGAGCGGAGCAGT-GAGACAAAGAGCTATTGCTGTGCGTGTCCCAGCTGCCAAGCTGCTGAGCCTTAAGTAACCAGCGTGCTATTTCCTTGCATCATAATTGTTCAGAATGGGACACcctccccagcctggatgccaatttcagcaggcctgagatttttctgctcgtgcttagaata--gtctgtggttgcttttagttgcaaacacagtctcaagtcagaaat--tggaatgttaatgtgaggtattcatcaa i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92428989 381 - 98464013 CTGACT----------------TCAAGGTAATCAGTGGTAAGAAGTGGCATTTGCTAAGACAACTTGACCTTGATATTCAGACAAACATCCTTCAAGGAATAATCTACAAGCTAGAGAA-------------AGAGTACACTGTGCACC-AAGCCCGTCAGGTGAGTGGGGCAGT-GAGACAAGGACCTACTGTTGTGCATGTCCCAGCGGCCATGCTGCTGAGCCGTAAGTAACCAGTGTGCTATTTCCTTGCATCATAAttattcagaacggggcaccttccccagcctggataccaatttcagcaggcctgagatttttctgcacatgcttagaata--gtctgtggttgctcttagctgcaaacacagtctcaagtcagaaat--tggaatgtta-tgtgaggtattcatcaa i calJac3.chr15 C 0 I 326 s canFam3.chr34 24822675 374 - 42124431 CTCTCTTCTAGGGAGATCAAGATCATGATAATCAGTGGCAAGAACTGTCTCTAGCCAAAAGAAGTTGACCCTCACATTCTGAC-CACATGCTTC-AGACATAACCTATGAGCTGGAGAGATGCGTCAGGGCCAGAGGGCACGGTGAACTGGAGCCTATCCTGTGAGTG----AGTGGGGAAGGGGGGCTATGGTTGTGTGTGTCCCA--TGGCTAACCACCGTGCCCCAA-----CAGAG--------CCTTTCACCAAAAGCATTCCAGGAGGGA--ccctacc--gcctggatgacaactctagcaggcctgatatctttc------ttcttgggacagggtctgtggttgc------------aaacagtctcagctgagacctgagagaatactaatgcaaggtattcatcaa i canFam3.chr34 I 29 C 0 a score=1891800.000000 s hg38.chr3_KI270781v1_alt 109533 607 + 113034 aactctgagcttatttttaccttacatccttctctcttcccccagcttgtgcctggccagctgggaacctccagtggacacaatggagagggctttg--tcttctctctcgttccacttggcctccccGAGCCAGTTACCATAG---------------------------------------------------------AATTGGCTTCAGACTGTCTTGGCAGGCAGATGTTAAATTTTGCCTCTTTTTCATGGAGTGATTTTACACCCCCTCCACTCAAGTTACCGGCTGAGTGCCGCCTCAG---CCTTTCTCCCAAAATCCTCTTTTATCTATGGATGTGTCTCAAGTCCAatctcatttcgggtggtcatctgagaccccatcctcagcccatgggcattcagttccaaccttctcccgctaggatccctctacatagactcaagacagggagtccttgcaggctctctctgccacaggacctacgtctgttcagaagaaactctcctgcctccctaccccagaaaaaactctgagggtgcaggctggtcccagtgaggtggcagcagccccaccagagcagctggtgagccctcctgtcaccttccagatttcccaggtgaaactagaccccaggccaccccgctccccagttgtaggggt s panTro4.chr3 13860727 607 - 202329955 aactctgagcttatttttaccttacatccttctctcttcccccagcttgtgcctggccagctgggaacctccagtggacacaaaggagagggctttg--tcttctctctcgttccacttggcctccccGAGCCAGTTACCATAG---------------------------------------------------------AATTGGCTTCAGACTGTCTTGGCAGGCAGATGTTAAATTTTGCCTCTTTTTCATGGAGTGCTTTTACACTCCCTCCACTCAAGTTACCGGCTGAGTGCCGGCTCAG---CCTTTCTCCCAAAATCCTCTTTTATCTGTGGATGTGTCTCAAGTCCAatctcatttcgggtggtcatctgagaccccatcctcagcccctgggcattcagttccaaccttctcccgctaggatccctctacatagactcaagacagggagtccttgcaggctctctctgccacaggacctacgtctgttcagaagaaactctcctgcctccctaccccagaaaaaactctgagggtgcaagctggtcccagtgaggtggcagcagccccaccagagcagctggtgagccctcctgtcaccctccagatttcccaggtgaaactagaccccaggccaccccactccccagttgtaggggt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13841860 603 - 202140232 aactctgagcttatttttaccttacatccttctctctt-ccccagcttgcgcctggccagctgggaacctccagtggacacaatggagacggcttgg--tcttctctctcgttccacttggcctccccGAGCCAGTTACCATAG---------------------------------------------------------AATTGGCTTCAGACTGTCTTGGCGGGCAGATGTTAAATTTTGCCTCTTTTTCATGGAGTGCTTTTACACCCCCTCCACTCAAGTTACCGGCTGAGTGCCAGCTCAG---CCTTTCTCCCAAAGTCCTCTTTAATCTGTGGATGTGTCTCAAGTCCAatctcatttcaggtggtcatctgagaccccatcctcagcccctgggcattcagttcca---ttctcccactaggatccctctacatagactcaagacatagagtccttgcaggctttctctgccatgggacctacgtctgttcagaagaaactctcctgcctccctaacccagaaaaaactctgagggtgcaggctggtcccagtgaggtggcagcagccccaccagagcagctggtgagccctcctgtcaccctccagatttcccagatgaaactagaccccaggccaccccgctccccagttgtaggggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14394376 607 - 123690457 aactctgagcttatttttaccttgcatccttctctcttcccccagcttgggcctggccagctgggaacctccggtggagacaatggagagggcttgg--tcttctctctcgttccACTTGGCTTCCCCGAGCCAGTTACCATAG---------------------------------------------------------AACTGGCTTCAGACTGTCTTGGCGGGCAGATGTTAAATTTTGCCTCTTTTTCATGGAGTGCTTTTACACCCCCTCCACCCAAGTTACCAGCTGAGTGCCGGCTCAG---CCTTTCTCCCAAAGTCCTCTTTAATCTGTGGATGTGTCTCAAGTCCAatctcatttcaggtggtcatctgagaccccctcctcagcccctgggcataaagttccaaccttctcccactaggatccctctacgtagactcaagacatggagtccttgcaggctgtctctgccatggaacctacgtctgttcagaagaaactctcctgcctccctaacccagaaaaatctctgagggtgcaggctggtcccaatgaggtggcagcagccccaccagagcagctggtgagccctcctgtcaccctccagatttcccaggtgaaactagatcccagggcaccccgctccccagttgtaggagt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103690987 598 + 192599291 cactctgagcttatttttaccttacattcttctctcttcccccagcgtaggcctggccagctgggaacctccagtggagacaatgcagagggcttgg--tcttctctctctttccacttgacctccccGAGCCAGTTACCATAG---------------------------------------------------------AGTTGGCTTCAGACTGTCTTGGCCGGCAGATGTTAAATTTTGCCTC------------TGTTTTTACACCCCCTCCACTCAAGTTACCAGCTGAGTGCCGGCTCCAGTCTCTTTCTCCCAAAGTGCTCTCTAATCTATGGATGTGCCTCAAGTCCAatttcatttcgggtggtcatctgagaccccatcctcagcccctaggcattcagttccaaccttctcccactaggatccctctacatagactcaagacatggagtccttgcaggctttctctgccatgggacctacctctgttaagaagaaactctcctgcctctctaacccagaaaaaactctaggggtgcaggctggtcccagtgaggtggcagcagccccaccagagcagctggtgagcactcctgtcacccttcagatttaccaggggaaactagaccctaggccaccccgccccccagttgtagaggt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103335661 598 - 192460366 cactctgagcttatttttaccttacattcttctctcttcccccagcgtaggcctggccagctgggaacctccagtggagacaatgcagagggcttgg--tcttctctctctttccacttgacctccccGAGCCAGTTACCATAG---------------------------------------------------------AGTTGGCTTCAGACTGTCTTGGCCGGCAGATGTTAAATTTTGCCTC------------TGTTTTTACACCCCCTCCACTCAAGTTACCAGCTGAGTGCCGGCTCCAGTCTCTTTCTCCCAAAGTGCTCTCTAATCTATGGATGTGCCTCAAGTCCAatttcatttcgggtggtcatctgagaccccatcctcagcccctaggcattcagttccaaccttctcccactaggatccctctacatagactcaagacatggagtccttgcaggctttctctgccatgggacctacctctgttaagaagaaactctcctgcctctctaacccagaaaaaactctaggggtgcaggctggtcccggtgaggtggcagcagccccaccagagcagctggtgagcactcctgtcacccttcagatttaccaggggaaactagaccctaggccaccccgccccccagttgtagaggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101128932 598 + 187378091 CACTCTGAGCTTATTTTTACCTTACATTCTTCTCTCTTCCCCCAGCGTAGGCCTGGCCAGCTGGGAACCTCCAGTGGAGACAATGCAGAGGGCttgg--tcttctctctctttccacttGACCTCCCCGAGCCAGTTACCATAG---------------------------------------------------------AGTTGGCTTCAGACTGTCTTGGCCGGCAGATGTTAAATTTTGCCTC------------TGTTTTTACACCCCCTCCACTCAAGTTACCAGCTGAGTGCCGGCTCCAGTCTctttctcccaaagtgctctctAATCTATGGATGTGCCTCAAGTCCAATTTCATTTCGGGTGGTCATCTGAGACCCCATCCTCAGCCCCTAGGCATTCAGTTCCAACCTTCTCCCACTAGGATCCCTCTACATAGACTCGAGACATGGAGTCCTTGCAGGCTTTCTCTGCCATGGGACCTACCTCTGTTAAGAAGAAACTCTCCTGCCTCTCTAACCCAGAAAAAACTCTGGGGGTGCAGGCTGGTCCCGGTGAGGTGGCAGCTGCCCCACCAGAGCAGCTGGTGAGCACTCCTGTCACCCTTCAGATTTCCCAGGGGAAACTAGACCCTAGGCCACCCCGCCCCCCAGTTGTAGAGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4991383 596 + 91754291 cactctgagcttatttttaccttacattcttctctcttcccccaccgtaggcctggccagctgggaacctccagtggagacaatggagagggcttgg--tcttctc-ctctttccacttgacctccCGGAGCCAGTTACCACAC---------------------------------------------------------AGTTGGCTTCAGACTGTCTTGGCCGGCAGATGTTAAATTTTGCCTC------------TGTTTTTACACCCCCTCCACTCAAGTTACCAGCTGAGTGCCGGCTCCAGTCTCTTTCTCCCAAAGTCCTCTCTAATCTATGGATGTGCCTCAAGTCCAatttcatttcgggtggtcatctgggaccccatcctcagcccctaggcattcagttccaaccttctcccactaggatccctctacatagactcaagacatggaatccttgcaggctttctctgccatgggacctacctctgttaagaagaaactctcctgcttctctaacccagaaaaaactctgggggtgcaggctggtcccggtgaggtggcagcagccccaccagagcagctggtgagcattcctgtcacccttcagatttcccaggggaaactagaccctaggcca-cccgccccccagttgtaggggt i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92429696 591 - 98464013 AACTCTGAGCTTATTTTTCCCTTAAATCCTTCACTCTT-CCCCTGCTTGGGCCTGGCCAGC-------------TGGAGACGGTGGAGAGGGCTTGG--TCTTCTTTCTCTTTCTATTTGGCCTCCGCAAGCCAGTT-CCATAG---------------------------------------------------------AGTTGGCTTCAGACTGTCTTGGCAGGCAGATGTTCAATTCTGCCTCCTTCTCTTGGAGTGCTCTTACACCCACTCCACTCAAGTTGCCGGCTGAGTGCTGGCTCAG-CCTCTTTCTCCCAAAATCCTCTGAAATCTGTGAGTGTGTCTCAAACCCAACCTCACTTCAGGTGGTCATGCGAGaccccatcctcagcccctgggtattcagctccagctgcctcccattagaatccctctgcatggactcaagacatggagtccttgtaggctccgtctgccgtgggacctacttctgttcagaagaaacgctcctgcctccctaacccagaaaaaaa-ctgggggtgcaggctggttccagtgaagtggcagcagccccaccagagcagctggggagctgtcctgtcatcctccagatttcccaggtgaaactggaccccaggccaccccagccccc--ttgcaggggt i calJac3.chr15 I 326 C 0 s canFam3.chr34 24823049 563 - 42124431 aactctagacttatttttaccttcagtcct---ctcctcccccagccggggcctgcccagctgggagcctgaagtggggacaatgtagaggagttggcttcttctctctttttccacccggcctcccc-agccagttgccatggctacggctgctggcggtctgtgggagcagtcggggggaaggggtagcaaCAGCTGTACATTGACTTCAGGCTTTCTTGCCAGACAGATGTTAAGTTCTGTCTCTTTCTCACCGAGTGCTTTAATGCCCTCTCCA---AAGCTTC----------CCCACTCGG-CCTCTTTCTCCTGAAGCTCTCTCTAACCTGGGGATGCGTCTCAAGTTCAGTCTCATTTCAGGTGGTCATCTGAGATCC---TCTCTGCCTCTGGGCATACAGCTCCAGCCTT-------------------------------------------TGGCTAGTTCTC------------------------------ATACCCCATGGCTTCTATATcccccaaaa--ctctgggta-gtaggctggtccccacatggtaacagcagccccactaaagcagctagtggg-------agcaccttccagatctcccaggtaggaccaaagcccaggcaagcatg--cctcagctgcagcggt i canFam3.chr34 C 0 C 0 a score=28616.000000 s hg38.chr3_KI270781v1_alt 110140 11 + 113034 ctcatgttagg s panTro4.chr3 13861334 11 - 202329955 ctcatgttagg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842463 11 - 202140232 ctcatgttagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14394983 11 - 123690457 ctcatgttagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691585 11 + 192599291 ctcctgttagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336259 11 - 192460366 ctcatgttagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129530 11 + 187378091 CTCATGTtagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4991979 11 + 91754291 ctcatgttagg i chlSab2.chr15 C 0 C 0 s canFam3.chr34 24823612 11 - 42124431 cacacactgtg i canFam3.chr34 C 0 C 0 e calJac3.chr15 92430287 0 - 98464013 C a score=378317.000000 s hg38.chr3_KI270781v1_alt 110151 167 + 113034 ctctGt------tttttctttttcttttttgagacggagtctcactctgtcatccgggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtgcctgccaccatgccc s panTro4.chr3 13861345 167 - 202329955 ctctGt------tttttctttttcttttttgagacggagtctcactctgtcatccgggctggagtgcagtggcgcaatctcagctcactacaacctccgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcgcctgccaccatgccc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842474 173 - 202140232 ctcttttttttctttttctttttcttttttaagacggagtctcactctgtcatccgggctggagtgcaatggcacaatctcagctcactgcaacctccgcctcctgggttcaattgattctcctgcctcagcctcccgagtagctgggattacaggtgtatgccaccatgccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14394994 168 - 123690457 ctctttt-----tttttttttttcttttttgagaaggagtctcactctgtcatctgggctggagtgcaatggcacaatttcagctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacagttgtgaaccatcatgcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691596 171 + 192599291 ctctttttat--tttttctttttcttttttgagatggattctcgctctgtcatccaggctgtggtgcaacggcgcaatctcagtttactgcaacctccgcctcctgggttcaagcaattctcctgcttcggtctcctgagtagctgggattacagttgtgtgccaccatgccc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336270 171 - 192460366 ctctttttat--tttttctttttcttttttgagatggattctcgctctgtcatccaggctgcggtgcaatggcgcaatctcagttcactgcaacctccacctcctgggttcaagcaattctcctgcttcggtctcctgagtagctgggattacagttgtgtgccaccatgccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129541 171 + 187378091 ctctttttat--tttttctttttcttttttgagatggattctcgctctgtcatccaggctgtggtgcaacggcgcaatctcagttcactgcaacctccgcctcctgggttcaagcaattctcctgcctcggtctcctgagtagttgggattacagttgtgtgccaccatgccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4991990 171 + 91754291 ctttttttat--tttttctttttcttttttgagatggattctcgctctgtcatccaggctgcagtgcaacggcacaatcgcagttcactgcaacctccgcctcctgggttcaagcaattctcctgcctcggtctcctgagtagctgggattacagttgtgtgccaccatgccc i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C a score=8911.000000 s hg38.chr3_KI270781v1_alt 110318 5 + 113034 agctg s panTro4.chr3 13861512 5 - 202329955 agctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842647 5 - 202140232 ggctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14395162 5 - 123690457 ggctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691767 5 + 192599291 agctg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336441 5 - 192460366 agctg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129712 5 + 187378091 agctg i papAnu2.chr2 C 0 C 0 e chlSab2.chr15 4992161 0 + 91754291 C e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C a score=10047.000000 s hg38.chr3_KI270781v1_alt 110323 20 + 113034 atttttttatttttagtaga s panTro4.chr3 13861517 20 - 202329955 atttttttatttttagtaga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842652 20 - 202140232 acttttttatttttagtaga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14395167 20 - 123690457 atttttgtatttttagtaga i nomLeu3.chr11 C 0 C 0 e chlSab2.chr15 4992161 0 + 91754291 C e papAnu2.chr2 101129717 0 + 187378091 C e macFas5.chr2 103336446 0 - 192460366 C e rheMac3.chr2 103691772 0 + 192599291 C e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C a score=28632.000000 s hg38.chr3_KI270781v1_alt 110343 108 + 113034 gatggggtttcaccatgttggccaggctggtctagaattcctgacctcatgatccgcctggcttggcctcccaaagtgctgggattacaggcgtgtgccaccgcacct s panTro4.chr3 13861537 108 - 202329955 gatggggtttcaccatgttggccaggctggtctagatttcctgacctcatgatccgcctggcttggcctcccgaagtgctgggattacaggggtgcgccaccgcacct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842672 108 - 202140232 gacggggtttcaccatgttggccaggctggtctagaattcctgacctcatgatccgccaggcttggcctcccaaagtgctgggattacaggcgtgcaccaccacacct i ponAbe2.chr3 C 0 C 0 e chlSab2.chr15 4992161 0 + 91754291 C e papAnu2.chr2 101129717 0 + 187378091 C e macFas5.chr2 103336446 0 - 192460366 C e rheMac3.chr2 103691772 0 + 192599291 C e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C e nomLeu3.chr11 14395187 0 - 123690457 C a score=2472.000000 s hg38.chr3_KI270781v1_alt 110451 5 + 113034 agcta s panTro4.chr3 13861645 5 - 202329955 agcta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842780 5 - 202140232 agcta i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 4992161 5 + 91754291 ggcta i chlSab2.chr15 C 0 C 0 e papAnu2.chr2 101129717 0 + 187378091 C e macFas5.chr2 103336446 0 - 192460366 C e rheMac3.chr2 103691772 0 + 192599291 C e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C e nomLeu3.chr11 14395187 0 - 123690457 C a score=35622.000000 s hg38.chr3_KI270781v1_alt 110456 20 + 113034 atttttgtatttttagtacc s panTro4.chr3 13861650 20 - 202329955 atttttgtatttttagtacc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842785 20 - 202140232 atttttgtatttttagtacc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 103691772 20 + 192599291 atttttgtatttttagtaca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336446 20 - 192460366 atttttgtatttttagtaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129717 20 + 187378091 atttttgtatttttagtaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4992166 20 + 91754291 atttttgtatttttagtgca i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C e nomLeu3.chr11 14395187 0 - 123690457 C a score=255485.000000 s hg38.chr3_KI270781v1_alt 110476 111 + 113034 gatggggtttcaccatgttggccaggctggtctcgaactcctgacctcatgatctgcccggcttggcctcccaaagtgctaggattacaggtgtgagccaccacacctggc s panTro4.chr3 13861670 111 - 202329955 gatggggtatcaccatgttggccaggctggtctcgaactcctgacctcttgatctgcccggcttggcctcccaaagtgctgggattacaggtgtgagccaccacacctggc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842805 111 - 202140232 aatggggtatcaccatgttggccaggctggtctcgcactcccgacttcatgatctgcctggcttggcctcccaaagtgctgagattacaggcatgagccactgcacctggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14395187 111 - 123690457 gacagggtttcaccatgttggccaggctggtctcgaactcctgacctcatgatctgtccggatcagcctcccgaagtgttgggattacaggcgtgagccaccgcgcccagc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691792 111 + 192599291 gacagggtatcaccatgttggctaggctagtctcaaactcctgacctcatgatccgcccggcttggcctcccgaagtgctgggattacaggcatgagccaccgcgcccggc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336466 111 - 192460366 gacggggtatcaccatgttggctaggctagtctcaaactcctgacctcatgatccgcccggcttggactcccgaagtgctgggattacaggcatgagccaccgcgcccggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129737 111 + 187378091 gatggggtatcaccatgttggctaggctagtctcaaactcctgacctcatgatccgcccggcttggcctcccgaagtgctgggattacaggcatgagccaccgcgcccggc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4992186 111 + 91754291 gacggggtatcaccatgttggctaggctggtctcaaactcctggcctcatgatgcgcccggcttggcctcccaaagtgctgggattacaggcatgagccaccacgcccggc i chlSab2.chr15 C 0 C 0 e canFam3.chr34 24823623 0 - 42124431 C e calJac3.chr15 92430287 0 - 98464013 C a score=34947.000000 s hg38.chr3_KI270781v1_alt 110587 11 + 113034 cTCATGTTAGA s panTro4.chr3 13861781 11 - 202329955 cTCATGTTAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842916 11 - 202140232 cTCATGTTAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14395298 11 - 123690457 ctcatgttaga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691903 11 + 192599291 cttatgttaga i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336577 11 - 192460366 cttatgttaga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129848 11 + 187378091 ctcatgttAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4992297 11 + 91754291 ctcatgttaga i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92430287 11 - 98464013 cttatgttaga i calJac3.chr15 C 0 C 0 e canFam3.chr34 24823623 0 - 42124431 C a score=5533867.000000 s hg38.chr3_KI270781v1_alt 110598 1669 + 113034 CTCTTAAAGAAGCTGCCCCACAGACACTCAcccttaccaagtgtgaggtaagggagcaggagctcacctgtccccaggatgggactcacag-cacagctttcttca---aggacgtccgccatacaacatcctcccatcacctgtctgtctacattttcagtgtctcaaagtgggaaaggggtttc-aaagtcttggatcagattttttggcatttccatagaaaatct-tccataaggtgactcgggctctcactttggatcttcacatctatggtgcatattagtgtctagtggaaa------tttTAAGGCCCTATTATTCTAtttatatgcattgacctttt-tatcttca-taagctcagacaacattttccatttttaagatgagaataattcatctctgagggcccagagaggtaaggccaaggtcacccaactggccagtgatgaagctgggattccaaccaggtctatctggcATCCTCTGGGAGGTGCATGCT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGTGTGTCTCTCGCTTGAGGGCCCAGACCCTGGGTGACTATGAGAGGCTCCGTGCTACT-TAGAGCTGATCTATGTCAGCTCCTATGGCTTGTCATTGCCCACTTCCCCACAGGACACGTTCTGGGACCTAGTTTCAGAGAGCGGGCTGGGAAGAC-------------GAGATCGATAATTCTGCCCTTCTGGCAAGAGCCCCATCTGGATGTGACTTTCAGCTCAAAAGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCGCTGGGATCCCAGCCATGCCCTCGCCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTATGGTAGCAAGGCATGCCAGGGCTTCCACAGGTGGTCCAGTGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGGCTGCGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAATGTCCACCA-AACATCCTGATGCGCAGC-AAACACTGAATGAAATGGAAAAAGATTTACAAGATTTACAATACATTATTAAGATTTACAATACATTATTAAGATTTACAATA-------CATTATTAAGTGAAGGGCCTGGACAGCAGGAGCCCATCTTCATCAAAGCAGTGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCGCAGCCTGGGTGCTTGGCTCCATCGATTCCTGTGGGTTCTTCGAAGGGTCAAAGagggtcccaaggctgacccacaggtatgggggcaggacaaagtccagccccttccccttcttgcagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacatgctctaaacacaaagggagtcttcataccccacaccattttcctcagacaactgggccactcactgggcacccatctgctacatgctcccctcagtgatgccaggaggccctactcccacccCACCCCCAG s panTro4.chr3 13861792 1629 - 202329955 CTCTTAAAGAAGCTGCCCCACAGACACTCACCCTTACCGAGTGTGAGGTAAGGGAGCAGGAGCTCACCTGTCCCCAggatgggactcacag-cacagccttcttca---aggacatccgccatacaacatcctcccatcacctgtctgtctacattttcagtgtctcaaagtgggaaaggggtttc-aaagtcttggatcagattttctggcatttccatagaaaatct-tccataaggtgactcgggctctcactttggatcttcacatctatggtgcatattagtgtctagtggaaa------tttTAAGGCCCTATTATTCTGtttatatgcattgacctttt-tatcttca-taagctcagacaacattttccatttttaagatgagaataattcatctctgagggcccagagaggtaaggccaaggtcacccaactggccagtgacgaagctgggattccaaccaggtctatctggcATCCTCTGGGAGGTGCATGCT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGTGTGTCTCTCACTTGAGGGCCCAGACCCTGCGTGACTATGAGAGGCTCCGTGCTACT-TAGAGCTGATCTATGTCAGCTCCTATGGCTTGTCATTGCCCACTTCCCCACAGGACACGTTCTGGGACCTAGTTTCAGAGAGCGGGCTGGGAAGAC-------------GAGATCGATAATTCTGCCCTTCTGGCAAGAGCCCCATCTGGATGTGACTTTCAGCTCAAAAGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCGCTGGGATCCCAGCCATGCCCTCGCCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTATGGTAGCAAGGCATGCCAGGGCTTCCACAGGTGGTCCAGTGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTGACTCAGCTGGTCCCTGCAAGAGGGGGAGTATGTGGCACTGGCCAGCTCCCAAGATGGGCTGGGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAATGTCCACCA-AACATCCTGATGCGCAGC-AAACACTGAATGAAGTGGAAAAAGATTTAC----------------------------------------AAGATTTACAATA-------CATTATTAAGTGAAGGGCCTGGACAGCAGGAGCCCATCTTCATCAAAGCAGTGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCGCAGCCTGGGTGCTTGGCTCCATCGATTCCTGTGGGTTCTTCGAAGGGTCAAAGagggtcccaaggctgacccacaggtatgggggcaggacaaagtccagccccttccccttcttgcagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacatgctctaaacacaaagggagtctccataccccacactattttcctcagacaactgggccactcactgggcacccatctgctacatgctcccctcagtgatgccaggaggccctactcccacccCACCCCCAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13842927 1621 - 202140232 CTCTTAAAGAAGCTGCCCCACAGACACTCACCCTTACCAAGTGTGAGGTAAGGGAGCAGGAGCTCACCTGTGCCCAggatgggactcacag-cacagctttcttca---aagacatccgccatacaacatcctcccatcacctgtctgtctacattttcagtgtctcaaagcaggaaaggggtttc-aaagtcttggatcagattttttggcatttccacagaaaatct-tccataaggtgactcgagctctcactttggattttcacatctatgatgcatattagtgtctagtggaaatttcagttttaaggccc---tattCTAtttatatacattgacctttt-tatcttca-taagctcagacaatattttccatttttaagatgagaataattcatctctga-ggcccggagaggtaaggccaaggccacccaactggccagtgacgaagctgggattccaaccaggtctatctggcATCCTCTGGGAGGTGCACGCT---------------CAAGCCC-----AAGAATCTGAGGATACATAGAGAAGTGTGTCTCTCACTTGAGGGCCCAGACCCTGGGTGACTACGAGAGGCTCCGTGCTACT-TAGAGCTGATCTATGTCAGCTCCTATGGCTTGTCATTGCCCACTTCCCCACAGGACACGTTCTGGGACCCAGTTTCAGAGAGGGGGCTGGGAAGAC-------------GAGATCGATAATTCTGCCCTTCTGGCAAGAGCTCCATCTGGATGTGACTTTCAGCTCAAAAGAGTGCGCCAGGACGACTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGTTCAGTTCAGCCAAGACTGTGACTGCAGAAGAATGGGGATCCTGCGCTGGGATCCCAGCCATGTCCTCGCCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTATGGTAGCAAGGCATGCCAGGGCTT-CACAGGTGGCCCAGCGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGGCTGGGTTTGGTCTCCAGGGAGGTCCCGTCTGGTGGGCATTTCCAACATAAGCGGTTGGGCAAGAAGCCAGGGTTCATCCACAATGGAATGTCCACCA-AACATCCTGATGCACAGC-AAACACTGAATGAAATAGAAA-------------------------------------------------AAGATTTACAATA-------CATTATTAAGTGAAGGGCCTGGACAGCAGGAGCCCATCTTCGTGAAAGCAGTGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCGCAGGCTGGGTGCTTGGCTCCATCGATTCCTGTGGGTTCTTCGAAGGGTCAAAGagggtcccaaggctgacccacaggtgtgggggcaggacaaagtccagccccttacccttcttggagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacacgttctaaacacaaagggagtcttcataccccacaccattttcctcagacaactgggccactcactgggcacccatctgctaaatgctcccctcagtgatgccaggaggccCCACTCCCACCCCACCCCCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14395309 1621 - 123690457 ctcttaaagaagctgccccacagacactcacccttatcaagtgtgaggtaagggagcaggagctcacttgtccccaggatgggactcgcag-cacagctttcttca---aggacatccgccatatgacatcctcccatcacctctctgtctacattttcagagtctcaaagtgggaaaggggtttc-aaagtcttgaatcagatcttttggcatttccatagaaaatct-tccataaggtgactcgggctctcactttgggtcttcacatctatggtgcatattagtgtctagtggaaatttcagttttaaggccc---tattCTAtttatatgcattgacctttt-tatcttca-taagctcagacaacattttccatttttaagatgagaataattcatctctgagggcccagagaggtaaggccaaggttacccaactggccagtgacgaagctgggattccaaccaggtctatctggcATCCTCTGGGAGATGCACACT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAA--GTGTCTCTCACTTGAGGGCCCAGACCCTGGGTGACTAAGAGAGGCTCTGTGCTACT-TAGAGCTGATCTATGTCAGCTCCTACGGCTTGTCATTGCCCACTTCCCCACAGGACACGTTCTGGGACCTAGTTTCAGAGAGGGCGCTGGGAAGAC-------------AAGATTGATAACTCTACCCTTCTGGCAACAGCCCCATCTGGATGTGACTTTCAGCTCAAAAGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTCCAGCCAAGACTGTGACTGCAGAAGAGCGGGGCTCCTGCACTGGGATCCCAGCCACGCCCTCGCCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTATGGCAGCAAGGCATGCCAGGGCTTCCACAGGTGGCCCAGCGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTGACTCAGCTGGTCCCCACAAGAGGGGGAGGATATGGCACTGGCCAGCTCCCAAGATGGGCTGGGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCAGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAATGGCCACCA-AACATTCTGATGCACAGC-AAACACTGAATGAAATAGAAA-------------------------------------------------AAGATTTACAATA-------CATCATTAAGGGAAGGGCCTGGACAGCAGGAGCCCATCTTGGTCAAAGCTGTGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCACAGGCTAGGTGCTTGGCTCCATCGATTCCTGTGGGTTCTTCCAAGGGTCAAAGAAGGTCCCAAGgctgacccacaggtgtgggggcaggacaaagtccagccccttccccttcttggagtcatagctactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacacgctctaaacacaaagggagtcttcaaaccccacaccattttcctcagacaactaggccactcactgggcacccatctgctaaatgctcccctcagtgatgccagaaggccccactcccacccCACCCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103691914 1624 + 192599291 ctcttaaagaagctgccccacagacactcacccttaccaagtgtgagataagggagcaggagctcacctgtccccaggatgggactcgcag-catagctttcttca---aggacatccgccatacaacatcctcccatcacctctctgtctacattttcagagtctcaaagtgggaaaggggtttc-aaactcttagatcagattttttgatttttccatagaaaatcg-tccataaggtaactcaggctctcactttggatcttcacatctatggtgcatattggtgtctagtggaaatttcagttttaaggccc---tattCTAtttatatgcattgacctttt-tatcttca-taaggtcagacaacattttccatttttaacatgagaataattcatctctgagggcccagagaggtaaggccaaggtcacccaactggccagtgacaaagctaggatgccaaccaggtctatctggcATCCTCTGGGAGGTGCACACT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGCGTGTCTCTCATTTGAGGGCCCAGGCCCTGGGTGGCGACATGAGGCTCCGGGCTGCC-TAGAGCTGATCTGTGTCAGCTCCTGTGGCTTGTCGTTGCCCACTTCCCCACAGGACACATTCCGGGACCTAGTTTCGGAGAGGCGGCTGGGAAGAC-------------GAGATCGATAATTCTACCCTTCTGGCAAAAGCCCCATCTGGATGTGACTTTCAGCTCGAAGGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCACTGGGATCCCAGCCATGCCCTTACCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTGTGGTAGCAAGGCATGCCAGTGCTTCCACAGGTGGCCCAGCGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAAATGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGACTGGGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAGCATAAGCAGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAGTGTCCACCA-AACATCCTGATGCACAGCAAAACACTAAATGAAATAGAAA-------------------------------------------------AATATTTCCAATA-------CATTATTAAGTGAAGGGCCTGGAGAGCAGGAGCCCATCTTCATCAAAGCAGCGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCACAGACTGGGTGCTTGGCTCCATCAATTCCTGTGGGTTCTTCAAAGGGTCAAAGagggtcccaaggctgacccacaggtgtagggtcaggacaaagtccaaccccttccccttcttggagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacacactctaaacacaaagggagttttcatagcccacaccattttcctcagacaactgggccactcactgggcacccatctgttaaatgctcccctcagtgatgccaggaggtcccactcccacccCAACCCCAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103336588 1623 - 192460366 ctcttaaagaagctgccccacagacactcacccttaccaagtgtgagataagggagcaggagctcacctgtccccaggatgggactcgcag-cacagctttcttca---aggacatccgccatacaacatcctcccatcacctctctgtctacattttcagagtctcaaagtgggaaaggggtttc-aaactcttagatcagattttttgatttttccatagaaaatcg-tccataaggtaactcaggctctcactttggatcttcacatctatggtgcatattggtgtctagtggaaatttcagttttaaggccc---tattCTAtttatatgcattgacctttt-tatcttca-taaggtcagacaacattttccatttttaacatgagaataattcatctctgagggcccagagaggtaaggccaaggtcacccaactggccagtgacaaagctaggatgccaaccaggtctatctggcATCCTCTGGGAGGTGCACACT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGCGTGTCTCTCATTTGAGGGCCCAGGCCCTGGGTGGCGACGTGAGGCTCCGGGCTGCC-TAGAGCTGATCTGTGTCAGCTCCTGTGGCTTGTCGTTGCCCACTTCCCCACAGGACACATTCCGGGACCTAGTTTCGGAGAGGCGGCTGGGAAGAC-------------GAGATCGATAATTCTACCCTTCTGGCAAAAGCCCCATCTGGATGTGACTTTCAGCTCGAAGGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCACTGGGATCCCAGCCATGCCCTTACCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTGTGGTAGCAAGGCATGCCAGTGCTTCCACAGGTGGCCCAGCGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAAATGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGACTGGGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAGCATAAGCAGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAGTGTCCACCA-AACATCCTGATGCACAGCAAAACACTAAATGAAATAGAAA-------------------------------------------------AATATTTCCAATA-------CATTATTAAGTGAAGGGCCTGGACAGCAGGAGCCCATCTTCATCAAAGCAGTGATCTTG------------CTTCTGAAGAACAGGCCTGAAAGGTAAAGGCACAGACTGGGTGCTTGGCTCCATCAATTCCTGTGGGTT-TTCAAAGGGTCAAAGagggtcccaaggctgacccacaggtgtagggtcaggacaaagtccaatcccttccccttcttggagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacacactctaaacacaaagggagttttcatagcccacaccattttcctcagacaactgggccactcactgggcacccatctgttaaatgctcccctcagtgatgccaggatgtcccactcccacccCAACCCCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101129859 1624 + 187378091 CTCTTAAAGAAGCTGCCCCACAGACACTCACCCTTACCAAGTGTGAGATAAGGGAACAGGAGCTCACCTGTCCCCAGGATGGGACTCGCAG-CACAGCTTTCTTCA---AGGACATCCGCCATACAACATCCTCCCATCACCTCTCTGTCTACATTTTCAGAGTCTCAAAGTGGGAAAGGGGTTTC-AAACTCTTAGATCAGATTTTTTGGCATTTCCATAGAAAATCA-TCCATAAGGTAACTCAGGCTCTCACTTTGGATCTTCACATCTATGGTGCATATTGGTGTCTAGTGGAAATTTCAGTTTTAAGGCCC---TATTCTATTTATATGCATTGACCTTTT-TATCTTCA-TAAGGTCAGacaacattttccatttttaacatgAGAATAATTCATCTCTGAGGGCCCAGAGAGGTAAGGCCAAGGTCACCCAACTGGCCAGTGACAAAGCTAGGATGCCAAACAGGTCTATCTGGCATCCTCTGGGAGGTGCACGCT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGCGTGTCTCTCATTTGAGGGCCCAGGCCCTGGGTGGCGACGTGAGGCTCTGTGCTGCC-TGGAGCAGATCTGTGTCAGCTCCCGTGGCTTGTCGTTGCCCACGTCCCCACAGGACACATTCCAGGACCTAGTTTCGGAGAGGCGGCTGGGAAGAC-------------GAGATCGATAATTCTACCCTTCTGGCAAAAGCCCCATCTGGATGTGACTTTCAGCTCGAAGGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCATCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCACTGGGATCCCAGCCATGCCCTTACCTTGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATAACTTCTGCGAGCTGTGGTAGCAAGGCATGCCAGTGCTTCCACAGGTGGCCCAGCGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAAATGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGGCTGGGTTTGGTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAGCATAAGCAGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAGTGTCCACCA-AACATCCGGATGCACAGCAAAacactaaatgaaatagaaa-------------------------------------------------aatatttccaata-------caTTATTAAGTGAAGGGCCTGGAAAGCAGGAGCCCATTTTCATCAAAGCAGTGAACTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCACAGGCAGGGTGCTTGGCTCCATCAATTCCTGTGGGTTCTTCAAAGGGTCAAAGAGGGTCCCAAGGCTGACCCACAGGTGTGGGGTCAGGACAAAGTCCAACCCCTTCCCCTTCTTGGAGTCATAGACACTCACCTCCATCTCTCCTATATCCTCTCTCAGGGATCTGCGGGCTGGTCTTCTACACACTCTAAACACAAAGGGAGTCTTCATAGCCCACACCATTTTCCTCAGACAACTGGGCCACTCACTGGGCACCCATCTGTTAAATGCTCCCCTCAGTGATGCCAGGAGatcccactcccaccccaaccccag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4992308 1613 + 91754291 ctcttaaagaagctgccccacagacactcatccttaccaagtgtgagataagggagtaggagctcacctgtccccaggatgggactcgcag-cacagctttcttca---aggacat-cgccatacaacatcctcccatcacctctctgtctacattttcagagtctcaaagtgggaaaggggtttc-aaactcttagatcagattttttggcatttccatagaaaatcg-tccataaggtaactcaggctctcactttggatcttcacatctatggtgcatattggtgtctagtggaaatttcagttttaaggccc---tattCTAtttatatgcattgaccttct-tatcttca-taaggtcag---acattttccatttttaacatgacaataattcatctctgagggcccagctc-------tctgggtcacccaactggccagtgacgaagctaggatgccaaccaggtctatctggcATCCTCTGGGAGGTGCACACT---------------CAAGCCC-----AAGAATCTGAGGACACATAGAGAAGCGTGTCTCTCATTTGAGGGCCCAGGCCCTGGGTGGCGACGTGAGGCTCCGTGCTGCC-TAGAGCTGATCTGTGTCAGCTCCTGTGGCTTGTCGTTGCCCACTTCCCCACAGGACACATTCCGGGACCGAGTTTCGGAGAGGCGGCTGGGAAGAC-------------GAGATCGATCATTCTACCCTTCTGGCAAAAGCCCCATCTGGATGTGACTTTCAGCTCGAAGGAGTGCGCCAGGATGGTTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCACTGGGATCCCAGCCATGCCCTTACCTTGGTGTTTTCTCAGTCTGTGTGGTCCTCCTTTTCTCCATAACTTCTGCGAGCTGTGGTAGCAAGGCATGCCAGTGCTTCCACAGGTGGCCCAGTGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAAATGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCCAGCTCCCAAGATGGGCTGGGTTTGGTCTCTAGGGAGGTCCAGTCTGGTGGGCATTTCCAGCATAAGCAGTTGGGCAAGAAGCCAGGGTCCATCCACAATGGAGTGTCCACCA-AACATCCTGATGCACAGCAAAACACTAAATGAAATAGAAA-------------------------------------------------AATCTTTCCAATA-------CATTATTAAGTGAAGGGCCTGGACAGCAGGAGCCCATCTTCATCAAAGCAGTGATCTTG------------CTTCTGGAGAACAGGCCTGAAAGGTAAAGGCACAGGCTGGGTGCTTGGCTCCATCAATGCCTGTGGGTTCTTCAAAGGGTCAAAGagggtcccaaggctgacccacaggtgtggggtcaggacaaagtccgaccccttccccttcttggagtcatagccactcacctccatctctcctatatcctctctcagggacctgcgggctggtcttctacacactctaaacacaaagggagtcttcatagcccacaccattttcctcagacaactgggccactcactgggcacccatctgttaaatgctcccctcagtgatgccaggaggtcccactcccacccCAACCCCAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92430298 1599 - 98464013 ctcttagagaagctgccccacagacactcatccttaccgagggtgagataagggagcaggagctcacctgtccccaagatggaacctgcag-cacagccttcttcaggggggatatcctccatacaaca-caccccgtcacctctctgtctgcattcttagagtctcaacgtggaaaaggggtttc-aaaatctcggattcgattttctggcacttctataggaaatct-TCCATAAAGTGACTGGAGCTCTCCCTTCAGGTCTTCACCCCTGTGGTGCGTATTGCCGTCTGATGGAAATCTTAGTTTTAAGGCCC---CACGCCATTTATATGCATTGACCTTTTCTGCCTTCA-TGAGCTCAGACAACATtttccatttttaagatgagaaaagtccatctctgaggacccagagaggtaaggccaaggcctcccaaccggccagtgatgaagctgggattccaaccaggtctatctggcATCTTCTGGGAGGTGCCTGCC---------------CAAGCCC-----AAGGATCTGAGAACATATAGAGAAGTGTGTTTCTCATCTGGGGCCCCAGGCCTTGGGTGACCATGAGAGGCTCCGTGCTACT-TAGAGCTGATCTATGTCAGCGCCTACAGCTTGTCATTGCCCACCTCCCCACAGGACACATTCCAGGACCTAGTTTCGGAGAGGGGGCTGGGAAGAC-------------AAGATGGATAATTCTATGCTTCTGGCAACAACTCCATCTGGCT----CTTTCAGCTCGAAAGAGTGCGCCAGGACGGCTGACTCACCTGGTCTAGCATCCAAGCCAAACACTGGGAGGAAAGCGCTCCGTTCAGCCAAGACTCTGGCTGCAGAAGAACGGGGATCCTGTGCCAGGATCGCAGCCATGCCCTTGTCTTGGTGTCTTCTCAGTCTGTGTGGGCCTCCTTTTCTCCATCACTTCTGCGAGCTACGGCAGCAAGACACGCCGGGGCTTCCACAGGTGGCCTGGCGCCACACAGGAAGGTGCTGAGAGGCGCAAGACGGAGCAACTGACTCA--TGGTCCCCATGAGAGGGGGAGGCTGTGGCACTGGCCAGCTCCCGAGATGGGCTGGGTTTGGTCTCCAGAGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGGGGGTGGGCAAGAAGCCAGGGTTCATCCACAGCAGAATGGCCACCA-AACATCCTGATGGAGAAC-AAAC----AGTGAGACAGAAA-------------------------------------------------AATATTTACAATATGCAATGCACTGTTAAGTGAAGCACC-GGCCACCAGGAGCCCATCTTTGTC----------------------------------AGAACAGGCCTGAAAGGGAAAGGCACAGCCTGGGTGCTTGGCTCCATCGATTCCTGTGGGTTCTTCGAAGGGTCAAATAAGGTTCCAAGGCTGACCCACAGGTGTGGGGTCAGGACAAAGTCCAGCCCCTCCCCCTTGTTGAAGCCA-AGCCACTCACCTCCATCTCTCCTATATCCTCTCTCAGGGACCTGCAGGCTGGTCTTCTACATGCTCTAAACACAAAGGGAGTCTTCATACCCCACACCATGTCCCCCAGATGGCTGGGCCTCTCGCTGGGCCACCACCTGCTAAAGGCCCCCCTCAGTGATGCCAGAAGGCCCCACTCCCACCCCACCCCCAG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24823623 1593 - 42124431 ctctcagaggagcacctccacccatactcaccctcgctagatctaaggtatgggaccaggaactcaccc-tgtgcgaggtggcacttccagacacagctttcttca---aggagatcc---------------cccatctcctctctctctaccttctcagagtctcaacatgagcaagggatttcaaaagtcttggaacagagttt-ggttatttccttagaaaatctctccatgaggtaacatggcatctcactttggattttcacaaccctaatacatattagtgcctggtaaaaattttcattttaaggccc---tgttacCTTTATATACATTGA-TTCTT-TATGTTCATTAagtacagatagtagtttccactttaaagataaggcaaactcctctct-agggcttaaagatgtaatgccaaggtcacccaaacagccagtgatggaactgggattccaactaggtctgactgGTGTCATCTGGGAGGTGTGTGCTCACTGGCTCTGAGCCCAAGCCCAGATGAAGAATTTGGAGACATAGAGGAAAGTGCTTCCTTCATTT-AGGACCCAGGCCCCAGGTCCTCACAAGAGGCTCCTACCTACTATAGAGCTGATGGAGGTCAGCTCCC------------TGCCCACATTGTCACGGAACACATTCTGGGACCTAGTTTCAGAAAGAGGGCTGGGAGGGCTTGGGTTATGGGAGAGACCAATAATTATACTGATCTGGCAACTACCCCATCTCAATGTGACTTTGA-CTCGAAGTAGGGTGCCAGGAGAGCTGACTCACCTAGTCTAGCATCCAAGCCAAACACTGTGAGGAAAGGGCTCAACTCAGCCAAGACTGTAACTGCGGGAGGATGGGGCT-CTGTGCTGGGATCCCAGCCATGCCTCTGCCTCGGTGTTTTCTCAGTGTGCTTGGGCCTCCTTTTCTCGATAA-TTCTGTGAGATTCAG-AGCCAGGCATGCTGGGGCTTCAACAGGTGGTCCGGAACCACACAGGGAGGTGTTGAGAGGTGAGCAATGGAGGAACTGACTTAGCTGGTCCTTGTAGGAGCAGGAGGATAATGCACTGACCACCTCCCAAGATGGTCTTCATTTGGTCTCCAAGGAGGTTCAGTCTGTTGAGAGTTTCCAACACAGG-GGCTAGTTCATAAGCCATGGTCCATCCGCAATGAAG----CACCACAACATA-------------GAACACTGGATAATATGGAAA-------------------------------------------------GATATTTACAATA-------TATTA-TAAGTGAACACTGTGTAGAGCAAGATTCTATCTTTATAAAAGCAGCCTTCTTGCTTGAACAAGTACTTCTGGAAGACAAGCTGGAAACGT------GCAGTCTAGGTGATTGGCTCCATTGATTGTTCTCCCTGCTTT----------------TCCTCAGgctgaccca-aagtgtaaggtcaggacacggtccagccccttccacttc-tagagtcagagccatgcacctccatctcccttacatcctctcccagggatctgttagc-agtcttctacaccttccatatacaaaggggattgtcataccccacaccat-ttctccagacaactgggccactcactgggcacccattggttgaatgctccctttggtgattccaggaagcccca-tccaatcccaccctCAT i canFam3.chr34 C 0 I 519 a score=327217.000000 s hg38.chr3_KI270781v1_alt 112267 94 + 113034 CTTCTGGGTCTGTTTATTTTGACTCTTAACCTCTCCATC----AGAAGGAAGGACTGACCTCTCTCTGTTATGCATATACACTTGCATATGGATTCTT s panTro4.chr3 13863421 94 - 202329955 CTTCTGGGTCTGTTTATTTTGACTCTTATCCTCTCCATC----AGAAGGAAGGACTGACCTCTCTCTGTTATGCATATACACTTGCATATGGATTCTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13844548 94 - 202140232 CTTCTGGGTCTGTTTATTTTGACTCTTATCCTCTCCATC----AGAAGGAAGGACTGACCTCTCTCTGTCATGCATATACACTTGCATATGGATTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14396930 94 - 123690457 CTTCTGGGTCTGTTTATTTCGACTCTTATCCTCTCCATC----AGAAGGAAGGACTGACCTCTGTCTTTTGTGCATATACACTCACATATGGATTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103693538 98 + 192599291 CTTCTGGGTTTGTTTATTTTGACTCTTATCCTCTCCATCAGAAAGAAGGAAGGACTGACCTCTCACTGTTATGCATATACACTTGCCTATGGATTCTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103338211 98 - 192460366 CTTCTGGGTTTGTTTATTTTGACTCTTATCCTCTCCATCAGAAAGAAGGAAGGACTGACCTCTCACTGTTATGCATATACACTTGCCTATGGATTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101131483 98 + 187378091 cttctgggtttgtttattttgacTCTTATCCTCTCcatcaaaaagaaggaaggactGACCTCTCACTGTTATGCATATACACTTGCCTATGGATTCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4993921 98 + 91754291 CTTCTGGGTTTGTTTATTTTGACTCTTATCCTCTCCATCAGAAAGAAGGAAGGACTGACCTCTCACTGTTATGCATATACACTTGCCTATGGATTCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92431897 94 - 98464013 CTTCTGGGTTTGTTTATTTTGACCCTCAGCCTCTCCATC----AGAAGGAGGGACTGGATTCTCTCTGTTATGCATATACACTTGCATATGTATTCTT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24825735 93 - 42124431 CTGTTGGGTTTGTTTATTTTGACTCTTATTCTCTCCATC----AGAAGGAAGGACTGACTTCCC-CAGATATGTATTTATGCCTGAATATGTATGCTT i canFam3.chr34 I 519 C 0 a score=898166.000000 s hg38.chr3_KI270781v1_alt 112361 307 + 113034 AAAGAAAGTTCTGGAAAGAggcctggcatggtggctcgtgcctgtaatcccagaactttgggaagccaaggcgggtggatcacctgaggtcagcagttcgagaccagcctgtccaacattgtgaaaccccatctctactaaaaatacaaaattagcccgtgtggtggcacgtgcctgtaatcccagctactcgggagtctgagacaggagaatcgcttgaactggggaggtggaggcttcagtgagccaggatcttgccactgcactccagcgtgggtaagacagagcaagactctatctcgg------aaaa s panTro4.chr3 13863515 308 - 202329955 AAAGAAAGTTCTGGAAAGAggcctggcatggtggctcatgcctgtaatcccagaactttgggaggccaaggcgggtggatcacctgaggtcagcagttcgagaccagcctggccaacattgtgaaaccccatctctactaaaaatacaaaattagcccgtgtggtggcatgtgcctgtaatcccagctactcgggagtctgagacaggagaatcgcttgaactggggaggtggaggcttcagtgagccaggatcttgccactgcactccagcgtgggtaagacagagcaagactctatctcgg-----aaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13844642 307 - 202140232 AAAGAAAGTTCTGGAAAGAggcctggcatggtggctcatgcctgtaatcccagaactttgggaggccaaggcaggtggatcacctgaggtcagcagttcgagaccagcctggccaacattgtgaaaccccatctctactaaaaatacaaaattagcccgtgtggtggcatgtgcctgtaatcccaactactcgggagtctgagacgggagaatcgcttgaactggggaggtggaggcttcagtgagccaggatcttgccactgcactccagcatgggtaagacagagcaagactctgtctcgg------aaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397024 305 - 123690457 AAAGAAAGTTCTGG-AAGAggcctggcatggtggctcacgcctgtaatcccagaactttgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacattgtgaaaccccaactctactaaaaatacaaaattagcccgtgtggtggcgtgtgcctgtaatcccagctactcgggagtctgagacaggagaatcacttgaactggtcaggtggaggcttcagtgagccaggatcttgccactgcactccagcgtgggtaagacagagcgagactctgtctcag-------aaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103693636 312 + 192599291 AAAGAAAGTTCTAGAAAGAggcctggcatggtggttcatgcctgtaatcccagaattttgagaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacattgtgaaaccccatctctactaaaactacaaaattagccggtgtggtcccatgcacctgtaatcccagctactcaggagactgagacaggagaatcgctgaaacccaggaggtggaggcttcagtgagccgagatctcgccactgcactccagtgtgggtgagacagagcgagactctgtcccag-aaaaaaaaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103338309 312 - 192460366 AAAGAAAGTTCTAGAAAGAggcctggcatggtggttcatgcctgtaatcccagaactttgagaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacattgtgaaaccccatctctactaaaactacaaaattagccggtgtggtcccatgcacctgtaatcccagctactcaggagactgagacaggaaaatcgctgaaacccaggaggtggaggcttcagtgagccgagatctcgccactgcactccagtgtgggtgagacagagcgagactctgtcccag-aaaaaaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101131581 313 + 187378091 AAAGAAAGTTCTAGAaagaggcctggcatggtggttcatgcctgtaatcccagaactttgagaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacattgtgaaaccccatctctactaaaactacaaaattagccggtgtggtcccatgcacctgtaatcccagctactcaggagactgagacaggagaatcgctgaaacccaggaggtggaggcttcagtgagccgagatctcgccactgcactccagtgtgggtgagacagagcgagactctgtcccagaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4994019 312 + 91754291 AAAGAAAGTTCTAGAAAGAGGACTggcatggtggttcatgcctataatcccagaagtttgagaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagtctggccaacattgtgaaaccccatctctactaaaactacaaaattagccggtgtggtcccatgcacctgtaatcccagctactcaggagactgagacaggagaatcgctgaaacccaggaggtggaggcttcagtgagccgagatctcgccactgcactccagtgtgggtgagacagagcgagactctgtcccag-aaaaaaaaa i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92431991 307 - 98464013 AGAGAAAGTTCTAGAAAGAGACCTAgcacagtggctcacacctgtaatcccagaactttgggaggccgaggtgggcggatcacctgaggtcagaagttcgagaccagtctggccaacatgatgaaaccccacctctactaaaaagacaaaatttgccagtgtggtggcgtgcacctgtaatcccagctactcgggaggctgagacaggagaatcgcttgaacccaggaggtggaggccttagtgagccgagatcatgccactgcactccagcccaggcaagaaagagcaagattccatcttgg------ggga i calJac3.chr15 C 0 C 0 e canFam3.chr34 24825828 0 - 42124431 C a score=195310.000000 s hg38.chr3_KI270781v1_alt 112668 52 + 113034 aaaaaaGTTctggaaagaaacacagcaaaatgttaagagtggttgtgacaag s panTro4.chr3 13863823 52 - 202329955 aaaaaaGTCctggaaagaaacacagcaaaatgttaagagtggttgtgacaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13844949 52 - 202140232 aaaaaaGTTctggaaagaaacacagcaaaatgttaagagtggttgtgacaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397329 52 - 123690457 aaaaaaGTTctggaaagaaacatagcaaaatgttaagagtggttgtgacaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103693948 52 + 192599291 aaaaaaGTTCTGGAAAGAAACACAGCAAAATGTTAAGAGTGGTTGTGACAAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 103338621 52 - 192460366 aaaaaagttctggaaagaaacacagcaaaatgttaagagtggttgtGACAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101131894 52 + 187378091 aaaaaagttctggaaagaAACACAGCAAAATGTTAAGAGTGGTTGTGACAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4994331 52 + 91754291 aaaaaaGTTCTGGAAAGAAACACAGCAAAATGTTAAGAGTGGTAGTGACAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92432298 52 - 98464013 aaaaaaGTTCTGGAAAGAAACATGGCAAAATGTTAAGAATGTTTGTGACAAG i calJac3.chr15 C 0 C 0 s canFam3.chr34 24825828 52 - 42124431 AGAAGAATTTTGGAAGGAAACACAACAAAATGCCTAAAGTAGTTATGGCAAG i canFam3.chr34 C 0 C 0 a score=2800.000000 s hg38.chr3_KI270781v1_alt 112720 1 + 113034 g s panTro4.chr3 13863875 1 - 202329955 g i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13845001 1 - 202140232 g i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397381 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 103338673 1 - 192460366 G i macFas5.chr2 C 0 I 47 s papAnu2.chr2 101131946 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s calJac3.chr15 92432350 1 - 98464013 G i calJac3.chr15 C 0 C 0 s canFam3.chr34 24825880 1 - 42124431 G i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4994383 0 + 91754291 C e rheMac3.chr2 103694000 0 + 192599291 C a score=17472.000000 s hg38.chr3_KI270781v1_alt 112721 28 + 113034 gattgatattaaaatactcttgttttct s panTro4.chr3 13863876 28 - 202329955 gcttgatattaaattactgttattttct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13845002 28 - 202140232 gcttgctattaaaatactcttattttct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397382 28 - 123690457 gcttgatattaaaatactcttattttct i nomLeu3.chr11 C 0 C 0 s calJac3.chr15 92432351 27 - 98464013 GCTTG-TATTAAAATACTCTTAATTTCT i calJac3.chr15 C 0 I 317 s canFam3.chr34 24825881 15 - 42124431 GCTTGGAAT--------TCTTAT----- i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4994383 0 + 91754291 C e papAnu2.chr2 101131947 0 + 187378091 C e macFas5.chr2 103338674 47 - 192460366 I e rheMac3.chr2 103694000 0 + 192599291 C a score=12124.000000 s hg38.chr3_KI270781v1_alt 112749 16 + 113034 tttatcactacctgtg s panTro4.chr3 13863904 16 - 202329955 tttatcactacctgtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13845030 16 - 202140232 tttatcactacctgtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397410 16 - 123690457 tttatcactacctgtg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101131947 6 + 187378091 ----------CCTCAA i papAnu2.chr2 C 0 C 0 s canFam3.chr34 24825896 16 - 42124431 TTTATTGTTACCTGTG i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4994383 0 + 91754291 C e macFas5.chr2 103338674 47 - 192460366 I e rheMac3.chr2 103694000 0 + 192599291 C e calJac3.chr15 92432378 317 - 98464013 I a score=75003.000000 s hg38.chr3_KI270781v1_alt 112765 64 + 113034 ttttctacaataaatgtgttccttctctaCGTTACCAAAGAAATCAAACCCATTGCCCTGAACT s panTro4.chr3 13863920 64 - 202329955 ttttctacaataaatgtgttccttctctaCGTTACCAAAGAAATCAAACCCATTGCCCTGAACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13845046 64 - 202140232 ttttctacaataaatgtgttccttctctaCGTTACCAAAGAAATCAAACCCATTGCCCTGAACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397426 64 - 123690457 ttttctacaataaatgtgttccttctctaCGTTACCAAAGAAATCAAACCCATTGCCCTGAACT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101131953 21 + 187378091 ATTCCTAC----------TGCCTTCTC---------------------CCCA------------ i papAnu2.chr2 C 0 C 0 s calJac3.chr15 92432695 64 - 98464013 TTTTTTACAATAAATGTGTTCCTTCTCTATGTCACCAAAGACATCAAACCCATTGCCCTGAACT i calJac3.chr15 I 317 C 0 s canFam3.chr34 24825912 64 - 42124431 TTTTCCACAACAAATGTGTTCCTTCTCTACTTTGCCAAAGAAATCAAAGCCATTGGCCTAAACT i canFam3.chr34 C 0 C 0 e chlSab2.chr15 4994383 0 + 91754291 C e macFas5.chr2 103338674 47 - 192460366 I e rheMac3.chr2 103694000 0 + 192599291 C a score=43725.000000 s hg38.chr3_KI270781v1_alt 112829 29 + 113034 GCCTCAAATTCCTACTGCTTTCTCCCCCT s panTro4.chr3 13863984 29 - 202329955 GCCTCAAATTCCTACTGCTTTCTCCCCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 13845110 29 - 202140232 GCCTCAAATTCCTACTGCCTTCTCCCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 14397490 29 - 123690457 GCCTCAAATTCCTACTGCCTTTTCCCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 103694000 29 + 192599291 GCCTCAAATTCCTAATGCCTTCTCCTCAT i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 101131974 8 + 187378091 -------------------Tccccccc-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 4994383 28 + 91754291 GCCTCAAATTCCTACTGCCTTCTCCCCA- i chlSab2.chr15 C 0 C 0 s calJac3.chr15 92432759 29 - 98464013 GCTTCAAATTCCTATTGCCTTCTCCCCCT i calJac3.chr15 C 0 C 0 s canFam3.chr34 24825976 21 - 42124431 GCCTTGACCTCCTGTCTCCTT-------- i canFam3.chr34 C 0 C 0 e macFas5.chr2 103338674 47 - 192460366 I a score=593746.000000 s hg38.chr3_KI270781v1_alt 112858 176 + 113034 CCCTCCCTGAAGTCCACAACCGTCTCTGAACCCACATCCA--------TCCCTCCCTCTAGAATCAGAGCCTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCACCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCGCAGAGTT---GTCAGGAGTAAGACTTGTG s panTro4.chr3 13864013 176 - 202329955 CCCTCCCTGAAGTCCACAACCGTCTCTGAACCCACATCCA--------TCCCTCCCTCTAGAATCAGAGCCTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCACCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCGCAGAGTT---GTCAGGAGTAAGACTTGTG i panTro4.chr3 C 0 N 0 s ponAbe2.chr3 13845139 176 - 202140232 CCCTCCCTGAAGTCCACAACCATCTCTAAACCCACATCCA--------TCCCTCCCTCCAGAATCAGAGACTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTTCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCACAGAGTT---GTCAGGAGTAAGACTTGTG i ponAbe2.chr3 C 0 N 0 s nomLeu3.chr11 14397519 176 - 123690457 CCCTCCCTGAAGTCCACAACCATCTCTGAACCCACATCCA--------TCCCTCCTTCCAGAATCAGAGACTGGGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCTGAATACATTGCAGAGTT---GTCAGAAGTAAGACTTGTG i nomLeu3.chr11 C 0 N 0 s rheMac3.chr2 103694029 176 + 192599291 CCCTCCCTGGAGTCTGCAACCATCTCTGAACCCACATCCA--------TCCCTCCCTCCAGAATCAGAGACTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCACAGAGTT---GTCAGGAGTAAGACTTGTG i rheMac3.chr2 C 0 N 0 s macFas5.chr2 103338721 157 - 192460366 -------------------CCATCTCTGAACCCACATCCA--------TCCCTCCCTCCAGAATCAGAGACTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCACAGAGTT---GTCAGGAGTAAGACTTGTG i macFas5.chr2 I 47 N 0 s papAnu2.chr2 101131982 169 + 187378091 -------TGGAGTCCGCAACCATCTCTGAACCcacatcca--------tccctccctccagaATCAGAGACTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCACAGAGTT---GTCAGGAGTAAGACTTGTG i papAnu2.chr2 C 0 N 0 s chlSab2.chr15 4994411 180 + 91754291 CCCTCCCTAGAGTCCGCAACCATCTCTGAACCCACATCCA----TCCCTCCCTCCCTCCAGAATCAGAGACTGAGGCAAACTCTCCATCTGTGTTCTCACTGCCTCTCGCCGTGTCCTTGCTCTACCTGCTATGTAAAACTCATCTCCGAATACATCACAGAGTT---GTCAGGAGTAAGACTTGTG i chlSab2.chr15 C 0 N 0 s calJac3.chr15 92432788 170 - 98464013 CCCTCCCCGAAGCCCACAACTGTCTCTGAACCCACATCCA--------TCCCTCCCTCCAGAATCAGAGACTGAGGCGAACTCTT------TGTTCTCACTGCCTCTCACCATGTTCTTGCTCTACCCACTGTGTAAAATTCATCTCCGAATACCTCACAGAGTT---GTCAGGAGTAAGACTTGTG i calJac3.chr15 C 0 N 0 s canFam3.chr34 24825997 178 - 42124431 CTCTCTTCGAAGCCCACACCCACCTCTGTGTCCACATCCACACTCCCCCTCTTCCCTCCAAAATCAGAGACCAAGGCAAACTCTCC-----TTGTCTTACTGCCTTT----GTGCTCTTACTATACCTACTATGAAGAACTGACCTATTAATACATTACAGAGCTGTGGTCAGCAGCAATACCCCTG i canFam3.chr34 C 0 N 0